"Checked"	"Confidence"	"Identifying Node Type"	"Identifying Node"	"Search ID"	"Identifying Node No"	"PSM Ambiguity"	"Sequence"	"Annotated Sequence"	"Modifications"	"# Protein Groups"	"# Proteins"	"Master Protein Accessions"	"Master Protein Descriptions"	"Protein Accessions"	"Protein Descriptions"	"# Missed Cleavages"	"Charge"	"Original Precursor Charge"	"DeltaScore"	"DeltaCn"	"Rank"	"Search Engine Rank"	"Concatenated Rank"	"m/z [Da]"	"MH+ [Da]"	"Theo. MH+ [Da]"	"DeltaM [ppm]"	"Deltam/z [Da]"	"Ions Matched"	"Matched Ions"	"Total Ions"	"Intensity"	"Activation Type"	"MS Order"	"Isolation Interference [%]"	"Average Reporter S/N"	"Ion Inject Time [ms]"	"RT [min]"	"First Scan"	"Last Scan"	"Master Scan(s)"	"Spectrum File"	"File ID"	"Abundance: 126"	"Abundance: 127N"	"Abundance: 127C"	"Abundance: 128N"	"Abundance: 128C"	"Abundance: 129N"	"Abundance: 129C"	"Abundance: 130N"	"Abundance: 130C"	"Abundance: 131"	"Quan Info"	"Peptides Matched"	"Ions Score"	"Identity Strict"	"Identity Relaxed"	"Expectation Value"	"Homology Threshold"	"Percolator q-Value"	"Percolator PEP"	"Percolator SVMScore"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAALLR"	"[M].lPAALLR.[H]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P35434"	"ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1d PE=1 SV=2"	"P35434"	"ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"398.25714"	"795.50701"	"795.50870"	"-2.13"	"-0.00085"	"4/50"	"4"	"50"	"115123.429992676"	"HCD"	"MS2"	"12.16661"	"3.7"	"100.000"	"112.5482"	"40557"	"40557"	"40527"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.6"	""	"5.1"	""	"4.5"	""	"6.7"	""	"6.7"	"9.7"	"NoQuanLabels"	"10"	"21"	"16.000"	"13.000"	"0.00431489273883485"	""	"0.000264"	"0.006052"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAALLR"	"[M].lPAALLR.[H]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P35434"	"ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1d PE=1 SV=2"	"P35434"	"ATP synthase subunit delta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"398.25772"	"795.50817"	"795.50870"	"-0.67"	"-0.00027"	"4/50"	"4"	"50"	"165791.627563477"	"HCD"	"MS2"	"7.884351"	"4.1"	"100.000"	"112.4489"	"40503"	"40503"	"40473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"4.2"	""	"5.3"	""	"6.6"	""	"5.7"	"10.1"	"NoQuanLabels"	"10"	"34"	"16.000"	"13.000"	"0.00019185362274614"	""	"0.001103"	"0.009129"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"422.73691"	"844.46654"	"844.46756"	"-1.21"	"-0.00051"	"4/56"	"4"	"56"	"276456.240478516"	"HCD"	"MS2"	"32.53863"	"11.5"	"100.000"	"77.8586"	"26623"	"26623"	"26597"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"15.5"	""	"15.1"	""	"21.4"	""	"20.0"	"25.4"	"NoQuanLabels"	"248"	"24"	"30.000"	"23.000"	"0.0531400165292825"	""	"0.004114"	"0.04455"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQLFR"	"[M].aAPQLFR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"422.73715"	"844.46703"	"844.46756"	"-0.63"	"-0.00027"	"4/56"	"4"	"56"	"251769.345581055"	"HCD"	"MS2"	"34.125"	"11.2"	"100.000"	"77.9231"	"26676"	"26676"	"26654"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.9"	""	"15.2"	""	"13.3"	""	"21.5"	""	"21.8"	"19.8"	"NoQuanLabels"	"249"	"27"	"30.000"	"23.000"	"0.0275530291345902"	""	"0.004213"	"0.04614"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"423.24896"	"845.49065"	"845.49134"	"-0.81"	"-0.00034"	"5/48"	"5"	"48"	"378273.84362793"	"HCD"	"MS2"	"52.64186"	"5.7"	"100.000"	"114.0282"	"41137"	"41137"	"41113"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"6.1"	""	"7.6"	""	"12.2"	""	"7.5"	"14.7"	"NoQuanLabels"	"203"	"52"	"30.000"	"23.000"	"6.03206540994806E-05"	""	"0.0001991"	"0.003631"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLALISR"	"[-].mLALISR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"423.24905"	"845.49083"	"845.49134"	"-0.60"	"-0.00025"	"5/48"	"5"	"48"	"294359.575805664"	"HCD"	"MS2"	"36.04554"	"7.0"	"100.000"	"114.1163"	"41186"	"41186"	"41165"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.0"	""	"9.0"	""	"13.0"	""	"14.6"	""	"10.6"	"13.5"	"NoQuanLabels"	"203"	"42"	"30.000"	"23.000"	"0.000716912317576907"	""	"0.000885"	"0.007706"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"426.76831"	"852.52934"	"852.53016"	"-0.96"	"-0.00041"	"4/60"	"4"	"60"	"314142.94744873"	"HCD"	"MS2"	"22.8144"	"5.2"	"100.000"	"96.5143"	"34153"	"34153"	"34135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	""	"1.7"	""	"7.9"	""	"7.2"	""	"16.6"	"13.0"	"NoQuanLabels"	"23"	"30"	"20.000"	"13.000"	"0.00106831134479693"	""	"0.0001991"	"0.004326"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"426.76834"	"852.52941"	"852.53016"	"-0.89"	"-0.00038"	"5/60"	"5"	"60"	"1383220.27258301"	"HCD"	"MS2"	"2.990827"	"3.9"	"100.000"	"96.2282"	"34038"	"34038"	"34021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.3"	""	"4.8"	""	"6.1"	""	"5.0"	""	"5.5"	"11.6"	"NoQuanLabels"	"23"	"42"	"20.000"	"13.000"	"8.10397029312219E-05"	""	"0.0001991"	"0.003047"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"426.76840"	"852.52953"	"852.53016"	"-0.75"	"-0.00032"	"4/60"	"4"	"60"	"411280.244628906"	"HCD"	"MS2"	"23.15885"	"4.9"	"100.000"	"96.4954"	"34177"	"34177"	"34162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"3.5"	""	"8.0"	""	"5.7"	""	"15.8"	"7.7"	"NoQuanLabels"	"22"	"34"	"20.000"	"13.000"	"0.000398467298258369"	""	"0.0001991"	"0.004634"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"426.76843"	"852.52959"	"852.53016"	"-0.67"	"-0.00029"	"5/60"	"5"	"60"	"490053.782470703"	"HCD"	"MS2"	"13.62702"	"5.3"	"100.000"	"95.9415"	"33922"	"33922"	"33897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.2"	""	"6.7"	""	"8.8"	""	"7.9"	""	"15.3"	"6.4"	"NoQuanLabels"	"22"	"41"	"20.000"	"13.000"	"9.06551926514302E-05"	""	"0.0001686"	"0.001494"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"426.76846"	"852.52965"	"852.53016"	"-0.60"	"-0.00026"	"5/60"	"5"	"60"	"1437046.42803955"	"HCD"	"MS2"	"2.382023"	"4.7"	"100.000"	"96.2022"	"34059"	"34059"	"34047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.1"	"2.1"	"4.6"	""	"6.4"	""	"7.8"	""	"9.4"	"7.5"	"NoQuanLabels"	"22"	"39"	"20.000"	"13.000"	"0.000138801028804974"	""	"0.0001686"	"0.001707"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQILPIR"	"[M].aQILPIR.[F]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"426.76859"	"852.52989"	"852.53016"	"-0.32"	"-0.00014"	"5/60"	"5"	"60"	"343071.407897949"	"HCD"	"MS2"	"24.57166"	"4.7"	"100.000"	"95.9181"	"33945"	"33945"	"33922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.8"	""	"6.1"	""	"6.2"	""	"4.3"	""	"14.6"	"8.7"	"NoQuanLabels"	"22"	"41"	"20.000"	"13.000"	"8.85916285318973E-05"	""	"0.0001991"	"0.001979"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"433.73718"	"866.46709"	"866.46818"	"-1.26"	"-0.00055"	"6/48"	"6"	"48"	"939129.785583496"	"HCD"	"MS2"	"21.8639"	"97.2"	"100.000"	"22.3038"	"4180"	"4180"	"4164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.4"	""	"119.7"	""	"111.2"	""	"176.9"	""	"197.0"	"192.2"	""	"149"	"16"	"28.000"	"21.000"	"0.194606020902741"	"16"	"0.005266"	"0.06639"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"433.73718"	"866.46709"	"866.46818"	"-1.26"	"-0.00055"	"6/48"	"6"	"48"	"2151690.17114258"	"HCD"	"MS2"	"23.46661"	"209.0"	"100.000"	"21.9252"	"4077"	"4077"	"4068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.2"	""	"215.6"	""	"166.4"	""	"518.4"	""	"465.0"	"387.2"	""	"149"	"23"	"28.000"	"21.000"	"0.0407526892356009"	"18"	"0.001615"	"0.01323"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"433.73721"	"866.46715"	"866.46818"	"-1.19"	"-0.00052"	"9/48"	"9"	"48"	"891507.045349121"	"HCD"	"MS2"	"25.49331"	"101.1"	"100.000"	"22.2048"	"4183"	"4183"	"4170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.5"	""	"116.9"	""	"95.9"	""	"201.7"	"0.1"	"201.5"	"197.5"	""	"149"	"10"	"28.000"	"21.000"	"0.72972003912948"	"17"	"0.008601"	"0.1096"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSFGGR"	"[K].gGSFGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"433.73721"	"866.46715"	"866.46818"	"-1.19"	"-0.00052"	"6/48"	"6"	"48"	"2040738.16009521"	"HCD"	"MS2"	"19.34563"	"189.9"	"100.000"	"22.0128"	"4071"	"4071"	"4062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.3"	""	"184.9"	""	"156.9"	""	"480.4"	"1.6"	"424.8"	"352.7"	""	"149"	"18"	"28.000"	"21.000"	"0.113280790965071"	"18"	"0.001348"	"0.01075"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAGAR"	"[R].iAVAGAR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"443.78650"	"886.56572"	"886.56717"	"-1.63"	"-0.00072"	"5/50"	"5"	"50"	"5965217.06585693"	"HCD"	"MS2"	"6.994333"	"346.1"	"94.071"	"32.5387"	"8274"	"8274"	"8257"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"524.5"	""	"425.8"	""	"507.3"	""	"504.0"	"1.8"	"663.1"	"653.0"	""	"56"	"30"	"24.000"	"17.000"	"0.00309142013572581"	""	"0.0001991"	"0.004652"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAVGGR"	"[R].vVAVGGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"443.78668"	"886.56609"	"886.56717"	"-1.22"	"-0.00054"	"6/50"	"6"	"50"	"4003456.45446777"	"HCD"	"MS2"	"9.945767"	"255.6"	"100.000"	"31.5838"	"7853"	"7853"	"7833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"384.4"	""	"369.2"	""	"377.0"	""	"396.7"	""	"435.5"	"459.1"	""	"56"	"24"	"24.000"	"17.000"	"0.010003639468254"	""	"0.001103"	"0.00897"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVAGAR"	"[R].iAVAGAR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"Q8R431"	"Monoglyceride lipase OS=Rattus norvegicus OX=10116 GN=Mgll PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"443.78668"	"886.56609"	"886.56717"	"-1.22"	"-0.00054"	"5/50"	"5"	"50"	"7425807.03143311"	"HCD"	"MS2"	"3.641825"	"430.1"	"97.938"	"32.6074"	"8265"	"8265"	"8256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"683.0"	""	"576.1"	""	"609.6"	""	"623.1"	"9.3"	"777.1"	"795.2"	""	"56"	"30"	"24.000"	"17.000"	"0.00291848880230125"	""	"0.001718"	"0.01495"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAVGGR"	"[R].vVAVGGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"443.78687"	"886.56645"	"886.56717"	"-0.80"	"-0.00036"	"6/50"	"6"	"50"	"4281949.67657471"	"HCD"	"MS2"	"7.73354"	"258.0"	"100.000"	"31.4234"	"7826"	"7826"	"7808"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.3"	""	"385.7"	""	"389.9"	""	"373.1"	""	"443.3"	"451.7"	""	"56"	"23"	"24.000"	"17.000"	"0.0138726053425341"	""	"0.0004582"	"0.006454"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"444.27325"	"887.53923"	"887.53995"	"-0.81"	"-0.00036"	"6/50"	"6"	"50"	"4695568.65838623"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"87.3760"	"30500"	"30500"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.2"	""	"90.9"	""	"82.4"	""	"121.7"	""	"111.7"	"120.6"	""	"194"	"37"	"29.000"	"22.000"	"0.00215661059393186"	"17"	"0.00307"	"0.03409"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"444.27332"	"887.53935"	"887.53995"	"-0.67"	"-0.00030"	"6/50"	"6"	"50"	"8502488.03796387"	"HCD"	"MS2"	"0.1159606"	"89.6"	"84.196"	"87.9975"	"30715"	"30715"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.2"	""	"128.5"	""	"121.9"	""	"141.8"	""	"152.0"	"191.2"	""	"194"	"37"	"29.000"	"22.000"	"0.00216158209479219"	"16"	"0.003208"	"0.03456"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"444.27335"	"887.53942"	"887.53995"	"-0.60"	"-0.00027"	"6/50"	"6"	"50"	"6763412.67553711"	"HCD"	"MS2"	"0.3357909"	"88.3"	"100.000"	"87.9663"	"30740"	"30740"	"30726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.5"	""	"120.0"	""	"124.4"	""	"146.2"	""	"165.6"	"179.2"	""	"194"	"36"	"29.000"	"22.000"	"0.00219165269711435"	"15"	"0.002189"	"0.02021"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"444.27338"	"887.53948"	"887.53995"	"-0.53"	"-0.00024"	"6/50"	"6"	"50"	"16277335.9918213"	"HCD"	"MS2"	"0"	"111.3"	"52.374"	"87.7183"	"30604"	"30604"	"30588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.6"	""	"146.7"	""	"154.4"	""	"179.0"	"0.6"	"194.3"	"236.6"	""	"194"	"37"	"29.000"	"22.000"	"0.00213192407660128"	"16"	"0.004073"	"0.04388"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"444.27338"	"887.53948"	"887.53995"	"-0.53"	"-0.00024"	"6/50"	"6"	"50"	"4472240.80267334"	"HCD"	"MS2"	"0.4913481"	"61.9"	"100.000"	"87.4230"	"30484"	"30484"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.6"	""	"91.6"	""	"78.7"	""	"99.1"	""	"117.9"	"120.5"	""	"194"	"37"	"29.000"	"22.000"	"0.00215165052720621"	"16"	"0.004852"	"0.06021"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAELAA"	"[R].aLAELAA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"444.27338"	"887.53948"	"887.53995"	"-0.53"	"-0.00024"	"6/50"	"6"	"50"	"17665615.864624"	"HCD"	"MS2"	"0.1308377"	"103.0"	"44.406"	"87.6736"	"30621"	"30621"	"30609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.4"	""	"137.9"	""	"141.2"	""	"163.8"	""	"190.4"	"218.0"	""	"194"	"37"	"29.000"	"22.000"	"0.00212702078728993"	"16"	"0.009275"	"0.1199"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGPGAR"	"[K].fGGPGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"445.75537"	"890.50347"	"890.50457"	"-1.24"	"-0.00055"	"6/50"	"6"	"50"	"13256018.2484131"	"HCD"	"MS2"	"16.04992"	"446.8"	"58.655"	"28.5476"	"6675"	"6675"	"6667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"572.0"	""	"581.9"	""	"656.9"	""	"835.8"	""	"860.9"	"728.1"	""	"229"	"21"	"30.000"	"23.000"	"0.0990388266998169"	"16"	"0.007412"	"0.0946"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGPGAR"	"[K].fGGPGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"445.75562"	"890.50395"	"890.50457"	"-0.69"	"-0.00031"	"6/50"	"6"	"50"	"11089589.7091675"	"HCD"	"MS2"	"24.33887"	"507.6"	"75.888"	"28.7709"	"6723"	"6723"	"6710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"599.8"	""	"623.2"	""	"719.0"	""	"1004.7"	"0.3"	"1022.2"	"843.5"	""	"229"	"25"	"30.000"	"23.000"	"0.0389767377207646"	"18"	"0.00511"	"0.06517"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGPGAR"	"[K].fGGPGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"445.75638"	"890.50548"	"890.50457"	"1.03"	"0.00046"	"6/50"	"6"	"50"	"10240838.5400391"	"HCD"	"MS2"	"25.77093"	"610.3"	"100.000"	"28.4981"	"6613"	"6613"	"6595"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"824.0"	""	"836.7"	""	"904.7"	""	"1026.1"	""	"1166.1"	"1031.4"	""	"199"	"17"	"29.000"	"22.000"	"0.203621241354105"	"19"	"0.007601"	"0.0969"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTSAGR"	"[R].gLTSAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"445.76593"	"890.52458"	"890.52570"	"-1.25"	"-0.00056"	"5/50"	"5"	"50"	"4570013.18823242"	"HCD"	"MS2"	"35.83361"	"421.6"	"100.000"	"23.4925"	"4623"	"4623"	"4615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"653.9"	""	"561.7"	""	"584.9"	""	"763.0"	""	"687.8"	"743.2"	""	"144"	"19"	"28.000"	"21.000"	"0.0893989661466536"	""	"0.001718"	"0.01511"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTSAGR"	"[R].gLTSAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"445.76593"	"890.52458"	"890.52570"	"-1.25"	"-0.00056"	"6/50"	"6"	"50"	"5118215.90045166"	"HCD"	"MS2"	"37.42571"	"447.3"	"100.000"	"23.3886"	"4620"	"4620"	"4607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"700.3"	""	"625.4"	""	"621.6"	""	"791.1"	""	"721.8"	"778.9"	""	"144"	"21"	"28.000"	"21.000"	"0.0564069342791673"	""	"0.001488"	"0.01254"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINPVGA"	"[K].vINPVGA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"3"	"449.78122"	"898.55516"	"898.55593"	"-0.86"	"-0.00039"	"5/50"	"5"	"50"	"2449210.10656738"	"HCD"	"MS2"	"3.422167"	"32.5"	"100.000"	"71.0823"	"23910"	"23910"	"23893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.5"	""	"49.2"	""	"45.4"	""	"62.1"	""	"55.5"	"58.1"	""	"60"	"30"	"24.000"	"17.000"	"0.00306281845112304"	""	"0.001488"	"0.01282"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINPVGA"	"[K].vINPVGA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"3"	"449.78137"	"898.55547"	"898.55593"	"-0.52"	"-0.00023"	"4/50"	"4"	"50"	"2455422.61138916"	"HCD"	"MS2"	"5.579328"	"34.1"	"100.000"	"71.0318"	"23857"	"23857"	"23838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.0"	""	"43.7"	""	"56.3"	""	"60.4"	""	"62.5"	"62.2"	""	"60"	"28"	"24.000"	"17.000"	"0.00439664352286774"	""	"0.001217"	"0.009368"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVVSGGR"	"[K].vVVSGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"451.78394"	"902.56059"	"902.56208"	"-1.65"	"-0.00074"	"5/48"	"5"	"48"	"2985782.35925293"	"HCD"	"MS2"	"0"	"248.2"	"100.000"	"26.5708"	"5862"	"5862"	"5855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"352.8"	"3.6"	"347.7"	""	"358.5"	""	"396.5"	"16.1"	"440.8"	"434.2"	""	"105"	"22"	"27.000"	"20.000"	"0.0359053614822751"	""	"0.004751"	"0.05633"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGIGFR"	"[R].gAGIGFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P82450"	"Sialate O-acetylesterase OS=Rattus norvegicus OX=10116 GN=Siae PE=1 SV=2"	"P82450"	"Sialate O-acetylesterase OS=Rattus norvegicus OX=10116 GN=Siae PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.77112"	"906.53496"	"906.53587"	"-1.00"	"-0.00045"	"6/50"	"6"	"50"	"11884217.2543945"	"HCD"	"MS2"	"10.09516"	"655.2"	"93.912"	"41.5386"	"11882"	"11882"	"11864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1148.5"	""	"691.4"	""	"853.2"	""	"1127.4"	"0.9"	"1091.0"	"1289.7"	""	"100"	"19"	"26.000"	"20.000"	"0.0638219404405672"	"14"	"0.002628"	"0.02761"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGIGFR"	"[R].gAGIGFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P82450"	"Sialate O-acetylesterase OS=Rattus norvegicus OX=10116 GN=Siae PE=1 SV=2"	"P82450"	"Sialate O-acetylesterase OS=Rattus norvegicus OX=10116 GN=Siae PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.77112"	"906.53496"	"906.53587"	"-1.00"	"-0.00045"	"5/50"	"5"	"50"	"12135517.4134521"	"HCD"	"MS2"	"10.28611"	"672.1"	"93.465"	"41.4061"	"11863"	"11863"	"11846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1176.9"	""	"731.8"	""	"859.6"	""	"1187.8"	""	"1092.8"	"1324.9"	""	"100"	"22"	"26.000"	"20.000"	"0.0284426465421921"	"14"	"0.00212"	"0.01923"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAALVPR"	"[R].gAALVPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"456.79416"	"912.58104"	"912.58282"	"-1.95"	"-0.00089"	"6/50"	"6"	"50"	"3116996.64709473"	"HCD"	"MS2"	"8.621092"	"172.4"	"100.000"	"35.2408"	"9333"	"9333"	"9314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.6"	""	"231.8"	""	"260.6"	""	"272.3"	""	"300.0"	"306.0"	""	"57"	"17"	"24.000"	"17.000"	"0.0528256512673221"	"17"	"0.004751"	"0.05624"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAALVPR"	"[R].gAALVPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"456.79443"	"912.58159"	"912.58282"	"-1.34"	"-0.00061"	"6/50"	"6"	"50"	"3394649.40771484"	"HCD"	"MS2"	"0"	"180.0"	"100.000"	"35.1511"	"9334"	"9334"	"9317"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"253.8"	""	"255.5"	""	"268.5"	""	"293.5"	""	"325.3"	"307.7"	""	"57"	"17"	"24.000"	"17.000"	"0.0566037051446851"	""	"0.002588"	"0.02706"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAALVPR"	"[R].gAALVPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"456.79446"	"912.58165"	"912.58282"	"-1.28"	"-0.00058"	"6/50"	"6"	"50"	"4256122.95422363"	"HCD"	"MS2"	"15.75238"	"237.6"	"100.000"	"35.5437"	"9455"	"9455"	"9434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.6"	""	"303.3"	""	"342.8"	""	"388.0"	""	"458.9"	"432.1"	""	"57"	"17"	"24.000"	"17.000"	"0.0606519628105073"	""	"0.003001"	"0.03227"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAALVPR"	"[R].gAALVPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"456.79468"	"912.58208"	"912.58282"	"-0.81"	"-0.00037"	"5/50"	"5"	"50"	"3775218.45074463"	"HCD"	"MS2"	"27.34688"	"204.0"	"100.000"	"35.4609"	"9459"	"9459"	"9435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.6"	""	"271.4"	""	"267.1"	""	"355.7"	""	"377.2"	"379.6"	""	"57"	"16"	"24.000"	"17.000"	"0.0770628133771021"	""	"0.002286"	"0.0217"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAALGAR"	"[R].qAALGAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"458.28186"	"915.55644"	"915.55733"	"-0.97"	"-0.00044"	"5/62"	"5"	"62"	"2096558.11029053"	"HCD"	"MS2"	"3.76177"	"169.8"	"100.000"	"23.7465"	"4761"	"4761"	"4740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.5"	""	"214.4"	""	"216.5"	""	"299.2"	""	"308.5"	"334.0"	""	"230"	"26"	"30.000"	"23.000"	"0.0282291525303778"	""	"0.001615"	"0.01369"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALAEAR"	"[R].gALAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"458.77396"	"916.54064"	"916.54135"	"-0.77"	"-0.00036"	"4/48"	"4"	"48"	"13308634.0584106"	"HCD"	"MS2"	"34.19833"	"570.1"	"78.745"	"25.0615"	"5294"	"5294"	"5280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"746.6"	""	"743.3"	""	"759.1"	""	"952.1"	""	"1055.8"	"1156.5"	""	"246"	"25"	"30.000"	"23.000"	"0.0412957265518835"	"22"	"0.002189"	"0.02092"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALAEAR"	"[R].gALAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"458.77399"	"916.54070"	"916.54135"	"-0.71"	"-0.00032"	"4/48"	"4"	"48"	"15053554.9029541"	"HCD"	"MS2"	"33.93641"	"675.3"	"79.976"	"25.1698"	"5300"	"5300"	"5290"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"889.0"	""	"866.6"	""	"896.0"	""	"1143.6"	""	"1236.9"	"1378.1"	""	"245"	"25"	"30.000"	"23.000"	"0.0424752641804351"	"22"	"0.002189"	"0.0207"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].VADALAk.[A]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6102"	"0.0000"	"1"	"1"	"1"	"458.78607"	"916.56487"	"916.56650"	"-1.78"	"-0.00082"	"6/48"	"6"	"48"	"12385335.2589722"	"HCD"	"MS2"	"8.752299"	"415.6"	"65.157"	"30.9322"	"7593"	"7593"	"7583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"429.9"	""	"453.5"	""	"500.5"	""	"822.4"	"5.3"	"865.1"	"872.1"	""	"142"	"59"	"28.000"	"21.000"	"8.24628515826643E-06"	""	"0.002834"	"0.03019"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].VADALAk.[A]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6102"	"0.0000"	"1"	"1"	"1"	"458.78622"	"916.56517"	"916.56650"	"-1.45"	"-0.00066"	"6/48"	"6"	"48"	"11301186.1717529"	"HCD"	"MS2"	"6.882585"	"522.8"	"92.984"	"30.7963"	"7577"	"7577"	"7569"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"497.0"	""	"553.7"	""	"632.5"	""	"1046.7"	"11.9"	"1095.1"	"1132.6"	""	"142"	"59"	"28.000"	"21.000"	"8.20839691956391E-06"	""	"0.002628"	"0.02753"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"458.78635"	"916.56542"	"916.56650"	"-1.18"	"-0.00054"	"5/48"	"5"	"48"	"2844401.24005127"	"HCD"	"MS2"	"1.580363"	"123.2"	"100.000"	"70.6817"	"23715"	"23715"	"23696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.4"	""	"192.6"	""	"185.1"	""	"202.5"	""	"212.8"	"203.8"	""	"142"	"47"	"28.000"	"21.000"	"0.000137485959440209"	""	"0.001261"	"0.01008"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"458.78641"	"916.56554"	"916.56650"	"-1.05"	"-0.00048"	"5/48"	"5"	"48"	"3274480.80639648"	"HCD"	"MS2"	"2.986544"	"139.1"	"100.000"	"70.7433"	"23773"	"23773"	"23757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.4"	""	"211.9"	""	"212.0"	""	"221.6"	""	"213.3"	"238.7"	""	"142"	"47"	"28.000"	"21.000"	"0.000139398579655359"	""	"0.0009352"	"0.008149"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"458.78647"	"916.56566"	"916.56650"	"-0.91"	"-0.00042"	"5/48"	"5"	"48"	"5097791.95080566"	"HCD"	"MS2"	"0.9284981"	"216.5"	"100.000"	"71.0475"	"23895"	"23895"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.6"	""	"316.6"	""	"342.7"	""	"335.8"	""	"353.1"	"378.1"	""	"142"	"47"	"28.000"	"21.000"	"0.000133431493993032"	""	"0.001103"	"0.009044"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"458.78650"	"916.56572"	"916.56650"	"-0.85"	"-0.00039"	"5/48"	"5"	"48"	"1155738.33880615"	"HCD"	"MS2"	"15.74296"	"58.8"	"100.000"	"71.3426"	"24015"	"24015"	"23996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.6"	""	"77.9"	""	"83.3"	""	"86.4"	"3.1"	"104.7"	"113.6"	""	"142"	"17"	"28.000"	"21.000"	"0.128605146575992"	""	"0.003786"	"0.04099"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"458.78659"	"916.56590"	"916.56650"	"-0.65"	"-0.00030"	"5/48"	"5"	"48"	"1232368.01568604"	"HCD"	"MS2"	"18.10716"	"63.0"	"100.000"	"71.2902"	"23962"	"23962"	"23942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.7"	""	"87.1"	""	"89.6"	""	"110.1"	""	"110.3"	"110.3"	""	"142"	"23"	"28.000"	"21.000"	"0.0332857501323138"	""	"0.001951"	"0.01666"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLVGK"	"[M].aASLVGk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"458.78665"	"916.56603"	"916.56650"	"-0.51"	"-0.00024"	"5/48"	"5"	"48"	"5378530.26141357"	"HCD"	"MS2"	"0.4081008"	"216.6"	"100.000"	"70.9859"	"23839"	"23839"	"23826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"316.3"	""	"338.4"	""	"330.0"	""	"349.1"	""	"349.6"	"369.1"	""	"142"	"47"	"28.000"	"21.000"	"0.000133431493993032"	""	"0.002035"	"0.01826"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSALNR"	"[R].aGSALNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"459.27164"	"917.53600"	"917.53660"	"-0.65"	"-0.00030"	"6/50"	"6"	"50"	"10758398.7424927"	"HCD"	"MS2"	"39.44673"	"752.1"	"100.000"	"21.5806"	"3948"	"3948"	"3928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1131.3"	""	"978.4"	""	"1019.4"	""	"1148.3"	""	"1378.1"	"1482.5"	""	"200"	"21"	"30.000"	"23.000"	"0.0859013521505396"	"19"	"0.004213"	"0.04683"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSQALGL"	"[K].tSQALGL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P24485"	"Leukocyte surface antigen CD53 OS=Rattus norvegicus OX=10116 GN=Cd53 PE=1 SV=3"	"P24485"	"Leukocyte surface antigen CD53 OS=Rattus norvegicus OX=10116 GN=Cd53 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"459.77567"	"918.54405"	"918.54576"	"-1.86"	"-0.00085"	"4/50"	"4"	"50"	"719886.06652832"	"HCD"	"MS2"	"16.16618"	"30.2"	"100.000"	"70.2802"	"23586"	"23586"	"23563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.2"	""	"33.6"	""	"43.4"	""	"49.5"	"0.5"	"67.1"	"55.1"	""	"179"	"22"	"29.000"	"22.000"	"0.0595419474800558"	"16"	"0.002462"	"0.02311"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSQALGL"	"[K].tSQALGL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P24485"	"Leukocyte surface antigen CD53 OS=Rattus norvegicus OX=10116 GN=Cd53 PE=1 SV=3"	"P24485"	"Leukocyte surface antigen CD53 OS=Rattus norvegicus OX=10116 GN=Cd53 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"459.77609"	"918.54491"	"918.54576"	"-0.93"	"-0.00043"	"4/50"	"4"	"50"	"776811.90045166"	"HCD"	"MS2"	"8.369431"	"32.5"	"100.000"	"70.1770"	"23511"	"23511"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"41.1"	""	"44.8"	""	"57.5"	"2.3"	"63.4"	"63.0"	""	"188"	"24"	"29.000"	"22.000"	"0.0355736029634068"	"16"	"0.002462"	"0.02297"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSVFR"	"[K].gAGSVFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"461.76831"	"922.52934"	"922.53078"	"-1.56"	"-0.00072"	"9/48"	"9"	"48"	"9865436.87628174"	"HCD"	"MS2"	"13.56541"	"496.5"	"88.118"	"32.8899"	"8417"	"8417"	"8404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"664.3"	""	"695.5"	""	"690.3"	""	"921.3"	""	"932.0"	"802.0"	""	"108"	"20"	"27.000"	"20.000"	"0.0484611549030404"	"16"	"0.00329"	"0.035"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSVFR"	"[K].gAGSVFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"461.76852"	"922.52977"	"922.53078"	"-1.09"	"-0.00050"	"5/48"	"5"	"48"	"9691589.95678711"	"HCD"	"MS2"	"11.71255"	"591.8"	"100.000"	"32.9869"	"8420"	"8420"	"8403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"783.2"	""	"816.1"	""	"875.7"	""	"1094.8"	""	"1101.3"	"939.1"	""	"108"	"20"	"27.000"	"20.000"	"0.0520467672756944"	"16"	"0.002525"	"0.02473"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPPAAR"	"[R].vSPPAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"463.78375"	"926.56023"	"926.56208"	"-2.00"	"-0.00093"	"6/48"	"6"	"48"	"4194080.44702148"	"HCD"	"MS2"	"37.75536"	"280.2"	"100.000"	"26.0479"	"5692"	"5692"	"5671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.5"	""	"382.4"	""	"378.0"	""	"443.2"	""	"552.0"	"583.0"	""	"79"	"19"	"25.000"	"18.000"	"0.0455614036839332"	"18"	"0.0009352"	"0.008008"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPPAAR"	"[R].vSPPAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"P16257"	"Translocator protein OS=Rattus norvegicus OX=10116 GN=Tspo PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"463.78427"	"926.56127"	"926.56208"	"-0.88"	"-0.00041"	"6/48"	"6"	"48"	"3849418.09313965"	"HCD"	"MS2"	"23.79333"	"239.5"	"100.000"	"26.2363"	"5728"	"5728"	"5710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.0"	""	"317.1"	""	"331.5"	""	"403.6"	""	"459.5"	"496.8"	""	"59"	"24"	"24.000"	"17.000"	"0.0131771659684534"	"17"	"0.0009352"	"0.00786"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGVSGR"	"[R].nLGVSGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"466.27954"	"931.55181"	"931.55225"	"-0.47"	"-0.00022"	"5/60"	"5"	"60"	"4702989.31152344"	"HCD"	"MS2"	"22.72144"	"327.6"	"100.000"	"28.0002"	"6415"	"6415"	"6402"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.2"	""	"375.8"	""	"418.3"	""	"571.8"	"0.2"	"681.7"	"698.2"	""	"189"	"20"	"29.000"	"22.000"	"0.0927751806153886"	""	"0.003317"	"0.0367"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGVSGR"	"[R].nLGVSGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"466.27954"	"931.55181"	"931.55225"	"-0.47"	"-0.00022"	"6/60"	"6"	"60"	"12154054.0817261"	"HCD"	"MS2"	"9.198896"	"682.9"	"100.000"	"27.5863"	"6288"	"6288"	"6268"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"832.4"	""	"892.4"	""	"901.4"	""	"1169.5"	""	"1349.5"	"1338.0"	""	"189"	"23"	"29.000"	"22.000"	"0.0466049244737415"	""	"0.002628"	"0.02781"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGVSGR"	"[R].nLGVSGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"466.27979"	"931.55229"	"931.55225"	"0.05"	"0.00002"	"5/60"	"5"	"60"	"4759587.85302734"	"HCD"	"MS2"	"34.64096"	"314.3"	"100.000"	"27.7199"	"6303"	"6303"	"6287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"399.0"	""	"390.3"	""	"385.1"	""	"555.1"	""	"631.9"	"622.5"	""	"189"	"23"	"29.000"	"22.000"	"0.0448158676070932"	""	"0.00212"	"0.01904"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGEASR"	"[R].iAGEASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"466.77106"	"932.53484"	"932.53626"	"-1.53"	"-0.00071"	"5/52"	"5"	"52"	"2559731.43652344"	"HCD"	"MS2"	"46.33136"	"223.0"	"100.000"	"23.7748"	"4735"	"4735"	"4712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.8"	""	"238.2"	""	"263.9"	""	"362.2"	""	"523.4"	"504.6"	""	"239"	"23"	"30.000"	"23.000"	"0.0585285689145293"	"22"	"0.001615"	"0.01336"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAGEASR"	"[R].iAGEASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"466.77124"	"932.53520"	"932.53626"	"-1.13"	"-0.00053"	"5/52"	"5"	"52"	"2607632.62567139"	"HCD"	"MS2"	"27.21374"	"229.9"	"100.000"	"23.7075"	"4745"	"4745"	"4724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"244.6"	""	"250.9"	""	"263.3"	""	"398.6"	""	"534.3"	"498.6"	""	"241"	"19"	"30.000"	"23.000"	"0.169428726657655"	""	"0.00394"	"0.04316"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISSAVR"	"[K].aISSAVR.[KQ]"	"N-Term(TMT6plex)"	"1"	"2"	"P19112"	"Fructose-1,6-bisphosphatase 1 OS=Rattus norvegicus OX=10116 GN=Fbp1 PE=1 SV=2"	"Q9Z1N1; P19112"	"Fructose-1,6-bisphosphatase isozyme 2 OS=Rattus norvegicus OX=10116 GN=Fbp2 PE=1 SV=1; Fructose-1,6-bisphosphatase 1 OS=Rattus norvegicus OX=10116 GN=Fbp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"466.78970"	"932.57213"	"932.57265"	"-0.55"	"-0.00026"	"6/50"	"6"	"50"	"3623069.15161133"	"HCD"	"MS2"	"53.44197"	"304.3"	"100.000"	"28.3455"	"6596"	"6596"	"6575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"478.5"	""	"427.3"	""	"438.8"	""	"530.3"	"4.5"	"464.2"	"533.4"	""	"168"	"13"	"29.000"	"22.000"	"0.391092318559286"	"13"	"0.005266"	"0.06736"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISSAVR"	"[K].aISSAVR.[KQ]"	"N-Term(TMT6plex)"	"1"	"2"	"P19112"	"Fructose-1,6-bisphosphatase 1 OS=Rattus norvegicus OX=10116 GN=Fbp1 PE=1 SV=2"	"Q9Z1N1; P19112"	"Fructose-1,6-bisphosphatase isozyme 2 OS=Rattus norvegicus OX=10116 GN=Fbp2 PE=1 SV=1; Fructose-1,6-bisphosphatase 1 OS=Rattus norvegicus OX=10116 GN=Fbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"466.78995"	"932.57262"	"932.57265"	"-0.03"	"-0.00001"	"6/50"	"6"	"50"	"3330661.96673584"	"HCD"	"MS2"	"41.36353"	"273.0"	"100.000"	"28.5783"	"6646"	"6646"	"6624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"423.9"	""	"362.1"	""	"392.7"	""	"463.0"	"6.6"	"435.2"	"498.9"	""	"166"	"13"	"29.000"	"22.000"	"0.461400533534435"	"14"	"0.00452"	"0.05289"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMSIGAR"	"[R].aMSIGAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"467.77011"	"934.53295"	"934.53415"	"-1.29"	"-0.00060"	"6/48"	"6"	"48"	"3728597.56262207"	"HCD"	"MS2"	"26.67844"	"288.9"	"100.000"	"33.9033"	"8793"	"8793"	"8771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"377.1"	""	"369.5"	""	"370.1"	""	"440.1"	""	"617.7"	"573.1"	""	"217"	"17"	"30.000"	"23.000"	"0.21598805728011"	"23"	"0.002525"	"0.02398"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMSIGAR"	"[R].aMSIGAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"467.77036"	"934.53343"	"934.53415"	"-0.77"	"-0.00036"	"5/48"	"5"	"48"	"3225000.65112305"	"HCD"	"MS2"	"30.19895"	"260.9"	"100.000"	"33.8204"	"8797"	"8797"	"8777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"349.6"	""	"315.7"	""	"335.6"	""	"398.6"	"1.5"	"555.7"	"520.8"	""	"233"	"16"	"30.000"	"23.000"	"0.275629644757091"	"23"	"0.001951"	"0.01664"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMSIGAR"	"[R].aMSIGAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"467.77039"	"934.53349"	"934.53415"	"-0.70"	"-0.00033"	"5/48"	"5"	"48"	"16947106.0280762"	"HCD"	"MS2"	"49.77702"	"581.3"	"52.452"	"33.5124"	"8671"	"8671"	"8649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"837.5"	""	"759.4"	""	"803.4"	""	"875.4"	""	"1090.6"	"1155.2"	""	"233"	"23"	"30.000"	"23.000"	"0.063434559056142"	"21"	"0.003357"	"0.03798"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMSIGAR"	"[R].aMSIGAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"467.77045"	"934.53362"	"934.53415"	"-0.57"	"-0.00027"	"6/48"	"6"	"48"	"12953732.6176758"	"HCD"	"MS2"	"52.07381"	"881.9"	"100.000"	"33.6046"	"8671"	"8671"	"8652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1254.8"	""	"1168.8"	""	"1230.7"	""	"1284.1"	""	"1693.9"	"1738.6"	""	"233"	"20"	"30.000"	"23.000"	"0.126860355873345"	"20"	"0.002525"	"0.02384"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLCYNR"	"[M].aLLcYNR.[G]"	"N-Term(Prot)(Acetyl); C4(Methylthio)"	"1"	"1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"470.72180"	"940.43633"	"940.43792"	"-1.69"	"-0.00080"	"4/52"	"4"	"52"	"210936.808227539"	"HCD"	"MS2"	"7.464868"	"4.5"	"100.000"	"108.4203"	"38929"	"38929"	"38921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.1"	""	"5.0"	""	"4.7"	""	"9.3"	""	"11.5"	"7.7"	"NoQuanLabels"	"122"	"30"	"27.000"	"20.000"	"0.0062420872529126"	"15"	"0.0009352"	"0.008325"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLCYNR"	"[M].aLLcYNR.[G]"	"N-Term(Prot)(Acetyl); C4(Methylthio)"	"1"	"1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"470.72250"	"940.43773"	"940.43792"	"-0.20"	"-0.00009"	"5/52"	"5"	"52"	"277675.511352539"	"HCD"	"MS2"	"6.324211"	"4.3"	"100.000"	"108.2210"	"38836"	"38836"	"38828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.5"	""	"6.0"	""	"6.0"	""	"8.8"	""	"8.2"	"7.3"	"NoQuanLabels"	"138"	"38"	"28.000"	"21.000"	"0.00103240260270516"	"15"	"0.00192"	"0.01609"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNSVAI"	"[R].iPNSVAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.79443"	"942.58159"	"942.58215"	"-0.59"	"-0.00028"	"5/48"	"5"	"48"	"1765912.87792969"	"HCD"	"MS2"	"20.77942"	"34.6"	"100.000"	"98.7095"	"35071"	"35071"	"35053"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.3"	""	"33.8"	""	"38.7"	""	"61.6"	"1.7"	"77.5"	"79.4"	""	"147"	"22"	"28.000"	"21.000"	"0.0506159437813043"	"14"	"0.004213"	"0.04638"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPNSVAI"	"[R].iPNSVAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.79471"	"942.58214"	"942.58215"	"-0.01"	"0.00000"	"5/48"	"5"	"48"	"1727960.19177246"	"HCD"	"MS2"	"17.1733"	"35.1"	"100.000"	"98.7044"	"35039"	"35039"	"35026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"34.4"	""	"42.1"	""	"63.2"	""	"83.9"	"80.4"	""	"142"	"20"	"28.000"	"21.000"	"0.0734950938342334"	"14"	"0.003818"	"0.04173"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYGFGG"	"[R].tLYGFGG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"472.25757"	"943.50786"	"943.50865"	"-0.84"	"-0.00039"	"4/50"	"4"	"50"	"961440.163208008"	"HCD"	"MS2"	"35.90701"	"29.9"	"100.000"	"98.4343"	"34930"	"34930"	"34911"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"27.5"	""	"32.9"	""	"58.0"	""	"73.4"	"78.6"	""	"180"	"22"	"29.000"	"22.000"	"0.0527524348062626"	"14"	"0.00511"	"0.0647"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLYGFGG"	"[R].tLYGFGG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"472.25833"	"943.50939"	"943.50865"	"0.78"	"0.00037"	"4/50"	"4"	"50"	"1063706.18414307"	"HCD"	"MS2"	"35.53582"	"31.8"	"100.000"	"98.4740"	"34976"	"34976"	"34951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.7"	""	"28.8"	""	"37.3"	""	"59.6"	""	"81.8"	"74.5"	""	"173"	"25"	"29.000"	"22.000"	"0.0271029215153298"	"14"	"0.008522"	"0.1084"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSGPVR"	"[K].aQSGPVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"472.27921"	"943.55113"	"943.55225"	"-1.18"	"-0.00056"	"5/58"	"5"	"58"	"4051479.23950195"	"HCD"	"MS2"	"12.34855"	"247.6"	"100.000"	"19.8039"	"3244"	"3244"	"3233"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"377.6"	""	"314.1"	""	"360.4"	""	"402.9"	""	"453.9"	"437.0"	""	"267"	"25"	"31.000"	"24.000"	"0.0397631943328797"	"20"	"0.002834"	"0.03055"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSGPVR"	"[K].aQSGPVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"472.27936"	"943.55144"	"943.55225"	"-0.85"	"-0.00040"	"5/58"	"5"	"58"	"4278701.77832031"	"HCD"	"MS2"	"0"	"270.9"	"100.000"	"19.8162"	"3210"	"3210"	"3195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"409.8"	""	"346.1"	""	"383.1"	""	"451.7"	""	"506.5"	"471.8"	""	"267"	"26"	"31.000"	"24.000"	"0.0302330015063674"	"18"	"0.001951"	"0.01689"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALNAVR"	"[R].aALNAVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"472.29730"	"943.58733"	"943.58863"	"-1.38"	"-0.00065"	"4/56"	"4"	"56"	"4876221.96459961"	"HCD"	"MS2"	"5.663752"	"256.7"	"100.000"	"32.4766"	"8214"	"8214"	"8192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.2"	""	"308.9"	""	"331.1"	""	"454.1"	""	"511.1"	"507.7"	""	"108"	"29"	"27.000"	"20.000"	"0.00726764591190212"	""	"0.001615"	"0.0148"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALNAVR"	"[R].aALNAVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"472.29736"	"943.58745"	"943.58863"	"-1.25"	"-0.00059"	"5/56"	"5"	"56"	"1829829.27087402"	"HCD"	"MS2"	"18.83374"	"130.1"	"100.000"	"32.6719"	"8329"	"8329"	"8299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.1"	""	"154.4"	""	"182.3"	""	"221.1"	"6.4"	"244.3"	"250.7"	""	"107"	"21"	"27.000"	"20.000"	"0.0446019433771504"	"18"	"0.002559"	"0.02579"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALNAVR"	"[R].aALNAVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"472.29758"	"943.58788"	"943.58863"	"-0.80"	"-0.00038"	"5/56"	"5"	"56"	"3945739.44000244"	"HCD"	"MS2"	"27.28914"	"220.6"	"100.000"	"32.3483"	"8199"	"8199"	"8182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.1"	""	"289.5"	""	"280.6"	""	"390.9"	""	"436.9"	"430.1"	""	"107"	"30"	"27.000"	"20.000"	"0.00498142713375289"	"19"	"0.001217"	"0.009308"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVGDGR"	"[R].lVVGDGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"472.78894"	"944.57060"	"944.57265"	"-2.16"	"-0.00102"	"4/48"	"4"	"48"	"6783417.61309814"	"HCD"	"MS2"	"44.34016"	"430.2"	"100.000"	"39.2532"	"10962"	"10962"	"10945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"589.6"	""	"535.5"	""	"601.2"	""	"694.8"	""	"810.6"	"854.6"	""	"257"	"24"	"31.000"	"24.000"	"0.046655530037958"	"20"	"0.001488"	"0.01228"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVGDGR"	"[R].lVVGDGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"472.78894"	"944.57060"	"944.57265"	"-2.16"	"-0.00102"	"4/48"	"4"	"48"	"7238069.51397705"	"HCD"	"MS2"	"29.24186"	"461.7"	"100.000"	"39.1683"	"10962"	"10962"	"10950"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"619.7"	""	"550.0"	""	"647.3"	""	"765.1"	""	"887.7"	"911.1"	""	"257"	"24"	"31.000"	"24.000"	"0.0468708821799406"	"20"	"0.002189"	"0.02111"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVADAIR"	"[K].aVADAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.1364"	"0.0000"	"1"	"1"	"1"	"472.78897"	"944.57067"	"944.57265"	"-2.10"	"-0.00099"	"6/48"	"6"	"48"	"5054248.19750977"	"HCD"	"MS2"	"32.14817"	"301.5"	"100.000"	"34.9383"	"9211"	"9211"	"9199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"399.4"	""	"384.3"	""	"362.8"	""	"523.6"	""	"615.0"	"575.9"	""	"257"	"22"	"31.000"	"24.000"	"0.0753187541400527"	""	"0.002525"	"0.02372"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AVADAIR"	"[K].aVADAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"5"	"472.78912"	"944.57097"	"944.57265"	"-1.77"	"-0.00084"	"5/48"	"5"	"48"	"5295390.35345459"	"HCD"	"MS2"	"49.19618"	"341.8"	"100.000"	"35.2362"	"9331"	"9331"	"9314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"505.2"	""	"472.8"	""	"470.2"	""	"467.7"	""	"672.1"	"676.6"	""	"257"	"16"	"31.000"	"24.000"	"0.340332267810961"	""	"0.00212"	"0.01895"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVADAIR"	"[K].aVADAIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.1600"	"0.0000"	"1"	"1"	"1"	"472.78961"	"944.57195"	"944.57265"	"-0.74"	"-0.00035"	"5/48"	"5"	"48"	"5148476.74249268"	"HCD"	"MS2"	"31.06276"	"310.7"	"100.000"	"34.8533"	"9214"	"9214"	"9201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"412.1"	""	"384.3"	""	"369.7"	""	"561.7"	"0.1"	"644.1"	"576.6"	""	"197"	"25"	"29.000"	"22.000"	"0.0300217656478356"	""	"0.001615"	"0.01325"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.77072"	"948.53417"	"948.53520"	"-1.09"	"-0.00052"	"5/48"	"5"	"48"	"593455.388183594"	"HCD"	"MS2"	"27.17075"	"13.8"	"100.000"	"97.2988"	"34471"	"34471"	"34450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"16.4"	""	"20.1"	""	"24.8"	""	"26.4"	"27.0"	""	"277"	"16"	"31.000"	"24.000"	"0.371064812987436"	"13"	"0.003357"	"0.0379"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.77081"	"948.53435"	"948.53520"	"-0.89"	"-0.00042"	"6/48"	"6"	"48"	"4143615.17266846"	"HCD"	"MS2"	"3.714722"	"41.7"	"100.000"	"97.6594"	"34648"	"34648"	"34631"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.6"	""	"45.5"	""	"48.8"	""	"78.5"	""	"79.5"	"90.0"	""	"277"	"29"	"31.000"	"24.000"	"0.0181321696335418"	"14"	"0.004893"	"0.06052"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"474.77109"	"948.53490"	"948.53520"	"-0.32"	"-0.00015"	"6/48"	"6"	"48"	"863060.739685059"	"HCD"	"MS2"	"15.35254"	"17.1"	"100.000"	"97.3776"	"34533"	"34533"	"34518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"23.3"	""	"21.1"	""	"30.8"	""	"31.8"	"31.5"	""	"275"	"31"	"31.000"	"24.000"	"0.0120033563153365"	"15"	"0.000885"	"0.007669"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.77109"	"948.53490"	"948.53520"	"-0.32"	"-0.00015"	"6/48"	"6"	"48"	"4011218.98748779"	"HCD"	"MS2"	"4.839089"	"37.9"	"100.000"	"97.6176"	"34600"	"34600"	"34583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.0"	""	"38.9"	""	"48.9"	""	"67.1"	""	"85.1"	"81.2"	""	"275"	"30"	"31.000"	"24.000"	"0.0147333904470171"	"14"	"0.00455"	"0.05324"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.77112"	"948.53496"	"948.53520"	"-0.25"	"-0.00012"	"6/48"	"6"	"48"	"890297.627319336"	"HCD"	"MS2"	"8.079373"	"17.3"	"100.000"	"97.9317"	"34727"	"34727"	"34707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"16.9"	""	"22.5"	""	"39.5"	""	"29.7"	"34.1"	""	"275"	"29"	"31.000"	"24.000"	"0.0161920821359111"	"14"	"0.001453"	"0.01186"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPSAFL"	"[R].aNPSAFL.[-]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U1V9"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1"	"Q5U1V9; Q5FVL6"	"Tetraspanin-31 OS=Rattus norvegicus OX=10116 GN=Tspan31 PE=2 SV=1; Tetraspanin-13 OS=Rattus norvegicus OX=10116 GN=Tspan13 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.77127"	"948.53526"	"948.53520"	"0.07"	"0.00003"	"4/48"	"4"	"48"	"855760.772766113"	"HCD"	"MS2"	"8.402228"	"16.2"	"100.000"	"97.9731"	"34775"	"34775"	"34757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"15.2"	""	"24.5"	""	"30.2"	""	"25.0"	"36.1"	""	"275"	"18"	"31.000"	"24.000"	"0.197834804510179"	"14"	"0.005426"	"0.06876"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPLPPQ"	"[R].gIPLPPQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQL2"	"CCR4-NOT transcription complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Cnot9 PE=1 SV=1"	"Q5PQL2"	"CCR4-NOT transcription complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Cnot9 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.79745"	"950.58763"	"950.58723"	"0.42"	"0.00020"	"5/50"	"5"	"50"	"755927.011535645"	"HCD"	"MS2"	"54.26069"	"21.7"	"100.000"	"88.6134"	"31002"	"31002"	"30978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.5"	""	"26.1"	""	"24.5"	""	"50.5"	""	"48.8"	"35.3"	""	"50"	"7"	"23.000"	"16.000"	"0.550731615763364"	"13"	"0.004114"	"0.04482"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPLPPQ"	"[R].gIPLPPQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQL2"	"CCR4-NOT transcription complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Cnot9 PE=1 SV=1"	"Q5PQL2"	"CCR4-NOT transcription complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Cnot9 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.79745"	"950.58763"	"950.58723"	"0.42"	"0.00020"	"5/50"	"5"	"50"	"731262.995544434"	"HCD"	"MS2"	"47.97953"	"20.6"	"100.000"	"88.7231"	"31007"	"31007"	"30982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.1"	""	"25.0"	""	"26.3"	""	"43.9"	"1.6"	"38.2"	"35.4"	""	"50"	"5"	"23.000"	"16.000"	"0.749790629746912"	"13"	"0.005956"	"0.07297"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.27060"	"951.53392"	"951.53486"	"-0.99"	"-0.00047"	"6/50"	"6"	"50"	"3800644.06896973"	"HCD"	"MS2"	"8.256683"	"73.9"	"100.000"	"92.0454"	"32383"	"32383"	"32371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.6"	""	"100.4"	""	"114.3"	""	"119.1"	""	"139.5"	"153.3"	""	"151"	"54"	"28.000"	"21.000"	"2.90366795444242E-05"	"16"	"0.0005161"	"0.006861"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.27081"	"951.53435"	"951.53486"	"-0.54"	"-0.00026"	"6/50"	"6"	"50"	"1929970.93933105"	"HCD"	"MS2"	"32.76089"	"32.8"	"100.000"	"91.8661"	"32274"	"32274"	"32256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.4"	""	"50.5"	""	"45.4"	""	"54.4"	""	"61.4"	"68.5"	""	"151"	"50"	"28.000"	"21.000"	"7.76152305085487E-05"	"16"	"0.0001686"	"0.001511"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.27084"	"951.53441"	"951.53486"	"-0.48"	"-0.00023"	"6/50"	"6"	"50"	"1187883.64129639"	"HCD"	"MS2"	"22.51225"	"34.3"	"100.000"	"92.3380"	"32501"	"32501"	"32481"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.6"	""	"47.3"	""	"45.5"	""	"64.0"	""	"67.0"	"66.8"	""	"151"	"53"	"28.000"	"21.000"	"3.90793158122679E-05"	"16"	"0.0001991"	"0.004513"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.27103"	"951.53478"	"951.53486"	"-0.09"	"-0.00004"	"6/50"	"6"	"50"	"1567503.68493652"	"HCD"	"MS2"	"49.13807"	"27.5"	"100.000"	"91.7711"	"32271"	"32271"	"32251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"37.1"	""	"39.3"	""	"44.4"	"0.5"	"53.8"	"56.1"	""	"151"	"53"	"28.000"	"21.000"	"3.58878095586818E-05"	"16"	"0.0001991"	"0.003799"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVGYDV"	"[R].gIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.27139"	"951.53551"	"951.53486"	"0.68"	"0.00032"	"6/50"	"6"	"50"	"3193036.26104736"	"HCD"	"MS2"	"6.044147"	"61.3"	"100.000"	"92.1545"	"32392"	"32392"	"32379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.7"	""	"77.1"	""	"89.1"	""	"99.0"	""	"125.3"	"128.6"	""	"148"	"50"	"28.000"	"21.000"	"6.89019827846194E-05"	"16"	"0.000885"	"0.007693"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGIIPR"	"[K].aPGIIPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.81018"	"952.61308"	"952.61412"	"-1.08"	"-0.00052"	"6/50"	"6"	"50"	"3297266.93206787"	"HCD"	"MS2"	"24.63486"	"168.4"	"100.000"	"46.6863"	"13972"	"13972"	"13962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.5"	""	"231.8"	""	"247.2"	""	"273.0"	""	"301.4"	"322.8"	""	"31"	"20"	"21.000"	"14.000"	"0.0140065668426957"	"14"	"0.0005778"	"0.007119"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGIIPR"	"[K].aPGIIPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.81046"	"952.61363"	"952.61412"	"-0.51"	"-0.00024"	"6/50"	"6"	"50"	"18102825.510376"	"HCD"	"MS2"	"31.17575"	"573.7"	"77.083"	"46.4169"	"13868"	"13868"	"13862"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"704.8"	""	"808.0"	""	"858.6"	""	"940.9"	""	"1069.7"	"1071.3"	""	"31"	"18"	"21.000"	"14.000"	"0.0228208437877071"	"14"	"0.001951"	"0.01656"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGIIPR"	"[K].aPGIIPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.81073"	"952.61418"	"952.61412"	"0.07"	"0.00003"	"6/50"	"6"	"50"	"11792916.3473511"	"HCD"	"MS2"	"30.31345"	"519.2"	"98.618"	"46.1990"	"13814"	"13814"	"13801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"644.0"	""	"765.5"	""	"743.4"	""	"828.5"	""	"977.7"	"972.8"	""	"31"	"18"	"21.000"	"14.000"	"0.0223527879486355"	"14"	"0.001453"	"0.01182"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVIPIR"	"[R].gAVIPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.81824"	"954.62920"	"954.62977"	"-0.60"	"-0.00028"	"6/50"	"6"	"50"	"2450022.88360596"	"HCD"	"MS2"	"32.93174"	"131.0"	"100.000"	"50.5910"	"15560"	"15560"	"15542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.7"	""	"172.2"	""	"194.5"	""	"196.4"	""	"240.0"	"237.3"	""	"32"	"19"	"22.000"	"15.000"	"0.0186689538729754"	"14"	"0.0007633"	"0.007345"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVIPIR"	"[R].gAVIPIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"477.81830"	"954.62932"	"954.62977"	"-0.47"	"-0.00022"	"6/50"	"6"	"50"	"2415720.73547363"	"HCD"	"MS2"	"32.01685"	"126.0"	"100.000"	"50.2449"	"15454"	"15454"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.3"	""	"149.1"	""	"203.4"	""	"200.5"	""	"224.7"	"227.2"	""	"32"	"19"	"22.000"	"15.000"	"0.0207548683357433"	"14"	"0.001951"	"0.01697"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAQGIR"	"[R].iAAQGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"479.30487"	"957.60246"	"957.60428"	"-1.90"	"-0.00091"	"5/56"	"5"	"56"	"11263088.7130737"	"HCD"	"MS2"	"48.39193"	"566.6"	"100.000"	"34.7617"	"9141"	"9141"	"9124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"828.4"	""	"846.5"	""	"836.0"	""	"838.6"	""	"992.1"	"1030.0"	""	"175"	"19"	"29.000"	"22.000"	"0.0988571425338698"	""	"0.003357"	"0.03759"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAQGIR"	"[R].iAAQGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"479.30533"	"957.60338"	"957.60428"	"-0.94"	"-0.00045"	"5/56"	"5"	"56"	"12463986.7182617"	"HCD"	"MS2"	"31.88655"	"607.6"	"100.000"	"34.6766"	"9143"	"9143"	"9120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"892.3"	""	"866.1"	""	"894.1"	""	"909.1"	""	"1114.4"	"1087.6"	""	"132"	"19"	"28.000"	"21.000"	"0.0768323179410925"	""	"0.00329"	"0.03555"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLQAAR"	"[R].aVLQAAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"479.30582"	"957.60436"	"957.60428"	"0.08"	"0.00004"	"6/56"	"6"	"56"	"2867079.8427124"	"HCD"	"MS2"	"16.40967"	"165.1"	"100.000"	"32.3252"	"8189"	"8189"	"8174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.4"	""	"206.4"	""	"215.0"	""	"273.6"	"2.3"	"334.4"	"332.3"	""	"132"	"18"	"28.000"	"21.000"	"0.106793282484442"	"16"	"0.001596"	"0.01304"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAIPGR"	"[K].tDAIPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"479.77924"	"958.55120"	"958.55191"	"-0.75"	"-0.00036"	"6/50"	"6"	"50"	"5326257.08636475"	"HCD"	"MS2"	"1.45979"	"283.1"	"100.000"	"31.6690"	"7925"	"7925"	"7904"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.3"	""	"390.3"	""	"401.6"	""	"446.6"	""	"533.4"	"592.1"	""	"323"	"20"	"32.000"	"25.000"	"0.171069476616132"	""	"0.002328"	"0.02228"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAIPGR"	"[K].tDAIPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"479.77942"	"958.55156"	"958.55191"	"-0.36"	"-0.00017"	"5/50"	"5"	"50"	"6274218.34387207"	"HCD"	"MS2"	"8.843276"	"305.8"	"100.000"	"31.7585"	"7924"	"7924"	"7905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"326.9"	""	"429.3"	""	"444.9"	""	"468.7"	""	"583.6"	"648.8"	""	"324"	"25"	"32.000"	"25.000"	"0.0493758988319733"	""	"0.002588"	"0.02683"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGPLTVR"	"[R].sGPLTVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"479.79758"	"958.58788"	"958.58830"	"-0.44"	"-0.00021"	"5/56"	"5"	"56"	"18323785.7937622"	"HCD"	"MS2"	"0.2799862"	"621.2"	"79.003"	"33.2896"	"8580"	"8580"	"8561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"488.7"	""	"685.5"	""	"603.8"	""	"1258.5"	""	"1415.4"	"1481.5"	""	"202"	"25"	"30.000"	"23.000"	"0.0324579714402672"	""	"0.00329"	"0.03527"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVGLIR"	"[K].aTVGLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"479.81589"	"958.62450"	"958.62468"	"-0.19"	"-0.00009"	"5/48"	"5"	"48"	"1255138.02960205"	"HCD"	"MS2"	"31.27933"	"86.6"	"100.000"	"47.2021"	"14181"	"14181"	"14158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.1"	""	"129.7"	""	"134.3"	""	"117.0"	"2.5"	"159.7"	"148.5"	""	"109"	"16"	"27.000"	"20.000"	"0.149072145583716"	"13"	"0.005507"	"0.06983"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMLTPAL"	"[K].sMLTPAL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"481.28281"	"961.55834"	"961.55897"	"-0.66"	"-0.00032"	"5/56"	"5"	"56"	"675437.793884277"	"HCD"	"MS2"	"3.301142"	"15.7"	"100.000"	"104.6985"	"37457"	"37457"	"37449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"21.5"	""	"26.7"	""	"18.6"	""	"30.1"	"27.9"	""	"252"	"37"	"31.000"	"24.000"	"0.00276930343970888"	"20"	"0.001615"	"0.0148"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMLTPAL"	"[K].sMLTPAL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"481.28342"	"961.55956"	"961.55897"	"0.61"	"0.00029"	"5/56"	"5"	"56"	"755626.66619873"	"HCD"	"MS2"	"8.978045"	"18.1"	"100.000"	"104.9337"	"37570"	"37570"	"37556"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	""	"22.6"	""	"24.5"	""	"22.4"	""	"41.9"	"35.5"	""	"252"	"27"	"31.000"	"24.000"	"0.0270004215741127"	"18"	"0.003786"	"0.04087"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIGQTR"	"[K].aSIGQTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"481.28464"	"961.56200"	"961.56281"	"-0.84"	"-0.00041"	"4/60"	"4"	"60"	"953427.748962402"	"HCD"	"MS2"	"33.69969"	"84.7"	"100.000"	"22.5636"	"4276"	"4276"	"4265"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.7"	""	"123.4"	""	"115.3"	""	"133.2"	""	"144.0"	"145.3"	""	"237"	"23"	"30.000"	"23.000"	"0.0629098066413721"	""	"0.00296"	"0.0319"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGLVGR"	"[R].sGSGLVGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"481.28464"	"961.56200"	"961.56281"	"-0.84"	"-0.00041"	"8/60"	"8"	"60"	"9528779.79302979"	"HCD"	"MS2"	"47.36509"	"753.4"	"100.000"	"25.4952"	"5467"	"5467"	"5442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1112.9"	""	"882.4"	""	"880.7"	""	"1259.4"	""	"1467.4"	"1549.3"	""	"237"	"6"	"30.000"	"23.000"	"2.74611266021265"	"15"	"0.003568"	"0.03982"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIGQTR"	"[K].aSIGQTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"481.28479"	"961.56230"	"961.56281"	"-0.53"	"-0.00025"	"5/60"	"5"	"60"	"1140433.35241699"	"HCD"	"MS2"	"29.07424"	"102.7"	"100.000"	"22.4433"	"4268"	"4268"	"4259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.7"	""	"152.2"	""	"128.4"	""	"177.6"	""	"166.3"	"177.2"	""	"241"	"23"	"30.000"	"23.000"	"0.0669864630010836"	""	"0.004713"	"0.05565"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGLVGR"	"[R].sGSGLVGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"481.28494"	"961.56261"	"961.56281"	"-0.21"	"-0.00010"	"12/60"	"12"	"60"	"9762027.6796875"	"HCD"	"MS2"	"49.44635"	"685.8"	"100.000"	"25.5985"	"5470"	"5470"	"5446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1051.3"	""	"834.4"	""	"790.3"	""	"1156.6"	"3.0"	"1314.2"	"1352.9"	""	"240"	"13"	"30.000"	"23.000"	"0.664020131058884"	"15"	"0.0001991"	"0.005587"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMPGVR"	"[R].sSMPGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"481.76791"	"962.52855"	"962.52907"	"-0.54"	"-0.00026"	"9/50"	"9"	"50"	"15029953.9293213"	"HCD"	"MS2"	"9.356662"	"832.6"	"100.000"	"28.7356"	"6750"	"6750"	"6737"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"805.8"	""	"1025.3"	""	"847.6"	""	"1252.2"	""	"1924.6"	"2087.9"	""	"384"	"17"	"32.000"	"25.000"	"0.359998945548944"	"20"	"0.004672"	"0.05488"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMPGVR"	"[R].sSMPGVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"481.76794"	"962.52861"	"962.52907"	"-0.47"	"-0.00023"	"9/50"	"9"	"50"	"15308603.8757324"	"HCD"	"MS2"	"9.13135"	"681.1"	"83.906"	"28.9133"	"6781"	"6781"	"6763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"647.4"	""	"882.4"	""	"686.3"	""	"981.3"	""	"1582.0"	"1724.2"	""	"384"	"17"	"32.000"	"25.000"	"0.354242960482459"	"18"	"0.006237"	"0.07568"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSALSR"	"[K].vTSALSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"481.79495"	"962.58263"	"962.58321"	"-0.61"	"-0.00029"	"5/56"	"5"	"56"	"5142336.7119751"	"HCD"	"MS2"	"47.39606"	"391.8"	"100.000"	"34.7731"	"9146"	"9146"	"9124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"469.6"	""	"448.4"	""	"480.5"	""	"650.4"	""	"866.5"	"815.0"	""	"188"	"5"	"29.000"	"22.000"	"3.06286498941888"	"13"	"0.005426"	"0.06926"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMNVAR"	"[K].sGMNVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"482.26532"	"963.52336"	"963.52432"	"-0.99"	"-0.00048"	"6/54"	"6"	"54"	"5053120.6519165"	"HCD"	"MS2"	"5.431475"	"343.4"	"100.000"	"24.0785"	"4859"	"4859"	"4839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"580.9"	""	"505.6"	""	"509.9"	""	"342.5"	"1.5"	"582.5"	"728.9"	""	"322"	"29"	"32.000"	"25.000"	"0.0225333558934191"	"22"	"0.003818"	"0.04188"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGMNVAR"	"[K].sGMNVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"482.26547"	"963.52367"	"963.52432"	"-0.67"	"-0.00032"	"6/54"	"6"	"54"	"4797901.82788086"	"HCD"	"MS2"	"6.857348"	"330.3"	"100.000"	"24.0108"	"4869"	"4869"	"4850"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"543.5"	""	"487.7"	""	"488.0"	""	"334.3"	""	"569.7"	"707.0"	""	"322"	"25"	"32.000"	"25.000"	"0.04740518830416"	"21"	"0.005507"	"0.06975"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"483.27847"	"965.54967"	"965.55051"	"-0.87"	"-0.00042"	"5/50"	"5"	"50"	"370064.204101563"	"HCD"	"MS2"	"40.21327"	"9.8"	"100.000"	"107.0353"	"38386"	"38386"	"38375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"13.8"	""	"13.6"	""	"13.4"	""	"18.9"	"20.3"	""	"176"	"27"	"29.000"	"22.000"	"0.0192080232242184"	"15"	"0.004893"	"0.06085"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"483.27856"	"965.54985"	"965.55051"	"-0.69"	"-0.00033"	"5/50"	"5"	"50"	"212847.643554688"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"108.1710"	"38838"	"38838"	"38828"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.4"	""	"7.1"	""	"8.3"	""	"11.6"	""	"18.6"	"18.5"	""	"176"	"22"	"29.000"	"22.000"	"0.0586789956907987"	"15"	"0.008485"	"0.1076"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.27872"	"965.55016"	"965.55051"	"-0.37"	"-0.00018"	"5/50"	"5"	"50"	"502558.035095215"	"HCD"	"MS2"	"42.93925"	"11.3"	"100.000"	"107.2907"	"38505"	"38505"	"38490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"13.3"	""	"16.0"	""	"17.1"	""	"17.8"	"22.3"	""	"176"	"24"	"29.000"	"22.000"	"0.0328460138860234"	"14"	"0.003818"	"0.04158"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"483.27872"	"965.55016"	"965.55051"	"-0.37"	"-0.00018"	"4/50"	"4"	"50"	"1613663.7545166"	"HCD"	"MS2"	"1.840027"	"21.3"	"100.000"	"107.5778"	"38594"	"38594"	"38584"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"28.4"	""	"31.3"	""	"36.4"	"1.6"	"31.8"	"42.7"	""	"176"	"28"	"29.000"	"22.000"	"0.0136924975581247"	"22"	"0.005266"	"0.06763"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"483.27872"	"965.55016"	"965.55051"	"-0.37"	"-0.00018"	"6/50"	"6"	"50"	"5808413.76641846"	"HCD"	"MS2"	"0.5221152"	"59.3"	"100.000"	"107.5694"	"38613"	"38613"	"38599"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.3"	""	"84.3"	""	"80.6"	""	"91.9"	""	"107.3"	"110.8"	""	"176"	"45"	"29.000"	"22.000"	"0.000292067122646297"	"22"	"0.001872"	"0.01577"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"483.27875"	"965.55022"	"965.55051"	"-0.31"	"-0.00015"	"5/50"	"5"	"50"	"5444200.29217529"	"HCD"	"MS2"	"0.1679876"	"53.3"	"100.000"	"107.3022"	"38490"	"38490"	"38482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.5"	""	"74.7"	""	"77.4"	""	"79.3"	""	"94.0"	"99.2"	""	"176"	"30"	"29.000"	"22.000"	"0.00932143278156015"	"21"	"0.006577"	"0.08224"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLAAIA"	"[R].dYLAAIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"483.27881"	"965.55034"	"965.55051"	"-0.18"	"-0.00009"	"5/50"	"5"	"50"	"1367641.40283203"	"HCD"	"MS2"	"3.32942"	"18.8"	"100.000"	"107.8370"	"38713"	"38713"	"38702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"22.6"	""	"23.4"	""	"29.9"	""	"43.3"	"36.5"	""	"176"	"27"	"29.000"	"22.000"	"0.0164241412793451"	""	"0.00981"	"0.1314"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LECGGGR"	"[K].lEcGGGR.[W]"	"N-Term(TMT6plex); C3(Methylthio)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.73822"	"966.46916"	"966.46984"	"-0.70"	"-0.00034"	"6/48"	"6"	"48"	"2405294.11175537"	"HCD"	"MS2"	"49.66154"	"158.0"	"100.000"	"40.5822"	"11533"	"11533"	"11509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.1"	""	"190.6"	""	"191.1"	""	"257.1"	""	"309.7"	"353.7"	""	"207"	"20"	"30.000"	"23.000"	"0.108377804723268"	"14"	"0.001951"	"0.0164"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LECGGGR"	"[K].lEcGGGR.[W]"	"N-Term(TMT6plex); C3(Methylthio)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.73822"	"966.46916"	"966.46984"	"-0.70"	"-0.00034"	"6/48"	"6"	"48"	"2758735.75634766"	"HCD"	"MS2"	"23.31011"	"182.0"	"100.000"	"40.7284"	"11557"	"11557"	"11534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.2"	""	"232.9"	""	"211.0"	""	"302.7"	""	"342.3"	"403.8"	""	"207"	"22"	"30.000"	"23.000"	"0.0682244981577873"	"14"	"0.001615"	"0.01453"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGTFAR"	"[R].sVGTFAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"483.78098"	"966.55467"	"966.55700"	"-2.40"	"-0.00116"	"5/54"	"5"	"54"	"3001718.06848145"	"HCD"	"MS2"	"0"	"197.4"	"100.000"	"29.9920"	"7219"	"7219"	"7203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.0"	""	"258.8"	""	"275.1"	""	"304.7"	""	"391.0"	"378.4"	""	"157"	"11"	"28.000"	"21.000"	"0.624985090077595"	"20"	"0.006384"	"0.0797"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGYTGLR"	"[R].aGYTGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"483.78110"	"966.55492"	"966.55700"	"-2.15"	"-0.00104"	"6/48"	"6"	"48"	"3479996.51745605"	"HCD"	"MS2"	"47.69118"	"232.9"	"100.000"	"33.1613"	"8491"	"8491"	"8466"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.1"	""	"268.7"	""	"276.5"	""	"384.3"	""	"484.9"	"539.6"	""	"157"	"17"	"28.000"	"21.000"	"0.148207320904059"	"16"	"0.004751"	"0.05629"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGYTGLR"	"[R].aGYTGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"483.78134"	"966.55541"	"966.55700"	"-1.64"	"-0.00079"	"5/48"	"5"	"48"	"3758863.60253906"	"HCD"	"MS2"	"42.76456"	"255.4"	"100.000"	"33.0506"	"8483"	"8483"	"8462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.1"	""	"284.8"	""	"291.7"	""	"447.7"	""	"533.6"	"600.8"	""	"157"	"15"	"28.000"	"21.000"	"0.239259756685797"	"15"	"0.00511"	"0.06532"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGTFAR"	"[R].sVGTFAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"483.78168"	"966.55608"	"966.55700"	"-0.95"	"-0.00046"	"5/54"	"5"	"54"	"3444244.62805176"	"HCD"	"MS2"	"4.9065"	"216.5"	"100.000"	"29.8237"	"7191"	"7191"	"7174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"300.8"	""	"293.0"	""	"307.2"	""	"317.3"	""	"404.8"	"435.3"	""	"140"	"9"	"28.000"	"21.000"	"0.910118704623304"	"21"	"0.006777"	"0.08437"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAHAIR"	"[R].gLAHAIR.[LM]"	"N-Term(TMT6plex)"	"2"	"3"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.80563"	"966.60399"	"966.60462"	"-0.65"	"-0.00031"	"6/50"	"6"	"50"	"11621772.6759033"	"HCD"	"MS2"	"9.914553"	"444.5"	"58.515"	"24.2735"	"4939"	"4939"	"4919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"891.8"	""	"626.8"	""	"726.4"	""	"625.8"	"2.9"	"642.5"	"677.7"	""	"39"	"19"	"22.000"	"15.000"	"0.0251787758354639"	"14"	"0.001615"	"0.01459"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAHAIR"	"[R].gLAHAIR.[LM]"	"N-Term(TMT6plex)"	"2"	"3"	"P08010; P08009"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2;Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08010; P08009; Q9Z1B2"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2; Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2; Glutathione S-transferase Mu 5 OS=Rattus norvegicus OX=10116 GN=Gstm5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.80563"	"966.60399"	"966.60462"	"-0.65"	"-0.00031"	"6/50"	"6"	"50"	"10458817.281189"	"HCD"	"MS2"	"10.73355"	"541.9"	"88.693"	"24.2087"	"4950"	"4950"	"4930"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"978.4"	""	"821.2"	""	"848.4"	""	"768.4"	"7.7"	"824.5"	"868.9"	""	"39"	"19"	"22.000"	"15.000"	"0.0250054463617924"	"14"	"0.001615"	"0.01339"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVAVP"	"[R].lLEVAVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"485.31241"	"969.61754"	"969.61820"	"-0.68"	"-0.00033"	"6/50"	"6"	"50"	"2610141.6116333"	"HCD"	"MS2"	"15.4835"	"36.5"	"100.000"	"113.4660"	"40908"	"40908"	"40889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"50.0"	""	"41.5"	""	"68.0"	"0.0"	"74.0"	"73.2"	""	"54"	"62"	"24.000"	"17.000"	"1.90705739651E-06"	""	"0.0001686"	"0.001281"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVAVP"	"[R].lLEVAVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"485.31250"	"969.61772"	"969.61820"	"-0.49"	"-0.00024"	"6/50"	"6"	"50"	"2571702.2097168"	"HCD"	"MS2"	"21.41982"	"32.8"	"100.000"	"113.5354"	"40950"	"40950"	"40927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"43.3"	""	"37.0"	""	"56.6"	""	"69.2"	"73.7"	""	"54"	"57"	"24.000"	"17.000"	"5.2524722203812E-06"	""	"0.0009352"	"0.007948"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELPLR"	"[R].gGELPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"485.79721"	"970.58714"	"970.58830"	"-1.19"	"-0.00058"	"7/48"	"7"	"48"	"2687435.85583496"	"HCD"	"MS2"	"38.04799"	"129.1"	"100.000"	"41.8462"	"12007"	"12007"	"11986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.6"	""	"154.4"	""	"158.1"	""	"240.7"	""	"255.6"	"256.7"	""	"164"	"20"	"29.000"	"22.000"	"0.0768800845679222"	""	"0.001596"	"0.0129"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELPLR"	"[R].gGELPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"Q642A2"	"Type-1 angiotensin II receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Agtrap PE=1 SV=1"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"485.79752"	"970.58776"	"970.58830"	"-0.56"	"-0.00027"	"8/48"	"8"	"48"	"3026506.59063721"	"HCD"	"MS2"	"28.10632"	"149.6"	"100.000"	"41.7767"	"12013"	"12013"	"11987"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.4"	""	"183.4"	""	"200.1"	""	"261.6"	""	"282.0"	"297.4"	""	"134"	"27"	"28.000"	"21.000"	"0.0133990745265394"	""	"0.001488"	"0.01263"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLALDPR"	"[R].gLALDPR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"485.79776"	"970.58824"	"970.58830"	"-0.05"	"-0.00003"	"4/48"	"4"	"48"	"610502.864807129"	"HCD"	"MS2"	"23.3826"	"37.4"	"100.000"	"48.7020"	"14827"	"14827"	"14811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.3"	""	"46.7"	""	"51.1"	""	"68.3"	"1.1"	"70.0"	"80.0"	""	"134"	"12"	"28.000"	"21.000"	"0.451933778557608"	"16"	"0.004213"	"0.04768"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPTVL"	"[R].vVNPTVL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.80969"	"970.61211"	"970.61345"	"-1.38"	"-0.00067"	"5/48"	"5"	"48"	"744459.66394043"	"HCD"	"MS2"	"16.70329"	"16.5"	"100.000"	"96.3917"	"34104"	"34104"	"34082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.6"	""	"19.9"	""	"20.5"	""	"29.1"	""	"31.9"	"33.0"	""	"142"	"18"	"28.000"	"21.000"	"0.108707209779424"	"14"	"0.006845"	"0.08594"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPTVL"	"[R].vVNPTVL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.80991"	"970.61254"	"970.61345"	"-0.94"	"-0.00046"	"5/48"	"5"	"48"	"689202.417907715"	"HCD"	"MS2"	"45.58436"	"17.1"	"100.000"	"96.4191"	"34147"	"34147"	"34126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"21.0"	""	"20.5"	""	"34.8"	""	"34.9"	"30.6"	""	"134"	"28"	"28.000"	"21.000"	"0.0114835139603065"	"14"	"0.005507"	"0.06948"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNPTVL"	"[R].vVNPTVL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.81006"	"970.61284"	"970.61345"	"-0.63"	"-0.00030"	"6/48"	"6"	"48"	"2157045.51031494"	"HCD"	"MS2"	"5.65835"	"19.6"	"100.000"	"96.6781"	"34220"	"34220"	"34207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.7"	""	"27.6"	""	"21.8"	""	"32.0"	""	"44.9"	"34.6"	""	"127"	"29"	"28.000"	"21.000"	"0.00752963155086146"	"14"	"0.00296"	"0.03141"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGALQL"	"[K].qIGALQL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESH6"	"Glutaredoxin-1 OS=Rattus norvegicus OX=10116 GN=Glrx PE=3 SV=3"	"Q9ESH6"	"Glutaredoxin-1 OS=Rattus norvegicus OX=10116 GN=Glrx PE=3 SV=3"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"486.30762"	"971.60796"	"971.60870"	"-0.76"	"-0.00037"	"6/60"	"6"	"60"	"1383494.58569336"	"HCD"	"MS2"	"15.84498"	"21.6"	"100.000"	"108.0701"	"38779"	"38779"	"38770"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"22.8"	""	"20.9"	""	"57.2"	"1.5"	"45.8"	"36.2"	""	"159"	"41"	"29.000"	"22.000"	"0.000632946683581768"	""	"0.001217"	"0.009489"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGALQL"	"[K].qIGALQL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESH6"	"Glutaredoxin-1 OS=Rattus norvegicus OX=10116 GN=Glrx PE=3 SV=3"	"Q9ESH6"	"Glutaredoxin-1 OS=Rattus norvegicus OX=10116 GN=Glrx PE=3 SV=3"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"486.30771"	"971.60814"	"971.60870"	"-0.57"	"-0.00028"	"6/60"	"6"	"60"	"1423266.21282959"	"HCD"	"MS2"	"11.70245"	"22.2"	"100.000"	"108.3040"	"38888"	"38888"	"38880"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.1"	""	"18.7"	""	"26.6"	""	"56.9"	""	"43.7"	"39.3"	""	"159"	"41"	"29.000"	"22.000"	"0.000627143793506751"	""	"0.001261"	"0.0102"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGALQL"	"[K].qIGALQL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESH6"	"Glutaredoxin-1 OS=Rattus norvegicus OX=10116 GN=Glrx PE=3 SV=3"	"Q9ESH6"	"Glutaredoxin-1 OS=Rattus norvegicus OX=10116 GN=Glrx PE=3 SV=3"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"486.30789"	"971.60851"	"971.60870"	"-0.20"	"-0.00010"	"6/60"	"6"	"60"	"530783.244812012"	"HCD"	"MS2"	"55.13923"	"17.0"	"100.000"	"108.0430"	"38790"	"38790"	"38785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"12.0"	""	"17.0"	""	"50.7"	"0.7"	"31.0"	"30.3"	""	"159"	"33"	"29.000"	"22.000"	"0.00405851474980448"	""	"0.0005161"	"0.006746"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLAIR"	"[R].aAQLAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"486.31308"	"971.61888"	"971.61993"	"-1.08"	"-0.00052"	"6/58"	"6"	"58"	"7579937.69171143"	"HCD"	"MS2"	"3.788231"	"351.9"	"100.000"	"40.8927"	"11659"	"11659"	"11640"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"448.0"	""	"486.3"	""	"524.6"	""	"605.3"	""	"670.0"	"599.6"	""	"160"	"42"	"29.000"	"22.000"	"0.000552191843072194"	""	"0.001488"	"0.01233"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLAIR"	"[R].aAQLAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"486.31323"	"971.61919"	"971.61993"	"-0.76"	"-0.00037"	"6/58"	"6"	"58"	"5633723.88555908"	"HCD"	"MS2"	"20.35138"	"276.9"	"100.000"	"40.7168"	"11552"	"11552"	"11534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"392.3"	""	"365.2"	""	"410.8"	""	"463.5"	""	"546.6"	"448.2"	""	"124"	"37"	"27.000"	"20.000"	"0.0011624965950018"	""	"0.0005161"	"0.007007"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLAIR"	"[R].aAQLAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"2"	"2"	"0.3409"	"0.0000"	"1"	"1"	"1"	"486.31326"	"971.61925"	"971.61993"	"-0.70"	"-0.00034"	"6/58"	"6"	"58"	"7342426.02362061"	"HCD"	"MS2"	"0.6467997"	"344.4"	"100.000"	"41.0134"	"11674"	"11674"	"11657"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"435.1"	""	"473.2"	""	"529.2"	""	"569.9"	""	"664.7"	"593.2"	""	"124"	"44"	"27.000"	"20.000"	"0.000269396338986375"	""	"0.001348"	"0.01054"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLAIR"	"[R].aAQLAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"P62912"	"60S ribosomal protein L32 OS=Rattus norvegicus OX=10116 GN=Rpl32 PE=1 SV=2"	"0"	"2"	"2"	"0.3256"	"0.0000"	"1"	"1"	"1"	"486.31357"	"971.61986"	"971.61993"	"-0.07"	"-0.00004"	"6/58"	"6"	"58"	"4340586.36779785"	"HCD"	"MS2"	"54.92339"	"227.1"	"100.000"	"40.5753"	"11530"	"11530"	"11509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.0"	""	"309.7"	""	"325.9"	""	"387.0"	""	"419.2"	"409.1"	""	"124"	"43"	"27.000"	"20.000"	"0.000284702767958859"	""	"0.0001991"	"0.003656"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAEVLR"	"[K].gVAEVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"486.80502"	"972.60277"	"972.60395"	"-1.21"	"-0.00059"	"6/48"	"6"	"48"	"5873483.78820801"	"HCD"	"MS2"	"6.311713"	"273.4"	"100.000"	"45.7758"	"13608"	"13608"	"13589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.3"	""	"299.9"	""	"301.3"	""	"517.3"	""	"610.1"	"621.6"	""	"266"	"36"	"31.000"	"24.000"	"0.00349825642922086"	""	"0.0009352"	"0.008211"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"486.80515"	"972.60301"	"972.60395"	"-0.96"	"-0.00047"	"8/48"	"8"	"48"	"13463049.9099731"	"HCD"	"MS2"	"0"	"512.4"	"84.722"	"44.1912"	"12963"	"12963"	"12945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"605.2"	""	"653.6"	""	"667.9"	""	"852.4"	""	"1030.1"	"1065.7"	""	"266"	"32"	"31.000"	"24.000"	"0.00854774664031636"	""	"0.001615"	"0.01395"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADLGR"	"[M].vLADLGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"Q6AYB5"	"Signal recognition particle 54 kDa protein OS=Rattus norvegicus OX=10116 GN=Srp54 PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"486.80518"	"972.60307"	"972.60395"	"-0.90"	"-0.00044"	"5/48"	"5"	"48"	"2306419.684021"	"HCD"	"MS2"	"33.51066"	"114.2"	"100.000"	"63.8106"	"20960"	"20960"	"20946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.5"	""	"158.4"	""	"168.2"	""	"195.0"	"1.2"	"202.1"	"195.9"	""	"221"	"24"	"30.000"	"23.000"	"0.0402126114920564"	""	"0.001348"	"0.01066"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"486.80518"	"972.60307"	"972.60395"	"-0.90"	"-0.00044"	"6/48"	"6"	"48"	"3940538.96539307"	"HCD"	"MS2"	"15.52279"	"204.2"	"100.000"	"43.8010"	"12840"	"12840"	"12810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.9"	""	"247.8"	""	"230.3"	""	"283.1"	""	"408.7"	"490.7"	""	"221"	"28"	"30.000"	"23.000"	"0.0177976342687199"	""	"0.002189"	"0.02126"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVVTPAR"	"[R].tVVTPAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"486.80521"	"972.60314"	"972.60395"	"-0.83"	"-0.00041"	"4/54"	"4"	"54"	"3151677.43634033"	"HCD"	"MS2"	"22.58071"	"201.4"	"100.000"	"27.1365"	"6106"	"6106"	"6092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.6"	""	"266.1"	""	"268.6"	""	"344.1"	""	"365.4"	"367.1"	""	"198"	"14"	"29.000"	"22.000"	"0.423287257290071"	""	"0.004959"	"0.06186"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVVTPAR"	"[R].tVVTPAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"486.80530"	"972.60332"	"972.60395"	"-0.64"	"-0.00031"	"4/54"	"4"	"54"	"5313328.3916626"	"HCD"	"MS2"	"7.539748"	"295.3"	"100.000"	"27.4103"	"6178"	"6178"	"6164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"414.4"	""	"377.8"	""	"400.2"	""	"537.1"	"1.6"	"529.9"	"536.5"	""	"198"	"14"	"29.000"	"22.000"	"0.384268862330742"	""	"0.004213"	"0.04557"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEILAR"	"[R].aAEILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"486.80536"	"972.60344"	"972.60395"	"-0.52"	"-0.00025"	"8/48"	"8"	"48"	"11369378.456665"	"HCD"	"MS2"	"1.237395"	"480.7"	"97.400"	"44.0819"	"12955"	"12955"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"583.0"	""	"609.7"	""	"646.6"	""	"772.2"	""	"974.2"	"984.4"	""	"198"	"34"	"29.000"	"22.000"	"0.0042037336830685"	""	"0.002035"	"0.01816"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAEVLR"	"[K].gVAEVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"486.80539"	"972.60350"	"972.60395"	"-0.46"	"-0.00022"	"6/48"	"6"	"48"	"5197159.50604248"	"HCD"	"MS2"	"17.84134"	"257.3"	"100.000"	"45.3214"	"13457"	"13457"	"13436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.9"	""	"275.0"	""	"299.9"	""	"468.3"	""	"558.5"	"580.5"	""	"198"	"33"	"29.000"	"22.000"	"0.0046093023258773"	""	"0.0003938"	"0.006216"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVAEVLR"	"[K].gVAEVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"B4F795"	"Choline transporter-like protein 2 OS=Rattus norvegicus OX=10116 GN=Slc44a2 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"486.80548"	"972.60369"	"972.60395"	"-0.27"	"-0.00013"	"6/48"	"6"	"48"	"2590539.79522705"	"HCD"	"MS2"	"42.2546"	"129.4"	"100.000"	"45.4858"	"13490"	"13490"	"13464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"142.2"	""	"143.5"	""	"144.9"	""	"234.4"	""	"272.0"	"295.4"	""	"198"	"28"	"29.000"	"22.000"	"0.0149497935262251"	"22"	"0.0008247"	"0.007639"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGSNVR"	"[R].vLGSNVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"487.30264"	"973.59801"	"973.59920"	"-1.22"	"-0.00059"	"6/52"	"6"	"52"	"8872183.9552002"	"HCD"	"MS2"	"0"	"445.4"	"100.000"	"33.7765"	"8779"	"8779"	"8761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"639.8"	""	"650.2"	""	"696.8"	""	"655.8"	"13.2"	"770.3"	"789.7"	""	"241"	"37"	"30.000"	"23.000"	"0.00269145452851079"	""	"0.001718"	"0.01504"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGSNVR"	"[R].vLGSNVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"487.30283"	"973.59838"	"973.59920"	"-0.84"	"-0.00041"	"6/52"	"6"	"52"	"9616667.93560791"	"HCD"	"MS2"	"1.915478"	"471.3"	"100.000"	"33.8550"	"8773"	"8773"	"8755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"694.7"	""	"708.9"	""	"733.8"	""	"702.6"	"5.9"	"783.5"	"828.9"	""	"214"	"46"	"30.000"	"23.000"	"0.000291329039964337"	""	"0.0001991"	"0.003601"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIGSQIR"	"[R].aIGSQIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"P86182"	"Coiled-coil domain-containing protein 22 OS=Rattus norvegicus OX=10116 GN=Ccdc22 PE=1 SV=2"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"487.30286"	"973.59844"	"973.59920"	"-0.78"	"-0.00038"	"6/52"	"6"	"52"	"5962754.4800415"	"HCD"	"MS2"	"22.7106"	"395.5"	"100.000"	"32.2335"	"8115"	"8115"	"8093"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"536.3"	""	"536.5"	""	"587.8"	""	"650.7"	"46.6"	"674.7"	"712.3"	""	"214"	"17"	"30.000"	"23.000"	"0.232479026138421"	""	"0.006613"	"0.08239"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGAVLTR"	"[R].aGGAVLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"487.30292"	"973.59856"	"973.59920"	"-0.65"	"-0.00032"	"7/56"	"7"	"56"	"5202086.73205566"	"HCD"	"MS2"	"38.88809"	"308.0"	"100.000"	"29.4257"	"6991"	"6991"	"6962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"425.5"	""	"380.1"	""	"400.7"	""	"452.3"	"0.9"	"693.0"	"572.2"	""	"214"	"40"	"30.000"	"23.000"	"0.00112301039865799"	"23"	"0.0001686"	"0.001367"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVTAIR"	"[R].aNVTAIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"487.30292"	"973.59856"	"973.59920"	"-0.65"	"-0.00032"	"6/58"	"6"	"58"	"9248200.26483154"	"HCD"	"MS2"	"5.294461"	"467.3"	"100.000"	"32.5454"	"8241"	"8241"	"8227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"622.9"	""	"586.6"	""	"586.9"	""	"819.4"	""	"926.9"	"891.5"	""	"214"	"33"	"30.000"	"23.000"	"0.00592084616860838"	""	"0.001217"	"0.009431"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVTAIR"	"[R].aNVTAIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"487.30301"	"973.59874"	"973.59920"	"-0.47"	"-0.00023"	"6/58"	"6"	"58"	"8832189.37072754"	"HCD"	"MS2"	"0"	"452.3"	"100.000"	"32.4491"	"8238"	"8238"	"8223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"615.8"	""	"564.1"	""	"578.5"	""	"792.5"	"0.2"	"874.2"	"863.8"	""	"214"	"34"	"30.000"	"23.000"	"0.00436901743375981"	""	"0.002286"	"0.02161"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAATNR"	"[K].vIAATNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.30304"	"973.59880"	"973.59920"	"-0.40"	"-0.00020"	"5/50"	"5"	"50"	"12183270.4390869"	"HCD"	"MS2"	"29.8633"	"472.8"	"70.607"	"28.2570"	"6516"	"6516"	"6497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"614.8"	""	"606.3"	""	"624.3"	""	"923.7"	"9.8"	"844.8"	"856.2"	""	"214"	"22"	"30.000"	"23.000"	"0.0721744989636777"	"14"	"0.002559"	"0.02552"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGAVLTR"	"[R].aGGAVLTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"487.30313"	"973.59899"	"973.59920"	"-0.22"	"-0.00010"	"7/56"	"7"	"56"	"4974145.4430542"	"HCD"	"MS2"	"24.45272"	"304.5"	"100.000"	"29.2687"	"6967"	"6967"	"6944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"412.3"	""	"399.7"	""	"402.6"	""	"470.5"	"4.0"	"658.5"	"542.1"	""	"214"	"41"	"30.000"	"23.000"	"0.000807948683602015"	"23"	"0.0001686"	"0.001358"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAATNR"	"[K].vIAATNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"487.30356"	"973.59984"	"973.59920"	"0.66"	"0.00032"	"6/50"	"6"	"50"	"10124620.7626953"	"HCD"	"MS2"	"18.11162"	"536.0"	"100.000"	"28.0702"	"6484"	"6484"	"6461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"716.5"	""	"656.0"	""	"760.8"	""	"960.9"	"18.9"	"994.3"	"971.9"	""	"217"	"26"	"30.000"	"23.000"	"0.027004101903364"	"22"	"0.002035"	"0.01815"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"487.79477"	"974.58226"	"974.58321"	"-0.97"	"-0.00047"	"6/54"	"6"	"54"	"16048843.8243408"	"HCD"	"MS2"	"1.438151"	"501.9"	"67.813"	"49.9008"	"15279"	"15279"	"15262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"726.4"	""	"610.9"	""	"695.9"	""	"814.6"	""	"963.5"	"956.8"	""	"339"	"38"	"32.000"	"25.000"	"0.00241640487115571"	""	"0.001596"	"0.01301"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"487.79480"	"974.58232"	"974.58321"	"-0.91"	"-0.00044"	"6/54"	"6"	"54"	"3266224.66607666"	"HCD"	"MS2"	"28.67446"	"164.1"	"100.000"	"49.9734"	"15343"	"15343"	"15323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"248.6"	""	"227.8"	""	"208.7"	""	"241.0"	"2.1"	"325.6"	"301.5"	""	"339"	"24"	"32.000"	"25.000"	"0.0741599968243237"	""	"0.001951"	"0.01667"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"487.79486"	"974.58245"	"974.58321"	"-0.79"	"-0.00038"	"5/54"	"5"	"54"	"5665089.340271"	"HCD"	"MS2"	"10.33218"	"254.6"	"100.000"	"50.1996"	"15400"	"15400"	"15382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"378.6"	""	"313.8"	""	"343.3"	""	"389.5"	""	"497.9"	"496.1"	""	"300"	"31"	"31.000"	"24.000"	"0.0115902087764355"	""	"0.001615"	"0.01449"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLVAER"	"[R].gTLVAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.2903"	"0.0000"	"1"	"1"	"1"	"487.79486"	"974.58245"	"974.58321"	"-0.79"	"-0.00038"	"6/56"	"6"	"56"	"6504234.35736084"	"HCD"	"MS2"	"38.02666"	"465.8"	"100.000"	"29.7195"	"7110"	"7110"	"7092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"701.3"	""	"651.1"	""	"687.8"	""	"798.2"	"12.4"	"788.5"	"767.6"	""	"300"	"31"	"31.000"	"24.000"	"0.0127670705730357"	""	"0.004314"	"0.05053"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"487.79492"	"974.58257"	"974.58321"	"-0.66"	"-0.00032"	"6/54"	"6"	"54"	"16679986.8126831"	"HCD"	"MS2"	"1.310267"	"535.9"	"70.798"	"49.6234"	"15201"	"15201"	"15189"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"790.5"	""	"657.4"	""	"758.9"	""	"865.9"	""	"1010.8"	"997.8"	""	"300"	"40"	"31.000"	"24.000"	"0.00139024473506902"	""	"0.0003938"	"0.00638"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"487.79550"	"974.58373"	"974.58321"	"0.53"	"0.00026"	"6/54"	"6"	"54"	"3174612.66534424"	"HCD"	"MS2"	"13.40968"	"163.2"	"100.000"	"49.3474"	"15088"	"15088"	"15066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.0"	""	"196.6"	""	"215.4"	""	"272.9"	""	"315.5"	"315.6"	""	"297"	"36"	"31.000"	"24.000"	"0.00353774441199766"	""	"0.0001991"	"0.005335"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADIAR"	"[R].sLADIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"487.79584"	"974.58440"	"974.58321"	"1.22"	"0.00059"	"6/54"	"6"	"54"	"1985596.67382813"	"HCD"	"MS2"	"24.22991"	"108.9"	"100.000"	"49.6109"	"15161"	"15161"	"15132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.5"	""	"122.3"	""	"148.4"	""	"203.1"	""	"218.7"	"198.7"	""	"300"	"36"	"31.000"	"24.000"	"0.00383787883035847"	""	"0.0001991"	"0.005588"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTAVGVR"	"[K].gSTAVGVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"488.29166"	"975.57604"	"975.57846"	"-2.48"	"-0.00121"	"7/58"	"7"	"58"	"1563318.00427246"	"HCD"	"MS2"	"26.09414"	"152.1"	"100.000"	"23.7097"	"4746"	"4746"	"4724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.9"	""	"208.7"	""	"208.1"	""	"237.8"	"3.2"	"266.4"	"282.3"	""	"309"	"19"	"31.000"	"24.000"	"0.187900737099864"	"22"	"0.002328"	"0.02216"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIVSGSR"	"[R].qIVSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"488.29233"	"975.57738"	"975.57846"	"-1.11"	"-0.00054"	"5/64"	"5"	"64"	"4681932.57421875"	"HCD"	"MS2"	"5.827037"	"328.6"	"100.000"	"24.0759"	"4858"	"4858"	"4839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"511.7"	""	"471.3"	""	"498.1"	""	"459.5"	"19.0"	"550.5"	"599.2"	""	"308"	"22"	"31.000"	"24.000"	"0.105808539762192"	"21"	"0.002922"	"0.0313"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIVSGSR"	"[R].qIVSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"488.29251"	"975.57775"	"975.57846"	"-0.73"	"-0.00036"	"6/64"	"6"	"64"	"4540701.15356445"	"HCD"	"MS2"	"4.128473"	"311.4"	"100.000"	"24.0085"	"4868"	"4868"	"4850"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"470.5"	""	"457.8"	""	"473.1"	""	"442.8"	"11.0"	"531.0"	"561.2"	""	"307"	"25"	"31.000"	"24.000"	"0.0443719361943101"	"22"	"0.002834"	"0.03004"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"488.77966"	"976.55205"	"976.55124"	"0.83"	"0.00040"	"5/54"	"5"	"54"	"253836.890197754"	"HCD"	"MS2"	"8.854636"	"15.2"	"100.000"	"104.3479"	"37338"	"37338"	"37316"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.9"	""	"17.6"	""	"20.5"	""	"19.5"	""	"35.1"	"37.5"	""	"399"	"36"	"32.000"	"26.000"	"0.00485224699810226"	"25"	"0.00856"	"0.1094"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].VLSADDk.[T]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"488.77985"	"976.55242"	"976.55124"	"1.20"	"0.00059"	"5/54"	"5"	"54"	"241086.962219238"	"HCD"	"MS2"	"18.96149"	"14.9"	"100.000"	"104.1587"	"37245"	"37245"	"37220"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"15.7"	""	"19.2"	""	"26.7"	""	"34.8"	"32.1"	""	"399"	"40"	"32.000"	"26.000"	"0.00219251664966788"	""	"0.00394"	"0.04349"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NILGGTVFR"	"[R].NILGGTVFR.[E]"	""	"2"	"2"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2;Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P56574; P41562"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2; Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"488.78177"	"976.55626"	"976.55744"	"-1.21"	"-0.00059"	"7/80"	"7"	"80"	"1254023.87176514"	"HCD"	"MS2"	"57.34481"	"37.4"	"100.000"	"65.4392"	"21622"	"21622"	"21600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.4"	""	"41.1"	""	"56.6"	""	"75.8"	""	"66.6"	"69.0"	"NoQuanLabels"	"384"	"23"	"32.000"	"25.000"	"0.105511847780664"	""	"0.004959"	"0.06207"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLSSIR"	"[R].aTLSSIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"488.80212"	"976.59697"	"976.59886"	"-1.93"	"-0.00094"	"5/54"	"5"	"54"	"5618673.15795898"	"HCD"	"MS2"	"0"	"295.5"	"100.000"	"39.0840"	"10893"	"10893"	"10873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.9"	"2.8"	"415.9"	""	"443.0"	""	"503.0"	""	"590.9"	"480.2"	""	"207"	"32"	"30.000"	"23.000"	"0.00657567514466555"	""	"0.002189"	"0.02018"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLSSIR"	"[R].aTLSSIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"488.80212"	"976.59697"	"976.59886"	"-1.93"	"-0.00094"	"5/54"	"5"	"54"	"6083992.72479248"	"HCD"	"MS2"	"0"	"316.1"	"100.000"	"38.9990"	"10894"	"10894"	"10874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"434.5"	""	"438.3"	""	"465.4"	""	"521.9"	""	"608.3"	"527.1"	""	"207"	"32"	"30.000"	"23.000"	"0.00672884229505099"	""	"0.002588"	"0.02691"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLSSIR"	"[R].aTLSSIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"488.80258"	"976.59789"	"976.59886"	"-1.00"	"-0.00049"	"6/54"	"6"	"54"	"11080022.0388794"	"HCD"	"MS2"	"43.3181"	"568.1"	"100.000"	"38.7026"	"10773"	"10773"	"10754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"782.5"	""	"772.4"	""	"811.2"	""	"997.3"	""	"1062.2"	"962.6"	""	"205"	"30"	"30.000"	"23.000"	"0.0110592039028557"	""	"0.001348"	"0.01099"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLSSIR"	"[R].aTLSSIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"488.80273"	"976.59819"	"976.59886"	"-0.68"	"-0.00033"	"5/54"	"5"	"54"	"9067829.36065674"	"HCD"	"MS2"	"50.16205"	"482.9"	"100.000"	"38.7833"	"10770"	"10770"	"10749"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"652.9"	""	"658.8"	""	"659.0"	""	"837.4"	""	"940.0"	"833.2"	""	"205"	"30"	"30.000"	"23.000"	"0.0113690418564396"	""	"0.002525"	"0.02396"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMLTPAL"	"[K].smLTPAL.[-]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"O88350"	"Putative hydrolase RBBP9 OS=Rattus norvegicus OX=10116 GN=Rbbp9 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.28018"	"977.55309"	"977.55389"	"-0.82"	"-0.00040"	"5/56"	"5"	"56"	"670358.185241699"	"HCD"	"MS2"	"25.9469"	"25.2"	"100.000"	"81.3365"	"28037"	"28037"	"28014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"33.7"	""	"34.3"	""	"45.0"	""	"51.5"	"46.7"	""	"334"	"14"	"32.000"	"25.000"	"0.696171870395461"	"13"	"0.009781"	"0.1302"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAFDLR"	"[K].aGAFDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"489.78183"	"978.55638"	"978.55700"	"-0.63"	"-0.00031"	"6/48"	"6"	"48"	"6200721.43743896"	"HCD"	"MS2"	"11.17996"	"307.4"	"100.000"	"53.3890"	"16730"	"16730"	"16712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"428.8"	""	"372.1"	""	"403.6"	""	"507.1"	""	"578.2"	"630.3"	""	"247"	"28"	"30.000"	"23.000"	"0.019663777779082"	"23"	"0.001348"	"0.01136"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAFDLR"	"[K].aGAFDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"489.78198"	"978.55669"	"978.55700"	"-0.31"	"-0.00015"	"6/48"	"6"	"48"	"5990330.28240967"	"HCD"	"MS2"	"18.56876"	"298.4"	"100.000"	"53.8217"	"16874"	"16874"	"16857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"413.3"	""	"372.9"	""	"408.9"	""	"450.7"	""	"574.0"	"612.3"	""	"247"	"24"	"30.000"	"23.000"	"0.0444290428917342"	"23"	"0.002508"	"0.02335"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGSVR"	"[R].fADGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"490.77179"	"980.53630"	"980.53626"	"0.04"	"0.00002"	"6/52"	"6"	"52"	"5758450.69274902"	"HCD"	"MS2"	"40.80278"	"340.8"	"100.000"	"34.3666"	"8981"	"8981"	"8959"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"431.8"	""	"445.0"	""	"468.6"	""	"565.8"	""	"671.7"	"655.0"	""	"210"	"14"	"30.000"	"23.000"	"0.379480355771594"	"20"	"0.005266"	"0.06758"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGSVR"	"[R].fADGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"490.77182"	"980.53636"	"980.53626"	"0.10"	"0.00005"	"6/52"	"6"	"52"	"5629641.06738281"	"HCD"	"MS2"	"49.81812"	"339.0"	"100.000"	"34.2266"	"8960"	"8960"	"8941"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"414.5"	""	"447.2"	""	"434.9"	""	"566.8"	""	"650.6"	"706.4"	""	"210"	"14"	"30.000"	"23.000"	"0.376001258957768"	"17"	"0.006267"	"0.0779"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLNSVP"	"[K].dLLNSVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"493.78897"	"986.57067"	"986.57198"	"-1.33"	"-0.00066"	"5/56"	"5"	"56"	"338804.604980469"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"103.1766"	"36871"	"36871"	"36856"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"14.8"	""	"15.9"	""	"23.7"	"1.2"	"20.4"	"21.1"	""	"378"	"27"	"32.000"	"25.000"	"0.0339986602959341"	"23"	"0.00329"	"0.0351"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLNSVP"	"[K].dLLNSVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"493.78925"	"986.57121"	"986.57198"	"-0.77"	"-0.00038"	"6/56"	"6"	"56"	"1051095.50177002"	"HCD"	"MS2"	"53.77881"	"31.7"	"100.000"	"103.5196"	"37003"	"37003"	"36985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"40.8"	""	"48.1"	""	"50.2"	""	"60.8"	"55.2"	""	"382"	"28"	"32.000"	"25.000"	"0.030763331631905"	"22"	"0.002559"	"0.02563"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLNSVP"	"[K].dLLNSVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"493.78928"	"986.57128"	"986.57198"	"-0.71"	"-0.00035"	"5/56"	"5"	"56"	"571619.510681152"	"HCD"	"MS2"	"20.3687"	"16.9"	"100.000"	"103.0556"	"36803"	"36803"	"36778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.6"	""	"27.8"	""	"25.6"	""	"28.4"	""	"27.2"	"27.3"	""	"382"	"26"	"32.000"	"25.000"	"0.0461353019378984"	"22"	"0.00394"	"0.04309"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLNSVP"	"[K].dLLNSVP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"493.78928"	"986.57128"	"986.57198"	"-0.71"	"-0.00035"	"5/56"	"5"	"56"	"1025697.34527588"	"HCD"	"MS2"	"49.15384"	"31.9"	"100.000"	"103.3475"	"36917"	"36917"	"36898"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.9"	""	"45.8"	""	"43.6"	""	"50.6"	""	"64.8"	"52.7"	""	"382"	"29"	"32.000"	"25.000"	"0.0256468107577332"	"20"	"0.001999"	"0.01756"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVAEVR"	"[K].lAVAEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"493.81268"	"986.61809"	"986.61960"	"-1.53"	"-0.00075"	"5/48"	"5"	"48"	"1838130.89019775"	"HCD"	"MS2"	"0"	"92.1"	"100.000"	"47.1170"	"14184"	"14184"	"14161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.3"	""	"115.5"	""	"120.9"	""	"158.9"	""	"163.7"	"190.5"	""	"264"	"29"	"31.000"	"24.000"	"0.0160167328261377"	""	"0.000264"	"0.006088"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVAEVR"	"[K].lAVAEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"493.81308"	"986.61888"	"986.61960"	"-0.72"	"-0.00036"	"5/48"	"5"	"48"	"1871733.75366211"	"HCD"	"MS2"	"16.93496"	"97.4"	"100.000"	"47.3861"	"14256"	"14256"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.8"	""	"129.3"	""	"124.3"	""	"172.8"	"2.4"	"175.3"	"191.2"	""	"260"	"31"	"31.000"	"24.000"	"0.0107632481282603"	""	"0.001348"	"0.01052"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAIGLR"	"[R].dLAIGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"493.81311"	"986.61894"	"986.61960"	"-0.66"	"-0.00033"	"4/48"	"4"	"48"	"3726897.14782715"	"HCD"	"MS2"	"4.579337"	"168.4"	"100.000"	"62.1900"	"20301"	"20301"	"20281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.8"	""	"258.6"	""	"257.3"	""	"192.4"	""	"276.1"	"337.7"	""	"260"	"24"	"31.000"	"24.000"	"0.0504595475787843"	""	"0.007069"	"0.09027"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAIGLR"	"[R].dLAIGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"493.81326"	"986.61925"	"986.61960"	"-0.35"	"-0.00017"	"10/48"	"10"	"48"	"3912215.4977417"	"HCD"	"MS2"	"3.148921"	"178.8"	"100.000"	"62.3156"	"20319"	"20319"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"297.3"	""	"266.0"	""	"276.2"	""	"200.6"	""	"298.8"	"355.1"	""	"196"	"23"	"29.000"	"22.000"	"0.0507254695311556"	""	"0.009239"	"0.1187"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAIGLR"	"[R].dLAIGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"0"	"2"	"2"	"0.1724"	"0.0000"	"1"	"1"	"1"	"493.81354"	"986.61980"	"986.61960"	"0.20"	"0.00010"	"6/48"	"6"	"48"	"1157788.62249756"	"HCD"	"MS2"	"25.8274"	"65.2"	"100.000"	"62.0161"	"20198"	"20198"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.8"	""	"91.3"	""	"101.6"	""	"83.5"	""	"99.7"	"134.6"	""	"196"	"29"	"29.000"	"22.000"	"0.0131894314697483"	""	"0.002189"	"0.02099"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAIGLR"	"[R].dLAIGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"A6N6J5"	"WD repeat-containing protein 35 OS=Rattus norvegicus OX=10116 GN=Wdr35 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"493.81470"	"986.62212"	"986.61960"	"2.56"	"0.00126"	"6/48"	"6"	"48"	"636323.601867676"	"HCD"	"MS2"	"37.78229"	"39.2"	"100.000"	"70.2715"	"23549"	"23549"	"23525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.5"	""	"51.4"	""	"63.1"	""	"56.3"	""	"67.9"	"77.5"	""	"193"	"18"	"29.000"	"22.000"	"0.171209284905901"	""	"0.006845"	"0.08574"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"494.28152"	"987.55577"	"987.55733"	"-1.58"	"-0.00078"	"6/62"	"6"	"62"	"23886994.4606934"	"HCD"	"MS2"	"0.283085"	"472.2"	"45.703"	"32.3252"	"8152"	"8152"	"8134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"597.2"	""	"526.5"	""	"637.3"	""	"779.5"	""	"856.2"	"1097.5"	""	"392"	"24"	"32.000"	"25.000"	"0.0706734140322419"	"20"	"0.004959"	"0.06148"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"494.28171"	"987.55614"	"987.55733"	"-1.21"	"-0.00060"	"6/62"	"6"	"62"	"10811273.8233643"	"HCD"	"MS2"	"32.15047"	"577.2"	"100.000"	"31.9170"	"8026"	"8026"	"8011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"793.3"	""	"653.5"	""	"725.8"	""	"983.3"	""	"1071.7"	"1260.8"	""	"392"	"20"	"32.000"	"25.000"	"0.184185768870669"	"21"	"0.004114"	"0.04494"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"494.28171"	"987.55614"	"987.55733"	"-1.21"	"-0.00060"	"6/62"	"6"	"62"	"10311144.3630981"	"HCD"	"MS2"	"42.52719"	"567.2"	"100.000"	"32.0250"	"8032"	"8032"	"8022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"750.2"	""	"598.9"	""	"687.5"	""	"1033.1"	""	"1094.3"	"1230.5"	""	"392"	"20"	"32.000"	"25.000"	"0.179579216063912"	"22"	"0.007443"	"0.09554"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGPGPFR"	"[K].qGPGPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"494.28207"	"987.55687"	"987.55733"	"-0.47"	"-0.00023"	"6/62"	"6"	"62"	"25298771.0651855"	"HCD"	"MS2"	"0"	"536.9"	"49.121"	"32.1897"	"8134"	"8134"	"8121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"694.7"	""	"618.3"	""	"726.9"	""	"891.0"	""	"957.5"	"1217.4"	""	"367"	"25"	"32.000"	"25.000"	"0.0572316238681237"	"20"	"0.004234"	"0.04907"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNGITPR"	"[K].tNGITPR.[R]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"494.29221"	"987.57713"	"987.57846"	"-1.34"	"-0.00066"	"7/66"	"7"	"66"	"2801668.32269287"	"HCD"	"MS2"	"42.02888"	"169.6"	"100.000"	"25.0776"	"5301"	"5301"	"5280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.1"	""	"229.3"	""	"235.5"	""	"272.3"	""	"291.8"	"317.7"	""	"376"	"10"	"32.000"	"25.000"	"1.9640740121351"	"19"	"0.009444"	"0.1255"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDGLNR"	"[K].aLDGLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"494.29282"	"987.57836"	"987.57846"	"-0.11"	"-0.00005"	"5/50"	"5"	"50"	"15567379.9111328"	"HCD"	"MS2"	"50.67373"	"738.4"	"82.451"	"40.0786"	"11327"	"11327"	"11311"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1058.3"	""	"1099.3"	""	"1165.7"	""	"1189.4"	"1.4"	"1277.9"	"1193.4"	""	"301"	"29"	"31.000"	"24.000"	"0.0171607593027956"	""	"0.003529"	"0.03873"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDGLNR"	"[K].aLDGLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"494.29288"	"987.57848"	"987.57846"	"0.02"	"0.00001"	"5/50"	"5"	"50"	"14855962.0109863"	"HCD"	"MS2"	"50.57612"	"739.4"	"86.344"	"40.1676"	"11329"	"11329"	"11313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1063.0"	""	"1092.7"	""	"1178.2"	""	"1198.6"	""	"1248.6"	"1213.6"	""	"301"	"29"	"31.000"	"24.000"	"0.0170034285158256"	""	"0.006845"	"0.08564"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIIASAR"	"[K].aGIIASAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"494.31073"	"987.61418"	"987.61485"	"-0.67"	"-0.00033"	"6/56"	"6"	"56"	"7029064.95080566"	"HCD"	"MS2"	"30.04394"	"394.2"	"100.000"	"38.1350"	"10505"	"10505"	"10486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"561.8"	""	"559.8"	""	"575.8"	""	"636.4"	""	"676.4"	"723.0"	""	"270"	"45"	"31.000"	"24.000"	"0.000403955725942106"	""	"0.0001686"	"0.001777"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGIIASAR"	"[K].aGIIASAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.4889"	"0.0000"	"1"	"1"	"1"	"494.31085"	"987.61443"	"987.61485"	"-0.42"	"-0.00021"	"6/56"	"6"	"56"	"7034383.57910156"	"HCD"	"MS2"	"27.34691"	"394.9"	"100.000"	"38.0568"	"10509"	"10509"	"10487"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"569.8"	""	"548.6"	""	"580.1"	""	"625.4"	""	"704.8"	"716.7"	""	"244"	"45"	"30.000"	"23.000"	"0.000377885154504423"	""	"0.0001686"	"0.00179"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVATAIR"	"[K].eVATAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"494.80283"	"988.59838"	"988.59886"	"-0.49"	"-0.00024"	"9/54"	"9"	"54"	"7169665.64056396"	"HCD"	"MS2"	"15.10789"	"382.7"	"100.000"	"33.3033"	"8586"	"8586"	"8561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"514.3"	""	"534.6"	""	"571.2"	""	"605.0"	""	"717.4"	"686.0"	""	"366"	"27"	"32.000"	"25.000"	"0.0393052976765887"	""	"0.004959"	"0.06251"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVATAIR"	"[K].eVATAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"P27952"	"40S ribosomal protein S2 OS=Rattus norvegicus OX=10116 GN=Rps2 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"494.80286"	"988.59844"	"988.59886"	"-0.43"	"-0.00021"	"6/54"	"6"	"54"	"5772511.43225098"	"HCD"	"MS2"	"16.3533"	"307.5"	"100.000"	"33.3794"	"8579"	"8579"	"8560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"423.5"	""	"428.5"	""	"457.9"	""	"529.0"	""	"542.6"	"533.5"	""	"366"	"26"	"32.000"	"25.000"	"0.0463928539381117"	""	"0.009514"	"0.1271"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGDVLR"	"[R].sLGDVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64350"	"Translation initiation factor eIF-2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2"	"Q64350"	"Translation initiation factor eIF-2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"494.80298"	"988.59868"	"988.59886"	"-0.18"	"-0.00009"	"6/54"	"6"	"54"	"1211004.57928467"	"HCD"	"MS2"	"53.87413"	"79.1"	"100.000"	"63.7075"	"20919"	"20919"	"20889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.8"	""	"103.6"	""	"116.6"	""	"125.6"	""	"141.7"	"158.5"	""	"366"	"20"	"32.000"	"25.000"	"0.167668349692326"	""	"0.002035"	"0.01778"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALTELGR"	"[R].aLTELGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.0500"	"0.0000"	"1"	"1"	"1"	"494.80328"	"988.59929"	"988.59886"	"0.43"	"0.00021"	"6/50"	"6"	"50"	"1958406.9730835"	"HCD"	"MS2"	"0"	"99.4"	"100.000"	"46.9500"	"14078"	"14078"	"14061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.8"	""	"193.3"	""	"102.2"	""	"145.1"	"1.5"	"211.0"	"156.0"	""	"372"	"20"	"32.000"	"25.000"	"0.17199386035251"	""	"0.007831"	"0.09988"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLGDVLR"	"[R].sLGDVLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64350"	"Translation initiation factor eIF-2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2"	"Q64350"	"Translation initiation factor eIF-2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"494.80392"	"988.60057"	"988.59886"	"1.73"	"0.00086"	"3/54"	"3"	"54"	"1798501.84326172"	"HCD"	"MS2"	"41.24958"	"100.4"	"100.000"	"63.8737"	"20954"	"20954"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.8"	""	"131.0"	""	"155.5"	""	"166.2"	""	"179.8"	"202.8"	""	"371"	"15"	"32.000"	"25.000"	"0.553788475809282"	""	"0.005266"	"0.06696"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAPFLK"	"[M].aAAPFLk.[H]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"494.80444"	"988.60161"	"988.60288"	"-1.29"	"-0.00064"	"4/50"	"4"	"50"	"739357.161499023"	"HCD"	"MS2"	"59.53361"	"25.7"	"100.000"	"99.7381"	"35458"	"35458"	"35429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"34.0"	""	"40.4"	""	"45.3"	""	"41.9"	"37.7"	""	"367"	"27"	"32.000"	"25.000"	"0.0337781662269553"	"16"	"0.003317"	"0.03633"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAPFLK"	"[M].aAAPFLk.[H]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"494.80466"	"988.60204"	"988.60288"	"-0.86"	"-0.00042"	"4/50"	"4"	"50"	"882132.433959961"	"HCD"	"MS2"	"43.98244"	"31.3"	"100.000"	"99.8157"	"35517"	"35517"	"35495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"41.4"	""	"44.2"	""	"55.8"	""	"52.6"	"52.7"	""	"367"	"26"	"32.000"	"25.000"	"0.0512431794867051"	"16"	"0.002755"	"0.02933"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAPFLK"	"[M].aAAPFLk.[H]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"494.80475"	"988.60222"	"988.60288"	"-0.67"	"-0.00033"	"4/50"	"4"	"50"	"1469798.24456787"	"HCD"	"MS2"	"1.241377"	"57.0"	"100.000"	"100.1015"	"35634"	"35634"	"35618"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.4"	""	"79.8"	""	"83.6"	""	"96.4"	""	"89.2"	"107.1"	""	"367"	"28"	"32.000"	"25.000"	"0.0262202041386787"	"21"	"0.001872"	"0.01582"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAPFLK"	"[M].aAAPFLk.[H]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"494.80484"	"988.60240"	"988.60288"	"-0.49"	"-0.00024"	"4/50"	"4"	"50"	"1572047.86187744"	"HCD"	"MS2"	"3.289291"	"59.8"	"100.000"	"100.0263"	"35575"	"35575"	"35556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.8"	""	"86.8"	""	"91.0"	""	"87.3"	""	"102.0"	"104.3"	""	"359"	"31"	"32.000"	"25.000"	"0.0134296425341752"	"20"	"0.001615"	"0.01363"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGINVR"	"[K].tTGINVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"495.30011"	"989.59294"	"989.59411"	"-1.18"	"-0.00058"	"10/54"	"10"	"54"	"9207342.92633057"	"HCD"	"MS2"	"6.821163"	"506.7"	"100.000"	"30.3653"	"7410"	"7410"	"7386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"709.4"	""	"625.4"	""	"646.4"	""	"888.3"	"12.4"	"1001.8"	"921.4"	""	"409"	"26"	"33.000"	"26.000"	"0.0569761778984788"	"22"	"0.00329"	"0.03524"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGINVR"	"[K].tTGINVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"495.30017"	"989.59307"	"989.59411"	"-1.06"	"-0.00052"	"5/54"	"5"	"54"	"8694687.12976074"	"HCD"	"MS2"	"3.061417"	"470.7"	"100.000"	"30.5151"	"7430"	"7430"	"7409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"663.5"	""	"573.8"	""	"592.3"	""	"821.2"	"2.6"	"933.0"	"877.3"	""	"409"	"24"	"33.000"	"26.000"	"0.0905093221481572"	"22"	"0.004713"	"0.05545"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAIDR"	"[R].sLSAIDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"495.79132"	"990.57536"	"990.57813"	"-2.79"	"-0.00138"	"6/58"	"6"	"58"	"3900332.02935791"	"HCD"	"MS2"	"39.15118"	"238.4"	"100.000"	"39.3280"	"10991"	"10991"	"10982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"292.9"	""	"299.2"	""	"326.3"	""	"376.3"	""	"520.0"	"454.5"	""	"448"	"26"	"33.000"	"26.000"	"0.0626971815598097"	"20"	"0.005589"	"0.0704"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAIDR"	"[R].sLSAIDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"495.79181"	"990.57634"	"990.57813"	"-1.80"	"-0.00089"	"6/58"	"6"	"58"	"3485451.36340332"	"HCD"	"MS2"	"40.90845"	"232.7"	"100.000"	"39.3195"	"11023"	"11023"	"11002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"291.6"	""	"282.5"	""	"326.5"	""	"377.5"	""	"495.7"	"434.7"	""	"453"	"24"	"33.000"	"26.000"	"0.0907963115425842"	"18"	"0.009713"	"0.1291"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLLTLK"	"[R].SSLLTLk.[R]"	"K7(TMT6plex)"	"1"	"1"	"Q80Z32"	"Origin recognition complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Orc1 PE=2 SV=1"	"Q80Z32"	"Origin recognition complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Orc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"495.82315"	"990.63902"	"990.63966"	"-0.64"	"-0.00032"	"4/56"	"4"	"56"	"2562573.61785889"	"HCD"	"MS2"	"26.12403"	"82.3"	"100.000"	"110.6693"	"39779"	"39779"	"39751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.7"	""	"115.4"	""	"110.5"	""	"144.3"	"0.7"	"93.3"	"162.2"	""	"52"	"25"	"24.000"	"17.000"	"0.00839408471645285"	""	"0.006697"	"0.08333"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGAVWR"	"[R].sSGAVWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"496.27930"	"991.55132"	"991.55225"	"-0.94"	"-0.00046"	"6/50"	"6"	"50"	"8174974.48175049"	"HCD"	"MS2"	"47.07191"	"537.3"	"100.000"	"33.1797"	"8498"	"8498"	"8482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"784.7"	""	"676.2"	""	"667.8"	""	"940.3"	""	"1035.4"	"997.3"	""	"386"	"16"	"32.000"	"25.000"	"0.479244689322045"	"20"	"0.004234"	"0.05004"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGAVWR"	"[R].sSGAVWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"496.27945"	"991.55162"	"991.55225"	"-0.63"	"-0.00031"	"6/50"	"6"	"50"	"8101083.20056152"	"HCD"	"MS2"	"45.94534"	"530.6"	"100.000"	"33.0805"	"8495"	"8495"	"8478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"826.4"	""	"662.9"	""	"704.2"	""	"899.0"	""	"973.5"	"966.2"	""	"386"	"16"	"32.000"	"25.000"	"0.536484660677543"	"20"	"0.003749"	"0.04032"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEAFAR"	"[K].vAEAFAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"496.78925"	"992.57121"	"992.57265"	"-1.44"	"-0.00072"	"5/48"	"5"	"48"	"4293900.28271484"	"HCD"	"MS2"	"5.361011"	"242.7"	"100.000"	"44.8085"	"13214"	"13214"	"13195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"377.7"	""	"320.2"	""	"335.0"	""	"373.7"	""	"425.3"	"470.0"	""	"334"	"28"	"32.000"	"25.000"	"0.0255691606100899"	"21"	"0.002628"	"0.0278"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAGLFR"	"[R].eAAGLFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA9"	"CCR4-NOT transcription complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Cnot11 PE=2 SV=1"	"B0BNA9"	"CCR4-NOT transcription complex subunit 11 OS=Rattus norvegicus OX=10116 GN=Cnot11 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"496.78958"	"992.57189"	"992.57265"	"-0.77"	"-0.00038"	"6/48"	"6"	"48"	"1313788.35662842"	"HCD"	"MS2"	"37.36709"	"84.4"	"100.000"	"49.4255"	"15120"	"15120"	"15095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.1"	""	"120.2"	""	"117.9"	""	"139.5"	"0.1"	"152.0"	"156.3"	""	"334"	"16"	"32.000"	"25.000"	"0.433227953473842"	"17"	"0.006777"	"0.08454"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEAFAR"	"[K].vAEAFAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"496.78992"	"992.57256"	"992.57265"	"-0.09"	"-0.00004"	"5/48"	"5"	"48"	"9334824.01446533"	"HCD"	"MS2"	"7.583584"	"444.4"	"100.000"	"44.3387"	"13059"	"13059"	"13045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"750.0"	""	"599.9"	""	"614.3"	""	"669.1"	""	"758.8"	"814.4"	""	"307"	"28"	"31.000"	"24.000"	"0.0251251336039169"	"23"	"0.001951"	"0.0168"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEAFAR"	"[K].vAEAFAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"496.78995"	"992.57262"	"992.57265"	"-0.03"	"-0.00001"	"5/48"	"5"	"48"	"7675686.36682129"	"HCD"	"MS2"	"0"	"384.1"	"100.000"	"44.5011"	"13090"	"13090"	"13072"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"648.0"	""	"527.9"	""	"550.0"	""	"544.7"	"0.4"	"662.2"	"701.3"	""	"307"	"30"	"31.000"	"24.000"	"0.015209270354104"	"23"	"0.00212"	"0.01889"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVGSGAR"	"[K].fAVGSGAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"497.28696"	"993.56664"	"993.56790"	"-1.27"	"-0.00063"	"6/56"	"6"	"56"	"4552615.72027588"	"HCD"	"MS2"	"3.732915"	"270.7"	"100.000"	"36.8078"	"9965"	"9965"	"9949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"369.5"	""	"383.2"	""	"377.9"	""	"429.0"	"0.6"	"509.9"	"494.8"	""	"240"	"39"	"30.000"	"23.000"	"0.00165265136267274"	""	"9.9E-05"	"0.0006656"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVGSGAR"	"[K].fAVGSGAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"497.28708"	"993.56688"	"993.56790"	"-1.02"	"-0.00051"	"6/56"	"6"	"56"	"3347342.40637207"	"HCD"	"MS2"	"9.435464"	"222.1"	"100.000"	"36.7965"	"9998"	"9998"	"9981"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.9"	""	"315.1"	""	"323.5"	""	"344.0"	"0.8"	"429.4"	"413.1"	""	"240"	"35"	"30.000"	"23.000"	"0.00374266750091272"	""	"0.0001686"	"0.001114"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFADLGR"	"[R].sFADLGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLK8"	"PX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Pxdc1 PE=2 SV=1"	"Q4KLK8"	"PX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Pxdc1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"497.77859"	"994.54991"	"994.55191"	"-2.01"	"-0.00100"	"6/54"	"6"	"54"	"1378135.64862061"	"HCD"	"MS2"	"28.32972"	"84.0"	"100.000"	"53.7757"	"16888"	"16888"	"16864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.2"	""	"109.7"	""	"127.5"	""	"137.0"	"1.0"	"159.3"	"147.8"	""	"269"	"18"	"31.000"	"24.000"	"0.20357398791467"	"19"	"0.002711"	"0.02863"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFADLGR"	"[R].sFADLGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLK8"	"PX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Pxdc1 PE=2 SV=1"	"Q4KLK8"	"PX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Pxdc1 PE=2 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"497.77921"	"994.55113"	"994.55191"	"-0.78"	"-0.00039"	"5/54"	"5"	"54"	"1396148.8170166"	"HCD"	"MS2"	"26.86058"	"89.6"	"100.000"	"54.0564"	"16969"	"16969"	"16947"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.8"	""	"115.8"	""	"128.9"	""	"149.7"	""	"177.0"	"168.0"	""	"265"	"19"	"31.000"	"24.000"	"0.179562597136512"	"20"	"0.001488"	"0.01244"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLFTR"	"[R].gGDLFTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"497.77948"	"994.55168"	"994.55191"	"-0.23"	"-0.00011"	"10/54"	"10"	"54"	"5065802.01452637"	"HCD"	"MS2"	"15.99019"	"274.6"	"100.000"	"45.5437"	"13513"	"13513"	"13494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.1"	""	"338.3"	""	"369.8"	""	"465.2"	""	"555.0"	"524.4"	""	"231"	"15"	"30.000"	"23.000"	"0.333873526413213"	""	"0.002711"	"0.02853"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPPGGR"	"[R].iVAPPGGR.[AS]"	"N-Term(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"498.31317"	"995.61907"	"995.61993"	"-0.87"	"-0.00043"	"5/58"	"5"	"58"	"13673270.5535278"	"HCD"	"MS2"	"7.962935"	"613.2"	"100.000"	"38.3994"	"10613"	"10613"	"10594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"666.1"	""	"665.4"	""	"687.4"	""	"1464.5"	"4.7"	"1264.9"	"1067.4"	""	"59"	"24"	"24.000"	"17.000"	"0.0117441615313282"	"15"	"0.00307"	"0.03318"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPPGGR"	"[R].iVAPPGGR.[AS]"	"N-Term(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"498.31326"	"995.61925"	"995.61993"	"-0.68"	"-0.00034"	"5/58"	"5"	"58"	"26666622.8392334"	"HCD"	"MS2"	"0.1676967"	"393.1"	"38.017"	"38.6177"	"10739"	"10739"	"10723"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"380.5"	""	"392.0"	""	"436.9"	""	"951.2"	""	"853.8"	"725.2"	""	"59"	"26"	"24.000"	"17.000"	"0.00767047071133755"	"16"	"0.002588"	"0.02642"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPPGGR"	"[R].iVAPPGGR.[AS]"	"N-Term(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"498.31332"	"995.61937"	"995.61993"	"-0.56"	"-0.00028"	"5/58"	"5"	"58"	"16605369.553894"	"HCD"	"MS2"	"4.904302"	"681.9"	"100.000"	"38.3143"	"10614"	"10614"	"10596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"728.9"	""	"712.5"	""	"776.2"	""	"1613.2"	""	"1457.0"	"1191.4"	""	"59"	"23"	"24.000"	"17.000"	"0.0162114557787999"	"15"	"0.002328"	"0.0221"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAPPGGR"	"[R].iVAPPGGR.[AS]"	"N-Term(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"498.31339"	"995.61949"	"995.61993"	"-0.44"	"-0.00022"	"7/58"	"7"	"58"	"32815854.9428711"	"HCD"	"MS2"	"0.1284273"	"412.5"	"32.061"	"38.7004"	"10736"	"10736"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"399.4"	""	"382.3"	""	"465.8"	""	"1006.4"	""	"919.9"	"748.2"	""	"58"	"25"	"24.000"	"17.000"	"0.00834445540273344"	"17"	"0.002559"	"0.02555"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"499.77151"	"998.53575"	"998.54179"	"-6.05"	"-0.00302"	"7/64"	"7"	"64"	"2429527.62139893"	"HCD"	"MS2"	"2.100865"	"93.1"	"100.000"	"104.7486"	"37498"	"37498"	"37482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.9"	""	"74.0"	""	"100.5"	""	"191.4"	""	"241.2"	"197.7"	"NoQuanLabels"	"202"	"16"	"30.000"	"23.000"	"0.231911013459349"	"22"	"0.006845"	"0.08536"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"499.77240"	"998.53752"	"998.54179"	"-4.27"	"-0.00213"	"7/64"	"7"	"64"	"2045548.69128418"	"HCD"	"MS2"	"0"	"67.9"	"100.000"	"104.2794"	"37293"	"37293"	"37286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.0"	""	"62.2"	""	"77.6"	""	"151.1"	""	"172.4"	"137.7"	"NoQuanLabels"	"205"	"25"	"30.000"	"23.000"	"0.0306001718439091"	"22"	"0.0006415"	"0.007224"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"499.77274"	"998.53819"	"998.54179"	"-3.60"	"-0.00180"	"6/64"	"6"	"64"	"2079627.34857178"	"HCD"	"MS2"	"1.987602"	"67.9"	"100.000"	"104.4704"	"37387"	"37387"	"37373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.5"	""	"59.0"	""	"73.9"	""	"160.1"	""	"166.9"	"132.9"	"NoQuanLabels"	"213"	"27"	"30.000"	"23.000"	"0.0193798141441963"	""	"0.0007633"	"0.007338"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"499.77426"	"998.54125"	"998.54179"	"-0.55"	"-0.00027"	"8/64"	"8"	"64"	"4721749.91638184"	"HCD"	"MS2"	"0.4285014"	"8.4"	"100.000"	"104.1887"	"37274"	"37274"	"37258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"10.9"	""	"14.2"	""	"12.0"	""	"17.3"	"15.4"	"NoQuanLabels"	"195"	"65"	"29.000"	"22.000"	"3.25840164025461E-06"	""	"9.9E-05"	"0.0005935"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"499.77441"	"998.54155"	"998.54179"	"-0.24"	"-0.00012"	"8/64"	"8"	"64"	"2169349.6036377"	"HCD"	"MS2"	"25.0722"	"9.2"	"100.000"	"103.3944"	"36936"	"36936"	"36914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"8.9"	""	"15.3"	""	"14.8"	""	"17.8"	"17.6"	"NoQuanLabels"	"195"	"62"	"29.000"	"22.000"	"5.63643646220575E-06"	""	"0"	"0.0002749"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"499.77460"	"998.54192"	"998.54179"	"0.13"	"0.00006"	"8/64"	"8"	"64"	"4973513.10955811"	"HCD"	"MS2"	"0.1885363"	"8.4"	"100.000"	"104.0019"	"37182"	"37182"	"37165"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	"2.2"	"10.3"	""	"10.0"	""	"14.2"	""	"13.4"	"19.2"	"NoQuanLabels"	"189"	"70"	"29.000"	"22.000"	"1.01725962688019E-06"	""	"0"	"9.34E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6912"	"0.0000"	"1"	"1"	"1"	"499.77472"	"998.54216"	"998.54179"	"0.37"	"0.00019"	"8/64"	"8"	"64"	"25315663.9638672"	"HCD"	"MS2"	"0"	"2.5"	"39.048"	"103.8838"	"37151"	"37151"	"37134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.4"	"2.6"	"2.6"	""	"3.8"	""	"2.8"	""	"4.7"	"4.1"	"NoQuanLabels"	"191"	"68"	"29.000"	"22.000"	"1.46555921857333E-06"	""	"0"	"8.236E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7606"	"0.0000"	"1"	"1"	"1"	"499.77478"	"998.54228"	"998.54179"	"0.49"	"0.00025"	"8/64"	"8"	"64"	"2422449.1159668"	"HCD"	"MS2"	"2.086851"	"10.3"	"100.000"	"103.5796"	"37027"	"37027"	"37015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"16.8"	""	"17.6"	""	"15.6"	""	"15.9"	"21.8"	"NoQuanLabels"	"191"	"71"	"29.000"	"22.000"	"7.62084926340917E-07"	""	"0"	"6.368E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASLWVGPR"	"[M].aASLWVGPR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"499.77512"	"998.54296"	"998.54179"	"1.17"	"0.00058"	"8/64"	"8"	"64"	"24061971.0600586"	"HCD"	"MS2"	"0"	"3.0"	"41.722"	"103.6969"	"37059"	"37059"	"37042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	"4.2"	"4.2"	""	"4.2"	""	"1.6"	""	"4.5"	"6.7"	"NoQuanLabels"	"210"	"74"	"30.000"	"23.000"	"4.30714308135937E-07"	""	"0"	"6.351E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEVGPR"	"[K].iVEVGPR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"D4A5C3; P97519"	"3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Hmgcll1 PE=1 SV=1; Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"499.81363"	"998.61998"	"998.61960"	"0.39"	"0.00019"	"6/48"	"6"	"48"	"2653964.83752441"	"HCD"	"MS2"	"0"	"138.8"	"100.000"	"46.0755"	"13765"	"13765"	"13749"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.5"	""	"194.6"	""	"214.2"	""	"190.0"	""	"256.2"	"265.5"	""	"115"	"21"	"27.000"	"20.000"	"0.0460964886447916"	"19"	"0.002035"	"0.01786"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIVPLK"	"[M].aSIVPLk.[E]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"499.82559"	"998.64391"	"998.64475"	"-0.84"	"-0.00042"	"4/48"	"4"	"48"	"3285161.50518799"	"HCD"	"MS2"	"19.67771"	"113.4"	"100.000"	"100.7830"	"35883"	"35883"	"35865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.3"	""	"155.2"	""	"156.8"	""	"204.2"	""	"202.5"	"238.3"	""	"89"	"27"	"26.000"	"19.000"	"0.00875709398919546"	""	"0.00212"	"0.01925"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIVPLK"	"[M].aSIVPLk.[E]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"499.82596"	"998.64464"	"998.64475"	"-0.11"	"-0.00005"	"4/48"	"4"	"48"	"3984236.87823486"	"HCD"	"MS2"	"21.21179"	"139.2"	"100.000"	"100.8885"	"35954"	"35954"	"35937"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.4"	""	"199.4"	""	"178.1"	""	"246.5"	""	"261.2"	"291.8"	""	"78"	"23"	"25.000"	"18.000"	"0.0206568743117746"	""	"0.003818"	"0.04186"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIVPLK"	"[M].aSIVPLk.[E]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"499.82602"	"998.64476"	"998.64475"	"0.01"	"0.00001"	"5/48"	"5"	"48"	"7301646.68707275"	"HCD"	"MS2"	"3.975734"	"243.2"	"100.000"	"101.0649"	"35997"	"35997"	"35986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.7"	""	"308.4"	""	"330.2"	""	"409.1"	""	"472.7"	"548.4"	""	"78"	"42"	"25.000"	"18.000"	"0.0002312408765862"	""	"0.001615"	"0.01415"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIVPLK"	"[M].aSIVPLk.[E]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"D3ZAF6"	"ATP synthase subunit f, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mf PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"499.82620"	"998.64513"	"998.64475"	"0.38"	"0.00019"	"5/48"	"5"	"48"	"7153756.0557251"	"HCD"	"MS2"	"4.190537"	"235.2"	"100.000"	"101.1843"	"36072"	"36072"	"36060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.1"	"2.4"	"307.4"	""	"341.2"	""	"372.2"	""	"456.4"	"507.2"	""	"78"	"36"	"25.000"	"18.000"	"0.000955134664319451"	""	"0.001348"	"0.01149"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGWGPPR"	"[K].tGWGPPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"500.28174"	"999.55620"	"999.55733"	"-1.13"	"-0.00057"	"6/48"	"6"	"48"	"7427672.99603271"	"HCD"	"MS2"	"16.96307"	"345.0"	"100.000"	"40.5293"	"11511"	"11511"	"11493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"516.2"	""	"487.9"	""	"516.1"	""	"499.0"	"0.3"	"590.8"	"656.1"	""	"174"	"20"	"29.000"	"22.000"	"0.0958339199301032"	""	"0.003818"	"0.0413"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGWGPPR"	"[K].tGWGPPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"500.28198"	"999.55669"	"999.55733"	"-0.64"	"-0.00032"	"6/48"	"6"	"48"	"2675686.38452148"	"HCD"	"MS2"	"16.49268"	"139.6"	"100.000"	"40.9052"	"11629"	"11629"	"11611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.8"	""	"207.2"	""	"209.5"	""	"202.7"	"1.0"	"223.1"	"263.2"	""	"174"	"19"	"29.000"	"22.000"	"0.107527426709672"	""	"0.002799"	"0.02949"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGWGPPR"	"[K].tGWGPPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"500.28210"	"999.55693"	"999.55733"	"-0.40"	"-0.00020"	"6/48"	"6"	"48"	"2164044.15673828"	"HCD"	"MS2"	"27.18675"	"119.8"	"100.000"	"40.8261"	"11632"	"11632"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.5"	""	"170.4"	""	"174.2"	""	"182.2"	"0.8"	"209.2"	"216.7"	""	"181"	"16"	"29.000"	"22.000"	"0.22011446282118"	"20"	"0.002462"	"0.02321"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGWGPPR"	"[K].tGWGPPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"500.28210"	"999.55693"	"999.55733"	"-0.40"	"-0.00020"	"6/48"	"6"	"48"	"7385607.27819824"	"HCD"	"MS2"	"18.33467"	"324.3"	"100.000"	"40.6184"	"11512"	"11512"	"11495"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"497.2"	""	"465.9"	""	"475.5"	""	"488.0"	""	"543.1"	"602.1"	""	"181"	"22"	"29.000"	"22.000"	"0.0578960026111797"	""	"0.003001"	"0.0325"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDIALP"	"[K].lEDIALP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"500.29932"	"999.59136"	"999.59238"	"-1.02"	"-0.00051"	"6/52"	"6"	"52"	"1045397.60479736"	"HCD"	"MS2"	"4.23315"	"18.3"	"100.000"	"113.2558"	"40837"	"40837"	"40815"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.0"	""	"20.1"	""	"24.7"	""	"30.2"	""	"41.0"	"37.2"	""	"213"	"62"	"30.000"	"23.000"	"7.48772020676282E-06"	""	"0.0001686"	"0.001301"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDIALP"	"[K].lEDIALP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"500.29956"	"999.59184"	"999.59238"	"-0.53"	"-0.00027"	"6/52"	"6"	"52"	"1212407.97125244"	"HCD"	"MS2"	"12.35608"	"20.4"	"100.000"	"113.1883"	"40796"	"40796"	"40777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"28.6"	""	"29.6"	""	"35.9"	""	"37.0"	"43.1"	""	"213"	"43"	"30.000"	"23.000"	"0.000534994857841342"	"19"	"0.0001991"	"0.003027"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEILATR"	"[K].ALIEILATR.[T]"	""	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.31311"	"999.61894"	"999.61971"	"-0.76"	"-0.00038"	"5/72"	"5"	"72"	"363880.608032227"	"HCD"	"MS2"	"50.20416"	"11.7"	"100.000"	"87.1483"	"30375"	"30375"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"12.3"	""	"18.5"	""	"19.3"	""	"19.9"	"26.3"	"NoQuanLabels"	"169"	"14"	"29.000"	"22.000"	"0.372268859663038"	"13"	"0.0065"	"0.08096"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEILATR"	"[K].ALIEILATR.[T]"	""	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.31360"	"999.61992"	"999.61971"	"0.21"	"0.00011"	"6/72"	"6"	"72"	"422087.347473145"	"HCD"	"MS2"	"56.53427"	"13.0"	"100.000"	"87.1360"	"30404"	"30404"	"30381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"16.5"	""	"17.4"	""	"24.1"	""	"21.5"	"32.1"	"NoQuanLabels"	"169"	"18"	"29.000"	"22.000"	"0.121578479862619"	"14"	"0.0005161"	"0.006674"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSVVVR"	"[K].dPSVVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"500.80176"	"1000.59624"	"1000.59886"	"-2.62"	"-0.00131"	"6/52"	"6"	"52"	"5041707.35552979"	"HCD"	"MS2"	"0"	"224.2"	"100.000"	"37.1937"	"10123"	"10123"	"10100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.5"	""	"264.6"	""	"295.9"	""	"373.0"	"15.2"	"436.0"	"440.7"	""	"373"	"18"	"32.000"	"25.000"	"0.297631460959651"	"25"	"0.003529"	"0.03878"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSVVVR"	"[K].dPSVVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"500.80179"	"1000.59630"	"1000.59886"	"-2.56"	"-0.00128"	"6/52"	"6"	"52"	"5178893.74432373"	"HCD"	"MS2"	"3.555114"	"229.7"	"100.000"	"37.1023"	"10123"	"10123"	"10106"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.6"	""	"271.8"	""	"309.6"	""	"382.8"	"14.9"	"444.2"	"458.8"	""	"373"	"20"	"32.000"	"25.000"	"0.182254741708259"	""	"0.00504"	"0.06397"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"500.80280"	"1000.59831"	"1000.59886"	"-0.55"	"-0.00027"	"5/54"	"5"	"54"	"17782615.3031006"	"HCD"	"MS2"	"0.2211108"	"476.8"	"65.533"	"49.9640"	"15340"	"15340"	"15323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"630.0"	""	"542.0"	""	"537.0"	""	"923.7"	""	"941.1"	"957.2"	""	"371"	"33"	"32.000"	"25.000"	"0.00940467763849576"	""	"0.00192"	"0.016"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"500.80289"	"1000.59850"	"1000.59886"	"-0.36"	"-0.00018"	"5/54"	"5"	"54"	"13664540.5870972"	"HCD"	"MS2"	"3.535866"	"435.8"	"82.246"	"50.3127"	"15447"	"15447"	"15430"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"595.6"	""	"500.7"	""	"466.2"	""	"826.9"	""	"872.8"	"883.2"	""	"371"	"33"	"32.000"	"25.000"	"0.00951357867303982"	""	"0.002525"	"0.0249"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPITGR"	"[K].lDPITGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"Q9JJ54"	"Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus OX=10116 GN=Hnrnpd PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"500.80304"	"1000.59880"	"1000.59886"	"-0.06"	"-0.00003"	"6/54"	"6"	"54"	"3249489.78088379"	"HCD"	"MS2"	"45.46265"	"153.4"	"100.000"	"50.2817"	"15469"	"15469"	"15447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.1"	""	"165.9"	""	"169.7"	""	"284.0"	""	"323.5"	"323.6"	""	"304"	"21"	"31.000"	"24.000"	"0.116907826923565"	"24"	"0.00296"	"0.03161"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"500.80829"	"1000.60930"	"1000.61009"	"-0.79"	"-0.00040"	"6/66"	"6"	"66"	"28405288.6541748"	"HCD"	"MS2"	"0"	"618.9"	"46.190"	"28.5451"	"6674"	"6674"	"6667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"912.5"	""	"882.5"	""	"871.2"	""	"986.3"	""	"1074.4"	"1137.3"	""	"310"	"35"	"31.000"	"24.000"	"0.00494688367540618"	"24"	"0.0001991"	"0.002612"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"500.80835"	"1000.60942"	"1000.61009"	"-0.67"	"-0.00034"	"6/66"	"6"	"66"	"5603126.82043457"	"HCD"	"MS2"	"1.041698"	"325.0"	"100.000"	"28.8578"	"6800"	"6800"	"6780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"405.5"	""	"428.0"	""	"447.9"	""	"532.3"	"3.9"	"652.4"	"613.2"	""	"310"	"30"	"31.000"	"24.000"	"0.0160447035835298"	"22"	"0.0001991"	"0.00369"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGQAAIR"	"[R].gVGQAAIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"500.80862"	"1000.60997"	"1000.61009"	"-0.12"	"-0.00006"	"7/66"	"7"	"66"	"30317746.927124"	"HCD"	"MS2"	"0"	"723.5"	"50.097"	"28.7665"	"6722"	"6722"	"6710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1016.2"	""	"1096.2"	""	"1005.3"	""	"1125.7"	""	"1270.8"	"1346.6"	""	"245"	"35"	"30.000"	"23.000"	"0.00412226672484976"	"23"	"0.0001991"	"0.003907"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"500.82089"	"1000.63451"	"1000.63525"	"-0.74"	"-0.00037"	"6/48"	"6"	"48"	"660637.785949707"	"HCD"	"MS2"	"16.69107"	"37.7"	"100.000"	"75.7036"	"25784"	"25784"	"25761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.5"	""	"47.8"	""	"56.7"	""	"64.8"	""	"74.6"	"67.4"	""	"210"	"20"	"30.000"	"23.000"	"0.102373911960326"	""	"0.006198"	"0.07545"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"500.82089"	"1000.63451"	"1000.63525"	"-0.74"	"-0.00037"	"5/48"	"5"	"48"	"3398857.40802002"	"HCD"	"MS2"	"4.016212"	"150.6"	"100.000"	"75.2970"	"25587"	"25587"	"25569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.9"	""	"192.8"	""	"207.3"	""	"263.8"	""	"261.5"	"292.7"	""	"210"	"39"	"30.000"	"23.000"	"0.00121671622396288"	""	"0.0005778"	"0.007089"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDAALR"	"[K].iIDAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"0"	"2"	"2"	"0.4412"	"0.0000"	"1"	"1"	"1"	"500.82092"	"1000.63457"	"1000.63525"	"-0.68"	"-0.00034"	"9/48"	"9"	"48"	"3396061.85241699"	"HCD"	"MS2"	"6.66299"	"147.0"	"100.000"	"69.0415"	"23048"	"23048"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.8"	""	"199.2"	""	"203.0"	""	"278.0"	"4.3"	"271.8"	"275.7"	""	"210"	"34"	"30.000"	"23.000"	"0.00387426478498658"	""	"0.0009352"	"0.00822"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"500.82104"	"1000.63481"	"1000.63525"	"-0.43"	"-0.00022"	"5/48"	"5"	"48"	"6773080.1338501"	"HCD"	"MS2"	"1.78264"	"266.1"	"100.000"	"75.0952"	"25536"	"25536"	"25518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"387.6"	""	"357.4"	""	"359.0"	""	"487.6"	""	"444.1"	"486.8"	""	"210"	"40"	"30.000"	"23.000"	"0.00098217595785493"	""	"0.0001991"	"0.005615"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"500.82108"	"1000.63487"	"1000.63525"	"-0.37"	"-0.00019"	"5/48"	"5"	"48"	"7564491.90112305"	"HCD"	"MS2"	"1.246915"	"313.4"	"100.000"	"74.9860"	"25461"	"25461"	"25446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"474.0"	""	"406.7"	""	"453.7"	""	"554.5"	""	"528.0"	"555.8"	""	"210"	"37"	"30.000"	"23.000"	"0.00232910624079023"	""	"0.001348"	"0.01059"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"500.82111"	"1000.63494"	"1000.63525"	"-0.31"	"-0.00016"	"9/48"	"9"	"48"	"688196.499023438"	"HCD"	"MS2"	"5.67917"	"39.6"	"100.000"	"75.6034"	"25712"	"25712"	"25693"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"47.8"	""	"56.8"	""	"67.0"	"0.5"	"79.2"	"76.1"	""	"161"	"23"	"29.000"	"22.000"	"0.0415715177264017"	"20"	"0.004959"	"0.06197"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDAALR"	"[K].iIDAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"500.82117"	"1000.63506"	"1000.63525"	"-0.19"	"-0.00009"	"10/48"	"10"	"48"	"3197166.31738281"	"HCD"	"MS2"	"5.356525"	"139.8"	"100.000"	"69.0292"	"23078"	"23078"	"23061"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.3"	""	"185.5"	""	"209.7"	""	"261.0"	"6.2"	"245.0"	"265.6"	""	"159"	"28"	"29.000"	"22.000"	"0.0135946217549678"	""	"0.001103"	"0.008945"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"500.82123"	"1000.63518"	"1000.63525"	"-0.07"	"-0.00003"	"5/48"	"5"	"48"	"1145232.32312012"	"HCD"	"MS2"	"33.5991"	"57.9"	"100.000"	"74.7817"	"25409"	"25409"	"25389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.7"	""	"74.6"	""	"83.2"	""	"101.8"	""	"99.5"	"103.0"	""	"159"	"39"	"29.000"	"22.000"	"0.00100778323335699"	""	"0.0001686"	"0.001127"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"500.82123"	"1000.63518"	"1000.63525"	"-0.07"	"-0.00003"	"5/48"	"5"	"48"	"3259047.13751221"	"HCD"	"MS2"	"0.6984815"	"138.8"	"100.000"	"75.3789"	"25652"	"25652"	"25635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.4"	"2.7"	"173.4"	""	"190.8"	""	"247.8"	""	"241.9"	"262.7"	""	"159"	"36"	"29.000"	"22.000"	"0.00193360218721368"	""	"0.0001991"	"0.002724"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDAALR"	"[K].iIDAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"500.82138"	"1000.63548"	"1000.63525"	"0.24"	"0.00012"	"8/48"	"8"	"48"	"1480060.31311035"	"HCD"	"MS2"	"5.264725"	"73.4"	"100.000"	"69.3456"	"23172"	"23172"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.8"	""	"100.6"	""	"104.7"	""	"130.8"	"1.7"	"138.6"	"134.5"	""	"159"	"29"	"29.000"	"22.000"	"0.0110755965834152"	""	"0.0001991"	"0.004565"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLALAIR"	"[R].dLALAIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"500.82141"	"1000.63555"	"1000.63525"	"0.30"	"0.00015"	"5/48"	"5"	"48"	"1072602.54833984"	"HCD"	"MS2"	"33.26149"	"53.7"	"100.000"	"74.6839"	"25338"	"25338"	"25325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.8"	""	"59.4"	""	"78.0"	""	"104.6"	"1.7"	"85.7"	"99.7"	""	"159"	"39"	"29.000"	"22.000"	"0.00101945281321154"	""	"0.0001991"	"0.00304"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIDAALR"	"[K].iIDAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"P11240"	"Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"500.82147"	"1000.63567"	"1000.63525"	"0.42"	"0.00021"	"9/48"	"9"	"48"	"1855679.7588501"	"HCD"	"MS2"	"6.613468"	"90.8"	"100.000"	"69.3311"	"23200"	"23200"	"23183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.1"	""	"126.5"	""	"126.7"	""	"166.3"	""	"167.7"	"175.6"	""	"159"	"36"	"29.000"	"22.000"	"0.00192471809215526"	""	"0.0003938"	"0.006246"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVILGR"	"[K].dVVILGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"500.82172"	"1000.63616"	"1000.63525"	"0.91"	"0.00045"	"5/48"	"5"	"48"	"583689.558105469"	"HCD"	"MS2"	"34.97731"	"36.7"	"100.000"	"62.0414"	"20208"	"20208"	"20183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.5"	""	"53.7"	""	"60.0"	""	"60.0"	"0.2"	"57.0"	"59.7"	""	"159"	"26"	"29.000"	"22.000"	"0.0183386401503245"	""	"0.0001991"	"0.004648"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVILGR"	"[K].dVVILGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"500.82172"	"1000.63616"	"1000.63525"	"0.91"	"0.00045"	"5/48"	"5"	"48"	"799400.784057617"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"62.0260"	"20235"	"20235"	"20208"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.5"	""	"62.9"	""	"70.9"	""	"66.4"	"1.6"	"80.5"	"77.0"	""	"159"	"31"	"29.000"	"22.000"	"0.00706914888697069"	""	"0.0001991"	"0.005462"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGLNR"	"[R].lEAGLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"501.30008"	"1001.59288"	"1001.59411"	"-1.23"	"-0.00061"	"6/50"	"6"	"50"	"6211714.85272217"	"HCD"	"MS2"	"18.34595"	"330.8"	"100.000"	"39.6742"	"11130"	"11130"	"11112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.7"	""	"396.7"	""	"377.3"	""	"600.0"	""	"719.3"	"692.6"	""	"408"	"23"	"33.000"	"26.000"	"0.0987711629871563"	""	"0.004672"	"0.05499"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSPLVSR"	"[K].nSPLVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"501.30014"	"1001.59300"	"1001.59411"	"-1.10"	"-0.00055"	"6/68"	"6"	"68"	"13961048.8187866"	"HCD"	"MS2"	"7.495111"	"631.6"	"100.000"	"28.2309"	"6549"	"6549"	"6529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"980.6"	""	"763.4"	""	"883.7"	""	"1035.0"	""	"1077.8"	"1242.2"	""	"406"	"24"	"33.000"	"26.000"	"0.0821289060145809"	""	"0.004213"	"0.04709"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSPLVSR"	"[K].nSPLVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"501.30029"	"1001.59331"	"1001.59411"	"-0.80"	"-0.00040"	"6/68"	"6"	"68"	"18506091.1272583"	"HCD"	"MS2"	"5.249484"	"752.1"	"100.000"	"28.4639"	"6599"	"6599"	"6581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1153.6"	""	"901.4"	""	"1051.8"	""	"1257.4"	""	"1310.3"	"1450.5"	""	"404"	"25"	"33.000"	"26.000"	"0.0715074628988538"	""	"0.004959"	"0.06236"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGLNR"	"[R].lEAGLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"501.30054"	"1001.59380"	"1001.59411"	"-0.31"	"-0.00016"	"4/50"	"4"	"50"	"6220503.74517822"	"HCD"	"MS2"	"11.55331"	"329.3"	"100.000"	"39.5946"	"11132"	"11132"	"11117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.8"	""	"400.7"	""	"366.7"	""	"606.7"	""	"702.5"	"699.3"	""	"373"	"23"	"32.000"	"25.000"	"0.0902981465544346"	""	"0.004234"	"0.04825"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISAAAALR"	"[R].iSAAAALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C865"	"Mitogen-activated protein kinase 7 OS=Rattus norvegicus OX=10116 GN=Mapk7 PE=1 SV=1"	"P0C865"	"Mitogen-activated protein kinase 7 OS=Rattus norvegicus OX=10116 GN=Mapk7 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"3"	"501.31305"	"1001.61882"	"1001.63050"	"-11.65"	"-0.00584"	"10/56"	"10"	"56"	"3817951.64562988"	"HCD"	"MS2"	"8.125407"	"176.6"	"100.000"	"68.9162"	"23031"	"23031"	"23016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.7"	""	"209.5"	""	"215.7"	""	"351.3"	""	"363.4"	"347.3"	""	"339"	"26"	"32.000"	"25.000"	"0.0401023388723836"	""	"0.008792"	"0.1111"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLR"	"[R].aDAEVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"501.79227"	"1002.57726"	"1002.57813"	"-0.87"	"-0.00043"	"6/52"	"6"	"52"	"7951335.66247559"	"HCD"	"MS2"	"19.47802"	"425.5"	"100.000"	"36.3007"	"9798"	"9798"	"9791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"567.0"	"3.0"	"511.5"	""	"530.6"	""	"799.4"	""	"773.0"	"852.1"	""	"520"	"27"	"34.000"	"27.000"	"0.0568818022226883"	""	"0.002525"	"0.02501"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLR"	"[R].aDAEVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"501.79233"	"1002.57738"	"1002.57813"	"-0.74"	"-0.00037"	"9/52"	"9"	"52"	"8767467.02667236"	"HCD"	"MS2"	"11.65703"	"437.3"	"100.000"	"36.4218"	"9810"	"9810"	"9799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"569.1"	""	"514.3"	""	"567.9"	""	"785.3"	"0.6"	"819.3"	"890.7"	""	"520"	"25"	"34.000"	"27.000"	"0.0883025708735061"	""	"0.002711"	"0.0286"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEDLGR"	"[K].aLEDLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"501.79239"	"1002.57750"	"1002.57813"	"-0.62"	"-0.00031"	"6/50"	"6"	"50"	"3253015.36816406"	"HCD"	"MS2"	"26.77527"	"173.3"	"100.000"	"48.2516"	"14608"	"14608"	"14589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"335.2"	""	"236.1"	""	"259.7"	""	"231.0"	""	"289.2"	"288.4"	""	"520"	"19"	"34.000"	"27.000"	"0.32357379906056"	"21"	"0.00307"	"0.034"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEDLGR"	"[K].aLEDLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"501.79266"	"1002.57805"	"1002.57813"	"-0.07"	"-0.00004"	"6/50"	"6"	"50"	"3617058.20550537"	"HCD"	"MS2"	"41.39811"	"186.0"	"100.000"	"48.0186"	"14551"	"14551"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.8"	""	"241.6"	""	"250.8"	""	"260.6"	""	"326.9"	"325.5"	""	"404"	"20"	"33.000"	"26.000"	"0.187651210129547"	"20"	"0.002189"	"0.02052"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLSIAR"	"[K].vDLSIAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"501.81030"	"1002.61333"	"1002.61451"	"-1.18"	"-0.00059"	"5/52"	"5"	"52"	"4457836.19433594"	"HCD"	"MS2"	"10.10909"	"191.5"	"100.000"	"62.6413"	"20485"	"20485"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.6"	""	"163.0"	""	"128.7"	""	"475.9"	"1.0"	"520.5"	"386.3"	""	"393"	"28"	"32.000"	"25.000"	"0.0313590252432018"	""	"0.001615"	"0.01431"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVADTR"	"[K].lVVADTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"501.81046"	"1002.61363"	"1002.61451"	"-0.87"	"-0.00044"	"5/50"	"5"	"50"	"7674748.52600098"	"HCD"	"MS2"	"21.56429"	"346.7"	"100.000"	"41.6037"	"11908"	"11908"	"11890"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"535.8"	""	"491.4"	""	"485.9"	""	"501.2"	""	"617.8"	"651.3"	""	"388"	"40"	"32.000"	"25.000"	"0.0019534474375725"	""	"0.001488"	"0.01198"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVADTR"	"[K].lVVADTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"501.81058"	"1002.61388"	"1002.61451"	"-0.63"	"-0.00032"	"5/50"	"5"	"50"	"9532398.89593506"	"HCD"	"MS2"	"1.277589"	"390.8"	"93.000"	"41.9036"	"12030"	"12030"	"12012"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"569.6"	""	"511.3"	""	"543.9"	""	"632.7"	"5.7"	"708.8"	"730.0"	""	"388"	"41"	"32.000"	"25.000"	"0.00139894850961482"	""	"0.0009352"	"0.008294"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVLISR"	"[K].gEVLISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"501.81061"	"1002.61394"	"1002.61451"	"-0.57"	"-0.00029"	"6/56"	"6"	"56"	"6227258.76513672"	"HCD"	"MS2"	"17.63621"	"352.4"	"100.000"	"41.3168"	"11792"	"11792"	"11774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"464.3"	""	"462.9"	""	"481.3"	""	"592.9"	"4.2"	"645.8"	"689.6"	""	"388"	"18"	"32.000"	"25.000"	"0.292955549907845"	"22"	"0.004392"	"0.0517"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLSIAR"	"[K].vDLSIAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.2692"	"0.0000"	"1"	"1"	"1"	"501.81067"	"1002.61406"	"1002.61451"	"-0.45"	"-0.00022"	"6/52"	"6"	"52"	"3671633.38671875"	"HCD"	"MS2"	"6.924145"	"168.9"	"100.000"	"62.3374"	"20362"	"20362"	"20345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.6"	""	"170.3"	""	"116.1"	""	"427.7"	""	"424.8"	"335.1"	""	"388"	"26"	"32.000"	"25.000"	"0.0435313093213857"	""	"0.002559"	"0.02562"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVLISR"	"[K].gEVLISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"501.81070"	"1002.61412"	"1002.61451"	"-0.39"	"-0.00019"	"6/56"	"6"	"56"	"7587865.72418213"	"HCD"	"MS2"	"7.055631"	"408.3"	"100.000"	"41.2137"	"11788"	"11788"	"11766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"574.5"	"4.0"	"526.5"	""	"530.1"	""	"672.0"	""	"776.5"	"790.0"	""	"388"	"26"	"32.000"	"25.000"	"0.0477311315204639"	"24"	"0.003317"	"0.03628"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLSIAR"	"[K].vDLSIAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"501.81076"	"1002.61424"	"1002.61451"	"-0.27"	"-0.00013"	"6/52"	"6"	"52"	"4525565.51971436"	"HCD"	"MS2"	"11.25679"	"191.5"	"100.000"	"62.7280"	"20487"	"20487"	"20469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.4"	""	"168.6"	""	"141.5"	""	"478.3"	""	"506.0"	"384.0"	""	"353"	"26"	"32.000"	"25.000"	"0.0438272993084668"	""	"0.001951"	"0.01711"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVADTR"	"[K].lVVADTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"501.81079"	"1002.61431"	"1002.61451"	"-0.21"	"-0.00010"	"5/50"	"5"	"50"	"14596727.5443115"	"HCD"	"MS2"	"0.4411607"	"569.2"	"100.000"	"41.6002"	"11941"	"11941"	"11925"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"891.3"	""	"813.2"	""	"828.9"	""	"845.0"	""	"983.9"	"1026.8"	""	"337"	"41"	"32.000"	"25.000"	"0.00131099158850207"	""	"0.0001991"	"0.005944"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDLSIAR"	"[K].vDLSIAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"501.81091"	"1002.61455"	"1002.61451"	"0.04"	"0.00002"	"6/52"	"6"	"52"	"3558259.5927124"	"HCD"	"MS2"	"11.28069"	"163.3"	"100.000"	"62.3991"	"20353"	"20353"	"20333"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.7"	""	"154.6"	""	"112.2"	""	"420.0"	""	"416.0"	"324.2"	""	"337"	"26"	"32.000"	"25.000"	"0.0443200156634372"	""	"0.00212"	"0.01931"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVTALDR"	"[K].vVTALDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"501.81097"	"1002.61467"	"1002.61451"	"0.16"	"0.00008"	"6/54"	"6"	"54"	"7663756.27453613"	"HCD"	"MS2"	"19.67091"	"371.4"	"100.000"	"45.1350"	"13381"	"13381"	"13360"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"516.7"	""	"495.5"	""	"498.2"	""	"618.4"	"11.4"	"694.4"	"685.1"	""	"342"	"26"	"32.000"	"25.000"	"0.0459193900207604"	""	"0.002189"	"0.02139"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVAEPR"	"[K].fGVAEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"502.78955"	"1004.57182"	"1004.57265"	"-0.82"	"-0.00041"	"5/48"	"5"	"48"	"3518063.86474609"	"HCD"	"MS2"	"12.57396"	"168.7"	"100.000"	"44.7054"	"13206"	"13206"	"13188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.2"	""	"231.8"	""	"246.9"	""	"246.3"	"0.5"	"309.4"	"353.3"	""	"469"	"24"	"33.000"	"26.000"	"0.086924629258014"	"25"	"0.002588"	"0.02641"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVAEPR"	"[K].fGVAEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"502.78973"	"1004.57219"	"1004.57265"	"-0.45"	"-0.00023"	"5/48"	"5"	"48"	"6995323.47967529"	"HCD"	"MS2"	"15.01707"	"335.3"	"100.000"	"44.6435"	"13147"	"13147"	"13130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"414.9"	""	"478.4"	""	"503.0"	""	"520.1"	""	"609.9"	"652.1"	""	"486"	"26"	"33.000"	"26.000"	"0.0591025574204937"	""	"0.00307"	"0.03378"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVAEPR"	"[K].fGVAEPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"502.79028"	"1004.57329"	"1004.57265"	"0.64"	"0.00032"	"5/48"	"5"	"48"	"6019025.22393799"	"HCD"	"MS2"	"40.76427"	"309.9"	"100.000"	"44.4189"	"13091"	"13091"	"13077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"383.4"	"2.6"	"443.2"	""	"441.6"	""	"494.9"	""	"567.6"	"607.8"	""	"460"	"26"	"33.000"	"26.000"	"0.0630562059543413"	"24"	"0.003255"	"0.03489"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFLVR"	"[R].dGAFLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"503.79688"	"1006.58647"	"1006.58830"	"-1.81"	"-0.00091"	"6/48"	"6"	"48"	"1149110.69604492"	"HCD"	"MS2"	"0"	"71.4"	"100.000"	"55.8447"	"17698"	"17698"	"17676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.7"	""	"105.6"	""	"96.1"	""	"121.5"	""	"134.7"	"120.9"	""	"299"	"15"	"31.000"	"24.000"	"0.473850335725002"	""	"0.005673"	"0.07082"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGVDIR"	"[R].fAGVDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"503.79706"	"1006.58684"	"1006.58830"	"-1.45"	"-0.00073"	"4/48"	"4"	"48"	"1859768.02648926"	"HCD"	"MS2"	"46.23528"	"89.5"	"100.000"	"67.4944"	"22453"	"22453"	"22432"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.5"	""	"121.1"	""	"138.6"	""	"141.3"	""	"169.9"	"149.9"	""	"291"	"29"	"31.000"	"24.000"	"0.0184443346482317"	""	"0.001348"	"0.01102"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFLVR"	"[R].dGAFLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"503.79712"	"1006.58696"	"1006.58830"	"-1.33"	"-0.00067"	"6/48"	"6"	"48"	"3979819.06561279"	"HCD"	"MS2"	"21.17132"	"157.7"	"100.000"	"55.2587"	"17493"	"17493"	"17474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.9"	""	"210.9"	""	"215.5"	""	"262.9"	""	"274.6"	"292.8"	""	"291"	"12"	"31.000"	"24.000"	"0.924406505844287"	"21"	"0.004893"	"0.06078"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGVDIR"	"[R].fAGVDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"503.79736"	"1006.58745"	"1006.58830"	"-0.84"	"-0.00042"	"4/48"	"4"	"48"	"2225375.37969971"	"HCD"	"MS2"	"10.00736"	"98.1"	"100.000"	"68.1548"	"22688"	"22688"	"22668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.6"	""	"137.9"	""	"143.8"	""	"160.1"	""	"185.3"	"174.0"	""	"291"	"29"	"31.000"	"24.000"	"0.0172529352858322"	""	"0.002189"	"0.02065"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGVDIR"	"[R].fAGVDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"503.79745"	"1006.58763"	"1006.58830"	"-0.66"	"-0.00033"	"4/48"	"4"	"48"	"11190621.5535278"	"HCD"	"MS2"	"2.10095"	"478.8"	"100.000"	"67.8482"	"22565"	"22565"	"22552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"661.1"	""	"670.3"	""	"785.4"	""	"829.3"	""	"847.0"	"738.0"	""	"291"	"30"	"31.000"	"24.000"	"0.0138631841865441"	""	"0.003317"	"0.03646"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGVDIR"	"[R].fAGVDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"503.79764"	"1006.58800"	"1006.58830"	"-0.30"	"-0.00015"	"4/48"	"4"	"48"	"4708728.3536377"	"HCD"	"MS2"	"3.403775"	"200.5"	"100.000"	"68.0659"	"22685"	"22685"	"22668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"278.7"	""	"285.9"	""	"307.1"	""	"331.9"	""	"366.6"	"332.0"	""	"291"	"30"	"31.000"	"24.000"	"0.0146171597485507"	""	"0.002711"	"0.02846"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGVDIR"	"[R].fAGVDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"503.79767"	"1006.58806"	"1006.58830"	"-0.23"	"-0.00012"	"4/48"	"4"	"48"	"9659473.15075684"	"HCD"	"MS2"	"4.684081"	"408.9"	"100.000"	"67.7733"	"22565"	"22565"	"22550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"574.9"	""	"574.0"	""	"642.3"	""	"722.6"	""	"734.2"	"621.6"	""	"291"	"30"	"31.000"	"24.000"	"0.0139914586504823"	""	"0.004751"	"0.05601"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGVDIR"	"[R].fAGVDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"503.79779"	"1006.58830"	"1006.58830"	"0.01"	"0.00000"	"4/48"	"4"	"48"	"3415592.46813965"	"HCD"	"MS2"	"23.1906"	"156.0"	"100.000"	"67.5509"	"22444"	"22444"	"22427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.9"	""	"227.2"	""	"249.7"	""	"269.6"	""	"273.6"	"234.5"	""	"259"	"27"	"31.000"	"24.000"	"0.0262584912178006"	""	"0.002189"	"0.02112"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFANIR"	"[R].gTFANIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"504.29474"	"1007.58220"	"1007.58355"	"-1.33"	"-0.00067"	"6/52"	"6"	"52"	"5076017.30224609"	"HCD"	"MS2"	"11.45007"	"327.4"	"100.000"	"42.1846"	"12145"	"12145"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"507.6"	""	"461.0"	""	"462.0"	""	"549.9"	""	"565.6"	"555.6"	""	"258"	"16"	"31.000"	"24.000"	"0.30240551717627"	"18"	"0.005507"	"0.06985"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFANIR"	"[R].gTFANIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"504.29532"	"1007.58336"	"1007.58355"	"-0.18"	"-0.00009"	"6/52"	"6"	"52"	"4875701.63232422"	"HCD"	"MS2"	"15.43485"	"307.8"	"100.000"	"42.0440"	"12122"	"12122"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"475.3"	""	"434.9"	""	"448.3"	""	"497.2"	""	"524.9"	"532.2"	""	"243"	"17"	"30.000"	"23.000"	"0.234734150517556"	"18"	"0.004234"	"0.04963"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMMEGGR"	"[K].vMMEGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"504.76151"	"1008.51573"	"1008.51679"	"-1.05"	"-0.00053"	"5/48"	"5"	"48"	"3713568.30773926"	"HCD"	"MS2"	"23.85977"	"244.4"	"100.000"	"33.9789"	"8824"	"8824"	"8802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"350.1"	""	"327.7"	""	"330.4"	""	"363.2"	""	"497.1"	"454.8"	""	"415"	"24"	"33.000"	"26.000"	"0.0767393473044052"	""	"0.002189"	"0.02141"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMMEGGR"	"[K].vMMEGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"504.76160"	"1008.51592"	"1008.51679"	"-0.86"	"-0.00044"	"6/48"	"6"	"48"	"2805479.90869141"	"HCD"	"MS2"	"19.81804"	"197.9"	"100.000"	"33.8293"	"8801"	"8801"	"8777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"273.6"	""	"263.0"	""	"275.1"	""	"272.0"	""	"414.3"	"380.5"	""	"441"	"24"	"33.000"	"26.000"	"0.0944949487476354"	""	"0.00307"	"0.03423"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGDAFR"	"[R].lTGDAFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498E0"	"Thioredoxin domain-containing protein 12 OS=Rattus norvegicus OX=10116 GN=Txndc12 PE=2 SV=2"	"Q498E0"	"Thioredoxin domain-containing protein 12 OS=Rattus norvegicus OX=10116 GN=Txndc12 PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"504.78696"	"1008.56664"	"1008.56756"	"-0.92"	"-0.00046"	"5/52"	"5"	"52"	"3729126.47705078"	"HCD"	"MS2"	"6.49103"	"181.4"	"100.000"	"50.8740"	"15676"	"15676"	"15653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.7"	""	"204.1"	""	"250.0"	""	"355.6"	""	"344.7"	"355.9"	""	"324"	"30"	"32.000"	"25.000"	"0.0175192300110266"	"23"	"0.001615"	"0.01364"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEAGYR"	"[R].lAEAGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.78699"	"1008.56670"	"1008.56756"	"-0.86"	"-0.00043"	"6/48"	"6"	"48"	"3702298.840271"	"HCD"	"MS2"	"44.44761"	"222.2"	"100.000"	"36.5208"	"9886"	"9886"	"9870"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.9"	""	"300.5"	""	"334.9"	""	"297.4"	""	"396.1"	"442.9"	""	"324"	"8"	"32.000"	"25.000"	"2.75749678359982"	"13"	"0.00455"	"0.05378"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAEAVAR"	"[K].yAEAVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"504.78714"	"1008.56700"	"1008.56756"	"-0.55"	"-0.00028"	"5/48"	"5"	"48"	"6850820.7890625"	"HCD"	"MS2"	"21.08275"	"415.7"	"100.000"	"30.0873"	"7297"	"7297"	"7287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"565.3"	""	"528.7"	""	"525.4"	""	"508.0"	""	"622.3"	"1206.5"	""	"324"	"28"	"32.000"	"25.000"	"0.0282823188773122"	"22"	"0.001951"	"0.01705"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGDAFR"	"[R].lTGDAFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498E0"	"Thioredoxin domain-containing protein 12 OS=Rattus norvegicus OX=10116 GN=Txndc12 PE=2 SV=2"	"Q498E0"	"Thioredoxin domain-containing protein 12 OS=Rattus norvegicus OX=10116 GN=Txndc12 PE=2 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"504.78717"	"1008.56706"	"1008.56756"	"-0.49"	"-0.00025"	"5/52"	"5"	"52"	"3643923.76794434"	"HCD"	"MS2"	"4.670447"	"184.2"	"100.000"	"50.5438"	"15576"	"15576"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.9"	""	"211.9"	""	"248.3"	""	"351.8"	""	"343.4"	"362.7"	""	"324"	"31"	"32.000"	"25.000"	"0.0118717574368502"	"24"	"0.0009352"	"0.008434"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGDAFR"	"[R].lTGDAFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498E0"	"Thioredoxin domain-containing protein 12 OS=Rattus norvegicus OX=10116 GN=Txndc12 PE=2 SV=2"	"Q498E0"	"Thioredoxin domain-containing protein 12 OS=Rattus norvegicus OX=10116 GN=Txndc12 PE=2 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"504.78732"	"1008.56737"	"1008.56756"	"-0.19"	"-0.00010"	"5/52"	"5"	"52"	"1686135.59686279"	"HCD"	"MS2"	"19.06637"	"101.4"	"100.000"	"50.8864"	"15715"	"15715"	"15686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.1"	""	"118.9"	""	"121.4"	""	"177.8"	""	"208.3"	"204.9"	""	"324"	"7"	"32.000"	"25.000"	"3.50360400843778"	"18"	"0.00981"	"0.1313"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEAGYR"	"[R].lAEAGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.78732"	"1008.56737"	"1008.56756"	"-0.19"	"-0.00010"	"6/48"	"6"	"48"	"5365388.03216553"	"HCD"	"MS2"	"25.87688"	"296.6"	"100.000"	"36.5640"	"9866"	"9866"	"9854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"469.1"	""	"410.5"	""	"420.6"	""	"415.3"	""	"520.7"	"577.2"	""	"324"	"12"	"32.000"	"25.000"	"0.945181068923467"	"13"	"0.004213"	"0.04733"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAEAVAR"	"[K].yAEAVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"504.78741"	"1008.56755"	"1008.56756"	"-0.01"	"0.00000"	"5/48"	"5"	"48"	"6743757.97796631"	"HCD"	"MS2"	"27.05495"	"401.4"	"100.000"	"30.2309"	"7315"	"7315"	"7302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"554.5"	""	"530.3"	""	"490.2"	""	"494.1"	""	"592.8"	"1155.1"	""	"289"	"28"	"31.000"	"24.000"	"0.024596190446307"	"22"	"0.002035"	"0.01771"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVGSGSR"	"[K].fAVGSGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"505.28448"	"1009.56169"	"1009.56281"	"-1.11"	"-0.00056"	"6/60"	"6"	"60"	"9311953.1184082"	"HCD"	"MS2"	"4.154645"	"469.9"	"100.000"	"34.9793"	"9227"	"9227"	"9216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"744.2"	""	"644.8"	""	"665.3"	""	"713.5"	"6.6"	"808.7"	"864.8"	""	"255"	"38"	"31.000"	"24.000"	"0.00221060009713653"	"24"	"0.0001991"	"0.00231"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVGSGSR"	"[K].fAVGSGSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"505.28497"	"1009.56267"	"1009.56281"	"-0.14"	"-0.00007"	"6/60"	"6"	"60"	"10351416.4653931"	"HCD"	"MS2"	"8.27997"	"537.3"	"100.000"	"34.8441"	"9211"	"9211"	"9201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"856.2"	""	"771.3"	""	"748.8"	""	"827.3"	""	"909.9"	"974.1"	""	"252"	"38"	"31.000"	"24.000"	"0.00219973591267984"	"24"	"0.0001686"	"0.001034"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGNFGGSR"	"[K].sGNFGGSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"505.76407"	"1010.52086"	"1010.52167"	"-0.80"	"-0.00041"	"6/78"	"6"	"78"	"11757140.0031128"	"HCD"	"MS2"	"37.03975"	"734.9"	"100.000"	"21.5141"	"3921"	"3921"	"3899"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"852.0"	""	"822.6"	""	"667.6"	""	"1606.8"	""	"1664.3"	"1375.7"	""	"310"	"27"	"31.000"	"24.000"	"0.0305022374904561"	""	"0.0001991"	"0.0059"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSSFLV"	"[K].qTSSFLV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"505.78915"	"1010.57103"	"1010.57198"	"-0.94"	"-0.00047"	"6/52"	"6"	"52"	"1541553.17657471"	"HCD"	"MS2"	"4.82876"	"23.6"	"100.000"	"90.3707"	"31669"	"31669"	"31657"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"27.4"	""	"23.6"	""	"43.5"	""	"64.2"	"47.2"	""	"234"	"39"	"30.000"	"23.000"	"0.001409892050235"	"16"	"0.002035"	"0.01791"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSSFLV"	"[K].qTSSFLV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.78937"	"1010.57146"	"1010.57198"	"-0.51"	"-0.00026"	"6/52"	"6"	"52"	"1772238.41253662"	"HCD"	"MS2"	"5.128654"	"24.3"	"100.000"	"90.2337"	"31653"	"31653"	"31637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"25.5"	""	"27.7"	""	"46.9"	"0.3"	"60.3"	"46.9"	""	"234"	"44"	"30.000"	"23.000"	"0.000487737178660293"	"15"	"0.0001991"	"0.004966"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFSATVR"	"[R].tFSATVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"505.79440"	"1010.58153"	"1010.58321"	"-1.66"	"-0.00084"	"5/56"	"5"	"56"	"7277474.51330566"	"HCD"	"MS2"	"13.33347"	"415.8"	"100.000"	"37.2305"	"10138"	"10138"	"10115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"584.5"	""	"533.0"	""	"584.2"	""	"730.6"	"8.0"	"805.4"	"694.1"	""	"212"	"25"	"30.000"	"23.000"	"0.0319378638563729"	"17"	"0.003568"	"0.03982"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPQLLK"	"[K].SPPQLLk.[T]"	"K7(TMT6plex)"	"1"	"1"	"Q6AXY3"	"Testis-expressed protein 29 OS=Rattus norvegicus OX=10116 GN=Tex29 PE=2 SV=1"	"Q6AXY3"	"Testis-expressed protein 29 OS=Rattus norvegicus OX=10116 GN=Tex29 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.32324"	"1011.63921"	"1011.64000"	"-0.78"	"-0.00039"	"4/54"	"4"	"54"	"507178.127502441"	"HCD"	"MS2"	"15.61927"	"26.8"	"100.000"	"95.3531"	"33683"	"33683"	"33665"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"30.6"	""	"40.8"	""	"41.3"	""	"55.1"	"51.2"	""	"83"	"17"	"26.000"	"19.000"	"0.0893404419910614"	"14"	"0.004314"	"0.05053"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPNVQR"	"[K].gLPNVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"506.80777"	"1012.60826"	"1012.61009"	"-1.81"	"-0.00092"	"6/56"	"6"	"56"	"7898866.60931396"	"HCD"	"MS2"	"12.31001"	"390.1"	"100.000"	"37.1868"	"10120"	"10120"	"10100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"605.8"	""	"542.7"	""	"556.4"	""	"591.0"	""	"699.6"	"702.4"	""	"192"	"14"	"29.000"	"22.000"	"0.372624351351023"	""	"0.004959"	"0.06258"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPNVQR"	"[K].gLPNVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"506.80783"	"1012.60838"	"1012.61009"	"-1.69"	"-0.00085"	"4/56"	"4"	"56"	"11286444.6086426"	"HCD"	"MS2"	"9.257817"	"460.3"	"100.000"	"37.4715"	"10236"	"10236"	"10219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"755.5"	""	"612.8"	""	"669.2"	""	"651.3"	""	"830.9"	"844.8"	""	"192"	"25"	"29.000"	"22.000"	"0.0337498022907166"	""	"0.003208"	"0.03455"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPNVQR"	"[K].gLPNVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"506.80792"	"1012.60857"	"1012.61009"	"-1.51"	"-0.00076"	"6/56"	"6"	"56"	"7729207.03637695"	"HCD"	"MS2"	"10.61025"	"372.2"	"100.000"	"37.0954"	"10120"	"10120"	"10106"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"598.0"	""	"502.5"	""	"533.9"	""	"572.7"	""	"664.5"	"655.4"	""	"192"	"14"	"29.000"	"22.000"	"0.373483339194509"	""	"0.003818"	"0.04124"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLPNVQR"	"[K].gLPNVQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"506.80838"	"1012.60948"	"1012.61009"	"-0.60"	"-0.00031"	"4/56"	"4"	"56"	"12329248.5637207"	"HCD"	"MS2"	"6.395706"	"536.7"	"92.704"	"37.4030"	"10245"	"10245"	"10229"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"885.5"	""	"710.7"	""	"783.5"	""	"771.3"	""	"983.7"	"949.6"	""	"191"	"24"	"29.000"	"22.000"	"0.0339627909233381"	""	"0.002525"	"0.02371"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELTAH"	"[K].tIELTAH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"P47864"	"Aquaporin-5 OS=Rattus norvegicus OX=10116 GN=Aqp5 PE=2 SV=1"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"507.29462"	"1013.58196"	"1013.58288"	"-0.91"	"-0.00046"	"6/58"	"6"	"58"	"5747013.30487061"	"HCD"	"MS2"	"11.45767"	"138.7"	"100.000"	"47.8051"	"14426"	"14426"	"14406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.0"	""	"164.6"	""	"157.2"	""	"265.8"	""	"231.7"	"365.7"	""	"199"	"64"	"29.000"	"22.000"	"4.12879272421192E-06"	""	"0.0001686"	"0.001174"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPITVVR"	"[R].tPITVVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"507.82880"	"1014.65032"	"1014.65090"	"-0.57"	"-0.00029"	"6/54"	"6"	"54"	"18551979.7570801"	"HCD"	"MS2"	"21.42859"	"439.8"	"63.064"	"44.0863"	"12956"	"12956"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"565.0"	""	"569.7"	""	"558.5"	""	"796.5"	"1.2"	"799.6"	"879.8"	""	"221"	"19"	"30.000"	"23.000"	"0.140398438625544"	"17"	"0.002799"	"0.0296"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPITVVR"	"[R].tPITVVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"507.82895"	"1014.65062"	"1014.65090"	"-0.27"	"-0.00014"	"6/54"	"6"	"54"	"15702612.5602417"	"HCD"	"MS2"	"18.72717"	"627.1"	"100.000"	"44.2649"	"12994"	"12994"	"12977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"809.2"	""	"773.6"	""	"815.7"	""	"1118.1"	"0.6"	"1165.9"	"1263.9"	""	"221"	"21"	"30.000"	"23.000"	"0.0879756082211137"	"18"	"0.002462"	"0.02308"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDILAR"	"[R].aQDILAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"508.30807"	"1015.60887"	"1015.60976"	"-0.87"	"-0.00044"	"6/58"	"6"	"58"	"1979780.49914551"	"HCD"	"MS2"	"13.47102"	"109.1"	"100.000"	"43.4907"	"12678"	"12678"	"12656"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.7"	""	"123.8"	""	"150.1"	""	"173.3"	"0.1"	"209.8"	"243.2"	""	"412"	"24"	"33.000"	"26.000"	"0.0823886184507861"	"24"	"0.00212"	"0.01953"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEGMR"	"[K].vVPEGMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"508.79153"	"1016.57579"	"1016.57602"	"-0.22"	"-0.00011"	"4/48"	"4"	"48"	"24190204.8764648"	"HCD"	"MS2"	"30.86522"	"658.2"	"54.762"	"40.9376"	"11643"	"11643"	"11626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1211.8"	""	"978.0"	""	"798.7"	""	"791.6"	""	"1196.8"	"1259.9"	""	"503"	"15"	"34.000"	"27.000"	"0.73036169759781"	"17"	"0.008405"	"0.1074"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEGMR"	"[K].vVPEGMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"508.79160"	"1016.57591"	"1016.57602"	"-0.10"	"-0.00005"	"4/48"	"4"	"48"	"22566674.2911987"	"HCD"	"MS2"	"29.74857"	"736.0"	"66.496"	"40.8077"	"11625"	"11625"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1322.4"	""	"1107.2"	""	"891.0"	""	"892.0"	""	"1341.2"	"1430.0"	""	"503"	"14"	"34.000"	"27.000"	"0.930117872147369"	"16"	"0.005871"	"0.07265"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVNGLR"	"[K].dIVnGLR.[S]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"3"	"508.80060"	"1016.59392"	"1016.59378"	"0.14"	"0.00007"	"5/54"	"5"	"54"	"1744962.27172852"	"HCD"	"MS2"	"13.23867"	"85.4"	"100.000"	"59.2396"	"19107"	"19107"	"19089"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.9"	""	"109.6"	""	"95.6"	""	"160.2"	"1.9"	"164.2"	"166.0"	""	"436"	"34"	"33.000"	"26.000"	"0.00951604514283561"	""	"0.001217"	"0.009482"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEAISR"	"[R].lVEAISR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"508.81796"	"1016.62865"	"1016.63016"	"-1.49"	"-0.00076"	"4/54"	"4"	"54"	"2442112.97375488"	"HCD"	"MS2"	"25.03787"	"115.7"	"100.000"	"53.5202"	"16784"	"16784"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.7"	"2.6"	"158.9"	""	"159.5"	""	"196.2"	""	"200.7"	"215.0"	""	"388"	"22"	"32.000"	"25.000"	"0.124108558083634"	"24"	"0.002328"	"0.02193"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IESLGLR"	"[K].iESLGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"508.81818"	"1016.62908"	"1016.63016"	"-1.07"	"-0.00054"	"5/50"	"5"	"50"	"2210117.13922119"	"HCD"	"MS2"	"17.54713"	"95.6"	"100.000"	"72.6485"	"24511"	"24511"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.9"	""	"133.8"	""	"135.5"	""	"127.4"	""	"174.0"	"184.4"	""	"388"	"23"	"32.000"	"25.000"	"0.0868563810102143"	""	"0.004213"	"0.04724"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQSIGIR"	"[].lqSIGIR.[]"	"N-Term(TMT6plex); Q2(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"508.81818"	"1016.62908"	"1016.63016"	"-1.07"	"-0.00054"	"5/58"	"5"	"58"	"2210117.13922119"	"HCD"	"MS2"	"17.54713"	"95.6"	"100.000"	"72.6485"	"24511"	"24511"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.9"	""	"133.8"	""	"135.5"	""	"127.4"	""	"174.0"	"184.4"	""	"388"	"23"	"32.000"	"25.000"	"0.0868563810102143"	""	"0.004213"	"0.04725"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LTDIGIR"	"[K].lTDIGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"508.81818"	"1016.62908"	"1016.63016"	"-1.07"	"-0.00054"	"6/50"	"6"	"50"	"2210117.13922119"	"HCD"	"MS2"	"17.54713"	"95.6"	"100.000"	"72.6485"	"24511"	"24511"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.9"	""	"133.8"	""	"135.5"	""	"127.4"	""	"174.0"	"184.4"	""	"388"	"23"	"32.000"	"25.000"	"0.0868563810102143"	""	"0.002328"	"0.02198"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEAISR"	"[R].lVEAISR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"508.81818"	"1016.62908"	"1016.63016"	"-1.07"	"-0.00054"	"5/54"	"5"	"54"	"6611721.23773193"	"HCD"	"MS2"	"2.721161"	"286.7"	"100.000"	"53.8378"	"16913"	"16913"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"378.6"	""	"366.5"	""	"393.6"	""	"474.3"	""	"554.7"	"551.5"	""	"388"	"28"	"32.000"	"25.000"	"0.0344986205547551"	""	"0.002189"	"0.02093"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEAISR"	"[R].lVEAISR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"3"	"508.81824"	"1016.62920"	"1016.63016"	"-0.95"	"-0.00048"	"4/54"	"4"	"54"	"2853306.98059082"	"HCD"	"MS2"	"28.46849"	"136.5"	"100.000"	"53.8311"	"16877"	"16877"	"16857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.7"	""	"184.7"	""	"188.6"	""	"222.2"	"0.8"	"256.2"	"263.7"	""	"388"	"22"	"32.000"	"25.000"	"0.112150633196709"	""	"0.002588"	"0.02646"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTLLAR"	"[RK].dVTLLAR.[LY]"	"N-Term(TMT6plex)"	"1"	"2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"Q641X1; P50123"	"Ankyrin repeat domain-containing protein 61 OS=Rattus norvegicus OX=10116 GN=Ankrd61 PE=2 SV=1; Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"508.81839"	"1016.62950"	"1016.63016"	"-0.65"	"-0.00033"	"6/52"	"6"	"52"	"1890974.47375488"	"HCD"	"MS2"	"19.64638"	"92.5"	"100.000"	"60.0733"	"19411"	"19411"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.0"	""	"123.5"	""	"124.3"	""	"155.8"	"1.0"	"169.9"	"168.0"	""	"384"	"24"	"32.000"	"25.000"	"0.0740118446718281"	""	"0.009751"	"0.1295"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTLLAR"	"[RK].dVTLLAR.[LY]"	"N-Term(TMT6plex)"	"1"	"2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"Q641X1; P50123"	"Ankyrin repeat domain-containing protein 61 OS=Rattus norvegicus OX=10116 GN=Ankrd61 PE=2 SV=1; Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"508.81842"	"1016.62956"	"1016.63016"	"-0.59"	"-0.00030"	"5/52"	"5"	"52"	"3340219.97900391"	"HCD"	"MS2"	"17.37327"	"151.6"	"100.000"	"60.3616"	"19528"	"19528"	"19512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.0"	""	"167.5"	""	"178.6"	""	"284.3"	"0.1"	"300.4"	"329.7"	""	"384"	"35"	"32.000"	"25.000"	"0.00589252221771102"	""	"0.001261"	"0.009938"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEAISR"	"[R].lVEAISR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"508.81842"	"1016.62956"	"1016.63016"	"-0.59"	"-0.00030"	"5/54"	"5"	"54"	"6803911.09729004"	"HCD"	"MS2"	"1.244093"	"298.2"	"100.000"	"54.1163"	"16994"	"16994"	"16977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.4"	""	"386.2"	""	"437.7"	""	"488.9"	"1.9"	"560.2"	"572.8"	""	"384"	"27"	"32.000"	"25.000"	"0.0347777297782963"	""	"0.00329"	"0.03554"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTLLAR"	"[RK].dVTLLAR.[LY]"	"N-Term(TMT6plex)"	"1"	"2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"Q641X1; P50123"	"Ankyrin repeat domain-containing protein 61 OS=Rattus norvegicus OX=10116 GN=Ankrd61 PE=2 SV=1; Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"508.81845"	"1016.62963"	"1016.63016"	"-0.53"	"-0.00027"	"6/52"	"6"	"52"	"2073237.98944092"	"HCD"	"MS2"	"21.28354"	"96.8"	"100.000"	"59.9674"	"19401"	"19401"	"19382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.9"	""	"121.4"	""	"113.0"	""	"175.0"	""	"185.9"	"191.6"	""	"384"	"24"	"32.000"	"25.000"	"0.0760853825770444"	""	"0.005673"	"0.07083"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTLLAR"	"[RK].dVTLLAR.[LY]"	"N-Term(TMT6plex)"	"1"	"2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"Q641X1; P50123"	"Ankyrin repeat domain-containing protein 61 OS=Rattus norvegicus OX=10116 GN=Ankrd61 PE=2 SV=1; Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"508.81854"	"1016.62981"	"1016.63016"	"-0.35"	"-0.00018"	"5/52"	"5"	"52"	"2978615.49108887"	"HCD"	"MS2"	"17.02448"	"142.7"	"100.000"	"60.2758"	"19527"	"19527"	"19509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.7"	""	"176.3"	""	"169.5"	""	"253.4"	""	"290.1"	"298.6"	""	"384"	"38"	"32.000"	"25.000"	"0.00283988810528296"	""	"0.0001991"	"0.003981"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IESLGLR"	"[K].iESLGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"508.81863"	"1016.62999"	"1016.63016"	"-0.17"	"-0.00008"	"5/50"	"5"	"50"	"2390641.71203613"	"HCD"	"MS2"	"19.04752"	"104.4"	"100.000"	"72.7213"	"24570"	"24570"	"24552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.2"	""	"138.1"	""	"146.7"	""	"136.6"	""	"194.5"	"188.6"	""	"387"	"32"	"32.000"	"25.000"	"0.0123503984577871"	""	"0.001615"	"0.01437"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQSIGIR"	"[].lqSIGIR.[]"	"N-Term(TMT6plex); Q2(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"508.81863"	"1016.62999"	"1016.63016"	"-0.17"	"-0.00009"	"5/58"	"5"	"58"	"2390641.71203613"	"HCD"	"MS2"	"19.04752"	"104.4"	"100.000"	"72.7213"	"24570"	"24570"	"24552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.2"	""	"138.1"	""	"146.7"	""	"136.6"	""	"194.5"	"188.6"	""	"387"	"32"	"32.000"	"25.000"	"0.0123503984577871"	""	"0.001615"	"0.01437"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IESLGLR"	"[K].iESLGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"508.81866"	"1016.63005"	"1016.63016"	"-0.11"	"-0.00005"	"5/50"	"5"	"50"	"2041647.72546387"	"HCD"	"MS2"	"18.93184"	"90.0"	"100.000"	"72.3081"	"24373"	"24373"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.2"	""	"137.7"	""	"124.3"	""	"124.5"	"0.4"	"155.7"	"154.5"	""	"387"	"23"	"32.000"	"25.000"	"0.0909245100151091"	""	"0.00307"	"0.03361"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQSIGIR"	"[].lqSIGIR.[]"	"N-Term(TMT6plex); Q2(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"508.81866"	"1016.63005"	"1016.63016"	"-0.11"	"-0.00005"	"5/58"	"5"	"58"	"2041647.72546387"	"HCD"	"MS2"	"18.93184"	"90.0"	"100.000"	"72.3081"	"24373"	"24373"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.2"	""	"137.7"	""	"124.3"	""	"124.5"	"0.4"	"155.7"	"154.5"	""	"387"	"23"	"32.000"	"25.000"	"0.0909245100151091"	""	"0.00307"	"0.03361"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LTDIGIR"	"[K].lTDIGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	""	"0.0435"	"3"	"3"	"3"	"508.81866"	"1016.63005"	"1016.63016"	"-0.11"	"-0.00005"	"6/50"	"6"	"50"	"2041647.72546387"	"HCD"	"MS2"	"18.93184"	"90.0"	"100.000"	"72.3081"	"24373"	"24373"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.2"	""	"137.7"	""	"124.3"	""	"124.5"	"0.4"	"155.7"	"154.5"	""	"387"	"22"	"32.000"	"25.000"	"0.129027109842836"	""	"0.002286"	"0.0218"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESVLLR"	"[R].aESVLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54747"	"DNA polymerase delta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Pold1 PE=2 SV=1"	"O54747"	"DNA polymerase delta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Pold1 PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"508.81873"	"1016.63017"	"1016.63016"	"0.01"	"0.00001"	"6/50"	"6"	"50"	"1416403.41693115"	"HCD"	"MS2"	"39.19913"	"74.5"	"100.000"	"51.1084"	"15772"	"15772"	"15747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.7"	""	"89.3"	""	"93.0"	""	"132.0"	"3.3"	"115.5"	"174.0"	""	"359"	"13"	"32.000"	"25.000"	"0.869089399813458"	"20"	"0.009348"	"0.1215"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IESLGLR"	"[K].iESLGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"Q5FVN8"	"WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdsub1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"508.81885"	"1016.63042"	"1016.63016"	"0.25"	"0.00013"	"5/50"	"5"	"50"	"1869297.18157959"	"HCD"	"MS2"	"16.75189"	"85.4"	"100.000"	"72.4020"	"24441"	"24441"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.0"	""	"114.3"	""	"130.4"	""	"117.6"	"1.2"	"152.6"	"150.8"	""	"359"	"32"	"32.000"	"25.000"	"0.0115894934111721"	""	"0.001872"	"0.01579"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQSIGIR"	"[].lqSIGIR.[]"	"N-Term(TMT6plex); Q2(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"508.81885"	"1016.63042"	"1016.63016"	"0.25"	"0.00013"	"5/58"	"5"	"58"	"1869297.18157959"	"HCD"	"MS2"	"16.75189"	"85.4"	"100.000"	"72.4020"	"24441"	"24441"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.0"	""	"114.3"	""	"130.4"	""	"117.6"	"1.2"	"152.6"	"150.8"	""	"359"	"32"	"32.000"	"25.000"	"0.0115894934111721"	""	"0.001872"	"0.01579"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"509.29721"	"1017.58714"	"1017.58902"	"-1.85"	"-0.00094"	"5/64"	"5"	"64"	"20356061.0288086"	"HCD"	"MS2"	"7.734503"	"455.3"	"49.608"	"39.0747"	"10890"	"10890"	"10873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"647.2"	""	"673.7"	""	"492.6"	""	"836.4"	"1.2"	"870.3"	"793.7"	""	"460"	"37"	"33.000"	"26.000"	"0.00461028566293988"	""	"0.0001991"	"0.002433"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"509.29749"	"1017.58769"	"1017.58902"	"-1.31"	"-0.00067"	"5/64"	"5"	"64"	"13964540.7805176"	"HCD"	"MS2"	"19.77059"	"671.3"	"100.000"	"38.9279"	"10865"	"10865"	"10845"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"911.1"	""	"947.8"	""	"736.0"	""	"1251.9"	"4.6"	"1340.2"	"1174.4"	""	"470"	"37"	"33.000"	"26.000"	"0.00520077256757325"	""	"0.0001991"	"0.003161"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"509.29755"	"1017.58782"	"1017.58902"	"-1.19"	"-0.00060"	"6/64"	"6"	"64"	"3848479.85327148"	"HCD"	"MS2"	"46.00034"	"252.4"	"100.000"	"39.3762"	"11010"	"11010"	"10997"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.0"	""	"332.8"	""	"276.9"	""	"434.4"	""	"476.5"	"512.6"	""	"470"	"18"	"33.000"	"26.000"	"0.345197675246309"	"16"	"0.000264"	"0.006016"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAQDVR"	"[K].vTAQDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"509.29770"	"1017.58812"	"1017.58902"	"-0.89"	"-0.00045"	"5/60"	"5"	"60"	"10387489.644043"	"HCD"	"MS2"	"6.101363"	"532.0"	"100.000"	"27.1662"	"6118"	"6118"	"6103"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"766.8"	""	"498.1"	""	"555.1"	""	"956.2"	"55.9"	"1093.9"	"1126.9"	""	"470"	"28"	"33.000"	"26.000"	"0.0405571904617698"	""	"0.002588"	"0.02643"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAQDVR"	"[K].vTAQDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"509.29773"	"1017.58818"	"1017.58902"	"-0.83"	"-0.00042"	"5/60"	"5"	"60"	"10074355.1472168"	"HCD"	"MS2"	"0"	"498.2"	"100.000"	"27.3827"	"6167"	"6167"	"6148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"714.1"	""	"483.6"	""	"538.9"	""	"878.3"	"47.3"	"1028.3"	"1041.6"	""	"470"	"26"	"33.000"	"26.000"	"0.054584314714392"	""	"0.003317"	"0.03672"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLADGR"	"[K].gSLLADGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"509.29779"	"1017.58830"	"1017.58902"	"-0.71"	"-0.00036"	"6/64"	"6"	"64"	"5628070.19293213"	"HCD"	"MS2"	"9.620107"	"320.9"	"100.000"	"39.2143"	"10981"	"10981"	"10971"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"443.2"	""	"425.8"	""	"352.3"	""	"550.1"	""	"641.7"	"632.2"	""	"464"	"25"	"33.000"	"26.000"	"0.0675286371391453"	"20"	"0.0001991"	"0.005331"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGDLGAR"	"[R].sIGDLGAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"509.29874"	"1017.59020"	"1017.58902"	"1.15"	"0.00059"	"7/62"	"7"	"62"	"9979693.94812012"	"HCD"	"MS2"	"14.70504"	"453.1"	"100.000"	"43.8958"	"12878"	"12878"	"12858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"614.8"	""	"657.6"	""	"670.6"	""	"618.5"	""	"839.7"	"901.7"	""	"420"	"22"	"33.000"	"26.000"	"0.146628804856206"	"20"	"0.0007633"	"0.007273"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"509.78424"	"1018.56120"	"1018.56181"	"-0.59"	"-0.00030"	"6/54"	"6"	"54"	"1844268.019104"	"HCD"	"MS2"	"18.80083"	"86.6"	"100.000"	"63.0805"	"20631"	"20631"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	""	"77.0"	""	"92.9"	""	"174.7"	"3.8"	"204.0"	"193.5"	""	"590"	"49"	"34.000"	"27.000"	"0.000414784019618324"	"16"	"0.005426"	"0.06878"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"509.78952"	"1018.57176"	"1018.57304"	"-1.25"	"-0.00064"	"9/54"	"9"	"54"	"26351483.3057861"	"HCD"	"MS2"	"12.99298"	"501.5"	"41.237"	"36.1357"	"9733"	"9733"	"9719"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"822.6"	""	"628.6"	""	"718.7"	""	"883.2"	"10.4"	"859.6"	"820.9"	""	"614"	"32"	"34.000"	"27.000"	"0.0173835461734744"	""	"0.002525"	"0.02491"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEALR"	"[R].sVDEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.2188"	"0.0000"	"1"	"1"	"1"	"509.78983"	"1018.57237"	"1018.57304"	"-0.65"	"-0.00033"	"9/54"	"9"	"54"	"18906582.977478"	"HCD"	"MS2"	"23.02646"	"723.0"	"77.287"	"36.2065"	"9724"	"9724"	"9714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1173.5"	""	"890.4"	""	"1031.9"	""	"1259.3"	"35.8"	"1203.2"	"1246.4"	""	"601"	"32"	"34.000"	"27.000"	"0.0187864394179094"	""	"0.002035"	"0.01807"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMAITPR"	"[R].tMAITPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"509.79916"	"1018.59105"	"1018.59167"	"-0.60"	"-0.00031"	"5/56"	"5"	"56"	"5756852.85546875"	"HCD"	"MS2"	"30.4922"	"333.2"	"100.000"	"38.7854"	"10807"	"10807"	"10786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"451.9"	""	"415.8"	""	"421.9"	""	"502.5"	""	"717.7"	"658.5"	""	"618"	"20"	"34.000"	"27.000"	"0.336479398840031"	"19"	"0.004852"	"0.05988"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMAITPR"	"[R].tMAITPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"509.79932"	"1018.59136"	"1018.59167"	"-0.31"	"-0.00016"	"5/56"	"5"	"56"	"5547045.75201416"	"HCD"	"MS2"	"26.33475"	"315.8"	"100.000"	"38.8615"	"10802"	"10802"	"10781"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"420.0"	""	"418.8"	""	"413.4"	""	"493.4"	""	"635.1"	"618.3"	""	"618"	"25"	"34.000"	"27.000"	"0.0959308912731663"	"20"	"0.002628"	"0.02743"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENSITI"	"[R].iENSITI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"509.80200"	"1018.59673"	"1018.59819"	"-1.44"	"-0.00073"	"6/56"	"6"	"56"	"611562.026245117"	"HCD"	"MS2"	"15.03164"	"17.0"	"100.000"	"101.4615"	"36157"	"36157"	"36135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.5"	""	"20.4"	""	"27.5"	""	"22.4"	"1.1"	"30.1"	"37.1"	""	"545"	"30"	"34.000"	"27.000"	"0.0244549346501454"	"24"	"0.001951"	"0.01673"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENSITI"	"[R].iENSITI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"F1LQ70"	"Arachidonate 12-lipoxygenase, 12S-type OS=Rattus norvegicus OX=10116 GN=Alox12 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"509.80234"	"1018.59740"	"1018.59819"	"-0.78"	"-0.00040"	"6/56"	"6"	"56"	"644712.522827148"	"HCD"	"MS2"	"7.81274"	"15.7"	"100.000"	"101.6140"	"36244"	"36244"	"36224"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.3"	""	"21.8"	""	"22.9"	""	"25.7"	""	"29.3"	"31.5"	""	"545"	"35"	"34.000"	"27.000"	"0.00796831522962308"	""	"0.001596"	"0.01293"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAAVQR"	"[K].dMAAVQR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P37805; P31232"	"Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2; Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"510.27835"	"1019.54943"	"1019.55053"	"-1.08"	"-0.00055"	"5/50"	"5"	"50"	"7034794.26348877"	"HCD"	"MS2"	"20.95358"	"417.3"	"100.000"	"28.7434"	"6712"	"6712"	"6697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"743.0"	""	"594.8"	""	"620.6"	""	"467.2"	""	"748.1"	"779.8"	""	"532"	"24"	"34.000"	"27.000"	"0.10020321052972"	"23"	"0.003317"	"0.03589"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAAVQR"	"[K].dMAAVQR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P37805; P31232"	"Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2; Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"510.27835"	"1019.54943"	"1019.55053"	"-1.08"	"-0.00055"	"5/50"	"5"	"50"	"6932703.80767822"	"HCD"	"MS2"	"30.37355"	"416.4"	"100.000"	"28.5061"	"6659"	"6659"	"6647"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"733.5"	""	"633.3"	""	"642.1"	""	"464.1"	""	"710.9"	"761.0"	""	"532"	"23"	"34.000"	"27.000"	"0.142521910898549"	"22"	"0.004234"	"0.04942"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSQLER"	"[K].tGSQLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"510.28726"	"1019.56725"	"1019.56829"	"-1.02"	"-0.00052"	"6/64"	"6"	"64"	"1302838.02099609"	"HCD"	"MS2"	"31.83406"	"99.4"	"100.000"	"21.6448"	"3974"	"3974"	"3958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.0"	""	"105.1"	""	"102.2"	""	"220.0"	""	"201.5"	"211.7"	""	"525"	"28"	"34.000"	"27.000"	"0.0409382531992075"	"23"	"0.00329"	"0.03566"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSQLER"	"[K].tGSQLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"510.28741"	"1019.56755"	"1019.56829"	"-0.72"	"-0.00037"	"6/64"	"6"	"64"	"1023248.32769775"	"HCD"	"MS2"	"14.51393"	"77.8"	"100.000"	"21.7059"	"3957"	"3957"	"3939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.6"	""	"76.7"	""	"72.0"	""	"189.4"	""	"154.3"	"163.8"	""	"522"	"24"	"34.000"	"27.000"	"0.102480328139296"	"23"	"0.001951"	"0.01702"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVNMLR"	"[K].aSVNMLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"510.29678"	"1019.58629"	"1019.58692"	"-0.61"	"-0.00031"	"5/54"	"5"	"54"	"6852152.92596436"	"HCD"	"MS2"	"34.60077"	"392.9"	"100.000"	"43.8787"	"12836"	"12836"	"12825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"582.8"	""	"539.4"	""	"598.6"	""	"525.7"	""	"747.9"	"735.8"	""	"565"	"16"	"34.000"	"27.000"	"0.744763616495671"	"16"	"0.006033"	"0.07404"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASVNMLR"	"[K].aSVNMLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"510.29684"	"1019.58641"	"1019.58692"	"-0.49"	"-0.00025"	"6/54"	"6"	"54"	"6685469.17468262"	"HCD"	"MS2"	"30.3922"	"370.6"	"100.000"	"43.7391"	"12814"	"12814"	"12794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"542.3"	""	"509.0"	""	"591.5"	""	"484.0"	""	"678.1"	"709.1"	""	"565"	"20"	"34.000"	"27.000"	"0.304101422850429"	"18"	"0.004751"	"0.05576"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLSDR"	"[K].lTSLSDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"510.79742"	"1020.58757"	"1020.58869"	"-1.10"	"-0.00056"	"6/56"	"6"	"56"	"13055007.538269"	"HCD"	"MS2"	"4.657724"	"536.4"	"73.933"	"43.2906"	"12596"	"12596"	"12578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"979.5"	""	"843.0"	""	"624.8"	""	"881.7"	"14.5"	"896.7"	"831.3"	""	"492"	"34"	"33.000"	"26.000"	"0.00979343639561604"	""	"0.002711"	"0.02897"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSLSDR"	"[K].lTSLSDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"510.79752"	"1020.58776"	"1020.58869"	"-0.92"	"-0.00047"	"6/56"	"6"	"56"	"12602183.6500244"	"HCD"	"MS2"	"8.978413"	"649.4"	"89.103"	"43.1068"	"12556"	"12556"	"12539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1199.1"	""	"1005.5"	""	"775.8"	""	"1077.7"	"30.9"	"1042.3"	"1005.6"	""	"492"	"32"	"33.000"	"26.000"	"0.015098545327054"	"25"	"0.00296"	"0.03152"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEAFAR"	"[R].vVEAFAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"510.80493"	"1020.60259"	"1020.60395"	"-1.33"	"-0.00068"	"10/48"	"10"	"48"	"9168654.65112305"	"HCD"	"MS2"	"1.428847"	"406.8"	"100.000"	"54.9046"	"17349"	"17349"	"17332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.7"	""	"363.6"	""	"326.9"	""	"747.6"	""	"1012.3"	"1165.4"	""	"336"	"28"	"32.000"	"25.000"	"0.0278169353862881"	"21"	"0.002189"	"0.02122"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEAFAR"	"[R].vVEAFAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"510.80508"	"1020.60289"	"1020.60395"	"-1.03"	"-0.00053"	"5/48"	"5"	"48"	"12317891.5391235"	"HCD"	"MS2"	"5.013665"	"508.9"	"100.000"	"55.0888"	"17390"	"17390"	"17374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"383.8"	""	"483.5"	""	"413.5"	""	"905.0"	""	"1273.9"	"1410.9"	""	"336"	"29"	"32.000"	"25.000"	"0.0208597587675525"	"22"	"0.003317"	"0.03724"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEAFAR"	"[R].vVEAFAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"510.80524"	"1020.60320"	"1020.60395"	"-0.73"	"-0.00037"	"5/48"	"5"	"48"	"3266991.84063721"	"HCD"	"MS2"	"9.213202"	"155.4"	"100.000"	"55.3942"	"17514"	"17514"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.4"	""	"161.8"	""	"134.9"	""	"264.9"	""	"384.4"	"422.4"	""	"336"	"27"	"32.000"	"25.000"	"0.0368391229138875"	"21"	"0.001615"	"0.01424"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEAFAR"	"[R].vVEAFAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"510.80539"	"1020.60350"	"1020.60395"	"-0.44"	"-0.00022"	"5/48"	"5"	"48"	"7204793.29138184"	"HCD"	"MS2"	"25.60877"	"329.3"	"100.000"	"54.6037"	"17226"	"17226"	"17204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"273.8"	""	"328.3"	""	"282.0"	""	"584.7"	""	"806.5"	"869.8"	""	"336"	"29"	"32.000"	"25.000"	"0.0225065683487557"	"22"	"0.00167"	"0.01492"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEAFAR"	"[R].vVEAFAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"510.80551"	"1020.60375"	"1020.60395"	"-0.20"	"-0.00010"	"5/48"	"5"	"48"	"2278339.54418945"	"HCD"	"MS2"	"20.00273"	"119.6"	"100.000"	"54.8107"	"17276"	"17276"	"17257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.0"	""	"122.9"	""	"123.8"	""	"211.0"	""	"279.1"	"290.1"	""	"336"	"28"	"32.000"	"25.000"	"0.0248490209212259"	"25"	"0.001596"	"0.01294"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFLIR"	"[R].dGAFLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"510.80560"	"1020.60393"	"1020.60395"	"-0.02"	"-0.00001"	"6/48"	"6"	"48"	"881776.507324219"	"HCD"	"MS2"	"15.87925"	"45.7"	"100.000"	"67.5843"	"22489"	"22489"	"22470"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.5"	""	"53.8"	""	"52.9"	""	"78.9"	"1.2"	"86.9"	"81.2"	""	"336"	"21"	"32.000"	"25.000"	"0.119209065017849"	""	"0.006577"	"0.08199"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFLIR"	"[R].dGAFLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"510.80563"	"1020.60399"	"1020.60395"	"0.04"	"0.00002"	"6/48"	"6"	"48"	"658857.396484375"	"HCD"	"MS2"	"38.66205"	"36.9"	"100.000"	"67.8977"	"22616"	"22616"	"22595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.0"	""	"47.6"	""	"53.5"	""	"60.7"	""	"70.5"	"61.5"	""	"336"	"10"	"32.000"	"25.000"	"1.82519504767667"	"19"	"0.001453"	"0.01193"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAFLIR"	"[R].dGAFLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"510.80621"	"1020.60515"	"1020.60395"	"1.18"	"0.00060"	"6/48"	"6"	"48"	"859705.236633301"	"HCD"	"MS2"	"21.68843"	"44.0"	"100.000"	"67.5624"	"22449"	"22449"	"22427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.3"	""	"61.2"	""	"58.5"	""	"71.2"	""	"80.7"	"84.5"	""	"323"	"23"	"32.000"	"25.000"	"0.0871309655361931"	"22"	"0.00307"	"0.03291"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPDGNR"	"[R].fSPDGNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"511.26602"	"1021.52477"	"1021.52642"	"-1.62"	"-0.00083"	"4/54"	"4"	"54"	"4205029.07086182"	"HCD"	"MS2"	"14.2394"	"263.4"	"100.000"	"29.9874"	"7217"	"7217"	"7203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"404.8"	""	"332.8"	""	"361.3"	""	"424.6"	""	"484.9"	"487.5"	""	"398"	"19"	"32.000"	"25.000"	"0.258733746028625"	"16"	"0.003984"	"0.04371"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPDGNR"	"[R].fSPDGNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"511.26657"	"1021.52587"	"1021.52642"	"-0.55"	"-0.00028"	"4/54"	"4"	"54"	"3857426.67047119"	"HCD"	"MS2"	"12.21303"	"243.3"	"100.000"	"29.8534"	"7204"	"7204"	"7187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"374.6"	""	"314.0"	""	"326.3"	""	"383.9"	""	"452.3"	"454.4"	""	"399"	"16"	"32.000"	"26.000"	"0.469832332137254"	"15"	"0.004357"	"0.05114"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSNSLTR"	"[K].dSNSLTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"511.27643"	"1021.54558"	"1021.54755"	"-1.93"	"-0.00099"	"5/66"	"5"	"66"	"463086.425842285"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"21.9643"	"4092"	"4092"	"4084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.2"	""	"48.7"	""	"48.6"	""	"97.2"	""	"96.8"	"82.8"	""	"416"	"27"	"33.000"	"26.000"	"0.0404634896977514"	"22"	"0.0005161"	"0.006999"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSNSLTR"	"[K].dSNSLTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"511.27682"	"1021.54637"	"1021.54755"	"-1.16"	"-0.00059"	"5/66"	"5"	"66"	"474624.837341309"	"HCD"	"MS2"	"9.575909"	"44.8"	"100.000"	"22.1405"	"4118"	"4118"	"4109"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"56.8"	""	"48.9"	""	"89.9"	""	"86.6"	"90.1"	""	"440"	"29"	"33.000"	"26.000"	"0.025375971672064"	"23"	"0.002525"	"0.02453"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVDAFR"	"[R].nAVDAFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"511.28510"	"1021.56291"	"1021.56281"	"0.10"	"0.00005"	"9/60"	"9"	"60"	"7543990.5881958"	"HCD"	"MS2"	"20.58404"	"376.8"	"100.000"	"41.0865"	"11703"	"11703"	"11684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"505.3"	""	"458.2"	""	"469.8"	""	"645.8"	"1.5"	"734.9"	"758.9"	""	"371"	"36"	"32.000"	"25.000"	"0.00434854445241846"	"17"	"0.001453"	"0.01169"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSVSSTR"	"[R].gVSVSSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"511.29532"	"1021.58336"	"1021.58394"	"-0.57"	"-0.00029"	"6/64"	"6"	"64"	"2580281.30957031"	"HCD"	"MS2"	"69.95371"	"170.0"	"100.000"	"24.2313"	"4960"	"4960"	"4930"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.1"	""	"198.0"	""	"212.7"	""	"342.1"	""	"344.6"	"309.3"	""	"321"	"5"	"32.000"	"25.000"	"4.79153910336333"	"17"	"0.007069"	"0.09024"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSVSSTR"	"[R].gVSVSSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"511.29538"	"1021.58348"	"1021.58394"	"-0.45"	"-0.00023"	"6/64"	"6"	"64"	"1848725.50994873"	"HCD"	"MS2"	"51.26841"	"128.9"	"100.000"	"24.3237"	"4960"	"4960"	"4935"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.0"	""	"174.2"	""	"173.4"	""	"252.4"	""	"254.0"	"238.4"	""	"321"	"12"	"32.000"	"25.000"	"0.910909091680719"	"18"	"0.005426"	"0.06895"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISASSATR"	"[R].iSASSATR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.29556"	"1021.58385"	"1021.58394"	"-0.09"	"-0.00005"	"6/66"	"6"	"66"	"5624768.23187256"	"HCD"	"MS2"	"27.74777"	"348.3"	"100.000"	"24.5479"	"5089"	"5089"	"5066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"385.2"	""	"397.9"	""	"396.1"	""	"646.5"	""	"748.5"	"746.2"	""	"338"	"31"	"32.000"	"25.000"	"0.0128199610179932"	"14"	"0.0001991"	"0.004325"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISASSATR"	"[R].iSASSATR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"Q66H76"	"Paxillin OS=Rattus norvegicus OX=10116 GN=Pxn PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"511.29587"	"1021.58446"	"1021.58394"	"0.51"	"0.00026"	"6/66"	"6"	"66"	"4980139.4473877"	"HCD"	"MS2"	"19.18737"	"306.2"	"100.000"	"24.6629"	"5098"	"5098"	"5082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.6"	""	"352.4"	""	"352.0"	""	"572.4"	""	"618.1"	"668.0"	""	"338"	"32"	"32.000"	"25.000"	"0.00952547638345862"	"17"	"0.0001686"	"0.001542"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"511.30481"	"1021.60234"	"1021.60423"	"-1.85"	"-0.00094"	"6/50"	"6"	"50"	"1263373.7064209"	"HCD"	"MS2"	"0"	"138.0"	"100.000"	"19.4188"	"3098"	"3098"	"3089"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.4"	""	"228.0"	""	"215.2"	""	"212.4"	""	"215.9"	"216.2"	""	"219"	"35"	"30.000"	"23.000"	"0.00355151880997537"	""	"0.0001991"	"0.005671"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"511.30518"	"1021.60307"	"1021.60423"	"-1.13"	"-0.00058"	"6/50"	"6"	"50"	"779308.815368652"	"HCD"	"MS2"	"0"	"90.3"	"100.000"	"19.4130"	"3060"	"3060"	"3048"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.9"	""	"133.4"	""	"124.3"	""	"144.8"	""	"160.8"	"168.1"	""	"216"	"36"	"30.000"	"23.000"	"0.00284723789669141"	""	"0.0001991"	"0.003307"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSSGAK"	"[R].gGSSGAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"511.30591"	"1021.60454"	"1021.60423"	"0.30"	"0.00016"	"6/50"	"6"	"50"	"676820.381958008"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"19.7001"	"3167"	"3167"	"3160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.9"	""	"126.2"	""	"111.0"	""	"122.8"	""	"136.5"	"126.0"	""	"230"	"23"	"30.000"	"23.000"	"0.0593878824662882"	"21"	"0.0003294"	"0.006212"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPTVFR"	"[R].sSPTVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"511.79453"	"1022.58177"	"1022.58321"	"-1.41"	"-0.00072"	"6/54"	"6"	"54"	"33072901.032959"	"HCD"	"MS2"	"0"	"481.3"	"33.067"	"36.5387"	"9856"	"9856"	"9843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1019.5"	""	"648.5"	""	"515.5"	""	"808.3"	""	"727.6"	"834.1"	""	"315"	"17"	"31.000"	"24.000"	"0.301495308190821"	"18"	"0.006777"	"0.08435"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPTVFR"	"[R].sSPTVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"511.79462"	"1022.58196"	"1022.58321"	"-1.23"	"-0.00063"	"6/54"	"6"	"54"	"17159314.9758301"	"HCD"	"MS2"	"24.2643"	"713.1"	"76.623"	"36.1405"	"9735"	"9735"	"9719"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1344.8"	""	"996.5"	""	"823.8"	""	"1150.4"	""	"1197.4"	"1244.8"	""	"311"	"18"	"31.000"	"24.000"	"0.236445140873403"	"18"	"0.004234"	"0.04959"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGSFLVR"	"[RK].dGSFLVR.[DA]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3; P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"511.79483"	"1022.58238"	"1022.58321"	"-0.81"	"-0.00041"	"6/52"	"6"	"52"	"1732060.08721924"	"HCD"	"MS2"	"0"	"99.0"	"100.000"	"53.2924"	"16691"	"16691"	"16671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.2"	""	"112.3"	""	"127.2"	""	"168.6"	""	"183.2"	"203.1"	""	"311"	"19"	"31.000"	"24.000"	"0.207840602822972"	"18"	"0.004852"	"0.06001"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPTVFR"	"[R].sSPTVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"511.79486"	"1022.58245"	"1022.58321"	"-0.75"	"-0.00038"	"6/54"	"6"	"54"	"34705520.8132324"	"HCD"	"MS2"	"0.3375371"	"483.5"	"30.418"	"36.4223"	"9847"	"9847"	"9836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1056.0"	""	"644.8"	""	"504.5"	""	"790.7"	""	"730.8"	"849.9"	""	"311"	"20"	"31.000"	"24.000"	"0.170895408031757"	"18"	"0.005871"	"0.0725"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPTVFR"	"[R].sSPTVFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"511.79498"	"1022.58269"	"1022.58321"	"-0.51"	"-0.00026"	"6/54"	"6"	"54"	"19242972.3398438"	"HCD"	"MS2"	"16.6467"	"852.4"	"80.395"	"36.2616"	"9747"	"9747"	"9735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1619.8"	""	"1198.7"	""	"966.0"	""	"1383.2"	""	"1416.9"	"1487.2"	""	"311"	"18"	"31.000"	"24.000"	"0.234817463972525"	"19"	"0.004314"	"0.05101"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGSFLVR"	"[RK].dGSFLVR.[DA]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3; P97573"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1; Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Inpp5d PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"511.79507"	"1022.58287"	"1022.58321"	"-0.33"	"-0.00017"	"6/52"	"6"	"52"	"1767730.98638916"	"HCD"	"MS2"	"14.61219"	"98.9"	"100.000"	"53.5985"	"16782"	"16782"	"16761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.3"	""	"120.8"	""	"126.0"	""	"174.1"	"0.2"	"181.7"	"193.0"	""	"312"	"19"	"31.000"	"24.000"	"0.179938708220091"	"20"	"0.005507"	"0.06972"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIVGSDR"	"[R].fIVGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2R7"	"LRP chaperone MESD OS=Rattus norvegicus OX=10116 GN=Mesd PE=2 SV=1"	"Q5U2R7"	"LRP chaperone MESD OS=Rattus norvegicus OX=10116 GN=Mesd PE=2 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"511.79517"	"1022.58306"	"1022.58321"	"-0.15"	"-0.00008"	"9/50"	"9"	"50"	"2255539.43591309"	"HCD"	"MS2"	"19.12981"	"118.0"	"100.000"	"50.4771"	"15549"	"15549"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.8"	""	"137.8"	""	"169.0"	""	"227.1"	"0.1"	"194.8"	"228.5"	""	"314"	"32"	"31.000"	"24.000"	"0.00950385173363644"	""	"0.002559"	"0.02559"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIVGSDR"	"[R].fIVGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2R7"	"LRP chaperone MESD OS=Rattus norvegicus OX=10116 GN=Mesd PE=2 SV=1"	"Q5U2R7"	"LRP chaperone MESD OS=Rattus norvegicus OX=10116 GN=Mesd PE=2 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"511.79538"	"1022.58348"	"1022.58321"	"0.27"	"0.00014"	"10/50"	"10"	"50"	"2146090.86212158"	"HCD"	"MS2"	"6.953679"	"122.8"	"100.000"	"50.9108"	"15691"	"15691"	"15669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.9"	""	"154.8"	""	"182.3"	""	"221.9"	""	"213.0"	"243.8"	""	"264"	"36"	"31.000"	"24.000"	"0.00352836845943558"	""	"0.00394"	"0.04348"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMSTVIR"	"[K].sMSTVIR.[KM]"	"N-Term(TMT6plex)"	"1"	"2"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542; Q64568"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"511.79626"	"1022.58525"	"1022.58658"	"-1.30"	"-0.00066"	"6/54"	"6"	"54"	"4378736.48187256"	"HCD"	"MS2"	"29.86267"	"237.0"	"100.000"	"39.3768"	"11046"	"11046"	"11029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.1"	""	"306.0"	""	"315.8"	""	"313.6"	""	"499.5"	"494.9"	""	"280"	"16"	"31.000"	"24.000"	"0.361516426688843"	"20"	"0.003529"	"0.03863"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTHPIR"	"[R].gLTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"511.81818"	"1022.62908"	"1022.63083"	"-1.72"	"-0.00088"	"9/48"	"9"	"48"	"7481854.89520264"	"HCD"	"MS2"	"30.41538"	"340.6"	"100.000"	"24.1358"	"4883"	"4883"	"4855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"488.6"	""	"484.6"	""	"476.3"	""	"540.0"	""	"663.5"	"576.8"	""	"109"	"25"	"27.000"	"20.000"	"0.0167261698367318"	"16"	"0.002189"	"0.02101"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTHPIR"	"[R].gLTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.81876"	"1022.63024"	"1022.63083"	"-0.58"	"-0.00030"	"9/48"	"9"	"48"	"5602922.58447266"	"HCD"	"MS2"	"3.662268"	"276.7"	"100.000"	"24.1053"	"4908"	"4908"	"4882"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"409.4"	""	"375.0"	""	"384.5"	""	"450.3"	""	"526.2"	"476.8"	""	"109"	"26"	"27.000"	"20.000"	"0.0135330754238609"	"14"	"0.002286"	"0.02149"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFQVTR"	"[R].gSFQVTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"512.29169"	"1023.57610"	"1023.57846"	"-2.31"	"-0.00118"	"6/62"	"6"	"62"	"11339209.609375"	"HCD"	"MS2"	"1.661528"	"524.5"	"100.000"	"34.7525"	"9137"	"9137"	"9124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"739.2"	""	"785.6"	""	"721.6"	""	"829.9"	""	"914.2"	"984.8"	""	"244"	"28"	"30.000"	"23.000"	"0.0195595937664185"	"21"	"0.007912"	"0.1006"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFQVTR"	"[R].gSFQVTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"512.29224"	"1023.57720"	"1023.57846"	"-1.23"	"-0.00063"	"6/62"	"6"	"62"	"11182510.9846191"	"HCD"	"MS2"	"2.306739"	"560.8"	"100.000"	"34.6331"	"9125"	"9125"	"9104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"782.9"	""	"806.8"	""	"773.3"	""	"919.5"	""	"970.5"	"1064.3"	""	"241"	"30"	"30.000"	"23.000"	"0.012822923369603"	"21"	"0.003818"	"0.04178"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSGSGNR"	"[R].aFSGSGNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES53"	"Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus norvegicus OX=10116 GN=Ufd1 PE=1 SV=1"	"Q9ES53"	"Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Rattus norvegicus OX=10116 GN=Ufd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"512.77167"	"1024.53606"	"1024.53732"	"-1.23"	"-0.00063"	"6/62"	"6"	"62"	"384533.512084961"	"HCD"	"MS2"	"33.97208"	"42.7"	"100.000"	"22.5793"	"4320"	"4320"	"4307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.5"	""	"56.5"	""	"60.3"	""	"66.8"	""	"79.9"	"74.3"	""	"345"	"22"	"32.000"	"25.000"	"0.121279975179961"	"14"	"0.0001991"	"0.004889"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYVTSGR"	"[K].lYVTSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"512.80261"	"1024.59795"	"1024.59886"	"-0.89"	"-0.00046"	"5/50"	"5"	"50"	"6820344.90063477"	"HCD"	"MS2"	"25.2468"	"381.5"	"100.000"	"40.5685"	"11527"	"11527"	"11509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"622.7"	""	"625.5"	""	"472.5"	""	"596.3"	""	"656.2"	"643.4"	""	"237"	"25"	"30.000"	"23.000"	"0.0418522056203469"	"18"	"0.002525"	"0.02401"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYVTSGR"	"[K].lYVTSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"512.80286"	"1024.59844"	"1024.59886"	"-0.41"	"-0.00021"	"5/50"	"5"	"50"	"6391741.87286377"	"HCD"	"MS2"	"19.37547"	"348.7"	"100.000"	"40.6826"	"11538"	"11538"	"11518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"552.0"	""	"566.1"	""	"426.4"	""	"576.8"	""	"605.6"	"575.1"	""	"237"	"24"	"30.000"	"23.000"	"0.0462081254211704"	"18"	"0.002559"	"0.02604"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSYLIR"	"[K].sGSYLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"P50904"	"Ras GTPase-activating protein 1 OS=Rattus norvegicus OX=10116 GN=Rasa1 PE=3 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"512.80292"	"1024.59856"	"1024.59886"	"-0.30"	"-0.00015"	"6/52"	"6"	"52"	"2401286.03643799"	"HCD"	"MS2"	"7.420463"	"151.0"	"100.000"	"42.1960"	"12150"	"12150"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.5"	""	"221.5"	""	"199.6"	""	"245.2"	""	"275.5"	"288.1"	""	"239"	"9"	"30.000"	"23.000"	"1.39755177226875"	"15"	"0.009411"	"0.1242"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQAPPVR"	"[K].qQAPPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"512.80786"	"1024.60845"	"1024.61009"	"-1.61"	"-0.00082"	"5/62"	"5"	"62"	"374011.294067383"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"21.6921"	"3952"	"3952"	"3923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.8"	""	"42.2"	""	"34.3"	""	"62.2"	"1.2"	"66.6"	"55.6"	""	"168"	"12"	"29.000"	"22.000"	"0.477836461908827"	"17"	"0.008135"	"0.1031"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQAPPVR"	"[K].qQAPPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"512.80829"	"1024.60930"	"1024.61009"	"-0.77"	"-0.00040"	"4/62"	"4"	"62"	"265297.227661133"	"HCD"	"MS2"	"24.71901"	"25.5"	"100.000"	"21.6838"	"3990"	"3990"	"3968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.2"	""	"27.3"	""	"35.1"	""	"45.2"	""	"57.2"	"46.1"	""	"168"	"11"	"29.000"	"22.000"	"0.618413961895578"	""	"0.008893"	"0.1141"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPIPVDR"	"[R].vPIPVDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"512.82068"	"1024.63408"	"1024.63525"	"-1.14"	"-0.00058"	"5/48"	"5"	"48"	"1154274.77832031"	"HCD"	"MS2"	"22.39344"	"41.3"	"100.000"	"58.3191"	"18697"	"18697"	"18670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.8"	""	"45.4"	""	"61.6"	""	"71.6"	"0.3"	"83.3"	"79.7"	""	"106"	"7"	"27.000"	"20.000"	"1.05992679090535"	"18"	"0.004275"	"0.05045"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"512.82117"	"1024.63506"	"1024.63525"	"-0.18"	"-0.00009"	"7/48"	"7"	"48"	"16474002.0369263"	"HCD"	"MS2"	"0.3650521"	"482.1"	"81.905"	"46.7493"	"14035"	"14035"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"560.0"	""	"635.6"	""	"689.9"	""	"719.2"	""	"915.3"	"1060.6"	""	"106"	"22"	"27.000"	"20.000"	"0.032754869207336"	""	"0.004959"	"0.06307"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.1579"	"0.0000"	"1"	"1"	"1"	"512.82123"	"1024.63518"	"1024.63525"	"-0.07"	"-0.00003"	"8/48"	"8"	"48"	"17237730.7728882"	"HCD"	"MS2"	"0"	"469.8"	"75.866"	"47.0440"	"14117"	"14117"	"14100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"551.9"	""	"607.2"	""	"624.0"	""	"710.5"	""	"921.1"	"1051.0"	""	"106"	"19"	"27.000"	"20.000"	"0.0628457436528594"	""	"0.007752"	"0.09902"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"512.82129"	"1024.63530"	"1024.63525"	"0.05"	"0.00003"	"9/48"	"9"	"48"	"275360666.295898"	"HCD"	"MS2"	"0"	"461.4"	"4.787"	"46.7345"	"13992"	"13992"	"13981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"559.2"	""	"590.8"	""	"609.3"	""	"708.1"	""	"902.7"	"1015.9"	""	"106"	"25"	"27.000"	"20.000"	"0.0151801432405049"	""	"0.006577"	"0.08172"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAPPER"	"[K].iIAPPER.[K]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"512.82159"	"1024.63591"	"1024.63525"	"0.65"	"0.00033"	"7/48"	"7"	"48"	"764360344.412109"	"HCD"	"MS2"	"0"	"722.7"	"2.473"	"46.4488"	"13880"	"13880"	"13867"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"937.0"	""	"982.8"	""	"956.6"	""	"1084.0"	""	"1357.6"	"1544.8"	""	"92"	"22"	"26.000"	"19.000"	"0.0281681180193396"	""	"0.008893"	"0.1132"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGSGFK"	"[-].mLGSGFk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.77789"	"1026.54851"	"1026.54913"	"-0.61"	"-0.00031"	"6/48"	"6"	"48"	"1042136.10290527"	"HCD"	"MS2"	"14.62277"	"48.5"	"100.000"	"74.0707"	"25091"	"25091"	"25065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.4"	""	"61.4"	""	"70.0"	""	"100.4"	"1.0"	"80.9"	"86.8"	""	"252"	"47"	"31.000"	"24.000"	"0.000266913503041311"	"16"	"0.000264"	"0.006097"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGSGFK"	"[-].mLGSGFk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.77802"	"1026.54875"	"1026.54913"	"-0.37"	"-0.00019"	"6/48"	"6"	"48"	"1172360.85198975"	"HCD"	"MS2"	"5.92887"	"56.2"	"100.000"	"74.1756"	"25163"	"25163"	"25142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"76.5"	""	"82.9"	""	"114.7"	""	"93.8"	"100.7"	""	"277"	"45"	"31.000"	"24.000"	"0.000472552182596371"	"15"	"0.0005161"	"0.006613"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVSMAR"	"[K].yAVSMAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"513.78320"	"1026.55913"	"1026.56037"	"-1.21"	"-0.00062"	"5/48"	"5"	"48"	"5104959.58654785"	"HCD"	"MS2"	"44.17742"	"246.8"	"100.000"	"40.0183"	"11269"	"11269"	"11244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"375.3"	""	"374.2"	""	"355.7"	""	"372.0"	"1.5"	"415.1"	"441.3"	""	"262"	"22"	"31.000"	"24.000"	"0.0893863689325588"	"15"	"0.009781"	"0.1308"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVSMAR"	"[K].yAVSMAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"513.78339"	"1026.55950"	"1026.56037"	"-0.85"	"-0.00044"	"5/48"	"5"	"48"	"7129520.99487305"	"HCD"	"MS2"	"3.569867"	"415.5"	"100.000"	"40.2281"	"11388"	"11388"	"11370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"558.0"	""	"595.6"	""	"639.5"	""	"558.6"	""	"771.3"	"820.3"	""	"262"	"29"	"31.000"	"24.000"	"0.0148686416853073"	"18"	"0.00714"	"0.09169"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVSMAR"	"[K].yAVSMAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"513.78357"	"1026.55986"	"1026.56037"	"-0.49"	"-0.00025"	"5/48"	"5"	"48"	"6963662.26916504"	"HCD"	"MS2"	"3.841913"	"389.4"	"100.000"	"40.3193"	"11391"	"11391"	"11373"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"540.1"	""	"545.0"	""	"612.5"	""	"511.0"	""	"710.4"	"775.8"	""	"268"	"30"	"31.000"	"24.000"	"0.0143253353815836"	"17"	"0.006267"	"0.07717"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTTVYR"	"[K].tGTTVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.79224"	"1026.57720"	"1026.57813"	"-0.91"	"-0.00046"	"6/54"	"6"	"54"	"3028159.61309814"	"HCD"	"MS2"	"15.70855"	"194.4"	"100.000"	"25.0432"	"5287"	"5287"	"5271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.5"	""	"229.1"	""	"223.5"	""	"341.6"	""	"385.4"	"400.5"	""	"234"	"13"	"30.000"	"23.000"	"0.61120354112897"	"13"	"0.004158"	"0.04504"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTTVYR"	"[K].tGTTVYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.79242"	"1026.57756"	"1026.57813"	"-0.55"	"-0.00028"	"5/54"	"5"	"54"	"3345023.277771"	"HCD"	"MS2"	"0"	"199.5"	"100.000"	"25.1904"	"5309"	"5309"	"5290"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.7"	""	"249.4"	""	"227.8"	""	"355.3"	""	"389.2"	"408.7"	""	"233"	"17"	"30.000"	"23.000"	"0.249646755030487"	"14"	"0.002755"	"0.0291"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSIYAR"	"[R].tSSIYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"513.79401"	"1026.58074"	"1026.57813"	"2.54"	"0.00131"	"5/52"	"5"	"52"	"2044887.22747803"	"HCD"	"MS2"	"20.34219"	"153.4"	"100.000"	"29.5955"	"7060"	"7060"	"7031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"185.9"	""	"174.7"	""	"161.7"	""	"237.1"	"2.0"	"315.1"	"381.9"	""	"212"	"20"	"30.000"	"23.000"	"0.117302121101633"	"15"	"0.003001"	"0.03216"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSIYAR"	"[R].tSSIYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"513.79639"	"1026.58550"	"1026.57813"	"7.18"	"0.00369"	"6/52"	"6"	"52"	"2211074.23199463"	"HCD"	"MS2"	"36.86658"	"171.8"	"100.000"	"29.3719"	"7009"	"7009"	"6984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.7"	""	"179.2"	""	"175.5"	""	"263.6"	"3.2"	"351.4"	"445.0"	""	"216"	"16"	"30.000"	"23.000"	"0.294729600543268"	"20"	"0.004852"	"0.05912"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPIR"	"[R].qGGLGPIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"513.81598"	"1026.62468"	"1026.62574"	"-1.04"	"-0.00053"	"7/72"	"7"	"72"	"5988349.90032959"	"HCD"	"MS2"	"18.85597"	"327.9"	"100.000"	"38.7421"	"10753"	"10753"	"10734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"316.3"	""	"278.4"	""	"291.0"	""	"656.7"	""	"782.6"	"809.5"	""	"138"	"31"	"28.000"	"21.000"	"0.00533149603716034"	"15"	"9.9E-05"	"0.0008716"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLGPIR"	"[R].qGGLGPIR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.81622"	"1026.62517"	"1026.62574"	"-0.56"	"-0.00029"	"7/72"	"7"	"72"	"5883187.234375"	"HCD"	"MS2"	"20.7412"	"310.2"	"100.000"	"38.6383"	"10747"	"10747"	"10723"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.8"	""	"283.6"	""	"283.0"	""	"626.8"	""	"749.4"	"745.4"	""	"136"	"28"	"28.000"	"21.000"	"0.0106539072767354"	"14"	"0.0001991"	"0.002148"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"514.30798"	"1027.60869"	"1027.60976"	"-1.04"	"-0.00053"	"5/56"	"5"	"56"	"1949291.09625244"	"HCD"	"MS2"	"8.753474"	"97.4"	"100.000"	"48.0965"	"14583"	"14583"	"14561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.9"	""	"133.6"	""	"127.5"	""	"157.0"	"0.8"	"185.2"	"183.7"	""	"216"	"24"	"30.000"	"23.000"	"0.0477995442151637"	""	"0.00212"	"0.01909"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"514.30811"	"1027.60893"	"1027.60976"	"-0.80"	"-0.00041"	"5/56"	"5"	"56"	"41828645.3620605"	"HCD"	"MS2"	"0.09496722"	"568.3"	"37.643"	"47.7958"	"14423"	"14423"	"14406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"792.0"	""	"737.2"	""	"767.6"	""	"926.7"	""	"1061.5"	"1111.1"	""	"216"	"32"	"30.000"	"23.000"	"0.00658299849019383"	"23"	"0.002834"	"0.03"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"514.30817"	"1027.60906"	"1027.60976"	"-0.68"	"-0.00035"	"5/56"	"5"	"56"	"45859870.4697266"	"HCD"	"MS2"	"0.09903888"	"449.4"	"26.050"	"47.4897"	"14336"	"14336"	"14319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"623.7"	""	"625.7"	""	"592.8"	""	"737.5"	""	"826.4"	"860.9"	""	"216"	"32"	"30.000"	"23.000"	"0.00661338423062755"	"23"	"0.004672"	"0.05525"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"514.30817"	"1027.60906"	"1027.60976"	"-0.68"	"-0.00035"	"5/56"	"5"	"56"	"15164666.8324585"	"HCD"	"MS2"	"3.194267"	"372.4"	"62.303"	"48.0883"	"14542"	"14542"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"495.3"	""	"491.8"	""	"515.8"	""	"594.2"	""	"693.8"	"744.9"	""	"216"	"29"	"30.000"	"23.000"	"0.0123146977056606"	"22"	"0.00329"	"0.03558"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"514.30817"	"1027.60906"	"1027.60976"	"-0.68"	"-0.00035"	"5/56"	"5"	"56"	"13516331.6868286"	"HCD"	"MS2"	"4.342762"	"548.6"	"99.544"	"47.7912"	"14459"	"14459"	"14442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"752.5"	""	"733.3"	""	"703.6"	""	"864.1"	""	"1064.7"	"1088.9"	""	"216"	"29"	"30.000"	"23.000"	"0.0122863746868931"	"22"	"0.00296"	"0.03173"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"514.30823"	"1027.60918"	"1027.60976"	"-0.57"	"-0.00029"	"5/56"	"5"	"56"	"7466902.0267334"	"HCD"	"MS2"	"1.135485"	"290.6"	"100.000"	"47.1792"	"14210"	"14210"	"14193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"398.1"	""	"415.0"	""	"401.7"	""	"496.3"	""	"520.4"	"521.1"	""	"212"	"35"	"30.000"	"23.000"	"0.00359174805507554"	"23"	"0.001348"	"0.0105"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"514.30835"	"1027.60942"	"1027.60976"	"-0.33"	"-0.00017"	"5/56"	"5"	"56"	"1735798.27874756"	"HCD"	"MS2"	"0"	"88.4"	"100.000"	"48.4511"	"14690"	"14690"	"14663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.8"	""	"117.3"	""	"124.0"	""	"131.6"	""	"169.0"	"165.9"	""	"213"	"22"	"30.000"	"23.000"	"0.0627118492953702"	""	"0.003786"	"0.04092"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQGLPR"	"[R].dIQGLPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"514.30841"	"1027.60954"	"1027.60976"	"-0.21"	"-0.00011"	"5/56"	"5"	"56"	"10056605.3702393"	"HCD"	"MS2"	"2.684233"	"383.7"	"100.000"	"47.5129"	"14307"	"14307"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"571.4"	""	"528.5"	""	"494.0"	""	"617.2"	""	"730.2"	"701.1"	""	"213"	"32"	"30.000"	"23.000"	"0.00670424084742915"	""	"0.002588"	"0.02669"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSSSAK"	"[-].mFSSSAk.[I]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"P62083"	"40S ribosomal protein S7 OS=Rattus norvegicus OX=10116 GN=Rps7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"514.76837"	"1028.52947"	"1028.52840"	"1.04"	"0.00053"	"6/52"	"6"	"52"	"2307603.59747314"	"HCD"	"MS2"	"33.83532"	"59.8"	"100.000"	"67.3509"	"22363"	"22363"	"22343"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.5"	""	"107.0"	""	"96.6"	""	"69.7"	""	"92.6"	"96.8"	""	"250"	"30"	"30.000"	"23.000"	"0.0119099520502956"	"14"	"0.003317"	"0.03636"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYPGHGR"	"[K].iYPGHGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"P83732"	"60S ribosomal protein L24 OS=Rattus norvegicus OX=10116 GN=Rpl24 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"514.79553"	"1028.58379"	"1028.58388"	"-0.09"	"-0.00005"	"5/50"	"5"	"50"	"630910.489379883"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"22.6144"	"4295"	"4295"	"4288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.7"	""	"60.9"	""	"62.4"	""	"65.1"	"0.3"	"62.1"	"50.9"	""	"276"	"21"	"31.000"	"24.000"	"0.102536641029745"	"17"	"0.003529"	"0.03877"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLENGR"	"[R].lPLEnGR.[F]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"514.79999"	"1028.59270"	"1028.59378"	"-1.05"	"-0.00054"	"6/52"	"6"	"52"	"1322077.48846436"	"HCD"	"MS2"	"37.76556"	"74.6"	"100.000"	"51.7279"	"16020"	"16020"	"15994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.0"	""	"100.4"	""	"101.4"	""	"114.3"	""	"131.5"	"158.1"	""	"328"	"15"	"32.000"	"25.000"	"0.49299651363103"	"20"	"0.002628"	"0.02779"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLENGR"	"[R].lPLEnGR.[F]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"514.80011"	"1028.59294"	"1028.59378"	"-0.81"	"-0.00042"	"6/52"	"6"	"52"	"950082.988220215"	"HCD"	"MS2"	"24.12692"	"45.6"	"100.000"	"53.8837"	"16899"	"16899"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.5"	""	"48.0"	""	"62.0"	""	"83.2"	"0.1"	"77.2"	"84.5"	""	"328"	"25"	"32.000"	"25.000"	"0.0559556375059963"	"22"	"0.0006415"	"0.007215"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLENGR"	"[R].lPLEnGR.[F]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"514.80029"	"1028.59331"	"1028.59378"	"-0.45"	"-0.00023"	"6/52"	"6"	"52"	"899060.542419434"	"HCD"	"MS2"	"17.08512"	"42.0"	"100.000"	"53.5502"	"16796"	"16796"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"45.1"	""	"62.3"	""	"67.7"	"2.0"	"83.3"	"73.3"	""	"326"	"23"	"32.000"	"25.000"	"0.0729772685807471"	"23"	"0.0001991"	"0.00403"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPLENGR"	"[R].lPLEnGR.[F]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"D3ZDK7"	"Glycerol-3-phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pgp PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"514.80042"	"1028.59355"	"1028.59378"	"-0.22"	"-0.00011"	"6/52"	"6"	"52"	"1280968.83380127"	"HCD"	"MS2"	"16.24304"	"69.2"	"100.000"	"51.3664"	"15907"	"15907"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.3"	""	"87.3"	""	"100.4"	""	"111.2"	"1.1"	"119.9"	"130.5"	""	"330"	"17"	"32.000"	"25.000"	"0.313677916187344"	"17"	"0.002328"	"0.02203"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"515.31586"	"1029.62444"	"1029.62541"	"-0.94"	"-0.00049"	"6/56"	"6"	"56"	"10672367.9499512"	"HCD"	"MS2"	"2.817897"	"433.3"	"100.000"	"43.1413"	"12535"	"12535"	"12514"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"754.3"	""	"655.7"	""	"637.1"	""	"616.1"	""	"718.3"	"718.6"	""	"375"	"34"	"32.000"	"25.000"	"0.00711215596825653"	""	"0.0001991"	"0.003903"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"515.31616"	"1029.62505"	"1029.62541"	"-0.35"	"-0.00018"	"6/56"	"6"	"56"	"12069603.4395752"	"HCD"	"MS2"	"1.181517"	"460.3"	"100.000"	"42.9988"	"12511"	"12511"	"12491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"763.0"	""	"723.8"	""	"673.6"	""	"685.1"	""	"759.6"	"753.7"	""	"369"	"34"	"32.000"	"25.000"	"0.00696620692257393"	"21"	"0.0001991"	"0.003686"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"515.31628"	"1029.62529"	"1029.62541"	"-0.11"	"-0.00006"	"6/56"	"6"	"56"	"8829104.00292969"	"HCD"	"MS2"	"1.911968"	"356.7"	"100.000"	"43.4379"	"12657"	"12657"	"12640"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"582.3"	""	"515.0"	""	"551.7"	""	"482.9"	""	"611.7"	"631.6"	""	"369"	"35"	"32.000"	"25.000"	"0.00534559891930894"	"22"	"0.0001686"	"0.001485"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVVGEGR"	"[R].iAVVGEGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"515.31641"	"1029.62554"	"1029.62541"	"0.12"	"0.00006"	"6/56"	"6"	"56"	"7757385.88018799"	"HCD"	"MS2"	"2.402448"	"312.9"	"100.000"	"43.3024"	"12636"	"12636"	"12619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"496.2"	""	"452.6"	""	"463.2"	""	"438.2"	"1.5"	"541.8"	"567.9"	""	"369"	"33"	"32.000"	"25.000"	"0.00961604241988873"	"20"	"0.0001686"	"0.001506"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALEER"	"[R].lAALEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"3"	"515.80786"	"1030.60845"	"1030.60943"	"-0.95"	"-0.00049"	"5/50"	"5"	"50"	"1639245.42663574"	"HCD"	"MS2"	"31.27831"	"86.1"	"100.000"	"53.7802"	"16890"	"16890"	"16864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.5"	""	"92.5"	""	"105.4"	""	"155.4"	""	"159.4"	"191.5"	""	"507"	"23"	"34.000"	"27.000"	"0.14189855197901"	"17"	"0.00452"	"0.05274"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNILGR"	"[K].dLnILGR.[D]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q5XIK8"	"CTD small phosphatase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Ctdspl2 PE=1 SV=1"	"Q5XIK8"	"CTD small phosphatase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Ctdspl2 PE=1 SV=1"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"515.80817"	"1030.60906"	"1030.60943"	"-0.36"	"-0.00018"	"6/56"	"6"	"56"	"2303459.89276123"	"HCD"	"MS2"	"0"	"103.3"	"100.000"	"84.0408"	"29157"	"29157"	"29140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.5"	""	"127.1"	""	"115.4"	""	"196.9"	""	"213.1"	"201.9"	""	"497"	"34"	"33.000"	"26.000"	"0.00984750915124766"	""	"0.006814"	"0.08472"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAALEER"	"[R].lAALEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"B0BNI5"	"Olfactomedin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Olfml3 PE=2 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"3"	"515.80817"	"1030.60906"	"1030.60943"	"-0.36"	"-0.00018"	"5/50"	"5"	"50"	"1636814.06445313"	"HCD"	"MS2"	"37.10128"	"87.9"	"100.000"	"54.1714"	"17016"	"17016"	"16993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.6"	""	"95.9"	""	"101.2"	""	"144.2"	""	"187.1"	"197.5"	""	"497"	"16"	"33.000"	"26.000"	"0.684425832779534"	"20"	"0.002525"	"0.02521"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLLR"	"[K].eVDGLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"515.80835"	"1030.60942"	"1030.60943"	"0.00"	"0.00000"	"5/52"	"5"	"52"	"1026382.35217285"	"HCD"	"MS2"	"11.7621"	"60.7"	"100.000"	"57.8013"	"18521"	"18521"	"18498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.6"	""	"79.3"	""	"79.6"	""	"104.8"	""	"117.0"	"116.8"	""	"497"	"23"	"33.000"	"26.000"	"0.118666024503936"	""	"0.009411"	"0.1238"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNILGR"	"[K].dLnILGR.[D]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q5XIK8"	"CTD small phosphatase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Ctdspl2 PE=1 SV=1"	"Q5XIK8"	"CTD small phosphatase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Ctdspl2 PE=1 SV=1"	"0"	"2"	"2"	"0.0882"	"0.0000"	"1"	"1"	"1"	"515.80835"	"1030.60942"	"1030.60943"	"0.00"	"0.00000"	"10/56"	"10"	"56"	"5224405.25256348"	"HCD"	"MS2"	"1.573102"	"222.4"	"100.000"	"83.7486"	"29010"	"29010"	"28996"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.4"	""	"283.8"	""	"243.1"	""	"418.6"	""	"486.0"	"412.6"	""	"497"	"34"	"33.000"	"26.000"	"0.0091269651673774"	""	"0.005832"	"0.07138"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLLR"	"[K].eVDGLLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"Q498R3"	"DnaJ homolog subfamily C member 10 OS=Rattus norvegicus OX=10116 GN=Dnajc10 PE=2 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"515.80859"	"1030.60991"	"1030.60943"	"0.47"	"0.00024"	"5/52"	"5"	"52"	"1028703.6817627"	"HCD"	"MS2"	"25.94255"	"62.3"	"100.000"	"58.1259"	"18618"	"18618"	"18594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.5"	""	"76.0"	""	"90.9"	""	"105.3"	""	"113.9"	"121.0"	""	"409"	"25"	"33.000"	"26.000"	"0.0607705703490427"	""	"0.005426"	"0.06871"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLGLLR"	"[R].eTLGLLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62818"	"Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus OX=10116 GN=Eif2b2 PE=2 SV=1"	"Q62818"	"Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus OX=10116 GN=Eif2b2 PE=2 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"515.82507"	"1030.64287"	"1030.64581"	"-2.85"	"-0.00147"	"5/50"	"5"	"50"	"1120175.13830566"	"HCD"	"MS2"	"15.81564"	"59.5"	"100.000"	"69.2988"	"23187"	"23187"	"23167"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"70.8"	""	"84.1"	""	"103.4"	""	"107.2"	"115.8"	""	"384"	"26"	"32.000"	"25.000"	"0.0480066309445715"	"23"	"0.008718"	"0.1105"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLGLLR"	"[R].eTLGLLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62818"	"Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus OX=10116 GN=Eif2b2 PE=2 SV=1"	"Q62818"	"Translation initiation factor eIF-2B subunit beta OS=Rattus norvegicus OX=10116 GN=Eif2b2 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"515.82532"	"1030.64336"	"1030.64581"	"-2.38"	"-0.00123"	"5/50"	"5"	"50"	"1231777.58911133"	"HCD"	"MS2"	"15.31685"	"64.5"	"100.000"	"69.2073"	"23116"	"23116"	"23092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.1"	""	"92.3"	""	"93.7"	""	"102.4"	"0.8"	"111.2"	"116.6"	""	"384"	"26"	"32.000"	"25.000"	"0.0486744697055598"	"24"	"0.008029"	"0.102"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLPNTGK"	"[-].mLPNTGk.[L]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"516.29028"	"1031.57329"	"1031.57568"	"-2.32"	"-0.00120"	"5/54"	"5"	"54"	"770630.51159668"	"HCD"	"MS2"	"38.78072"	"32.1"	"100.000"	"70.4399"	"23617"	"23617"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.4"	""	"42.1"	""	"42.2"	""	"48.9"	"2.9"	"66.8"	"61.6"	""	"468"	"31"	"33.000"	"26.000"	"0.0188458555240581"	"20"	"0.009886"	"0.1333"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSEGQR"	"[R].lLSEGQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"516.30536"	"1031.60344"	"1031.60467"	"-1.20"	"-0.00062"	"5/52"	"5"	"52"	"4654772.94293213"	"HCD"	"MS2"	"8.88592"	"247.9"	"100.000"	"36.5135"	"9846"	"9846"	"9837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"410.7"	""	"333.4"	""	"360.3"	""	"386.4"	"3.2"	"413.6"	"437.5"	""	"556"	"29"	"34.000"	"27.000"	"0.0386406831477312"	""	"0.00307"	"0.03416"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSEGQR"	"[R].lLSEGQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"516.30560"	"1031.60393"	"1031.60467"	"-0.72"	"-0.00037"	"5/52"	"5"	"52"	"4754728.77020264"	"HCD"	"MS2"	"5.588057"	"278.9"	"100.000"	"36.4291"	"9849"	"9849"	"9836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"414.0"	""	"376.4"	""	"425.2"	""	"430.5"	"12.0"	"494.3"	"488.0"	""	"556"	"29"	"34.000"	"27.000"	"0.0379354111971721"	"26"	"0.004357"	"0.05116"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLESALR"	"[K].nLESALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"516.30585"	"1031.60442"	"1031.60467"	"-0.25"	"-0.00013"	"5/62"	"5"	"62"	"5619889.0300293"	"HCD"	"MS2"	"23.13595"	"275.0"	"100.000"	"45.8242"	"13628"	"13628"	"13605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.7"	""	"293.2"	""	"330.8"	""	"542.1"	""	"550.7"	"548.0"	""	"554"	"22"	"34.000"	"27.000"	"0.162734550650748"	"27"	"0.006814"	"0.08508"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLESALR"	"[K].nLESALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"516.30621"	"1031.60515"	"1031.60467"	"0.46"	"0.00024"	"4/62"	"4"	"62"	"7625713.87823486"	"HCD"	"MS2"	"9.01617"	"320.9"	"100.000"	"45.8530"	"13674"	"13674"	"13653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"393.3"	""	"371.7"	""	"414.0"	""	"601.3"	""	"630.9"	"637.4"	""	"519"	"20"	"34.000"	"27.000"	"0.253593058838033"	"23"	"0.00511"	"0.06531"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALSGHR"	"[K].yALSGHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"516.79279"	"1032.57829"	"1032.57879"	"-0.48"	"-0.00025"	"5/48"	"5"	"48"	"1120415.81738281"	"HCD"	"MS2"	"19.19046"	"91.9"	"100.000"	"23.8339"	"4797"	"4797"	"4772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.3"	""	"113.3"	""	"134.7"	""	"154.2"	"3.9"	"158.6"	"183.3"	""	"547"	"21"	"34.000"	"27.000"	"0.206042746681172"	"14"	"0.002189"	"0.02108"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALSGHR"	"[K].yALSGHR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"516.79285"	"1032.57842"	"1032.57879"	"-0.37"	"-0.00019"	"5/48"	"5"	"48"	"793477.506103516"	"HCD"	"MS2"	"33.0892"	"72.3"	"100.000"	"23.9334"	"4800"	"4800"	"4775"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.5"	""	"81.5"	""	"92.9"	""	"129.5"	"5.6"	"129.9"	"138.6"	""	"547"	"18"	"34.000"	"27.000"	"0.444587584697758"	"15"	"0.001615"	"0.01478"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"516.79688"	"1032.58647"	"1032.58869"	"-2.15"	"-0.00111"	"7/72"	"7"	"72"	"2667760.65093994"	"HCD"	"MS2"	"0"	"59.3"	"100.000"	"55.5591"	"17616"	"17616"	"17604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	"4.3"	"73.1"	""	"85.2"	""	"94.2"	""	"112.0"	"104.3"	""	"587"	"54"	"34.000"	"27.000"	"0.000111072898614467"	""	"0.0001991"	"0.002129"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDLAR"	"[K].eLSDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"516.79730"	"1032.58733"	"1032.58869"	"-1.32"	"-0.00068"	"5/54"	"5"	"54"	"5261685.49346924"	"HCD"	"MS2"	"4.83392"	"239.9"	"100.000"	"48.5774"	"14741"	"14741"	"14728"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.7"	""	"316.2"	""	"324.6"	""	"413.5"	""	"426.1"	"439.4"	""	"608"	"36"	"34.000"	"27.000"	"0.00712645559857257"	""	"0.003317"	"0.03637"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.5686"	"0.0000"	"1"	"1"	"1"	"516.79736"	"1032.58745"	"1032.58869"	"-1.20"	"-0.00062"	"7/72"	"7"	"72"	"2593711.74371338"	"HCD"	"MS2"	"0"	"62.2"	"100.000"	"55.8838"	"17713"	"17713"	"17701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.4"	"2.7"	"94.3"	""	"84.4"	""	"95.3"	""	"113.2"	"118.5"	""	"608"	"51"	"34.000"	"27.000"	"0.000218209464546494"	""	"0.0005161"	"0.006793"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.5283"	"0.0000"	"1"	"1"	"1"	"516.79736"	"1032.58745"	"1032.58869"	"-1.20"	"-0.00062"	"7/72"	"7"	"72"	"3928832.62896729"	"HCD"	"MS2"	"38.49823"	"129.7"	"100.000"	"55.2680"	"17497"	"17497"	"17474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.3"	""	"171.3"	""	"170.9"	""	"223.9"	""	"247.7"	"248.5"	""	"608"	"53"	"34.000"	"27.000"	"0.000167445539707243"	""	"0.0001686"	"0.001153"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDLAR"	"[K].eLSDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"516.79742"	"1032.58757"	"1032.58869"	"-1.08"	"-0.00056"	"5/54"	"5"	"54"	"5419955.41094971"	"HCD"	"MS2"	"8.409115"	"251.4"	"100.000"	"48.2885"	"14659"	"14659"	"14655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"352.7"	""	"312.4"	""	"332.7"	""	"453.5"	""	"454.7"	"479.3"	""	"608"	"36"	"34.000"	"27.000"	"0.00701251145370902"	""	"0.003529"	"0.03914"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDLAR"	"[K].eLSDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"516.79749"	"1032.58769"	"1032.58869"	"-0.96"	"-0.00050"	"5/54"	"5"	"54"	"3403487.0814209"	"HCD"	"MS2"	"34.2515"	"170.3"	"100.000"	"48.0255"	"14554"	"14554"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"245.6"	""	"211.8"	""	"237.3"	""	"303.5"	""	"326.6"	"292.4"	""	"608"	"36"	"34.000"	"27.000"	"0.00837285525814803"	""	"0.00212"	"0.01912"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDLAR"	"[K].eLSDLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"P61078"	"Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus OX=10116 GN=Ube2d3 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"516.79767"	"1032.58806"	"1032.58869"	"-0.61"	"-0.00031"	"5/54"	"5"	"54"	"3249550.60235596"	"HCD"	"MS2"	"10.805"	"160.8"	"100.000"	"48.3020"	"14629"	"14629"	"14605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.9"	""	"208.6"	""	"220.4"	""	"265.5"	""	"297.4"	"292.3"	""	"608"	"36"	"34.000"	"27.000"	"0.0081072503401453"	""	"0.002189"	"0.02069"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASNAGSIA"	"[R].iASNAGSIA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"P62832"	"60S ribosomal protein L23 OS=Rattus norvegicus OX=10116 GN=Rpl23 PE=2 SV=1"	"0"	"2"	"2"	"0.5686"	"0.0000"	"1"	"1"	"1"	"516.79773"	"1032.58818"	"1032.58869"	"-0.49"	"-0.00025"	"7/72"	"7"	"72"	"3860833.66540527"	"HCD"	"MS2"	"40.25243"	"122.5"	"100.000"	"55.5923"	"17595"	"17595"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.6"	""	"184.6"	""	"167.7"	""	"212.9"	""	"229.6"	"229.7"	""	"612"	"51"	"34.000"	"27.000"	"0.000271469739683616"	""	"0.0003938"	"0.006234"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLIER"	"[K].vSSLIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"516.81549"	"1032.62370"	"1032.62508"	"-1.33"	"-0.00069"	"6/56"	"6"	"56"	"2146656.79736328"	"HCD"	"MS2"	"36.32537"	"112.0"	"100.000"	"55.3574"	"17499"	"17499"	"17480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.9"	""	"140.5"	""	"161.9"	""	"201.5"	"2.6"	"199.0"	"204.5"	""	"466"	"20"	"33.000"	"26.000"	"0.213971494980674"	"19"	"0.002588"	"0.0264"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSLIER"	"[K].vSSLIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"516.81549"	"1032.62370"	"1032.62508"	"-1.33"	"-0.00069"	"6/56"	"6"	"56"	"2329194.53057861"	"HCD"	"MS2"	"26.92353"	"120.8"	"100.000"	"55.0771"	"17419"	"17419"	"17394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.9"	""	"158.7"	""	"177.0"	""	"216.5"	""	"221.9"	"213.7"	""	"466"	"16"	"33.000"	"26.000"	"0.655172893482953"	"21"	"0.004213"	"0.04734"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPGIER"	"[K].sFPGIER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"517.79492"	"1034.58257"	"1034.58321"	"-0.62"	"-0.00032"	"4/58"	"4"	"58"	"3646736.4954834"	"HCD"	"MS2"	"17.05"	"188.3"	"100.000"	"53.5938"	"16780"	"16780"	"16761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.5"	""	"698.4"	""	"164.8"	""	"239.8"	"3.3"	"260.1"	"238.1"	""	"508"	"20"	"34.000"	"27.000"	"0.257533491977117"	"24"	"0.005589"	"0.0706"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFPGIER"	"[K].sFPGIER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"517.79517"	"1034.58306"	"1034.58321"	"-0.15"	"-0.00008"	"4/58"	"4"	"58"	"2444009.82971191"	"HCD"	"MS2"	"19.95691"	"121.4"	"100.000"	"53.5870"	"16811"	"16811"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.6"	""	"406.4"	""	"120.8"	""	"142.0"	"1.1"	"176.5"	"176.8"	""	"509"	"21"	"34.000"	"27.000"	"0.18607489674653"	"18"	"0.004392"	"0.05198"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGTVMR"	"[K].eLGTVMR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"517.79626"	"1034.58525"	"1034.58658"	"-1.28"	"-0.00066"	"5/54"	"5"	"54"	"11903964.9998779"	"HCD"	"MS2"	"34.50148"	"591.8"	"88.801"	"44.9640"	"13277"	"13277"	"13266"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"915.8"	""	"938.9"	""	"876.6"	""	"824.5"	"13.3"	"1042.7"	"987.5"	""	"525"	"22"	"34.000"	"27.000"	"0.185835768400836"	"23"	"0.009751"	"0.1297"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGTVMR"	"[K].eLGTVMR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"517.79669"	"1034.58611"	"1034.58658"	"-0.46"	"-0.00024"	"5/54"	"5"	"54"	"12112683.6164551"	"HCD"	"MS2"	"7.675552"	"374.2"	"56.592"	"45.0845"	"13361"	"13361"	"13344"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"533.3"	""	"573.1"	""	"598.2"	""	"486.0"	""	"663.0"	"695.8"	""	"525"	"29"	"34.000"	"27.000"	"0.0317782010057002"	"23"	"0.003208"	"0.03468"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGTVMR"	"[K].eLGTVMR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"517.79675"	"1034.58623"	"1034.58658"	"-0.34"	"-0.00018"	"5/54"	"5"	"54"	"15260927.6980591"	"HCD"	"MS2"	"4.860468"	"633.8"	"86.819"	"45.2513"	"13395"	"13395"	"13378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"893.6"	""	"1041.1"	""	"1066.9"	""	"796.1"	""	"1083.6"	"1117.1"	""	"525"	"34"	"34.000"	"27.000"	"0.00966338555811644"	"24"	"0.00329"	"0.03508"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGTVMR"	"[K].eLGTVMR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"517.79675"	"1034.58623"	"1034.58658"	"-0.34"	"-0.00018"	"5/54"	"5"	"54"	"14056804.9052734"	"HCD"	"MS2"	"23.35679"	"690.3"	"100.000"	"44.7881"	"13240"	"13240"	"13226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1064.0"	""	"1099.3"	""	"1111.3"	""	"917.1"	"9.9"	"1177.6"	"1149.9"	""	"525"	"29"	"34.000"	"27.000"	"0.0315594414087071"	"25"	"0.002875"	"0.03114"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMAITPR"	"[R].tmAITPR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"517.79718"	"1034.58708"	"1034.58658"	"0.48"	"0.00025"	"6/56"	"6"	"56"	"2695856.64221191"	"HCD"	"MS2"	"40.66573"	"172.8"	"100.000"	"26.3094"	"5798"	"5798"	"5774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.5"	""	"199.8"	""	"228.9"	""	"335.2"	"4.6"	"336.1"	"301.5"	""	"502"	"10"	"33.000"	"27.000"	"2.45286542459908"	"17"	"0.008893"	"0.1133"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVNGFGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"517.80023"	"1034.59319"	"1034.59444"	"-1.22"	"-0.00063"	"7/66"	"7"	"66"	"7582505.63989258"	"HCD"	"MS2"	"24.90602"	"433.5"	"100.000"	"46.0112"	"13739"	"13739"	"13717"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"637.8"	""	"592.0"	""	"618.8"	""	"655.1"	""	"776.1"	"829.8"	""	"505"	"24"	"34.000"	"27.000"	"0.108958566899011"	"14"	"0.0001991"	"0.00498"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVNGFGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"517.80023"	"1034.59319"	"1034.59444"	"-1.22"	"-0.00063"	"6/66"	"6"	"66"	"8012890.28790283"	"HCD"	"MS2"	"26.94941"	"441.1"	"100.000"	"46.2953"	"13820"	"13820"	"13804"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"674.5"	""	"604.1"	""	"654.5"	""	"645.1"	""	"785.3"	"822.0"	""	"505"	"23"	"34.000"	"27.000"	"0.13685522482641"	"14"	"0.001348"	"0.01088"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"518.29254"	"1035.57781"	"1035.57846"	"-0.63"	"-0.00033"	"6/66"	"6"	"66"	"4760915.36981201"	"HCD"	"MS2"	"31.45704"	"185.3"	"100.000"	"50.4807"	"15515"	"15515"	"15494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.4"	""	"241.6"	""	"329.5"	""	"252.4"	"1.2"	"302.2"	"334.8"	""	"430"	"30"	"33.000"	"26.000"	"0.0236830951551404"	"16"	"0.0001686"	"0.001954"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"518.29254"	"1035.57781"	"1035.57846"	"-0.63"	"-0.00033"	"6/66"	"6"	"66"	"7078600.08032227"	"HCD"	"MS2"	"1.220883"	"308.4"	"100.000"	"54.9601"	"17337"	"17337"	"17319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"465.9"	""	"445.8"	""	"471.6"	""	"433.2"	""	"504.9"	"601.3"	""	"430"	"32"	"33.000"	"26.000"	"0.013786005896581"	"18"	"0.0001991"	"0.00281"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"518.29260"	"1035.57793"	"1035.57846"	"-0.51"	"-0.00027"	"6/66"	"6"	"66"	"81611303.3618164"	"HCD"	"MS2"	"0"	"522.6"	"15.908"	"50.7797"	"15638"	"15638"	"15621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"884.9"	""	"706.6"	""	"723.7"	""	"774.4"	""	"834.4"	"1029.5"	""	"432"	"37"	"33.000"	"26.000"	"0.00479130426676847"	"19"	"0.0001991"	"0.003334"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"518.29266"	"1035.57805"	"1035.57846"	"-0.40"	"-0.00020"	"6/66"	"6"	"66"	"4963418.00848389"	"HCD"	"MS2"	"45.06512"	"240.9"	"100.000"	"52.1855"	"16239"	"16239"	"16219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"354.2"	""	"301.6"	""	"314.8"	""	"387.0"	""	"457.1"	"473.2"	""	"432"	"33"	"33.000"	"26.000"	"0.0116266273023518"	"15"	"0.0001991"	"0.002149"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"518.29266"	"1035.57805"	"1035.57846"	"-0.40"	"-0.00020"	"7/66"	"7"	"66"	"43644205.0231934"	"HCD"	"MS2"	"0"	"557.5"	"29.164"	"52.4732"	"16357"	"16357"	"16342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"869.1"	""	"746.1"	""	"799.0"	""	"819.4"	""	"927.9"	"1126.9"	""	"432"	"32"	"33.000"	"26.000"	"0.0146707984645312"	"19"	"0.001261"	"0.009741"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"518.29272"	"1035.57817"	"1035.57846"	"-0.28"	"-0.00014"	"6/66"	"6"	"66"	"4743757.77496338"	"HCD"	"MS2"	"39.5987"	"252.3"	"100.000"	"52.4848"	"16327"	"16327"	"16307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.5"	""	"292.6"	""	"333.7"	""	"390.3"	""	"506.0"	"510.7"	""	"432"	"33"	"33.000"	"26.000"	"0.0119799153998909"	"16"	"0.0001991"	"0.002121"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"518.29272"	"1035.57817"	"1035.57846"	"-0.28"	"-0.00014"	"6/66"	"6"	"66"	"4690959.89434814"	"HCD"	"MS2"	"24.31662"	"187.8"	"100.000"	"50.1692"	"15423"	"15423"	"15403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.1"	""	"247.7"	""	"313.9"	""	"265.6"	"0.2"	"296.9"	"356.9"	""	"432"	"29"	"33.000"	"26.000"	"0.0279546301753197"	"16"	"0.0001991"	"0.00314"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"518.29279"	"1035.57829"	"1035.57846"	"-0.16"	"-0.00008"	"6/66"	"6"	"66"	"4805430.28869629"	"HCD"	"MS2"	"12.28124"	"210.8"	"100.000"	"54.3739"	"17132"	"17132"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"364.0"	""	"296.5"	""	"284.9"	""	"296.5"	""	"334.2"	"421.5"	""	"432"	"40"	"33.000"	"26.000"	"0.00221540816070304"	"19"	"0.0001686"	"0.001644"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"518.29279"	"1035.57829"	"1035.57846"	"-0.16"	"-0.00008"	"6/66"	"6"	"66"	"6302123.10742188"	"HCD"	"MS2"	"3.88193"	"265.4"	"100.000"	"54.6565"	"17247"	"17247"	"17236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"420.8"	""	"371.8"	""	"396.2"	""	"383.9"	""	"422.6"	"518.7"	""	"432"	"34"	"33.000"	"26.000"	"0.00811808793263039"	"18"	"0.0001991"	"0.0025"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"518.29285"	"1035.57842"	"1035.57846"	"-0.04"	"-0.00002"	"6/66"	"6"	"66"	"44360486.7331543"	"HCD"	"MS2"	"0.1544333"	"566.8"	"28.940"	"52.7860"	"16450"	"16450"	"16432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"884.2"	""	"750.3"	""	"829.6"	""	"825.3"	""	"910.6"	"1172.6"	""	"431"	"36"	"33.000"	"26.000"	"0.0058136284769188"	"19"	"0.0005161"	"0.006861"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"518.29291"	"1035.57854"	"1035.57846"	"0.08"	"0.00004"	"6/66"	"6"	"66"	"3679780.50421143"	"HCD"	"MS2"	"14.13995"	"160.5"	"100.000"	"54.6731"	"17220"	"17220"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"270.6"	""	"226.0"	""	"229.6"	""	"222.8"	""	"255.9"	"317.6"	""	"431"	"34"	"33.000"	"26.000"	"0.00877904498667862"	"19"	"9.9E-05"	"0.000847"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.29321"	"1035.57915"	"1035.57846"	"0.67"	"0.00034"	"6/66"	"6"	"66"	"68244074.5219727"	"HCD"	"MS2"	"0.5058274"	"695.5"	"25.832"	"50.4543"	"15540"	"15540"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1182.8"	""	"966.1"	""	"957.2"	""	"975.5"	""	"1103.4"	"1407.8"	""	"401"	"33"	"33.000"	"26.000"	"0.0109172781894905"	"15"	"0.0005161"	"0.006709"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"518.29340"	"1035.57952"	"1035.57846"	"1.02"	"0.00053"	"6/66"	"6"	"66"	"34674255.0102539"	"HCD"	"MS2"	"0.2252198"	"419.0"	"31.115"	"51.0879"	"15764"	"15764"	"15747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"669.7"	""	"540.9"	""	"606.7"	""	"601.6"	""	"692.8"	"860.7"	""	"401"	"38"	"33.000"	"26.000"	"0.00302771070909912"	"19"	"0.0001991"	"0.002074"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGFGR"	"[K].vGVnGFGR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"518.29370"	"1035.58013"	"1035.57846"	"1.61"	"0.00083"	"6/66"	"6"	"66"	"51996174.5263672"	"HCD"	"MS2"	"0.07483517"	"482.5"	"23.296"	"50.7416"	"15656"	"15656"	"15644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"741.7"	""	"643.4"	""	"708.7"	""	"693.0"	""	"802.2"	"982.9"	""	"409"	"34"	"33.000"	"26.000"	"0.00768587491769868"	"18"	"0.0001991"	"0.005725"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYNLVR"	"[R].aAYNLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"518.31024"	"1035.61321"	"1035.61485"	"-1.58"	"-0.00082"	"4/56"	"4"	"56"	"12629881.3598633"	"HCD"	"MS2"	"3.138455"	"530.5"	"80.016"	"44.2258"	"12978"	"12978"	"12961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"846.6"	""	"758.8"	""	"767.4"	""	"806.2"	""	"905.5"	"939.6"	""	"259"	"25"	"31.000"	"24.000"	"0.045948333905748"	""	"0.00329"	"0.035"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYNLVR"	"[R].aAYNLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"518.31036"	"1035.61345"	"1035.61485"	"-1.35"	"-0.00070"	"4/56"	"4"	"56"	"12633958.2121582"	"HCD"	"MS2"	"5.531198"	"586.7"	"86.937"	"44.0472"	"12940"	"12940"	"12922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"919.5"	""	"827.7"	""	"825.9"	""	"932.0"	""	"1021.0"	"1034.9"	""	"259"	"25"	"31.000"	"24.000"	"0.0457372204880584"	""	"0.002628"	"0.0277"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"518.78442"	"1036.56157"	"1036.56248"	"-0.87"	"-0.00045"	"10/50"	"10"	"50"	"21366387.2822266"	"HCD"	"MS2"	"0.1408162"	"365.8"	"41.622"	"52.9817"	"16564"	"16564"	"16546"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"564.4"	"2.9"	"480.2"	""	"578.7"	""	"540.9"	""	"560.4"	"738.8"	""	"445"	"28"	"33.000"	"26.000"	"0.0377859212672738"	""	"0.00307"	"0.03296"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"518.78491"	"1036.56255"	"1036.56248"	"0.07"	"0.00004"	"10/50"	"10"	"50"	"19531009.668335"	"HCD"	"MS2"	"0.1094389"	"415.6"	"51.629"	"53.2807"	"16652"	"16652"	"16634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"620.2"	""	"546.3"	""	"675.5"	""	"618.1"	""	"654.2"	"823.6"	""	"451"	"28"	"33.000"	"26.000"	"0.0384721578720204"	""	"0.003818"	"0.04207"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"518.78638"	"1036.56548"	"1036.56248"	"2.90"	"0.00150"	"8/50"	"8"	"50"	"49365503.9589844"	"HCD"	"MS2"	"0.1206483"	"520.8"	"24.236"	"52.6688"	"16437"	"16437"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"792.5"	""	"694.9"	""	"801.9"	""	"789.3"	""	"814.9"	"1045.1"	""	"420"	"23"	"33.000"	"26.000"	"0.107453185463464"	"26"	"0.009312"	"0.1206"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADDFR"	"[RK].lAADDFR.[LMTSV]"	"N-Term(TMT6plex)"	"3"	"10"	"Q6IFW6; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1;Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q6IFV4; Q6IFX1; Q6IFU7; Q6IFV3; Q6IFU8; Q6IFV1; Q6IFW6; Q6IFW2; Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 24 OS=Rattus norvegicus OX=10116 GN=Krt24 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 40 OS=Rattus norvegicus OX=10116 GN=Krt40 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"518.78687"	"1036.56645"	"1036.56248"	"3.84"	"0.00199"	"6/50"	"6"	"50"	"46446425.1899414"	"HCD"	"MS2"	"0"	"646.3"	"31.609"	"52.9633"	"16523"	"16523"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"986.8"	""	"883.8"	""	"1001.4"	""	"979.8"	""	"1012.6"	"1273.4"	""	"409"	"19"	"33.000"	"26.000"	"0.25333390194546"	"26"	"0.009348"	"0.1215"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFIATR"	"[R].aEFIATR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"518.80249"	"1036.59770"	"1036.59886"	"-1.12"	"-0.00058"	"4/56"	"4"	"56"	"2663344.90203857"	"HCD"	"MS2"	"49.83406"	"132.9"	"100.000"	"45.8275"	"13664"	"13664"	"13637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.4"	""	"161.6"	""	"200.1"	""	"212.6"	""	"257.8"	"262.6"	""	"338"	"19"	"32.000"	"25.000"	"0.215718158689117"	"17"	"0.002834"	"0.03048"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFIATR"	"[R].aEFIATR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"518.80249"	"1036.59770"	"1036.59886"	"-1.12"	"-0.00058"	"5/56"	"5"	"56"	"2833660.2623291"	"HCD"	"MS2"	"46.07761"	"132.4"	"100.000"	"46.1438"	"13759"	"13759"	"13729"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.7"	""	"188.4"	""	"177.0"	""	"201.9"	""	"248.4"	"266.7"	""	"338"	"18"	"32.000"	"25.000"	"0.295724090377567"	"17"	"0.00307"	"0.03355"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"518.80255"	"1036.59783"	"1036.59886"	"-1.00"	"-0.00052"	"5/48"	"5"	"48"	"8388169.3682251"	"HCD"	"MS2"	"14.16788"	"423.6"	"100.000"	"45.4332"	"13468"	"13468"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"589.5"	""	"609.3"	""	"619.0"	""	"637.2"	""	"789.9"	"775.6"	""	"332"	"29"	"32.000"	"25.000"	"0.018884612944669"	"23"	"0.00296"	"0.03163"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"518.80267"	"1036.59807"	"1036.59886"	"-0.76"	"-0.00040"	"5/48"	"5"	"48"	"9128646.95269775"	"HCD"	"MS2"	"11.51821"	"451.9"	"100.000"	"45.2041"	"13409"	"13409"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"646.0"	""	"628.1"	""	"655.0"	""	"683.0"	""	"862.7"	"812.2"	""	"332"	"30"	"32.000"	"25.000"	"0.0183699548140293"	"24"	"0.002834"	"0.03053"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTFLVR"	"[ARK].dGTFLVR.[DE]"	"N-Term(TMT6plex)"	"2"	"2"	"Q63787; P24135"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"Q63787; P24135"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1; 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"518.80280"	"1036.59831"	"1036.59886"	"-0.53"	"-0.00027"	"6/52"	"6"	"52"	"2662844.54455566"	"HCD"	"MS2"	"27.4882"	"113.7"	"100.000"	"55.2266"	"17480"	"17480"	"17458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.1"	""	"144.4"	""	"164.1"	""	"178.6"	"0.8"	"222.3"	"202.4"	""	"334"	"18"	"32.000"	"25.000"	"0.293573243531102"	"22"	"0.002525"	"0.02424"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"518.80280"	"1036.59831"	"1036.59886"	"-0.53"	"-0.00027"	"5/48"	"5"	"48"	"6372517.07214355"	"HCD"	"MS2"	"7.259101"	"292.3"	"100.000"	"45.5007"	"13530"	"13530"	"13512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"392.5"	""	"382.2"	""	"431.0"	""	"449.2"	""	"559.2"	"561.6"	""	"334"	"22"	"32.000"	"25.000"	"0.117683742517514"	"24"	"0.002588"	"0.0268"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGVYAR"	"[K].iEGVYAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"518.80310"	"1036.59892"	"1036.59886"	"0.06"	"0.00003"	"5/48"	"5"	"48"	"7743626.4956665"	"HCD"	"MS2"	"3.835527"	"361.8"	"100.000"	"45.7343"	"13591"	"13591"	"13573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"493.3"	""	"452.7"	""	"525.0"	""	"542.6"	""	"699.4"	"722.5"	""	"334"	"30"	"32.000"	"25.000"	"0.0181015794641541"	"23"	"0.001951"	"0.01692"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDASER"	"[R].tMDASER.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"519.75781"	"1038.50835"	"1038.50873"	"-0.36"	"-0.00019"	"5/58"	"5"	"58"	"681551.254455566"	"HCD"	"MS2"	"27.87217"	"57.2"	"100.000"	"21.7634"	"4017"	"4017"	"4002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.9"	""	"75.5"	""	"81.4"	""	"70.0"	""	"110.5"	"123.1"	""	"294"	"32"	"31.000"	"24.000"	"0.00845896707885621"	"18"	"0.004213"	"0.04709"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMDASER"	"[R].tMDASER.[G]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"519.75787"	"1038.50847"	"1038.50873"	"-0.25"	"-0.00013"	"5/58"	"5"	"58"	"674231.73815918"	"HCD"	"MS2"	"16.06322"	"59.9"	"100.000"	"21.8451"	"4011"	"4011"	"4001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"82.3"	""	"87.9"	""	"76.9"	""	"106.1"	"124.6"	""	"294"	"29"	"31.000"	"24.000"	"0.0173907108691599"	"14"	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGSEIR"	"[KR].fTGSEIR.[VH]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03346; Q68FY0"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3;Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q03346; Q68FY0"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"519.79047"	"1038.57366"	"1038.57813"	"-4.30"	"-0.00223"	"5/54"	"5"	"54"	"5698318.00610352"	"HCD"	"MS2"	"5.62849"	"277.9"	"100.000"	"41.1287"	"11753"	"11753"	"11739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"357.3"	""	"364.4"	""	"420.1"	""	"406.8"	"1.6"	"512.6"	"571.8"	""	"333"	"39"	"32.000"	"25.000"	"0.00196523385836013"	"22"	"0.001615"	"0.01465"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTGSEIR"	"[KR].fTGSEIR.[VH]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03346; Q68FY0"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3;Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q03346; Q68FY0"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3; Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"519.79083"	"1038.57439"	"1038.57813"	"-3.60"	"-0.00187"	"5/54"	"5"	"54"	"5376678.97241211"	"HCD"	"MS2"	"0"	"265.6"	"100.000"	"41.2795"	"11777"	"11777"	"11758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.8"	""	"373.9"	""	"375.6"	""	"392.5"	""	"510.0"	"561.8"	""	"328"	"35"	"32.000"	"25.000"	"0.00540559927971031"	"18"	"0.001951"	"0.01713"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAYILR"	"[K].sSAYILR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"519.81000"	"1038.61272"	"1038.61451"	"-1.73"	"-0.00090"	"4/50"	"4"	"50"	"3390039.05310059"	"HCD"	"MS2"	"16.69193"	"183.1"	"100.000"	"44.3410"	"13060"	"13060"	"13045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"255.5"	""	"251.6"	""	"236.6"	""	"292.0"	"10.5"	"363.6"	"326.2"	""	"196"	"22"	"29.000"	"22.000"	"0.0677994351500557"	"16"	"0.002189"	"0.02095"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAYILR"	"[K].sSAYILR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"519.81036"	"1038.61345"	"1038.61451"	"-1.02"	"-0.00053"	"5/50"	"5"	"50"	"3817376.79168701"	"HCD"	"MS2"	"16.9836"	"197.1"	"100.000"	"44.5538"	"13111"	"13111"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"303.4"	""	"273.8"	""	"251.6"	""	"304.5"	"4.6"	"381.5"	"348.7"	""	"196"	"24"	"29.000"	"22.000"	"0.0407592398284142"	"20"	"0.001348"	"0.01125"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISDHIR"	"[K].aISDHIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"520.80585"	"1040.60442"	"1040.60501"	"-0.57"	"-0.00030"	"9/50"	"9"	"50"	"5306337.63568115"	"HCD"	"MS2"	"22.62439"	"274.3"	"100.000"	"25.8783"	"5584"	"5584"	"5557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"406.3"	""	"381.6"	""	"391.0"	""	"456.2"	""	"474.2"	"492.1"	""	"228"	"19"	"30.000"	"23.000"	"0.130288130166034"	"18"	"0.006542"	"0.08112"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISDHIR"	"[K].aISDHIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"520.80609"	"1040.60491"	"1040.60501"	"-0.10"	"-0.00005"	"6/50"	"6"	"50"	"5347261.13537598"	"HCD"	"MS2"	"9.424138"	"282.1"	"100.000"	"25.7865"	"5586"	"5586"	"5562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"423.9"	""	"355.9"	""	"379.4"	""	"458.2"	""	"516.7"	"541.4"	""	"228"	"22"	"30.000"	"23.000"	"0.0737742581953385"	"20"	"0.002525"	"0.02486"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPIIVK"	"[M].sLPIIVk.[W]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"520.84888"	"1040.69048"	"1040.69170"	"-1.17"	"-0.00061"	"5/48"	"5"	"48"	"899778.695373535"	"HCD"	"MS2"	"49.15561"	"21.0"	"100.000"	"112.4119"	"40501"	"40501"	"40479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	""	"34.3"	""	"27.9"	""	"33.6"	""	"37.1"	"37.7"	""	"58"	"36"	"24.000"	"17.000"	"0.000735187302844393"	"15"	"0.001951"	"0.01659"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPWHSR"	"[M].aVFPWHSR.[N]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"521.26648"	"1041.52568"	"1041.52648"	"-0.76"	"-0.00040"	"6/56"	"6"	"56"	"1092094.2845459"	"HCD"	"MS2"	"42.10224"	"11.7"	"100.000"	"80.0897"	"27531"	"27531"	"27509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.4"	""	"15.0"	""	"14.9"	""	"19.0"	""	"24.3"	"24.1"	"NoQuanLabels"	"224"	"26"	"30.000"	"23.000"	"0.0272406849016267"	"17"	"0.005392"	"0.06834"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPWHSR"	"[M].aVFPWHSR.[N]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"521.26660"	"1041.52593"	"1041.52648"	"-0.53"	"-0.00027"	"7/56"	"7"	"56"	"1302777.10742188"	"HCD"	"MS2"	"24.89111"	"11.2"	"100.000"	"79.7813"	"27405"	"27405"	"27383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"14.8"	""	"18.4"	""	"15.3"	""	"24.8"	"24.1"	"NoQuanLabels"	"220"	"38"	"30.000"	"23.000"	"0.00176356992975904"	"20"	"0.002525"	"0.02417"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPWHSR"	"[M].aVFPWHSR.[N]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"521.26660"	"1041.52593"	"1041.52648"	"-0.53"	"-0.00027"	"6/56"	"6"	"56"	"1411600.97381592"	"HCD"	"MS2"	"20.48265"	"14.3"	"100.000"	"79.8292"	"27452"	"27452"	"27429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"16.5"	""	"13.8"	""	"26.2"	""	"31.8"	"33.7"	"NoQuanLabels"	"220"	"41"	"30.000"	"23.000"	"0.000906551926514302"	""	"0.002525"	"0.02364"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFPWHSR"	"[M].aVFPWHSR.[N]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.26666"	"1041.52605"	"1041.52648"	"-0.41"	"-0.00021"	"5/56"	"5"	"56"	"1142220.51501465"	"HCD"	"MS2"	"16.66911"	"11.5"	"100.000"	"80.1288"	"27574"	"27574"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"13.6"	""	"16.0"	""	"21.2"	""	"27.5"	"19.1"	"NoQuanLabels"	"220"	"36"	"30.000"	"23.000"	"0.00246827011616104"	"15"	"0.0009352"	"0.007879"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"521.31598"	"1041.62468"	"1041.62541"	"-0.70"	"-0.00036"	"5/54"	"5"	"54"	"2798901.87280273"	"HCD"	"MS2"	"25.62787"	"125.1"	"100.000"	"49.1262"	"14964"	"14964"	"14937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.5"	""	"154.4"	""	"173.5"	""	"218.4"	""	"227.1"	"231.7"	""	"224"	"23"	"30.000"	"23.000"	"0.0523863358241662"	"22"	"0.002462"	"0.02301"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"521.31604"	"1041.62480"	"1041.62541"	"-0.58"	"-0.00030"	"5/54"	"5"	"54"	"6354405.62722778"	"HCD"	"MS2"	"5.930729"	"265.2"	"100.000"	"49.0625"	"14973"	"14973"	"14956"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"354.9"	""	"321.4"	""	"334.2"	""	"489.2"	"1.6"	"504.8"	"508.8"	""	"224"	"24"	"30.000"	"23.000"	"0.0446907890645599"	"22"	"0.002755"	"0.02928"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELQGPR"	"[R].lELQGPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"521.31604"	"1041.62480"	"1041.62541"	"-0.58"	"-0.00030"	"5/54"	"5"	"54"	"5781784.31665039"	"HCD"	"MS2"	"3.616735"	"246.6"	"100.000"	"49.4087"	"15078"	"15078"	"15064"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.6"	""	"289.5"	""	"319.3"	""	"444.4"	""	"477.4"	"477.8"	""	"224"	"25"	"30.000"	"23.000"	"0.0335906202126617"	"23"	"0.002799"	"0.02953"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEAHSR"	"[K].tIEAHSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"521.79535"	"1042.58342"	"1042.58427"	"-0.82"	"-0.00043"	"5/58"	"5"	"58"	"1402252.33258057"	"HCD"	"MS2"	"18.03775"	"89.9"	"100.000"	"18.9957"	"2943"	"2943"	"2920"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.0"	""	"118.3"	""	"126.3"	""	"146.6"	"0.7"	"168.6"	"161.1"	""	"296"	"24"	"31.000"	"24.000"	"0.0624110825074302"	"14"	"0.001615"	"0.01332"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEAHSR"	"[K].tIEAHSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"521.79565"	"1042.58403"	"1042.58427"	"-0.23"	"-0.00012"	"5/58"	"5"	"58"	"1233035.30426025"	"HCD"	"MS2"	"14.87432"	"78.6"	"100.000"	"19.0248"	"2915"	"2915"	"2891"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.1"	""	"103.3"	""	"111.6"	""	"133.7"	"0.6"	"137.1"	"147.3"	""	"296"	"24"	"31.000"	"24.000"	"0.0609904328264049"	"17"	"0.00192"	"0.01598"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQAVLL"	"[R].eAAQAVLL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"D4A2H2"	"Serine palmitoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Sptlc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"522.31854"	"1043.62981"	"1043.62983"	"-0.02"	"-0.00001"	"6/56"	"6"	"56"	"468001.812744141"	"HCD"	"MS2"	"54.60601"	"14.0"	"100.000"	"94.0274"	"33145"	"33145"	"33115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"16.0"	""	"24.0"	""	"22.1"	""	"20.7"	"33.5"	""	"330"	"25"	"32.000"	"25.000"	"0.0472589365034586"	"24"	"0.0001991"	"0.005826"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATHLMR"	"[R].sATHLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"522.79431"	"1044.58135"	"1044.58217"	"-0.78"	"-0.00041"	"6/52"	"6"	"52"	"9238839.91766357"	"HCD"	"MS2"	"24.80717"	"409.2"	"100.000"	"21.5531"	"3937"	"3937"	"3913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"566.0"	""	"613.6"	""	"679.3"	""	"501.5"	""	"694.6"	"823.4"	""	"478"	"25"	"33.000"	"26.000"	"0.0844107775802777"	"22"	"0.003529"	"0.03858"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATHLMR"	"[R].sATHLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"522.79443"	"1044.58159"	"1044.58217"	"-0.55"	"-0.00029"	"6/52"	"6"	"52"	"11388359.796875"	"HCD"	"MS2"	"4.829541"	"490.9"	"100.000"	"21.6178"	"3926"	"3926"	"3910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"661.5"	""	"727.7"	""	"814.5"	""	"592.7"	""	"816.9"	"1043.9"	""	"478"	"24"	"33.000"	"26.000"	"0.100322397173851"	"18"	"0.004998"	"0.06326"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.1200"	"0.0000"	"1"	"1"	"1"	"522.81549"	"1044.62370"	"1044.62508"	"-1.31"	"-0.00069"	"5/58"	"5"	"58"	"3736183.23516846"	"HCD"	"MS2"	"22.55142"	"178.1"	"100.000"	"56.0243"	"17800"	"17800"	"17787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.1"	""	"261.6"	""	"244.9"	""	"285.4"	"0.5"	"300.8"	"306.5"	""	"525"	"25"	"34.000"	"27.000"	"0.0755317083868113"	""	"0.001951"	"0.01649"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"522.81549"	"1044.62370"	"1044.62508"	"-1.31"	"-0.00069"	"5/56"	"5"	"56"	"5581510.25415039"	"HCD"	"MS2"	"9.185411"	"224.3"	"100.000"	"52.9909"	"16568"	"16568"	"16546"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"359.0"	""	"302.0"	""	"310.3"	""	"361.3"	""	"398.5"	"394.2"	""	"525"	"28"	"34.000"	"27.000"	"0.0433639972035116"	"27"	"0.003401"	"0.03804"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"522.81555"	"1044.62383"	"1044.62508"	"-1.20"	"-0.00062"	"5/58"	"5"	"58"	"13919726.7761841"	"HCD"	"MS2"	"0"	"544.5"	"96.905"	"56.6329"	"18011"	"18011"	"18001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"723.6"	""	"778.4"	""	"745.3"	""	"863.0"	""	"1020.1"	"1039.5"	""	"525"	"30"	"34.000"	"27.000"	"0.0240507878657025"	""	"0.002711"	"0.02875"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"522.81561"	"1044.62395"	"1044.62508"	"-1.08"	"-0.00056"	"5/58"	"5"	"58"	"4525736.1751709"	"HCD"	"MS2"	"0"	"202.1"	"100.000"	"56.5879"	"18027"	"18027"	"18011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.1"	""	"269.4"	""	"287.5"	""	"302.9"	""	"398.8"	"413.6"	""	"525"	"30"	"34.000"	"27.000"	"0.0272979043530128"	""	"0.001951"	"0.01719"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPTEVR"	"[R].lTPTEVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"522.81561"	"1044.62395"	"1044.62508"	"-1.08"	"-0.00056"	"7/54"	"7"	"54"	"9638807.97070313"	"HCD"	"MS2"	"23.71149"	"417.9"	"100.000"	"39.0450"	"10877"	"10877"	"10857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"625.2"	""	"541.0"	""	"585.6"	""	"638.0"	"0.6"	"787.6"	"781.4"	""	"525"	"30"	"34.000"	"27.000"	"0.0248959846616486"	"27"	"0.007069"	"0.0891"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"522.81567"	"1044.62407"	"1044.62508"	"-0.96"	"-0.00050"	"5/56"	"5"	"56"	"2251656.17810059"	"HCD"	"MS2"	"23.58523"	"106.8"	"100.000"	"52.6916"	"16446"	"16446"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.1"	""	"144.3"	""	"133.0"	""	"171.8"	"0.1"	"205.4"	"188.4"	""	"525"	"29"	"34.000"	"27.000"	"0.031705113171553"	"27"	"0.00307"	"0.03322"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"522.81573"	"1044.62419"	"1044.62508"	"-0.84"	"-0.00044"	"5/58"	"5"	"58"	"2781486.93243408"	"HCD"	"MS2"	"0"	"136.4"	"100.000"	"56.9286"	"18130"	"18130"	"18110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.9"	""	"184.8"	""	"187.3"	""	"220.4"	""	"260.2"	"287.9"	""	"525"	"25"	"34.000"	"27.000"	"0.0762305946796918"	""	"0.002588"	"0.02684"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLVER"	"[RK].lADLVER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q66HF8; Q63639"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"5/54"	"5"	"54"	"2191549.34155273"	"HCD"	"MS2"	"20.85121"	"90.1"	"100.000"	"72.7249"	"24542"	"24542"	"24523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.6"	""	"111.9"	""	"130.3"	""	"136.4"	""	"170.0"	"173.5"	""	"527"	"23"	"34.000"	"27.000"	"0.122118263350512"	"22"	"0.002035"	"0.0179"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"5/58"	"5"	"58"	"4485313.29486084"	"HCD"	"MS2"	"0"	"196.7"	"100.000"	"56.3443"	"17895"	"17895"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"294.6"	""	"289.6"	""	"283.0"	""	"321.2"	"0.2"	"344.4"	"328.9"	""	"527"	"28"	"34.000"	"27.000"	"0.0439319640507205"	""	"0.002834"	"0.03005"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"6/54"	"6"	"54"	"7679814.36450195"	"HCD"	"MS2"	"10.03698"	"298.7"	"100.000"	"85.3489"	"29685"	"29685"	"29669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"420.3"	""	"412.3"	""	"425.2"	""	"478.8"	""	"537.5"	"558.1"	""	"527"	"35"	"34.000"	"27.000"	"0.00930637652401805"	""	"0.001103"	"0.009121"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILPSTR"	"[R].eILPSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"4/58"	"4"	"58"	"5740031.89300537"	"HCD"	"MS2"	"15.4753"	"221.7"	"100.000"	"42.6902"	"12385"	"12385"	"12367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.4"	""	"267.1"	""	"277.3"	""	"395.7"	"1.8"	"424.8"	"433.9"	""	"527"	"17"	"34.000"	"27.000"	"0.48504342238707"	"26"	"0.004234"	"0.04799"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIIGDR"	"[R].eLIIGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"6/58"	"6"	"58"	"14240822.2304077"	"HCD"	"MS2"	"0"	"563.9"	"100.000"	"56.2945"	"17909"	"17909"	"17898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"761.3"	""	"769.8"	""	"782.5"	""	"907.4"	""	"1061.7"	"1068.1"	""	"527"	"36"	"34.000"	"27.000"	"0.00714135495003237"	""	"0.001488"	"0.01271"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPTEVR"	"[R].lTPTEVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"522.81580"	"1044.62432"	"1044.62508"	"-0.73"	"-0.00038"	"7/54"	"7"	"54"	"9941240.25012207"	"HCD"	"MS2"	"18.00743"	"419.3"	"100.000"	"38.9621"	"10879"	"10879"	"10861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"614.9"	""	"564.4"	""	"575.0"	""	"648.8"	"2.5"	"809.1"	"759.1"	""	"527"	"30"	"34.000"	"27.000"	"0.0252220637786191"	"27"	"0.006814"	"0.08497"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNIALLR"	"[R].nnIALLR.[T]"	"N-Term(TMT6plex); N1(Deamidated); N2(Deamidated)"	"1"	"1"	"Q6AY28"	"Inactive serine protease 54 OS=Rattus norvegicus OX=10116 GN=Prss54 PE=1 SV=1"	"Q6AY28"	"Inactive serine protease 54 OS=Rattus norvegicus OX=10116 GN=Prss54 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"522.81586"	"1044.62444"	"1044.62508"	"-0.61"	"-0.00032"	"5/62"	"5"	"62"	"1341757.628479"	"HCD"	"MS2"	"42.01423"	"57.8"	"100.000"	"72.4336"	"24424"	"24424"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.8"	""	"78.1"	""	"82.5"	""	"105.8"	"0.2"	"95.8"	"105.2"	""	"527"	"26"	"34.000"	"27.000"	"0.0720743309381819"	""	"0.000885"	"0.007679"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLVER"	"[RK].lADLVER.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q66HF8; Q63639"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"522.81586"	"1044.62444"	"1044.62508"	"-0.61"	"-0.00032"	"6/54"	"6"	"54"	"1830066.7868042"	"HCD"	"MS2"	"33.998"	"76.5"	"100.000"	"72.7306"	"24574"	"24574"	"24552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.7"	""	"96.0"	""	"109.8"	""	"117.3"	""	"146.1"	"145.4"	""	"527"	"18"	"34.000"	"27.000"	"0.374783635406863"	"23"	"0.001951"	"0.01672"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSPTER"	"[R].lLSPTER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"522.81586"	"1044.62444"	"1044.62508"	"-0.61"	"-0.00032"	"4/54"	"4"	"54"	"3506187.27044678"	"HCD"	"MS2"	"9.206868"	"159.9"	"100.000"	"44.3133"	"13013"	"13013"	"12993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.2"	""	"213.7"	""	"251.1"	""	"232.8"	""	"286.1"	"279.8"	""	"527"	"23"	"34.000"	"27.000"	"0.119889353849538"	"26"	"0.005392"	"0.0684"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"522.81592"	"1044.62456"	"1044.62508"	"-0.49"	"-0.00026"	"5/56"	"5"	"56"	"5509860.33178711"	"HCD"	"MS2"	"7.962687"	"216.5"	"100.000"	"53.2877"	"16655"	"16655"	"16634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"349.2"	""	"303.4"	""	"314.4"	""	"339.1"	""	"378.6"	"364.3"	""	"527"	"28"	"34.000"	"27.000"	"0.0431301153396227"	"27"	"0.003317"	"0.03651"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"522.81592"	"1044.62456"	"1044.62508"	"-0.49"	"-0.00026"	"6/54"	"6"	"54"	"7236063.82183838"	"HCD"	"MS2"	"10.16586"	"274.3"	"100.000"	"85.3613"	"29661"	"29661"	"29652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"392.8"	""	"379.2"	""	"390.0"	""	"430.3"	""	"503.8"	"503.5"	""	"527"	"33"	"34.000"	"27.000"	"0.0134518067493519"	"26"	"0.002035"	"0.01817"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILPSTR"	"[R].eILPSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"522.81604"	"1044.62480"	"1044.62508"	"-0.26"	"-0.00014"	"4/58"	"4"	"58"	"5459133.14569092"	"HCD"	"MS2"	"17.96161"	"224.9"	"100.000"	"42.8836"	"12430"	"12430"	"12409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"319.3"	""	"266.7"	""	"273.5"	""	"400.2"	"1.1"	"429.2"	"442.6"	""	"527"	"17"	"34.000"	"27.000"	"0.474002486136436"	"26"	"0.005082"	"0.06442"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSPTER"	"[R].lLSPTER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"522.81604"	"1044.62480"	"1044.62508"	"-0.26"	"-0.00014"	"4/54"	"4"	"54"	"6565647.03546143"	"HCD"	"MS2"	"19.10269"	"315.3"	"100.000"	"44.0008"	"12885"	"12885"	"12865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"500.4"	""	"442.0"	""	"452.2"	""	"525.6"	"3.0"	"520.8"	"538.4"	""	"527"	"24"	"34.000"	"27.000"	"0.11060649228163"	"27"	"0.006613"	"0.08235"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLPTLR"	"[R].eSLPTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"522.81610"	"1044.62493"	"1044.62508"	"-0.14"	"-0.00008"	"9/56"	"9"	"56"	"2102148.14337158"	"HCD"	"MS2"	"50.43381"	"95.7"	"100.000"	"52.9931"	"16535"	"16535"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"142.2"	""	"128.6"	""	"124.6"	""	"160.7"	"0.4"	"176.4"	"173.5"	""	"514"	"19"	"34.000"	"27.000"	"0.291697779627785"	"25"	"0.002189"	"0.02132"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"3"	"522.81622"	"1044.62517"	"1044.62508"	"0.09"	"0.00005"	"6/54"	"6"	"54"	"3121946.23095703"	"HCD"	"MS2"	"47.16149"	"115.5"	"100.000"	"85.0492"	"29563"	"29563"	"29545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.8"	""	"153.6"	""	"151.5"	""	"216.9"	""	"211.6"	"211.5"	""	"515"	"32"	"34.000"	"27.000"	"0.0170913840628491"	""	"0.001049"	"0.008511"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLSPTER"	"[R].lLSPTER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"522.81622"	"1044.62517"	"1044.62508"	"0.09"	"0.00005"	"4/54"	"4"	"54"	"5695596.29956055"	"HCD"	"MS2"	"21.80308"	"261.5"	"100.000"	"43.8175"	"12846"	"12846"	"12826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"419.8"	""	"360.6"	""	"371.7"	""	"419.7"	"6.6"	"433.9"	"461.3"	""	"515"	"24"	"34.000"	"27.000"	"0.11266194207825"	"27"	"0.009846"	"0.133"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLLDR"	"[K].aLDLLDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"3"	"522.81647"	"1044.62566"	"1044.62508"	"0.56"	"0.00029"	"6/54"	"6"	"54"	"3844638.08575439"	"HCD"	"MS2"	"41.14541"	"145.2"	"100.000"	"85.0732"	"29544"	"29544"	"29527"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.3"	""	"180.5"	""	"201.1"	""	"251.6"	""	"267.5"	"270.9"	""	"426"	"29"	"33.000"	"26.000"	"0.0273136414105733"	""	"0.0005778"	"0.00714"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDVIVR"	"[K].tIDVIVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"522.83368"	"1044.66008"	"1044.66146"	"-1.32"	"-0.00069"	"7/52"	"7"	"52"	"1492472.46636963"	"HCD"	"MS2"	"40.18628"	"73.4"	"100.000"	"64.8845"	"21396"	"21396"	"21373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.0"	""	"91.9"	""	"105.4"	""	"118.2"	""	"147.0"	"141.2"	""	"359"	"17"	"32.000"	"25.000"	"0.398166257354139"	"23"	"0.002035"	"0.01839"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAELSQR"	"[R].lAELSQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"523.31366"	"1045.62004"	"1045.62032"	"-0.27"	"-0.00014"	"5/54"	"5"	"54"	"2998810.93121338"	"HCD"	"MS2"	"10.64765"	"156.4"	"100.000"	"45.8175"	"13625"	"13625"	"13605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.7"	""	"167.8"	""	"191.1"	""	"311.0"	"0.5"	"301.7"	"301.7"	""	"649"	"24"	"35.000"	"28.000"	"0.116470167792304"	"27"	"0.002834"	"0.03036"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAELSQR"	"[R].lAELSQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"523.31378"	"1045.62029"	"1045.62032"	"-0.04"	"-0.00002"	"5/54"	"5"	"54"	"3058888.2779541"	"HCD"	"MS2"	"5.925109"	"166.1"	"100.000"	"45.5906"	"13567"	"13567"	"13544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.1"	""	"191.6"	""	"198.0"	""	"326.3"	"5.1"	"318.5"	"317.7"	""	"631"	"24"	"34.000"	"28.000"	"0.121618421843551"	"28"	"0.00394"	"0.04281"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGK"	"[R].VTLELGGk.[S]"	"K8(TMT6plex)"	"4"	"5"	"P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3;Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"Q66HF8; P13601; Q63639; P51647; P11884"	"Aldehyde dehydrogenase X, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh1b1 PE=1 SV=1; Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3; Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"523.32617"	"1045.64507"	"1045.64548"	"-0.39"	"-0.00020"	"6/60"	"6"	"60"	"973244.56628418"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"55.6254"	"17642"	"17642"	"17622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.0"	""	"54.5"	""	"80.0"	""	"70.6"	""	"83.9"	"84.6"	""	"506"	"31"	"34.000"	"27.000"	"0.0184128290547816"	"21"	"0.002711"	"0.02829"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASELLR"	"[R].eASELLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"523.80505"	"1046.60283"	"1046.60434"	"-1.44"	"-0.00075"	"5/54"	"5"	"54"	"6896743.92523193"	"HCD"	"MS2"	"12.8307"	"370.5"	"100.000"	"44.5451"	"13142"	"13142"	"13125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"537.6"	""	"502.5"	""	"492.8"	""	"547.6"	"35.7"	"653.8"	"741.7"	""	"655"	"25"	"35.000"	"28.000"	"0.11199826742324"	""	"0.009411"	"0.1236"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"523.80530"	"1046.60332"	"1046.60434"	"-0.98"	"-0.00051"	"10/54"	"10"	"54"	"1163794.38519287"	"HCD"	"MS2"	"6.042736"	"67.0"	"100.000"	"53.8723"	"16894"	"16894"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.2"	""	"94.4"	""	"89.9"	""	"106.4"	"0.7"	"131.9"	"131.4"	""	"655"	"24"	"35.000"	"28.000"	"0.123086749904466"	"23"	"0.001615"	"0.01422"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"523.80530"	"1046.60332"	"1046.60434"	"-0.98"	"-0.00051"	"9/54"	"9"	"54"	"3471842.49932861"	"HCD"	"MS2"	"3.825008"	"154.9"	"100.000"	"53.2858"	"16688"	"16688"	"16671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.1"	""	"187.6"	""	"192.4"	""	"271.9"	"0.9"	"291.2"	"297.1"	""	"655"	"31"	"35.000"	"28.000"	"0.0285240575710617"	""	"0.002588"	"0.02615"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"523.80554"	"1046.60381"	"1046.60434"	"-0.51"	"-0.00027"	"5/54"	"5"	"54"	"1061016.21014404"	"HCD"	"MS2"	"9.708267"	"60.4"	"100.000"	"53.5938"	"16814"	"16814"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.0"	""	"76.0"	""	"87.5"	""	"96.3"	"0.7"	"123.6"	"107.5"	""	"656"	"21"	"35.000"	"28.000"	"0.250538137013483"	"21"	"0.002035"	"0.01771"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDVVR"	"[K].sLEDVVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"523.80560"	"1046.60393"	"1046.60434"	"-0.39"	"-0.00021"	"9/54"	"9"	"54"	"3444437.09399414"	"HCD"	"MS2"	"12.31468"	"157.9"	"100.000"	"53.5617"	"16767"	"16767"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"214.9"	""	"201.5"	""	"192.4"	""	"286.0"	""	"295.1"	"310.3"	""	"656"	"31"	"35.000"	"28.000"	"0.028831938552053"	"22"	"0.001872"	"0.01548"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANSGITR"	"[K].vANSGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"523.81073"	"1046.61418"	"1046.61557"	"-1.33"	"-0.00070"	"6/72"	"6"	"72"	"2244392.09997559"	"HCD"	"MS2"	"16.90764"	"128.7"	"100.000"	"26.8934"	"5978"	"5978"	"5968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.3"	""	"148.2"	""	"154.4"	""	"262.6"	"0.9"	"262.1"	"244.8"	""	"550"	"37"	"34.000"	"27.000"	"0.00561477934784121"	"21"	"0.0005161"	"0.006735"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGTVNIR"	"[K].aSGTVNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"3"	"523.81085"	"1046.61443"	"1046.61557"	"-1.10"	"-0.00057"	"6/64"	"6"	"64"	"4309432.65637207"	"HCD"	"MS2"	"22.81432"	"294.2"	"100.000"	"29.2189"	"6906"	"6906"	"6885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.2"	""	"384.9"	""	"397.8"	""	"495.5"	""	"555.2"	"582.1"	""	"550"	"5"	"34.000"	"27.000"	"9.2754009881189"	"17"	"0.009411"	"0.124"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGTVNIR"	"[K].aSGTVNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"523.81104"	"1046.61479"	"1046.61557"	"-0.75"	"-0.00039"	"6/64"	"6"	"64"	"3271758.93817139"	"HCD"	"MS2"	"15.26763"	"219.1"	"100.000"	"28.9908"	"6854"	"6854"	"6841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.8"	""	"279.2"	""	"300.3"	""	"349.5"	"1.8"	"429.8"	"424.6"	""	"564"	"15"	"34.000"	"27.000"	"0.975549045469664"	"18"	"0.001615"	"0.01378"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANSGITR"	"[K].vANSGITR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"523.81116"	"1046.61504"	"1046.61557"	"-0.51"	"-0.00027"	"7/72"	"7"	"72"	"2896775.61022949"	"HCD"	"MS2"	"100"	"238.2"	"100.000"	"26.4620"	"5854"	"5854"	"5846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.8"	""	"266.7"	"2.8"	"232.0"	""	"419.5"	"1.1"	"551.7"	"551.8"	""	"567"	"13"	"34.000"	"27.000"	"1.37262866210092"	"20"	"0.001615"	"0.01372"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSTIDR"	"[R].iLSTIDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"523.82367"	"1046.64006"	"1046.64073"	"-0.63"	"-0.00033"	"6/54"	"6"	"54"	"2086961.47937012"	"HCD"	"MS2"	"9.026483"	"95.2"	"100.000"	"65.4266"	"21584"	"21584"	"21567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.0"	""	"117.1"	""	"143.2"	""	"161.4"	""	"177.4"	"185.3"	""	"485"	"31"	"33.000"	"26.000"	"0.0179354279201623"	"25"	"0.001348"	"0.0112"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSTIDR"	"[R].iLSTIDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"523.82373"	"1046.64018"	"1046.64073"	"-0.52"	"-0.00027"	"6/54"	"6"	"54"	"2066912.39239502"	"HCD"	"MS2"	"14.55764"	"94.0"	"100.000"	"65.0251"	"21453"	"21453"	"21434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.8"	""	"121.9"	""	"135.1"	""	"168.9"	""	"176.5"	"173.9"	""	"485"	"25"	"33.000"	"26.000"	"0.0790153999929872"	"25"	"0.002328"	"0.02216"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSTIDR"	"[R].iLSTIDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"523.82391"	"1046.64055"	"1046.64073"	"-0.17"	"-0.00009"	"6/54"	"6"	"54"	"2486142.19342041"	"HCD"	"MS2"	"8.064642"	"108.4"	"100.000"	"65.1274"	"21461"	"21461"	"21441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.2"	""	"138.1"	""	"163.3"	""	"192.5"	"1.7"	"192.5"	"197.3"	""	"467"	"30"	"33.000"	"26.000"	"0.0215420428240637"	"24"	"0.001316"	"0.01034"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSTIDR"	"[R].iLSTIDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"523.82416"	"1046.64104"	"1046.64073"	"0.30"	"0.00016"	"6/54"	"6"	"54"	"2581882.91571045"	"HCD"	"MS2"	"3.966208"	"112.4"	"100.000"	"65.3147"	"21571"	"21571"	"21552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.4"	""	"142.9"	""	"163.9"	""	"175.2"	"0.3"	"220.4"	"201.0"	""	"467"	"31"	"33.000"	"26.000"	"0.0188055866019982"	"24"	"0.001049"	"0.008596"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"524.30328"	"1047.59929"	"1047.59959"	"-0.28"	"-0.00015"	"5/56"	"5"	"56"	"13683002.4789429"	"HCD"	"MS2"	"42.93625"	"658.1"	"100.000"	"36.7021"	"9922"	"9922"	"9902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"967.9"	""	"825.6"	""	"841.7"	""	"1064.9"	""	"1193.8"	"1350.2"	""	"675"	"23"	"35.000"	"28.000"	"0.164920171278206"	""	"0.003317"	"0.03698"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDSLNR"	"[K].tIDSLNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"524.30341"	"1047.59953"	"1047.59959"	"-0.05"	"-0.00003"	"5/56"	"5"	"56"	"12666495.489502"	"HCD"	"MS2"	"32.37004"	"633.2"	"100.000"	"36.5875"	"9914"	"9914"	"9899"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"912.7"	""	"817.4"	""	"799.2"	""	"1023.5"	""	"1168.4"	"1284.6"	""	"665"	"22"	"35.000"	"28.000"	"0.213693666007909"	""	"0.003529"	"0.03912"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"524.30487"	"1047.60246"	"1047.60361"	"-1.10"	"-0.00057"	"5/52"	"5"	"52"	"5649804.70324707"	"HCD"	"MS2"	"20.87638"	"151.6"	"100.000"	"54.5510"	"17205"	"17205"	"17188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.7"	""	"190.3"	""	"173.9"	""	"242.9"	"5.9"	"336.5"	"316.7"	""	"665"	"37"	"35.000"	"28.000"	"0.00719103909139234"	""	"0.001348"	"0.01078"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].VDPVNFk.[F]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"524.30505"	"1047.60283"	"1047.60361"	"-0.75"	"-0.00039"	"6/52"	"6"	"52"	"14602289.2133789"	"HCD"	"MS2"	"1.841651"	"240.8"	"58.302"	"51.4785"	"15919"	"15919"	"15901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.1"	""	"260.6"	""	"287.6"	""	"476.4"	""	"516.3"	"498.2"	""	"646"	"40"	"35.000"	"28.000"	"0.00335121678309218"	"19"	"0.005266"	"0.06779"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"524.30511"	"1047.60295"	"1047.60361"	"-0.63"	"-0.00033"	"5/52"	"5"	"52"	"4512925.30657959"	"HCD"	"MS2"	"11.85386"	"121.8"	"100.000"	"54.9211"	"17321"	"17321"	"17303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.1"	""	"133.9"	""	"147.6"	""	"204.3"	"6.8"	"254.0"	"259.4"	""	"646"	"30"	"35.000"	"28.000"	"0.0288537671245854"	"26"	"0.001261"	"0.01021"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"524.30518"	"1047.60307"	"1047.60361"	"-0.51"	"-0.00027"	"5/52"	"5"	"52"	"4198532.11352539"	"HCD"	"MS2"	"27.17356"	"136.2"	"100.000"	"54.2545"	"17083"	"17083"	"17063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.9"	""	"175.8"	""	"165.3"	""	"190.4"	"5.9"	"291.8"	"284.0"	""	"646"	"26"	"35.000"	"28.000"	"0.0805754096802574"	"25"	"0.002373"	"0.02247"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFK.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"524.30536"	"1047.60344"	"1047.60361"	"-0.16"	"-0.00009"	"5/52"	"5"	"52"	"5263181.75671387"	"HCD"	"MS2"	"25.41154"	"171.9"	"100.000"	"54.6362"	"17205"	"17205"	"17188"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.3"	""	"209.7"	""	"216.7"	""	"272.8"	"4.9"	"358.5"	"356.6"	""	"646"	"24"	"35.000"	"28.000"	"0.141319639966115"	"24"	"0.00307"	"0.03292"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].VDPVNFk.[F]"	"K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"524.30579"	"1047.60430"	"1047.60361"	"0.65"	"0.00034"	"6/52"	"6"	"52"	"14227613.9772339"	"HCD"	"MS2"	"0"	"386.8"	"99.757"	"51.1530"	"15824"	"15824"	"15814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"400.2"	""	"424.6"	""	"442.7"	""	"748.3"	""	"852.5"	"813.4"	""	"727"	"40"	"35.000"	"28.000"	"0.00368556788715283"	"20"	"0.007104"	"0.091"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNTNPSR"	"[R].mNTNPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"P35427"	"60S ribosomal protein L13a OS=Rattus norvegicus OX=10116 GN=Rpl13a PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"524.77393"	"1048.54057"	"1048.54069"	"-0.11"	"-0.00006"	"5/64"	"5"	"64"	"2517344.24279785"	"HCD"	"MS2"	"41.48646"	"190.8"	"100.000"	"21.4458"	"3856"	"3856"	"3833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"309.1"	""	"251.7"	""	"261.5"	""	"246.8"	"10.1"	"363.1"	"366.1"	""	"490"	"20"	"33.000"	"26.000"	"0.230232211088336"	"19"	"0.002711"	"0.02893"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLDGDR"	"[K].lMLDGDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"524.78619"	"1048.56511"	"1048.56585"	"-0.70"	"-0.00037"	"6/52"	"6"	"52"	"2393852.58685303"	"HCD"	"MS2"	"29.11406"	"108.3"	"100.000"	"54.4612"	"17134"	"17134"	"17112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.6"	""	"145.2"	""	"140.4"	""	"143.0"	""	"229.8"	"224.6"	""	"621"	"31"	"34.000"	"27.000"	"0.0231772339486326"	"23"	"0.001718"	"0.01523"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEIAAR"	"[K].fIEIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"524.82062"	"1048.63396"	"1048.63525"	"-1.23"	"-0.00064"	"5/48"	"5"	"48"	"753662.485961914"	"HCD"	"MS2"	"18.65279"	"38.2"	"100.000"	"78.3469"	"26848"	"26848"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.3"	""	"42.8"	""	"37.2"	""	"78.9"	""	"72.9"	"73.2"	""	"366"	"27"	"32.000"	"25.000"	"0.0359294930660996"	"21"	"0.0005161"	"0.006953"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEIAAR"	"[K].fIEIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"524.82068"	"1048.63408"	"1048.63525"	"-1.11"	"-0.00058"	"5/48"	"5"	"48"	"886100.12286377"	"HCD"	"MS2"	"45.49841"	"44.3"	"100.000"	"78.2641"	"26788"	"26788"	"26758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.9"	""	"48.8"	""	"40.9"	""	"84.9"	""	"99.0"	"95.9"	""	"366"	"24"	"32.000"	"25.000"	"0.0780640519406914"	"23"	"0.001348"	"0.01107"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEIAAR"	"[K].fIEIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"524.82080"	"1048.63432"	"1048.63525"	"-0.88"	"-0.00046"	"9/48"	"9"	"48"	"1164838.84014893"	"HCD"	"MS2"	"9.783871"	"56.8"	"100.000"	"78.9370"	"27088"	"27088"	"27073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"59.5"	""	"60.7"	""	"109.3"	"2.1"	"116.2"	"116.6"	""	"366"	"30"	"32.000"	"25.000"	"0.0196540062458448"	"25"	"0.000885"	"0.007721"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEIAAR"	"[K].fIEIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"524.82086"	"1048.63445"	"1048.63525"	"-0.76"	"-0.00040"	"5/48"	"5"	"48"	"802844.236328125"	"HCD"	"MS2"	"10.61379"	"42.4"	"100.000"	"78.8981"	"27046"	"27046"	"27024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"45.2"	""	"39.5"	""	"77.9"	""	"91.3"	"98.6"	""	"323"	"28"	"32.000"	"25.000"	"0.027175186086288"	"24"	"0.0007633"	"0.007354"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEIAAR"	"[K].fIEIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"524.82104"	"1048.63481"	"1048.63525"	"-0.41"	"-0.00022"	"9/48"	"9"	"48"	"2595809.9831543"	"HCD"	"MS2"	"4.396733"	"116.3"	"100.000"	"78.6441"	"26969"	"26969"	"26951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.1"	""	"131.7"	""	"117.7"	""	"217.1"	""	"244.9"	"231.1"	""	"323"	"30"	"32.000"	"25.000"	"0.016911126051022"	"25"	"0.001453"	"0.01157"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEIAAR"	"[K].fIEIAAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"524.82117"	"1048.63506"	"1048.63525"	"-0.18"	"-0.00009"	"9/48"	"9"	"48"	"2674616.08782959"	"HCD"	"MS2"	"4.675269"	"123.8"	"100.000"	"78.5824"	"26917"	"26917"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.1"	""	"138.8"	""	"129.4"	""	"247.8"	""	"247.4"	"249.2"	""	"323"	"30"	"32.000"	"25.000"	"0.016911126051022"	"25"	"0.001453"	"0.01157"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIFLVR"	"[K].gDIFLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"524.82129"	"1048.63530"	"1048.63525"	"0.05"	"0.00003"	"4/48"	"4"	"48"	"489453.807678223"	"HCD"	"MS2"	"9.004432"	"25.6"	"100.000"	"85.9504"	"29928"	"29928"	"29903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"32.1"	""	"37.1"	""	"41.2"	""	"46.8"	"45.7"	""	"323"	"22"	"32.000"	"25.000"	"0.0953174744477528"	"24"	"0.00394"	"0.04321"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIFLVR"	"[K].gDIFLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"524.82135"	"1048.63542"	"1048.63525"	"0.17"	"0.00009"	"4/48"	"4"	"48"	"392803.302246094"	"HCD"	"MS2"	"21.54773"	"21.9"	"100.000"	"85.8980"	"29877"	"29877"	"29854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"28.2"	""	"30.5"	""	"35.4"	""	"41.5"	"44.6"	""	"335"	"22"	"32.000"	"25.000"	"0.11429173126873"	"17"	"0.003357"	"0.03792"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDGTGGK"	"[R].gDGTGGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"525.30310"	"1049.59892"	"1049.59914"	"-0.21"	"-0.00011"	"6/52"	"6"	"52"	"5112464.26959229"	"HCD"	"MS2"	"0"	"432.8"	"100.000"	"21.0698"	"3703"	"3703"	"3684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"564.2"	""	"425.7"	""	"471.2"	""	"906.6"	""	"866.8"	"882.6"	""	"565"	"21"	"34.000"	"27.000"	"0.246047214162593"	"18"	"0.003401"	"0.03832"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDGTGGK"	"[R].gDGTGGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"525.30322"	"1049.59917"	"1049.59914"	"0.02"	"0.00001"	"6/52"	"6"	"52"	"6054527.21490479"	"HCD"	"MS2"	"0"	"487.9"	"100.000"	"21.0830"	"3745"	"3745"	"3731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"718.4"	""	"532.5"	""	"510.3"	""	"957.2"	""	"969.5"	"944.2"	""	"565"	"12"	"34.000"	"27.000"	"1.79894734656486"	"21"	"0.006845"	"0.08554"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAELDIN"	"[K].fAELDIN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"Q5U2N0"	"CTP synthase 2 OS=Rattus norvegicus OX=10116 GN=Ctps2 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"525.78705"	"1050.56682"	"1050.56689"	"-0.07"	"-0.00004"	"4/52"	"4"	"52"	"276940.023620605"	"HCD"	"MS2"	"26.02626"	"11.6"	"100.000"	"110.0179"	"39514"	"39514"	"39499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"13.5"	""	"19.1"	""	"18.7"	""	"23.1"	"18.5"	""	"563"	"21"	"34.000"	"27.000"	"0.223603398074885"	"22"	"0.002834"	"0.03071"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGEEIAR"	"[K].fGEEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"525.79224"	"1050.57720"	"1050.57813"	"-0.88"	"-0.00046"	"6/50"	"6"	"50"	"2448126.39715576"	"HCD"	"MS2"	"14.20595"	"167.0"	"100.000"	"47.0756"	"14167"	"14167"	"14145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.5"	""	"223.7"	""	"237.2"	""	"262.6"	"5.1"	"303.4"	"321.2"	""	"543"	"13"	"34.000"	"27.000"	"1.38921618349194"	"17"	"0.005392"	"0.0683"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLVGER"	"[R].tFLVGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"525.81030"	"1050.61333"	"1050.61451"	"-1.13"	"-0.00059"	"5/58"	"5"	"58"	"4327759.28295898"	"HCD"	"MS2"	"0"	"190.1"	"100.000"	"56.3840"	"17946"	"17946"	"17932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"275.6"	""	"265.5"	""	"276.3"	""	"314.8"	""	"329.4"	"341.9"	""	"349"	"34"	"32.000"	"25.000"	"0.00645350173716565"	"21"	"0.001718"	"0.01521"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFVTDR"	"[R].aIFVTDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"525.81036"	"1050.61345"	"1050.61451"	"-1.01"	"-0.00053"	"5/50"	"5"	"50"	"1405620.9050293"	"HCD"	"MS2"	"0"	"78.1"	"100.000"	"56.4243"	"17928"	"17928"	"17905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.9"	""	"121.2"	""	"108.5"	""	"110.6"	""	"154.3"	"142.0"	""	"349"	"22"	"32.000"	"25.000"	"0.116357781227777"	"22"	"0.001261"	"0.009775"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFLVGER"	"[R].tFLVGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"525.81036"	"1050.61345"	"1050.61451"	"-1.01"	"-0.00053"	"5/58"	"5"	"58"	"5069977.97125244"	"HCD"	"MS2"	"6.644765"	"224.3"	"100.000"	"56.7221"	"18046"	"18046"	"18029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"322.6"	""	"295.0"	""	"341.3"	""	"367.0"	"1.5"	"382.0"	"413.9"	""	"349"	"35"	"32.000"	"25.000"	"0.00606450601718394"	"21"	"0.002035"	"0.01788"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIFVTDR"	"[R].aIFVTDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"525.81061"	"1050.61394"	"1050.61451"	"-0.54"	"-0.00029"	"5/50"	"5"	"50"	"1223691.09985352"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"56.0951"	"17829"	"17829"	"17810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.5"	""	"99.8"	""	"99.9"	""	"112.8"	"0.9"	"127.6"	"145.1"	""	"340"	"23"	"32.000"	"25.000"	"0.0855951034939439"	"19"	"0.001217"	"0.00928"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEAVR"	"[K].lSFEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"525.81073"	"1050.61418"	"1050.61451"	"-0.31"	"-0.00016"	"5/52"	"5"	"52"	"752232.957763672"	"HCD"	"MS2"	"22.26999"	"42.2"	"100.000"	"68.9669"	"23052"	"23052"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"45.8"	""	"53.2"	""	"71.7"	"0.5"	"93.5"	"88.8"	""	"340"	"20"	"32.000"	"25.000"	"0.164986694431734"	"18"	"0.002588"	"0.02672"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEFAVSR"	"[R].lEFAVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P52481"	"Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"P52481"	"Adenylyl cyclase-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cap2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.81091"	"1050.61455"	"1050.61451"	"0.04"	"0.00002"	"5/56"	"5"	"56"	"705707.356384277"	"HCD"	"MS2"	"64.8405"	"54.1"	"100.000"	"70.2370"	"23535"	"23535"	"23512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.8"	""	"62.0"	""	"74.2"	""	"91.7"	""	"102.9"	"88.5"	""	"340"	"4"	"32.000"	"25.000"	"6.7522563409805"	"13"	"0.007522"	"0.09648"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEAVR"	"[K].lSFEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"P84903"	"Stromal interaction molecule 1 OS=Rattus norvegicus OX=10116 GN=Stim1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"525.81116"	"1050.61504"	"1050.61451"	"0.50"	"0.00026"	"5/52"	"5"	"52"	"715366.398925781"	"HCD"	"MS2"	"21.18877"	"40.9"	"100.000"	"68.9126"	"22996"	"22996"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.1"	""	"45.1"	""	"52.3"	""	"78.2"	""	"82.3"	"86.2"	""	"346"	"20"	"32.000"	"25.000"	"0.163322531597465"	"20"	"0.002525"	"0.02525"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADYLR"	"[R].aIADYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"525.81122"	"1050.61516"	"1050.61451"	"0.62"	"0.00032"	"7/48"	"7"	"48"	"755140.473876953"	"HCD"	"MS2"	"23.57464"	"41.4"	"100.000"	"70.8952"	"23834"	"23834"	"23813"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.0"	""	"52.5"	""	"53.0"	""	"69.9"	""	"76.2"	"84.5"	""	"344"	"12"	"32.000"	"25.000"	"1.06789473887571"	"16"	"0.002834"	"0.02983"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVQTDR"	"[K].fGVQTDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"526.28973"	"1051.57219"	"1051.57337"	"-1.13"	"-0.00059"	"6/56"	"6"	"56"	"3312616.17608643"	"HCD"	"MS2"	"0"	"195.7"	"100.000"	"37.4711"	"10272"	"10272"	"10258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.8"	""	"247.8"	""	"218.8"	""	"361.6"	"8.9"	"395.0"	"374.1"	""	"389"	"25"	"32.000"	"25.000"	"0.0629389662728127"	""	"0.002035"	"0.01843"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGVQTDR"	"[K].fGVQTDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"526.28986"	"1051.57244"	"1051.57337"	"-0.89"	"-0.00047"	"6/56"	"6"	"56"	"3286794.70831299"	"HCD"	"MS2"	"23.16708"	"203.9"	"100.000"	"37.5450"	"10266"	"10266"	"10248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.9"	""	"231.1"	""	"241.3"	""	"396.6"	"3.7"	"421.2"	"389.3"	""	"394"	"22"	"32.000"	"25.000"	"0.111036618197713"	"24"	"0.002286"	"0.02157"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQYAR"	"[R].tIAQYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.30859"	"1051.60991"	"1051.60976"	"0.14"	"0.00008"	"5/54"	"5"	"54"	"10178147.7577515"	"HCD"	"MS2"	"3.775706"	"574.3"	"100.000"	"37.1134"	"10090"	"10090"	"10068"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"809.7"	""	"684.2"	""	"670.5"	""	"626.4"	""	"911.7"	"1765.1"	""	"306"	"28"	"31.000"	"24.000"	"0.0218620775652199"	"15"	"0.003043"	"0.03273"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAQYAR"	"[R].tIAQYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.30865"	"1051.61003"	"1051.60976"	"0.26"	"0.00014"	"5/54"	"5"	"54"	"9271769.17370605"	"HCD"	"MS2"	"1.854256"	"520.5"	"100.000"	"37.0381"	"10097"	"10097"	"10074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"712.9"	""	"592.4"	""	"602.7"	""	"587.3"	""	"800.2"	"1650.0"	""	"306"	"28"	"31.000"	"24.000"	"0.0222173077490925"	"14"	"0.002525"	"0.02492"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDMAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"526.79083"	"1052.57439"	"1052.57602"	"-1.55"	"-0.00081"	"5/48"	"5"	"48"	"464885.868774414"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"79.4532"	"27299"	"27299"	"27274"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"38.8"	""	"33.8"	""	"40.5"	""	"57.4"	"54.1"	""	"402"	"17"	"33.000"	"26.000"	"0.403827655334355"	"19"	"0.002559"	"0.02607"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"526.79980"	"1052.59233"	"1052.59378"	"-1.37"	"-0.00072"	"5/52"	"5"	"52"	"7559595.04382324"	"HCD"	"MS2"	"13.08568"	"325.1"	"100.000"	"63.9218"	"20973"	"20973"	"20958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"415.2"	""	"401.3"	""	"400.8"	""	"598.1"	""	"617.6"	"654.0"	""	"337"	"26"	"32.000"	"25.000"	"0.038512339836876"	""	"0.002328"	"0.02206"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"526.79999"	"1052.59270"	"1052.59378"	"-1.02"	"-0.00054"	"4/52"	"4"	"52"	"9409324.65698242"	"HCD"	"MS2"	"5.135712"	"400.1"	"100.000"	"63.9022"	"20997"	"20997"	"20979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"501.9"	""	"501.6"	""	"506.9"	""	"737.9"	""	"750.2"	"800.9"	""	"337"	"25"	"32.000"	"25.000"	"0.0487079560178583"	""	"0.002755"	"0.02908"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSFER"	"[K].aLTSFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"526.80023"	"1052.59319"	"1052.59378"	"-0.56"	"-0.00029"	"6/54"	"6"	"54"	"4927945.56237793"	"HCD"	"MS2"	"0"	"227.7"	"100.000"	"50.6692"	"15592"	"15592"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"320.6"	""	"303.7"	""	"316.9"	""	"404.0"	""	"405.3"	"411.9"	""	"335"	"20"	"32.000"	"25.000"	"0.16482186021499"	"21"	"0.002628"	"0.02786"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"526.80029"	"1052.59331"	"1052.59378"	"-0.44"	"-0.00023"	"5/52"	"5"	"52"	"2020279.65258789"	"HCD"	"MS2"	"34.3684"	"106.1"	"100.000"	"65.3551"	"21554"	"21554"	"21535"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.3"	""	"131.9"	""	"119.1"	""	"186.9"	"0.7"	"204.0"	"234.1"	""	"335"	"12"	"32.000"	"25.000"	"1.0864626761933"	"24"	"0.008967"	"0.1162"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"526.80048"	"1052.59368"	"1052.59378"	"-0.10"	"-0.00005"	"6/52"	"6"	"52"	"1091677.47888184"	"HCD"	"MS2"	"22.48548"	"57.2"	"100.000"	"65.7502"	"21749"	"21749"	"21725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.7"	""	"67.5"	""	"72.3"	""	"92.3"	"1.3"	"116.4"	"117.3"	""	"335"	"14"	"32.000"	"25.000"	"0.732849526140072"	"19"	"0.00511"	"0.06506"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIYTR"	"[R].gVDIYTR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"526.80054"	"1052.59380"	"1052.59378"	"0.02"	"0.00001"	"6/54"	"6"	"54"	"2848480.00250244"	"HCD"	"MS2"	"5.513266"	"168.9"	"100.000"	"44.3177"	"13015"	"13015"	"12993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"215.9"	""	"222.0"	""	"240.8"	""	"267.3"	"0.9"	"331.6"	"322.8"	""	"333"	"24"	"32.000"	"25.000"	"0.0628657697890817"	"22"	"0.002559"	"0.02611"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSFER"	"[K].aLTSFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"526.80060"	"1052.59392"	"1052.59378"	"0.14"	"0.00007"	"5/54"	"5"	"54"	"5928799.22528076"	"HCD"	"MS2"	"0"	"263.1"	"100.000"	"50.3437"	"15494"	"15494"	"15476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"367.6"	""	"324.7"	""	"365.1"	""	"452.5"	""	"496.3"	"487.7"	""	"333"	"23"	"32.000"	"25.000"	"0.0844139529277382"	"21"	"0.002525"	"0.02359"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.80072"	"1052.59416"	"1052.59378"	"0.37"	"0.00019"	"4/52"	"4"	"52"	"709584.146118164"	"HCD"	"MS2"	"100"	"35.2"	"100.000"	"77.1060"	"26320"	"26320"	"26305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"43.1"	""	"59.1"	""	"56.9"	"1.3"	"61.7"	"64.0"	""	"333"	"5"	"32.000"	"25.000"	"5.16909171423371"	"13"	"0.006157"	"0.07511"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSFER"	"[K].aLTSFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"526.80078"	"1052.59429"	"1052.59378"	"0.48"	"0.00026"	"6/54"	"6"	"54"	"2932380.56835938"	"HCD"	"MS2"	"17.12134"	"149.5"	"100.000"	"50.0562"	"15377"	"15377"	"15355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.9"	""	"209.6"	""	"195.8"	""	"251.2"	""	"274.3"	"275.2"	""	"333"	"20"	"32.000"	"25.000"	"0.169205407362971"	"20"	"0.002286"	"0.02177"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIYTR"	"[R].gVDIYTR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"526.80084"	"1052.59441"	"1052.59378"	"0.60"	"0.00032"	"6/54"	"6"	"54"	"2905799.68011475"	"HCD"	"MS2"	"5.843581"	"172.5"	"100.000"	"44.1369"	"12977"	"12977"	"12954"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.1"	""	"220.0"	""	"248.1"	""	"274.2"	"4.6"	"321.9"	"332.6"	""	"333"	"21"	"32.000"	"25.000"	"0.137852370258103"	"17"	"0.004314"	"0.05062"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"526.80090"	"1052.59453"	"1052.59378"	"0.72"	"0.00038"	"6/52"	"6"	"52"	"1669812.50274658"	"HCD"	"MS2"	"0"	"88.3"	"100.000"	"55.8859"	"17714"	"17714"	"17701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.2"	""	"104.2"	""	"118.6"	""	"153.3"	""	"168.8"	"183.2"	""	"310"	"12"	"31.000"	"24.000"	"0.936120375533389"	"17"	"0.00329"	"0.03533"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSFER"	"[K].aLTSFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"526.80103"	"1052.59477"	"1052.59378"	"0.95"	"0.00050"	"5/54"	"5"	"54"	"2761077.49511719"	"HCD"	"MS2"	"22.12947"	"141.4"	"100.000"	"50.3562"	"15464"	"15464"	"15446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.5"	""	"197.1"	""	"190.9"	""	"242.4"	""	"250.1"	"257.1"	""	"312"	"25"	"31.000"	"24.000"	"0.0527381144481331"	"21"	"0.001951"	"0.01649"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGYIR"	"[R].dLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697; Q05820"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2; Putative lysozyme C-2 OS=Rattus norvegicus OX=10116 GN=Lyz2 PE=5 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"526.80133"	"1052.59538"	"1052.59378"	"1.53"	"0.00080"	"4/52"	"4"	"52"	"180930618.054688"	"HCD"	"MS2"	"0.0622189"	"512.3"	"6.998"	"64.2039"	"21086"	"21086"	"21077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"646.4"	""	"618.7"	""	"626.6"	""	"905.6"	""	"975.4"	"1093.3"	""	"320"	"29"	"32.000"	"25.000"	"0.0219846716002002"	""	"0.00714"	"0.0914"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSYQR"	"[K].aLSSYQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"527.29669"	"1053.58611"	"1053.58902"	"-2.77"	"-0.00146"	"6/52"	"6"	"52"	"1439892.94836426"	"HCD"	"MS2"	"25.27116"	"89.0"	"100.000"	"30.5602"	"7485"	"7485"	"7477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.7"	""	"145.3"	""	"126.2"	""	"137.6"	""	"148.8"	"143.1"	""	"288"	"16"	"31.000"	"24.000"	"0.329126227686062"	"19"	"0.00212"	"0.01898"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSYQR"	"[K].aLSSYQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"527.29681"	"1053.58635"	"1053.58902"	"-2.54"	"-0.00134"	"5/52"	"5"	"52"	"2336056.49157715"	"HCD"	"MS2"	"37.70752"	"130.5"	"100.000"	"30.7282"	"7514"	"7514"	"7500"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.1"	""	"220.6"	""	"175.2"	""	"181.1"	""	"214.4"	"210.5"	""	"288"	"18"	"31.000"	"24.000"	"0.236244927340734"	"18"	"0.002525"	"0.02523"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSYQR"	"[K].aLSSYQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"527.29755"	"1053.58782"	"1053.58902"	"-1.15"	"-0.00060"	"5/52"	"5"	"52"	"12193154.2931519"	"HCD"	"MS2"	"0"	"518.3"	"100.000"	"30.8489"	"7597"	"7597"	"7583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1001.6"	""	"920.8"	""	"739.4"	""	"706.8"	""	"800.3"	"730.4"	""	"292"	"22"	"31.000"	"24.000"	"0.0931864689838201"	"17"	"0.0065"	"0.08079"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSYQR"	"[K].aLSSYQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"527.29773"	"1053.58818"	"1053.58902"	"-0.80"	"-0.00042"	"5/52"	"5"	"52"	"10400308.99646"	"HCD"	"MS2"	"0"	"445.7"	"100.000"	"31.0151"	"7626"	"7626"	"7610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"845.0"	""	"800.8"	""	"661.1"	""	"596.6"	""	"683.3"	"620.7"	""	"300"	"22"	"31.000"	"24.000"	"0.0964031575975529"	"17"	"0.004234"	"0.04778"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSALHR"	"[R].qLSALHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"351.88342"	"1053.63572"	"1053.63664"	"-0.88"	"-0.00031"	"6/60"	"6"	"60"	"7692275.65289307"	"HCD"	"MS2"	"11.79777"	"216.4"	"100.000"	"27.7813"	"6367"	"6367"	"6348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"281.3"	""	"306.0"	""	"316.1"	""	"348.6"	"5.8"	"411.9"	"381.7"	""	"156"	"46"	"28.000"	"21.000"	"0.000188840265645422"	"19"	"0.0001991"	"0.00526"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSALHR"	"[R].qLSALHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"351.88351"	"1053.63599"	"1053.63664"	"-0.62"	"-0.00022"	"6/60"	"6"	"60"	"7213815.05462646"	"HCD"	"MS2"	"12.20669"	"189.8"	"100.000"	"28.0046"	"6416"	"6416"	"6402"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.6"	""	"258.4"	""	"284.9"	""	"309.6"	"7.0"	"360.2"	"337.0"	""	"156"	"38"	"28.000"	"21.000"	"0.00137750950013521"	"15"	"0.001348"	"0.01058"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSALHR"	"[R].qLSALHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.32166"	"1053.63603"	"1053.63664"	"-0.58"	"-0.00030"	"6/60"	"6"	"60"	"1088686.05517578"	"HCD"	"MS2"	"38.34589"	"81.4"	"100.000"	"27.8132"	"6380"	"6380"	"6363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.8"	""	"91.5"	"2.8"	"104.7"	""	"138.9"	""	"161.6"	"159.5"	""	"156"	"12"	"28.000"	"21.000"	"0.509441831065029"	"13"	"0.007912"	"0.1004"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSALHR"	"[R].qLSALHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.32166"	"1053.63603"	"1053.63664"	"-0.58"	"-0.00030"	"4/60"	"4"	"60"	"1044832.953125"	"HCD"	"MS2"	"37.12762"	"76.9"	"100.000"	"28.0298"	"6426"	"6426"	"6414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.3"	""	"85.5"	""	"98.2"	""	"129.8"	"0.2"	"163.3"	"147.7"	""	"156"	"15"	"28.000"	"21.000"	"0.25240305240511"	"13"	"0.004213"	"0.04604"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIYETR"	"[R].sGIYETR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"527.78955"	"1054.57182"	"1054.57304"	"-1.15"	"-0.00061"	"4/58"	"4"	"58"	"3419410.20568848"	"HCD"	"MS2"	"0"	"203.2"	"100.000"	"29.5863"	"7056"	"7056"	"7031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"285.1"	""	"271.7"	""	"254.8"	""	"306.9"	""	"407.9"	"402.4"	""	"327"	"25"	"32.000"	"25.000"	"0.0499479602010737"	""	"0.002084"	"0.01884"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGIYETR"	"[R].sGIYETR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"527.78979"	"1054.57231"	"1054.57304"	"-0.69"	"-0.00036"	"5/58"	"5"	"58"	"3408885.63665771"	"HCD"	"MS2"	"24.4671"	"209.2"	"100.000"	"29.4085"	"7024"	"7024"	"7000"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.1"	""	"262.2"	""	"276.0"	""	"316.4"	"2.5"	"404.3"	"426.2"	""	"334"	"22"	"32.000"	"25.000"	"0.103208738823116"	"24"	"0.002084"	"0.01876"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDFTDR"	"[R].sSDFTDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"528.76086"	"1056.51445"	"1056.51592"	"-1.39"	"-0.00073"	"6/58"	"6"	"58"	"1369265.4876709"	"HCD"	"MS2"	"45.80898"	"106.8"	"100.000"	"27.7245"	"6305"	"6305"	"6287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.8"	""	"128.4"	""	"121.1"	""	"188.8"	"2.9"	"205.0"	"222.7"	""	"218"	"15"	"30.000"	"23.000"	"0.337618703614607"	"20"	"0.001951"	"0.01717"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDFTDR"	"[R].sSDFTDR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"528.76154"	"1056.51579"	"1056.51592"	"-0.12"	"-0.00006"	"6/58"	"6"	"58"	"1464609.11578369"	"HCD"	"MS2"	"0"	"107.6"	"100.000"	"27.5332"	"6267"	"6267"	"6245"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.1"	"2.8"	"112.6"	""	"119.3"	""	"189.4"	"1.5"	"224.0"	"233.1"	""	"240"	"25"	"30.000"	"23.000"	"0.0352517958235384"	"20"	"0.0005161"	"0.006882"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLPNNR"	"[R].dVLPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"528.80249"	"1056.59770"	"1056.59992"	"-2.10"	"-0.00111"	"5/52"	"5"	"52"	"851136.215209961"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"32.9174"	"8429"	"8429"	"8404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.0"	""	"85.5"	""	"98.3"	""	"97.3"	""	"118.7"	"113.3"	""	"317"	"13"	"32.000"	"25.000"	"0.787098829498784"	"19"	"0.006997"	"0.08852"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEQLLK"	"[K].VPEqLLk.[L]"	"Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"528.82813"	"1056.64897"	"1056.65023"	"-1.19"	"-0.00063"	"4/54"	"4"	"54"	"984871.258483887"	"HCD"	"MS2"	"30.70477"	"30.9"	"100.000"	"108.5613"	"38980"	"38980"	"38970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"43.9"	""	"47.3"	""	"48.6"	""	"57.3"	"58.6"	""	"239"	"25"	"30.000"	"23.000"	"0.0392073875270177"	""	"0.00714"	"0.09119"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"528.82849"	"1056.64971"	"1056.65023"	"-0.49"	"-0.00026"	"7/58"	"7"	"58"	"1126341.46484375"	"HCD"	"MS2"	"39.86478"	"47.7"	"100.000"	"99.1847"	"35233"	"35233"	"35210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.2"	""	"74.1"	""	"73.8"	""	"82.9"	""	"82.4"	"73.1"	""	"239"	"29"	"30.000"	"23.000"	"0.0152183618181491"	""	"0.008135"	"0.104"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"528.82855"	"1056.64983"	"1056.65023"	"-0.38"	"-0.00020"	"5/58"	"5"	"58"	"10493703.355957"	"HCD"	"MS2"	"0.4827321"	"303.8"	"98.271"	"99.5297"	"35402"	"35402"	"35385"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"438.7"	""	"462.2"	""	"561.3"	""	"480.6"	""	"486.7"	"443.0"	""	"239"	"36"	"30.000"	"23.000"	"0.0032536280631531"	""	"0.004819"	"0.05829"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"528.82861"	"1056.64995"	"1056.65023"	"-0.26"	"-0.00014"	"5/58"	"5"	"58"	"1582893.6494751"	"HCD"	"MS2"	"19.98975"	"60.9"	"100.000"	"99.2343"	"35283"	"35283"	"35266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.4"	""	"98.3"	""	"100.7"	""	"99.2"	""	"95.7"	"98.8"	""	"239"	"29"	"30.000"	"23.000"	"0.0148377450757293"	""	"0.006267"	"0.07684"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEQLLK"	"[K].VPEqLLk.[L]"	"Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"528.82867"	"1056.65007"	"1056.65023"	"-0.15"	"-0.00008"	"4/54"	"4"	"54"	"923576.675109863"	"HCD"	"MS2"	"31.51683"	"26.4"	"100.000"	"108.2889"	"38861"	"38861"	"38854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.2"	""	"38.2"	""	"40.4"	""	"39.0"	""	"44.5"	"55.6"	""	"239"	"25"	"30.000"	"23.000"	"0.0395701690171696"	""	"0.0065"	"0.0807"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVIPEK"	"[M].sLVIPEk.[F]"	"N-Term(Prot)(Acetyl); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"528.82898"	"1056.65068"	"1056.65023"	"0.43"	"0.00023"	"5/58"	"5"	"58"	"10325496.5530396"	"HCD"	"MS2"	"0.3455069"	"320.4"	"100.000"	"99.4778"	"35352"	"35352"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"475.5"	""	"497.9"	""	"539.7"	""	"517.0"	""	"524.3"	"477.1"	""	"233"	"38"	"30.000"	"23.000"	"0.00173510565553321"	""	"0.007069"	"0.08925"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"529.31299"	"1057.61870"	"1057.62032"	"-1.54"	"-0.00081"	"5/62"	"5"	"62"	"4363289.56506348"	"HCD"	"MS2"	"28.55951"	"166.1"	"100.000"	"45.1156"	"13339"	"13339"	"13318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.7"	""	"168.3"	""	"225.9"	""	"293.2"	""	"325.6"	"324.8"	""	"434"	"26"	"33.000"	"26.000"	"0.0605982013548503"	"25"	"0.002711"	"0.02884"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"529.31323"	"1057.61919"	"1057.62032"	"-1.07"	"-0.00057"	"5/62"	"5"	"62"	"5840563.44989014"	"HCD"	"MS2"	"18.39821"	"214.2"	"100.000"	"44.9120"	"13290"	"13290"	"13267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"308.8"	""	"245.4"	""	"288.6"	""	"368.5"	""	"419.3"	"401.9"	""	"434"	"32"	"33.000"	"26.000"	"0.0124010864157795"	""	"0.002373"	"0.02253"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQPLDR"	"[K].vTQPLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"529.31335"	"1057.61943"	"1057.62032"	"-0.84"	"-0.00045"	"6/64"	"6"	"64"	"1929767.38330078"	"HCD"	"MS2"	"8.910353"	"98.1"	"100.000"	"34.4192"	"9038"	"9038"	"9016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.7"	""	"119.7"	""	"136.8"	""	"162.3"	"0.8"	"172.4"	"199.7"	""	"439"	"26"	"33.000"	"26.000"	"0.0525332808530982"	""	"0.002799"	"0.02961"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"529.31342"	"1057.61955"	"1057.62032"	"-0.73"	"-0.00039"	"5/62"	"5"	"62"	"17829038.4746094"	"HCD"	"MS2"	"0.6518568"	"358.3"	"57.889"	"45.3939"	"13453"	"13453"	"13440"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.5"	""	"376.9"	""	"464.9"	""	"613.5"	""	"709.2"	"753.9"	""	"439"	"33"	"33.000"	"26.000"	"0.0118695573886555"	""	"0.003661"	"0.04003"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQSLPR"	"[K].dIQSLPR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"529.31384"	"1057.62041"	"1057.62032"	"0.08"	"0.00004"	"5/62"	"5"	"62"	"15069631.7039795"	"HCD"	"MS2"	"1.031569"	"395.3"	"73.446"	"45.1970"	"13406"	"13406"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"525.1"	""	"402.0"	""	"534.9"	""	"697.0"	""	"784.6"	"816.3"	""	"431"	"31"	"33.000"	"26.000"	"0.0186400586496162"	""	"0.003317"	"0.03695"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQPLDR"	"[K].vTQPLDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"529.31409"	"1057.62090"	"1057.62032"	"0.54"	"0.00029"	"9/64"	"9"	"64"	"2650617.777771"	"HCD"	"MS2"	"29.84659"	"137.0"	"100.000"	"34.4652"	"9021"	"9021"	"8997"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"185.8"	""	"175.9"	""	"201.6"	""	"234.6"	""	"259.8"	"241.9"	""	"431"	"26"	"33.000"	"26.000"	"0.048690840848262"	""	"0.003749"	"0.0403"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAQDIR"	"[K].lLAQDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3421"	"0.0000"	"1"	"1"	"1"	"529.33154"	"1057.65581"	"1057.65671"	"-0.85"	"-0.00045"	"5/54"	"5"	"54"	"5510563.43988037"	"HCD"	"MS2"	"13.7091"	"201.9"	"100.000"	"58.8278"	"18904"	"18904"	"18885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"312.5"	""	"288.1"	""	"291.5"	""	"287.1"	""	"378.8"	"357.2"	""	"342"	"38"	"32.000"	"25.000"	"0.00242100736372661"	""	"0.0005161"	"0.006775"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAQDIR"	"[K].lLAQDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"529.33173"	"1057.65618"	"1057.65671"	"-0.51"	"-0.00027"	"5/54"	"5"	"54"	"6019730.66168213"	"HCD"	"MS2"	"1.171756"	"218.4"	"100.000"	"59.1224"	"19024"	"19024"	"19006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"307.7"	""	"316.9"	""	"344.0"	""	"302.3"	""	"418.0"	"382.3"	""	"342"	"42"	"32.000"	"25.000"	"0.00116679916698225"	""	"0.001348"	"0.01109"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAQDIR"	"[K].lLAQDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"529.33173"	"1057.65618"	"1057.65671"	"-0.51"	"-0.00027"	"5/54"	"5"	"54"	"6593392.00683594"	"HCD"	"MS2"	"0"	"227.5"	"100.000"	"58.8716"	"18958"	"18958"	"18942"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"333.9"	""	"346.8"	""	"346.0"	""	"330.2"	""	"416.5"	"383.0"	""	"342"	"42"	"32.000"	"25.000"	"0.00115344292736345"	""	"0.001049"	"0.008591"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAQDIR"	"[K].lLAQDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3590"	"0.0000"	"1"	"1"	"1"	"529.33197"	"1057.65666"	"1057.65671"	"-0.04"	"-0.00002"	"5/54"	"5"	"54"	"4786895.17303467"	"HCD"	"MS2"	"11.71904"	"177.8"	"100.000"	"58.5882"	"18842"	"18842"	"18827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.2"	""	"245.0"	""	"273.4"	""	"254.1"	""	"346.9"	"303.4"	""	"342"	"39"	"32.000"	"25.000"	"0.0024098838453014"	""	"0.001261"	"0.01024"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNPSDR"	"[K].lQNPSDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"529.79309"	"1058.57891"	"1058.57919"	"-0.27"	"-0.00014"	"5/60"	"5"	"60"	"2447163.34655762"	"HCD"	"MS2"	"53.89125"	"144.2"	"100.000"	"25.7543"	"5573"	"5573"	"5550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.4"	""	"130.7"	""	"133.3"	""	"277.8"	"0.9"	"341.4"	"316.9"	""	"497"	"14"	"33.000"	"26.000"	"1.04310107521765"	"21"	"0.002755"	"0.02927"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNPSDR"	"[K].lQNPSDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"529.79321"	"1058.57915"	"1058.57919"	"-0.04"	"-0.00002"	"6/60"	"6"	"60"	"2623628.70819092"	"HCD"	"MS2"	"62.07906"	"149.6"	"100.000"	"25.8806"	"5585"	"5585"	"5557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.1"	""	"145.2"	""	"139.3"	""	"294.5"	"0.2"	"349.7"	"318.3"	""	"497"	"15"	"33.000"	"26.000"	"0.72498061297929"	"25"	"0.006613"	"0.08271"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPTLDDR"	"[R].lPTLDDR.[TS]"	"N-Term(TMT6plex)"	"2"	"2"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"529.80554"	"1058.60381"	"1058.60434"	"-0.50"	"-0.00027"	"5/54"	"5"	"54"	"3296040.67889404"	"HCD"	"MS2"	"9.07419"	"102.0"	"100.000"	"61.8937"	"20181"	"20181"	"20161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.6"	""	"138.8"	""	"138.5"	""	"154.6"	"0.2"	"188.3"	"208.8"	""	"521"	"17"	"34.000"	"27.000"	"0.512634378468634"	"25"	"0.002559"	"0.02544"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPTLDDR"	"[R].lPTLDDR.[TS]"	"N-Term(TMT6plex)"	"2"	"2"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"529.80627"	"1058.60527"	"1058.60434"	"0.88"	"0.00047"	"6/54"	"6"	"54"	"2709732.88232422"	"HCD"	"MS2"	"9.343042"	"88.4"	"100.000"	"62.0253"	"20201"	"20201"	"20183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.6"	"2.6"	"116.4"	""	"116.9"	""	"140.7"	""	"171.5"	"174.2"	""	"445"	"15"	"33.000"	"26.000"	"0.787644083910643"	"19"	"0.00511"	"0.06449"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVADALNR"	"[R].aVADALNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63560"	"Microtubule-associated protein 6 OS=Rattus norvegicus OX=10116 GN=Map6 PE=1 SV=1"	"Q63560"	"Microtubule-associated protein 6 OS=Rattus norvegicus OX=10116 GN=Map6 PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"3"	"529.81049"	"1058.61370"	"1058.61557"	"-1.77"	"-0.00094"	"6/58"	"6"	"58"	"1472584.42468262"	"HCD"	"MS2"	"20.92521"	"109.5"	"100.000"	"39.6557"	"11123"	"11123"	"11101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.3"	""	"133.9"	""	"151.3"	""	"188.3"	"4.1"	"204.0"	"212.3"	""	"522"	"11"	"34.000"	"27.000"	"2.11660836099852"	"22"	"0.003357"	"0.03751"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLQQR"	"[R].lDGLQQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"529.81091"	"1058.61455"	"1058.61557"	"-0.97"	"-0.00051"	"6/52"	"6"	"52"	"5529497.26696777"	"HCD"	"MS2"	"62.97898"	"249.9"	"100.000"	"41.7863"	"11983"	"11983"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"360.2"	""	"324.0"	""	"338.3"	""	"420.8"	"3.7"	"465.9"	"454.5"	""	"509"	"15"	"34.000"	"27.000"	"0.821651753975865"	"19"	"0.004213"	"0.04636"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTQLGPGR"	"[R].tTQLGPGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"Q6TUG0"	"DnaJ homolog subfamily B member 11 OS=Rattus norvegicus OX=10116 GN=Dnajb11 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"529.81104"	"1058.61479"	"1058.61557"	"-0.74"	"-0.00039"	"6/68"	"6"	"68"	"2598614.53741455"	"HCD"	"MS2"	"0"	"135.1"	"100.000"	"26.8611"	"5965"	"5965"	"5962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.6"	""	"165.8"	""	"169.1"	""	"249.4"	"9.0"	"253.1"	"264.5"	""	"510"	"16"	"34.000"	"27.000"	"0.670718337933322"	"21"	"0.004213"	"0.04676"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLQQR"	"[R].lDGLQQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"529.81122"	"1058.61516"	"1058.61557"	"-0.39"	"-0.00021"	"6/52"	"6"	"52"	"5491409.06231689"	"HCD"	"MS2"	"12.59761"	"237.6"	"100.000"	"42.0924"	"12107"	"12107"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.5"	""	"299.2"	""	"319.2"	""	"386.0"	"7.7"	"461.3"	"465.2"	""	"510"	"14"	"34.000"	"27.000"	"0.978453476005311"	"22"	"0.00511"	"0.06448"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGLQQR"	"[R].lDGLQQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"529.81134"	"1058.61540"	"1058.61557"	"-0.16"	"-0.00008"	"5/52"	"5"	"52"	"8513207.99938965"	"HCD"	"MS2"	"34.83463"	"346.1"	"100.000"	"41.7652"	"12008"	"12008"	"11987"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"506.8"	""	"444.5"	""	"472.6"	""	"561.3"	"9.1"	"651.9"	"633.8"	""	"510"	"18"	"34.000"	"27.000"	"0.443139211331091"	"22"	"0.004392"	"0.05146"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLIER"	"[R].iEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"529.82269"	"1058.63811"	"1058.64073"	"-2.47"	"-0.00131"	"4/56"	"4"	"56"	"19646832.477417"	"HCD"	"MS2"	"45.33624"	"251.2"	"34.275"	"88.3087"	"30840"	"30840"	"30828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"404.6"	""	"356.5"	""	"307.2"	""	"402.5"	""	"456.1"	"456.8"	""	"486"	"22"	"33.000"	"26.000"	"0.171240415759017"	""	"0.009084"	"0.1172"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLIER"	"[R].iEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"529.82275"	"1058.63823"	"1058.64073"	"-2.36"	"-0.00125"	"4/56"	"4"	"56"	"17976991.7548828"	"HCD"	"MS2"	"47.29586"	"334.1"	"49.569"	"88.2356"	"30849"	"30849"	"30831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"519.7"	""	"485.5"	""	"416.5"	""	"548.2"	""	"592.7"	"605.9"	""	"487"	"20"	"33.000"	"26.000"	"0.263936203564163"	""	"0.009713"	"0.129"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLIER"	"[R].iEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"529.82349"	"1058.63970"	"1058.64073"	"-0.97"	"-0.00051"	"5/56"	"5"	"56"	"955485.22479248"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"75.5494"	"25721"	"25721"	"25697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.0"	""	"67.4"	""	"67.5"	""	"69.9"	"0.5"	"92.9"	"82.2"	""	"487"	"26"	"33.000"	"26.000"	"0.061446756809902"	""	"0.001348"	"0.01082"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"529.82367"	"1058.64006"	"1058.64073"	"-0.63"	"-0.00033"	"5/54"	"5"	"54"	"1020692.38793945"	"HCD"	"MS2"	"11.62669"	"44.7"	"100.000"	"89.1731"	"31188"	"31188"	"31182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.3"	""	"60.0"	""	"61.0"	""	"75.5"	""	"87.5"	"77.5"	""	"487"	"23"	"33.000"	"26.000"	"0.116546427480563"	""	"0.001615"	"0.01435"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"529.82373"	"1058.64018"	"1058.64073"	"-0.51"	"-0.00027"	"5/54"	"5"	"54"	"8670120.26922607"	"HCD"	"MS2"	"1.255508"	"306.5"	"93.078"	"88.8870"	"31074"	"31074"	"31057"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"432.5"	""	"427.5"	""	"467.4"	""	"466.2"	""	"529.7"	"587.4"	""	"487"	"36"	"33.000"	"26.000"	"0.00562987776407758"	""	"0.002189"	"0.02025"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"529.82373"	"1058.64018"	"1058.64073"	"-0.51"	"-0.00027"	"5/54"	"5"	"54"	"30934320.5671387"	"HCD"	"MS2"	"4.574119"	"406.1"	"33.219"	"88.5873"	"30952"	"30952"	"30940"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"580.4"	"2.8"	"585.6"	""	"587.3"	""	"650.6"	""	"674.9"	"765.0"	""	"487"	"34"	"33.000"	"26.000"	"0.0106782224908209"	""	"0.003357"	"0.03793"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IEGLIER"	"[R].iEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"5"	"529.82391"	"1058.64055"	"1058.64073"	"-0.17"	"-0.00009"	"4/56"	"4"	"56"	"528543.278991699"	"HCD"	"MS2"	"36.03908"	"27.5"	"100.000"	"89.4033"	"31320"	"31320"	"31302"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"34.5"	""	"30.1"	""	"53.2"	"1.5"	"56.8"	"54.4"	""	"487"	"6"	"33.000"	"26.000"	"5.60401082538972"	"19"	"0.009046"	"0.1166"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"6"	"529.82391"	"1058.64055"	"1058.64073"	"-0.17"	"-0.00009"	"4/54"	"4"	"54"	"528543.278991699"	"HCD"	"MS2"	"36.03908"	"27.5"	"100.000"	"89.4033"	"31320"	"31320"	"31302"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"34.5"	""	"30.1"	""	"53.2"	"1.5"	"56.8"	"54.4"	""	"487"	"6"	"33.000"	"26.000"	"5.60401082538972"	"19"	"0.00981"	"0.1325"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"529.82391"	"1058.64055"	"1058.64073"	"-0.17"	"-0.00009"	"5/54"	"5"	"54"	"938187.242553711"	"HCD"	"MS2"	"15.42698"	"43.6"	"100.000"	"89.1075"	"31202"	"31202"	"31186"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"55.7"	""	"63.7"	""	"71.1"	"1.1"	"78.9"	"83.0"	""	"487"	"17"	"33.000"	"26.000"	"0.436012525457595"	""	"0.00511"	"0.06529"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"529.82397"	"1058.64067"	"1058.64073"	"-0.05"	"-0.00003"	"5/54"	"5"	"54"	"7186293.95843506"	"HCD"	"MS2"	"1.230884"	"289.1"	"100.000"	"88.8167"	"31085"	"31085"	"31068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.5"	""	"386.2"	""	"456.3"	""	"435.2"	""	"494.8"	"570.0"	""	"487"	"36"	"33.000"	"26.000"	"0.0056689022124143"	""	"0.001488"	"0.01253"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLIER"	"[R].lADLIER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"529.82404"	"1058.64079"	"1058.64073"	"0.07"	"0.00003"	"5/54"	"5"	"54"	"31177398.6724854"	"HCD"	"MS2"	"2.867012"	"355.8"	"30.223"	"88.5168"	"30963"	"30963"	"30949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"513.8"	"2.3"	"473.7"	""	"540.0"	""	"542.2"	""	"612.3"	"689.1"	""	"471"	"36"	"33.000"	"26.000"	"0.00541989547999703"	""	"0.002559"	"0.02547"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGLIER"	"[R].iEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"529.82422"	"1058.64116"	"1058.64073"	"0.41"	"0.00022"	"5/56"	"5"	"56"	"850391.602539063"	"HCD"	"MS2"	"13.14148"	"41.4"	"100.000"	"75.4260"	"25640"	"25640"	"25615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.2"	""	"51.7"	""	"61.2"	""	"60.8"	""	"82.1"	"76.0"	""	"471"	"22"	"33.000"	"26.000"	"0.160321183972376"	"24"	"0.003529"	"0.03913"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGSGVILR"	"[R].qGSGVILR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"529.82892"	"1058.65056"	"1058.65196"	"-1.32"	"-0.00070"	"7/70"	"7"	"70"	"3650584.53411865"	"HCD"	"MS2"	"6.705627"	"194.2"	"100.000"	"36.0255"	"9651"	"9651"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.3"	""	"211.1"	""	"235.0"	""	"350.6"	"1.0"	"389.1"	"398.4"	""	"453"	"25"	"33.000"	"26.000"	"0.0714608547194353"	""	"0.000264"	"0.006074"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGSGVILR"	"[R].qGSGVILR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"Q63768"	"Adapter molecule crk OS=Rattus norvegicus OX=10116 GN=Crk PE=1 SV=1"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"529.82947"	"1058.65166"	"1058.65196"	"-0.28"	"-0.00015"	"5/70"	"5"	"70"	"3238637.22351074"	"HCD"	"MS2"	"12.1078"	"159.9"	"100.000"	"35.8766"	"9628"	"9628"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.2"	""	"178.6"	""	"191.8"	""	"292.3"	"0.3"	"335.3"	"332.2"	""	"436"	"28"	"33.000"	"26.000"	"0.0378840580667364"	""	"0.0001991"	"0.002676"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWPSGDR"	"[R].lWPSGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"1"	"530.29199"	"1059.57671"	"1059.57846"	"-1.65"	"-0.00088"	"6/52"	"6"	"52"	"2196273.48724365"	"HCD"	"MS2"	"18.26783"	"120.0"	"100.000"	"57.2359"	"18255"	"18255"	"18238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.2"	""	"160.8"	""	"174.9"	""	"168.1"	"0.4"	"208.6"	"235.5"	""	"460"	"15"	"33.000"	"26.000"	"0.754619174160174"	"23"	"0.002799"	"0.02959"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWPSGDR"	"[R].lWPSGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.1765"	"0.0000"	"1"	"1"	"1"	"530.29211"	"1059.57695"	"1059.57846"	"-1.42"	"-0.00075"	"6/52"	"6"	"52"	"2178155.24865723"	"HCD"	"MS2"	"14.3195"	"106.7"	"100.000"	"56.9754"	"18184"	"18184"	"18166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.7"	""	"153.6"	""	"156.3"	""	"158.2"	"2.1"	"195.5"	"187.3"	""	"470"	"17"	"33.000"	"26.000"	"0.464587865426287"	""	"0.003529"	"0.03847"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGDPVTR"	"[K].wGDPVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"530.29230"	"1059.57732"	"1059.57846"	"-1.08"	"-0.00057"	"9/54"	"9"	"54"	"1969503.99230957"	"HCD"	"MS2"	"26.62473"	"95.7"	"100.000"	"48.8786"	"14898"	"14898"	"14877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.1"	""	"117.9"	""	"129.6"	""	"166.6"	""	"171.4"	"194.1"	""	"470"	"17"	"33.000"	"26.000"	"0.465658851064198"	""	"0.007752"	"0.09903"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGDPVTR"	"[K].wGDPVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"530.29248"	"1059.57768"	"1059.57846"	"-0.73"	"-0.00039"	"8/54"	"8"	"54"	"1649517.53881836"	"HCD"	"MS2"	"35.66837"	"84.1"	"100.000"	"49.1446"	"14971"	"14971"	"14952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.5"	""	"93.5"	""	"109.9"	""	"140.7"	""	"172.6"	"165.4"	""	"473"	"18"	"33.000"	"26.000"	"0.373965161287445"	""	"0.004392"	"0.0515"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALADVVR"	"[K].sALADVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"530.32123"	"1059.63518"	"1059.63597"	"-0.75"	"-0.00040"	"12/64"	"12"	"64"	"2116562.16589355"	"HCD"	"MS2"	"4.879612"	"102.2"	"100.000"	"52.2199"	"16253"	"16253"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.7"	""	"109.2"	""	"130.6"	""	"186.9"	""	"218.8"	"195.4"	""	"576"	"37"	"34.000"	"27.000"	"0.00569367256352216"	"27"	"9.9E-05"	"0.0005519"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALADVVR"	"[K].sALADVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"530.32129"	"1059.63530"	"1059.63597"	"-0.64"	"-0.00034"	"7/64"	"7"	"64"	"2121465.67120361"	"HCD"	"MS2"	"1.507495"	"102.8"	"100.000"	"52.5190"	"16341"	"16341"	"16323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.2"	""	"121.3"	""	"153.0"	""	"171.2"	"1.1"	"183.2"	"204.6"	""	"576"	"32"	"34.000"	"27.000"	"0.0171550697336355"	"26"	"0.0001686"	"0.001865"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALADVVR"	"[K].sALADVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"530.32141"	"1059.63555"	"1059.63597"	"-0.40"	"-0.00021"	"7/64"	"7"	"64"	"4742093.32391357"	"HCD"	"MS2"	"12.29627"	"188.3"	"100.000"	"52.2055"	"16213"	"16213"	"16195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.8"	""	"214.3"	""	"250.7"	""	"353.1"	""	"369.8"	"364.6"	""	"576"	"46"	"34.000"	"27.000"	"0.000780535189984562"	"25"	"0"	"0.0003763"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALADVVR"	"[K].sALADVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"530.32153"	"1059.63579"	"1059.63597"	"-0.17"	"-0.00009"	"7/64"	"7"	"64"	"4856420.50463867"	"HCD"	"MS2"	"7.784763"	"192.2"	"100.000"	"51.9112"	"16127"	"16127"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.0"	"3.3"	"218.4"	""	"256.1"	""	"336.6"	""	"381.9"	"396.4"	""	"576"	"39"	"34.000"	"27.000"	"0.00404010346913844"	"24"	"0.0001686"	"0.00185"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"530.81268"	"1060.61809"	"1060.61999"	"-1.79"	"-0.00095"	"6/54"	"6"	"54"	"8581099.37017822"	"HCD"	"MS2"	"3.667273"	"341.9"	"100.000"	"61.6987"	"20103"	"20103"	"20086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"487.8"	""	"443.2"	""	"476.8"	""	"554.5"	""	"616.0"	"667.9"	""	"669"	"24"	"35.000"	"28.000"	"0.127760358595996"	""	"0.004213"	"0.04662"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"530.81293"	"1060.61858"	"1060.61999"	"-1.33"	"-0.00071"	"6/54"	"6"	"54"	"33575776.1589355"	"HCD"	"MS2"	"0.1069487"	"412.9"	"31.929"	"61.4178"	"19991"	"19991"	"19974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"578.8"	""	"502.1"	""	"573.7"	""	"702.1"	""	"766.6"	"792.8"	""	"667"	"25"	"35.000"	"28.000"	"0.116975749963181"	""	"0.005673"	"0.07076"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"530.81293"	"1060.61858"	"1060.61999"	"-1.33"	"-0.00071"	"6/54"	"6"	"54"	"22904511.2753296"	"HCD"	"MS2"	"0.7922938"	"462.4"	"51.787"	"61.1070"	"19865"	"19865"	"19848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"689.7"	""	"568.7"	""	"653.5"	""	"812.1"	""	"815.4"	"846.1"	""	"667"	"25"	"35.000"	"28.000"	"0.115903309841309"	""	"0.00714"	"0.09143"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"3"	"530.81305"	"1060.61882"	"1060.61999"	"-1.10"	"-0.00058"	"6/54"	"6"	"54"	"4741502.54077148"	"HCD"	"MS2"	"9.986127"	"220.3"	"100.000"	"61.8764"	"20141"	"20141"	"20127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.6"	""	"303.7"	""	"301.1"	""	"366.4"	""	"394.9"	"422.4"	""	"667"	"20"	"35.000"	"28.000"	"0.337361747995676"	"28"	"0.003904"	"0.04222"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"3"	"530.81305"	"1060.61882"	"1060.61999"	"-1.10"	"-0.00058"	"6/54"	"6"	"54"	"31732589.3686523"	"HCD"	"MS2"	"0.5422446"	"382.0"	"28.746"	"61.2635"	"19897"	"19897"	"19880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"564.2"	""	"478.2"	""	"543.6"	""	"648.1"	""	"669.0"	"718.6"	""	"667"	"23"	"35.000"	"28.000"	"0.155989669619281"	""	"0.006613"	"0.08259"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"3"	"530.81305"	"1060.61882"	"1060.61999"	"-1.10"	"-0.00058"	"6/54"	"6"	"54"	"24360097.0856934"	"HCD"	"MS2"	"0.677668"	"466.1"	"47.066"	"61.5800"	"20022"	"20022"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"646.3"	""	"590.6"	""	"680.1"	""	"754.3"	""	"857.2"	"893.4"	""	"667"	"24"	"35.000"	"28.000"	"0.118876452997652"	""	"0.004852"	"0.05985"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"530.81311"	"1060.61894"	"1060.61999"	"-0.99"	"-0.00052"	"5/54"	"5"	"54"	"2670875.02166748"	"HCD"	"MS2"	"13.27542"	"143.6"	"100.000"	"60.4944"	"19615"	"19615"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.7"	""	"165.4"	""	"181.7"	""	"245.8"	"8.0"	"280.6"	"280.5"	""	"675"	"37"	"35.000"	"28.000"	"0.00729917501757869"	""	"0.00307"	"0.03344"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"530.81317"	"1060.61907"	"1060.61999"	"-0.87"	"-0.00046"	"5/56"	"5"	"56"	"8202619.796875"	"HCD"	"MS2"	"14.90662"	"388.1"	"100.000"	"45.4248"	"13499"	"13499"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"576.0"	""	"570.2"	""	"666.3"	""	"609.9"	""	"634.5"	"615.1"	""	"675"	"39"	"35.000"	"28.000"	"0.00394706044469206"	""	"0.001872"	"0.01579"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"530.81329"	"1060.61931"	"1060.61999"	"-0.64"	"-0.00034"	"5/54"	"5"	"54"	"2045223.99658203"	"HCD"	"MS2"	"18.96353"	"108.1"	"100.000"	"60.0802"	"19414"	"19414"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.5"	""	"129.3"	""	"146.6"	""	"172.0"	"0.5"	"209.9"	"208.9"	""	"675"	"41"	"35.000"	"28.000"	"0.00268085779219445"	""	"0.0001991"	"0.004388"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"530.81329"	"1060.61931"	"1060.61999"	"-0.64"	"-0.00034"	"5/54"	"5"	"54"	"1646089.77758789"	"HCD"	"MS2"	"19.70087"	"87.7"	"100.000"	"59.8958"	"19372"	"19372"	"19353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.6"	""	"112.8"	""	"111.5"	""	"140.7"	"0.2"	"167.3"	"173.7"	""	"675"	"40"	"35.000"	"28.000"	"0.00342195092686129"	"26"	"0.001348"	"0.01052"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"530.81329"	"1060.61931"	"1060.61999"	"-0.64"	"-0.00034"	"5/54"	"5"	"54"	"4615871.43292236"	"HCD"	"MS2"	"3.439023"	"211.0"	"100.000"	"60.1998"	"19496"	"19496"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"290.0"	""	"226.3"	""	"265.3"	""	"363.5"	"7.9"	"432.7"	"417.5"	""	"675"	"41"	"35.000"	"28.000"	"0.00249616780332155"	""	"0.001049"	"0.008909"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"530.81335"	"1060.61943"	"1060.61999"	"-0.53"	"-0.00028"	"6/54"	"6"	"54"	"5038562.83013916"	"HCD"	"MS2"	"12.02731"	"207.7"	"100.000"	"60.9598"	"19773"	"19773"	"19757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"320.3"	""	"264.2"	""	"289.2"	""	"353.9"	""	"367.1"	"372.6"	""	"675"	"24"	"35.000"	"28.000"	"0.12338824216943"	""	"0.002755"	"0.02915"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"530.81342"	"1060.61955"	"1060.61999"	"-0.41"	"-0.00022"	"5/54"	"5"	"54"	"4856433.61730957"	"HCD"	"MS2"	"6.230881"	"223.9"	"100.000"	"60.3566"	"19526"	"19526"	"19512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.7"	""	"258.8"	""	"272.0"	""	"393.0"	"14.1"	"429.4"	"430.7"	""	"675"	"45"	"35.000"	"28.000"	"0.00104297470847334"	""	"0.001718"	"0.01507"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"530.81342"	"1060.61955"	"1060.61999"	"-0.41"	"-0.00022"	"5/56"	"5"	"56"	"3985514.64654541"	"HCD"	"MS2"	"29.03253"	"249.2"	"100.000"	"45.9759"	"13690"	"13690"	"13669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.4"	""	"340.7"	""	"390.6"	""	"419.1"	"10.5"	"443.0"	"396.4"	""	"675"	"26"	"35.000"	"28.000"	"0.0921030001697713"	""	"0.004819"	"0.05848"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTIAEER"	"[R].lTIAEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"530.81348"	"1060.61968"	"1060.61999"	"-0.30"	"-0.00016"	"5/56"	"5"	"56"	"6998747.13592529"	"HCD"	"MS2"	"13.4864"	"324.4"	"100.000"	"45.6610"	"13561"	"13561"	"13541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"502.2"	""	"491.9"	""	"530.9"	""	"485.2"	""	"553.2"	"505.7"	""	"675"	"36"	"35.000"	"28.000"	"0.00818980907090315"	""	"0.001951"	"0.01698"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDDIR"	"[R].lTVDDIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"530.81354"	"1060.61980"	"1060.61999"	"-0.18"	"-0.00010"	"4/54"	"4"	"54"	"2428480.45324707"	"HCD"	"MS2"	"19.83854"	"127.3"	"100.000"	"60.6581"	"19649"	"19649"	"19632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.7"	""	"157.3"	""	"158.8"	""	"203.3"	"4.5"	"262.2"	"248.5"	""	"675"	"25"	"35.000"	"28.000"	"0.101688953316281"	"27"	"0.004213"	"0.04692"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDEILR"	"[R].sVDEILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"3"	"530.81366"	"1060.62004"	"1060.61999"	"0.05"	"0.00003"	"6/54"	"6"	"54"	"3058690.32672119"	"HCD"	"MS2"	"21.4797"	"143.0"	"100.000"	"60.8190"	"19747"	"19747"	"19730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"219.3"	""	"188.6"	""	"195.1"	""	"241.9"	"4.8"	"247.8"	"256.3"	""	"660"	"23"	"35.000"	"28.000"	"0.173985854269531"	""	"0.003317"	"0.0367"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDILDLR"	"[R].sDILDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V885"	"Collectin-12 OS=Rattus norvegicus OX=10116 GN=Colec12 PE=2 SV=1"	"Q4V885"	"Collectin-12 OS=Rattus norvegicus OX=10116 GN=Colec12 PE=2 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"530.81372"	"1060.62016"	"1060.61999"	"0.16"	"0.00009"	"4/56"	"4"	"56"	"987976.622924805"	"HCD"	"MS2"	"10.86447"	"43.9"	"100.000"	"79.5575"	"27314"	"27314"	"27291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.5"	""	"39.1"	""	"39.0"	""	"81.0"	""	"107.5"	"114.6"	""	"654"	"21"	"35.000"	"28.000"	"0.237436648081296"	"25"	"0.002559"	"0.02551"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPLAFR"	"[K].vEPLAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"530.82104"	"1060.63481"	"1060.63525"	"-0.41"	"-0.00022"	"5/48"	"5"	"48"	"1620940.41583252"	"HCD"	"MS2"	"34.27507"	"75.1"	"100.000"	"72.9659"	"24670"	"24670"	"24648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.5"	""	"104.4"	""	"109.0"	""	"128.2"	""	"131.0"	"133.4"	""	"533"	"28"	"34.000"	"27.000"	"0.0425301792738589"	"22"	"0.001615"	"0.01411"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPLAFR"	"[K].vEPLAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"530.82111"	"1060.63494"	"1060.63525"	"-0.29"	"-0.00016"	"5/48"	"5"	"48"	"1313297.27282715"	"HCD"	"MS2"	"25.16339"	"61.7"	"100.000"	"73.1927"	"24733"	"24733"	"24714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.7"	""	"85.4"	""	"92.0"	""	"97.6"	""	"122.6"	"112.4"	""	"533"	"24"	"34.000"	"27.000"	"0.104639875283993"	"22"	"0.005152"	"0.06585"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPLAFR"	"[K].vEPLAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"530.82111"	"1060.63494"	"1060.63525"	"-0.29"	"-0.00016"	"6/48"	"6"	"48"	"1403936.49414063"	"HCD"	"MS2"	"28.02925"	"65.2"	"100.000"	"73.2608"	"24790"	"24790"	"24771"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"85.4"	""	"88.9"	""	"105.1"	""	"131.0"	"126.6"	""	"533"	"19"	"34.000"	"27.000"	"0.305982940128919"	"21"	"0.002189"	"0.02059"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPLAFR"	"[K].vEPLAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"530.82123"	"1060.63518"	"1060.63525"	"-0.06"	"-0.00003"	"5/48"	"5"	"48"	"1654653.84301758"	"HCD"	"MS2"	"32.64935"	"75.1"	"100.000"	"72.8839"	"24607"	"24607"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.3"	""	"103.8"	""	"110.3"	""	"120.0"	"0.0"	"137.2"	"135.1"	""	"664"	"23"	"35.000"	"28.000"	"0.165248712213007"	"28"	"0.002559"	"0.02544"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"530.83118"	"1060.65508"	"1060.65638"	"-1.22"	"-0.00065"	"10/52"	"10"	"52"	"7710858.99841309"	"HCD"	"MS2"	"0"	"292.7"	"100.000"	"56.4092"	"17956"	"17956"	"17945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.3"	""	"148.3"	""	"154.7"	""	"433.1"	""	"934.5"	"1007.6"	""	"444"	"27"	"33.000"	"26.000"	"0.045745984074594"	"21"	"0.004073"	"0.04392"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"530.83118"	"1060.65508"	"1060.65638"	"-1.22"	"-0.00065"	"5/52"	"5"	"52"	"7756404.61480713"	"HCD"	"MS2"	"0"	"292.2"	"100.000"	"56.1455"	"17849"	"17849"	"17831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.7"	""	"152.2"	""	"173.2"	""	"462.4"	"2.2"	"891.1"	"970.2"	""	"444"	"24"	"33.000"	"26.000"	"0.0934013115013466"	"18"	"0.003255"	"0.03492"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"530.83124"	"1060.65520"	"1060.65638"	"-1.11"	"-0.00059"	"6/52"	"6"	"52"	"7431558.8538208"	"HCD"	"MS2"	"0"	"289.6"	"100.000"	"56.4403"	"17934"	"17934"	"17919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.9"	""	"165.8"	""	"154.7"	""	"459.0"	"0.4"	"904.4"	"941.8"	""	"444"	"22"	"33.000"	"26.000"	"0.126576468446326"	"18"	"0.003317"	"0.03636"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STELLIR"	"[K].sTELLIR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"530.83124"	"1060.65520"	"1060.65638"	"-1.11"	"-0.00059"	"6/52"	"6"	"52"	"7394768.63012695"	"HCD"	"MS2"	"0"	"278.1"	"100.000"	"56.7154"	"18044"	"18044"	"18029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.3"	""	"136.0"	""	"141.7"	""	"417.6"	""	"888.7"	"939.2"	""	"444"	"26"	"33.000"	"26.000"	"0.0561504155211045"	"19"	"0.002875"	"0.03086"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGQNLNR"	"[K].mGQNLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"531.28949"	"1061.57170"	"1061.57233"	"-0.59"	"-0.00031"	"5/58"	"5"	"58"	"4068234.56298828"	"HCD"	"MS2"	"0"	"225.5"	"100.000"	"26.3071"	"5797"	"5797"	"5774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"344.1"	""	"307.8"	""	"284.4"	""	"261.7"	""	"451.5"	"493.9"	""	"568"	"20"	"34.000"	"27.000"	"0.310683608021275"	"22"	"0.005673"	"0.07092"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMEQLR"	"[R].gVMEQLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"3"	"531.30170"	"1061.59612"	"1061.59748"	"-1.28"	"-0.00068"	"4/52"	"4"	"52"	"4648581.10540771"	"HCD"	"MS2"	"37.73449"	"233.0"	"100.000"	"44.7077"	"13207"	"13207"	"13188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"247.2"	""	"282.4"	""	"282.6"	""	"388.0"	""	"509.1"	"524.7"	""	"817"	"14"	"36.000"	"29.000"	"1.50727349015906"	"19"	"0.007522"	"0.09597"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMEQLR"	"[R].gVMEQLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"531.30182"	"1061.59636"	"1061.59748"	"-1.05"	"-0.00056"	"6/52"	"6"	"52"	"10041468.7335205"	"HCD"	"MS2"	"21.55236"	"523.2"	"100.000"	"44.6342"	"13144"	"13144"	"13130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"728.9"	""	"685.2"	""	"683.2"	""	"669.5"	""	"1080.3"	"1128.3"	""	"819"	"23"	"36.000"	"29.000"	"0.204293197614875"	"23"	"0.005712"	"0.07094"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVMEQLR"	"[R].gVMEQLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"531.30212"	"1061.59697"	"1061.59748"	"-0.48"	"-0.00025"	"4/52"	"4"	"52"	"9492633.26965332"	"HCD"	"MS2"	"24.3962"	"496.2"	"100.000"	"44.4097"	"13087"	"13087"	"13077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"640.2"	""	"618.1"	""	"624.7"	""	"677.1"	""	"1055.1"	"1106.8"	""	"819"	"20"	"36.000"	"29.000"	"0.41615383973055"	"22"	"0.005832"	"0.0721"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGAAAK"	"[R].sVGAAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"531.33881"	"1061.67034"	"1061.67192"	"-1.49"	"-0.00079"	"6/48"	"6"	"48"	"1398085.22155762"	"HCD"	"MS2"	"0"	"122.1"	"100.000"	"28.5313"	"6669"	"6669"	"6656"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.4"	""	"152.9"	""	"151.0"	""	"204.1"	"1.3"	"233.5"	"239.5"	""	"217"	"24"	"30.000"	"23.000"	"0.0425039936661945"	"22"	"0.001348"	"0.0107"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGAAAK"	"[R].sVGAAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"531.33905"	"1061.67082"	"1061.67192"	"-1.03"	"-0.00055"	"6/48"	"6"	"48"	"9870139.20532227"	"HCD"	"MS2"	"1.681387"	"641.4"	"100.000"	"28.2289"	"6548"	"6548"	"6529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1003.0"	""	"903.6"	""	"926.1"	""	"1015.1"	""	"1114.2"	"1110.0"	""	"229"	"27"	"30.000"	"23.000"	"0.0226884844454684"	""	"0.003001"	"0.0325"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGAAAK"	"[R].sVGAAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"531.33936"	"1061.67143"	"1061.67192"	"-0.45"	"-0.00024"	"6/48"	"6"	"48"	"9561585.18811035"	"HCD"	"MS2"	"3.49611"	"646.0"	"100.000"	"28.4659"	"6600"	"6600"	"6581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1051.9"	""	"886.2"	""	"920.3"	""	"1025.2"	""	"1108.9"	"1124.7"	""	"229"	"26"	"30.000"	"23.000"	"0.0287610996407847"	""	"0.002628"	"0.02787"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGAAAK"	"[R].sVGAAAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"531.33948"	"1061.67168"	"1061.67192"	"-0.22"	"-0.00012"	"6/48"	"6"	"48"	"1674771.76879883"	"HCD"	"MS2"	"0"	"139.1"	"100.000"	"28.7482"	"6714"	"6714"	"6697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.3"	""	"181.5"	""	"184.9"	""	"215.8"	""	"260.1"	"272.8"	""	"229"	"28"	"30.000"	"23.000"	"0.0198978194891803"	""	"0.001348"	"0.01091"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGFGDNR"	"[K].aPGFGDNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"531.77942"	"1062.55156"	"1062.55297"	"-1.33"	"-0.00071"	"7/58"	"7"	"58"	"12504146.8450317"	"HCD"	"MS2"	"33.81275"	"573.2"	"100.000"	"33.4530"	"8609"	"8609"	"8588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"815.4"	""	"690.8"	""	"787.8"	""	"1003.1"	"2.9"	"1078.6"	"1053.1"	""	"533"	"17"	"34.000"	"27.000"	"0.481611904581912"	"26"	"0.001348"	"0.01053"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGFGDNR"	"[K].aPGFGDNR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"531.77972"	"1062.55217"	"1062.55297"	"-0.75"	"-0.00040"	"7/58"	"7"	"58"	"12616493.5057983"	"HCD"	"MS2"	"38.74416"	"590.6"	"100.000"	"33.3333"	"8598"	"8598"	"8577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"828.5"	""	"737.1"	""	"797.9"	""	"1006.3"	"9.5"	"1141.8"	"1077.7"	""	"540"	"17"	"34.000"	"27.000"	"0.49358705835854"	"26"	"0.0006415"	"0.00722"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].NPITGFGk.[G]"	"K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"531.80994"	"1062.61260"	"1062.61451"	"-1.80"	"-0.00096"	"5/70"	"5"	"70"	"1634187.88720703"	"HCD"	"MS2"	"0"	"91.9"	"100.000"	"51.0772"	"15793"	"15793"	"15766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.9"	"2.3"	"131.5"	""	"134.4"	""	"142.1"	""	"158.5"	"176.4"	""	"577"	"37"	"34.000"	"27.000"	"0.005664294398672"	"15"	"0.003317"	"0.03642"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPITGFGK"	"[K].NPITGFGk.[G]"	"K8(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"531.81042"	"1062.61357"	"1062.61451"	"-0.88"	"-0.00047"	"6/70"	"6"	"70"	"1825952.30871582"	"HCD"	"MS2"	"10.96775"	"98.2"	"100.000"	"51.4166"	"15894"	"15894"	"15869"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.8"	""	"132.3"	""	"153.4"	""	"146.0"	""	"172.3"	"166.9"	""	"578"	"57"	"34.000"	"27.000"	"5.8330787910397E-05"	"16"	"0.001615"	"0.01343"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAGGGGK"	"[K].aSAGGGGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"531.81860"	"1062.62993"	"1062.63078"	"-0.80"	"-0.00042"	"7/56"	"7"	"56"	"3870532.24719238"	"HCD"	"MS2"	"0"	"313.9"	"100.000"	"20.6840"	"3585"	"3585"	"3563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"519.4"	""	"410.4"	""	"423.5"	""	"494.8"	"2.5"	"522.3"	"598.1"	""	"513"	"41"	"34.000"	"27.000"	"0.00204685637284236"	"17"	"0.0001991"	"0.002136"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAGGGGK"	"[K].aSAGGGGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"531.81866"	"1062.63005"	"1062.63078"	"-0.68"	"-0.00036"	"4/56"	"4"	"56"	"2228929.07763672"	"HCD"	"MS2"	"0"	"219.2"	"100.000"	"20.7581"	"3578"	"3578"	"3552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"357.1"	""	"249.3"	""	"266.4"	""	"393.3"	"15.5"	"397.6"	"397.2"	""	"512"	"13"	"34.000"	"27.000"	"1.2654353586863"	"20"	"0.002922"	"0.03125"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INSTEDR"	"[K].iNSTEDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"532.28241"	"1063.55754"	"1063.55812"	"-0.54"	"-0.00029"	"6/64"	"6"	"64"	"369121.13494873"	"HCD"	"MS2"	"42.95126"	"33.0"	"100.000"	"22.6005"	"4290"	"4290"	"4280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	""	"31.2"	""	"38.2"	""	"55.2"	""	"70.5"	"64.8"	""	"631"	"17"	"34.000"	"28.000"	"0.674527039237955"	"22"	"0.00329"	"0.03536"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INSTEDR"	"[K].iNSTEDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"532.28253"	"1063.55779"	"1063.55812"	"-0.31"	"-0.00017"	"6/64"	"6"	"64"	"354046.645690918"	"HCD"	"MS2"	"48.51871"	"33.1"	"100.000"	"22.4502"	"4271"	"4271"	"4259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.1"	""	"35.4"	""	"52.2"	""	"54.8"	""	"63.5"	"58.2"	""	"631"	"26"	"34.000"	"28.000"	"0.0734512791793311"	"23"	"0.001261"	"0.009614"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALEQMR"	"[K].sALEQMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"532.29102"	"1063.57475"	"1063.57675"	"-1.87"	"-0.00100"	"5/58"	"5"	"58"	"5101333.37805176"	"HCD"	"MS2"	"51.50287"	"287.5"	"100.000"	"36.0510"	"9699"	"9699"	"9677"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"369.9"	""	"366.0"	""	"357.7"	""	"420.7"	""	"599.6"	"617.7"	""	"715"	"14"	"35.000"	"28.000"	"1.28906864880237"	"15"	"0.006845"	"0.08537"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALEQMR"	"[K].sALEQMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.29120"	"1063.57512"	"1063.57675"	"-1.53"	"-0.00081"	"5/58"	"5"	"58"	"5062594.27337646"	"HCD"	"MS2"	"51.21591"	"288.6"	"100.000"	"36.1630"	"9707"	"9707"	"9686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"349.4"	""	"365.1"	""	"372.6"	""	"441.4"	""	"616.7"	"597.5"	""	"715"	"14"	"35.000"	"28.000"	"1.28019476264192"	"13"	"0.007069"	"0.08978"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVVDAR"	"[R].fQVVDAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"532.30817"	"1063.60906"	"1063.60976"	"-0.66"	"-0.00035"	"5/58"	"5"	"58"	"5386774.71453857"	"HCD"	"MS2"	"4.58109"	"238.2"	"100.000"	"51.7543"	"16063"	"16063"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"383.3"	""	"331.4"	""	"355.6"	""	"380.0"	""	"408.3"	"399.2"	""	"555"	"37"	"34.000"	"27.000"	"0.00511991778822304"	"22"	"0.0009964"	"0.008481"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVVDAR"	"[R].fQVVDAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"532.30823"	"1063.60918"	"1063.60976"	"-0.55"	"-0.00029"	"5/58"	"5"	"58"	"5208236.97381592"	"HCD"	"MS2"	"6.557098"	"237.6"	"100.000"	"52.0074"	"16133"	"16133"	"16116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.9"	""	"337.7"	""	"317.1"	""	"385.8"	""	"420.6"	"402.6"	""	"555"	"37"	"34.000"	"27.000"	"0.00523917599374221"	"25"	"0.001103"	"0.008986"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDGAK"	"[K].aGSDGAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"532.31042"	"1063.61357"	"1063.61479"	"-1.15"	"-0.00061"	"5/50"	"5"	"50"	"11582094.1785889"	"HCD"	"MS2"	"5.846679"	"819.6"	"100.000"	"21.1249"	"3725"	"3725"	"3707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1330.9"	""	"1033.2"	""	"1123.6"	""	"1341.4"	""	"1473.9"	"1462.3"	""	"524"	"22"	"34.000"	"27.000"	"0.185481795508644"	"23"	"0.005712"	"0.07099"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDGAK"	"[K].aGSDGAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"532.31073"	"1063.61418"	"1063.61479"	"-0.57"	"-0.00031"	"6/50"	"6"	"50"	"13615786.0111694"	"HCD"	"MS2"	"0"	"985.5"	"100.000"	"21.1036"	"3753"	"3753"	"3739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1584.7"	""	"1243.3"	""	"1370.0"	""	"1604.0"	""	"1726.7"	"1806.3"	""	"589"	"26"	"34.000"	"27.000"	"0.0680903080706712"	"22"	"0.006845"	"0.08552"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMLDGDR"	"[K].lmLDGDR.[N]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"532.78381"	"1064.56035"	"1064.56076"	"-0.39"	"-0.00021"	"6/52"	"6"	"52"	"4798592.39416504"	"HCD"	"MS2"	"17.25371"	"201.6"	"100.000"	"44.2381"	"13018"	"13018"	"13001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.9"	""	"179.9"	""	"185.8"	""	"486.4"	"4.6"	"447.2"	"412.8"	""	"568"	"14"	"34.000"	"27.000"	"1.02877011550342"	"20"	"0.007069"	"0.09011"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPFVER"	"[R].mGPFVER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"532.79114"	"1064.57500"	"1064.57602"	"-0.96"	"-0.00051"	"5/48"	"5"	"48"	"8402255.49163818"	"HCD"	"MS2"	"16.48711"	"382.5"	"100.000"	"55.9546"	"17741"	"17741"	"17730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"570.7"	""	"546.7"	""	"547.2"	""	"446.9"	""	"790.3"	"730.2"	""	"559"	"34"	"34.000"	"27.000"	"0.0101948728165707"	"22"	"0.005426"	"0.06877"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPFVER"	"[R].mGPFVER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"532.79114"	"1064.57500"	"1064.57602"	"-0.96"	"-0.00051"	"4/48"	"4"	"48"	"14864554.24646"	"HCD"	"MS2"	"0"	"641.2"	"95.465"	"55.8363"	"17726"	"17726"	"17716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"859.0"	""	"922.1"	""	"881.8"	""	"785.2"	""	"1326.5"	"1316.0"	""	"559"	"19"	"34.000"	"27.000"	"0.366759871775868"	"20"	"0.007412"	"0.09405"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPFVER"	"[R].mGPFVER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"532.79126"	"1064.57524"	"1064.57602"	"-0.73"	"-0.00039"	"4/48"	"4"	"48"	"4571390.53662109"	"HCD"	"MS2"	"0"	"212.7"	"100.000"	"56.1089"	"17834"	"17834"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.6"	""	"282.0"	""	"299.3"	""	"297.4"	""	"457.7"	"426.9"	""	"559"	"22"	"34.000"	"27.000"	"0.192035628983978"	"23"	"0.00307"	"0.03416"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPFVER"	"[R].mGPFVER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"532.79126"	"1064.57524"	"1064.57602"	"-0.73"	"-0.00039"	"5/48"	"5"	"48"	"12198478.317688"	"HCD"	"MS2"	"0"	"569.6"	"100.000"	"56.2320"	"17851"	"17851"	"17836"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"761.3"	""	"790.1"	""	"801.5"	""	"692.6"	""	"1209.1"	"1158.5"	""	"559"	"35"	"34.000"	"27.000"	"0.00991703422907844"	"21"	"0.002799"	"0.02945"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMIEISR"	"[K].sMIEISR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"532.80164"	"1064.59599"	"1064.59715"	"-1.08"	"-0.00058"	"5/58"	"5"	"58"	"3524114.04785156"	"HCD"	"MS2"	"34.3064"	"165.1"	"100.000"	"50.6830"	"15598"	"15598"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.5"	""	"230.0"	""	"217.8"	""	"223.8"	"0.5"	"312.8"	"318.1"	""	"511"	"15"	"34.000"	"27.000"	"0.813562466801025"	"16"	"0.005308"	"0.0681"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEYVIGR"	"[R].vEYVIGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"O08619"	"Coagulation factor XIII A chain OS=Rattus norvegicus OX=10116 GN=F13a1 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"532.81805"	"1064.62883"	"1064.63016"	"-1.25"	"-0.00066"	"6/48"	"6"	"48"	"935674.707824707"	"HCD"	"MS2"	"0"	"52.1"	"100.000"	"61.9187"	"20158"	"20158"	"20139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.9"	""	"82.9"	""	"69.5"	""	"81.0"	"0.8"	"88.7"	"101.7"	""	"406"	"15"	"33.000"	"26.000"	"0.678415931253012"	"13"	"0.00212"	"0.01931"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAIYER"	"[R].aLAIYER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"532.81824"	"1064.62920"	"1064.63016"	"-0.90"	"-0.00048"	"6/48"	"6"	"48"	"1861088.96697998"	"HCD"	"MS2"	"18.56729"	"96.6"	"100.000"	"55.3184"	"17518"	"17518"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.1"	""	"135.4"	""	"135.3"	""	"144.0"	""	"171.2"	"180.6"	""	"406"	"12"	"33.000"	"26.000"	"1.18166953207487"	"20"	"0.005152"	"0.06595"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVTFLR"	"[R].eAVTFLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"532.81824"	"1064.62920"	"1064.63016"	"-0.90"	"-0.00048"	"5/54"	"5"	"54"	"5776326.52618408"	"HCD"	"MS2"	"3.303452"	"236.7"	"100.000"	"65.2390"	"21540"	"21540"	"21520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"326.7"	""	"294.1"	""	"299.3"	""	"386.4"	""	"442.7"	"502.3"	""	"406"	"21"	"33.000"	"26.000"	"0.153991247730924"	"23"	"0.005266"	"0.06649"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALAIYER"	"[R].aLAIYER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"532.81830"	"1064.62932"	"1064.63016"	"-0.79"	"-0.00042"	"6/48"	"6"	"48"	"1461036.12176514"	"HCD"	"MS2"	"46.6371"	"76.7"	"100.000"	"55.3368"	"17491"	"17491"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.8"	""	"102.3"	""	"107.4"	""	"124.7"	"0.3"	"143.1"	"143.3"	""	"406"	"13"	"33.000"	"26.000"	"0.985135655329106"	"23"	"0.008135"	"0.103"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVTFLR"	"[R].eAVTFLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"532.81836"	"1064.62944"	"1064.63016"	"-0.68"	"-0.00036"	"6/54"	"6"	"54"	"1641138.87695313"	"HCD"	"MS2"	"27.92499"	"82.9"	"100.000"	"65.8445"	"21787"	"21787"	"21769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.5"	""	"101.6"	""	"101.2"	""	"146.3"	""	"165.3"	"169.0"	""	"406"	"23"	"33.000"	"26.000"	"0.111300223878933"	"26"	"0.001718"	"0.01509"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVTFLR"	"[R].eAVTFLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"532.81836"	"1064.62944"	"1064.63016"	"-0.68"	"-0.00036"	"6/54"	"6"	"54"	"6026692.6897583"	"HCD"	"MS2"	"3.160557"	"252.4"	"100.000"	"65.2795"	"21523"	"21523"	"21503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.8"	""	"331.1"	""	"341.1"	""	"416.1"	""	"474.3"	"487.7"	""	"406"	"22"	"33.000"	"26.000"	"0.117353497623361"	"26"	"0.004213"	"0.04592"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAIYER"	"[R].aLAIYER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"532.81854"	"1064.62981"	"1064.63016"	"-0.33"	"-0.00018"	"6/48"	"6"	"48"	"1558785.48474121"	"HCD"	"MS2"	"51.80392"	"80.3"	"100.000"	"55.0011"	"17388"	"17388"	"17364"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.6"	""	"104.3"	""	"119.7"	""	"135.0"	""	"144.8"	"156.5"	""	"362"	"12"	"32.000"	"25.000"	"1.03199733282815"	"22"	"0.004819"	"0.0588"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVTFLR"	"[R].eAVTFLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"532.81854"	"1064.62981"	"1064.63016"	"-0.33"	"-0.00018"	"5/54"	"5"	"54"	"5996461.09906006"	"HCD"	"MS2"	"4.83917"	"229.4"	"100.000"	"65.5740"	"21644"	"21644"	"21631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.6"	""	"282.3"	""	"292.4"	""	"376.5"	""	"431.6"	"468.5"	""	"362"	"35"	"32.000"	"25.000"	"0.00587054707402322"	""	"0.002189"	"0.02083"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVTFLR"	"[R].eAVTFLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"532.81860"	"1064.62993"	"1064.63016"	"-0.22"	"-0.00012"	"6/54"	"6"	"54"	"1344499.63861084"	"HCD"	"MS2"	"22.4931"	"68.6"	"100.000"	"65.8920"	"21773"	"21773"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.3"	""	"89.1"	""	"91.5"	""	"114.9"	""	"140.2"	"133.9"	""	"362"	"18"	"32.000"	"25.000"	"0.263438093585336"	"20"	"0.002373"	"0.02246"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVTFLR"	"[R].eAVTFLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"532.81879"	"1064.63030"	"1064.63016"	"0.13"	"0.00007"	"5/54"	"5"	"54"	"5946240.1003418"	"HCD"	"MS2"	"4.105491"	"231.0"	"100.000"	"65.5430"	"21665"	"21665"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.4"	""	"291.6"	""	"294.3"	""	"377.0"	""	"438.4"	"467.6"	""	"364"	"35"	"32.000"	"25.000"	"0.00597133433465876"	""	"0.001261"	"0.01016"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVPAAPAR"	"[K].gPVPAAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"532.82349"	"1064.63970"	"1064.64139"	"-1.60"	"-0.00085"	"7/66"	"7"	"66"	"3792814.66003418"	"HCD"	"MS2"	"18.56218"	"216.5"	"100.000"	"31.4278"	"7828"	"7828"	"7808"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.6"	""	"225.7"	""	"256.5"	""	"454.8"	""	"463.7"	"464.8"	""	"349"	"27"	"32.000"	"25.000"	"0.0384410667802828"	"19"	"0.003704"	"0.04024"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPVPAAPAR"	"[K].gPVPAAPAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"532.82385"	"1064.64043"	"1064.64139"	"-0.91"	"-0.00048"	"7/66"	"7"	"66"	"4133151.53900146"	"HCD"	"MS2"	"19.50875"	"243.9"	"100.000"	"31.5907"	"7856"	"7856"	"7833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"265.2"	""	"248.5"	""	"280.8"	""	"504.0"	""	"512.7"	"507.5"	""	"291"	"23"	"31.000"	"24.000"	"0.0730908467755074"	"18"	"9.9E-05"	"0.0007152"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NELFSNL"	"[K].nELFSNL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"533.29193"	"1065.57659"	"1065.57779"	"-1.13"	"-0.00060"	"5/64"	"5"	"64"	"270903.473693848"	"HCD"	"MS2"	"22.56395"	"10.2"	"100.000"	"110.9539"	"39908"	"39908"	"39884"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"10.8"	""	"15.1"	""	"16.0"	""	"29.6"	"19.6"	""	"547"	"23"	"34.000"	"27.000"	"0.133339042043276"	"20"	"0.005426"	"0.06914"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NELFSNL"	"[K].nELFSNL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.29224"	"1065.57720"	"1065.57779"	"-0.56"	"-0.00030"	"5/64"	"5"	"64"	"293207.346008301"	"HCD"	"MS2"	"18.19567"	"11.1"	"100.000"	"110.8220"	"39841"	"39841"	"39815"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"14.1"	""	"14.6"	""	"20.4"	""	"20.6"	"22.0"	""	"548"	"23"	"34.000"	"27.000"	"0.129345273306224"	"14"	"0.004234"	"0.04989"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"533.29749"	"1065.58769"	"1065.58902"	"-1.25"	"-0.00067"	"6/64"	"6"	"64"	"8438620.89526367"	"HCD"	"MS2"	"37.39397"	"416.8"	"100.000"	"34.9885"	"9231"	"9231"	"9216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"479.2"	""	"504.3"	""	"517.7"	""	"789.0"	""	"834.8"	"839.0"	""	"436"	"22"	"33.000"	"26.000"	"0.13914143998954"	"17"	"0.0001991"	"0.005327"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"533.29785"	"1065.58843"	"1065.58902"	"-0.56"	"-0.00030"	"7/64"	"7"	"64"	"76381438.5004883"	"HCD"	"MS2"	"0"	"546.0"	"15.049"	"35.2776"	"9348"	"9348"	"9338"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"678.7"	""	"691.1"	""	"739.6"	""	"903.5"	""	"1058.5"	"1109.6"	""	"439"	"29"	"33.000"	"26.000"	"0.0252600685373303"	"20"	"0.002084"	"0.01864"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"533.29797"	"1065.58867"	"1065.58902"	"-0.33"	"-0.00018"	"7/64"	"7"	"64"	"5186737.55096436"	"HCD"	"MS2"	"6.553574"	"297.2"	"100.000"	"35.4518"	"9455"	"9455"	"9435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"358.5"	""	"371.0"	""	"396.7"	""	"508.5"	"6.8"	"577.4"	"601.0"	""	"427"	"20"	"33.000"	"26.000"	"0.237901882921834"	"16"	"0.0001991"	"0.005975"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"533.29797"	"1065.58867"	"1065.58902"	"-0.33"	"-0.00018"	"6/64"	"6"	"64"	"7576170.29827881"	"HCD"	"MS2"	"43.23201"	"398.0"	"100.000"	"34.8577"	"9216"	"9216"	"9201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"460.9"	""	"476.6"	""	"492.5"	""	"747.4"	""	"814.0"	"789.0"	""	"427"	"24"	"33.000"	"26.000"	"0.0775171646934167"	"17"	"0.0001991"	"0.003328"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"533.29803"	"1065.58879"	"1065.58902"	"-0.22"	"-0.00012"	"7/64"	"7"	"64"	"82969102.4682617"	"HCD"	"MS2"	"0"	"553.3"	"14.073"	"35.1374"	"9328"	"9328"	"9317"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"699.6"	""	"697.9"	""	"729.7"	""	"905.1"	""	"1066.5"	"1157.0"	""	"427"	"30"	"33.000"	"26.000"	"0.0193819683193043"	"20"	"0.001261"	"0.0098"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIDAGYR"	"[K].aAIDAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.29828"	"1065.58928"	"1065.58902"	"0.24"	"0.00013"	"6/56"	"6"	"56"	"5704503.41168213"	"HCD"	"MS2"	"26.32813"	"325.1"	"100.000"	"37.3016"	"10167"	"10167"	"10147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"470.5"	""	"439.8"	""	"466.7"	""	"431.8"	""	"606.3"	"671.5"	""	"430"	"28"	"33.000"	"26.000"	"0.0327671342066418"	"14"	"0.0001991"	"0.005005"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSR"	"[R].gPSYGLSR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"533.29834"	"1065.58940"	"1065.58902"	"0.36"	"0.00019"	"12/64"	"12"	"64"	"5105918.37139893"	"HCD"	"MS2"	"4.047734"	"288.5"	"100.000"	"35.5737"	"9467"	"9467"	"9447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.0"	""	"356.0"	""	"365.9"	""	"490.9"	"5.5"	"559.0"	"598.8"	""	"430"	"15"	"33.000"	"26.000"	"0.711931911187571"	"16"	"0.001488"	"0.01275"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIDAGYR"	"[K].aAIDAGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"Q5RJP0"	"Aldose reductase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Akr1b7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.29846"	"1065.58965"	"1065.58902"	"0.58"	"0.00031"	"6/56"	"6"	"56"	"5766863.01513672"	"HCD"	"MS2"	"25.11574"	"338.2"	"100.000"	"37.1989"	"10162"	"10162"	"10147"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"506.2"	""	"480.8"	""	"463.3"	""	"434.5"	""	"640.7"	"683.4"	""	"430"	"28"	"33.000"	"26.000"	"0.0335303788107795"	"14"	"0.0001991"	"0.004842"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"533.78918"	"1066.57109"	"1066.57304"	"-1.83"	"-0.00097"	"6/54"	"6"	"54"	"712392.283813477"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"61.4061"	"19986"	"19986"	"19958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"53.2"	""	"68.2"	""	"59.3"	""	"85.1"	"89.1"	""	"488"	"15"	"33.000"	"26.000"	"0.755770309008845"	"15"	"0.001951"	"0.01693"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"533.78973"	"1066.57219"	"1066.57304"	"-0.80"	"-0.00042"	"6/54"	"6"	"54"	"779985.070983887"	"HCD"	"MS2"	"10.33109"	"48.6"	"100.000"	"61.4637"	"19978"	"19978"	"19957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.0"	""	"65.2"	""	"76.6"	""	"77.3"	""	"89.2"	"92.8"	""	"489"	"16"	"33.000"	"26.000"	"0.602946617953796"	"17"	"0.002559"	"0.02577"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"533.78979"	"1066.57231"	"1066.57304"	"-0.68"	"-0.00036"	"6/54"	"6"	"54"	"2623730.22253418"	"HCD"	"MS2"	"0"	"125.8"	"100.000"	"61.0772"	"19852"	"19852"	"19832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.2"	""	"167.4"	""	"180.7"	""	"190.6"	""	"231.2"	"238.9"	""	"489"	"19"	"33.000"	"26.000"	"0.317891461829139"	"15"	"0.004213"	"0.04604"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"533.78986"	"1066.57244"	"1066.57304"	"-0.57"	"-0.00030"	"6/54"	"6"	"54"	"2618040.60394287"	"HCD"	"MS2"	"1.466469"	"120.2"	"100.000"	"61.1529"	"19851"	"19851"	"19834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.9"	""	"162.2"	""	"177.0"	""	"178.5"	""	"212.4"	"233.8"	""	"489"	"19"	"33.000"	"26.000"	"0.315703112398509"	"18"	"0.00329"	"0.03577"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"533.78992"	"1066.57256"	"1066.57304"	"-0.45"	"-0.00024"	"6/54"	"6"	"54"	"1806465.80969238"	"HCD"	"MS2"	"4.317958"	"90.9"	"100.000"	"60.7498"	"19719"	"19719"	"19700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.2"	""	"118.5"	""	"127.9"	""	"139.7"	""	"170.1"	"179.5"	""	"484"	"19"	"33.000"	"26.000"	"0.281718499117339"	"15"	"0.002628"	"0.02733"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDFTGR"	"[R].lEDFTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"533.79034"	"1066.57341"	"1066.57304"	"0.35"	"0.00019"	"6/54"	"6"	"54"	"1800979.00714111"	"HCD"	"MS2"	"0"	"90.7"	"100.000"	"60.8541"	"19729"	"19729"	"19710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.8"	""	"128.3"	""	"115.4"	""	"137.2"	"1.3"	"166.6"	"183.1"	""	"481"	"17"	"33.000"	"26.000"	"0.521332837209137"	"15"	"0.002755"	"0.02917"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGASGSFR"	"[K].gVGASGSFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"533.79547"	"1066.58367"	"1066.58427"	"-0.57"	"-0.00030"	"7/68"	"7"	"68"	"6912288.67828369"	"HCD"	"MS2"	"9.26054"	"327.6"	"100.000"	"31.6896"	"7896"	"7896"	"7873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"439.6"	""	"571.3"	""	"686.7"	""	"402.4"	""	"547.7"	"448.1"	""	"471"	"39"	"33.000"	"26.000"	"0.00307603244155048"	""	"9.9E-05"	"0.0006348"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGASGSFR"	"[K].gVGASGSFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.79559"	"1066.58391"	"1066.58427"	"-0.34"	"-0.00018"	"7/68"	"7"	"68"	"6696253.15869141"	"HCD"	"MS2"	"11.62064"	"326.6"	"100.000"	"31.5599"	"7881"	"7881"	"7860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"434.7"	""	"606.1"	""	"663.0"	""	"411.7"	""	"530.1"	"439.9"	""	"470"	"41"	"33.000"	"26.000"	"0.00207046485156883"	"15"	"0"	"0.0001374"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTSIF"	"[K].eLQTSIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80219"	"1066.59709"	"1066.59819"	"-1.03"	"-0.00055"	"5/56"	"5"	"56"	"233229.533813477"	"HCD"	"MS2"	"7.167012"	"8.4"	"100.000"	"109.2984"	"39234"	"39234"	"39221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"11.8"	""	"13.3"	""	"10.1"	""	"13.6"	"14.8"	""	"395"	"29"	"32.000"	"25.000"	"0.025151685850079"	"14"	"0.003529"	"0.039"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTSIF"	"[K].eLQTSIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80237"	"1066.59746"	"1066.59819"	"-0.69"	"-0.00037"	"5/56"	"5"	"56"	"183927.313049316"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"109.8449"	"39458"	"39458"	"39442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.3"	""	"10.2"	""	"9.1"	""	"11.7"	""	"16.0"	"12.2"	""	"395"	"23"	"32.000"	"25.000"	"0.096954305540139"	"14"	"0.00452"	"0.05239"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTSIF"	"[K].eLQTSIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80243"	"1066.59758"	"1066.59819"	"-0.57"	"-0.00031"	"5/56"	"5"	"56"	"249767.311584473"	"HCD"	"MS2"	"18.69909"	"8.3"	"100.000"	"109.5786"	"39341"	"39341"	"39332"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.1"	""	"10.8"	""	"9.9"	""	"13.3"	""	"17.2"	"20.0"	""	"395"	"24"	"32.000"	"25.000"	"0.0743990002993219"	"14"	"0.002035"	"0.01823"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTSIF"	"[K].eLQTSIF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"533.80243"	"1066.59758"	"1066.59819"	"-0.57"	"-0.00031"	"5/56"	"5"	"56"	"196064.981933594"	"HCD"	"MS2"	"9.29076"	"7.1"	"100.000"	"109.5070"	"39326"	"39326"	"39312"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.0"	""	"8.3"	""	"11.1"	""	"13.1"	""	"10.4"	"14.7"	""	"395"	"26"	"32.000"	"25.000"	"0.0465122233569461"	"20"	"0.003568"	"0.03978"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTVDIR"	"[K].sFTVDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"533.80762"	"1066.60796"	"1066.60943"	"-1.38"	"-0.00073"	"4/56"	"4"	"56"	"470710.514709473"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"66.4864"	"22014"	"22014"	"21992"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"36.4"	""	"39.4"	""	"52.4"	"1.3"	"55.0"	"50.5"	""	"358"	"22"	"32.000"	"25.000"	"0.101824674621048"	"15"	"0.009846"	"0.1329"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTPLTR"	"[K].ySTPLTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"533.80762"	"1066.60796"	"1066.60943"	"-1.38"	"-0.00073"	"5/56"	"5"	"56"	"4914957.14007568"	"HCD"	"MS2"	"0"	"227.2"	"100.000"	"40.7582"	"11569"	"11569"	"11550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.6"	""	"260.1"	""	"282.1"	""	"397.8"	"3.7"	"450.6"	"508.8"	""	"358"	"14"	"32.000"	"25.000"	"0.751368581343903"	"15"	"0.004819"	"0.05722"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YISDALR"	"[K].yISDALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"533.80768"	"1066.60808"	"1066.60943"	"-1.26"	"-0.00067"	"9/50"	"9"	"50"	"2239273.50482178"	"HCD"	"MS2"	"0"	"117.2"	"100.000"	"56.9525"	"18175"	"18175"	"18153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.7"	""	"148.3"	""	"160.1"	""	"183.9"	""	"218.4"	"243.5"	""	"358"	"30"	"32.000"	"25.000"	"0.016898689685518"	"24"	"0.001488"	"0.01255"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YISDALR"	"[K].yISDALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"533.80774"	"1066.60820"	"1066.60943"	"-1.15"	"-0.00061"	"9/50"	"9"	"50"	"2104908.05938721"	"HCD"	"MS2"	"0"	"102.7"	"100.000"	"57.2039"	"18242"	"18242"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.9"	""	"128.3"	""	"144.9"	""	"168.0"	""	"185.5"	"208.9"	""	"360"	"29"	"32.000"	"25.000"	"0.0235110759863731"	"23"	"0.001453"	"0.01156"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFTLVR"	"[K].dSFTLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"533.80786"	"1066.60845"	"1066.60943"	"-0.92"	"-0.00049"	"5/54"	"5"	"54"	"1034804.19152832"	"HCD"	"MS2"	"31.0147"	"48.6"	"100.000"	"62.1227"	"20274"	"20274"	"20255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.3"	""	"66.0"	""	"80.7"	""	"71.0"	""	"88.9"	"82.3"	""	"360"	"22"	"32.000"	"25.000"	"0.104778579198757"	"19"	"0.002286"	"0.02168"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTPLTR"	"[K].ySTPLTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"533.80792"	"1066.60857"	"1066.60943"	"-0.80"	"-0.00043"	"8/56"	"8"	"56"	"31488115.706543"	"HCD"	"MS2"	"0.3385365"	"357.7"	"28.025"	"40.4514"	"11480"	"11480"	"11464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"391.3"	""	"423.4"	""	"449.2"	""	"618.5"	"1.3"	"715.8"	"798.6"	""	"360"	"18"	"32.000"	"25.000"	"0.263191891402209"	"15"	"0.006997"	"0.08865"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFTLVR"	"[K].dSFTLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80798"	"1066.60869"	"1066.60943"	"-0.69"	"-0.00037"	"5/54"	"5"	"54"	"1426749.60308838"	"HCD"	"MS2"	"59.95738"	"63.1"	"100.000"	"61.8262"	"20154"	"20154"	"20133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.8"	""	"83.5"	""	"87.9"	""	"92.6"	"0.2"	"111.8"	"117.3"	""	"360"	"14"	"32.000"	"25.000"	"0.764315215103363"	"14"	"0.002419"	"0.0229"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFTLVR"	"[K].dSFTLVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"P42533"	"Tissue factor OS=Rattus norvegicus OX=10116 GN=F3 PE=2 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"533.80811"	"1066.60893"	"1066.60943"	"-0.46"	"-0.00025"	"5/54"	"5"	"54"	"1398769.60797119"	"HCD"	"MS2"	"38.89963"	"71.3"	"100.000"	"62.0069"	"20194"	"20194"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.5"	""	"101.0"	""	"99.0"	""	"119.5"	""	"122.8"	"123.1"	""	"361"	"25"	"32.000"	"25.000"	"0.0520567686314353"	"22"	"0.001348"	"0.0112"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTPLTR"	"[K].ySTPLTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80817"	"1066.60906"	"1066.60943"	"-0.35"	"-0.00018"	"8/56"	"8"	"56"	"10148434.1724854"	"HCD"	"MS2"	"1.427339"	"460.6"	"100.000"	"40.1522"	"11357"	"11357"	"11341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"596.0"	""	"578.6"	""	"595.2"	""	"834.5"	"8.3"	"831.5"	"922.7"	""	"353"	"12"	"32.000"	"25.000"	"1.05619646528146"	"13"	"0.006198"	"0.07534"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTPLTR"	"[K].ySTPLTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.80823"	"1066.60918"	"1066.60943"	"-0.23"	"-0.00012"	"8/56"	"8"	"56"	"38410643.3818359"	"HCD"	"MS2"	"0"	"466.7"	"30.190"	"40.4597"	"11449"	"11449"	"11437"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"540.3"	""	"568.6"	""	"576.2"	""	"835.6"	"1.2"	"897.4"	"1010.8"	""	"353"	"18"	"32.000"	"25.000"	"0.259863156679375"	"14"	"0.008792"	"0.1114"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTVDIR"	"[K].sFTVDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"533.80829"	"1066.60930"	"1066.60943"	"-0.12"	"-0.00006"	"5/56"	"5"	"56"	"1310299.72900391"	"HCD"	"MS2"	"12.91533"	"60.1"	"100.000"	"70.1172"	"23486"	"23486"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.0"	""	"85.0"	""	"82.8"	""	"101.8"	""	"111.8"	"112.8"	""	"353"	"41"	"32.000"	"25.000"	"0.00125818559817331"	""	"0.0001991"	"0.004975"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTVDIR"	"[K].sFTVDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"533.80835"	"1066.60942"	"1066.60943"	"0.00"	"0.00000"	"5/56"	"5"	"56"	"1303665.42333984"	"HCD"	"MS2"	"10.05578"	"61.6"	"100.000"	"70.1996"	"23553"	"23553"	"23533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.9"	""	"80.4"	""	"82.4"	""	"101.2"	""	"104.5"	"123.0"	""	"353"	"41"	"32.000"	"25.000"	"0.00127568870335783"	""	"0.001615"	"0.01377"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTPLTR"	"[K].ySTPLTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"533.80884"	"1066.61040"	"1066.60943"	"0.91"	"0.00049"	"4/56"	"4"	"56"	"4609116.16680908"	"HCD"	"MS2"	"10.42825"	"225.5"	"100.000"	"40.1837"	"11336"	"11336"	"11313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"306.1"	"2.4"	"289.7"	""	"292.2"	""	"379.5"	"3.1"	"407.7"	"457.5"	""	"355"	"13"	"32.000"	"25.000"	"0.794691114913043"	"14"	"0.004634"	"0.05443"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"356.21118"	"1066.61899"	"1066.62066"	"-1.56"	"-0.00056"	"5/52"	"5"	"52"	"24125046.574585"	"HCD"	"MS2"	"2.230219"	"149.6"	"47.002"	"30.6929"	"7536"	"7536"	"7519"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.7"	""	"175.5"	""	"189.4"	""	"270.2"	"0.4"	"291.6"	"287.0"	""	"341"	"21"	"32.000"	"25.000"	"0.151260100052472"	"21"	"0.003357"	"0.03765"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"356.21136"	"1066.61954"	"1066.62066"	"-1.05"	"-0.00037"	"6/52"	"6"	"52"	"22774268.5490723"	"HCD"	"MS2"	"2.388587"	"160.8"	"54.594"	"30.8061"	"7544"	"7544"	"7533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.3"	""	"195.3"	""	"212.4"	""	"281.9"	""	"322.5"	"309.2"	""	"283"	"32"	"31.000"	"24.000"	"0.00819891605444037"	"22"	"0.002462"	"0.0231"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"533.81366"	"1066.62004"	"1066.62066"	"-0.58"	"-0.00031"	"4/52"	"4"	"52"	"2274751.02478027"	"HCD"	"MS2"	"8.360757"	"133.8"	"100.000"	"30.7855"	"7536"	"7536"	"7525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.6"	""	"181.9"	""	"178.2"	""	"209.8"	""	"245.2"	"267.0"	""	"283"	"24"	"31.000"	"24.000"	"0.0613417892918354"	"23"	"0.006814"	"0.0847"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHISPDR"	"[R].lHISPDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"P30904"	"Macrophage migration inhibitory factor OS=Rattus norvegicus OX=10116 GN=Mif PE=1 SV=4"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"533.81384"	"1066.62041"	"1066.62066"	"-0.23"	"-0.00013"	"4/52"	"4"	"52"	"2648728.53338623"	"HCD"	"MS2"	"0"	"152.7"	"100.000"	"30.7136"	"7544"	"7544"	"7534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.7"	""	"206.2"	""	"204.9"	""	"249.7"	"0.7"	"307.4"	"286.9"	""	"281"	"24"	"31.000"	"24.000"	"0.0578997014331749"	"24"	"0.00455"	"0.05368"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVHLDVR"	"[K].vVHLDVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"356.22348"	"1066.65589"	"1066.65704"	"-1.08"	"-0.00039"	"6/48"	"6"	"48"	"1794394.00720215"	"HCD"	"MS2"	"27.64151"	"37.0"	"100.000"	"41.0293"	"11680"	"11680"	"11657"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.5"	""	"48.4"	""	"53.8"	""	"56.6"	"0.9"	"75.2"	"74.5"	""	"121"	"17"	"27.000"	"20.000"	"0.111366706088872"	"14"	"0.003043"	"0.03278"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHGQLLR"	"[R].lHGqLLR.[Q]"	"N-Term(TMT6plex); Q4(Deamidated)"	"1"	"1"	"Q5BJK8"	"Golgi integral membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Golim4 PE=1 SV=2"	"Q5BJK8"	"Golgi integral membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Golim4 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"356.22372"	"1066.65662"	"1066.65704"	"-0.40"	"-0.00014"	"7/56"	"7"	"56"	"1162774.28985596"	"HCD"	"MS2"	"36.12467"	"40.6"	"100.000"	"33.5330"	"8680"	"8680"	"8649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.9"	""	"47.9"	""	"55.8"	""	"73.4"	"0.3"	"86.2"	"77.9"	""	"109"	"4"	"27.000"	"20.000"	"2.25110888584638"	"15"	"0.008718"	"0.1105"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVHLDVR"	"[K].vVHLDVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"356.22397"	"1066.65735"	"1066.65704"	"0.29"	"0.00010"	"5/48"	"5"	"48"	"1749301.29077148"	"HCD"	"MS2"	"69.42077"	"35.0"	"100.000"	"40.8812"	"11655"	"11655"	"11624"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"40.6"	""	"51.4"	""	"57.5"	""	"74.9"	"67.6"	""	"109"	"16"	"27.000"	"20.000"	"0.143349605558298"	"14"	"0.0005161"	"0.006884"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVVASYR"	"[K].gSVVASYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"534.30499"	"1067.60271"	"1067.60467"	"-1.84"	"-0.00098"	"7/64"	"7"	"64"	"5695795.95849609"	"HCD"	"MS2"	"38.01253"	"260.2"	"100.000"	"33.7861"	"8745"	"8745"	"8723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"351.8"	""	"333.7"	""	"359.8"	""	"515.8"	""	"428.7"	"475.5"	""	"275"	"26"	"31.000"	"24.000"	"0.0345384384332567"	"20"	"0.0001991"	"0.004644"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVVASYR"	"[K].gSVVASYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"Q7TQ94"	"Deaminated glutathione amidase OS=Rattus norvegicus OX=10116 GN=Nit1 PE=2 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"534.30548"	"1067.60369"	"1067.60467"	"-0.93"	"-0.00049"	"6/64"	"6"	"64"	"5546952.70581055"	"HCD"	"MS2"	"39.68748"	"256.2"	"100.000"	"33.6686"	"8735"	"8735"	"8713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"350.6"	""	"329.9"	""	"365.7"	""	"476.5"	""	"414.0"	"489.5"	""	"280"	"22"	"31.000"	"24.000"	"0.0873228769675387"	"19"	"0.0001991"	"0.005547"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"356.54300"	"1067.61444"	"1067.61591"	"-1.37"	"-0.00049"	"10/56"	"10"	"56"	"16586250.7703247"	"HCD"	"MS2"	"2.100705"	"214.8"	"100.000"	"21.4338"	"3888"	"3888"	"3873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.0"	""	"306.6"	""	"322.0"	""	"328.9"	""	"357.0"	"412.8"	""	"289"	"33"	"31.000"	"24.000"	"0.00727558379698523"	""	"0.0001991"	"0.004485"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"534.31091"	"1067.61455"	"1067.61591"	"-1.27"	"-0.00068"	"6/56"	"6"	"56"	"4964605.80200195"	"HCD"	"MS2"	"22.82749"	"235.5"	"100.000"	"21.4430"	"3892"	"3892"	"3873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"337.2"	""	"317.9"	""	"371.2"	""	"366.9"	""	"399.9"	"442.9"	""	"289"	"35"	"31.000"	"24.000"	"0.00447577088736795"	"23"	"0.0001686"	"0.001965"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"356.54327"	"1067.61527"	"1067.61591"	"-0.60"	"-0.00021"	"10/56"	"10"	"56"	"17157765.3060913"	"HCD"	"MS2"	"48.05132"	"180.4"	"82.997"	"21.4848"	"3872"	"3872"	"3849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.1"	""	"257.1"	""	"255.7"	""	"296.7"	"1.3"	"308.5"	"338.5"	""	"247"	"36"	"30.000"	"23.000"	"0.00295574495916065"	""	"0.0001991"	"0.003785"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVAEGHR"	"[R].gLVAEGHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"534.31140"	"1067.61553"	"1067.61591"	"-0.36"	"-0.00019"	"6/56"	"6"	"56"	"4736405.57781982"	"HCD"	"MS2"	"24.86597"	"227.2"	"100.000"	"21.4985"	"3878"	"3878"	"3849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.2"	""	"300.1"	""	"327.4"	""	"357.8"	""	"394.9"	"440.5"	""	"247"	"37"	"30.000"	"23.000"	"0.00271435694288926"	"22"	"9.9E-05"	"0.0006407"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDmAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"534.78851"	"1068.56975"	"1068.57093"	"-1.11"	"-0.00059"	"5/48"	"5"	"48"	"1926004.19055176"	"HCD"	"MS2"	"23.86882"	"101.8"	"100.000"	"53.2211"	"16662"	"16662"	"16641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.5"	""	"130.3"	""	"135.4"	""	"239.7"	""	"172.5"	"163.2"	""	"352"	"17"	"32.000"	"25.000"	"0.383276919934156"	"20"	"0.008926"	"0.1159"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDmAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"534.78876"	"1068.57024"	"1068.57093"	"-0.65"	"-0.00035"	"6/48"	"6"	"48"	"2840293.137146"	"HCD"	"MS2"	"4.204725"	"116.0"	"100.000"	"53.5063"	"16778"	"16778"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.4"	""	"101.9"	""	"111.3"	""	"381.6"	"0.1"	"203.7"	"191.5"	""	"352"	"18"	"32.000"	"25.000"	"0.303048869197537"	"19"	"0.009444"	"0.125"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDmAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"534.78888"	"1068.57048"	"1068.57093"	"-0.42"	"-0.00022"	"5/48"	"5"	"48"	"2787490.71014404"	"HCD"	"MS2"	"0"	"111.0"	"100.000"	"53.8702"	"16893"	"16893"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.5"	""	"111.3"	""	"102.1"	""	"355.3"	"0.2"	"207.1"	"178.6"	""	"351"	"17"	"32.000"	"25.000"	"0.328304715634198"	"19"	"0.008893"	"0.1135"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDmAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"534.78894"	"1068.57060"	"1068.57093"	"-0.31"	"-0.00016"	"5/48"	"5"	"48"	"1513219.92034912"	"HCD"	"MS2"	"19.22022"	"84.1"	"100.000"	"53.5662"	"16769"	"16769"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.7"	""	"107.4"	""	"104.4"	""	"205.4"	"1.2"	"144.4"	"138.3"	""	"351"	"13"	"32.000"	"25.000"	"0.822767485664941"	"19"	"0.007443"	"0.09475"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDmAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"534.78894"	"1068.57060"	"1068.57093"	"-0.31"	"-0.00016"	"5/48"	"5"	"48"	"2906335.54492188"	"HCD"	"MS2"	"3.194553"	"121.2"	"100.000"	"53.2486"	"16639"	"16639"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.3"	""	"142.9"	""	"129.7"	""	"341.4"	""	"208.3"	"199.9"	""	"351"	"16"	"32.000"	"25.000"	"0.417135470302666"	"17"	"0.008718"	"0.1106"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FALDMAR"	"[K].fALDmAR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"534.78912"	"1068.57097"	"1068.57093"	"0.04"	"0.00002"	"6/48"	"6"	"48"	"923431.266479492"	"HCD"	"MS2"	"3.942636"	"50.2"	"100.000"	"53.8125"	"16903"	"16903"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.9"	""	"48.0"	""	"54.4"	""	"135.3"	"1.2"	"100.9"	"86.9"	""	"351"	"15"	"32.000"	"25.000"	"0.522729633364823"	"17"	"0.008718"	"0.1102"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGLSDLY"	"[K].tAGLSDLY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRE4"	"Tumor susceptibility gene 101 protein OS=Rattus norvegicus OX=10116 GN=Tsg101 PE=1 SV=1"	"Q6IRE4"	"Tumor susceptibility gene 101 protein OS=Rattus norvegicus OX=10116 GN=Tsg101 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"534.79266"	"1068.57805"	"1068.57746"	"0.56"	"0.00030"	"7/68"	"7"	"68"	"731653.836425781"	"HCD"	"MS2"	"43.30144"	"27.2"	"100.000"	"98.0562"	"34809"	"34809"	"34787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.9"	""	"38.0"	""	"32.4"	""	"42.5"	""	"55.8"	"57.8"	""	"313"	"18"	"31.000"	"24.000"	"0.238514255969276"	"14"	"0.001348"	"0.01112"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"3"	"356.88293"	"1068.63425"	"1068.63631"	"-1.93"	"-0.00069"	"5/56"	"5"	"56"	"4826504.78399658"	"HCD"	"MS2"	"8.98236"	"91.1"	"100.000"	"42.6582"	"12338"	"12338"	"12314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.6"	"2.3"	"98.5"	""	"108.8"	""	"167.8"	""	"215.6"	"191.7"	""	"198"	"18"	"29.000"	"22.000"	"0.14442261176726"	"15"	"0.001872"	"0.01545"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"3"	"356.88306"	"1068.63462"	"1068.63631"	"-1.58"	"-0.00056"	"6/56"	"6"	"56"	"7283886.81787109"	"HCD"	"MS2"	"3.235202"	"133.1"	"100.000"	"42.9570"	"12460"	"12460"	"12441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.8"	"4.4"	"107.9"	""	"142.4"	""	"259.7"	"1.0"	"338.6"	"304.5"	""	"198"	"27"	"29.000"	"22.000"	"0.0193034615376047"	""	"0.001261"	"0.009749"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"3"	"356.88312"	"1068.63480"	"1068.63631"	"-1.41"	"-0.00050"	"6/56"	"6"	"56"	"5556730.54656982"	"HCD"	"MS2"	"13.33706"	"99.5"	"100.000"	"42.5200"	"12316"	"12316"	"12287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"95.0"	""	"109.8"	""	"203.1"	""	"256.3"	"210.2"	""	"198"	"29"	"29.000"	"22.000"	"0.0133547325376574"	""	"0.0001991"	"0.005701"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLHVSLR"	"[K].dLHVSLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"3"	"356.88324"	"1068.63517"	"1068.63631"	"-1.07"	"-0.00038"	"6/56"	"6"	"56"	"7496103.09136963"	"HCD"	"MS2"	"2.50617"	"122.4"	"87.020"	"42.7983"	"12429"	"12429"	"12414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.7"	""	"105.2"	""	"127.7"	""	"223.5"	""	"315.4"	"289.1"	""	"199"	"31"	"29.000"	"22.000"	"0.00746144738285794"	""	"0.0001991"	"0.005923"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMMQSGR"	"[R].mMMQSGR.[K]"	"N-Term(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"535.26093"	"1069.51457"	"1069.51541"	"-0.78"	"-0.00042"	"4/54"	"4"	"54"	"2562326.58520508"	"HCD"	"MS2"	"50.34306"	"158.6"	"100.000"	"33.3125"	"8590"	"8590"	"8561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.5"	""	"190.9"	""	"232.5"	""	"224.6"	"0.7"	"304.2"	"325.3"	""	"247"	"9"	"30.000"	"23.000"	"1.40496969799194"	"15"	"0.005266"	"0.06769"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNADFR"	"[R].aFNADFR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"535.28387"	"1069.56047"	"1069.56281"	"-2.19"	"-0.00117"	"6/56"	"6"	"56"	"2742090.87213135"	"HCD"	"MS2"	"0"	"137.8"	"100.000"	"56.5709"	"17986"	"17986"	"17972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.4"	""	"198.1"	""	"212.7"	""	"210.8"	""	"208.7"	"271.1"	""	"235"	"34"	"30.000"	"23.000"	"0.00502386391228114"	""	"0.001951"	"0.01671"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNADFR"	"[R].aFNADFR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"535.28436"	"1069.56145"	"1069.56281"	"-1.27"	"-0.00068"	"6/56"	"6"	"56"	"8781092.42919922"	"HCD"	"MS2"	"0"	"389.6"	"100.000"	"56.5237"	"18001"	"18001"	"17992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"576.7"	""	"529.8"	""	"604.0"	""	"605.3"	""	"646.6"	"728.5"	""	"233"	"35"	"30.000"	"23.000"	"0.00367558038623144"	"23"	"0.001999"	"0.01741"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNADFR"	"[R].aFNADFR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"535.28455"	"1069.56182"	"1069.56281"	"-0.93"	"-0.00050"	"6/56"	"6"	"56"	"7443486.39678955"	"HCD"	"MS2"	"0"	"338.6"	"100.000"	"56.8804"	"18111"	"18111"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"491.9"	""	"451.3"	""	"517.3"	""	"523.4"	""	"569.7"	"652.5"	""	"235"	"34"	"30.000"	"23.000"	"0.00483100922297814"	""	"0.00192"	"0.0162"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNADFR"	"[R].aFNADFR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"535.28491"	"1069.56255"	"1069.56281"	"-0.25"	"-0.00013"	"5/56"	"5"	"56"	"1977028.03039551"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"56.2418"	"17888"	"17888"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.3"	""	"142.3"	""	"144.9"	""	"161.9"	""	"166.1"	"181.0"	""	"243"	"27"	"30.000"	"23.000"	"0.0246363450421836"	"20"	"0.001615"	"0.01415"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLYAATR"	"[K].mLYAATR.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.79688"	"1070.58647"	"1070.58658"	"-0.10"	"-0.00005"	"6/48"	"6"	"48"	"3636879.71185303"	"HCD"	"MS2"	"11.72699"	"161.6"	"100.000"	"33.3791"	"8617"	"8617"	"8592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.7"	""	"212.8"	""	"208.0"	""	"326.3"	""	"297.6"	"277.9"	""	"306"	"15"	"31.000"	"24.000"	"0.500831263164622"	"13"	"0.007792"	"0.09962"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLYAATR"	"[K].mLYAATR.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.79694"	"1070.58660"	"1070.58658"	"0.01"	"0.00001"	"6/48"	"6"	"48"	"3647829.08972168"	"HCD"	"MS2"	"24.88185"	"159.6"	"100.000"	"33.4944"	"8626"	"8626"	"8604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.1"	""	"188.5"	""	"237.4"	""	"314.7"	"1.7"	"297.2"	"276.7"	""	"306"	"15"	"31.000"	"24.000"	"0.495098295102332"	"13"	"0.005308"	"0.06807"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEGLHR"	"[R].vMEGLHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"357.53683"	"1070.59595"	"1070.59782"	"-1.74"	"-0.00062"	"9/48"	"9"	"48"	"3431457.59527588"	"HCD"	"MS2"	"30.93629"	"138.5"	"100.000"	"32.1417"	"8078"	"8078"	"8063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.9"	""	"187.8"	""	"178.9"	""	"229.9"	""	"264.4"	"275.1"	""	"306"	"27"	"31.000"	"24.000"	"0.0293556317322554"	"15"	"0.0009352"	"0.007962"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEGLHR"	"[R].vMEGLHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"357.53714"	"1070.59687"	"1070.59782"	"-0.89"	"-0.00032"	"9/48"	"9"	"48"	"3684071.53338623"	"HCD"	"MS2"	"29.03523"	"140.9"	"100.000"	"32.0520"	"8079"	"8079"	"8064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.7"	""	"188.9"	""	"187.0"	""	"232.7"	""	"275.7"	"272.8"	""	"284"	"28"	"31.000"	"24.000"	"0.0249625153182134"	"15"	"0.001615"	"0.01413"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIITTTR"	"[K].hIITTTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"357.55511"	"1070.65079"	"1070.65196"	"-1.09"	"-0.00039"	"5/52"	"5"	"52"	"855505.125549316"	"HCD"	"MS2"	"12.19314"	"35.1"	"100.000"	"22.5082"	"4255"	"4255"	"4238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"48.5"	""	"50.2"	""	"59.1"	"2.8"	"74.5"	"63.1"	""	"276"	"25"	"31.000"	"24.000"	"0.0419642133543326"	"18"	"0.003001"	"0.03246"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIITTTR"	"[K].hIITTTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"357.55524"	"1070.65116"	"1070.65196"	"-0.75"	"-0.00027"	"5/52"	"5"	"52"	"947905.555053711"	"HCD"	"MS2"	"28.90016"	"35.9"	"100.000"	"22.3554"	"4236"	"4236"	"4230"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.4"	""	"44.7"	""	"59.4"	""	"55.6"	"2.0"	"73.1"	"60.2"	""	"276"	"24"	"31.000"	"24.000"	"0.0557030642295295"	"14"	"0.002525"	"0.02392"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTPYFL"	"[R].tTTPYFL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.29932"	"1071.59136"	"1071.59238"	"-0.95"	"-0.00051"	"6/54"	"6"	"54"	"2571310.00994873"	"HCD"	"MS2"	"55.09229"	"33.4"	"100.000"	"110.5567"	"39746"	"39746"	"39724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"42.9"	""	"49.6"	""	"57.2"	"0.9"	"59.8"	"58.6"	""	"350"	"25"	"32.000"	"25.000"	"0.0564986471299711"	"14"	"0.004634"	"0.05435"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTPYFL"	"[R].tTTPYFL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.29968"	"1071.59209"	"1071.59238"	"-0.27"	"-0.00014"	"5/54"	"5"	"54"	"2579957.53088379"	"HCD"	"MS2"	"45.62968"	"36.5"	"100.000"	"110.4131"	"39674"	"39674"	"39655"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.8"	""	"49.4"	""	"51.4"	""	"54.3"	""	"70.4"	"62.7"	""	"340"	"26"	"32.000"	"25.000"	"0.0470380079719958"	"14"	"0.004819"	"0.05793"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTLQPR"	"[K].dLTLQPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62921"	"RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3"	"Q62921"	"RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Rbck1 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"536.32159"	"1071.63591"	"1071.63597"	"-0.06"	"-0.00003"	"5/56"	"5"	"56"	"1196558.5824585"	"HCD"	"MS2"	"62.4675"	"45.5"	"100.000"	"48.4955"	"14744"	"14744"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.8"	""	"51.3"	""	"59.0"	""	"75.0"	"0.1"	"90.4"	"89.2"	""	"417"	"14"	"33.000"	"26.000"	"0.780020576547231"	"16"	"0.004392"	"0.05157"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQAGLAR"	"[R].dLQAGLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"536.81866"	"1072.63005"	"1072.63122"	"-1.09"	"-0.00059"	"7/66"	"7"	"66"	"3049291.4486084"	"HCD"	"MS2"	"31.31929"	"177.6"	"100.000"	"43.1090"	"12522"	"12522"	"12498"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.6"	""	"160.7"	""	"246.1"	""	"206.8"	""	"587.1"	"318.3"	""	"486"	"31"	"33.000"	"26.000"	"0.0213602471589905"	""	"0.001162"	"0.009243"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQAGLAR"	"[R].dLQAGLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"O35095"	"Neurochondrin OS=Rattus norvegicus OX=10116 GN=Ncdn PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"536.81885"	"1072.63042"	"1072.63122"	"-0.75"	"-0.00040"	"7/66"	"7"	"66"	"3201142.72149658"	"HCD"	"MS2"	"44.1919"	"179.9"	"100.000"	"42.9272"	"12482"	"12482"	"12459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.3"	""	"158.6"	""	"226.7"	""	"218.4"	""	"563.5"	"352.4"	""	"474"	"32"	"33.000"	"26.000"	"0.0150920538455176"	""	"0.001261"	"0.009821"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAANGIGR"	"[R].iAAAnGIGR.[L]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"536.81909"	"1072.63091"	"1072.63122"	"-0.30"	"-0.00016"	"8/74"	"8"	"74"	"3547165.01678467"	"HCD"	"MS2"	"25.3603"	"160.4"	"100.000"	"42.2537"	"12173"	"12173"	"12152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"253.3"	"2.5"	"202.1"	""	"214.5"	""	"243.2"	""	"276.9"	"328.9"	""	"474"	"47"	"33.000"	"26.000"	"0.000465316385610143"	""	"0"	"0.0001075"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAANGIGR"	"[R].iAAAnGIGR.[L]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"536.81915"	"1072.63103"	"1072.63122"	"-0.18"	"-0.00010"	"7/74"	"7"	"74"	"4079528.79785156"	"HCD"	"MS2"	"17.91035"	"183.9"	"100.000"	"42.1452"	"12163"	"12163"	"12145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.8"	""	"227.5"	""	"253.3"	""	"276.4"	""	"320.5"	"385.0"	""	"474"	"52"	"33.000"	"26.000"	"0.000143796510112476"	""	"0"	"2.373E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIEEIR"	"[R].iAIEEIR.[SL]"	"N-Term(TMT6plex)"	"1"	"1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"B3DMA2"	"Acyl-CoA dehydrogenase family member 11 OS=Rattus norvegicus OX=10116 GN=Acad11 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"536.83179"	"1072.65630"	"1072.65638"	"-0.07"	"-0.00004"	"5/50"	"5"	"50"	"1053798.55090332"	"HCD"	"MS2"	"45.76778"	"39.2"	"100.000"	"70.5221"	"23684"	"23684"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"54.5"	""	"57.7"	""	"64.5"	""	"65.6"	"76.7"	""	"399"	"37"	"32.000"	"26.000"	"0.00366389399497995"	"20"	"0.0001991"	"0.005609"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALEELR"	"[R].lALEELR.[SL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q4KLY4"	"E3 ubiquitin-protein ligase RING2 OS=Rattus norvegicus OX=10116 GN=Rnf2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"536.83179"	"1072.65630"	"1072.65638"	"-0.07"	"-0.00004"	"5/50"	"5"	"50"	"1053798.55090332"	"HCD"	"MS2"	"45.76778"	"39.2"	"100.000"	"70.5221"	"23684"	"23684"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"54.5"	""	"57.7"	""	"64.5"	""	"65.6"	"76.7"	""	"399"	"37"	"32.000"	"26.000"	"0.00366389399497995"	"20"	"0.0001991"	"0.005609"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGNQGAR"	"[R].iEGNQGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"537.29834"	"1073.58940"	"1073.59009"	"-0.64"	"-0.00034"	"7/64"	"7"	"64"	"2859449.22912598"	"HCD"	"MS2"	"0"	"153.2"	"100.000"	"21.5118"	"3920"	"3920"	"3899"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"286.6"	""	"221.2"	""	"176.5"	""	"252.9"	""	"251.0"	"261.6"	""	"515"	"34"	"34.000"	"27.000"	"0.0095670321492522"	""	"0.0001686"	"0.001655"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGNQGAR"	"[R].iEGNQGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"537.29852"	"1073.58977"	"1073.59009"	"-0.30"	"-0.00016"	"6/64"	"6"	"64"	"2913293.26391602"	"HCD"	"MS2"	"4.633115"	"153.8"	"100.000"	"21.5582"	"3902"	"3902"	"3881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.7"	""	"214.7"	""	"179.9"	""	"264.2"	""	"238.1"	"234.0"	""	"516"	"36"	"34.000"	"27.000"	"0.0071387094451617"	""	"0.0001991"	"0.002587"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGR"	"[R].vTLELGGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"537.32880"	"1073.65032"	"1073.65162"	"-1.22"	"-0.00065"	"6/60"	"6"	"60"	"1900623.31219482"	"HCD"	"MS2"	"13.21665"	"83.3"	"100.000"	"64.8777"	"21393"	"21393"	"21373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.1"	""	"127.5"	""	"126.6"	""	"128.3"	"0.1"	"148.2"	"134.7"	""	"615"	"39"	"34.000"	"27.000"	"0.00427410434098106"	""	"0.0001991"	"0.002072"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGR"	"[R].vTLELGGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"537.32898"	"1073.65068"	"1073.65162"	"-0.88"	"-0.00047"	"6/60"	"6"	"60"	"1712125.9854126"	"HCD"	"MS2"	"21.94878"	"73.1"	"100.000"	"65.1630"	"21509"	"21509"	"21492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.9"	""	"101.8"	""	"115.1"	""	"106.9"	""	"126.9"	"122.0"	""	"619"	"36"	"34.000"	"27.000"	"0.00764998622882492"	""	"0.0001991"	"0.002132"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILGSVER"	"[R].aILGSVER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"537.32898"	"1073.65068"	"1073.65162"	"-0.88"	"-0.00047"	"7/60"	"7"	"60"	"3903302.9085083"	"HCD"	"MS2"	"12.96208"	"154.9"	"100.000"	"51.6793"	"16033"	"16033"	"16015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.8"	""	"228.7"	""	"229.7"	""	"234.8"	"0.2"	"251.8"	"273.3"	""	"619"	"50"	"34.000"	"27.000"	"0.0003095"	""	"0.0001686"	"0.001042"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELSQLR"	"[K].vELSQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"537.32910"	"1073.65093"	"1073.65162"	"-0.65"	"-0.00035"	"6/56"	"6"	"56"	"6428212.73400879"	"HCD"	"MS2"	"9.275403"	"266.3"	"100.000"	"59.1963"	"19055"	"19055"	"19038"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.7"	""	"291.4"	""	"337.7"	""	"505.9"	""	"590.0"	"522.8"	""	"619"	"29"	"34.000"	"27.000"	"0.0357816738958454"	"23"	"0.004213"	"0.04759"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"537.32916"	"1073.65105"	"1073.65162"	"-0.54"	"-0.00029"	"6/54"	"6"	"54"	"2384427.45367432"	"HCD"	"MS2"	"15.69375"	"116.0"	"100.000"	"50.2046"	"15402"	"15402"	"15382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.2"	""	"145.5"	""	"160.9"	""	"190.9"	"8.8"	"193.4"	"222.2"	""	"619"	"20"	"34.000"	"27.000"	"0.308077976670298"	"20"	"0.00329"	"0.03548"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDLTLR"	"[R].nIDLTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"537.32922"	"1073.65117"	"1073.65162"	"-0.42"	"-0.00023"	"6/64"	"6"	"64"	"1529462.18133545"	"HCD"	"MS2"	"32.45583"	"63.4"	"100.000"	"74.6782"	"25367"	"25367"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.8"	""	"86.0"	""	"80.7"	""	"102.7"	""	"124.3"	"122.9"	""	"619"	"21"	"34.000"	"27.000"	"0.22472979382618"	"23"	"0.002373"	"0.02246"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGR"	"[R].vTLELGGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"537.32922"	"1073.65117"	"1073.65162"	"-0.42"	"-0.00023"	"7/60"	"7"	"60"	"1979036.63659668"	"HCD"	"MS2"	"7.816396"	"83.4"	"100.000"	"64.9365"	"21383"	"21383"	"21364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.0"	""	"125.4"	""	"132.3"	""	"121.6"	"0.6"	"141.9"	"141.5"	""	"619"	"39"	"34.000"	"27.000"	"0.00395968513636754"	"27"	"0.0001991"	"0.002058"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILGSVER"	"[R].aILGSVER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"537.32922"	"1073.65117"	"1073.65162"	"-0.42"	"-0.00023"	"7/60"	"7"	"60"	"2394252.77325439"	"HCD"	"MS2"	"12.2241"	"104.0"	"100.000"	"52.2078"	"16214"	"16214"	"16195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.9"	""	"144.9"	""	"158.9"	""	"149.3"	""	"179.4"	"195.3"	""	"619"	"44"	"34.000"	"27.000"	"0.00111342419230702"	"24"	"0.0001686"	"0.001312"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"537.32922"	"1073.65117"	"1073.65162"	"-0.42"	"-0.00023"	"6/54"	"6"	"54"	"2572865.80505371"	"HCD"	"MS2"	"10.10218"	"117.8"	"100.000"	"49.9017"	"15314"	"15314"	"15292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.9"	""	"149.4"	""	"154.7"	""	"197.0"	"4.5"	"213.7"	"221.5"	""	"619"	"15"	"34.000"	"27.000"	"0.94332349928986"	"19"	"0.005469"	"0.06937"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELSQLR"	"[K].vELSQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"537.32922"	"1073.65117"	"1073.65162"	"-0.42"	"-0.00023"	"5/56"	"5"	"56"	"6156914.24945068"	"HCD"	"MS2"	"7.462385"	"255.4"	"100.000"	"58.9773"	"19000"	"19000"	"18984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.3"	""	"292.6"	""	"331.9"	""	"481.9"	"2.5"	"581.7"	"469.8"	""	"619"	"29"	"34.000"	"27.000"	"0.0352095644962352"	"24"	"0.004819"	"0.05779"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"537.32928"	"1073.65129"	"1073.65162"	"-0.31"	"-0.00017"	"6/54"	"6"	"54"	"1908975.902771"	"HCD"	"MS2"	"11.00805"	"96.2"	"100.000"	"49.9145"	"15284"	"15284"	"15262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.5"	""	"130.3"	""	"143.9"	""	"142.0"	"1.7"	"165.5"	"187.0"	""	"619"	"18"	"34.000"	"27.000"	"0.536612337304906"	"20"	"0.00307"	"0.03436"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLELGGR"	"[R].vTLELGGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"537.32941"	"1073.65154"	"1073.65162"	"-0.08"	"-0.00004"	"6/60"	"6"	"60"	"1383396.87084961"	"HCD"	"MS2"	"14.74648"	"61.0"	"100.000"	"65.2424"	"21508"	"21508"	"21489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"83.3"	""	"87.7"	""	"84.7"	"0.6"	"120.5"	"110.0"	""	"619"	"36"	"34.000"	"27.000"	"0.00854398846500196"	"22"	"9.9E-05"	"0.0008636"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDLTLR"	"[R].nIDLTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"537.32959"	"1073.65190"	"1073.65162"	"0.26"	"0.00014"	"9/64"	"9"	"64"	"1691323.50457764"	"HCD"	"MS2"	"29.12092"	"70.8"	"100.000"	"74.5316"	"25277"	"25277"	"25262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.1"	""	"88.7"	""	"105.4"	""	"115.4"	""	"126.2"	"136.9"	""	"619"	"15"	"34.000"	"27.000"	"1.03910791608194"	"25"	"0.003818"	"0.04203"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVQLR"	"[K].sEIVQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"537.32965"	"1073.65203"	"1073.65162"	"0.37"	"0.00020"	"4/54"	"4"	"54"	"1693323.97253418"	"HCD"	"MS2"	"23.3405"	"89.3"	"100.000"	"49.5773"	"15182"	"15182"	"15157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.6"	""	"118.2"	""	"123.4"	""	"147.3"	"3.6"	"176.4"	"160.1"	""	"599"	"17"	"34.000"	"27.000"	"0.620007333962918"	"20"	"0.003317"	"0.03701"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDLQSR"	"[R].lLDLQSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"537.32965"	"1073.65203"	"1073.65162"	"0.37"	"0.00020"	"5/58"	"5"	"58"	"1227092.70812988"	"HCD"	"MS2"	"30.72722"	"48.1"	"100.000"	"70.7554"	"23745"	"23745"	"23727"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.4"	""	"64.3"	""	"62.3"	""	"74.5"	"1.7"	"88.6"	"83.7"	""	"599"	"13"	"34.000"	"27.000"	"1.56097815975972"	"23"	"0.003786"	"0.04082"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILGSVER"	"[R].aILGSVER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"537.32965"	"1073.65203"	"1073.65162"	"0.37"	"0.00020"	"7/60"	"7"	"60"	"3336028.77709961"	"HCD"	"MS2"	"7.587995"	"135.5"	"100.000"	"51.9038"	"16090"	"16090"	"16069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.7"	""	"186.0"	""	"214.1"	""	"200.9"	""	"234.9"	"235.5"	""	"599"	"54"	"34.000"	"27.000"	"0.000120059581929377"	""	"9.9E-05"	"0.0006659"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDLTLR"	"[R].nIDLTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"537.33026"	"1073.65325"	"1073.65162"	"1.51"	"0.00081"	"6/64"	"6"	"64"	"1518432.57788086"	"HCD"	"MS2"	"39.74389"	"57.1"	"100.000"	"74.3900"	"25250"	"25250"	"25233"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.3"	""	"73.9"	""	"86.6"	""	"97.7"	"0.1"	"102.9"	"95.9"	""	"572"	"10"	"34.000"	"27.000"	"2.78847036387173"	"20"	"0.006577"	"0.08167"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDGWR"	"[R].lAQDGWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"537.79767"	"1074.58806"	"1074.58936"	"-1.21"	"-0.00065"	"5/56"	"5"	"56"	"4794194.79150391"	"HCD"	"MS2"	"39.1883"	"251.5"	"100.000"	"48.5841"	"14743"	"14743"	"14728"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"329.9"	""	"333.2"	""	"375.2"	""	"376.4"	"0.2"	"477.2"	"491.8"	""	"521"	"24"	"34.000"	"27.000"	"0.113189913396694"	"23"	"0.002673"	"0.02819"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDGWR"	"[R].lAQDGWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"537.79791"	"1074.58855"	"1074.58936"	"-0.75"	"-0.00041"	"5/56"	"5"	"56"	"4442634.08355713"	"HCD"	"MS2"	"24.42406"	"255.6"	"100.000"	"48.5854"	"14780"	"14780"	"14766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.3"	""	"329.3"	""	"355.1"	""	"405.9"	"9.5"	"500.5"	"476.1"	""	"515"	"23"	"34.000"	"27.000"	"0.124674384652906"	""	"0.00212"	"0.019"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDGWR"	"[R].lAQDGWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"537.79803"	"1074.58879"	"1074.58936"	"-0.53"	"-0.00028"	"5/56"	"5"	"56"	"4244912.58679199"	"HCD"	"MS2"	"39.92817"	"228.6"	"100.000"	"48.2755"	"14656"	"14656"	"14639"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.2"	""	"294.8"	""	"308.0"	""	"334.9"	""	"445.8"	"463.3"	""	"515"	"25"	"34.000"	"27.000"	"0.0888745128789829"	"25"	"0.002525"	"0.02395"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQDGWR"	"[R].lAQDGWR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"537.79846"	"1074.58965"	"1074.58936"	"0.27"	"0.00014"	"5/56"	"5"	"56"	"4052972.19152832"	"HCD"	"MS2"	"27.31463"	"230.5"	"100.000"	"48.8831"	"14865"	"14865"	"14851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"310.8"	""	"301.9"	""	"327.1"	""	"364.8"	"5.5"	"437.2"	"438.0"	""	"568"	"22"	"34.000"	"27.000"	"0.168003504105835"	""	"0.00212"	"0.01913"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILEDLR"	"[R].sILEDLR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"537.81915"	"1074.63103"	"1074.63564"	"-4.29"	"-0.00231"	"5/56"	"5"	"56"	"33407293.9799805"	"HCD"	"MS2"	"1.350098"	"300.2"	"25.635"	"83.1115"	"28781"	"28781"	"28764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.7"	""	"354.2"	""	"291.6"	""	"644.7"	""	"670.8"	"534.8"	""	"759"	"37"	"35.000"	"28.000"	"0.00758947579525626"	""	"0.004213"	"0.04631"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEDIR"	"[R].sLLEDIR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q9QYJ4"	"ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus OX=10116 GN=Abcb9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"537.81915"	"1074.63103"	"1074.63564"	"-4.29"	"-0.00231"	"5/56"	"5"	"56"	"33407293.9799805"	"HCD"	"MS2"	"1.350098"	"300.2"	"25.635"	"83.1115"	"28781"	"28781"	"28764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.7"	""	"354.2"	""	"291.6"	""	"644.7"	""	"670.8"	"534.8"	""	"759"	"37"	"35.000"	"28.000"	"0.00758947579525626"	""	"0.004213"	"0.04631"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILEDLR"	"[R].sILEDLR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"537.82007"	"1074.63286"	"1074.63564"	"-2.59"	"-0.00139"	"5/56"	"5"	"56"	"28538496.5067139"	"HCD"	"MS2"	"1.338489"	"426.9"	"44.885"	"83.0429"	"28724"	"28724"	"28706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"499.8"	""	"472.4"	""	"407.7"	""	"934.7"	""	"978.9"	"768.4"	""	"679"	"37"	"35.000"	"28.000"	"0.00661972241617856"	""	"0.00296"	"0.03183"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEDIR"	"[R].sLLEDIR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q9QYJ4"	"ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus OX=10116 GN=Abcb9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"537.82007"	"1074.63286"	"1074.63564"	"-2.59"	"-0.00139"	"5/56"	"5"	"56"	"28538496.5067139"	"HCD"	"MS2"	"1.338489"	"426.9"	"44.885"	"83.0429"	"28724"	"28724"	"28706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"499.8"	""	"472.4"	""	"407.7"	""	"934.7"	""	"978.9"	"768.4"	""	"679"	"37"	"35.000"	"28.000"	"0.00661972241617856"	""	"0.00296"	"0.03183"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEELTR"	"[K].vVEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.1724"	"0.0000"	"1"	"1"	"1"	"537.82104"	"1074.63481"	"1074.63564"	"-0.77"	"-0.00041"	"6/54"	"6"	"54"	"2862775.15301514"	"HCD"	"MS2"	"16.10314"	"170.6"	"100.000"	"51.7747"	"16038"	"16038"	"16022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.6"	""	"232.0"	""	"239.8"	""	"265.1"	"6.9"	"305.8"	"307.8"	""	"682"	"29"	"35.000"	"28.000"	"0.0476161611120074"	""	"0.002628"	"0.02729"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEELTR"	"[K].vVEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"537.82117"	"1074.63506"	"1074.63564"	"-0.54"	"-0.00029"	"6/54"	"6"	"54"	"2860354.12548828"	"HCD"	"MS2"	"21.28117"	"159.2"	"100.000"	"51.4890"	"15956"	"15956"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.0"	""	"219.8"	""	"217.5"	""	"253.7"	"5.6"	"287.2"	"288.1"	""	"682"	"36"	"35.000"	"28.000"	"0.00823672144545724"	""	"0.001951"	"0.01726"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILEDLR"	"[R].sILEDLR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"537.82147"	"1074.63567"	"1074.63564"	"0.03"	"0.00001"	"5/56"	"5"	"56"	"5274221.01611328"	"HCD"	"MS2"	"5.59552"	"199.0"	"100.000"	"82.7461"	"28604"	"28604"	"28586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.4"	""	"227.8"	""	"186.4"	""	"448.6"	""	"441.5"	"347.6"	""	"682"	"42"	"35.000"	"28.000"	"0.00232677494702309"	""	"0.0001991"	"0.005926"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEDIR"	"[R].sLLEDIR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q9QYJ4"	"ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus OX=10116 GN=Abcb9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"537.82147"	"1074.63567"	"1074.63564"	"0.03"	"0.00001"	"5/56"	"5"	"56"	"5274221.01611328"	"HCD"	"MS2"	"5.59552"	"199.0"	"100.000"	"82.7461"	"28604"	"28604"	"28586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.4"	""	"227.8"	""	"186.4"	""	"448.6"	""	"441.5"	"347.6"	""	"682"	"42"	"35.000"	"28.000"	"0.00232677494702309"	""	"0.0001991"	"0.005926"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILEDLR"	"[R].sILEDLR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"537.82147"	"1074.63567"	"1074.63564"	"0.03"	"0.00001"	"5/56"	"5"	"56"	"6929281.75769043"	"HCD"	"MS2"	"2.091562"	"232.4"	"100.000"	"82.8199"	"28663"	"28663"	"28646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"271.1"	""	"272.7"	""	"218.2"	""	"526.9"	""	"520.5"	"401.7"	""	"682"	"38"	"35.000"	"28.000"	"0.00520900025859183"	""	"0.002166"	"0.02003"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLEDIR"	"[R].sLLEDIR.[SH]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q9QYJ4"	"ATP-binding cassette sub-family B member 9 OS=Rattus norvegicus OX=10116 GN=Abcb9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"537.82147"	"1074.63567"	"1074.63564"	"0.03"	"0.00001"	"5/56"	"5"	"56"	"6929281.75769043"	"HCD"	"MS2"	"2.091562"	"232.4"	"100.000"	"82.8199"	"28663"	"28663"	"28646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"271.1"	""	"272.7"	""	"218.2"	""	"526.9"	""	"520.5"	"401.7"	""	"682"	"38"	"35.000"	"28.000"	"0.00520900025859183"	""	"0.002166"	"0.02003"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANVGAGK"	"[K].aNVGAGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"P62850"	"40S ribosomal protein S24 OS=Rattus norvegicus OX=10116 GN=Rps24 PE=2 SV=1"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"537.83716"	"1074.66704"	"1074.66716"	"-0.12"	"-0.00006"	"6/60"	"6"	"60"	"9758165.39630127"	"HCD"	"MS2"	"9.848874"	"440.2"	"65.255"	"28.1949"	"6491"	"6491"	"6474"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"585.2"	""	"645.9"	""	"687.7"	""	"752.7"	""	"785.9"	"714.7"	""	"620"	"23"	"34.000"	"27.000"	"0.143008448113718"	""	"0.003904"	"0.04267"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAAGVK"	"[K].aTAAGVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"538.34680"	"1075.68633"	"1075.68757"	"-1.15"	"-0.00062"	"6/48"	"6"	"48"	"5294084.62030029"	"HCD"	"MS2"	"37.78567"	"363.9"	"100.000"	"29.3971"	"7019"	"7019"	"7000"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"564.6"	""	"459.4"	""	"468.4"	""	"633.1"	""	"664.1"	"660.2"	""	"195"	"27"	"29.000"	"22.000"	"0.0183655786225256"	"19"	"0.001615"	"0.01327"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAAGVK"	"[K].aTAAGVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"538.34686"	"1075.68645"	"1075.68757"	"-1.04"	"-0.00056"	"6/48"	"6"	"48"	"6425874.1194458"	"HCD"	"MS2"	"20.17043"	"439.2"	"100.000"	"29.6162"	"7068"	"7068"	"7047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"632.9"	""	"587.2"	""	"577.4"	""	"751.7"	"4.9"	"823.0"	"784.2"	""	"195"	"28"	"29.000"	"22.000"	"0.0142890914493201"	"20"	"0.002035"	"0.01822"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"538.80188"	"1076.59648"	"1076.59715"	"-0.62"	"-0.00033"	"5/54"	"5"	"54"	"1337028.26226807"	"HCD"	"MS2"	"14.4562"	"71.6"	"100.000"	"79.9034"	"27455"	"27455"	"27431"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.5"	""	"106.4"	""	"110.9"	""	"88.5"	""	"114.2"	"140.5"	""	"732"	"39"	"35.000"	"28.000"	"0.00498288753782538"	"25"	"0.0001991"	"0.00392"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"538.80194"	"1076.59661"	"1076.59715"	"-0.50"	"-0.00027"	"6/54"	"6"	"54"	"449518.318969727"	"HCD"	"MS2"	"23.83341"	"26.5"	"100.000"	"81.1795"	"28000"	"28000"	"27976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.7"	""	"39.0"	""	"36.6"	""	"46.6"	""	"48.2"	"52.3"	""	"732"	"32"	"35.000"	"28.000"	"0.0257917663241976"	"19"	"0.002189"	"0.02121"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"538.80200"	"1076.59673"	"1076.59715"	"-0.39"	"-0.00021"	"6/54"	"6"	"54"	"16028861.2977295"	"HCD"	"MS2"	"0.1118102"	"445.6"	"63.814"	"80.4811"	"27690"	"27690"	"27673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"712.9"	""	"649.9"	""	"761.3"	""	"571.6"	""	"663.0"	"862.7"	""	"732"	"46"	"35.000"	"28.000"	"0.000838457560913004"	"26"	"0.00212"	"0.01932"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"538.80212"	"1076.59697"	"1076.59715"	"-0.16"	"-0.00009"	"6/54"	"6"	"54"	"2254532.42651367"	"HCD"	"MS2"	"1.060174"	"102.8"	"100.000"	"80.8613"	"27872"	"27872"	"27859"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.2"	""	"158.5"	""	"167.9"	""	"135.5"	""	"159.5"	"199.6"	""	"732"	"46"	"35.000"	"28.000"	"0.000886096631105441"	"26"	"0.0001991"	"0.005334"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"538.80225"	"1076.59722"	"1076.59715"	"0.06"	"0.00003"	"6/54"	"6"	"54"	"2473040.69580078"	"HCD"	"MS2"	"2.071421"	"111.3"	"100.000"	"80.7877"	"27815"	"27815"	"27798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.6"	""	"166.4"	""	"178.4"	""	"143.5"	""	"170.3"	"213.7"	""	"732"	"46"	"35.000"	"28.000"	"0.00087192892578528"	"26"	"0.0001991"	"0.002763"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"538.80225"	"1076.59722"	"1076.59715"	"0.06"	"0.00003"	"6/54"	"6"	"54"	"13282181.7044678"	"HCD"	"MS2"	"0"	"550.3"	"100.000"	"80.2529"	"27625"	"27625"	"27610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"886.2"	""	"850.2"	""	"887.7"	""	"694.7"	""	"836.4"	"1051.3"	""	"732"	"44"	"35.000"	"28.000"	"0.00150134701693098"	"26"	"0.0009352"	"0.008296"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"538.80231"	"1076.59734"	"1076.59715"	"0.18"	"0.00010"	"6/54"	"6"	"54"	"13487120.4154663"	"HCD"	"MS2"	"0.2248891"	"514.0"	"88.140"	"80.1864"	"27571"	"27571"	"27556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"845.2"	""	"773.2"	""	"837.0"	""	"653.3"	""	"763.6"	"987.2"	""	"732"	"42"	"35.000"	"28.000"	"0.00231462737603696"	"25"	"0.002189"	"0.02129"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"538.80249"	"1076.59770"	"1076.59715"	"0.52"	"0.00028"	"6/54"	"6"	"54"	"17428346.7250977"	"HCD"	"MS2"	"0.1774491"	"344.5"	"47.890"	"80.5593"	"27749"	"27749"	"27732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"537.8"	""	"530.6"	""	"576.6"	""	"430.5"	""	"536.8"	"649.1"	""	"740"	"46"	"35.000"	"28.000"	"0.000841786049385666"	"26"	"0.00212"	"0.01941"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLMER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"538.80267"	"1076.59807"	"1076.59715"	"0.86"	"0.00046"	"6/54"	"6"	"54"	"1318160.18737793"	"HCD"	"MS2"	"23.31766"	"75.1"	"100.000"	"79.9742"	"27511"	"27511"	"27493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.5"	""	"103.4"	""	"115.3"	""	"106.1"	""	"135.5"	"144.5"	""	"746"	"43"	"35.000"	"28.000"	"0.00182267330034877"	"21"	"0.0001991"	"0.005893"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELR"	"[K].tEVTELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.0800"	"0.0000"	"1"	"1"	"1"	"538.81104"	"1076.61479"	"1076.61490"	"-0.10"	"-0.00006"	"6/56"	"6"	"56"	"7809042.37475586"	"HCD"	"MS2"	"42.15707"	"454.3"	"100.000"	"37.7027"	"10364"	"10364"	"10350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"607.5"	""	"551.5"	""	"635.8"	""	"756.0"	"3.2"	"818.8"	"933.8"	""	"728"	"25"	"35.000"	"28.000"	"0.12333927283467"	""	"0.004234"	"0.04784"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVTELR"	"[K].tEVTELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"538.81116"	"1076.61504"	"1076.61490"	"0.12"	"0.00007"	"6/56"	"6"	"56"	"7587495.15948486"	"HCD"	"MS2"	"41.22533"	"433.2"	"100.000"	"37.7971"	"10367"	"10367"	"10349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"574.9"	""	"530.1"	""	"596.6"	""	"706.5"	"4.1"	"786.4"	"908.8"	""	"731"	"24"	"35.000"	"28.000"	"0.148555036809885"	""	"0.002834"	"0.03068"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPVTFR"	"[K].dLPVTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"538.81787"	"1076.62847"	"1076.63016"	"-1.57"	"-0.00085"	"5/56"	"5"	"56"	"3091149.79327393"	"HCD"	"MS2"	"11.69455"	"126.2"	"100.000"	"77.0007"	"26278"	"26278"	"26268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.9"	""	"147.0"	""	"125.4"	""	"239.2"	""	"291.8"	"290.8"	""	"587"	"30"	"34.000"	"27.000"	"0.0277081867189919"	""	"0.002189"	"0.02079"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPVTFR"	"[K].dLPVTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"538.81812"	"1076.62895"	"1076.63016"	"-1.12"	"-0.00060"	"10/56"	"10"	"56"	"12309345.7654419"	"HCD"	"MS2"	"1.7446"	"425.0"	"100.000"	"77.2758"	"26388"	"26388"	"26372"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"376.2"	""	"467.0"	""	"413.3"	""	"767.1"	""	"1002.1"	"1033.8"	""	"588"	"30"	"34.000"	"27.000"	"0.029946586808791"	"27"	"0.002673"	"0.02804"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPVTFR"	"[K].dLPVTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"538.81812"	"1076.62895"	"1076.63016"	"-1.12"	"-0.00060"	"10/56"	"10"	"56"	"12156428.810791"	"HCD"	"MS2"	"1.030033"	"427.0"	"99.976"	"77.3519"	"26448"	"26448"	"26437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"364.0"	""	"456.4"	""	"411.9"	""	"778.6"	""	"982.2"	"1078.8"	""	"588"	"30"	"34.000"	"27.000"	"0.029603791064243"	"27"	"0.004234"	"0.04817"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPVTFR"	"[K].dLPVTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"538.81824"	"1076.62920"	"1076.63016"	"-0.89"	"-0.00048"	"10/56"	"10"	"56"	"3852848.83825684"	"HCD"	"MS2"	"14.29704"	"157.1"	"100.000"	"77.0860"	"26343"	"26343"	"26334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.4"	""	"180.3"	""	"148.2"	""	"290.5"	""	"356.5"	"379.3"	""	"588"	"28"	"34.000"	"27.000"	"0.0508566009609239"	"25"	"0.002189"	"0.0209"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFIPVER"	"[K].sFIPVER.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1;Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"538.81830"	"1076.62932"	"1076.63016"	"-0.78"	"-0.00042"	"6/58"	"6"	"58"	"3763414.78692627"	"HCD"	"MS2"	"5.08232"	"168.8"	"100.000"	"62.5723"	"20457"	"20457"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"240.8"	""	"251.4"	""	"228.8"	""	"273.5"	""	"304.0"	"305.0"	""	"588"	"43"	"34.000"	"27.000"	"0.00151477221507036"	"25"	"0.002755"	"0.02906"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFIPVER"	"[K].sFIPVER.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1;Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"538.81848"	"1076.62969"	"1076.63016"	"-0.44"	"-0.00024"	"6/58"	"6"	"58"	"1922651.98272705"	"HCD"	"MS2"	"19.41807"	"87.4"	"100.000"	"62.8900"	"20586"	"20586"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.1"	""	"118.4"	""	"125.5"	""	"135.0"	""	"177.3"	"156.9"	""	"588"	"27"	"34.000"	"27.000"	"0.0562791241956199"	"17"	"0.006305"	"0.07843"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFIPVER"	"[K].sFIPVER.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1;Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"538.81866"	"1076.63005"	"1076.63016"	"-0.10"	"-0.00005"	"6/58"	"6"	"58"	"989040.683532715"	"HCD"	"MS2"	"26.37837"	"51.9"	"100.000"	"62.2519"	"20327"	"20327"	"20297"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.7"	""	"72.0"	""	"67.2"	""	"76.5"	"1.8"	"104.7"	"90.7"	""	"638"	"40"	"35.000"	"28.000"	"0.00321951670658462"	"23"	"0.000264"	"0.006044"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFIPVER"	"[K].sFIPVER.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1;Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"538.81885"	"1076.63042"	"1076.63016"	"0.24"	"0.00013"	"6/58"	"6"	"58"	"2170794.35040283"	"HCD"	"MS2"	"13.99006"	"101.5"	"100.000"	"62.9196"	"20565"	"20565"	"20545"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.8"	""	"145.9"	""	"140.1"	""	"157.7"	""	"190.8"	"188.6"	""	"638"	"25"	"35.000"	"28.000"	"0.105387883590744"	"21"	"0.00212"	"0.01934"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFIPVER"	"[K].sFIPVER.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1;Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"538.81891"	"1076.63054"	"1076.63016"	"0.35"	"0.00019"	"6/58"	"6"	"58"	"3620069.50616455"	"HCD"	"MS2"	"7.652208"	"147.3"	"100.000"	"62.6294"	"20447"	"20447"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"210.2"	""	"221.1"	""	"216.5"	""	"227.6"	""	"263.5"	"256.7"	""	"638"	"43"	"35.000"	"28.000"	"0.00161358067178993"	"25"	"0.001103"	"0.009068"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFIPVER"	"[K].sFIPVER.[S]"	"N-Term(TMT6plex)"	"2"	"2"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1;Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O55171; O88267"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1; Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"538.81903"	"1076.63078"	"1076.63016"	"0.58"	"0.00031"	"6/58"	"6"	"58"	"1034421.02728271"	"HCD"	"MS2"	"25.10021"	"58.3"	"100.000"	"62.3318"	"20326"	"20326"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.2"	""	"86.4"	""	"80.4"	""	"88.3"	""	"118.9"	"98.2"	""	"636"	"42"	"35.000"	"28.000"	"0.00183411735358736"	"25"	"0.001348"	"0.01084"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADFGLAR"	"[K].vADFGLAR.[DVL]"	"N-Term(TMT6plex)"	"1"	"3"	"Q9WUD9"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"P97523; Q62662; Q9WUD9"	"Hepatocyte growth factor receptor OS=Rattus norvegicus OX=10116 GN=Met PE=1 SV=1; Tyrosine-protein kinase FRK OS=Rattus norvegicus OX=10116 GN=Frk PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"539.31622"	"1077.62517"	"1077.62541"	"-0.22"	"-0.00012"	"7/56"	"7"	"56"	"1618240.01165771"	"HCD"	"MS2"	"16.00265"	"83.6"	"100.000"	"72.8020"	"24603"	"24603"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.3"	""	"112.5"	""	"116.5"	""	"131.7"	""	"160.6"	"157.3"	""	"541"	"35"	"34.000"	"27.000"	"0.00771200441359806"	""	"0.0001686"	"0.001324"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADFGLAR"	"[K].vADFGLAR.[DVL]"	"N-Term(TMT6plex)"	"1"	"3"	"Q9WUD9"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"P97523; Q62662; Q9WUD9"	"Hepatocyte growth factor receptor OS=Rattus norvegicus OX=10116 GN=Met PE=1 SV=1; Tyrosine-protein kinase FRK OS=Rattus norvegicus OX=10116 GN=Frk PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"539.31628"	"1077.62529"	"1077.62541"	"-0.11"	"-0.00006"	"7/56"	"7"	"56"	"1666420.95196533"	"HCD"	"MS2"	"18.41356"	"96.4"	"100.000"	"72.6163"	"24498"	"24498"	"24480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.3"	""	"133.3"	""	"137.5"	""	"156.7"	""	"175.1"	"185.1"	""	"541"	"34"	"34.000"	"27.000"	"0.0118622553748134"	""	"0.0001686"	"0.001422"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"539.80768"	"1078.60808"	"1078.60943"	"-1.25"	"-0.00067"	"6/50"	"6"	"50"	"6302459.859375"	"HCD"	"MS2"	"0"	"259.3"	"100.000"	"50.7957"	"15644"	"15644"	"15621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"326.1"	""	"377.5"	""	"301.5"	""	"367.8"	""	"526.7"	"563.6"	""	"609"	"34"	"34.000"	"27.000"	"0.0122345301903502"	"20"	"0.003043"	"0.03286"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"539.80786"	"1078.60845"	"1078.60943"	"-0.91"	"-0.00049"	"5/54"	"5"	"54"	"1166455.95166016"	"HCD"	"MS2"	"0"	"62.0"	"100.000"	"82.0838"	"28339"	"28339"	"28327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.5"	""	"70.2"	""	"80.6"	""	"104.7"	""	"131.7"	"125.3"	""	"608"	"36"	"34.000"	"27.000"	"0.00744515225520803"	""	"0.0003938"	"0.00629"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"539.80798"	"1078.60869"	"1078.60943"	"-0.68"	"-0.00037"	"6/52"	"6"	"52"	"1353127.34594727"	"HCD"	"MS2"	"2.328428"	"68.5"	"100.000"	"73.6515"	"24920"	"24920"	"24905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.0"	""	"73.1"	""	"78.6"	""	"125.2"	""	"151.3"	"148.5"	""	"608"	"31"	"34.000"	"27.000"	"0.0243710131269854"	""	"0.0005778"	"0.007109"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADFVR"	"[K].eLADFVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.2927"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/54"	"6"	"54"	"1233006.3616333"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"78.7691"	"26994"	"26994"	"26977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.3"	""	"85.3"	""	"87.7"	""	"122.3"	"1.2"	"130.5"	"115.4"	""	"608"	"41"	"34.000"	"27.000"	"0.00225358313355479"	""	"0.0001991"	"0.002454"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/54"	"6"	"54"	"755298.552124023"	"HCD"	"MS2"	"42.83223"	"43.3"	"100.000"	"81.8436"	"28270"	"28270"	"28243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.9"	""	"53.5"	""	"56.3"	""	"72.3"	"0.5"	"85.5"	"87.7"	""	"608"	"32"	"34.000"	"27.000"	"0.0198551688004832"	""	"0.001488"	"0.0128"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/58"	"6"	"58"	"1861061.90203857"	"HCD"	"MS2"	"0"	"89.7"	"100.000"	"65.5175"	"21654"	"21654"	"21632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.4"	""	"111.0"	""	"118.8"	""	"140.0"	""	"182.7"	"193.0"	""	"608"	"35"	"34.000"	"27.000"	"0.00963548508765221"	"26"	"0.001488"	"0.01275"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"5/58"	"5"	"58"	"1356134.09289551"	"HCD"	"MS2"	"55.1702"	"64.7"	"100.000"	"64.6135"	"21286"	"21286"	"21259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.0"	""	"93.6"	""	"85.3"	""	"108.8"	""	"119.4"	"138.4"	""	"608"	"18"	"34.000"	"27.000"	"0.509182634312037"	"18"	"0.002189"	"0.02068"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/58"	"6"	"58"	"1500473.80615234"	"HCD"	"MS2"	"18.40375"	"70.9"	"100.000"	"64.6675"	"21274"	"21274"	"21247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.7"	""	"92.4"	""	"87.2"	""	"120.1"	""	"127.0"	"156.3"	""	"608"	"20"	"34.000"	"27.000"	"0.331797862280422"	"22"	"0.00212"	"0.01957"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/58"	"6"	"58"	"14206396.0109863"	"HCD"	"MS2"	"0.1877695"	"373.6"	"63.558"	"65.2701"	"21520"	"21520"	"21503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"395.4"	"2.6"	"469.4"	""	"497.6"	""	"628.9"	""	"723.0"	"835.3"	""	"608"	"35"	"34.000"	"27.000"	"0.00905468994546474"	"26"	"0.002525"	"0.02396"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"539.80804"	"1078.60881"	"1078.60943"	"-0.57"	"-0.00031"	"6/58"	"6"	"58"	"14360702.9735718"	"HCD"	"MS2"	"0"	"565.3"	"100.000"	"64.9640"	"21395"	"21395"	"21379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"600.6"	""	"781.8"	""	"743.6"	""	"951.7"	""	"1097.1"	"1195.6"	""	"608"	"34"	"34.000"	"27.000"	"0.0116378721968314"	"26"	"0.002373"	"0.02237"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"539.80811"	"1078.60893"	"1078.60943"	"-0.46"	"-0.00025"	"6/50"	"6"	"50"	"5110541.65930176"	"HCD"	"MS2"	"6.222303"	"217.9"	"100.000"	"50.4679"	"15545"	"15545"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"269.8"	""	"319.1"	""	"259.7"	""	"314.0"	""	"437.6"	"471.8"	""	"608"	"34"	"34.000"	"27.000"	"0.0123274594776309"	"20"	"0.002559"	"0.02594"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"539.80811"	"1078.60893"	"1078.60943"	"-0.46"	"-0.00025"	"6/50"	"6"	"50"	"3349488.70373535"	"HCD"	"MS2"	"16.15815"	"160.9"	"100.000"	"51.0521"	"15783"	"15783"	"15766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.4"	""	"223.7"	""	"212.7"	""	"230.6"	"1.3"	"330.3"	"332.2"	""	"608"	"30"	"34.000"	"27.000"	"0.0305403200244632"	"21"	"0.002588"	"0.02635"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"539.80811"	"1078.60893"	"1078.60943"	"-0.46"	"-0.00025"	"6/50"	"6"	"50"	"14058797.4625244"	"HCD"	"MS2"	"0"	"416.5"	"69.167"	"51.0923"	"15765"	"15765"	"15747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"475.2"	""	"605.2"	""	"501.2"	""	"603.8"	""	"855.0"	"920.1"	""	"608"	"34"	"34.000"	"27.000"	"0.0119915019830885"	"23"	"0.003818"	"0.04131"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVAEEFR"	"[K].vVAEEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"539.80817"	"1078.60906"	"1078.60943"	"-0.34"	"-0.00018"	"6/50"	"6"	"50"	"14842710.1505737"	"HCD"	"MS2"	"0"	"498.4"	"78.973"	"50.7460"	"15657"	"15657"	"15644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"600.4"	""	"701.4"	""	"608.6"	""	"694.0"	""	"1015.9"	"1125.4"	""	"624"	"34"	"34.000"	"27.000"	"0.0122505219844675"	"23"	"0.003818"	"0.04168"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"539.80817"	"1078.60906"	"1078.60943"	"-0.34"	"-0.00018"	"6/58"	"6"	"58"	"12978137.065918"	"HCD"	"MS2"	"0"	"526.2"	"100.000"	"64.9098"	"21406"	"21406"	"21388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"604.6"	""	"706.0"	""	"670.2"	""	"898.8"	""	"1027.1"	"1096.7"	""	"624"	"34"	"34.000"	"27.000"	"0.0118892536898857"	""	"0.00296"	"0.0319"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADFVR"	"[K].eLADFVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"539.80823"	"1078.60918"	"1078.60943"	"-0.23"	"-0.00012"	"5/54"	"5"	"54"	"386456.717773438"	"HCD"	"MS2"	"6.987694"	"24.4"	"100.000"	"79.1098"	"27159"	"27159"	"27134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"28.1"	""	"31.9"	""	"43.0"	""	"46.1"	"54.6"	""	"608"	"24"	"34.000"	"27.000"	"0.109363797887346"	""	"0.003208"	"0.0345"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.3171"	"0.0000"	"1"	"1"	"1"	"539.80823"	"1078.60918"	"1078.60943"	"-0.23"	"-0.00012"	"6/52"	"6"	"52"	"1283663.94488525"	"HCD"	"MS2"	"16.31567"	"73.4"	"100.000"	"73.4614"	"24872"	"24872"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.9"	""	"72.9"	""	"93.9"	""	"133.3"	"0.6"	"149.1"	"150.1"	""	"608"	"41"	"34.000"	"27.000"	"0.00247100476913886"	""	"0.001615"	"0.01335"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.2927"	"0.0000"	"1"	"1"	"1"	"539.80829"	"1078.60930"	"1078.60943"	"-0.12"	"-0.00006"	"6/52"	"6"	"52"	"1344044.81781006"	"HCD"	"MS2"	"1.9436"	"71.2"	"100.000"	"73.7609"	"24994"	"24994"	"24976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.0"	""	"76.1"	""	"87.9"	""	"130.4"	""	"154.3"	"141.7"	""	"585"	"41"	"34.000"	"27.000"	"0.00214845306435956"	""	"0.0001991"	"0.005835"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADFVR"	"[K].eLADFVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.1714"	"0.0000"	"1"	"1"	"1"	"539.80829"	"1078.60930"	"1078.60943"	"-0.12"	"-0.00006"	"9/54"	"9"	"54"	"1460977.73565674"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"78.8032"	"27034"	"27034"	"27015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.3"	""	"78.0"	""	"94.2"	""	"143.7"	""	"143.4"	"135.5"	""	"585"	"35"	"34.000"	"27.000"	"0.00918598792958793"	""	"0.0007633"	"0.007329"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"539.80841"	"1078.60954"	"1078.60943"	"0.11"	"0.00006"	"6/58"	"6"	"58"	"1124320.93621826"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"65.5900"	"21650"	"21650"	"21631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"75.4"	""	"77.3"	""	"85.0"	""	"117.5"	"129.3"	""	"585"	"36"	"34.000"	"27.000"	"0.00656335462706458"	"27"	"0.000264"	"0.006026"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"539.80841"	"1078.60954"	"1078.60943"	"0.11"	"0.00006"	"6/54"	"6"	"54"	"1122924.12054443"	"HCD"	"MS2"	"7.730568"	"58.9"	"100.000"	"82.1598"	"28399"	"28399"	"28382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.1"	""	"67.4"	""	"81.0"	""	"96.2"	"0.9"	"115.2"	"122.8"	""	"585"	"44"	"34.000"	"27.000"	"0.00122215382244137"	""	"0.0001686"	"0.00127"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDIEIGR"	"[K].fDIEIGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"Q9JIH7; Q7TPK6"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2; Serine/threonine-protein kinase WNK4 OS=Rattus norvegicus OX=10116 GN=Wnk4 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"539.80847"	"1078.60967"	"1078.60943"	"0.22"	"0.00012"	"6/52"	"6"	"52"	"634125.557128906"	"HCD"	"MS2"	"47.4191"	"32.7"	"100.000"	"92.0938"	"32402"	"32402"	"32382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"44.2"	""	"43.5"	""	"72.6"	""	"50.0"	"61.4"	""	"585"	"19"	"34.000"	"27.000"	"0.39822256962129"	"23"	"0.002035"	"0.01854"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADFVR"	"[K].eLADFVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"539.80847"	"1078.60967"	"1078.60943"	"0.22"	"0.00012"	"6/54"	"6"	"54"	"966116.837768555"	"HCD"	"MS2"	"15.93763"	"51.0"	"100.000"	"78.4761"	"26874"	"26874"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"64.5"	""	"63.0"	""	"92.7"	"0.5"	"94.3"	"103.0"	""	"585"	"29"	"34.000"	"27.000"	"0.040190727769116"	""	"0.001718"	"0.01496"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DADFLLR"	"[K].dADFLLR.[V]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"Q4V8Q1"	"Calpain 11 OS=Rattus norvegicus OX=10116 GN=Capn11 PE=2 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"539.80872"	"1078.61016"	"1078.60943"	"0.68"	"0.00036"	"5/52"	"5"	"52"	"1189428.87872314"	"HCD"	"MS2"	"6.513254"	"68.6"	"100.000"	"73.3522"	"24798"	"24798"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.5"	""	"75.7"	""	"81.0"	""	"127.6"	"3.2"	"135.7"	"136.3"	""	"589"	"24"	"34.000"	"27.000"	"0.109165472564969"	""	"0.00452"	"0.05266"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EGDFLLR"	"[K].eGDFLLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"539.80872"	"1078.61016"	"1078.60943"	"0.68"	"0.00036"	"5/52"	"5"	"52"	"1189428.87872314"	"HCD"	"MS2"	"6.513254"	"68.6"	"100.000"	"73.3522"	"24798"	"24798"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.5"	""	"75.7"	""	"81.0"	""	"127.6"	"3.2"	"135.7"	"136.3"	""	"589"	"24"	"34.000"	"27.000"	"0.109165472564969"	""	"0.004234"	"0.04784"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDLPTR"	"[R].tFDLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"539.80872"	"1078.61016"	"1078.60943"	"0.68"	"0.00036"	"6/58"	"6"	"58"	"15862889.1314697"	"HCD"	"MS2"	"0"	"511.9"	"82.992"	"65.1949"	"21522"	"21522"	"21505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"558.6"	""	"646.4"	""	"677.8"	""	"844.8"	""	"982.4"	"1162.2"	""	"589"	"34"	"34.000"	"27.000"	"0.0112482587762394"	"26"	"0.003208"	"0.03464"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADFVR"	"[K].eLADFVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"1"	"539.80890"	"1078.61052"	"1078.60943"	"1.02"	"0.00055"	"6/54"	"6"	"54"	"716670.633483887"	"HCD"	"MS2"	"39.02341"	"42.1"	"100.000"	"78.5150"	"26917"	"26917"	"26887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.1"	""	"45.5"	""	"63.4"	""	"77.8"	""	"79.5"	"76.3"	""	"594"	"34"	"34.000"	"27.000"	"0.0119882681711379"	""	"0.0001991"	"0.004005"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDIIDR"	"[R].aFDIIDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"539.80902"	"1078.61077"	"1078.60943"	"1.24"	"0.00067"	"6/54"	"6"	"54"	"740049.853820801"	"HCD"	"MS2"	"33.52677"	"39.0"	"100.000"	"81.7909"	"28220"	"28220"	"28199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.7"	""	"53.2"	""	"49.1"	""	"62.0"	"1.7"	"76.6"	"76.1"	""	"549"	"29"	"34.000"	"27.000"	"0.0333075239452636"	""	"0.0001991"	"0.005607"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTLEIR"	"[R].sMTLEIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"539.80927"	"1078.61125"	"1078.61280"	"-1.43"	"-0.00077"	"4/56"	"4"	"56"	"969612.827697754"	"HCD"	"MS2"	"17.43043"	"56.7"	"100.000"	"61.1229"	"19871"	"19871"	"19848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.2"	""	"81.7"	""	"85.2"	""	"78.6"	""	"115.4"	"109.2"	""	"549"	"24"	"34.000"	"27.000"	"0.109532335698408"	"26"	"0.003357"	"0.03732"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTLEIR"	"[R].sMTLEIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"539.80939"	"1078.61150"	"1078.61280"	"-1.20"	"-0.00065"	"4/56"	"4"	"56"	"1383794.85321045"	"HCD"	"MS2"	"30.76359"	"80.5"	"100.000"	"60.7983"	"19739"	"19739"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.6"	""	"111.8"	""	"110.7"	""	"113.5"	""	"154.8"	"162.3"	""	"549"	"23"	"34.000"	"27.000"	"0.126923590374097"	"26"	"0.004819"	"0.05699"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTLEIR"	"[R].sMTLEIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"539.80951"	"1078.61174"	"1078.61280"	"-0.98"	"-0.00053"	"4/56"	"4"	"56"	"1012132.08087158"	"HCD"	"MS2"	"6.094528"	"56.4"	"100.000"	"61.2036"	"19872"	"19872"	"19849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.8"	""	"75.1"	""	"86.9"	""	"76.1"	""	"113.6"	"115.4"	""	"549"	"22"	"34.000"	"27.000"	"0.171215212339924"	"25"	"0.002559"	"0.02595"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTLEIR"	"[R].sMTLEIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"539.80963"	"1078.61199"	"1078.61280"	"-0.75"	"-0.00041"	"4/56"	"4"	"56"	"1436055.76037598"	"HCD"	"MS2"	"32.6228"	"83.3"	"100.000"	"60.9044"	"19750"	"19750"	"19725"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.0"	""	"126.3"	""	"123.5"	""	"112.4"	""	"157.7"	"163.7"	""	"549"	"21"	"34.000"	"27.000"	"0.201160334346629"	"24"	"0.004234"	"0.04787"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDIEIGR"	"[K].fDIEIGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"Q9JIH7; Q7TPK6"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2; Serine/threonine-protein kinase WNK4 OS=Rattus norvegicus OX=10116 GN=Wnk4 PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"539.80975"	"1078.61223"	"1078.60943"	"2.60"	"0.00140"	"6/52"	"6"	"52"	"634335.679260254"	"HCD"	"MS2"	"32.79617"	"34.5"	"100.000"	"92.1639"	"32395"	"32395"	"32379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.1"	""	"43.6"	""	"47.0"	""	"67.0"	""	"58.2"	"66.9"	""	"548"	"23"	"34.000"	"27.000"	"0.14647063447477"	"24"	"0.002035"	"0.01839"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPPAGLLQ"	"[R].gPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"539.82593"	"1078.64458"	"1078.64581"	"-1.14"	"-0.00062"	"6/66"	"6"	"66"	"447515.816162109"	"HCD"	"MS2"	"43.16348"	"14.0"	"100.000"	"84.8423"	"29450"	"29450"	"29431"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"18.8"	""	"19.4"	""	"26.6"	""	"28.4"	"24.1"	""	"363"	"30"	"32.000"	"25.000"	"0.0191812377922279"	""	"0.00452"	"0.05267"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVYIDR"	"[R].lAVYIDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"539.82654"	"1078.64580"	"1078.64581"	"-0.01"	"-0.00001"	"6/48"	"6"	"48"	"1112870.44311523"	"HCD"	"MS2"	"32.96289"	"56.2"	"100.000"	"74.4763"	"25255"	"25255"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"56.3"	""	"43.3"	""	"102.9"	""	"125.7"	"148.8"	""	"303"	"34"	"31.000"	"24.000"	"0.00557715395068435"	""	"0.0001686"	"0.00196"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVYIDR"	"[R].lAVYIDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"539.82666"	"1078.64604"	"1078.64581"	"0.22"	"0.00012"	"6/48"	"6"	"48"	"1406967.77539063"	"HCD"	"MS2"	"23.18678"	"71.0"	"100.000"	"74.6134"	"25341"	"25341"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.8"	""	"79.8"	""	"56.5"	""	"125.5"	""	"165.5"	"192.2"	""	"303"	"35"	"31.000"	"24.000"	"0.00505141015336301"	""	"0.0001991"	"0.004582"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIVHR"	"[R].dIPIVHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTR7"	"Signal peptidase complex catalytic subunit SEC11C OS=Rattus norvegicus OX=10116 GN=Sec11c PE=2 SV=3"	"Q9WTR7"	"Signal peptidase complex catalytic subunit SEC11C OS=Rattus norvegicus OX=10116 GN=Sec11c PE=2 SV=3"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"360.22336"	"1078.65552"	"1078.65704"	"-1.41"	"-0.00051"	"5/48"	"5"	"48"	"807041.421386719"	"HCD"	"MS2"	"28.18392"	"33.9"	"100.000"	"39.9538"	"11243"	"11243"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"40.0"	""	"50.7"	""	"59.4"	""	"65.7"	"64.0"	""	"281"	"19"	"31.000"	"24.000"	"0.16775532867723"	"22"	"0.009239"	"0.1189"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPIVHR"	"[R].dIPIVHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTR7"	"Signal peptidase complex catalytic subunit SEC11C OS=Rattus norvegicus OX=10116 GN=Sec11c PE=2 SV=3"	"Q9WTR7"	"Signal peptidase complex catalytic subunit SEC11C OS=Rattus norvegicus OX=10116 GN=Sec11c PE=2 SV=3"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"360.22360"	"1078.65625"	"1078.65704"	"-0.73"	"-0.00026"	"9/48"	"9"	"48"	"1010983.71508789"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"39.9614"	"11280"	"11280"	"11254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"46.6"	""	"51.8"	""	"59.2"	"2.7"	"75.7"	"61.1"	""	"259"	"28"	"31.000"	"24.000"	"0.0213437029702553"	"24"	"0.002628"	"0.02731"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVIYTR"	"[R].aQVIYTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"540.32385"	"1079.64043"	"1079.64106"	"-0.59"	"-0.00032"	"6/58"	"6"	"58"	"6651082.44000244"	"HCD"	"MS2"	"17.19036"	"317.4"	"100.000"	"38.2455"	"10551"	"10551"	"10534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"537.7"	""	"601.6"	""	"612.7"	""	"426.7"	""	"453.8"	"360.4"	""	"336"	"35"	"32.000"	"25.000"	"0.00575849881398036"	"25"	"0.002189"	"0.02009"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVIYTR"	"[R].aQVIYTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"540.32416"	"1079.64104"	"1079.64106"	"-0.02"	"-0.00001"	"6/58"	"6"	"58"	"6220759.50769043"	"HCD"	"MS2"	"21.11054"	"304.9"	"100.000"	"38.1257"	"10537"	"10537"	"10519"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"529.4"	""	"544.8"	""	"602.8"	""	"403.6"	""	"414.7"	"380.8"	""	"321"	"25"	"32.000"	"25.000"	"0.0502892358752652"	"25"	"0.002525"	"0.02482"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSPAECV"	"[K].sLSPAEcV.[-]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.76672"	"1080.52617"	"1080.52668"	"-0.47"	"-0.00026"	"5/68"	"5"	"68"	"313133.639862061"	"HCD"	"MS2"	"25.87642"	"11.8"	"100.000"	"104.8005"	"37497"	"37497"	"37481"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"13.0"	""	"16.9"	""	"24.7"	""	"23.0"	"24.8"	""	"364"	"21"	"32.000"	"25.000"	"0.13901811261114"	"14"	"0.001348"	"0.01092"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSPAECV"	"[K].sLSPAEcV.[-]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"540.76697"	"1080.52666"	"1080.52668"	"-0.02"	"-0.00001"	"5/68"	"5"	"68"	"292490.274780273"	"HCD"	"MS2"	"19.42257"	"10.0"	"100.000"	"105.0289"	"37607"	"37607"	"37591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"8.7"	""	"11.5"	""	"21.0"	""	"20.8"	"15.8"	""	"364"	"23"	"32.000"	"25.000"	"0.102346121184643"	"18"	"0.004713"	"0.05564"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFIDTVR"	"[K].tFIDTVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"540.81586"	"1080.62444"	"1080.62508"	"-0.59"	"-0.00032"	"6/56"	"6"	"56"	"947842.23034668"	"HCD"	"MS2"	"10.64504"	"54.9"	"100.000"	"58.6183"	"18819"	"18819"	"18797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.9"	""	"61.7"	""	"64.7"	""	"102.4"	"2.5"	"105.7"	"116.1"	""	"397"	"32"	"32.000"	"25.000"	"0.0127280100952155"	"18"	"0.0005778"	"0.007158"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSLFLR"	"[R].dTSLFLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"540.81592"	"1080.62456"	"1080.62508"	"-0.48"	"-0.00026"	"5/52"	"5"	"52"	"782267.613342285"	"HCD"	"MS2"	"16.04473"	"39.2"	"100.000"	"75.4756"	"25691"	"25691"	"25665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"51.7"	""	"60.3"	""	"67.8"	"0.4"	"66.3"	"67.6"	""	"397"	"11"	"32.000"	"25.000"	"1.58767099618895"	"23"	"0.009312"	"0.1206"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFIDTVR"	"[K].tFIDTVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"540.81622"	"1080.62517"	"1080.62508"	"0.09"	"0.00005"	"6/56"	"6"	"56"	"835661.585632324"	"HCD"	"MS2"	"9.193777"	"49.1"	"100.000"	"58.3050"	"18727"	"18727"	"18699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"55.4"	""	"57.9"	""	"96.3"	""	"97.7"	"102.4"	""	"377"	"28"	"32.000"	"25.000"	"0.0285963994266085"	"19"	"0.001615"	"0.01415"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGHQLGR"	"[K].aLGHQLGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"540.81750"	"1080.62773"	"1080.64754"	"-18.33"	"-0.00990"	"6/64"	"6"	"64"	"2225249.88513184"	"HCD"	"MS2"	"53.24978"	"162.8"	"100.000"	"25.5755"	"5461"	"5461"	"5438"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.9"	""	"194.8"	""	"216.1"	""	"268.3"	""	"316.2"	"330.1"	""	"373"	"4"	"32.000"	"25.000"	"8.02932128567041"	"15"	"0.006267"	"0.07778"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAILHR"	"[R].eIAILHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"360.89478"	"1080.66977"	"1080.67269"	"-2.70"	"-0.00097"	"4/48"	"4"	"48"	"1343848.97436523"	"HCD"	"MS2"	"37.63597"	"34.3"	"100.000"	"44.6504"	"13184"	"13184"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.5"	""	"38.5"	""	"76.4"	""	"51.5"	""	"58.8"	"55.2"	""	"135"	"23"	"28.000"	"21.000"	"0.0326064691376847"	""	"0.001348"	"0.01144"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAILHR"	"[R].eIAILHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"360.89526"	"1080.67124"	"1080.67269"	"-1.35"	"-0.00049"	"4/48"	"4"	"48"	"1395214.48217773"	"HCD"	"MS2"	"34.85318"	"39.3"	"100.000"	"44.7486"	"13190"	"13190"	"13169"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.1"	""	"42.9"	""	"78.6"	""	"55.9"	"1.8"	"69.1"	"69.1"	""	"136"	"23"	"28.000"	"21.000"	"0.0326218745072948"	""	"0.0001991"	"0.005027"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALDQYR"	"[R].sALDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"541.29486"	"1081.58245"	"1081.58394"	"-1.38"	"-0.00075"	"5/58"	"5"	"58"	"3506701.23583984"	"HCD"	"MS2"	"11.11922"	"207.1"	"100.000"	"37.3751"	"10197"	"10197"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"385.5"	""	"298.8"	""	"309.9"	""	"268.7"	"1.1"	"326.8"	"366.7"	""	"450"	"15"	"33.000"	"26.000"	"0.651902307232797"	"20"	"0.006845"	"0.08621"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALDQYR"	"[R].sALDQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"541.29559"	"1081.58391"	"1081.58394"	"-0.03"	"-0.00001"	"5/58"	"5"	"58"	"3358445.67224121"	"HCD"	"MS2"	"11.57649"	"189.0"	"100.000"	"37.2699"	"10191"	"10191"	"10169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"315.6"	""	"277.3"	""	"278.5"	""	"264.9"	"0.9"	"317.4"	"333.0"	""	"447"	"15"	"33.000"	"26.000"	"0.678074679667419"	"18"	"0.004314"	"0.0506"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSNTTVF"	"[K].aLSNTTVF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.30786"	"1081.60845"	"1081.60909"	"-0.60"	"-0.00032"	"7/62"	"7"	"62"	"1494483.53045654"	"HCD"	"MS2"	"15.16723"	"24.4"	"100.000"	"96.1103"	"33991"	"33991"	"33977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.3"	""	"37.6"	""	"29.3"	""	"45.9"	"1.4"	"36.1"	"42.9"	""	"419"	"54"	"33.000"	"26.000"	"8.43692186911836E-05"	"16"	"0.0001991"	"0.003569"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSNTTVF"	"[K].aLSNTTVF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.30811"	"1081.60893"	"1081.60909"	"-0.15"	"-0.00008"	"6/62"	"6"	"62"	"1425048.60223389"	"HCD"	"MS2"	"14.27983"	"22.8"	"100.000"	"96.1978"	"34058"	"34058"	"34047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.4"	""	"27.0"	""	"34.3"	""	"42.8"	""	"36.3"	"38.8"	""	"402"	"46"	"33.000"	"26.000"	"0.000496816553148242"	"15"	"0.001453"	"0.01176"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITEYAR"	"[R].tITEYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"541.80493"	"1082.60259"	"1082.60434"	"-1.62"	"-0.00088"	"6/54"	"6"	"54"	"7330785.39031982"	"HCD"	"MS2"	"0"	"371.9"	"100.000"	"38.9806"	"10851"	"10851"	"10829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"580.0"	""	"517.9"	""	"552.9"	""	"547.8"	"9.2"	"626.2"	"685.6"	""	"364"	"32"	"32.000"	"25.000"	"0.012678602556816"	"16"	"0.002462"	"0.02309"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITEYAR"	"[R].tITEYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"541.80554"	"1082.60381"	"1082.60434"	"-0.49"	"-0.00027"	"6/54"	"6"	"54"	"7682055.45739746"	"HCD"	"MS2"	"6.362806"	"379.4"	"100.000"	"38.9002"	"10854"	"10854"	"10830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"595.9"	""	"537.9"	""	"560.3"	""	"567.9"	"5.2"	"633.1"	"689.5"	""	"365"	"33"	"32.000"	"25.000"	"0.00968864110721553"	"16"	"0.001615"	"0.01354"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEHLGR"	"[R].lEEHLGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"361.54291"	"1082.61417"	"1082.61557"	"-1.30"	"-0.00047"	"5/50"	"5"	"50"	"6185779.10467529"	"HCD"	"MS2"	"34.6744"	"304.2"	"100.000"	"30.9590"	"7642"	"7642"	"7622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"434.3"	""	"371.1"	""	"346.3"	""	"525.2"	""	"606.8"	"604.1"	""	"358"	"14"	"32.000"	"25.000"	"0.669657953006976"	"18"	"0.003529"	"0.03905"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEHLGR"	"[R].lEEHLGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"361.54300"	"1082.61444"	"1082.61557"	"-1.04"	"-0.00038"	"6/50"	"6"	"50"	"6687607.75115967"	"HCD"	"MS2"	"33.51239"	"329.0"	"100.000"	"31.0975"	"7660"	"7660"	"7636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"464.6"	""	"376.1"	""	"362.3"	""	"587.8"	"3.1"	"657.3"	"670.8"	""	"358"	"16"	"32.000"	"25.000"	"0.427418219641459"	"19"	"0.002328"	"0.02216"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDTLHR"	"[K].vIDTLHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"361.55518"	"1082.65097"	"1082.65196"	"-0.91"	"-0.00033"	"7/50"	"7"	"50"	"1195810.48077393"	"HCD"	"MS2"	"44.07187"	"66.0"	"100.000"	"36.7804"	"9992"	"9992"	"9965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.0"	""	"80.6"	""	"88.4"	""	"121.7"	""	"123.8"	"121.4"	""	"237"	"19"	"30.000"	"23.000"	"0.147814946437789"	"18"	"0.001488"	"0.01216"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDTLHR"	"[K].vIDTLHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"361.55533"	"1082.65143"	"1082.65196"	"-0.49"	"-0.00018"	"5/50"	"5"	"50"	"2625994.82598877"	"HCD"	"MS2"	"38.53822"	"114.8"	"100.000"	"36.7799"	"9954"	"9954"	"9933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.8"	""	"152.2"	""	"167.4"	""	"181.5"	""	"208.4"	"218.1"	""	"227"	"22"	"30.000"	"23.000"	"0.0669878225995044"	"20"	"0.003043"	"0.03262"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26489"	"1083.52251"	"1083.52298"	"-0.43"	"-0.00023"	"5/56"	"5"	"56"	"704325.456970215"	"HCD"	"MS2"	"22.10895"	"17.7"	"100.000"	"110.5129"	"39728"	"39728"	"39708"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"21.7"	""	"21.8"	""	"30.8"	""	"40.2"	"37.1"	""	"314"	"34"	"31.000"	"24.000"	"0.00572663696673204"	"15"	"0.001488"	"0.01211"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"542.26508"	"1083.52287"	"1083.52298"	"-0.10"	"-0.00005"	"5/56"	"5"	"56"	"736660.529418945"	"HCD"	"MS2"	"18.13715"	"19.9"	"100.000"	"110.3808"	"39661"	"39661"	"39639"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"21.9"	""	"26.3"	""	"29.8"	""	"47.2"	"42.4"	""	"278"	"34"	"31.000"	"24.000"	"0.00512878862012509"	"15"	"0.001103"	"0.009169"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGMSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"542.27600"	"1083.54473"	"1083.54545"	"-0.66"	"-0.00036"	"7/64"	"7"	"64"	"4624445.46350098"	"HCD"	"MS2"	"12.58376"	"272.6"	"100.000"	"29.5795"	"7053"	"7053"	"7031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"416.2"	""	"329.3"	""	"268.5"	""	"301.5"	""	"674.9"	"609.6"	""	"279"	"26"	"31.000"	"24.000"	"0.0353650443954458"	"19"	"0.0001991"	"0.002639"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGMSR"	"[K].gPSYGMSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"542.27600"	"1083.54473"	"1083.54545"	"-0.66"	"-0.00036"	"7/64"	"7"	"64"	"5062919.11053467"	"HCD"	"MS2"	"0"	"300.8"	"100.000"	"29.4340"	"7034"	"7034"	"7016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"452.7"	""	"343.4"	""	"319.0"	""	"330.1"	""	"743.7"	"677.9"	""	"279"	"28"	"31.000"	"24.000"	"0.0226764051427192"	"20"	"0.0001991"	"0.005362"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"542.32690"	"1083.64653"	"1083.64721"	"-0.62"	"-0.00034"	"7/76"	"7"	"76"	"1182156.22467041"	"HCD"	"MS2"	"28.96185"	"75.1"	"100.000"	"38.4476"	"10669"	"10669"	"10644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.5"	""	"99.7"	""	"101.0"	""	"122.6"	""	"140.4"	"162.2"	""	"211"	"21"	"30.000"	"23.000"	"0.0843825139032415"	"20"	"9.9E-05"	"0.0005716"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"361.88705"	"1083.64661"	"1083.64721"	"-0.55"	"-0.00020"	"11/76"	"11"	"76"	"2358545.91040039"	"HCD"	"MS2"	"27.53175"	"88.9"	"100.000"	"37.7670"	"10391"	"10391"	"10362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.6"	""	"110.2"	""	"133.4"	""	"143.0"	""	"169.7"	"181.4"	""	"211"	"32"	"30.000"	"23.000"	"0.00706728262934436"	"21"	"0"	"0.0003479"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"542.32703"	"1083.64678"	"1083.64721"	"-0.40"	"-0.00022"	"8/76"	"8"	"76"	"6741483.80053711"	"HCD"	"MS2"	"23.00241"	"294.8"	"100.000"	"37.5467"	"10302"	"10302"	"10284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"377.5"	""	"378.3"	""	"504.7"	""	"441.8"	""	"495.9"	"602.6"	""	"211"	"39"	"30.000"	"23.000"	"0.00126547176482259"	""	"0"	"0.0001325"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"542.32703"	"1083.64678"	"1083.64721"	"-0.40"	"-0.00022"	"8/76"	"8"	"76"	"6197937.52740479"	"HCD"	"MS2"	"18.07577"	"279.3"	"100.000"	"37.6367"	"10303"	"10303"	"10288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"348.7"	"3.1"	"369.8"	""	"465.8"	""	"413.2"	""	"488.0"	"564.6"	""	"211"	"48"	"30.000"	"23.000"	"0.000166821668143026"	""	"0"	"0.0002334"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"542.32715"	"1083.64702"	"1083.64721"	"-0.17"	"-0.00009"	"8/76"	"8"	"76"	"2737504.98339844"	"HCD"	"MS2"	"0"	"138.0"	"100.000"	"38.2548"	"10554"	"10554"	"10534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.9"	""	"183.6"	""	"223.1"	""	"193.6"	""	"250.8"	"280.3"	""	"211"	"44"	"30.000"	"23.000"	"0.000408556815392306"	"23"	"0"	"0.0001672"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"361.88724"	"1083.64716"	"1083.64721"	"-0.04"	"-0.00002"	"10/76"	"10"	"76"	"2393261.32098389"	"HCD"	"MS2"	"66.83736"	"89.3"	"100.000"	"37.8523"	"10390"	"10390"	"10364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.7"	""	"119.6"	""	"145.6"	""	"138.9"	"0.0"	"161.2"	"173.2"	""	"211"	"36"	"30.000"	"23.000"	"0.00273056462548651"	"22"	"9.9E-05"	"0.0005324"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"542.32733"	"1083.64739"	"1083.64721"	"0.16"	"0.00009"	"7/76"	"7"	"76"	"1120142.26702881"	"HCD"	"MS2"	"14.42052"	"68.1"	"100.000"	"38.5672"	"10682"	"10682"	"10658"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.9"	""	"87.8"	""	"92.3"	""	"117.7"	""	"127.9"	"140.7"	""	"209"	"17"	"30.000"	"23.000"	"0.209950198917612"	"16"	"0.0001686"	"0.001579"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"542.32751"	"1083.64775"	"1083.64721"	"0.50"	"0.00027"	"8/76"	"8"	"76"	"70368788.8759766"	"HCD"	"MS2"	"0"	"376.5"	"14.457"	"37.9421"	"10427"	"10427"	"10410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"465.6"	""	"496.7"	""	"626.4"	""	"538.9"	""	"661.3"	"784.7"	""	"208"	"48"	"30.000"	"23.000"	"0.000157773238215771"	""	"0"	"0.0003034"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGNIAVPR"	"[R].aGGNIAVPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"542.32758"	"1083.64787"	"1083.64721"	"0.62"	"0.00033"	"8/76"	"8"	"76"	"56785446.7202148"	"HCD"	"MS2"	"0"	"371.1"	"17.354"	"37.8546"	"10427"	"10427"	"10410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"442.2"	""	"484.3"	""	"648.5"	""	"532.2"	""	"655.2"	"759.9"	""	"208"	"47"	"30.000"	"23.000"	"0.000212340746245631"	""	"9.9E-05"	"0.000915"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAPIGIR"	"[R].dLAPIGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"542.33905"	"1083.67082"	"1083.67236"	"-1.42"	"-0.00077"	"7/56"	"7"	"56"	"7987230.74084473"	"HCD"	"MS2"	"2.948511"	"290.9"	"100.000"	"73.3080"	"24780"	"24780"	"24762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"429.9"	""	"402.1"	""	"426.6"	""	"466.0"	""	"501.2"	"530.0"	""	"170"	"47"	"29.000"	"22.000"	"0.000186388419504788"	""	"0.0001991"	"0.003569"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAPIGIR"	"[R].dLAPIGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"542.33929"	"1083.67131"	"1083.67236"	"-0.97"	"-0.00052"	"7/56"	"7"	"56"	"1281402.21697998"	"HCD"	"MS2"	"11.86546"	"60.8"	"100.000"	"73.6215"	"24908"	"24908"	"24889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.6"	""	"74.3"	""	"80.5"	""	"106.9"	""	"112.8"	"110.7"	""	"166"	"45"	"29.000"	"22.000"	"0.000235005535651349"	""	"0.0001686"	"0.001173"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAPIGIR"	"[R].dLAPIGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"542.33948"	"1083.67168"	"1083.67236"	"-0.63"	"-0.00034"	"7/56"	"7"	"56"	"3608701.67889404"	"HCD"	"MS2"	"17.5164"	"145.4"	"100.000"	"72.9945"	"24652"	"24652"	"24634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"215.1"	""	"205.8"	""	"190.2"	""	"239.7"	""	"262.4"	"264.0"	""	"166"	"52"	"29.000"	"22.000"	"4.88740233945139E-05"	""	"0.0001991"	"0.004792"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAPIGIR"	"[R].dLAPIGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"542.33960"	"1083.67192"	"1083.67236"	"-0.40"	"-0.00022"	"7/56"	"7"	"56"	"7946536.5848999"	"HCD"	"MS2"	"1.999491"	"290.8"	"100.000"	"73.4105"	"24851"	"24851"	"24835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"424.4"	""	"414.2"	""	"417.7"	""	"456.4"	"1.6"	"509.8"	"529.2"	""	"166"	"55"	"29.000"	"22.000"	"2.35547279360649E-05"	""	"0.0005161"	"0.006772"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAPIGIR"	"[R].dLAPIGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"542.33972"	"1083.67217"	"1083.67236"	"-0.18"	"-0.00010"	"7/56"	"7"	"56"	"4737868.17431641"	"HCD"	"MS2"	"18.04798"	"187.7"	"100.000"	"73.1133"	"24730"	"24730"	"24712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.4"	""	"244.6"	""	"268.5"	""	"308.0"	""	"339.8"	"333.0"	""	"166"	"55"	"29.000"	"22.000"	"2.44386995605297E-05"	""	"9.9E-05"	"0.0007859"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAPIGIR"	"[R].dLAPIGIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"542.34003"	"1083.67278"	"1083.67236"	"0.38"	"0.00021"	"7/56"	"7"	"56"	"1302964.57702637"	"HCD"	"MS2"	"19.31032"	"56.5"	"100.000"	"73.7240"	"24979"	"24979"	"24960"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.2"	""	"83.4"	""	"78.9"	""	"85.1"	""	"101.4"	"109.1"	""	"166"	"36"	"29.000"	"22.000"	"0.00232850991949992"	""	"0.0001991"	"0.002299"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALPDLTR"	"[K].aALPDLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"543.32886"	"1085.65044"	"1085.65162"	"-1.09"	"-0.00059"	"5/60"	"5"	"60"	"1251101.41082764"	"HCD"	"MS2"	"0"	"64.7"	"100.000"	"63.9480"	"21016"	"21016"	"20995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.5"	""	"81.7"	""	"82.7"	""	"116.5"	""	"129.5"	"125.6"	""	"355"	"33"	"32.000"	"25.000"	"0.00955428863966412"	""	"0.002286"	"0.02182"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALPDLTR"	"[K].aALPDLTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"Q9R0T3"	"DnaJ homolog subfamily C member 3 OS=Rattus norvegicus OX=10116 GN=Dnajc3 PE=1 SV=3"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"543.32892"	"1085.65056"	"1085.65162"	"-0.98"	"-0.00053"	"5/60"	"5"	"60"	"1111133.3895874"	"HCD"	"MS2"	"20.83828"	"59.6"	"100.000"	"63.9379"	"20980"	"20980"	"20958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.8"	""	"70.0"	""	"92.4"	""	"98.9"	""	"101.6"	"115.6"	""	"355"	"32"	"32.000"	"25.000"	"0.0104279360074035"	""	"0.003529"	"0.03908"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAPIER"	"[K].tAVAPIER.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"543.32892"	"1085.65056"	"1085.65162"	"-0.98"	"-0.00053"	"6/68"	"6"	"68"	"7230140.01068115"	"HCD"	"MS2"	"0"	"311.4"	"100.000"	"35.9175"	"9607"	"9607"	"9589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.0"	""	"406.4"	""	"410.9"	""	"529.2"	"21.2"	"580.4"	"691.3"	""	"355"	"46"	"32.000"	"25.000"	"0.000499112397395812"	""	"9.9E-05"	"0.0005533"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGR"	"[K].lPnSVLGR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"543.32928"	"1085.65129"	"1085.65163"	"-0.31"	"-0.00017"	"5/66"	"5"	"66"	"1652988.88018799"	"HCD"	"MS2"	"27.21698"	"60.2"	"100.000"	"68.9232"	"23034"	"23034"	"23016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.2"	""	"87.3"	""	"79.2"	""	"95.2"	""	"104.4"	"115.0"	""	"355"	"27"	"32.000"	"25.000"	"0.0323741487161736"	"25"	"0.0001686"	"0.001479"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGR"	"[K].lPnSVLGR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"543.32928"	"1085.65129"	"1085.65163"	"-0.31"	"-0.00017"	"7/66"	"7"	"66"	"2383763.0581665"	"HCD"	"MS2"	"23.61303"	"81.4"	"100.000"	"68.7581"	"22933"	"22933"	"22920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.3"	""	"109.1"	""	"122.3"	""	"134.5"	""	"151.4"	"136.7"	""	"355"	"29"	"32.000"	"25.000"	"0.0231845332643402"	"22"	"9.9E-05"	"0.0007101"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAPIER"	"[K].tAVAPIER.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"543.32941"	"1085.65154"	"1085.65162"	"-0.08"	"-0.00004"	"6/68"	"6"	"68"	"6433113.54821777"	"HCD"	"MS2"	"6.647112"	"280.5"	"100.000"	"35.7823"	"9589"	"9589"	"9570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.2"	""	"374.9"	""	"359.6"	""	"464.3"	"14.8"	"524.4"	"633.3"	""	"355"	"43"	"32.000"	"25.000"	"0.000798359242435586"	"25"	"9.9E-05"	"0.0005027"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPNSVLGR"	"[K].lPnSVLGR.[I]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"543.32971"	"1085.65215"	"1085.65163"	"0.48"	"0.00026"	"5/66"	"5"	"66"	"548206.755615234"	"HCD"	"MS2"	"29.0296"	"29.3"	"100.000"	"74.2229"	"25153"	"25153"	"25126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.2"	""	"33.8"	""	"38.9"	""	"47.6"	""	"57.0"	"59.1"	""	"355"	"21"	"32.000"	"25.000"	"0.134028870410615"	"21"	"0.00394"	"0.04313"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLANVIR"	"[R].gNLANVIR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"543.33423"	"1085.66118"	"1085.66286"	"-1.55"	"-0.00084"	"7/70"	"7"	"70"	"1960029.66223145"	"HCD"	"MS2"	"22.07739"	"92.1"	"100.000"	"52.1756"	"16201"	"16201"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.0"	""	"116.0"	""	"143.4"	""	"146.9"	"1.4"	"182.9"	"175.6"	""	"332"	"23"	"32.000"	"25.000"	"0.0751809982640011"	"23"	"0.0001991"	"0.003228"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLANVIR"	"[R].gNLANVIR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"543.33490"	"1085.66252"	"1085.66286"	"-0.31"	"-0.00017"	"7/70"	"7"	"70"	"1965934.24926758"	"HCD"	"MS2"	"23.19453"	"94.8"	"100.000"	"51.8763"	"16113"	"16113"	"16091"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.0"	""	"132.0"	""	"130.5"	""	"158.3"	"0.9"	"176.7"	"188.4"	""	"328"	"24"	"32.000"	"25.000"	"0.0682093401210197"	"24"	"0.0001991"	"0.00208"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLQELR"	"[K].vVLQELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"543.34717"	"1085.68706"	"1085.68801"	"-0.88"	"-0.00048"	"5/54"	"5"	"54"	"3264393.67211914"	"HCD"	"MS2"	"14.64268"	"131.9"	"100.000"	"70.6794"	"23714"	"23714"	"23696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.4"	""	"186.7"	""	"194.4"	""	"201.2"	""	"217.1"	"240.1"	""	"269"	"39"	"31.000"	"24.000"	"0.00185234673566236"	""	"0.001103"	"0.00905"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLQELR"	"[K].vVLQELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"543.34741"	"1085.68755"	"1085.68801"	"-0.43"	"-0.00023"	"5/54"	"5"	"54"	"864844.317260742"	"HCD"	"MS2"	"19.44863"	"41.6"	"100.000"	"70.9926"	"23841"	"23841"	"23826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"62.1"	""	"61.5"	""	"61.3"	"0.4"	"70.8"	"77.2"	""	"269"	"27"	"31.000"	"24.000"	"0.0299724527576856"	"18"	"0.002834"	"0.03053"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VVLLAEGR"	"[R].vVLLAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.0417"	"0.0000"	"1"	"1"	"1"	"543.34753"	"1085.68779"	"1085.68801"	"-0.20"	"-0.00011"	"6/56"	"6"	"56"	"1477154.43841553"	"HCD"	"MS2"	"27.2507"	"65.5"	"100.000"	"70.3661"	"23587"	"23587"	"23566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.8"	""	"94.9"	""	"91.9"	""	"109.5"	"0.2"	"109.7"	"112.1"	""	"269"	"24"	"31.000"	"24.000"	"0.0525681004840781"	"21"	"0.004819"	"0.05845"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLLAEGR"	"[R].vVLLAEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"543.34760"	"1085.68791"	"1085.68801"	"-0.09"	"-0.00005"	"6/56"	"6"	"56"	"1158058.70446777"	"HCD"	"MS2"	"26.34096"	"54.5"	"100.000"	"70.4049"	"23636"	"23636"	"23616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.8"	""	"78.0"	""	"80.4"	""	"77.8"	""	"98.6"	"109.9"	""	"269"	"24"	"31.000"	"24.000"	"0.0536688493677081"	""	"0.0009352"	"0.008266"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLQELR"	"[K].vVLQELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"543.34760"	"1085.68791"	"1085.68801"	"-0.09"	"-0.00005"	"5/54"	"5"	"54"	"3267325.94665527"	"HCD"	"MS2"	"12.86555"	"132.2"	"100.000"	"70.7087"	"23759"	"23759"	"23741"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.8"	""	"195.9"	""	"203.8"	""	"202.0"	""	"220.9"	"230.8"	""	"269"	"39"	"31.000"	"24.000"	"0.0018311430979167"	""	"0.001261"	"0.01019"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAEVLVR"	"[K].aVAEVLVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"543.34766"	"1085.68804"	"1085.68801"	"0.02"	"0.00001"	"6/56"	"6"	"56"	"1234248.5524292"	"HCD"	"MS2"	"20.23965"	"56.2"	"100.000"	"61.8543"	"20165"	"20165"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.6"	""	"70.7"	""	"84.1"	""	"88.4"	""	"110.4"	"112.7"	""	"269"	"39"	"31.000"	"24.000"	"0.00174872808245478"	"23"	"0"	"0.0002434"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVLQELR"	"[K].vVLQELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"543.34796"	"1085.68865"	"1085.68801"	"0.59"	"0.00032"	"5/54"	"5"	"54"	"1301382.57250977"	"HCD"	"MS2"	"25.77328"	"57.7"	"100.000"	"71.0152"	"23882"	"23882"	"23863"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	""	"70.8"	""	"96.6"	""	"85.5"	""	"95.8"	"108.8"	""	"257"	"30"	"31.000"	"24.000"	"0.0132404616476748"	""	"0.0003938"	"0.00626"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHLDYPR"	"[R].gHLDYPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"362.86743"	"1086.58774"	"1086.58936"	"-1.49"	"-0.00054"	"5/48"	"5"	"48"	"1275930.82263184"	"HCD"	"MS2"	"48.89984"	"64.4"	"100.000"	"27.5079"	"6257"	"6257"	"6230"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.5"	""	"82.9"	""	"81.6"	""	"90.7"	"1.4"	"171.9"	"105.6"	""	"417"	"15"	"33.000"	"26.000"	"0.645811923886656"	"13"	"0.006613"	"0.08235"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHLDYPR"	"[R].gHLDYPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"362.86798"	"1086.58939"	"1086.58936"	"0.03"	"0.00001"	"9/48"	"9"	"48"	"1298863.05523682"	"HCD"	"MS2"	"12.11425"	"64.6"	"100.000"	"27.7406"	"6311"	"6311"	"6295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.3"	""	"75.2"	""	"89.7"	""	"91.6"	"2.2"	"167.9"	"104.3"	""	"450"	"18"	"33.000"	"26.000"	"0.336653022621247"	"14"	"0.002525"	"0.02468"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPVELTG"	"[R].eLPVELTG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"543.81555"	"1086.62383"	"1086.62441"	"-0.53"	"-0.00029"	"5/70"	"5"	"70"	"234135.43182373"	"HCD"	"MS2"	"52.21622"	"9.6"	"100.000"	"105.8853"	"37932"	"37932"	"37910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"10.6"	""	"11.7"	""	"22.5"	""	"13.9"	"19.5"	""	"418"	"10"	"33.000"	"26.000"	"2.01904633708871"	"19"	"0.004114"	"0.04448"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPVELTG"	"[R].eLPVELTG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"543.81683"	"1086.62639"	"1086.62441"	"1.83"	"0.00099"	"5/70"	"5"	"70"	"238724.856262207"	"HCD"	"MS2"	"43.1314"	"10.3"	"100.000"	"106.1635"	"38061"	"38061"	"38042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"8.9"	""	"13.8"	""	"19.8"	""	"19.7"	"22.8"	""	"461"	"20"	"33.000"	"26.000"	"0.235869034720714"	"19"	"0.002559"	"0.02591"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEAAGR"	"[K].lIQEAAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"543.82666"	"1086.64604"	"1086.64687"	"-0.76"	"-0.00042"	"6/66"	"6"	"66"	"3779032.73010254"	"HCD"	"MS2"	"5.874121"	"175.0"	"100.000"	"42.1039"	"12112"	"12112"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.0"	""	"225.5"	""	"246.1"	""	"281.1"	""	"337.1"	"333.7"	""	"400"	"29"	"33.000"	"26.000"	"0.0277990526242671"	""	"0.0001991"	"0.003307"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPVTNIAR"	"[R].sPVTNIAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"543.82666"	"1086.64604"	"1086.64687"	"-0.76"	"-0.00042"	"7/68"	"7"	"68"	"19928070.9534912"	"HCD"	"MS2"	"0"	"524.0"	"64.635"	"36.0028"	"9679"	"9679"	"9665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"700.1"	""	"671.4"	""	"653.9"	""	"901.1"	"2.2"	"971.1"	"1069.5"	""	"400"	"35"	"33.000"	"26.000"	"0.00673023138750982"	""	"0.0001991"	"0.005312"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPVTNIAR"	"[R].sPVTNIAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"543.82690"	"1086.64653"	"1086.64687"	"-0.31"	"-0.00017"	"7/68"	"7"	"68"	"18305017.9348145"	"HCD"	"MS2"	"0"	"442.4"	"57.898"	"36.0897"	"9677"	"9677"	"9661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"584.9"	""	"568.6"	""	"572.3"	""	"738.7"	"3.3"	"863.6"	"864.8"	""	"397"	"31"	"32.000"	"25.000"	"0.0145131108071458"	""	"0.0001991"	"0.005856"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEAAGR"	"[K].lIQEAAGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"543.82721"	"1086.64714"	"1086.64687"	"0.25"	"0.00013"	"6/66"	"6"	"66"	"3987909.36871338"	"HCD"	"MS2"	"16.8471"	"167.6"	"100.000"	"42.0026"	"12105"	"12105"	"12081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.6"	""	"221.7"	""	"239.5"	""	"260.2"	""	"312.6"	"307.3"	""	"397"	"29"	"32.000"	"25.000"	"0.0270246769469491"	""	"0.0001991"	"0.003255"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVDLER"	"[KR].iLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"543.83905"	"1086.67082"	"1086.67203"	"-1.11"	"-0.00060"	"9/52"	"9"	"52"	"1672289.02185059"	"HCD"	"MS2"	"4.631536"	"79.4"	"100.000"	"92.7060"	"32651"	"32651"	"32632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.7"	""	"100.8"	""	"100.9"	""	"64.3"	""	"82.1"	"287.6"	""	"414"	"30"	"33.000"	"26.000"	"0.0190094847472101"	""	"0.001049"	"0.008917"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVDLER"	"[KR].lLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"D3ZEF4"	"Cullin-7 OS=Rattus norvegicus OX=10116 GN=Cul7 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"543.83905"	"1086.67082"	"1086.67203"	"-1.11"	"-0.00060"	"9/52"	"9"	"52"	"1672289.02185059"	"HCD"	"MS2"	"4.631536"	"79.4"	"100.000"	"92.7060"	"32651"	"32651"	"32632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.7"	""	"100.8"	""	"100.9"	""	"64.3"	""	"82.1"	"287.6"	""	"414"	"30"	"33.000"	"26.000"	"0.0190094847472101"	""	"0.001049"	"0.008917"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVDLER"	"[KR].iLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"543.83942"	"1086.67156"	"1086.67203"	"-0.43"	"-0.00023"	"9/52"	"9"	"52"	"2270973.71087646"	"HCD"	"MS2"	"3.565191"	"93.7"	"100.000"	"92.7074"	"32616"	"32616"	"32597"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.9"	""	"106.7"	""	"117.6"	""	"93.0"	""	"94.4"	"338.5"	""	"414"	"33"	"33.000"	"26.000"	"0.0116404654314402"	""	"0.001348"	"0.0109"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVDLER"	"[KR].lLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"D3ZEF4"	"Cullin-7 OS=Rattus norvegicus OX=10116 GN=Cul7 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"543.83942"	"1086.67156"	"1086.67203"	"-0.43"	"-0.00023"	"9/52"	"9"	"52"	"2270973.71087646"	"HCD"	"MS2"	"3.565191"	"93.7"	"100.000"	"92.7074"	"32616"	"32616"	"32597"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.9"	""	"106.7"	""	"117.6"	""	"93.0"	""	"94.4"	"338.5"	""	"414"	"33"	"33.000"	"26.000"	"0.0116404654314402"	""	"0.001348"	"0.0109"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVDLER"	"[KR].iLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"543.83966"	"1086.67204"	"1086.67203"	"0.02"	"0.00001"	"5/52"	"5"	"52"	"2377389.5345459"	"HCD"	"MS2"	"2.49837"	"102.6"	"100.000"	"92.4070"	"32530"	"32530"	"32513"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.9"	""	"107.1"	""	"126.8"	""	"86.6"	""	"128.6"	"366.8"	""	"414"	"29"	"33.000"	"26.000"	"0.0269135102652891"	""	"0.001348"	"0.01053"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVDLER"	"[KR].lLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"D3ZEF4"	"Cullin-7 OS=Rattus norvegicus OX=10116 GN=Cul7 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"543.83966"	"1086.67204"	"1086.67203"	"0.02"	"0.00001"	"5/52"	"5"	"52"	"2377389.5345459"	"HCD"	"MS2"	"2.49837"	"102.6"	"100.000"	"92.4070"	"32530"	"32530"	"32513"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.9"	""	"107.1"	""	"126.8"	""	"86.6"	""	"128.6"	"366.8"	""	"414"	"29"	"33.000"	"26.000"	"0.0269135102652891"	""	"0.001348"	"0.01053"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVDLER"	"[KR].iLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"543.83966"	"1086.67204"	"1086.67203"	"0.02"	"0.00001"	"5/52"	"5"	"52"	"1751299.20428467"	"HCD"	"MS2"	"2.85214"	"82.8"	"100.000"	"92.4079"	"32494"	"32494"	"32473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.2"	""	"94.4"	""	"96.3"	""	"94.0"	""	"103.4"	"275.1"	""	"414"	"25"	"33.000"	"26.000"	"0.0613720097631539"	""	"0.001348"	"0.01093"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVDLER"	"[KR].lLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"D3ZEF4"	"Cullin-7 OS=Rattus norvegicus OX=10116 GN=Cul7 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"543.83966"	"1086.67204"	"1086.67203"	"0.02"	"0.00001"	"5/52"	"5"	"52"	"1751299.20428467"	"HCD"	"MS2"	"2.85214"	"82.8"	"100.000"	"92.4079"	"32494"	"32494"	"32473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.2"	""	"94.4"	""	"96.3"	""	"94.0"	""	"103.4"	"275.1"	""	"414"	"25"	"33.000"	"26.000"	"0.0613720097631539"	""	"0.001348"	"0.01093"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVDLER"	"[KR].iLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"543.84039"	"1086.67351"	"1086.67203"	"1.37"	"0.00074"	"8/52"	"8"	"52"	"240471.665588379"	"HCD"	"MS2"	"42.54712"	"14.2"	"100.000"	"95.4384"	"33718"	"33718"	"33695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"19.9"	""	"18.1"	""	"24.5"	""	"27.2"	"29.5"	""	"440"	"6"	"33.000"	"26.000"	"5.35084881996239"	"16"	"0.008135"	"0.1037"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVDLER"	"[KR].lLVDLER.[AL]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"D3ZEF4"	"Cullin-7 OS=Rattus norvegicus OX=10116 GN=Cul7 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"543.84039"	"1086.67351"	"1086.67203"	"1.37"	"0.00074"	"8/52"	"8"	"52"	"240471.665588379"	"HCD"	"MS2"	"42.54712"	"14.2"	"100.000"	"95.4384"	"33718"	"33718"	"33695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"19.9"	""	"18.1"	""	"24.5"	""	"27.2"	"29.5"	""	"440"	"6"	"33.000"	"26.000"	"5.35084881996239"	"16"	"0.008135"	"0.1037"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIVENR"	"[R].iDIVENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"3"	"544.31726"	"1087.62724"	"1087.63089"	"-3.35"	"-0.00182"	"4/56"	"4"	"56"	"2433873.4553833"	"HCD"	"MS2"	"0"	"120.9"	"100.000"	"56.0928"	"17828"	"17828"	"17810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.5"	""	"159.7"	""	"143.7"	""	"197.7"	"0.4"	"221.8"	"232.1"	""	"659"	"27"	"35.000"	"28.000"	"0.0592727966534936"	"24"	"0.002875"	"0.03079"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIVENR"	"[R].iDIVENR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"3"	"544.31793"	"1087.62859"	"1087.63089"	"-2.12"	"-0.00115"	"4/56"	"4"	"56"	"2592409.7399292"	"HCD"	"MS2"	"0"	"124.4"	"100.000"	"56.4197"	"17926"	"17926"	"17905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.2"	""	"144.7"	""	"145.0"	""	"218.0"	""	"228.7"	"245.6"	""	"640"	"25"	"35.000"	"28.000"	"0.100496278204039"	"23"	"0.002628"	"0.02734"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"544.31860"	"1087.62993"	"1087.63089"	"-0.88"	"-0.00048"	"5/54"	"5"	"54"	"2973596.98864746"	"HCD"	"MS2"	"25.98873"	"148.5"	"100.000"	"53.1567"	"16636"	"16636"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.3"	""	"119.9"	""	"103.7"	""	"316.8"	""	"378.8"	"400.0"	""	"641"	"27"	"35.000"	"28.000"	"0.0686796437658979"	"25"	"0.003208"	"0.03451"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVDNR"	"[R].lLEVDNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"544.31873"	"1087.63017"	"1087.63089"	"-0.66"	"-0.00036"	"5/54"	"5"	"54"	"6429699.41619873"	"HCD"	"MS2"	"0.5870134"	"286.5"	"100.000"	"53.7621"	"16882"	"16882"	"16864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"312.5"	""	"339.2"	""	"335.4"	""	"488.9"	""	"594.6"	"654.5"	""	"641"	"24"	"35.000"	"28.000"	"0.139581555516225"	""	"0.004275"	"0.05022"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEVDNR"	"[R].lLEVDNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"P00406"	"Cytochrome c oxidase subunit 2 OS=Rattus norvegicus OX=10116 GN=Mtco2 PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"544.31897"	"1087.63066"	"1087.63089"	"-0.21"	"-0.00011"	"5/54"	"5"	"54"	"6381338.47406006"	"HCD"	"MS2"	"0"	"290.8"	"100.000"	"54.0425"	"16963"	"16963"	"16947"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"299.7"	""	"319.3"	""	"314.8"	""	"502.1"	""	"636.6"	"699.0"	""	"641"	"22"	"35.000"	"28.000"	"0.195806918982236"	""	"0.004213"	"0.0468"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"544.31909"	"1087.63091"	"1087.63089"	"0.02"	"0.00001"	"5/54"	"5"	"54"	"15960137.0164795"	"HCD"	"MS2"	"0"	"463.7"	"73.713"	"53.7435"	"16842"	"16842"	"16825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.3"	""	"251.8"	""	"237.0"	""	"958.7"	""	"1345.1"	"1417.1"	""	"641"	"29"	"35.000"	"28.000"	"0.041959280632131"	""	"0.003529"	"0.03883"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"544.31934"	"1087.63140"	"1087.63089"	"0.47"	"0.00025"	"5/54"	"5"	"54"	"14815336.2310791"	"HCD"	"MS2"	"0"	"557.2"	"97.120"	"53.4628"	"16761"	"16761"	"16744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"301.8"	""	"314.8"	""	"300.3"	""	"1160.2"	""	"1576.9"	"1689.5"	""	"641"	"29"	"35.000"	"28.000"	"0.041959280632131"	""	"0.003529"	"0.0392"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNR"	"[K].eIDLVNR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"544.31940"	"1087.63152"	"1087.63089"	"0.58"	"0.00031"	"5/54"	"5"	"54"	"2618452.51867676"	"HCD"	"MS2"	"24.52139"	"128.5"	"100.000"	"53.4466"	"16720"	"16720"	"16698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"98.2"	""	"96.7"	""	"264.7"	""	"329.9"	"336.9"	""	"626"	"29"	"34.000"	"27.000"	"0.0441107393906046"	"27"	"0.002508"	"0.02339"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQLLER"	"[R].vTQLLER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"544.33673"	"1087.66619"	"1087.66727"	"-1.00"	"-0.00054"	"6/64"	"6"	"64"	"471517.771240234"	"HCD"	"MS2"	"19.84169"	"26.9"	"100.000"	"67.9102"	"22590"	"22590"	"22564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"40.1"	""	"36.3"	""	"41.1"	""	"50.4"	"53.8"	""	"689"	"11"	"35.000"	"28.000"	"2.81312626933035"	"16"	"0.008926"	"0.1158"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVEENVR"	"[K].nVEENVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"544.79810"	"1088.58891"	"1088.58975"	"-0.77"	"-0.00042"	"5/62"	"5"	"62"	"845279.540893555"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"24.8466"	"5173"	"5173"	"5150"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.2"	""	"86.0"	""	"87.5"	""	"88.9"	"1.2"	"122.4"	"109.5"	""	"602"	"33"	"34.000"	"27.000"	"0.0160164586039305"	"21"	"0.001453"	"0.01185"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVEENVR"	"[K].nVEENVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"544.79846"	"1088.58965"	"1088.58975"	"-0.10"	"-0.00005"	"5/62"	"5"	"62"	"1448967.68609619"	"HCD"	"MS2"	"0"	"93.4"	"100.000"	"24.6718"	"5139"	"5139"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.8"	""	"139.1"	""	"100.0"	""	"167.9"	"5.4"	"158.9"	"150.7"	""	"587"	"38"	"34.000"	"27.000"	"0.00446280699976488"	"25"	"0.001615"	"0.01449"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLHTFER"	"[K].gLHTFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"363.53937"	"1088.60355"	"1088.60501"	"-1.34"	"-0.00049"	"4/52"	"4"	"52"	"3224848.90844727"	"HCD"	"MS2"	"61.92351"	"106.8"	"100.000"	"29.0322"	"6871"	"6871"	"6849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.0"	""	"112.7"	""	"134.6"	""	"170.5"	"2.8"	"242.7"	"217.6"	""	"629"	"14"	"34.000"	"27.000"	"1.19569565142817"	"20"	"0.007752"	"0.09915"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLHTFER"	"[K].gLHTFER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"P25304"	"Agrin OS=Rattus norvegicus OX=10116 GN=Agrn PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"363.53979"	"1088.60483"	"1088.60501"	"-0.16"	"-0.00006"	"4/52"	"4"	"52"	"2401971.71179199"	"HCD"	"MS2"	"54.29749"	"97.9"	"100.000"	"29.2648"	"6925"	"6925"	"6899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.9"	""	"110.3"	""	"120.9"	""	"152.5"	"3.5"	"238.7"	"189.5"	""	"778"	"12"	"35.000"	"28.000"	"2.33318728663393"	"17"	"0.007069"	"0.0891"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VANEITVN"	"[R].vANEITVN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"544.81116"	"1088.61504"	"1088.61490"	"0.12"	"0.00007"	"7/70"	"7"	"70"	"2167589.44262695"	"HCD"	"MS2"	"52.34211"	"77.6"	"100.000"	"62.0560"	"20247"	"20247"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.5"	""	"112.5"	""	"105.6"	""	"128.8"	"0.3"	"134.0"	"149.3"	""	"737"	"21"	"35.000"	"28.000"	"0.323919797452181"	"21"	"0.004234"	"0.04902"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLAESAR"	"[R].nVLAESAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"544.81604"	"1088.62480"	"1088.62614"	"-1.23"	"-0.00067"	"7/72"	"7"	"72"	"9606575.98883057"	"HCD"	"MS2"	"0"	"432.5"	"100.000"	"34.2840"	"8947"	"8947"	"8929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"609.8"	""	"594.4"	""	"617.5"	""	"691.1"	"10.7"	"774.0"	"798.7"	""	"775"	"47"	"35.000"	"28.000"	"0.000714943474932045"	"26"	"0.0001686"	"0.001181"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLAESAR"	"[R].nVLAESAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P56571"	"ES1 protein homolog, mitochondrial OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"544.81610"	"1088.62493"	"1088.62614"	"-1.11"	"-0.00061"	"7/72"	"7"	"72"	"9906605.01513672"	"HCD"	"MS2"	"1.338518"	"474.6"	"100.000"	"34.1459"	"8927"	"8927"	"8913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"660.0"	""	"659.4"	""	"680.9"	""	"773.0"	"16.1"	"815.3"	"890.3"	""	"775"	"47"	"35.000"	"28.000"	"0.000718243504073239"	"26"	"0.0001991"	"0.002898"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"544.82648"	"1088.64568"	"1088.64643"	"-0.69"	"-0.00038"	"4/56"	"4"	"56"	"324396.16973877"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"22.7401"	"4379"	"4379"	"4367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.4"	""	"35.4"	""	"35.8"	""	"45.9"	""	"43.5"	"47.4"	""	"962"	"24"	"36.000"	"29.000"	"0.210933265629768"	"17"	"0.007522"	"0.09617"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"544.82648"	"1088.64568"	"1088.64643"	"-0.69"	"-0.00038"	"7/56"	"7"	"56"	"557086.308959961"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"22.9031"	"4401"	"4401"	"4392"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"48.3"	""	"64.8"	""	"74.0"	""	"78.8"	"80.5"	""	"962"	"32"	"36.000"	"29.000"	"0.029386311397958"	"17"	"0.001615"	"0.01491"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"544.82660"	"1088.64592"	"1088.64643"	"-0.47"	"-0.00025"	"7/56"	"7"	"56"	"597253.316345215"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"22.1908"	"4177"	"4177"	"4163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.3"	""	"62.3"	""	"67.9"	""	"90.2"	""	"90.6"	"78.0"	""	"962"	"35"	"36.000"	"29.000"	"0.0158907749238708"	"19"	"0.0001686"	"0.001864"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"544.82672"	"1088.64617"	"1088.64643"	"-0.24"	"-0.00013"	"7/56"	"7"	"56"	"3936580.56292725"	"HCD"	"MS2"	"0"	"281.5"	"100.000"	"22.4596"	"4275"	"4275"	"4265"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"374.6"	""	"341.0"	""	"387.8"	""	"573.6"	""	"525.7"	"468.1"	""	"962"	"29"	"36.000"	"29.000"	"0.0584985466310904"	"18"	"0.0001991"	"0.00569"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGGK"	"[R].sAPGGGGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"544.82678"	"1088.64629"	"1088.64643"	"-0.13"	"-0.00007"	"7/56"	"7"	"56"	"4857364.01446533"	"HCD"	"MS2"	"0"	"327.6"	"100.000"	"22.6077"	"4293"	"4293"	"4288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"451.9"	""	"398.5"	""	"454.3"	""	"642.3"	""	"592.4"	"566.2"	""	"949"	"35"	"36.000"	"29.000"	"0.0159307497958282"	"18"	"0.0001991"	"0.004482"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"3"	"544.82898"	"1088.65068"	"1088.65129"	"-0.56"	"-0.00030"	"5/54"	"5"	"54"	"3449375.36260986"	"HCD"	"MS2"	"3.347253"	"133.6"	"100.000"	"86.0176"	"29955"	"29955"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.6"	""	"169.7"	""	"193.0"	""	"228.5"	""	"237.0"	"245.8"	""	"795"	"31"	"35.000"	"29.000"	"0.0353457444348534"	""	"0.002559"	"0.02531"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"3"	"544.82916"	"1088.65105"	"1088.65129"	"-0.22"	"-0.00012"	"9/54"	"9"	"54"	"696740.902099609"	"HCD"	"MS2"	"0"	"34.2"	"100.000"	"85.6650"	"29784"	"29784"	"29762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"44.0"	""	"50.9"	""	"59.2"	""	"57.1"	"65.8"	""	"795"	"23"	"35.000"	"29.000"	"0.219450782114101"	"29"	"0.001615"	"0.01328"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"3"	"544.82916"	"1088.65105"	"1088.65129"	"-0.22"	"-0.00012"	"6/54"	"6"	"54"	"1313470.35357666"	"HCD"	"MS2"	"3.640813"	"59.3"	"100.000"	"86.2599"	"30021"	"30021"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.4"	""	"74.7"	""	"88.5"	""	"97.7"	""	"112.4"	"108.1"	""	"795"	"27"	"35.000"	"29.000"	"0.0824778123188327"	""	"0.002588"	"0.02617"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"3"	"544.82922"	"1088.65117"	"1088.65129"	"-0.11"	"-0.00006"	"5/54"	"5"	"54"	"976615.950256348"	"HCD"	"MS2"	"8.552327"	"44.6"	"100.000"	"85.6992"	"29826"	"29826"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.7"	""	"55.1"	""	"61.8"	""	"69.7"	"1.4"	"82.6"	"85.3"	""	"795"	"29"	"35.000"	"29.000"	"0.0518008794434789"	""	"0.001453"	"0.01172"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"3"	"544.82922"	"1088.65117"	"1088.65129"	"-0.11"	"-0.00006"	"7/54"	"7"	"54"	"816225.509216309"	"HCD"	"MS2"	"4.674195"	"40.3"	"100.000"	"86.3169"	"30076"	"30076"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.2"	""	"49.7"	""	"58.1"	""	"65.8"	"1.9"	"69.4"	"74.2"	""	"795"	"24"	"35.000"	"29.000"	"0.166854196136425"	""	"0.001615"	"0.01481"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTLR"	"[K].lEDLTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"544.82928"	"1088.65129"	"1088.65129"	"0.00"	"0.00000"	"5/54"	"5"	"54"	"3354464.17895508"	"HCD"	"MS2"	"0.986374"	"129.2"	"100.000"	"85.9625"	"29903"	"29903"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.6"	""	"171.5"	""	"199.9"	""	"217.0"	""	"239.4"	"228.1"	""	"795"	"33"	"35.000"	"29.000"	"0.0221481335200442"	""	"0.002875"	"0.03112"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGASVVAIR"	"[K].sGASVVAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"544.83417"	"1088.66106"	"1088.66252"	"-1.35"	"-0.00073"	"6/70"	"6"	"70"	"5295895.53845215"	"HCD"	"MS2"	"7.397168"	"251.8"	"100.000"	"39.9056"	"11223"	"11223"	"11205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"339.5"	""	"384.8"	""	"382.1"	""	"391.7"	""	"457.5"	"432.1"	""	"740"	"38"	"35.000"	"28.000"	"0.00605622112928289"	"23"	"0"	"0.0002377"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGASVVAIR"	"[K].sGASVVAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"544.83490"	"1088.66252"	"1088.66252"	"0.00"	"0.00000"	"6/70"	"6"	"70"	"4597796.70483398"	"HCD"	"MS2"	"9.937517"	"217.4"	"100.000"	"39.7365"	"11189"	"11189"	"11169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"291.4"	""	"333.1"	""	"339.0"	""	"334.1"	""	"409.3"	"352.3"	""	"694"	"40"	"35.000"	"28.000"	"0.00354266000846565"	"23"	"9.9E-05"	"0.000446"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVWDLR"	"[R].aTVWDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"545.31635"	"1089.62541"	"1089.62541"	"0.00"	"0.00000"	"5/54"	"5"	"54"	"2793195.77539063"	"HCD"	"MS2"	"16.10801"	"111.1"	"100.000"	"78.2574"	"26811"	"26811"	"26797"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.2"	""	"152.3"	""	"155.0"	""	"176.2"	"1.0"	"203.3"	"210.5"	""	"1002"	"19"	"36.000"	"30.000"	"0.638025043589347"	"25"	"0.003568"	"0.03973"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVWDLR"	"[R].aTVWDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"545.31641"	"1089.62554"	"1089.62541"	"0.12"	"0.00006"	"5/54"	"5"	"54"	"1654447.48968506"	"HCD"	"MS2"	"4.390278"	"76.6"	"100.000"	"78.4622"	"26868"	"26868"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"97.2"	""	"109.4"	""	"125.5"	""	"149.2"	"148.0"	""	"1002"	"18"	"36.000"	"30.000"	"0.858692611061721"	"26"	"0.00329"	"0.03527"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVWDLR"	"[R].aTVWDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"545.31683"	"1089.62639"	"1089.62541"	"0.90"	"0.00049"	"5/54"	"5"	"54"	"2666430.93560791"	"HCD"	"MS2"	"20.59605"	"106.9"	"100.000"	"78.1581"	"26744"	"26744"	"26726"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.5"	""	"135.9"	""	"156.7"	""	"165.7"	""	"196.2"	"202.8"	""	"1002"	"19"	"36.000"	"30.000"	"0.624939140635714"	"25"	"0.004234"	"0.04982"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVWDLR"	"[R].aTVWDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"545.31689"	"1089.62651"	"1089.62541"	"1.01"	"0.00055"	"10/54"	"10"	"54"	"1534115.44226074"	"HCD"	"MS2"	"3.769578"	"72.6"	"100.000"	"78.5707"	"26939"	"26939"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.8"	""	"96.9"	""	"105.0"	""	"105.0"	""	"150.1"	"142.3"	""	"1002"	"17"	"36.000"	"30.000"	"1.0491503403813"	"26"	"0.00455"	"0.05405"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"545.79688"	"1090.58647"	"1090.58764"	"-1.07"	"-0.00059"	"6/58"	"6"	"58"	"5549224.98034668"	"HCD"	"MS2"	"19.38665"	"303.9"	"100.000"	"37.3590"	"10190"	"10190"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"371.3"	""	"389.1"	""	"386.9"	""	"460.6"	""	"620.3"	"657.6"	""	"755"	"35"	"35.000"	"28.000"	"0.0122156605490935"	"20"	"0.0001991"	"0.004497"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVDVGGQR"	"[KR].mVDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"5"	"Q6Q7Y5; P82471; Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1;Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2;Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q6Q7Y5; P19627; P82471; Q9JID2; Q63210"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1; Guanine nucleotide-binding protein G(z) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaz PE=2 SV=3; Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2; Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1; Guanine nucleotide-binding protein subunit alpha-12 OS=Rattus norvegicus OX=10116 GN=Gna12 PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"545.79742"	"1090.58757"	"1090.58764"	"-0.07"	"-0.00004"	"6/58"	"6"	"58"	"5574674.02850342"	"HCD"	"MS2"	"21.52171"	"291.4"	"100.000"	"37.2562"	"10186"	"10186"	"10169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"392.4"	""	"361.9"	""	"377.7"	""	"408.2"	""	"603.1"	"626.4"	""	"746"	"33"	"35.000"	"28.000"	"0.0168930797304051"	"22"	"0.0001991"	"0.002256"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEMELR"	"[K].aIEMELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"545.80981"	"1090.61235"	"1090.61280"	"-0.41"	"-0.00022"	"5/52"	"5"	"52"	"1767247.56842041"	"HCD"	"MS2"	"38.16478"	"97.3"	"100.000"	"65.0294"	"21455"	"21455"	"21434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.8"	""	"127.7"	""	"116.6"	""	"151.4"	""	"198.3"	"213.9"	""	"843"	"14"	"36.000"	"29.000"	"1.75710445132746"	"17"	"0.004819"	"0.05889"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEMELR"	"[K].aIEMELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"545.81000"	"1090.61272"	"1090.61280"	"-0.07"	"-0.00004"	"5/52"	"5"	"52"	"1783373.82226563"	"HCD"	"MS2"	"37.53413"	"105.1"	"100.000"	"65.0582"	"21433"	"21433"	"21410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.3"	""	"135.7"	""	"131.9"	""	"162.5"	""	"211.2"	"221.7"	""	"843"	"13"	"36.000"	"29.000"	"2.22739673623239"	"18"	"0.00307"	"0.03322"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLATQATR"	"[K].tLATQATR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLN7"	"ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Arfgap3 PE=1 SV=1"	"Q4KLN7"	"ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Arfgap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"545.82422"	"1090.64116"	"1090.64179"	"-0.58"	"-0.00031"	"6/74"	"6"	"74"	"2306455.77081299"	"HCD"	"MS2"	"0"	"135.3"	"100.000"	"25.9379"	"5608"	"5608"	"5587"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.9"	""	"148.3"	""	"169.8"	""	"244.0"	""	"279.3"	"266.4"	""	"642"	"42"	"35.000"	"28.000"	"0.00220548969244568"	""	"0.0001991"	"0.002203"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLATQATR"	"[K].tLATQATR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLN7"	"ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Arfgap3 PE=1 SV=1"	"Q4KLN7"	"ADP-ribosylation factor GTPase-activating protein 3 OS=Rattus norvegicus OX=10116 GN=Arfgap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"545.82434"	"1090.64141"	"1090.64179"	"-0.35"	"-0.00019"	"6/74"	"6"	"74"	"2235163.15203857"	"HCD"	"MS2"	"0"	"134.1"	"100.000"	"25.8278"	"5603"	"5603"	"5577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.2"	""	"155.4"	""	"177.5"	""	"245.5"	""	"267.8"	"262.4"	""	"642"	"45"	"35.000"	"28.000"	"0.000989703332030043"	""	"9.9E-05"	"0.0007174"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIYAPIR"	"[R].eIYAPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8B7"	"Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hsdl1 PE=2 SV=1"	"Q4V8B7"	"Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hsdl1 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"545.82568"	"1090.64409"	"1090.64581"	"-1.58"	"-0.00086"	"5/48"	"5"	"48"	"1748778.07385254"	"HCD"	"MS2"	"42.32454"	"74.8"	"100.000"	"57.0766"	"18225"	"18225"	"18209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.6"	""	"80.0"	""	"99.1"	""	"133.2"	""	"158.5"	"163.2"	""	"619"	"14"	"34.000"	"27.000"	"1.16321676627273"	"17"	"0.00714"	"0.09161"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIYAPIR"	"[R].eIYAPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8B7"	"Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hsdl1 PE=2 SV=1"	"Q4V8B7"	"Inactive hydroxysteroid dehydrogenase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hsdl1 PE=2 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"545.82629"	"1090.64531"	"1090.64581"	"-0.46"	"-0.00025"	"6/48"	"6"	"48"	"1647195.7177124"	"HCD"	"MS2"	"35.30575"	"77.0"	"100.000"	"57.2841"	"18275"	"18275"	"18250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.3"	""	"94.4"	""	"103.1"	""	"135.7"	""	"159.1"	"159.7"	""	"713"	"18"	"35.000"	"28.000"	"0.540828455999254"	"21"	"0.004314"	"0.05082"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"546.30701"	"1091.60674"	"1091.60805"	"-1.20"	"-0.00065"	"5/66"	"5"	"66"	"12275058.2449341"	"HCD"	"MS2"	"4.481613"	"575.7"	"100.000"	"43.9299"	"12892"	"12892"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1275.1"	""	"803.9"	""	"587.1"	""	"720.7"	"9.9"	"989.5"	"1058.6"	""	"801"	"31"	"36.000"	"29.000"	"0.0352048517990769"	"26"	"0.003568"	"0.03965"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"546.30725"	"1091.60723"	"1091.60805"	"-0.75"	"-0.00041"	"5/66"	"5"	"66"	"1972103.38433838"	"HCD"	"MS2"	"0"	"133.2"	"100.000"	"44.4323"	"13062"	"13062"	"13041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.8"	""	"185.1"	""	"161.1"	""	"175.3"	"8.2"	"230.0"	"242.1"	""	"799"	"22"	"36.000"	"29.000"	"0.275116592389538"	"27"	"0.00296"	"0.03196"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"546.30731"	"1091.60735"	"1091.60805"	"-0.64"	"-0.00035"	"6/66"	"6"	"66"	"2082411.09277344"	"HCD"	"MS2"	"5.953217"	"138.4"	"100.000"	"44.2402"	"13019"	"13019"	"13001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"257.9"	""	"187.0"	""	"165.0"	""	"186.1"	"8.3"	"240.5"	"265.2"	""	"799"	"22"	"36.000"	"29.000"	"0.254986262733124"	"27"	"0.002462"	"0.02306"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQLMER"	"[R].sVQLMER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"546.30743"	"1091.60759"	"1091.60805"	"-0.42"	"-0.00023"	"5/66"	"5"	"66"	"12319406.3780518"	"HCD"	"MS2"	"1.382402"	"619.8"	"100.000"	"44.1131"	"12931"	"12931"	"12913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1364.1"	""	"889.5"	""	"622.4"	""	"744.8"	"18.3"	"1048.1"	"1175.6"	""	"797"	"30"	"36.000"	"29.000"	"0.0355982235267718"	"26"	"0.00307"	"0.03293"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSPSGK"	"[K].aSSPSGk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"546.32593"	"1091.64458"	"1091.64609"	"-1.39"	"-0.00076"	"6/54"	"6"	"54"	"599072.089538574"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"21.9301"	"4079"	"4079"	"4068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"75.2"	""	"62.1"	""	"78.6"	"0.2"	"99.3"	"100.0"	""	"587"	"18"	"34.000"	"27.000"	"0.467313261389519"	"18"	"0.009382"	"0.1222"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSPSGK"	"[K].aSSPSGk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"546.32599"	"1091.64470"	"1091.64609"	"-1.28"	"-0.00070"	"6/54"	"6"	"54"	"755773.89666748"	"HCD"	"MS2"	"0"	"67.0"	"100.000"	"21.9943"	"4064"	"4064"	"4058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.5"	""	"78.5"	""	"96.7"	""	"108.5"	""	"131.8"	"126.5"	""	"587"	"30"	"34.000"	"27.000"	"0.0273910137283917"	"26"	"0.003818"	"0.04114"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSPSGK"	"[K].aSSPSGk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"546.32629"	"1091.64531"	"1091.64609"	"-0.72"	"-0.00039"	"6/54"	"6"	"54"	"477932.019775391"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"21.6540"	"3978"	"3978"	"3958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.5"	""	"55.3"	""	"54.8"	""	"87.9"	""	"98.2"	"98.6"	""	"583"	"25"	"34.000"	"27.000"	"0.0954198125571813"	"22"	"0.006423"	"0.08026"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAASSAK"	"[R].vAASSAk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LU71"	"Methylglutaconyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Auh PE=1 SV=2"	"F1LU71"	"Methylglutaconyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Auh PE=1 SV=2"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"546.34430"	"1091.68132"	"1091.68248"	"-1.06"	"-0.00058"	"6/50"	"6"	"50"	"1762659.96960449"	"HCD"	"MS2"	"0"	"143.1"	"100.000"	"27.1135"	"6097"	"6097"	"6088"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.3"	""	"190.9"	""	"202.7"	""	"223.9"	""	"272.8"	"263.1"	""	"191"	"38"	"29.000"	"22.000"	"0.00166726015603908"	""	"0.0001991"	"0.004941"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAASSAK"	"[R].vAASSAk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LU71"	"Methylglutaconyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Auh PE=1 SV=2"	"F1LU71"	"Methylglutaconyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Auh PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"546.34448"	"1091.68169"	"1091.68248"	"-0.73"	"-0.00040"	"6/50"	"6"	"50"	"1789928.78851318"	"HCD"	"MS2"	"0"	"140.3"	"100.000"	"27.3323"	"6147"	"6147"	"6132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.7"	""	"174.7"	""	"215.5"	""	"212.9"	"1.0"	"253.5"	"252.7"	""	"191"	"29"	"29.000"	"22.000"	"0.0113240915449964"	""	"0.001488"	"0.01198"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"546.79742"	"1092.58757"	"1092.58869"	"-1.02"	"-0.00056"	"9/54"	"9"	"54"	"2729333.01104736"	"HCD"	"MS2"	"4.018394"	"140.5"	"100.000"	"47.6851"	"14377"	"14377"	"14361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.4"	""	"187.1"	""	"182.7"	""	"230.3"	""	"284.3"	"266.7"	""	"660"	"20"	"35.000"	"28.000"	"0.337686687452649"	"22"	"0.003208"	"0.03466"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"546.79749"	"1092.58769"	"1092.58869"	"-0.91"	"-0.00050"	"5/54"	"5"	"54"	"1682867.13458252"	"HCD"	"MS2"	"17.42168"	"98.9"	"100.000"	"47.4990"	"14339"	"14339"	"14319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.1"	""	"123.1"	""	"130.5"	""	"161.0"	"1.0"	"202.6"	"188.6"	""	"664"	"14"	"35.000"	"28.000"	"1.40649464728448"	"22"	"0.004751"	"0.05616"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"546.79773"	"1092.58818"	"1092.58869"	"-0.46"	"-0.00025"	"5/56"	"5"	"56"	"5055436.3861084"	"HCD"	"MS2"	"4.799816"	"213.8"	"100.000"	"63.2487"	"20700"	"20700"	"20684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.8"	""	"240.8"	""	"141.7"	""	"497.0"	""	"476.3"	"390.3"	""	"721"	"24"	"35.000"	"28.000"	"0.14252966653456"	""	"0.00394"	"0.04286"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"546.79785"	"1092.58843"	"1092.58869"	"-0.24"	"-0.00013"	"8/54"	"8"	"54"	"3964897.79760742"	"HCD"	"MS2"	"18.76519"	"181.1"	"100.000"	"47.3747"	"14251"	"14251"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.8"	""	"245.1"	""	"235.6"	""	"303.9"	""	"333.1"	"331.3"	""	"721"	"24"	"35.000"	"28.000"	"0.142201857398138"	"25"	"0.002834"	"0.03064"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDAYER"	"[K].lPDAYER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"546.79791"	"1092.58855"	"1092.58869"	"-0.13"	"-0.00007"	"8/54"	"8"	"54"	"4301739.40869141"	"HCD"	"MS2"	"3.113021"	"183.2"	"100.000"	"47.1859"	"14212"	"14212"	"14193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"277.2"	""	"239.2"	""	"246.1"	""	"297.0"	""	"349.4"	"329.7"	""	"721"	"25"	"35.000"	"28.000"	"0.111148925606489"	"27"	"0.002588"	"0.02706"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"546.79797"	"1092.58867"	"1092.58869"	"-0.02"	"-0.00001"	"4/56"	"4"	"56"	"3721897.60125732"	"HCD"	"MS2"	"1.408424"	"170.4"	"100.000"	"62.9821"	"20623"	"20623"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"245.3"	""	"206.2"	""	"119.3"	""	"382.6"	""	"352.7"	"314.4"	""	"721"	"20"	"35.000"	"28.000"	"0.368897123717212"	"25"	"0.003786"	"0.04042"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"546.79797"	"1092.58867"	"1092.58869"	"-0.02"	"-0.00001"	"5/56"	"5"	"56"	"3622402.40618896"	"HCD"	"MS2"	"7.984608"	"162.3"	"100.000"	"63.3002"	"20752"	"20752"	"20734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.9"	""	"183.4"	""	"117.2"	""	"358.4"	"1.5"	"338.1"	"302.2"	""	"721"	"25"	"35.000"	"28.000"	"0.124998634588138"	"28"	"0.002628"	"0.02746"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPSLR"	"[K].eDFPSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"546.79840"	"1092.58953"	"1092.58869"	"0.76"	"0.00042"	"6/56"	"6"	"56"	"2668260.71069336"	"HCD"	"MS2"	"4.41264"	"124.5"	"100.000"	"62.9631"	"20583"	"20583"	"20561"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.6"	""	"159.6"	""	"107.3"	""	"266.8"	""	"256.2"	"215.5"	""	"719"	"19"	"35.000"	"28.000"	"0.427266550763608"	"25"	"0.00307"	"0.03423"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLmER.[D]"	"N-Term(TMT6plex); M5(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"546.79926"	"1092.59123"	"1092.59206"	"-0.76"	"-0.00041"	"5/54"	"5"	"54"	"731992.512756348"	"HCD"	"MS2"	"10.43416"	"37.4"	"100.000"	"71.9871"	"24247"	"24247"	"24223"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.7"	""	"55.1"	""	"56.7"	""	"57.7"	""	"67.2"	"71.1"	""	"681"	"23"	"35.000"	"28.000"	"0.167925680246656"	"22"	"0.006777"	"0.08441"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLmER.[D]"	"N-Term(TMT6plex); M5(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"546.79944"	"1092.59160"	"1092.59206"	"-0.42"	"-0.00023"	"6/54"	"6"	"54"	"1058303.69384766"	"HCD"	"MS2"	"41.72249"	"55.5"	"100.000"	"61.2381"	"19886"	"19886"	"19865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.2"	""	"70.3"	""	"83.7"	""	"82.3"	""	"103.2"	"113.1"	""	"680"	"13"	"35.000"	"28.000"	"1.80085570923164"	"16"	"0.009348"	"0.1216"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLMER"	"[K].lADLmER.[D]"	"N-Term(TMT6plex); M5(Oxidation)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"546.79944"	"1092.59160"	"1092.59206"	"-0.42"	"-0.00023"	"6/54"	"6"	"54"	"2321333.11590576"	"HCD"	"MS2"	"22.37144"	"109.3"	"100.000"	"49.1589"	"15011"	"15011"	"14999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.5"	"2.5"	"135.6"	""	"149.3"	""	"217.8"	""	"190.0"	"196.8"	""	"680"	"15"	"35.000"	"28.000"	"1.00572423862753"	"21"	"0.009635"	"0.1282"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"546.80243"	"1092.59758"	"1092.59859"	"-0.92"	"-0.00050"	"6/72"	"6"	"72"	"1102534.73931885"	"HCD"	"MS2"	"33.08369"	"34.2"	"100.000"	"110.8360"	"39860"	"39860"	"39836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.3"	""	"37.5"	""	"43.4"	""	"70.9"	""	"64.6"	"70.2"	""	"664"	"32"	"35.000"	"28.000"	"0.0226536446455035"	"16"	"0.001872"	"0.01562"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLIDSLT"	"[R].dSLIDSLT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"546.80286"	"1092.59844"	"1092.59859"	"-0.14"	"-0.00007"	"6/72"	"6"	"72"	"1196546.144104"	"HCD"	"MS2"	"25.31177"	"33.6"	"100.000"	"110.7365"	"39806"	"39806"	"39783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"40.5"	""	"33.9"	""	"76.3"	""	"75.5"	"59.3"	""	"666"	"33"	"35.000"	"28.000"	"0.0160488616609167"	"21"	"0.001872"	"0.01567"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYVGVVNR"	"[R].gYVGVVNR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"Q08877"	"Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"546.82056"	"1092.63384"	"1092.63631"	"-2.26"	"-0.00124"	"7/60"	"7"	"60"	"1847535.51715088"	"HCD"	"MS2"	"26.79757"	"159.4"	"100.000"	"39.3534"	"11001"	"11001"	"10984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.9"	""	"186.2"	""	"202.2"	""	"254.4"	""	"343.3"	"321.9"	""	"545"	"13"	"34.000"	"27.000"	"1.25131458498047"	"17"	"0.002628"	"0.02764"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPGGHVGR"	"[K].lAPGGHVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.7170"	"0.0000"	"1"	"1"	"1"	"364.88690"	"1092.64615"	"1092.64754"	"-1.27"	"-0.00046"	"8/66"	"8"	"66"	"31889574.4903564"	"HCD"	"MS2"	"9.393948"	"350.4"	"57.363"	"24.1610"	"4893"	"4893"	"4871"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"479.6"	""	"461.9"	""	"529.6"	""	"563.7"	"9.0"	"646.6"	"629.4"	""	"493"	"53"	"33.000"	"26.000"	"0.000113192310164288"	""	"0"	"0.000203"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPGGHVGR"	"[K].lAPGGHVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"3"	"3"	"0.7347"	"0.0000"	"1"	"1"	"1"	"364.88693"	"1092.64624"	"1092.64754"	"-1.19"	"-0.00043"	"8/66"	"8"	"66"	"25598029.9776001"	"HCD"	"MS2"	"11.00042"	"458.1"	"100.000"	"24.0961"	"4904"	"4904"	"4882"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"619.1"	""	"621.7"	""	"693.6"	""	"717.8"	"15.9"	"837.1"	"834.5"	""	"493"	"49"	"33.000"	"26.000"	"0.000340264721224611"	""	"0"	"0.0003658"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPGGHVGR"	"[K].lAPGGHVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"546.82709"	"1092.64690"	"1092.64754"	"-0.59"	"-0.00032"	"5/66"	"5"	"66"	"5011621.66943359"	"HCD"	"MS2"	"0"	"350.0"	"100.000"	"24.1374"	"4921"	"4921"	"4898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"431.3"	""	"449.4"	""	"469.2"	""	"600.7"	""	"698.6"	"679.4"	""	"465"	"17"	"33.000"	"26.000"	"0.477994563566313"	"18"	"0.007953"	"0.1007"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPGGHVGR"	"[K].lAPGGHVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"546.82733"	"1092.64739"	"1092.64754"	"-0.14"	"-0.00008"	"5/66"	"5"	"66"	"6588015.38897705"	"HCD"	"MS2"	"0"	"309.8"	"100.000"	"24.1747"	"4899"	"4899"	"4871"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"407.1"	"3.0"	"420.7"	""	"449.5"	""	"528.0"	""	"574.0"	"555.6"	""	"459"	"23"	"33.000"	"26.000"	"0.107592671202338"	"17"	"0.002525"	"0.02498"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEFVILR"	"[K].sEFVILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"546.83411"	"1092.66094"	"1092.66146"	"-0.48"	"-0.00026"	"5/50"	"5"	"50"	"490397.789672852"	"HCD"	"MS2"	"11.29653"	"29.8"	"100.000"	"83.2963"	"28827"	"28827"	"28805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"33.0"	""	"49.9"	""	"39.4"	""	"59.8"	"57.3"	""	"355"	"27"	"32.000"	"25.000"	"0.032523580997089"	"19"	"0.002559"	"0.02549"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEFVILR"	"[K].sEFVILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"546.83411"	"1092.66094"	"1092.66146"	"-0.48"	"-0.00026"	"9/50"	"9"	"50"	"495289.79901123"	"HCD"	"MS2"	"18.00929"	"31.4"	"100.000"	"83.5770"	"28969"	"28969"	"28949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"47.5"	""	"45.7"	""	"49.7"	""	"65.2"	"57.8"	""	"355"	"22"	"32.000"	"25.000"	"0.118358201535418"	"21"	"0.0042"	"0.0451"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEFVILR"	"[K].sEFVILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"546.83417"	"1092.66106"	"1092.66146"	"-0.37"	"-0.00020"	"4/50"	"4"	"50"	"332374.279174805"	"HCD"	"MS2"	"30.68202"	"22.6"	"100.000"	"83.6331"	"28963"	"28963"	"28945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"26.8"	""	"39.9"	""	"38.7"	""	"42.1"	"36.9"	""	"355"	"17"	"32.000"	"25.000"	"0.354159060906976"	"15"	"0.00452"	"0.05271"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEFVILR"	"[K].sEFVILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"546.83429"	"1092.66130"	"1092.66146"	"-0.15"	"-0.00008"	"4/50"	"4"	"50"	"384177.06451416"	"HCD"	"MS2"	"51.4463"	"24.4"	"100.000"	"83.2680"	"28844"	"28844"	"28820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"38.1"	""	"33.7"	""	"36.8"	""	"42.5"	"41.6"	""	"355"	"25"	"32.000"	"25.000"	"0.0609815357522277"	"20"	"0.004234"	"0.04902"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPIVHR"	"[R].eIPIVHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"364.89542"	"1092.67170"	"1092.67269"	"-0.91"	"-0.00033"	"5/48"	"5"	"48"	"2432023.42730713"	"HCD"	"MS2"	"14.25713"	"50.9"	"100.000"	"39.5463"	"11113"	"11113"	"11099"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"67.1"	""	"73.2"	""	"89.0"	"1.9"	"98.7"	"94.7"	""	"277"	"27"	"31.000"	"24.000"	"0.0291373313907657"	""	"0.0005778"	"0.007106"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPIVHR"	"[R].eIPIVHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"P42667"	"Signal peptidase complex catalytic subunit SEC11A OS=Rattus norvegicus OX=10116 GN=Sec11a PE=2 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"364.89575"	"1092.67270"	"1092.67269"	"0.01"	"0.00000"	"8/48"	"8"	"48"	"2931020.42126465"	"HCD"	"MS2"	"6.08643"	"50.5"	"100.000"	"39.6488"	"11120"	"11120"	"11101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.6"	""	"64.0"	""	"67.8"	""	"80.6"	""	"108.6"	"95.8"	""	"231"	"27"	"30.000"	"23.000"	"0.0205864747640254"	""	"0.003786"	"0.04095"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"547.29474"	"1093.58220"	"1093.58394"	"-1.59"	"-0.00087"	"7/62"	"7"	"62"	"1461311.71679688"	"HCD"	"MS2"	"29.77121"	"83.8"	"100.000"	"60.7915"	"19736"	"19736"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.7"	""	"98.2"	""	"99.6"	""	"146.3"	""	"179.1"	"179.6"	""	"617"	"24"	"34.000"	"27.000"	"0.126256913526708"	"23"	"0.001348"	"0.01066"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"547.29492"	"1093.58257"	"1093.58394"	"-1.25"	"-0.00069"	"10/62"	"10"	"62"	"1987941.70532227"	"HCD"	"MS2"	"2.919456"	"97.2"	"100.000"	"60.4992"	"19617"	"19617"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.4"	""	"112.7"	""	"114.5"	""	"181.9"	""	"205.2"	"208.2"	""	"608"	"31"	"34.000"	"27.000"	"0.0245965153350228"	"26"	"0.0001686"	"0.001103"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGDAAR"	"[K].iDFGDAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P10824"	"Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"547.29547"	"1093.58367"	"1093.58394"	"-0.25"	"-0.00014"	"11/62"	"11"	"62"	"2173738.35870361"	"HCD"	"MS2"	"2.216519"	"115.3"	"100.000"	"60.6603"	"19650"	"19650"	"19632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.1"	""	"133.2"	""	"114.9"	""	"213.0"	"0.7"	"238.5"	"265.4"	""	"630"	"32"	"34.000"	"27.000"	"0.0182940791519213"	"24"	"0.0001686"	"0.001133"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPSVDSR"	"[R].gFPSVDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"547.29547"	"1093.58367"	"1093.58394"	"-0.25"	"-0.00014"	"6/62"	"6"	"62"	"4457926.95172119"	"HCD"	"MS2"	"42.20065"	"263.8"	"100.000"	"45.5514"	"13551"	"13551"	"13528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.7"	""	"266.4"	""	"257.6"	""	"473.5"	""	"592.6"	"600.4"	""	"630"	"21"	"34.000"	"27.000"	"0.241718869148973"	"27"	"0.005266"	"0.0679"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFPSVDSR"	"[R].gFPSVDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"547.29565"	"1093.58403"	"1093.58394"	"0.08"	"0.00005"	"4/62"	"4"	"62"	"4611024.05108643"	"HCD"	"MS2"	"35.64788"	"280.6"	"100.000"	"45.8219"	"13627"	"13627"	"13605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"331.7"	""	"311.2"	""	"294.9"	""	"515.3"	""	"591.1"	"627.8"	""	"620"	"21"	"34.000"	"27.000"	"0.221493861083409"	"21"	"0.004959"	"0.06162"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLVDSR"	"[R].fQLVDSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"547.31311"	"1093.61894"	"1093.62032"	"-1.26"	"-0.00069"	"5/60"	"5"	"60"	"2771007.04400635"	"HCD"	"MS2"	"18.89979"	"117.1"	"100.000"	"63.8989"	"20964"	"20964"	"20946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.0"	""	"153.1"	""	"154.2"	""	"213.6"	""	"199.5"	"206.1"	""	"567"	"37"	"34.000"	"27.000"	"0.00578832707313812"	""	"0.006237"	"0.07616"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLVDSR"	"[R].fQLVDSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"547.31311"	"1093.61894"	"1093.62032"	"-1.26"	"-0.00069"	"5/60"	"5"	"60"	"2032186.23931885"	"HCD"	"MS2"	"37.64403"	"98.4"	"100.000"	"63.7946"	"20954"	"20954"	"20937"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.2"	""	"119.4"	""	"126.6"	""	"185.8"	""	"181.5"	"171.4"	""	"567"	"36"	"34.000"	"27.000"	"0.0068478314656514"	""	"0.006074"	"0.07445"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLVDSR"	"[R].fQLVDSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"547.31323"	"1093.61919"	"1093.62032"	"-1.04"	"-0.00057"	"5/60"	"5"	"60"	"4758792.84667969"	"HCD"	"MS2"	"5.644726"	"201.5"	"100.000"	"64.0923"	"21074"	"21074"	"21056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"311.4"	""	"285.2"	""	"295.7"	""	"301.9"	""	"341.7"	"375.8"	""	"567"	"37"	"34.000"	"27.000"	"0.00527901703243923"	""	"0.004852"	"0.05959"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEQTLR"	"[K].fAEQTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"547.31335"	"1093.61943"	"1093.62032"	"-0.82"	"-0.00045"	"5/58"	"5"	"58"	"3961419.17181396"	"HCD"	"MS2"	"19.73458"	"290.2"	"100.000"	"44.6756"	"13194"	"13194"	"13174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"372.2"	""	"366.0"	""	"383.7"	""	"421.3"	""	"564.4"	"654.2"	""	"564"	"20"	"34.000"	"27.000"	"0.274947077836303"	"19"	"0.004792"	"0.05674"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLVDSR"	"[R].fQLVDSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"547.31342"	"1093.61955"	"1093.62032"	"-0.70"	"-0.00039"	"5/60"	"5"	"60"	"4177051.62634277"	"HCD"	"MS2"	"4.245741"	"176.7"	"100.000"	"64.1833"	"21078"	"21078"	"21063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"278.2"	""	"236.7"	""	"264.3"	""	"259.1"	"0.7"	"305.7"	"327.9"	""	"566"	"35"	"34.000"	"27.000"	"0.0099034482269025"	""	"0.005266"	"0.06679"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEQTLR"	"[K].fAEQTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"547.31342"	"1093.61955"	"1093.62032"	"-0.70"	"-0.00039"	"5/58"	"5"	"58"	"3374317.00195313"	"HCD"	"MS2"	"31.93304"	"254.9"	"100.000"	"44.8495"	"13231"	"13231"	"13210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.6"	""	"332.8"	""	"339.3"	""	"345.9"	""	"520.6"	"574.6"	""	"566"	"19"	"34.000"	"27.000"	"0.325676510071275"	"23"	"0.004959"	"0.0619"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQTIAR"	"[K].eFQTIAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"547.31348"	"1093.61968"	"1093.62032"	"-0.59"	"-0.00032"	"5/62"	"5"	"62"	"6386010.89056396"	"HCD"	"MS2"	"24.69638"	"382.0"	"100.000"	"43.8831"	"12837"	"12837"	"12825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"586.9"	""	"502.7"	""	"487.4"	""	"652.7"	""	"696.4"	"697.7"	""	"568"	"26"	"34.000"	"27.000"	"0.0738445315938937"	"24"	"0.009411"	"0.1243"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLFVGR"	"[K].gESLFVGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9Z6"	"Tumor-associated calcium signal transducer 2 OS=Rattus norvegicus OX=10116 GN=Tacstd2 PE=2 SV=1"	"Q6P9Z6"	"Tumor-associated calcium signal transducer 2 OS=Rattus norvegicus OX=10116 GN=Tacstd2 PE=2 SV=1"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"547.31366"	"1093.62004"	"1093.62032"	"-0.26"	"-0.00014"	"7/58"	"7"	"58"	"2082782.6060791"	"HCD"	"MS2"	"0"	"100.7"	"100.000"	"55.9729"	"17749"	"17749"	"17730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.9"	""	"138.3"	""	"126.9"	""	"170.7"	""	"211.4"	"208.8"	""	"568"	"18"	"34.000"	"27.000"	"0.412399699394919"	"27"	"0.0009352"	"0.007864"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQTIAR"	"[K].eFQTIAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"547.31372"	"1093.62016"	"1093.62032"	"-0.15"	"-0.00008"	"5/62"	"5"	"62"	"6196998.00415039"	"HCD"	"MS2"	"31.8436"	"370.4"	"100.000"	"43.6973"	"12797"	"12797"	"12778"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"566.4"	""	"494.8"	""	"487.0"	""	"624.7"	""	"682.7"	"657.4"	""	"568"	"26"	"34.000"	"27.000"	"0.0723299791734152"	"24"	"0.008255"	"0.105"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVNDTLR"	"[R].fVNDTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJP2"	"Spliceosome-associated protein CWC15 homolog OS=Rattus norvegicus OX=10116 GN=Cwc15 PE=1 SV=1"	"Q5BJP2"	"Spliceosome-associated protein CWC15 homolog OS=Rattus norvegicus OX=10116 GN=Cwc15 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"547.31384"	"1093.62041"	"1093.62032"	"0.08"	"0.00004"	"6/58"	"6"	"58"	"793161.094238281"	"HCD"	"MS2"	"34.38904"	"56.1"	"100.000"	"54.2634"	"17087"	"17087"	"17063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.0"	""	"67.0"	""	"83.6"	""	"96.6"	"0.6"	"92.0"	"113.3"	""	"554"	"14"	"34.000"	"27.000"	"1.10022059203035"	"21"	"0.007443"	"0.09476"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDLGLPNR"	"[K].YFDLGLPNR.[D]"	""	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"547.78406"	"1094.56084"	"1094.56292"	"-1.90"	"-0.00104"	"6/66"	"6"	"66"	"534027.827392578"	"HCD"	"MS2"	"22.31644"	"17.7"	"100.000"	"85.8703"	"29866"	"29866"	"29844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.4"	""	"25.4"	""	"23.4"	""	"26.9"	"1.7"	"29.9"	"37.8"	"NoQuanLabels"	"488"	"20"	"33.000"	"26.000"	"0.237350322601579"	"15"	"0.00511"	"0.06526"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"547.80536"	"1094.60344"	"1094.60434"	"-0.82"	"-0.00045"	"6/58"	"6"	"58"	"6502809.72497559"	"HCD"	"MS2"	"0"	"308.2"	"100.000"	"56.1021"	"17832"	"17832"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"534.7"	""	"422.1"	""	"429.3"	""	"472.9"	""	"531.7"	"527.0"	""	"541"	"34"	"34.000"	"27.000"	"0.0110705008456968"	""	"0.002419"	"0.02277"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFVISDR"	"[K].eFVISDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"547.80536"	"1094.60344"	"1094.60434"	"-0.82"	"-0.00045"	"6/58"	"6"	"58"	"6526216.22387695"	"HCD"	"MS2"	"0"	"280.8"	"100.000"	"56.3351"	"17892"	"17892"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"507.7"	""	"389.2"	""	"367.3"	""	"450.8"	""	"475.5"	"465.5"	""	"541"	"34"	"34.000"	"27.000"	"0.0110705008456968"	""	"0.001453"	"0.01193"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FISETLR"	"[K].fISETLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"547.82373"	"1094.64018"	"1094.64073"	"-0.49"	"-0.00027"	"5/52"	"5"	"52"	"1755883.82958984"	"HCD"	"MS2"	"32.45299"	"91.8"	"100.000"	"69.1811"	"23139"	"23139"	"23120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.7"	""	"137.6"	""	"144.4"	""	"134.1"	""	"147.7"	"181.6"	""	"401"	"29"	"33.000"	"26.000"	"0.025241454506473"	"20"	"0.00394"	"0.04277"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FISETLR"	"[K].fISETLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"547.82379"	"1094.64031"	"1094.64073"	"-0.38"	"-0.00021"	"5/52"	"5"	"52"	"1420836.95849609"	"HCD"	"MS2"	"36.75284"	"81.7"	"100.000"	"69.0829"	"23065"	"23065"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.2"	""	"119.0"	""	"115.6"	""	"119.8"	""	"136.8"	"170.1"	""	"401"	"20"	"33.000"	"26.000"	"0.203757862920574"	""	"0.003786"	"0.04067"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVVHELR"	"[K].nVVHELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"365.88681"	"1095.64588"	"1095.64721"	"-1.21"	"-0.00044"	"6/60"	"6"	"60"	"14765940.1368408"	"HCD"	"MS2"	"67.62222"	"367.9"	"55.589"	"26.1215"	"5721"	"5721"	"5707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"369.6"	""	"401.9"	""	"449.4"	""	"647.0"	""	"869.2"	"791.8"	""	"324"	"28"	"32.000"	"25.000"	"0.023961555888325"	"20"	"0.002189"	"0.02141"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVVHELR"	"[K].nVVHELR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"365.88690"	"1095.64615"	"1095.64721"	"-0.96"	"-0.00035"	"6/60"	"6"	"60"	"13092848.1890869"	"HCD"	"MS2"	"56.04507"	"435.2"	"83.620"	"26.2728"	"5743"	"5743"	"5724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"412.0"	""	"464.3"	""	"537.1"	""	"752.7"	""	"1048.0"	"938.3"	""	"324"	"29"	"32.000"	"25.000"	"0.0223107933960819"	"19"	"0.002166"	"0.01975"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGHDILVR"	"[R].gGHDILVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"365.88693"	"1095.64624"	"1095.64721"	"-0.88"	"-0.00032"	"9/56"	"9"	"56"	"8055072.25836182"	"HCD"	"MS2"	"42.1611"	"365.3"	"100.000"	"27.5961"	"6253"	"6253"	"6233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"436.7"	""	"423.9"	""	"457.8"	""	"676.4"	""	"765.6"	"719.0"	""	"324"	"15"	"32.000"	"25.000"	"0.470451670023241"	""	"0.00212"	"0.01924"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGHDILVR"	"[R].gGHDILVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"Q4AEF8"	"Coatomer subunit gamma-1 OS=Rattus norvegicus OX=10116 GN=Copg1 PE=2 SV=1"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"365.88718"	"1095.64698"	"1095.64721"	"-0.21"	"-0.00008"	"10/56"	"10"	"56"	"6545461.5378418"	"HCD"	"MS2"	"42.73573"	"282.8"	"100.000"	"27.3497"	"6192"	"6192"	"6180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"331.9"	""	"334.2"	""	"355.6"	""	"506.9"	""	"608.1"	"555.0"	""	"224"	"17"	"30.000"	"23.000"	"0.218886019046844"	"21"	"0.001348"	"0.01143"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATQFTGR"	"[K].sATQFTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"548.80023"	"1096.59319"	"1096.59484"	"-1.51"	"-0.00083"	"6/74"	"6"	"74"	"2932468.41326904"	"HCD"	"MS2"	"0"	"163.0"	"100.000"	"29.3466"	"6999"	"6999"	"6974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.3"	""	"206.6"	""	"220.1"	""	"259.4"	""	"294.8"	"333.4"	""	"408"	"38"	"33.000"	"26.000"	"0.00340118431360417"	"22"	"0.0001991"	"0.002466"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATQFTGR"	"[K].sATQFTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"548.80078"	"1096.59429"	"1096.59484"	"-0.50"	"-0.00028"	"6/74"	"6"	"74"	"2289924.17681885"	"HCD"	"MS2"	"0"	"134.7"	"100.000"	"29.6355"	"7116"	"7116"	"7101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.9"	""	"178.4"	""	"180.4"	""	"206.0"	""	"255.3"	"263.2"	""	"380"	"38"	"32.000"	"25.000"	"0.00300437127461373"	"20"	"9.9E-05"	"0.0008786"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATQFTGR"	"[K].sATQFTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"548.80090"	"1096.59453"	"1096.59484"	"-0.28"	"-0.00015"	"6/74"	"6"	"74"	"1876543.6361084"	"HCD"	"MS2"	"0"	"124.5"	"100.000"	"29.8318"	"7155"	"7155"	"7141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.8"	""	"152.6"	""	"164.5"	""	"195.4"	""	"247.3"	"254.4"	""	"378"	"29"	"32.000"	"25.000"	"0.0263913620239572"	"19"	"0.0001991"	"0.003175"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATQFTGR"	"[K].sATQFTGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"B0BNM1"	"NAD(P)H-hydrate epimerase OS=Rattus norvegicus OX=10116 GN=Naxe PE=2 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"548.80090"	"1096.59453"	"1096.59484"	"-0.28"	"-0.00015"	"6/74"	"6"	"74"	"5269922.16412354"	"HCD"	"MS2"	"0"	"257.5"	"100.000"	"29.5519"	"7042"	"7042"	"7018"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"365.2"	""	"329.8"	""	"350.3"	""	"408.6"	"0.1"	"501.9"	"485.1"	""	"378"	"38"	"32.000"	"25.000"	"0.00275715895192041"	""	"0.0001991"	"0.002961"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"548.81384"	"1096.62041"	"1096.61999"	"0.38"	"0.00021"	"6/56"	"6"	"56"	"1972620.10565186"	"HCD"	"MS2"	"2.647222"	"117.5"	"100.000"	"50.9846"	"15721"	"15721"	"15701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.4"	""	"147.0"	""	"169.1"	""	"190.5"	"1.4"	"213.1"	"231.1"	""	"345"	"17"	"32.000"	"25.000"	"0.348168197735069"	"20"	"0.00511"	"0.06475"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"548.81396"	"1096.62065"	"1096.61999"	"0.60"	"0.00033"	"5/56"	"5"	"56"	"1960331.70587158"	"HCD"	"MS2"	"11.62959"	"111.3"	"100.000"	"50.6908"	"15635"	"15635"	"15619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.6"	""	"140.0"	""	"152.7"	""	"186.7"	""	"221.0"	"205.9"	""	"386"	"16"	"32.000"	"25.000"	"0.449321612729347"	"18"	"0.003255"	"0.0349"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"548.81403"	"1096.62078"	"1096.61999"	"0.72"	"0.00039"	"5/56"	"5"	"56"	"1851250.10797119"	"HCD"	"MS2"	"32.39693"	"118.1"	"100.000"	"50.3530"	"15498"	"15498"	"15476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.6"	""	"157.8"	""	"167.7"	""	"188.5"	""	"217.9"	"214.3"	""	"386"	"22"	"32.000"	"25.000"	"0.128397719146936"	"21"	"0.002189"	"0.02024"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEVSLR"	"[K].tYEVSLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"548.81409"	"1096.62090"	"1096.61999"	"0.83"	"0.00045"	"6/56"	"6"	"56"	"1811351.77667236"	"HCD"	"MS2"	"44.35291"	"114.9"	"100.000"	"50.6600"	"15589"	"15589"	"15558"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.7"	""	"158.0"	""	"154.0"	""	"172.4"	""	"205.2"	"216.9"	""	"386"	"23"	"32.000"	"25.000"	"0.0965066652505569"	"23"	"0.002525"	"0.02371"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVLTHGR"	"[K].qGVLTHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"366.21878"	"1096.64179"	"1096.64246"	"-0.61"	"-0.00022"	"8/70"	"8"	"70"	"17299673.6665039"	"HCD"	"MS2"	"18.95655"	"198.4"	"30.571"	"20.9783"	"3666"	"3666"	"3651"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"282.9"	""	"257.9"	""	"275.5"	""	"345.1"	"9.2"	"353.0"	"355.1"	""	"324"	"30"	"32.000"	"25.000"	"0.0180931846140451"	"17"	"0.0001991"	"0.005626"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVLTHGR"	"[K].qGVLTHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"366.21909"	"1096.64270"	"1096.64246"	"0.22"	"0.00008"	"11/70"	"11"	"70"	"16320204.2962646"	"HCD"	"MS2"	"17.46608"	"293.4"	"47.983"	"20.9499"	"3692"	"3692"	"3679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"411.9"	""	"388.6"	""	"412.8"	""	"488.0"	"20.9"	"544.4"	"513.3"	""	"295"	"24"	"31.000"	"24.000"	"0.0529409853601383"	"14"	"0.0001991"	"0.003335"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVLTHGR"	"[K].qGVLTHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.82855"	"1096.64983"	"1096.64246"	"6.72"	"0.00369"	"7/70"	"7"	"70"	"3345457.93206787"	"HCD"	"MS2"	"13.45939"	"225.1"	"100.000"	"20.8980"	"3634"	"3634"	"3620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.4"	""	"302.7"	""	"311.2"	""	"349.9"	"3.0"	"408.0"	"394.3"	""	"282"	"21"	"31.000"	"24.000"	"0.109703153696612"	"14"	"0.001453"	"0.01188"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVLTHGR"	"[K].qGVLTHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.82996"	"1096.65264"	"1096.64246"	"9.28"	"0.00509"	"7/70"	"7"	"70"	"3145114.91827393"	"HCD"	"MS2"	"28.27397"	"199.9"	"100.000"	"20.8720"	"3661"	"3661"	"3651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"310.8"	""	"263.8"	""	"286.0"	""	"314.3"	""	"347.2"	"372.2"	""	"284"	"21"	"31.000"	"24.000"	"0.114363738650267"	"14"	"0.001615"	"0.01382"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLDTHR"	"[K].nLLDTHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O70536"	"Sterol O-acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Soat1 PE=2 SV=1"	"O70536"	"Sterol O-acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Soat1 PE=2 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"366.54657"	"1097.62516"	"1097.62647"	"-1.20"	"-0.00044"	"5/62"	"5"	"62"	"1186005.11273193"	"HCD"	"MS2"	"34.84587"	"59.4"	"100.000"	"30.6014"	"7500"	"7500"	"7493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.9"	""	"78.0"	""	"73.9"	""	"107.4"	"0.0"	"110.5"	"115.2"	""	"377"	"22"	"32.000"	"25.000"	"0.126273248875015"	"22"	"0.001049"	"0.008538"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVTHIGR"	"[R].dAVTHIGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"366.54657"	"1097.62516"	"1097.62647"	"-1.20"	"-0.00044"	"7/62"	"7"	"62"	"5011302.04754639"	"HCD"	"MS2"	"37.64548"	"191.2"	"100.000"	"25.3807"	"5383"	"5383"	"5373"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.0"	""	"285.4"	""	"267.3"	""	"288.6"	"5.0"	"333.6"	"341.4"	""	"377"	"42"	"32.000"	"25.000"	"0.00117033812952367"	""	"0.0001991"	"0.004483"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLLDTHR"	"[K].nLLDTHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O70536"	"Sterol O-acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Soat1 PE=2 SV=1"	"O70536"	"Sterol O-acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Soat1 PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"366.54666"	"1097.62543"	"1097.62647"	"-0.95"	"-0.00035"	"6/62"	"6"	"62"	"1363737.76733398"	"HCD"	"MS2"	"56.47182"	"67.3"	"100.000"	"30.7075"	"7506"	"7506"	"7491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.0"	""	"93.2"	""	"90.6"	""	"109.5"	"1.4"	"131.1"	"125.4"	""	"377"	"18"	"32.000"	"25.000"	"0.314276099565875"	"19"	"0.009239"	"0.1185"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVTHIGR"	"[R].dAVTHIGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"366.54684"	"1097.62598"	"1097.62647"	"-0.45"	"-0.00016"	"9/62"	"9"	"62"	"5146230.91436768"	"HCD"	"MS2"	"47.16648"	"204.4"	"100.000"	"25.2357"	"5363"	"5363"	"5353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.4"	""	"275.5"	""	"296.7"	""	"311.0"	"0.5"	"346.9"	"402.4"	""	"356"	"22"	"32.000"	"25.000"	"0.116793857401917"	""	"0.002525"	"0.02504"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVTHIGR"	"[R].dAVTHIGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"P63074"	"Eukaryotic translation initiation factor 4E OS=Rattus norvegicus OX=10116 GN=Eif4e PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"549.31665"	"1097.62602"	"1097.62647"	"-0.41"	"-0.00022"	"11/62"	"11"	"62"	"1280016.14550781"	"HCD"	"MS2"	"37.43939"	"95.8"	"100.000"	"25.2589"	"5372"	"5372"	"5357"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.7"	""	"111.4"	""	"99.6"	""	"208.6"	""	"192.9"	"174.3"	""	"356"	"5"	"32.000"	"25.000"	"5.05149587062597"	"16"	"0.00856"	"0.1089"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGPPPK"	"[R].sGGPPPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"549.33795"	"1097.66863"	"1097.67192"	"-3.00"	"-0.00164"	"6/48"	"6"	"48"	"1107068.47979736"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"25.1257"	"5320"	"5320"	"5304"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.1"	""	"117.1"	""	"94.5"	""	"202.0"	""	"190.0"	"198.1"	""	"216"	"22"	"30.000"	"23.000"	"0.0647774362355951"	"16"	"0.00307"	"0.03291"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGPPPK"	"[R].sGGPPPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.33887"	"1097.67046"	"1097.67192"	"-1.33"	"-0.00073"	"6/48"	"6"	"48"	"2081965.8347168"	"HCD"	"MS2"	"19.62529"	"169.4"	"100.000"	"24.9520"	"5216"	"5216"	"5193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.6"	""	"150.3"	""	"125.0"	""	"448.1"	""	"377.3"	"350.2"	""	"216"	"24"	"30.000"	"23.000"	"0.0399414434162688"	"14"	"0.003904"	"0.04216"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGPPPK"	"[R].sGGPPPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"549.33936"	"1097.67143"	"1097.67192"	"-0.44"	"-0.00024"	"6/48"	"6"	"48"	"2102418.33410645"	"HCD"	"MS2"	"28.04979"	"163.4"	"100.000"	"24.7729"	"5180"	"5180"	"5160"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.3"	""	"153.7"	""	"140.3"	""	"410.9"	"1.4"	"349.8"	"318.9"	""	"217"	"22"	"30.000"	"23.000"	"0.0720161231386071"	"16"	"0.00394"	"0.04337"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGPPPK"	"[R].sGGPPPk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q4V898"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1"	"Q4V898; P84586; D4AE41"	"RNA-binding motif protein, X chromosome OS=Rattus norvegicus OX=10116 GN=Rbmx PE=1 SV=1; RNA-binding motif protein, X chromosome retrogene-like OS=Rattus norvegicus OX=10116 GN=Rbmxrtl PE=1 SV=1; RNA binding motif protein, X-linked-like-1 OS=Rattus norvegicus OX=10116 GN=Rbmxl1 PE=3 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"549.33948"	"1097.67168"	"1097.67192"	"-0.22"	"-0.00012"	"6/48"	"6"	"48"	"1085934.76116943"	"HCD"	"MS2"	"32.20397"	"97.7"	"100.000"	"25.2408"	"5329"	"5329"	"5313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.0"	""	"105.6"	""	"91.6"	""	"237.5"	""	"210.0"	"176.6"	""	"217"	"23"	"30.000"	"23.000"	"0.0610140337831529"	"17"	"0.002525"	"0.02372"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDVWS"	"[R].ySLDVWS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"549.78687"	"1098.56645"	"1098.56689"	"-0.40"	"-0.00022"	"5/60"	"5"	"60"	"3380735.23809814"	"HCD"	"MS2"	"41.68711"	"58.3"	"100.000"	"112.4604"	"40521"	"40521"	"40495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.0"	""	"73.5"	""	"83.3"	""	"97.6"	""	"111.5"	"122.7"	""	"333"	"31"	"32.000"	"25.000"	"0.0124857385853854"	"16"	"0.005712"	"0.07116"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDVWS"	"[R].ySLDVWS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"549.78735"	"1098.56743"	"1098.56689"	"0.49"	"0.00027"	"5/60"	"5"	"60"	"3549462.01837158"	"HCD"	"MS2"	"16.24"	"64.5"	"100.000"	"112.3889"	"40478"	"40478"	"40457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.7"	""	"90.3"	""	"93.8"	""	"108.6"	"0.9"	"120.9"	"119.6"	""	"340"	"34"	"32.000"	"25.000"	"0.00743787578769029"	"17"	"0.008217"	"0.1045"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYLEAR"	"[R].aFYLEAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIE1"	"Protein THEM6 OS=Rattus norvegicus OX=10116 GN=Them6 PE=2 SV=1"	"Q5XIE1"	"Protein THEM6 OS=Rattus norvegicus OX=10116 GN=Them6 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.81073"	"1098.61418"	"1098.61451"	"-0.30"	"-0.00016"	"4/48"	"4"	"48"	"468332.930297852"	"HCD"	"MS2"	"8.242499"	"30.8"	"100.000"	"67.6384"	"22480"	"22480"	"22453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"32.9"	""	"40.3"	""	"53.2"	"0.9"	"61.9"	"63.0"	""	"330"	"20"	"32.000"	"25.000"	"0.148417100952456"	"14"	"0.003401"	"0.03804"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPAGLENR"	"[R].iPAGLENR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P80254"	"D-dopachrome decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddt PE=1 SV=3"	"P80254"	"D-dopachrome decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddt PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"549.82660"	"1098.64592"	"1098.64687"	"-0.87"	"-0.00048"	"7/58"	"7"	"58"	"659369.999267578"	"HCD"	"MS2"	"8.146483"	"36.1"	"100.000"	"52.1456"	"16189"	"16189"	"16163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.9"	""	"29.2"	""	"42.3"	""	"70.8"	"0.1"	"71.1"	"91.6"	""	"282"	"16"	"31.000"	"24.000"	"0.329776050650969"	"23"	"0.009514"	"0.1277"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLLGNPK"	"[K].LDLLGNPk.[E]"	"K8(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"549.83942"	"1098.67156"	"1098.67203"	"-0.43"	"-0.00023"	"6/60"	"6"	"60"	"813266.599975586"	"HCD"	"MS2"	"26.1718"	"35.9"	"100.000"	"69.4160"	"23235"	"23235"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"40.4"	""	"57.5"	""	"61.7"	"0.5"	"67.6"	"70.9"	""	"237"	"30"	"30.000"	"23.000"	"0.0107082462636093"	""	"0.003704"	"0.04012"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVSQVPR"	"[R].lAVSQVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"549.84485"	"1098.68242"	"1098.68326"	"-0.76"	"-0.00042"	"6/62"	"6"	"62"	"5946197.26287842"	"HCD"	"MS2"	"2.222297"	"240.4"	"100.000"	"48.7800"	"14823"	"14823"	"14803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"375.8"	""	"313.9"	""	"342.3"	""	"383.5"	""	"403.5"	"460.8"	""	"222"	"38"	"30.000"	"23.000"	"0.00191568006010913"	"23"	"0.0001991"	"0.002434"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVSQVPR"	"[R].lAVSQVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"549.84485"	"1098.68242"	"1098.68326"	"-0.76"	"-0.00042"	"6/62"	"6"	"62"	"6452734.47198486"	"HCD"	"MS2"	"6.119601"	"251.9"	"100.000"	"48.4794"	"14737"	"14737"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"385.1"	""	"317.8"	""	"354.8"	""	"411.2"	""	"432.9"	"484.7"	""	"222"	"38"	"30.000"	"23.000"	"0.00192895891991181"	"23"	"0.0001991"	"0.002805"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVSQVPR"	"[R].lAVSQVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"549.84503"	"1098.68279"	"1098.68326"	"-0.43"	"-0.00024"	"6/62"	"6"	"62"	"3576143.10791016"	"HCD"	"MS2"	"18.10294"	"161.9"	"100.000"	"49.1102"	"14957"	"14957"	"14937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.5"	""	"198.2"	""	"223.6"	""	"257.4"	""	"288.1"	"309.7"	""	"222"	"25"	"30.000"	"23.000"	"0.0346196743834427"	"21"	"0.0001991"	"0.00333"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAVSQVPR"	"[R].lAVSQVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"549.84503"	"1098.68279"	"1098.68326"	"-0.43"	"-0.00024"	"6/62"	"6"	"62"	"4593542.60028076"	"HCD"	"MS2"	"22.20881"	"186.4"	"100.000"	"48.7663"	"14852"	"14852"	"14840"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"291.5"	""	"228.1"	""	"263.0"	""	"298.8"	"1.9"	"334.8"	"346.7"	""	"222"	"27"	"30.000"	"23.000"	"0.0211019689071486"	"17"	"0.0001991"	"0.004835"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0976"	"0.0000"	"1"	"1"	"1"	"550.26215"	"1099.51702"	"1099.51789"	"-0.80"	"-0.00044"	"5/58"	"5"	"58"	"1140290.19567871"	"HCD"	"MS2"	"8.021616"	"23.8"	"100.000"	"108.2529"	"38869"	"38869"	"38859"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"21.4"	""	"33.1"	""	"34.7"	"1.0"	"56.7"	"58.0"	""	"190"	"41"	"29.000"	"22.000"	"0.000686631313422062"	""	"0.001217"	"0.009498"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1778"	"0.0000"	"1"	"1"	"1"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"5/58"	"5"	"58"	"1322765.59375"	"HCD"	"MS2"	"4.545277"	"27.3"	"100.000"	"107.9780"	"38746"	"38746"	"38741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"26.3"	""	"24.0"	""	"52.2"	""	"62.7"	"67.5"	""	"188"	"45"	"29.000"	"22.000"	"0.000270475450985153"	""	"0.0007633"	"0.007365"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"550.26239"	"1099.51750"	"1099.51789"	"-0.35"	"-0.00019"	"4/58"	"4"	"58"	"778425.502258301"	"HCD"	"MS2"	"33.988"	"21.8"	"100.000"	"107.9714"	"38764"	"38764"	"38754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"26.4"	""	"27.4"	""	"39.7"	""	"48.8"	"46.3"	""	"188"	"23"	"29.000"	"22.000"	"0.049673853666867"	""	"0.004213"	"0.04762"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"550.26251"	"1099.51775"	"1099.51789"	"-0.13"	"-0.00007"	"6/56"	"6"	"56"	"419030.415405273"	"HCD"	"MS2"	"52.85941"	"19.8"	"100.000"	"85.7983"	"29866"	"29866"	"29846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	""	"24.2"	""	"33.0"	""	"35.1"	""	"32.0"	"37.8"	""	"187"	"22"	"29.000"	"22.000"	"0.054677872867509"	""	"0.001488"	"0.01198"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"550.26251"	"1099.51775"	"1099.51789"	"-0.13"	"-0.00007"	"5/58"	"5"	"58"	"755916.761230469"	"HCD"	"MS2"	"32.70918"	"22.1"	"100.000"	"107.7242"	"38650"	"38650"	"38638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.2"	""	"22.8"	""	"31.8"	""	"33.5"	""	"53.5"	"46.0"	""	"187"	"21"	"29.000"	"22.000"	"0.0727464175222217"	""	"0.002711"	"0.02846"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IDEFEAM"	"[R].iDEFEAm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"550.26263"	"1099.51799"	"1099.51789"	"0.09"	"0.00005"	"4/56"	"4"	"56"	"225272.657775879"	"HCD"	"MS2"	"35.5909"	"8.8"	"100.000"	"108.2630"	"38851"	"38851"	"38843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"9.7"	""	"12.9"	""	"13.6"	""	"17.4"	"18.9"	""	"187"	"18"	"29.000"	"22.000"	"0.158420584341825"	"14"	"0.004213"	"0.0467"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"550.26263"	"1099.51799"	"1099.51789"	"0.09"	"0.00005"	"4/58"	"4"	"58"	"225272.657775879"	"HCD"	"MS2"	"35.5909"	"8.8"	"100.000"	"108.2630"	"38851"	"38851"	"38843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"9.7"	""	"12.9"	""	"13.6"	""	"17.4"	"18.9"	""	"187"	"18"	"29.000"	"22.000"	"0.158420584341825"	"14"	"0.002419"	"0.02265"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESM.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0667"	"0.0000"	"1"	"1"	"1"	"550.26300"	"1099.51872"	"1099.51789"	"0.76"	"0.00042"	"5/58"	"5"	"58"	"196053.928161621"	"HCD"	"MS2"	"20.74256"	"7.4"	"100.000"	"108.5217"	"38965"	"38965"	"38955"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.3"	""	"7.8"	""	"10.9"	""	"12.3"	""	"15.9"	"15.6"	""	"184"	"15"	"29.000"	"22.000"	"0.314621087112612"	"13"	"0.002588"	"0.0269"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSSSFSR"	"[R].iSSSSFSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.30060"	"1099.59392"	"1099.59450"	"-0.53"	"-0.00029"	"7/66"	"7"	"66"	"3451084.47137451"	"HCD"	"MS2"	"0"	"205.1"	"100.000"	"39.7268"	"11151"	"11151"	"11136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.0"	""	"239.9"	""	"258.8"	""	"447.8"	"0.5"	"412.8"	"391.4"	""	"349"	"17"	"32.000"	"25.000"	"0.316807483153913"	"14"	"0.0009352"	"0.008372"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSSSFSR"	"[R].iSSSSFSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.30066"	"1099.59404"	"1099.59450"	"-0.42"	"-0.00023"	"7/66"	"7"	"66"	"3636811.78222656"	"HCD"	"MS2"	"14.90894"	"218.3"	"100.000"	"39.6219"	"11143"	"11143"	"11128"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"221.5"	""	"264.4"	""	"271.8"	""	"482.2"	""	"427.2"	"405.0"	""	"349"	"20"	"32.000"	"25.000"	"0.172900174383788"	"14"	"0.0009352"	"0.008183"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FANYIDK"	"[R].FANYIDk.[V]"	"K7(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"550.30121"	"1099.59514"	"1099.59853"	"-3.08"	"-0.00169"	"5/56"	"5"	"56"	"428103.271606445"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"51.6217"	"15977"	"15977"	"15954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.7"	""	"42.9"	""	"42.2"	""	"44.3"	"0.6"	"58.2"	"73.0"	""	"359"	"31"	"32.000"	"25.000"	"0.0158148272704938"	"22"	"0.008868"	"0.1127"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGPQTAR"	"[K].lQGPQTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"550.32422"	"1099.64116"	"1099.64212"	"-0.87"	"-0.00048"	"7/68"	"7"	"68"	"2262038.74719238"	"HCD"	"MS2"	"33.23861"	"120.7"	"100.000"	"27.5266"	"6264"	"6264"	"6245"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"270.5"	""	"122.7"	""	"128.6"	""	"186.1"	"0.7"	"228.5"	"205.0"	""	"401"	"27"	"33.000"	"26.000"	"0.036653409333662"	"22"	"0.001488"	"0.01212"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSIVPR"	"[K].gELSIVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"550.33673"	"1099.66619"	"1099.66727"	"-0.99"	"-0.00054"	"7/60"	"7"	"60"	"1278848.23602295"	"HCD"	"MS2"	"41.32764"	"53.2"	"100.000"	"62.2888"	"20342"	"20342"	"20313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.8"	""	"80.8"	""	"74.3"	""	"73.0"	"0.5"	"100.7"	"101.3"	""	"336"	"19"	"32.000"	"25.000"	"0.231371190774183"	"18"	"0.001348"	"0.01091"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSIVPR"	"[K].gELSIVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"550.33698"	"1099.66667"	"1099.66727"	"-0.55"	"-0.00030"	"5/60"	"5"	"60"	"1300026.59667969"	"HCD"	"MS2"	"15.57022"	"60.7"	"100.000"	"62.6183"	"20476"	"20476"	"20452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.9"	""	"90.1"	""	"81.4"	""	"95.4"	"0.4"	"111.2"	"109.5"	""	"334"	"20"	"32.000"	"25.000"	"0.150909462111624"	"16"	"0.0004582"	"0.006426"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPEAVR"	"[R].vLSPEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"550.33704"	"1099.66680"	"1099.66727"	"-0.44"	"-0.00024"	"5/60"	"5"	"60"	"2629283.25366211"	"HCD"	"MS2"	"54.12578"	"148.0"	"100.000"	"48.2295"	"14637"	"14637"	"14617"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.0"	"3.1"	"158.4"	""	"182.3"	""	"234.2"	"2.9"	"301.5"	"348.5"	""	"334"	"26"	"32.000"	"25.000"	"0.0452602002525771"	""	"0.003818"	"0.04167"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPEAVR"	"[R].vLSPEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"550.33710"	"1099.66692"	"1099.66727"	"-0.32"	"-0.00018"	"5/60"	"5"	"60"	"2200998.52288818"	"HCD"	"MS2"	"39.15701"	"122.2"	"100.000"	"48.1827"	"14580"	"14580"	"14557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.9"	""	"157.0"	""	"153.6"	""	"219.3"	""	"222.5"	"230.8"	""	"334"	"30"	"32.000"	"25.000"	"0.0180599469866756"	""	"0.00455"	"0.05367"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPEAVR"	"[R].vLSPEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"550.33710"	"1099.66692"	"1099.66727"	"-0.32"	"-0.00018"	"5/60"	"5"	"60"	"2844842.57849121"	"HCD"	"MS2"	"41.15482"	"163.4"	"100.000"	"47.9153"	"14509"	"14509"	"14490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.8"	""	"203.1"	""	"216.4"	""	"259.7"	"2.5"	"318.1"	"331.2"	""	"334"	"25"	"32.000"	"25.000"	"0.0473932477749741"	"25"	"0.004713"	"0.0557"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSIVPR"	"[K].gELSIVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"550.33746"	"1099.66765"	"1099.66727"	"0.34"	"0.00019"	"5/60"	"5"	"60"	"1493651.5435791"	"HCD"	"MS2"	"10.528"	"67.8"	"100.000"	"62.6360"	"20450"	"20450"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.2"	""	"88.9"	""	"103.7"	""	"113.3"	""	"129.2"	"114.7"	""	"334"	"21"	"32.000"	"25.000"	"0.142140052379797"	"17"	"0.0005161"	"0.006841"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSIVPR"	"[K].gELSIVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"550.33752"	"1099.66777"	"1099.66727"	"0.45"	"0.00025"	"5/60"	"5"	"60"	"1253971.01239014"	"HCD"	"MS2"	"47.68737"	"56.5"	"100.000"	"62.3364"	"20328"	"20328"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.0"	""	"79.1"	""	"81.2"	""	"96.1"	""	"99.6"	"102.6"	""	"364"	"17"	"32.000"	"25.000"	"0.33656688865401"	"17"	"0.0009352"	"0.008359"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVPATDR"	"[R].vLVPATDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"550.33752"	"1099.66777"	"1099.66727"	"0.45"	"0.00025"	"4/58"	"4"	"58"	"4224972.63183594"	"HCD"	"MS2"	"11.33083"	"179.9"	"100.000"	"47.0553"	"14121"	"14121"	"14100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.3"	""	"217.3"	""	"216.4"	""	"306.8"	""	"377.4"	"350.9"	""	"364"	"25"	"32.000"	"25.000"	"0.0532195732767487"	""	"0.0001991"	"0.001979"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPEAVR"	"[R].vLSPEAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"550.33789"	"1099.66850"	"1099.66727"	"1.12"	"0.00061"	"5/60"	"5"	"60"	"3122385.21417236"	"HCD"	"MS2"	"52.39284"	"182.9"	"100.000"	"48.4993"	"14709"	"14709"	"14694"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.7"	""	"190.8"	""	"218.4"	""	"292.8"	""	"387.5"	"428.3"	""	"343"	"25"	"32.000"	"25.000"	"0.0525126728877951"	""	"0.009411"	"0.1247"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVPATDR"	"[R].vLVPATDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"550.33801"	"1099.66875"	"1099.66727"	"1.34"	"0.00074"	"7/58"	"7"	"58"	"2566333.48284912"	"HCD"	"MS2"	"0"	"120.2"	"100.000"	"46.4762"	"13924"	"13924"	"13902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.5"	""	"147.3"	""	"148.0"	""	"208.7"	""	"232.1"	"232.6"	""	"343"	"29"	"32.000"	"25.000"	"0.0196455469457909"	""	"0.0001991"	"0.002138"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVPATDR"	"[R].vLVPATDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"550.33820"	"1099.66911"	"1099.66727"	"1.67"	"0.00092"	"4/58"	"4"	"58"	"2074068.81536865"	"HCD"	"MS2"	"0"	"98.2"	"100.000"	"46.7504"	"13998"	"13998"	"13981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.2"	""	"131.3"	""	"128.9"	""	"167.9"	""	"188.0"	"186.7"	""	"311"	"28"	"31.000"	"24.000"	"0.025925694155169"	""	"0.0001686"	"0.001258"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQEVR"	"[R].lLLQEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"550.35516"	"1099.70305"	"1099.70366"	"-0.55"	"-0.00030"	"5/54"	"5"	"54"	"609549.720703125"	"HCD"	"MS2"	"44.73016"	"32.4"	"100.000"	"80.7434"	"27824"	"27824"	"27795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.5"	""	"51.7"	""	"53.7"	""	"52.2"	"0.2"	"56.2"	"47.0"	""	"213"	"21"	"30.000"	"23.000"	"0.0782257269587327"	""	"0.002419"	"0.02282"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIDSFR"	"[K].aYIDSFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"550.79950"	"1100.59172"	"1100.59378"	"-1.87"	"-0.00103"	"6/50"	"6"	"50"	"1203012.36358643"	"HCD"	"MS2"	"0"	"58.8"	"100.000"	"64.1201"	"21085"	"21085"	"21072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.0"	""	"76.6"	""	"75.2"	""	"101.3"	"0.8"	"112.8"	"108.3"	""	"388"	"16"	"32.000"	"25.000"	"0.545508761097394"	"17"	"0.004213"	"0.04709"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIDSFR"	"[K].aYIDSFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"550.79987"	"1100.59245"	"1100.59378"	"-1.20"	"-0.00066"	"9/50"	"9"	"50"	"3134704.53118896"	"HCD"	"MS2"	"0"	"145.5"	"100.000"	"63.9243"	"20974"	"20974"	"20958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.9"	""	"189.8"	""	"195.2"	""	"243.8"	""	"274.3"	"276.4"	""	"386"	"30"	"32.000"	"25.000"	"0.0188606783644472"	"20"	"0.001999"	"0.01753"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIDSFR"	"[K].aYIDSFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"550.79993"	"1100.59258"	"1100.59378"	"-1.09"	"-0.00060"	"6/50"	"6"	"50"	"979045.567504883"	"HCD"	"MS2"	"18.45447"	"54.0"	"100.000"	"63.5420"	"20851"	"20851"	"20825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.6"	""	"71.6"	""	"80.8"	""	"73.8"	""	"111.0"	"105.9"	""	"386"	"21"	"32.000"	"25.000"	"0.145732799939429"	"17"	"0.002588"	"0.02703"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIDSFR"	"[K].aYIDSFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"550.79993"	"1100.59258"	"1100.59378"	"-1.09"	"-0.00060"	"6/50"	"6"	"50"	"1368984.56262207"	"HCD"	"MS2"	"12.8634"	"72.1"	"100.000"	"63.6377"	"20858"	"20858"	"20834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.6"	""	"92.4"	""	"94.1"	""	"119.1"	""	"141.3"	"137.3"	""	"386"	"25"	"32.000"	"25.000"	"0.061738675617044"	"19"	"0.001615"	"0.01455"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYIDSFR"	"[K].aYIDSFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"550.79999"	"1100.59270"	"1100.59378"	"-0.98"	"-0.00054"	"6/50"	"6"	"50"	"3313031.14654541"	"HCD"	"MS2"	"0"	"158.1"	"100.000"	"63.8291"	"20968"	"20968"	"20958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.4"	""	"207.5"	""	"228.6"	""	"239.5"	""	"289.9"	"306.8"	""	"386"	"33"	"32.000"	"25.000"	"0.00973996304297611"	"19"	"0.00212"	"0.01928"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"550.79999"	"1100.59270"	"1100.59378"	"-0.98"	"-0.00054"	"5/50"	"5"	"50"	"7598808.04876709"	"HCD"	"MS2"	"0.9112412"	"353.8"	"100.000"	"50.0860"	"15389"	"15389"	"15371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"412.1"	""	"504.5"	""	"640.4"	""	"663.4"	"1.8"	"508.8"	"613.4"	""	"386"	"26"	"32.000"	"25.000"	"0.0518271478012092"	"18"	"0.003043"	"0.03287"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"550.80005"	"1100.59282"	"1100.59378"	"-0.87"	"-0.00048"	"5/50"	"5"	"50"	"4009704.82299805"	"HCD"	"MS2"	"11.44894"	"194.7"	"100.000"	"50.1628"	"15385"	"15385"	"15369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.2"	""	"278.3"	""	"335.1"	""	"353.8"	""	"287.4"	"352.3"	""	"385"	"23"	"32.000"	"25.000"	"0.104575688812293"	"17"	"0.002834"	"0.03018"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"550.80035"	"1100.59343"	"1100.59378"	"-0.31"	"-0.00017"	"5/50"	"5"	"50"	"6240215.35888672"	"HCD"	"MS2"	"0"	"302.3"	"100.000"	"50.4737"	"15512"	"15512"	"15494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"354.4"	""	"425.7"	""	"543.4"	""	"577.3"	""	"427.0"	"532.5"	""	"398"	"25"	"32.000"	"25.000"	"0.0640992689465404"	"18"	"0.004114"	"0.04492"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTEGVYR"	"[K].fTEGVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.80042"	"1100.59355"	"1100.59378"	"-0.20"	"-0.00011"	"5/50"	"5"	"50"	"2633428.10577393"	"HCD"	"MS2"	"20.42656"	"132.5"	"100.000"	"49.7935"	"15270"	"15270"	"15244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.9"	""	"191.3"	""	"228.2"	""	"229.1"	"1.7"	"215.2"	"228.8"	""	"398"	"23"	"32.000"	"25.000"	"0.111391762697527"	"14"	"0.002166"	"0.01991"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQAAGK"	"[K].aPQAAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"550.84460"	"1100.68193"	"1100.68281"	"-0.80"	"-0.00044"	"6/58"	"6"	"58"	"2348198.34887695"	"HCD"	"MS2"	"0"	"159.6"	"100.000"	"26.8634"	"5966"	"5966"	"5962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"243.0"	""	"218.2"	""	"232.1"	""	"260.6"	""	"310.8"	"256.2"	""	"472"	"26"	"33.000"	"26.000"	"0.0601051939610069"	"17"	"0.001615"	"0.01455"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQAAGK"	"[K].aPQAAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"550.84479"	"1100.68230"	"1100.68281"	"-0.47"	"-0.00026"	"6/58"	"6"	"58"	"3942062.45739746"	"HCD"	"MS2"	"24.46689"	"254.3"	"100.000"	"26.9108"	"5983"	"5983"	"5977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"382.8"	""	"355.2"	""	"356.9"	""	"404.7"	""	"464.7"	"446.4"	""	"472"	"23"	"33.000"	"26.000"	"0.125577549186963"	"16"	"0.002189"	"0.02063"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQAAGK"	"[K].aPQAAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"550.84497"	"1100.68266"	"1100.68281"	"-0.14"	"-0.00007"	"6/58"	"6"	"58"	"1750700.86578369"	"HCD"	"MS2"	"100"	"125.6"	"100.000"	"26.6631"	"5926"	"5926"	"5913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.4"	""	"168.6"	""	"178.5"	""	"206.8"	""	"237.6"	"217.3"	""	"472"	"29"	"33.000"	"26.000"	"0.0311825769668032"	"20"	"0.0007633"	"0.007248"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQEVR"	"[R].lLLqEVR.[L]"	"N-Term(TMT6plex); Q4(Deamidated)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"550.84717"	"1100.68706"	"1100.68768"	"-0.56"	"-0.00031"	"5/54"	"5"	"54"	"308225.783935547"	"HCD"	"MS2"	"18.72897"	"18.6"	"100.000"	"88.7486"	"31017"	"31017"	"30994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"32.5"	""	"30.1"	""	"30.4"	""	"30.9"	"24.8"	""	"400"	"24"	"33.000"	"26.000"	"0.0805434068650919"	"22"	"0.001488"	"0.01268"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLQEVR"	"[R].lLLqEVR.[L]"	"N-Term(TMT6plex); Q4(Deamidated)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"550.84772"	"1100.68816"	"1100.68768"	"0.44"	"0.00024"	"5/54"	"5"	"54"	"259331.287414551"	"HCD"	"MS2"	"23.33321"	"15.2"	"100.000"	"88.5997"	"30996"	"30996"	"30978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.6"	""	"28.5"	""	"23.6"	""	"20.2"	""	"21.7"	"21.6"	""	"492"	"22"	"33.000"	"26.000"	"0.167084093623828"	"23"	"0.001615"	"0.01383"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSSSSYR"	"[R].sVSSSSYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"551.29004"	"1101.57280"	"1101.57377"	"-0.88"	"-0.00048"	"6/66"	"6"	"66"	"571974.92791748"	"HCD"	"MS2"	"19.6452"	"43.4"	"100.000"	"23.7924"	"4780"	"4780"	"4756"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"51.2"	""	"42.5"	""	"71.8"	"1.2"	"111.4"	"86.8"	""	"389"	"13"	"32.000"	"25.000"	"1.05419173183116"	"15"	"0.001615"	"0.01363"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].yNGLIHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.88333"	"1101.63544"	"1101.63664"	"-1.09"	"-0.00040"	"7/60"	"7"	"60"	"1680174.43267822"	"HCD"	"MS2"	"68.14865"	"93.0"	"100.000"	"34.8602"	"9181"	"9181"	"9163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.9"	""	"128.0"	""	"138.6"	""	"157.3"	""	"181.7"	"159.1"	""	"537"	"14"	"34.000"	"27.000"	"1.1965870269473"	"13"	"0.002834"	"0.03022"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].yNGLIHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"367.88370"	"1101.63654"	"1101.63664"	"-0.09"	"-0.00003"	"6/60"	"6"	"60"	"1762948.02868652"	"HCD"	"MS2"	"69.7917"	"95.2"	"100.000"	"34.8118"	"9198"	"9198"	"9179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.6"	""	"126.3"	""	"147.9"	""	"154.2"	""	"178.7"	"172.4"	""	"623"	"17"	"34.000"	"27.000"	"0.617245668538288"	"14"	"0.001615"	"0.01433"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVVSQNR"	"[K].vAVVSQNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"551.33435"	"1101.66142"	"1101.65777"	"3.31"	"0.00183"	"6/60"	"6"	"60"	"1667629.6282959"	"HCD"	"MS2"	"28.95548"	"84.9"	"100.000"	"30.5815"	"7457"	"7457"	"7436"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.4"	""	"110.1"	""	"110.3"	""	"141.0"	""	"159.7"	"156.5"	""	"693"	"35"	"35.000"	"28.000"	"0.0119042828947307"	"23"	"0.0001991"	"0.004479"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].ynGLIHR.[K]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.21109"	"1102.61872"	"1102.62066"	"-1.76"	"-0.00065"	"7/60"	"7"	"60"	"2629634.58630371"	"HCD"	"MS2"	"0"	"89.5"	"100.000"	"40.2948"	"11416"	"11416"	"11386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.2"	""	"122.3"	""	"153.3"	""	"144.5"	"0.4"	"166.7"	"136.6"	""	"613"	"26"	"34.000"	"27.000"	"0.0782402949265672"	"14"	"0.003357"	"0.03734"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].ynGLIHR.[K]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.21121"	"1102.61908"	"1102.62066"	"-1.43"	"-0.00053"	"7/60"	"7"	"60"	"2554656.59735107"	"HCD"	"MS2"	"0"	"92.0"	"100.000"	"40.4067"	"11427"	"11427"	"11405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.7"	""	"140.2"	""	"135.2"	""	"152.9"	""	"175.4"	"136.8"	""	"615"	"21"	"34.000"	"27.000"	"0.245383366334903"	"14"	"0.002035"	"0.01828"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].ynGLIHR.[K]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.21130"	"1102.61936"	"1102.62066"	"-1.18"	"-0.00043"	"7/60"	"7"	"60"	"1226668.05108643"	"HCD"	"MS2"	"5.550852"	"56.1"	"100.000"	"40.7307"	"11558"	"11558"	"11534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.1"	""	"76.8"	""	"84.5"	""	"97.9"	""	"101.4"	"94.8"	""	"614"	"24"	"34.000"	"27.000"	"0.119988155008267"	"14"	"0.0001991"	"0.004937"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGLIHR"	"[R].ynGLIHR.[K]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"368.21133"	"1102.61945"	"1102.62066"	"-1.10"	"-0.00040"	"7/60"	"7"	"60"	"723279.572265625"	"HCD"	"MS2"	"10.43482"	"45.0"	"100.000"	"40.6857"	"11575"	"11575"	"11547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.5"	""	"66.1"	""	"61.0"	""	"73.3"	"0.4"	"82.5"	"83.3"	""	"614"	"25"	"34.000"	"27.000"	"0.104264958685255"	"14"	"0.001999"	"0.01743"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDINLER"	"[R].lDInLER.[S]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q4V897"	"Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ccdc90b PE=2 SV=1"	"Q4V897"	"Coiled-coil domain-containing protein 90B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ccdc90b PE=2 SV=1"	"0"	"2"	"2"	"0.0556"	"0.0000"	"1"	"1"	"3"	"551.81873"	"1102.63017"	"1102.63056"	"-0.35"	"-0.00019"	"6/62"	"6"	"62"	"1637674.29626465"	"HCD"	"MS2"	"2.495909"	"74.6"	"100.000"	"94.2047"	"33252"	"33252"	"33232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.8"	""	"94.6"	""	"103.1"	""	"119.6"	""	"141.7"	"122.5"	""	"732"	"18"	"35.000"	"28.000"	"0.557803307889808"	"27"	"0.009382"	"0.1221"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDWDGIR"	"[K].lDWDGIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C1Q3"	"Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Lpcat2 PE=3 SV=1"	"P0C1Q3"	"Lysophosphatidylcholine acyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Lpcat2 PE=3 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"3"	"552.30615"	"1103.60503"	"1103.60467"	"0.32"	"0.00018"	"6/52"	"6"	"52"	"459342.471130371"	"HCD"	"MS2"	"20.1698"	"25.2"	"100.000"	"91.3577"	"32104"	"32104"	"32084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"27.5"	""	"30.9"	""	"47.4"	""	"53.0"	"57.3"	""	"861"	"16"	"36.000"	"29.000"	"1.01852842976762"	"25"	"0.002525"	"0.02454"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEASIAR"	"[R].dLEASIAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3778"	"0.0000"	"1"	"1"	"1"	"552.31616"	"1103.62505"	"1103.62580"	"-0.69"	"-0.00038"	"6/64"	"6"	"64"	"2250847.706604"	"HCD"	"MS2"	"13.25425"	"106.7"	"100.000"	"48.7521"	"14812"	"14812"	"14787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.1"	""	"132.9"	""	"137.9"	""	"183.2"	""	"218.2"	"209.7"	""	"832"	"45"	"36.000"	"29.000"	"0.00128260618730373"	""	"0.0001686"	"0.0013"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEVDSGR"	"[R].lVEVDSGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"552.31622"	"1103.62517"	"1103.62580"	"-0.57"	"-0.00032"	"6/62"	"6"	"62"	"1815491.60174561"	"HCD"	"MS2"	"8.52413"	"106.7"	"100.000"	"44.3245"	"13018"	"13018"	"12993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.3"	""	"99.5"	""	"75.7"	""	"220.4"	"3.1"	"243.4"	"280.7"	""	"832"	"43"	"36.000"	"29.000"	"0.00231789271555683"	"20"	"0.0001686"	"0.001538"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEVDSGR"	"[R].lVEVDSGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"552.31622"	"1103.62517"	"1103.62580"	"-0.57"	"-0.00032"	"6/62"	"6"	"62"	"2062391.65637207"	"HCD"	"MS2"	"20.59955"	"121.4"	"100.000"	"44.0979"	"12961"	"12961"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.9"	""	"111.1"	""	"90.1"	""	"239.1"	"7.7"	"295.7"	"299.8"	""	"832"	"42"	"36.000"	"29.000"	"0.00247225537984078"	"21"	"0.0001686"	"0.001341"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAETDLLR"	"[R].gAETDLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"552.31659"	"1103.62590"	"1103.62580"	"0.09"	"0.00005"	"6/60"	"6"	"60"	"2963197.6529541"	"HCD"	"MS2"	"0"	"140.4"	"100.000"	"50.6864"	"15634"	"15634"	"15619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.8"	""	"150.1"	""	"130.7"	""	"323.6"	""	"351.3"	"262.7"	""	"832"	"23"	"36.000"	"29.000"	"0.200490283812053"	"29"	"0.009713"	"0.129"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEASIAR"	"[R].dLEASIAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.2340"	"0.0000"	"1"	"1"	"1"	"552.31665"	"1103.62602"	"1103.62580"	"0.20"	"0.00011"	"11/64"	"11"	"64"	"2021786.26745605"	"HCD"	"MS2"	"37.52641"	"101.5"	"100.000"	"48.4104"	"14709"	"14709"	"14686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.0"	""	"119.7"	""	"131.9"	""	"181.2"	"0.3"	"202.2"	"186.4"	""	"832"	"47"	"36.000"	"29.000"	"0.000807408525078596"	""	"0"	"0.0002226"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAETDLLR"	"[R].gAETDLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"552.31689"	"1103.62651"	"1103.62580"	"0.64"	"0.00035"	"6/60"	"6"	"60"	"2546148.21594238"	"HCD"	"MS2"	"2.337217"	"121.8"	"100.000"	"51.0165"	"15734"	"15734"	"15717"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.0"	""	"129.0"	""	"112.1"	""	"295.3"	""	"303.2"	"217.4"	""	"885"	"23"	"36.000"	"29.000"	"0.240388271685402"	"29"	"0.001999"	"0.0175"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"552.32379"	"1103.64031"	"1103.64106"	"-0.68"	"-0.00038"	"6/56"	"6"	"56"	"2695592.31091309"	"HCD"	"MS2"	"43.66551"	"141.9"	"100.000"	"52.4938"	"16365"	"16365"	"16342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.4"	""	"174.8"	""	"208.1"	""	"222.7"	"5.6"	"234.4"	"275.4"	""	"1056"	"37"	"37.000"	"30.000"	"0.00985448476760706"	"23"	"0.0001991"	"0.002759"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"552.32404"	"1103.64079"	"1103.64106"	"-0.24"	"-0.00013"	"6/56"	"6"	"56"	"12587939.0454102"	"HCD"	"MS2"	"2.728989"	"492.8"	"100.000"	"52.7861"	"16484"	"16484"	"16466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"737.3"	""	"653.2"	""	"721.3"	""	"772.9"	"14.1"	"808.0"	"958.2"	""	"1056"	"38"	"37.000"	"30.000"	"0.00779173049569672"	"25"	"0.0001991"	"0.004566"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"552.32416"	"1103.64104"	"1103.64106"	"-0.02"	"-0.00001"	"5/56"	"5"	"56"	"11888595.8181152"	"HCD"	"MS2"	"3.041013"	"476.6"	"100.000"	"53.1198"	"16587"	"16587"	"16570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"733.9"	""	"650.5"	""	"710.9"	""	"721.1"	"10.9"	"765.0"	"918.0"	""	"1058"	"32"	"37.000"	"30.000"	"0.0349506833996018"	"21"	"0.001348"	"0.01108"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGVFVPR"	"[K].eAGVFVPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"552.32422"	"1103.64116"	"1103.64106"	"0.09"	"0.00005"	"6/56"	"6"	"56"	"2843220.3918457"	"HCD"	"MS2"	"32.54278"	"145.2"	"100.000"	"52.7998"	"16456"	"16456"	"16432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.3"	""	"204.6"	""	"207.4"	""	"220.4"	""	"259.1"	"275.4"	""	"1058"	"38"	"37.000"	"30.000"	"0.00925668898282443"	"21"	"0.0001991"	"0.003745"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPFQR"	"[K].lDVPFQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q0VGK4"	"Lysophospholipase D GDPD1 OS=Rattus norvegicus OX=10116 GN=Gdpd1 PE=2 SV=1"	"Q0VGK4"	"Lysophospholipase D GDPD1 OS=Rattus norvegicus OX=10116 GN=Gdpd1 PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"552.32501"	"1103.64275"	"1103.64106"	"1.53"	"0.00084"	"6/50"	"6"	"50"	"502754.675354004"	"HCD"	"MS2"	"10.78002"	"25.2"	"100.000"	"78.7871"	"27028"	"27028"	"26999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"31.6"	""	"31.9"	""	"43.1"	""	"42.2"	"52.8"	""	"1045"	"20"	"37.000"	"30.000"	"0.493271807859395"	"29"	"0.005589"	"0.07043"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILIDTSR"	"[R].gILIDTSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"552.33331"	"1103.65935"	"1103.66219"	"-2.57"	"-0.00142"	"6/60"	"6"	"60"	"2453386.7277832"	"HCD"	"MS2"	"9.561163"	"116.5"	"100.000"	"57.6289"	"18415"	"18415"	"18391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.8"	""	"155.6"	""	"157.0"	""	"180.1"	""	"246.9"	"207.7"	""	"767"	"33"	"35.000"	"28.000"	"0.0182291059149066"	""	"0.0001991"	"0.003209"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLDTSR"	"[R].gILLDTSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"552.33331"	"1103.65935"	"1103.66219"	"-2.57"	"-0.00142"	"6/60"	"6"	"60"	"2453386.7277832"	"HCD"	"MS2"	"9.561163"	"116.5"	"100.000"	"57.6289"	"18415"	"18415"	"18391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.8"	""	"155.6"	""	"157.0"	""	"180.1"	""	"246.9"	"207.7"	""	"767"	"33"	"35.000"	"28.000"	"0.0182291059149066"	""	"0.0001991"	"0.003209"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILIDTSR"	"[R].gILIDTSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"552.33337"	"1103.65947"	"1103.66219"	"-2.46"	"-0.00136"	"6/60"	"6"	"60"	"2784649.47564697"	"HCD"	"MS2"	"5.385243"	"128.5"	"100.000"	"57.3733"	"18346"	"18346"	"18325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.5"	""	"183.3"	""	"175.8"	""	"184.2"	""	"264.0"	"229.9"	""	"767"	"35"	"35.000"	"28.000"	"0.0130847481607009"	""	"0.0001991"	"0.004111"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLDTSR"	"[R].gILLDTSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"552.33337"	"1103.65947"	"1103.66219"	"-2.46"	"-0.00136"	"6/60"	"6"	"60"	"2784649.47564697"	"HCD"	"MS2"	"5.385243"	"128.5"	"100.000"	"57.3733"	"18346"	"18346"	"18325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.5"	""	"183.3"	""	"175.8"	""	"184.2"	""	"264.0"	"229.9"	""	"767"	"35"	"35.000"	"28.000"	"0.0130847481607009"	""	"0.0001991"	"0.004111"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"552.33405"	"1103.66081"	"1103.66219"	"-1.25"	"-0.00069"	"6/68"	"6"	"68"	"13848362.0087891"	"HCD"	"MS2"	"0.3115757"	"516.8"	"100.000"	"57.6723"	"18468"	"18468"	"18450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"709.5"	""	"638.8"	""	"668.3"	""	"911.9"	""	"917.6"	"1057.5"	""	"781"	"41"	"35.000"	"28.000"	"0.00316680293091925"	""	"0.0001991"	"0.00501"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"552.33423"	"1103.66118"	"1103.66219"	"-0.91"	"-0.00050"	"6/68"	"6"	"68"	"7125500.68621826"	"HCD"	"MS2"	"0.54896"	"266.2"	"100.000"	"58.2293"	"18660"	"18660"	"18642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.3"	""	"308.4"	""	"342.2"	""	"472.5"	"3.2"	"485.0"	"546.9"	""	"781"	"39"	"35.000"	"28.000"	"0.00481527437375889"	"28"	"0.0001991"	"0.003981"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"552.33441"	"1103.66155"	"1103.66219"	"-0.58"	"-0.00032"	"6/68"	"6"	"68"	"6929819.61993408"	"HCD"	"MS2"	"0.9807577"	"269.8"	"100.000"	"57.9715"	"18591"	"18591"	"18574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"380.0"	""	"316.2"	""	"341.3"	""	"466.6"	"4.5"	"477.8"	"571.7"	""	"776"	"39"	"35.000"	"28.000"	"0.00485100503724475"	"28"	"0.0001991"	"0.00209"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLILTSR"	"[K].dGLILTSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"552.33459"	"1103.66191"	"1103.66219"	"-0.25"	"-0.00014"	"6/68"	"6"	"68"	"14723882.9636841"	"HCD"	"MS2"	"0"	"583.4"	"100.000"	"57.9256"	"18536"	"18536"	"18518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"869.1"	""	"704.0"	""	"722.2"	""	"1062.2"	""	"1022.4"	"1149.2"	""	"776"	"39"	"35.000"	"28.000"	"0.00475151085314839"	""	"0.0001991"	"0.004954"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILIDTSR"	"[R].gILIDTSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"552.33466"	"1103.66203"	"1103.66219"	"-0.14"	"-0.00008"	"7/60"	"7"	"60"	"988092.082885742"	"HCD"	"MS2"	"46.97102"	"57.6"	"100.000"	"59.4722"	"19167"	"19167"	"19144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.7"	""	"75.8"	""	"85.2"	""	"100.1"	"0.9"	"105.9"	"103.2"	""	"776"	"19"	"35.000"	"28.000"	"0.533128286304856"	"23"	"0.002588"	"0.02642"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILLDTSR"	"[R].gILLDTSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"Q641X3"	"Beta-hexosaminidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Hexa PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"552.33466"	"1103.66203"	"1103.66219"	"-0.14"	"-0.00008"	"7/60"	"7"	"60"	"988092.082885742"	"HCD"	"MS2"	"46.97102"	"57.6"	"100.000"	"59.4722"	"19167"	"19167"	"19144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.7"	""	"75.8"	""	"85.2"	""	"100.1"	"0.9"	"105.9"	"103.2"	""	"776"	"19"	"35.000"	"28.000"	"0.533128286304856"	"23"	"0.002588"	"0.02642"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVEAAK"	"[R].gAVEAAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"552.34454"	"1103.68181"	"1103.68248"	"-0.61"	"-0.00033"	"12/48"	"12"	"48"	"9621236.31964111"	"HCD"	"MS2"	"4.443665"	"665.7"	"100.000"	"30.2054"	"7305"	"7305"	"7288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1016.5"	""	"974.4"	""	"922.1"	""	"1001.9"	""	"1169.0"	"1218.6"	""	"505"	"42"	"34.000"	"27.000"	"0.00145633532006543"	"24"	"0.0009352"	"0.008375"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVEAAK"	"[R].gAVEAAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"Q6IRK9"	"Carboxypeptidase Q OS=Rattus norvegicus OX=10116 GN=Cpq PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"552.34473"	"1103.68218"	"1103.68248"	"-0.28"	"-0.00015"	"12/48"	"12"	"48"	"9135808.69976807"	"HCD"	"MS2"	"3.763643"	"647.3"	"100.000"	"30.0415"	"7279"	"7279"	"7264"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"951.6"	""	"954.2"	""	"901.8"	""	"1001.2"	""	"1133.8"	"1190.2"	""	"505"	"45"	"34.000"	"27.000"	"0.000865488661029787"	"25"	"0.002035"	"0.01779"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGVGIK"	"[K].nGGVGIk.[V]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"552.34497"	"1103.68266"	"1103.68248"	"0.17"	"0.00009"	"5/62"	"5"	"62"	"2254167.05169678"	"HCD"	"MS2"	"24.21736"	"156.5"	"100.000"	"43.6124"	"12728"	"12728"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.4"	""	"186.5"	""	"224.6"	""	"260.0"	"1.8"	"283.7"	"290.4"	""	"501"	"19"	"33.000"	"26.000"	"0.311033903051899"	"20"	"0.002508"	"0.02357"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSHTFR"	"[R].lDSHTFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"368.87097"	"1104.59836"	"1104.59992"	"-1.41"	"-0.00052"	"6/54"	"6"	"54"	"4015639.33795166"	"HCD"	"MS2"	"7.688884"	"166.8"	"100.000"	"33.2463"	"8525"	"8525"	"8508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.3"	""	"200.3"	""	"194.4"	""	"301.3"	""	"342.6"	"360.0"	""	"638"	"30"	"35.000"	"28.000"	"0.0292948098278262"	"25"	"0.00296"	"0.03186"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSHTFR"	"[R].lDSHTFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"368.87106"	"1104.59864"	"1104.59992"	"-1.17"	"-0.00043"	"5/54"	"5"	"54"	"5052514.8482666"	"HCD"	"MS2"	"4.507076"	"195.1"	"100.000"	"33.5632"	"8654"	"8654"	"8636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.6"	""	"219.6"	""	"229.1"	""	"386.8"	""	"419.6"	"421.1"	""	"638"	"32"	"35.000"	"28.000"	"0.0190016223785754"	"27"	"0.001348"	"0.01059"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSHTFR"	"[R].lDSHTFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"368.87115"	"1104.59891"	"1104.59992"	"-0.92"	"-0.00034"	"6/54"	"6"	"54"	"2439010.01617432"	"HCD"	"MS2"	"11.63278"	"109.1"	"100.000"	"33.5216"	"8675"	"8675"	"8649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.0"	""	"122.2"	""	"133.5"	""	"215.8"	""	"220.9"	"233.8"	""	"638"	"29"	"35.000"	"28.000"	"0.0378260230665324"	"23"	"0.00455"	"0.05315"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSHTFR"	"[R].lDSHTFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"368.87122"	"1104.59909"	"1104.59992"	"-0.75"	"-0.00028"	"6/54"	"6"	"54"	"8139057.99053955"	"HCD"	"MS2"	"2.574384"	"288.1"	"100.000"	"33.1839"	"8537"	"8537"	"8521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"301.5"	""	"332.9"	""	"334.9"	""	"521.8"	""	"619.7"	"635.3"	""	"780"	"28"	"35.000"	"28.000"	"0.0565021022882456"	"28"	"0.002834"	"0.03054"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEPTLR"	"[K].fLEPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"552.83392"	"1104.66057"	"1104.66146"	"-0.81"	"-0.00045"	"8/52"	"8"	"52"	"1009237.27093506"	"HCD"	"MS2"	"5.073046"	"49.6"	"100.000"	"82.3928"	"28465"	"28465"	"28447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.2"	""	"72.1"	""	"69.5"	""	"75.5"	""	"91.5"	"87.5"	""	"672"	"25"	"35.000"	"28.000"	"0.107978994098315"	"27"	"0.005507"	"0.06998"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPVLYR"	"[K].lDPVLYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"552.83398"	"1104.66069"	"1104.66146"	"-0.70"	"-0.00038"	"5/48"	"5"	"48"	"1048973.02954102"	"HCD"	"MS2"	"9.528613"	"51.4"	"100.000"	"77.5348"	"26491"	"26491"	"26478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.4"	""	"69.1"	""	"72.2"	""	"82.4"	""	"91.9"	"101.4"	""	"672"	"27"	"35.000"	"28.000"	"0.0632906094068573"	"15"	"0.002525"	"0.02381"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEPTLR"	"[K].fLEPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"552.83411"	"1104.66094"	"1104.66146"	"-0.48"	"-0.00026"	"7/52"	"7"	"52"	"1119819.23583984"	"HCD"	"MS2"	"20.05917"	"57.7"	"100.000"	"82.4509"	"28513"	"28513"	"28490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"91.5"	""	"74.7"	""	"93.1"	""	"105.1"	"106.2"	""	"672"	"19"	"35.000"	"28.000"	"0.398418299384165"	"25"	"0.00212"	"0.01899"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEPTLR"	"[K].fLEPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"552.83417"	"1104.66106"	"1104.66146"	"-0.36"	"-0.00020"	"7/52"	"7"	"52"	"2364749.87115479"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"82.7024"	"28587"	"28587"	"28571"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.8"	""	"140.8"	""	"147.8"	""	"169.9"	"0.2"	"200.2"	"186.1"	""	"672"	"21"	"35.000"	"28.000"	"0.28466841115124"	"27"	"0.003317"	"0.03606"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVLVER"	"[K].yPVLVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"552.83423"	"1104.66118"	"1104.66146"	"-0.25"	"-0.00014"	"5/48"	"5"	"48"	"1326793.72766113"	"HCD"	"MS2"	"14.32832"	"66.2"	"100.000"	"62.8117"	"20554"	"20554"	"20536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.0"	""	"85.0"	""	"97.6"	""	"103.8"	"1.9"	"128.2"	"120.4"	""	"672"	"19"	"35.000"	"28.000"	"0.464878303334518"	"28"	"0.001872"	"0.0157"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEPTLR"	"[K].fLEPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"552.83429"	"1104.66130"	"1104.66146"	"-0.14"	"-0.00008"	"5/52"	"5"	"52"	"2690737.17456055"	"HCD"	"MS2"	"0"	"120.1"	"100.000"	"82.7455"	"28632"	"28632"	"28614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.8"	""	"159.6"	""	"165.6"	""	"185.5"	""	"230.6"	"233.1"	""	"672"	"23"	"35.000"	"28.000"	"0.152173586847616"	"27"	"0.003529"	"0.03874"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPVLYR"	"[K].lDPVLYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"552.83435"	"1104.66142"	"1104.66146"	"-0.03"	"-0.00002"	"5/48"	"5"	"48"	"1079201.20275879"	"HCD"	"MS2"	"0"	"57.0"	"100.000"	"77.4640"	"26491"	"26491"	"26479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.7"	""	"77.3"	""	"78.7"	""	"89.8"	""	"110.9"	"109.9"	""	"672"	"22"	"35.000"	"28.000"	"0.200603856292169"	"18"	"0.001162"	"0.009251"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVLVER"	"[K].yPVLVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"552.83447"	"1104.66167"	"1104.66146"	"0.19"	"0.00010"	"5/48"	"5"	"48"	"988754.153625488"	"HCD"	"MS2"	"30.9606"	"50.1"	"100.000"	"62.5624"	"20420"	"20420"	"20395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"69.4"	""	"61.6"	""	"76.6"	"1.5"	"103.1"	"98.1"	""	"672"	"24"	"35.000"	"28.000"	"0.133149419509828"	"28"	"0.001488"	"0.01253"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVLVER"	"[K].yPVLVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"0"	"2"	"2"	"0.1579"	"0.0000"	"1"	"1"	"1"	"552.83447"	"1104.66167"	"1104.66146"	"0.19"	"0.00010"	"6/48"	"6"	"48"	"1423124.01647949"	"HCD"	"MS2"	"4.338313"	"71.9"	"100.000"	"62.8848"	"20551"	"20551"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.2"	""	"91.5"	""	"103.6"	""	"118.2"	""	"134.6"	"137.7"	""	"672"	"19"	"35.000"	"28.000"	"0.424951412750307"	""	"0.002286"	"0.02154"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPVLYR"	"[K].lDPVLYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"Q62638"	"Golgi apparatus protein 1 OS=Rattus norvegicus OX=10116 GN=Glg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"552.83459"	"1104.66191"	"1104.66146"	"0.41"	"0.00023"	"5/48"	"5"	"48"	"549446.648193359"	"HCD"	"MS2"	"10.16333"	"27.0"	"100.000"	"77.7873"	"26621"	"26621"	"26596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"33.1"	""	"38.9"	""	"42.3"	"0.9"	"52.2"	"50.7"	""	"629"	"17"	"34.000"	"27.000"	"0.664692303028626"	"14"	"0.00296"	"0.03182"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPVLVER"	"[K].yPVLVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"P0C6P5"	"Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"552.83478"	"1104.66228"	"1104.66146"	"0.74"	"0.00041"	"6/48"	"6"	"48"	"1051277.75250244"	"HCD"	"MS2"	"33.12288"	"51.1"	"100.000"	"62.5101"	"20432"	"20432"	"20408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.3"	""	"69.4"	""	"66.9"	""	"75.8"	"0.4"	"108.8"	"95.6"	""	"629"	"17"	"34.000"	"27.000"	"0.577591308983056"	""	"0.002035"	"0.01847"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGGGQK"	"[R].tVGGGQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"552.84241"	"1104.67754"	"1104.67773"	"-0.17"	"-0.00010"	"8/50"	"8"	"50"	"968991.09979248"	"HCD"	"MS2"	"10.03919"	"93.9"	"100.000"	"24.6125"	"5078"	"5078"	"5055"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.4"	""	"108.3"	""	"115.7"	""	"159.6"	"1.3"	"180.6"	"198.4"	""	"485"	"18"	"33.000"	"26.000"	"0.351327174484605"	"24"	"0.001999"	"0.01742"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNMEDLR"	"[R].vNMEDLR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1;Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B3GNI6; B0BNF1"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1; Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"553.29779"	"1105.58830"	"1105.58731"	"0.90"	"0.00050"	"5/60"	"5"	"60"	"4303405.0690918"	"HCD"	"MS2"	"7.709119"	"182.5"	"100.000"	"53.8034"	"16899"	"16899"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.7"	""	"242.5"	""	"243.4"	""	"295.5"	"0.8"	"330.5"	"343.5"	""	"753"	"41"	"35.000"	"28.000"	"0.00303923988888688"	""	"0.001615"	"0.0136"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEINPR"	"[K].tFEINPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"553.31335"	"1105.61943"	"1105.62032"	"-0.81"	"-0.00045"	"5/56"	"5"	"56"	"17718828.4267578"	"HCD"	"MS2"	"9.297123"	"488.0"	"60.680"	"52.8599"	"16515"	"16515"	"16498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"777.9"	""	"695.8"	""	"723.7"	""	"736.3"	""	"854.7"	"839.3"	""	"777"	"27"	"35.000"	"28.000"	"0.0733484639123911"	"18"	"0.008718"	"0.1108"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEINPR"	"[K].tFEINPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"553.31348"	"1105.61968"	"1105.62032"	"-0.59"	"-0.00032"	"5/56"	"5"	"56"	"10213794.6517944"	"HCD"	"MS2"	"22.98152"	"489.3"	"100.000"	"53.0483"	"16557"	"16557"	"16538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"769.5"	""	"681.8"	""	"746.0"	""	"770.1"	""	"839.4"	"829.9"	""	"776"	"25"	"35.000"	"28.000"	"0.133300483785151"	"18"	"0.006997"	"0.08826"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEINPR"	"[K].tFEINPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"553.31396"	"1105.62065"	"1105.62032"	"0.30"	"0.00016"	"5/56"	"5"	"56"	"8262170.49377441"	"HCD"	"MS2"	"0.7174895"	"343.6"	"91.023"	"53.1706"	"16642"	"16642"	"16625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"523.7"	""	"475.3"	""	"508.1"	""	"509.4"	"3.0"	"625.6"	"608.6"	""	"767"	"29"	"35.000"	"28.000"	"0.0486144490556484"	"18"	"0.005392"	"0.06838"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASEIMLR"	"[K].gASEIMLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"553.31525"	"1105.62322"	"1105.62370"	"-0.43"	"-0.00024"	"6/58"	"6"	"58"	"3947933.57714844"	"HCD"	"MS2"	"55.12782"	"192.4"	"100.000"	"50.0468"	"15373"	"15373"	"15355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.4"	""	"234.9"	""	"232.4"	""	"325.5"	""	"402.0"	"417.3"	""	"746"	"14"	"35.000"	"28.000"	"1.56209999788983"	"22"	"0.001217"	"0.009504"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASEIMLR"	"[K].gASEIMLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"553.31531"	"1105.62334"	"1105.62370"	"-0.32"	"-0.00018"	"6/58"	"6"	"58"	"3922428.20715332"	"HCD"	"MS2"	"49.40765"	"193.8"	"100.000"	"50.4025"	"15483"	"15483"	"15462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.7"	""	"228.8"	""	"248.7"	""	"334.8"	""	"390.9"	"438.5"	""	"746"	"10"	"35.000"	"28.000"	"3.79934587744185"	"21"	"0.002035"	"0.01859"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDVGFR"	"[K].vAIDVGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"553.33185"	"1105.65642"	"1105.65671"	"-0.26"	"-0.00015"	"6/56"	"6"	"56"	"480492.05657959"	"HCD"	"MS2"	"23.99977"	"27.1"	"100.000"	"88.9468"	"31098"	"31098"	"31073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.1"	""	"46.2"	""	"39.9"	""	"41.4"	"0.5"	"46.9"	"50.1"	""	"510"	"26"	"34.000"	"27.000"	"0.0672264503385472"	"25"	"0.0001991"	"0.004419"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDVGFR"	"[K].vAIDVGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"553.33252"	"1105.65776"	"1105.65671"	"0.95"	"0.00053"	"6/56"	"6"	"56"	"543055.239501953"	"HCD"	"MS2"	"18.3168"	"31.6"	"100.000"	"88.9065"	"31121"	"31121"	"31100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"41.5"	""	"47.3"	""	"50.1"	"1.3"	"51.9"	"60.0"	""	"480"	"25"	"33.000"	"26.000"	"0.069057561953656"	"18"	"0.0001686"	"0.001883"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVGAGK"	"[K].eSVGAGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"553.33429"	"1105.66130"	"1105.66174"	"-0.40"	"-0.00022"	"6/50"	"6"	"50"	"5613378.1350708"	"HCD"	"MS2"	"4.780175"	"384.4"	"100.000"	"28.2295"	"6505"	"6505"	"6489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"673.3"	""	"597.0"	""	"563.5"	""	"568.6"	""	"614.3"	"622.9"	""	"471"	"31"	"33.000"	"26.000"	"0.020416952174106"	""	"0.002525"	"0.02424"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESVGAGK"	"[K].eSVGAGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"553.33435"	"1105.66142"	"1105.66174"	"-0.29"	"-0.00016"	"6/50"	"6"	"50"	"10484738.7538452"	"HCD"	"MS2"	"8.030126"	"699.5"	"100.000"	"28.0267"	"6466"	"6466"	"6445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1232.1"	""	"1080.6"	""	"1031.2"	""	"1005.4"	"2.1"	"1132.2"	"1126.7"	""	"471"	"32"	"33.000"	"26.000"	"0.01489329909991"	""	"0.002525"	"0.02445"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"553.78894"	"1106.57060"	"1106.57133"	"-0.65"	"-0.00036"	"6/54"	"6"	"54"	"8960080.16918945"	"HCD"	"MS2"	"9.18131"	"408.6"	"100.000"	"65.5037"	"21649"	"21649"	"21632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"494.9"	""	"468.4"	""	"537.9"	""	"652.9"	""	"850.7"	"880.7"	""	"586"	"33"	"34.000"	"27.000"	"0.0162131582000211"	""	"0.002189"	"0.02084"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"553.78900"	"1106.57073"	"1106.57133"	"-0.54"	"-0.00030"	"6/54"	"6"	"54"	"1988739.63275146"	"HCD"	"MS2"	"42.38251"	"95.5"	"100.000"	"65.8077"	"21772"	"21772"	"21757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.0"	""	"114.0"	""	"136.1"	""	"152.3"	""	"191.6"	"195.9"	""	"584"	"29"	"34.000"	"27.000"	"0.0381401899334498"	""	"0.001596"	"0.01297"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"553.78925"	"1106.57121"	"1106.57133"	"-0.10"	"-0.00006"	"6/54"	"6"	"54"	"5371739.98596191"	"HCD"	"MS2"	"1.381701"	"261.3"	"100.000"	"65.2376"	"21506"	"21506"	"21489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.2"	""	"285.7"	""	"317.5"	""	"453.2"	"0.8"	"539.4"	"574.6"	""	"587"	"44"	"34.000"	"27.000"	"0.00107302071338452"	""	"0.0001991"	"0.004034"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"553.78949"	"1106.57170"	"1106.57133"	"0.34"	"0.00019"	"8/54"	"8"	"54"	"1165998.51849365"	"HCD"	"MS2"	"44.56651"	"62.4"	"100.000"	"65.8986"	"21776"	"21776"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.8"	""	"73.7"	""	"88.4"	""	"92.8"	""	"127.7"	"125.6"	""	"599"	"23"	"34.000"	"27.000"	"0.156818330757432"	""	"0.001488"	"0.01213"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"553.78949"	"1106.57170"	"1106.57133"	"0.34"	"0.00019"	"6/54"	"6"	"54"	"7982230.41784668"	"HCD"	"MS2"	"10.17309"	"356.9"	"100.000"	"65.5440"	"21632"	"21632"	"21615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"422.9"	""	"386.4"	""	"454.3"	""	"581.6"	""	"762.4"	"786.8"	""	"599"	"41"	"34.000"	"27.000"	"0.00229824766063865"	""	"0.0005161"	"0.007014"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMDDLDR"	"[R].lMDDLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"553.78979"	"1106.57231"	"1106.57133"	"0.89"	"0.00049"	"6/54"	"6"	"54"	"5458155.42645264"	"HCD"	"MS2"	"1.270361"	"258.0"	"100.000"	"65.2019"	"21525"	"21525"	"21505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"305.4"	"2.3"	"296.4"	""	"319.8"	""	"427.5"	""	"541.7"	"559.9"	""	"598"	"46"	"34.000"	"27.000"	"0.000672467327144899"	""	"0.0001991"	"0.004613"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].SEIDLFNIR.[K]"	""	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"553.79437"	"1106.58147"	"1106.58405"	"-2.33"	"-0.00129"	"7/74"	"7"	"74"	"377767.629638672"	"HCD"	"MS2"	"22.69221"	"11.5"	"100.000"	"99.9699"	"35580"	"35580"	"35558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	""	"9.7"	""	"15.9"	""	"15.9"	""	"33.4"	"21.9"	"NoQuanLabels"	"613"	"13"	"34.000"	"27.000"	"1.47716999972101"	"18"	"0.009444"	"0.125"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLSQPR"	"[R].nYLSQPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"553.81134"	"1106.61540"	"1106.61557"	"-0.15"	"-0.00008"	"5/60"	"5"	"60"	"8758470.44873047"	"HCD"	"MS2"	"28.92043"	"512.7"	"100.000"	"34.6835"	"9146"	"9146"	"9120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"766.5"	""	"661.9"	""	"697.8"	""	"797.6"	""	"960.8"	"983.9"	""	"703"	"25"	"35.000"	"28.000"	"0.124430065390827"	"24"	"0.005712"	"0.07093"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLSQPR"	"[R].nYLSQPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"553.81140"	"1106.61553"	"1106.61557"	"-0.04"	"-0.00002"	"5/60"	"5"	"60"	"8738566.33660889"	"HCD"	"MS2"	"28.58759"	"514.5"	"100.000"	"34.7892"	"9152"	"9152"	"9131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"758.7"	""	"685.9"	""	"683.5"	""	"813.2"	""	"963.1"	"980.1"	""	"717"	"24"	"35.000"	"28.000"	"0.133195379631336"	"24"	"0.004392"	"0.05222"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"553.82129"	"1106.63530"	"1106.63670"	"-1.27"	"-0.00070"	"6/76"	"6"	"76"	"9313814.02374268"	"HCD"	"MS2"	"5.252141"	"391.9"	"100.000"	"25.7958"	"5550"	"5550"	"5526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"597.0"	"3.2"	"458.5"	""	"573.8"	""	"622.2"	""	"628.0"	"833.5"	""	"648"	"29"	"35.000"	"28.000"	"0.0405083925790541"	"24"	"0.0001991"	"0.004943"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"553.82153"	"1106.63579"	"1106.63670"	"-0.83"	"-0.00046"	"5/76"	"5"	"76"	"1831646.94439697"	"HCD"	"MS2"	"26.79407"	"151.2"	"100.000"	"25.9515"	"5653"	"5653"	"5635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.1"	""	"166.4"	""	"219.7"	""	"256.8"	""	"331.8"	"281.8"	""	"648"	"18"	"35.000"	"28.000"	"0.517064843704702"	"18"	"0.00192"	"0.01603"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"553.82190"	"1106.63652"	"1106.63670"	"-0.16"	"-0.00009"	"7/76"	"7"	"76"	"9874297.31640625"	"HCD"	"MS2"	"10.87839"	"395.4"	"100.000"	"25.6443"	"5528"	"5528"	"5502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"654.7"	""	"475.4"	""	"562.5"	""	"641.1"	""	"619.4"	"788.5"	""	"641"	"28"	"35.000"	"28.000"	"0.046970808302637"	"24"	"0.0007633"	"0.007486"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQTTATSR"	"[R].lQTTATSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"553.82196"	"1106.63664"	"1106.63670"	"-0.05"	"-0.00003"	"5/76"	"5"	"76"	"1572222.41009521"	"HCD"	"MS2"	"0"	"125.6"	"100.000"	"26.0915"	"5670"	"5670"	"5655"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.1"	""	"132.0"	""	"181.7"	""	"206.8"	""	"276.7"	"241.6"	""	"641"	"21"	"35.000"	"28.000"	"0.231114947078119"	"20"	"0.0001991"	"0.002634"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYIGVVNR"	"[R].gYIGVVNR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"553.82855"	"1106.64983"	"1106.65196"	"-1.93"	"-0.00107"	"6/60"	"6"	"60"	"2357966.53137207"	"HCD"	"MS2"	"0"	"137.6"	"100.000"	"46.3389"	"13837"	"13837"	"13825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.9"	""	"196.3"	""	"202.7"	""	"198.0"	""	"256.0"	"252.3"	""	"453"	"28"	"33.000"	"26.000"	"0.0393611887711734"	"23"	"0.0001991"	"0.004513"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYIGVVNR"	"[R].gYIGVVNR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P21575; P39052"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"553.82861"	"1106.64995"	"1106.65196"	"-1.82"	"-0.00100"	"6/60"	"6"	"60"	"2510004.95288086"	"HCD"	"MS2"	"21.26703"	"144.9"	"100.000"	"46.0433"	"13752"	"13752"	"13733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.8"	""	"211.3"	""	"231.7"	""	"207.1"	"2.6"	"249.1"	"238.5"	""	"450"	"28"	"33.000"	"26.000"	"0.0364907271905759"	"23"	"0.0001991"	"0.002307"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQEMIAR"	"[R].mQEMIAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"554.29559"	"1107.58391"	"1107.58520"	"-1.17"	"-0.00065"	"5/58"	"5"	"58"	"1727923.52038574"	"HCD"	"MS2"	"56.69542"	"118.9"	"100.000"	"47.7404"	"14438"	"14438"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.2"	""	"155.1"	""	"137.3"	""	"147.0"	""	"225.8"	"239.2"	""	"675"	"16"	"35.000"	"28.000"	"0.871512814339175"	"27"	"0.005507"	"0.06986"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQEMIAR"	"[R].mQEMIAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"554.29572"	"1107.58415"	"1107.58520"	"-0.95"	"-0.00052"	"5/58"	"5"	"58"	"2090861.24066162"	"HCD"	"MS2"	"44.76451"	"136.1"	"100.000"	"48.0812"	"14539"	"14539"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.9"	""	"194.9"	""	"137.3"	""	"166.9"	"3.6"	"271.4"	"265.0"	""	"675"	"19"	"35.000"	"28.000"	"0.451100986834424"	"25"	"0.004852"	"0.05971"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"554.30292"	"1107.59856"	"1107.59959"	"-0.93"	"-0.00052"	"6/62"	"6"	"62"	"2269732.03912354"	"HCD"	"MS2"	"2.650368"	"114.4"	"100.000"	"60.2160"	"19503"	"19503"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.7"	""	"138.5"	""	"126.2"	""	"192.8"	""	"252.6"	"235.9"	""	"659"	"43"	"35.000"	"28.000"	"0.00179827215229574"	"27"	"9.9E-05"	"0.0006298"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"554.30298"	"1107.59868"	"1107.59959"	"-0.82"	"-0.00045"	"11/62"	"11"	"62"	"3783573.61077881"	"HCD"	"MS2"	"0"	"170.5"	"100.000"	"60.6168"	"19633"	"19633"	"19618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.6"	""	"191.3"	""	"186.9"	""	"302.9"	""	"362.1"	"391.6"	""	"663"	"35"	"35.000"	"28.000"	"0.0111297019121539"	"25"	"0.0001686"	"0.00149"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVNDDR"	"[R].iFVNDDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"554.30304"	"1107.59880"	"1107.59959"	"-0.71"	"-0.00039"	"5/56"	"5"	"56"	"1445689.75268555"	"HCD"	"MS2"	"21.42385"	"97.8"	"100.000"	"51.1070"	"15805"	"15805"	"15782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.3"	""	"108.5"	""	"107.8"	""	"177.6"	""	"205.8"	"217.3"	""	"662"	"38"	"35.000"	"28.000"	"0.00491844697597"	""	"0.0001991"	"0.003366"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"554.30316"	"1107.59905"	"1107.59959"	"-0.49"	"-0.00027"	"6/62"	"6"	"62"	"3624453.54785156"	"HCD"	"MS2"	"0"	"176.8"	"100.000"	"60.4877"	"19613"	"19613"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.4"	""	"202.3"	""	"201.3"	""	"310.5"	""	"369.8"	"406.2"	""	"659"	"41"	"35.000"	"28.000"	"0.0027406616257833"	"25"	"0.0001686"	"0.001943"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDFGEAAR"	"[K].iDFGEAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"P08753"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"554.30353"	"1107.59978"	"1107.59959"	"0.17"	"0.00009"	"9/62"	"9"	"62"	"1885887.12573242"	"HCD"	"MS2"	"2.219335"	"96.6"	"100.000"	"60.3336"	"19517"	"19517"	"19496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.8"	""	"110.6"	""	"115.9"	""	"177.6"	""	"196.7"	"199.5"	""	"680"	"31"	"35.000"	"28.000"	"0.026945045236336"	"26"	"0.0001991"	"0.002688"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFVNDDR"	"[R].iFVNDDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"Q9JIL3"	"Interleukin enhancer-binding factor 3 OS=Rattus norvegicus OX=10116 GN=Ilf3 PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"554.30353"	"1107.59978"	"1107.59959"	"0.17"	"0.00009"	"7/56"	"7"	"56"	"1606095.18200684"	"HCD"	"MS2"	"38.30776"	"104.7"	"100.000"	"51.3335"	"15860"	"15860"	"15837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.6"	""	"113.0"	""	"118.2"	""	"206.2"	""	"217.7"	"230.4"	""	"680"	"30"	"35.000"	"28.000"	"0.0322462277522305"	"28"	"0.0003938"	"0.006316"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVIWDK"	"[R].MSVIWDk.[A]"	"K7(TMT6plex)"	"2"	"2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"554.30695"	"1107.60661"	"1107.60698"	"-0.33"	"-0.00018"	"5/56"	"5"	"56"	"377556.186401367"	"HCD"	"MS2"	"18.5787"	"24.6"	"100.000"	"78.3240"	"26812"	"26812"	"26790"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"31.2"	""	"33.7"	""	"39.9"	"1.6"	"43.5"	"49.6"	""	"710"	"33"	"35.000"	"28.000"	"0.0181647051616809"	""	"0.008255"	"0.1046"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"554.32104"	"1107.63481"	"1107.63597"	"-1.05"	"-0.00058"	"6/58"	"6"	"58"	"572580.001831055"	"HCD"	"MS2"	"5.46971"	"30.9"	"100.000"	"86.3590"	"30061"	"30061"	"30041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"48.7"	""	"40.0"	""	"58.2"	"0.7"	"45.7"	"51.8"	""	"538"	"39"	"34.000"	"27.000"	"0.00335546165331352"	""	"9.9E-05"	"0.0007895"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"554.32104"	"1107.63481"	"1107.63597"	"-1.05"	"-0.00058"	"6/58"	"6"	"58"	"1467554.56762695"	"HCD"	"MS2"	"32.03099"	"75.2"	"100.000"	"84.9073"	"29476"	"29476"	"29456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.7"	""	"115.1"	""	"108.0"	""	"120.8"	"0.1"	"119.1"	"139.3"	""	"538"	"38"	"34.000"	"27.000"	"0.00475064173764578"	"27"	"9.9E-05"	"0.0008168"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"554.32111"	"1107.63494"	"1107.63597"	"-0.94"	"-0.00052"	"6/58"	"6"	"58"	"1346795.24951172"	"HCD"	"MS2"	"0"	"66.7"	"100.000"	"86.0524"	"29939"	"29939"	"29921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.9"	""	"87.7"	""	"109.5"	""	"109.0"	""	"105.6"	"117.8"	""	"540"	"39"	"34.000"	"27.000"	"0.00307867442641515"	""	"0.0001991"	"0.002616"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"554.32117"	"1107.63506"	"1107.63597"	"-0.83"	"-0.00046"	"6/58"	"6"	"58"	"8808635.21069336"	"HCD"	"MS2"	"0"	"373.3"	"100.000"	"85.7665"	"29824"	"29824"	"29808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"583.6"	""	"528.8"	""	"511.6"	""	"610.6"	""	"604.3"	"696.4"	""	"542"	"40"	"34.000"	"27.000"	"0.00292394561724283"	""	"0.0001991"	"0.003028"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQESLR"	"[K].vFQESLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"554.32123"	"1107.63518"	"1107.63597"	"-0.72"	"-0.00040"	"5/58"	"5"	"58"	"1726566.73168945"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"55.9072"	"17753"	"17753"	"17744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.3"	""	"123.5"	""	"130.1"	""	"149.7"	"0.1"	"167.9"	"173.2"	""	"539"	"26"	"34.000"	"27.000"	"0.0614552188404112"	"21"	"0.00296"	"0.03143"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"554.32135"	"1107.63542"	"1107.63597"	"-0.50"	"-0.00028"	"6/58"	"6"	"58"	"1300185.97137451"	"HCD"	"MS2"	"26.4877"	"65.7"	"100.000"	"84.9040"	"29504"	"29504"	"29485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.3"	""	"101.1"	""	"95.1"	""	"101.8"	"1.4"	"108.3"	"105.6"	""	"539"	"39"	"34.000"	"27.000"	"0.00349589813530176"	""	"9.9E-05"	"0.0007585"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"554.32147"	"1107.63567"	"1107.63597"	"-0.28"	"-0.00015"	"6/58"	"6"	"58"	"599043.938293457"	"HCD"	"MS2"	"38.61803"	"30.0"	"100.000"	"86.6929"	"30225"	"30225"	"30210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.5"	""	"40.9"	""	"39.6"	""	"53.3"	""	"56.9"	"55.0"	""	"539"	"11"	"34.000"	"27.000"	"2.34724687493163"	"14"	"0.002588"	"0.02716"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"554.32147"	"1107.63567"	"1107.63597"	"-0.28"	"-0.00015"	"6/58"	"6"	"58"	"1115099.52862549"	"HCD"	"MS2"	"0"	"53.1"	"100.000"	"86.0910"	"29985"	"29985"	"29967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.6"	""	"74.9"	""	"70.4"	""	"87.6"	"0.0"	"85.1"	"98.7"	""	"539"	"38"	"34.000"	"27.000"	"0.00456624037220555"	""	"9.9E-05"	"0.0007833"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFQESLR"	"[K].vFQESLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"554.32147"	"1107.63567"	"1107.63597"	"-0.28"	"-0.00015"	"5/58"	"5"	"58"	"1382478.86395264"	"HCD"	"MS2"	"13.35061"	"77.6"	"100.000"	"56.2570"	"17860"	"17860"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.6"	""	"90.2"	""	"117.8"	""	"123.5"	"0.8"	"140.5"	"158.2"	""	"539"	"29"	"34.000"	"27.000"	"0.0313010401429972"	"23"	"0.001615"	"0.01416"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"554.32147"	"1107.63567"	"1107.63597"	"-0.28"	"-0.00015"	"6/58"	"6"	"58"	"7630557.5223999"	"HCD"	"MS2"	"0"	"301.2"	"100.000"	"85.7869"	"29862"	"29862"	"29846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"463.9"	""	"418.9"	""	"429.3"	""	"467.4"	""	"505.2"	"573.2"	""	"539"	"40"	"34.000"	"27.000"	"0.00292118303328714"	""	"0.0001991"	"0.002482"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"554.32159"	"1107.63591"	"1107.63597"	"-0.06"	"-0.00003"	"6/58"	"6"	"58"	"553676.512939453"	"HCD"	"MS2"	"3.871344"	"31.5"	"100.000"	"86.3768"	"30100"	"30100"	"30087"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"40.1"	""	"44.8"	""	"48.5"	""	"50.0"	"64.8"	""	"543"	"37"	"34.000"	"27.000"	"0.00492912502442907"	"27"	"0.0001686"	"0.001937"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGIVGYDV"	"[K].rGIVGYDV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"Q6PDU7"	"ATP synthase subunit g, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mg PE=1 SV=2"	"1"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"554.32159"	"1107.63591"	"1107.63597"	"-0.06"	"-0.00003"	"9/56"	"9"	"56"	"1108909.97045898"	"HCD"	"MS2"	"8.513955"	"48.5"	"100.000"	"57.3553"	"18303"	"18303"	"18284"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.3"	""	"60.0"	""	"63.7"	""	"81.3"	""	"90.4"	"89.5"	""	"543"	"16"	"34.000"	"27.000"	"0.68354928588653"	"15"	"0.00981"	"0.1326"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"554.32172"	"1107.63616"	"1107.63597"	"0.16"	"0.00009"	"6/58"	"6"	"58"	"483468.246276855"	"HCD"	"MS2"	"21.64392"	"24.8"	"100.000"	"86.6590"	"30178"	"30178"	"30158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.5"	""	"33.6"	""	"36.9"	""	"40.8"	"0.5"	"41.7"	"43.9"	""	"543"	"22"	"34.000"	"27.000"	"0.187832108604491"	"23"	"0.0009352"	"0.007924"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSDIQIR"	"[K].fSDIQIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"554.32178"	"1107.63628"	"1107.63597"	"0.27"	"0.00015"	"6/54"	"6"	"54"	"518685.635192871"	"HCD"	"MS2"	"17.84308"	"36.6"	"100.000"	"73.2861"	"24801"	"24801"	"24771"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"46.2"	""	"52.9"	""	"57.4"	"0.4"	"75.6"	"59.9"	""	"549"	"14"	"34.000"	"27.000"	"0.985240710600539"	"16"	"0.005266"	"0.06743"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"554.32178"	"1107.63628"	"1107.63597"	"0.27"	"0.00015"	"6/58"	"6"	"58"	"23826977.7896118"	"HCD"	"MS2"	"1.112184"	"660.1"	"70.617"	"85.1907"	"29592"	"29592"	"29575"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1036.5"	""	"957.5"	""	"963.3"	""	"1098.9"	""	"1037.3"	"1156.3"	""	"549"	"40"	"34.000"	"27.000"	"0.00298911310620027"	""	"0.0001991"	"0.005125"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"554.32196"	"1107.63664"	"1107.63597"	"0.60"	"0.00033"	"6/58"	"6"	"58"	"23765581.5866089"	"HCD"	"MS2"	"1.648486"	"624.2"	"68.530"	"85.1924"	"29622"	"29622"	"29605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1011.0"	""	"891.3"	""	"864.0"	""	"1038.7"	""	"1021.9"	"1078.8"	""	"531"	"40"	"34.000"	"27.000"	"0.00285144188976601"	"24"	"0.0001991"	"0.004121"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"554.32208"	"1107.63689"	"1107.63597"	"0.82"	"0.00046"	"6/58"	"6"	"58"	"53603433.7250977"	"HCD"	"MS2"	"0.05197866"	"380.0"	"17.653"	"85.4849"	"29741"	"29741"	"29724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"586.6"	""	"529.4"	""	"548.1"	""	"610.0"	""	"646.4"	"676.8"	""	"531"	"41"	"34.000"	"27.000"	"0.00189698774573049"	"25"	"0.0001991"	"0.003918"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAFGLLR"	"[K].dSAFGLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"554.32288"	"1107.63848"	"1107.63597"	"2.26"	"0.00125"	"6/58"	"6"	"58"	"44215390.3765869"	"HCD"	"MS2"	"0.05470081"	"536.3"	"29.549"	"85.4718"	"29706"	"29706"	"29689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"853.0"	""	"756.3"	""	"760.5"	""	"851.7"	""	"886.7"	"968.9"	""	"492"	"40"	"33.000"	"26.000"	"0.00267876802960025"	"24"	"0.0003938"	"0.006376"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHPVQER"	"[RK].iHPVQER.[IL]"	"N-Term(TMT6plex)"	"2"	"2"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80; Q5QE79"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"554.32654"	"1107.64580"	"1107.64721"	"-1.27"	"-0.00070"	"6/52"	"6"	"52"	"852590.014038086"	"HCD"	"MS2"	"20.89773"	"52.3"	"100.000"	"21.6724"	"3985"	"3985"	"3968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.3"	""	"67.6"	""	"72.5"	""	"72.0"	""	"95.9"	"109.1"	""	"509"	"19"	"34.000"	"27.000"	"0.298323720531999"	"14"	"0.00212"	"0.01949"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHPVQER"	"[RK].lHPVQER.[IL]"	"N-Term(TMT6plex)"	"2"	"3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q9Z0U5; Q5QE78; P22985"	"Aldehyde oxidase 1 OS=Rattus norvegicus OX=10116 GN=Aox1 PE=1 SV=1; Aldehyde oxidase 2 OS=Rattus norvegicus OX=10116 GN=Aox2 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"554.32654"	"1107.64580"	"1107.64721"	"-1.27"	"-0.00070"	"6/52"	"6"	"52"	"852590.014038086"	"HCD"	"MS2"	"20.89773"	"52.3"	"100.000"	"21.6724"	"3985"	"3985"	"3968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.3"	""	"67.6"	""	"72.5"	""	"72.0"	""	"95.9"	"109.1"	""	"509"	"19"	"34.000"	"27.000"	"0.298323720531999"	"14"	"0.00212"	"0.01949"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"554.78961"	"1108.57195"	"1108.57371"	"-1.59"	"-0.00088"	"6/56"	"6"	"56"	"1515583.09191895"	"HCD"	"MS2"	"13.22676"	"86.1"	"100.000"	"66.3194"	"21947"	"21947"	"21938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.1"	""	"107.6"	""	"127.5"	""	"135.8"	"2.2"	"133.1"	"168.2"	""	"543"	"30"	"34.000"	"27.000"	"0.0278464497977257"	"26"	"0.0001686"	"0.001818"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"554.78973"	"1108.57219"	"1108.57371"	"-1.37"	"-0.00076"	"6/56"	"6"	"56"	"9099840.10955811"	"HCD"	"MS2"	"0"	"410.7"	"100.000"	"66.5873"	"22053"	"22053"	"22043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"658.4"	""	"537.1"	""	"609.7"	""	"648.5"	""	"615.7"	"821.8"	""	"554"	"30"	"34.000"	"27.000"	"0.0286734380170178"	""	"0.0001991"	"0.005994"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"554.78979"	"1108.57231"	"1108.57371"	"-1.26"	"-0.00070"	"6/56"	"6"	"56"	"9031396.70074463"	"HCD"	"MS2"	"0"	"411.4"	"100.000"	"66.5794"	"22084"	"22084"	"22076"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"688.5"	""	"524.5"	""	"613.1"	""	"682.2"	""	"591.4"	"795.5"	""	"554"	"31"	"34.000"	"27.000"	"0.0229868662601495"	""	"0.0001991"	"0.003449"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"554.79004"	"1108.57280"	"1108.57371"	"-0.82"	"-0.00045"	"6/56"	"6"	"56"	"5327010.47180176"	"HCD"	"MS2"	"0.7600846"	"267.9"	"100.000"	"66.8994"	"22179"	"22179"	"22164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"438.2"	""	"350.2"	""	"403.7"	""	"418.6"	""	"405.6"	"517.3"	""	"544"	"28"	"34.000"	"27.000"	"0.0480362287226637"	""	"0.0001991"	"0.003357"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"554.79016"	"1108.57305"	"1108.57371"	"-0.60"	"-0.00033"	"6/56"	"6"	"56"	"5846640.22497559"	"HCD"	"MS2"	"0"	"257.1"	"100.000"	"66.8799"	"22204"	"22204"	"22187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"420.0"	""	"320.4"	""	"393.0"	""	"401.9"	""	"383.3"	"513.8"	""	"544"	"29"	"34.000"	"27.000"	"0.0366074016303218"	"27"	"0.0001991"	"0.003456"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"554.79034"	"1108.57341"	"1108.57371"	"-0.27"	"-0.00015"	"5/56"	"5"	"56"	"934081.914672852"	"HCD"	"MS2"	"14.50961"	"62.6"	"100.000"	"67.1792"	"22324"	"22324"	"22309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.7"	""	"83.4"	""	"87.1"	""	"98.1"	"4.1"	"95.3"	"127.0"	""	"542"	"16"	"34.000"	"27.000"	"0.639689601191937"	"19"	"0.001718"	"0.01496"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAWGAFR"	"[R].dGAWGAFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"554.79047"	"1108.57366"	"1108.57371"	"-0.05"	"-0.00003"	"6/56"	"6"	"56"	"1305967.70562744"	"HCD"	"MS2"	"0"	"76.5"	"100.000"	"66.3089"	"21977"	"21977"	"21953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.7"	""	"107.9"	""	"115.6"	""	"124.5"	"0.0"	"116.9"	"147.6"	""	"540"	"29"	"34.000"	"27.000"	"0.0314314027940832"	"22"	"0.0001686"	"0.001961"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLNNR"	"[R].aEYLNNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"554.80084"	"1108.59441"	"1108.59484"	"-0.39"	"-0.00022"	"5/52"	"5"	"52"	"4679856.67132568"	"HCD"	"MS2"	"38.25311"	"308.5"	"100.000"	"33.0903"	"8462"	"8462"	"8434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"518.9"	""	"438.0"	""	"402.0"	""	"441.9"	"0.8"	"567.8"	"551.4"	""	"610"	"22"	"34.000"	"27.000"	"0.184204331959796"	"20"	"0.004234"	"0.04791"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEYLNNR"	"[R].aEYLNNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"554.80164"	"1108.59599"	"1108.59484"	"1.04"	"0.00058"	"4/52"	"4"	"52"	"4964055.12738037"	"HCD"	"MS2"	"41.59483"	"310.8"	"100.000"	"32.9931"	"8460"	"8460"	"8431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"545.1"	""	"441.5"	""	"419.9"	""	"444.5"	""	"541.1"	"550.8"	""	"627"	"22"	"34.000"	"27.000"	"0.205701540985961"	"19"	"0.004852"	"0.05948"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"370.20657"	"1108.60517"	"1108.60607"	"-0.82"	"-0.00030"	"6/54"	"6"	"54"	"3618904.49761963"	"HCD"	"MS2"	"15.13901"	"139.9"	"89.978"	"18.9568"	"2927"	"2927"	"2904"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.7"	""	"181.8"	""	"188.1"	""	"290.5"	"2.6"	"252.0"	"242.0"	""	"666"	"20"	"35.000"	"28.000"	"0.315823348279198"	"19"	"0.004213"	"0.0477"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"554.80634"	"1108.60539"	"1108.60607"	"-0.61"	"-0.00034"	"5/54"	"5"	"54"	"318865.446594238"	"HCD"	"MS2"	"8.920745"	"30.7"	"100.000"	"18.9973"	"2904"	"2904"	"2875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"31.8"	""	"31.5"	""	"62.1"	""	"58.7"	"61.5"	""	"670"	"24"	"35.000"	"28.000"	"0.119686400780896"	"22"	"0.003568"	"0.03971"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHENNPR"	"[K].lHENNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"370.20679"	"1108.60581"	"1108.60607"	"-0.24"	"-0.00009"	"6/54"	"6"	"54"	"3653953.49945068"	"HCD"	"MS2"	"13.15393"	"149.3"	"92.089"	"18.9790"	"2896"	"2896"	"2875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.2"	""	"178.9"	""	"194.2"	""	"320.5"	"0.1"	"273.4"	"261.3"	""	"645"	"22"	"35.000"	"28.000"	"0.221069953030983"	"17"	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSDFLR"	"[K].eLSDFLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"554.81329"	"1108.61931"	"1108.61999"	"-0.61"	"-0.00034"	"4/54"	"4"	"54"	"660312.157348633"	"HCD"	"MS2"	"22.214"	"35.1"	"100.000"	"97.5204"	"34560"	"34560"	"34537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"44.4"	""	"53.1"	""	"55.9"	"1.4"	"67.6"	"66.5"	""	"620"	"12"	"34.000"	"27.000"	"2.12012610657243"	"21"	"0.003818"	"0.04173"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLESFLR"	"[R].dLESFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"554.81342"	"1108.61955"	"1108.61999"	"-0.39"	"-0.00022"	"5/54"	"5"	"54"	"385054.878479004"	"HCD"	"MS2"	"4.371766"	"22.4"	"100.000"	"101.0488"	"35990"	"35990"	"35972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"22.0"	""	"29.0"	""	"45.0"	""	"42.1"	"44.7"	""	"620"	"31"	"34.000"	"27.000"	"0.0227699299128706"	""	"0.001615"	"0.01313"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLESFLR"	"[R].dLESFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"554.81342"	"1108.61955"	"1108.61999"	"-0.39"	"-0.00022"	"5/54"	"5"	"54"	"561081.894470215"	"HCD"	"MS2"	"24.47362"	"30.7"	"100.000"	"100.7462"	"35868"	"35868"	"35851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.0"	""	"35.8"	""	"44.2"	""	"51.7"	""	"56.9"	"62.5"	""	"620"	"24"	"34.000"	"27.000"	"0.12256365222112"	"26"	"0.004114"	"0.04483"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLESFLR"	"[R].dLESFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"554.81348"	"1108.61968"	"1108.61999"	"-0.28"	"-0.00016"	"5/54"	"5"	"54"	"393895.701416016"	"HCD"	"MS2"	"2.976006"	"24.0"	"100.000"	"101.1609"	"36062"	"36062"	"36047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.2"	""	"32.4"	""	"34.9"	""	"39.0"	""	"41.1"	"48.2"	""	"620"	"27"	"34.000"	"27.000"	"0.0573273271883205"	""	"0.003001"	"0.03243"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLESFLR"	"[R].dLESFLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"554.81348"	"1108.61968"	"1108.61999"	"-0.28"	"-0.00016"	"5/54"	"5"	"54"	"552789.060913086"	"HCD"	"MS2"	"36.08992"	"30.2"	"100.000"	"100.8607"	"35942"	"35942"	"35921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.9"	""	"39.3"	""	"38.9"	""	"51.9"	"0.0"	"60.4"	"62.6"	""	"620"	"27"	"34.000"	"27.000"	"0.0600290808823448"	""	"0.001261"	"0.009734"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGSGTGK"	"[K].sGGSGTGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BN18"	"Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1"	"B0BN18"	"Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"554.82111"	"1108.63494"	"1108.63626"	"-1.19"	"-0.00066"	"6/66"	"6"	"66"	"1284986.31011963"	"HCD"	"MS2"	"0"	"105.8"	"100.000"	"19.9858"	"3275"	"3275"	"3267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.4"	""	"112.4"	""	"133.2"	""	"185.9"	""	"207.7"	"236.9"	""	"532"	"27"	"34.000"	"27.000"	"0.0551926995643006"	"19"	"9.9E-05"	"0.001019"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGSGTGK"	"[K].sGGSGTGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BN18"	"Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1"	"B0BN18"	"Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"554.82111"	"1108.63494"	"1108.63626"	"-1.19"	"-0.00066"	"7/66"	"7"	"66"	"1110821.2855835"	"HCD"	"MS2"	"0"	"88.5"	"100.000"	"19.9551"	"3301"	"3301"	"3294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.5"	""	"100.3"	""	"98.1"	""	"164.6"	""	"175.3"	"186.0"	""	"532"	"27"	"34.000"	"27.000"	"0.0571322906118722"	"24"	"0.0001686"	"0.001658"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVATCVGR"	"[K].eVATcVGR.[N]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"555.28479"	"1109.56230"	"1109.56447"	"-1.95"	"-0.00108"	"7/62"	"7"	"62"	"5075229.57250977"	"HCD"	"MS2"	"49.22775"	"253.6"	"100.000"	"45.5998"	"13571"	"13571"	"13544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"378.6"	""	"323.4"	""	"319.2"	""	"429.8"	""	"467.3"	"490.6"	""	"544"	"13"	"34.000"	"27.000"	"1.46072648612709"	"17"	"0.001261"	"0.009994"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAMGAFDR"	"[K].iAMGAFDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"555.30243"	"1109.59758"	"1109.59748"	"0.09"	"0.00005"	"7/56"	"7"	"56"	"873896.34197998"	"HCD"	"MS2"	"51.91531"	"54.9"	"100.000"	"72.6901"	"24528"	"24528"	"24509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.5"	""	"60.0"	""	"74.3"	""	"80.2"	""	"114.2"	"125.7"	""	"662"	"16"	"35.000"	"28.000"	"0.888849011512967"	"23"	"0.003317"	"0.03687"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASFLTR"	"[K].dAASFLTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"555.31030"	"1109.61333"	"1109.61524"	"-1.72"	"-0.00096"	"6/68"	"6"	"68"	"883031.39453125"	"HCD"	"MS2"	"54.19286"	"55.3"	"100.000"	"62.6942"	"20507"	"20507"	"20483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"62.6"	""	"72.2"	""	"89.1"	"1.0"	"117.1"	"114.2"	""	"527"	"40"	"34.000"	"27.000"	"0.00245346925185773"	"27"	"0.0001991"	"0.003536"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDTFGR"	"[K].tALDTFGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"555.31049"	"1109.61370"	"1109.61524"	"-1.39"	"-0.00077"	"6/64"	"6"	"64"	"6896760.80847168"	"HCD"	"MS2"	"0"	"333.0"	"100.000"	"55.5819"	"17624"	"17624"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"469.0"	""	"457.8"	""	"442.5"	""	"552.3"	""	"591.2"	"643.5"	""	"527"	"38"	"34.000"	"27.000"	"0.00444406722189933"	"19"	"0.0001991"	"0.003204"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDTFGR"	"[K].tALDTFGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"555.31061"	"1109.61394"	"1109.61524"	"-1.17"	"-0.00065"	"6/64"	"6"	"64"	"2549170.57733154"	"HCD"	"MS2"	"16.93504"	"139.2"	"100.000"	"56.1654"	"17824"	"17824"	"17816"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.5"	""	"195.2"	""	"194.2"	""	"220.2"	""	"259.3"	"264.3"	""	"527"	"39"	"34.000"	"27.000"	"0.00313170336929654"	"18"	"0.0001686"	"0.0017"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALDTFGR"	"[K].tALDTFGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"555.31073"	"1109.61418"	"1109.61524"	"-0.95"	"-0.00053"	"6/64"	"6"	"64"	"6932492.28985596"	"HCD"	"MS2"	"0"	"338.3"	"100.000"	"55.9044"	"17722"	"17722"	"17709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"472.1"	""	"475.0"	""	"445.4"	""	"559.1"	""	"589.9"	"667.1"	""	"529"	"32"	"34.000"	"27.000"	"0.0165358177239169"	"21"	"0.0001991"	"0.004605"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"555.31079"	"1109.61431"	"1109.61524"	"-0.84"	"-0.00047"	"5/66"	"5"	"66"	"36316632.7250977"	"HCD"	"MS2"	"0"	"473.6"	"28.817"	"54.3740"	"17099"	"17099"	"17082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"710.2"	""	"657.6"	""	"661.4"	""	"782.7"	""	"784.0"	"893.9"	""	"529"	"36"	"34.000"	"27.000"	"0.00661341348168705"	""	"0.001261"	"0.01013"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASFLTR"	"[K].dAASFLTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"555.31091"	"1109.61455"	"1109.61524"	"-0.62"	"-0.00034"	"5/68"	"5"	"68"	"2437321.5869751"	"HCD"	"MS2"	"20.22583"	"111.4"	"100.000"	"62.9868"	"20625"	"20625"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.8"	""	"121.2"	""	"147.4"	""	"196.8"	""	"238.6"	"224.5"	""	"525"	"29"	"34.000"	"27.000"	"0.0368238597447514"	"25"	"0.0001686"	"0.001517"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVYSR"	"[K].iENVYSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"555.31104"	"1109.61479"	"1109.61524"	"-0.40"	"-0.00022"	"5/64"	"5"	"64"	"5043043.93798828"	"HCD"	"MS2"	"7.923177"	"268.1"	"100.000"	"44.0763"	"12916"	"12916"	"12897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"402.3"	""	"349.5"	""	"380.2"	""	"437.9"	"1.5"	"483.8"	"483.8"	""	"525"	"28"	"34.000"	"27.000"	"0.0386482031888589"	"20"	"0.005832"	"0.07188"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNLTYR"	"[K].vDNLTYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"555.31104"	"1109.61479"	"1109.61524"	"-0.40"	"-0.00022"	"6/62"	"6"	"62"	"4777368.20367432"	"HCD"	"MS2"	"46.78811"	"246.9"	"100.000"	"45.8957"	"13657"	"13657"	"13637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.7"	""	"335.5"	""	"326.1"	""	"402.8"	""	"457.6"	"457.0"	""	"525"	"17"	"34.000"	"27.000"	"0.58093736127148"	"15"	"0.006577"	"0.08205"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYSLDGR"	"[K].vAYSLDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"555.31122"	"1109.61516"	"1109.61524"	"-0.07"	"-0.00004"	"6/60"	"6"	"60"	"1976538.88592529"	"HCD"	"MS2"	"28.10605"	"135.1"	"100.000"	"49.7452"	"15250"	"15250"	"15228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.3"	""	"172.0"	""	"165.0"	""	"202.5"	""	"269.1"	"303.8"	""	"539"	"27"	"34.000"	"27.000"	"0.0561770292994719"	"22"	"0.0001991"	"0.002302"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAYSLDGR"	"[K].vAYSLDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"555.31122"	"1109.61516"	"1109.61524"	"-0.07"	"-0.00004"	"6/60"	"6"	"60"	"2204294.92840576"	"HCD"	"MS2"	"13.29739"	"139.0"	"100.000"	"50.1053"	"15362"	"15362"	"15340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.2"	""	"185.4"	""	"164.7"	""	"208.6"	""	"288.7"	"299.7"	""	"539"	"38"	"34.000"	"27.000"	"0.00454526040342266"	"24"	"0.0001686"	"0.001446"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASFLTR"	"[K].dAASFLTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"555.31122"	"1109.61516"	"1109.61524"	"-0.07"	"-0.00004"	"5/68"	"5"	"68"	"2554787.04168701"	"HCD"	"MS2"	"18.57532"	"110.8"	"100.000"	"63.0761"	"20629"	"20629"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.2"	""	"118.4"	""	"128.8"	""	"211.0"	""	"238.6"	"243.7"	""	"539"	"28"	"34.000"	"27.000"	"0.0396788219405618"	"25"	"0.0001991"	"0.00291"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASFLTR"	"[K].dAASFLTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"555.31128"	"1109.61528"	"1109.61524"	"0.04"	"0.00002"	"6/68"	"6"	"68"	"1051711.55718994"	"HCD"	"MS2"	"32.52578"	"58.2"	"100.000"	"62.7858"	"20511"	"20511"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.8"	""	"66.4"	""	"80.0"	""	"108.2"	""	"113.7"	"121.9"	""	"539"	"38"	"34.000"	"27.000"	"0.00404165063167889"	"22"	"0"	"0.0002575"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENVYSR"	"[K].iENVYSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"555.31128"	"1109.61528"	"1109.61524"	"0.04"	"0.00002"	"5/64"	"5"	"64"	"5414216.88244629"	"HCD"	"MS2"	"14.3756"	"295.2"	"100.000"	"43.9024"	"12881"	"12881"	"12858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.5"	""	"384.7"	""	"442.1"	""	"464.8"	""	"527.0"	"540.0"	""	"539"	"34"	"34.000"	"27.000"	"0.0120381228084684"	"20"	"0.003317"	"0.03586"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDNLTYR"	"[K].vDNLTYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"555.31128"	"1109.61528"	"1109.61524"	"0.04"	"0.00002"	"5/62"	"5"	"62"	"5922696.73498535"	"HCD"	"MS2"	"41.77514"	"287.5"	"100.000"	"45.6274"	"13582"	"13582"	"13560"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"449.5"	""	"367.7"	""	"365.5"	""	"481.8"	""	"517.3"	"543.2"	""	"539"	"28"	"34.000"	"27.000"	"0.0414532675561668"	"16"	"0.00296"	"0.03149"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"555.31140"	"1109.61553"	"1109.61524"	"0.26"	"0.00014"	"5/66"	"5"	"66"	"10465499.4862671"	"HCD"	"MS2"	"25.92246"	"495.2"	"100.000"	"53.7919"	"16895"	"16895"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"751.9"	""	"748.9"	""	"683.9"	""	"799.6"	""	"834.6"	"869.4"	""	"542"	"36"	"34.000"	"27.000"	"0.00709527595227345"	"27"	"0.0005161"	"0.006708"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"555.31165"	"1109.61601"	"1109.61524"	"0.70"	"0.00039"	"5/66"	"5"	"66"	"9551540.68023682"	"HCD"	"MS2"	"32.89249"	"451.5"	"100.000"	"54.0886"	"16982"	"16982"	"16961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"715.4"	""	"659.6"	""	"610.1"	""	"754.2"	""	"738.9"	"797.9"	""	"537"	"31"	"34.000"	"27.000"	"0.0191842263551275"	""	"0.0001991"	"0.005458"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGFTLR"	"[R].tDAGFTLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"555.31171"	"1109.61614"	"1109.61524"	"0.81"	"0.00045"	"5/66"	"5"	"66"	"34566874.6037598"	"HCD"	"MS2"	"0.2366004"	"557.0"	"35.348"	"54.0887"	"17016"	"17016"	"16999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"848.2"	""	"823.0"	""	"796.9"	""	"856.3"	""	"922.3"	"1029.0"	""	"537"	"36"	"34.000"	"27.000"	"0.00696537158728902"	""	"0.001103"	"0.00907"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDFGLSR"	"[K].vSDFGLSR.[VYA]"	"N-Term(TMT6plex)"	"1"	"6"	"P54758"	"Ephrin type-A receptor 6 OS=Rattus norvegicus OX=10116 GN=Epha6 PE=2 SV=2"	"P54759; P09759; P54757; P29321; O08680; P54758"	"Ephrin type-A receptor 7 OS=Rattus norvegicus OX=10116 GN=Epha7 PE=1 SV=1; Ephrin type-B receptor 1 OS=Rattus norvegicus OX=10116 GN=Ephb1 PE=1 SV=2; Ephrin type-A receptor 5 OS=Rattus norvegicus OX=10116 GN=Epha5 PE=1 SV=1; Ephrin type-A receptor 8 (Fragment) OS=Rattus norvegicus OX=10116 GN=Epha8 PE=2 SV=1; Ephrin type-A receptor 3 OS=Rattus norvegicus OX=10116 GN=Epha3 PE=2 SV=1; Ephrin type-A receptor 6 OS=Rattus norvegicus OX=10116 GN=Epha6 PE=2 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"555.31177"	"1109.61626"	"1109.61524"	"0.92"	"0.00051"	"6/66"	"6"	"66"	"1360531.89489746"	"HCD"	"MS2"	"30.71979"	"87.8"	"100.000"	"64.4158"	"21205"	"21205"	"21179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.4"	""	"117.5"	""	"117.6"	""	"152.8"	"1.2"	"159.8"	"156.5"	""	"537"	"19"	"34.000"	"27.000"	"0.364707160408651"	"25"	"0.002035"	"0.01774"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHVLGLAR"	"[R].dHVLGLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"370.55862"	"1109.66132"	"1109.66286"	"-1.39"	"-0.00051"	"6/56"	"6"	"56"	"20602726.6403809"	"HCD"	"MS2"	"1.153879"	"101.3"	"28.956"	"36.5963"	"9880"	"9880"	"9863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.7"	""	"152.8"	""	"112.5"	""	"172.4"	""	"144.2"	"149.3"	""	"281"	"20"	"31.000"	"24.000"	"0.148482860044519"	"20"	"0.002559"	"0.02576"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHVLGLAR"	"[R].dHVLGLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"370.55869"	"1109.66150"	"1109.66286"	"-1.22"	"-0.00045"	"7/56"	"7"	"56"	"8019843.8034668"	"HCD"	"MS2"	"29.83937"	"152.5"	"100.000"	"36.3052"	"9764"	"9764"	"9746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.2"	""	"205.3"	""	"178.5"	""	"264.8"	"0.2"	"262.1"	"226.7"	""	"281"	"22"	"31.000"	"24.000"	"0.0896760198097721"	""	"0.002628"	"0.02789"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHVLGLAR"	"[R].dHVLGLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"370.55884"	"1109.66196"	"1109.66286"	"-0.81"	"-0.00030"	"9/56"	"9"	"56"	"8083400.24743652"	"HCD"	"MS2"	"18.81901"	"144.1"	"100.000"	"36.1930"	"9756"	"9756"	"9743"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.4"	""	"204.4"	""	"174.5"	""	"245.6"	""	"239.2"	"217.8"	""	"281"	"22"	"31.000"	"24.000"	"0.0913432214932042"	""	"0.0005161"	"0.006741"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHVLGLAR"	"[R].dHVLGLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.5152"	"0.0000"	"1"	"1"	"1"	"370.55890"	"1109.66214"	"1109.66286"	"-0.64"	"-0.00024"	"9/56"	"9"	"56"	"21207873.3864746"	"HCD"	"MS2"	"2.279897"	"179.8"	"51.420"	"36.4820"	"9871"	"9871"	"9860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"374.2"	""	"260.1"	""	"215.6"	""	"301.4"	""	"289.8"	"258.4"	""	"281"	"33"	"31.000"	"24.000"	"0.00630487272856051"	""	"0.0001991"	"0.005799"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHVLGLAR"	"[R].dHVLGLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"555.33484"	"1109.66240"	"1109.66286"	"-0.41"	"-0.00023"	"6/56"	"6"	"56"	"3557918.81311035"	"HCD"	"MS2"	"10.41132"	"190.5"	"100.000"	"36.3785"	"9793"	"9793"	"9777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.6"	""	"270.6"	""	"220.6"	""	"316.6"	"1.0"	"339.5"	"308.0"	""	"281"	"40"	"31.000"	"24.000"	"0.00140176858967069"	"22"	"0.0003938"	"0.006219"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHVLGLAR"	"[R].dHVLGLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"555.33502"	"1109.66277"	"1109.66286"	"-0.08"	"-0.00005"	"6/56"	"6"	"56"	"3693016.91589355"	"HCD"	"MS2"	"15.22849"	"185.0"	"100.000"	"36.2663"	"9785"	"9785"	"9773"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"353.9"	""	"227.3"	""	"226.1"	""	"303.0"	"1.0"	"335.8"	"303.1"	""	"223"	"43"	"30.000"	"23.000"	"0.000552426962747341"	"21"	"9.9E-05"	"0.0008326"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVPLPER"	"[R].lGVPLPER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV22"	"Phosphatidylserine synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptdss2 PE=1 SV=1"	"B2GV22"	"Phosphatidylserine synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptdss2 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"555.34723"	"1109.68718"	"1109.68801"	"-0.75"	"-0.00041"	"6/56"	"6"	"56"	"500568.614318848"	"HCD"	"MS2"	"30.09039"	"31.4"	"100.000"	"76.4641"	"26093"	"26093"	"26074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"39.7"	""	"43.6"	""	"54.0"	"0.9"	"57.8"	"64.9"	""	"134"	"20"	"28.000"	"21.000"	"0.065928744085996"	""	"0.001488"	"0.01282"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVPLPER"	"[R].lGVPLPER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B2GV22"	"Phosphatidylserine synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptdss2 PE=1 SV=1"	"B2GV22"	"Phosphatidylserine synthase 2 OS=Rattus norvegicus OX=10116 GN=Ptdss2 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"555.34772"	"1109.68816"	"1109.68801"	"0.13"	"0.00007"	"6/56"	"6"	"56"	"483008.598449707"	"HCD"	"MS2"	"29.53083"	"28.4"	"100.000"	"76.3779"	"26027"	"26027"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.5"	""	"25.2"	""	"38.3"	""	"45.2"	"0.8"	"59.9"	"68.6"	""	"134"	"21"	"28.000"	"21.000"	"0.0576865813963683"	""	"0.001488"	"0.01266"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHIQQLR"	"[K].sHIQQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"555.83234"	"1110.65740"	"1110.65811"	"-0.64"	"-0.00036"	"6/54"	"6"	"54"	"624903.491088867"	"HCD"	"MS2"	"0"	"55.1"	"100.000"	"21.4155"	"3881"	"3881"	"3857"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.7"	""	"66.2"	""	"65.3"	""	"100.7"	""	"108.4"	"115.0"	""	"232"	"9"	"30.000"	"23.000"	"1.32573886835614"	"15"	"0.002588"	"0.02642"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHIQQLR"	"[K].sHIQQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"370.89069"	"1110.65750"	"1110.65811"	"-0.54"	"-0.00020"	"5/54"	"5"	"54"	"3445523.82519531"	"HCD"	"MS2"	"26.98031"	"128.1"	"100.000"	"21.3811"	"3867"	"3867"	"3843"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.0"	""	"155.6"	""	"173.2"	""	"243.2"	"7.2"	"240.8"	"226.9"	""	"232"	"16"	"30.000"	"23.000"	"0.275079349856752"	"14"	"0.004314"	"0.05059"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHIQQLR"	"[K].sHIQQLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"370.89069"	"1110.65750"	"1110.65811"	"-0.54"	"-0.00020"	"5/54"	"5"	"54"	"4207552.98748779"	"HCD"	"MS2"	"26.27574"	"133.3"	"100.000"	"21.4022"	"3838"	"3838"	"3817"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.6"	""	"165.5"	""	"168.8"	""	"269.0"	"4.4"	"256.5"	"239.6"	""	"232"	"19"	"30.000"	"23.000"	"0.158291643844315"	"14"	"0.002525"	"0.0237"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLQLHR"	"[R].nTLQLHR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.83282"	"1110.65837"	"1110.65811"	"0.24"	"0.00013"	"5/60"	"5"	"60"	"908286.311096191"	"HCD"	"MS2"	"0"	"73.8"	"100.000"	"26.5250"	"5845"	"5845"	"5828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.6"	""	"99.5"	""	"101.7"	""	"126.1"	""	"137.9"	"141.1"	""	"178"	"17"	"29.000"	"22.000"	"0.161209268243145"	"14"	"0.001453"	"0.01193"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDSTGSR"	"[K].fLDSTGSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"556.30115"	"1111.59502"	"1111.59450"	"0.46"	"0.00026"	"6/64"	"6"	"64"	"1235856.44482422"	"HCD"	"MS2"	"23.77092"	"87.2"	"100.000"	"44.5630"	"13115"	"13115"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.7"	""	"117.2"	""	"120.9"	""	"144.0"	"0.7"	"153.6"	"160.8"	""	"458"	"17"	"33.000"	"26.000"	"0.499845149812047"	"23"	"0.001348"	"0.01132"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLDSTGSR"	"[K].fLDSTGSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"556.30231"	"1111.59734"	"1111.59450"	"2.55"	"0.00142"	"6/64"	"6"	"64"	"1447982.20629883"	"HCD"	"MS2"	"27.12666"	"105.9"	"100.000"	"44.4280"	"13095"	"13095"	"13077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.6"	""	"150.4"	""	"146.5"	""	"173.4"	"1.4"	"184.0"	"183.7"	""	"422"	"24"	"33.000"	"26.000"	"0.0889779622234309"	""	"0.0001991"	"0.00524"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFVLHPR"	"[K].dFVLHPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"0.6757"	"0.0000"	"1"	"1"	"1"	"371.55142"	"1112.63971"	"1112.64139"	"-1.51"	"-0.00056"	"6/48"	"6"	"48"	"4486787.65625"	"HCD"	"MS2"	"34.60143"	"67.5"	"100.000"	"42.9755"	"12468"	"12468"	"12441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.8"	""	"75.9"	""	"84.4"	""	"131.6"	"0.2"	"139.7"	"127.8"	""	"331"	"37"	"32.000"	"25.000"	"0.00326435962827009"	""	"0.0007633"	"0.007443"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFVLHPR"	"[K].dFVLHPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"371.55167"	"1112.64045"	"1112.64139"	"-0.85"	"-0.00032"	"6/48"	"6"	"48"	"4406928.234375"	"HCD"	"MS2"	"27.84373"	"66.5"	"100.000"	"42.8076"	"12433"	"12433"	"12414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.6"	""	"75.1"	""	"85.7"	""	"128.2"	""	"134.5"	"130.5"	""	"370"	"34"	"32.000"	"25.000"	"0.00693700054154145"	"25"	"0.0007633"	"0.007397"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLIAR"	"[R].mQHLIAR.[E]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"557.32330"	"1113.63933"	"1113.64001"	"-0.61"	"-0.00034"	"6/60"	"6"	"60"	"4208638.96990967"	"HCD"	"MS2"	"5.172591"	"139.1"	"100.000"	"21.5238"	"3888"	"3888"	"3865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.5"	""	"144.2"	""	"184.2"	""	"379.1"	"0.3"	"226.0"	"230.4"	""	"361"	"14"	"32.000"	"25.000"	"0.694188166591864"	"18"	"0.004634"	"0.05438"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQHLIAR"	"[R].mQHLIAR.[E]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"557.32336"	"1113.63945"	"1113.64001"	"-0.51"	"-0.00028"	"6/60"	"6"	"60"	"4428863.43084717"	"HCD"	"MS2"	"0"	"151.2"	"100.000"	"21.4774"	"3906"	"3906"	"3883"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.7"	""	"172.8"	""	"186.8"	""	"381.0"	"0.3"	"255.9"	"251.5"	""	"361"	"14"	"32.000"	"25.000"	"0.705467816905287"	"18"	"0.009514"	"0.1265"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPEGTR"	"[K].iLVPEGTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"557.34424"	"1113.68120"	"1113.68292"	"-1.55"	"-0.00086"	"5/60"	"5"	"60"	"8511397.41186523"	"HCD"	"MS2"	"7.296063"	"351.9"	"100.000"	"55.8540"	"17702"	"17702"	"17690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"493.3"	""	"399.8"	""	"437.5"	""	"606.5"	""	"684.6"	"718.8"	""	"286"	"30"	"31.000"	"24.000"	"0.0153580485964798"	""	"0.0001991"	"0.003038"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPEGTR"	"[K].iLVPEGTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"557.34436"	"1113.68144"	"1113.68292"	"-1.33"	"-0.00074"	"5/60"	"5"	"60"	"8503642.59173584"	"HCD"	"MS2"	"10.4703"	"340.4"	"100.000"	"55.5316"	"17605"	"17605"	"17591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"475.2"	""	"388.7"	""	"420.4"	""	"587.2"	""	"659.6"	"698.4"	""	"286"	"30"	"31.000"	"24.000"	"0.0153934525549066"	""	"0.0001991"	"0.004024"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLVADPR"	"[R].tLLVADPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"557.34460"	"1113.68193"	"1113.68292"	"-0.89"	"-0.00050"	"4/66"	"4"	"66"	"2455117.67248535"	"HCD"	"MS2"	"31.34245"	"73.7"	"100.000"	"59.3181"	"19104"	"19104"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.0"	""	"94.8"	""	"104.5"	""	"140.2"	""	"138.2"	"128.1"	""	"286"	"24"	"31.000"	"24.000"	"0.051207790505677"	""	"0.008364"	"0.1066"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLVADPR"	"[R].tLLVADPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"557.34473"	"1113.68218"	"1113.68292"	"-0.67"	"-0.00037"	"5/66"	"5"	"66"	"9552451.66821289"	"HCD"	"MS2"	"6.698652"	"208.2"	"100.000"	"59.6058"	"19222"	"19222"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.6"	""	"318.1"	""	"356.2"	""	"340.6"	""	"350.0"	"310.3"	""	"286"	"41"	"31.000"	"24.000"	"0.00101703532452426"	""	"0.004234"	"0.04935"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLVADPR"	"[R].tLLVADPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"557.34479"	"1113.68230"	"1113.68292"	"-0.56"	"-0.00031"	"4/66"	"4"	"66"	"3195162.3314209"	"HCD"	"MS2"	"25.20578"	"86.6"	"100.000"	"59.1637"	"19076"	"19076"	"19057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.4"	"2.6"	"121.2"	""	"125.1"	""	"156.8"	""	"146.5"	"145.0"	""	"286"	"25"	"31.000"	"24.000"	"0.0464874835261171"	""	"0.005673"	"0.07081"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVEPSR"	"[K].aLIVEPSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"557.34479"	"1113.68230"	"1113.68292"	"-0.56"	"-0.00031"	"6/60"	"6"	"60"	"2857450.04058838"	"HCD"	"MS2"	"0"	"115.6"	"100.000"	"52.5605"	"16358"	"16358"	"16339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.2"	""	"148.9"	""	"167.3"	""	"170.2"	""	"225.5"	"212.0"	""	"286"	"31"	"31.000"	"24.000"	"0.010922851705161"	"20"	"9.9E-05"	"0.0009944"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPEGTR"	"[K].iLVPEGTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"557.34479"	"1113.68230"	"1113.68292"	"-0.56"	"-0.00031"	"5/60"	"5"	"60"	"2504832.16894531"	"HCD"	"MS2"	"32.05561"	"120.1"	"100.000"	"55.2404"	"17486"	"17486"	"17458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.2"	""	"144.6"	""	"154.1"	""	"219.1"	""	"226.5"	"215.9"	""	"286"	"28"	"31.000"	"24.000"	"0.0251383076796093"	""	"0.0001686"	"0.00143"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILVPEGTR"	"[K].iLVPEGTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"557.34497"	"1113.68266"	"1113.68292"	"-0.23"	"-0.00013"	"5/60"	"5"	"60"	"2163527.16516113"	"HCD"	"MS2"	"32.25457"	"104.3"	"100.000"	"55.5579"	"17581"	"17581"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.2"	""	"121.7"	""	"129.5"	""	"182.2"	""	"198.1"	"197.8"	""	"286"	"29"	"31.000"	"24.000"	"0.0178375842536741"	""	"0.001217"	"0.009485"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVEPSR"	"[K].aLIVEPSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"557.34503"	"1113.68279"	"1113.68292"	"-0.12"	"-0.00007"	"5/60"	"5"	"60"	"2880580.8848877"	"HCD"	"MS2"	"0"	"117.5"	"100.000"	"52.1760"	"16236"	"16236"	"16219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.6"	""	"157.1"	""	"167.8"	""	"187.7"	""	"213.1"	"208.9"	""	"286"	"27"	"31.000"	"24.000"	"0.0289958628891543"	"20"	"0.0001686"	"0.001341"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLVADPR"	"[R].tLLVADPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"557.34528"	"1113.68328"	"1113.68292"	"0.31"	"0.00018"	"5/66"	"5"	"66"	"9341104.32250977"	"HCD"	"MS2"	"7.552446"	"204.4"	"100.000"	"59.4285"	"19184"	"19184"	"19176"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.6"	""	"319.4"	""	"334.3"	""	"344.4"	"0.4"	"340.8"	"289.7"	""	"310"	"42"	"31.000"	"24.000"	"0.00109227425689908"	""	"0.001615"	"0.01319"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIVEPSR"	"[K].aLIVEPSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"557.34540"	"1113.68352"	"1113.68292"	"0.53"	"0.00030"	"5/60"	"5"	"60"	"1050474.30114746"	"HCD"	"MS2"	"22.48029"	"51.8"	"100.000"	"52.2585"	"16235"	"16235"	"16211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.7"	""	"77.4"	""	"70.2"	""	"74.0"	"0.3"	"93.7"	"96.1"	""	"310"	"29"	"31.000"	"24.000"	"0.0185922391988154"	"20"	"0.0001991"	"0.003389"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLSGPNR"	"[K].eLLSGPNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"557.82397"	"1114.64067"	"1114.64179"	"-1.00"	"-0.00056"	"5/64"	"5"	"64"	"4334212.00750732"	"HCD"	"MS2"	"19.82711"	"212.6"	"100.000"	"41.2093"	"11786"	"11786"	"11766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"357.3"	""	"265.4"	""	"273.6"	""	"324.2"	""	"370.8"	"422.3"	""	"509"	"26"	"34.000"	"27.000"	"0.0621853075660616"	""	"0.001615"	"0.01387"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLSGPNR"	"[K].eLLSGPNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"557.82397"	"1114.64067"	"1114.64179"	"-1.00"	"-0.00056"	"5/64"	"5"	"64"	"4930813.7588501"	"HCD"	"MS2"	"19.88306"	"235.0"	"100.000"	"41.3096"	"11789"	"11789"	"11774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.6"	""	"285.0"	""	"297.2"	""	"367.4"	""	"391.8"	"498.6"	""	"509"	"26"	"34.000"	"27.000"	"0.0623286595049488"	""	"0.001348"	"0.01124"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLLDVR"	"[R].aAQLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"557.84186"	"1114.67644"	"1114.67817"	"-1.56"	"-0.00087"	"5/66"	"5"	"66"	"857204.179870605"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"66.5518"	"22073"	"22073"	"22056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.1"	""	"57.9"	""	"55.0"	""	"74.9"	""	"76.9"	"84.6"	""	"393"	"37"	"32.000"	"25.000"	"0.00399358152648967"	""	"0.0001686"	"0.001961"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENQLLR"	"[R].lENQLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"557.84198"	"1114.67668"	"1114.67817"	"-1.34"	"-0.00075"	"6/56"	"6"	"56"	"768294.008178711"	"HCD"	"MS2"	"44.2318"	"40.1"	"100.000"	"63.2002"	"20680"	"20680"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"45.8"	""	"51.1"	""	"80.4"	"1.8"	"71.1"	"77.0"	""	"392"	"10"	"32.000"	"25.000"	"2.14909726444064"	"19"	"0.007717"	"0.09834"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLLDVR"	"[R].aAQLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"557.84222"	"1114.67717"	"1114.67817"	"-0.90"	"-0.00050"	"7/66"	"7"	"66"	"1027309.86730957"	"HCD"	"MS2"	"9.54901"	"49.7"	"100.000"	"66.8591"	"22195"	"22195"	"22175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.4"	""	"56.9"	""	"65.8"	""	"82.3"	""	"95.6"	"105.2"	""	"392"	"26"	"32.000"	"25.000"	"0.0501482833833506"	"21"	"0.001217"	"0.00951"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLLDVR"	"[R].aAQLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"557.84222"	"1114.67717"	"1114.67817"	"-0.90"	"-0.00050"	"5/66"	"5"	"66"	"1086800.6817627"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"66.7753"	"22129"	"22129"	"22107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.0"	""	"58.0"	""	"67.2"	""	"79.8"	""	"96.4"	"104.1"	""	"392"	"33"	"32.000"	"25.000"	"0.0101217608377326"	""	"0.002508"	"0.0235"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQLLDVR"	"[R].aAQLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"Q9Z2X5"	"Homer protein homolog 3 OS=Rattus norvegicus OX=10116 GN=Homer3 PE=1 SV=2"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"557.84271"	"1114.67815"	"1114.67817"	"-0.02"	"-0.00001"	"5/66"	"5"	"66"	"548898.915283203"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"66.4635"	"22005"	"22005"	"21984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"33.7"	""	"42.0"	""	"46.7"	"0.9"	"58.4"	"59.1"	""	"392"	"36"	"32.000"	"25.000"	"0.00542320562500656"	""	"0.0001991"	"0.003632"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25934"	"1115.51140"	"1115.51281"	"-1.26"	"-0.00070"	"5/58"	"5"	"58"	"260880.984008789"	"HCD"	"MS2"	"39.76035"	"17.8"	"100.000"	"97.6519"	"34614"	"34614"	"34583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"23.0"	""	"26.9"	""	"32.2"	""	"28.7"	"37.7"	""	"144"	"15"	"28.000"	"21.000"	"0.218440165261988"	"13"	"0.002834"	"0.03023"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.25983"	"1115.51238"	"1115.51281"	"-0.39"	"-0.00022"	"5/58"	"5"	"58"	"930282.962524414"	"HCD"	"MS2"	"54.06002"	"23.6"	"100.000"	"81.4677"	"28117"	"28117"	"28093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"31.9"	""	"28.6"	""	"49.0"	"1.1"	"43.7"	"45.1"	""	"141"	"20"	"28.000"	"21.000"	"0.0746773876249989"	"14"	"0.00511"	"0.06443"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEFESM"	"[R].iDEFESm.[-]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26013"	"1115.51299"	"1115.51281"	"0.16"	"0.00009"	"6/58"	"6"	"58"	"1152238.20770264"	"HCD"	"MS2"	"55.9543"	"29.9"	"100.000"	"81.3572"	"28045"	"28045"	"28027"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"39.8"	""	"35.8"	""	"55.4"	"2.3"	"57.4"	"59.8"	""	"141"	"31"	"28.000"	"21.000"	"0.00566485916140861"	"14"	"0.002189"	"0.0204"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"4"	"4"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"558.30579"	"1115.60430"	"1115.60467"	"-0.34"	"-0.00019"	"5/54"	"5"	"54"	"3508904.4006958"	"HCD"	"MS2"	"5.416097"	"149.8"	"100.000"	"70.3956"	"23633"	"23633"	"23616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.2"	""	"171.7"	""	"164.3"	""	"249.6"	""	"327.5"	"334.0"	""	"502"	"30"	"33.000"	"27.000"	"0.0252739848881803"	"19"	"0.002462"	"0.02298"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"4"	"4"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"558.30591"	"1115.60454"	"1115.60467"	"-0.12"	"-0.00007"	"5/54"	"5"	"54"	"4070838.13446045"	"HCD"	"MS2"	"3.271489"	"171.4"	"100.000"	"70.2532"	"23542"	"23542"	"23525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.1"	"2.8"	"200.3"	""	"199.0"	""	"296.3"	""	"355.6"	"366.8"	""	"504"	"28"	"34.000"	"27.000"	"0.0358426854354951"	"19"	"0.002189"	"0.02063"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAWEIPR"	"[K].dAWEIPR.[E]"	"N-Term(TMT6plex)"	"4"	"4"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4;Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3;Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"P50545; Q07014; Q9WUD9; F1LM93"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4; Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"558.30615"	"1115.60503"	"1115.60467"	"0.32"	"0.00018"	"5/54"	"5"	"54"	"664150.629150391"	"HCD"	"MS2"	"13.73888"	"40.4"	"100.000"	"70.5827"	"23675"	"23675"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"50.6"	""	"50.8"	""	"73.1"	"0.5"	"91.0"	"69.9"	""	"505"	"19"	"34.000"	"27.000"	"0.355845421601523"	"16"	"0.002525"	"0.02468"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYISNPR"	"[R].hYISNPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"558.31134"	"1115.61540"	"1115.61591"	"-0.45"	"-0.00025"	"6/52"	"6"	"52"	"1256793.54815674"	"HCD"	"MS2"	"0"	"75.5"	"100.000"	"21.1334"	"3766"	"3766"	"3739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.0"	""	"88.9"	""	"103.0"	""	"143.3"	""	"151.7"	"141.8"	""	"531"	"18"	"34.000"	"27.000"	"0.406503721076579"	"23"	"0.00511"	"0.06444"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYISNPR"	"[R].hYISNPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"Q9JLA3"	"UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"558.31183"	"1115.61638"	"1115.61591"	"0.42"	"0.00024"	"5/52"	"5"	"52"	"1322528.02087402"	"HCD"	"MS2"	"47.05686"	"78.2"	"100.000"	"21.1088"	"3719"	"3719"	"3697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.0"	""	"104.0"	""	"110.4"	""	"129.7"	""	"157.0"	"142.4"	""	"523"	"20"	"34.000"	"27.000"	"0.293407825799963"	"22"	"0.00296"	"0.03198"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"558.33466"	"1115.66203"	"1115.66219"	"-0.14"	"-0.00008"	"9/58"	"9"	"58"	"2405001.65722656"	"HCD"	"MS2"	"23.95887"	"114.1"	"100.000"	"49.5382"	"15166"	"15166"	"15143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.0"	""	"137.7"	""	"107.5"	""	"136.3"	"0.9"	"302.7"	"259.3"	""	"527"	"35"	"34.000"	"27.000"	"0.00831343718259214"	"24"	"0.0001686"	"0.001161"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVIVDDR"	"[R].aVVIVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"558.33472"	"1115.66216"	"1115.66219"	"-0.03"	"-0.00002"	"5/58"	"5"	"58"	"2560718.75268555"	"HCD"	"MS2"	"19.47003"	"109.7"	"100.000"	"49.8800"	"15270"	"15270"	"15250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.4"	""	"121.0"	""	"112.2"	""	"129.0"	""	"286.8"	"262.1"	""	"527"	"31"	"34.000"	"27.000"	"0.0195785542835781"	"23"	"0.0001686"	"0.001785"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGQQIR"	"[R].tLAGQQIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"558.33966"	"1115.67204"	"1115.67342"	"-1.24"	"-0.00069"	"6/62"	"6"	"62"	"3432912.03186035"	"HCD"	"MS2"	"13.37503"	"187.7"	"100.000"	"34.7064"	"9155"	"9155"	"9136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.1"	""	"234.2"	""	"274.2"	""	"317.3"	"2.4"	"354.9"	"337.0"	""	"511"	"35"	"34.000"	"27.000"	"0.00902382998818449"	"23"	"0.00511"	"0.06574"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGQQIR"	"[R].tLAGQQIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"558.34009"	"1115.67290"	"1115.67342"	"-0.47"	"-0.00026"	"6/62"	"6"	"62"	"1102669.65808105"	"HCD"	"MS2"	"0"	"76.9"	"100.000"	"35.1490"	"9296"	"9296"	"9275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.7"	""	"88.9"	""	"114.6"	""	"122.4"	"5.0"	"154.8"	"139.7"	""	"511"	"21"	"34.000"	"27.000"	"0.196060860531945"	"18"	"0.00329"	"0.03506"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGQQIR"	"[R].tLAGQQIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"558.34027"	"1115.67327"	"1115.67342"	"-0.14"	"-0.00008"	"6/62"	"6"	"62"	"1631001.56903076"	"HCD"	"MS2"	"0"	"96.1"	"100.000"	"34.9815"	"9266"	"9266"	"9252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.1"	""	"110.4"	""	"143.3"	""	"155.7"	"1.8"	"188.2"	"177.8"	""	"498"	"34"	"33.000"	"26.000"	"0.0106463158651745"	"19"	"0.001615"	"0.01488"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGQQIR"	"[R].tLAGQQIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"558.34027"	"1115.67327"	"1115.67342"	"-0.14"	"-0.00008"	"6/62"	"6"	"62"	"3168482.36627197"	"HCD"	"MS2"	"23.24964"	"175.3"	"100.000"	"34.8029"	"9158"	"9158"	"9131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.8"	""	"222.4"	""	"240.0"	""	"293.1"	"2.2"	"325.2"	"327.8"	""	"498"	"31"	"33.000"	"26.000"	"0.0188885816182267"	"21"	"0.002588"	"0.02658"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADMYTR"	"[K].mADMYTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"558.77203"	"1116.53679"	"1116.53792"	"-1.01"	"-0.00056"	"5/54"	"5"	"54"	"4500359.89648438"	"HCD"	"MS2"	"42.54023"	"221.3"	"100.000"	"44.3704"	"13037"	"13037"	"13009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"363.9"	""	"335.2"	""	"341.5"	""	"238.3"	"0.8"	"388.5"	"426.1"	""	"233"	"32"	"30.000"	"23.000"	"0.00658151575656332"	"19"	"0.001615"	"0.01405"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADMYTR"	"[K].mADMYTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"558.77209"	"1116.53691"	"1116.53792"	"-0.90"	"-0.00050"	"5/54"	"5"	"54"	"4221323.48065186"	"HCD"	"MS2"	"42.47912"	"220.6"	"100.000"	"44.1690"	"12990"	"12990"	"12969"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"319.5"	""	"337.4"	""	"327.6"	""	"272.7"	""	"389.2"	"446.2"	""	"233"	"30"	"30.000"	"23.000"	"0.0130114568366435"	"17"	"0.001261"	"0.009977"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYSYPAR"	"[R].mYSYPAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"558.78845"	"1116.56963"	"1116.57093"	"-1.17"	"-0.00065"	"5/48"	"5"	"48"	"2940597.27655029"	"HCD"	"MS2"	"10.57748"	"173.8"	"100.000"	"42.8445"	"12414"	"12414"	"12394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.8"	""	"196.1"	""	"171.7"	""	"273.1"	""	"412.7"	"337.2"	""	"392"	"17"	"32.000"	"25.000"	"0.384818614259865"	"15"	"0.004275"	"0.0504"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MYSYPAR"	"[R].mYSYPAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"558.78894"	"1116.57060"	"1116.57093"	"-0.29"	"-0.00016"	"5/48"	"5"	"48"	"3249192.95831299"	"HCD"	"MS2"	"22.35998"	"186.7"	"100.000"	"42.6604"	"12373"	"12373"	"12351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.5"	""	"211.3"	""	"180.2"	""	"301.6"	""	"449.2"	"353.8"	""	"400"	"15"	"33.000"	"26.000"	"0.668390080052229"	"17"	"0.004213"	"0.04621"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIDFSLR"	"[K].hIDFSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"372.88312"	"1116.63480"	"1116.63631"	"-1.35"	"-0.00050"	"6/52"	"6"	"52"	"2868636.70526123"	"HCD"	"MS2"	"16.79407"	"63.1"	"100.000"	"59.0534"	"18996"	"18996"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"87.6"	""	"98.5"	""	"105.7"	""	"113.4"	"107.7"	""	"578"	"24"	"34.000"	"27.000"	"0.109118363177445"	"24"	"0.003984"	"0.04368"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HIDFSLR"	"[K].hIDFSLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"372.88330"	"1116.63535"	"1116.63631"	"-0.86"	"-0.00032"	"5/52"	"5"	"52"	"3020215.33868408"	"HCD"	"MS2"	"20.41787"	"63.0"	"100.000"	"58.8784"	"18960"	"18960"	"18942"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.0"	""	"84.2"	""	"100.5"	""	"106.6"	""	"115.3"	"106.9"	""	"723"	"20"	"35.000"	"28.000"	"0.40560967123016"	"24"	"0.003401"	"0.03817"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QWVEGLR"	"[K].qWVEGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"558.82135"	"1116.63542"	"1116.63631"	"-0.79"	"-0.00044"	"5/60"	"5"	"60"	"493406.297058105"	"HCD"	"MS2"	"27.19919"	"31.8"	"100.000"	"67.9483"	"22637"	"22637"	"22611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.4"	""	"37.9"	""	"44.0"	""	"51.3"	"1.4"	"59.5"	"56.4"	""	"723"	"15"	"35.000"	"28.000"	"1.06932150665838"	"21"	"0.004852"	"0.06007"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QWVEGLR"	"[K].qWVEGLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"558.82172"	"1116.63616"	"1116.63631"	"-0.14"	"-0.00008"	"5/60"	"5"	"60"	"593112.814575195"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"67.9931"	"22623"	"22623"	"22604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.8"	""	"57.2"	""	"45.1"	""	"57.9"	""	"71.5"	"86.6"	""	"719"	"21"	"35.000"	"28.000"	"0.298331350921435"	"27"	"0.00329"	"0.03523"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"558.83197"	"1116.65666"	"1116.65744"	"-0.69"	"-0.00039"	"6/74"	"6"	"74"	"53177137.3132324"	"HCD"	"MS2"	"0"	"419.7"	"20.210"	"43.8007"	"12805"	"12805"	"12788"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"528.0"	""	"451.8"	""	"489.1"	""	"767.0"	""	"843.7"	"911.8"	""	"729"	"35"	"35.000"	"28.000"	"0.0106340214660343"	"24"	"0.001488"	"0.0123"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQEALR"	"[R].sLAQEALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"558.83203"	"1116.65679"	"1116.65744"	"-0.58"	"-0.00033"	"6/72"	"6"	"72"	"5890386.43505859"	"HCD"	"MS2"	"47.63442"	"275.1"	"100.000"	"44.3570"	"13066"	"13066"	"13053"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"400.3"	""	"368.9"	""	"384.3"	""	"384.8"	"2.6"	"524.9"	"542.2"	""	"729"	"32"	"35.000"	"28.000"	"0.0206394220854444"	"23"	"0.0001991"	"0.002459"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQEALR"	"[R].sLAQEALR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"558.83215"	"1116.65703"	"1116.65744"	"-0.37"	"-0.00020"	"6/72"	"6"	"72"	"5085657.84783936"	"HCD"	"MS2"	"46.67437"	"246.6"	"100.000"	"44.5469"	"13108"	"13108"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"321.5"	""	"330.9"	""	"345.6"	""	"356.5"	"2.4"	"482.8"	"499.2"	""	"727"	"32"	"35.000"	"28.000"	"0.0236322142439713"	"25"	"0.0001991"	"0.004749"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"558.83234"	"1116.65740"	"1116.65744"	"-0.04"	"-0.00002"	"6/74"	"6"	"74"	"63756013.0444336"	"HCD"	"MS2"	"0"	"457.6"	"18.175"	"43.6125"	"12763"	"12763"	"12746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"568.8"	""	"513.7"	""	"515.4"	""	"835.4"	""	"921.6"	"996.2"	""	"727"	"37"	"35.000"	"28.000"	"0.00725277851491188"	"24"	"0.001488"	"0.01251"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"558.83246"	"1116.65764"	"1116.65744"	"0.18"	"0.00010"	"6/74"	"6"	"74"	"3299511.75402832"	"HCD"	"MS2"	"41.67643"	"173.4"	"100.000"	"44.1774"	"12958"	"12958"	"12929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.4"	""	"211.8"	""	"225.8"	""	"290.9"	"1.0"	"339.3"	"356.3"	""	"750"	"19"	"35.000"	"28.000"	"0.421726865237598"	"18"	"0.0009352"	"0.007871"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"558.83246"	"1116.65764"	"1116.65744"	"0.18"	"0.00010"	"6/74"	"6"	"74"	"4803252.14038086"	"HCD"	"MS2"	"40.60772"	"233.1"	"100.000"	"43.9349"	"12894"	"12894"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"278.9"	""	"286.1"	""	"315.7"	""	"369.6"	""	"480.6"	"484.9"	""	"750"	"20"	"35.000"	"28.000"	"0.360604604393874"	"21"	"0.001103"	"0.00898"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"558.83246"	"1116.65764"	"1116.65744"	"0.18"	"0.00010"	"6/74"	"6"	"74"	"11268832.5701294"	"HCD"	"MS2"	"47.89925"	"466.5"	"100.000"	"43.3161"	"12641"	"12641"	"12619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"603.6"	""	"578.8"	""	"558.4"	""	"826.6"	""	"929.1"	"937.0"	""	"750"	"22"	"35.000"	"28.000"	"0.215293673327748"	"23"	"0.001049"	"0.008658"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALLQASR"	"[K].eALLQASR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"558.83246"	"1116.65764"	"1116.65744"	"0.18"	"0.00010"	"6/74"	"6"	"74"	"16564539.362915"	"HCD"	"MS2"	"26.99158"	"661.1"	"100.000"	"43.5205"	"12690"	"12690"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"838.5"	""	"784.3"	""	"779.4"	""	"1177.2"	"7.1"	"1345.0"	"1345.0"	""	"750"	"27"	"35.000"	"28.000"	"0.0835663180976364"	"24"	"0.001049"	"0.008776"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGPGQK"	"[K].aTGPGQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"558.84180"	"1116.67632"	"1116.67773"	"-1.26"	"-0.00071"	"6/50"	"6"	"50"	"3587514.83972168"	"HCD"	"MS2"	"0"	"267.4"	"100.000"	"23.7556"	"4765"	"4765"	"4740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.7"	""	"355.3"	""	"386.1"	""	"448.3"	""	"504.9"	"424.8"	""	"771"	"46"	"35.000"	"28.000"	"0.00105444609399124"	"22"	"0.002588"	"0.02691"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGPGQK"	"[K].aTGPGQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"Q63507"	"60S ribosomal protein L14 OS=Rattus norvegicus OX=10116 GN=Rpl14 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"558.84186"	"1116.67644"	"1116.67773"	"-1.16"	"-0.00064"	"6/50"	"6"	"50"	"4488677.02178955"	"HCD"	"MS2"	"0"	"334.5"	"100.000"	"23.8781"	"4777"	"4777"	"4759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"491.8"	""	"447.2"	""	"468.3"	""	"593.3"	""	"612.6"	"558.6"	""	"776"	"41"	"35.000"	"28.000"	"0.00282378564160287"	"22"	"0.003317"	"0.036"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"559.31342"	"1117.61955"	"1117.62032"	"-0.69"	"-0.00039"	"5/50"	"5"	"50"	"963729.664001465"	"HCD"	"MS2"	"11.57334"	"52.7"	"100.000"	"80.4141"	"27662"	"27662"	"27644"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"80.7"	""	"70.0"	""	"84.6"	"0.5"	"100.1"	"96.7"	""	"769"	"17"	"35.000"	"28.000"	"0.831565272373039"	"26"	"0.005392"	"0.06812"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVWAELR"	"[R].dVWAELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.2593"	"0.0000"	"1"	"1"	"3"	"559.31354"	"1117.61980"	"1117.62032"	"-0.47"	"-0.00026"	"7/56"	"7"	"56"	"1092407.20593262"	"HCD"	"MS2"	"24.27912"	"49.9"	"100.000"	"88.0668"	"30742"	"30742"	"30730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.1"	""	"74.5"	""	"73.7"	""	"71.7"	""	"89.4"	"83.1"	""	"767"	"27"	"35.000"	"28.000"	"0.0712468008527666"	""	"0.00455"	"0.05337"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVWAELR"	"[R].dVWAELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"3"	"559.31354"	"1117.61980"	"1117.62032"	"-0.47"	"-0.00026"	"7/56"	"7"	"56"	"1124440.19726563"	"HCD"	"MS2"	"31.23656"	"52.0"	"100.000"	"87.7587"	"30655"	"30655"	"30635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.0"	""	"73.5"	""	"73.4"	""	"79.4"	""	"83.5"	"89.9"	""	"767"	"30"	"35.000"	"28.000"	"0.0386158295004667"	""	"0.001348"	"0.01074"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"559.31354"	"1117.61980"	"1117.62032"	"-0.47"	"-0.00026"	"10/50"	"10"	"50"	"2921113.16821289"	"HCD"	"MS2"	"4.305574"	"125.7"	"100.000"	"80.1607"	"27587"	"27587"	"27570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.4"	""	"178.1"	""	"188.0"	""	"187.2"	""	"226.3"	"225.2"	""	"767"	"27"	"35.000"	"28.000"	"0.0827494980910047"	"28"	"0.00192"	"0.01609"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVWAELR"	"[R].dVWAELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"3"	"559.31360"	"1117.61992"	"1117.62032"	"-0.36"	"-0.00020"	"7/56"	"7"	"56"	"894648.999267578"	"HCD"	"MS2"	"29.79128"	"40.9"	"100.000"	"87.7896"	"30632"	"30632"	"30617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.7"	""	"57.8"	""	"51.9"	""	"61.7"	""	"65.4"	"80.4"	""	"767"	"30"	"35.000"	"28.000"	"0.0405289514783438"	""	"0.0007633"	"0.007283"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"559.31360"	"1117.61992"	"1117.62032"	"-0.36"	"-0.00020"	"5/50"	"5"	"50"	"1143669.12579346"	"HCD"	"MS2"	"12.33366"	"60.5"	"100.000"	"80.4532"	"27705"	"27705"	"27684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.4"	""	"89.5"	""	"83.3"	""	"86.4"	""	"104.4"	"123.2"	""	"767"	"23"	"35.000"	"28.000"	"0.20737928284963"	"25"	"0.006074"	"0.0746"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"559.31360"	"1117.61992"	"1117.62032"	"-0.36"	"-0.00020"	"10/50"	"10"	"50"	"2806319.35015869"	"HCD"	"MS2"	"3.655329"	"117.4"	"100.000"	"80.1221"	"27544"	"27544"	"27525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.7"	""	"168.5"	""	"172.7"	""	"182.2"	""	"202.9"	"226.0"	""	"767"	"24"	"35.000"	"28.000"	"0.153732386210071"	"27"	"0.004672"	"0.05498"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"559.31378"	"1117.62029"	"1117.62032"	"-0.03"	"-0.00002"	"5/50"	"5"	"50"	"1045535.29309082"	"HCD"	"MS2"	"35.8158"	"52.2"	"100.000"	"79.8250"	"27423"	"27423"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.7"	""	"67.5"	""	"77.4"	""	"84.0"	""	"92.1"	"96.2"	""	"772"	"23"	"35.000"	"28.000"	"0.207294273398918"	"26"	"0.00455"	"0.05384"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"559.31390"	"1117.62053"	"1117.62370"	"-2.83"	"-0.00158"	"5/60"	"5"	"60"	"2005620.06732178"	"HCD"	"MS2"	"21.70305"	"98.2"	"100.000"	"50.2908"	"15473"	"15473"	"15447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.4"	""	"132.8"	""	"151.2"	""	"148.4"	"1.0"	"184.2"	"169.0"	""	"779"	"20"	"35.000"	"28.000"	"0.35851510819786"	"19"	"0.004819"	"0.058"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVWAELR"	"[R].dVWAELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"559.31403"	"1117.62078"	"1117.62032"	"0.40"	"0.00023"	"5/56"	"5"	"56"	"428727.520202637"	"HCD"	"MS2"	"43.12032"	"23.1"	"100.000"	"88.2172"	"30842"	"30842"	"30815"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.7"	""	"28.3"	""	"33.9"	""	"36.3"	"1.0"	"39.7"	"45.5"	""	"779"	"19"	"35.000"	"28.000"	"0.454472345845244"	"24"	"0.004392"	"0.05168"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWGEDLR"	"[K].iWGEDLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"559.31403"	"1117.62078"	"1117.62032"	"0.40"	"0.00023"	"5/50"	"5"	"50"	"899811.006408691"	"HCD"	"MS2"	"42.14073"	"46.5"	"100.000"	"79.8775"	"27472"	"27472"	"27445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.6"	""	"61.3"	""	"74.0"	""	"73.1"	"1.6"	"85.6"	"80.0"	""	"779"	"20"	"35.000"	"28.000"	"0.418318876106914"	"28"	"0.005426"	"0.06859"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"559.31512"	"1117.62297"	"1117.62370"	"-0.65"	"-0.00036"	"10/60"	"10"	"60"	"6419772.42828369"	"HCD"	"MS2"	"9.366412"	"259.7"	"100.000"	"50.9038"	"15688"	"15688"	"15669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"407.8"	""	"383.6"	""	"396.1"	""	"301.7"	""	"475.3"	"495.5"	""	"753"	"27"	"35.000"	"28.000"	"0.0747764736385051"	"21"	"0.0005161"	"0.006707"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"559.31531"	"1117.62334"	"1117.62370"	"-0.32"	"-0.00018"	"10/60"	"10"	"60"	"6566009.2833252"	"HCD"	"MS2"	"7.433442"	"274.1"	"100.000"	"50.5944"	"15596"	"15596"	"15583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"411.1"	""	"397.4"	""	"448.2"	""	"301.8"	"5.3"	"514.7"	"517.9"	""	"772"	"27"	"35.000"	"28.000"	"0.0757857066858715"	"21"	"0.0001991"	"0.004781"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APTLEAMR"	"[R].aPTLEAMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"559.31549"	"1117.62370"	"1117.62370"	"0.01"	"0.00000"	"9/60"	"9"	"60"	"1895471.95941162"	"HCD"	"MS2"	"27.02114"	"92.0"	"100.000"	"50.6049"	"15566"	"15566"	"15542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.2"	""	"126.3"	""	"144.6"	""	"131.2"	"1.0"	"175.3"	"159.9"	""	"772"	"25"	"35.000"	"28.000"	"0.119285403695025"	"21"	"0.0001991"	"0.003787"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQQSLGTR"	"[R].vQQSLGTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"559.32880"	"1117.65032"	"1117.65269"	"-2.12"	"-0.00119"	"6/74"	"6"	"74"	"887839.075378418"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"29.8453"	"7161"	"7161"	"7141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.3"	""	"79.1"	""	"95.4"	""	"95.0"	"0.8"	"104.1"	"118.3"	""	"845"	"27"	"36.000"	"29.000"	"0.0820024283282948"	"24"	"0.0001686"	"0.001485"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNSVATAR"	"[K].gLNSVATAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"559.32959"	"1117.65190"	"1117.65269"	"-0.70"	"-0.00039"	"7/82"	"7"	"82"	"6654849.30090332"	"HCD"	"MS2"	"2.81189"	"292.4"	"100.000"	"33.8599"	"8775"	"8775"	"8755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.9"	""	"415.0"	""	"410.7"	""	"436.3"	""	"577.4"	"547.8"	""	"852"	"43"	"36.000"	"29.000"	"0.00209608842200298"	"22"	"9.9E-05"	"0.0004738"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNSVATAR"	"[K].gLNSVATAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"559.32971"	"1117.65215"	"1117.65269"	"-0.48"	"-0.00027"	"7/82"	"7"	"82"	"5260450.36077881"	"HCD"	"MS2"	"5.397109"	"261.7"	"100.000"	"33.7146"	"8754"	"8754"	"8729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"368.1"	""	"346.3"	""	"374.2"	""	"410.9"	"4.7"	"478.5"	"497.1"	""	"852"	"45"	"36.000"	"29.000"	"0.00147709898292779"	"24"	"0"	"0.0001704"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQQSLGTR"	"[R].vQQSLGTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"Q9WTT7"	"Basic leucine zipper and W2 domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Bzw2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"559.33026"	"1117.65325"	"1117.65269"	"0.50"	"0.00028"	"6/74"	"6"	"74"	"957011.680664063"	"HCD"	"MS2"	"0"	"69.9"	"100.000"	"29.7523"	"7163"	"7163"	"7143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.9"	""	"83.9"	""	"95.2"	""	"120.7"	"1.7"	"121.6"	"133.0"	""	"766"	"33"	"35.000"	"28.000"	"0.0193285276966831"	"26"	"0.0001686"	"0.001755"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAAEWGR"	"[K].sLAAEWGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"559.81067"	"1118.61406"	"1118.61557"	"-1.35"	"-0.00076"	"6/64"	"6"	"64"	"2889612.21276855"	"HCD"	"MS2"	"13.26139"	"142.4"	"100.000"	"58.7473"	"18872"	"18872"	"18855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.4"	""	"224.4"	""	"180.4"	""	"228.2"	""	"232.0"	"263.1"	""	"652"	"28"	"35.000"	"28.000"	"0.0533602185985465"	""	"0.0001991"	"0.003378"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAAEWGR"	"[K].sLAAEWGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"559.81091"	"1118.61455"	"1118.61557"	"-0.92"	"-0.00051"	"6/64"	"6"	"64"	"2505063.62188721"	"HCD"	"MS2"	"5.351358"	"127.6"	"100.000"	"59.0397"	"18991"	"18991"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.5"	""	"186.4"	""	"172.9"	""	"206.4"	""	"217.0"	"245.4"	""	"834"	"27"	"36.000"	"29.000"	"0.0837791702857839"	""	"0.0001991"	"0.004392"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAAEWGR"	"[K].sLAAEWGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"559.81116"	"1118.61504"	"1118.61557"	"-0.48"	"-0.00027"	"6/64"	"6"	"64"	"2525306.97686768"	"HCD"	"MS2"	"17.91692"	"123.8"	"100.000"	"58.4827"	"18799"	"18799"	"18779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.8"	""	"188.8"	""	"159.2"	""	"198.2"	""	"203.5"	"234.8"	""	"830"	"28"	"36.000"	"29.000"	"0.0704771115771624"	"29"	"0.0001991"	"0.004521"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAAEWGR"	"[K].sLAAEWGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"Q64591"	"2,4-dienoyl-CoA reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Decr1 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"559.81122"	"1118.61516"	"1118.61557"	"-0.37"	"-0.00021"	"6/64"	"6"	"64"	"2728903.0723877"	"HCD"	"MS2"	"1.795605"	"134.5"	"100.000"	"58.7794"	"18920"	"18920"	"18903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.8"	""	"203.7"	""	"178.9"	""	"219.5"	""	"227.3"	"228.0"	""	"827"	"27"	"36.000"	"29.000"	"0.0808119364963125"	"29"	"0.0001991"	"0.002495"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALLDGTSR"	"[K].gALLDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"559.82184"	"1118.63640"	"1118.63670"	"-0.27"	"-0.00015"	"7/70"	"7"	"70"	"12626320.8269043"	"HCD"	"MS2"	"51.98423"	"499.0"	"81.703"	"40.9029"	"11628"	"11628"	"11611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"805.8"	""	"764.8"	""	"770.3"	""	"684.3"	""	"805.0"	"892.7"	""	"823"	"27"	"36.000"	"29.000"	"0.0780494486578387"	"22"	"0.0001991"	"0.002895"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALLDGTSR"	"[K].gALLDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"559.82214"	"1118.63701"	"1118.63670"	"0.27"	"0.00015"	"7/70"	"7"	"70"	"10102733.2405396"	"HCD"	"MS2"	"47.63876"	"395.7"	"80.314"	"40.8469"	"11641"	"11641"	"11624"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"653.8"	""	"608.9"	""	"615.8"	""	"543.1"	""	"637.3"	"682.6"	""	"823"	"25"	"36.000"	"29.000"	"0.118951477159339"	"22"	"0.0001686"	"0.001506"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"559.82355"	"1118.63982"	"1118.64073"	"-0.81"	"-0.00045"	"5/50"	"5"	"50"	"1145454.27581787"	"HCD"	"MS2"	"10.67567"	"51.4"	"100.000"	"78.9440"	"27091"	"27091"	"27073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.8"	""	"66.6"	""	"76.0"	""	"82.6"	""	"95.7"	"96.3"	""	"960"	"36"	"36.000"	"29.000"	"0.0129193670588492"	"24"	"0.003317"	"0.03727"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"559.82367"	"1118.64006"	"1118.64073"	"-0.59"	"-0.00033"	"5/50"	"5"	"50"	"1073319.21484375"	"HCD"	"MS2"	"7.004631"	"50.5"	"100.000"	"78.8243"	"27016"	"27016"	"26993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.2"	""	"69.3"	""	"72.7"	""	"80.7"	""	"84.2"	"100.1"	""	"960"	"36"	"36.000"	"29.000"	"0.0121127077079068"	"21"	"0.001217"	"0.009309"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"559.82373"	"1118.64018"	"1118.64073"	"-0.48"	"-0.00027"	"5/50"	"5"	"50"	"2175111.33062744"	"HCD"	"MS2"	"2.918485"	"85.8"	"100.000"	"79.2458"	"27214"	"27214"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.0"	""	"119.2"	""	"130.3"	""	"133.1"	""	"146.9"	"152.5"	""	"957"	"37"	"36.000"	"29.000"	"0.00983743650178413"	"27"	"0.001615"	"0.01479"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"559.82379"	"1118.64031"	"1118.64073"	"-0.37"	"-0.00021"	"5/50"	"5"	"50"	"1179856.64465332"	"HCD"	"MS2"	"3.435253"	"54.2"	"100.000"	"79.3960"	"27248"	"27248"	"27233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.5"	""	"75.5"	""	"79.2"	""	"88.0"	"0.9"	"97.0"	"105.4"	""	"956"	"36"	"36.000"	"29.000"	"0.0130145122526124"	"26"	"0.001217"	"0.009428"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"559.82385"	"1118.64043"	"1118.64073"	"-0.27"	"-0.00015"	"5/50"	"5"	"50"	"2061280.20983887"	"HCD"	"MS2"	"0"	"83.5"	"100.000"	"79.1010"	"27129"	"27129"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.2"	""	"123.0"	""	"116.7"	""	"119.5"	""	"164.8"	"148.1"	""	"962"	"40"	"36.000"	"29.000"	"0.00464670472794101"	"29"	"0.001103"	"0.009041"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFIDEPR"	"[R].lFIDEPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"559.82440"	"1118.64153"	"1118.64073"	"0.72"	"0.00040"	"5/50"	"5"	"50"	"1006462.90264893"	"HCD"	"MS2"	"2.818197"	"44.6"	"100.000"	"79.5504"	"27338"	"27338"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.0"	""	"63.2"	""	"61.0"	""	"68.1"	""	"81.7"	"92.2"	""	"953"	"33"	"36.000"	"29.000"	"0.0255307107305107"	"23"	"0.00212"	"0.01898"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQVSTLR"	"[K].sVQVSTLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"559.83960"	"1118.67192"	"1118.67309"	"-1.04"	"-0.00058"	"6/76"	"6"	"76"	"7837851.08947754"	"HCD"	"MS2"	"33.98814"	"358.4"	"100.000"	"40.7673"	"11573"	"11573"	"11550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"594.3"	""	"534.9"	""	"543.3"	""	"512.2"	""	"583.5"	"626.6"	""	"658"	"31"	"35.000"	"28.000"	"0.0242770491712474"	"21"	"0.0007633"	"0.007489"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQVSTLR"	"[K].sVQVSTLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"559.83978"	"1118.67229"	"1118.67309"	"-0.71"	"-0.00040"	"6/76"	"6"	"76"	"6849305.26757813"	"HCD"	"MS2"	"30.84975"	"338.3"	"100.000"	"40.6285"	"11551"	"11551"	"11537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"527.1"	""	"525.8"	""	"522.5"	""	"492.3"	""	"566.9"	"566.6"	""	"658"	"38"	"35.000"	"28.000"	"0.00492261530855069"	"25"	"0.0001991"	"0.003571"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDASESLR"	"[K].lDASESLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"560.31354"	"1119.61980"	"1119.62072"	"-0.82"	"-0.00046"	"6/64"	"6"	"64"	"5552237.21075439"	"HCD"	"MS2"	"8.875757"	"275.3"	"100.000"	"46.1993"	"13781"	"13781"	"13761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.9"	""	"228.7"	""	"270.9"	""	"541.0"	"1.6"	"659.6"	"668.8"	""	"798"	"39"	"36.000"	"29.000"	"0.0053330161110203"	"25"	"0.0001991"	"0.003578"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDASESLR"	"[K].lDASESLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"560.31372"	"1119.62016"	"1119.62072"	"-0.49"	"-0.00028"	"6/64"	"6"	"64"	"6075870.71603394"	"HCD"	"MS2"	"14.53142"	"296.9"	"100.000"	"45.8943"	"13691"	"13691"	"13669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.2"	""	"254.5"	""	"306.4"	""	"563.3"	""	"713.8"	"728.0"	""	"798"	"35"	"36.000"	"29.000"	"0.0128520644772209"	"25"	"0.0001991"	"0.004465"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTLTQNR"	"[K].tGTLTQNR.[M]"	"N-Term(TMT6plex)"	"2"	"6"	"P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1;Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P09626; Q64541; P06687; P54708; P06685; P06686"	"Potassium-transporting ATPase alpha chain 1 OS=Rattus norvegicus OX=10116 GN=Atp4a PE=1 SV=3; Sodium/potassium-transporting ATPase subunit alpha-4 OS=Rattus norvegicus OX=10116 GN=Atp1a4 PE=2 SV=1; Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Potassium-transporting ATPase alpha chain 2 OS=Rattus norvegicus OX=10116 GN=Atp12a PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"560.31909"	"1119.63091"	"1119.63195"	"-0.93"	"-0.00052"	"7/68"	"7"	"68"	"2305805.33636475"	"HCD"	"MS2"	"19.94678"	"158.5"	"100.000"	"24.2205"	"4918"	"4918"	"4887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.9"	""	"200.9"	""	"197.6"	""	"257.7"	""	"309.4"	"326.5"	""	"820"	"17"	"36.000"	"29.000"	"0.751248913172197"	"22"	"0.008289"	"0.1053"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIATSQNR"	"[K].tIATSQNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"560.32037"	"1119.63347"	"1119.63195"	"1.36"	"0.00076"	"6/68"	"6"	"68"	"294384.944641113"	"HCD"	"MS2"	"9.479202"	"27.7"	"100.000"	"21.8517"	"4014"	"4014"	"4001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.7"	""	"29.0"	""	"40.5"	""	"49.0"	""	"57.1"	"49.5"	""	"716"	"23"	"35.000"	"28.000"	"0.166679821481219"	"23"	"0.00296"	"0.03157"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLFEAAR"	"[K].sPLFEAAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"560.32141"	"1119.63555"	"1119.63597"	"-0.38"	"-0.00021"	"5/64"	"5"	"64"	"1516632.45806885"	"HCD"	"MS2"	"0"	"77.5"	"100.000"	"56.7840"	"18071"	"18071"	"18053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.1"	""	"100.8"	""	"102.2"	""	"134.6"	"0.5"	"146.2"	"154.8"	""	"756"	"13"	"35.000"	"28.000"	"1.94756427651904"	"17"	"0.00212"	"0.01956"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"560.32147"	"1119.63567"	"1119.63597"	"-0.27"	"-0.00015"	"5/50"	"5"	"50"	"2587666.05834961"	"HCD"	"MS2"	"10.13019"	"131.5"	"100.000"	"49.1905"	"14990"	"14990"	"14968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.2"	""	"158.8"	""	"180.2"	""	"219.2"	""	"254.7"	"251.3"	""	"758"	"33"	"35.000"	"28.000"	"0.0192149478436113"	"27"	"0.0009352"	"0.008204"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"560.32153"	"1119.63579"	"1119.63597"	"-0.17"	"-0.00009"	"5/50"	"5"	"50"	"4865176.46832275"	"HCD"	"MS2"	"7.502334"	"215.5"	"100.000"	"49.4753"	"15105"	"15105"	"15090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"269.9"	""	"250.9"	""	"298.9"	""	"368.7"	""	"438.5"	"419.5"	""	"758"	"33"	"35.000"	"28.000"	"0.0185626172540641"	"27"	"0.002373"	"0.02263"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"560.32172"	"1119.63616"	"1119.63597"	"0.16"	"0.00009"	"5/50"	"5"	"50"	"5564918.56317139"	"HCD"	"MS2"	"10.4482"	"237.1"	"100.000"	"49.1358"	"15002"	"15002"	"14985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"309.0"	""	"279.3"	""	"321.6"	""	"396.3"	""	"491.2"	"456.5"	""	"763"	"33"	"35.000"	"28.000"	"0.0183018310654897"	"27"	"0.001999"	"0.01743"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPYVQR"	"[K].lDPYVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"560.32227"	"1119.63725"	"1119.63597"	"1.14"	"0.00064"	"5/50"	"5"	"50"	"1565643.21386719"	"HCD"	"MS2"	"42.9045"	"88.6"	"100.000"	"48.8419"	"14883"	"14883"	"14864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.6"	""	"117.8"	""	"117.3"	""	"154.7"	""	"170.8"	"163.6"	""	"741"	"35"	"35.000"	"28.000"	"0.0112147142511153"	""	"0.0001991"	"0.005552"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"560.79633"	"1120.58537"	"1120.58698"	"-1.43"	"-0.00080"	"9/54"	"9"	"54"	"843886.557800293"	"HCD"	"MS2"	"19.61022"	"43.1"	"100.000"	"85.5215"	"29755"	"29755"	"29740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.1"	""	"56.4"	""	"53.0"	""	"59.8"	"1.4"	"79.7"	"86.0"	""	"615"	"31"	"34.000"	"27.000"	"0.0223792289895074"	"27"	"0.0009352"	"0.007971"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"560.79639"	"1120.58550"	"1120.58698"	"-1.32"	"-0.00074"	"5/54"	"5"	"54"	"872647.108459473"	"HCD"	"MS2"	"18.58835"	"48.3"	"100.000"	"85.5131"	"29722"	"29722"	"29705"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.6"	""	"58.6"	""	"65.1"	""	"61.4"	"1.3"	"97.3"	"99.0"	""	"615"	"26"	"34.000"	"27.000"	"0.0704441803226091"	"25"	"0.001049"	"0.008809"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"560.79645"	"1120.58562"	"1120.58698"	"-1.21"	"-0.00068"	"9/54"	"9"	"54"	"744000.764343262"	"HCD"	"MS2"	"40.37007"	"46.3"	"100.000"	"85.2114"	"29600"	"29600"	"29575"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.2"	""	"62.9"	""	"61.4"	""	"61.0"	""	"90.9"	"94.3"	""	"615"	"22"	"34.000"	"27.000"	"0.195814622679184"	"22"	"0.001999"	"0.01759"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMEDLLR"	"[R].dMEDLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"560.79657"	"1120.58586"	"1120.58698"	"-0.99"	"-0.00056"	"5/54"	"5"	"54"	"782663.386108398"	"HCD"	"MS2"	"44.02613"	"46.9"	"100.000"	"85.2129"	"29630"	"29630"	"29605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"61.4"	""	"66.6"	""	"66.4"	""	"91.6"	"87.0"	""	"586"	"23"	"34.000"	"27.000"	"0.143836007712713"	"21"	"0.000885"	"0.007683"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"560.81836"	"1120.62944"	"1120.63122"	"-1.59"	"-0.00089"	"6/60"	"6"	"60"	"2109897.96612549"	"HCD"	"MS2"	"23.58241"	"112.5"	"100.000"	"63.1821"	"20672"	"20672"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.7"	""	"146.4"	""	"124.0"	""	"152.8"	""	"237.7"	"272.3"	""	"631"	"23"	"34.000"	"28.000"	"0.144876973050032"	"17"	"0.00455"	"0.05325"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"560.81848"	"1120.62969"	"1120.63122"	"-1.37"	"-0.00077"	"5/60"	"5"	"60"	"3471306.21405029"	"HCD"	"MS2"	"30.90072"	"145.0"	"100.000"	"62.5923"	"20432"	"20432"	"20411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.4"	""	"201.9"	""	"181.7"	""	"203.1"	""	"289.3"	"322.0"	""	"631"	"17"	"34.000"	"28.000"	"0.623733921455292"	"17"	"0.005871"	"0.07264"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"560.81885"	"1120.63042"	"1120.63122"	"-0.72"	"-0.00040"	"9/60"	"9"	"60"	"8010720.4274292"	"HCD"	"MS2"	"9.505188"	"332.5"	"100.000"	"62.8755"	"20547"	"20547"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"395.2"	""	"445.1"	""	"412.6"	""	"440.7"	""	"684.9"	"782.7"	""	"677"	"32"	"35.000"	"28.000"	"0.0232572666944818"	"21"	"0.004751"	"0.05577"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"560.81891"	"1120.63054"	"1120.63122"	"-0.61"	"-0.00034"	"9/60"	"9"	"60"	"8137147.95336914"	"HCD"	"MS2"	"7.936633"	"347.3"	"100.000"	"62.7680"	"20537"	"20537"	"20526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"432.7"	""	"449.9"	""	"438.2"	""	"450.9"	""	"700.5"	"835.2"	""	"677"	"30"	"35.000"	"28.000"	"0.0336944733773492"	"22"	"0.004437"	"0.05232"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"560.81897"	"1120.63066"	"1120.63122"	"-0.50"	"-0.00028"	"6/60"	"6"	"60"	"3480155.72235107"	"HCD"	"MS2"	"19.98444"	"173.5"	"100.000"	"63.0400"	"20647"	"20647"	"20636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.3"	""	"213.4"	""	"212.7"	""	"238.3"	""	"350.9"	"432.6"	""	"676"	"28"	"35.000"	"28.000"	"0.0579317569937847"	"19"	"0.00511"	"0.06507"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNDLLFR"	"[K].nNDLLFR.[ND]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355; Q62774"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2; Unconventional myosin-Ia (Fragment) OS=Rattus norvegicus OX=10116 GN=Myo1a PE=2 SV=1"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"560.81989"	"1120.63249"	"1120.63122"	"1.13"	"0.00064"	"5/60"	"5"	"60"	"2964731.28918457"	"HCD"	"MS2"	"22.04879"	"126.7"	"100.000"	"62.4918"	"20425"	"20425"	"20408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.6"	""	"175.4"	""	"173.4"	""	"170.1"	""	"236.5"	"299.1"	""	"676"	"17"	"35.000"	"28.000"	"0.67907337066175"	"20"	"0.009239"	"0.1191"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLSANIR"	"[R].amLSANIR.[Q]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"560.81995"	"1120.63262"	"1120.63459"	"-1.77"	"-0.00099"	"7/60"	"7"	"60"	"4887718.57122803"	"HCD"	"MS2"	"9.86379"	"209.4"	"100.000"	"39.7520"	"11161"	"11161"	"11146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.5"	""	"242.1"	""	"252.5"	""	"431.4"	""	"421.6"	"385.6"	""	"676"	"17"	"35.000"	"28.000"	"0.623615211682662"	"14"	"0.00307"	"0.03405"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLSANIR"	"[R].amLSANIR.[Q]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.82031"	"1120.63335"	"1120.63459"	"-1.11"	"-0.00062"	"7/60"	"7"	"60"	"5104199.28485107"	"HCD"	"MS2"	"14.1697"	"208.7"	"100.000"	"39.6517"	"11155"	"11155"	"11141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.1"	""	"242.1"	""	"245.9"	""	"435.6"	""	"406.5"	"398.5"	""	"648"	"18"	"35.000"	"28.000"	"0.484780352574597"	"14"	"0.00192"	"0.01622"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEVLIR"	"[R].fDEVLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"560.82977"	"1120.65227"	"1120.65638"	"-3.66"	"-0.00205"	"9/50"	"9"	"50"	"3948834.16943359"	"HCD"	"MS2"	"39.9535"	"160.5"	"100.000"	"94.8461"	"33477"	"33477"	"33459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.0"	""	"234.2"	""	"220.7"	""	"232.4"	""	"281.7"	"344.7"	""	"636"	"21"	"35.000"	"28.000"	"0.270039391061548"	"20"	"0.004158"	"0.04497"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEVLIR"	"[R].fDEVLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"560.82983"	"1120.65239"	"1120.65638"	"-3.56"	"-0.00199"	"8/50"	"8"	"50"	"4342252.09887695"	"HCD"	"MS2"	"26.78668"	"180.4"	"100.000"	"94.8431"	"33509"	"33509"	"33496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.9"	""	"278.9"	""	"258.4"	""	"265.5"	""	"307.1"	"383.5"	""	"636"	"23"	"35.000"	"28.000"	"0.146698988710201"	"20"	"0.003818"	"0.04151"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEVLIR"	"[R].fDEVLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"560.83142"	"1120.65557"	"1120.65638"	"-0.72"	"-0.00041"	"9/50"	"9"	"50"	"7091259.92816162"	"HCD"	"MS2"	"4.804945"	"292.3"	"100.000"	"95.1249"	"33624"	"33624"	"33607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"343.7"	""	"438.8"	""	"442.8"	""	"339.4"	""	"550.1"	"662.0"	""	"621"	"32"	"34.000"	"27.000"	"0.0199095573529693"	"24"	"0.002035"	"0.01844"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEVLIR"	"[R].fDEVLIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"560.83154"	"1120.65581"	"1120.65638"	"-0.51"	"-0.00028"	"5/50"	"5"	"50"	"7328971.894104"	"HCD"	"MS2"	"5.58591"	"318.4"	"100.000"	"95.1298"	"33593"	"33593"	"33577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"399.3"	""	"465.8"	""	"471.2"	""	"394.2"	""	"598.0"	"694.6"	""	"613"	"32"	"34.000"	"27.000"	"0.0190735037404347"	"25"	"0.003317"	"0.03628"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSAAGTK"	"[K].qSAAGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"560.83948"	"1120.67168"	"1120.67264"	"-0.86"	"-0.00048"	"6/68"	"6"	"68"	"2247547.59283447"	"HCD"	"MS2"	"0"	"180.2"	"100.000"	"21.0354"	"3689"	"3689"	"3674"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.5"	""	"177.6"	""	"203.7"	""	"258.6"	""	"274.1"	"537.4"	""	"467"	"40"	"33.000"	"26.000"	"0.00224536467002586"	""	"0.001348"	"0.01128"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSAAGTK"	"[K].qSAAGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"P47858"	"ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"560.83990"	"1120.67253"	"1120.67264"	"-0.10"	"-0.00006"	"10/68"	"10"	"68"	"1559454.02172852"	"HCD"	"MS2"	"0"	"138.0"	"100.000"	"21.0302"	"3724"	"3724"	"3706"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.5"	""	"142.5"	""	"159.4"	""	"192.9"	""	"223.2"	"386.9"	""	"468"	"36"	"33.000"	"26.000"	"0.00532372798800664"	""	"0.001261"	"0.00954"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAIPDFR"	"[R].sSAIPDFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"561.31067"	"1121.61406"	"1121.61524"	"-1.05"	"-0.00059"	"9/66"	"9"	"66"	"1132522.29223633"	"HCD"	"MS2"	"32.19629"	"58.4"	"100.000"	"60.0502"	"19435"	"19435"	"19413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"58.8"	""	"56.8"	""	"91.0"	"2.0"	"185.4"	"110.9"	""	"755"	"23"	"35.000"	"28.000"	"0.177385025998469"	"23"	"0.002189"	"0.02059"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTIENPR"	"[K].yTIENPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"561.31110"	"1121.61492"	"1121.61524"	"-0.29"	"-0.00016"	"5/56"	"5"	"56"	"1617126.65576172"	"HCD"	"MS2"	"31.41385"	"126.3"	"100.000"	"38.4201"	"10622"	"10622"	"10594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.6"	""	"155.6"	""	"166.6"	""	"188.1"	"3.0"	"240.0"	"260.5"	""	"756"	"16"	"35.000"	"28.000"	"1.03631503698874"	"22"	"0.004213"	"0.04575"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAIPDFR"	"[R].sSAIPDFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"561.31128"	"1121.61528"	"1121.61524"	"0.04"	"0.00002"	"5/66"	"5"	"66"	"1305165.23413086"	"HCD"	"MS2"	"52.47066"	"67.5"	"100.000"	"60.0871"	"19417"	"19417"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.1"	""	"56.1"	""	"70.0"	""	"92.3"	""	"258.1"	"126.3"	""	"762"	"25"	"35.000"	"28.000"	"0.121038902091756"	"23"	"0.001596"	"0.01297"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELAQYR"	"[K].lELAQYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"561.32867"	"1121.65007"	"1121.65162"	"-1.38"	"-0.00078"	"5/52"	"5"	"52"	"2183624.01715088"	"HCD"	"MS2"	"36.6525"	"103.0"	"100.000"	"65.7212"	"21704"	"21704"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.5"	""	"145.9"	""	"129.3"	""	"176.0"	""	"201.0"	"198.6"	""	"488"	"29"	"33.000"	"26.000"	"0.0329905705419403"	"23"	"0.001951"	"0.01639"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELAQYR"	"[K].lELAQYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"561.32874"	"1121.65019"	"1121.65162"	"-1.28"	"-0.00072"	"5/52"	"5"	"52"	"17294741.3015747"	"HCD"	"MS2"	"11.78137"	"412.0"	"58.327"	"66.0290"	"21863"	"21863"	"21846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"535.5"	""	"559.1"	""	"551.1"	""	"680.1"	""	"765.9"	"820.4"	""	"488"	"23"	"33.000"	"26.000"	"0.115981795130044"	"18"	"0.007601"	"0.09698"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVFEQR"	"[R].tLVFEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXN3"	"Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Tmed5 PE=2 SV=1"	"Q6AXN3"	"Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Tmed5 PE=2 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"561.32904"	"1121.65080"	"1121.65162"	"-0.73"	"-0.00041"	"5/58"	"5"	"58"	"1923139.06085205"	"HCD"	"MS2"	"19.21153"	"88.3"	"100.000"	"56.8424"	"18130"	"18130"	"18109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.8"	""	"112.2"	""	"124.9"	""	"141.3"	"2.1"	"172.1"	"175.3"	""	"488"	"29"	"33.000"	"26.000"	"0.0323139334587498"	"21"	"0.001951"	"0.01691"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLVEFAR"	"[K].tGLVEFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"561.32904"	"1121.65080"	"1121.65162"	"-0.73"	"-0.00041"	"6/64"	"6"	"64"	"4675901.84686279"	"HCD"	"MS2"	"0"	"201.9"	"100.000"	"68.2237"	"22717"	"22717"	"22700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.1"	""	"308.1"	""	"302.4"	""	"310.4"	""	"315.7"	"337.7"	""	"488"	"28"	"33.000"	"26.000"	"0.0406808319862459"	"19"	"0.0001991"	"0.004682"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELAQYR"	"[K].lELAQYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"561.32922"	"1121.65117"	"1121.65162"	"-0.40"	"-0.00023"	"5/52"	"5"	"52"	"2553713.13146973"	"HCD"	"MS2"	"16.90424"	"121.6"	"100.000"	"65.7363"	"21743"	"21743"	"21725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.2"	""	"171.3"	""	"169.9"	""	"199.8"	"1.0"	"210.5"	"233.1"	""	"488"	"23"	"33.000"	"26.000"	"0.115448907186601"	"19"	"0.00296"	"0.03142"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLVEFAR"	"[K].tGLVEFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"561.32922"	"1121.65117"	"1121.65162"	"-0.40"	"-0.00023"	"6/64"	"6"	"64"	"5138097.56152344"	"HCD"	"MS2"	"1.860149"	"205.6"	"100.000"	"68.2179"	"22747"	"22747"	"22730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"350.7"	""	"296.4"	""	"318.3"	""	"308.1"	""	"325.6"	"346.1"	""	"488"	"30"	"33.000"	"26.000"	"0.0248536298685204"	"21"	"0.0001991"	"0.002631"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLVEFAR"	"[K].tGLVEFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"561.32928"	"1121.65129"	"1121.65162"	"-0.30"	"-0.00017"	"9/64"	"9"	"64"	"3463546.47979736"	"HCD"	"MS2"	"2.226837"	"155.3"	"100.000"	"67.9232"	"22627"	"22627"	"22611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.0"	""	"222.5"	""	"225.8"	""	"265.8"	""	"254.5"	"252.3"	""	"492"	"22"	"33.000"	"26.000"	"0.150638196364294"	"20"	"0.0001991"	"0.005924"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVFEQR"	"[R].tLVFEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXN3"	"Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Tmed5 PE=2 SV=1"	"Q6AXN3"	"Transmembrane emp24 domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Tmed5 PE=2 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"561.32935"	"1121.65141"	"1121.65162"	"-0.19"	"-0.00011"	"5/58"	"5"	"58"	"2026181.31463623"	"HCD"	"MS2"	"35.25117"	"98.3"	"100.000"	"57.0981"	"18199"	"18199"	"18184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.1"	""	"127.6"	""	"133.3"	""	"162.0"	""	"195.3"	"190.2"	""	"492"	"29"	"33.000"	"26.000"	"0.0345887690935959"	"21"	"0.00212"	"0.01889"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGLVEFAR"	"[K].tGLVEFAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"561.32953"	"1121.65178"	"1121.65162"	"0.14"	"0.00008"	"8/64"	"8"	"64"	"3809134.53070068"	"HCD"	"MS2"	"3.404356"	"174.0"	"100.000"	"67.9150"	"22592"	"22592"	"22575"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"293.5"	""	"258.2"	""	"266.0"	""	"294.8"	"0.9"	"259.5"	"270.0"	""	"497"	"27"	"33.000"	"26.000"	"0.0462728653460723"	"20"	"0.0001991"	"0.004461"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDIFDR"	"[K].dLDIFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"561.80280"	"1122.59831"	"1122.59925"	"-0.84"	"-0.00047"	"6/58"	"6"	"58"	"525294.374084473"	"HCD"	"MS2"	"14.03498"	"29.6"	"100.000"	"96.4147"	"34113"	"34113"	"34098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"34.3"	""	"39.9"	""	"56.4"	""	"57.6"	"54.6"	""	"686"	"39"	"35.000"	"28.000"	"0.00392910938915819"	""	"0.0001991"	"0.002736"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDIFDR"	"[K].dLDIFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"561.80292"	"1122.59856"	"1122.59925"	"-0.62"	"-0.00035"	"6/58"	"6"	"58"	"813614.01751709"	"HCD"	"MS2"	"2.182206"	"39.2"	"100.000"	"96.7174"	"34236"	"34236"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"43.4"	""	"49.1"	""	"70.1"	""	"85.6"	"78.7"	""	"686"	"37"	"35.000"	"28.000"	"0.00697098454751123"	""	"0.000264"	"0.006062"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDIFDR"	"[K].dLDIFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"561.80292"	"1122.59856"	"1122.59925"	"-0.62"	"-0.00035"	"6/58"	"6"	"58"	"847443.281311035"	"HCD"	"MS2"	"2.942924"	"40.6"	"100.000"	"96.7543"	"34281"	"34281"	"34263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"42.4"	""	"43.6"	""	"72.9"	""	"93.1"	"86.8"	""	"686"	"37"	"35.000"	"28.000"	"0.00644605668163521"	""	"0.0001991"	"0.005942"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDIFDR"	"[K].dLDIFDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"561.80310"	"1122.59892"	"1122.59925"	"-0.29"	"-0.00017"	"5/58"	"5"	"58"	"493168.640686035"	"HCD"	"MS2"	"10.28472"	"29.3"	"100.000"	"96.4445"	"34157"	"34157"	"34139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"34.9"	""	"34.9"	""	"53.3"	""	"56.0"	"57.7"	""	"696"	"38"	"35.000"	"28.000"	"0.00569612149456877"	""	"0.0003294"	"0.006197"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAADYAR"	"[K].iNAADYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.80853"	"1122.60979"	"1122.61049"	"-0.62"	"-0.00035"	"6/68"	"6"	"68"	"2446578.543396"	"HCD"	"MS2"	"59.58731"	"143.5"	"100.000"	"43.8610"	"12864"	"12864"	"12842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.5"	""	"187.4"	""	"193.2"	""	"241.0"	""	"247.0"	"270.6"	""	"620"	"5"	"34.000"	"27.000"	"10.6994559194115"	"13"	"0.004275"	"0.05044"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAADYAR"	"[K].iNAADYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.80853"	"1122.60979"	"1122.61049"	"-0.62"	"-0.00035"	"6/68"	"6"	"68"	"2777414.85528564"	"HCD"	"MS2"	"42.23479"	"184.6"	"100.000"	"43.9729"	"12874"	"12874"	"12851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.3"	""	"252.9"	""	"272.9"	""	"283.2"	""	"298.9"	"340.1"	""	"620"	"18"	"34.000"	"27.000"	"0.514471941305644"	"14"	"0.002711"	"0.0284"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAEGINR"	"[R].aYAEGINR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"561.80859"	"1122.60991"	"1122.61049"	"-0.51"	"-0.00029"	"6/58"	"6"	"58"	"7832379.53179932"	"HCD"	"MS2"	"38.02119"	"407.4"	"100.000"	"33.2552"	"8566"	"8566"	"8547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"656.8"	""	"566.6"	""	"544.0"	""	"642.0"	""	"723.0"	"724.7"	""	"620"	"28"	"34.000"	"27.000"	"0.05399601307514"	"19"	"0.0001991"	"0.005971"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYAEGINR"	"[R].aYAEGINR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"561.80859"	"1122.60991"	"1122.61049"	"-0.51"	"-0.00029"	"6/58"	"6"	"58"	"7865573.26483154"	"HCD"	"MS2"	"28.99214"	"387.8"	"100.000"	"33.3771"	"8578"	"8578"	"8560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"612.2"	""	"538.3"	""	"535.0"	""	"600.4"	""	"684.6"	"701.7"	""	"620"	"27"	"34.000"	"27.000"	"0.0687640890138068"	"18"	"0.0001991"	"0.00438"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAADYAR"	"[K].iNAADYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"561.80872"	"1122.61016"	"1122.61049"	"-0.30"	"-0.00017"	"7/68"	"7"	"68"	"2978862.91546631"	"HCD"	"MS2"	"35.15589"	"165.4"	"100.000"	"43.6767"	"12754"	"12754"	"12732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"265.3"	""	"206.9"	""	"232.7"	""	"249.5"	""	"305.1"	"307.9"	""	"643"	"28"	"35.000"	"28.000"	"0.0475533346796078"	"17"	"0.0001991"	"0.002889"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAADYAR"	"[K].iNAADYAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"Q6DGG1"	"Protein ABHD14B OS=Rattus norvegicus OX=10116 GN=Abhd14b PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"561.80878"	"1122.61028"	"1122.61049"	"-0.19"	"-0.00011"	"12/68"	"12"	"68"	"4161514.94519043"	"HCD"	"MS2"	"7.655759"	"216.6"	"100.000"	"43.5481"	"12736"	"12736"	"12714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.4"	""	"290.3"	""	"300.9"	""	"321.3"	""	"405.8"	"404.8"	""	"643"	"39"	"35.000"	"28.000"	"0.00392808590743006"	"21"	"0.0001686"	"0.00106"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTLTMNR"	"[K].tGTLTMNR.[M]"	"N-Term(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"561.80988"	"1122.61247"	"1122.61386"	"-1.23"	"-0.00069"	"7/66"	"7"	"66"	"6440325.90863037"	"HCD"	"MS2"	"42.59115"	"430.5"	"100.000"	"34.7594"	"9140"	"9140"	"9124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"541.9"	""	"589.0"	""	"607.9"	""	"561.4"	""	"864.1"	"925.5"	""	"644"	"13"	"35.000"	"28.000"	"1.80657448282456"	"21"	"0.001951"	"0.01673"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTLTMNR"	"[K].tGTLTMNR.[M]"	"N-Term(TMT6plex)"	"2"	"2"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1;Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"Q64542; P11505"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"561.81055"	"1122.61382"	"1122.61386"	"-0.04"	"-0.00002"	"6/66"	"6"	"66"	"5562475.26275635"	"HCD"	"MS2"	"36.79875"	"367.8"	"100.000"	"34.6812"	"9145"	"9145"	"9120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"477.7"	""	"488.9"	""	"513.5"	""	"490.1"	""	"763.4"	"760.5"	""	"666"	"20"	"35.000"	"28.000"	"0.297470726083187"	"22"	"0.001162"	"0.009229"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"561.82074"	"1122.63420"	"1122.63564"	"-1.28"	"-0.00072"	"5/54"	"5"	"54"	"601604.088928223"	"HCD"	"MS2"	"48.71522"	"26.6"	"100.000"	"83.8571"	"29053"	"29053"	"29034"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"30.5"	""	"22.9"	""	"54.0"	""	"57.2"	"61.4"	""	"571"	"18"	"34.000"	"27.000"	"0.449372107805106"	"16"	"0.00452"	"0.05261"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTEVER"	"[K].fLTEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"561.82098"	"1122.63469"	"1122.63564"	"-0.85"	"-0.00047"	"9/54"	"9"	"54"	"649516.539001465"	"HCD"	"MS2"	"32.1486"	"44.2"	"100.000"	"69.3637"	"23180"	"23180"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.8"	""	"50.3"	""	"59.4"	""	"75.9"	"0.4"	"85.3"	"88.1"	""	"574"	"21"	"34.000"	"27.000"	"0.246536880672049"	"19"	"0.0009352"	"0.00811"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLTEVER"	"[K].fLTEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"O35217"	"Multiple inositol polyphosphate phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Minpp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"561.82111"	"1122.63494"	"1122.63564"	"-0.63"	"-0.00035"	"9/54"	"9"	"54"	"645406.340881348"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"69.4251"	"23239"	"23239"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"58.7"	""	"60.4"	""	"64.4"	""	"87.2"	"88.9"	""	"574"	"17"	"34.000"	"27.000"	"0.541853517190637"	"18"	"0.006845"	"0.08569"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"561.82117"	"1122.63506"	"1122.63564"	"-0.52"	"-0.00029"	"4/54"	"4"	"54"	"755567.77331543"	"HCD"	"MS2"	"32.30726"	"34.4"	"100.000"	"83.9183"	"29107"	"29107"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"32.8"	""	"34.7"	""	"66.5"	"0.5"	"78.2"	"84.8"	""	"574"	"26"	"34.000"	"27.000"	"0.0788645621940389"	"25"	"0.001827"	"0.01538"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"561.82129"	"1122.63530"	"1122.63564"	"-0.30"	"-0.00017"	"4/54"	"4"	"54"	"708406.564575195"	"HCD"	"MS2"	"13.83772"	"37.2"	"100.000"	"84.1755"	"29182"	"29182"	"29162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"29.9"	""	"36.6"	""	"75.7"	"1.1"	"86.3"	"94.9"	""	"572"	"26"	"34.000"	"27.000"	"0.0725046788322401"	"15"	"0.00394"	"0.04325"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDLYDVR"	"[K].iDLYDVR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"P54290; Q8CFG6"	"Voltage-dependent calcium channel subunit alpha-2/delta-1 OS=Rattus norvegicus OX=10116 GN=Cacna2d1 PE=1 SV=1; Voltage-dependent calcium channel subunit alpha-2/delta-2 OS=Rattus norvegicus OX=10116 GN=Cacna2d2 PE=2 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"561.82141"	"1122.63555"	"1122.63564"	"-0.08"	"-0.00005"	"4/54"	"4"	"54"	"535264.516235352"	"HCD"	"MS2"	"8.105783"	"27.3"	"100.000"	"84.2532"	"29242"	"29242"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"27.0"	""	"28.1"	""	"50.7"	""	"64.6"	"67.4"	""	"572"	"26"	"34.000"	"27.000"	"0.080235402045419"	"15"	"0.003704"	"0.04015"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"562.30054"	"1123.59380"	"1123.59450"	"-0.63"	"-0.00035"	"10/64"	"10"	"64"	"6597693.58599854"	"HCD"	"MS2"	"26.32093"	"340.7"	"100.000"	"49.5098"	"15119"	"15119"	"15103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"485.0"	""	"398.2"	""	"420.8"	""	"533.8"	""	"568.5"	"828.4"	""	"594"	"28"	"34.000"	"27.000"	"0.0459998535817007"	"24"	"0.0001991"	"0.003727"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"562.30054"	"1123.59380"	"1123.59450"	"-0.63"	"-0.00035"	"11/64"	"11"	"64"	"7157573.84710693"	"HCD"	"MS2"	"22.43113"	"359.8"	"100.000"	"49.2232"	"15037"	"15037"	"15022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"532.1"	""	"409.8"	""	"448.6"	""	"597.6"	""	"600.3"	"823.5"	""	"594"	"25"	"34.000"	"27.000"	"0.0919933531867325"	"26"	"0.0004582"	"0.006425"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"562.30090"	"1123.59453"	"1123.59450"	"0.02"	"0.00001"	"6/64"	"6"	"64"	"4408234.65814209"	"HCD"	"MS2"	"3.125345"	"216.2"	"100.000"	"49.5291"	"15162"	"15162"	"15143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"342.0"	""	"255.9"	""	"306.7"	""	"352.7"	""	"382.4"	"408.3"	""	"627"	"33"	"34.000"	"27.000"	"0.0141005984509046"	"24"	"0.0001991"	"0.003864"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEGISFR"	"[K].aDEGISFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"562.30103"	"1123.59477"	"1123.59450"	"0.24"	"0.00014"	"6/64"	"6"	"64"	"5722197.91125488"	"HCD"	"MS2"	"2.691135"	"267.4"	"100.000"	"49.7972"	"15236"	"15236"	"15219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"407.6"	""	"317.5"	""	"358.3"	""	"456.4"	""	"481.8"	"515.4"	""	"627"	"33"	"34.000"	"27.000"	"0.0153192514653978"	"26"	"0.0001991"	"0.00509"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPVGYSR"	"[R].tDPVGYSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O35786"	"Chemokine-like receptor 1 OS=Rattus norvegicus OX=10116 GN=Cmklr1 PE=1 SV=1"	"O35786"	"Chemokine-like receptor 1 OS=Rattus norvegicus OX=10116 GN=Cmklr1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.30200"	"1123.59673"	"1123.59450"	"1.98"	"0.00111"	"6/68"	"6"	"68"	"2348717.66638184"	"HCD"	"MS2"	"73.38397"	"162.1"	"100.000"	"32.4078"	"8222"	"8222"	"8204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.1"	""	"200.4"	""	"212.3"	""	"292.1"	""	"304.5"	"317.2"	""	"597"	"5"	"34.000"	"27.000"	"8.72859484786236"	"13"	"0.007717"	"0.09803"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDIYLR"	"[K].sQDIYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"562.31836"	"1123.62944"	"1123.63089"	"-1.29"	"-0.00072"	"5/62"	"5"	"62"	"4198554.6975708"	"HCD"	"MS2"	"13.09109"	"217.2"	"100.000"	"44.3864"	"13043"	"13043"	"13025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"316.8"	""	"291.6"	""	"326.9"	""	"334.5"	"1.2"	"403.2"	"382.7"	""	"552"	"34"	"34.000"	"27.000"	"0.0100904162485222"	"17"	"0.002286"	"0.0218"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQDIYLR"	"[K].sQDIYLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"562.31848"	"1123.62969"	"1123.63089"	"-1.07"	"-0.00060"	"5/62"	"5"	"62"	"5094212.23278809"	"HCD"	"MS2"	"12.73541"	"251.6"	"100.000"	"44.2126"	"13008"	"13008"	"12985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"382.3"	""	"343.2"	""	"361.9"	""	"386.7"	"2.9"	"446.9"	"458.3"	""	"554"	"32"	"34.000"	"27.000"	"0.0183433971525388"	"18"	"0.001951"	"0.01644"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVYPMER"	"[K].tVYPMER.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"F1LR10"	"LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"Q4KM31; F1LR10"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"562.80194"	"1124.59661"	"1124.59715"	"-0.48"	"-0.00027"	"5/58"	"5"	"58"	"1990941.89746094"	"HCD"	"MS2"	"42.63714"	"133.8"	"100.000"	"42.5109"	"12278"	"12278"	"12254"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.2"	""	"164.5"	""	"177.6"	""	"206.6"	"1.0"	"269.6"	"271.1"	""	"514"	"9"	"34.000"	"27.000"	"3.52316613904367"	"13"	"0.008405"	"0.1074"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVYPMER"	"[K].tVYPMER.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"F1LR10"	"LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"Q4KM31; F1LR10"	"LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1; LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"5"	"562.80194"	"1124.59661"	"1124.59715"	"-0.48"	"-0.00027"	"4/58"	"4"	"58"	"2376409.58154297"	"HCD"	"MS2"	"46.19172"	"163.8"	"100.000"	"42.3153"	"12232"	"12232"	"12215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.0"	""	"208.5"	""	"230.9"	""	"242.0"	""	"338.8"	"311.0"	""	"514"	"10"	"34.000"	"27.000"	"2.88358742755605"	"19"	"0.004073"	"0.04396"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEMAR"	"[R].eLFEMAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"562.80237"	"1124.59746"	"1124.59715"	"0.28"	"0.00016"	"4/54"	"4"	"54"	"2003795.36157227"	"HCD"	"MS2"	"40.44096"	"73.0"	"100.000"	"79.2853"	"27203"	"27203"	"27185"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.0"	""	"106.8"	""	"106.5"	""	"94.3"	""	"128.4"	"135.1"	""	"519"	"20"	"34.000"	"27.000"	"0.246114591226583"	"21"	"0.003117"	"0.03441"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"562.81067"	"1124.61406"	"1124.61490"	"-0.75"	"-0.00042"	"5/58"	"5"	"58"	"7116436.17565918"	"HCD"	"MS2"	"37.43654"	"406.9"	"100.000"	"48.0830"	"14578"	"14578"	"14561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"514.3"	""	"414.3"	""	"503.8"	""	"712.9"	""	"866.0"	"855.1"	""	"491"	"19"	"33.000"	"26.000"	"0.299261946536055"	"15"	"0.003786"	"0.04099"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"562.81067"	"1124.61406"	"1124.61490"	"-0.75"	"-0.00042"	"5/58"	"5"	"58"	"4665569.97479248"	"HCD"	"MS2"	"49.98297"	"212.0"	"100.000"	"48.0629"	"14531"	"14531"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"352.4"	""	"283.7"	""	"290.5"	""	"320.7"	"4.7"	"379.7"	"374.7"	""	"491"	"36"	"33.000"	"26.000"	"0.00631032164669756"	"25"	"0.0001991"	"0.00528"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"562.81073"	"1124.61418"	"1124.61490"	"-0.64"	"-0.00036"	"4/58"	"4"	"58"	"7548309.39025879"	"HCD"	"MS2"	"32.64898"	"422.7"	"100.000"	"48.3548"	"14650"	"14650"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"546.4"	""	"471.1"	""	"487.3"	""	"772.8"	""	"873.4"	"865.4"	""	"491"	"21"	"33.000"	"26.000"	"0.209436077991318"	"17"	"0.002799"	"0.02939"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILYDER"	"[K].sILYDER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"562.81085"	"1124.61443"	"1124.61490"	"-0.42"	"-0.00024"	"5/58"	"5"	"58"	"4756317.31365967"	"HCD"	"MS2"	"35.40103"	"211.4"	"100.000"	"47.8027"	"14463"	"14463"	"14442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"378.0"	""	"273.6"	""	"283.8"	""	"315.4"	"1.7"	"362.7"	"385.4"	""	"487"	"36"	"33.000"	"26.000"	"0.00552712091433711"	""	"0.001348"	"0.01073"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGTGSFGR"	"[K].tLGTGSFGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"562.81537"	"1124.62346"	"1124.62614"	"-2.38"	"-0.00134"	"8/74"	"8"	"74"	"2650178.36572266"	"HCD"	"MS2"	"15.35362"	"156.5"	"100.000"	"46.2656"	"13841"	"13841"	"13831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.4"	""	"197.8"	""	"198.1"	""	"242.5"	"2.0"	"273.2"	"357.6"	""	"473"	"20"	"33.000"	"26.000"	"0.226376397861231"	"15"	"9.9E-05"	"0.001001"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGTGSFGR"	"[K].tLGTGSFGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"562.81549"	"1124.62370"	"1124.62614"	"-2.16"	"-0.00122"	"6/74"	"6"	"74"	"2944751.18707275"	"HCD"	"MS2"	"14.89071"	"183.9"	"100.000"	"46.4809"	"13893"	"13893"	"13878"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"264.3"	""	"229.3"	""	"229.3"	""	"302.1"	"0.7"	"304.0"	"413.0"	""	"473"	"18"	"33.000"	"26.000"	"0.339493250988139"	"16"	"0.0001686"	"0.001433"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGTGSFGR"	"[K].tLGTGSFGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"562.81567"	"1124.62407"	"1124.62614"	"-1.84"	"-0.00103"	"8/74"	"8"	"74"	"2777859.93017578"	"HCD"	"MS2"	"23.00607"	"167.6"	"100.000"	"46.5169"	"13906"	"13906"	"13900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"229.5"	""	"226.2"	""	"200.9"	""	"269.0"	""	"275.0"	"389.7"	""	"488"	"22"	"33.000"	"26.000"	"0.140084416778588"	"16"	"0.0001686"	"0.001539"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGTGSFGR"	"[K].tLGTGSFGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2;cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P27791; P68182"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2; cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"562.81647"	"1124.62566"	"1124.62614"	"-0.43"	"-0.00024"	"8/74"	"8"	"74"	"2967422.48150635"	"HCD"	"MS2"	"37.94571"	"180.8"	"100.000"	"46.1557"	"13797"	"13797"	"13779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.2"	""	"226.9"	""	"245.0"	""	"292.3"	"3.7"	"295.8"	"384.5"	""	"480"	"23"	"33.000"	"26.000"	"0.12566410478058"	"20"	"9.9E-05"	"0.0008102"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGIDPPR"	"[K].qIGIDPPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"562.83838"	"1124.66948"	"1124.66252"	"6.19"	"0.00348"	"7/70"	"7"	"70"	"3764852.55474854"	"HCD"	"MS2"	"21.94139"	"223.3"	"100.000"	"50.5933"	"15561"	"15561"	"15542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"316.0"	""	"289.6"	""	"311.0"	""	"356.4"	""	"426.6"	"418.1"	""	"292"	"14"	"31.000"	"24.000"	"0.560212578418727"	"13"	"0.006577"	"0.08156"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYPYSPR"	"[K].nYPYSPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"563.29706"	"1125.58684"	"1125.58902"	"-1.94"	"-0.00109"	"4/60"	"4"	"60"	"1844646.50384521"	"HCD"	"MS2"	"61.75018"	"147.9"	"100.000"	"35.6904"	"9515"	"9515"	"9491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.8"	""	"190.6"	""	"190.4"	""	"248.4"	"0.8"	"297.6"	"265.7"	""	"488"	"17"	"33.000"	"26.000"	"0.450183762279791"	"16"	"0.004937"	"0.06105"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGATLEHR"	"[K].lGATLEHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CGV7"	"Thiamine-triphosphatase OS=Rattus norvegicus OX=10116 GN=Thtpa PE=2 SV=3"	"Q8CGV7"	"Thiamine-triphosphatase OS=Rattus norvegicus OX=10116 GN=Thtpa PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"375.89063"	"1125.65732"	"1125.65777"	"-0.40"	"-0.00015"	"9/60"	"9"	"60"	"1611352.99908447"	"HCD"	"MS2"	"30.73144"	"73.4"	"100.000"	"33.1977"	"8543"	"8543"	"8521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.6"	""	"100.2"	""	"108.6"	""	"117.9"	"0.8"	"148.2"	"140.9"	""	"362"	"24"	"32.000"	"25.000"	"0.0709052797565088"	"14"	"0.0001991"	"0.005221"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"376.19223"	"1126.56214"	"1126.56398"	"-1.64"	"-0.00062"	"9/72"	"9"	"72"	"4041161.04046631"	"HCD"	"MS2"	"12.50039"	"47.6"	"100.000"	"37.0376"	"10059"	"10059"	"10036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.6"	""	"71.9"	""	"65.1"	""	"80.0"	""	"85.5"	"85.2"	"NoQuanLabels"	"401"	"27"	"33.000"	"26.000"	"0.0429649565524571"	"15"	"0.00511"	"0.06507"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"376.19226"	"1126.56223"	"1126.56398"	"-1.56"	"-0.00058"	"8/72"	"8"	"72"	"3477816.05743408"	"HCD"	"MS2"	"54.79838"	"42.8"	"100.000"	"36.7156"	"9928"	"9928"	"9902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"48.3"	""	"66.3"	""	"74.2"	"0.9"	"77.9"	"75.6"	"NoQuanLabels"	"401"	"28"	"33.000"	"26.000"	"0.034049785231858"	"18"	"0.002588"	"0.02633"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"563.78485"	"1126.56243"	"1126.56398"	"-1.38"	"-0.00078"	"4/72"	"4"	"72"	"2567082.38494873"	"HCD"	"MS2"	"57.73183"	"125.6"	"100.000"	"36.9277"	"10052"	"10052"	"10026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.2"	""	"174.0"	""	"165.8"	""	"178.6"	"2.2"	"268.4"	"243.9"	"NoQuanLabels"	"401"	"19"	"33.000"	"26.000"	"0.271715477176383"	"19"	"0.008758"	"0.111"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"376.19235"	"1126.56250"	"1126.56398"	"-1.31"	"-0.00049"	"7/72"	"7"	"72"	"2396169.66442871"	"HCD"	"MS2"	"58.77656"	"38.7"	"100.000"	"36.5759"	"9909"	"9909"	"9883"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.3"	""	"48.4"	""	"52.2"	""	"65.6"	""	"75.0"	"78.4"	"NoQuanLabels"	"401"	"21"	"33.000"	"26.000"	"0.162972518490902"	"14"	"0.003904"	"0.04275"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].LHVDPENFR.[L]"	""	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"376.19238"	"1126.56260"	"1126.56398"	"-1.23"	"-0.00046"	"8/72"	"8"	"72"	"5566443.9609375"	"HCD"	"MS2"	"8.795628"	"38.1"	"100.000"	"36.8657"	"10027"	"10027"	"10010"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.3"	"2.7"	"55.4"	""	"58.1"	""	"52.9"	""	"67.1"	"76.0"	"NoQuanLabels"	"413"	"25"	"33.000"	"26.000"	"0.0629390315358178"	"17"	"0.006267"	"0.0777"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMFTVNR"	"[K].nmFTVNR.[D]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"563.79712"	"1126.58696"	"1126.58764"	"-0.61"	"-0.00034"	"6/60"	"6"	"60"	"1996334.68682861"	"HCD"	"MS2"	"11.5089"	"120.3"	"100.000"	"34.0936"	"8870"	"8870"	"8853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.0"	""	"132.8"	""	"168.0"	""	"258.2"	"1.2"	"204.1"	"212.9"	""	"403"	"12"	"33.000"	"26.000"	"1.21976186262914"	"18"	"0.008926"	"0.1158"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMFTVNR"	"[K].nmFTVNR.[D]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"563.79773"	"1126.58818"	"1126.58764"	"0.48"	"0.00027"	"6/60"	"6"	"60"	"1880349.04064941"	"HCD"	"MS2"	"0"	"110.9"	"100.000"	"34.0129"	"8874"	"8874"	"8853"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.6"	""	"138.0"	""	"149.9"	""	"236.8"	"3.0"	"180.6"	"190.2"	""	"401"	"10"	"33.000"	"26.000"	"1.8582937958756"	"18"	"0.007379"	"0.09325"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTLPLPAAS"	"[R].qTLPLPAAS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY19"	"Atypical kinase COQ8B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq8b PE=1 SV=1"	"Q6AY19"	"Atypical kinase COQ8B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Coq8b PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"563.83789"	"1126.66850"	"1126.66694"	"1.39"	"0.00078"	"4/78"	"4"	"78"	"238631.052307129"	"HCD"	"MS2"	"18.53816"	"16.1"	"100.000"	"86.2615"	"30054"	"30054"	"30030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"17.7"	""	"20.1"	""	"28.8"	""	"30.5"	"30.5"	""	"265"	"24"	"31.000"	"24.000"	"0.0515484817117421"	""	"0.00394"	"0.04307"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"564.29401"	"1127.58074"	"1127.58942"	"-7.70"	"-0.00434"	"6/68"	"6"	"68"	"4451082.45379639"	"HCD"	"MS2"	"27.84912"	"231.7"	"100.000"	"30.5586"	"7448"	"7448"	"7425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"363.1"	""	"304.7"	""	"317.4"	""	"374.0"	""	"393.9"	"441.5"	""	"410"	"34"	"33.000"	"26.000"	"0.00823671162240327"	"18"	"0.0001991"	"0.0027"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"564.29480"	"1127.58232"	"1127.58942"	"-6.29"	"-0.00355"	"6/68"	"6"	"68"	"5107990.91265869"	"HCD"	"MS2"	"11.85664"	"265.2"	"100.000"	"30.4477"	"7443"	"7443"	"7424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"407.4"	""	"323.0"	""	"375.4"	""	"429.3"	""	"468.9"	"510.8"	""	"415"	"28"	"33.000"	"26.000"	"0.0323607144336593"	"17"	"0.001261"	"0.01029"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"564.29553"	"1127.58379"	"1127.58942"	"-4.99"	"-0.00282"	"6/68"	"6"	"68"	"2821899.98669434"	"HCD"	"MS2"	"0"	"170.9"	"100.000"	"30.8292"	"7553"	"7553"	"7541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"257.5"	""	"211.3"	""	"247.9"	""	"262.9"	""	"290.7"	"352.1"	""	"415"	"31"	"33.000"	"26.000"	"0.0155961750508778"	"22"	"0.0001991"	"0.005895"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLSSER"	"[K].sGYLSSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"564.29620"	"1127.58513"	"1127.58942"	"-3.80"	"-0.00214"	"6/68"	"6"	"68"	"2286378.42272949"	"HCD"	"MS2"	"0"	"142.6"	"100.000"	"30.7181"	"7546"	"7546"	"7534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.6"	""	"172.6"	""	"185.0"	""	"228.9"	""	"263.1"	"296.1"	""	"419"	"31"	"33.000"	"26.000"	"0.0171863648537097"	"22"	"0.0005161"	"0.006763"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPYYATR"	"[R].qPYYATR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"564.30450"	"1127.60173"	"1127.60467"	"-2.61"	"-0.00147"	"6/60"	"6"	"60"	"2635573.58978271"	"HCD"	"MS2"	"22.97998"	"152.0"	"100.000"	"30.3332"	"7397"	"7397"	"7373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.4"	""	"187.0"	""	"220.9"	""	"244.5"	""	"246.7"	"298.7"	""	"425"	"18"	"33.000"	"26.000"	"0.328366568401913"	""	"0.004213"	"0.0466"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPYYATR"	"[R].qPYYATR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"564.30566"	"1127.60405"	"1127.60467"	"-0.55"	"-0.00031"	"5/60"	"5"	"60"	"2892322.80633545"	"HCD"	"MS2"	"13.63019"	"154.9"	"100.000"	"30.4097"	"7387"	"7387"	"7371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.4"	""	"179.7"	""	"236.8"	""	"254.1"	""	"265.5"	"293.8"	""	"450"	"20"	"33.000"	"26.000"	"0.220385246716957"	"22"	"0.002559"	"0.02556"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGAQDGVR"	"[R].vPGAQDGVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"564.32196"	"1127.63664"	"1127.63704"	"-0.35"	"-0.00020"	"6/72"	"6"	"72"	"1960120.30725098"	"HCD"	"MS2"	"0"	"81.7"	"100.000"	"32.6465"	"8281"	"8281"	"8262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.8"	""	"125.3"	""	"116.3"	""	"122.1"	""	"151.3"	"149.3"	""	"408"	"25"	"33.000"	"26.000"	"0.0680189882037"	"21"	"0.0001686"	"0.001638"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPGAQDGVR"	"[R].vPGAQDGVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"564.32227"	"1127.63725"	"1127.63704"	"0.19"	"0.00011"	"6/72"	"6"	"72"	"2734964.01092529"	"HCD"	"MS2"	"14.86875"	"96.9"	"100.000"	"32.5847"	"8293"	"8293"	"8269"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.1"	""	"121.4"	""	"150.2"	""	"156.3"	""	"176.2"	"187.5"	""	"400"	"27"	"33.000"	"26.000"	"0.0369003083835895"	"23"	"0.0001991"	"0.003132"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYVIYR"	"[K].qGYVIYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32318"	"1127.63909"	"1127.64106"	"-1.75"	"-0.00099"	"5/62"	"5"	"62"	"2242440.35339355"	"HCD"	"MS2"	"0"	"128.3"	"100.000"	"46.7939"	"14016"	"14016"	"13991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.9"	""	"188.8"	""	"193.8"	""	"209.0"	""	"214.6"	"211.8"	""	"399"	"28"	"32.000"	"26.000"	"0.0343512780709708"	"14"	"0.002673"	"0.02807"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYVIYR"	"[K].qGYVIYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32355"	"1127.63982"	"1127.64106"	"-1.10"	"-0.00062"	"5/62"	"5"	"62"	"4301569.70874023"	"HCD"	"MS2"	"9.197193"	"199.7"	"100.000"	"46.6093"	"13978"	"13978"	"13961"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.2"	""	"281.4"	""	"309.3"	""	"302.5"	""	"362.0"	"352.9"	""	"422"	"25"	"33.000"	"26.000"	"0.0647563639550535"	"15"	"0.003357"	"0.03748"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYVIYR"	"[K].qGYVIYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32361"	"1127.63994"	"1127.64106"	"-0.99"	"-0.00056"	"5/62"	"5"	"62"	"2828422.18884277"	"HCD"	"MS2"	"35.44712"	"173.9"	"100.000"	"46.8938"	"14093"	"14093"	"14075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.8"	""	"247.7"	""	"254.9"	""	"250.8"	""	"292.4"	"318.5"	""	"422"	"20"	"33.000"	"26.000"	"0.206197053621676"	"14"	"0.004234"	"0.04927"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGYVYR"	"[R].qIGYVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"564.32367"	"1127.64006"	"1127.64106"	"-0.88"	"-0.00050"	"5/62"	"5"	"62"	"2532204.88372803"	"HCD"	"MS2"	"3.726068"	"134.7"	"100.000"	"50.1605"	"15384"	"15384"	"15369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.0"	""	"224.9"	""	"174.8"	""	"201.5"	""	"254.9"	"252.8"	""	"422"	"29"	"33.000"	"26.000"	"0.0261988636901999"	"21"	"0.001615"	"0.01446"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGYVYR"	"[R].qIGYVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"564.32373"	"1127.64018"	"1127.64106"	"-0.78"	"-0.00044"	"5/62"	"5"	"62"	"2284097.73547363"	"HCD"	"MS2"	"3.131915"	"129.9"	"100.000"	"49.8556"	"15295"	"15295"	"15276"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.1"	""	"215.3"	""	"165.2"	""	"185.8"	""	"252.9"	"243.7"	""	"418"	"26"	"33.000"	"26.000"	"0.0486571072851986"	"17"	"0.002328"	"0.02207"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYVIYR"	"[K].qGYVIYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32373"	"1127.64018"	"1127.64106"	"-0.78"	"-0.00044"	"5/62"	"5"	"62"	"4100873.51739502"	"HCD"	"MS2"	"9.86291"	"206.2"	"100.000"	"47.0874"	"14134"	"14134"	"14116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.1"	""	"277.7"	""	"300.1"	""	"322.7"	""	"390.1"	"375.3"	""	"418"	"25"	"33.000"	"26.000"	"0.0647360633536265"	"14"	"0.004392"	"0.05167"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGYVYR"	"[R].qIGYVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"564.32422"	"1127.64116"	"1127.64106"	"0.09"	"0.00005"	"5/62"	"5"	"62"	"6443598.71343994"	"HCD"	"MS2"	"2.742424"	"305.6"	"100.000"	"49.5635"	"15176"	"15176"	"15157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"423.8"	""	"528.8"	""	"376.2"	""	"443.6"	""	"592.5"	"533.2"	""	"418"	"27"	"33.000"	"26.000"	"0.0416050727848321"	"21"	"0.002673"	"0.0279"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGYVYR"	"[R].qIGYVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"564.32422"	"1127.64116"	"1127.64106"	"0.09"	"0.00005"	"5/62"	"5"	"62"	"6137757.98693848"	"HCD"	"MS2"	"1.496405"	"298.7"	"100.000"	"49.8662"	"15264"	"15264"	"15250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"421.2"	""	"498.6"	""	"367.4"	""	"448.7"	"2.0"	"559.7"	"532.7"	""	"418"	"27"	"33.000"	"26.000"	"0.0418934653719318"	"20"	"0.002559"	"0.02597"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIETPGIR"	"[K].iIETPGIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"564.35193"	"1127.69658"	"1127.69857"	"-1.77"	"-0.00100"	"5/58"	"5"	"58"	"507081.160217285"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"67.5935"	"22493"	"22493"	"22470"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"34.4"	""	"36.5"	""	"50.4"	""	"44.7"	"53.9"	""	"226"	"27"	"30.000"	"23.000"	"0.0221859711282473"	"19"	"0.002525"	"0.02457"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIETPGIR"	"[K].iIETPGIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"564.35260"	"1127.69792"	"1127.69857"	"-0.58"	"-0.00033"	"5/58"	"5"	"58"	"1317572.54003906"	"HCD"	"MS2"	"9.006533"	"53.9"	"100.000"	"67.8066"	"22548"	"22548"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.5"	""	"55.8"	""	"64.4"	""	"107.6"	"0.2"	"108.1"	"108.2"	""	"229"	"16"	"30.000"	"23.000"	"0.284318740556343"	"16"	"0.003704"	"0.04016"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIETPGIR"	"[K].iIETPGIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.35266"	"1127.69805"	"1127.69857"	"-0.47"	"-0.00026"	"5/58"	"5"	"58"	"1352583.92370605"	"HCD"	"MS2"	"3.663644"	"50.4"	"100.000"	"67.8931"	"22614"	"22614"	"22595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.2"	""	"47.7"	""	"61.8"	""	"91.4"	""	"110.4"	"102.4"	""	"229"	"15"	"30.000"	"23.000"	"0.387084237455849"	"13"	"0.009514"	"0.1265"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIETPGIR"	"[K].iIETPGIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"564.35278"	"1127.69829"	"1127.69857"	"-0.25"	"-0.00014"	"5/58"	"5"	"58"	"359177.835205078"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"67.5002"	"22424"	"22424"	"22402"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.3"	""	"33.5"	""	"31.8"	""	"50.7"	""	"45.0"	"50.4"	""	"226"	"24"	"30.000"	"23.000"	"0.0401863389982954"	"19"	"0.002462"	"0.02333"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMAGYSTR"	"[K].nMAGYSTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D6"	"Nostrin OS=Rattus norvegicus OX=10116 GN=Nostrin PE=1 SV=1"	"Q5I0D6"	"Nostrin OS=Rattus norvegicus OX=10116 GN=Nostrin PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"564.78680"	"1128.56633"	"1128.56691"	"-0.51"	"-0.00029"	"6/72"	"6"	"72"	"1062748.93804932"	"HCD"	"MS2"	"47.66154"	"107.5"	"100.000"	"28.8391"	"6793"	"6793"	"6764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.4"	""	"120.9"	""	"123.5"	""	"191.9"	""	"233.6"	"236.9"	""	"326"	"15"	"32.000"	"25.000"	"0.478836893269729"	"21"	"0.00192"	"0.01607"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGVENLR"	"[R].vIGVENLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE0"	"Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1"	"Q6UPE0"	"Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"564.85022"	"1128.69316"	"1128.69382"	"-0.59"	"-0.00033"	"6/60"	"6"	"60"	"476104.828491211"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"67.4794"	"22416"	"22416"	"22391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"44.4"	""	"39.1"	""	"52.2"	"1.7"	"47.5"	"51.9"	""	"343"	"16"	"32.000"	"25.000"	"0.477819780420006"	"22"	"0.002189"	"0.02092"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIGVENLR"	"[R].vIGVENLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE0"	"Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1"	"Q6UPE0"	"Choline dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Chdh PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"564.85034"	"1128.69341"	"1128.69382"	"-0.37"	"-0.00021"	"5/60"	"5"	"60"	"302735.57421875"	"HCD"	"MS2"	"23.52204"	"21.0"	"100.000"	"66.9983"	"22220"	"22220"	"22192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"29.4"	""	"29.6"	""	"31.8"	""	"34.2"	"42.4"	""	"343"	"18"	"32.000"	"25.000"	"0.258978746439151"	"18"	"0.005832"	"0.07225"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVIAALR"	"[R].eQVIAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"564.85046"	"1128.69365"	"1128.69382"	"-0.15"	"-0.00009"	"6/68"	"6"	"68"	"862392.363769531"	"HCD"	"MS2"	"58.20951"	"48.2"	"100.000"	"65.0259"	"21420"	"21420"	"21394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.2"	""	"58.3"	""	"56.3"	""	"88.0"	""	"96.5"	"99.7"	""	"341"	"26"	"32.000"	"25.000"	"0.0468515953103959"	""	"0.003317"	"0.03678"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVIAALR"	"[R].eQVIAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"564.85059"	"1128.69390"	"1128.69382"	"0.06"	"0.00004"	"7/68"	"7"	"68"	"730569.804016113"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"64.7043"	"21289"	"21289"	"21263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"45.2"	""	"53.5"	""	"71.6"	"0.3"	"84.2"	"86.9"	""	"376"	"32"	"32.000"	"25.000"	"0.0117803406558399"	""	"0.0001991"	"0.002115"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVIAALR"	"[R].eQVIAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"564.85114"	"1128.69499"	"1128.69382"	"1.04"	"0.00058"	"6/68"	"6"	"68"	"693952.184387207"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"64.6571"	"21304"	"21304"	"21275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.5"	""	"46.5"	""	"43.6"	""	"70.6"	""	"68.7"	"71.4"	""	"376"	"44"	"32.000"	"25.000"	"0.000792789426445735"	""	"0.0001991"	"0.002378"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNELVIR"	"[K].rNELVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"1"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"376.90604"	"1128.70356"	"1128.70506"	"-1.33"	"-0.00050"	"6/60"	"6"	"60"	"4956218.43756104"	"HCD"	"MS2"	"33.28275"	"217.4"	"100.000"	"29.1678"	"6926"	"6926"	"6901"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"316.5"	""	"348.1"	""	"321.1"	""	"297.2"	""	"396.2"	"381.9"	""	"322"	"38"	"32.000"	"25.000"	"0.00241449258515882"	""	"0.001261"	"0.009632"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNELVIR"	"[K].rNELVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"1"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"376.90622"	"1128.70411"	"1128.70506"	"-0.84"	"-0.00032"	"6/60"	"6"	"60"	"4852452.54937744"	"HCD"	"MS2"	"32.95385"	"213.2"	"100.000"	"29.3338"	"6953"	"6953"	"6930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"320.3"	""	"321.2"	""	"316.8"	""	"300.8"	""	"383.2"	"380.8"	""	"322"	"34"	"32.000"	"25.000"	"0.00658909662165316"	""	"0.002711"	"0.02902"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"376.90906"	"1128.71262"	"1128.71411"	"-1.32"	"-0.00050"	"5/56"	"5"	"56"	"1509770.95983887"	"HCD"	"MS2"	"20.47731"	"97.8"	"100.000"	"32.2313"	"8151"	"8151"	"8131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.5"	""	"131.2"	""	"129.3"	""	"161.8"	""	"191.5"	"200.4"	""	"361"	"19"	"32.000"	"25.000"	"0.214524652052382"	"20"	"0.001615"	"0.01453"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"376.90912"	"1128.71280"	"1128.71411"	"-1.16"	"-0.00044"	"6/56"	"6"	"56"	"2089435.47381592"	"HCD"	"MS2"	"4.548165"	"131.2"	"100.000"	"32.3045"	"8144"	"8144"	"8119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.1"	""	"160.7"	""	"171.3"	""	"241.0"	""	"273.4"	"256.0"	""	"361"	"17"	"32.000"	"25.000"	"0.357665628157821"	"18"	"0.008289"	"0.1051"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAQAPVK"	"[K].gAQAPVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"0.2564"	"0.0000"	"1"	"1"	"1"	"564.86005"	"1128.71282"	"1128.71411"	"-1.15"	"-0.00065"	"6/58"	"6"	"58"	"6771526.89404297"	"HCD"	"MS2"	"0"	"451.4"	"100.000"	"29.6852"	"7096"	"7096"	"7077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"634.7"	""	"672.2"	""	"649.2"	""	"884.8"	""	"836.5"	"598.3"	""	"361"	"39"	"32.000"	"25.000"	"0.00212557878220506"	""	"0.00192"	"0.01598"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"564.86023"	"1128.71318"	"1128.71411"	"-0.83"	"-0.00047"	"10/56"	"10"	"56"	"5675747.46191406"	"HCD"	"MS2"	"0"	"354.1"	"100.000"	"31.9515"	"8003"	"8003"	"7985"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"415.5"	""	"434.8"	""	"435.8"	""	"633.3"	""	"709.9"	"735.9"	""	"361"	"32"	"32.000"	"25.000"	"0.0108762005286422"	""	"0.001615"	"0.01381"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"376.90933"	"1128.71344"	"1128.71411"	"-0.59"	"-0.00022"	"5/56"	"5"	"56"	"2920353.04669189"	"HCD"	"MS2"	"31.52119"	"172.2"	"100.000"	"31.9076"	"8022"	"8022"	"8006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.5"	""	"205.6"	""	"212.2"	""	"293.8"	""	"351.9"	"357.6"	""	"361"	"18"	"32.000"	"25.000"	"0.284103907036153"	"17"	"0.002462"	"0.02305"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"564.86041"	"1128.71355"	"1128.71411"	"-0.50"	"-0.00028"	"10/56"	"10"	"56"	"6691476.37548828"	"HCD"	"MS2"	"0"	"382.4"	"100.000"	"32.2518"	"8122"	"8122"	"8109"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"443.3"	""	"453.2"	""	"454.7"	""	"682.6"	""	"758.1"	"847.9"	""	"361"	"31"	"32.000"	"25.000"	"0.0156486618574358"	"25"	"0.001488"	"0.01215"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"564.86047"	"1128.71367"	"1128.71411"	"-0.39"	"-0.00022"	"6/56"	"6"	"56"	"594829.901428223"	"HCD"	"MS2"	"11.48247"	"48.1"	"100.000"	"32.4307"	"8231"	"8231"	"8216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.6"	""	"62.6"	""	"61.6"	""	"88.7"	""	"96.0"	"97.1"	""	"358"	"30"	"32.000"	"25.000"	"0.0194918486706685"	"24"	"0.001348"	"0.01115"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAQAPVK"	"[K].gAQAPVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"0.2683"	"0.0000"	"1"	"1"	"1"	"564.86047"	"1128.71367"	"1128.71411"	"-0.39"	"-0.00022"	"6/58"	"6"	"58"	"6562311.40771484"	"HCD"	"MS2"	"0"	"463.7"	"100.000"	"29.5095"	"7065"	"7065"	"7044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"636.7"	""	"673.1"	""	"654.1"	""	"927.8"	""	"858.3"	"641.8"	""	"358"	"41"	"32.000"	"25.000"	"0.00140557178595203"	""	"0.001615"	"0.01484"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"564.86053"	"1128.71379"	"1128.71411"	"-0.29"	"-0.00016"	"6/56"	"6"	"56"	"6321680.40185547"	"HCD"	"MS2"	"0"	"404.0"	"100.000"	"31.8412"	"7995"	"7995"	"7979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"515.6"	""	"500.9"	""	"487.6"	""	"706.1"	""	"814.0"	"820.7"	""	"355"	"30"	"32.000"	"25.000"	"0.0162629136996655"	"25"	"0.001348"	"0.01129"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"564.86053"	"1128.71379"	"1128.71411"	"-0.29"	"-0.00016"	"10/56"	"10"	"56"	"6795963.06768799"	"HCD"	"MS2"	"0"	"414.0"	"100.000"	"32.1346"	"8112"	"8112"	"8098"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"482.2"	""	"476.5"	""	"484.0"	""	"720.1"	""	"866.6"	"907.9"	""	"355"	"31"	"32.000"	"25.000"	"0.0157470192136738"	"25"	"0.001348"	"0.01127"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAANAPK"	"[K].vAANAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"376.90945"	"1128.71381"	"1128.71411"	"-0.27"	"-0.00010"	"5/56"	"5"	"56"	"2669093.58416748"	"HCD"	"MS2"	"44.15562"	"158.6"	"100.000"	"31.9882"	"8018"	"8018"	"7995"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.4"	""	"202.1"	""	"202.5"	""	"277.9"	"0.5"	"314.8"	"305.8"	""	"355"	"17"	"32.000"	"25.000"	"0.346097416457053"	"18"	"0.00296"	"0.03173"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPHSAGR"	"[K].yLPHSAGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"377.21490"	"1129.63016"	"1129.63156"	"-1.24"	"-0.00047"	"6/56"	"6"	"56"	"12200881.9995117"	"HCD"	"MS2"	"8.777977"	"158.2"	"51.022"	"25.6834"	"5504"	"5504"	"5492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.7"	""	"209.3"	""	"275.3"	""	"265.8"	""	"308.3"	"246.4"	""	"543"	"34"	"34.000"	"27.000"	"0.0120439746827384"	"26"	"0.001872"	"0.01563"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPHSAGR"	"[K].yLPHSAGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"377.21509"	"1129.63071"	"1129.63156"	"-0.75"	"-0.00028"	"6/56"	"6"	"56"	"15282525.6142578"	"HCD"	"MS2"	"6.198728"	"169.0"	"44.376"	"25.5181"	"5476"	"5476"	"5458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.8"	""	"233.4"	""	"301.0"	""	"277.1"	""	"297.2"	"267.6"	""	"543"	"33"	"34.000"	"27.000"	"0.0139562851404629"	"25"	"0.002035"	"0.01783"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPHSAGR"	"[K].yLPHSAGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"565.31934"	"1129.63140"	"1129.63156"	"-0.14"	"-0.00008"	"7/56"	"7"	"56"	"1230838.4730835"	"HCD"	"MS2"	"8.312392"	"68.3"	"100.000"	"25.5342"	"5483"	"5483"	"5458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.2"	"2.1"	"97.3"	""	"102.3"	""	"117.5"	""	"124.5"	"112.0"	""	"545"	"26"	"34.000"	"27.000"	"0.0637333147534674"	"27"	"0.0001991"	"0.005502"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPHSAGR"	"[K].yLPHSAGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"565.31940"	"1129.63152"	"1129.63156"	"-0.04"	"-0.00002"	"6/56"	"6"	"56"	"1833100.23272705"	"HCD"	"MS2"	"6.39308"	"92.2"	"100.000"	"25.6054"	"5473"	"5473"	"5446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.9"	""	"139.4"	""	"154.9"	""	"136.8"	"1.1"	"159.1"	"146.4"	""	"545"	"27"	"34.000"	"27.000"	"0.0516852363530037"	"27"	"0.0001991"	"0.002935"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.21671"	"1129.63556"	"1129.63659"	"-0.91"	"-0.00034"	"7/58"	"7"	"58"	"4027960.67736816"	"HCD"	"MS2"	"38.56384"	"295.7"	"100.000"	"18.7939"	"2860"	"2860"	"2840"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"355.4"	""	"330.1"	""	"464.1"	""	"505.2"	""	"575.7"	"576.7"	""	"567"	"19"	"34.000"	"27.000"	"0.352819892437188"	"14"	"0.002834"	"0.03065"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"377.21683"	"1129.63593"	"1129.63659"	"-0.59"	"-0.00022"	"6/58"	"6"	"58"	"4045221.31256104"	"HCD"	"MS2"	"20.18641"	"310.0"	"100.000"	"18.8114"	"2828"	"2828"	"2811"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"382.5"	""	"344.8"	""	"471.6"	""	"525.2"	""	"603.3"	"613.2"	""	"569"	"13"	"34.000"	"27.000"	"1.2796236871714"	"13"	"0.00511"	"0.06565"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNGTGGK"	"[R].hnGTGGk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.32202"	"1129.63677"	"1129.63659"	"0.15"	"0.00009"	"6/58"	"6"	"58"	"692957.030273438"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"18.8664"	"2850"	"2850"	"2827"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.1"	""	"80.7"	""	"111.6"	""	"119.5"	"1.0"	"138.0"	"127.9"	""	"571"	"13"	"34.000"	"27.000"	"1.30498678135047"	"13"	"0.005832"	"0.0716"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSGPPAK"	"[R].dSGPPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EPJ0"	"Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Rattus norvegicus OX=10116 GN=Nucks1 PE=1 SV=1"	"Q9EPJ0"	"Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 OS=Rattus norvegicus OX=10116 GN=Nucks1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"565.33429"	"1129.66130"	"1129.66174"	"-0.39"	"-0.00022"	"10/50"	"10"	"50"	"1130378.12786865"	"HCD"	"MS2"	"0"	"99.6"	"100.000"	"27.0848"	"6050"	"6050"	"6039"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.5"	""	"108.5"	""	"120.4"	""	"183.6"	""	"202.7"	"201.7"	""	"549"	"26"	"34.000"	"27.000"	"0.0646461028429454"	"22"	"0.0008247"	"0.007579"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLAEEIR"	"[R].iGLAEEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"565.34283"	"1129.67839"	"1129.67784"	"0.49"	"0.00028"	"12/58"	"12"	"58"	"455056.447143555"	"HCD"	"MS2"	"14.27708"	"27.3"	"100.000"	"73.5916"	"24896"	"24896"	"24873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.6"	""	"31.6"	""	"40.7"	""	"44.1"	""	"51.5"	"55.3"	""	"611"	"27"	"34.000"	"27.000"	"0.0645670901670095"	"24"	"0.0001686"	"0.001624"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLAEEIR"	"[R].iGLAEEIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"565.34290"	"1129.67851"	"1129.67784"	"0.60"	"0.00034"	"6/58"	"6"	"58"	"391637.995422363"	"HCD"	"MS2"	"25.4757"	"25.0"	"100.000"	"73.7033"	"24971"	"24971"	"24944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"31.2"	""	"38.2"	""	"37.5"	"1.7"	"40.6"	"53.7"	""	"611"	"21"	"34.000"	"27.000"	"0.237143494130065"	"23"	"0.0005778"	"0.007125"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSGYNTR"	"[R].gFSGYNTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"565.79279"	"1130.57829"	"1130.57919"	"-0.79"	"-0.00045"	"6/68"	"6"	"68"	"8485614.11517334"	"HCD"	"MS2"	"0"	"439.1"	"100.000"	"35.9474"	"9619"	"9619"	"9605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"744.2"	""	"596.2"	""	"708.8"	""	"634.5"	""	"704.7"	"766.4"	""	"437"	"31"	"33.000"	"26.000"	"0.0157561984201464"	"18"	"0.0001991"	"0.003367"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSSFGGGR"	"[R].aYSSFGGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"565.79297"	"1130.57866"	"1130.57919"	"-0.47"	"-0.00026"	"7/66"	"7"	"66"	"2710935.67901611"	"HCD"	"MS2"	"29.7952"	"163.5"	"100.000"	"36.6788"	"9913"	"9913"	"9887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.7"	""	"263.1"	""	"247.6"	""	"260.6"	""	"254.8"	"274.9"	""	"439"	"33"	"33.000"	"26.000"	"0.0104576601603789"	"17"	"9.9E-05"	"0.001008"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSSFGGGR"	"[R].aYSSFGGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"565.79315"	"1130.57903"	"1130.57919"	"-0.14"	"-0.00008"	"7/66"	"7"	"66"	"2594599.39953613"	"HCD"	"MS2"	"23.82446"	"148.8"	"100.000"	"36.5690"	"9906"	"9906"	"9883"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.9"	""	"232.2"	""	"207.6"	""	"231.2"	""	"243.1"	"261.5"	""	"438"	"33"	"33.000"	"26.000"	"0.010652317804643"	"17"	"0"	"0.0002958"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSGYNTR"	"[R].gFSGYNTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"565.79315"	"1130.57903"	"1130.57919"	"-0.14"	"-0.00008"	"6/68"	"6"	"68"	"8706578.78631592"	"HCD"	"MS2"	"0"	"459.5"	"100.000"	"35.8608"	"9621"	"9621"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"790.4"	""	"614.5"	""	"777.4"	""	"653.5"	"0.1"	"735.5"	"770.4"	""	"438"	"33"	"33.000"	"26.000"	"0.0115996294212273"	"18"	"0.0001991"	"0.0053"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDFYTR"	"[K].sLDFYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"565.80548"	"1130.60369"	"1130.60434"	"-0.58"	"-0.00033"	"5/58"	"5"	"58"	"1803646.81939697"	"HCD"	"MS2"	"15.17356"	"91.2"	"100.000"	"68.9968"	"23064"	"23064"	"23045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.1"	""	"126.1"	""	"122.4"	""	"147.4"	""	"157.6"	"184.6"	""	"542"	"20"	"34.000"	"27.000"	"0.247724688438438"	"19"	"0.002328"	"0.0219"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDFYTR"	"[K].sLDFYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"565.80560"	"1130.60393"	"1130.60434"	"-0.36"	"-0.00021"	"5/58"	"5"	"58"	"5015546.09863281"	"HCD"	"MS2"	"5.315083"	"224.0"	"100.000"	"68.6882"	"22939"	"22939"	"22922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"282.8"	"3.7"	"302.6"	""	"332.2"	""	"392.2"	"2.8"	"380.4"	"425.4"	""	"544"	"27"	"34.000"	"27.000"	"0.0525495382228603"	"20"	"0.00307"	"0.03372"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDFYTR"	"[K].sLDFYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"565.80591"	"1130.60454"	"1130.60434"	"0.18"	"0.00010"	"5/58"	"5"	"58"	"2109611.99951172"	"HCD"	"MS2"	"10.88348"	"102.8"	"100.000"	"68.9310"	"23003"	"23003"	"22986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"127.4"	""	"149.8"	""	"180.3"	""	"177.7"	"195.5"	""	"544"	"20"	"34.000"	"27.000"	"0.259160556614433"	"23"	"0.00307"	"0.03312"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDFYTR"	"[K].sLDFYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"Q6P7Q4"	"Lactoylglutathione lyase OS=Rattus norvegicus OX=10116 GN=Glo1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"565.80597"	"1130.60466"	"1130.60434"	"0.28"	"0.00016"	"5/58"	"5"	"58"	"5044711.12890625"	"HCD"	"MS2"	"1.965375"	"235.0"	"100.000"	"68.6408"	"22887"	"22887"	"22876"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"309.7"	""	"318.2"	""	"342.2"	""	"416.2"	"5.9"	"387.3"	"445.7"	""	"544"	"27"	"34.000"	"27.000"	"0.0519480086330017"	"20"	"0.00329"	"0.03576"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGVPDNR"	"[K].mLGVPDNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"565.81293"	"1130.61858"	"1130.61894"	"-0.32"	"-0.00018"	"5/58"	"5"	"58"	"4418593.92382813"	"HCD"	"MS2"	"10.90409"	"194.2"	"100.000"	"51.7841"	"16076"	"16076"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"286.1"	""	"263.7"	""	"274.1"	""	"302.8"	""	"339.5"	"373.8"	""	"568"	"26"	"34.000"	"27.000"	"0.0668833996626467"	"22"	"0.001615"	"0.0137"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGVPDNR"	"[K].mLGVPDNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"565.81311"	"1130.61894"	"1130.61894"	"0.00"	"0.00000"	"4/58"	"4"	"58"	"6244843.86120605"	"HCD"	"MS2"	"10.32251"	"277.2"	"100.000"	"51.7674"	"16035"	"16035"	"16022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"435.5"	""	"391.0"	""	"434.7"	""	"403.1"	"10.9"	"457.3"	"489.6"	""	"596"	"28"	"34.000"	"27.000"	"0.0517864646967314"	"21"	"0.00192"	"0.01607"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGVPDNR"	"[K].mLGVPDNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"565.81317"	"1130.61907"	"1130.61894"	"0.11"	"0.00006"	"5/58"	"5"	"58"	"5596723.07489014"	"HCD"	"MS2"	"5.013037"	"228.2"	"100.000"	"52.0488"	"16149"	"16149"	"16132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"338.4"	""	"325.8"	""	"320.5"	""	"336.7"	"0.6"	"405.9"	"433.1"	""	"598"	"26"	"34.000"	"27.000"	"0.0681822279528124"	"21"	"0.0001991"	"0.005119"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGVPDNR"	"[K].mLGVPDNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"565.81323"	"1130.61919"	"1130.61894"	"0.22"	"0.00012"	"4/58"	"4"	"58"	"6553289.90960693"	"HCD"	"MS2"	"9.203816"	"275.0"	"100.000"	"51.4841"	"15954"	"15954"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"424.3"	""	"394.8"	""	"403.4"	""	"400.0"	"10.1"	"476.4"	"493.7"	""	"598"	"28"	"34.000"	"27.000"	"0.0506607002333751"	"21"	"0.0001991"	"0.005604"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPADGK"	"[R].aNPADGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"565.83160"	"1130.65593"	"1130.65699"	"-0.94"	"-0.00053"	"6/58"	"6"	"58"	"3907165.73077393"	"HCD"	"MS2"	"6.979479"	"269.5"	"100.000"	"26.1375"	"5728"	"5728"	"5707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"387.8"	""	"336.4"	""	"379.3"	""	"459.8"	""	"486.5"	"504.2"	""	"750"	"36"	"35.000"	"28.000"	"0.00849241615347397"	"28"	"0.00192"	"0.01602"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPADGK"	"[R].aNPADGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"Q5U2Q3"	"Ester hydrolase C11orf54 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"565.83173"	"1130.65618"	"1130.65699"	"-0.72"	"-0.00041"	"6/58"	"6"	"58"	"4986050.43249512"	"HCD"	"MS2"	"0"	"315.4"	"100.000"	"26.3486"	"5774"	"5774"	"5751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"450.9"	""	"395.8"	""	"453.6"	""	"525.3"	""	"550.3"	"617.0"	""	"750"	"35"	"35.000"	"28.000"	"0.0119132777649366"	"27"	"0.001261"	"0.01005"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVIATGDR"	"[R].gIVIATGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"565.83911"	"1130.67095"	"1130.67309"	"-1.89"	"-0.00107"	"8/68"	"8"	"68"	"1688908.30511475"	"HCD"	"MS2"	"0"	"95.9"	"100.000"	"48.2043"	"14627"	"14627"	"14605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.4"	""	"124.6"	""	"126.6"	""	"162.7"	"3.8"	"179.1"	"194.2"	""	"734"	"38"	"35.000"	"28.000"	"0.00606269979950048"	"19"	"9.9E-05"	"0.0005668"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDALVSLR"	"[K].qDALVSLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"Q5FVJ0"	"Protein RUFY3 OS=Rattus norvegicus OX=10116 GN=Rufy3 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"565.83966"	"1130.67204"	"1130.67309"	"-0.92"	"-0.00052"	"5/78"	"5"	"78"	"537264.100097656"	"HCD"	"MS2"	"29.36039"	"39.7"	"100.000"	"58.0035"	"18604"	"18604"	"18574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.8"	""	"45.2"	""	"60.6"	""	"70.8"	"0.4"	"74.3"	"68.6"	""	"731"	"14"	"35.000"	"28.000"	"1.38639627007881"	"19"	"0.004275"	"0.05037"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVIATGDR"	"[R].gIVIATGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"565.84009"	"1130.67290"	"1130.67309"	"-0.17"	"-0.00009"	"8/68"	"8"	"68"	"1588571.2744751"	"HCD"	"MS2"	"23.02431"	"87.0"	"100.000"	"48.5016"	"14710"	"14710"	"14694"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.0"	""	"94.8"	""	"122.5"	""	"144.6"	"2.2"	"162.8"	"193.4"	""	"730"	"29"	"35.000"	"28.000"	"0.0463759548401117"	"21"	"9.9E-05"	"0.0009318"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLNPGK"	"[R].gSLNPGk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"565.85077"	"1130.69426"	"1130.69338"	"0.78"	"0.00044"	"5/54"	"5"	"54"	"1106465.99224854"	"HCD"	"MS2"	"26.40146"	"90.7"	"100.000"	"35.0183"	"9243"	"9243"	"9225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.5"	""	"119.0"	""	"128.2"	""	"144.7"	""	"167.8"	"183.6"	""	"719"	"24"	"35.000"	"28.000"	"0.134802794307251"	"25"	"0.006033"	"0.07328"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTAQVLIR"	"[K].tTAQVLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"565.85742"	"1130.70757"	"1130.70947"	"-1.69"	"-0.00095"	"6/66"	"6"	"66"	"1623405.02209473"	"HCD"	"MS2"	"22.27168"	"96.7"	"100.000"	"46.6849"	"14008"	"14008"	"13993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.6"	""	"132.6"	""	"135.8"	""	"145.4"	"4.9"	"178.5"	"177.9"	""	"459"	"35"	"33.000"	"26.000"	"0.00784842820568963"	"24"	"0.0001991"	"0.002725"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTAQVLIR"	"[K].tTAQVLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"565.85742"	"1130.70757"	"1130.70947"	"-1.69"	"-0.00095"	"6/66"	"6"	"66"	"4020937.19439697"	"HCD"	"MS2"	"0"	"200.5"	"100.000"	"46.0524"	"13756"	"13756"	"13733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.4"	""	"302.3"	""	"314.4"	""	"285.4"	"0.1"	"318.9"	"380.4"	""	"459"	"39"	"33.000"	"26.000"	"0.00312451554625936"	"22"	"0.0001991"	"0.002675"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTAQVLIR"	"[K].tTAQVLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"565.85773"	"1130.70818"	"1130.70947"	"-1.15"	"-0.00065"	"6/66"	"6"	"66"	"3423239.4128418"	"HCD"	"MS2"	"23.74837"	"171.0"	"100.000"	"46.3480"	"13841"	"13841"	"13825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.8"	""	"274.0"	""	"233.5"	""	"256.1"	"0.1"	"291.0"	"296.8"	""	"459"	"39"	"33.000"	"26.000"	"0.00316798188726362"	"24"	"0.0001991"	"0.002053"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTAQVLIR"	"[K].tTAQVLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"565.85803"	"1130.70879"	"1130.70947"	"-0.61"	"-0.00034"	"6/66"	"6"	"66"	"3469409.16717529"	"HCD"	"MS2"	"6.429192"	"164.7"	"100.000"	"46.8834"	"14052"	"14052"	"14044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.4"	""	"248.4"	""	"228.6"	""	"234.7"	""	"288.9"	"337.6"	""	"459"	"41"	"33.000"	"26.000"	"0.00175704421286134"	"22"	"0.0001686"	"0.001868"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTAQVLIR"	"[K].tTAQVLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"565.85803"	"1130.70879"	"1130.70947"	"-0.61"	"-0.00034"	"6/66"	"6"	"66"	"9187381.53564453"	"HCD"	"MS2"	"0"	"381.3"	"100.000"	"46.3320"	"13867"	"13867"	"13855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"547.6"	""	"583.3"	""	"581.0"	""	"505.5"	""	"647.7"	"747.0"	""	"459"	"44"	"33.000"	"26.000"	"0.000919989116954661"	"26"	"0.0001991"	"0.002196"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTAQVLIR"	"[K].tTAQVLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"565.85803"	"1130.70879"	"1130.70947"	"-0.61"	"-0.00034"	"6/66"	"6"	"66"	"9367958.91046143"	"HCD"	"MS2"	"0"	"366.6"	"100.000"	"46.6223"	"13948"	"13948"	"13937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"555.0"	""	"546.1"	""	"567.7"	""	"507.4"	""	"594.7"	"700.0"	""	"459"	"38"	"33.000"	"26.000"	"0.00375649391667682"	"25"	"0.0001991"	"0.00293"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFPDVAPR"	"[K].tFPDVAPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"566.32086"	"1131.63445"	"1131.63597"	"-1.35"	"-0.00076"	"5/62"	"5"	"62"	"1272059.31103516"	"HCD"	"MS2"	"36.52349"	"72.6"	"100.000"	"58.7588"	"18876"	"18876"	"18855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.9"	""	"104.0"	""	"89.5"	""	"127.1"	"2.8"	"130.1"	"130.8"	""	"762"	"18"	"35.000"	"28.000"	"0.588741941464136"	"15"	"0.00212"	"0.01885"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGFGVQAGL"	"[K].gPGFGVQAGL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"566.32135"	"1131.63542"	"1131.63597"	"-0.49"	"-0.00028"	"4/74"	"4"	"74"	"278292.782897949"	"HCD"	"MS2"	"22.13416"	"12.7"	"100.000"	"100.8307"	"35930"	"35930"	"35905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"17.7"	""	"28.2"	""	"18.5"	""	"21.1"	"23.4"	""	"944"	"18"	"36.000"	"29.000"	"0.801571003961943"	"24"	"0.002084"	"0.01874"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGFGVQAGL"	"[K].gPGFGVQAGL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"566.32196"	"1131.63664"	"1131.63597"	"0.59"	"0.00033"	"6/74"	"6"	"74"	"348909.285339355"	"HCD"	"MS2"	"13.89716"	"14.2"	"100.000"	"100.6794"	"35841"	"35841"	"35819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"15.0"	""	"35.1"	""	"25.6"	""	"23.8"	"23.0"	""	"948"	"28"	"36.000"	"29.000"	"0.0827519700484319"	"21"	"0.001488"	"0.01269"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLTSDPR"	"[K].iTLTSDPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"566.32501"	"1131.64275"	"1131.65710"	"-12.69"	"-0.00718"	"5/64"	"5"	"64"	"4076002.88580322"	"HCD"	"MS2"	"14.41069"	"246.2"	"100.000"	"49.3858"	"15069"	"15069"	"15052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"339.9"	""	"313.3"	""	"327.5"	""	"412.4"	"2.5"	"464.2"	"474.2"	""	"917"	"34"	"36.000"	"29.000"	"0.0163432844675933"	"27"	"0.009514"	"0.1266"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"566.33130"	"1131.65532"	"1131.65710"	"-1.58"	"-0.00089"	"6/62"	"6"	"62"	"23579194.9755859"	"HCD"	"MS2"	"0.3528358"	"403.7"	"41.359"	"54.1278"	"17032"	"17032"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"598.1"	""	"562.8"	""	"622.2"	""	"608.6"	""	"680.9"	"751.0"	""	"835"	"39"	"36.000"	"29.000"	"0.00500790959064866"	"27"	"0.0001991"	"0.004819"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"566.33148"	"1131.65569"	"1131.65710"	"-1.25"	"-0.00071"	"6/62"	"6"	"62"	"20687115.8514404"	"HCD"	"MS2"	"0.2904854"	"487.8"	"58.737"	"54.4453"	"17128"	"17128"	"17112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"706.9"	""	"692.7"	""	"706.4"	""	"764.6"	""	"839.7"	"911.0"	""	"822"	"38"	"36.000"	"29.000"	"0.00727514781868459"	"29"	"0.0001991"	"0.004798"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"566.33154"	"1131.65581"	"1131.65710"	"-1.14"	"-0.00065"	"7/62"	"7"	"62"	"2179747.40881348"	"HCD"	"MS2"	"18.65651"	"128.5"	"100.000"	"54.7299"	"17277"	"17277"	"17260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.4"	""	"157.3"	""	"177.8"	""	"205.8"	"0.7"	"268.7"	"238.5"	""	"822"	"11"	"36.000"	"29.000"	"3.28731878807889"	"22"	"0.006613"	"0.08277"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISVDEALR"	"[R].iSVDEALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"P49186"	"Mitogen-activated protein kinase 9 OS=Rattus norvegicus OX=10116 GN=Mapk9 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"566.33173"	"1131.65618"	"1131.65710"	"-0.82"	"-0.00046"	"9/62"	"9"	"62"	"1097630.4107666"	"HCD"	"MS2"	"22.29557"	"60.1"	"100.000"	"67.1640"	"22287"	"22287"	"22269"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.7"	""	"67.3"	""	"84.7"	""	"108.2"	""	"102.4"	"123.0"	""	"824"	"26"	"36.000"	"29.000"	"0.105900306250077"	"22"	"0.0001991"	"0.002158"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVEDTLR"	"[K].gLVEDTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"566.33173"	"1131.65618"	"1131.65710"	"-0.82"	"-0.00046"	"7/60"	"7"	"60"	"4463459.95172119"	"HCD"	"MS2"	"15.75699"	"220.9"	"100.000"	"56.0027"	"17760"	"17760"	"17750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.7"	""	"299.2"	""	"311.1"	""	"314.7"	"4.9"	"402.9"	"449.1"	""	"824"	"24"	"36.000"	"29.000"	"0.163642918381409"	"26"	"0.0005161"	"0.006656"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"566.33179"	"1131.65630"	"1131.65710"	"-0.71"	"-0.00040"	"7/62"	"7"	"62"	"2251215.43713379"	"HCD"	"MS2"	"12.26719"	"135.8"	"100.000"	"55.0198"	"17361"	"17361"	"17351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.2"	""	"163.9"	""	"187.8"	""	"221.5"	"1.0"	"255.7"	"263.8"	""	"824"	"16"	"36.000"	"29.000"	"1.07869139938622"	"25"	"0.00212"	"0.01966"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVEDTLR"	"[K].gLVEDTLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"566.33185"	"1131.65642"	"1131.65710"	"-0.60"	"-0.00034"	"7/60"	"7"	"60"	"4034704.21813965"	"HCD"	"MS2"	"0"	"209.0"	"100.000"	"55.6462"	"17650"	"17650"	"17637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"268.8"	""	"264.4"	""	"302.2"	""	"312.6"	"5.9"	"375.6"	"452.5"	""	"824"	"19"	"36.000"	"29.000"	"0.476318243783145"	"24"	"0.0009352"	"0.008133"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELGR"	"[K].lSLDELGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"566.33197"	"1131.65666"	"1131.65710"	"-0.39"	"-0.00022"	"6/62"	"6"	"62"	"936870.973022461"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"87.2768"	"30460"	"30460"	"30444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"45.0"	""	"69.2"	""	"85.4"	""	"82.0"	"143.2"	""	"824"	"39"	"36.000"	"29.000"	"0.00566105293705157"	""	"9.9E-05"	"0.0004218"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELGR"	"[K].lSLDELGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"566.33197"	"1131.65666"	"1131.65710"	"-0.39"	"-0.00022"	"6/62"	"6"	"62"	"944658.075561523"	"HCD"	"MS2"	"9.006989"	"48.2"	"100.000"	"87.2452"	"30413"	"30413"	"30398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"48.8"	""	"51.2"	""	"97.6"	""	"88.9"	"126.1"	""	"824"	"41"	"36.000"	"29.000"	"0.00319078260694638"	""	"9.9E-05"	"0.00069"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"566.33197"	"1131.65666"	"1131.65710"	"-0.39"	"-0.00022"	"6/62"	"6"	"62"	"7980339.21429443"	"HCD"	"MS2"	"0"	"344.0"	"100.000"	"54.7259"	"17242"	"17242"	"17231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"461.8"	""	"481.9"	""	"545.1"	""	"507.0"	""	"598.4"	"665.2"	""	"824"	"39"	"36.000"	"29.000"	"0.00498766431022799"	"29"	"0.0001991"	"0.002374"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVDEAVR"	"[R].lTVDEAVR.[AK]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"566.33203"	"1131.65679"	"1131.65710"	"-0.28"	"-0.00016"	"6/62"	"6"	"62"	"5136276.63458252"	"HCD"	"MS2"	"23.49471"	"295.4"	"100.000"	"51.3521"	"15901"	"15901"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.3"	""	"449.9"	""	"479.3"	""	"389.9"	"7.5"	"501.8"	"554.2"	""	"823"	"23"	"36.000"	"29.000"	"0.185938721110281"	"25"	"0.0001991"	"0.005657"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELGR"	"[K].lSLDELGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"566.33228"	"1131.65727"	"1131.65710"	"0.15"	"0.00009"	"10/62"	"10"	"62"	"421863.791015625"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"86.9744"	"30339"	"30339"	"30315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"24.0"	""	"31.5"	""	"40.2"	""	"43.0"	"67.5"	""	"862"	"35"	"36.000"	"29.000"	"0.0136923272445005"	"29"	"0"	"0.0003743"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEEVVGR"	"[K].tIEEVVGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"566.33228"	"1131.65727"	"1131.65710"	"0.15"	"0.00009"	"6/62"	"6"	"62"	"5538163.93060303"	"HCD"	"MS2"	"0.5323838"	"252.5"	"100.000"	"54.4361"	"17158"	"17158"	"17141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.0"	""	"341.7"	""	"368.9"	""	"379.2"	"0.1"	"435.7"	"510.3"	""	"862"	"39"	"36.000"	"29.000"	"0.00553958550435698"	"28"	"0.0001991"	"0.005049"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELGR"	"[K].lSLDELGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"566.33264"	"1131.65801"	"1131.65710"	"0.80"	"0.00045"	"5/62"	"5"	"62"	"309121.354858398"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"87.5660"	"30542"	"30542"	"30521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.9"	""	"19.2"	""	"26.9"	""	"34.5"	""	"37.1"	"44.5"	""	"864"	"11"	"36.000"	"29.000"	"3.29977058505562"	"20"	"0.004819"	"0.05723"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLTSDPR"	"[K].iTLTSDPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"566.33295"	"1131.65862"	"1131.65710"	"1.34"	"0.00076"	"5/64"	"5"	"64"	"3599196.3237915"	"HCD"	"MS2"	"37.47463"	"224.7"	"100.000"	"49.1569"	"15010"	"15010"	"14999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.4"	""	"267.7"	""	"267.2"	""	"407.6"	"1.8"	"440.5"	"445.1"	""	"836"	"32"	"36.000"	"29.000"	"0.0289851986914926"	"25"	"0.004959"	"0.06128"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELGR"	"[K].lSLDELGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06686"	"Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"566.33301"	"1131.65874"	"1131.65710"	"1.44"	"0.00082"	"7/62"	"7"	"62"	"267763.592285156"	"HCD"	"MS2"	"12.65313"	"18.2"	"100.000"	"86.9592"	"30298"	"30298"	"30282"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"17.6"	""	"29.4"	""	"30.5"	""	"36.5"	"43.2"	""	"836"	"14"	"36.000"	"29.000"	"1.50029368681612"	"22"	"0.0042"	"0.04525"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNVAAK"	"[K].nGNVAAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"566.34760"	"1131.68791"	"1131.68863"	"-0.63"	"-0.00036"	"6/62"	"6"	"62"	"1786717.82519531"	"HCD"	"MS2"	"43.73981"	"129.1"	"100.000"	"24.9016"	"5195"	"5195"	"5177"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.6"	""	"181.9"	""	"174.3"	""	"204.8"	""	"205.6"	"232.5"	""	"568"	"23"	"34.000"	"27.000"	"0.153928252874061"	"21"	"0.002035"	"0.01838"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNVAAK"	"[K].nGNVAAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"566.34778"	"1131.68828"	"1131.68863"	"-0.31"	"-0.00017"	"6/62"	"6"	"62"	"1781224.84277344"	"HCD"	"MS2"	"32.19198"	"131.2"	"100.000"	"24.7520"	"5172"	"5172"	"5149"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.0"	""	"194.6"	""	"163.9"	""	"198.6"	""	"215.4"	"247.9"	""	"568"	"22"	"34.000"	"27.000"	"0.188503031994142"	"20"	"0.001951"	"0.01726"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIATLTR"	"[K].vEIATLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"566.34985"	"1131.69243"	"1131.69349"	"-0.94"	"-0.00053"	"6/66"	"6"	"66"	"6748087.83306885"	"HCD"	"MS2"	"12.3451"	"281.3"	"100.000"	"68.4922"	"22859"	"22859"	"22842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"402.2"	""	"371.3"	""	"413.8"	""	"439.9"	""	"489.3"	"550.2"	""	"495"	"39"	"33.000"	"26.000"	"0.00286797395648394"	"21"	"0.0001991"	"0.003417"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIATLTR"	"[K].vEIATLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"566.35004"	"1131.69280"	"1131.69349"	"-0.61"	"-0.00035"	"6/66"	"6"	"66"	"6548562.51123047"	"HCD"	"MS2"	"12.28223"	"258.3"	"100.000"	"68.4632"	"22814"	"22814"	"22796"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.8"	""	"342.9"	""	"381.9"	""	"406.2"	""	"460.9"	"490.0"	""	"495"	"41"	"33.000"	"26.000"	"0.00210172167571488"	"23"	"0.0001686"	"0.001871"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIATLTR"	"[K].vEIATLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"566.35016"	"1131.69304"	"1131.69349"	"-0.40"	"-0.00022"	"6/66"	"6"	"66"	"2245478.44299316"	"HCD"	"MS2"	"23.4544"	"100.7"	"100.000"	"68.1569"	"22689"	"22689"	"22668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.5"	""	"133.4"	""	"136.8"	""	"165.7"	""	"174.2"	"192.3"	""	"495"	"37"	"33.000"	"26.000"	"0.00470516874281017"	"23"	"0.0001991"	"0.001981"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIATLTR"	"[K].vEIATLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"566.35059"	"1131.69390"	"1131.69349"	"0.36"	"0.00020"	"6/66"	"6"	"66"	"2221761.5401001"	"HCD"	"MS2"	"37.52246"	"99.8"	"100.000"	"68.1948"	"22737"	"22737"	"22714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.5"	""	"134.2"	""	"152.9"	""	"149.3"	"0.2"	"182.2"	"168.4"	""	"508"	"37"	"34.000"	"27.000"	"0.0052339999797058"	"23"	"9.9E-05"	"0.0008332"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIALDGK"	"[R].gIALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"P15887"	"S-arrestin OS=Rattus norvegicus OX=10116 GN=Sag PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.35962"	"1131.71196"	"1131.71378"	"-1.61"	"-0.00091"	"6/48"	"6"	"48"	"644570.506896973"	"HCD"	"MS2"	"20.25065"	"56.3"	"100.000"	"58.1003"	"18643"	"18643"	"18622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"77.0"	""	"83.3"	""	"87.9"	""	"114.1"	"98.4"	""	"340"	"38"	"32.000"	"25.000"	"0.00289366946427142"	"23"	"0.0001686"	"0.001304"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLALDGK"	"[R].gLALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"566.35962"	"1131.71196"	"1131.71378"	"-1.61"	"-0.00091"	"6/48"	"6"	"48"	"644570.506896973"	"HCD"	"MS2"	"20.25065"	"56.3"	"100.000"	"58.1003"	"18643"	"18643"	"18622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"77.0"	""	"83.3"	""	"87.9"	""	"114.1"	"98.4"	""	"340"	"38"	"32.000"	"25.000"	"0.00289366946427142"	"23"	"0.0001686"	"0.001304"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAEVVK"	"[K].aGAEVVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"566.36011"	"1131.71294"	"1131.71378"	"-0.74"	"-0.00042"	"10/48"	"10"	"48"	"2200779.70129395"	"HCD"	"MS2"	"11.27283"	"159.3"	"100.000"	"37.3039"	"10168"	"10168"	"10147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.4"	""	"238.6"	""	"206.2"	""	"251.8"	""	"294.3"	"302.6"	""	"340"	"20"	"32.000"	"25.000"	"0.15683714261631"	""	"0.002673"	"0.02805"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"566.36011"	"1131.71294"	"1131.71378"	"-0.74"	"-0.00042"	"5/48"	"5"	"48"	"2283059.85308838"	"HCD"	"MS2"	"27.37341"	"179.5"	"100.000"	"52.9308"	"16509"	"16509"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.2"	""	"256.7"	""	"280.7"	""	"243.3"	""	"351.0"	"371.6"	""	"340"	"24"	"32.000"	"25.000"	"0.0620081709773534"	"15"	"0.001951"	"0.01626"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"566.36017"	"1131.71306"	"1131.71378"	"-0.64"	"-0.00036"	"6/48"	"6"	"48"	"10661106.5750122"	"HCD"	"MS2"	"0.9580053"	"683.2"	"100.000"	"52.6274"	"16386"	"16386"	"16371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"744.2"	""	"1004.6"	""	"948.4"	""	"1089.2"	""	"1291.8"	"1419.4"	""	"340"	"30"	"32.000"	"25.000"	"0.0161975347884021"	"20"	"0.002419"	"0.02266"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"566.36017"	"1131.71306"	"1131.71378"	"-0.64"	"-0.00036"	"6/48"	"6"	"48"	"10957849.9885864"	"HCD"	"MS2"	"0.9314256"	"657.3"	"92.492"	"52.2822"	"16279"	"16279"	"16262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"746.2"	""	"967.2"	""	"924.0"	""	"1032.5"	""	"1252.9"	"1315.0"	""	"340"	"31"	"32.000"	"25.000"	"0.0132571118788954"	"23"	"0.002559"	"0.02577"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"566.36029"	"1131.71330"	"1131.71378"	"-0.42"	"-0.00024"	"6/48"	"6"	"48"	"2384884.43255615"	"HCD"	"MS2"	"14.98434"	"184.0"	"100.000"	"52.5999"	"16408"	"16408"	"16388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.5"	""	"262.5"	""	"283.5"	""	"256.6"	""	"349.3"	"371.7"	""	"340"	"30"	"32.000"	"25.000"	"0.017678642819094"	"19"	"0.001718"	"0.01505"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"566.36035"	"1131.71343"	"1131.71378"	"-0.31"	"-0.00018"	"6/48"	"6"	"48"	"3122007.77770996"	"HCD"	"MS2"	"32.6514"	"225.3"	"100.000"	"51.9846"	"16157"	"16157"	"16139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.2"	""	"295.4"	""	"291.8"	""	"383.4"	"1.6"	"453.8"	"451.6"	""	"332"	"35"	"32.000"	"25.000"	"0.0057823994295978"	"24"	"0.0001991"	"0.005276"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADVGK"	"[R].lAADVGk.[AG]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3;ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q09073; Q05962"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3; ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"566.36035"	"1131.71343"	"1131.71378"	"-0.31"	"-0.00018"	"6/48"	"6"	"48"	"3428788.03143311"	"HCD"	"MS2"	"27.13581"	"259.5"	"100.000"	"52.3185"	"16260"	"16260"	"16243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"305.9"	""	"348.1"	""	"321.2"	""	"441.6"	""	"522.8"	"525.9"	""	"332"	"37"	"32.000"	"25.000"	"0.00368220605686837"	"24"	"0.001261"	"0.009962"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIALDGK"	"[R].gIALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	""	""	"P15887"	"S-arrestin OS=Rattus norvegicus OX=10116 GN=Sag PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"566.36047"	"1131.71367"	"1131.71378"	"-0.10"	"-0.00005"	"10/48"	"10"	"48"	"529034.890258789"	"HCD"	"MS2"	"35.43388"	"45.9"	"100.000"	"58.4732"	"18760"	"18760"	"18734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.1"	""	"60.9"	""	"61.8"	""	"87.8"	""	"77.4"	"82.0"	""	"336"	"31"	"32.000"	"25.000"	"0.0123967910661689"	""	"0.001261"	"0.009532"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLALDGK"	"[R].gLALDGk.[LI]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"566.36047"	"1131.71367"	"1131.71378"	"-0.10"	"-0.00005"	"10/48"	"10"	"48"	"529034.890258789"	"HCD"	"MS2"	"35.43388"	"45.9"	"100.000"	"58.4732"	"18760"	"18760"	"18734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.1"	""	"60.9"	""	"61.8"	""	"87.8"	""	"77.4"	"82.0"	""	"336"	"31"	"32.000"	"25.000"	"0.0123967910661689"	""	"0.001261"	"0.009532"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAEVVK"	"[K].aGAEVVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"566.36090"	"1131.71453"	"1131.71378"	"0.66"	"0.00037"	"6/48"	"6"	"48"	"1941436.98028564"	"HCD"	"MS2"	"21.26931"	"139.5"	"100.000"	"37.1780"	"10154"	"10154"	"10131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.0"	""	"187.9"	""	"176.9"	""	"241.7"	""	"253.6"	"275.0"	""	"331"	"26"	"32.000"	"25.000"	"0.0419563788347404"	"21"	"0.002373"	"0.02258"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLSGPYR"	"[R].gGPLSGPYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"566.81866"	"1132.63005"	"1132.63122"	"-1.03"	"-0.00059"	"7/64"	"7"	"64"	"18689624.684021"	"HCD"	"MS2"	"0"	"601.8"	"74.562"	"41.0166"	"11709"	"11709"	"11698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1410.1"	""	"219.7"	""	"277.7"	""	"257.8"	""	"293.3"	"3285.7"	""	"814"	"42"	"36.000"	"29.000"	"0.00244677711155694"	"21"	"9.9E-05"	"0.0007853"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEQWR"	"[R].lTAEQWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"566.81873"	"1132.63017"	"1132.63122"	"-0.93"	"-0.00052"	"5/56"	"5"	"56"	"5247223.60925293"	"HCD"	"MS2"	"41.65039"	"281.1"	"100.000"	"54.9183"	"17354"	"17354"	"17332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.9"	""	"404.5"	""	"343.3"	""	"449.6"	""	"510.2"	"515.9"	""	"814"	"27"	"36.000"	"29.000"	"0.0745751969905082"	"26"	"0.005832"	"0.07152"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLSGPYR"	"[R].gGPLSGPYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"566.81897"	"1132.63066"	"1132.63122"	"-0.50"	"-0.00028"	"8/64"	"8"	"64"	"6724411.54302979"	"HCD"	"MS2"	"30.15864"	"342.7"	"100.000"	"40.8777"	"11618"	"11618"	"11596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"713.6"	""	"215.6"	""	"252.8"	""	"289.5"	""	"305.4"	"1488.3"	""	"818"	"32"	"36.000"	"29.000"	"0.0264681329841171"	"17"	"0.0001991"	"0.002229"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLSGPYR"	"[R].gGPLSGPYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"566.81897"	"1132.63066"	"1132.63122"	"-0.50"	"-0.00028"	"7/64"	"7"	"64"	"17938951.8582764"	"HCD"	"MS2"	"0"	"507.5"	"60.761"	"41.1600"	"11733"	"11733"	"11719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1189.6"	""	"179.1"	""	"239.9"	""	"212.4"	""	"224.2"	"2800.3"	""	"818"	"39"	"36.000"	"29.000"	"0.00464219423609977"	"21"	"9.9E-05"	"0.0008228"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEQWR"	"[R].lTAEQWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"566.81903"	"1132.63078"	"1132.63122"	"-0.39"	"-0.00022"	"5/56"	"5"	"56"	"5839118.73260498"	"HCD"	"MS2"	"26.34598"	"288.5"	"100.000"	"55.2819"	"17468"	"17468"	"17450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"453.2"	""	"422.9"	""	"340.4"	""	"478.6"	""	"507.3"	"534.5"	""	"818"	"23"	"36.000"	"29.000"	"0.192186690419533"	"22"	"0.008522"	"0.1089"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLSGPYR"	"[R].gGPLSGPYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"566.81909"	"1132.63091"	"1132.63122"	"-0.28"	"-0.00016"	"11/64"	"11"	"64"	"6251286.77886963"	"HCD"	"MS2"	"31.24513"	"344.2"	"100.000"	"40.7458"	"11599"	"11599"	"11579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"705.4"	""	"231.3"	""	"261.8"	""	"306.1"	""	"346.3"	"1432.3"	""	"817"	"25"	"36.000"	"29.000"	"0.135891427520601"	"15"	"0.0001686"	"0.001562"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GETALSVAR"	"[R].gETALSVAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"B2RYW9"	"Fumarylacetoacetate hydrolase domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Fahd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"566.82947"	"1132.65166"	"1132.65235"	"-0.61"	"-0.00035"	"8/72"	"8"	"72"	"2039894.60217285"	"HCD"	"MS2"	"43.00718"	"147.2"	"100.000"	"37.7234"	"10373"	"10373"	"10350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.0"	""	"171.5"	""	"179.5"	""	"219.5"	""	"291.6"	"366.4"	""	"794"	"25"	"35.000"	"28.000"	"0.137654529629655"	"21"	"9.9E-05"	"0.0008694"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLR"	"[R].eFEPLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"566.83130"	"1132.65532"	"1132.65638"	"-0.93"	"-0.00053"	"5/52"	"5"	"52"	"328487.029907227"	"HCD"	"MS2"	"30.56092"	"20.6"	"100.000"	"85.0638"	"29540"	"29540"	"29511"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.3"	""	"23.4"	""	"30.7"	""	"34.5"	""	"35.8"	"46.7"	""	"903"	"22"	"36.000"	"29.000"	"0.288840278220415"	"22"	"0.004234"	"0.04947"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFEPLLR"	"[R].eFEPLLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"Q9WVR3"	"Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 OS=Rattus norvegicus OX=10116 GN=Inppl1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"566.83167"	"1132.65605"	"1132.65638"	"-0.28"	"-0.00016"	"5/52"	"5"	"52"	"342113.66003418"	"HCD"	"MS2"	"36.41746"	"20.9"	"100.000"	"84.9870"	"29538"	"29538"	"29515"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"23.0"	""	"29.1"	""	"30.0"	"1.9"	"43.8"	"43.8"	""	"905"	"21"	"36.000"	"29.000"	"0.324054893121338"	"23"	"0.00511"	"0.06474"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGAVAGK"	"[K].tAGAVAGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"566.85736"	"1132.70745"	"1132.70903"	"-1.40"	"-0.00079"	"7/56"	"7"	"56"	"2790002.4239502"	"HCD"	"MS2"	"0"	"215.4"	"100.000"	"31.0263"	"7631"	"7631"	"7610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.1"	""	"278.3"	""	"306.6"	""	"362.3"	""	"402.3"	"393.9"	""	"248"	"44"	"30.000"	"23.000"	"0.000540034723370105"	""	"9.9E-05"	"0.0008136"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAGAVAGK"	"[K].tAGAVAGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"566.85736"	"1132.70745"	"1132.70903"	"-1.40"	"-0.00079"	"7/56"	"7"	"56"	"2865066.03570557"	"HCD"	"MS2"	"7.604891"	"203.6"	"100.000"	"30.8993"	"7618"	"7618"	"7595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"300.6"	""	"257.6"	""	"301.3"	""	"322.1"	""	"378.6"	"371.2"	""	"248"	"42"	"30.000"	"23.000"	"0.00078599844195859"	""	"9.9E-05"	"0.0007366"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQHLHLR"	"[R].tQHLHLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"378.56250"	"1133.67295"	"1133.67409"	"-1.01"	"-0.00038"	"6/58"	"6"	"58"	"6667301.91174316"	"HCD"	"MS2"	"59.30236"	"289.7"	"100.000"	"20.7000"	"3592"	"3592"	"3563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"474.5"	""	"365.3"	""	"452.6"	""	"408.6"	"20.2"	"514.7"	"505.7"	""	"543"	"25"	"34.000"	"27.000"	"0.0818031135566532"	"20"	"0.001348"	"0.01095"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGANAK"	"[K].iTGAnAk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"567.34955"	"1133.69182"	"1133.69305"	"-1.08"	"-0.00061"	"6/52"	"6"	"52"	"2949874.21685791"	"HCD"	"MS2"	"8.019361"	"217.0"	"100.000"	"38.4132"	"10619"	"10619"	"10594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"274.0"	""	"232.2"	""	"263.1"	""	"444.4"	"2.6"	"428.3"	"414.5"	""	"355"	"28"	"32.000"	"25.000"	"0.029322321918565"	""	"0.001951"	"0.01654"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGEALK"	"[R].sAGEALk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q02974"	"Ketohexokinase OS=Rattus norvegicus OX=10116 GN=Khk PE=1 SV=1"	"Q02974"	"Ketohexokinase OS=Rattus norvegicus OX=10116 GN=Khk PE=1 SV=1"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"3"	"567.34985"	"1133.69243"	"1133.69304"	"-0.54"	"-0.00031"	"10/54"	"10"	"54"	"1547223.63842773"	"HCD"	"MS2"	"35.07831"	"128.9"	"100.000"	"34.9632"	"9259"	"9259"	"9236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.3"	""	"166.4"	""	"161.6"	""	"210.8"	""	"237.1"	"252.0"	""	"355"	"15"	"32.000"	"25.000"	"0.539757092057539"	""	"0.002525"	"0.02398"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGANAK"	"[K].iTGAnAk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"567.34998"	"1133.69267"	"1133.69305"	"-0.33"	"-0.00019"	"6/52"	"6"	"52"	"3003781.73675537"	"HCD"	"MS2"	"8.786244"	"213.0"	"100.000"	"38.2522"	"10589"	"10589"	"10565"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"247.4"	""	"220.6"	""	"246.8"	""	"437.2"	"3.5"	"449.3"	"418.7"	""	"359"	"28"	"32.000"	"25.000"	"0.028448832804677"	""	"0.001951"	"0.01715"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGEALK"	"[R].sAGEALk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q02974"	"Ketohexokinase OS=Rattus norvegicus OX=10116 GN=Khk PE=1 SV=1"	"Q02974"	"Ketohexokinase OS=Rattus norvegicus OX=10116 GN=Khk PE=1 SV=1"	"0"	"2"	"2"	"0.0800"	"0.0000"	"1"	"1"	"3"	"567.35034"	"1133.69341"	"1133.69304"	"0.32"	"0.00018"	"12/54"	"12"	"54"	"1475480.80438232"	"HCD"	"MS2"	"21.246"	"128.7"	"100.000"	"35.1079"	"9279"	"9279"	"9263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.7"	""	"157.0"	"3.4"	"153.1"	""	"214.8"	"0.2"	"243.8"	"257.9"	""	"356"	"25"	"32.000"	"25.000"	"0.0545029491196941"	""	"0.001615"	"0.01409"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"567.79205"	"1134.57683"	"1134.57813"	"-1.14"	"-0.00065"	"6/48"	"6"	"48"	"2343418.14733887"	"HCD"	"MS2"	"6.473709"	"132.8"	"100.000"	"61.5404"	"20006"	"20006"	"19989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.1"	""	"186.5"	""	"199.2"	""	"197.9"	"0.1"	"252.4"	"269.3"	""	"521"	"26"	"34.000"	"27.000"	"0.0712537503202899"	"20"	"0.002525"	"0.02378"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"567.79205"	"1134.57683"	"1134.57813"	"-1.14"	"-0.00065"	"5/48"	"5"	"48"	"6493259.80267334"	"HCD"	"MS2"	"3.592263"	"323.7"	"100.000"	"61.1137"	"19867"	"19867"	"19848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"385.6"	""	"468.8"	""	"485.0"	""	"486.5"	""	"572.9"	"678.3"	""	"521"	"28"	"34.000"	"27.000"	"0.045899476009023"	"21"	"0.00307"	"0.03323"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"567.79224"	"1134.57720"	"1134.57813"	"-0.82"	"-0.00046"	"6/48"	"6"	"48"	"3185231.9899292"	"HCD"	"MS2"	"5.114738"	"168.1"	"100.000"	"61.4222"	"19992"	"19992"	"19974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.6"	""	"252.4"	""	"244.5"	""	"242.7"	""	"306.4"	"355.7"	""	"521"	"28"	"34.000"	"27.000"	"0.0442392471466285"	"21"	"0.00307"	"0.03292"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"567.79224"	"1134.57720"	"1134.57813"	"-0.82"	"-0.00046"	"6/48"	"6"	"48"	"6882309.35223389"	"HCD"	"MS2"	"0.4906451"	"351.6"	"100.000"	"61.2288"	"19882"	"19882"	"19865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"432.1"	""	"496.5"	""	"525.3"	""	"536.1"	"1.1"	"629.0"	"712.7"	""	"521"	"32"	"34.000"	"27.000"	"0.0174103590526624"	"22"	"0.002525"	"0.02368"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"567.79242"	"1134.57756"	"1134.57813"	"-0.50"	"-0.00028"	"6/48"	"6"	"48"	"2577206.53613281"	"HCD"	"MS2"	"16.75013"	"148.1"	"100.000"	"60.9323"	"19761"	"19761"	"19741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.7"	""	"214.6"	""	"228.7"	""	"224.4"	""	"262.4"	"289.9"	""	"536"	"32"	"34.000"	"27.000"	"0.0161114561645518"	"23"	"0.00212"	"0.01895"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYADFYR"	"[K].aYADFYR.[N]"	"N-Term(TMT6plex)"	"1"	"2"	"P11951"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3"	"P11951; P11950"	"Cytochrome c oxidase subunit 6C-2 OS=Rattus norvegicus OX=10116 GN=Cox6c2 PE=1 SV=3; Cytochrome c oxidase subunit 6C-1 OS=Rattus norvegicus OX=10116 GN=Cox6c1 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"567.79279"	"1134.57829"	"1134.57813"	"0.15"	"0.00008"	"6/48"	"6"	"48"	"2428488.46343994"	"HCD"	"MS2"	"27.73107"	"134.2"	"100.000"	"60.8237"	"19749"	"19749"	"19730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.4"	""	"200.2"	""	"196.6"	""	"199.6"	"0.1"	"242.6"	"264.0"	""	"542"	"32"	"34.000"	"27.000"	"0.0165946956157414"	"24"	"0.001615"	"0.01463"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDMEIER"	"[K].lDMEIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"3"	"567.80469"	"1134.60210"	"1134.60263"	"-0.46"	"-0.00026"	"5/56"	"5"	"56"	"678996.183349609"	"HCD"	"MS2"	"22.71133"	"39.2"	"100.000"	"67.4668"	"22442"	"22442"	"22416"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.7"	""	"62.6"	""	"49.9"	""	"48.2"	"1.4"	"66.7"	"82.4"	""	"677"	"23"	"35.000"	"28.000"	"0.185591752625709"	"21"	"0.00192"	"0.01602"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDMEIER"	"[K].lDMEIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"3"	"567.80475"	"1134.60222"	"1134.60263"	"-0.36"	"-0.00020"	"9/56"	"9"	"56"	"858296.952941895"	"HCD"	"MS2"	"16.28692"	"49.0"	"100.000"	"67.8174"	"22583"	"22583"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.3"	""	"62.5"	""	"66.9"	""	"59.3"	""	"92.4"	"111.5"	""	"677"	"30"	"35.000"	"28.000"	"0.0342419645266976"	"25"	"0.001261"	"0.009653"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDMEIER"	"[K].lDMEIER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"3"	"567.80493"	"1134.60259"	"1134.60263"	"-0.03"	"-0.00002"	"6/56"	"6"	"56"	"733210.202209473"	"HCD"	"MS2"	"19.17823"	"46.4"	"100.000"	"67.4680"	"22411"	"22411"	"22391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.2"	""	"66.5"	""	"64.3"	""	"54.2"	""	"83.4"	"91.5"	""	"695"	"24"	"35.000"	"28.000"	"0.155222548272459"	"24"	"0.001217"	"0.009306"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVWTDSR"	"[K].aAVWTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"567.80835"	"1134.60942"	"1134.61049"	"-0.94"	"-0.00053"	"5/60"	"5"	"60"	"8853106.33538818"	"HCD"	"MS2"	"13.49201"	"430.7"	"100.000"	"43.6515"	"12779"	"12779"	"12762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.7"	""	"392.3"	""	"364.6"	""	"784.3"	""	"1108.1"	"1139.7"	""	"729"	"35"	"35.000"	"28.000"	"0.0124078785146015"	"26"	"0.0001991"	"0.004881"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVWTDSR"	"[K].aAVWTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"567.80847"	"1134.60967"	"1134.61049"	"-0.72"	"-0.00041"	"5/60"	"5"	"60"	"8631511.37872314"	"HCD"	"MS2"	"9.456275"	"399.3"	"96.902"	"43.8214"	"12813"	"12813"	"12804"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"309.8"	""	"375.0"	""	"345.7"	""	"703.6"	""	"1044.8"	"1036.8"	""	"729"	"32"	"35.000"	"28.000"	"0.0238614885447522"	"25"	"0.0001991"	"0.005355"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALAMGADR"	"[R].tALAMGADR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"567.80988"	"1134.61247"	"1134.61386"	"-1.22"	"-0.00069"	"10/78"	"10"	"78"	"7056307.27203369"	"HCD"	"MS2"	"0"	"345.6"	"100.000"	"39.6978"	"11173"	"11173"	"11162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"633.7"	""	"535.5"	""	"560.7"	""	"337.3"	""	"576.8"	"629.9"	""	"719"	"43"	"35.000"	"28.000"	"0.0020216170640593"	"24"	"0"	"0.000391"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALAMGADR"	"[R].tALAMGADR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"567.80988"	"1134.61247"	"1134.61386"	"-1.22"	"-0.00069"	"7/78"	"7"	"78"	"7267507.45648193"	"HCD"	"MS2"	"3.111065"	"349.4"	"100.000"	"39.7795"	"11172"	"11172"	"11159"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"643.0"	""	"540.0"	""	"543.0"	""	"359.8"	""	"577.8"	"644.7"	""	"719"	"41"	"35.000"	"28.000"	"0.00295596232655972"	"23"	"9.9E-05"	"0.0004413"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEHVFR"	"[K].fAEHVFR.[T]"	"N-Term(TMT6plex)"	"1"	"3"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"378.87955"	"1134.62409"	"1134.62574"	"-1.46"	"-0.00055"	"5/48"	"5"	"48"	"956166.273376465"	"HCD"	"MS2"	"30.17145"	"40.6"	"100.000"	"46.0287"	"13712"	"13712"	"13685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.9"	""	"51.2"	""	"60.8"	""	"73.0"	""	"78.3"	"79.5"	""	"727"	"25"	"35.000"	"28.000"	"0.112332238971869"	"19"	"0.004314"	"0.05062"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEHVFR"	"[K].fAEHVFR.[T]"	"N-Term(TMT6plex)"	"1"	"3"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"378.87955"	"1134.62409"	"1134.62574"	"-1.46"	"-0.00055"	"9/48"	"9"	"48"	"925370.48059082"	"HCD"	"MS2"	"21.63485"	"35.2"	"100.000"	"45.7193"	"13620"	"13620"	"13592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"36.0"	""	"57.2"	""	"70.5"	"0.0"	"65.4"	"65.7"	""	"727"	"24"	"35.000"	"28.000"	"0.135989198836891"	"18"	"0.001615"	"0.0131"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESINSR"	"[K].sLESINSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"567.81873"	"1134.63017"	"1134.63162"	"-1.27"	"-0.00072"	"6/72"	"6"	"72"	"1892506.87542725"	"HCD"	"MS2"	"30.62667"	"147.6"	"100.000"	"37.2740"	"10156"	"10156"	"10131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.8"	""	"162.9"	""	"175.1"	""	"296.7"	"3.6"	"294.7"	"284.9"	""	"756"	"16"	"35.000"	"28.000"	"0.958278622328209"	"19"	"0.008255"	"0.105"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESINSR"	"[K].sLESINSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"567.81927"	"1134.63127"	"1134.63162"	"-0.30"	"-0.00017"	"6/72"	"6"	"72"	"7275180.84869385"	"HCD"	"MS2"	"5.18663"	"351.4"	"100.000"	"36.9478"	"10022"	"10022"	"10004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"465.2"	""	"390.7"	""	"441.7"	""	"611.7"	""	"694.2"	"732.0"	""	"759"	"38"	"35.000"	"28.000"	"0.00578378020066072"	"27"	"0.0007633"	"0.007473"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESINSR"	"[K].sLESINSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"567.81940"	"1134.63152"	"1134.63162"	"-0.09"	"-0.00005"	"6/72"	"6"	"72"	"6222188.50872803"	"HCD"	"MS2"	"2.222395"	"304.5"	"100.000"	"36.8333"	"10013"	"10013"	"9995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"419.6"	""	"346.3"	""	"353.6"	""	"544.4"	""	"620.2"	"607.8"	""	"760"	"38"	"35.000"	"28.000"	"0.00587196687024597"	"27"	"0.0009352"	"0.008172"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPLDER"	"[R].yLPLDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"567.82043"	"1134.63359"	"1134.63564"	"-1.80"	"-0.00102"	"5/50"	"5"	"50"	"762945.545410156"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"65.1041"	"21452"	"21452"	"21426"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.5"	""	"67.6"	""	"64.3"	""	"85.2"	"4.5"	"95.8"	"86.4"	""	"751"	"38"	"35.000"	"28.000"	"0.00620311655234995"	"21"	"0.001406"	"0.01155"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPLDER"	"[R].yLPLDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"P97849"	"Long-chain fatty acid transport protein 1 OS=Rattus norvegicus OX=10116 GN=Slc27a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"567.82080"	"1134.63432"	"1134.63564"	"-1.16"	"-0.00066"	"5/50"	"5"	"50"	"855321.702392578"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"65.1697"	"21512"	"21512"	"21492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.7"	""	"70.6"	""	"78.4"	""	"88.8"	"0.2"	"112.6"	"100.5"	""	"783"	"38"	"35.000"	"28.000"	"0.00607759514398588"	"21"	"0.00192"	"0.01589"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIPYLR"	"[K].dEIPYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"567.82123"	"1134.63518"	"1134.63564"	"-0.41"	"-0.00023"	"9/50"	"9"	"50"	"1016046.5793457"	"HCD"	"MS2"	"25.19242"	"49.6"	"100.000"	"75.9604"	"25857"	"25857"	"25833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.3"	""	"59.2"	""	"60.6"	""	"81.7"	""	"109.5"	"101.3"	""	"783"	"21"	"35.000"	"28.000"	"0.283616678369359"	"27"	"0.001872"	"0.01556"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIPYLR"	"[K].dEIPYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"567.82135"	"1134.63542"	"1134.63564"	"-0.19"	"-0.00011"	"9/50"	"9"	"50"	"1348811.5536499"	"HCD"	"MS2"	"29.41483"	"56.6"	"100.000"	"75.9917"	"25901"	"25901"	"25881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.2"	""	"70.1"	""	"67.2"	""	"83.7"	""	"128.4"	"120.3"	""	"788"	"14"	"35.000"	"28.000"	"1.44709226396245"	"26"	"0.008255"	"0.1047"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDNGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"567.82635"	"1134.64543"	"1134.64687"	"-1.27"	"-0.00072"	"6/62"	"6"	"62"	"4222811.73675537"	"HCD"	"MS2"	"0"	"196.4"	"100.000"	"69.4189"	"23202"	"23202"	"23184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.2"	""	"293.3"	""	"298.9"	""	"274.3"	""	"319.7"	"356.3"	""	"658"	"39"	"35.000"	"28.000"	"0.00437719503514792"	"25"	"0.0001991"	"0.002769"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDNGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"567.82660"	"1134.64592"	"1134.64687"	"-0.84"	"-0.00048"	"6/62"	"6"	"62"	"1346108.70422363"	"HCD"	"MS2"	"32.18887"	"82.9"	"100.000"	"69.1267"	"23083"	"23083"	"23062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.6"	""	"116.8"	""	"118.0"	""	"134.2"	""	"141.6"	"159.3"	""	"658"	"35"	"35.000"	"28.000"	"0.00951033681298241"	"23"	"0.0001686"	"0.001865"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNAVAFR"	"[K].dLNAVAFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"567.82690"	"1134.64653"	"1134.64687"	"-0.30"	"-0.00017"	"7/66"	"7"	"66"	"1673423.01434326"	"HCD"	"MS2"	"0"	"88.9"	"100.000"	"69.7394"	"23332"	"23332"	"23314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.6"	""	"114.4"	""	"136.6"	""	"132.2"	""	"156.0"	"161.5"	""	"664"	"21"	"35.000"	"28.000"	"0.263110441719517"	""	"0.0001991"	"0.003426"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDNGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"567.82690"	"1134.64653"	"1134.64687"	"-0.30"	"-0.00017"	"6/62"	"6"	"62"	"4466554.78723145"	"HCD"	"MS2"	"0"	"210.9"	"100.000"	"69.4436"	"23246"	"23246"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.3"	""	"302.3"	""	"359.4"	""	"294.0"	""	"339.4"	"366.3"	""	"664"	"37"	"35.000"	"28.000"	"0.00660903548543747"	"20"	"0.0001686"	"0.001827"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDNGFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"567.82697"	"1134.64665"	"1134.64687"	"-0.19"	"-0.00011"	"6/62"	"6"	"62"	"1150750.33404541"	"HCD"	"MS2"	"27.66683"	"72.9"	"100.000"	"69.1489"	"23126"	"23126"	"23104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"105.4"	""	"106.7"	""	"113.4"	""	"134.3"	"136.9"	""	"669"	"22"	"35.000"	"28.000"	"0.214484603367737"	"23"	"0.0001686"	"0.001964"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNAVAFR"	"[K].dLNAVAFR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"567.82697"	"1134.64665"	"1134.64687"	"-0.19"	"-0.00011"	"7/66"	"7"	"66"	"2029620.57800293"	"HCD"	"MS2"	"0"	"103.5"	"100.000"	"69.7642"	"23376"	"23376"	"23356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.9"	""	"141.4"	""	"148.4"	""	"153.1"	""	"182.3"	"181.6"	""	"669"	"23"	"35.000"	"28.000"	"0.185522300984421"	""	"0.0001991"	"0.005877"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLFEIR"	"[R].vqLFEIR.[L]"	"N-Term(TMT6plex); Q2(Deamidated)"	"1"	"1"	"B0BNL6"	"Arrestin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Arrdc1 PE=1 SV=1"	"B0BNL6"	"Arrestin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Arrdc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"567.83929"	"1134.67131"	"1134.67203"	"-0.63"	"-0.00036"	"4/58"	"4"	"58"	"151676.651000977"	"HCD"	"MS2"	"42.00339"	"9.7"	"100.000"	"107.3184"	"38516"	"38516"	"38502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"16.2"	""	"11.3"	""	"12.2"	""	"20.6"	"16.8"	""	"480"	"19"	"33.000"	"26.000"	"0.284584499560118"	"23"	"0.006845"	"0.08557"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLFEIR"	"[R].vqLFEIR.[L]"	"N-Term(TMT6plex); Q2(Deamidated)"	"1"	"1"	"B0BNL6"	"Arrestin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Arrdc1 PE=1 SV=1"	"B0BNL6"	"Arrestin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Arrdc1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"567.83990"	"1134.67253"	"1134.67203"	"0.45"	"0.00025"	"7/58"	"7"	"58"	"604261.308959961"	"HCD"	"MS2"	"20.33046"	"32.0"	"100.000"	"106.7575"	"38276"	"38276"	"38253"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.9"	""	"37.2"	""	"46.6"	""	"57.4"	"1.3"	"61.7"	"53.7"	""	"512"	"30"	"34.000"	"27.000"	"0.0244478102021488"	""	"0.002373"	"0.02247"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"568.31848"	"1135.62969"	"1135.63089"	"-1.06"	"-0.00060"	"9/62"	"9"	"62"	"947781.620544434"	"HCD"	"MS2"	"6.524913"	"50.7"	"100.000"	"84.0255"	"29121"	"29121"	"29101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"60.3"	""	"62.7"	""	"93.2"	""	"91.6"	"106.5"	""	"734"	"28"	"35.000"	"28.000"	"0.0630472378086835"	"23"	"0.001718"	"0.01501"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"568.31860"	"1135.62993"	"1135.63089"	"-0.84"	"-0.00048"	"6/62"	"6"	"62"	"1038773.87219238"	"HCD"	"MS2"	"0"	"59.7"	"100.000"	"82.8667"	"28681"	"28681"	"28662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.5"	""	"76.0"	""	"84.3"	""	"102.2"	"0.9"	"96.1"	"113.5"	""	"734"	"31"	"35.000"	"28.000"	"0.027081085245738"	"23"	"0.001261"	"0.01012"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGFDEIR"	"[R].gLGFDEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"568.31860"	"1135.62993"	"1135.63089"	"-0.84"	"-0.00048"	"5/58"	"5"	"58"	"992967.530273438"	"HCD"	"MS2"	"11.21595"	"52.9"	"100.000"	"76.5185"	"26084"	"26084"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"59.4"	""	"66.1"	""	"82.2"	""	"100.8"	"101.2"	""	"734"	"23"	"35.000"	"28.000"	"0.192604337911666"	""	"0.001261"	"0.009716"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"568.31873"	"1135.63017"	"1135.63089"	"-0.63"	"-0.00036"	"5/62"	"5"	"62"	"884240.602294922"	"HCD"	"MS2"	"0"	"45.2"	"100.000"	"73.9832"	"25055"	"25055"	"25037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.2"	""	"45.7"	""	"60.0"	""	"78.1"	""	"93.4"	"92.5"	""	"751"	"24"	"35.000"	"28.000"	"0.154742618421047"	"24"	"0.001615"	"0.01423"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"568.31885"	"1135.63042"	"1135.63089"	"-0.41"	"-0.00024"	"5/62"	"5"	"62"	"648008.200439453"	"HCD"	"MS2"	"7.894152"	"37.2"	"100.000"	"74.0974"	"25131"	"25131"	"25112"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"35.4"	""	"50.7"	""	"64.7"	"0.9"	"72.3"	"80.6"	""	"751"	"34"	"35.000"	"28.000"	"0.0166191933822166"	"24"	"0.001261"	"0.009988"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAIDNGFR"	"[K].iAIDnGFR.[H]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"568.31885"	"1135.63042"	"1135.63089"	"-0.41"	"-0.00024"	"6/62"	"6"	"62"	"2525301.46685791"	"HCD"	"MS2"	"1.590083"	"94.3"	"100.000"	"77.9415"	"26656"	"26656"	"26639"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.6"	""	"118.2"	""	"128.9"	""	"149.9"	""	"167.9"	"189.6"	""	"751"	"33"	"35.000"	"28.000"	"0.0194809414617825"	""	"0.0001991"	"0.003122"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"568.31891"	"1135.63054"	"1135.63089"	"-0.31"	"-0.00017"	"6/62"	"6"	"62"	"1782895.41876221"	"HCD"	"MS2"	"6.692085"	"91.1"	"100.000"	"82.8552"	"28648"	"28648"	"28629"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.2"	""	"117.7"	""	"120.3"	""	"169.6"	""	"159.0"	"179.1"	""	"751"	"33"	"35.000"	"28.000"	"0.0208261955215695"	"21"	"0.001261"	"0.01002"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"568.31891"	"1135.63054"	"1135.63089"	"-0.31"	"-0.00017"	"5/62"	"5"	"62"	"6236297.91094971"	"HCD"	"MS2"	"0.8135618"	"247.0"	"100.000"	"73.6816"	"24933"	"24933"	"24918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"357.2"	""	"246.8"	""	"272.9"	""	"445.0"	""	"517.6"	"510.3"	""	"751"	"35"	"35.000"	"28.000"	"0.0114712287801243"	""	"0.002588"	"0.0272"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"568.31897"	"1135.63066"	"1135.63089"	"-0.20"	"-0.00011"	"6/62"	"6"	"62"	"937920.840942383"	"HCD"	"MS2"	"9.042764"	"51.0"	"100.000"	"84.0522"	"29161"	"29161"	"29140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"60.1"	""	"67.8"	""	"90.6"	"1.3"	"87.0"	"101.1"	""	"764"	"31"	"35.000"	"28.000"	"0.0319200352964337"	"22"	"0.001453"	"0.0116"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"568.31903"	"1135.63078"	"1135.63089"	"-0.09"	"-0.00005"	"5/62"	"5"	"62"	"5781327.40380859"	"HCD"	"MS2"	"0"	"236.8"	"100.000"	"73.7954"	"25008"	"25008"	"24992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"350.1"	""	"259.6"	""	"261.2"	""	"420.2"	""	"481.0"	"478.6"	""	"764"	"36"	"35.000"	"28.000"	"0.00895495407452211"	""	"0.002328"	"0.02203"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"568.31903"	"1135.63078"	"1135.63089"	"-0.09"	"-0.00005"	"10/62"	"10"	"62"	"7023140.9619751"	"HCD"	"MS2"	"0.5613405"	"312.9"	"100.000"	"83.7163"	"28997"	"28997"	"28981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"409.0"	""	"389.3"	""	"414.8"	""	"531.5"	"1.0"	"564.0"	"657.9"	""	"764"	"33"	"35.000"	"28.000"	"0.0195012909990605"	"20"	"0.002559"	"0.02575"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGFDEIR"	"[R].gLGFDEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"Q9Z2Q7"	"Syntaxin-8 OS=Rattus norvegicus OX=10116 GN=Stx8 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"568.31909"	"1135.63091"	"1135.63089"	"0.02"	"0.00001"	"11/58"	"11"	"58"	"1124581.56420898"	"HCD"	"MS2"	"14.37692"	"65.9"	"100.000"	"76.5448"	"26126"	"26126"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.2"	""	"64.9"	""	"82.9"	""	"102.8"	"0.2"	"121.3"	"139.5"	""	"764"	"22"	"35.000"	"28.000"	"0.245506708015102"	"25"	"0.001348"	"0.01063"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"568.31909"	"1135.63091"	"1135.63089"	"0.02"	"0.00001"	"5/62"	"5"	"62"	"4929833.56591797"	"HCD"	"MS2"	"5.331483"	"208.2"	"100.000"	"73.4845"	"24882"	"24882"	"24865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"322.3"	""	"227.8"	""	"234.0"	""	"408.8"	""	"399.6"	"384.2"	""	"764"	"39"	"35.000"	"28.000"	"0.00471046046293443"	""	"0.001615"	"0.0146"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVQEIFR"	"[R].dVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"568.31915"	"1135.63103"	"1135.63089"	"0.12"	"0.00007"	"5/62"	"5"	"62"	"4605755.5848999"	"HCD"	"MS2"	"7.47872"	"186.8"	"100.000"	"73.3864"	"24812"	"24812"	"24794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.8"	""	"204.5"	""	"208.9"	""	"338.1"	""	"372.0"	"353.3"	""	"764"	"39"	"35.000"	"28.000"	"0.00463514540877622"	""	"0.001615"	"0.01417"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"568.31915"	"1135.63103"	"1135.63089"	"0.12"	"0.00007"	"10/62"	"10"	"62"	"7642103.07244873"	"HCD"	"MS2"	"0"	"340.0"	"100.000"	"83.7385"	"29035"	"29035"	"29018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"442.2"	""	"392.9"	""	"456.7"	""	"584.2"	""	"614.6"	"739.0"	""	"764"	"33"	"35.000"	"28.000"	"0.0195913048684702"	"20"	"0.002588"	"0.02628"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"568.31976"	"1135.63225"	"1135.63089"	"1.20"	"0.00068"	"10/62"	"10"	"62"	"55924710.9248047"	"HCD"	"MS2"	"0.03851125"	"425.2"	"17.162"	"83.4294"	"28910"	"28910"	"28894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"562.6"	""	"492.3"	""	"603.9"	""	"755.4"	""	"755.2"	"870.3"	""	"749"	"31"	"35.000"	"28.000"	"0.0271926681059466"	"20"	"0.008135"	"0.1037"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"568.31982"	"1135.63237"	"1135.63089"	"1.31"	"0.00074"	"5/62"	"5"	"62"	"219342.000305176"	"HCD"	"MS2"	"18.35683"	"17.0"	"100.000"	"85.1646"	"29610"	"29610"	"29589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"20.3"	""	"22.5"	""	"25.9"	""	"35.0"	"35.4"	""	"749"	"14"	"35.000"	"28.000"	"1.41075572719474"	"23"	"0.003568"	"0.03977"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"568.31982"	"1135.63237"	"1135.63089"	"1.31"	"0.00074"	"10/62"	"10"	"62"	"34131558.3164063"	"HCD"	"MS2"	"0.04241005"	"521.0"	"34.766"	"83.1398"	"28764"	"28764"	"28754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"670.4"	""	"643.0"	""	"694.4"	""	"919.2"	""	"930.6"	"1087.7"	""	"749"	"31"	"35.000"	"28.000"	"0.027381158676454"	"20"	"0.006423"	"0.07999"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"568.31995"	"1135.63262"	"1135.63089"	"1.52"	"0.00086"	"10/62"	"10"	"62"	"26605995.0921021"	"HCD"	"MS2"	"0"	"807.8"	"66.025"	"83.1507"	"28797"	"28797"	"28780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1083.5"	""	"982.9"	""	"1103.9"	""	"1444.3"	""	"1423.5"	"1623.7"	""	"746"	"31"	"35.000"	"28.000"	"0.0272714878139315"	"20"	"0.005871"	"0.07261"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"568.32062"	"1135.63396"	"1135.63089"	"2.70"	"0.00153"	"10/62"	"10"	"62"	"47341014.6496582"	"HCD"	"MS2"	"0"	"476.7"	"23.500"	"83.4278"	"28881"	"28881"	"28864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"615.5"	""	"589.2"	""	"661.3"	""	"830.2"	""	"834.8"	"990.9"	""	"750"	"31"	"35.000"	"28.000"	"0.0271038676350814"	"20"	"0.008327"	"0.1062"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"568.32098"	"1135.63469"	"1135.63592"	"-1.09"	"-0.00062"	"10/52"	"10"	"52"	"2059983.60760498"	"HCD"	"MS2"	"3.113703"	"218.6"	"100.000"	"22.0959"	"4141"	"4141"	"4133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"361.1"	""	"283.4"	""	"290.0"	""	"349.1"	""	"393.5"	"398.4"	""	"754"	"31"	"35.000"	"28.000"	"0.0318670124625429"	"25"	"0.002673"	"0.02816"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"568.32117"	"1135.63506"	"1135.63592"	"-0.76"	"-0.00043"	"10/52"	"10"	"52"	"2061898.28057861"	"HCD"	"MS2"	"6.692584"	"217.1"	"100.000"	"22.2328"	"4152"	"4152"	"4143"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"347.7"	""	"278.7"	""	"289.0"	""	"363.0"	"0.7"	"384.7"	"391.8"	""	"754"	"31"	"35.000"	"28.000"	"0.0327598081840936"	"25"	"0.002628"	"0.02772"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"568.32135"	"1135.63542"	"1135.63592"	"-0.44"	"-0.00025"	"6/52"	"6"	"52"	"3436134.96325684"	"HCD"	"MS2"	"0"	"334.8"	"100.000"	"22.5200"	"4260"	"4260"	"4247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"429.2"	""	"363.7"	""	"467.7"	""	"573.3"	""	"644.5"	"705.4"	""	"754"	"37"	"35.000"	"28.000"	"0.00755685954316666"	"24"	"0.00167"	"0.01493"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEK"	"[KE].gAGTDEk.[VAT]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3;Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P14668; P48037"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3; Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"568.32147"	"1135.63567"	"1135.63592"	"-0.23"	"-0.00013"	"10/52"	"10"	"52"	"3772686.73083496"	"HCD"	"MS2"	"0"	"341.3"	"100.000"	"22.3510"	"4235"	"4235"	"4230"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"457.0"	""	"387.1"	""	"476.1"	""	"583.8"	""	"637.6"	"698.7"	""	"768"	"31"	"35.000"	"28.000"	"0.0288623191302991"	"25"	"0.003001"	"0.03254"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEDLRR"	"[K].fAEDLRR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"379.21869"	"1135.64151"	"1135.64212"	"-0.54"	"-0.00020"	"4/52"	"4"	"52"	"1895808.81427002"	"HCD"	"MS2"	"5.948054"	"96.9"	"100.000"	"37.1803"	"10155"	"10155"	"10131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.7"	""	"172.0"	""	"100.7"	""	"160.4"	"0.4"	"122.5"	"117.5"	""	"700"	"27"	"35.000"	"28.000"	"0.0703182484413055"	""	"0.00394"	"0.04343"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEDLRR"	"[K].fAEDLRR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"0.4815"	"0.0000"	"1"	"1"	"1"	"379.21875"	"1135.64170"	"1135.64212"	"-0.38"	"-0.00014"	"4/52"	"4"	"52"	"4197987.21209717"	"HCD"	"MS2"	"4.075568"	"200.1"	"100.000"	"37.5382"	"10264"	"10264"	"10248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"459.9"	""	"373.5"	""	"218.9"	""	"307.9"	"3.3"	"254.0"	"267.2"	""	"700"	"27"	"35.000"	"28.000"	"0.0704803487451836"	""	"0.00455"	"0.0532"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVQNYR"	"[R].nIVQNYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY2"	"Sideroflexin-3 OS=Rattus norvegicus OX=10116 GN=Sfxn3 PE=2 SV=1"	"Q9JHY2"	"Sideroflexin-3 OS=Rattus norvegicus OX=10116 GN=Sfxn3 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"568.32465"	"1135.64202"	"1135.64212"	"-0.09"	"-0.00005"	"5/62"	"5"	"62"	"2665411.80987549"	"HCD"	"MS2"	"6.438801"	"195.7"	"100.000"	"37.5496"	"10268"	"10268"	"10248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.7"	""	"240.6"	""	"273.8"	""	"321.9"	""	"388.4"	"400.9"	""	"703"	"14"	"35.000"	"28.000"	"1.30895684748481"	"16"	"0.009846"	"0.1331"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSLAELQ"	"[K].fVSLAELQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"568.33130"	"1135.65532"	"1135.65604"	"-0.63"	"-0.00036"	"6/62"	"6"	"62"	"422717.90423584"	"HCD"	"MS2"	"1.927087"	"12.8"	"100.000"	"113.5122"	"40927"	"40927"	"40905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"13.8"	""	"12.2"	""	"19.4"	"3.0"	"28.1"	"27.0"	""	"571"	"52"	"34.000"	"27.000"	"0.000193466650422848"	"26"	"9.9E-05"	"0.0007486"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSLAELQ"	"[K].fVSLAELQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"568.33136"	"1135.65544"	"1135.65604"	"-0.53"	"-0.00030"	"6/62"	"6"	"62"	"481375.208740234"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"113.5700"	"40964"	"40964"	"40943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	"2.2"	"11.3"	""	"19.1"	""	"18.6"	"3.2"	"28.8"	"21.9"	""	"571"	"52"	"34.000"	"27.000"	"0.000183487343294009"	"27"	"0.0001991"	"0.002686"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGASEK"	"[K].sVGASEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"568.33868"	"1135.67009"	"1135.67231"	"-1.95"	"-0.00111"	"6/58"	"6"	"58"	"1626166.59429932"	"HCD"	"MS2"	"0"	"120.7"	"100.000"	"26.7607"	"5961"	"5961"	"5953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.6"	""	"117.7"	""	"116.0"	""	"226.2"	""	"296.7"	"267.4"	""	"468"	"21"	"33.000"	"26.000"	"0.203805480049723"	"24"	"0.002373"	"0.02245"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGASEK"	"[K].sVGASEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"568.33893"	"1135.67058"	"1135.67231"	"-1.52"	"-0.00086"	"6/58"	"6"	"58"	"1747857.88336182"	"HCD"	"MS2"	"0"	"136.7"	"100.000"	"26.9794"	"6009"	"6009"	"5996"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.8"	""	"123.7"	""	"150.7"	""	"268.5"	""	"320.8"	"301.9"	""	"468"	"23"	"33.000"	"26.000"	"0.12451333266843"	"23"	"0.002035"	"0.01835"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAGLDK"	"[R].sSAGLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"568.33929"	"1135.67131"	"1135.67231"	"-0.88"	"-0.00050"	"6/58"	"6"	"58"	"6374463.47247314"	"HCD"	"MS2"	"27.31625"	"481.0"	"100.000"	"33.4576"	"8611"	"8611"	"8588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"679.4"	""	"654.7"	""	"634.1"	""	"811.9"	""	"893.6"	"888.1"	""	"468"	"25"	"33.000"	"26.000"	"0.0791071716721997"	""	"0.00307"	"0.03428"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSAGLDK"	"[R].sSAGLDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"568.33942"	"1135.67156"	"1135.67231"	"-0.66"	"-0.00038"	"6/58"	"6"	"58"	"4817612.21252441"	"HCD"	"MS2"	"34.93734"	"362.1"	"100.000"	"33.2160"	"8550"	"8550"	"8532"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"526.1"	""	"471.7"	""	"495.3"	""	"550.7"	""	"685.9"	"706.5"	""	"468"	"11"	"33.000"	"26.000"	"1.982512149089"	"20"	"0.0073"	"0.09242"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLDVGHR"	"[R].iPLDVGHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80VJ4"	"Glycerophosphocholine phosphodiesterase GPCPD1 OS=Rattus norvegicus OX=10116 GN=Gpcpd1 PE=1 SV=1"	"Q80VJ4"	"Glycerophosphocholine phosphodiesterase GPCPD1 OS=Rattus norvegicus OX=10116 GN=Gpcpd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"379.23035"	"1135.67649"	"1135.67851"	"-1.78"	"-0.00067"	"8/56"	"8"	"56"	"679938.676391602"	"HCD"	"MS2"	"27.45176"	"19.1"	"100.000"	"48.8004"	"14832"	"14832"	"14803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"27.4"	""	"28.0"	""	"34.8"	""	"34.7"	"33.5"	""	"413"	"19"	"33.000"	"26.000"	"0.281138326929219"	"14"	"0.001103"	"0.009079"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLDVGHR"	"[R].iPLDVGHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80VJ4"	"Glycerophosphocholine phosphodiesterase GPCPD1 OS=Rattus norvegicus OX=10116 GN=Gpcpd1 PE=1 SV=1"	"Q80VJ4"	"Glycerophosphocholine phosphodiesterase GPCPD1 OS=Rattus norvegicus OX=10116 GN=Gpcpd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"379.23120"	"1135.67905"	"1135.67851"	"0.48"	"0.00018"	"8/56"	"8"	"56"	"722214.337158203"	"HCD"	"MS2"	"27.72221"	"25.2"	"100.000"	"48.4173"	"14712"	"14712"	"14686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"35.9"	""	"39.1"	""	"40.5"	""	"40.5"	"43.9"	""	"371"	"15"	"32.000"	"25.000"	"0.611426016089184"	"16"	"0.002559"	"0.02559"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGTPSAFDR"	"[R].gGTPSAFDR.[VI]"	"N-Term(TMT6plex)"	"3"	"3"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47858; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, muscle type OS=Rattus norvegicus OX=10116 GN=Pfkm PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"568.79828"	"1136.58928"	"1136.58975"	"-0.42"	"-0.00024"	"6/74"	"6"	"74"	"7157070.55389404"	"HCD"	"MS2"	"35.62317"	"461.9"	"100.000"	"32.9840"	"8456"	"8456"	"8431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"672.6"	""	"508.7"	""	"585.3"	""	"744.4"	""	"840.4"	"1043.5"	""	"585"	"24"	"34.000"	"27.000"	"0.129457098916068"	"20"	"0.0065"	"0.08083"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDFGYR"	"[K].lHDFGYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"3"	"3"	"0.4348"	"0.0000"	"1"	"1"	"1"	"379.53964"	"1136.60437"	"1136.60501"	"-0.56"	"-0.00021"	"5/48"	"5"	"48"	"2549747.30371094"	"HCD"	"MS2"	"25.36335"	"45.6"	"100.000"	"42.9433"	"12455"	"12455"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.8"	""	"68.8"	""	"59.4"	""	"83.9"	""	"74.5"	"84.9"	""	"672"	"23"	"35.000"	"28.000"	"0.183374641326667"	"27"	"0.0006415"	"0.007211"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"568.81055"	"1136.61382"	"1136.61490"	"-0.96"	"-0.00054"	"8/52"	"8"	"52"	"2837885.1348877"	"HCD"	"MS2"	"1.886604"	"142.7"	"100.000"	"71.8907"	"24208"	"24208"	"24191"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.2"	""	"176.3"	""	"166.7"	""	"224.8"	""	"294.1"	"282.4"	""	"699"	"35"	"35.000"	"28.000"	"0.0118426032570651"	"27"	"0.0007633"	"0.007386"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"568.81061"	"1136.61394"	"1136.61491"	"-0.85"	"-0.00048"	"10/62"	"10"	"62"	"711090.957946777"	"HCD"	"MS2"	"7.514203"	"41.4"	"100.000"	"91.1185"	"31970"	"31970"	"31951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.4"	""	"71.8"	""	"72.3"	""	"53.1"	"1.1"	"62.9"	"57.7"	""	"699"	"33"	"35.000"	"28.000"	"0.0181320613605672"	"21"	"0.0001991"	"0.00439"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"568.81085"	"1136.61443"	"1136.61490"	"-0.42"	"-0.00024"	"8/52"	"8"	"52"	"1613257.2557373"	"HCD"	"MS2"	"20.79596"	"77.9"	"100.000"	"71.2510"	"23946"	"23946"	"23934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.5"	""	"93.7"	""	"101.4"	""	"118.8"	""	"154.3"	"140.6"	""	"721"	"38"	"35.000"	"28.000"	"0.0053199220524596"	"28"	"0.0005161"	"0.006568"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"568.81091"	"1136.61455"	"1136.61490"	"-0.31"	"-0.00018"	"8/52"	"8"	"52"	"2098436.28826904"	"HCD"	"MS2"	"13.88804"	"103.3"	"100.000"	"71.3357"	"24012"	"24012"	"23996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.5"	""	"120.7"	""	"143.5"	""	"156.4"	""	"206.7"	"193.7"	""	"721"	"38"	"35.000"	"28.000"	"0.00534447769695116"	"28"	"0.0001991"	"0.005487"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"568.81091"	"1136.61455"	"1136.61490"	"-0.31"	"-0.00018"	"8/52"	"8"	"52"	"2394743.83117676"	"HCD"	"MS2"	"0.7570232"	"119.4"	"100.000"	"71.9661"	"24269"	"24269"	"24250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.0"	""	"143.5"	""	"146.6"	""	"178.2"	""	"230.4"	"246.7"	""	"721"	"38"	"35.000"	"28.000"	"0.00519882584224716"	"28"	"0.0001991"	"0.004514"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"568.81091"	"1136.61455"	"1136.61490"	"-0.31"	"-0.00018"	"8/52"	"8"	"52"	"7682668.6116333"	"HCD"	"MS2"	"0"	"198.7"	"100.000"	"71.5547"	"24070"	"24070"	"24052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.0"	""	"254.0"	""	"252.5"	""	"301.2"	"0.9"	"377.7"	"381.8"	""	"721"	"35"	"35.000"	"28.000"	"0.0117734913498127"	"27"	"0.002189"	"0.0204"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"568.81110"	"1136.61492"	"1136.61491"	"0.01"	"0.00001"	"10/62"	"10"	"62"	"424974.95501709"	"HCD"	"MS2"	"13.59497"	"28.1"	"100.000"	"90.7642"	"31865"	"31865"	"31849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"42.6"	""	"43.5"	""	"34.6"	""	"52.5"	"48.0"	""	"740"	"25"	"35.000"	"28.000"	"0.104761503844577"	"22"	"0.002525"	"0.02463"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"568.81110"	"1136.61492"	"1136.61491"	"0.01"	"0.00001"	"5/62"	"5"	"62"	"451651.804199219"	"HCD"	"MS2"	"24.29977"	"28.2"	"100.000"	"90.8251"	"31852"	"31852"	"31831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.2"	""	"40.2"	""	"47.5"	""	"42.9"	""	"49.3"	"53.5"	""	"740"	"27"	"35.000"	"28.000"	"0.074165465012511"	"21"	"0.00192"	"0.01611"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"568.81116"	"1136.61504"	"1136.61491"	"0.12"	"0.00007"	"4/62"	"4"	"62"	"241599.223205566"	"HCD"	"MS2"	"9.813578"	"19.1"	"100.000"	"91.3584"	"32068"	"32068"	"32042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"26.1"	""	"35.3"	""	"28.8"	"1.2"	"34.9"	"27.0"	""	"740"	"12"	"35.000"	"28.000"	"2.45020106369652"	"18"	"0.005832"	"0.07148"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"568.81122"	"1136.61516"	"1136.61491"	"0.22"	"0.00013"	"9/62"	"9"	"62"	"1332456.88067627"	"HCD"	"MS2"	"27.49871"	"56.3"	"100.000"	"100.5088"	"35772"	"35772"	"35755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.6"	""	"74.3"	""	"72.3"	""	"90.1"	""	"106.7"	"111.1"	""	"740"	"27"	"35.000"	"28.000"	"0.067174079522606"	"21"	"0.001348"	"0.01095"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIFEDDR"	"[K].iIFEDDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"P62959"	"Histidine triad nucleotide-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hint1 PE=1 SV=5"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"568.81134"	"1136.61540"	"1136.61490"	"0.44"	"0.00025"	"8/52"	"8"	"52"	"8012261.50213623"	"HCD"	"MS2"	"0"	"201.6"	"100.000"	"71.6489"	"24140"	"24140"	"24123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"318.9"	""	"251.0"	""	"259.3"	""	"312.7"	"0.5"	"385.2"	"385.2"	""	"740"	"35"	"35.000"	"28.000"	"0.0119729653063963"	"27"	"0.001488"	"0.0127"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDEILR"	"[R].nFDEILR.[V]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"568.81146"	"1136.61565"	"1136.61491"	"0.65"	"0.00037"	"9/62"	"9"	"62"	"1328564.41607666"	"HCD"	"MS2"	"38.11926"	"54.1"	"100.000"	"100.5538"	"35818"	"35818"	"35801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"64.7"	""	"79.1"	""	"90.9"	"1.7"	"93.6"	"105.9"	""	"741"	"27"	"35.000"	"28.000"	"0.0720755910241197"	"20"	"0.001488"	"0.01283"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPPVGGHR"	"[R].mGPPVGGHR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"379.54437"	"1136.61856"	"1136.61961"	"-0.92"	"-0.00035"	"7/66"	"7"	"66"	"6438660.80633545"	"HCD"	"MS2"	"38.00202"	"174.7"	"100.000"	"24.5690"	"5060"	"5060"	"5039"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.1"	""	"208.2"	""	"249.3"	""	"271.7"	"5.1"	"400.5"	"333.2"	""	"696"	"22"	"35.000"	"28.000"	"0.205389975899802"	"26"	"0.000885"	"0.007757"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPPVGGHR"	"[R].mGPPVGGHR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"379.54440"	"1136.61866"	"1136.61961"	"-0.84"	"-0.00032"	"7/66"	"7"	"66"	"7593290.67181396"	"HCD"	"MS2"	"39.5108"	"200.8"	"100.000"	"24.4676"	"5056"	"5056"	"5034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.2"	""	"227.1"	""	"295.4"	""	"297.7"	"2.8"	"480.5"	"396.7"	""	"696"	"22"	"35.000"	"28.000"	"0.20633801295384"	"26"	"0.002525"	"0.02447"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDYGGVAR"	"[K].gLDYGGVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"568.81641"	"1136.62554"	"1136.62614"	"-0.53"	"-0.00030"	"8/64"	"8"	"64"	"5795919.72106934"	"HCD"	"MS2"	"0.8736683"	"285.9"	"100.000"	"45.9646"	"13686"	"13686"	"13669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"369.6"	""	"359.0"	""	"380.9"	""	"487.3"	""	"572.1"	"543.8"	""	"653"	"36"	"35.000"	"28.000"	"0.00827719497857566"	""	"9.9E-05"	"0.00072"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDYGGVAR"	"[K].gLDYGGVAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"568.81659"	"1136.62590"	"1136.62614"	"-0.21"	"-0.00012"	"8/64"	"8"	"64"	"6017479.19299316"	"HCD"	"MS2"	"11.1935"	"318.9"	"100.000"	"45.6621"	"13596"	"13596"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"440.3"	""	"397.4"	""	"439.2"	""	"523.2"	""	"637.2"	"591.3"	""	"660"	"35"	"35.000"	"28.000"	"0.0096053664896198"	""	"9.9E-05"	"0.0006273"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSNPSHR"	"[R].iPSNPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"379.55023"	"1136.63614"	"1136.63737"	"-1.08"	"-0.00041"	"7/70"	"7"	"70"	"5217671.48748779"	"HCD"	"MS2"	"30.87978"	"187.0"	"100.000"	"23.7241"	"4714"	"4714"	"4699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"282.4"	""	"212.8"	""	"244.3"	""	"301.8"	""	"352.0"	"382.2"	""	"639"	"28"	"35.000"	"28.000"	"0.0568160271507436"	"26"	"0.0001991"	"0.004188"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSNPSHR"	"[R].iPSNPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"O35568"	"EGF-containing fibulin-like extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Efemp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"379.55026"	"1136.63623"	"1136.63737"	"-1.00"	"-0.00038"	"6/70"	"6"	"70"	"4728264.66357422"	"HCD"	"MS2"	"27.61287"	"194.9"	"100.000"	"23.6684"	"4729"	"4729"	"4714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.3"	""	"228.2"	""	"250.6"	""	"301.7"	""	"397.7"	"396.4"	""	"639"	"22"	"35.000"	"28.000"	"0.211091556638427"	"15"	"0.001049"	"0.008841"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMVMEIR"	"[R].lMVmEIR.[N]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"568.82190"	"1136.63652"	"1136.63690"	"-0.34"	"-0.00019"	"4/48"	"4"	"48"	"765435.318603516"	"HCD"	"MS2"	"21.13488"	"48.3"	"100.000"	"67.2747"	"22332"	"22332"	"22311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"64.4"	""	"78.3"	""	"81.6"	"0.0"	"88.0"	"71.1"	""	"639"	"16"	"35.000"	"28.000"	"0.789715864332654"	"16"	"0.009382"	"0.1221"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"568.82892"	"1136.65056"	"1136.65129"	"-0.64"	"-0.00037"	"9/56"	"9"	"56"	"5623677.96246338"	"HCD"	"MS2"	"2.550403"	"253.3"	"100.000"	"88.1819"	"30788"	"30788"	"30772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"476.4"	""	"154.0"	""	"141.3"	""	"74.0"	""	"85.7"	"1490.9"	""	"572"	"28"	"34.000"	"27.000"	"0.0476832702789604"	"19"	"0.002525"	"0.0252"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"568.82898"	"1136.65068"	"1136.65129"	"-0.53"	"-0.00030"	"9/56"	"9"	"56"	"1717464.60314941"	"HCD"	"MS2"	"3.030156"	"86.3"	"100.000"	"88.4952"	"30915"	"30915"	"30900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.4"	""	"52.5"	""	"55.2"	""	"33.4"	""	"61.6"	"481.3"	""	"572"	"33"	"34.000"	"27.000"	"0.0158258131235701"	"22"	"0.001615"	"0.01457"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"568.82904"	"1136.65080"	"1136.65129"	"-0.43"	"-0.00024"	"9/56"	"9"	"56"	"5570579.98907471"	"HCD"	"MS2"	"0.8217562"	"254.1"	"100.000"	"88.1573"	"30817"	"30817"	"30799"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"457.2"	""	"149.0"	""	"161.4"	""	"66.1"	""	"88.4"	"1502.1"	""	"572"	"28"	"34.000"	"27.000"	"0.0479033662543561"	"19"	"0.002799"	"0.02945"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"568.82910"	"1136.65093"	"1136.65129"	"-0.32"	"-0.00018"	"9/56"	"9"	"56"	"2570072.9175415"	"HCD"	"MS2"	"11.94423"	"115.3"	"100.000"	"87.8557"	"30695"	"30695"	"30681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.8"	""	"70.8"	""	"78.7"	""	"34.6"	""	"49.2"	"650.2"	""	"572"	"31"	"34.000"	"27.000"	"0.0251400439813633"	"25"	"0.002084"	"0.01868"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"568.82935"	"1136.65141"	"1136.65129"	"0.11"	"0.00006"	"9/56"	"9"	"56"	"1418002.61456299"	"HCD"	"MS2"	"6.716827"	"72.5"	"100.000"	"88.4567"	"30938"	"30938"	"30928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.0"	""	"52.0"	""	"50.0"	""	"33.3"	""	"47.5"	"397.3"	""	"592"	"30"	"34.000"	"27.000"	"0.027182644855914"	"20"	"0.00212"	"0.01907"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"568.82947"	"1136.65166"	"1136.65129"	"0.32"	"0.00018"	"9/56"	"9"	"56"	"1901979.76275635"	"HCD"	"MS2"	"11.79466"	"90.7"	"100.000"	"87.8911"	"30672"	"30672"	"30663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.0"	""	"64.3"	""	"62.8"	""	"36.8"	""	"40.2"	"503.7"	""	"592"	"29"	"34.000"	"27.000"	"0.0377825887408158"	"24"	"0.00212"	"0.01948"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEILTR"	"[K].fEEILTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"568.82971"	"1136.65215"	"1136.65129"	"0.75"	"0.00043"	"5/56"	"5"	"56"	"245573.217895508"	"HCD"	"MS2"	"35.81021"	"16.7"	"100.000"	"88.8269"	"31049"	"31049"	"31025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.9"	""	"18.0"	""	"18.6"	""	"21.4"	""	"25.6"	"57.6"	""	"593"	"8"	"34.000"	"27.000"	"4.60282748452572"	"15"	"0.009514"	"0.1275"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGLSYIR"	"[R].qAGLSYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"568.83429"	"1136.66130"	"1136.66252"	"-1.07"	"-0.00061"	"6/70"	"6"	"70"	"6056837.14080811"	"HCD"	"MS2"	"0"	"415.1"	"100.000"	"48.3573"	"14651"	"14651"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"607.5"	""	"581.5"	""	"591.1"	""	"707.0"	"10.2"	"716.1"	"715.9"	""	"446"	"14"	"33.000"	"26.000"	"0.820927611222845"	"25"	"0.001615"	"0.01394"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGLSYIR"	"[R].qAGLSYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"568.83447"	"1136.66167"	"1136.66252"	"-0.75"	"-0.00043"	"6/70"	"6"	"70"	"2613341.16162109"	"HCD"	"MS2"	"31.82563"	"157.1"	"100.000"	"48.0766"	"14537"	"14537"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.8"	""	"223.5"	""	"210.6"	""	"249.3"	""	"299.8"	"319.6"	""	"446"	"30"	"33.000"	"26.000"	"0.0223514068091372"	"18"	"0.0001991"	"0.002786"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGLSYIR"	"[R].qAGLSYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"568.83496"	"1136.66265"	"1136.66252"	"0.11"	"0.00006"	"6/70"	"6"	"70"	"2478979.82012939"	"HCD"	"MS2"	"26.49609"	"154.6"	"100.000"	"47.7727"	"14451"	"14451"	"14426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.7"	""	"206.7"	""	"199.9"	""	"251.8"	""	"318.3"	"305.4"	""	"447"	"34"	"33.000"	"26.000"	"0.0089800246224738"	"20"	"0.0001991"	"0.002203"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSASGTK"	"[K].qSASGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"568.83612"	"1136.66496"	"1136.66756"	"-2.28"	"-0.00130"	"6/68"	"6"	"68"	"5450542.94281006"	"HCD"	"MS2"	"0"	"390.3"	"100.000"	"20.2003"	"3394"	"3394"	"3372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"582.6"	""	"441.7"	""	"459.8"	""	"663.7"	"3.6"	"766.3"	"784.6"	""	"466"	"23"	"33.000"	"26.000"	"0.118401150116611"	"20"	"0.004751"	"0.0559"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSASGTK"	"[K].qSASGTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3;ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P30835; P47860"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3; ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"568.83698"	"1136.66667"	"1136.66756"	"-0.78"	"-0.00044"	"6/68"	"6"	"68"	"8570857.4230957"	"HCD"	"MS2"	"0"	"633.8"	"100.000"	"20.2517"	"3374"	"3374"	"3359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"927.4"	""	"729.6"	""	"744.9"	""	"1084.9"	"1.3"	"1248.0"	"1276.9"	""	"466"	"32"	"33.000"	"26.000"	"0.0136570192331769"	"21"	"0.002328"	"0.0221"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"569.30823"	"1137.60918"	"1137.61015"	"-0.86"	"-0.00049"	"6/62"	"6"	"62"	"4934776.46710205"	"HCD"	"MS2"	"0"	"263.9"	"100.000"	"36.8766"	"9994"	"9994"	"9977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"386.5"	""	"367.9"	""	"390.2"	""	"374.0"	""	"483.7"	"501.4"	""	"713"	"32"	"35.000"	"28.000"	"0.0207042514846348"	""	"0.0001991"	"0.002285"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"569.30835"	"1137.60942"	"1137.61015"	"-0.64"	"-0.00037"	"6/62"	"6"	"62"	"4303885.72052002"	"HCD"	"MS2"	"0"	"220.2"	"100.000"	"36.5709"	"9869"	"9869"	"9854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"329.7"	""	"314.2"	""	"306.1"	""	"327.1"	""	"406.9"	"403.7"	""	"728"	"33"	"35.000"	"28.000"	"0.0204221463275819"	"28"	"0.0001991"	"0.004087"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4865"	"0.0000"	"1"	"1"	"1"	"569.30841"	"1137.60954"	"1137.61015"	"-0.54"	"-0.00030"	"6/62"	"6"	"62"	"4787779.77227783"	"HCD"	"MS2"	"0"	"241.4"	"100.000"	"36.4634"	"9863"	"9863"	"9846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"376.1"	""	"339.1"	""	"350.2"	""	"356.2"	"3.5"	"431.1"	"428.9"	""	"728"	"37"	"35.000"	"28.000"	"0.00729627817960919"	""	"0.0001991"	"0.003318"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYEAGER"	"[R].aLYEAGER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"569.30847"	"1137.60967"	"1137.61015"	"-0.43"	"-0.00024"	"6/62"	"6"	"62"	"5574002.03656006"	"HCD"	"MS2"	"0"	"291.6"	"100.000"	"36.7553"	"9982"	"9982"	"9965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"453.6"	""	"387.8"	""	"419.1"	""	"441.0"	""	"527.8"	"532.7"	""	"728"	"33"	"35.000"	"28.000"	"0.0203283150884206"	""	"0.0001991"	"0.00265"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYESQR"	"[R].iLYESQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11960"	"2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus OX=10116 GN=Bckdha PE=1 SV=1"	"P11960"	"2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus OX=10116 GN=Bckdha PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"569.32562"	"1137.64397"	"1137.64654"	"-2.26"	"-0.00129"	"5/52"	"5"	"52"	"2114083.97705078"	"HCD"	"MS2"	"12.81691"	"141.3"	"100.000"	"44.7123"	"13209"	"13209"	"13188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"206.5"	""	"176.8"	""	"196.3"	""	"202.6"	"2.5"	"264.7"	"290.8"	""	"566"	"24"	"34.000"	"27.000"	"0.112405208499851"	"26"	"0.005832"	"0.07196"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"569.32617"	"1137.64507"	"1137.64654"	"-1.29"	"-0.00074"	"5/66"	"5"	"66"	"1198388.05511475"	"HCD"	"MS2"	"14.38049"	"73.6"	"100.000"	"57.0720"	"18223"	"18223"	"18209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.2"	""	"90.9"	""	"90.1"	""	"145.2"	""	"141.7"	"154.7"	""	"540"	"33"	"34.000"	"27.000"	"0.0140076010510819"	"19"	"0.001103"	"0.009074"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"569.32617"	"1137.64507"	"1137.64654"	"-1.29"	"-0.00074"	"5/66"	"5"	"66"	"6257669.2041626"	"HCD"	"MS2"	"0"	"266.4"	"100.000"	"57.0615"	"18185"	"18185"	"18170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.1"	""	"345.7"	""	"348.4"	""	"358.8"	""	"499.9"	"620.7"	""	"540"	"35"	"34.000"	"27.000"	"0.00834379766778669"	"16"	"0.002628"	"0.02757"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"569.32617"	"1137.64507"	"1137.64654"	"-1.29"	"-0.00074"	"5/66"	"5"	"66"	"6698315.75982666"	"HCD"	"MS2"	"0"	"290.2"	"100.000"	"56.7759"	"18103"	"18103"	"18085"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"384.5"	""	"385.8"	""	"387.6"	""	"372.2"	""	"558.7"	"672.9"	""	"540"	"32"	"34.000"	"27.000"	"0.0182963207054882"	"15"	"0.002462"	"0.02301"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTLDYLR"	"[K].qTLDYLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"Q5M7W1"	"Thioredoxin-interacting protein OS=Rattus norvegicus OX=10116 GN=Txnip PE=2 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"569.32629"	"1137.64531"	"1137.64654"	"-1.08"	"-0.00061"	"6/64"	"6"	"64"	"887838.282897949"	"HCD"	"MS2"	"21.13889"	"60.5"	"100.000"	"58.0500"	"18587"	"18587"	"18562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.4"	""	"76.5"	""	"63.2"	""	"104.8"	""	"132.5"	"115.9"	""	"538"	"14"	"34.000"	"27.000"	"1.08081728118365"	"25"	"0.00455"	"0.05393"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGITGLYR"	"[R].eGITGLYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"569.32648"	"1137.64568"	"1137.64654"	"-0.76"	"-0.00043"	"6/62"	"6"	"62"	"2179221.77514648"	"HCD"	"MS2"	"11.2037"	"115.4"	"100.000"	"57.7323"	"18457"	"18457"	"18439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.7"	""	"147.7"	""	"147.8"	""	"230.1"	"1.1"	"220.0"	"215.0"	""	"538"	"35"	"34.000"	"27.000"	"0.00770463873904871"	"18"	"0.0001991"	"0.00199"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"569.32654"	"1137.64580"	"1137.64654"	"-0.65"	"-0.00037"	"5/66"	"5"	"66"	"1119592.24920654"	"HCD"	"MS2"	"21.78489"	"73.2"	"100.000"	"57.3530"	"18302"	"18302"	"18284"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.0"	""	"84.5"	""	"91.6"	""	"133.1"	""	"144.1"	"153.4"	""	"539"	"30"	"34.000"	"27.000"	"0.0298922612713217"	"19"	"0.0001991"	"0.005868"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYESQR"	"[R].iLYESQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11960"	"2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus OX=10116 GN=Bckdha PE=1 SV=1"	"P11960"	"2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus OX=10116 GN=Bckdha PE=1 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"569.32666"	"1137.64604"	"1137.64654"	"-0.44"	"-0.00025"	"5/52"	"5"	"52"	"1893419.43200684"	"HCD"	"MS2"	"0"	"122.9"	"100.000"	"44.8220"	"13220"	"13220"	"13195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.8"	""	"175.9"	""	"169.6"	""	"185.3"	""	"231.4"	"237.4"	""	"538"	"27"	"34.000"	"27.000"	"0.0573789081636429"	""	"0.004213"	"0.04745"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGITGLYR"	"[R].eGITGLYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"569.32672"	"1137.64617"	"1137.64654"	"-0.33"	"-0.00019"	"6/62"	"6"	"62"	"2168541.42840576"	"HCD"	"MS2"	"19.32824"	"116.9"	"100.000"	"57.4768"	"18389"	"18389"	"18372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.0"	""	"157.7"	""	"159.8"	""	"239.3"	""	"206.1"	"204.1"	""	"538"	"35"	"34.000"	"27.000"	"0.00926301313753381"	"19"	"0.0001686"	"0.001915"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"569.32739"	"1137.64751"	"1137.64654"	"0.85"	"0.00048"	"5/66"	"5"	"66"	"2390891.25238037"	"HCD"	"MS2"	"26.36636"	"116.9"	"100.000"	"56.7542"	"18059"	"18059"	"18043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.4"	""	"146.7"	""	"150.0"	""	"175.9"	""	"228.7"	"258.4"	""	"533"	"19"	"34.000"	"27.000"	"0.301784696802276"	"18"	"0.002875"	"0.0311"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQIYTR"	"[R].dLQIYTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.32745"	"1137.64763"	"1137.64654"	"0.96"	"0.00055"	"5/66"	"5"	"66"	"2634580.97174072"	"HCD"	"MS2"	"33.11267"	"126.0"	"100.000"	"56.4802"	"17984"	"17984"	"17968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.5"	""	"153.9"	""	"162.3"	""	"172.7"	""	"255.5"	"277.9"	""	"533"	"31"	"34.000"	"27.000"	"0.0220139113562318"	"15"	"0.00212"	"0.01958"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASATSK"	"[K].dASATSk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.32983"	"1137.65239"	"1137.65157"	"0.72"	"0.00041"	"10/58"	"10"	"58"	"751378.346618652"	"HCD"	"MS2"	"0"	"62.5"	"100.000"	"23.6225"	"4711"	"4711"	"4692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.2"	""	"71.8"	""	"59.5"	""	"123.4"	""	"128.5"	"138.3"	""	"554"	"6"	"34.000"	"27.000"	"6.70625045945922"	"13"	"0.008364"	"0.1071"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFDVGGQR"	"[RK].mFDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P29348; P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"569.79669"	"1138.58611"	"1138.58764"	"-1.35"	"-0.00077"	"6/58"	"6"	"58"	"5692441.11682129"	"HCD"	"MS2"	"37.47064"	"262.2"	"100.000"	"55.9326"	"17764"	"17764"	"17751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"316.1"	""	"315.0"	""	"306.5"	""	"394.0"	""	"569.7"	"592.5"	""	"559"	"26"	"34.000"	"27.000"	"0.0728419917224692"	"17"	"0.0003938"	"0.006309"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFDVGGQR"	"[RK].mFDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P29348; P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"569.79712"	"1138.58696"	"1138.58764"	"-0.60"	"-0.00034"	"6/58"	"6"	"58"	"5840670.80352783"	"HCD"	"MS2"	"31.69104"	"254.4"	"100.000"	"56.5411"	"17974"	"17974"	"17963"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.7"	""	"295.3"	""	"278.7"	""	"376.3"	""	"587.9"	"593.5"	""	"565"	"28"	"34.000"	"27.000"	"0.0462400667303356"	"18"	"0.0001991"	"0.0051"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFDVGGQR"	"[RK].mFDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P29348; P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"569.79718"	"1138.58708"	"1138.58764"	"-0.49"	"-0.00028"	"6/58"	"6"	"58"	"6115973.84429932"	"HCD"	"MS2"	"25.06485"	"275.7"	"100.000"	"56.2503"	"17858"	"17858"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"335.3"	""	"325.3"	""	"325.9"	""	"402.4"	""	"601.3"	"635.8"	""	"565"	"25"	"34.000"	"27.000"	"0.0826073046740743"	"17"	"0.0001991"	"0.004495"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFDVGGQR"	"[RK].mFDVGGQR.[S]"	"N-Term(TMT6plex)"	"3"	"4"	"P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3;Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"P29348; P08753; P04897; P10824"	"Guanine nucleotide-binding protein G(t) subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Gnat3 PE=1 SV=3; Guanine nucleotide-binding protein G(k) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnai3 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3; Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gnai1 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"569.79736"	"1138.58745"	"1138.58764"	"-0.17"	"-0.00010"	"6/58"	"6"	"58"	"6015917.78167725"	"HCD"	"MS2"	"20.09995"	"277.9"	"100.000"	"56.2326"	"17884"	"17884"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"313.2"	""	"331.0"	""	"282.0"	""	"418.1"	""	"637.9"	"671.6"	""	"565"	"27"	"34.000"	"27.000"	"0.0586163068681013"	"19"	"0.0001991"	"0.00369"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQGAMYR"	"[K].iAQGAMYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.81531"	"1138.62334"	"1138.62403"	"-0.61"	"-0.00035"	"6/68"	"6"	"68"	"5231996.43347168"	"HCD"	"MS2"	"33.67521"	"280.8"	"100.000"	"42.1777"	"12142"	"12142"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"474.2"	""	"426.0"	""	"410.1"	""	"316.3"	"0.2"	"490.5"	"540.3"	""	"510"	"31"	"34.000"	"27.000"	"0.018558385015689"	"14"	"0.0001686"	"0.001968"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQGAMYR"	"[K].iAQGAMYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.81555"	"1138.62383"	"1138.62403"	"-0.18"	"-0.00010"	"6/68"	"6"	"68"	"5526024.06518555"	"HCD"	"MS2"	"33.65372"	"306.9"	"100.000"	"42.0463"	"12123"	"12123"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"512.7"	""	"433.5"	""	"451.9"	""	"360.5"	"3.0"	"559.5"	"584.5"	""	"510"	"33"	"34.000"	"27.000"	"0.013413440292963"	"15"	"0.0001686"	"0.001799"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQGAMYR"	"[K].iAQGAMYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"569.81580"	"1138.62432"	"1138.62403"	"0.25"	"0.00014"	"6/68"	"6"	"68"	"4869096.94543457"	"HCD"	"MS2"	"4.890067"	"260.2"	"100.000"	"42.3474"	"12245"	"12245"	"12226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"428.9"	""	"378.5"	""	"380.3"	""	"284.0"	""	"477.3"	"519.6"	""	"520"	"31"	"34.000"	"27.000"	"0.0186197286655354"	"18"	"0.0001991"	"0.004488"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQGAMYR"	"[K].iAQGAMYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"569.81616"	"1138.62505"	"1138.62403"	"0.89"	"0.00051"	"6/68"	"6"	"68"	"5941159.55194092"	"HCD"	"MS2"	"5.875135"	"292.6"	"100.000"	"42.4604"	"12257"	"12257"	"12240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"476.5"	""	"437.0"	""	"431.9"	""	"300.1"	""	"543.0"	"585.3"	""	"518"	"30"	"34.000"	"27.000"	"0.0241156939746168"	"15"	"0.0001991"	"0.00507"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAWSGGGR"	"[K].gYAWSGGGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"Q07116"	"Sulfite oxidase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Suox PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"570.29242"	"1139.57756"	"1139.57952"	"-1.72"	"-0.00098"	"8/64"	"8"	"64"	"2312968.79309082"	"HCD"	"MS2"	"19.71663"	"164.8"	"100.000"	"40.6743"	"11570"	"11570"	"11547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.0"	""	"248.3"	""	"255.3"	""	"227.0"	""	"299.6"	"311.4"	""	"539"	"25"	"34.000"	"27.000"	"0.085814123210519"	"18"	"9.9E-05"	"0.000617"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"570.30554"	"1139.60381"	"1139.60467"	"-0.76"	"-0.00043"	"10/60"	"10"	"60"	"1304040.90905762"	"HCD"	"MS2"	"15.33553"	"69.9"	"100.000"	"62.8825"	"20550"	"20550"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.3"	""	"87.9"	""	"102.6"	""	"113.8"	""	"133.3"	"123.7"	""	"547"	"15"	"34.000"	"27.000"	"0.807155723493257"	"20"	"0.0001991"	"0.003631"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"570.30566"	"1139.60405"	"1139.60467"	"-0.55"	"-0.00031"	"5/60"	"5"	"60"	"1273434.07476807"	"HCD"	"MS2"	"16.87112"	"66.7"	"100.000"	"62.8047"	"20551"	"20551"	"20536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.0"	""	"81.4"	""	"103.1"	""	"113.6"	""	"118.1"	"130.6"	""	"546"	"23"	"34.000"	"27.000"	"0.129170293696484"	"22"	"0.0007633"	"0.007305"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"570.30566"	"1139.60405"	"1139.60467"	"-0.55"	"-0.00031"	"7/60"	"7"	"60"	"4031669.09765625"	"HCD"	"MS2"	"16.97632"	"190.7"	"100.000"	"62.2858"	"20307"	"20307"	"20288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.1"	""	"252.8"	""	"283.0"	""	"319.1"	""	"323.5"	"362.5"	""	"546"	"30"	"34.000"	"27.000"	"0.02774358931537"	""	"0.0001991"	"0.00288"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"570.30573"	"1139.60417"	"1139.60467"	"-0.44"	"-0.00025"	"7/60"	"7"	"60"	"4496416.52545166"	"HCD"	"MS2"	"1.612829"	"216.3"	"100.000"	"62.5285"	"20439"	"20439"	"20424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.6"	""	"273.5"	""	"304.2"	""	"385.1"	"0.7"	"388.9"	"396.9"	""	"546"	"28"	"34.000"	"27.000"	"0.0419916216802728"	""	"0.0001991"	"0.003235"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"570.30573"	"1139.60417"	"1139.60467"	"-0.44"	"-0.00025"	"7/60"	"7"	"60"	"4630038.53118896"	"HCD"	"MS2"	"21.54851"	"133.2"	"100.000"	"62.2265"	"20316"	"20316"	"20297"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.9"	""	"183.4"	""	"184.6"	""	"226.9"	""	"236.2"	"240.0"	""	"546"	"28"	"34.000"	"27.000"	"0.0483239745620656"	""	"0.0001991"	"0.002898"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFPASADR"	"[K].fFPASADR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"570.30603"	"1139.60478"	"1139.60467"	"0.10"	"0.00005"	"7/60"	"7"	"60"	"4810558.15557861"	"HCD"	"MS2"	"2.172041"	"232.5"	"100.000"	"62.5853"	"20429"	"20429"	"20411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"326.0"	""	"310.4"	""	"354.1"	""	"392.4"	""	"382.1"	"437.1"	""	"528"	"28"	"34.000"	"27.000"	"0.04483363242499"	""	"0.0001991"	"0.003495"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDMLNR"	"[R].vFDmLNR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"570.30713"	"1139.60698"	"1139.60805"	"-0.93"	"-0.00053"	"6/50"	"6"	"50"	"2240332.25531006"	"HCD"	"MS2"	"0"	"82.1"	"100.000"	"60.7844"	"19733"	"19733"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.6"	""	"82.0"	""	"109.8"	""	"216.0"	"0.3"	"134.0"	"140.4"	""	"538"	"17"	"34.000"	"27.000"	"0.500901439762312"	"16"	"0.004234"	"0.04845"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDMLNR"	"[R].vFDmLNR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"570.30737"	"1139.60747"	"1139.60805"	"-0.51"	"-0.00029"	"5/50"	"5"	"50"	"1708937.80755615"	"HCD"	"MS2"	"7.708673"	"72.9"	"100.000"	"59.7415"	"19276"	"19276"	"19258"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.2"	""	"91.3"	""	"105.0"	""	"173.2"	""	"119.1"	"114.1"	""	"538"	"23"	"34.000"	"27.000"	"0.133891275859334"	"20"	"0.007178"	"0.09199"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDMLNR"	"[R].vFDmLNR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"570.30737"	"1139.60747"	"1139.60805"	"-0.51"	"-0.00029"	"6/50"	"6"	"50"	"1702436.7522583"	"HCD"	"MS2"	"10.81278"	"67.6"	"100.000"	"60.5014"	"19618"	"19618"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.8"	""	"83.1"	""	"79.5"	""	"174.6"	"0.7"	"120.1"	"107.9"	""	"538"	"21"	"34.000"	"27.000"	"0.238644967238212"	"18"	"0.005832"	"0.07195"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFDMLNR"	"[R].vFDmLNR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"570.30743"	"1139.60759"	"1139.60805"	"-0.40"	"-0.00023"	"5/50"	"5"	"50"	"2222235.05126953"	"HCD"	"MS2"	"5.615965"	"82.2"	"100.000"	"59.8911"	"19370"	"19370"	"19353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.6"	""	"91.2"	""	"133.8"	""	"194.7"	""	"136.8"	"129.6"	""	"538"	"22"	"34.000"	"27.000"	"0.169727525665172"	"20"	"0.008364"	"0.1069"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"570.31573"	"1139.62419"	"1139.62580"	"-1.41"	"-0.00081"	"6/64"	"6"	"64"	"1743051.21264648"	"HCD"	"MS2"	"16.56954"	"128.1"	"100.000"	"43.3598"	"12659"	"12659"	"12635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.8"	""	"174.1"	""	"171.3"	""	"208.7"	"0.3"	"235.9"	"256.8"	""	"484"	"30"	"33.000"	"26.000"	"0.023978133066405"	"19"	"0.0001991"	"0.002271"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"570.31604"	"1139.62480"	"1139.62580"	"-0.88"	"-0.00050"	"6/64"	"6"	"64"	"1590779.27386475"	"HCD"	"MS2"	"16.1959"	"130.2"	"100.000"	"43.5275"	"12693"	"12693"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.7"	""	"166.5"	""	"180.1"	""	"200.0"	"5.2"	"268.8"	"255.5"	""	"482"	"30"	"33.000"	"26.000"	"0.024775192784848"	"19"	"0.0001991"	"0.002268"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"570.31934"	"1139.63140"	"1139.62580"	"4.91"	"0.00280"	"6/64"	"6"	"64"	"2186994.89422607"	"HCD"	"MS2"	"13.21506"	"141.3"	"100.000"	"43.0583"	"12536"	"12536"	"12507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.1"	""	"179.9"	""	"190.3"	""	"227.4"	"4.2"	"241.7"	"292.1"	""	"487"	"36"	"33.000"	"26.000"	"0.00618726853801256"	"19"	"0.0001686"	"0.00128"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTYGSDR"	"[K].lVTYGSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"570.31989"	"1139.63249"	"1139.62580"	"5.87"	"0.00334"	"6/64"	"6"	"64"	"1922750.42456055"	"HCD"	"MS2"	"22.19679"	"129.6"	"100.000"	"43.1987"	"12559"	"12559"	"12530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.4"	""	"149.4"	""	"166.5"	""	"217.5"	""	"246.1"	"279.8"	""	"479"	"36"	"33.000"	"26.000"	"0.00671901356289435"	"19"	"0.0001686"	"0.001578"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAQAPK"	"[K].aPAQAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"570.85992"	"1140.71257"	"1140.71411"	"-1.35"	"-0.00077"	"6/56"	"6"	"56"	"3719503.50878906"	"HCD"	"MS2"	"29.07313"	"183.4"	"100.000"	"29.1176"	"6905"	"6905"	"6889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.0"	""	"260.2"	""	"277.9"	""	"379.7"	"0.5"	"321.1"	"286.6"	""	"191"	"30"	"29.000"	"22.000"	"0.00895371716614216"	"17"	"0.0001991"	"0.00561"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAQAPK"	"[K].aPAQAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"570.86011"	"1140.71294"	"1140.71411"	"-1.03"	"-0.00059"	"6/56"	"6"	"56"	"2844549.70330811"	"HCD"	"MS2"	"36.99695"	"149.8"	"100.000"	"29.3706"	"6968"	"6968"	"6946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.4"	""	"185.6"	""	"230.3"	""	"323.3"	"5.6"	"265.4"	"231.3"	""	"191"	"22"	"29.000"	"22.000"	"0.0553354405087671"	"17"	"0.002588"	"0.02696"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAQAPK"	"[K].aPAQAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"570.86060"	"1140.71391"	"1140.71411"	"-0.18"	"-0.00010"	"6/56"	"6"	"56"	"4908769.98492432"	"HCD"	"MS2"	"9.77494"	"262.8"	"100.000"	"28.8277"	"6788"	"6788"	"6764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"370.0"	""	"364.2"	""	"369.5"	""	"501.1"	""	"491.2"	"392.3"	""	"187"	"34"	"29.000"	"22.000"	"0.00379150480644239"	"19"	"0.001827"	"0.01535"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAQAPK"	"[K].aPAQAPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"P25886"	"60S ribosomal protein L29 OS=Rattus norvegicus OX=10116 GN=Rpl29 PE=1 SV=3"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"570.86066"	"1140.71404"	"1140.71411"	"-0.07"	"-0.00004"	"6/56"	"6"	"56"	"5216467.49664307"	"HCD"	"MS2"	"26.6798"	"283.8"	"100.000"	"29.0420"	"6834"	"6834"	"6811"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"412.8"	""	"421.6"	""	"393.8"	""	"532.6"	""	"511.7"	"416.9"	""	"187"	"37"	"29.000"	"22.000"	"0.00186127957195302"	"21"	"0.002189"	"0.02056"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEMGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.29626"	"1141.58525"	"1141.58731"	"-1.80"	"-0.00103"	"7/60"	"7"	"60"	"555285.010131836"	"HCD"	"MS2"	"10.52782"	"52.8"	"100.000"	"40.0189"	"11303"	"11303"	"11282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.6"	""	"64.7"	""	"79.5"	""	"66.9"	""	"107.0"	"113.2"	""	"431"	"25"	"33.000"	"26.000"	"0.0726854150159862"	"14"	"0.001615"	"0.01403"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEMGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"571.29633"	"1141.58537"	"1141.58731"	"-1.70"	"-0.00097"	"7/60"	"7"	"60"	"2933163.76165771"	"HCD"	"MS2"	"17.20833"	"179.6"	"100.000"	"39.7817"	"11173"	"11173"	"11159"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.0"	""	"244.1"	""	"238.2"	""	"212.2"	""	"364.5"	"379.9"	""	"432"	"23"	"33.000"	"26.000"	"0.10338409994169"	"16"	"0.003984"	"0.04361"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEMGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"571.29651"	"1141.58574"	"1141.58731"	"-1.37"	"-0.00078"	"7/60"	"7"	"60"	"3054758.02947998"	"HCD"	"MS2"	"9.92167"	"191.7"	"100.000"	"39.7067"	"11177"	"11177"	"11162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.7"	""	"267.2"	""	"250.9"	""	"225.3"	"0.3"	"404.0"	"412.1"	""	"432"	"25"	"33.000"	"26.000"	"0.0634532324823691"	"21"	"0.002525"	"0.02436"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYTGEMGR"	"[K].vYTGEMGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"571.29669"	"1141.58611"	"1141.58731"	"-1.05"	"-0.00060"	"7/60"	"7"	"60"	"651429.969177246"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"40.0803"	"11294"	"11294"	"11272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.1"	""	"79.7"	""	"75.5"	""	"79.2"	""	"105.8"	"109.4"	""	"430"	"24"	"33.000"	"26.000"	"0.0823073198131169"	"18"	"0.001718"	"0.01513"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.32373"	"1141.64018"	"1141.64145"	"-1.11"	"-0.00063"	"7/62"	"7"	"62"	"6280290.70507813"	"HCD"	"MS2"	"0"	"213.7"	"100.000"	"24.8145"	"5160"	"5160"	"5135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.3"	""	"204.2"	""	"139.6"	""	"321.3"	""	"281.8"	"853.0"	""	"403"	"52"	"33.000"	"26.000"	"0.000123958139851038"	"16"	"0.0001991"	"0.003088"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"571.32410"	"1141.64092"	"1141.64145"	"-0.47"	"-0.00027"	"6/62"	"6"	"62"	"1536577.63171387"	"HCD"	"MS2"	"42.36446"	"91.6"	"100.000"	"25.0088"	"5273"	"5273"	"5259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.1"	""	"86.4"	""	"93.0"	""	"164.2"	""	"172.2"	"225.8"	""	"403"	"20"	"33.000"	"26.000"	"0.198278237810869"	"16"	"0.008868"	"0.1124"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"571.32416"	"1141.64104"	"1141.64145"	"-0.36"	"-0.00021"	"7/62"	"7"	"62"	"6326075.91223145"	"HCD"	"MS2"	"6.66051"	"210.0"	"100.000"	"24.6763"	"5141"	"5141"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.0"	""	"206.9"	""	"123.0"	""	"330.2"	""	"289.9"	"849.4"	""	"403"	"64"	"33.000"	"26.000"	"7.46921654391891E-06"	"21"	"0.0001686"	"0.001164"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].VHLTDAEk.[A]"	"K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"571.32422"	"1141.64116"	"1141.64145"	"-0.26"	"-0.00015"	"6/62"	"6"	"62"	"1813649.33874512"	"HCD"	"MS2"	"27.22603"	"94.5"	"100.000"	"25.0919"	"5270"	"5270"	"5260"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.8"	""	"78.4"	""	"92.3"	""	"175.4"	""	"146.7"	"292.6"	""	"420"	"47"	"33.000"	"26.000"	"0.000470131439099351"	"18"	"0.007443"	"0.09576"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGIGHK"	"[R].nGGIGHk.[C]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"5"	"571.33978"	"1141.67229"	"1141.67298"	"-0.60"	"-0.00034"	"7/62"	"7"	"62"	"942335.442382813"	"HCD"	"MS2"	"9.913642"	"85.7"	"100.000"	"24.0553"	"4850"	"4850"	"4823"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.5"	""	"77.1"	""	"121.8"	""	"149.3"	"6.1"	"175.6"	"171.5"	""	"340"	"5"	"32.000"	"25.000"	"5.668249016975"	"16"	"0.007069"	"0.08943"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"571.34167"	"1141.67607"	"1141.67784"	"-1.55"	"-0.00088"	"11/62"	"11"	"62"	"1723913.64862061"	"HCD"	"MS2"	"26.22052"	"64.4"	"100.000"	"80.6812"	"27798"	"27798"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.3"	""	"85.5"	""	"89.3"	""	"88.1"	""	"116.9"	"131.7"	""	"312"	"28"	"31.000"	"24.000"	"0.0229152499312443"	"24"	"0.0001991"	"0.004552"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"571.34204"	"1141.67681"	"1141.67784"	"-0.91"	"-0.00052"	"10/62"	"10"	"62"	"2540732.49755859"	"HCD"	"MS2"	"23.6484"	"111.9"	"100.000"	"80.0413"	"27511"	"27511"	"27493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.4"	""	"159.6"	""	"150.8"	""	"183.8"	""	"186.8"	"198.1"	""	"310"	"35"	"31.000"	"24.000"	"0.00541167488991808"	""	"9.9E-05"	"0.0005541"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"571.34216"	"1141.67705"	"1141.67784"	"-0.69"	"-0.00039"	"12/62"	"12"	"62"	"1573667.3125"	"HCD"	"MS2"	"36.2079"	"59.5"	"100.000"	"80.6398"	"27754"	"27754"	"27736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.9"	""	"72.0"	""	"81.9"	""	"95.1"	""	"110.0"	"111.4"	""	"310"	"26"	"31.000"	"24.000"	"0.0351829052041992"	"23"	"0.0001991"	"0.005412"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"571.34222"	"1141.67717"	"1141.67784"	"-0.59"	"-0.00033"	"11/62"	"11"	"62"	"2444411.12371826"	"HCD"	"MS2"	"17.89165"	"108.0"	"100.000"	"80.0847"	"27556"	"27556"	"27538"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.2"	""	"160.6"	""	"149.5"	""	"153.3"	""	"195.3"	"198.5"	""	"310"	"29"	"31.000"	"24.000"	"0.0216936034998756"	"19"	"0.0001686"	"0.001569"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"571.34235"	"1141.67742"	"1141.67784"	"-0.37"	"-0.00021"	"12/62"	"12"	"62"	"3058492.44549561"	"HCD"	"MS2"	"7.935962"	"123.4"	"100.000"	"80.3702"	"27671"	"27671"	"27660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.3"	""	"178.0"	""	"178.7"	""	"167.7"	"0.3"	"220.4"	"215.1"	""	"310"	"35"	"31.000"	"24.000"	"0.00441907831463106"	""	"0.0001991"	"0.005973"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEIPEVR"	"[R].gIEIPEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"571.34247"	"1141.67766"	"1141.67784"	"-0.16"	"-0.00009"	"10/62"	"10"	"62"	"2772456.86383057"	"HCD"	"MS2"	"5.938648"	"108.5"	"100.000"	"80.3452"	"27635"	"27635"	"27621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.5"	""	"159.1"	""	"168.1"	""	"154.5"	""	"177.7"	"199.3"	""	"330"	"35"	"32.000"	"25.000"	"0.00561673513006651"	""	"0.0001686"	"0.001456"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGYGEGFR"	"[R].qGYGEGFR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"Q5HZY2"	"GTP-binding protein SAR1b OS=Rattus norvegicus OX=10116 GN=Sar1b PE=2 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"571.79327"	"1142.57927"	"1142.57919"	"0.07"	"0.00004"	"6/70"	"6"	"70"	"2177509.05645752"	"HCD"	"MS2"	"37.6321"	"150.5"	"100.000"	"35.5161"	"9481"	"9481"	"9464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.9"	""	"185.7"	""	"186.0"	""	"296.3"	"0.1"	"292.8"	"265.2"	""	"328"	"7"	"32.000"	"25.000"	"3.49014803541165"	"17"	"0.008135"	"0.1039"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSSSSSFR"	"[R].vGSSSSSFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"571.80310"	"1142.59892"	"1142.60032"	"-1.22"	"-0.00070"	"7/72"	"7"	"72"	"7881252.22186279"	"HCD"	"MS2"	"18.13776"	"361.0"	"100.000"	"29.4211"	"6989"	"6989"	"6962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"386.8"	""	"377.6"	""	"445.7"	""	"841.4"	""	"688.8"	"692.0"	""	"355"	"38"	"32.000"	"25.000"	"0.00253628677635721"	""	"9.9E-05"	"0.0005782"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSSSSSFR"	"[R].vGSSSSSFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"571.80359"	"1142.59990"	"1142.60032"	"-0.36"	"-0.00021"	"8/72"	"8"	"72"	"7009494.34130859"	"HCD"	"MS2"	"12.57056"	"307.3"	"100.000"	"29.2343"	"6953"	"6953"	"6930"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.9"	""	"347.1"	""	"365.4"	""	"702.1"	""	"584.3"	"587.1"	""	"352"	"35"	"32.000"	"25.000"	"0.00518218207548582"	""	"9.9E-05"	"0.0006567"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEDFVR"	"[R].tFEDFVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"571.80426"	"1142.60124"	"1142.60434"	"-2.71"	"-0.00155"	"9/54"	"9"	"54"	"1037228.64813232"	"HCD"	"MS2"	"16.21799"	"58.7"	"100.000"	"83.3170"	"28835"	"28835"	"28821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.5"	""	"63.2"	""	"85.3"	""	"102.2"	""	"101.2"	"116.8"	""	"357"	"18"	"32.000"	"25.000"	"0.26160028961063"	"16"	"0.002525"	"0.02386"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEDFVR"	"[R].tFEDFVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"571.80450"	"1142.60173"	"1142.60434"	"-2.28"	"-0.00130"	"9/54"	"9"	"54"	"1053428.1295166"	"HCD"	"MS2"	"17.56278"	"57.6"	"100.000"	"83.3627"	"28882"	"28882"	"28864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.6"	""	"62.8"	""	"90.4"	""	"88.0"	""	"104.8"	"116.9"	""	"349"	"29"	"32.000"	"25.000"	"0.024535529296067"	"20"	"0.001261"	"0.01008"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSDIFR"	"[K].eFSDIFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"571.80566"	"1142.60405"	"1142.60434"	"-0.25"	"-0.00014"	"4/54"	"4"	"54"	"852799.569213867"	"HCD"	"MS2"	"16.44679"	"48.6"	"100.000"	"97.5483"	"34602"	"34602"	"34584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"53.6"	""	"57.4"	""	"95.6"	""	"97.9"	"105.5"	""	"341"	"24"	"32.000"	"25.000"	"0.0725645294393032"	"17"	"0.00192"	"0.01596"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEDFVR"	"[R].tFEDFVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"571.80566"	"1142.60405"	"1142.60434"	"-0.25"	"-0.00014"	"10/54"	"10"	"54"	"1058676.96740723"	"HCD"	"MS2"	"23.70796"	"55.3"	"100.000"	"83.0130"	"28712"	"28712"	"28690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.2"	""	"71.1"	""	"82.8"	""	"97.1"	"1.1"	"81.9"	"112.0"	""	"341"	"24"	"32.000"	"25.000"	"0.0649717228886383"	"21"	"0.003001"	"0.03225"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEDFVR"	"[R].tFEDFVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"571.80566"	"1142.60405"	"1142.60434"	"-0.25"	"-0.00014"	"7/54"	"7"	"54"	"1101444.0223999"	"HCD"	"MS2"	"28.00873"	"59.7"	"100.000"	"83.0515"	"28756"	"28756"	"28732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.6"	""	"71.5"	""	"82.3"	""	"99.5"	""	"98.3"	"122.5"	""	"341"	"17"	"32.000"	"25.000"	"0.374735108309813"	"17"	"0.002525"	"0.02418"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSDIFR"	"[K].eFSDIFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"571.80573"	"1142.60417"	"1142.60434"	"-0.15"	"-0.00008"	"6/54"	"6"	"54"	"802415.464172363"	"HCD"	"MS2"	"21.31676"	"44.5"	"100.000"	"97.5065"	"34554"	"34554"	"34537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.2"	""	"50.1"	""	"56.5"	""	"86.6"	""	"92.5"	"88.2"	""	"338"	"22"	"32.000"	"25.000"	"0.111914589125598"	"17"	"0.0003938"	"0.006241"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"571.80579"	"1142.60430"	"1142.60434"	"-0.04"	"-0.00002"	"7/64"	"7"	"64"	"1146213.81140137"	"HCD"	"MS2"	"22.87898"	"28.0"	"100.000"	"74.5328"	"25308"	"25308"	"25290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"47.2"	""	"36.7"	""	"42.1"	"0.5"	"54.4"	"47.6"	""	"336"	"44"	"32.000"	"25.000"	"0.000676564617666771"	"24"	"0.0001686"	"0.001078"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQPGAPEAP"	"[R].fQPGAPEAP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"571.80597"	"1142.60466"	"1142.60434"	"0.28"	"0.00016"	"7/64"	"7"	"64"	"1122920.56262207"	"HCD"	"MS2"	"33.30674"	"33.8"	"100.000"	"74.5086"	"25268"	"25268"	"25246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.2"	""	"48.9"	""	"44.0"	""	"51.1"	"1.3"	"65.5"	"52.7"	""	"336"	"34"	"32.000"	"25.000"	"0.0067656461766677"	""	"0.0001991"	"0.004673"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFAVGYR"	"[R].sNFAVGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"571.81079"	"1142.61431"	"1142.61557"	"-1.11"	"-0.00063"	"6/68"	"6"	"68"	"3202248.44299316"	"HCD"	"MS2"	"10.80519"	"171.1"	"100.000"	"47.0733"	"14166"	"14166"	"14145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.9"	""	"259.2"	""	"249.9"	""	"253.8"	""	"301.4"	"334.2"	""	"370"	"23"	"32.000"	"25.000"	"0.0912371537316631"	"15"	"0.0001991"	"0.00589"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFAVGYR"	"[R].sNFAVGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"571.81128"	"1142.61528"	"1142.61557"	"-0.26"	"-0.00015"	"6/68"	"6"	"68"	"2669612.74969482"	"HCD"	"MS2"	"10.38279"	"143.1"	"100.000"	"47.4437"	"14279"	"14279"	"14258"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.9"	""	"217.1"	""	"211.6"	""	"193.4"	""	"246.2"	"297.3"	""	"374"	"17"	"32.000"	"25.000"	"0.353868256686611"	"15"	"0.0004582"	"0.00642"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFAVGYR"	"[R].sNFAVGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.81128"	"1142.61528"	"1142.61557"	"-0.26"	"-0.00015"	"7/68"	"7"	"68"	"2824509.06335449"	"HCD"	"MS2"	"46.13575"	"154.3"	"100.000"	"47.1310"	"14152"	"14152"	"14132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.9"	""	"238.4"	""	"230.3"	""	"225.5"	""	"256.6"	"293.4"	""	"374"	"14"	"32.000"	"25.000"	"0.680521117557877"	"13"	"0.0009352"	"0.008128"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNFAVGYR"	"[R].sNFAVGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"571.81158"	"1142.61589"	"1142.61557"	"0.28"	"0.00016"	"10/68"	"10"	"68"	"2485232.5826416"	"HCD"	"MS2"	"56.92982"	"133.5"	"100.000"	"46.7652"	"14041"	"14041"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.2"	""	"197.0"	""	"197.3"	""	"201.1"	""	"226.7"	"250.5"	""	"374"	"10"	"32.000"	"25.000"	"1.78583613586009"	"13"	"0.0005161"	"0.006837"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEAAVLAR"	"[K].aIEAAVLAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6604"	"0.0000"	"1"	"1"	"1"	"571.85791"	"1142.70854"	"1142.70947"	"-0.81"	"-0.00047"	"7/64"	"7"	"64"	"3590662.88916016"	"HCD"	"MS2"	"1.418488"	"140.6"	"100.000"	"68.3506"	"22768"	"22768"	"22748"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"216.9"	""	"229.3"	""	"232.2"	""	"211.9"	""	"196.4"	"242.8"	""	"289"	"53"	"31.000"	"24.000"	"7.29235574979299E-05"	""	"0"	"0.0001075"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEAAVLAR"	"[K].aIEAAVLAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"571.85828"	"1142.70928"	"1142.70947"	"-0.17"	"-0.00010"	"7/64"	"7"	"64"	"2621748.29528809"	"HCD"	"MS2"	"1.874811"	"106.1"	"100.000"	"68.6535"	"22924"	"22924"	"22906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.8"	""	"165.5"	""	"176.1"	""	"154.4"	""	"167.8"	"188.8"	""	"311"	"49"	"31.000"	"24.000"	"0.000201247453345473"	""	"0"	"3.01E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEAAVLAR"	"[K].aIEAAVLAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"571.85834"	"1142.70940"	"1142.70947"	"-0.07"	"-0.00004"	"7/64"	"7"	"64"	"2140522.75756836"	"HCD"	"MS2"	"0"	"90.1"	"100.000"	"68.6452"	"22888"	"22888"	"22876"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.0"	""	"144.1"	""	"155.1"	""	"130.4"	"0.7"	"142.0"	"147.1"	""	"311"	"51"	"31.000"	"24.000"	"0.000113169759605476"	""	"0"	"7.696E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEAAVLAR"	"[K].aIEAAVLAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"571.85852"	"1142.70976"	"1142.70947"	"0.25"	"0.00015"	"7/64"	"7"	"64"	"2840239.668396"	"HCD"	"MS2"	"1.145504"	"112.6"	"100.000"	"68.3398"	"22796"	"22796"	"22778"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.6"	""	"174.6"	""	"192.3"	""	"167.9"	""	"165.1"	"197.8"	""	"311"	"51"	"31.000"	"24.000"	"0.000115008620271556"	""	"0"	"5.252E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVGVLQR"	"[R].eLVGVLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D5"	"Phospholysine phosphohistidine inorganic pyrophosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Lhpp PE=2 SV=1"	"Q5I0D5"	"Phospholysine phosphohistidine inorganic pyrophosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Lhpp PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"571.85889"	"1142.71050"	"1142.70947"	"0.90"	"0.00051"	"6/58"	"6"	"58"	"439250.735656738"	"HCD"	"MS2"	"45.36568"	"27.9"	"100.000"	"71.3126"	"24003"	"24003"	"23980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.1"	""	"35.9"	""	"37.0"	""	"47.5"	""	"52.1"	"52.4"	""	"311"	"19"	"31.000"	"24.000"	"0.217135280144198"	"19"	"0.001261"	"0.01021"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"572.31329"	"1143.61931"	"1143.62072"	"-1.23"	"-0.00070"	"5/68"	"5"	"68"	"721638.338256836"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"27.6328"	"6268"	"6268"	"6245"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.5"	""	"63.5"	""	"51.4"	""	"102.9"	"0.0"	"124.8"	"111.8"	""	"481"	"37"	"33.000"	"26.000"	"0.00517744007201212"	"20"	"0.0001991"	"0.005449"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"572.31348"	"1143.61968"	"1143.62072"	"-0.91"	"-0.00052"	"5/68"	"5"	"68"	"4538887.112854"	"HCD"	"MS2"	"0"	"231.5"	"100.000"	"27.0677"	"6079"	"6079"	"6070"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.5"	""	"273.3"	""	"208.2"	""	"488.2"	""	"575.5"	"498.7"	""	"481"	"34"	"33.000"	"26.000"	"0.0100026501823812"	"19"	"0.0001991"	"0.00541"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"572.31354"	"1143.61980"	"1143.62072"	"-0.80"	"-0.00046"	"6/68"	"6"	"68"	"4194965.74145508"	"HCD"	"MS2"	"0"	"218.8"	"100.000"	"27.2729"	"6124"	"6124"	"6113"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.5"	""	"240.8"	""	"201.3"	""	"458.8"	"4.5"	"550.0"	"476.2"	""	"481"	"37"	"33.000"	"26.000"	"0.0050363404563214"	"21"	"0.0001991"	"0.004974"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYVTTSTR"	"[R].sYVTTSTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"572.31372"	"1143.62016"	"1143.62072"	"-0.48"	"-0.00028"	"7/68"	"7"	"68"	"1450464.12646484"	"HCD"	"MS2"	"0"	"85.5"	"100.000"	"27.3454"	"6190"	"6190"	"6180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.4"	""	"100.5"	""	"81.4"	""	"174.6"	"0.2"	"209.9"	"178.7"	""	"481"	"36"	"33.000"	"26.000"	"0.00650301986568177"	"17"	"0.0001686"	"0.001936"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQLGAQR"	"[R].lEQLGAQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"572.33728"	"1143.66728"	"1143.66834"	"-0.92"	"-0.00053"	"6/66"	"6"	"66"	"8601582.85070801"	"HCD"	"MS2"	"44.07718"	"451.6"	"100.000"	"44.9939"	"13289"	"13289"	"13274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"692.7"	""	"649.5"	""	"656.4"	""	"685.8"	""	"786.9"	"809.4"	""	"470"	"21"	"33.000"	"26.000"	"0.167906636627745"	""	"0.004314"	"0.05055"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQLGAQR"	"[R].lEQLGAQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"572.33734"	"1143.66741"	"1143.66834"	"-0.81"	"-0.00047"	"7/66"	"7"	"66"	"8873682.65093994"	"HCD"	"MS2"	"51.98818"	"488.1"	"100.000"	"44.7627"	"13229"	"13229"	"13215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"722.9"	""	"698.0"	""	"737.8"	""	"718.1"	""	"862.1"	"886.1"	""	"469"	"18"	"33.000"	"26.000"	"0.384718301815292"	""	"0.003568"	"0.03984"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASINPVTGR"	"[K].aSINPVTGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80ZG1"	"Synembryn-A OS=Rattus norvegicus OX=10116 GN=Ric8a PE=1 SV=2"	"Q80ZG1"	"Synembryn-A OS=Rattus norvegicus OX=10116 GN=Ric8a PE=1 SV=2"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"572.33765"	"1143.66802"	"1143.66834"	"-0.28"	"-0.00016"	"6/84"	"6"	"84"	"1391468.12469482"	"HCD"	"MS2"	"11.44961"	"78.3"	"100.000"	"38.4958"	"10689"	"10689"	"10660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.2"	""	"97.0"	""	"93.1"	""	"152.3"	""	"146.4"	"149.5"	""	"487"	"38"	"33.000"	"26.000"	"0.00370253323489863"	"20"	"9.9E-05"	"0.0008059"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASINPVTGR"	"[K].aSINPVTGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80ZG1"	"Synembryn-A OS=Rattus norvegicus OX=10116 GN=Ric8a PE=1 SV=2"	"Q80ZG1"	"Synembryn-A OS=Rattus norvegicus OX=10116 GN=Ric8a PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"572.33820"	"1143.66911"	"1143.66834"	"0.68"	"0.00039"	"8/84"	"8"	"84"	"1275140.89660645"	"HCD"	"MS2"	"13.008"	"72.3"	"100.000"	"38.5993"	"10695"	"10695"	"10670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.0"	""	"92.7"	""	"94.3"	""	"130.6"	""	"128.4"	"141.1"	""	"484"	"33"	"33.000"	"26.000"	"0.0132377863020341"	"16"	"0"	"0.0003471"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"572.34998"	"1143.69267"	"1143.69349"	"-0.71"	"-0.00041"	"6/58"	"6"	"58"	"572623.238891602"	"HCD"	"MS2"	"16.60301"	"31.0"	"100.000"	"90.5195"	"31767"	"31767"	"31748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"37.9"	""	"41.0"	""	"54.3"	"2.4"	"54.2"	"64.3"	""	"461"	"36"	"33.000"	"26.000"	"0.00637780049267353"	""	"0.0005778"	"0.007186"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"572.34998"	"1143.69267"	"1143.69349"	"-0.71"	"-0.00041"	"6/58"	"6"	"58"	"1416724.23199463"	"HCD"	"MS2"	"45.121"	"58.7"	"100.000"	"89.6721"	"31387"	"31387"	"31378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.5"	""	"77.0"	""	"83.3"	""	"109.9"	"0.7"	"104.1"	"104.4"	""	"461"	"40"	"33.000"	"26.000"	"0.00216108042596415"	""	"0.0001686"	"0.001145"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"572.35022"	"1143.69316"	"1143.69349"	"-0.29"	"-0.00016"	"6/58"	"6"	"58"	"11508369.0215454"	"HCD"	"MS2"	"0.4347533"	"370.1"	"83.950"	"89.9064"	"31521"	"31521"	"31509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"490.1"	""	"500.3"	""	"522.4"	""	"714.5"	""	"609.3"	"671.6"	""	"515"	"46"	"34.000"	"27.000"	"0.000610628729207876"	""	"9.9E-05"	"0.0009564"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"572.35034"	"1143.69341"	"1143.69349"	"-0.07"	"-0.00004"	"6/58"	"6"	"58"	"915627.042724609"	"HCD"	"MS2"	"8.491038"	"42.7"	"100.000"	"90.5159"	"31727"	"31727"	"31716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"47.5"	""	"59.6"	""	"77.4"	"0.7"	"80.8"	"84.8"	""	"515"	"32"	"34.000"	"27.000"	"0.0146817300112293"	""	"9.9E-05"	"0.0007175"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"572.35040"	"1143.69353"	"1143.69349"	"0.03"	"0.00002"	"6/58"	"6"	"58"	"1801915.74066162"	"HCD"	"MS2"	"36.82343"	"71.4"	"100.000"	"89.6089"	"31402"	"31402"	"31387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.2"	""	"94.1"	""	"91.4"	""	"132.4"	""	"122.6"	"129.2"	""	"515"	"43"	"34.000"	"27.000"	"0.00142159940614795"	""	"9.9E-05"	"0.000776"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"572.35040"	"1143.69353"	"1143.69349"	"0.03"	"0.00002"	"6/58"	"6"	"58"	"6579394.03460693"	"HCD"	"MS2"	"0.6580416"	"250.5"	"100.000"	"90.2418"	"31618"	"31618"	"31606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.9"	""	"323.4"	""	"367.1"	""	"453.1"	""	"438.1"	"482.6"	""	"515"	"46"	"34.000"	"27.000"	"0.000614861405350143"	""	"9.9E-05"	"0.0006452"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"572.35040"	"1143.69353"	"1143.69349"	"0.03"	"0.00002"	"6/58"	"6"	"58"	"9587467.76916504"	"HCD"	"MS2"	"0.3448296"	"369.9"	"100.000"	"89.9700"	"31508"	"31508"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"513.5"	""	"482.6"	""	"503.8"	""	"689.0"	""	"638.7"	"677.2"	""	"515"	"46"	"34.000"	"27.000"	"0.000605030451368439"	""	"9.9E-05"	"0.0008029"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALLEEAR"	"[K].iALLEEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"572.35046"	"1143.69365"	"1143.69349"	"0.14"	"0.00008"	"6/58"	"6"	"58"	"5520695.6496582"	"HCD"	"MS2"	"0.2196333"	"216.2"	"100.000"	"90.2013"	"31639"	"31639"	"31625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"297.5"	""	"273.0"	""	"327.3"	""	"372.2"	""	"374.9"	"404.6"	""	"515"	"46"	"34.000"	"27.000"	"0.000610628729207876"	""	"9.9E-05"	"0.00059"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"572.82837"	"1144.64946"	"1144.65235"	"-2.53"	"-0.00145"	"6/72"	"6"	"72"	"10595577.8536377"	"HCD"	"MS2"	"5.754755"	"467.4"	"100.000"	"45.2167"	"13380"	"13380"	"13362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"562.6"	""	"552.7"	""	"550.7"	""	"928.5"	""	"895.9"	"947.5"	""	"575"	"33"	"34.000"	"27.000"	"0.0145424590325895"	"27"	"0.0009352"	"0.008052"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"572.82880"	"1144.65032"	"1144.65235"	"-1.78"	"-0.00102"	"7/72"	"7"	"72"	"13258452.8621826"	"HCD"	"MS2"	"7.64306"	"535.5"	"89.300"	"45.0177"	"13333"	"13333"	"13315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"629.3"	""	"570.9"	""	"627.2"	""	"1078.2"	"2.5"	"1077.1"	"1100.0"	""	"561"	"40"	"34.000"	"27.000"	"0.00273484593379727"	""	"0.0001991"	"0.005344"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"572.82935"	"1144.65141"	"1144.65235"	"-0.82"	"-0.00047"	"6/72"	"6"	"72"	"7021510.36920166"	"HCD"	"MS2"	"3.787157"	"303.1"	"100.000"	"45.5042"	"13497"	"13497"	"13480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"340.3"	""	"321.8"	""	"351.6"	""	"633.2"	""	"607.7"	"625.7"	""	"556"	"36"	"34.000"	"27.000"	"0.00776327187863979"	"25"	"0.0001991"	"0.005217"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDAEIAR"	"[K].lQDAEIAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"572.82971"	"1144.65215"	"1144.65235"	"-0.18"	"-0.00010"	"6/72"	"6"	"72"	"4432297.97241211"	"HCD"	"MS2"	"6.212503"	"199.6"	"100.000"	"45.3143"	"13454"	"13454"	"13436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"226.2"	""	"218.4"	""	"241.6"	""	"398.6"	"0.7"	"413.5"	"396.3"	""	"595"	"34"	"34.000"	"27.000"	"0.0114152905533953"	"22"	"0.0001991"	"0.003228"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGELVFTI"	"[K].hGELVFTI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"572.83179"	"1144.65630"	"1144.65638"	"-0.07"	"-0.00004"	"6/66"	"6"	"66"	"546581.892150879"	"HCD"	"MS2"	"19.22638"	"17.8"	"100.000"	"100.1198"	"35641"	"35641"	"35618"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"14.1"	""	"27.0"	""	"34.5"	""	"37.8"	"36.2"	""	"596"	"24"	"34.000"	"27.000"	"0.117277922485822"	"18"	"0.002084"	"0.01878"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVNGLWGk.[V]"	"K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"572.83618"	"1144.66509"	"1144.66761"	"-2.20"	"-0.00126"	"5/76"	"5"	"76"	"652185.361022949"	"HCD"	"MS2"	"20.89696"	"36.1"	"100.000"	"64.3377"	"21173"	"21173"	"21153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"40.0"	""	"46.5"	""	"71.2"	""	"76.3"	"62.3"	""	"563"	"30"	"34.000"	"27.000"	"0.0262711085674353"	"24"	"0.002189"	"0.02143"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVNGLWGk.[V]"	"K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"572.83679"	"1144.66631"	"1144.66761"	"-1.14"	"-0.00065"	"6/76"	"6"	"76"	"3705670.5458374"	"HCD"	"MS2"	"40.617"	"136.3"	"100.000"	"64.0043"	"21006"	"21006"	"20988"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.4"	""	"202.4"	""	"181.5"	""	"236.6"	"1.7"	"272.7"	"216.4"	""	"702"	"29"	"35.000"	"28.000"	"0.0415247586059533"	"21"	"0.0005161"	"0.006541"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVNGLWGk.[V]"	"K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"572.83691"	"1144.66655"	"1144.66761"	"-0.92"	"-0.00053"	"6/76"	"6"	"76"	"3632704.26507568"	"HCD"	"MS2"	"34.98227"	"137.3"	"100.000"	"63.9709"	"21025"	"21025"	"21009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.1"	""	"212.4"	""	"178.7"	""	"220.6"	""	"278.8"	"230.8"	""	"702"	"31"	"35.000"	"28.000"	"0.0309961045046916"	"23"	"0.0005161"	"0.00671"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVNGLWGk.[V]"	"K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"572.83698"	"1144.66667"	"1144.66761"	"-0.82"	"-0.00047"	"5/76"	"5"	"76"	"905371.637695313"	"HCD"	"MS2"	"24.34328"	"47.6"	"100.000"	"64.2643"	"21143"	"21143"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.4"	""	"53.8"	""	"67.7"	""	"88.8"	""	"97.4"	"90.9"	""	"702"	"31"	"35.000"	"28.000"	"0.0284647331306698"	"25"	"0.001872"	"0.01564"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVNGLWGk.[V]"	"K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"572.83716"	"1144.66704"	"1144.66761"	"-0.50"	"-0.00028"	"5/76"	"5"	"76"	"837668.84375"	"HCD"	"MS2"	"19.93456"	"43.6"	"100.000"	"64.3207"	"21133"	"21133"	"21114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"54.6"	""	"55.2"	""	"87.6"	""	"86.1"	"80.3"	""	"702"	"31"	"35.000"	"28.000"	"0.028009613523106"	"22"	"0.002462"	"0.02306"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIQDVLR"	"[K].aTIQDVLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"572.84753"	"1144.68779"	"1144.68874"	"-0.83"	"-0.00047"	"6/70"	"6"	"70"	"1292907.7578125"	"HCD"	"MS2"	"16.78313"	"60.8"	"100.000"	"72.8146"	"24579"	"24579"	"24554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.9"	""	"66.4"	""	"71.1"	""	"102.3"	"0.2"	"112.7"	"125.6"	""	"634"	"26"	"35.000"	"28.000"	"0.0787153194378696"	"20"	"0.0001991"	"0.002081"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSAEVAR"	"[K].gLLSAEVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"572.84753"	"1144.68779"	"1144.68874"	"-0.83"	"-0.00047"	"13/68"	"13"	"68"	"3889796.7532959"	"HCD"	"MS2"	"0"	"170.2"	"100.000"	"58.1648"	"18670"	"18670"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.5"	""	"262.5"	""	"265.4"	""	"220.1"	"1.7"	"296.1"	"330.8"	""	"634"	"40"	"35.000"	"28.000"	"0.00348384851100109"	"28"	"0"	"0.0001435"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIQDVLR"	"[K].aTIQDVLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"572.84753"	"1144.68779"	"1144.68874"	"-0.83"	"-0.00047"	"6/70"	"6"	"70"	"3384956.39593506"	"HCD"	"MS2"	"1.451978"	"139.9"	"100.000"	"73.1850"	"24760"	"24760"	"24744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.0"	""	"163.1"	""	"179.1"	""	"255.9"	"0.9"	"285.6"	"265.1"	""	"634"	"27"	"35.000"	"28.000"	"0.0674620077576521"	"21"	"0.0001991"	"0.003791"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSAEVAR"	"[K].gLLSAEVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"572.84766"	"1144.68804"	"1144.68874"	"-0.61"	"-0.00035"	"7/68"	"7"	"68"	"4952507.22045898"	"HCD"	"MS2"	"0.8581314"	"213.4"	"100.000"	"57.8543"	"18543"	"18543"	"18530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.1"	""	"300.3"	""	"306.2"	""	"316.9"	"1.3"	"377.0"	"435.3"	""	"633"	"31"	"35.000"	"28.000"	"0.0233009546357084"	""	"0"	"0.0003179"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSAEVAR"	"[K].gLLSAEVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"572.84766"	"1144.68804"	"1144.68874"	"-0.61"	"-0.00035"	"7/68"	"7"	"68"	"5436185.17022705"	"HCD"	"MS2"	"0"	"238.9"	"100.000"	"58.1512"	"18628"	"18628"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"307.9"	""	"345.9"	""	"345.3"	""	"347.5"	""	"438.4"	"481.1"	""	"633"	"33"	"35.000"	"28.000"	"0.0148721485373551"	""	"0"	"0.000276"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIQDVLR"	"[K].aTIQDVLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"572.84778"	"1144.68828"	"1144.68874"	"-0.40"	"-0.00023"	"6/70"	"6"	"70"	"1155986.42547607"	"HCD"	"MS2"	"14.79125"	"54.7"	"100.000"	"72.8897"	"24639"	"24639"	"24616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.9"	""	"67.9"	""	"69.0"	""	"87.9"	""	"106.8"	"115.2"	""	"635"	"27"	"35.000"	"28.000"	"0.0707528159893321"	"19"	"0.0001991"	"0.005693"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLLSAEVAR"	"[K].gLLSAEVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"572.84784"	"1144.68840"	"1144.68874"	"-0.29"	"-0.00017"	"11/68"	"11"	"68"	"3370032.25744629"	"HCD"	"MS2"	"0"	"149.5"	"100.000"	"58.4504"	"18751"	"18751"	"18734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.3"	""	"235.0"	""	"236.0"	""	"206.2"	"2.7"	"244.7"	"285.4"	""	"681"	"43"	"35.000"	"28.000"	"0.00166003450880203"	""	"0"	"0.0003113"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIQDVLR"	"[K].aTIQDVLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"572.84821"	"1144.68913"	"1144.68874"	"0.35"	"0.00020"	"6/70"	"6"	"70"	"3558445.581604"	"HCD"	"MS2"	"2.554531"	"146.4"	"100.000"	"73.1077"	"24699"	"24699"	"24682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.7"	""	"166.1"	""	"163.6"	""	"282.9"	"1.2"	"287.3"	"283.5"	""	"678"	"26"	"35.000"	"28.000"	"0.0920872912136449"	"23"	"0.0003938"	"0.006218"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLAENISR"	"[R].nLAENISR.[V]"	"N-Term(TMT6plex)"	"3"	"3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5;Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5;Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P09811; P09812; P53534"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5; Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5; Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"573.32672"	"1145.64617"	"1145.64760"	"-1.25"	"-0.00072"	"6/76"	"6"	"76"	"1927549.1741333"	"HCD"	"MS2"	"0"	"143.2"	"100.000"	"39.2487"	"10994"	"10994"	"10980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.8"	""	"157.9"	""	"174.7"	""	"258.8"	"2.8"	"257.3"	"300.7"	""	"744"	"35"	"35.000"	"28.000"	"0.0106302368213548"	""	"0.0001991"	"0.00536"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"573.32867"	"1145.65007"	"1145.65163"	"-1.36"	"-0.00078"	"5/76"	"5"	"76"	"481847.553405762"	"HCD"	"MS2"	"8.885654"	"25.5"	"100.000"	"78.1973"	"26787"	"26787"	"26765"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"28.3"	""	"32.4"	""	"48.4"	""	"57.3"	"50.5"	""	"908"	"29"	"36.000"	"29.000"	"0.0518866763994556"	""	"0.0065"	"0.08095"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"573.32867"	"1145.65007"	"1145.65163"	"-1.36"	"-0.00078"	"5/76"	"5"	"76"	"721626.159667969"	"HCD"	"MS2"	"65.13139"	"34.6"	"100.000"	"82.5354"	"28519"	"28519"	"28492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.5"	""	"44.8"	""	"48.7"	""	"61.1"	""	"66.0"	"65.8"	""	"908"	"14"	"36.000"	"29.000"	"1.61456618630319"	"20"	"0.007412"	"0.09387"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"573.32867"	"1145.65007"	"1145.65163"	"-1.36"	"-0.00078"	"5/76"	"5"	"76"	"570338.250854492"	"HCD"	"MS2"	"50.80159"	"29.7"	"100.000"	"77.7965"	"26625"	"26625"	"26596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.1"	""	"31.4"	""	"43.3"	""	"50.5"	""	"63.5"	"61.6"	""	"908"	"31"	"36.000"	"29.000"	"0.034758085953771"	"28"	"0.002035"	"0.01838"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"573.32886"	"1145.65044"	"1145.65163"	"-1.04"	"-0.00059"	"6/76"	"6"	"76"	"554378.771118164"	"HCD"	"MS2"	"12.80588"	"27.9"	"100.000"	"70.9004"	"23804"	"23804"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"37.1"	""	"36.8"	""	"49.1"	"1.3"	"57.7"	"52.6"	""	"871"	"33"	"36.000"	"29.000"	"0.02354985076428"	"29"	"0.002166"	"0.01982"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"573.32886"	"1145.65044"	"1145.65163"	"-1.04"	"-0.00059"	"4/76"	"4"	"76"	"856578.187255859"	"HCD"	"MS2"	"63.79151"	"40.7"	"100.000"	"79.4051"	"27252"	"27252"	"27233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"44.3"	""	"56.6"	""	"64.7"	""	"80.5"	"82.1"	""	"871"	"17"	"36.000"	"29.000"	"0.924672963201095"	"20"	"0.007379"	"0.09307"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"573.32892"	"1145.65056"	"1145.65163"	"-0.93"	"-0.00053"	"5/76"	"5"	"76"	"516939.366577148"	"HCD"	"MS2"	"19.20398"	"27.1"	"100.000"	"70.8031"	"23797"	"23797"	"23782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.2"	""	"31.1"	""	"30.5"	""	"52.7"	""	"56.9"	"54.7"	""	"871"	"33"	"36.000"	"29.000"	"0.0244899647120397"	""	"0.00394"	"0.04346"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"573.32898"	"1145.65068"	"1145.65163"	"-0.82"	"-0.00047"	"7/76"	"7"	"76"	"568223.99395752"	"HCD"	"MS2"	"58.37856"	"28.0"	"100.000"	"77.6676"	"26545"	"26545"	"26528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.4"	""	"33.7"	""	"36.8"	""	"47.5"	""	"57.0"	"58.9"	""	"871"	"43"	"36.000"	"29.000"	"0.00230668429814817"	""	"0.002559"	"0.02543"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"573.32898"	"1145.65068"	"1145.65163"	"-0.82"	"-0.00047"	"6/76"	"6"	"76"	"683085.995849609"	"HCD"	"MS2"	"28.91381"	"36.2"	"100.000"	"71.9087"	"24246"	"24246"	"24218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"38.6"	""	"51.0"	""	"65.4"	""	"75.5"	"74.7"	""	"871"	"17"	"36.000"	"29.000"	"0.783408283538587"	"24"	"0.00807"	"0.1023"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"573.32898"	"1145.65068"	"1145.65163"	"-0.82"	"-0.00047"	"8/76"	"8"	"76"	"3259231.14770508"	"HCD"	"MS2"	"33.3743"	"112.7"	"100.000"	"66.0334"	"21864"	"21864"	"21846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.8"	""	"116.8"	""	"141.4"	""	"232.7"	""	"243.7"	"213.3"	""	"871"	"42"	"36.000"	"29.000"	"0.00271011774191169"	"27"	"0"	"0.0001277"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"573.32904"	"1145.65080"	"1145.65163"	"-0.72"	"-0.00041"	"5/76"	"5"	"76"	"468468.53338623"	"HCD"	"MS2"	"27.55601"	"26.1"	"100.000"	"78.0936"	"26718"	"26718"	"26698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"29.8"	""	"38.5"	""	"45.3"	""	"51.4"	"60.3"	""	"871"	"36"	"36.000"	"29.000"	"0.0119670790367609"	""	"0.00212"	"0.01906"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"573.32904"	"1145.65080"	"1145.65163"	"-0.72"	"-0.00041"	"5/76"	"5"	"76"	"1393724.68878174"	"HCD"	"MS2"	"23.18178"	"61.9"	"100.000"	"75.2428"	"25596"	"25596"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"64.6"	""	"78.6"	""	"116.9"	""	"136.8"	"119.7"	""	"871"	"32"	"36.000"	"29.000"	"0.0284438355677974"	""	"0.002328"	"0.02228"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"573.32904"	"1145.65080"	"1145.65163"	"-0.72"	"-0.00041"	"5/76"	"5"	"76"	"4071686.9564209"	"HCD"	"MS2"	"7.569289"	"148.6"	"100.000"	"74.5849"	"25299"	"25299"	"25286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.5"	""	"192.3"	""	"196.3"	""	"261.9"	""	"306.6"	"273.4"	""	"871"	"33"	"36.000"	"29.000"	"0.0229080519513153"	""	"0.0001991"	"0.004184"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"573.32910"	"1145.65093"	"1145.65163"	"-0.61"	"-0.00035"	"6/76"	"6"	"76"	"439368.617431641"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"78.5082"	"26914"	"26914"	"26887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"30.5"	""	"31.9"	""	"43.9"	"1.2"	"57.3"	"52.0"	""	"871"	"34"	"36.000"	"29.000"	"0.0158120492852379"	""	"0.0004582"	"0.006405"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"573.32910"	"1145.65093"	"1145.65163"	"-0.61"	"-0.00035"	"5/76"	"5"	"76"	"706362.889343262"	"HCD"	"MS2"	"32.83082"	"36.3"	"100.000"	"71.1998"	"23957"	"23957"	"23932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.7"	""	"43.3"	""	"41.6"	""	"65.2"	"1.2"	"77.7"	"68.7"	""	"871"	"31"	"36.000"	"29.000"	"0.0355621622726667"	"26"	"0.004213"	"0.04604"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"573.32910"	"1145.65093"	"1145.65163"	"-0.61"	"-0.00035"	"4/76"	"4"	"76"	"771684.266967773"	"HCD"	"MS2"	"58.33195"	"39.2"	"100.000"	"79.5224"	"27327"	"27327"	"27305"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.7"	""	"43.8"	""	"58.9"	""	"65.2"	""	"88.3"	"68.3"	""	"871"	"17"	"36.000"	"29.000"	"0.881024852314387"	"21"	"0.006384"	"0.07976"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"573.32910"	"1145.65093"	"1145.65163"	"-0.61"	"-0.00035"	"8/76"	"8"	"76"	"1193677.69842529"	"HCD"	"MS2"	"8.952583"	"39.5"	"100.000"	"73.7232"	"24949"	"24949"	"24932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"44.0"	""	"54.3"	""	"73.3"	""	"72.8"	"83.1"	""	"871"	"32"	"36.000"	"29.000"	"0.0267293353249268"	"24"	"9.9E-05"	"0.0006036"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"573.32910"	"1145.65093"	"1145.65163"	"-0.61"	"-0.00035"	"6/76"	"6"	"76"	"9385096.91662598"	"HCD"	"MS2"	"35.82523"	"392.5"	"100.000"	"67.5096"	"22428"	"22428"	"22418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"384.8"	""	"326.1"	""	"399.9"	""	"725.2"	""	"1035.1"	"874.3"	""	"871"	"32"	"36.000"	"29.000"	"0.0257625091683419"	"29"	"0.001348"	"0.0109"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"573.32922"	"1145.65117"	"1145.65163"	"-0.40"	"-0.00023"	"7/76"	"7"	"76"	"3400043.92486572"	"HCD"	"MS2"	"1.756012"	"113.3"	"100.000"	"68.1072"	"22701"	"22701"	"22684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.3"	""	"118.2"	""	"141.2"	""	"204.4"	"0.8"	"238.9"	"245.7"	""	"870"	"50"	"36.000"	"29.000"	"0.000476968015322285"	""	"0.001103"	"0.008954"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"573.32928"	"1145.65129"	"1145.65163"	"-0.29"	"-0.00017"	"7/76"	"7"	"76"	"785030.671875"	"HCD"	"MS2"	"5.722158"	"37.3"	"100.000"	"69.1859"	"23141"	"23141"	"23120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"43.7"	""	"39.1"	""	"74.0"	"0.1"	"76.0"	"78.2"	""	"875"	"49"	"36.000"	"29.000"	"0.000557157597944789"	""	"0.001316"	"0.01038"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"573.32928"	"1145.65129"	"1145.65163"	"-0.29"	"-0.00017"	"6/76"	"6"	"76"	"12832499.451355"	"HCD"	"MS2"	"1.11674"	"239.9"	"62.264"	"67.8080"	"22580"	"22580"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.0"	""	"267.2"	""	"275.3"	""	"447.8"	"2.2"	"581.0"	"467.5"	""	"875"	"48"	"36.000"	"29.000"	"0.000645621608308203"	""	"0.0001991"	"0.004756"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"6/76"	"6"	"76"	"466167.952697754"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"78.4091"	"26847"	"26847"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"32.3"	""	"24.7"	""	"44.8"	"0.3"	"59.4"	"51.6"	""	"875"	"33"	"36.000"	"29.000"	"0.0220789317684044"	""	"0.003317"	"0.03706"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"7/76"	"7"	"76"	"2616636.27844238"	"HCD"	"MS2"	"13.18221"	"89.6"	"100.000"	"73.9845"	"25085"	"25085"	"25065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.4"	""	"109.5"	""	"104.8"	""	"175.6"	"0.7"	"185.3"	"177.9"	""	"875"	"31"	"36.000"	"29.000"	"0.0366419060930511"	"29"	"0.000264"	"0.006071"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"7/76"	"7"	"76"	"3454536.70721436"	"HCD"	"MS2"	"39.50312"	"113.7"	"100.000"	"66.0095"	"21821"	"21821"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.9"	""	"130.8"	""	"144.0"	""	"217.9"	""	"243.3"	"227.8"	""	"875"	"40"	"36.000"	"29.000"	"0.00404555451097972"	"21"	"0"	"0.0003401"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"5/76"	"5"	"76"	"4328149.9777832"	"HCD"	"MS2"	"8.558509"	"144.8"	"100.000"	"74.5605"	"25320"	"25320"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.7"	""	"171.2"	""	"193.0"	""	"264.3"	""	"314.4"	"255.7"	""	"875"	"36"	"36.000"	"29.000"	"0.0112714050618863"	""	"0.002189"	"0.0214"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6458"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"6/76"	"6"	"76"	"6290297.28930664"	"HCD"	"MS2"	"0.4783694"	"194.8"	"100.000"	"74.3082"	"25188"	"25188"	"25171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"216.6"	""	"233.5"	""	"260.0"	""	"345.6"	"0.7"	"419.3"	"374.7"	""	"875"	"48"	"36.000"	"29.000"	"0.000714460227203772"	""	"0.0001991"	"0.002893"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"573.32935"	"1145.65141"	"1145.65163"	"-0.18"	"-0.00011"	"7/76"	"7"	"76"	"13039438.8064575"	"HCD"	"MS2"	"1.524708"	"285.5"	"72.714"	"67.7792"	"22537"	"22537"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"299.0"	""	"285.7"	""	"354.8"	""	"521.9"	"0.3"	"666.6"	"587.3"	""	"875"	"46"	"36.000"	"29.000"	"0.00118026100169465"	""	"0.0001991"	"0.002456"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"5/76"	"5"	"76"	"776759.462097168"	"HCD"	"MS2"	"18.6779"	"39.1"	"100.000"	"71.1977"	"23925"	"23925"	"23902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.3"	""	"40.9"	""	"53.9"	""	"72.9"	""	"80.0"	"77.7"	""	"873"	"28"	"36.000"	"29.000"	"0.0648610907858278"	"26"	"0.003529"	"0.0387"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"7/76"	"7"	"76"	"1296193.27374268"	"HCD"	"MS2"	"8.004878"	"40.1"	"100.000"	"73.6895"	"24965"	"24965"	"24944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"44.0"	""	"53.0"	""	"74.7"	"0.6"	"79.8"	"73.3"	""	"873"	"43"	"36.000"	"29.000"	"0.00200901994368262"	"23"	"0"	"0.0002614"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"6/76"	"6"	"76"	"1215824.16064453"	"HCD"	"MS2"	"43.45989"	"51.0"	"100.000"	"73.4327"	"24831"	"24831"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.5"	""	"61.0"	""	"66.7"	""	"92.1"	"1.7"	"101.5"	"92.9"	""	"873"	"26"	"36.000"	"29.000"	"0.117215285052994"	"19"	"0.0001686"	"0.001696"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"5/76"	"5"	"76"	"2489601.2789917"	"HCD"	"MS2"	"19.15671"	"93.7"	"100.000"	"74.8846"	"25420"	"25420"	"25403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.1"	""	"105.7"	""	"131.0"	""	"169.6"	"1.4"	"196.8"	"178.5"	""	"873"	"36"	"36.000"	"29.000"	"0.0116676729738154"	""	"0.001316"	"0.01042"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"7/76"	"7"	"76"	"3511364.59490967"	"HCD"	"MS2"	"4.764454"	"115.4"	"100.000"	"68.0831"	"22660"	"22660"	"22643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.9"	""	"125.9"	""	"147.9"	""	"196.5"	""	"252.2"	"245.6"	""	"873"	"44"	"36.000"	"29.000"	"0.00158483570907149"	""	"0.002419"	"0.02292"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"573.32941"	"1145.65154"	"1145.65163"	"-0.08"	"-0.00004"	"6/76"	"6"	"76"	"8073615.57855225"	"HCD"	"MS2"	"35.58899"	"308.7"	"100.000"	"67.5061"	"22458"	"22458"	"22448"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.0"	""	"280.3"	""	"329.3"	""	"539.5"	""	"814.4"	"700.4"	""	"873"	"33"	"36.000"	"29.000"	"0.0242652208298531"	"29"	"0.00329"	"0.03556"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"573.32947"	"1145.65166"	"1145.65163"	"0.03"	"0.00002"	"6/76"	"6"	"76"	"6938272.39178467"	"HCD"	"MS2"	"2.312155"	"221.1"	"100.000"	"74.2702"	"25202"	"25202"	"25185"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"255.0"	""	"248.1"	""	"282.5"	""	"398.3"	""	"465.4"	"452.8"	""	"873"	"45"	"36.000"	"29.000"	"0.00141248631249783"	""	"9.9E-05"	"0.0006656"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"573.32953"	"1145.65178"	"1145.65163"	"0.14"	"0.00008"	"6/76"	"6"	"76"	"955491.391784668"	"HCD"	"MS2"	"0"	"52.9"	"100.000"	"69.3867"	"23189"	"23189"	"23168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.8"	""	"66.9"	""	"64.4"	""	"84.9"	"3.8"	"106.2"	"101.7"	""	"873"	"34"	"36.000"	"29.000"	"0.019185991513861"	"28"	"0.002328"	"0.02204"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"573.32953"	"1145.65178"	"1145.65163"	"0.14"	"0.00008"	"6/76"	"6"	"76"	"823349.738525391"	"HCD"	"MS2"	"23.13125"	"51.1"	"100.000"	"72.1594"	"24313"	"24313"	"24288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.5"	""	"51.9"	""	"60.8"	""	"84.0"	"2.4"	"119.7"	"112.3"	""	"873"	"19"	"36.000"	"29.000"	"0.574095639251912"	"23"	"0.00511"	"0.06575"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"573.32953"	"1145.65178"	"1145.65163"	"0.14"	"0.00008"	"6/76"	"6"	"76"	"1120728.9519043"	"HCD"	"MS2"	"0"	"53.2"	"100.000"	"68.8562"	"23007"	"23007"	"22985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.0"	""	"59.6"	""	"68.0"	""	"89.4"	"2.2"	"115.6"	"110.5"	""	"873"	"35"	"36.000"	"29.000"	"0.0130311951315769"	"29"	"0.003043"	"0.03274"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"573.32953"	"1145.65178"	"1145.65163"	"0.14"	"0.00008"	"6/76"	"6"	"76"	"1231336.80560303"	"HCD"	"MS2"	"2.067407"	"56.0"	"100.000"	"68.7881"	"22945"	"22945"	"22930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.9"	""	"68.9"	""	"67.1"	""	"100.8"	"2.0"	"125.0"	"111.4"	""	"873"	"35"	"36.000"	"29.000"	"0.0125598440803212"	""	"0.001261"	"0.01022"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"573.32959"	"1145.65190"	"1145.65163"	"0.24"	"0.00014"	"7/76"	"7"	"76"	"889167.782775879"	"HCD"	"MS2"	"3.29844"	"41.9"	"100.000"	"69.0806"	"23064"	"23064"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.9"	""	"45.7"	""	"51.9"	""	"78.8"	""	"85.1"	"92.2"	""	"873"	"49"	"36.000"	"29.000"	"0.000570143592669548"	""	"0.0001991"	"0.004138"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"573.32959"	"1145.65190"	"1145.65163"	"0.24"	"0.00014"	"4/76"	"4"	"76"	"1858239.32659912"	"HCD"	"MS2"	"46.14688"	"127.3"	"100.000"	"69.7250"	"23360"	"23360"	"23340"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.8"	""	"163.7"	""	"161.1"	""	"202.5"	"40.4"	"201.1"	"263.6"	""	"873"	"19"	"36.000"	"29.000"	"0.548257079152813"	"21"	"0.009348"	"0.1216"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"573.32959"	"1145.65190"	"1145.65163"	"0.24"	"0.00014"	"6/76"	"6"	"76"	"5006709.01867676"	"HCD"	"MS2"	"5.530079"	"164.2"	"100.000"	"74.0132"	"25067"	"25067"	"25052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.3"	""	"202.8"	""	"209.5"	""	"305.0"	""	"337.7"	"329.1"	""	"873"	"48"	"36.000"	"29.000"	"0.000719422883900884"	""	"0.0001991"	"0.002314"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"573.32977"	"1145.65227"	"1145.65163"	"0.56"	"0.00032"	"5/76"	"5"	"76"	"3555108.24176025"	"HCD"	"MS2"	"17.33388"	"131.5"	"100.000"	"74.8716"	"25445"	"25445"	"25430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.3"	""	"156.2"	""	"172.7"	""	"223.5"	""	"276.4"	"259.4"	""	"874"	"35"	"36.000"	"29.000"	"0.0124589498289921"	""	"0.0001991"	"0.005883"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"573.33008"	"1145.65288"	"1145.65163"	"1.09"	"0.00063"	"7/76"	"7"	"76"	"1545567.80303955"	"HCD"	"MS2"	"48.14138"	"67.9"	"100.000"	"65.7098"	"21699"	"21699"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	""	"85.9"	""	"88.2"	""	"116.0"	"0.0"	"150.3"	"125.8"	""	"869"	"35"	"36.000"	"29.000"	"0.0139312402149763"	""	"0.0001686"	"0.001379"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].AAVnGLWGk.[V]"	"N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"573.33038"	"1145.65349"	"1145.65163"	"1.63"	"0.00093"	"5/76"	"5"	"76"	"609834.632385254"	"HCD"	"MS2"	"50.26567"	"36.9"	"100.000"	"72.7052"	"24564"	"24564"	"24536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"36.7"	""	"44.5"	""	"58.7"	"2.5"	"88.9"	"83.8"	""	"868"	"30"	"36.000"	"29.000"	"0.0426078607270674"	""	"0.003317"	"0.03629"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVNGLWGK"	"[K].aAVnGLWGK.[V]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"573.33057"	"1145.65386"	"1145.65163"	"1.95"	"0.00112"	"7/76"	"7"	"76"	"1636698.63641357"	"HCD"	"MS2"	"43.58298"	"72.1"	"100.000"	"65.7133"	"21734"	"21734"	"21710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"84.5"	""	"95.1"	""	"123.0"	""	"160.3"	"141.5"	""	"878"	"37"	"36.000"	"29.000"	"0.00846183436890821"	"25"	"0.0001686"	"0.001402"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGNK"	"[R].sAPGGGNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"573.33685"	"1145.66643"	"1145.66789"	"-1.28"	"-0.00073"	"7/58"	"7"	"58"	"1487866.04284668"	"HCD"	"MS2"	"5.046266"	"100.6"	"100.000"	"21.7082"	"3958"	"3958"	"3939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.8"	""	"116.8"	""	"118.2"	""	"216.3"	"2.0"	"191.4"	"185.6"	""	"903"	"24"	"36.000"	"29.000"	"0.18865041054095"	""	"0.0001991"	"0.004687"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGNK"	"[R].sAPGGGNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"573.33716"	"1145.66704"	"1145.66789"	"-0.74"	"-0.00043"	"7/58"	"7"	"58"	"846345.465515137"	"HCD"	"MS2"	"0"	"68.4"	"100.000"	"21.8120"	"4035"	"4035"	"4028"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.0"	""	"91.8"	""	"88.7"	""	"138.8"	"1.0"	"134.0"	"120.5"	""	"900"	"24"	"36.000"	"29.000"	"0.185017374497035"	"26"	"0.0001991"	"0.002777"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPGGGNK"	"[R].sAPGGGNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"P13084"	"Nucleophosmin OS=Rattus norvegicus OX=10116 GN=Npm1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"573.33728"	"1145.66728"	"1145.66789"	"-0.53"	"-0.00030"	"7/58"	"7"	"58"	"595299.183166504"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"21.9689"	"4055"	"4055"	"4049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"60.4"	""	"66.7"	""	"93.0"	"1.0"	"95.7"	"99.4"	""	"903"	"28"	"36.000"	"29.000"	"0.079553218495485"	"16"	"0.002035"	"0.01827"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"573.33960"	"1145.67192"	"1145.67275"	"-0.73"	"-0.00042"	"12/62"	"12"	"62"	"34329947.9938965"	"HCD"	"MS2"	"0.2263346"	"285.0"	"23.446"	"60.4305"	"19557"	"19557"	"19540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"440.6"	""	"417.2"	""	"401.9"	""	"468.9"	""	"482.1"	"488.0"	""	"818"	"47"	"36.000"	"29.000"	"0.000886590978871255"	"29"	"0.0001686"	"0.001363"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEEAVR"	"[K].lTVEEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"573.33960"	"1145.67192"	"1145.67275"	"-0.73"	"-0.00042"	"6/62"	"6"	"62"	"3376814.22546387"	"HCD"	"MS2"	"46.06191"	"154.8"	"100.000"	"54.3121"	"17073"	"17073"	"17053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.1"	""	"232.3"	""	"249.7"	""	"221.0"	"10.3"	"252.9"	"287.7"	""	"818"	"21"	"36.000"	"29.000"	"0.351336530295707"	"18"	"0.0003938"	"0.006324"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"573.33966"	"1145.67204"	"1145.67275"	"-0.62"	"-0.00035"	"12/62"	"12"	"62"	"3164734.25769043"	"HCD"	"MS2"	"10.47627"	"145.7"	"100.000"	"59.9581"	"19398"	"19398"	"19382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.9"	""	"209.6"	""	"205.3"	""	"239.7"	"1.6"	"247.7"	"249.3"	""	"818"	"33"	"36.000"	"29.000"	"0.0187380031666244"	"28"	"0.0001991"	"0.002609"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"573.33972"	"1145.67217"	"1145.67275"	"-0.51"	"-0.00029"	"11/62"	"11"	"62"	"16571769.0706787"	"HCD"	"MS2"	"0"	"362.8"	"56.255"	"60.5659"	"19645"	"19645"	"19628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"572.5"	""	"505.3"	""	"522.2"	""	"580.4"	""	"622.4"	"631.8"	""	"818"	"43"	"36.000"	"29.000"	"0.00189549790172142"	"29"	"0.0001686"	"0.001424"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"573.33984"	"1145.67241"	"1145.67275"	"-0.30"	"-0.00017"	"5/62"	"5"	"62"	"1647668.12988281"	"HCD"	"MS2"	"13.65439"	"79.0"	"100.000"	"61.0379"	"19804"	"19804"	"19786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.3"	""	"102.9"	""	"112.7"	""	"132.9"	""	"138.7"	"145.3"	""	"899"	"39"	"36.000"	"29.000"	"0.00535463282608305"	""	"0.0001686"	"0.001394"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"573.33984"	"1145.67241"	"1145.67275"	"-0.30"	"-0.00017"	"10/62"	"10"	"62"	"2574623.63635254"	"HCD"	"MS2"	"7.154845"	"117.5"	"100.000"	"60.8582"	"19763"	"19763"	"19744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.1"	""	"156.1"	""	"159.6"	""	"195.3"	"0.6"	"202.8"	"203.6"	""	"899"	"39"	"36.000"	"29.000"	"0.00540417863360527"	""	"0.0001686"	"0.001473"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"573.33997"	"1145.67266"	"1145.67275"	"-0.09"	"-0.00005"	"5/62"	"5"	"62"	"4107586.59204102"	"HCD"	"MS2"	"7.748003"	"172.0"	"100.000"	"60.1333"	"19436"	"19436"	"19422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"243.8"	""	"234.2"	""	"247.1"	""	"310.2"	"2.1"	"297.3"	"293.2"	""	"898"	"39"	"36.000"	"29.000"	"0.00539816731143218"	""	"0.0001686"	"0.001256"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"573.34021"	"1145.67314"	"1145.67275"	"0.34"	"0.00019"	"11/62"	"11"	"62"	"11795616.7312012"	"HCD"	"MS2"	"0.1673249"	"333.9"	"76.120"	"60.7364"	"19681"	"19681"	"19663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"513.5"	""	"462.1"	""	"491.3"	""	"555.9"	""	"547.7"	"590.0"	""	"892"	"43"	"36.000"	"29.000"	"0.00205747638253929"	"29"	"0.0001686"	"0.001099"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLTLDER"	"[K].aVLTLDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"573.34033"	"1145.67339"	"1145.67275"	"0.55"	"0.00032"	"11/62"	"11"	"62"	"23859550.5863647"	"HCD"	"MS2"	"0.2009026"	"586.6"	"67.349"	"60.2714"	"19526"	"19526"	"19509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"933.8"	""	"844.1"	""	"847.4"	""	"991.9"	""	"954.3"	"980.4"	""	"892"	"43"	"36.000"	"29.000"	"0.00204802313725243"	"29"	"0.0001991"	"0.003139"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGTLAVSR"	"[R].vNGTLAVSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"573.34521"	"1145.68315"	"1145.68399"	"-0.73"	"-0.00042"	"6/86"	"6"	"86"	"1686338.74621582"	"HCD"	"MS2"	"37.49045"	"100.0"	"100.000"	"40.9133"	"11668"	"11668"	"11640"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.5"	""	"154.4"	""	"140.7"	""	"147.3"	"1.2"	"177.5"	"178.3"	""	"776"	"28"	"35.000"	"28.000"	"0.0553135746317649"	"20"	"0"	"0.0003777"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGTLAVSR"	"[R].vNGTLAVSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"573.34528"	"1145.68328"	"1145.68399"	"-0.62"	"-0.00036"	"7/86"	"7"	"86"	"1861984.12908936"	"HCD"	"MS2"	"19.65184"	"107.7"	"100.000"	"40.9696"	"11656"	"11656"	"11626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.6"	""	"160.9"	""	"153.3"	""	"165.1"	""	"188.8"	"199.3"	""	"776"	"50"	"35.000"	"28.000"	"0.000387107624763151"	"24"	"0"	"0.0001797"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"573.34967"	"1145.69206"	"1145.69304"	"-0.86"	"-0.00049"	"6/52"	"6"	"52"	"3518601.09301758"	"HCD"	"MS2"	"0"	"242.5"	"100.000"	"36.2225"	"9731"	"9731"	"9714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"389.3"	""	"316.8"	""	"285.8"	""	"421.0"	"0.6"	"426.4"	"456.5"	""	"738"	"31"	"35.000"	"28.000"	"0.0311190525615018"	"26"	"0.002328"	"0.02231"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"573.34967"	"1145.69206"	"1145.69304"	"-0.86"	"-0.00049"	"6/52"	"6"	"52"	"3076040.40234375"	"HCD"	"MS2"	"14.57292"	"215.7"	"100.000"	"36.0899"	"9715"	"9715"	"9692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.6"	""	"264.9"	""	"266.0"	""	"366.8"	""	"379.7"	"408.6"	""	"738"	"27"	"35.000"	"28.000"	"0.0662256708301202"	"26"	"0.001615"	"0.01461"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"573.34973"	"1145.69219"	"1145.69304"	"-0.75"	"-0.00043"	"6/52"	"6"	"52"	"12404935.630188"	"HCD"	"MS2"	"0.8401183"	"777.8"	"100.000"	"36.4907"	"9838"	"9838"	"9829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1259.1"	""	"909.5"	""	"973.2"	""	"1287.4"	""	"1399.5"	"1548.0"	""	"738"	"33"	"35.000"	"28.000"	"0.0203248039973594"	""	"0.002628"	"0.02745"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPSAVAK"	"[K].dPSAVAk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"573.34998"	"1145.69267"	"1145.69304"	"-0.32"	"-0.00019"	"6/52"	"6"	"52"	"12557273.7590332"	"HCD"	"MS2"	"0"	"724.8"	"100.000"	"36.3719"	"9827"	"9827"	"9814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1160.1"	""	"858.2"	""	"893.5"	""	"1222.7"	""	"1280.4"	"1464.3"	""	"743"	"32"	"35.000"	"28.000"	"0.0258201533984238"	""	"0.002673"	"0.02793"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"382.58057"	"1145.72715"	"1145.72943"	"-1.99"	"-0.00076"	"5/48"	"5"	"48"	"865981.29083252"	"HCD"	"MS2"	"44.18933"	"62.1"	"100.000"	"56.4320"	"17965"	"17965"	"17945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.1"	""	"52.8"	""	"71.2"	""	"123.0"	"2.2"	"134.8"	"134.8"	""	"279"	"20"	"31.000"	"24.000"	"0.129590810955801"	"21"	"0.003208"	"0.03483"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"573.36749"	"1145.72771"	"1145.72943"	"-1.50"	"-0.00086"	"10/48"	"10"	"48"	"10781212.2420044"	"HCD"	"MS2"	"17.80573"	"655.8"	"100.000"	"55.7378"	"17687"	"17687"	"17678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"659.8"	""	"642.3"	""	"659.2"	""	"1472.3"	""	"1434.9"	"1368.1"	""	"275"	"28"	"31.000"	"24.000"	"0.0226101111942053"	""	"0.002588"	"0.02634"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"573.36761"	"1145.72795"	"1145.72943"	"-1.29"	"-0.00074"	"10/48"	"10"	"48"	"60914886.1516113"	"HCD"	"MS2"	"6.455813"	"715.1"	"18.298"	"56.5802"	"17990"	"17990"	"17983"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"625.5"	""	"632.3"	""	"751.9"	""	"1523.5"	""	"1636.7"	"1647.8"	""	"275"	"28"	"31.000"	"24.000"	"0.0213453213869236"	""	"0.004314"	"0.05097"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"382.58087"	"1145.72806"	"1145.72943"	"-1.19"	"-0.00046"	"5/48"	"5"	"48"	"4389933.24993896"	"HCD"	"MS2"	"3.145455"	"294.2"	"100.000"	"56.4930"	"17955"	"17955"	"17941"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.9"	""	"244.2"	""	"314.2"	""	"625.4"	""	"671.8"	"699.1"	""	"275"	"21"	"31.000"	"24.000"	"0.107721575880354"	"18"	"0.002508"	"0.02344"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"382.58090"	"1145.72815"	"1145.72943"	"-1.11"	"-0.00043"	"5/48"	"5"	"48"	"5601428.63342285"	"HCD"	"MS2"	"4.003879"	"356.1"	"100.000"	"56.1134"	"17836"	"17836"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.0"	""	"292.1"	""	"348.8"	""	"811.4"	""	"816.3"	"830.4"	""	"275"	"20"	"31.000"	"24.000"	"0.132221688277754"	"19"	"0.001951"	"0.01734"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"573.36774"	"1145.72820"	"1145.72943"	"-1.08"	"-0.00062"	"10/48"	"10"	"48"	"5790846.29022217"	"HCD"	"MS2"	"54.79827"	"382.1"	"100.000"	"56.0302"	"17771"	"17771"	"17757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"425.6"	""	"398.4"	""	"454.4"	""	"807.8"	""	"770.0"	"778.8"	""	"275"	"30"	"31.000"	"24.000"	"0.01375"	"22"	"0.001049"	"0.008816"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"382.58093"	"1145.72824"	"1145.72943"	"-1.03"	"-0.00040"	"6/48"	"6"	"48"	"557868.114013672"	"HCD"	"MS2"	"8.259986"	"48.7"	"100.000"	"50.6945"	"15603"	"15603"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.2"	""	"43.6"	""	"60.8"	""	"97.3"	"0.3"	"105.1"	"97.2"	""	"275"	"11"	"31.000"	"24.000"	"1.22265153705468"	"13"	"0.008868"	"0.1125"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"382.58093"	"1145.72824"	"1145.72943"	"-1.03"	"-0.00040"	"5/48"	"5"	"48"	"3391710.38183594"	"HCD"	"MS2"	"0"	"222.7"	"100.000"	"56.2089"	"17841"	"17841"	"17833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.7"	""	"209.9"	""	"223.6"	""	"507.0"	""	"484.3"	"495.5"	""	"275"	"22"	"31.000"	"24.000"	"0.0855662892107595"	"23"	"0.004213"	"0.04665"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"382.58099"	"1145.72843"	"1145.72943"	"-0.88"	"-0.00033"	"5/48"	"5"	"48"	"2086841.95489502"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"55.8293"	"17723"	"17723"	"17705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.3"	""	"117.1"	""	"134.6"	""	"308.6"	"1.6"	"296.9"	"293.7"	""	"275"	"23"	"31.000"	"24.000"	"0.0679677194606899"	"20"	"0.002588"	"0.0264"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"573.36786"	"1145.72844"	"1145.72943"	"-0.86"	"-0.00049"	"6/48"	"6"	"48"	"6813439.88665771"	"HCD"	"MS2"	"1.712265"	"327.7"	"76.065"	"50.7082"	"15608"	"15608"	"15590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"291.2"	""	"306.7"	""	"374.2"	""	"688.7"	"0.1"	"710.9"	"746.2"	""	"275"	"35"	"31.000"	"24.000"	"0.00411436387533626"	"21"	"0.001615"	"0.01311"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"573.36786"	"1145.72844"	"1145.72943"	"-0.86"	"-0.00049"	"10/48"	"10"	"48"	"50419831.5244141"	"HCD"	"MS2"	"5.924158"	"736.8"	"21.752"	"56.2901"	"17908"	"17908"	"17898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"700.9"	""	"655.3"	""	"766.1"	""	"1576.0"	""	"1630.4"	"1687.4"	""	"275"	"28"	"31.000"	"24.000"	"0.0213945274345698"	""	"0.003317"	"0.03727"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"573.36792"	"1145.72856"	"1145.72943"	"-0.76"	"-0.00043"	"10/48"	"10"	"48"	"135050406.989258"	"HCD"	"MS2"	"2.126312"	"992.9"	"11.733"	"56.3007"	"17878"	"17878"	"17870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"871.9"	""	"849.5"	""	"964.0"	""	"2298.3"	""	"2234.7"	"2249.4"	""	"275"	"28"	"31.000"	"24.000"	"0.0204787148185251"	""	"0.006577"	"0.08139"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"573.36792"	"1145.72856"	"1145.72943"	"-0.76"	"-0.00043"	"10/48"	"10"	"48"	"136947069.494629"	"HCD"	"MS2"	"1.613122"	"932.9"	"11.592"	"56.0151"	"17797"	"17797"	"17787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"881.6"	""	"784.1"	""	"931.2"	""	"2075.0"	""	"2121.4"	"2089.9"	""	"275"	"28"	"31.000"	"24.000"	"0.0199206129862405"	""	"0.004819"	"0.05754"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVEGK"	"[K].aLAVEGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"573.36798"	"1145.72869"	"1145.72943"	"-0.65"	"-0.00037"	"6/48"	"6"	"48"	"4456525.00933838"	"HCD"	"MS2"	"9.285892"	"294.7"	"100.000"	"48.7360"	"14805"	"14805"	"14787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"408.1"	""	"432.9"	""	"397.1"	""	"357.8"	""	"513.0"	"691.2"	""	"275"	"33"	"31.000"	"24.000"	"0.00740120950959897"	""	"0.001348"	"0.01133"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"573.36810"	"1145.72893"	"1145.72943"	"-0.44"	"-0.00025"	"6/48"	"6"	"48"	"4251371.77062988"	"HCD"	"MS2"	"20.78238"	"277.4"	"100.000"	"50.4071"	"15485"	"15485"	"15462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.3"	""	"259.8"	""	"307.4"	""	"593.8"	"0.3"	"616.4"	"576.5"	""	"278"	"34"	"31.000"	"24.000"	"0.00509348228760488"	"22"	"0.000885"	"0.007735"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"573.36810"	"1145.72893"	"1145.72943"	"-0.44"	"-0.00025"	"6/48"	"6"	"48"	"7716866.97644043"	"HCD"	"MS2"	"1.364515"	"483.5"	"100.000"	"50.1643"	"15421"	"15421"	"15403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"476.3"	""	"444.5"	""	"511.4"	""	"1077.6"	""	"1052.5"	"1035.9"	""	"278"	"37"	"31.000"	"24.000"	"0.00274166760319965"	"22"	"0.0003938"	"0.006315"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADALAK"	"[K].vADALAk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"573.36823"	"1145.72917"	"1145.72943"	"-0.22"	"-0.00013"	"5/48"	"5"	"48"	"4610591.03747559"	"HCD"	"MS2"	"5.875641"	"311.1"	"100.000"	"50.4636"	"15543"	"15543"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"392.2"	""	"376.4"	""	"344.4"	""	"597.7"	"3.0"	"621.4"	"617.6"	""	"278"	"33"	"31.000"	"24.000"	"0.00690263326815967"	"21"	"0.001316"	"0.01032"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGDAAK"	"[R].lIGDAAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"5"	"P63018; P0DMW0; P06761"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"573.36841"	"1145.72954"	"1145.72943"	"0.10"	"0.00005"	"6/48"	"6"	"48"	"8511117.53808594"	"HCD"	"MS2"	"3.850532"	"560.6"	"100.000"	"54.4037"	"17144"	"17144"	"17125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"831.7"	""	"723.7"	""	"789.2"	""	"942.4"	"4.3"	"1001.2"	"1016.3"	""	"269"	"25"	"31.000"	"24.000"	"0.0466361063858655"	""	"0.002755"	"0.02938"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGDAAK"	"[R].lIGDAAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"5"	"P63018; P0DMW0; P06761"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"573.36847"	"1145.72966"	"1145.72943"	"0.20"	"0.00012"	"5/48"	"5"	"48"	"9174985.53289795"	"HCD"	"MS2"	"2.478243"	"588.1"	"100.000"	"54.7694"	"17259"	"17259"	"17241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"877.8"	""	"789.3"	""	"802.7"	""	"988.3"	""	"1026.7"	"1085.5"	""	"269"	"22"	"31.000"	"24.000"	"0.084863762832586"	""	"0.002525"	"0.02523"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVEGK"	"[K].aLAVEGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"573.36859"	"1145.72991"	"1145.72943"	"0.42"	"0.00024"	"6/48"	"6"	"48"	"3702307.28894043"	"HCD"	"MS2"	"5.00446"	"257.2"	"100.000"	"48.3988"	"14704"	"14704"	"14686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"363.9"	""	"395.0"	""	"344.4"	""	"307.4"	""	"445.4"	"589.2"	""	"269"	"36"	"31.000"	"24.000"	"0.0035704444808571"	""	"0.0001991"	"0.005113"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSLTDR"	"[K].nVLSLTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"573.83728"	"1146.66728"	"1146.66800"	"-0.63"	"-0.00036"	"6/76"	"6"	"76"	"5833400.53485107"	"HCD"	"MS2"	"12.34314"	"271.1"	"100.000"	"63.2610"	"20736"	"20736"	"20718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"273.0"	""	"290.3"	""	"306.7"	""	"487.6"	""	"618.7"	"603.7"	""	"857"	"45"	"36.000"	"29.000"	"0.00124151172733002"	"23"	"9.9E-05"	"0.000691"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSLTDR"	"[K].nVLSLTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"573.83740"	"1146.66753"	"1146.66800"	"-0.41"	"-0.00024"	"6/76"	"6"	"76"	"1306319.59820557"	"HCD"	"MS2"	"35.53514"	"81.9"	"100.000"	"62.6528"	"20490"	"20490"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.2"	""	"79.2"	""	"85.6"	""	"140.4"	"0.1"	"221.7"	"176.3"	""	"865"	"42"	"36.000"	"29.000"	"0.00248305369904669"	""	"9.9E-05"	"0.0007622"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSLTDR"	"[K].nVLSLTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"573.83740"	"1146.66753"	"1146.66800"	"-0.41"	"-0.00024"	"6/76"	"6"	"76"	"7181837.65740967"	"HCD"	"MS2"	"6.231122"	"316.4"	"100.000"	"63.0321"	"20611"	"20611"	"20593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.3"	""	"344.7"	""	"356.3"	""	"544.7"	""	"730.1"	"726.9"	""	"865"	"43"	"36.000"	"29.000"	"0.00237129787328269"	"24"	"0.0001991"	"0.002079"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSLTDR"	"[K].nVLSLTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"573.83759"	"1146.66789"	"1146.66800"	"-0.09"	"-0.00005"	"6/76"	"6"	"76"	"6777629.1842041"	"HCD"	"MS2"	"5.243859"	"298.2"	"100.000"	"62.9498"	"20610"	"20610"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.5"	""	"332.6"	""	"315.6"	""	"539.7"	""	"676.5"	"695.8"	""	"876"	"43"	"36.000"	"29.000"	"0.00237396389995911"	"24"	"0.0001991"	"0.002166"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSLTDR"	"[K].nVLSLTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"573.83795"	"1146.66863"	"1146.66800"	"0.54"	"0.00031"	"6/76"	"6"	"76"	"5445861.93554688"	"HCD"	"MS2"	"11.39053"	"247.3"	"100.000"	"63.3315"	"20733"	"20733"	"20715"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"228.3"	""	"282.2"	""	"276.5"	""	"445.8"	""	"556.5"	"566.3"	""	"875"	"35"	"36.000"	"29.000"	"0.013520042517247"	"28"	"0.0001991"	"0.003656"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLSLTDR"	"[K].nVLSLTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"573.83801"	"1146.66875"	"1146.66800"	"0.65"	"0.00037"	"6/76"	"6"	"76"	"1381268.66241455"	"HCD"	"MS2"	"33.36914"	"84.5"	"100.000"	"62.7331"	"20489"	"20489"	"20469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.8"	""	"85.8"	""	"97.2"	""	"153.9"	""	"210.2"	"187.0"	""	"875"	"32"	"36.000"	"29.000"	"0.0268520877259598"	""	"0.0001686"	"0.001336"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGTLAVSR"	"[R].vnGTLAVSR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"573.83820"	"1146.66911"	"1146.66800"	"0.97"	"0.00056"	"6/86"	"6"	"86"	"3413124.29638672"	"HCD"	"MS2"	"41.91011"	"209.3"	"100.000"	"47.9890"	"14501"	"14501"	"14481"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.4"	""	"251.0"	""	"262.6"	""	"365.1"	""	"408.9"	"416.2"	""	"875"	"19"	"36.000"	"29.000"	"0.540727002131973"	"18"	"0.0009352"	"0.007914"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPTGSWQR"	"[R].sPTGSWQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"3"	"574.30627"	"1147.60527"	"1147.60574"	"-0.41"	"-0.00023"	"12/66"	"12"	"66"	"3185364.27093506"	"HCD"	"MS2"	"41.44653"	"196.0"	"100.000"	"32.6695"	"8290"	"8290"	"8273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.4"	""	"166.1"	""	"176.5"	""	"270.9"	""	"429.3"	"673.3"	""	"865"	"12"	"36.000"	"29.000"	"2.90392978890475"	"22"	"0.002834"	"0.0303"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPTGSWQR"	"[R].sPTGSWQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"574.30627"	"1147.60527"	"1147.60574"	"-0.41"	"-0.00023"	"6/66"	"6"	"66"	"3807148.74835205"	"HCD"	"MS2"	"34.69511"	"226.2"	"100.000"	"32.6260"	"8310"	"8310"	"8283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.9"	""	"212.7"	""	"219.6"	""	"320.3"	"5.6"	"502.0"	"666.6"	""	"865"	"12"	"36.000"	"29.000"	"2.50602911204626"	"20"	"0.005392"	"0.0684"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTLVSGGGR"	"[R].dGTLVSGGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"574.31635"	"1147.62541"	"1147.62687"	"-1.27"	"-0.00073"	"8/82"	"8"	"82"	"1600748.371521"	"HCD"	"MS2"	"19.86195"	"103.1"	"100.000"	"29.9416"	"7199"	"7199"	"7182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.0"	""	"118.5"	""	"120.7"	""	"177.6"	"0.4"	"205.0"	"228.6"	""	"858"	"25"	"36.000"	"29.000"	"0.139783944729862"	"18"	"0"	"0.0003516"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTLVSGGGR"	"[R].dGTLVSGGGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"574.31696"	"1147.62663"	"1147.62687"	"-0.20"	"-0.00012"	"14/82"	"14"	"82"	"1541774.08679199"	"HCD"	"MS2"	"26.35848"	"102.4"	"100.000"	"29.7959"	"7180"	"7180"	"7164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.3"	""	"114.8"	""	"132.2"	""	"178.2"	""	"206.2"	"213.2"	""	"851"	"25"	"36.000"	"29.000"	"0.133936690765011"	"21"	"0"	"7.159E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDVYIPR"	"[R].vGDVYIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"574.33704"	"1147.66680"	"1147.66727"	"-0.42"	"-0.00024"	"5/56"	"5"	"56"	"3433891.01312256"	"HCD"	"MS2"	"32.35497"	"165.3"	"100.000"	"70.0681"	"23500"	"23500"	"23481"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"219.0"	""	"191.8"	""	"202.4"	""	"286.0"	""	"318.4"	"358.5"	""	"638"	"22"	"35.000"	"28.000"	"0.222736136900618"	"24"	"0.001261"	"0.01001"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDVYIPR"	"[R].vGDVYIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"574.33710"	"1147.66692"	"1147.66727"	"-0.31"	"-0.00018"	"6/56"	"6"	"56"	"1217115.42718506"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"70.6719"	"23744"	"23744"	"23730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.5"	""	"63.7"	""	"83.1"	""	"111.3"	"1.4"	"115.2"	"129.0"	""	"639"	"24"	"35.000"	"28.000"	"0.118432490609533"	"20"	"0.0001991"	"0.004177"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDVYIPR"	"[R].vGDVYIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"574.33722"	"1147.66716"	"1147.66727"	"-0.10"	"-0.00006"	"4/56"	"4"	"56"	"6801682.02502441"	"HCD"	"MS2"	"0"	"258.5"	"100.000"	"70.3564"	"23617"	"23617"	"23604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.7"	""	"281.6"	""	"299.9"	""	"502.8"	""	"484.6"	"540.4"	""	"639"	"25"	"35.000"	"28.000"	"0.09109003364675"	"19"	"0.001488"	"0.01272"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDVYIPR"	"[R].vGDVYIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"574.33734"	"1147.66741"	"1147.66727"	"0.11"	"0.00007"	"6/56"	"6"	"56"	"7182930.30810547"	"HCD"	"MS2"	"0"	"287.6"	"100.000"	"70.3155"	"23567"	"23567"	"23552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"390.5"	""	"321.2"	""	"322.8"	""	"572.6"	""	"559.6"	"570.2"	""	"636"	"27"	"35.000"	"28.000"	"0.0690918974878671"	"17"	"0.001951"	"0.01666"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDVYIPR"	"[R].vGDVYIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"574.33740"	"1147.66753"	"1147.66727"	"0.22"	"0.00013"	"6/56"	"6"	"56"	"1104553.39202881"	"HCD"	"MS2"	"2.144404"	"60.6"	"100.000"	"70.6059"	"23685"	"23685"	"23668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.7"	""	"69.1"	""	"84.0"	""	"108.9"	""	"120.3"	"125.2"	""	"636"	"23"	"35.000"	"28.000"	"0.168045590064507"	"18"	"0.0001991"	"0.004999"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDVYIPR"	"[R].vGDVYIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"Q6PDU1"	"Serine/arginine-rich splicing factor 2 OS=Rattus norvegicus OX=10116 GN=Srsf2 PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"574.33740"	"1147.66753"	"1147.66727"	"0.22"	"0.00013"	"6/56"	"6"	"56"	"4183496.09338379"	"HCD"	"MS2"	"17.85849"	"194.3"	"100.000"	"70.0295"	"23450"	"23450"	"23432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"276.9"	""	"231.3"	""	"218.4"	""	"364.0"	""	"362.6"	"391.3"	""	"636"	"22"	"35.000"	"28.000"	"0.191173248519682"	"21"	"0.001348"	"0.0108"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDPHALR"	"[K].iPDPHALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"383.23074"	"1147.67768"	"1147.67851"	"-0.72"	"-0.00028"	"9/56"	"9"	"56"	"2477653.86260986"	"HCD"	"MS2"	"14.36784"	"68.3"	"100.000"	"45.4767"	"13486"	"13486"	"13464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.7"	""	"89.5"	""	"95.8"	""	"111.7"	"0.8"	"133.9"	"113.0"	""	"525"	"18"	"34.000"	"27.000"	"0.432642627775446"	"14"	"0.0005161"	"0.006993"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDPHALR"	"[K].iPDPHALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"Q6AYQ8"	"Acylpyruvase FAHD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fahd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"383.23087"	"1147.67804"	"1147.67851"	"-0.41"	"-0.00016"	"8/56"	"8"	"56"	"2415914.11016846"	"HCD"	"MS2"	"20.59346"	"68.6"	"100.000"	"45.1764"	"13398"	"13398"	"13376"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.4"	""	"105.6"	""	"87.7"	""	"112.0"	""	"125.1"	"122.1"	""	"530"	"20"	"34.000"	"27.000"	"0.269926717834341"	"19"	"0.001488"	"0.01215"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGATAEK"	"[R].lGATAEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"574.35712"	"1147.70696"	"1147.70869"	"-1.51"	"-0.00087"	"10/52"	"10"	"52"	"22696544.3007202"	"HCD"	"MS2"	"0"	"1330.5"	"85.526"	"39.0012"	"10859"	"10859"	"10845"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1841.5"	""	"1681.2"	""	"1709.0"	""	"2266.2"	"2.6"	"2434.3"	"2678.5"	""	"355"	"23"	"32.000"	"25.000"	"0.0877401469401633"	"23"	"0.004158"	"0.04501"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTTPAK"	"[K].aTTTPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"574.35718"	"1147.70708"	"1147.70869"	"-1.41"	"-0.00081"	"5/52"	"5"	"52"	"3162471.18695068"	"HCD"	"MS2"	"15.49318"	"230.9"	"100.000"	"26.8936"	"6011"	"6011"	"6002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.2"	""	"292.0"	""	"297.6"	""	"433.6"	"4.7"	"484.0"	"394.6"	""	"355"	"28"	"32.000"	"25.000"	"0.0300053265366679"	"17"	"0.004959"	"0.06165"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGATAEK"	"[R].lGATAEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"574.35730"	"1147.70732"	"1147.70869"	"-1.20"	"-0.00069"	"6/52"	"6"	"52"	"6406036.35089111"	"HCD"	"MS2"	"18.72176"	"479.4"	"100.000"	"39.1637"	"10960"	"10960"	"10950"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"626.4"	""	"612.9"	""	"613.3"	""	"822.9"	""	"909.8"	"965.6"	""	"355"	"20"	"32.000"	"25.000"	"0.183315149522648"	"24"	"0.003704"	"0.04024"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTTPAK"	"[K].aTTTPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"574.35736"	"1147.70745"	"1147.70869"	"-1.09"	"-0.00062"	"5/52"	"5"	"52"	"3014210.93786621"	"HCD"	"MS2"	"19.0658"	"213.2"	"100.000"	"27.1812"	"6088"	"6088"	"6073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.4"	""	"259.4"	""	"273.0"	""	"422.3"	""	"443.4"	"370.9"	""	"355"	"32"	"32.000"	"25.000"	"0.0121394317392454"	"22"	"0.00504"	"0.06406"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGIVSK"	"[K].aDGIVSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"574.35742"	"1147.70757"	"1147.70869"	"-0.98"	"-0.00056"	"10/56"	"10"	"56"	"5715877.46679688"	"HCD"	"MS2"	"5.204392"	"400.6"	"100.000"	"44.7653"	"13230"	"13230"	"13215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"504.4"	""	"442.9"	""	"484.7"	""	"802.7"	""	"764.5"	"806.1"	""	"355"	"23"	"32.000"	"25.000"	"0.0798359242435586"	"22"	"0.00307"	"0.03307"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGIVSK"	"[K].aDGIVSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"P05765"	"40S ribosomal protein S21 OS=Rattus norvegicus OX=10116 GN=Rps21 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"574.35748"	"1147.70769"	"1147.70869"	"-0.88"	"-0.00050"	"6/56"	"6"	"56"	"5735368.27563477"	"HCD"	"MS2"	"3.712898"	"388.6"	"100.000"	"44.9962"	"13290"	"13290"	"13274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"478.3"	""	"445.3"	""	"436.5"	""	"831.4"	""	"727.1"	"774.9"	""	"355"	"28"	"32.000"	"25.000"	"0.0313471713171794"	"24"	"0.002525"	"0.02381"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVTVAK"	"[K].dGVTVAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"574.35748"	"1147.70769"	"1147.70869"	"-0.88"	"-0.00050"	"10/54"	"10"	"54"	"7181905.99511719"	"HCD"	"MS2"	"5.341529"	"522.3"	"100.000"	"40.0644"	"11288"	"11288"	"11272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"813.4"	""	"723.3"	""	"718.8"	""	"897.8"	"5.5"	"914.3"	"869.0"	""	"355"	"28"	"32.000"	"25.000"	"0.0260734414281786"	""	"0.002834"	"0.03023"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVTVAK"	"[K].dGVTVAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"574.35754"	"1147.70781"	"1147.70869"	"-0.77"	"-0.00044"	"5/54"	"5"	"54"	"5949709.98986816"	"HCD"	"MS2"	"14.75671"	"417.4"	"100.000"	"40.3654"	"11410"	"11410"	"11389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"588.4"	""	"511.2"	""	"565.0"	""	"739.7"	""	"781.1"	"773.9"	""	"355"	"24"	"32.000"	"25.000"	"0.0677951080741083"	""	"0.003001"	"0.03221"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVVDTK"	"[R].gAVVDTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"574.35767"	"1147.70806"	"1147.70869"	"-0.56"	"-0.00032"	"6/50"	"6"	"50"	"1505961.99676514"	"HCD"	"MS2"	"23.4368"	"154.4"	"100.000"	"35.5689"	"9502"	"9502"	"9490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.9"	""	"186.0"	""	"163.7"	""	"276.3"	""	"289.7"	"345.1"	""	"357"	"15"	"32.000"	"25.000"	"0.606231111573879"	"24"	"0.004234"	"0.04936"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGATAEK"	"[R].lGATAEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"574.35767"	"1147.70806"	"1147.70869"	"-0.56"	"-0.00032"	"6/52"	"6"	"52"	"5441919.95465088"	"HCD"	"MS2"	"11.07221"	"378.5"	"100.000"	"39.2716"	"10969"	"10969"	"10960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"497.1"	""	"486.6"	""	"492.4"	""	"624.1"	"1.8"	"732.0"	"755.8"	""	"357"	"17"	"32.000"	"25.000"	"0.347246774569645"	"20"	"0.003357"	"0.03766"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLGGIK"	"[K].sDLGGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"574.35785"	"1147.70842"	"1147.70869"	"-0.24"	"-0.00014"	"6/50"	"6"	"50"	"5836846.60559082"	"HCD"	"MS2"	"6.258657"	"400.8"	"100.000"	"51.5409"	"15944"	"15944"	"15926"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"554.4"	""	"564.1"	""	"571.0"	""	"682.4"	"2.1"	"704.8"	"716.4"	""	"357"	"23"	"32.000"	"25.000"	"0.0890508810116122"	"23"	"0.003786"	"0.04075"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVTVAK"	"[K].dGVTVAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"574.35785"	"1147.70842"	"1147.70869"	"-0.24"	"-0.00014"	"6/54"	"6"	"54"	"5710136.43658447"	"HCD"	"MS2"	"20.54162"	"412.1"	"100.000"	"40.3063"	"11420"	"11420"	"11402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"584.0"	""	"496.9"	""	"540.8"	""	"723.3"	""	"780.0"	"790.5"	""	"357"	"23"	"32.000"	"25.000"	"0.0956397033661315"	""	"0.002628"	"0.02738"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLGGIK"	"[K].sDLGGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"574.35785"	"1147.70842"	"1147.70869"	"-0.24"	"-0.00014"	"10/50"	"10"	"50"	"9538407.46820068"	"HCD"	"MS2"	"25.26309"	"757.4"	"100.000"	"51.8278"	"16060"	"16060"	"16044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"994.3"	""	"944.2"	""	"1062.0"	""	"1282.6"	""	"1448.8"	"1468.7"	""	"357"	"24"	"32.000"	"25.000"	"0.0797330211989469"	"25"	"0.002755"	"0.02921"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVTVAK"	"[K].dGVTVAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"574.35785"	"1147.70842"	"1147.70869"	"-0.24"	"-0.00014"	"10/54"	"10"	"54"	"7644374.28814697"	"HCD"	"MS2"	"4.607355"	"542.2"	"100.000"	"40.0007"	"11296"	"11296"	"11282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"852.0"	""	"689.0"	""	"760.1"	""	"985.1"	"5.8"	"924.8"	"913.5"	""	"357"	"25"	"32.000"	"25.000"	"0.0511255767628325"	""	"0.00307"	"0.03435"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVVDTK"	"[R].gAVVDTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"P15800"	"Laminin subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Lamb2 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"574.35791"	"1147.70854"	"1147.70869"	"-0.13"	"-0.00008"	"6/50"	"6"	"50"	"1730568.08441162"	"HCD"	"MS2"	"20.4743"	"163.5"	"100.000"	"35.7157"	"9525"	"9525"	"9504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.6"	""	"186.5"	""	"189.2"	""	"278.0"	""	"317.3"	"359.9"	""	"357"	"15"	"32.000"	"25.000"	"0.609029347245142"	"25"	"0.005426"	"0.0693"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLGGIK"	"[K].sDLGGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"574.35797"	"1147.70867"	"1147.70869"	"-0.03"	"-0.00001"	"10/50"	"10"	"50"	"9401626.40307617"	"HCD"	"MS2"	"13.30309"	"680.2"	"100.000"	"51.4774"	"15952"	"15952"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"929.9"	""	"863.1"	""	"941.4"	""	"1135.0"	""	"1281.2"	"1310.5"	""	"355"	"24"	"32.000"	"25.000"	"0.0743358578084305"	"25"	"0.003001"	"0.03203"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLGGIK"	"[K].sDLGGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"574.35809"	"1147.70891"	"1147.70869"	"0.19"	"0.00011"	"5/50"	"5"	"50"	"4693215.44799805"	"HCD"	"MS2"	"0"	"310.4"	"100.000"	"51.1964"	"15841"	"15841"	"15823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"448.0"	""	"447.3"	""	"428.0"	""	"510.9"	"0.0"	"556.5"	"548.3"	""	"348"	"23"	"32.000"	"25.000"	"0.0880134911885418"	""	"0.003317"	"0.03648"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLGGIK"	"[K].sDLGGIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"574.35828"	"1147.70928"	"1147.70869"	"0.51"	"0.00029"	"10/50"	"10"	"50"	"2814890.5501709"	"HCD"	"MS2"	"49.10893"	"226.0"	"100.000"	"52.1294"	"16182"	"16182"	"16163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.9"	""	"286.7"	""	"311.4"	""	"386.2"	""	"413.7"	"467.8"	""	"350"	"23"	"32.000"	"25.000"	"0.0933336067103337"	"24"	"0.002084"	"0.01863"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMVDPNSR"	"[R].tMVDPNSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"574.79993"	"1148.59258"	"1148.59312"	"-0.48"	"-0.00027"	"6/72"	"6"	"72"	"2069794.33563232"	"HCD"	"MS2"	"12.25561"	"118.1"	"100.000"	"30.5495"	"7444"	"7444"	"7425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.4"	""	"148.6"	""	"161.5"	""	"152.7"	""	"224.3"	"259.2"	""	"576"	"34"	"34.000"	"27.000"	"0.0118684085500031"	""	"0.0001991"	"0.005582"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMVDPNSR"	"[R].tMVDPNSR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"Q9HB97"	"Alpha-parvin OS=Rattus norvegicus OX=10116 GN=Parva PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"574.80023"	"1148.59319"	"1148.59312"	"0.06"	"0.00003"	"6/72"	"6"	"72"	"2288971.90631104"	"HCD"	"MS2"	"18.25306"	"130.5"	"100.000"	"30.3905"	"7420"	"7420"	"7399"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.1"	""	"164.2"	""	"181.5"	""	"175.0"	"0.1"	"247.6"	"280.8"	""	"587"	"35"	"34.000"	"27.000"	"0.00858238722897019"	""	"0.000264"	"0.006091"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIWQESR"	"[K].tIWQESR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"574.81567"	"1148.62407"	"1148.62614"	"-1.80"	"-0.00103"	"5/64"	"5"	"64"	"3717628.85632324"	"HCD"	"MS2"	"10.6533"	"232.1"	"100.000"	"46.4261"	"13871"	"13871"	"13862"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"292.5"	""	"329.0"	""	"318.8"	""	"352.8"	"18.8"	"418.0"	"471.1"	""	"600"	"28"	"34.000"	"27.000"	"0.0494448717457653"	""	"0.004114"	"0.04455"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIWQESR"	"[K].tIWQESR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"574.81573"	"1148.62419"	"1148.62614"	"-1.69"	"-0.00097"	"5/64"	"5"	"64"	"3909731.26098633"	"HCD"	"MS2"	"0"	"235.6"	"100.000"	"46.1189"	"13782"	"13782"	"13774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"311.5"	""	"342.7"	""	"319.0"	""	"355.1"	"13.1"	"426.1"	"465.9"	""	"598"	"33"	"34.000"	"27.000"	"0.0162431849116237"	""	"0.003001"	"0.03222"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSAWATR"	"[R].eVSAWATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"574.82788"	"1148.64849"	"1148.62614"	"19.46"	"0.01117"	"6/68"	"6"	"68"	"1197918.62304688"	"HCD"	"MS2"	"49.49285"	"95.1"	"100.000"	"46.7137"	"13983"	"13983"	"13970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.3"	""	"116.0"	""	"129.3"	""	"156.2"	"5.7"	"179.0"	"186.3"	""	"718"	"19"	"35.000"	"28.000"	"0.480943930785911"	"22"	"0.002525"	"0.02471"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGGNDK"	"[R].iSGGNDk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.1923"	"0.0000"	"1"	"1"	"1"	"574.83716"	"1148.66704"	"1148.66756"	"-0.45"	"-0.00026"	"6/60"	"6"	"60"	"5674957.3170166"	"HCD"	"MS2"	"15.10745"	"434.5"	"100.000"	"28.9753"	"6807"	"6807"	"6779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"733.3"	""	"595.5"	""	"630.7"	""	"748.0"	""	"734.9"	"671.2"	""	"659"	"26"	"35.000"	"28.000"	"0.0911707272163093"	""	"0.003357"	"0.03752"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGGNDK"	"[R].iSGGNDk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"574.83722"	"1148.66716"	"1148.66756"	"-0.35"	"-0.00020"	"6/60"	"6"	"60"	"942328.302246094"	"HCD"	"MS2"	"0"	"90.0"	"100.000"	"29.3130"	"6945"	"6945"	"6915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.6"	""	"112.6"	""	"118.0"	""	"160.8"	""	"178.6"	"171.8"	""	"659"	"22"	"35.000"	"28.000"	"0.200842407640636"	""	"0.001951"	"0.01704"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGGNSK"	"[K].dLGGNSk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"574.83722"	"1148.66716"	"1148.66756"	"-0.35"	"-0.00020"	"6/62"	"6"	"62"	"5789628.75067139"	"HCD"	"MS2"	"1.334135"	"433.0"	"100.000"	"31.4703"	"7807"	"7807"	"7786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"848.6"	""	"598.2"	""	"639.5"	""	"587.6"	""	"705.4"	"713.8"	""	"659"	"23"	"35.000"	"28.000"	"0.163627169917886"	"19"	"0.004314"	"0.05109"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGGNDK"	"[R].iSGGNDk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"574.83722"	"1148.66716"	"1148.66756"	"-0.35"	"-0.00020"	"6/60"	"6"	"60"	"6817155.07562256"	"HCD"	"MS2"	"0"	"512.3"	"100.000"	"28.7954"	"6775"	"6775"	"6748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"896.2"	""	"697.2"	""	"749.6"	""	"840.0"	""	"874.4"	"789.2"	""	"659"	"25"	"35.000"	"28.000"	"0.0939410519142538"	""	"0.002799"	"0.02954"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGGNSK"	"[K].dLGGNSk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"574.83734"	"1148.66741"	"1148.66756"	"-0.13"	"-0.00008"	"6/62"	"6"	"62"	"5942493.19134521"	"HCD"	"MS2"	"0"	"453.1"	"100.000"	"31.3495"	"7796"	"7796"	"7776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"834.5"	""	"617.1"	""	"650.7"	""	"652.2"	""	"774.2"	"765.6"	""	"659"	"17"	"35.000"	"28.000"	"0.675857937923024"	"24"	"0.005152"	"0.06589"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGGAASK"	"[K].vTGGAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"574.85486"	"1148.70244"	"1148.70394"	"-1.31"	"-0.00075"	"7/66"	"7"	"66"	"5064211.09735107"	"HCD"	"MS2"	"4.756621"	"343.6"	"100.000"	"28.3341"	"6591"	"6591"	"6575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"450.3"	""	"490.9"	""	"535.8"	""	"574.9"	""	"647.8"	"559.8"	""	"304"	"32"	"31.000"	"24.000"	"0.00907493635607432"	""	"0.0001991"	"0.002947"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGGAASK"	"[K].vTGGAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"574.85510"	"1148.70293"	"1148.70394"	"-0.88"	"-0.00051"	"6/66"	"6"	"66"	"7025227.21099854"	"HCD"	"MS2"	"15.21908"	"478.8"	"100.000"	"28.4269"	"6584"	"6584"	"6565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"640.0"	""	"710.5"	""	"738.9"	""	"821.9"	""	"869.0"	"758.5"	""	"304"	"33"	"31.000"	"24.000"	"0.00689991257308309"	""	"0.0001686"	"0.001883"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGGAASK"	"[K].vTGGAASk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"P17078"	"60S ribosomal protein L35 OS=Rattus norvegicus OX=10116 GN=Rpl35 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"574.85522"	"1148.70317"	"1148.70394"	"-0.67"	"-0.00039"	"6/66"	"6"	"66"	"1160667.66351318"	"HCD"	"MS2"	"0"	"99.5"	"100.000"	"28.7526"	"6716"	"6716"	"6697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.2"	""	"125.0"	""	"155.0"	""	"160.5"	""	"189.8"	"183.3"	""	"304"	"25"	"31.000"	"24.000"	"0.0485113753975316"	""	"9.9E-05"	"0.00102"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SCHTGVDR"	"[K].scHTGVDR.[T]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"575.26996"	"1149.53264"	"1149.53423"	"-1.38"	"-0.00079"	"7/68"	"7"	"68"	"2469854.38183594"	"HCD"	"MS2"	"28.95371"	"138.4"	"100.000"	"21.1615"	"3740"	"3740"	"3720"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.4"	""	"176.9"	""	"240.7"	""	"208.1"	"0.4"	"241.6"	"214.1"	""	"222"	"39"	"30.000"	"23.000"	"0.00148362102336655"	"22"	"9.9E-05"	"0.0004268"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SCHTGVDR"	"[K].scHTGVDR.[T]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"575.27014"	"1149.53301"	"1149.53423"	"-1.06"	"-0.00061"	"7/68"	"7"	"68"	"2519510.31561279"	"HCD"	"MS2"	"15.66203"	"147.2"	"100.000"	"21.1564"	"3775"	"3775"	"3751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"243.6"	""	"193.4"	""	"244.2"	""	"209.1"	""	"273.8"	"230.0"	""	"222"	"38"	"30.000"	"23.000"	"0.00164559507451201"	"22"	"9.9E-05"	"0.0004715"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SCHTGVDR"	"[K].scHTGVDR.[T]"	"N-Term(TMT6plex); C2(Methylthio)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"383.84924"	"1149.53318"	"1149.53423"	"-0.92"	"-0.00035"	"6/68"	"6"	"68"	"15347370.4875488"	"HCD"	"MS2"	"35.26693"	"285.7"	"45.380"	"21.1774"	"3783"	"3783"	"3767"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"417.6"	""	"374.4"	""	"454.6"	""	"453.8"	""	"506.6"	"503.1"	""	"222"	"18"	"30.000"	"23.000"	"0.175518532359013"	"14"	"0.00511"	"0.06456"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNNPDR"	"[R].aSFNNPDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"575.29529"	"1149.58330"	"1149.58500"	"-1.48"	"-0.00085"	"6/74"	"6"	"74"	"1104551.5425415"	"HCD"	"MS2"	"37.7198"	"96.5"	"100.000"	"29.0989"	"6898"	"6898"	"6873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.3"	""	"118.0"	""	"119.3"	""	"186.0"	"1.5"	"190.8"	"184.6"	""	"529"	"8"	"34.000"	"27.000"	"4.44043662793417"	"17"	"0.006777"	"0.0839"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"575.32568"	"1149.64409"	"1149.64654"	"-2.13"	"-0.00122"	"4/58"	"4"	"58"	"5992698.39373779"	"HCD"	"MS2"	"50.81848"	"344.4"	"100.000"	"56.3807"	"17910"	"17910"	"17891"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"303.0"	""	"340.8"	""	"403.6"	""	"704.9"	""	"804.9"	"724.7"	""	"682"	"11"	"35.000"	"28.000"	"2.7086592804098"	"14"	"0.001488"	"0.01232"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"575.32611"	"1149.64495"	"1149.64654"	"-1.39"	"-0.00080"	"6/58"	"6"	"58"	"5017522.7689209"	"HCD"	"MS2"	"3.309079"	"245.6"	"100.000"	"56.3290"	"17924"	"17924"	"17907"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.0"	""	"273.7"	""	"313.1"	""	"427.5"	""	"527.8"	"514.2"	""	"681"	"28"	"35.000"	"28.000"	"0.0574271305144867"	"24"	"0.0001991"	"0.002757"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"575.32617"	"1149.64507"	"1149.64654"	"-1.28"	"-0.00074"	"6/58"	"6"	"58"	"4565434.92193604"	"HCD"	"MS2"	"10.31026"	"214.1"	"100.000"	"56.6625"	"18022"	"18022"	"18010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"265.4"	""	"249.6"	""	"261.0"	""	"376.1"	""	"449.8"	"435.8"	""	"681"	"29"	"35.000"	"28.000"	"0.0461441994905528"	"24"	"0.0001991"	"0.003831"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPYALVR"	"[K].sDPYALVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.32623"	"1149.64519"	"1149.64654"	"-1.17"	"-0.00068"	"4/58"	"4"	"58"	"5465306.39611816"	"HCD"	"MS2"	"59.51637"	"320.2"	"100.000"	"56.0332"	"17804"	"17804"	"17787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.3"	""	"316.9"	"7.5"	"374.2"	""	"669.8"	""	"754.9"	"668.8"	""	"680"	"10"	"35.000"	"28.000"	"3.77119437189216"	"13"	"0.001348"	"0.01131"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].GLFIIDDk.[G]"	"K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"575.33899"	"1149.67070"	"1149.67169"	"-0.86"	"-0.00049"	"5/58"	"5"	"58"	"427585.340270996"	"HCD"	"MS2"	"39.57236"	"21.5"	"100.000"	"98.8550"	"35130"	"35130"	"35110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.0"	""	"28.5"	""	"31.4"	""	"32.6"	""	"40.9"	"42.6"	""	"553"	"31"	"34.000"	"27.000"	"0.0226305513919269"	"22"	"0.002588"	"0.0265"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFIIDDK"	"[R].GLFIIDDk.[G]"	"K8(TMT6plex)"	"2"	"2"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1;Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q9Z0V5; Q63716"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1; Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"575.33984"	"1149.67241"	"1149.67169"	"0.63"	"0.00036"	"5/58"	"5"	"58"	"461212.751708984"	"HCD"	"MS2"	"34.46879"	"23.1"	"100.000"	"98.8198"	"35086"	"35086"	"35063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"30.4"	""	"28.6"	""	"46.1"	""	"44.3"	"40.7"	""	"593"	"33"	"34.000"	"27.000"	"0.0135214945579559"	""	"0.00212"	"0.01954"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGEYGLR"	"[K].lIGEYGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"575.34473"	"1149.68218"	"1149.68292"	"-0.65"	"-0.00037"	"6/56"	"6"	"56"	"1783693.67791748"	"HCD"	"MS2"	"3.374811"	"82.6"	"100.000"	"84.5624"	"29368"	"29368"	"29351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.8"	""	"120.3"	""	"120.0"	""	"145.2"	""	"149.9"	"147.2"	""	"449"	"33"	"33.000"	"26.000"	"0.0117548298013501"	"19"	"0.0001686"	"0.001034"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGEYGLR"	"[K].lIGEYGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"575.34509"	"1149.68291"	"1149.68292"	"-0.01"	"-0.00001"	"6/56"	"6"	"56"	"1282556.66278076"	"HCD"	"MS2"	"26.73941"	"62.0"	"100.000"	"84.2214"	"29201"	"29201"	"29178"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.6"	""	"86.1"	""	"90.5"	""	"100.4"	"1.3"	"110.1"	"106.3"	""	"463"	"38"	"33.000"	"26.000"	"0.00332315803821372"	"21"	"9.9E-05"	"0.0008863"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGEYGLR"	"[K].lIGEYGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"575.34521"	"1149.68315"	"1149.68292"	"0.20"	"0.00011"	"6/56"	"6"	"56"	"1452782.74438477"	"HCD"	"MS2"	"15.409"	"69.2"	"100.000"	"84.2439"	"29238"	"29238"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.5"	""	"99.7"	""	"105.2"	""	"108.8"	"0.3"	"128.3"	"118.9"	""	"461"	"35"	"33.000"	"26.000"	"0.00688130693660589"	"21"	"9.9E-05"	"0.0005841"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIGEYGLR"	"[K].lIGEYGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"575.34558"	"1149.68389"	"1149.68292"	"0.84"	"0.00048"	"6/56"	"6"	"56"	"1855474.20812988"	"HCD"	"MS2"	"1.917042"	"88.4"	"100.000"	"84.5190"	"29321"	"29321"	"29302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.3"	""	"118.5"	""	"144.7"	""	"139.4"	""	"161.2"	"156.5"	""	"465"	"35"	"33.000"	"26.000"	"0.00664389801334676"	"22"	"0.0001991"	"0.002048"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGASEK"	"[R].iSGASEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"575.34741"	"1149.68755"	"1149.68796"	"-0.36"	"-0.00021"	"12/56"	"12"	"56"	"17832918.1034546"	"HCD"	"MS2"	"3.70561"	"1218.7"	"100.000"	"32.8147"	"8349"	"8349"	"8329"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1587.7"	""	"1526.4"	""	"1566.5"	""	"2050.5"	""	"2358.9"	"2489.8"	""	"397"	"24"	"32.000"	"25.000"	"0.0837067559305736"	"21"	"0.004234"	"0.04878"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGASEK"	"[R].iSGASEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"575.34766"	"1149.68804"	"1149.68796"	"0.07"	"0.00004"	"6/56"	"6"	"56"	"14130549.9714355"	"HCD"	"MS2"	"6.626789"	"919.7"	"100.000"	"32.6856"	"8334"	"8334"	"8315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1229.2"	""	"1213.7"	""	"1172.0"	""	"1532.9"	""	"1727.5"	"1867.4"	""	"396"	"25"	"32.000"	"25.000"	"0.0614702798449415"	"21"	"0.002799"	"0.02973"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADWSSLSR"	"[K].aDWSSLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"575.80548"	"1150.60369"	"1150.60540"	"-1.49"	"-0.00086"	"7/66"	"7"	"66"	"2119283.34259033"	"HCD"	"MS2"	"29.03378"	"121.7"	"100.000"	"57.6470"	"18458"	"18458"	"18434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.9"	""	"151.9"	""	"147.8"	""	"219.9"	""	"255.5"	"248.8"	""	"600"	"28"	"34.000"	"27.000"	"0.0450942589827007"	"22"	"0.0001991"	"0.003967"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADWSSLSR"	"[K].aDWSSLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"575.80554"	"1150.60381"	"1150.60540"	"-1.39"	"-0.00080"	"6/66"	"6"	"66"	"3607588.19451904"	"HCD"	"MS2"	"1.330112"	"183.5"	"100.000"	"58.1858"	"18643"	"18643"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"218.3"	""	"257.2"	""	"258.1"	""	"282.6"	"0.9"	"351.8"	"371.6"	""	"600"	"26"	"34.000"	"27.000"	"0.0684102621600125"	"19"	"0.0005161"	"0.006778"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADWSSLSR"	"[K].aDWSSLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"575.80573"	"1150.60417"	"1150.60540"	"-1.07"	"-0.00061"	"6/66"	"6"	"66"	"1935423.91882324"	"HCD"	"MS2"	"32.61695"	"118.6"	"100.000"	"57.8958"	"18524"	"18524"	"18502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.4"	""	"150.8"	""	"151.3"	""	"193.4"	"0.3"	"240.8"	"250.9"	""	"596"	"28"	"34.000"	"27.000"	"0.0473386931082138"	"22"	"0.0001991"	"0.002659"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADWSSLSR"	"[K].aDWSSLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"575.80591"	"1150.60454"	"1150.60540"	"-0.75"	"-0.00043"	"6/66"	"6"	"66"	"3450609.56201172"	"HCD"	"MS2"	"1.862823"	"170.4"	"100.000"	"57.9368"	"18576"	"18576"	"18558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.9"	""	"212.1"	""	"240.1"	""	"265.5"	""	"340.9"	"349.5"	""	"621"	"26"	"34.000"	"27.000"	"0.0699941275373329"	"22"	"0.0001991"	"0.005936"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIGEGMTR"	"[K].sAIGEGMTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"575.80737"	"1150.60747"	"1150.60877"	"-1.13"	"-0.00065"	"7/78"	"7"	"78"	"2865830.87683105"	"HCD"	"MS2"	"13.36355"	"187.7"	"100.000"	"34.0707"	"8861"	"8861"	"8837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.9"	""	"255.9"	""	"268.8"	""	"232.2"	""	"352.5"	"371.8"	""	"610"	"52"	"34.000"	"27.000"	"0.000171909485026916"	"24"	"0"	"5.037E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAIGEGMTR"	"[K].sAIGEGMTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"575.80786"	"1150.60845"	"1150.60877"	"-0.28"	"-0.00016"	"7/78"	"7"	"78"	"2785700.38134766"	"HCD"	"MS2"	"4.463314"	"182.1"	"100.000"	"33.9234"	"8838"	"8838"	"8824"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"286.4"	""	"243.1"	""	"245.5"	""	"223.5"	"1.6"	"361.2"	"365.0"	""	"614"	"55"	"34.000"	"27.000"	"0.000100493593327803"	"24"	"9.9E-05"	"0.0006299"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIYFAHR"	"[K].dIYFAHR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ET64"	"Sphingomyelin phosphodiesterase 2 OS=Rattus norvegicus OX=10116 GN=Smpd2 PE=1 SV=1"	"Q9ET64"	"Sphingomyelin phosphodiesterase 2 OS=Rattus norvegicus OX=10116 GN=Smpd2 PE=1 SV=1"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"384.21133"	"1150.61945"	"1150.62066"	"-1.05"	"-0.00040"	"7/48"	"7"	"48"	"1293662.11199951"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"42.5845"	"12308"	"12308"	"12286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.7"	""	"44.9"	""	"41.7"	""	"69.4"	"2.2"	"68.6"	"68.0"	""	"693"	"11"	"35.000"	"28.000"	"2.48715721925527"	"22"	"0.009411"	"0.1239"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.0476"	"0.0000"	"1"	"1"	"1"	"575.81750"	"1150.62773"	"1150.63055"	"-2.45"	"-0.00141"	"8/56"	"8"	"56"	"747547.270507813"	"HCD"	"MS2"	"10.80681"	"40.0"	"100.000"	"99.4718"	"35378"	"35378"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.8"	""	"52.4"	""	"60.3"	""	"61.6"	""	"72.3"	"76.1"	""	"702"	"21"	"35.000"	"28.000"	"0.258408691220653"	"20"	"0.004314"	"0.05104"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"575.81848"	"1150.62969"	"1150.63055"	"-0.75"	"-0.00043"	"8/56"	"8"	"56"	"1096633.17736816"	"HCD"	"MS2"	"19.31248"	"53.5"	"100.000"	"99.4453"	"35338"	"35338"	"35322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.5"	""	"75.9"	""	"70.3"	""	"82.7"	""	"97.1"	"102.4"	""	"712"	"24"	"35.000"	"28.000"	"0.14270855147532"	""	"0.001615"	"0.01378"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"575.81873"	"1150.63017"	"1150.63055"	"-0.33"	"-0.00019"	"5/56"	"5"	"56"	"6503739.50262451"	"HCD"	"MS2"	"0.9206175"	"267.9"	"100.000"	"99.7475"	"35462"	"35462"	"35445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"389.1"	""	"340.5"	""	"386.9"	""	"447.7"	""	"492.1"	"486.1"	""	"722"	"35"	"35.000"	"28.000"	"0.0111816836701718"	"24"	"0.001615"	"0.01445"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"575.81879"	"1150.63030"	"1150.63055"	"-0.22"	"-0.00013"	"8/56"	"8"	"56"	"790975.075134277"	"HCD"	"MS2"	"2.227151"	"43.2"	"100.000"	"100.0713"	"35621"	"35621"	"35602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"52.3"	""	"64.3"	""	"66.0"	""	"77.6"	"88.9"	""	"722"	"20"	"35.000"	"28.000"	"0.377143999138709"	"23"	"0.003661"	"0.03993"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"575.81885"	"1150.63042"	"1150.63055"	"-0.12"	"-0.00007"	"10/56"	"10"	"56"	"6898395.10888672"	"HCD"	"MS2"	"0.2301918"	"283.4"	"100.000"	"99.7628"	"35496"	"35496"	"35482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"386.8"	""	"363.5"	""	"412.6"	""	"464.2"	""	"550.4"	"510.2"	""	"722"	"29"	"35.000"	"28.000"	"0.0408796531128036"	"24"	"0.003317"	"0.03592"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDFLER"	"[K].iEDFLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"575.81891"	"1150.63054"	"1150.63055"	"-0.01"	"-0.00001"	"9/56"	"9"	"56"	"476280.545532227"	"HCD"	"MS2"	"18.62653"	"26.8"	"100.000"	"100.0632"	"35590"	"35590"	"35572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"32.0"	""	"36.7"	""	"48.0"	""	"56.0"	"50.2"	""	"722"	"26"	"35.000"	"28.000"	"0.0852132642178188"	"28"	"0.002834"	"0.02977"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNIAYGLR"	"[K].dNIAYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"575.82410"	"1150.64092"	"1150.64179"	"-0.76"	"-0.00044"	"6/68"	"6"	"68"	"3570662.5458374"	"HCD"	"MS2"	"1.742462"	"194.8"	"100.000"	"53.5089"	"16779"	"16779"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.1"	""	"247.7"	""	"242.3"	""	"306.8"	"7.4"	"413.2"	"398.6"	""	"615"	"10"	"34.000"	"27.000"	"3.36391582628669"	"19"	"0.007443"	"0.09544"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFDNTGR"	"[K].vLFDNTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"575.82416"	"1150.64104"	"1150.64179"	"-0.65"	"-0.00037"	"7/66"	"7"	"66"	"955321.780212402"	"HCD"	"MS2"	"16.08534"	"59.5"	"100.000"	"59.2101"	"19060"	"19060"	"19038"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"71.0"	""	"78.5"	""	"105.9"	"0.9"	"116.7"	"118.5"	""	"615"	"23"	"34.000"	"27.000"	"0.150606986955797"	"19"	"0.0001991"	"0.00446"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFDNTGR"	"[K].vLFDNTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"575.82422"	"1150.64116"	"1150.64179"	"-0.55"	"-0.00031"	"7/66"	"7"	"66"	"1319846.68560791"	"HCD"	"MS2"	"22.12023"	"75.6"	"100.000"	"58.6805"	"18880"	"18880"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.2"	""	"88.5"	""	"102.9"	""	"121.9"	""	"149.1"	"148.7"	""	"615"	"22"	"34.000"	"27.000"	"0.173318579166481"	"20"	"0.0001991"	"0.003151"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDGTFLVR"	"[R].nDGTFLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566E5"	"Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Kdelc2 PE=2 SV=1"	"Q566E5"	"Protein O-glucosyltransferase 3 OS=Rattus norvegicus OX=10116 GN=Kdelc2 PE=2 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"575.82440"	"1150.64153"	"1150.64179"	"-0.23"	"-0.00013"	"6/74"	"6"	"74"	"1770762.67199707"	"HCD"	"MS2"	"43.0733"	"133.5"	"100.000"	"53.1957"	"16652"	"16652"	"16625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.1"	""	"166.5"	""	"170.4"	""	"215.6"	""	"278.8"	"272.8"	""	"631"	"9"	"34.000"	"28.000"	"4.26578893687795"	"21"	"0.009382"	"0.1227"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFDNTGR"	"[K].vLFDNTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"575.82446"	"1150.64165"	"1150.64179"	"-0.12"	"-0.00007"	"7/66"	"7"	"66"	"989729.139587402"	"HCD"	"MS2"	"14.65724"	"59.8"	"100.000"	"58.9889"	"19005"	"19005"	"18984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.7"	""	"74.5"	""	"79.7"	""	"96.8"	""	"113.5"	"123.7"	""	"631"	"23"	"34.000"	"28.000"	"0.150660485839001"	"19"	"0.0001991"	"0.003671"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNIAYGLR"	"[K].dNIAYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"P36372"	"Antigen peptide transporter 2 OS=Rattus norvegicus OX=10116 GN=Tap2 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"575.82465"	"1150.64202"	"1150.64179"	"0.20"	"0.00011"	"6/68"	"6"	"68"	"3443511.51544189"	"HCD"	"MS2"	"5.253016"	"186.7"	"100.000"	"53.7529"	"16845"	"16845"	"16825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.2"	""	"222.6"	""	"217.9"	""	"309.6"	"1.1"	"421.1"	"382.3"	""	"630"	"22"	"34.000"	"27.000"	"0.190682375547483"	"23"	"0.001615"	"0.01491"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLFDNTGR"	"[K].vLFDNTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"Q32Q06"	"AP-1 complex subunit mu-1 OS=Rattus norvegicus OX=10116 GN=Ap1m1 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"575.82489"	"1150.64250"	"1150.64179"	"0.62"	"0.00036"	"5/66"	"5"	"66"	"1213032.46759033"	"HCD"	"MS2"	"23.06087"	"72.1"	"100.000"	"58.8808"	"18926"	"18926"	"18901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.5"	""	"90.6"	""	"93.6"	""	"130.1"	""	"141.7"	"131.3"	""	"633"	"22"	"35.000"	"28.000"	"0.220990555890425"	"19"	"0.0001991"	"0.004115"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"576.31586"	"1151.62444"	"1151.62580"	"-1.19"	"-0.00068"	"11/66"	"11"	"66"	"6839573.48278809"	"HCD"	"MS2"	"0.9933079"	"325.1"	"100.000"	"53.5823"	"16809"	"16809"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"508.4"	""	"495.1"	""	"474.4"	""	"477.1"	""	"552.1"	"572.8"	""	"660"	"29"	"35.000"	"28.000"	"0.0427084627678495"	"17"	"0.0001991"	"0.002721"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETEFQR"	"[R].lETEFQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"576.31598"	"1151.62468"	"1151.62580"	"-0.97"	"-0.00056"	"5/54"	"5"	"54"	"1114754.91674805"	"HCD"	"MS2"	"29.00525"	"71.9"	"100.000"	"52.1779"	"16202"	"16202"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.0"	""	"88.8"	""	"91.1"	""	"134.2"	""	"153.2"	"137.1"	""	"657"	"20"	"35.000"	"28.000"	"0.331539573076191"	"27"	"0.00455"	"0.05299"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"576.31604"	"1151.62480"	"1151.62580"	"-0.87"	"-0.00050"	"7/66"	"7"	"66"	"1179622.63348389"	"HCD"	"MS2"	"29.08315"	"78.3"	"100.000"	"54.4681"	"17137"	"17137"	"17112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.5"	""	"106.5"	""	"118.0"	""	"119.8"	"0.8"	"134.4"	"127.7"	""	"670"	"20"	"35.000"	"28.000"	"0.355668011661573"	"21"	"0.0001991"	"0.002486"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"576.31610"	"1151.62493"	"1151.62580"	"-0.76"	"-0.00044"	"6/66"	"6"	"66"	"8476571.20697021"	"HCD"	"MS2"	"0.5153865"	"381.9"	"100.000"	"54.1554"	"17010"	"17010"	"16993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"656.7"	""	"568.8"	""	"623.8"	""	"514.3"	""	"614.3"	"633.2"	""	"670"	"34"	"35.000"	"28.000"	"0.0131536053358866"	"22"	"0.0001686"	"0.001838"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"576.31616"	"1151.62505"	"1151.62580"	"-0.66"	"-0.00038"	"11/66"	"11"	"66"	"5936481.32879639"	"HCD"	"MS2"	"1.648126"	"294.1"	"100.000"	"53.8676"	"16892"	"16892"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"472.7"	""	"432.1"	""	"435.7"	""	"400.3"	""	"513.3"	"534.9"	""	"670"	"30"	"35.000"	"28.000"	"0.0321399211557837"	"18"	"0.0001991"	"0.003672"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDFVVDR"	"[K].aTDFVVDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"576.31635"	"1151.62541"	"1151.62580"	"-0.34"	"-0.00020"	"6/66"	"6"	"66"	"7664560.01330566"	"HCD"	"MS2"	"2.01581"	"347.3"	"100.000"	"53.8746"	"16928"	"16928"	"16910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"571.6"	""	"545.6"	""	"557.4"	""	"449.7"	"0.3"	"553.3"	"605.2"	""	"686"	"33"	"35.000"	"28.000"	"0.01893625616733"	"22"	"0.0001991"	"0.003284"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPNWHR"	"[K].nVPNWHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"384.54669"	"1151.62552"	"1151.62714"	"-1.41"	"-0.00054"	"5/62"	"5"	"62"	"7924747.88616943"	"HCD"	"MS2"	"8.542917"	"137.6"	"100.000"	"32.8991"	"8421"	"8421"	"8404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.4"	""	"201.9"	""	"202.5"	""	"226.8"	""	"233.7"	"222.6"	""	"686"	"21"	"35.000"	"28.000"	"0.284638813257447"	"20"	"0.008893"	"0.1136"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVPNWHR"	"[K].nVPNWHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"384.54669"	"1151.62552"	"1151.62714"	"-1.41"	"-0.00054"	"6/62"	"6"	"62"	"10454831.3204346"	"HCD"	"MS2"	"5.564039"	"178.8"	"100.000"	"33.0331"	"8438"	"8438"	"8419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"284.6"	""	"259.2"	""	"271.8"	""	"305.4"	""	"289.8"	"280.9"	""	"686"	"31"	"35.000"	"28.000"	"0.0302896405843567"	"22"	"0.007522"	"0.09619"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDIDSGR"	"[K].lFDIDSGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"576.31659"	"1151.62590"	"1151.62580"	"0.09"	"0.00005"	"5/62"	"5"	"62"	"834206.565246582"	"HCD"	"MS2"	"25.62854"	"44.0"	"100.000"	"87.0461"	"30367"	"30367"	"30350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"48.1"	""	"54.7"	""	"89.0"	""	"82.5"	"97.6"	""	"685"	"25"	"35.000"	"28.000"	"0.0985508957046966"	"22"	"0.0001686"	"0.001952"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDIDSGR"	"[K].lFDIDSGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"576.31677"	"1151.62627"	"1151.62580"	"0.40"	"0.00023"	"5/62"	"5"	"62"	"824835.25958252"	"HCD"	"MS2"	"32.33421"	"42.8"	"100.000"	"87.1230"	"30364"	"30364"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.2"	""	"46.1"	""	"46.6"	""	"75.8"	""	"99.7"	"89.6"	""	"688"	"22"	"35.000"	"28.000"	"0.235265606664812"	"24"	"0.0001686"	"0.001695"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETEFQR"	"[R].lETEFQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"576.31689"	"1151.62651"	"1151.62580"	"0.62"	"0.00035"	"5/54"	"5"	"54"	"1142482.58270264"	"HCD"	"MS2"	"32.9335"	"76.1"	"100.000"	"51.8485"	"16102"	"16102"	"16075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.5"	""	"81.9"	""	"96.9"	""	"141.1"	""	"161.0"	"146.9"	""	"690"	"18"	"35.000"	"28.000"	"0.504451125187567"	"26"	"0.002834"	"0.0299"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"384.55023"	"1151.63614"	"1151.63704"	"-0.78"	"-0.00030"	"5/64"	"5"	"64"	"6068818.66516113"	"HCD"	"MS2"	"48.97201"	"223.8"	"100.000"	"31.2806"	"7730"	"7730"	"7706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"293.0"	""	"321.4"	""	"318.1"	""	"349.1"	""	"434.3"	"420.5"	""	"691"	"10"	"35.000"	"28.000"	"3.51113923386826"	"21"	"0.002711"	"0.02891"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIIHDPGR"	"[K].dIIHDPGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"384.55029"	"1151.63633"	"1151.63704"	"-0.62"	"-0.00024"	"7/64"	"7"	"64"	"4868975.66101074"	"HCD"	"MS2"	"46.73175"	"169.7"	"100.000"	"31.1222"	"7708"	"7708"	"7688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.3"	""	"253.3"	""	"239.5"	""	"251.3"	""	"331.7"	"309.1"	""	"691"	"10"	"35.000"	"28.000"	"3.79706517523936"	"20"	"0.00511"	"0.06443"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEASTK"	"[K].gTEASTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"576.33698"	"1151.66667"	"1151.66722"	"-0.48"	"-0.00028"	"6/56"	"6"	"56"	"789429.067871094"	"HCD"	"MS2"	"0"	"76.5"	"100.000"	"21.5031"	"3880"	"3880"	"3849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.9"	""	"97.3"	""	"96.0"	""	"129.5"	""	"150.0"	"141.3"	""	"530"	"29"	"34.000"	"27.000"	"0.0334384296666528"	""	"0.0001991"	"0.005245"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEASTK"	"[K].gTEASTk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"Q9JLH7"	"CDK5 regulatory subunit-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cdk5rap3 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"576.33698"	"1151.66667"	"1151.66722"	"-0.48"	"-0.00028"	"6/56"	"6"	"56"	"743966.055175781"	"HCD"	"MS2"	"0"	"72.7"	"100.000"	"21.4499"	"3895"	"3895"	"3873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.4"	""	"93.6"	""	"79.9"	""	"125.0"	""	"147.4"	"144.9"	""	"530"	"23"	"34.000"	"27.000"	"0.137798939081382"	"24"	"0.001488"	"0.01278"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTGDSK"	"[R].vSTGDSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q02759"	"Arachidonate 15-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox15 PE=1 SV=3"	"Q02759"	"Arachidonate 15-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox15 PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"576.33698"	"1151.66667"	"1151.66722"	"-0.48"	"-0.00028"	"5/56"	"5"	"56"	"996756.716308594"	"HCD"	"MS2"	"0"	"88.4"	"100.000"	"27.3598"	"6158"	"6158"	"6144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.9"	""	"76.3"	""	"88.0"	""	"109.4"	"0.7"	"307.5"	"159.3"	""	"530"	"17"	"34.000"	"27.000"	"0.484446557277827"	"22"	"0.002189"	"0.0207"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSGTSIK"	"[K].tSGTSIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"576.35565"	"1151.70403"	"1151.70361"	"0.36"	"0.00021"	"5/56"	"5"	"56"	"4530697.34912109"	"HCD"	"MS2"	"8.259592"	"339.6"	"100.000"	"31.2752"	"7766"	"7766"	"7744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"378.3"	""	"453.6"	""	"446.2"	""	"584.3"	"0.8"	"658.8"	"700.8"	""	"180"	"21"	"29.000"	"22.000"	"0.0687452205219921"	"21"	"0.004634"	"0.05454"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSGTSIK"	"[K].tSGTSIk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"P29418"	"ATP synthase subunit epsilon, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1e PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"576.35602"	"1151.70476"	"1151.70361"	"1.00"	"0.00058"	"5/56"	"5"	"56"	"4856863.96575928"	"HCD"	"MS2"	"5.149896"	"357.6"	"100.000"	"31.3961"	"7777"	"7777"	"7754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"403.6"	""	"495.6"	""	"481.8"	""	"634.5"	"2.3"	"683.7"	"690.6"	""	"180"	"15"	"29.000"	"22.000"	"0.319332050310218"	""	"0.00455"	"0.05392"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPFLR"	"[K].eDFPFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"576.81598"	"1152.62468"	"1152.62508"	"-0.34"	"-0.00020"	"5/50"	"5"	"50"	"2088913.64520264"	"HCD"	"MS2"	"2.766185"	"95.1"	"100.000"	"103.2591"	"36899"	"36899"	"36884"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.7"	""	"111.0"	""	"36.5"	""	"236.3"	"1.0"	"235.4"	"165.0"	""	"546"	"33"	"34.000"	"27.000"	"0.0143602713724663"	"24"	"0.0009352"	"0.008358"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPFLR"	"[K].eDFPFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"576.81610"	"1152.62493"	"1152.62508"	"-0.13"	"-0.00008"	"5/50"	"5"	"50"	"1733056.26177979"	"HCD"	"MS2"	"2.157889"	"87.0"	"100.000"	"103.0742"	"36811"	"36811"	"36794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.4"	""	"91.1"	""	"35.8"	""	"208.0"	""	"220.1"	"149.7"	""	"546"	"31"	"34.000"	"27.000"	"0.0201447854825244"	"21"	"0.001348"	"0.01069"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPFLR"	"[K].eDFPFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"576.81635"	"1152.62541"	"1152.62508"	"0.29"	"0.00017"	"5/50"	"5"	"50"	"2185856.63928223"	"HCD"	"MS2"	"38.49213"	"93.3"	"100.000"	"102.9687"	"36788"	"36788"	"36774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.2"	""	"115.7"	""	"36.6"	""	"241.6"	""	"224.9"	"142.4"	""	"569"	"23"	"34.000"	"27.000"	"0.131244849962428"	"20"	"0.002508"	"0.02341"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDFPFLR"	"[K].eDFPFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"576.81635"	"1152.62541"	"1152.62508"	"0.29"	"0.00017"	"9/50"	"9"	"50"	"2333637.20397949"	"HCD"	"MS2"	"34.23809"	"95.9"	"100.000"	"102.7629"	"36684"	"36684"	"36669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.8"	""	"123.3"	""	"38.3"	""	"245.0"	""	"228.7"	"161.7"	""	"569"	"25"	"34.000"	"27.000"	"0.0807387963591623"	"18"	"0.00212"	"0.01897"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTSQIVGR"	"[K].yTSQIVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"576.83130"	"1152.65532"	"1152.65744"	"-1.84"	"-0.00106"	"4/66"	"4"	"66"	"3188751.02825928"	"HCD"	"MS2"	"15.07018"	"201.7"	"100.000"	"41.2011"	"11749"	"11749"	"11732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.5"	""	"291.3"	""	"287.2"	""	"301.3"	""	"351.8"	"376.8"	""	"411"	"16"	"33.000"	"26.000"	"0.550569090750311"	"17"	"0.001316"	"0.01043"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTSQIVGR"	"[K].yTSQIVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"576.83142"	"1152.65557"	"1152.65744"	"-1.63"	"-0.00094"	"7/66"	"7"	"66"	"2985795.12536621"	"HCD"	"MS2"	"5.934114"	"169.4"	"100.000"	"40.8284"	"11633"	"11633"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"269.9"	""	"220.0"	""	"238.5"	""	"270.9"	""	"294.1"	"312.7"	""	"411"	"18"	"33.000"	"26.000"	"0.313914824967924"	"18"	"0.0003294"	"0.006202"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTSQIVGR"	"[K].yTSQIVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"576.83148"	"1152.65569"	"1152.65744"	"-1.52"	"-0.00088"	"7/66"	"7"	"66"	"2650251.49462891"	"HCD"	"MS2"	"12.06643"	"149.4"	"100.000"	"40.9122"	"11632"	"11632"	"11611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"215.2"	""	"196.9"	""	"223.3"	""	"247.1"	""	"261.1"	"272.1"	""	"411"	"18"	"33.000"	"26.000"	"0.317549787325144"	"18"	"0.0001991"	"0.005157"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTSQIVGR"	"[K].yTSQIVGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"576.83240"	"1152.65752"	"1152.65744"	"0.07"	"0.00004"	"12/66"	"12"	"66"	"2751523.20233154"	"HCD"	"MS2"	"17.40172"	"184.6"	"100.000"	"41.1356"	"11756"	"11756"	"11739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.0"	""	"259.0"	""	"278.3"	""	"254.9"	"0.9"	"333.0"	"334.4"	""	"418"	"12"	"33.000"	"26.000"	"1.18616822530386"	"14"	"0.001453"	"0.01195"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQAVHER"	"[R].lAQAVHER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"384.89401"	"1152.66748"	"1152.66867"	"-1.03"	"-0.00040"	"5/66"	"5"	"66"	"7460162.38409424"	"HCD"	"MS2"	"35.24936"	"384.3"	"100.000"	"25.8347"	"5566"	"5566"	"5542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.2"	""	"509.5"	""	"523.4"	""	"602.2"	""	"751.9"	"783.5"	""	"399"	"25"	"32.000"	"26.000"	"0.0666719104852098"	"24"	"0.002508"	"0.02333"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQAVHER"	"[R].lAQAVHER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"3"	"3"	"0.5357"	"0.0000"	"1"	"1"	"1"	"384.89423"	"1152.66812"	"1152.66867"	"-0.47"	"-0.00018"	"5/66"	"5"	"66"	"7407098.34246826"	"HCD"	"MS2"	"42.17569"	"430.9"	"100.000"	"25.6787"	"5542"	"5542"	"5518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"538.1"	""	"581.9"	""	"562.0"	""	"671.3"	""	"842.7"	"906.6"	""	"394"	"28"	"32.000"	"25.000"	"0.03269386207652"	""	"0.0001991"	"0.003407"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVLNPPR"	"[K].vEVLNPPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.85052"	"1152.69377"	"1152.69382"	"-0.04"	"-0.00003"	"5/62"	"5"	"62"	"491488.416381836"	"HCD"	"MS2"	"46.00404"	"35.7"	"100.000"	"55.4219"	"17526"	"17526"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.1"	""	"44.4"	""	"49.3"	""	"65.8"	""	"63.7"	"69.4"	""	"243"	"11"	"30.000"	"23.000"	"0.93234420957461"	"13"	"0.003317"	"0.03708"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"577.28943"	"1153.57158"	"1153.57271"	"-0.98"	"-0.00056"	"6/56"	"6"	"56"	"3096602.08966064"	"HCD"	"MS2"	"5.497164"	"50.5"	"100.000"	"75.2601"	"25572"	"25572"	"25553"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.6"	""	"46.2"	""	"64.9"	""	"86.7"	"4.0"	"108.4"	"101.5"	""	"446"	"34"	"33.000"	"26.000"	"0.00873584385950356"	"17"	"0.00455"	"0.0531"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28961"	"1153.57195"	"1153.57271"	"-0.66"	"-0.00038"	"6/56"	"6"	"56"	"4512710.65112305"	"HCD"	"MS2"	"1.596006"	"68.7"	"100.000"	"75.5702"	"25730"	"25730"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.7"	""	"60.1"	""	"88.1"	""	"120.8"	"4.3"	"145.2"	"154.9"	""	"452"	"31"	"33.000"	"26.000"	"0.0169086307115521"	"14"	"0.005871"	"0.07263"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28967"	"1153.57207"	"1153.57271"	"-0.55"	"-0.00032"	"4/56"	"4"	"56"	"731874.774963379"	"HCD"	"MS2"	"35.5941"	"27.1"	"100.000"	"75.8682"	"25819"	"25819"	"25801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.3"	""	"36.5"	""	"35.1"	""	"46.8"	"1.1"	"51.2"	"50.3"	""	"452"	"19"	"33.000"	"26.000"	"0.255922482091236"	"14"	"0.007379"	"0.09313"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.28998"	"1153.57268"	"1153.57271"	"-0.02"	"-0.00001"	"6/56"	"6"	"56"	"3696855.55773926"	"HCD"	"MS2"	"4.548137"	"59.2"	"100.000"	"75.5573"	"25694"	"25694"	"25677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.6"	""	"64.0"	""	"75.2"	""	"96.8"	"0.2"	"123.3"	"137.3"	""	"455"	"28"	"33.000"	"26.000"	"0.0335723236320266"	"14"	"0.005997"	"0.073"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HDELTYF"	"[K].hDELTYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.29004"	"1153.57280"	"1153.57271"	"0.08"	"0.00005"	"5/56"	"5"	"56"	"2117105.01617432"	"HCD"	"MS2"	"9.080564"	"41.9"	"100.000"	"75.2799"	"25611"	"25611"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.5"	""	"41.3"	""	"56.9"	""	"75.3"	""	"83.8"	"90.7"	""	"455"	"26"	"33.000"	"26.000"	"0.0543227066862748"	"14"	"0.008642"	"0.1099"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vMEYINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.31464"	"1153.62200"	"1153.62370"	"-1.47"	"-0.00085"	"5/50"	"5"	"50"	"849173.337890625"	"HCD"	"MS2"	"40.70929"	"57.3"	"100.000"	"65.3666"	"21559"	"21559"	"21535"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.0"	""	"79.1"	""	"77.8"	""	"68.7"	""	"113.7"	"121.1"	""	"525"	"19"	"34.000"	"27.000"	"0.305583082720254"	"14"	"0.007259"	"0.09209"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDMGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"577.31488"	"1153.62248"	"1153.62370"	"-1.05"	"-0.00061"	"6/56"	"6"	"56"	"3293535.78924561"	"HCD"	"MS2"	"22.24726"	"147.9"	"100.000"	"69.6859"	"23344"	"23344"	"23328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"267.4"	""	"257.7"	""	"236.4"	""	"141.6"	""	"229.5"	"267.0"	""	"541"	"24"	"34.000"	"27.000"	"0.108434447118185"	"19"	"0.0001991"	"0.004304"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMVQYLR"	"[R].dMVQYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"577.31506"	"1153.62285"	"1153.62370"	"-0.73"	"-0.00042"	"5/54"	"5"	"54"	"1423530.67938232"	"HCD"	"MS2"	"14.49732"	"75.5"	"100.000"	"72.0695"	"24276"	"24276"	"24259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"92.2"	""	"114.7"	""	"124.0"	"0.7"	"120.1"	"130.6"	""	"541"	"34"	"34.000"	"27.000"	"0.0120272757850394"	"22"	"0.001615"	"0.01471"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDMGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.31506"	"1153.62285"	"1153.62370"	"-0.73"	"-0.00042"	"6/56"	"6"	"56"	"5670566.59442139"	"HCD"	"MS2"	"4.839202"	"248.6"	"100.000"	"69.9467"	"23417"	"23417"	"23400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"419.9"	""	"423.1"	""	"408.6"	""	"225.0"	""	"415.0"	"463.2"	""	"541"	"32"	"34.000"	"27.000"	"0.0156374980823247"	"15"	"0.0001991"	"0.002544"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vMEYINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"577.31525"	"1153.62322"	"1153.62370"	"-0.42"	"-0.00024"	"5/50"	"5"	"50"	"794381.041931152"	"HCD"	"MS2"	"26.89761"	"52.9"	"100.000"	"65.3632"	"21591"	"21591"	"21568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.6"	""	"71.2"	""	"72.6"	""	"60.5"	"1.6"	"116.0"	"111.3"	""	"535"	"25"	"34.000"	"27.000"	"0.0796753144872309"	"19"	"0.001488"	"0.01234"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMVQYLR"	"[R].dMVQYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"577.31537"	"1153.62346"	"1153.62370"	"-0.20"	"-0.00012"	"5/54"	"5"	"54"	"1325670.74279785"	"HCD"	"MS2"	"6.36301"	"67.2"	"100.000"	"72.1650"	"24345"	"24345"	"24328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.2"	""	"83.1"	""	"105.8"	""	"102.2"	""	"110.8"	"119.9"	""	"540"	"38"	"34.000"	"27.000"	"0.0041818048710637"	"21"	"0.001103"	"0.009129"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vMEYINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"577.31543"	"1153.62358"	"1153.62370"	"-0.10"	"-0.00006"	"5/50"	"5"	"50"	"2018334.73760986"	"HCD"	"MS2"	"7.512316"	"104.3"	"100.000"	"65.6626"	"21713"	"21713"	"21696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.5"	""	"152.5"	""	"146.0"	""	"106.8"	""	"220.5"	"216.6"	""	"540"	"24"	"34.000"	"27.000"	"0.107241718356749"	"20"	"0.002035"	"0.01816"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDMGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"577.31543"	"1153.62358"	"1153.62370"	"-0.10"	"-0.00006"	"6/56"	"6"	"56"	"3756897.7177124"	"HCD"	"MS2"	"20.00015"	"170.5"	"100.000"	"69.6331"	"23289"	"23289"	"23267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"312.5"	""	"284.5"	""	"276.2"	""	"149.2"	""	"293.5"	"299.7"	""	"540"	"26"	"34.000"	"27.000"	"0.07200518394208"	"21"	"0.0001991"	"0.003744"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vMEYINR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"577.31555"	"1153.62383"	"1153.62370"	"0.11"	"0.00007"	"5/50"	"5"	"50"	"1980742.2477417"	"HCD"	"MS2"	"8.619099"	"107.3"	"100.000"	"65.6567"	"21677"	"21677"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.1"	""	"153.4"	""	"169.2"	""	"106.0"	""	"209.8"	"221.8"	""	"539"	"24"	"34.000"	"27.000"	"0.113125046185576"	"19"	"0.003317"	"0.03586"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDMGYR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.31555"	"1153.62383"	"1153.62370"	"0.11"	"0.00007"	"6/56"	"6"	"56"	"6461742.05792236"	"HCD"	"MS2"	"3.572666"	"175.9"	"100.000"	"69.9830"	"23466"	"23466"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"289.0"	""	"279.7"	""	"290.6"	""	"186.6"	"0.1"	"292.1"	"328.8"	""	"539"	"34"	"34.000"	"27.000"	"0.0113647207674003"	"15"	"0.0001991"	"0.002553"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMVQYLR"	"[R].dMVQYLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"577.31573"	"1153.62419"	"1153.62370"	"0.43"	"0.00025"	"5/54"	"5"	"54"	"639416.534729004"	"HCD"	"MS2"	"9.681029"	"40.7"	"100.000"	"71.8673"	"24229"	"24229"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.4"	""	"55.7"	""	"56.8"	""	"65.8"	"0.0"	"63.6"	"71.3"	""	"539"	"33"	"34.000"	"27.000"	"0.0127514264290119"	"17"	"0.0003938"	"0.006353"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSEGMK"	"[K].sGSEGMk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"577.31781"	"1153.62834"	"1153.62873"	"-0.33"	"-0.00019"	"6/54"	"6"	"54"	"2421801.21008301"	"HCD"	"MS2"	"25.71909"	"209.0"	"100.000"	"25.8003"	"5552"	"5552"	"5526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"340.0"	""	"287.3"	""	"290.3"	""	"231.0"	""	"422.6"	"413.1"	""	"534"	"22"	"34.000"	"27.000"	"0.165772032139427"	"20"	"0.001999"	"0.0174"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSEGMK"	"[K].sGSEGMk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"577.31812"	"1153.62895"	"1153.62873"	"0.19"	"0.00011"	"6/54"	"6"	"54"	"2441400.14935303"	"HCD"	"MS2"	"37.47513"	"209.9"	"100.000"	"25.6489"	"5530"	"5530"	"5502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"351.8"	""	"269.6"	""	"310.2"	""	"242.4"	"0.5"	"411.4"	"402.9"	""	"534"	"23"	"34.000"	"27.000"	"0.136304834993434"	"17"	"0.002559"	"0.02546"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGESSK"	"[K].sTGESSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"577.32721"	"1153.64714"	"1153.64649"	"0.57"	"0.00033"	"6/58"	"6"	"58"	"1629598.94348145"	"HCD"	"MS2"	"0"	"137.2"	"100.000"	"20.4134"	"3477"	"3477"	"3467"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.8"	""	"126.6"	""	"159.0"	""	"298.3"	""	"301.8"	"256.6"	""	"469"	"31"	"33.000"	"26.000"	"0.0200975374706522"	"22"	"0.0009352"	"0.008319"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGESSK"	"[K].sTGESSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"577.32727"	"1153.64726"	"1153.64649"	"0.67"	"0.00039"	"6/58"	"6"	"58"	"1834342.86431885"	"HCD"	"MS2"	"0"	"151.6"	"100.000"	"20.4441"	"3451"	"3451"	"3439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.0"	""	"140.7"	""	"174.3"	""	"336.5"	""	"324.0"	"282.3"	""	"469"	"31"	"33.000"	"26.000"	"0.0184987697581551"	"22"	"0.0005161"	"0.006649"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"385.22180"	"1153.65085"	"1153.65269"	"-1.59"	"-0.00061"	"5/62"	"5"	"62"	"2180399.30700684"	"HCD"	"MS2"	"0"	"70.9"	"100.000"	"38.7464"	"10755"	"10755"	"10734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.3"	""	"85.6"	""	"93.5"	""	"115.0"	""	"137.6"	"155.0"	""	"452"	"35"	"33.000"	"26.000"	"0.00771095980265558"	"25"	"0.0001991"	"0.003604"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"385.22183"	"1153.65094"	"1153.65269"	"-1.51"	"-0.00058"	"4/62"	"4"	"62"	"2848455.19329834"	"HCD"	"MS2"	"16.67317"	"85.9"	"100.000"	"38.0314"	"10499"	"10499"	"10471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.3"	""	"108.9"	""	"112.5"	""	"135.0"	"1.6"	"150.0"	"168.2"	""	"452"	"24"	"33.000"	"26.000"	"0.0835811686303402"	""	"0.001217"	"0.009395"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"1"	"385.22186"	"1153.65104"	"1153.65269"	"-1.43"	"-0.00055"	"5/62"	"5"	"62"	"3789943.09820557"	"HCD"	"MS2"	"16.72735"	"103.1"	"100.000"	"38.1512"	"10512"	"10512"	"10486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.0"	""	"131.3"	""	"137.2"	""	"166.6"	"1.0"	"156.5"	"208.8"	""	"452"	"28"	"33.000"	"26.000"	"0.0355720127369365"	""	"0.0003938"	"0.006299"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6341"	"0.0000"	"1"	"1"	"1"	"385.22192"	"1153.65122"	"1153.65269"	"-1.27"	"-0.00049"	"7/62"	"7"	"62"	"31566002.654541"	"HCD"	"MS2"	"2.796122"	"176.0"	"25.206"	"38.3490"	"10629"	"10629"	"10612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.0"	""	"215.7"	""	"241.5"	""	"264.2"	"1.2"	"291.7"	"387.3"	""	"452"	"41"	"33.000"	"26.000"	"0.00200959452635896"	""	"0.0001686"	"0.001859"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"577.32928"	"1153.65129"	"1153.65269"	"-1.21"	"-0.00070"	"6/62"	"6"	"62"	"2566640.02996826"	"HCD"	"MS2"	"2.557491"	"142.4"	"100.000"	"38.3672"	"10636"	"10636"	"10612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.2"	""	"169.7"	""	"187.8"	""	"202.6"	"5.8"	"247.7"	"317.8"	""	"452"	"32"	"33.000"	"26.000"	"0.0140964072819027"	"23"	"0.0001991"	"0.002315"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"577.32947"	"1153.65166"	"1153.65269"	"-0.89"	"-0.00051"	"6/62"	"6"	"62"	"2180141.43835449"	"HCD"	"MS2"	"0"	"127.9"	"100.000"	"38.4914"	"10651"	"10651"	"10626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.6"	""	"153.5"	""	"162.7"	""	"176.6"	""	"237.7"	"289.2"	""	"448"	"34"	"33.000"	"26.000"	"0.00995974039130802"	"24"	"0.0001686"	"0.001355"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"385.22217"	"1153.65195"	"1153.65269"	"-0.64"	"-0.00025"	"9/62"	"9"	"62"	"1944805.60406494"	"HCD"	"MS2"	"12.02325"	"69.4"	"100.000"	"38.6682"	"10759"	"10759"	"10738"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.9"	""	"92.3"	""	"96.5"	""	"105.4"	"0.3"	"129.9"	"154.5"	""	"446"	"20"	"33.000"	"26.000"	"0.207159504251926"	"15"	"0.0005161"	"0.006865"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"385.22235"	"1153.65250"	"1153.65269"	"-0.16"	"-0.00006"	"6/62"	"6"	"62"	"35054749.7475586"	"HCD"	"MS2"	"2.031288"	"227.0"	"30.550"	"38.4317"	"10627"	"10627"	"10610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.0"	""	"266.0"	""	"296.1"	""	"353.9"	""	"348.9"	"541.5"	""	"457"	"55"	"33.000"	"26.000"	"6.51457674124644E-05"	""	"9.9E-05"	"0.0009331"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"385.22433"	"1153.65845"	"1153.67784"	"-16.81"	"-0.00646"	"4/58"	"4"	"58"	"526478.431518555"	"HCD"	"MS2"	"54.2288"	"21.8"	"100.000"	"55.1990"	"17469"	"17469"	"17442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.6"	""	"37.2"	""	"35.8"	""	"25.2"	""	"36.5"	"34.5"	""	"429"	"18"	"33.000"	"26.000"	"0.315811031771818"	"21"	"0.004819"	"0.05735"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"385.22440"	"1153.65863"	"1153.67784"	"-16.65"	"-0.00640"	"4/58"	"4"	"58"	"769119.947998047"	"HCD"	"MS2"	"12.10768"	"34.0"	"100.000"	"50.2595"	"15425"	"15425"	"15398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.6"	""	"51.9"	""	"55.9"	""	"36.0"	"1.8"	"70.5"	"52.3"	""	"429"	"17"	"33.000"	"26.000"	"0.419205813263822"	"21"	"0.006033"	"0.07326"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"385.22440"	"1153.65863"	"1153.67784"	"-16.65"	"-0.00640"	"4/58"	"4"	"58"	"2210122.05291748"	"HCD"	"MS2"	"27.82766"	"95.7"	"100.000"	"44.5221"	"13132"	"13132"	"13121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.3"	""	"176.2"	""	"176.0"	""	"71.5"	"2.1"	"170.3"	"153.4"	""	"429"	"23"	"33.000"	"26.000"	"0.119516343145899"	"25"	"0.00511"	"0.06469"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"385.22446"	"1153.65882"	"1153.67784"	"-16.49"	"-0.00634"	"4/58"	"4"	"58"	"645437.36706543"	"HCD"	"MS2"	"42.25598"	"32.2"	"100.000"	"52.5029"	"16369"	"16369"	"16342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"59.2"	""	"56.0"	""	"41.4"	"1.8"	"53.5"	"51.3"	""	"435"	"16"	"33.000"	"26.000"	"0.525362731491774"	"20"	"0.007069"	"0.08979"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"385.22449"	"1153.65891"	"1153.67784"	"-16.41"	"-0.00631"	"4/58"	"4"	"58"	"610891.778625488"	"HCD"	"MS2"	"38.48968"	"30.2"	"100.000"	"53.9873"	"16941"	"16941"	"16920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.7"	""	"47.2"	""	"51.6"	""	"32.7"	"1.2"	"59.1"	"45.8"	""	"435"	"14"	"33.000"	"26.000"	"0.797001724859038"	"19"	"0.006958"	"0.08789"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"385.22452"	"1153.65900"	"1153.67784"	"-16.33"	"-0.00628"	"4/58"	"4"	"58"	"475345.190185547"	"HCD"	"MS2"	"22.87128"	"19.3"	"100.000"	"60.0939"	"19420"	"19420"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"31.2"	""	"30.4"	""	"26.0"	""	"31.8"	"30.3"	""	"435"	"14"	"33.000"	"26.000"	"0.830728789077101"	"19"	"0.008289"	"0.1057"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"385.22452"	"1153.65900"	"1153.67784"	"-16.33"	"-0.00628"	"4/58"	"4"	"58"	"1080198.76171875"	"HCD"	"MS2"	"28.12262"	"42.3"	"100.000"	"47.4873"	"14297"	"14297"	"14273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"74.3"	""	"81.1"	""	"38.6"	"0.8"	"76.0"	"68.5"	""	"435"	"15"	"33.000"	"26.000"	"0.6200964731821"	"20"	"0.007601"	"0.09686"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"385.22458"	"1153.65918"	"1153.67784"	"-16.17"	"-0.00622"	"4/58"	"4"	"58"	"538724.35357666"	"HCD"	"MS2"	"9.571275"	"22.0"	"100.000"	"55.5002"	"17558"	"17558"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"33.2"	""	"39.3"	""	"27.7"	"0.9"	"37.2"	"34.7"	""	"435"	"16"	"33.000"	"26.000"	"0.490297028643153"	"20"	"0.006613"	"0.08268"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"385.22458"	"1153.65918"	"1153.67784"	"-16.17"	"-0.00622"	"4/58"	"4"	"58"	"1075218.75915527"	"HCD"	"MS2"	"36.40528"	"49.6"	"100.000"	"46.3731"	"13883"	"13883"	"13866"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.0"	""	"82.4"	""	"84.0"	""	"60.6"	"0.1"	"85.2"	"89.2"	""	"435"	"22"	"33.000"	"26.000"	"0.133186210200138"	"25"	"0.005392"	"0.06841"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"385.22461"	"1153.65927"	"1153.67784"	"-16.09"	"-0.00619"	"4/58"	"4"	"58"	"784671.347290039"	"HCD"	"MS2"	"24.95203"	"36.4"	"100.000"	"49.1561"	"14976"	"14976"	"14952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"63.7"	""	"73.6"	""	"36.7"	""	"65.4"	"53.6"	""	"435"	"17"	"33.000"	"26.000"	"0.413484525883318"	"21"	"0.005266"	"0.06641"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"385.22470"	"1153.65955"	"1153.67784"	"-15.85"	"-0.00610"	"4/58"	"4"	"58"	"359542.594177246"	"HCD"	"MS2"	"67.21673"	"10.5"	"100.000"	"76.4216"	"26045"	"26045"	"26016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"18.8"	""	"20.5"	""	"13.0"	""	"16.7"	"17.4"	""	"418"	"17"	"33.000"	"26.000"	"0.394590191961125"	"20"	"0.004634"	"0.05431"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"385.22479"	"1153.65982"	"1153.67784"	"-15.62"	"-0.00601"	"4/58"	"4"	"58"	"484413.096130371"	"HCD"	"MS2"	"43.56096"	"18.6"	"100.000"	"59.7691"	"19288"	"19288"	"19258"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"37.5"	""	"32.3"	""	"19.5"	""	"30.0"	"31.5"	""	"419"	"16"	"33.000"	"26.000"	"0.487735118480819"	"20"	"0.004819"	"0.05753"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"385.22482"	"1153.65992"	"1153.67784"	"-15.54"	"-0.00597"	"4/58"	"4"	"58"	"542248.390319824"	"HCD"	"MS2"	"53.89473"	"19.9"	"100.000"	"58.8577"	"18952"	"18952"	"18929"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.3"	""	"36.4"	""	"32.6"	""	"20.4"	""	"34.8"	"37.2"	""	"419"	"14"	"33.000"	"26.000"	"0.841751748728529"	"18"	"0.009411"	"0.1238"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLSPTHEK"	"[K].LLSPTHEk.[H]"	"K8(TMT6plex)"	"1"	"1"	"Q3KR59"	"Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus OX=10116 GN=Usp10 PE=1 SV=1"	"Q3KR59"	"Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus OX=10116 GN=Usp10 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"385.22485"	"1153.66001"	"1153.67784"	"-15.46"	"-0.00594"	"3/64"	"3"	"64"	"284545.552062988"	"HCD"	"MS2"	"59.81038"	"14.6"	"100.000"	"60.7660"	"19726"	"19726"	"19700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"26.6"	""	"27.7"	""	"15.1"	""	"24.8"	"23.5"	""	"419"	"7"	"33.000"	"26.000"	"3.75996694821415"	"14"	"0.008792"	"0.1116"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"385.22485"	"1153.66001"	"1153.67784"	"-15.46"	"-0.00594"	"3/58"	"3"	"58"	"284545.552062988"	"HCD"	"MS2"	"59.81038"	"14.6"	"100.000"	"60.7660"	"19726"	"19726"	"19700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"26.6"	""	"27.7"	""	"15.1"	""	"24.8"	"23.5"	""	"419"	"7"	"33.000"	"26.000"	"3.75996694821415"	"14"	"0.008792"	"0.1116"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"385.22488"	"1153.66010"	"1153.67784"	"-15.38"	"-0.00591"	"4/58"	"4"	"58"	"377698.946228027"	"HCD"	"MS2"	"46.26871"	"12.5"	"100.000"	"79.2068"	"27172"	"27172"	"27144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"25.1"	""	"19.7"	""	"11.6"	""	"20.7"	"22.8"	""	"419"	"18"	"33.000"	"26.000"	"0.354147375179264"	"23"	"0.004959"	"0.06183"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"385.22498"	"1153.66037"	"1153.67784"	"-15.14"	"-0.00582"	"4/58"	"4"	"58"	"444361.449584961"	"HCD"	"MS2"	"57.12851"	"16.1"	"100.000"	"61.4383"	"19968"	"19968"	"19944"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"35.3"	""	"25.6"	""	"19.6"	""	"23.9"	"22.3"	""	"419"	"16"	"33.000"	"26.000"	"0.569094026821788"	"19"	"0.004213"	"0.04672"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLSPTHEK"	"[K].LLSPTHEk.[H]"	"K8(TMT6plex)"	"1"	"1"	"Q3KR59"	"Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus OX=10116 GN=Usp10 PE=1 SV=1"	"Q3KR59"	"Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus OX=10116 GN=Usp10 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"385.22501"	"1153.66047"	"1153.67784"	"-15.06"	"-0.00579"	"3/64"	"3"	"64"	"451093.163757324"	"HCD"	"MS2"	"57.90932"	"19.0"	"100.000"	"60.9527"	"19770"	"19770"	"19741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"38.3"	""	"31.1"	""	"25.0"	""	"32.2"	"27.9"	""	"419"	"8"	"33.000"	"26.000"	"3.68284997124346"	"15"	"0.009781"	"0.1307"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VVEALHQK"	"[R].VVEALHqk.[N]"	"Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"Q7TNL4"	"Serine/threonine-protein kinase 40 OS=Rattus norvegicus OX=10116 GN=Stk40 PE=2 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"385.22501"	"1153.66047"	"1153.67784"	"-15.06"	"-0.00579"	"3/58"	"3"	"58"	"451093.163757324"	"HCD"	"MS2"	"57.90932"	"19.0"	"100.000"	"60.9527"	"19770"	"19770"	"19741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"38.3"	""	"31.1"	""	"25.0"	""	"32.2"	"27.9"	""	"419"	"8"	"33.000"	"26.000"	"3.68284997124346"	"15"	"0.009781"	"0.1307"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADIAHR"	"[K].eLADIAHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"385.22769"	"1153.66852"	"1153.65269"	"13.73"	"0.00528"	"4/62"	"4"	"62"	"2621250.35302734"	"HCD"	"MS2"	"73.18185"	"100.5"	"100.000"	"38.1213"	"10500"	"10500"	"10471"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.7"	""	"138.1"	""	"150.3"	""	"155.7"	"2.9"	"164.2"	"193.4"	""	"390"	"25"	"32.000"	"25.000"	"0.0622349881744648"	"23"	"0.002559"	"0.02542"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPPPEK"	"[R].aGPPPEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46892"	"Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1"	"P46892"	"Cyclin-dependent kinase 11B OS=Rattus norvegicus OX=10116 GN=Cdk11b PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"577.35211"	"1153.69695"	"1153.69813"	"-1.03"	"-0.00059"	"6/48"	"6"	"48"	"699043.73828125"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"30.6182"	"7471"	"7471"	"7459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.3"	""	"74.8"	""	"73.1"	""	"106.5"	""	"142.0"	"136.4"	""	"299"	"33"	"31.000"	"24.000"	"0.00694450336458011"	"18"	"0.002711"	"0.02858"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTISTLPPP"	"[K].vTISTLPPP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35443"	"1153.70159"	"1153.70299"	"-1.22"	"-0.00070"	"6/72"	"6"	"72"	"1132817.79553223"	"HCD"	"MS2"	"38.84902"	"22.9"	"100.000"	"103.2387"	"36873"	"36873"	"36853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"28.2"	""	"23.9"	""	"43.5"	"0.5"	"48.6"	"41.6"	""	"233"	"42"	"30.000"	"23.000"	"0.000802279925241082"	"15"	"9.9E-05"	"0.0004603"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTISTLPPP"	"[K].vTISTLPPP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35455"	"1153.70183"	"1153.70299"	"-1.01"	"-0.00058"	"6/72"	"6"	"72"	"982719.352600098"	"HCD"	"MS2"	"32.97163"	"19.9"	"100.000"	"103.4521"	"36976"	"36976"	"36957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.8"	""	"23.9"	""	"25.9"	""	"33.5"	""	"42.0"	"38.5"	""	"229"	"38"	"30.000"	"23.000"	"0.00174102692154371"	"15"	"0.0001686"	"0.00156"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTISTLPPP"	"[K].vTISTLPPP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35461"	"1153.70195"	"1153.70299"	"-0.90"	"-0.00052"	"6/72"	"6"	"72"	"1159092.90124512"	"HCD"	"MS2"	"13.26233"	"17.5"	"100.000"	"103.8215"	"37108"	"37108"	"37096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.6"	""	"21.6"	""	"18.1"	""	"31.7"	""	"34.1"	"36.4"	""	"229"	"46"	"30.000"	"23.000"	"0.000308891165014943"	"15"	"0"	"0.0003799"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTISTLPPP"	"[K].vTISTLPPP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35480"	"1153.70232"	"1153.70299"	"-0.58"	"-0.00034"	"6/72"	"6"	"72"	"2277500.4508667"	"HCD"	"MS2"	"3.64855"	"26.4"	"100.000"	"103.7660"	"37103"	"37103"	"37086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"33.6"	""	"39.1"	""	"37.7"	"0.1"	"45.7"	"55.7"	""	"223"	"42"	"30.000"	"23.000"	"0.000659591222105653"	"15"	"9.9E-05"	"0.0006935"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTISTLPPP"	"[K].vTISTLPPP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35486"	"1153.70244"	"1153.70299"	"-0.48"	"-0.00028"	"7/72"	"7"	"72"	"2406715.19976807"	"HCD"	"MS2"	"5.975362"	"26.2"	"100.000"	"103.5387"	"36995"	"36995"	"36978"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.0"	""	"29.8"	""	"37.2"	""	"44.5"	""	"54.1"	"52.8"	""	"253"	"58"	"31.000"	"24.000"	"2.04687124761848E-05"	"16"	"9.9E-05"	"0.0004901"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTISTLPPP"	"[K].vTISTLPPP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.35504"	"1153.70281"	"1153.70299"	"-0.16"	"-0.00009"	"6/72"	"6"	"72"	"1063877.48583984"	"HCD"	"MS2"	"14.16594"	"15.3"	"100.000"	"104.0501"	"37218"	"37218"	"37202"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.9"	""	"17.3"	""	"18.6"	""	"25.7"	""	"29.5"	"30.3"	""	"253"	"46"	"31.000"	"24.000"	"0.000338135310695909"	"15"	"0.0001686"	"0.001037"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"577.82745"	"1154.64763"	"1154.64794"	"-0.26"	"-0.00015"	"7/74"	"7"	"74"	"2077642.38586426"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"23.0602"	"4495"	"4495"	"4486"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.4"	""	"144.5"	""	"148.3"	""	"177.2"	""	"197.8"	"202.9"	""	"447"	"24"	"33.000"	"26.000"	"0.0855613301313098"	"19"	"0.0001991"	"0.003327"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"577.82751"	"1154.64775"	"1154.64794"	"-0.16"	"-0.00009"	"9/74"	"9"	"74"	"2334568.77246094"	"HCD"	"MS2"	"0"	"112.8"	"100.000"	"23.2471"	"4531"	"4531"	"4523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.0"	""	"147.6"	""	"163.9"	""	"185.3"	""	"200.5"	"224.1"	""	"447"	"25"	"33.000"	"26.000"	"0.0785737584580746"	"19"	"0.0001991"	"0.003265"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"577.82874"	"1154.65019"	"1154.64794"	"1.96"	"0.00113"	"5/74"	"5"	"74"	"583591.271606445"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"22.9741"	"4427"	"4427"	"4412"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"72.6"	""	"62.8"	""	"54.8"	""	"87.9"	"81.2"	""	"438"	"10"	"33.000"	"26.000"	"2.11565142498769"	"13"	"0.006958"	"0.08796"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVSQPQPGR"	"[K].gVSQPQPGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"577.82892"	"1154.65056"	"1154.64794"	"2.27"	"0.00131"	"6/74"	"6"	"74"	"608752.077880859"	"HCD"	"MS2"	"19.04592"	"42.3"	"100.000"	"22.7796"	"4394"	"4394"	"4380"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.4"	""	"61.7"	""	"62.2"	""	"69.9"	""	"77.6"	"75.4"	""	"438"	"18"	"33.000"	"26.000"	"0.315823261983946"	"16"	"0.0005161"	"0.006786"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"577.83972"	"1154.67217"	"1154.67309"	"-0.80"	"-0.00046"	"7/74"	"7"	"74"	"13444593.8037109"	"HCD"	"MS2"	"19.79168"	"471.3"	"100.000"	"42.1734"	"12140"	"12140"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"734.5"	""	"659.1"	""	"651.9"	""	"820.2"	"2.8"	"761.9"	"828.1"	""	"348"	"43"	"32.000"	"25.000"	"0.000868059008180421"	"22"	"0"	"0.0002966"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"577.84003"	"1154.67278"	"1154.67309"	"-0.27"	"-0.00016"	"7/74"	"7"	"74"	"13264874.6873779"	"HCD"	"MS2"	"16.37592"	"468.1"	"100.000"	"42.0349"	"12118"	"12118"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"733.1"	""	"664.4"	""	"649.3"	""	"769.1"	""	"768.4"	"844.6"	""	"370"	"43"	"32.000"	"25.000"	"0.000912371537316631"	"22"	"0"	"0.0002968"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"577.84100"	"1154.67473"	"1154.67309"	"1.42"	"0.00082"	"7/74"	"7"	"74"	"240198621.224609"	"HCD"	"MS2"	"0.09023906"	"321.0"	"3.946"	"42.3407"	"12243"	"12243"	"12226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"474.3"	""	"453.0"	""	"448.1"	""	"522.2"	""	"538.0"	"608.1"	""	"367"	"43"	"32.000"	"25.000"	"0.000886412901742983"	"23"	"9.9E-05"	"0.0008576"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"577.84155"	"1154.67583"	"1154.67309"	"2.37"	"0.00137"	"7/74"	"7"	"74"	"245163204.78418"	"HCD"	"MS2"	"0.08762702"	"394.2"	"5.009"	"42.4536"	"12255"	"12255"	"12240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"585.2"	""	"561.3"	""	"540.1"	""	"620.2"	""	"659.8"	"772.7"	""	"361"	"34"	"32.000"	"25.000"	"0.00804409528357495"	"24"	"0.0001991"	"0.003087"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"577.84320"	"1154.67912"	"1154.67309"	"5.23"	"0.00302"	"7/74"	"7"	"74"	"3312196.3069458"	"HCD"	"MS2"	"9.113102"	"219.8"	"100.000"	"42.9686"	"12499"	"12499"	"12475"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"257.0"	""	"257.7"	""	"286.4"	""	"347.4"	""	"463.0"	"478.5"	""	"332"	"27"	"32.000"	"25.000"	"0.03177664835535"	"18"	"0.0001991"	"0.003885"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"577.84338"	"1154.67949"	"1154.67309"	"5.54"	"0.00320"	"7/74"	"7"	"74"	"4337367.21563721"	"HCD"	"MS2"	"5.12863"	"256.9"	"100.000"	"43.0609"	"12502"	"12502"	"12489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.3"	""	"280.1"	""	"322.4"	""	"433.9"	""	"547.8"	"574.6"	""	"338"	"32"	"32.000"	"25.000"	"0.0102774815216103"	"21"	"0.0001991"	"0.003745"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"577.84351"	"1154.67974"	"1154.67309"	"5.76"	"0.00332"	"8/74"	"8"	"74"	"63941045.9458008"	"HCD"	"MS2"	"0.08556178"	"589.4"	"13.901"	"42.7572"	"12379"	"12379"	"12362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"594.5"	""	"546.9"	""	"673.1"	""	"1048.6"	"0.4"	"1338.0"	"1409.5"	""	"338"	"19"	"32.000"	"25.000"	"0.236530257514772"	"19"	"0.004819"	"0.05821"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLPADGPR"	"[K].tVLPADGPR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"577.84387"	"1154.68047"	"1154.67309"	"6.39"	"0.00369"	"8/74"	"8"	"74"	"45851044.3134766"	"HCD"	"MS2"	"0.1047746"	"612.1"	"19.920"	"42.6467"	"12368"	"12368"	"12351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"620.7"	""	"619.7"	""	"702.3"	""	"1071.7"	""	"1403.5"	"1412.2"	""	"335"	"19"	"32.000"	"25.000"	"0.221827207145106"	"21"	"0.004158"	"0.04507"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLAQLR"	"[R].ePVLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"577.85803"	"1154.70879"	"1154.70947"	"-0.59"	"-0.00034"	"7/60"	"7"	"60"	"977315.597900391"	"HCD"	"MS2"	"0"	"50.0"	"100.000"	"66.2528"	"21921"	"21921"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.9"	""	"56.7"	""	"61.4"	""	"84.1"	"0.9"	"111.8"	"100.1"	""	"205"	"26"	"30.000"	"23.000"	"0.0269602469169277"	"23"	"0.0001686"	"0.001364"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLAQLR"	"[R].ePVLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"577.85815"	"1154.70903"	"1154.70947"	"-0.38"	"-0.00022"	"6/60"	"6"	"60"	"1034515.38171387"	"HCD"	"MS2"	"0"	"50.4"	"100.000"	"66.2768"	"21964"	"21964"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"47.5"	""	"62.0"	""	"98.0"	"1.0"	"110.6"	"92.3"	""	"214"	"33"	"30.000"	"23.000"	"0.00494747692897208"	"20"	"0"	"0.0003459"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQELPLAR"	"[R].vQELPLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62725"	"Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus OX=10116 GN=Nfyc PE=2 SV=1"	"Q62725"	"Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus OX=10116 GN=Nfyc PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"577.85846"	"1154.70964"	"1154.70947"	"0.15"	"0.00008"	"6/68"	"6"	"68"	"769168.89855957"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"64.4962"	"21238"	"21238"	"21211"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"54.5"	""	"54.0"	""	"71.5"	""	"81.2"	"78.9"	""	"214"	"20"	"30.000"	"23.000"	"0.106019018103526"	"19"	"0.001348"	"0.01069"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQELPLAR"	"[R].vQELPLAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62725"	"Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus OX=10116 GN=Nfyc PE=2 SV=1"	"Q62725"	"Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus OX=10116 GN=Nfyc PE=2 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"577.85846"	"1154.70964"	"1154.70947"	"0.15"	"0.00008"	"6/68"	"6"	"68"	"804690.909729004"	"HCD"	"MS2"	"32.1785"	"44.8"	"100.000"	"64.4722"	"21194"	"21194"	"21176"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"51.0"	""	"59.6"	""	"83.7"	"3.3"	"83.9"	"86.1"	""	"214"	"23"	"30.000"	"23.000"	"0.0586656352465314"	""	"0.0001991"	"0.002191"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLAQLR"	"[R].ePVLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"577.85876"	"1154.71025"	"1154.70947"	"0.67"	"0.00039"	"11/60"	"11"	"60"	"663680.47265625"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"66.5552"	"22041"	"22041"	"22023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.1"	""	"38.4"	""	"45.7"	""	"64.0"	""	"86.9"	"78.5"	""	"215"	"21"	"30.000"	"23.000"	"0.0904499777268585"	"22"	"0.0001686"	"0.001689"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPELALR"	"[R].aRPELALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"385.57788"	"1154.71909"	"1154.72071"	"-1.40"	"-0.00054"	"5/68"	"5"	"68"	"1489121.52459717"	"HCD"	"MS2"	"0"	"70.4"	"100.000"	"35.3210"	"9365"	"9365"	"9347"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.9"	""	"94.0"	""	"111.4"	""	"112.9"	"0.2"	"124.4"	"115.0"	""	"178"	"22"	"29.000"	"22.000"	"0.0519266142803633"	"19"	"0.0008247"	"0.007612"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPELALR"	"[R].aRPELALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"385.57797"	"1154.71936"	"1154.72071"	"-1.16"	"-0.00045"	"5/68"	"5"	"68"	"1214703.08447266"	"HCD"	"MS2"	"0"	"69.4"	"100.000"	"35.2153"	"9360"	"9360"	"9337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.9"	""	"102.3"	""	"105.7"	""	"115.9"	"1.6"	"128.7"	"109.1"	""	"178"	"21"	"29.000"	"22.000"	"0.0710215271668499"	"19"	"0.001348"	"0.0114"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPELALR"	"[R].aRPELALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"385.57806"	"1154.71964"	"1154.72071"	"-0.93"	"-0.00036"	"5/68"	"5"	"68"	"1646023.01574707"	"HCD"	"MS2"	"11.86779"	"84.7"	"100.000"	"35.6170"	"9485"	"9485"	"9463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"101.0"	""	"117.4"	""	"141.1"	"1.1"	"154.9"	"141.0"	""	"178"	"29"	"29.000"	"22.000"	"0.0123705784177988"	"20"	"0.0009352"	"0.008314"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ARPELALR"	"[R].aRPELALR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"385.57864"	"1154.72138"	"1154.72071"	"0.58"	"0.00022"	"5/68"	"5"	"68"	"1522275.79864502"	"HCD"	"MS2"	"17.36166"	"79.0"	"100.000"	"35.5184"	"9482"	"9482"	"9464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.2"	""	"96.6"	""	"106.4"	""	"129.5"	""	"149.1"	"143.1"	""	"177"	"10"	"29.000"	"22.000"	"0.968151384150804"	"14"	"0.001951"	"0.01666"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAFEYQR"	"[R].lAFEYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLP0"	"Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dhtkd1 PE=2 SV=1"	"Q4KLP0"	"Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dhtkd1 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"578.32129"	"1155.63530"	"1155.63597"	"-0.58"	"-0.00034"	"5/50"	"5"	"50"	"911035.95324707"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"66.9178"	"22187"	"22187"	"22164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.0"	""	"67.6"	""	"77.4"	""	"73.9"	""	"89.2"	"98.1"	""	"434"	"10"	"33.000"	"26.000"	"2.24109225050223"	"17"	"0.004959"	"0.06311"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAFEYQR"	"[R].lAFEYQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLP0"	"Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dhtkd1 PE=2 SV=1"	"Q4KLP0"	"Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dhtkd1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"578.32153"	"1155.63579"	"1155.63597"	"-0.16"	"-0.00009"	"5/50"	"5"	"50"	"685532.868286133"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"66.7993"	"22171"	"22171"	"22152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"64.7"	""	"64.7"	""	"65.6"	""	"66.3"	"82.0"	""	"435"	"18"	"33.000"	"26.000"	"0.352743696175567"	"17"	"0.005871"	"0.07265"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDFSSGK"	"[K].gDFSSGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.32410"	"1155.64092"	"1155.64101"	"-0.08"	"-0.00005"	"6/54"	"6"	"54"	"2012943.5135498"	"HCD"	"MS2"	"0"	"185.9"	"100.000"	"37.0053"	"10046"	"10046"	"10020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"267.1"	""	"215.3"	"2.5"	"211.0"	""	"318.1"	""	"381.6"	"370.3"	""	"459"	"13"	"33.000"	"26.000"	"1.18790767932655"	"13"	"0.00394"	"0.04332"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDFSSGK"	"[K].gDFSSGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.32440"	"1155.64153"	"1155.64101"	"0.45"	"0.00026"	"6/54"	"6"	"54"	"1609138.5980835"	"HCD"	"MS2"	"0"	"150.4"	"100.000"	"36.9691"	"10069"	"10069"	"10042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.0"	""	"192.1"	""	"188.5"	""	"216.1"	""	"312.5"	"296.9"	""	"462"	"5"	"33.000"	"26.000"	"8.1585312221942"	"13"	"0.006033"	"0.0733"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALATNPALR"	"[R].aLATNPALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.35516"	"1155.70305"	"1155.70472"	"-1.45"	"-0.00084"	"8/72"	"8"	"72"	"1517559.36376953"	"HCD"	"MS2"	"46.51906"	"102.0"	"100.000"	"44.7076"	"13173"	"13173"	"13156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.7"	""	"124.8"	""	"143.0"	""	"179.7"	"0.6"	"196.4"	"195.3"	""	"268"	"18"	"31.000"	"24.000"	"0.234479456275704"	"14"	"0.0001991"	"0.003543"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALATNPALR"	"[R].aLATNPALR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.35535"	"1155.70342"	"1155.70472"	"-1.13"	"-0.00065"	"6/72"	"6"	"72"	"1667858.73712158"	"HCD"	"MS2"	"36.94467"	"109.7"	"100.000"	"44.4808"	"13116"	"13116"	"13100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.5"	""	"138.9"	""	"146.3"	""	"193.1"	"1.2"	"212.9"	"212.7"	""	"268"	"29"	"31.000"	"24.000"	"0.0162594105962307"	"14"	"9.9E-05"	"0.001006"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGSVVK"	"[R].aHGSVVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"385.91275"	"1155.72370"	"1155.72501"	"-1.14"	"-0.00044"	"10/48"	"10"	"48"	"4020965.72491455"	"HCD"	"MS2"	"35.739"	"262.3"	"100.000"	"21.4086"	"3878"	"3878"	"3857"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.1"	""	"362.9"	""	"354.2"	""	"413.9"	""	"496.7"	"537.8"	""	"185"	"20"	"29.000"	"22.000"	"0.0920750011050162"	"14"	"0.0001991"	"0.004458"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGSVVK"	"[R].aHGSVVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"385.91290"	"1155.72416"	"1155.72501"	"-0.74"	"-0.00029"	"8/48"	"8"	"48"	"3186852.46453857"	"HCD"	"MS2"	"34.61138"	"215.9"	"100.000"	"21.4894"	"3874"	"3874"	"3849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.2"	""	"293.1"	""	"294.7"	""	"359.4"	""	"409.5"	"436.1"	""	"181"	"17"	"29.000"	"22.000"	"0.168907362020538"	"14"	"0.001488"	"0.0125"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"578.82916"	"1156.65105"	"1156.65235"	"-1.13"	"-0.00065"	"7/72"	"7"	"72"	"5252927.82440186"	"HCD"	"MS2"	"0"	"202.4"	"100.000"	"37.3682"	"10194"	"10194"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.1"	""	"268.7"	""	"265.2"	""	"299.2"	""	"373.8"	"408.4"	""	"439"	"44"	"33.000"	"26.000"	"0.000929896310478742"	"21"	"0"	"0.0002861"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"578.82947"	"1156.65166"	"1156.65235"	"-0.60"	"-0.00035"	"7/72"	"7"	"72"	"3839396.41876221"	"HCD"	"MS2"	"0"	"162.9"	"100.000"	"37.2354"	"10177"	"10177"	"10158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.6"	""	"225.1"	""	"205.7"	""	"231.1"	""	"299.1"	"333.8"	""	"435"	"42"	"33.000"	"26.000"	"0.0012896125809615"	"20"	"0"	"0.0001526"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"578.82965"	"1156.65203"	"1156.65235"	"-0.28"	"-0.00016"	"7/72"	"7"	"72"	"5230366.13220215"	"HCD"	"MS2"	"0"	"202.4"	"100.000"	"37.5170"	"10290"	"10290"	"10276"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.1"	""	"265.9"	""	"275.0"	""	"300.2"	""	"344.0"	"438.6"	""	"449"	"43"	"33.000"	"26.000"	"0.00103327600769014"	"21"	"0"	"8.75E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLDPSAPR"	"[R].aTLDPSAPR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P33272; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"578.83002"	"1156.65276"	"1156.65235"	"0.35"	"0.00020"	"7/72"	"7"	"72"	"2284345.94329834"	"HCD"	"MS2"	"0"	"130.2"	"100.000"	"37.7077"	"10331"	"10331"	"10318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.2"	""	"176.6"	""	"180.6"	""	"197.0"	""	"237.9"	"269.2"	""	"446"	"42"	"33.000"	"26.000"	"0.00130708810686628"	"20"	"0"	"0.0002182"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGVGLALR"	"[K].eLGVGLALR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"578.86652"	"1156.72576"	"1156.72512"	"0.55"	"0.00032"	"14/64"	"14"	"64"	"1193064.63397217"	"HCD"	"MS2"	"11.014"	"54.6"	"100.000"	"91.4870"	"32156"	"32156"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.7"	""	"67.9"	""	"72.5"	""	"94.1"	""	"97.3"	"124.7"	""	"189"	"31"	"29.000"	"22.000"	"0.00723488793531138"	""	"0.001615"	"0.01479"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGVGLALR"	"[K].eLGVGLALR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"P55053"	"Fatty acid-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Fabp5 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"578.86658"	"1156.72588"	"1156.72512"	"0.65"	"0.00038"	"14/64"	"14"	"64"	"1330935.72009277"	"HCD"	"MS2"	"13.20774"	"58.3"	"100.000"	"91.6008"	"32166"	"32166"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.2"	""	"67.4"	""	"78.2"	""	"97.9"	"1.9"	"108.4"	"125.2"	""	"189"	"33"	"29.000"	"22.000"	"0.00449191788515951"	""	"0.001488"	"0.01235"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMDPSCSR"	"[R].sMDPScSR.[S]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.25085"	"1157.49443"	"1157.49507"	"-0.55"	"-0.00032"	"6/68"	"6"	"68"	"1449560.54797363"	"HCD"	"MS2"	"0"	"85.2"	"100.000"	"37.2097"	"10130"	"10130"	"10100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.1"	""	"120.2"	""	"112.5"	""	"115.0"	""	"166.1"	"179.7"	""	"111"	"20"	"27.000"	"20.000"	"0.0519150149151891"	"14"	"0.0001991"	"0.003214"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMDPSCSR"	"[R].sMDPScSR.[S]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"579.25104"	"1157.49480"	"1157.49507"	"-0.23"	"-0.00013"	"6/68"	"6"	"68"	"1581439.38269043"	"HCD"	"MS2"	"0"	"84.7"	"100.000"	"37.1436"	"10140"	"10140"	"10118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.1"	""	"112.6"	""	"101.7"	""	"115.4"	""	"179.0"	"187.2"	""	"112"	"19"	"27.000"	"20.000"	"0.0692130562728926"	"14"	"0.0001991"	"0.004077"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSYFDR"	"[K].qLSYFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"579.31030"	"1157.61333"	"1157.61524"	"-1.65"	"-0.00096"	"5/66"	"5"	"66"	"911968.128662109"	"HCD"	"MS2"	"7.590744"	"59.3"	"100.000"	"60.7177"	"19706"	"19706"	"19687"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"74.7"	""	"57.8"	""	"105.1"	""	"128.8"	"128.7"	""	"437"	"37"	"33.000"	"26.000"	"0.0045861836457174"	"23"	"0.0001991"	"0.005988"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSYFDR"	"[K].qLSYFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"579.31061"	"1157.61394"	"1157.61524"	"-1.12"	"-0.00065"	"5/66"	"5"	"66"	"725372.293457031"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"61.0815"	"19854"	"19854"	"19832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.1"	""	"57.4"	""	"53.3"	""	"80.5"	""	"105.8"	"120.5"	""	"437"	"33"	"33.000"	"26.000"	"0.011231853787076"	"20"	"0.001615"	"0.0148"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSYFDR"	"[K].qLSYFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"579.31097"	"1157.61467"	"1157.61524"	"-0.49"	"-0.00028"	"5/66"	"5"	"66"	"700624.371948242"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"61.1990"	"19870"	"19870"	"19849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"59.8"	""	"50.6"	""	"80.5"	"1.7"	"99.4"	"107.6"	""	"430"	"36"	"33.000"	"26.000"	"0.00497093929887753"	"20"	"0.0001991"	"0.004737"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSYFDR"	"[K].qLSYFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"579.31116"	"1157.61504"	"1157.61524"	"-0.17"	"-0.00010"	"5/66"	"5"	"66"	"1088099.43682861"	"HCD"	"MS2"	"0"	"71.0"	"100.000"	"60.8976"	"19747"	"19747"	"19725"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.5"	""	"84.1"	""	"77.9"	""	"121.2"	"0.7"	"156.9"	"156.9"	""	"430"	"30"	"33.000"	"26.000"	"0.0201575831489064"	"20"	"0.0001991"	"0.004432"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"HDGAFLIR"	"[R].hDGAFLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"386.55862"	"1157.66132"	"1157.66286"	"-1.33"	"-0.00051"	"7/56"	"7"	"56"	"3904531.20025635"	"HCD"	"MS2"	"44.20853"	"74.9"	"100.000"	"42.4328"	"12246"	"12246"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.1"	""	"79.3"	""	"92.3"	""	"152.4"	"5.9"	"141.2"	"146.4"	""	"553"	"43"	"34.000"	"27.000"	"0.00154417008844734"	"19"	"9.9E-05"	"0.0006429"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"IPRDGAFLIR"	"[R].IPRDGAFLIR.[K]"	""	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"386.55862"	"1157.66132"	"1157.67895"	"-15.23"	"-0.00588"	"7/86"	"7"	"86"	"3904531.20025635"	"HCD"	"MS2"	"44.20853"	"74.9"	"100.000"	"42.4328"	"12246"	"12246"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.1"	""	"79.3"	""	"92.3"	""	"152.4"	"5.9"	"141.2"	"146.4"	"NoQuanLabels"	"553"	"43"	"34.000"	"27.000"	"0.00154417008844734"	"19"	"0.009635"	"0.1281"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"HDGAFLIR"	"[R].hDGAFLIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"386.55878"	"1157.66178"	"1157.66286"	"-0.93"	"-0.00036"	"7/56"	"7"	"56"	"3937690.44281006"	"HCD"	"MS2"	"8.466359"	"76.2"	"100.000"	"42.3589"	"12250"	"12250"	"12226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.3"	""	"80.5"	""	"100.1"	""	"139.3"	"2.1"	"147.4"	"152.6"	""	"531"	"43"	"34.000"	"27.000"	"0.00146914453996778"	"18"	"0.0001686"	"0.001163"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDLVAQR"	"[R].nIDLVAQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"579.34515"	"1157.68303"	"1157.68399"	"-0.83"	"-0.00048"	"6/70"	"6"	"70"	"1497964.93530273"	"HCD"	"MS2"	"42.79237"	"90.0"	"100.000"	"53.9875"	"16974"	"16974"	"16958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.5"	""	"103.3"	""	"125.8"	""	"143.5"	"4.3"	"187.4"	"163.8"	""	"445"	"32"	"33.000"	"26.000"	"0.0142998017103037"	"19"	"9.9E-05"	"0.0009932"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIDLVAQR"	"[R].nIDLVAQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"Q9JHW5"	"Vesicle-associated membrane protein 7 OS=Rattus norvegicus OX=10116 GN=Vamp7 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"579.34564"	"1157.68401"	"1157.68399"	"0.02"	"0.00001"	"6/70"	"6"	"70"	"1130794.46148682"	"HCD"	"MS2"	"36.75574"	"77.3"	"100.000"	"54.4291"	"17121"	"17121"	"17098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.8"	""	"95.4"	""	"110.3"	""	"112.1"	"1.4"	"153.7"	"156.3"	""	"475"	"33"	"33.000"	"26.000"	"0.0126375711575864"	"19"	"0.0001991"	"0.00232"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPVLTR"	"[R].eTLPVLTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"579.35779"	"1157.70830"	"1157.70914"	"-0.73"	"-0.00042"	"6/68"	"6"	"68"	"1336587.44067383"	"HCD"	"MS2"	"11.90977"	"65.1"	"100.000"	"67.9817"	"22618"	"22618"	"22604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.8"	""	"84.0"	""	"111.8"	""	"109.6"	""	"101.8"	"99.3"	""	"394"	"40"	"32.000"	"25.000"	"0.00180080308569639"	"21"	"0.0001686"	"0.001264"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPVLTR"	"[R].eTLPVLTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"579.35809"	"1157.70891"	"1157.70914"	"-0.20"	"-0.00011"	"6/68"	"6"	"68"	"1496724.4420166"	"HCD"	"MS2"	"6.91504"	"71.7"	"100.000"	"67.9668"	"22644"	"22644"	"22626"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.5"	""	"94.3"	""	"119.0"	""	"109.4"	""	"116.6"	"123.1"	""	"459"	"44"	"33.000"	"26.000"	"0.000990336281319722"	"22"	"0.0001686"	"0.001183"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPSIPK"	"[K].sAPSIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"3"	"579.36859"	"1157.72991"	"1157.72943"	"0.41"	"0.00024"	"6/54"	"6"	"54"	"1921848.38983154"	"HCD"	"MS2"	"33.2066"	"110.6"	"100.000"	"46.3412"	"13870"	"13870"	"13855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.8"	""	"154.1"	""	"164.9"	""	"188.2"	"0.8"	"194.8"	"191.5"	""	"339"	"15"	"32.000"	"25.000"	"0.571701988176783"	"25"	"0.002166"	"0.0198"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPSIPK"	"[K].sAPSIPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"579.36884"	"1157.73039"	"1157.72943"	"0.83"	"0.00048"	"6/54"	"6"	"54"	"2037298.73095703"	"HCD"	"MS2"	"44.20491"	"121.5"	"100.000"	"46.6520"	"13959"	"13959"	"13947"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.4"	""	"179.5"	""	"188.2"	""	"205.7"	""	"218.0"	"217.5"	""	"339"	"15"	"32.000"	"25.000"	"0.574340844655948"	"16"	"0.008792"	"0.1119"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDAYR"	"[R].iEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"579.80225"	"1158.59722"	"1158.59925"	"-1.76"	"-0.00102"	"5/52"	"5"	"52"	"1481180.51794434"	"HCD"	"MS2"	"33.74708"	"89.4"	"100.000"	"52.9470"	"16516"	"16516"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.1"	""	"96.1"	""	"125.7"	""	"141.7"	"0.6"	"185.1"	"172.4"	""	"360"	"13"	"32.000"	"25.000"	"0.991453853529725"	"18"	"0.00307"	"0.03295"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEYDAYR"	"[R].lEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q6AY65"	"Arfaptin-2 OS=Rattus norvegicus OX=10116 GN=Arfip2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"579.80225"	"1158.59722"	"1158.59925"	"-1.76"	"-0.00102"	"5/52"	"5"	"52"	"1481180.51794434"	"HCD"	"MS2"	"33.74708"	"89.4"	"100.000"	"52.9470"	"16516"	"16516"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.1"	""	"96.1"	""	"125.7"	""	"141.7"	"0.6"	"185.1"	"172.4"	""	"360"	"13"	"32.000"	"25.000"	"0.991453853529725"	"18"	"0.00307"	"0.03295"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDAYR"	"[R].iEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"579.80286"	"1158.59844"	"1158.59925"	"-0.71"	"-0.00041"	"5/52"	"5"	"52"	"1636969.56842041"	"HCD"	"MS2"	"25.69643"	"101.4"	"100.000"	"52.6893"	"16445"	"16445"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.5"	""	"112.1"	""	"129.3"	""	"159.7"	""	"208.1"	"211.3"	""	"356"	"16"	"32.000"	"25.000"	"0.472519790031647"	"22"	"0.002628"	"0.0273"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEYDAYR"	"[R].lEYDAYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	""	""	"Q6AY65"	"Arfaptin-2 OS=Rattus norvegicus OX=10116 GN=Arfip2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"579.80286"	"1158.59844"	"1158.59925"	"-0.71"	"-0.00041"	"5/52"	"5"	"52"	"1636969.56842041"	"HCD"	"MS2"	"25.69643"	"101.4"	"100.000"	"52.6893"	"16445"	"16445"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.5"	""	"112.1"	""	"129.3"	""	"159.7"	""	"208.1"	"211.3"	""	"356"	"16"	"32.000"	"25.000"	"0.472519790031647"	"22"	"0.002628"	"0.0273"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTYEIR"	"[R].fTTYEIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"579.82098"	"1158.63469"	"1158.63564"	"-0.82"	"-0.00047"	"4/54"	"4"	"54"	"983303.885437012"	"HCD"	"MS2"	"22.27177"	"57.7"	"100.000"	"68.7927"	"22947"	"22947"	"22930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	""	"80.2"	""	"96.9"	""	"90.2"	""	"106.6"	"93.8"	""	"531"	"17"	"34.000"	"27.000"	"0.473221562757468"	"23"	"0.007412"	"0.0942"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYYDLTR"	"[K].vYYDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"579.82098"	"1158.63469"	"1158.63564"	"-0.82"	"-0.00047"	"9/52"	"9"	"52"	"4775757.31890869"	"HCD"	"MS2"	"0.8445711"	"234.3"	"100.000"	"67.3701"	"22402"	"22402"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"317.0"	""	"307.5"	""	"310.5"	""	"370.4"	""	"447.7"	"469.4"	""	"531"	"28"	"34.000"	"27.000"	"0.0406503721076579"	"23"	"0.002588"	"0.02644"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTYEIR"	"[R].fTTYEIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"579.82117"	"1158.63506"	"1158.63564"	"-0.50"	"-0.00029"	"4/54"	"4"	"54"	"863749.827697754"	"HCD"	"MS2"	"10.84709"	"47.8"	"100.000"	"68.8540"	"23006"	"23006"	"22985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.4"	""	"73.3"	""	"72.7"	""	"76.8"	"0.0"	"90.7"	"74.3"	""	"539"	"23"	"34.000"	"27.000"	"0.132604654866151"	"23"	"0.003208"	"0.0345"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTYEIR"	"[R].fTTYEIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"579.82123"	"1158.63518"	"1158.63564"	"-0.40"	"-0.00023"	"5/54"	"5"	"54"	"2105241.95800781"	"HCD"	"MS2"	"32.69172"	"112.3"	"100.000"	"68.2316"	"22752"	"22752"	"22730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.1"	""	"174.7"	""	"175.7"	""	"189.1"	""	"190.6"	"157.4"	""	"539"	"38"	"34.000"	"27.000"	"0.00441122052524794"	""	"0.001261"	"0.0102"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTYEIR"	"[R].fTTYEIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"579.82135"	"1158.63542"	"1158.63564"	"-0.19"	"-0.00011"	"5/54"	"5"	"54"	"4827362.02453613"	"HCD"	"MS2"	"2.053805"	"239.4"	"100.000"	"68.5314"	"22875"	"22875"	"22858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"363.7"	""	"383.2"	""	"394.9"	""	"366.4"	""	"408.6"	"349.6"	""	"536"	"38"	"34.000"	"27.000"	"0.00385598018972566"	""	"0.002328"	"0.022"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYYDLTR"	"[K].vYYDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"579.82141"	"1158.63555"	"1158.63564"	"-0.08"	"-0.00005"	"10/52"	"10"	"52"	"1717295.79205322"	"HCD"	"MS2"	"6.038113"	"91.4"	"100.000"	"67.0547"	"22274"	"22274"	"22258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.1"	""	"118.7"	""	"114.5"	""	"155.3"	"1.1"	"166.6"	"176.7"	""	"536"	"28"	"34.000"	"27.000"	"0.0475482780878564"	"22"	"0.002588"	"0.02644"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTYEIR"	"[R].fTTYEIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"579.82147"	"1158.63567"	"1158.63564"	"0.02"	"0.00001"	"5/54"	"5"	"54"	"2176288.78173828"	"HCD"	"MS2"	"30.72058"	"113.6"	"100.000"	"68.1890"	"22702"	"22702"	"22684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.4"	""	"178.4"	""	"196.9"	""	"172.5"	"0.2"	"177.7"	"170.4"	""	"536"	"42"	"34.000"	"27.000"	"0.00177474022992072"	""	"0.001261"	"0.009555"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYYDLTR"	"[K].vYYDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"579.82153"	"1158.63579"	"1158.63564"	"0.13"	"0.00007"	"9/52"	"9"	"52"	"1810717.35510254"	"HCD"	"MS2"	"0"	"98.1"	"100.000"	"67.0558"	"22243"	"22243"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.5"	""	"125.3"	""	"134.3"	""	"163.5"	""	"177.6"	"198.7"	""	"570"	"29"	"34.000"	"27.000"	"0.0343435243005962"	"22"	"0.00212"	"0.01891"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTYEIR"	"[R].fTTYEIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"579.82153"	"1158.63579"	"1158.63564"	"0.13"	"0.00007"	"5/54"	"5"	"54"	"4852723.05889893"	"HCD"	"MS2"	"0.4606085"	"232.4"	"100.000"	"68.4980"	"22829"	"22829"	"22812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"356.1"	""	"373.9"	""	"376.7"	""	"351.6"	"0.5"	"387.3"	"350.5"	""	"570"	"35"	"34.000"	"27.000"	"0.00899176317661769"	"26"	"0.002373"	"0.02241"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYYDLTR"	"[K].vYYDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"579.82220"	"1158.63713"	"1158.63564"	"1.29"	"0.00075"	"9/52"	"9"	"52"	"4958975.34375"	"HCD"	"MS2"	"0.7446967"	"248.4"	"100.000"	"67.3416"	"22360"	"22360"	"22343"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"349.8"	""	"306.3"	""	"342.2"	""	"396.2"	""	"460.8"	"501.7"	""	"556"	"27"	"34.000"	"27.000"	"0.057285511588906"	"23"	"0.00307"	"0.03431"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAQLETR"	"[R].vIAQLETR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"579.85541"	"1158.70354"	"1158.70439"	"-0.73"	"-0.00042"	"5/66"	"5"	"66"	"982878.999023438"	"HCD"	"MS2"	"33.27684"	"67.2"	"100.000"	"59.5204"	"19220"	"19220"	"19204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.8"	""	"77.6"	""	"70.9"	""	"121.4"	"1.8"	"133.4"	"134.6"	""	"573"	"36"	"34.000"	"27.000"	"0.00650316280064716"	"23"	"0.0001991"	"0.002559"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAQLETR"	"[R].vIAQLETR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"579.85541"	"1158.70354"	"1158.70439"	"-0.73"	"-0.00042"	"5/66"	"5"	"66"	"1454418.82427979"	"HCD"	"MS2"	"29.51242"	"93.2"	"100.000"	"59.7231"	"19269"	"19269"	"19244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.3"	""	"104.1"	""	"102.0"	""	"176.1"	"3.7"	"185.9"	"186.4"	""	"573"	"36"	"34.000"	"27.000"	"0.00650316280064716"	"24"	"0.0001991"	"0.002957"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVPTQAK"	"[R].gVPTQAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"579.86542"	"1158.72356"	"1158.72468"	"-0.97"	"-0.00056"	"6/52"	"6"	"52"	"2519724.85333252"	"HCD"	"MS2"	"4.532998"	"176.9"	"100.000"	"33.1545"	"8488"	"8488"	"8466"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"215.2"	""	"228.9"	""	"228.8"	""	"315.5"	""	"344.1"	"346.3"	""	"509"	"22"	"34.000"	"27.000"	"0.148486779037668"	"18"	"0.002834"	"0.02999"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQQSIAR"	"[K].dLQQSIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"580.33405"	"1159.66081"	"1159.66325"	"-2.10"	"-0.00122"	"5/74"	"5"	"74"	"2892387.79516602"	"HCD"	"MS2"	"0"	"185.9"	"100.000"	"39.1042"	"10937"	"10937"	"10922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.5"	""	"192.2"	""	"226.5"	""	"337.3"	"5.0"	"373.2"	"370.7"	""	"723"	"20"	"35.000"	"28.000"	"0.341278006777361"	""	"0.001348"	"0.01061"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLQQSIAR"	"[K].dLQQSIAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"580.33527"	"1159.66326"	"1159.66325"	"0.00"	"0.00000"	"7/74"	"7"	"74"	"2969409.85717773"	"HCD"	"MS2"	"0"	"178.6"	"100.000"	"39.2189"	"10948"	"10948"	"10932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.5"	""	"204.5"	""	"219.5"	""	"312.3"	"2.0"	"352.5"	"346.9"	""	"713"	"23"	"35.000"	"28.000"	"0.164838834128836"	""	"0.0001991"	"0.003977"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLELASR"	"[R].eLLELASR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"580.34747"	"1159.68767"	"1159.68840"	"-0.63"	"-0.00037"	"6/68"	"6"	"68"	"1255839.26324463"	"HCD"	"MS2"	"40.09312"	"69.2"	"100.000"	"87.5143"	"30556"	"30556"	"30539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.9"	""	"81.1"	""	"81.5"	""	"137.6"	""	"133.7"	"138.5"	""	"700"	"13"	"35.000"	"28.000"	"1.58514152966267"	"17"	"0.0005161"	"0.006942"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLELASR"	"[R].eLLELASR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.34747"	"1159.68767"	"1159.68840"	"-0.63"	"-0.00037"	"5/68"	"5"	"68"	"1169223.42346191"	"HCD"	"MS2"	"43.64184"	"67.5"	"100.000"	"87.5871"	"30550"	"30550"	"30533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.1"	""	"75.7"	""	"73.6"	""	"136.5"	""	"137.2"	"132.2"	""	"700"	"13"	"35.000"	"28.000"	"1.78676749991392"	"14"	"0.002588"	"0.02692"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLELASR"	"[R].eLLELASR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"580.34766"	"1159.68804"	"1159.68840"	"-0.32"	"-0.00018"	"6/68"	"6"	"68"	"1574573.63922119"	"HCD"	"MS2"	"27.04762"	"79.1"	"100.000"	"87.1207"	"30363"	"30363"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"101.1"	""	"104.0"	""	"145.4"	""	"158.8"	"145.8"	""	"706"	"24"	"35.000"	"28.000"	"0.129352463850685"	"22"	"0.0001991"	"0.003273"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLELASR"	"[R].eLLELASR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"580.34778"	"1159.68828"	"1159.68840"	"-0.11"	"-0.00006"	"6/68"	"6"	"68"	"1690790.13238525"	"HCD"	"MS2"	"34.79557"	"85.8"	"100.000"	"87.0854"	"30383"	"30383"	"30365"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.8"	""	"101.7"	""	"112.1"	""	"159.4"	"1.8"	"170.1"	"162.1"	""	"706"	"25"	"35.000"	"28.000"	"0.124100835506489"	"22"	"0.0001991"	"0.003447"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDDVVNTR"	"[K].iDDVVNTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"580.82678"	"1160.64629"	"1160.64727"	"-0.84"	"-0.00049"	"6/70"	"6"	"70"	"3297276.71594238"	"HCD"	"MS2"	"8.918191"	"178.2"	"100.000"	"50.9442"	"15738"	"15738"	"15718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"240.4"	""	"192.9"	""	"193.0"	""	"322.8"	"2.1"	"392.0"	"349.4"	""	"770"	"25"	"35.000"	"28.000"	"0.131057153034885"	"23"	"0.001348"	"0.01077"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDDVVNTR"	"[K].iDDVVNTR.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"580.82678"	"1160.64629"	"1160.64727"	"-0.84"	"-0.00049"	"6/70"	"6"	"70"	"3404885.44586182"	"HCD"	"MS2"	"17.17692"	"191.9"	"100.000"	"51.2895"	"15842"	"15842"	"15821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"257.1"	""	"206.5"	""	"211.8"	""	"356.1"	"6.2"	"409.3"	"375.8"	""	"770"	"28"	"35.000"	"28.000"	"0.0603199161991637"	"24"	"0.0009352"	"0.007974"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQNGTSGVR"	"[K].iQNGTSGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"580.83228"	"1160.65727"	"1160.65850"	"-1.06"	"-0.00061"	"8/80"	"8"	"80"	"761230.445617676"	"HCD"	"MS2"	"0"	"53.4"	"100.000"	"25.7199"	"5559"	"5559"	"5534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.1"	""	"64.6"	""	"75.9"	""	"80.6"	"3.3"	"91.0"	"96.2"	""	"855"	"34"	"36.000"	"29.000"	"0.0171765571637922"	"20"	"0"	"0.0002205"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAISEATR"	"[K].lAAISEATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"580.84430"	"1160.68132"	"1160.68365"	"-2.01"	"-0.00117"	"7/70"	"7"	"70"	"2153105.10644531"	"HCD"	"MS2"	"34.45441"	"151.5"	"100.000"	"55.8455"	"17729"	"17729"	"17716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.8"	""	"214.2"	""	"224.9"	""	"200.4"	"1.2"	"312.1"	"239.7"	""	"916"	"28"	"36.000"	"29.000"	"0.0753122249232439"	"22"	"0"	"0.0003132"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAISEATR"	"[K].lAAISEATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"580.84479"	"1160.68230"	"1160.68365"	"-1.17"	"-0.00068"	"7/70"	"7"	"70"	"2286812.99194336"	"HCD"	"MS2"	"27.19202"	"127.9"	"100.000"	"56.1524"	"17852"	"17852"	"17831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.3"	""	"186.8"	""	"188.7"	""	"163.9"	"0.4"	"227.0"	"258.2"	""	"829"	"43"	"36.000"	"29.000"	"0.0021454803184351"	"17"	"0"	"9.908E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVPLSATSR"	"[R].tVPLSATSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"580.84491"	"1160.68254"	"1160.68365"	"-0.96"	"-0.00056"	"6/78"	"6"	"78"	"4161685.9822998"	"HCD"	"MS2"	"42.16541"	"262.5"	"100.000"	"39.0103"	"10899"	"10899"	"10874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"325.2"	""	"299.5"	""	"310.7"	""	"456.4"	""	"559.4"	"543.7"	""	"829"	"23"	"36.000"	"29.000"	"0.206312021723769"	"21"	"0.00329"	"0.03494"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAISEATR"	"[K].lAAISEATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"580.84509"	"1160.68291"	"1160.68365"	"-0.64"	"-0.00037"	"7/70"	"7"	"70"	"2493281.59790039"	"HCD"	"MS2"	"48.34806"	"158.6"	"100.000"	"56.2135"	"17843"	"17843"	"17833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.0"	""	"223.1"	""	"235.2"	""	"205.8"	""	"330.2"	"283.0"	""	"842"	"33"	"36.000"	"29.000"	"0.0210514539225308"	"21"	"0.0001991"	"0.002394"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVPLSATSR"	"[R].tVPLSATSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"580.84515"	"1160.68303"	"1160.68365"	"-0.54"	"-0.00031"	"6/78"	"6"	"78"	"4490826.93395996"	"HCD"	"MS2"	"54.78037"	"292.8"	"100.000"	"39.0677"	"10887"	"10887"	"10857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.8"	""	"326.4"	""	"346.2"	""	"503.6"	"0.5"	"615.7"	"622.1"	""	"841"	"23"	"36.000"	"29.000"	"0.215162211844699"	"21"	"0.0001686"	"0.001604"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQAIK"	"[K].gGEQAIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"580.85541"	"1160.70354"	"1160.70394"	"-0.35"	"-0.00020"	"6/54"	"6"	"54"	"2127898.93060303"	"HCD"	"MS2"	"0"	"176.4"	"100.000"	"30.4271"	"7435"	"7435"	"7415"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.9"	""	"189.3"	""	"218.8"	""	"345.3"	""	"316.5"	"340.5"	""	"676"	"22"	"35.000"	"28.000"	"0.224862326796188"	"25"	"0.003317"	"0.03603"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQAIK"	"[K].gGEQAIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"P63036"	"DnaJ homolog subfamily A member 1 OS=Rattus norvegicus OX=10116 GN=Dnaja1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"580.85547"	"1160.70366"	"1160.70394"	"-0.24"	"-0.00014"	"4/54"	"4"	"54"	"2498797.92303467"	"HCD"	"MS2"	"0"	"196.2"	"100.000"	"30.5174"	"7431"	"7431"	"7409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"264.6"	""	"224.4"	""	"232.1"	""	"388.0"	""	"368.3"	"386.3"	""	"676"	"18"	"35.000"	"28.000"	"0.493079219973067"	"23"	"0.003317"	"0.03652"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTIGDHSR"	"[K].fTIGDHSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.4048"	"0.0000"	"1"	"1"	"1"	"387.87833"	"1161.62043"	"1161.62139"	"-0.83"	"-0.00032"	"7/66"	"7"	"66"	"10007994.4848633"	"HCD"	"MS2"	"10.39745"	"242.9"	"100.000"	"34.5250"	"9081"	"9081"	"9060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"349.3"	""	"300.1"	""	"315.4"	""	"397.4"	""	"465.4"	"483.6"	""	"864"	"42"	"36.000"	"29.000"	"0.0025614374021856"	""	"9.9E-05"	"0.0009962"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTIGDHSR"	"[K].fTIGDHSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.4082"	"0.0000"	"1"	"1"	"1"	"387.87839"	"1161.62061"	"1161.62139"	"-0.67"	"-0.00026"	"6/66"	"6"	"66"	"9167458.76013184"	"HCD"	"MS2"	"14.06107"	"202.2"	"100.000"	"34.6306"	"9088"	"9088"	"9060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.3"	""	"263.1"	""	"255.2"	""	"336.5"	""	"392.3"	"364.9"	""	"863"	"49"	"36.000"	"29.000"	"0.000590174988244609"	""	"0.0001991"	"0.00253"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTIGDHSR"	"[K].fTIGDHSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.4103"	"0.0000"	"1"	"1"	"1"	"387.87842"	"1161.62070"	"1161.62139"	"-0.59"	"-0.00023"	"6/66"	"6"	"66"	"4697337.22094727"	"HCD"	"MS2"	"4.621796"	"132.3"	"100.000"	"34.9129"	"9201"	"9201"	"9190"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.6"	""	"171.0"	""	"178.7"	""	"226.6"	""	"253.3"	"237.3"	""	"863"	"39"	"36.000"	"29.000"	"0.00532084735538274"	""	"0.0001991"	"0.00198"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTIGDHSR"	"[K].fTIGDHSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"387.87866"	"1161.62143"	"1161.62139"	"0.04"	"0.00002"	"7/66"	"7"	"66"	"4788074.63525391"	"HCD"	"MS2"	"0"	"133.1"	"100.000"	"34.7937"	"9190"	"9190"	"9179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.1"	""	"162.2"	""	"191.4"	""	"202.5"	"2.3"	"250.9"	"250.8"	""	"860"	"44"	"36.000"	"29.000"	"0.00165374466279502"	""	"0.0001991"	"0.001989"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEESR"	"[K].lLEGEESR.[IL]"	"N-Term(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"581.31885"	"1161.63042"	"1161.63128"	"-0.74"	"-0.00043"	"6/64"	"6"	"64"	"5593410.13769531"	"HCD"	"MS2"	"50.36376"	"295.5"	"100.000"	"41.3145"	"11791"	"11791"	"11774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"436.8"	""	"418.2"	""	"410.8"	""	"443.8"	""	"509.0"	"581.4"	""	"849"	"32"	"36.000"	"29.000"	"0.0254025722103106"	""	"0.001718"	"0.0152"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEGEESR"	"[K].lLEGEESR.[IL]"	"N-Term(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"581.31897"	"1161.63066"	"1161.63128"	"-0.53"	"-0.00031"	"6/64"	"6"	"64"	"3448983.95922852"	"HCD"	"MS2"	"20.08282"	"229.1"	"100.000"	"41.2998"	"11819"	"11819"	"11798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.1"	""	"316.1"	""	"298.6"	""	"359.4"	""	"401.2"	"450.8"	""	"893"	"31"	"36.000"	"29.000"	"0.0321974489455164"	""	"0.001316"	"0.01042"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALGSDGVR"	"[R].aSALGSDGVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"581.32434"	"1161.64141"	"1161.64252"	"-0.96"	"-0.00056"	"8/82"	"8"	"82"	"1674505.50561523"	"HCD"	"MS2"	"24.21979"	"117.0"	"100.000"	"33.8252"	"8761"	"8761"	"8739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.4"	""	"141.6"	""	"153.8"	""	"190.9"	"1.7"	"217.6"	"247.1"	""	"895"	"49"	"36.000"	"29.000"	"0.000632110551218682"	"21"	"0"	"0.0001482"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALGSDGVR"	"[R].aSALGSDGVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"581.32465"	"1161.64202"	"1161.64252"	"-0.43"	"-0.00025"	"7/82"	"7"	"82"	"987744.189880371"	"HCD"	"MS2"	"32.0568"	"88.5"	"100.000"	"33.7650"	"8775"	"8775"	"8745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.3"	""	"107.7"	""	"118.9"	""	"149.2"	""	"167.2"	"171.8"	""	"881"	"39"	"36.000"	"29.000"	"0.00540686981325279"	"20"	"0.0001686"	"0.001369"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPTGSITSR"	"[K].nPTGSITSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"P36370"	"Antigen peptide transporter 1 OS=Rattus norvegicus OX=10116 GN=Tap1 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"581.32471"	"1161.64214"	"1161.64252"	"-0.33"	"-0.00019"	"7/90"	"7"	"90"	"1120306.99926758"	"HCD"	"MS2"	"0"	"71.0"	"100.000"	"27.8522"	"6396"	"6396"	"6373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.0"	""	"54.5"	""	"72.7"	""	"140.2"	""	"175.1"	"151.8"	""	"881"	"27"	"36.000"	"29.000"	"0.0887045532064382"	"22"	"0.0001686"	"0.00142"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDDPAK"	"[R].gTDDPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"581.32904"	"1161.65080"	"1161.65157"	"-0.66"	"-0.00038"	"10/52"	"10"	"52"	"3738781.55029297"	"HCD"	"MS2"	"28.61029"	"270.6"	"100.000"	"25.4308"	"5441"	"5441"	"5416"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"474.5"	""	"404.2"	""	"344.4"	""	"327.6"	""	"551.7"	"463.9"	""	"911"	"30"	"36.000"	"29.000"	"0.0433000483510437"	"27"	"0.002189"	"0.02103"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDDPAK"	"[R].gTDDPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"581.32916"	"1161.65105"	"1161.65157"	"-0.45"	"-0.00026"	"10/52"	"10"	"52"	"3043012.18566895"	"HCD"	"MS2"	"15.19345"	"210.2"	"100.000"	"25.7545"	"5533"	"5533"	"5516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.7"	""	"314.7"	""	"309.6"	""	"237.6"	""	"420.1"	"389.1"	""	"910"	"21"	"36.000"	"29.000"	"0.369837884854665"	"21"	"0.003568"	"0.03933"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAANDK"	"[K].nAAANDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"581.33447"	"1161.66167"	"1161.66281"	"-0.98"	"-0.00057"	"6/60"	"6"	"60"	"5206844.17883301"	"HCD"	"MS2"	"0"	"401.5"	"100.000"	"21.1311"	"3765"	"3765"	"3739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"550.3"	""	"477.5"	""	"544.7"	""	"679.9"	""	"777.5"	"779.2"	""	"736"	"34"	"35.000"	"28.000"	"0.0160637826264381"	"24"	"0.002711"	"0.02856"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAAANDK"	"[K].nAAANDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"581.33459"	"1161.66191"	"1161.66281"	"-0.77"	"-0.00045"	"6/60"	"6"	"60"	"4851710.4642334"	"HCD"	"MS2"	"0"	"370.7"	"100.000"	"21.1592"	"3739"	"3739"	"3720"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"513.8"	""	"442.3"	""	"486.8"	""	"649.6"	""	"715.0"	"709.6"	""	"737"	"32"	"35.000"	"28.000"	"0.0226171298903227"	"24"	"0.002035"	"0.01826"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEIIDSR"	"[R].iSEIIDSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.5686"	"0.0000"	"1"	"1"	"1"	"581.33704"	"1161.66680"	"1161.66767"	"-0.75"	"-0.00044"	"6/66"	"6"	"66"	"613869.857910156"	"HCD"	"MS2"	"19.83226"	"31.7"	"100.000"	"75.7542"	"25805"	"25805"	"25777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.8"	""	"34.3"	""	"48.6"	""	"52.7"	""	"54.6"	"63.6"	""	"659"	"51"	"35.000"	"28.000"	"0.000286322461449837"	""	"9.9E-05"	"0.0004197"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEIIDSR"	"[R].iSEIIDSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"581.33728"	"1161.66728"	"1161.66767"	"-0.33"	"-0.00019"	"6/66"	"6"	"66"	"591903.625854492"	"HCD"	"MS2"	"25.21698"	"34.1"	"100.000"	"75.9950"	"25871"	"25871"	"25849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.1"	""	"41.1"	""	"42.9"	""	"57.2"	"1.5"	"70.1"	"62.1"	""	"696"	"32"	"35.000"	"28.000"	"0.0234735753638877"	"28"	"0.002628"	"0.02788"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEIIDSR"	"[R].iSEIIDSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"581.33734"	"1161.66741"	"1161.66767"	"-0.23"	"-0.00013"	"6/66"	"6"	"66"	"636151.437988281"	"HCD"	"MS2"	"38.22602"	"36.7"	"100.000"	"76.0812"	"25938"	"25938"	"25913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.0"	""	"41.4"	""	"38.8"	""	"75.6"	"0.5"	"72.1"	"70.6"	""	"696"	"32"	"35.000"	"28.000"	"0.0229921319906643"	"27"	"0.001261"	"0.009773"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEIIDSR"	"[R].iSEIIDSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"581.33752"	"1161.66777"	"1161.66767"	"0.09"	"0.00005"	"5/66"	"5"	"66"	"637794.886413574"	"HCD"	"MS2"	"25.76014"	"36.1"	"100.000"	"75.6746"	"25741"	"25741"	"25721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.5"	""	"41.1"	""	"48.7"	""	"61.8"	""	"75.0"	"69.7"	""	"696"	"35"	"35.000"	"28.000"	"0.01063112547399"	""	"0.0005161"	"0.00649"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASLAQSR"	"[R].vTASLAQSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"581.34302"	"1161.67876"	"1161.67890"	"-0.12"	"-0.00007"	"7/80"	"7"	"80"	"4798342.8527832"	"HCD"	"MS2"	"6.56506"	"266.4"	"100.000"	"37.7440"	"10381"	"10381"	"10362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"353.8"	""	"273.3"	""	"297.3"	""	"490.3"	"2.6"	"597.0"	"516.4"	""	"628"	"41"	"34.000"	"27.000"	"0.00224351846387711"	"24"	"9.9E-05"	"0.0004535"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASLAQSR"	"[R].vTASLAQSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"581.34332"	"1161.67937"	"1161.67890"	"0.40"	"0.00023"	"7/80"	"7"	"80"	"2364879.24432373"	"HCD"	"MS2"	"15.2872"	"154.2"	"100.000"	"37.9144"	"10415"	"10415"	"10394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.4"	"3.0"	"157.4"	""	"173.2"	""	"292.6"	""	"320.8"	"308.3"	""	"629"	"41"	"34.000"	"27.000"	"0.00272032410454956"	"20"	"9.9E-05"	"0.0004463"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASLAQSR"	"[R].vTASLAQSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"581.34412"	"1161.68096"	"1161.67890"	"1.77"	"0.00103"	"7/80"	"7"	"80"	"9680350.29040527"	"HCD"	"MS2"	"32.57217"	"542.9"	"100.000"	"37.6115"	"10293"	"10293"	"10273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"727.7"	""	"600.5"	""	"611.4"	""	"996.6"	""	"1139.7"	"1079.0"	""	"619"	"41"	"34.000"	"27.000"	"0.0022472979382618"	"24"	"9.9E-05"	"0.0008844"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASLAQSR"	"[R].vTASLAQSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"581.34430"	"1161.68132"	"1161.67890"	"2.08"	"0.00121"	"7/80"	"7"	"80"	"8721772.44073486"	"HCD"	"MS2"	"52.04668"	"612.2"	"93.062"	"37.4531"	"10264"	"10264"	"10258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"848.8"	""	"764.3"	""	"709.5"	""	"1072.5"	""	"1246.9"	"1171.5"	""	"588"	"23"	"34.000"	"27.000"	"0.137197857812401"	"23"	"0.0001686"	"0.001268"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVK"	"[K].tLAGDVk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVH4"	"AKT-interacting protein OS=Rattus norvegicus OX=10116 GN=Aktip PE=1 SV=1"	"Q5FVH4"	"AKT-interacting protein OS=Rattus norvegicus OX=10116 GN=Aktip PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"581.36456"	"1161.72185"	"1161.72434"	"-2.15"	"-0.00125"	"10/56"	"10"	"56"	"1374577.74578857"	"HCD"	"MS2"	"14.91807"	"116.2"	"100.000"	"45.1005"	"13367"	"13367"	"13344"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.1"	""	"131.5"	""	"141.2"	""	"202.8"	""	"232.3"	"245.7"	""	"334"	"12"	"32.000"	"25.000"	"1.09576259472585"	"18"	"0.007752"	"0.09872"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVK"	"[K].tLAGDVk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVH4"	"AKT-interacting protein OS=Rattus norvegicus OX=10116 GN=Aktip PE=1 SV=1"	"Q5FVH4"	"AKT-interacting protein OS=Rattus norvegicus OX=10116 GN=Aktip PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"3"	"581.36487"	"1161.72246"	"1161.72434"	"-1.62"	"-0.00094"	"10/56"	"10"	"56"	"1171826.40563965"	"HCD"	"MS2"	"19.47098"	"96.6"	"100.000"	"45.3547"	"13437"	"13437"	"13410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.8"	""	"120.0"	""	"113.7"	""	"171.1"	"1.0"	"196.4"	"184.7"	""	"310"	"9"	"31.000"	"24.000"	"1.82949698526018"	"18"	"0.009382"	"0.1226"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVAEK"	"[K].gTVVAEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"581.36517"	"1161.72307"	"1161.72434"	"-1.10"	"-0.00064"	"10/56"	"10"	"56"	"2890359.63146973"	"HCD"	"MS2"	"23.43944"	"240.7"	"100.000"	"36.1881"	"9717"	"9717"	"9701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"402.5"	""	"263.8"	""	"290.4"	""	"398.5"	""	"460.5"	"471.3"	""	"310"	"29"	"31.000"	"24.000"	"0.0175522056301511"	""	"0.001615"	"0.01419"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVEASK"	"[K].aVVEASk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"581.36517"	"1161.72307"	"1161.72434"	"-1.10"	"-0.00064"	"12/52"	"12"	"52"	"5574645.18640137"	"HCD"	"MS2"	"34.41966"	"473.1"	"100.000"	"37.3659"	"10193"	"10193"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"726.5"	""	"641.4"	""	"603.8"	""	"750.7"	""	"880.1"	"887.5"	""	"310"	"27"	"31.000"	"24.000"	"0.0289288852079374"	"19"	"0.004234"	"0.04816"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVAEK"	"[K].gTVVAEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"581.36530"	"1161.72331"	"1161.72434"	"-0.89"	"-0.00052"	"10/56"	"10"	"56"	"2854751.26782227"	"HCD"	"MS2"	"41.82334"	"240.0"	"100.000"	"36.0853"	"9713"	"9713"	"9692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.5"	""	"270.2"	""	"279.9"	""	"389.8"	""	"464.5"	"477.5"	""	"310"	"26"	"31.000"	"24.000"	"0.0351019867676924"	"24"	"0.001951"	"0.01627"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLGIK"	"[K].gESLGIk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"581.36536"	"1161.72344"	"1161.72434"	"-0.78"	"-0.00045"	"6/50"	"6"	"50"	"11786433.7860107"	"HCD"	"MS2"	"11.62899"	"690.5"	"80.034"	"51.7442"	"16060"	"16060"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"598.0"	""	"707.8"	""	"730.7"	""	"1329.0"	""	"1680.6"	"1545.4"	""	"311"	"31"	"31.000"	"24.000"	"0.0136373627687835"	""	"0.002525"	"0.02402"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASDGLK"	"[K].iASDGLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.1500"	"0.0000"	"1"	"1"	"1"	"581.36548"	"1161.72368"	"1161.72434"	"-0.57"	"-0.00033"	"5/50"	"5"	"50"	"7935324.16278076"	"HCD"	"MS2"	"7.308087"	"605.0"	"100.000"	"51.4473"	"15940"	"15940"	"15923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"701.0"	""	"759.2"	""	"786.1"	""	"1184.8"	""	"1265.6"	"1044.4"	""	"311"	"20"	"31.000"	"24.000"	"0.14084141943967"	""	"0.00329"	"0.03546"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASDGLK"	"[K].iASDGLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"3"	"581.36554"	"1161.72380"	"1161.72434"	"-0.47"	"-0.00027"	"5/50"	"5"	"50"	"5983708.48181152"	"HCD"	"MS2"	"13.58152"	"466.0"	"100.000"	"51.6723"	"15997"	"15997"	"15979"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"605.9"	""	"625.2"	""	"646.0"	""	"890.1"	"11.3"	"856.4"	"779.0"	""	"311"	"21"	"31.000"	"24.000"	"0.114744107785075"	""	"0.002711"	"0.02859"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLGIK"	"[K].gESLGIk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"387.91299"	"1161.72443"	"1161.72434"	"0.07"	"0.00003"	"5/50"	"5"	"50"	"763904.597412109"	"HCD"	"MS2"	"40.26746"	"47.6"	"100.000"	"51.5838"	"15995"	"15995"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.4"	""	"53.2"	""	"58.2"	""	"92.6"	""	"113.2"	"94.7"	""	"311"	"18"	"31.000"	"24.000"	"0.26346952796956"	""	"0.002166"	"0.01988"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVVEASK"	"[K].aVVEASk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"D4A1R8"	"Copine-1 OS=Rattus norvegicus OX=10116 GN=Cpne1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"581.36591"	"1161.72453"	"1161.72434"	"0.16"	"0.00010"	"6/52"	"6"	"52"	"3298723.3638916"	"HCD"	"MS2"	"23.52887"	"247.9"	"100.000"	"37.1714"	"10151"	"10151"	"10131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"381.4"	""	"309.2"	""	"330.7"	""	"419.8"	""	"435.3"	"472.7"	""	"311"	"38"	"31.000"	"24.000"	"0.00272728418036394"	"21"	"0.0001991"	"0.004272"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLGIK"	"[K].gESLGIk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"581.36597"	"1161.72466"	"1161.72434"	"0.27"	"0.00016"	"6/50"	"6"	"50"	"11876437.0756836"	"HCD"	"MS2"	"5.995106"	"811.0"	"97.069"	"51.9727"	"16118"	"16118"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"724.3"	""	"860.5"	""	"844.4"	""	"1659.9"	""	"1915.5"	"1725.2"	""	"308"	"31"	"31.000"	"24.000"	"0.0124028279944656"	""	"0.002035"	"0.01817"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GESLGIK"	"[K].gESLGIk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"387.91315"	"1161.72489"	"1161.72434"	"0.47"	"0.00018"	"5/50"	"5"	"50"	"678724.383789063"	"HCD"	"MS2"	"35.83838"	"41.8"	"100.000"	"51.9015"	"16089"	"16089"	"16069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.2"	""	"42.9"	""	"45.9"	""	"91.8"	"0.9"	"89.1"	"83.4"	""	"303"	"16"	"31.000"	"24.000"	"0.420157995854754"	""	"0.004819"	"0.05785"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"581.80750"	"1162.60771"	"1162.60877"	"-0.91"	"-0.00053"	"6/70"	"6"	"70"	"3771141.63079834"	"HCD"	"MS2"	"15.209"	"226.1"	"100.000"	"40.6259"	"11550"	"11550"	"11537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"383.9"	""	"320.7"	""	"327.1"	""	"288.6"	""	"416.4"	"404.4"	""	"726"	"39"	"35.000"	"28.000"	"0.00478527196095976"	"22"	"0.0001686"	"0.001817"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"581.80786"	"1162.60845"	"1162.60877"	"-0.28"	"-0.00016"	"6/70"	"6"	"70"	"4777725.46923828"	"HCD"	"MS2"	"8.679084"	"245.0"	"100.000"	"40.6778"	"11536"	"11536"	"11518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"417.2"	""	"334.2"	""	"359.2"	""	"285.9"	""	"453.4"	"471.5"	""	"714"	"39"	"35.000"	"28.000"	"0.00435179286816177"	"22"	"0.0001686"	"0.001741"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"581.80798"	"1162.60869"	"1162.60877"	"-0.07"	"-0.00004"	"6/70"	"6"	"70"	"3686999.81982422"	"HCD"	"MS2"	"18.44677"	"218.7"	"100.000"	"40.3525"	"11439"	"11439"	"11418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"349.3"	""	"299.3"	""	"324.9"	""	"269.3"	"0.0"	"398.8"	"429.7"	""	"715"	"35"	"35.000"	"28.000"	"0.0118379375930026"	"21"	"9.9E-05"	"0.000603"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLMPDGTSR"	"[K].gLMPDGTSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"581.80872"	"1162.61016"	"1162.60877"	"1.19"	"0.00069"	"6/70"	"6"	"70"	"2241577.71380615"	"HCD"	"MS2"	"26.48979"	"165.9"	"100.000"	"40.3837"	"11418"	"11418"	"11389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.2"	""	"219.3"	""	"228.5"	""	"229.5"	"0.1"	"313.8"	"339.2"	""	"736"	"34"	"35.000"	"28.000"	"0.0160268369516289"	"22"	"9.9E-05"	"0.0009092"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTDGSPTR"	"[R].lSTDGSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"P14272"	"Plasma kallikrein OS=Rattus norvegicus OX=10116 GN=Klkb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"581.81635"	"1162.62541"	"1162.62653"	"-0.96"	"-0.00056"	"8/76"	"8"	"76"	"1251815.06231689"	"HCD"	"MS2"	"9.438228"	"82.6"	"100.000"	"29.3752"	"6970"	"6970"	"6946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.3"	""	"125.3"	""	"98.0"	""	"147.9"	""	"148.4"	"144.5"	""	"762"	"31"	"35.000"	"28.000"	"0.0326531419032771"	"28"	"0.0001686"	"0.001947"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SISQQSGAR"	"[K].sISQQSGAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"581.82251"	"1162.63774"	"1162.63777"	"-0.02"	"-0.00001"	"6/84"	"6"	"84"	"529942.598449707"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"20.9384"	"3688"	"3688"	"3666"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"42.3"	""	"46.3"	""	"70.1"	""	"77.9"	"78.7"	""	"780"	"23"	"35.000"	"28.000"	"0.20752222111405"	"19"	"0.000885"	"0.007779"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGAGDAK"	"[K].aDGAGDAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"3"	"581.82623"	"1162.64519"	"1162.64682"	"-1.41"	"-0.00082"	"5/64"	"5"	"64"	"525542.619140625"	"HCD"	"MS2"	"40.75356"	"54.2"	"100.000"	"24.2702"	"4976"	"4976"	"4946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.5"	""	"62.8"	""	"75.5"	""	"74.7"	""	"113.6"	"113.0"	""	"754"	"16"	"35.000"	"28.000"	"1.0054057165246"	"25"	"0.007104"	"0.09054"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGAGDAK"	"[K].aDGAGDAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"P18437"	"Non-histone chromosomal protein HMG-17 OS=Rattus norvegicus OX=10116 GN=Hmgn2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"581.82642"	"1162.64556"	"1162.64682"	"-1.09"	"-0.00063"	"6/64"	"6"	"64"	"862208.95501709"	"HCD"	"MS2"	"26.07468"	"77.0"	"100.000"	"24.3214"	"4959"	"4959"	"4935"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.8"	""	"84.0"	""	"103.0"	""	"103.5"	""	"148.0"	"167.5"	""	"755"	"26"	"35.000"	"28.000"	"0.0972561236768472"	"27"	"0.008364"	"0.1067"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"581.84454"	"1162.68181"	"1162.68321"	"-1.20"	"-0.00070"	"10/64"	"10"	"64"	"8277745.03674316"	"HCD"	"MS2"	"14.92533"	"503.6"	"72.280"	"26.3415"	"5810"	"5810"	"5799"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"776.8"	""	"732.1"	""	"750.2"	""	"719.8"	""	"879.4"	"923.3"	""	"536"	"22"	"34.000"	"27.000"	"0.162231354434049"	"24"	"0.003818"	"0.04172"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"581.84460"	"1162.68193"	"1162.68321"	"-1.10"	"-0.00064"	"5/64"	"5"	"64"	"7625465.8604126"	"HCD"	"MS2"	"8.854687"	"604.0"	"100.000"	"26.5389"	"5850"	"5850"	"5838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"961.8"	""	"877.8"	""	"910.1"	""	"820.3"	""	"1060.8"	"1097.0"	""	"536"	"32"	"34.000"	"27.000"	"0.0184558815420266"	"22"	"0.002711"	"0.0289"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"581.84491"	"1162.68254"	"1162.68321"	"-0.57"	"-0.00033"	"5/64"	"5"	"64"	"1536393.39758301"	"HCD"	"MS2"	"0"	"143.9"	"100.000"	"26.6150"	"5908"	"5908"	"5900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.1"	""	"193.1"	""	"212.3"	""	"212.6"	""	"240.1"	"273.6"	""	"540"	"20"	"34.000"	"27.000"	"0.256072985091242"	"24"	"0.003357"	"0.0375"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADGTVK"	"[K].nADGTVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"581.84509"	"1162.68291"	"1162.68321"	"-0.26"	"-0.00015"	"8/64"	"8"	"64"	"1428220.76739502"	"HCD"	"MS2"	"0"	"127.8"	"100.000"	"26.8415"	"5960"	"5960"	"5952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.4"	""	"174.0"	""	"185.3"	""	"179.7"	""	"217.8"	"249.5"	""	"540"	"14"	"34.000"	"27.000"	"0.996239516139406"	"20"	"0.00329"	"0.03538"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGIVTTTR"	"[K].sVGIVTTTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"581.85272"	"1162.69817"	"1162.69930"	"-0.98"	"-0.00057"	"8/78"	"8"	"78"	"2385666.98730469"	"HCD"	"MS2"	"47.1385"	"181.5"	"100.000"	"41.4994"	"11866"	"11866"	"11850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.3"	""	"240.2"	""	"233.9"	""	"283.6"	""	"346.0"	"381.6"	""	"458"	"34"	"33.000"	"26.000"	"0.00884780377453818"	"25"	"0.0001991"	"0.00277"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVAQGTK"	"[R].tVAQGTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q08463"	"Frizzled-1 OS=Rattus norvegicus OX=10116 GN=Fzd1 PE=1 SV=1"	"Q08463"	"Frizzled-1 OS=Rattus norvegicus OX=10116 GN=Fzd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"581.86346"	"1162.71965"	"1162.71959"	"0.05"	"0.00003"	"6/64"	"6"	"64"	"1142825.58563232"	"HCD"	"MS2"	"26.72868"	"101.4"	"100.000"	"26.1259"	"5684"	"5684"	"5663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.1"	""	"107.6"	""	"115.6"	""	"181.7"	"4.2"	"215.5"	"220.7"	""	"256"	"26"	"31.000"	"24.000"	"0.0325994272330885"	"15"	"0.0007633"	"0.007434"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEVGDVR"	"[K].yPEVGDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"582.31586"	"1163.62444"	"1163.62580"	"-1.17"	"-0.00068"	"3/62"	"3"	"62"	"1732724.83734131"	"HCD"	"MS2"	"36.80987"	"108.6"	"100.000"	"48.0392"	"14560"	"14560"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.1"	""	"124.0"	""	"107.5"	""	"200.7"	""	"240.6"	"238.1"	""	"780"	"10"	"35.000"	"28.000"	"4.13108952819143"	"18"	"0.009239"	"0.1185"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLAGEFQR"	"[R].gGLAGEFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"582.32538"	"1163.64348"	"1163.63704"	"5.54"	"0.00322"	"7/66"	"7"	"66"	"1410477.19396973"	"HCD"	"MS2"	"12.081"	"112.7"	"100.000"	"47.4209"	"14307"	"14307"	"14287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.8"	""	"152.4"	""	"134.9"	""	"173.7"	""	"200.5"	"245.8"	""	"797"	"22"	"36.000"	"29.000"	"0.259076681601722"	"21"	"0.0001991"	"0.004257"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLAGEFQR"	"[R].gGLAGEFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"Q8VIJ5"	"Protein O-GlcNAcase OS=Rattus norvegicus OX=10116 GN=Oga PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"582.32587"	"1163.64446"	"1163.63704"	"6.38"	"0.00371"	"7/66"	"7"	"66"	"1654121.97259521"	"HCD"	"MS2"	"3.874592"	"132.5"	"100.000"	"47.6554"	"14365"	"14365"	"14345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.5"	""	"178.1"	""	"183.0"	""	"195.2"	""	"240.2"	"272.4"	""	"817"	"17"	"36.000"	"29.000"	"0.739932427835107"	"24"	"0.001453"	"0.0117"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFEELLR"	"[R].qFEELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"582.33417"	"1163.66106"	"1163.66219"	"-0.97"	"-0.00057"	"5/62"	"5"	"62"	"534804.556884766"	"HCD"	"MS2"	"40.5146"	"34.1"	"100.000"	"87.0562"	"30337"	"30337"	"30316"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"37.7"	""	"47.2"	""	"57.9"	""	"64.6"	"74.1"	""	"664"	"16"	"35.000"	"28.000"	"0.833946295261181"	"17"	"0.005266"	"0.06756"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFEELLR"	"[R].qFEELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"3"	"582.33417"	"1163.66106"	"1163.66219"	"-0.97"	"-0.00057"	"5/62"	"5"	"62"	"1154252.17169189"	"HCD"	"MS2"	"10.19852"	"62.5"	"100.000"	"87.2146"	"30435"	"30435"	"30419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.2"	""	"72.7"	""	"86.1"	""	"111.2"	""	"124.8"	"116.3"	""	"664"	"32"	"35.000"	"28.000"	"0.0208035803071215"	"19"	"0.001453"	"0.01181"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFEELR"	"[R].qLFEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"P12928"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"582.33423"	"1163.66118"	"1163.66219"	"-0.87"	"-0.00050"	"5/62"	"5"	"62"	"632171.983947754"	"HCD"	"MS2"	"55.60927"	"41.3"	"100.000"	"85.7936"	"29864"	"29864"	"29846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.6"	""	"49.1"	""	"56.6"	""	"70.7"	""	"78.1"	"72.1"	""	"660"	"18"	"35.000"	"28.000"	"0.499475211983948"	"21"	"0.002084"	"0.01872"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDVVEFR"	"[K].iGDVVEFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB81"	"NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus OX=10116 GN=Cyb5r1 PE=2 SV=1"	"Q5EB81"	"NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus OX=10116 GN=Cyb5r1 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"582.33453"	"1163.66179"	"1163.66219"	"-0.34"	"-0.00020"	"8/62"	"8"	"62"	"1691435.14880371"	"HCD"	"MS2"	"38.84315"	"54.9"	"100.000"	"91.1570"	"32023"	"32023"	"32003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.7"	""	"65.8"	""	"69.4"	""	"91.3"	""	"107.6"	"123.0"	""	"675"	"10"	"35.000"	"28.000"	"3.71769516970227"	"19"	"0.001162"	"0.009243"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFEELLR"	"[R].qFEELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"3"	"582.33459"	"1163.66191"	"1163.66219"	"-0.24"	"-0.00014"	"5/62"	"5"	"62"	"859295.213745117"	"HCD"	"MS2"	"7.996243"	"43.7"	"100.000"	"87.3698"	"30463"	"30463"	"30445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"50.7"	""	"63.7"	""	"67.8"	""	"88.7"	"90.8"	""	"675"	"34"	"35.000"	"28.000"	"0.0126262323541818"	"20"	"0.0009352"	"0.00799"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFEELLR"	"[R].qFEELLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"5"	"582.33466"	"1163.66203"	"1163.66219"	"-0.13"	"-0.00008"	"5/62"	"5"	"62"	"442484.319030762"	"HCD"	"MS2"	"59.1118"	"26.9"	"100.000"	"86.9938"	"30312"	"30312"	"30291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"23.2"	""	"45.5"	""	"50.3"	"0.8"	"50.7"	"46.4"	""	"670"	"13"	"35.000"	"28.000"	"1.73798013041202"	"18"	"0.00455"	"0.05335"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IGDVVEFR"	"[K].iGDVVEFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB81"	"NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus OX=10116 GN=Cyb5r1 PE=2 SV=1"	"Q5EB81"	"NADH-cytochrome b5 reductase 1 OS=Rattus norvegicus OX=10116 GN=Cyb5r1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"582.33502"	"1163.66277"	"1163.66219"	"0.50"	"0.00029"	"8/62"	"8"	"62"	"1743374.83325195"	"HCD"	"MS2"	"17.96938"	"61.4"	"100.000"	"91.2614"	"32028"	"32028"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.6"	""	"66.4"	""	"74.9"	""	"121.4"	"0.0"	"117.8"	"129.3"	""	"672"	"10"	"35.000"	"28.000"	"3.21617207955068"	"23"	"0.001162"	"0.009264"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAASVDK"	"[K].dAASVDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"Q3SWU3"	"Heterogeneous nuclear ribonucleoprotein D-like OS=Rattus norvegicus OX=10116 GN=Hnrnpdl PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"582.33655"	"1163.66582"	"1163.66722"	"-1.21"	"-0.00070"	"6/58"	"6"	"58"	"2180272.79840088"	"HCD"	"MS2"	"6.804679"	"180.3"	"100.000"	"31.5993"	"7897"	"7897"	"7876"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"267.3"	""	"163.4"	""	"173.2"	""	"361.7"	"1.8"	"392.5"	"352.8"	""	"603"	"35"	"34.000"	"27.000"	"0.0105023700483358"	"27"	"0.001951"	"0.01639"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"582.35504"	"1163.70281"	"1163.70361"	"-0.69"	"-0.00040"	"6/54"	"6"	"54"	"9211465.28259277"	"HCD"	"MS2"	"0"	"700.6"	"100.000"	"34.8695"	"9185"	"9185"	"9174"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1018.1"	""	"890.7"	""	"932.1"	""	"1215.9"	""	"1280.4"	"1308.0"	""	"376"	"33"	"32.000"	"25.000"	"0.00849489175424853"	""	"0.002588"	"0.02617"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.3158"	"0.0000"	"1"	"1"	"1"	"388.57248"	"1163.70288"	"1163.70361"	"-0.62"	"-0.00024"	"5/54"	"5"	"54"	"4113913.81890869"	"HCD"	"MS2"	"14.54244"	"226.1"	"100.000"	"34.9771"	"9264"	"9264"	"9252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.3"	""	"280.3"	""	"344.3"	""	"378.2"	"2.7"	"401.9"	"431.2"	""	"376"	"19"	"32.000"	"25.000"	"0.216849212470365"	""	"0.003904"	"0.04222"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"582.35510"	"1163.70293"	"1163.70361"	"-0.59"	"-0.00034"	"6/54"	"6"	"54"	"82739148.3212891"	"HCD"	"MS2"	"0"	"641.4"	"11.145"	"35.0571"	"9296"	"9296"	"9281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"847.7"	""	"752.2"	""	"876.9"	""	"1081.4"	""	"1237.7"	"1296.9"	""	"376"	"32"	"32.000"	"25.000"	"0.0105963879295279"	""	"0.006157"	"0.07488"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.3810"	"0.0000"	"1"	"1"	"1"	"388.57257"	"1163.70316"	"1163.70361"	"-0.39"	"-0.00015"	"8/54"	"8"	"54"	"3811366.38085938"	"HCD"	"MS2"	"23.11042"	"208.1"	"100.000"	"35.0802"	"9268"	"9268"	"9247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"272.6"	""	"248.4"	""	"339.7"	""	"340.5"	"2.6"	"382.6"	"385.0"	""	"376"	"21"	"32.000"	"25.000"	"0.16261396872983"	""	"0.004213"	"0.0466"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"582.35522"	"1163.70317"	"1163.70361"	"-0.38"	"-0.00022"	"5/54"	"5"	"54"	"12643659.2727051"	"HCD"	"MS2"	"0"	"880.2"	"100.000"	"34.7662"	"9180"	"9180"	"9166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1272.1"	""	"1137.6"	""	"1148.0"	""	"1509.8"	""	"1631.4"	"1648.5"	""	"376"	"28"	"32.000"	"25.000"	"0.0284549514706007"	""	"0.002559"	"0.0255"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"582.35529"	"1163.70329"	"1163.70361"	"-0.27"	"-0.00016"	"6/54"	"6"	"54"	"81499488.7543945"	"HCD"	"MS2"	"0"	"830.6"	"14.365"	"35.1630"	"9302"	"9302"	"9285"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1096.4"	""	"988.8"	""	"1136.9"	""	"1368.4"	""	"1600.4"	"1699.0"	""	"376"	"34"	"32.000"	"25.000"	"0.0076941004029242"	""	"0.004792"	"0.0566"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.0400"	"0.0000"	"1"	"1"	"1"	"582.35547"	"1163.70366"	"1163.70361"	"0.04"	"0.00003"	"10/54"	"10"	"54"	"2282768.69647217"	"HCD"	"MS2"	"0"	"185.1"	"100.000"	"35.7342"	"9533"	"9533"	"9517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.8"	""	"249.9"	""	"259.7"	""	"286.6"	"0.4"	"343.0"	"350.4"	""	"376"	"25"	"32.000"	"25.000"	"0.0545956259039316"	""	"0.007069"	"0.08885"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ALSASQK"	"[].aLSASqk.[]"	"N-Term(TMT6plex); Q6(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0400"	"2"	"2"	"2"	"582.35547"	"1163.70366"	"1163.70361"	"0.04"	"0.00003"	"6/54"	"6"	"54"	"2282768.69647217"	"HCD"	"MS2"	"0"	"185.1"	"100.000"	"35.7342"	"9533"	"9533"	"9517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.8"	""	"249.9"	""	"259.7"	""	"286.6"	"0.4"	"343.0"	"350.4"	""	"376"	"24"	"32.000"	"25.000"	"0.083976515324381"	""	"0.008792"	"0.1116"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSTGEK"	"[R].aLSTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"582.35571"	"1163.70415"	"1163.70361"	"0.46"	"0.00027"	"5/54"	"5"	"54"	"2066820.95800781"	"HCD"	"MS2"	"0"	"170.3"	"100.000"	"35.5646"	"9500"	"9500"	"9490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.0"	""	"227.4"	""	"237.4"	""	"275.9"	"2.8"	"314.8"	"319.5"	""	"369"	"28"	"32.000"	"25.000"	"0.0328092551152181"	""	"0.001453"	"0.01173"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.81348"	"1164.61968"	"1164.62105"	"-1.18"	"-0.00069"	"7/66"	"7"	"66"	"2075572.30761719"	"HCD"	"MS2"	"6.854641"	"128.5"	"100.000"	"40.0413"	"11278"	"11278"	"11257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.8"	""	"169.3"	""	"177.6"	""	"206.1"	""	"231.0"	"244.2"	""	"643"	"35"	"35.000"	"28.000"	"0.00953193291732075"	"15"	"9.9E-05"	"0.0006075"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"582.81348"	"1164.61968"	"1164.62105"	"-1.18"	"-0.00069"	"7/66"	"7"	"66"	"6549473.07666016"	"HCD"	"MS2"	"0"	"308.0"	"100.000"	"39.4426"	"11037"	"11037"	"11014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"562.6"	""	"397.1"	""	"446.6"	""	"504.2"	""	"497.8"	"506.3"	""	"643"	"33"	"35.000"	"28.000"	"0.0160022472820728"	"18"	"0.0001686"	"0.001303"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"582.81348"	"1164.61968"	"1164.62105"	"-1.18"	"-0.00069"	"8/66"	"8"	"66"	"37440635.5795898"	"HCD"	"MS2"	"4.695101"	"370.4"	"23.214"	"39.7222"	"11149"	"11149"	"11136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"684.4"	""	"485.9"	""	"568.5"	""	"593.7"	"0.6"	"566.3"	"599.5"	""	"643"	"35"	"35.000"	"28.000"	"0.0108938396198754"	"17"	"0.0001991"	"0.002217"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"582.81366"	"1164.62004"	"1164.62105"	"-0.87"	"-0.00051"	"7/66"	"7"	"66"	"5234035.57775879"	"HCD"	"MS2"	"0"	"271.0"	"100.000"	"39.3493"	"11035"	"11035"	"11014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"485.3"	""	"362.4"	""	"403.2"	""	"469.7"	""	"412.0"	"432.7"	""	"666"	"37"	"35.000"	"28.000"	"0.00599024014737885"	"24"	"9.9E-05"	"0.0004213"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.81372"	"1164.62016"	"1164.62105"	"-0.76"	"-0.00044"	"7/66"	"7"	"66"	"2352450.30999756"	"HCD"	"MS2"	"20.41505"	"148.7"	"100.000"	"39.9431"	"11272"	"11272"	"11254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.2"	""	"181.0"	""	"219.7"	""	"239.1"	""	"262.7"	"276.7"	""	"666"	"31"	"35.000"	"28.000"	"0.026634480691734"	"14"	"9.9E-05"	"0.0005332"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPLADSYR"	"[K].gGPLADSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"582.81372"	"1164.62016"	"1164.62105"	"-0.76"	"-0.00044"	"13/66"	"13"	"66"	"36731202.0925293"	"HCD"	"MS2"	"7.640172"	"407.6"	"26.536"	"39.6448"	"11152"	"11152"	"11141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"771.2"	"3.0"	"522.1"	""	"614.2"	""	"660.7"	""	"614.1"	"667.9"	""	"666"	"41"	"35.000"	"28.000"	"0.00288698304627486"	"19"	"9.9E-05"	"0.0007151"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"582.83173"	"1164.65618"	"1164.65744"	"-1.08"	"-0.00063"	"7/62"	"7"	"62"	"3613323.33996582"	"HCD"	"MS2"	"0"	"170.9"	"100.000"	"61.1345"	"19875"	"19875"	"19864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"362.7"	""	"214.1"	""	"242.4"	""	"231.3"	"1.4"	"282.5"	"280.4"	""	"700"	"27"	"35.000"	"28.000"	"0.0633969032416861"	""	"0.0001991"	"0.004785"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITPAYNR"	"[K].tITPAYNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"582.83185"	"1164.65642"	"1164.65744"	"-0.87"	"-0.00051"	"5/62"	"5"	"62"	"3089505.90063477"	"HCD"	"MS2"	"35.70623"	"211.0"	"100.000"	"36.6909"	"9955"	"9955"	"9936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.2"	""	"235.3"	""	"264.9"	""	"379.7"	""	"420.4"	"436.8"	""	"698"	"21"	"35.000"	"28.000"	"0.285644211059041"	"20"	"0.0005161"	"0.006743"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITPAYNR"	"[K].tITPAYNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"582.83185"	"1164.65642"	"1164.65744"	"-0.87"	"-0.00051"	"5/62"	"5"	"62"	"3532057.06707764"	"HCD"	"MS2"	"2.229779"	"196.8"	"100.000"	"36.9136"	"10008"	"10008"	"9993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.9"	""	"227.9"	""	"207.8"	""	"345.0"	""	"411.3"	"439.6"	""	"698"	"22"	"35.000"	"28.000"	"0.199446044198482"	"19"	"0.003786"	"0.04045"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"582.83215"	"1164.65703"	"1164.65744"	"-0.35"	"-0.00020"	"6/62"	"6"	"62"	"6142286.28442383"	"HCD"	"MS2"	"0"	"277.0"	"100.000"	"60.9987"	"19788"	"19788"	"19772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"624.9"	""	"379.1"	""	"403.8"	""	"361.6"	""	"414.9"	"431.8"	""	"716"	"31"	"35.000"	"28.000"	"0.0310372351521442"	"28"	"0.0001991"	"0.005219"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"582.83221"	"1164.65715"	"1164.65744"	"-0.25"	"-0.00014"	"7/62"	"7"	"62"	"5806944.38470459"	"HCD"	"MS2"	"0.4284452"	"262.5"	"100.000"	"60.8559"	"19762"	"19762"	"19744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"573.2"	"3.5"	"359.6"	""	"383.6"	""	"325.0"	""	"404.3"	"430.7"	""	"716"	"28"	"35.000"	"28.000"	"0.0554476349570668"	"28"	"0.0009352"	"0.008072"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"582.83240"	"1164.65752"	"1164.65744"	"0.07"	"0.00004"	"7/62"	"7"	"62"	"2570127.08843994"	"HCD"	"MS2"	"28.16863"	"156.0"	"100.000"	"60.5382"	"19633"	"19633"	"19612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.1"	""	"197.8"	""	"226.4"	""	"238.3"	""	"266.3"	"256.0"	""	"716"	"17"	"35.000"	"28.000"	"0.658996376525886"	"24"	"0.0001991"	"0.005792"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"582.83240"	"1164.65752"	"1164.65744"	"0.07"	"0.00004"	"7/62"	"7"	"62"	"3084919.24505615"	"HCD"	"MS2"	"17.10173"	"164.8"	"100.000"	"60.6972"	"19665"	"19665"	"19647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.0"	""	"226.7"	""	"237.9"	""	"253.9"	""	"264.1"	"257.8"	""	"716"	"26"	"35.000"	"28.000"	"0.0854836439282918"	"27"	"0.0001991"	"0.004858"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVGFATR"	"[K].eVGVGFATR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"582.83252"	"1164.65776"	"1164.65744"	"0.28"	"0.00016"	"7/78"	"7"	"78"	"4582578.66601563"	"HCD"	"MS2"	"0.8231478"	"220.1"	"100.000"	"53.7480"	"16843"	"16843"	"16825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"651.9"	""	"225.1"	""	"249.1"	""	"273.5"	"0.6"	"357.3"	"318.1"	""	"715"	"38"	"35.000"	"28.000"	"0.00619834929197104"	"23"	"9.9E-05"	"0.0005168"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYAQILR"	"[R].dGYAQILR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"582.83264"	"1164.65801"	"1164.65744"	"0.49"	"0.00028"	"5/62"	"5"	"62"	"2568649.47363281"	"HCD"	"MS2"	"0"	"133.0"	"100.000"	"61.3071"	"19914"	"19914"	"19896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.2"	""	"170.5"	""	"193.1"	""	"187.6"	""	"216.7"	"240.2"	""	"718"	"23"	"35.000"	"28.000"	"0.193684313482931"	"25"	"0.0001991"	"0.004472"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVGFATR"	"[K].eVGVGFATR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"582.83276"	"1164.65825"	"1164.65744"	"0.70"	"0.00041"	"7/78"	"7"	"78"	"4172918.44262695"	"HCD"	"MS2"	"5.182824"	"198.1"	"100.000"	"53.4695"	"16763"	"16763"	"16744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"579.1"	""	"192.0"	""	"256.9"	""	"231.5"	"1.9"	"306.3"	"299.2"	""	"718"	"36"	"35.000"	"28.000"	"0.00922772086014022"	"22"	"9.9E-05"	"0.0006424"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYLDDLR"	"[R].aAYLDDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"583.32288"	"1165.63848"	"1165.64145"	"-2.56"	"-0.00149"	"4/58"	"4"	"58"	"776480.411560059"	"HCD"	"MS2"	"15.60276"	"45.2"	"100.000"	"71.5823"	"24082"	"24082"	"24052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"50.1"	""	"62.0"	""	"81.4"	""	"88.0"	"85.1"	""	"640"	"21"	"35.000"	"28.000"	"0.239414240163569"	"22"	"0.001348"	"0.01105"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"583.32385"	"1165.64043"	"1165.64145"	"-0.88"	"-0.00051"	"5/62"	"5"	"62"	"899698.596496582"	"HCD"	"MS2"	"25.77743"	"48.3"	"100.000"	"68.0865"	"22693"	"22693"	"22668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.1"	""	"56.7"	""	"80.1"	""	"75.8"	""	"85.7"	"86.4"	""	"645"	"36"	"35.000"	"28.000"	"0.00732031414732533"	"22"	"0.0001991"	"0.003751"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSILDADR"	"[K].fSILDADR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"583.32391"	"1165.64055"	"1165.64145"	"-0.78"	"-0.00045"	"7/66"	"7"	"66"	"1703027.11541748"	"HCD"	"MS2"	"25.58747"	"85.2"	"100.000"	"91.4853"	"32119"	"32119"	"32105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.5"	""	"111.6"	""	"104.7"	""	"143.1"	""	"180.2"	"183.9"	""	"641"	"31"	"35.000"	"28.000"	"0.0232181725204035"	"27"	"0.0001686"	"0.00172"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"583.32391"	"1165.64055"	"1165.64145"	"-0.78"	"-0.00045"	"5/62"	"5"	"62"	"4005361.58612061"	"HCD"	"MS2"	"0.8971933"	"178.6"	"100.000"	"68.3872"	"22783"	"22783"	"22764"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"309.3"	""	"248.0"	""	"256.1"	""	"246.1"	""	"308.4"	"325.5"	""	"641"	"37"	"35.000"	"28.000"	"0.00638010805145394"	"23"	"0.0001991"	"0.002464"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"583.32397"	"1165.64067"	"1165.64145"	"-0.67"	"-0.00039"	"5/62"	"5"	"62"	"1112954.83551025"	"HCD"	"MS2"	"7.559272"	"58.0"	"100.000"	"68.0714"	"22655"	"22655"	"22628"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.7"	""	"78.7"	""	"78.6"	""	"97.8"	"0.3"	"99.9"	"104.7"	""	"652"	"34"	"35.000"	"28.000"	"0.0129186639167273"	"24"	"0.0001991"	"0.004271"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"583.32404"	"1165.64079"	"1165.64145"	"-0.57"	"-0.00033"	"6/62"	"6"	"62"	"4206453.47149658"	"HCD"	"MS2"	"0"	"178.5"	"100.000"	"68.3746"	"22811"	"22811"	"22794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"316.0"	""	"259.5"	""	"260.2"	""	"250.2"	"1.4"	"295.9"	"304.3"	""	"653"	"38"	"35.000"	"28.000"	"0.00568699944162361"	"23"	"0.0001991"	"0.002995"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"583.32410"	"1165.64092"	"1165.64145"	"-0.46"	"-0.00027"	"6/62"	"6"	"62"	"1339830.92956543"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"68.6926"	"22940"	"22940"	"22922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.0"	""	"95.7"	""	"97.6"	""	"96.5"	"1.1"	"122.1"	"115.6"	""	"653"	"24"	"35.000"	"28.000"	"0.123846342593907"	"22"	"0.0005161"	"0.006544"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITFEDVR"	"[R].gITFEDVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"583.32410"	"1165.64092"	"1165.64145"	"-0.46"	"-0.00027"	"6/62"	"6"	"62"	"1080057.08148193"	"HCD"	"MS2"	"3.967751"	"54.3"	"100.000"	"68.6823"	"22903"	"22903"	"22886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.1"	""	"69.3"	""	"73.6"	""	"78.7"	""	"102.4"	"106.8"	""	"653"	"22"	"35.000"	"28.000"	"0.200393294686305"	"21"	"0.00167"	"0.01493"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSILDADR"	"[K].fSILDADR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"583.32434"	"1165.64141"	"1165.64145"	"-0.04"	"-0.00002"	"4/66"	"4"	"66"	"1318066.55249023"	"HCD"	"MS2"	"20.77981"	"70.7"	"100.000"	"91.7270"	"32253"	"32253"	"32237"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.0"	""	"84.0"	""	"94.7"	""	"111.8"	""	"149.7"	"157.3"	""	"653"	"24"	"35.000"	"28.000"	"0.119366699461685"	"26"	"0.0001991"	"0.002388"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAYLDDLR"	"[R].aAYLDDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"Q08602"	"Geranylgeranyl transferase type-2 subunit alpha OS=Rattus norvegicus OX=10116 GN=Rabggta PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"583.32471"	"1165.64214"	"1165.64145"	"0.59"	"0.00034"	"5/58"	"5"	"58"	"1149425.95452881"	"HCD"	"MS2"	"12.01554"	"58.4"	"100.000"	"71.7365"	"24175"	"24175"	"24155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.7"	""	"72.8"	""	"74.8"	""	"113.7"	"0.6"	"108.4"	"107.2"	""	"658"	"29"	"35.000"	"28.000"	"0.037170285592735"	"24"	"0.0001991"	"0.005091"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSILDADR"	"[K].fSILDADR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"583.32495"	"1165.64263"	"1165.64145"	"1.01"	"0.00059"	"5/66"	"5"	"66"	"1418537.19714355"	"HCD"	"MS2"	"20.3981"	"81.2"	"100.000"	"91.7876"	"32242"	"32242"	"32225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.1"	"1.9"	"90.6"	""	"106.3"	""	"134.3"	""	"183.8"	"163.3"	""	"658"	"38"	"35.000"	"28.000"	"0.00522631880288669"	"26"	"0.0001686"	"0.001394"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSILDADR"	"[K].fSILDADR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"Q6QBQ4"	"Phospholipid scramblase 3 OS=Rattus norvegicus OX=10116 GN=Plscr3 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"583.32526"	"1165.64324"	"1165.64145"	"1.53"	"0.00089"	"9/66"	"9"	"66"	"1477560.12347412"	"HCD"	"MS2"	"19.29158"	"75.9"	"100.000"	"91.4154"	"32127"	"32127"	"32109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.8"	""	"85.6"	""	"93.5"	""	"126.4"	""	"173.4"	"172.7"	""	"642"	"32"	"35.000"	"28.000"	"0.0224132601708772"	"27"	"9.9E-05"	"0.0008348"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTNQIIL"	"[R].sFTNqIIL.[-]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"583.33710"	"1165.66692"	"1165.66661"	"0.27"	"0.00016"	"4/62"	"4"	"62"	"371344.194030762"	"HCD"	"MS2"	"3.437192"	"9.1"	"100.000"	"114.0193"	"41133"	"41133"	"41113"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"8.8"	""	"11.8"	""	"8.0"	"2.1"	"18.7"	"24.9"	""	"549"	"22"	"34.000"	"27.000"	"0.161265827269424"	"16"	"0.007717"	"0.09846"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIIYVTR"	"[K].gDIIYVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XXR3"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1"	"Q5XXR3"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"583.34210"	"1165.67693"	"1165.67784"	"-0.78"	"-0.00046"	"5/66"	"5"	"66"	"982377.425537109"	"HCD"	"MS2"	"47.4381"	"60.6"	"100.000"	"61.9141"	"20190"	"20190"	"20161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.3"	""	"81.6"	""	"80.1"	""	"100.5"	"0.1"	"120.3"	"111.8"	""	"438"	"27"	"33.000"	"26.000"	"0.0394860885248245"	"21"	"0.0001991"	"0.002833"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIIYVTR"	"[K].gDIIYVTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XXR3"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1"	"Q5XXR3"	"Rho guanine nucleotide exchange factor 6 OS=Rattus norvegicus OX=10116 GN=Arhgef6 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"583.34320"	"1165.67912"	"1165.67784"	"1.10"	"0.00064"	"5/66"	"5"	"66"	"970101.135620117"	"HCD"	"MS2"	"33.54821"	"59.4"	"100.000"	"61.9723"	"20180"	"20180"	"20151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.8"	""	"89.8"	""	"82.6"	""	"94.2"	""	"110.1"	"106.7"	""	"448"	"19"	"33.000"	"26.000"	"0.253657681364765"	"17"	"0.001348"	"0.01102"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STEAATK"	"[R].sTEAATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11662"	"NADH-ubiquinone oxidoreductase chain 2 OS=Rattus norvegicus OX=10116 GN=Mtnd2 PE=3 SV=3"	"P11662"	"NADH-ubiquinone oxidoreductase chain 2 OS=Rattus norvegicus OX=10116 GN=Mtnd2 PE=3 SV=3"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"583.34491"	"1165.68254"	"1165.68287"	"-0.28"	"-0.00017"	"5/58"	"5"	"58"	"607490.284057617"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"23.6867"	"4737"	"4737"	"4714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.1"	""	"58.7"	""	"74.2"	""	"95.9"	""	"98.8"	"118.5"	""	"430"	"14"	"33.000"	"26.000"	"0.955957225058584"	"23"	"0.004852"	"0.05995"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEGIAYR"	"[K].nDEGIAYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.80347"	"1166.59966"	"1166.60032"	"-0.57"	"-0.00033"	"4/72"	"4"	"72"	"2800448.37036133"	"HCD"	"MS2"	"39.87332"	"192.3"	"100.000"	"33.3174"	"8554"	"8554"	"8534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"299.7"	""	"249.1"	""	"260.1"	""	"293.8"	""	"388.3"	"334.7"	""	"518"	"15"	"34.000"	"27.000"	"0.740115950734112"	"13"	"0.002673"	"0.02822"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEGIAYR"	"[K].nDEGIAYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"583.80353"	"1166.59978"	"1166.60032"	"-0.46"	"-0.00027"	"4/72"	"4"	"72"	"2856872.89172363"	"HCD"	"MS2"	"20.60358"	"193.9"	"100.000"	"33.1954"	"8542"	"8542"	"8521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.0"	""	"244.9"	""	"243.1"	""	"306.2"	""	"405.8"	"347.1"	""	"518"	"17"	"34.000"	"27.000"	"0.525169824356012"	"15"	"0.002035"	"0.01816"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SGNSESK"	"[K].sGNSESk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"583.82434"	"1166.64141"	"1166.64174"	"-0.28"	"-0.00017"	"5/66"	"5"	"66"	"877955.916625977"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"19.7728"	"3193"	"3193"	"3181"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.0"	""	"76.7"	""	"76.7"	""	"155.0"	""	"175.3"	"120.9"	""	"572"	"12"	"34.000"	"27.000"	"1.76752690439587"	"19"	"0.003818"	"0.04155"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HENVIGIR"	"[R].hENVIGIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.84381"	"1166.68035"	"1166.68432"	"-3.41"	"-0.00199"	"6/66"	"6"	"66"	"475540.328796387"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"30.5623"	"7486"	"7486"	"7477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.1"	""	"44.3"	""	"49.5"	""	"72.0"	"2.4"	"82.5"	"75.3"	""	"410"	"24"	"33.000"	"26.000"	"0.0788413153192976"	"14"	"0.002559"	"0.0261"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HENVIGIR"	"[R].hENVIGIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.84467"	"1166.68205"	"1166.68432"	"-1.94"	"-0.00113"	"6/66"	"6"	"66"	"531739.202819824"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"30.5632"	"7450"	"7450"	"7425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.3"	""	"55.1"	""	"45.2"	""	"81.5"	"0.9"	"86.5"	"79.8"	""	"404"	"27"	"33.000"	"26.000"	"0.0392962736487778"	"14"	"0.000264"	"0.006095"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAALAHLDR"	"[K].aAALAHLDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"389.56586"	"1166.68302"	"1166.68432"	"-1.12"	"-0.00043"	"7/64"	"7"	"64"	"9769052.56005859"	"HCD"	"MS2"	"31.18926"	"167.7"	"100.000"	"38.7901"	"10773"	"10773"	"10749"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.0"	""	"197.7"	""	"194.2"	""	"312.3"	""	"327.5"	"380.8"	""	"392"	"44"	"32.000"	"25.000"	"0.000748610770846491"	"17"	"9.9E-05"	"0.0007418"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAALAHLDR"	"[K].aAALAHLDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"389.56592"	"1166.68320"	"1166.68432"	"-0.96"	"-0.00037"	"7/64"	"7"	"64"	"10443958.4298096"	"HCD"	"MS2"	"24.29109"	"182.0"	"100.000"	"38.7052"	"10774"	"10774"	"10754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.9"	""	"207.6"	""	"216.9"	""	"333.9"	""	"373.6"	"406.5"	""	"392"	"43"	"32.000"	"25.000"	"0.00104293218816292"	"17"	"9.9E-05"	"0.0009012"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIEPGVPR"	"[R].vAIEPGVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"583.85760"	"1166.70793"	"1166.70947"	"-1.32"	"-0.00077"	"6/64"	"6"	"64"	"2443260.89050293"	"HCD"	"MS2"	"25.84033"	"116.1"	"100.000"	"56.9066"	"18156"	"18156"	"18137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"206.8"	""	"171.7"	""	"185.8"	""	"161.8"	""	"192.0"	"180.0"	""	"224"	"22"	"30.000"	"23.000"	"0.065798807483335"	"17"	"0.0001686"	"0.001804"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIEPGVPR"	"[R].vAIEPGVPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.85828"	"1166.70928"	"1166.70947"	"-0.17"	"-0.00010"	"6/64"	"6"	"64"	"2407569.26330566"	"HCD"	"MS2"	"21.59977"	"113.5"	"100.000"	"57.1374"	"18215"	"18215"	"18196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.2"	""	"156.6"	""	"185.5"	""	"175.7"	""	"186.0"	"181.4"	""	"240"	"36"	"30.000"	"23.000"	"0.00328988900631346"	"15"	"9.9E-05"	"0.0004203"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGQYDNR"	"[R].sVGQYDNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"584.30042"	"1167.59355"	"1167.59557"	"-1.72"	"-0.00101"	"7/74"	"7"	"74"	"1129679.11480713"	"HCD"	"MS2"	"0"	"75.2"	"100.000"	"25.9746"	"5623"	"5623"	"5599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.2"	""	"107.0"	""	"104.5"	""	"129.2"	"0.6"	"141.0"	"126.6"	""	"462"	"30"	"33.000"	"26.000"	"0.0256810029002048"	"15"	"0.0001991"	"0.003225"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGQYDNR"	"[R].sVGQYDNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"584.30078"	"1167.59429"	"1167.59557"	"-1.10"	"-0.00064"	"7/74"	"7"	"74"	"1114746.61859131"	"HCD"	"MS2"	"0"	"73.4"	"100.000"	"25.8667"	"5619"	"5619"	"5593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.2"	""	"95.7"	""	"107.3"	""	"115.5"	"2.3"	"140.8"	"126.4"	""	"469"	"24"	"33.000"	"26.000"	"0.0991157900452839"	"15"	"0.001348"	"0.01147"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMGEFGLR"	"[R].eMGEFGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"584.30457"	"1167.60185"	"1167.60296"	"-0.95"	"-0.00055"	"6/62"	"6"	"62"	"681997.420959473"	"HCD"	"MS2"	"11.74427"	"42.0"	"100.000"	"71.1975"	"23956"	"23956"	"23932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"63.7"	""	"65.1"	""	"50.3"	"1.1"	"76.0"	"66.1"	""	"509"	"27"	"34.000"	"27.000"	"0.04739011762807"	"19"	"0.001596"	"0.01305"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMGEFGLR"	"[R].eMGEFGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"584.30469"	"1167.60210"	"1167.60296"	"-0.74"	"-0.00043"	"7/62"	"7"	"62"	"565002.279907227"	"HCD"	"MS2"	"16.18298"	"37.6"	"100.000"	"71.0964"	"23884"	"23884"	"23854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.6"	""	"52.3"	""	"57.2"	""	"54.1"	"1.2"	"67.7"	"61.9"	""	"509"	"30"	"34.000"	"27.000"	"0.0244167460720805"	"19"	"9.9E-05"	"0.0007546"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMGEFGLR"	"[R].eMGEFGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"584.30469"	"1167.60210"	"1167.60296"	"-0.74"	"-0.00043"	"7/62"	"7"	"62"	"777136.192687988"	"HCD"	"MS2"	"12.57753"	"46.5"	"100.000"	"71.5131"	"24084"	"24084"	"24064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.6"	""	"68.4"	""	"76.5"	""	"45.5"	"0.1"	"91.7"	"81.9"	""	"509"	"30"	"34.000"	"27.000"	"0.0275224940605325"	"26"	"0.0001991"	"0.004139"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMGEFGLR"	"[R].eMGEFGLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"Q63639"	"Retinal dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Aldh1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"584.30505"	"1167.60283"	"1167.60296"	"-0.11"	"-0.00006"	"6/62"	"6"	"62"	"848035.103515625"	"HCD"	"MS2"	"14.39086"	"47.5"	"100.000"	"71.4166"	"24014"	"24014"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.2"	""	"62.5"	""	"79.8"	""	"56.0"	"0.8"	"87.3"	"80.9"	""	"510"	"29"	"34.000"	"27.000"	"0.0336155468331884"	"26"	"0.0001686"	"0.001695"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"584.31335"	"1167.61943"	"1167.62072"	"-1.10"	"-0.00064"	"6/68"	"6"	"68"	"18336377.7939453"	"HCD"	"MS2"	"2.58579"	"338.8"	"44.081"	"53.2097"	"16658"	"16658"	"16641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"527.2"	""	"508.3"	""	"483.6"	""	"515.5"	""	"569.4"	"607.4"	""	"506"	"30"	"34.000"	"27.000"	"0.0255929601927754"	"24"	"0.0001991"	"0.00493"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"584.31372"	"1167.62016"	"1167.62072"	"-0.47"	"-0.00028"	"6/68"	"6"	"68"	"4995835.68865967"	"HCD"	"MS2"	"9.163751"	"239.5"	"100.000"	"52.9105"	"16535"	"16535"	"16514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"395.4"	""	"356.0"	""	"334.6"	""	"384.1"	"2.5"	"372.6"	"419.4"	""	"510"	"29"	"34.000"	"27.000"	"0.0338485586721084"	"23"	"0.0001991"	"0.003689"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"584.31384"	"1167.62041"	"1167.62072"	"-0.27"	"-0.00015"	"6/68"	"6"	"68"	"14979121.6829834"	"HCD"	"MS2"	"0"	"379.3"	"58.620"	"53.5480"	"16762"	"16762"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"633.2"	""	"560.6"	""	"533.1"	""	"555.1"	""	"624.4"	"683.7"	""	"510"	"28"	"34.000"	"27.000"	"0.0367739414638841"	"24"	"0.0001991"	"0.005932"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLIDGSR"	"[R].dYLIDGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"584.31415"	"1167.62102"	"1167.62072"	"0.26"	"0.00015"	"6/68"	"6"	"68"	"6949436.49499512"	"HCD"	"MS2"	"2.265138"	"321.4"	"100.000"	"53.2439"	"16637"	"16637"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"507.0"	""	"485.6"	""	"452.4"	""	"511.6"	"0.4"	"535.0"	"548.2"	""	"516"	"30"	"34.000"	"27.000"	"0.0268299402783897"	"25"	"0.0001991"	"0.003513"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSVALER"	"[R].tYSVALER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"584.33142"	"1167.65557"	"1167.65710"	"-1.32"	"-0.00077"	"7/68"	"7"	"68"	"1461016.90856934"	"HCD"	"MS2"	"7.686337"	"95.9"	"100.000"	"49.8649"	"15299"	"15299"	"15276"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.5"	"2.2"	"111.9"	""	"135.0"	""	"152.3"	"2.2"	"189.6"	"186.2"	""	"381"	"36"	"32.000"	"25.000"	"0.00469780493743142"	""	"0.0001686"	"0.001088"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"584.33142"	"1167.65557"	"1167.65710"	"-1.32"	"-0.00077"	"7/60"	"7"	"60"	"38636644.6708984"	"HCD"	"MS2"	"0"	"339.4"	"20.265"	"52.1619"	"16196"	"16196"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"517.3"	""	"498.3"	""	"504.2"	""	"510.9"	""	"584.1"	"598.9"	""	"381"	"36"	"32.000"	"25.000"	"0.00533205941390346"	"22"	"0.0009352"	"0.007895"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"584.33148"	"1167.65569"	"1167.65710"	"-1.21"	"-0.00071"	"6/60"	"6"	"60"	"4168343.55175781"	"HCD"	"MS2"	"31.89542"	"262.2"	"100.000"	"54.0679"	"17007"	"17007"	"16984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"351.1"	""	"366.4"	""	"392.3"	""	"428.1"	""	"518.1"	"429.8"	""	"381"	"29"	"32.000"	"25.000"	"0.0258758711574853"	"21"	"0.0001991"	"0.005416"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYSVALER"	"[R].tYSVALER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"584.33173"	"1167.65618"	"1167.65710"	"-0.80"	"-0.00046"	"7/68"	"7"	"68"	"1125763.59588623"	"HCD"	"MS2"	"43.25751"	"74.0"	"100.000"	"50.1421"	"15377"	"15377"	"15354"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.9"	""	"90.2"	""	"96.6"	""	"131.7"	""	"150.1"	"146.6"	""	"387"	"34"	"32.000"	"25.000"	"0.006929166057936"	"22"	"0.0001991"	"0.002819"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"584.33173"	"1167.65618"	"1167.65710"	"-0.80"	"-0.00046"	"7/60"	"7"	"60"	"3621757.33996582"	"HCD"	"MS2"	"39.65127"	"170.4"	"100.000"	"51.8625"	"16073"	"16073"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.7"	""	"239.8"	""	"259.4"	""	"266.2"	"0.7"	"294.5"	"301.9"	""	"387"	"20"	"32.000"	"25.000"	"0.178929096657046"	"20"	"0.0001991"	"0.004871"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"584.33185"	"1167.65642"	"1167.65710"	"-0.59"	"-0.00034"	"11/60"	"11"	"60"	"4501473.00317383"	"HCD"	"MS2"	"0.9068785"	"215.2"	"100.000"	"52.2082"	"16248"	"16248"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"326.1"	""	"300.1"	""	"309.7"	""	"328.9"	"1.2"	"370.6"	"400.3"	""	"417"	"32"	"33.000"	"26.000"	"0.0123056925215829"	"22"	"0.0001991"	"0.002175"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"584.33191"	"1167.65654"	"1167.65710"	"-0.48"	"-0.00028"	"6/60"	"6"	"60"	"8904526.47790527"	"HCD"	"MS2"	"0"	"397.8"	"100.000"	"54.3578"	"17126"	"17126"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"554.6"	""	"554.0"	""	"660.9"	""	"654.4"	""	"698.0"	"645.6"	""	"417"	"36"	"33.000"	"26.000"	"0.00479850618929673"	""	"0.0001991"	"0.003045"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"584.33197"	"1167.65666"	"1167.65710"	"-0.38"	"-0.00022"	"7/60"	"7"	"60"	"1334362.56195068"	"HCD"	"MS2"	"9.673262"	"85.9"	"100.000"	"54.6657"	"17251"	"17251"	"17236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.9"	"2.0"	"114.2"	""	"125.4"	""	"135.0"	"4.0"	"174.1"	"151.8"	""	"417"	"36"	"33.000"	"26.000"	"0.005534852596719"	""	"0.0001686"	"0.001147"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASYSLIR"	"[K].eASYSLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"584.33209"	"1167.65691"	"1167.65710"	"-0.17"	"-0.00010"	"7/64"	"7"	"64"	"2552839.57275391"	"HCD"	"MS2"	"44.05345"	"160.3"	"100.000"	"53.6836"	"16850"	"16850"	"16832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.4"	""	"235.0"	""	"229.8"	""	"253.1"	""	"297.6"	"268.1"	""	"417"	"20"	"33.000"	"26.000"	"0.207064696095764"	"22"	"0.0001991"	"0.003936"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"584.33209"	"1167.65691"	"1167.65710"	"-0.17"	"-0.00010"	"6/60"	"6"	"60"	"4270228.00030518"	"HCD"	"MS2"	"0"	"210.8"	"100.000"	"54.8385"	"17288"	"17288"	"17273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.7"	""	"280.7"	""	"349.1"	""	"357.8"	"1.7"	"381.2"	"328.8"	""	"417"	"35"	"33.000"	"26.000"	"0.0069840294064407"	""	"0.0001991"	"0.002161"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"584.33215"	"1167.65703"	"1167.65710"	"-0.06"	"-0.00004"	"7/60"	"7"	"60"	"6312484.87646484"	"HCD"	"MS2"	"0"	"294.6"	"100.000"	"52.4799"	"16325"	"16325"	"16307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"431.9"	""	"411.9"	""	"433.5"	""	"456.2"	""	"510.3"	"548.8"	""	"416"	"38"	"33.000"	"26.000"	"0.00319200332422253"	"23"	"0.0001991"	"0.002926"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"584.33215"	"1167.65703"	"1167.65710"	"-0.06"	"-0.00004"	"6/60"	"6"	"60"	"8566895.00598145"	"HCD"	"MS2"	"0.3524571"	"400.8"	"100.000"	"54.5623"	"17175"	"17175"	"17157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"574.8"	""	"584.1"	""	"645.6"	""	"664.3"	"0.7"	"699.3"	"622.9"	""	"416"	"36"	"33.000"	"26.000"	"0.00482018087193443"	""	"0.0001991"	"0.002924"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASYSLIR"	"[K].eASYSLIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"584.33221"	"1167.65715"	"1167.65710"	"0.04"	"0.00002"	"7/64"	"7"	"64"	"2536872.69403076"	"HCD"	"MS2"	"52.31465"	"160.9"	"100.000"	"53.9688"	"16933"	"16933"	"16920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"236.1"	""	"244.0"	""	"232.2"	""	"260.6"	""	"301.3"	"251.8"	""	"416"	"26"	"33.000"	"26.000"	"0.0530961870953539"	"22"	"0.0001991"	"0.002247"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGYLLR"	"[K].tTDGYLLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"584.33234"	"1167.65740"	"1167.65710"	"0.25"	"0.00015"	"7/60"	"7"	"60"	"2453616.78143311"	"HCD"	"MS2"	"40.39478"	"185.8"	"100.000"	"54.2773"	"17059"	"17059"	"17037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"236.0"	""	"249.2"	""	"270.6"	""	"307.3"	""	"372.6"	"329.7"	""	"416"	"16"	"33.000"	"26.000"	"0.487599593586543"	""	"0.002035"	"0.01818"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"584.33252"	"1167.65776"	"1167.65710"	"0.56"	"0.00033"	"7/60"	"7"	"60"	"34598014.6408691"	"HCD"	"MS2"	"0.1138626"	"480.9"	"32.540"	"51.9017"	"16124"	"16124"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"736.7"	""	"698.3"	""	"722.3"	""	"709.8"	""	"808.4"	"878.0"	""	"414"	"38"	"33.000"	"26.000"	"0.00310434760948991"	"19"	"0.0005161"	"0.006657"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"584.33258"	"1167.65788"	"1167.65710"	"0.67"	"0.00039"	"7/60"	"7"	"60"	"878668.466125488"	"HCD"	"MS2"	"0"	"55.9"	"100.000"	"55.1461"	"17413"	"17413"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.7"	""	"73.0"	""	"82.7"	""	"95.2"	"2.2"	"106.3"	"94.9"	""	"414"	"9"	"33.000"	"26.000"	"2.74138697785295"	"18"	"0.00192"	"0.01621"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYSESLAR"	"[K].lYSESLAR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1;Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50398; P50399"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1; Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"584.33258"	"1167.65788"	"1167.65710"	"0.67"	"0.00039"	"11/60"	"11"	"60"	"5384403.64678955"	"HCD"	"MS2"	"21.26727"	"255.3"	"100.000"	"51.6050"	"16003"	"16003"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"396.4"	""	"340.8"	""	"380.9"	""	"407.5"	"2.4"	"428.5"	"459.6"	""	"414"	"30"	"33.000"	"26.000"	"0.0188786243746673"	"18"	"0.0001991"	"0.004339"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEAFGK"	"[K].sAEAFGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"584.34204"	"1167.67681"	"1167.67739"	"-0.50"	"-0.00029"	"6/52"	"6"	"52"	"3303783.83056641"	"HCD"	"MS2"	"0"	"255.9"	"100.000"	"44.3658"	"13035"	"13035"	"13009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"355.3"	""	"331.4"	""	"349.9"	""	"424.8"	""	"448.5"	"518.9"	""	"326"	"25"	"32.000"	"25.000"	"0.0496806883309361"	""	"0.002286"	"0.02171"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEAFGK"	"[K].sAEAFGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"584.34229"	"1167.67729"	"1167.67739"	"-0.09"	"-0.00005"	"6/52"	"6"	"52"	"716750.48034668"	"HCD"	"MS2"	"0"	"71.6"	"100.000"	"44.7143"	"13176"	"13176"	"13156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.7"	""	"93.8"	""	"96.8"	""	"115.2"	""	"141.9"	"143.9"	""	"326"	"22"	"32.000"	"25.000"	"0.10379766990799"	"18"	"0.001488"	"0.01217"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEAFGK"	"[K].sAEAFGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"584.34277"	"1167.67827"	"1167.67739"	"0.75"	"0.00044"	"6/52"	"6"	"52"	"3622954.78271484"	"HCD"	"MS2"	"9.339506"	"287.5"	"100.000"	"44.1644"	"12988"	"12988"	"12969"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"405.5"	""	"355.9"	""	"355.1"	""	"484.8"	""	"558.7"	"569.9"	""	"317"	"25"	"32.000"	"25.000"	"0.0503534540197989"	""	"0.002525"	"0.02375"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.80219"	"1168.59709"	"1168.59821"	"-0.95"	"-0.00056"	"6/70"	"6"	"70"	"1709922.08251953"	"HCD"	"MS2"	"21.22345"	"111.0"	"100.000"	"43.9530"	"12902"	"12902"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.3"	""	"136.7"	""	"149.0"	""	"171.5"	"1.8"	"210.5"	"240.0"	""	"388"	"17"	"32.000"	"25.000"	"0.347377535682847"	"14"	"0.002755"	"0.02935"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"584.80237"	"1168.59746"	"1168.59821"	"-0.64"	"-0.00037"	"7/70"	"7"	"70"	"6861188.14160156"	"HCD"	"MS2"	"3.341168"	"333.9"	"100.000"	"43.5828"	"12750"	"12750"	"12730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"518.4"	""	"472.6"	""	"501.5"	""	"472.5"	"0.0"	"563.7"	"631.1"	""	"393"	"37"	"32.000"	"25.000"	"0.00355109715761147"	"23"	"0.0004582"	"0.006434"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGLYGER"	"[K].nMGLYGER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"584.80273"	"1168.59819"	"1168.59821"	"-0.01"	"-0.00001"	"6/70"	"6"	"70"	"6352144.88354492"	"HCD"	"MS2"	"5.55218"	"314.1"	"100.000"	"43.7409"	"12780"	"12780"	"12761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"508.7"	""	"454.0"	""	"481.5"	""	"429.4"	""	"527.5"	"571.1"	""	"386"	"40"	"32.000"	"25.000"	"0.00176423855603758"	"22"	"0.0001991"	"0.003937"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"585.30566"	"1169.60405"	"1169.60618"	"-1.82"	"-0.00107"	"9/86"	"9"	"86"	"1004972.61712646"	"HCD"	"MS2"	"6.539989"	"45.6"	"100.000"	"57.4215"	"18366"	"18366"	"18341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.0"	""	"59.9"	""	"61.1"	""	"83.0"	"2.5"	"88.2"	"86.7"	"NoQuanLabels"	"443"	"30"	"33.000"	"26.000"	"0.0215463510066598"	"20"	"0.0001991"	"0.005038"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"585.30615"	"1169.60503"	"1169.60618"	"-0.99"	"-0.00058"	"7/86"	"7"	"86"	"1366439.59448242"	"HCD"	"MS2"	"6.018308"	"47.0"	"100.000"	"57.6200"	"18411"	"18411"	"18391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.3"	""	"54.9"	""	"55.7"	""	"94.2"	"0.3"	"87.6"	"98.2"	"NoQuanLabels"	"443"	"26"	"33.000"	"26.000"	"0.0503934080916014"	"21"	"0.0001686"	"0.001162"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"585.30640"	"1169.60552"	"1169.60618"	"-0.57"	"-0.00033"	"9/86"	"9"	"86"	"2897417.04949951"	"HCD"	"MS2"	"0"	"51.5"	"100.000"	"57.3209"	"18289"	"18289"	"18280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"55.2"	""	"59.7"	""	"112.5"	""	"119.2"	"97.4"	"NoQuanLabels"	"443"	"59"	"33.000"	"26.000"	"2.64468365138837E-05"	"24"	"0"	"2.263E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLSHPSVFGR"	"[M].aGLSHPSVFGR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"585.30658"	"1169.60588"	"1169.60618"	"-0.26"	"-0.00015"	"9/86"	"9"	"86"	"3046704.15838623"	"HCD"	"MS2"	"2.520997"	"47.3"	"100.000"	"57.1022"	"18235"	"18235"	"18216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.2"	""	"45.3"	""	"48.4"	""	"109.2"	""	"96.1"	"98.7"	"NoQuanLabels"	"430"	"61"	"33.000"	"26.000"	"1.67663473762501E-05"	"24"	"0"	"6.622E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31104"	"1169.61479"	"1169.61861"	"-3.26"	"-0.00191"	"7/56"	"7"	"56"	"4848053.04547119"	"HCD"	"MS2"	"34.63249"	"221.1"	"100.000"	"45.3513"	"13469"	"13469"	"13451"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"431.9"	""	"187.9"	""	"186.1"	""	"541.5"	"0.4"	"359.8"	"383.8"	""	"423"	"14"	"33.000"	"26.000"	"0.813411619025923"	"13"	"0.003786"	"0.04088"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31122"	"1169.61516"	"1169.61861"	"-2.95"	"-0.00173"	"7/56"	"7"	"56"	"4562345.60577393"	"HCD"	"MS2"	"27.91051"	"201.4"	"100.000"	"45.6285"	"13548"	"13548"	"13525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"399.3"	""	"179.9"	""	"170.3"	""	"490.3"	""	"330.1"	"336.5"	""	"431"	"18"	"33.000"	"26.000"	"0.342331824322821"	"14"	"0.00455"	"0.05356"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vmEYINR.[L]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"585.31256"	"1169.61785"	"1169.61861"	"-0.65"	"-0.00038"	"5/50"	"5"	"50"	"3570926.07800293"	"HCD"	"MS2"	"27.76897"	"182.2"	"100.000"	"43.4976"	"12681"	"12681"	"12656"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.9"	""	"163.8"	""	"191.7"	""	"469.5"	""	"378.6"	"350.8"	""	"442"	"9"	"33.000"	"26.000"	"2.84703150924183"	"19"	"0.009275"	"0.1195"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31268"	"1169.61809"	"1169.61861"	"-0.45"	"-0.00026"	"7/56"	"7"	"56"	"4398152.109375"	"HCD"	"MS2"	"35.08663"	"243.0"	"100.000"	"46.0450"	"13718"	"13718"	"13700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.1"	""	"305.1"	""	"317.5"	""	"463.1"	""	"469.6"	"463.5"	""	"443"	"14"	"33.000"	"26.000"	"0.879779282074811"	"13"	"0.004751"	"0.05619"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vmEYINR.[L]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31305"	"1169.61882"	"1169.61861"	"0.18"	"0.00011"	"6/50"	"6"	"50"	"3685967.59912109"	"HCD"	"MS2"	"30.86336"	"190.2"	"100.000"	"43.3344"	"12649"	"12649"	"12619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.8"	""	"178.3"	""	"189.9"	""	"510.4"	""	"384.5"	"369.8"	""	"426"	"9"	"33.000"	"26.000"	"2.46819576861042"	"13"	"0.008327"	"0.1066"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAIDMGYR"	"[K].vAIDmGYR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.31323"	"1169.61919"	"1169.61861"	"0.49"	"0.00029"	"7/56"	"7"	"56"	"4366714.46514893"	"HCD"	"MS2"	"36.24494"	"248.8"	"100.000"	"45.7401"	"13628"	"13628"	"13608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"320.2"	""	"291.9"	""	"336.0"	""	"487.6"	""	"471.0"	"457.2"	""	"434"	"15"	"33.000"	"26.000"	"0.634541065992004"	"13"	"0.002559"	"0.02546"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMEYINR"	"[R].vmEYINR.[L]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"585.31439"	"1169.62151"	"1169.61861"	"2.48"	"0.00145"	"5/50"	"5"	"50"	"2198671.55706787"	"HCD"	"MS2"	"21.6439"	"119.5"	"100.000"	"44.1293"	"12938"	"12938"	"12913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.6"	""	"146.2"	""	"156.2"	""	"187.4"	""	"245.0"	"250.5"	""	"450"	"11"	"33.000"	"26.000"	"1.80793377491764"	"13"	"0.00981"	"0.1327"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGYAGK"	"[R].eSGYAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"585.33032"	"1169.65337"	"1169.65666"	"-2.81"	"-0.00165"	"6/50"	"6"	"50"	"1981225.7678833"	"HCD"	"MS2"	"11.76097"	"189.5"	"100.000"	"29.9634"	"7248"	"7248"	"7227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"319.4"	""	"260.6"	""	"238.3"	""	"287.0"	""	"349.5"	"344.5"	""	"422"	"22"	"33.000"	"26.000"	"0.142982358105852"	"21"	"0.00307"	"0.03378"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGYAGK"	"[R].eSGYAGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"585.33069"	"1169.65410"	"1169.65666"	"-2.19"	"-0.00128"	"6/50"	"6"	"50"	"2033967.1685791"	"HCD"	"MS2"	"12.17774"	"193.5"	"100.000"	"30.1160"	"7269"	"7269"	"7250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"318.0"	""	"270.7"	""	"230.2"	""	"297.3"	""	"353.4"	"368.4"	""	"437"	"21"	"33.000"	"26.000"	"0.181740383985934"	"20"	"0.002328"	"0.02226"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASYGVSK"	"[R].aSYGVSk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"585.34973"	"1169.69219"	"1169.69304"	"-0.73"	"-0.00043"	"10/56"	"10"	"56"	"8141564.84802246"	"HCD"	"MS2"	"25.76696"	"599.1"	"100.000"	"38.9119"	"10823"	"10823"	"10797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"846.0"	""	"642.6"	""	"606.5"	""	"1094.6"	""	"1258.5"	"1243.4"	""	"268"	"28"	"31.000"	"24.000"	"0.0208980035378812"	"21"	"0.001615"	"0.0133"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASYGVSK"	"[R].aSYGVSk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"585.35010"	"1169.69292"	"1169.69304"	"-0.11"	"-0.00006"	"6/56"	"6"	"56"	"7606565.18383789"	"HCD"	"MS2"	"18.55379"	"534.9"	"100.000"	"38.8244"	"10823"	"10823"	"10800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"747.7"	""	"583.7"	""	"555.1"	""	"982.8"	""	"1100.3"	"1110.1"	""	"268"	"35"	"31.000"	"24.000"	"0.00380281149811169"	""	"0.0005778"	"0.007022"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYGFINR"	"[R].nGYGFINR.[N]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"P62961"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3"	"P62961; Q62764"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3; Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"3"	"585.80859"	"1170.60991"	"1170.61049"	"-0.49"	"-0.00029"	"6/72"	"6"	"72"	"2346780.21820068"	"HCD"	"MS2"	"34.98757"	"136.0"	"100.000"	"61.4338"	"19997"	"19997"	"19974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.2"	""	"158.6"	""	"161.8"	""	"242.9"	""	"275.5"	"234.2"	""	"435"	"15"	"33.000"	"26.000"	"0.74551993573853"	"18"	"0.004893"	"0.06033"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYGFINR"	"[R].nGYGFINR.[N]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"2"	"P62961"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3"	"P62961; Q62764"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3; Y-box-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ybx3 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"585.80884"	"1170.61040"	"1170.61049"	"-0.08"	"-0.00004"	"7/72"	"7"	"72"	"2708060.47839355"	"HCD"	"MS2"	"24.46852"	"148.3"	"100.000"	"61.4567"	"19975"	"19975"	"19957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"238.6"	""	"163.8"	""	"181.1"	""	"255.1"	""	"288.2"	"280.5"	""	"440"	"18"	"33.000"	"26.000"	"0.386743195070912"	"18"	"0.003529"	"0.03854"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"585.81561"	"1170.62395"	"1170.62441"	"-0.39"	"-0.00023"	"7/64"	"7"	"64"	"5460532.22143555"	"HCD"	"MS2"	"7.475263"	"63.9"	"100.000"	"111.1321"	"39981"	"39981"	"39964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.1"	""	"98.4"	""	"97.4"	""	"82.3"	""	"106.2"	"127.3"	""	"453"	"45"	"33.000"	"26.000"	"0.000748287010448386"	""	"0.000885"	"0.007734"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELTPAYF"	"[K].tELTPAYF.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"P11348"	"Dihydropteridine reductase OS=Rattus norvegicus OX=10116 GN=Qdpr PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"585.81573"	"1170.62419"	"1170.62441"	"-0.18"	"-0.00011"	"7/64"	"7"	"64"	"6153571.64434814"	"HCD"	"MS2"	"22.98609"	"80.8"	"100.000"	"110.9957"	"39912"	"39912"	"39895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.6"	""	"131.5"	""	"118.8"	""	"99.6"	""	"131.3"	"155.8"	""	"453"	"43"	"33.000"	"26.000"	"0.00111703866595793"	"26"	"0.0009352"	"0.008278"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPSVNGVR"	"[R].lVPSVnGVR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"585.85541"	"1170.70354"	"1170.70439"	"-0.73"	"-0.00043"	"11/70"	"11"	"70"	"2345544.95422363"	"HCD"	"MS2"	"18.39233"	"85.1"	"100.000"	"67.0952"	"22259"	"22259"	"22240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.5"	""	"105.0"	""	"113.0"	""	"129.8"	"3.8"	"175.9"	"161.7"	""	"336"	"31"	"32.000"	"25.000"	"0.014038130706285"	"20"	"0"	"0.0002714"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPSVNGVR"	"[R].lVPSVnGVR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.85553"	"1170.70378"	"1170.70439"	"-0.52"	"-0.00030"	"11/70"	"11"	"70"	"788987.632263184"	"HCD"	"MS2"	"42.107"	"46.4"	"100.000"	"68.7696"	"22938"	"22938"	"22920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"59.5"	"1.8"	"61.6"	""	"65.1"	""	"98.7"	"97.4"	""	"336"	"20"	"32.000"	"25.000"	"0.168387279997087"	"14"	"0.004392"	"0.05173"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPSVNGVR"	"[R].lVPSVnGVR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"585.85590"	"1170.70452"	"1170.70439"	"0.11"	"0.00006"	"7/70"	"7"	"70"	"984532.063171387"	"HCD"	"MS2"	"8.674741"	"45.9"	"100.000"	"69.0359"	"23080"	"23080"	"23061"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.9"	""	"60.7"	""	"58.7"	""	"72.9"	"1.9"	"85.5"	"93.8"	""	"337"	"34"	"32.000"	"25.000"	"0.00680142487150415"	"24"	"0.001261"	"0.01013"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPSVNGVR"	"[R].lVPSVnGVR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"585.85602"	"1170.70476"	"1170.70439"	"0.32"	"0.00019"	"9/70"	"9"	"70"	"759839.014953613"	"HCD"	"MS2"	"16.7351"	"39.3"	"100.000"	"69.0855"	"23066"	"23066"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.9"	""	"50.1"	""	"52.4"	""	"61.8"	""	"72.5"	"86.0"	""	"337"	"16"	"32.000"	"25.000"	"0.403273704954308"	"18"	"0.007104"	"0.09098"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVPSVNGVR"	"[R].lVPSVnGVR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"585.85614"	"1170.70500"	"1170.70439"	"0.53"	"0.00031"	"8/70"	"8"	"70"	"2285036.4284668"	"HCD"	"MS2"	"12.06421"	"82.1"	"100.000"	"67.1170"	"22299"	"22299"	"22284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.2"	""	"111.0"	""	"107.2"	""	"123.7"	""	"175.9"	"146.3"	""	"337"	"32"	"32.000"	"25.000"	"0.010389625781366"	"20"	"9.9E-05"	"0.0004276"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVIETIR"	"[K].dPVIETIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"586.34772"	"1171.68816"	"1171.68840"	"-0.21"	"-0.00012"	"7/66"	"7"	"66"	"2008677.58502197"	"HCD"	"MS2"	"48.57447"	"110.3"	"100.000"	"58.9477"	"18988"	"18988"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.3"	""	"121.3"	""	"110.9"	""	"244.0"	"1.3"	"216.5"	"222.6"	""	"491"	"21"	"33.000"	"26.000"	"0.183675612375488"	""	"0.0001991"	"0.005186"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPVIETIR"	"[K].dPVIETIR.[N]"	"N-Term(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"586.34833"	"1171.68938"	"1171.68840"	"0.83"	"0.00049"	"6/66"	"6"	"66"	"2164793.40704346"	"HCD"	"MS2"	"48.17011"	"123.2"	"100.000"	"59.1686"	"19043"	"19043"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.2"	""	"126.3"	""	"120.8"	""	"267.8"	""	"259.7"	"251.8"	""	"487"	"24"	"33.000"	"26.000"	"0.0994257705720106"	""	"0.0001991"	"0.004634"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"586.35052"	"1171.69377"	"1171.69964"	"-5.01"	"-0.00293"	"7/80"	"7"	"80"	"2458617.16143799"	"HCD"	"MS2"	"49.14897"	"122.6"	"100.000"	"48.9316"	"14919"	"14919"	"14900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.2"	""	"173.6"	""	"173.2"	""	"208.6"	""	"197.4"	"232.1"	""	"431"	"49"	"33.000"	"26.000"	"0.000292716547739531"	""	"0"	"0.0001395"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"586.35114"	"1171.69499"	"1171.69964"	"-3.96"	"-0.00232"	"8/80"	"8"	"80"	"2993609.34075928"	"HCD"	"MS2"	"25.51189"	"147.0"	"100.000"	"49.2686"	"15022"	"15022"	"14998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.6"	""	"203.4"	""	"198.6"	""	"247.1"	"1.0"	"254.4"	"269.9"	""	"431"	"51"	"33.000"	"26.000"	"0.000189866032133227"	""	"0"	"0.0001776"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLQLPTR"	"[K].qSLQLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"586.35278"	"1171.69829"	"1171.69964"	"-1.15"	"-0.00067"	"5/80"	"5"	"80"	"2307456.43469238"	"HCD"	"MS2"	"9.58756"	"109.9"	"100.000"	"50.8694"	"15674"	"15674"	"15653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.1"	""	"125.4"	""	"151.2"	""	"181.0"	""	"190.6"	"228.0"	""	"409"	"26"	"33.000"	"26.000"	"0.0572391679865227"	"24"	"0.00212"	"0.01915"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"586.35278"	"1171.69829"	"1171.69964"	"-1.15"	"-0.00067"	"7/80"	"7"	"80"	"8946863.02191162"	"HCD"	"MS2"	"2.316297"	"338.6"	"100.000"	"49.5856"	"15150"	"15150"	"15132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"447.3"	""	"493.9"	""	"516.5"	""	"551.9"	""	"600.2"	"597.2"	""	"409"	"54"	"33.000"	"26.000"	"8.10388580052373E-05"	""	"0"	"0.0002216"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"586.35284"	"1171.69841"	"1171.69964"	"-1.05"	"-0.00061"	"7/80"	"7"	"80"	"9202106.32043457"	"HCD"	"MS2"	"1.394296"	"351.2"	"100.000"	"49.2188"	"15036"	"15036"	"15022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.9"	""	"527.4"	""	"514.7"	""	"581.4"	"0.4"	"647.3"	"616.2"	""	"409"	"54"	"33.000"	"26.000"	"8.16005925330581E-05"	""	"0"	"0.0002187"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLQLPTR"	"[K].qSLQLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"586.35315"	"1171.69902"	"1171.69964"	"-0.53"	"-0.00031"	"7/80"	"7"	"80"	"4099235.92645264"	"HCD"	"MS2"	"10.71415"	"173.3"	"100.000"	"50.4268"	"15528"	"15528"	"15508"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"267.3"	""	"198.4"	""	"223.5"	""	"291.3"	""	"297.6"	"364.0"	""	"421"	"42"	"33.000"	"26.000"	"0.00134974615871176"	"26"	"9.9E-05"	"0.0007593"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLQLPTR"	"[K].qSLQLPTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"586.35315"	"1171.69902"	"1171.69964"	"-0.53"	"-0.00031"	"6/80"	"6"	"80"	"4995406.34472656"	"HCD"	"MS2"	"28.20684"	"218.1"	"100.000"	"50.5569"	"15546"	"15546"	"15526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.0"	""	"250.3"	""	"285.3"	""	"390.3"	"3.9"	"382.4"	"426.8"	""	"421"	"28"	"33.000"	"26.000"	"0.0300782178266587"	"24"	"0.0001991"	"0.002762"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"586.35327"	"1171.69927"	"1171.69964"	"-0.32"	"-0.00019"	"8/80"	"8"	"80"	"3039650.31860352"	"HCD"	"MS2"	"4.806008"	"150.5"	"100.000"	"49.8710"	"15266"	"15266"	"15250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.3"	""	"210.0"	""	"212.8"	""	"256.3"	""	"288.4"	"274.2"	""	"419"	"54"	"33.000"	"26.000"	"7.85568439704289E-05"	""	"0"	"0.000105"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVEAAAVR"	"[R].nIVEAAAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"P62856"	"40S ribosomal protein S26 OS=Rattus norvegicus OX=10116 GN=Rps26 PE=3 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"586.35327"	"1171.69927"	"1171.69964"	"-0.32"	"-0.00019"	"7/80"	"7"	"80"	"3467630.32592773"	"HCD"	"MS2"	"7.845483"	"152.6"	"100.000"	"49.5314"	"15163"	"15163"	"15143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.1"	""	"212.6"	""	"203.3"	""	"251.1"	"0.8"	"304.5"	"282.1"	""	"419"	"54"	"33.000"	"26.000"	"8.99878814072438E-05"	""	"0"	"0.0001085"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"586.81079"	"1172.61431"	"1172.61490"	"-0.51"	"-0.00030"	"8/54"	"8"	"54"	"1102985.24591064"	"HCD"	"MS2"	"23.10429"	"59.5"	"100.000"	"73.9142"	"25027"	"25027"	"25006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.6"	""	"78.2"	""	"75.4"	""	"95.2"	""	"109.1"	"113.3"	""	"411"	"18"	"33.000"	"26.000"	"0.36375739093423"	"15"	"0.002525"	"0.02523"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLFYER"	"[K].tDLFYER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"586.81079"	"1172.61431"	"1172.61490"	"-0.51"	"-0.00030"	"6/58"	"6"	"58"	"1321529.52886963"	"HCD"	"MS2"	"52.52777"	"69.4"	"100.000"	"69.5985"	"23275"	"23275"	"23251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.2"	""	"92.4"	""	"95.9"	""	"103.2"	""	"125.1"	"144.8"	""	"411"	"10"	"33.000"	"26.000"	"1.84421617269904"	"17"	"0.003818"	"0.04201"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFSEIR"	"[K].yEFSEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"586.81085"	"1172.61443"	"1172.61490"	"-0.41"	"-0.00024"	"5/54"	"5"	"54"	"1105782.64758301"	"HCD"	"MS2"	"26.04712"	"60.0"	"100.000"	"65.5267"	"21658"	"21658"	"21632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.0"	""	"87.8"	""	"82.5"	""	"90.2"	""	"112.6"	"98.4"	""	"411"	"24"	"33.000"	"26.000"	"0.0888815922776943"	"24"	"0.002559"	"0.02599"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"586.81097"	"1172.61467"	"1172.61490"	"-0.20"	"-0.00012"	"6/54"	"6"	"54"	"1488939.82055664"	"HCD"	"MS2"	"0"	"74.8"	"100.000"	"74.9430"	"25474"	"25474"	"25459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.9"	""	"110.4"	""	"107.0"	""	"112.7"	""	"138.1"	"147.2"	""	"411"	"26"	"33.000"	"26.000"	"0.0502124978578611"	"19"	"0.001615"	"0.01441"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.81097"	"1172.61467"	"1172.61490"	"-0.20"	"-0.00012"	"5/54"	"5"	"54"	"1392195.34564209"	"HCD"	"MS2"	"34.96261"	"74.5"	"100.000"	"74.0305"	"25104"	"25104"	"25080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.5"	""	"110.2"	""	"112.3"	""	"108.3"	"0.6"	"144.1"	"128.4"	""	"411"	"16"	"33.000"	"26.000"	"0.47185854718709"	"14"	"0.003043"	"0.0327"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"586.81097"	"1172.61467"	"1172.61490"	"-0.20"	"-0.00012"	"10/54"	"10"	"54"	"19272304.7629395"	"HCD"	"MS2"	"0"	"446.3"	"52.981"	"74.3485"	"25234"	"25234"	"25217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"630.9"	""	"635.6"	""	"697.6"	""	"669.8"	""	"772.6"	"824.0"	""	"411"	"31"	"33.000"	"26.000"	"0.0164365939403944"	"19"	"0.003401"	"0.03812"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"586.81104"	"1172.61479"	"1172.61490"	"-0.09"	"-0.00006"	"10/54"	"10"	"54"	"13560086.6968994"	"HCD"	"MS2"	"0"	"419.8"	"88.267"	"74.1977"	"25143"	"25143"	"25126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"569.7"	""	"629.5"	""	"626.4"	""	"623.4"	""	"745.4"	"787.3"	""	"457"	"31"	"33.000"	"26.000"	"0.0181922411570358"	"20"	"0.003357"	"0.0377"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEFSEIR"	"[K].yEFSEIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"Q4G063"	"Cysteine-rich with EGF-like domain protein 2 OS=Rattus norvegicus OX=10116 GN=Creld2 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"586.81122"	"1172.61516"	"1172.61490"	"0.22"	"0.00013"	"5/54"	"5"	"54"	"1650905.78192139"	"HCD"	"MS2"	"17.03235"	"88.9"	"100.000"	"65.5923"	"21651"	"21651"	"21631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.5"	""	"117.0"	""	"130.1"	""	"131.3"	"1.0"	"164.2"	"154.6"	""	"453"	"19"	"33.000"	"26.000"	"0.295847706161862"	"23"	"0.002588"	"0.02691"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLFYER"	"[K].tDLFYER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"P83871"	"PHD finger-like domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Phf5a PE=2 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"586.81128"	"1172.61528"	"1172.61490"	"0.32"	"0.00019"	"6/58"	"6"	"58"	"1306403.96270752"	"HCD"	"MS2"	"44.42313"	"65.3"	"100.000"	"69.6578"	"23333"	"23333"	"23312"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.6"	""	"83.2"	""	"83.4"	""	"126.6"	""	"110.8"	"125.0"	""	"453"	"9"	"33.000"	"26.000"	"3.19939753857054"	"20"	"0.002834"	"0.03051"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"586.81128"	"1172.61528"	"1172.61490"	"0.32"	"0.00019"	"6/54"	"6"	"54"	"2624801.25061035"	"HCD"	"MS2"	"0.7634424"	"129.3"	"100.000"	"74.7806"	"25377"	"25377"	"25361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.4"	""	"160.6"	""	"196.0"	""	"196.5"	""	"248.5"	"254.5"	""	"453"	"27"	"33.000"	"26.000"	"0.0467808605291085"	"19"	"0.002525"	"0.02379"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"586.81140"	"1172.61553"	"1172.61490"	"0.53"	"0.00031"	"10/54"	"10"	"54"	"12782464.656311"	"HCD"	"MS2"	"0.2527745"	"436.2"	"72.008"	"74.6389"	"25352"	"25352"	"25335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"588.8"	""	"605.4"	""	"686.1"	""	"636.3"	""	"784.9"	"836.7"	""	"449"	"31"	"33.000"	"26.000"	"0.0177916548692866"	"20"	"0.004392"	"0.05145"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"586.81146"	"1172.61565"	"1172.61490"	"0.63"	"0.00037"	"10/54"	"10"	"54"	"15990749.847168"	"HCD"	"MS2"	"0.2400929"	"437.8"	"59.314"	"74.4949"	"25263"	"25263"	"25246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"610.6"	""	"624.8"	""	"672.5"	""	"629.2"	""	"766.1"	"851.2"	""	"452"	"31"	"33.000"	"26.000"	"0.0181179242325615"	"19"	"0.003904"	"0.04212"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"586.81152"	"1172.61577"	"1172.61490"	"0.74"	"0.00043"	"5/54"	"5"	"54"	"413012.932434082"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"75.3235"	"25629"	"25629"	"25607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"43.2"	""	"30.3"	""	"42.9"	"1.6"	"48.2"	"46.2"	""	"452"	"12"	"33.000"	"26.000"	"1.43254554744065"	"15"	"0.005426"	"0.06923"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTFDEYR"	"[K].lTFDEYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.81158"	"1172.61589"	"1172.61490"	"0.84"	"0.00049"	"5/54"	"5"	"54"	"604261.37298584"	"HCD"	"MS2"	"16.12274"	"36.2"	"100.000"	"75.0850"	"25501"	"25501"	"25476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.3"	""	"46.1"	""	"59.5"	""	"49.2"	""	"70.7"	"63.7"	""	"452"	"12"	"33.000"	"26.000"	"1.37122410487002"	"13"	"0.006814"	"0.08505"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"391.55850"	"1172.66095"	"1172.66252"	"-1.34"	"-0.00052"	"6/54"	"6"	"54"	"9368273.67785645"	"HCD"	"MS2"	"10.48726"	"119.2"	"79.710"	"49.5466"	"15134"	"15134"	"15117"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.1"	""	"131.3"	""	"150.7"	""	"198.1"	"0.8"	"245.1"	"265.2"	""	"613"	"39"	"34.000"	"27.000"	"0.00354348402231878"	"27"	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"391.55859"	"1172.66123"	"1172.66252"	"-1.11"	"-0.00043"	"6/54"	"6"	"54"	"9191874.04931641"	"HCD"	"MS2"	"14.88584"	"150.2"	"100.000"	"48.9638"	"14932"	"14932"	"14915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.2"	""	"170.2"	""	"187.5"	""	"265.9"	""	"319.3"	"315.3"	""	"613"	"36"	"34.000"	"27.000"	"0.00713559970474325"	"25"	"0.0001991"	"0.005263"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEAIR"	"[K].wTAPEAIR.[ET]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"Q62662"	"Tyrosine-protein kinase FRK OS=Rattus norvegicus OX=10116 GN=Frk PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"586.83435"	"1172.66142"	"1172.66252"	"-0.94"	"-0.00055"	"6/62"	"6"	"62"	"1289874.37738037"	"HCD"	"MS2"	"7.582942"	"74.6"	"100.000"	"71.6191"	"24127"	"24127"	"24107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.8"	""	"86.6"	""	"98.8"	""	"123.3"	""	"145.4"	"153.4"	""	"613"	"27"	"34.000"	"27.000"	"0.0686168028971196"	""	"0.004213"	"0.04675"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEALR"	"[K].wTAPEALR.[ET]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"586.83435"	"1172.66142"	"1172.66252"	"-0.94"	"-0.00055"	"6/62"	"6"	"62"	"1289874.37738037"	"HCD"	"MS2"	"7.582942"	"74.6"	"100.000"	"71.6191"	"24127"	"24127"	"24107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.8"	""	"86.6"	""	"98.8"	""	"123.3"	""	"145.4"	"153.4"	""	"613"	"27"	"34.000"	"27.000"	"0.0686168028971196"	""	"0.004213"	"0.04675"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"391.55884"	"1172.66196"	"1172.66252"	"-0.48"	"-0.00019"	"6/54"	"6"	"54"	"8572982.46722412"	"HCD"	"MS2"	"16.77209"	"145.0"	"100.000"	"49.2505"	"15014"	"15014"	"14998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.0"	""	"163.5"	""	"183.1"	""	"258.6"	""	"306.9"	"305.4"	""	"573"	"38"	"34.000"	"27.000"	"0.00476567724331054"	"27"	"0.0001991"	"0.003822"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HELIEFR"	"[K].hELIEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"391.55890"	"1172.66214"	"1172.66252"	"-0.32"	"-0.00013"	"6/54"	"6"	"54"	"8004539.31262207"	"HCD"	"MS2"	"10.34311"	"121.4"	"93.835"	"49.2646"	"15054"	"15054"	"15035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.7"	""	"137.3"	""	"152.6"	""	"215.0"	"0.5"	"250.0"	"259.1"	""	"573"	"36"	"34.000"	"27.000"	"0.00733034856598468"	"25"	"0.0001991"	"0.005784"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEAIR"	"[K].wTAPEAIR.[ET]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"Q62662"	"Tyrosine-protein kinase FRK OS=Rattus norvegicus OX=10116 GN=Frk PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"586.83490"	"1172.66252"	"1172.66252"	"0.00"	"0.00000"	"6/62"	"6"	"62"	"1220634.19927979"	"HCD"	"MS2"	"51.49978"	"68.2"	"100.000"	"71.3033"	"23999"	"23999"	"23980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.8"	""	"78.8"	""	"84.2"	""	"129.5"	"0.3"	"128.6"	"135.5"	""	"576"	"18"	"34.000"	"27.000"	"0.498187111453949"	"23"	"0.002462"	"0.02316"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEALR"	"[K].wTAPEALR.[ET]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"586.83490"	"1172.66252"	"1172.66252"	"0.00"	"0.00000"	"6/62"	"6"	"62"	"1220634.19927979"	"HCD"	"MS2"	"51.49978"	"68.2"	"100.000"	"71.3033"	"23999"	"23999"	"23980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.8"	""	"78.8"	""	"84.2"	""	"129.5"	"0.3"	"128.6"	"135.5"	""	"576"	"18"	"34.000"	"27.000"	"0.498187111453949"	"23"	"0.002462"	"0.02316"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEAIR"	"[K].wTAPEAIR.[ET]"	"N-Term(TMT6plex)"	"0"	"1"	""	""	"Q62662"	"Tyrosine-protein kinase FRK OS=Rattus norvegicus OX=10116 GN=Frk PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"586.83490"	"1172.66252"	"1172.66252"	"0.00"	"0.00000"	"6/62"	"6"	"62"	"1558353.11456299"	"HCD"	"MS2"	"37.92156"	"87.7"	"100.000"	"71.2875"	"23961"	"23961"	"23942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.4"	""	"103.9"	""	"118.1"	""	"135.6"	"0.7"	"166.1"	"169.0"	""	"576"	"26"	"34.000"	"27.000"	"0.0775162023530952"	""	"0.0001991"	"0.003647"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEALR"	"[K].wTAPEALR.[ET]"	"N-Term(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"586.83490"	"1172.66252"	"1172.66252"	"0.00"	"0.00000"	"6/62"	"6"	"62"	"1558353.11456299"	"HCD"	"MS2"	"37.92156"	"87.7"	"100.000"	"71.2875"	"23961"	"23961"	"23942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.4"	""	"103.9"	""	"118.1"	""	"135.6"	"0.7"	"166.1"	"169.0"	""	"576"	"26"	"34.000"	"27.000"	"0.0775162023530952"	""	"0.0001991"	"0.003647"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALLDQIR"	"[R].dALLDQIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"586.84491"	"1172.68254"	"1172.68365"	"-0.95"	"-0.00056"	"7/68"	"7"	"68"	"915778.695495605"	"HCD"	"MS2"	"30.74774"	"44.3"	"100.000"	"77.9784"	"26671"	"26671"	"26653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.1"	""	"54.7"	""	"65.0"	""	"84.7"	""	"88.6"	"74.4"	""	"556"	"29"	"34.000"	"27.000"	"0.0342014718285842"	""	"0.0001991"	"0.004401"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVALLER"	"[K].nEVALLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"586.84509"	"1172.68291"	"1172.68365"	"-0.63"	"-0.00037"	"6/80"	"6"	"80"	"1453194.69378662"	"HCD"	"MS2"	"5.2464"	"79.5"	"100.000"	"60.0525"	"19436"	"19436"	"19413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.1"	""	"84.3"	""	"84.3"	""	"146.0"	"0.9"	"177.6"	"172.2"	""	"593"	"38"	"34.000"	"27.000"	"0.0045606285084985"	"25"	"0.0001686"	"0.001607"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEELGQR"	"[R].vLEELGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"586.84546"	"1172.68364"	"1172.68365"	"-0.01"	"-0.00001"	"7/60"	"7"	"60"	"2055400.55712891"	"HCD"	"MS2"	"63.44101"	"110.7"	"100.000"	"67.7526"	"22557"	"22557"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.8"	""	"156.8"	""	"145.1"	""	"182.4"	""	"194.4"	"207.9"	""	"591"	"17"	"34.000"	"27.000"	"0.621666528950994"	"19"	"0.001951"	"0.01649"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEELGQR"	"[R].vLEELGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"Q66HA8"	"Heat shock protein 105 kDa OS=Rattus norvegicus OX=10116 GN=Hsph1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"586.84546"	"1172.68364"	"1172.68365"	"-0.01"	"-0.00001"	"7/60"	"7"	"60"	"2392520.50280762"	"HCD"	"MS2"	"57.09509"	"127.9"	"100.000"	"67.8020"	"22546"	"22546"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.9"	""	"168.6"	""	"180.3"	""	"203.0"	""	"233.7"	"244.8"	""	"591"	"28"	"34.000"	"27.000"	"0.050530952560918"	"25"	"0.0001686"	"0.001815"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVALLER"	"[K].nEVALLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"586.84558"	"1172.68389"	"1172.68365"	"0.20"	"0.00012"	"7/80"	"7"	"80"	"1546335.0723877"	"HCD"	"MS2"	"17.04314"	"86.1"	"100.000"	"60.2207"	"19471"	"19471"	"19451"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"86.4"	""	"109.0"	""	"162.7"	""	"185.9"	"185.9"	""	"594"	"40"	"34.000"	"27.000"	"0.00325654024254526"	""	"0.0001686"	"0.001561"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALLDQIR"	"[R].dALLDQIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"586.84601"	"1172.68474"	"1172.68365"	"0.93"	"0.00054"	"5/68"	"5"	"68"	"792052.435913086"	"HCD"	"MS2"	"38.5719"	"41.7"	"100.000"	"78.0658"	"26734"	"26734"	"26713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.6"	""	"46.9"	""	"57.6"	""	"78.0"	"0.4"	"79.9"	"74.1"	""	"591"	"30"	"34.000"	"27.000"	"0.0282850848067627"	"25"	"0.0001991"	"0.005083"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAGAAVVNR"	"[R].vSAGAAVVNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28077"	"Proteasome subunit beta type-9 OS=Rattus norvegicus OX=10116 GN=Psmb9 PE=1 SV=2"	"P28077"	"Proteasome subunit beta type-9 OS=Rattus norvegicus OX=10116 GN=Psmb9 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"586.85052"	"1172.69377"	"1172.69489"	"-0.95"	"-0.00056"	"9/74"	"9"	"74"	"4281778.77545166"	"HCD"	"MS2"	"0"	"203.9"	"100.000"	"36.0787"	"9710"	"9710"	"9692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.3"	""	"218.0"	""	"249.6"	""	"376.3"	""	"438.1"	"440.2"	""	"553"	"57"	"34.000"	"27.000"	"5.40374859521896E-05"	""	"0"	"3.605E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAGAAVVNR"	"[R].vSAGAAVVNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28077"	"Proteasome subunit beta type-9 OS=Rattus norvegicus OX=10116 GN=Psmb9 PE=1 SV=2"	"P28077"	"Proteasome subunit beta type-9 OS=Rattus norvegicus OX=10116 GN=Psmb9 PE=1 SV=2"	"0"	"2"	"2"	"0.7213"	"0.0000"	"1"	"1"	"1"	"586.85089"	"1172.69451"	"1172.69489"	"-0.32"	"-0.00019"	"9/74"	"9"	"74"	"3701948.50738525"	"HCD"	"MS2"	"0"	"179.7"	"100.000"	"36.2088"	"9725"	"9725"	"9714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.8"	""	"201.9"	""	"224.2"	""	"315.3"	""	"387.3"	"395.3"	""	"546"	"61"	"34.000"	"27.000"	"2.29700873669138E-05"	""	"0"	"6.568E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQAQLQR"	"[R].sLQAQLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"586.85120"	"1172.69512"	"1172.69489"	"0.20"	"0.00011"	"6/66"	"6"	"66"	"2833720.80450439"	"HCD"	"MS2"	"21.23182"	"173.6"	"100.000"	"39.9822"	"11288"	"11288"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.0"	""	"193.4"	""	"218.5"	""	"317.2"	""	"343.1"	"347.7"	""	"549"	"29"	"34.000"	"27.000"	"0.0369438667188357"	"22"	"0.0001991"	"0.002665"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQAQLQR"	"[R].sLQAQLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"586.85138"	"1172.69548"	"1172.69489"	"0.51"	"0.00030"	"6/66"	"6"	"66"	"2601032.90826416"	"HCD"	"MS2"	"24.75458"	"158.3"	"100.000"	"40.0138"	"11267"	"11267"	"11244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.6"	""	"190.5"	""	"195.7"	""	"282.1"	"2.0"	"312.3"	"305.1"	""	"549"	"30"	"34.000"	"27.000"	"0.0302372540469118"	"26"	"0.0001991"	"0.002893"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGNPEK"	"[K].lGGNPEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"586.85510"	"1172.70293"	"1172.70394"	"-0.87"	"-0.00051"	"6/54"	"6"	"54"	"4572861.79327393"	"HCD"	"MS2"	"48.62582"	"278.9"	"100.000"	"37.1157"	"10091"	"10091"	"10068"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"416.6"	""	"374.5"	""	"385.4"	""	"436.6"	""	"493.6"	"538.1"	""	"604"	"19"	"34.000"	"27.000"	"0.423649738777712"	"26"	"0.005266"	"0.06642"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGNPEK"	"[K].lGGNPEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"586.85510"	"1172.70293"	"1172.70394"	"-0.87"	"-0.00051"	"10/54"	"10"	"54"	"4364226.92700195"	"HCD"	"MS2"	"42.92519"	"272.1"	"100.000"	"37.0495"	"10102"	"10102"	"10074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"431.6"	""	"373.2"	""	"390.6"	""	"401.3"	""	"495.8"	"489.3"	""	"604"	"20"	"34.000"	"27.000"	"0.316961813453002"	"23"	"0.004751"	"0.05605"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSPALISR"	"[K].tVSPALISR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"586.86432"	"1172.72136"	"1172.72004"	"1.13"	"0.00066"	"6/78"	"6"	"78"	"1162793.29333496"	"HCD"	"MS2"	"37.35642"	"68.1"	"100.000"	"55.6176"	"17606"	"17606"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.5"	""	"82.0"	""	"95.0"	""	"113.4"	""	"133.9"	"126.1"	""	"529"	"23"	"34.000"	"27.000"	"0.126597659419338"	"18"	"0.005266"	"0.06674"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"586.87030"	"1172.73332"	"1172.73529"	"-1.68"	"-0.00099"	"6/66"	"6"	"66"	"2459688.26531982"	"HCD"	"MS2"	"13.70526"	"58.5"	"100.000"	"56.4151"	"17924"	"17924"	"17905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"63.4"	""	"70.4"	""	"114.7"	"0.4"	"112.6"	"113.0"	""	"451"	"15"	"33.000"	"26.000"	"0.65034910395505"	"25"	"0.007178"	"0.09178"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"586.87048"	"1172.73369"	"1172.73529"	"-1.37"	"-0.00080"	"6/66"	"6"	"66"	"4587966.63171387"	"HCD"	"MS2"	"32.66639"	"127.7"	"100.000"	"56.7002"	"18072"	"18072"	"18063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.7"	""	"128.7"	""	"134.9"	""	"279.7"	""	"260.9"	"267.1"	""	"430"	"26"	"33.000"	"26.000"	"0.0600396925866028"	"18"	"0.002286"	"0.02163"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"586.87048"	"1172.73369"	"1172.73529"	"-1.37"	"-0.00080"	"5/66"	"5"	"66"	"5021351.6696167"	"HCD"	"MS2"	"29.71972"	"146.9"	"100.000"	"56.6774"	"18064"	"18064"	"18047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.8"	""	"159.4"	""	"138.6"	""	"323.1"	""	"324.3"	"289.5"	""	"430"	"22"	"33.000"	"26.000"	"0.124004789629334"	"17"	"0.007104"	"0.09094"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"586.87067"	"1172.73406"	"1172.73529"	"-1.06"	"-0.00062"	"6/66"	"6"	"66"	"2071110.44122314"	"HCD"	"MS2"	"5.424912"	"58.5"	"100.000"	"57.3024"	"18282"	"18282"	"18264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"63.0"	""	"64.1"	""	"113.0"	"2.4"	"113.4"	"119.0"	""	"430"	"25"	"33.000"	"26.000"	"0.0733564759987146"	"18"	"0.004213"	"0.04751"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"586.87067"	"1172.73406"	"1172.73529"	"-1.06"	"-0.00062"	"6/66"	"6"	"66"	"4408088.24432373"	"HCD"	"MS2"	"27.32397"	"131.1"	"100.000"	"56.9928"	"18157"	"18157"	"18142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.0"	""	"141.4"	""	"131.3"	""	"274.8"	""	"276.2"	"271.2"	""	"430"	"26"	"33.000"	"26.000"	"0.0513379425826334"	"17"	"0.004959"	"0.06211"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"586.87067"	"1172.73406"	"1172.73529"	"-1.06"	"-0.00062"	"6/66"	"6"	"66"	"4783668.67510986"	"HCD"	"MS2"	"15.31998"	"105.8"	"100.000"	"56.6810"	"18030"	"18030"	"18020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.5"	""	"94.4"	""	"85.0"	""	"248.6"	""	"236.8"	"231.4"	""	"430"	"26"	"33.000"	"26.000"	"0.0603168232159619"	"21"	"0.004392"	"0.05195"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"586.87091"	"1172.73454"	"1172.73529"	"-0.64"	"-0.00038"	"7/66"	"7"	"66"	"2558379.59899902"	"HCD"	"MS2"	"43.87061"	"58.3"	"100.000"	"56.1249"	"17841"	"17841"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.3"	""	"66.8"	""	"52.7"	""	"116.7"	"1.8"	"123.1"	"115.9"	""	"422"	"16"	"33.000"	"26.000"	"0.534912141035058"	"25"	"0.004213"	"0.04594"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPPPPPIAR"	"[R].vPPPPPIAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"586.87097"	"1172.73467"	"1172.73529"	"-0.54"	"-0.00031"	"6/66"	"6"	"66"	"2098468.86126709"	"HCD"	"MS2"	"18.28511"	"63.0"	"100.000"	"57.0145"	"18200"	"18200"	"18182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.5"	""	"71.2"	""	"75.0"	""	"120.5"	"1.0"	"109.4"	"129.6"	""	"422"	"27"	"33.000"	"26.000"	"0.0383956881166707"	"18"	"0.002189"	"0.0203"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTEDR"	"[R].yFGGTEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"587.28906"	"1173.57085"	"1173.57377"	"-2.49"	"-0.00146"	"7/60"	"7"	"60"	"2012140.25488281"	"HCD"	"MS2"	"0"	"139.3"	"100.000"	"39.4060"	"11022"	"11022"	"11002"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"215.8"	""	"161.9"	""	"197.8"	""	"231.4"	"4.2"	"248.6"	"260.0"	""	"313"	"31"	"31.000"	"24.000"	"0.0116550553916287"	"18"	"0.001049"	"0.008824"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTEDR"	"[R].yFGGTEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"587.29004"	"1173.57280"	"1173.57377"	"-0.82"	"-0.00048"	"6/60"	"6"	"60"	"1892931.67211914"	"HCD"	"MS2"	"0"	"137.2"	"100.000"	"39.3424"	"11032"	"11032"	"11014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.1"	""	"161.2"	""	"192.3"	""	"232.0"	"0.5"	"248.0"	"257.7"	""	"332"	"34"	"32.000"	"25.000"	"0.00703247323642239"	"19"	"0.0001991"	"0.004597"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLDSGYR"	"[K].sFLDSGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"587.30823"	"1173.60918"	"1173.61015"	"-0.83"	"-0.00049"	"6/64"	"6"	"64"	"3137990.99487305"	"HCD"	"MS2"	"10.64647"	"165.9"	"100.000"	"63.5627"	"20859"	"20859"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.5"	""	"224.9"	""	"231.7"	""	"227.2"	"1.9"	"306.4"	"342.5"	""	"526"	"37"	"34.000"	"27.000"	"0.00557128978570356"	"24"	"0.0001991"	"0.003024"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLDSGYR"	"[K].sFLDSGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"587.30829"	"1173.60930"	"1173.61015"	"-0.73"	"-0.00043"	"5/64"	"5"	"64"	"2896085.60021973"	"HCD"	"MS2"	"10.21918"	"158.5"	"100.000"	"63.6262"	"20853"	"20853"	"20834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.1"	""	"211.7"	""	"224.7"	""	"236.4"	""	"286.7"	"315.0"	""	"507"	"34"	"34.000"	"27.000"	"0.0109895007671238"	"24"	"0.0001991"	"0.004798"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLDSGYR"	"[K].sFLDSGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"587.30853"	"1173.60979"	"1173.61015"	"-0.31"	"-0.00018"	"6/64"	"6"	"64"	"17691887.2593994"	"HCD"	"MS2"	"0"	"414.6"	"51.164"	"63.2566"	"20735"	"20735"	"20718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"566.7"	""	"525.0"	""	"546.5"	""	"657.0"	""	"798.2"	"841.3"	""	"509"	"42"	"34.000"	"27.000"	"0.00152646828907027"	"26"	"0.0001991"	"0.002826"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLDSGYR"	"[K].sFLDSGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"587.30865"	"1173.61003"	"1173.61015"	"-0.10"	"-0.00006"	"6/64"	"6"	"64"	"10360873.555603"	"HCD"	"MS2"	"0"	"461.7"	"100.000"	"63.0277"	"20610"	"20610"	"20593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"628.5"	""	"581.6"	""	"599.2"	""	"746.2"	""	"882.2"	"942.2"	""	"532"	"42"	"34.000"	"27.000"	"0.0015771813633828"	"26"	"0.0001991"	"0.003522"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLDSGYR"	"[K].sFLDSGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"587.30890"	"1173.61052"	"1173.61015"	"0.31"	"0.00018"	"6/64"	"6"	"64"	"9446249.89642334"	"HCD"	"MS2"	"0"	"456.4"	"100.000"	"62.9454"	"20609"	"20609"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"633.8"	""	"570.2"	""	"611.9"	""	"752.4"	""	"850.1"	"912.5"	""	"531"	"40"	"34.000"	"27.000"	"0.00266725492318914"	"26"	"0.0001991"	"0.00253"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFLDSGYR"	"[K].sFLDSGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"587.30914"	"1173.61101"	"1173.61015"	"0.73"	"0.00043"	"6/64"	"6"	"64"	"16362310.9859009"	"HCD"	"MS2"	"0.1183738"	"471.7"	"62.773"	"63.3271"	"20732"	"20732"	"20715"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"641.5"	""	"613.0"	""	"623.6"	""	"728.7"	""	"878.9"	"995.1"	""	"531"	"42"	"34.000"	"27.000"	"0.0015742167367599"	"26"	"0.0001991"	"0.005095"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITSAYYR"	"[R].aITSAYYR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"587.32648"	"1173.64568"	"1173.64654"	"-0.73"	"-0.00043"	"7/58"	"7"	"58"	"3253276.64959717"	"HCD"	"MS2"	"20.67772"	"188.0"	"100.000"	"46.7458"	"13996"	"13996"	"13981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.1"	""	"256.6"	""	"281.3"	""	"305.4"	"0.9"	"348.8"	"350.1"	""	"639"	"24"	"35.000"	"28.000"	"0.114675558119079"	""	"0.0001991"	"0.003871"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITSAYYR"	"[R].aITSAYYR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"587.32648"	"1173.64568"	"1173.64654"	"-0.73"	"-0.00043"	"5/58"	"5"	"58"	"3326204.66394043"	"HCD"	"MS2"	"14.20348"	"195.1"	"100.000"	"46.4281"	"13904"	"13904"	"13895"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"256.3"	""	"275.1"	""	"261.3"	""	"331.4"	"4.0"	"359.1"	"362.1"	""	"639"	"21"	"35.000"	"28.000"	"0.26882574775564"	""	"0.0001991"	"0.005254"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITSAYYR"	"[R].aITSAYYR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"587.32715"	"1173.64702"	"1173.64654"	"0.41"	"0.00024"	"7/58"	"7"	"58"	"4609865.37457275"	"HCD"	"MS2"	"22.88087"	"247.4"	"100.000"	"46.7170"	"14021"	"14021"	"14003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"319.1"	""	"320.0"	""	"317.7"	""	"403.4"	"5.0"	"482.1"	"500.5"	""	"652"	"40"	"35.000"	"28.000"	"0.00323755831785224"	""	"0.0001991"	"0.00322"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITSAYYR"	"[R].aITSAYYR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"587.32739"	"1173.64751"	"1173.64654"	"0.83"	"0.00048"	"7/58"	"7"	"58"	"4663575.86413574"	"HCD"	"MS2"	"16.86874"	"242.9"	"100.000"	"47.0532"	"14120"	"14120"	"14100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"315.1"	""	"309.1"	""	"322.4"	""	"383.5"	"8.3"	"481.6"	"484.9"	""	"652"	"40"	"35.000"	"28.000"	"0.00318579334031594"	""	"0.0001991"	"0.003327"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"587.36517"	"1173.72307"	"1173.72434"	"-1.09"	"-0.00064"	"6/52"	"6"	"52"	"1493430.0703125"	"HCD"	"MS2"	"11.30902"	"102.0"	"100.000"	"54.1392"	"17036"	"17036"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.3"	""	"132.0"	""	"146.3"	""	"162.7"	""	"188.3"	"187.5"	""	"500"	"44"	"33.000"	"26.000"	"0.00105181657096111"	""	"0.0001991"	"0.002076"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"587.36523"	"1173.72319"	"1173.72434"	"-0.98"	"-0.00058"	"6/52"	"6"	"52"	"11479721.9326782"	"HCD"	"MS2"	"1.734615"	"537.4"	"79.751"	"53.8311"	"16911"	"16911"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"753.2"	""	"729.4"	""	"810.3"	""	"818.7"	""	"926.7"	"1056.9"	""	"504"	"36"	"34.000"	"27.000"	"0.00702102534494702"	"26"	"0.002922"	"0.03131"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"587.36530"	"1173.72331"	"1173.72434"	"-0.88"	"-0.00052"	"6/52"	"6"	"52"	"2866423.00280762"	"HCD"	"MS2"	"13.47395"	"195.5"	"100.000"	"53.8768"	"16896"	"16896"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"282.3"	""	"288.3"	""	"285.0"	""	"328.0"	"4.1"	"327.0"	"335.1"	""	"504"	"35"	"34.000"	"27.000"	"0.00769840120530309"	"27"	"0.001872"	"0.01541"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"391.91266"	"1173.72342"	"1173.72434"	"-0.79"	"-0.00031"	"8/52"	"8"	"52"	"2778466.27319336"	"HCD"	"MS2"	"17.06184"	"153.9"	"100.000"	"53.8057"	"16900"	"16900"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.1"	""	"207.1"	""	"232.9"	""	"245.1"	""	"264.3"	"300.0"	""	"505"	"21"	"34.000"	"27.000"	"0.191100305992796"	"26"	"0.00329"	"0.03543"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"587.36542"	"1173.72356"	"1173.72434"	"-0.67"	"-0.00039"	"5/52"	"5"	"52"	"1010441.60626221"	"HCD"	"MS2"	"5.732629"	"75.0"	"100.000"	"54.5256"	"17160"	"17160"	"17142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.5"	""	"88.0"	""	"110.1"	""	"116.1"	"1.1"	"154.1"	"142.6"	""	"505"	"29"	"34.000"	"27.000"	"0.0293265774994687"	""	"0.002373"	"0.02256"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"587.36548"	"1173.72368"	"1173.72434"	"-0.57"	"-0.00033"	"6/52"	"6"	"52"	"10219097.3362427"	"HCD"	"MS2"	"2.081129"	"559.2"	"89.195"	"54.1898"	"17023"	"17023"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"770.3"	""	"748.8"	""	"824.1"	""	"876.3"	""	"998.1"	"1086.0"	""	"505"	"34"	"34.000"	"27.000"	"0.00993713940525839"	"27"	"0.002673"	"0.02809"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"391.91278"	"1173.72379"	"1173.72434"	"-0.47"	"-0.00019"	"8/52"	"8"	"52"	"2773740.62817383"	"HCD"	"MS2"	"15.97307"	"170.5"	"100.000"	"54.0909"	"16983"	"16983"	"16961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.2"	""	"253.1"	""	"241.2"	""	"287.0"	""	"294.5"	"312.4"	""	"505"	"24"	"34.000"	"27.000"	"0.0914663571002164"	""	"0.002328"	"0.02231"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGISPDK"	"[K].vGISPDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"587.36554"	"1173.72380"	"1173.72434"	"-0.46"	"-0.00027"	"6/52"	"6"	"52"	"2353049.72186279"	"HCD"	"MS2"	"22.58885"	"157.9"	"100.000"	"48.1090"	"14550"	"14550"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"210.5"	""	"212.5"	""	"214.8"	""	"252.2"	"0.2"	"286.1"	"320.1"	""	"505"	"18"	"34.000"	"27.000"	"0.370903885105076"	"24"	"0.006577"	"0.0813"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDLSPK"	"[R].vGDLSPk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1;SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q99MS0; Q9Z1J8"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1; SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"587.36560"	"1173.72392"	"1173.72434"	"-0.36"	"-0.00021"	"6/52"	"6"	"52"	"2534814.95410156"	"HCD"	"MS2"	"10.48339"	"163.5"	"100.000"	"53.5431"	"16793"	"16793"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"230.6"	""	"239.9"	""	"229.8"	""	"273.4"	"0.1"	"289.7"	"284.6"	""	"504"	"32"	"34.000"	"27.000"	"0.0151845015690738"	"24"	"0.001615"	"0.01436"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGISPDK"	"[K].vGISPDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"587.36591"	"1173.72453"	"1173.72434"	"0.16"	"0.00010"	"6/52"	"6"	"52"	"2489873.85540771"	"HCD"	"MS2"	"16.36103"	"165.2"	"100.000"	"47.7681"	"14449"	"14449"	"14426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.6"	""	"227.5"	""	"226.5"	""	"273.2"	"4.4"	"291.6"	"313.9"	""	"506"	"18"	"34.000"	"27.000"	"0.380294917420775"	"24"	"0.008289"	"0.1051"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDPVLK"	"[R].gSDPVLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q923V8"	"Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3"	"Q923V8"	"Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"587.36609"	"1173.72490"	"1173.72434"	"0.47"	"0.00028"	"6/50"	"6"	"50"	"3225614.23822021"	"HCD"	"MS2"	"2.509129"	"228.3"	"100.000"	"43.6422"	"12740"	"12740"	"12716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.1"	""	"310.0"	""	"323.4"	""	"383.6"	""	"416.5"	"416.3"	""	"493"	"36"	"33.000"	"26.000"	"0.00607878696628265"	"23"	"0.001049"	"0.008893"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDPVLK"	"[R].gSDPVLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q923V8"	"Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3"	"Q923V8"	"Selenoprotein F OS=Rattus norvegicus OX=10116 GN=Selenof PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"587.36621"	"1173.72515"	"1173.72434"	"0.68"	"0.00040"	"6/50"	"6"	"50"	"3704115.4119873"	"HCD"	"MS2"	"7.556325"	"260.4"	"100.000"	"43.3805"	"12668"	"12668"	"12651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"383.2"	""	"349.3"	""	"377.9"	""	"427.0"	""	"469.6"	"462.6"	""	"492"	"25"	"33.000"	"26.000"	"0.0716036411044386"	"22"	"0.002373"	"0.02259"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFNSYGSR"	"[R].dFNSYGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"587.78802"	"1174.56877"	"1174.56902"	"-0.21"	"-0.00012"	"6/78"	"6"	"78"	"2177227.19921875"	"HCD"	"MS2"	"34.27021"	"148.4"	"100.000"	"36.6357"	"9933"	"9933"	"9913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.7"	""	"194.4"	""	"206.6"	""	"229.4"	""	"263.8"	"276.9"	""	"287"	"22"	"31.000"	"24.000"	"0.100196349985074"	"21"	"0.0001991"	"0.005222"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFNSYGSR"	"[R].dFNSYGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"587.78821"	"1174.56914"	"1174.56902"	"0.10"	"0.00006"	"6/78"	"6"	"78"	"2356270.75463867"	"HCD"	"MS2"	"49.56706"	"153.8"	"100.000"	"36.7501"	"9942"	"9942"	"9918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.0"	""	"219.5"	""	"218.6"	""	"219.4"	""	"283.9"	"292.3"	""	"291"	"31"	"31.000"	"24.000"	"0.0115043740373975"	"22"	"0.0001991"	"0.002029"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIPFQLR"	"[K].nGIPFQLR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"587.84222"	"1174.67717"	"1174.67817"	"-0.85"	"-0.00050"	"7/72"	"7"	"72"	"3221192.32696533"	"HCD"	"MS2"	"10.46771"	"119.4"	"100.000"	"94.0783"	"33165"	"33165"	"33147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.6"	""	"146.3"	""	"175.9"	""	"186.0"	""	"210.2"	"242.2"	""	"921"	"18"	"36.000"	"29.000"	"0.755491590558387"	"25"	"0.001718"	"0.01495"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIPFQLR"	"[K].nGIPFQLR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"P30713"	"Glutathione S-transferase theta-2 OS=Rattus norvegicus OX=10116 GN=Gstt2 PE=1 SV=3"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"587.84241"	"1174.67754"	"1174.67817"	"-0.54"	"-0.00032"	"5/72"	"5"	"72"	"2987965.77270508"	"HCD"	"MS2"	"9.842796"	"106.8"	"100.000"	"94.0178"	"33176"	"33176"	"33158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.6"	""	"134.5"	""	"148.3"	""	"178.8"	""	"194.8"	"206.6"	""	"906"	"16"	"36.000"	"29.000"	"1.24766560261219"	"25"	"0.001488"	"0.0126"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIELAVMR"	"[K].nIELAVMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"587.84412"	"1174.68096"	"1174.68154"	"-0.50"	"-0.00029"	"7/70"	"7"	"70"	"1272830.9543457"	"HCD"	"MS2"	"14.56419"	"64.7"	"100.000"	"82.2845"	"28421"	"28421"	"28400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.4"	""	"75.5"	""	"96.0"	""	"103.4"	"0.3"	"130.6"	"122.5"	""	"910"	"35"	"36.000"	"29.000"	"0.0146896482537925"	"18"	"0.0001991"	"0.00278"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIELAVMR"	"[K].nIELAVMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"587.84430"	"1174.68132"	"1174.68154"	"-0.19"	"-0.00011"	"6/70"	"6"	"70"	"1679946.62664795"	"HCD"	"MS2"	"11.53586"	"87.6"	"100.000"	"81.9732"	"28322"	"28322"	"28307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.0"	""	"99.1"	""	"125.7"	""	"139.3"	"1.9"	"155.1"	"172.9"	""	"910"	"42"	"36.000"	"29.000"	"0.00279261712349982"	"24"	"0.0001686"	"0.001641"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIELAVMR"	"[K].nIELAVMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"587.84430"	"1174.68132"	"1174.68154"	"-0.19"	"-0.00011"	"6/70"	"6"	"70"	"1838835.80303955"	"HCD"	"MS2"	"8.823206"	"85.0"	"100.000"	"81.9365"	"28280"	"28280"	"28263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.8"	""	"101.7"	""	"116.9"	""	"138.7"	"2.4"	"161.8"	"160.7"	""	"910"	"42"	"36.000"	"29.000"	"0.00271651055395646"	"22"	"0.0001686"	"0.001862"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIELAVMR"	"[K].nIELAVMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"587.84442"	"1174.68157"	"1174.68154"	"0.02"	"0.00001"	"6/70"	"6"	"70"	"1552059.82312012"	"HCD"	"MS2"	"5.457845"	"79.2"	"100.000"	"82.2729"	"28445"	"28445"	"28428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.8"	""	"99.4"	""	"115.9"	""	"114.6"	""	"149.3"	"157.7"	""	"884"	"42"	"36.000"	"29.000"	"0.00284067971054123"	"21"	"0.0001686"	"0.001749"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPQPPTHR"	"[K].lPQPPTHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"392.23416"	"1174.68793"	"1174.68941"	"-1.26"	"-0.00049"	"8/66"	"8"	"66"	"2244739.91326904"	"HCD"	"MS2"	"36.23505"	"64.6"	"100.000"	"33.5291"	"8640"	"8640"	"8620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.8"	""	"110.5"	""	"65.6"	""	"105.7"	""	"101.9"	"112.5"	""	"772"	"16"	"35.000"	"28.000"	"0.898643225458694"	"14"	"0.001615"	"0.01465"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPQPPTHR"	"[K].lPQPPTHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"392.23474"	"1174.68967"	"1174.68941"	"0.22"	"0.00009"	"8/66"	"8"	"66"	"2207884.54956055"	"HCD"	"MS2"	"30.13497"	"62.9"	"100.000"	"33.4458"	"8644"	"8644"	"8623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.2"	""	"114.0"	""	"60.5"	""	"95.1"	"0.3"	"100.0"	"102.5"	""	"766"	"18"	"35.000"	"28.000"	"0.679514571180933"	"16"	"0.002189"	"0.02028"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISTLNGLR"	"[R].aISTLnGLR.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"3"	"587.85260"	"1174.69792"	"1174.69930"	"-1.17"	"-0.00069"	"7/72"	"7"	"72"	"389879.778625488"	"HCD"	"MS2"	"61.43068"	"34.4"	"100.000"	"70.7645"	"23749"	"23749"	"23727"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.9"	""	"44.0"	""	"39.1"	""	"70.6"	"0.7"	"58.5"	"61.8"	""	"623"	"14"	"34.000"	"27.000"	"1.29556155168888"	"22"	"0.0004582"	"0.006478"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISTLNGLR"	"[R].aISTLnGLR.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"3"	"587.85297"	"1174.69866"	"1174.69930"	"-0.55"	"-0.00032"	"5/72"	"5"	"72"	"479667.108520508"	"HCD"	"MS2"	"49.71811"	"34.2"	"100.000"	"70.9645"	"23862"	"23862"	"23839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"35.0"	""	"43.4"	""	"71.5"	""	"56.2"	"63.9"	""	"630"	"20"	"34.000"	"27.000"	"0.346186839421244"	"25"	"0.009275"	"0.1203"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISTLNGLR"	"[R].aISTLnGLR.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"587.85315"	"1174.69902"	"1174.69930"	"-0.24"	"-0.00014"	"7/72"	"7"	"72"	"643852.940307617"	"HCD"	"MS2"	"39.26508"	"36.0"	"100.000"	"73.6550"	"24951"	"24951"	"24928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.0"	""	"39.9"	""	"40.2"	""	"61.0"	""	"84.4"	"75.9"	""	"628"	"37"	"34.000"	"27.000"	"0.00599693923189799"	"17"	"0.0001991"	"0.002145"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISTLNGLR"	"[R].aISTLnGLR.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.85321"	"1174.69914"	"1174.69930"	"-0.14"	"-0.00008"	"7/72"	"7"	"72"	"624247.226867676"	"HCD"	"MS2"	"17.39848"	"39.3"	"100.000"	"73.4418"	"24835"	"24835"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.8"	""	"44.0"	""	"50.1"	""	"70.3"	""	"79.5"	"84.6"	""	"628"	"43"	"34.000"	"27.000"	"0.00158463647434948"	"15"	"0"	"0.00029"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGQEGK"	"[K].vVGQEGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"587.86298"	"1174.71868"	"1174.71959"	"-0.78"	"-0.00046"	"5/54"	"5"	"54"	"4695498.51989746"	"HCD"	"MS2"	"31.24269"	"294.4"	"100.000"	"33.6414"	"8686"	"8686"	"8664"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"412.1"	""	"384.6"	""	"361.1"	""	"497.6"	""	"577.7"	"566.3"	""	"466"	"20"	"33.000"	"26.000"	"0.23461507884247"	""	"0.003043"	"0.03261"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGQEGK"	"[K].vVGQEGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"587.86310"	"1174.71892"	"1174.71959"	"-0.57"	"-0.00034"	"5/54"	"5"	"54"	"4362341.04705811"	"HCD"	"MS2"	"29.81647"	"262.0"	"100.000"	"33.5193"	"8674"	"8674"	"8649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"378.1"	""	"317.7"	""	"340.9"	""	"433.3"	""	"509.4"	"505.8"	""	"466"	"18"	"33.000"	"26.000"	"0.392966854915576"	"22"	"0.003786"	"0.04038"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAAGK"	"[K].eLQAAGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"587.86310"	"1174.71892"	"1174.71959"	"-0.57"	"-0.00034"	"6/56"	"6"	"56"	"10247134.8440552"	"HCD"	"MS2"	"0"	"682.8"	"100.000"	"37.5951"	"10321"	"10321"	"10309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1121.2"	""	"786.4"	""	"838.4"	""	"1126.6"	"8.8"	"1166.1"	"1420.1"	""	"466"	"35"	"33.000"	"26.000"	"0.00813496935065105"	""	"0.001615"	"0.01362"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGQEGK"	"[K].vVGQEGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"587.86322"	"1174.71916"	"1174.71959"	"-0.37"	"-0.00022"	"5/54"	"5"	"54"	"1238058.53887939"	"HCD"	"MS2"	"33.25662"	"104.9"	"100.000"	"33.9377"	"8807"	"8807"	"8786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.3"	""	"142.0"	""	"149.6"	""	"174.0"	""	"187.8"	"189.4"	""	"466"	"19"	"33.000"	"26.000"	"0.322370966300425"	"25"	"0.002799"	"0.02956"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAAGK"	"[K].eLQAAGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"587.86334"	"1174.71941"	"1174.71959"	"-0.16"	"-0.00009"	"6/56"	"6"	"56"	"10460400.9933472"	"HCD"	"MS2"	"0"	"720.8"	"100.000"	"37.6941"	"10326"	"10326"	"10318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1188.6"	""	"830.6"	""	"884.7"	""	"1196.4"	"11.1"	"1230.1"	"1486.3"	""	"466"	"33"	"33.000"	"26.000"	"0.0115972740800092"	"25"	"0.001615"	"0.01465"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNPDMR"	"[K].sINNPDMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"588.30536"	"1175.60344"	"1175.60402"	"-0.49"	"-0.00029"	"7/76"	"7"	"76"	"4175839.46051025"	"HCD"	"MS2"	"38.93995"	"261.5"	"100.000"	"32.7523"	"8324"	"8324"	"8298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"409.6"	""	"359.3"	""	"364.3"	""	"463.0"	"4.3"	"436.8"	"436.4"	""	"552"	"18"	"34.000"	"27.000"	"0.43342013399606"	"17"	"0.00394"	"0.04345"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAFLAGR"	"[R].nTPAFLAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"588.34033"	"1175.67339"	"1175.67342"	"-0.03"	"-0.00002"	"6/80"	"6"	"80"	"1822702.77130127"	"HCD"	"MS2"	"23.26709"	"137.0"	"100.000"	"55.9120"	"17755"	"17755"	"17744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.4"	""	"192.4"	""	"177.0"	""	"217.8"	"1.7"	"260.4"	"256.6"	""	"720"	"32"	"35.000"	"28.000"	"0.0247914826683939"	"28"	"0.0009964"	"0.00846"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAFLAGR"	"[R].nTPAFLAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"588.34088"	"1175.67449"	"1175.67342"	"0.90"	"0.00053"	"8/80"	"8"	"80"	"1633006.27093506"	"HCD"	"MS2"	"18.56703"	"132.6"	"100.000"	"56.2662"	"17864"	"17864"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.4"	""	"172.8"	""	"187.5"	""	"207.0"	""	"248.1"	"253.8"	""	"715"	"19"	"35.000"	"28.000"	"0.451103343616165"	"27"	"0.0001991"	"0.003849"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILSEER"	"[K].lSILSEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"588.34473"	"1175.68218"	"1175.68332"	"-0.97"	"-0.00057"	"7/66"	"7"	"66"	"1347990.56921387"	"HCD"	"MS2"	"16.69143"	"63.8"	"100.000"	"76.2466"	"25973"	"25973"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.4"	""	"85.6"	""	"75.7"	""	"94.3"	"0.8"	"124.2"	"140.3"	""	"644"	"42"	"35.000"	"28.000"	"0.00227958542571692"	"25"	"9.9E-05"	"0.0007813"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILSEER"	"[K].lSILSEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"588.34497"	"1175.68266"	"1175.68332"	"-0.56"	"-0.00033"	"7/66"	"7"	"66"	"1651279.96966553"	"HCD"	"MS2"	"3.155668"	"78.1"	"100.000"	"76.3513"	"26047"	"26047"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.3"	""	"104.6"	""	"92.5"	""	"120.1"	""	"145.5"	"167.5"	""	"669"	"38"	"35.000"	"28.000"	"0.00500490826963588"	"25"	"0.0001991"	"0.002218"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILSEER"	"[K].lSILSEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"588.34509"	"1175.68291"	"1175.68332"	"-0.35"	"-0.00020"	"7/66"	"7"	"66"	"7333596.35174561"	"HCD"	"MS2"	"16.05181"	"346.8"	"100.000"	"76.5346"	"26090"	"26090"	"26077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"416.7"	""	"451.0"	""	"449.9"	""	"527.5"	""	"679.2"	"781.1"	""	"669"	"35"	"35.000"	"28.000"	"0.0111274620576844"	"25"	"0.0001991"	"0.005746"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILSEER"	"[K].lSILSEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"588.34528"	"1175.68328"	"1175.68332"	"-0.04"	"-0.00002"	"7/66"	"7"	"66"	"9050311.25543213"	"HCD"	"MS2"	"22.2853"	"458.8"	"100.000"	"76.6530"	"26170"	"26170"	"26153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"567.9"	""	"601.0"	""	"570.4"	""	"733.1"	""	"885.0"	"1007.7"	""	"670"	"44"	"35.000"	"28.000"	"0.00135845359375208"	"25"	"0.0001991"	"0.003511"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEAEAK"	"[R].iGEAEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"588.35443"	"1175.70159"	"1175.70361"	"-1.72"	"-0.00101"	"6/52"	"6"	"52"	"3363502.47909546"	"HCD"	"MS2"	"0"	"271.3"	"100.000"	"39.0471"	"10878"	"10878"	"10857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"280.5"	""	"269.1"	""	"305.5"	""	"498.3"	"3.1"	"614.1"	"611.4"	""	"535"	"24"	"34.000"	"27.000"	"0.112544373092839"	"26"	"0.002525"	"0.02482"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEAEAK"	"[R].iGEAEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"588.35468"	"1175.70207"	"1175.70361"	"-1.31"	"-0.00077"	"6/52"	"6"	"52"	"3412530.32800293"	"HCD"	"MS2"	"0"	"268.0"	"100.000"	"38.9644"	"10880"	"10880"	"10861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"270.1"	""	"273.9"	""	"287.2"	""	"490.7"	"8.3"	"626.3"	"594.3"	""	"513"	"25"	"34.000"	"27.000"	"0.0857210277666982"	"26"	"0.003317"	"0.03707"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLVDEK"	"[R].gGLVDEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9EQH5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2"	"Q9EQH5; Q9Z2F5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"588.35474"	"1175.70220"	"1175.70361"	"-1.20"	"-0.00071"	"6/50"	"6"	"50"	"4687437.48120117"	"HCD"	"MS2"	"25.34328"	"373.4"	"100.000"	"43.1044"	"12520"	"12520"	"12498"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"577.4"	""	"441.6"	""	"469.0"	""	"640.5"	""	"707.4"	"707.5"	""	"513"	"34"	"34.000"	"27.000"	"0.0101411538047475"	"26"	"0.00212"	"0.01912"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLVDEK"	"[R].gGLVDEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9EQH5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2"	"Q9EQH5; Q9Z2F5"	"C-terminal-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Ctbp2 PE=1 SV=2; C-terminal-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ctbp1 PE=1 SV=3"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"588.35486"	"1175.70244"	"1175.70361"	"-0.99"	"-0.00058"	"6/50"	"6"	"50"	"3951034.9887085"	"HCD"	"MS2"	"23.76203"	"310.3"	"100.000"	"42.9226"	"12480"	"12480"	"12459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"429.8"	""	"371.2"	""	"403.7"	""	"519.3"	"2.5"	"611.3"	"605.2"	""	"519"	"36"	"34.000"	"27.000"	"0.00690458153017791"	""	"0.001049"	"0.008579"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDILGK"	"[R].dGDILGk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"P26772"	"10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"588.35522"	"1175.70317"	"1175.70361"	"-0.37"	"-0.00022"	"4/52"	"4"	"52"	"1296981.55950928"	"HCD"	"MS2"	"33.99403"	"99.1"	"100.000"	"61.8564"	"20166"	"20166"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.9"	""	"108.3"	""	"119.3"	""	"179.7"	""	"173.9"	"202.2"	""	"528"	"19"	"34.000"	"27.000"	"0.327042298844017"	"20"	"0.001827"	"0.01533"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSANLK"	"[R].aNSANLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"588.36115"	"1175.71501"	"1175.71484"	"0.15"	"0.00009"	"6/58"	"6"	"58"	"9163407.45574951"	"HCD"	"MS2"	"2.829213"	"663.6"	"100.000"	"31.7221"	"7909"	"7909"	"7889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1096.4"	""	"819.3"	""	"908.7"	""	"1035.0"	"0.3"	"1133.1"	"1289.5"	""	"431"	"35"	"33.000"	"26.000"	"0.00725182432004182"	""	"0.002711"	"0.02864"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSANLK"	"[R].aNSANLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"588.36127"	"1175.71526"	"1175.71484"	"0.35"	"0.00021"	"10/58"	"10"	"58"	"9008229.08001709"	"HCD"	"MS2"	"2.349497"	"652.5"	"100.000"	"31.5881"	"7892"	"7892"	"7876"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1089.1"	""	"846.5"	""	"869.4"	""	"987.7"	""	"1114.7"	"1276.6"	""	"431"	"27"	"33.000"	"26.000"	"0.039124362532761"	"19"	"0.003317"	"0.0366"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSTVLTAQK"	"[R].VSTVLTAQk.[D]"	"K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"588.36414"	"1175.72099"	"1175.71970"	"1.10"	"0.00065"	"6/74"	"6"	"74"	"2959089.73150635"	"HCD"	"MS2"	"0"	"161.0"	"100.000"	"39.2830"	"10974"	"10974"	"10960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.7"	""	"201.4"	""	"197.8"	""	"271.6"	""	"337.8"	"329.3"	""	"398"	"43"	"32.000"	"25.000"	"0.000952473883722051"	"21"	"0.0001991"	"0.004049"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGEVAK"	"[K].lTGEVAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"588.37292"	"1175.73857"	"1175.73999"	"-1.21"	"-0.00071"	"5/52"	"5"	"52"	"2062975.63946533"	"HCD"	"MS2"	"23.86408"	"165.4"	"100.000"	"48.5543"	"14731"	"14731"	"14718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.3"	""	"223.3"	""	"215.2"	""	"283.8"	""	"297.0"	"315.6"	""	"248"	"21"	"30.000"	"23.000"	"0.105056199353434"	"22"	"0.00192"	"0.01607"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEVGSK"	"[K].vVEVGSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"588.37335"	"1175.73943"	"1175.73999"	"-0.48"	"-0.00028"	"5/54"	"5"	"54"	"3169196.64202881"	"HCD"	"MS2"	"55.77827"	"267.8"	"100.000"	"47.5701"	"14368"	"14368"	"14347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"363.0"	""	"335.3"	""	"341.2"	""	"380.7"	""	"535.4"	"591.3"	""	"250"	"11"	"30.000"	"23.000"	"0.916030666423629"	"17"	"0.006845"	"0.08601"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASGLLK"	"[R].qASGLLk.[R]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"588.37347"	"1175.73967"	"1175.74000"	"-0.28"	"-0.00016"	"6/60"	"6"	"60"	"1350870.30126953"	"HCD"	"MS2"	"24.25027"	"115.0"	"100.000"	"50.6104"	"15603"	"15603"	"15583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.9"	""	"141.1"	""	"154.5"	""	"202.3"	"2.6"	"240.5"	"216.0"	""	"250"	"14"	"30.000"	"23.000"	"0.456993489516406"	"21"	"0.00455"	"0.05349"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEVGSK"	"[K].vVEVGSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"588.37354"	"1175.73979"	"1175.73999"	"-0.17"	"-0.00010"	"6/54"	"6"	"54"	"6737131.04681396"	"HCD"	"MS2"	"50.57767"	"494.4"	"100.000"	"46.8547"	"14077"	"14077"	"14064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"748.3"	""	"692.5"	""	"657.5"	""	"750.0"	""	"872.3"	"965.3"	""	"250"	"30"	"30.000"	"23.000"	"0.0112178599312594"	"21"	"0.001951"	"0.01668"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEVGSK"	"[K].vVEVGSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"588.37366"	"1175.74004"	"1175.73999"	"0.04"	"0.00002"	"6/54"	"6"	"54"	"7197656.02062988"	"HCD"	"MS2"	"50.49778"	"516.6"	"100.000"	"47.1817"	"14173"	"14173"	"14158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"800.7"	""	"717.9"	""	"692.7"	""	"773.9"	""	"930.5"	"981.2"	""	"250"	"30"	"30.000"	"23.000"	"0.011452756126525"	"20"	"0.002559"	"0.0256"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VVEVGSK"	"[K].vVEVGSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"588.37378"	"1175.74028"	"1175.73999"	"0.24"	"0.00014"	"5/54"	"5"	"54"	"3292423.79742432"	"HCD"	"MS2"	"64.4612"	"280.5"	"100.000"	"47.9176"	"14472"	"14472"	"14453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"404.5"	""	"352.7"	""	"378.1"	""	"383.9"	""	"563.0"	"581.1"	""	"250"	"5"	"30.000"	"23.000"	"3.61334985295684"	"18"	"0.009674"	"0.1289"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTGEVAK"	"[K].lTGEVAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"588.37396"	"1175.74065"	"1175.73999"	"0.56"	"0.00033"	"5/52"	"5"	"52"	"1795472.39550781"	"HCD"	"MS2"	"23.1452"	"144.8"	"100.000"	"48.1676"	"14612"	"14612"	"14593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.8"	""	"190.8"	""	"198.6"	""	"256.4"	""	"238.0"	"274.8"	""	"248"	"13"	"30.000"	"23.000"	"0.69250304147367"	""	"0.002525"	"0.02473"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLVEGGAPR"	"[R].cLVEGGAPR.[T]"	"N-Term(TMT6plex); C1(Methylthio)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"588.80322"	"1176.59917"	"1176.60667"	"-6.37"	"-0.00375"	"8/64"	"8"	"64"	"3787158.50457764"	"HCD"	"MS2"	"0"	"208.8"	"100.000"	"55.3138"	"17516"	"17516"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"289.2"	""	"299.2"	""	"298.5"	""	"335.7"	""	"372.1"	"386.6"	""	"497"	"47"	"33.000"	"26.000"	"0.000555042697373387"	""	"9.9E-05"	"0.0007439"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLVEGGAPR"	"[R].cLVEGGAPR.[T]"	"N-Term(TMT6plex); C1(Methylthio)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"588.80499"	"1176.60271"	"1176.60667"	"-3.36"	"-0.00198"	"8/64"	"8"	"64"	"3749832.79302979"	"HCD"	"MS2"	"25.85302"	"194.0"	"100.000"	"55.6568"	"17622"	"17622"	"17592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"277.1"	""	"266.5"	""	"281.6"	""	"302.3"	""	"337.4"	"374.7"	""	"536"	"41"	"34.000"	"27.000"	"0.00190605221659092"	""	"9.9E-05"	"0.0006131"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CLVEGGAPR"	"[R].cLVEGGAPR.[T]"	"N-Term(TMT6plex); C1(Methylthio)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"588.80609"	"1176.60491"	"1176.60667"	"-1.50"	"-0.00088"	"6/64"	"6"	"64"	"3422781.52264404"	"HCD"	"MS2"	"5.710348"	"209.6"	"100.000"	"55.5867"	"17626"	"17626"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.4"	""	"290.3"	""	"316.3"	""	"321.6"	""	"402.5"	"400.4"	""	"541"	"37"	"34.000"	"27.000"	"0.00601405325421204"	"19"	"0"	"0.0003805"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFPNTNR"	"[R].qAFPNTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"588.81964"	"1176.63201"	"1176.63229"	"-0.24"	"-0.00014"	"7/70"	"7"	"70"	"2753264.13085938"	"HCD"	"MS2"	"0"	"149.0"	"100.000"	"30.1194"	"7310"	"7310"	"7295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.6"	""	"160.4"	""	"197.3"	""	"258.2"	""	"288.4"	"280.6"	""	"777"	"32"	"35.000"	"28.000"	"0.0244000672398974"	"26"	"0.0001991"	"0.004484"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFPNTNR"	"[R].qAFPNTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"588.81976"	"1176.63225"	"1176.63229"	"-0.03"	"-0.00002"	"7/70"	"7"	"70"	"3510933.64764404"	"HCD"	"MS2"	"0"	"175.2"	"100.000"	"30.2284"	"7314"	"7314"	"7302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"282.5"	""	"191.6"	""	"216.1"	""	"307.1"	""	"327.9"	"335.4"	""	"781"	"41"	"35.000"	"28.000"	"0.0034404958490963"	"24"	"0.0001686"	"0.001944"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNVVNTMR"	"[R].nNVVNTMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"588.82098"	"1176.63469"	"1176.63566"	"-0.82"	"-0.00048"	"6/70"	"6"	"70"	"1322587.51226807"	"HCD"	"MS2"	"16.13295"	"86.2"	"100.000"	"31.2027"	"7741"	"7741"	"7716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.1"	""	"101.8"	""	"91.2"	""	"87.2"	"1.6"	"109.6"	"288.6"	""	"782"	"40"	"35.000"	"28.000"	"0.00419929860225427"	"22"	"0.0001991"	"0.002314"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNVVNTMR"	"[R].nNVVNTMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"588.82172"	"1176.63616"	"1176.63566"	"0.42"	"0.00025"	"6/70"	"6"	"70"	"1275521.96234131"	"HCD"	"MS2"	"32.9182"	"85.8"	"100.000"	"31.3199"	"7746"	"7746"	"7722"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.0"	""	"98.1"	""	"101.3"	""	"87.2"	"2.5"	"119.2"	"258.6"	""	"781"	"40"	"35.000"	"28.000"	"0.00424249206022464"	"19"	"0.0001686"	"0.001338"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"588.82385"	"1176.64043"	"1176.64218"	"-1.49"	"-0.00088"	"8/74"	"8"	"74"	"2510962.32543945"	"HCD"	"MS2"	"10.22995"	"149.8"	"100.000"	"40.3860"	"11419"	"11419"	"11389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.8"	""	"197.6"	""	"198.9"	""	"253.9"	"0.3"	"285.7"	"271.6"	""	"824"	"46"	"36.000"	"29.000"	"0.00110381734982544"	""	"0"	"8.723E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"588.82458"	"1176.64189"	"1176.64218"	"-0.25"	"-0.00014"	"8/74"	"8"	"74"	"2411534.28381348"	"HCD"	"MS2"	"0"	"146.1"	"100.000"	"40.2879"	"11413"	"11413"	"11386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.8"	""	"170.4"	""	"205.5"	""	"240.5"	"1.1"	"271.0"	"295.2"	""	"791"	"46"	"35.000"	"28.000"	"0.00106941553300505"	""	"0"	"8.963E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"588.82458"	"1176.64189"	"1176.64218"	"-0.25"	"-0.00014"	"8/74"	"8"	"74"	"3544604.20245361"	"HCD"	"MS2"	"5.41028"	"203.0"	"100.000"	"40.6847"	"11539"	"11539"	"11518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"286.3"	""	"251.8"	""	"272.4"	""	"345.5"	""	"369.5"	"401.1"	""	"791"	"46"	"35.000"	"28.000"	"0.00101893501759452"	""	"0"	"0.0002971"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEISGDLAR"	"[K].sEISGDLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"588.82471"	"1176.64214"	"1176.64218"	"-0.04"	"-0.00002"	"8/74"	"8"	"74"	"3741288.12493896"	"HCD"	"MS2"	"16.63704"	"225.8"	"100.000"	"40.5983"	"11539"	"11539"	"11521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"318.5"	""	"310.4"	""	"288.2"	""	"363.7"	""	"402.7"	"460.4"	""	"804"	"37"	"36.000"	"29.000"	"0.00752014220427052"	""	"9.9E-05"	"0.0004233"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"588.82483"	"1176.64238"	"1176.64218"	"0.17"	"0.00010"	"7/72"	"7"	"72"	"2468585.42657471"	"HCD"	"MS2"	"29.46028"	"186.2"	"100.000"	"46.5809"	"13931"	"13931"	"13920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.3"	""	"220.3"	""	"234.4"	""	"296.1"	""	"383.9"	"380.2"	""	"804"	"34"	"36.000"	"29.000"	"0.0144619232732608"	"27"	"0"	"0.0003528"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"588.82489"	"1176.64250"	"1176.64218"	"0.27"	"0.00016"	"6/72"	"6"	"72"	"5826288.82525635"	"HCD"	"MS2"	"22.62657"	"338.4"	"100.000"	"46.3093"	"13826"	"13826"	"13818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"466.7"	""	"415.3"	""	"424.5"	""	"565.5"	""	"642.5"	"697.6"	""	"804"	"35"	"36.000"	"29.000"	"0.012196242560461"	"28"	"9.9E-05"	"0.0006385"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELSGGR"	"[K].lSEELSGGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"588.82538"	"1176.64348"	"1176.64218"	"1.10"	"0.00065"	"8/72"	"8"	"72"	"6338792.69592285"	"HCD"	"MS2"	"20.66077"	"341.3"	"100.000"	"46.0708"	"13763"	"13763"	"13749"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"478.7"	""	"389.0"	""	"456.8"	""	"560.4"	""	"653.2"	"702.1"	""	"798"	"38"	"36.000"	"29.000"	"0.00586101584779903"	"27"	"9.9E-05"	"0.0008756"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVINMPR"	"[R].tTVINmPR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"588.83350"	"1176.65972"	"1176.66081"	"-0.93"	"-0.00055"	"7/64"	"7"	"64"	"2215767.94927979"	"HCD"	"MS2"	"13.94285"	"118.2"	"100.000"	"32.5846"	"8257"	"8257"	"8246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.0"	""	"124.8"	""	"116.0"	""	"291.2"	""	"226.4"	"237.6"	""	"776"	"22"	"35.000"	"28.000"	"0.21869141046047"	"22"	"0.007342"	"0.09295"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVINMPR"	"[R].tTVINmPR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"588.83356"	"1176.65984"	"1176.66081"	"-0.83"	"-0.00049"	"7/64"	"7"	"64"	"2184870.57617188"	"HCD"	"MS2"	"14.07271"	"118.2"	"100.000"	"32.4790"	"8250"	"8250"	"8236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.4"	""	"118.6"	""	"129.8"	""	"294.8"	""	"226.3"	"229.7"	""	"779"	"22"	"35.000"	"28.000"	"0.220042951689392"	"26"	"0.004234"	"0.04964"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVINMPR"	"[R].tTVINmPR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"588.83386"	"1176.66045"	"1176.66081"	"-0.31"	"-0.00018"	"6/64"	"6"	"64"	"2403279.68029785"	"HCD"	"MS2"	"40.5002"	"152.9"	"100.000"	"32.3022"	"8143"	"8143"	"8119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.0"	""	"165.6"	""	"191.6"	""	"305.4"	"0.1"	"291.1"	"305.5"	""	"781"	"15"	"35.000"	"28.000"	"1.23771609431848"	"19"	"0.004819"	"0.05743"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVINMPR"	"[R].tTVINmPR.[E]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"P26376"	"Interferon-induced transmembrane protein 3 OS=Rattus norvegicus OX=10116 GN=ifitm3 PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"588.83423"	"1176.66118"	"1176.66081"	"0.32"	"0.00019"	"6/64"	"6"	"64"	"2540795.74871826"	"HCD"	"MS2"	"49.16093"	"115.7"	"100.000"	"32.1713"	"8127"	"8127"	"8106"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.6"	""	"132.5"	""	"150.1"	""	"215.3"	"0.0"	"220.0"	"234.5"	""	"765"	"17"	"35.000"	"28.000"	"0.710610204072575"	"19"	"0.004819"	"0.05827"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVNGEK"	"[K].gDVNGEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P30710; P23764"	"Epididymal secretory glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx5 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"588.83435"	"1176.66142"	"1176.66247"	"-0.89"	"-0.00052"	"6/62"	"6"	"62"	"1668175.6763916"	"HCD"	"MS2"	"15.62452"	"144.1"	"100.000"	"25.6994"	"5511"	"5511"	"5492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.2"	""	"162.0"	""	"166.0"	""	"241.0"	""	"298.4"	"304.7"	""	"784"	"20"	"35.000"	"28.000"	"0.433796523319245"	"24"	"0.002525"	"0.02391"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVNGEK"	"[K].gDVNGEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P30710; P23764"	"Epididymal secretory glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx5 PE=2 SV=1; Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"588.83490"	"1176.66252"	"1176.66247"	"0.04"	"0.00003"	"10/62"	"10"	"62"	"1962937.1696167"	"HCD"	"MS2"	"33.81755"	"164.3"	"100.000"	"25.5388"	"5485"	"5485"	"5458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.4"	""	"160.6"	""	"191.7"	""	"295.9"	""	"339.6"	"351.5"	""	"822"	"27"	"36.000"	"29.000"	"0.0917998183583348"	"27"	"0.002166"	"0.01997"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"588.85089"	"1176.69451"	"1176.69886"	"-3.70"	"-0.00218"	"7/60"	"7"	"60"	"28976079.7819824"	"HCD"	"MS2"	"10.94526"	"1357.0"	"59.158"	"31.8368"	"7956"	"7956"	"7937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1979.8"	""	"1855.7"	""	"1908.2"	""	"2062.9"	""	"2458.0"	"2594.2"	""	"597"	"37"	"34.000"	"27.000"	"0.00576692542629552"	""	"0.000264"	"0.006"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"588.85242"	"1176.69756"	"1176.69886"	"-1.11"	"-0.00065"	"6/60"	"6"	"60"	"4454981.57220459"	"HCD"	"MS2"	"23.38298"	"289.1"	"100.000"	"32.0155"	"8065"	"8065"	"8052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"382.7"	""	"375.5"	""	"365.2"	""	"508.5"	""	"543.0"	"571.8"	""	"560"	"21"	"34.000"	"27.000"	"0.223438512435033"	"22"	"0.002286"	"0.02164"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGSGELK"	"[K].gAGSGELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"588.85248"	"1176.69768"	"1176.69886"	"-1.00"	"-0.00059"	"6/60"	"6"	"60"	"35664288.855835"	"HCD"	"MS2"	"0"	"1378.2"	"51.612"	"31.7335"	"7952"	"7952"	"7935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1983.9"	""	"1896.3"	""	"1878.8"	""	"2108.7"	""	"2502.6"	"2704.1"	""	"568"	"35"	"34.000"	"27.000"	"0.00887806540263204"	""	"0.0001991"	"0.005687"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGAEGTK"	"[K].vGGAEGTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35179; O35964"	"Endophilin-A1 OS=Rattus norvegicus OX=10116 GN=Sh3gl2 PE=1 SV=2; Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"588.85278"	"1176.69829"	"1176.69886"	"-0.48"	"-0.00028"	"7/60"	"7"	"60"	"3289205.62243652"	"HCD"	"MS2"	"0"	"240.5"	"100.000"	"28.7977"	"6776"	"6776"	"6748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.1"	""	"242.5"	""	"280.2"	""	"480.1"	""	"531.3"	"498.9"	""	"568"	"39"	"34.000"	"27.000"	"0.0036586287268085"	"24"	"0.0001991"	"0.002306"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGAEGTK"	"[K].vGGAEGTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35179; O35964"	"Endophilin-A1 OS=Rattus norvegicus OX=10116 GN=Sh3gl2 PE=1 SV=2; Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"588.85309"	"1176.69890"	"1176.69886"	"0.04"	"0.00002"	"7/60"	"7"	"60"	"3553313.49401855"	"HCD"	"MS2"	"0"	"269.2"	"100.000"	"29.0121"	"6822"	"6822"	"6795"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"284.7"	""	"271.3"	""	"329.4"	""	"531.7"	""	"572.2"	"570.9"	""	"598"	"41"	"34.000"	"27.000"	"0.00259819168356604"	"24"	"0.0001686"	"0.001879"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"589.31140"	"1177.61553"	"1177.61630"	"-0.66"	"-0.00039"	"6/76"	"6"	"76"	"6281130.15600586"	"HCD"	"MS2"	"12.19349"	"329.9"	"100.000"	"37.3636"	"10192"	"10192"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"413.5"	""	"408.9"	""	"479.3"	""	"554.1"	""	"635.9"	"641.0"	""	"660"	"34"	"35.000"	"28.000"	"0.0142401295353163"	"27"	"0.002189"	"0.02069"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"589.31158"	"1177.61589"	"1177.61630"	"-0.35"	"-0.00020"	"6/76"	"6"	"76"	"6982006.9786377"	"HCD"	"MS2"	"30.9312"	"438.2"	"100.000"	"37.6596"	"10312"	"10312"	"10300"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"570.4"	""	"517.6"	""	"561.6"	""	"759.8"	""	"790.4"	"973.5"	""	"658"	"26"	"35.000"	"28.000"	"0.0879419108450229"	""	"0.003818"	"0.04128"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"589.31201"	"1177.61675"	"1177.61630"	"0.38"	"0.00022"	"6/76"	"6"	"76"	"5441578.48474121"	"HCD"	"MS2"	"12.41857"	"300.5"	"100.000"	"37.2607"	"10187"	"10187"	"10169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"391.6"	""	"377.6"	""	"428.4"	""	"498.2"	""	"578.2"	"577.0"	""	"657"	"34"	"35.000"	"28.000"	"0.0146735560021591"	"25"	"0.001951"	"0.01651"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSPENAAGR"	"[R].fSPENAAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"589.31207"	"1177.61687"	"1177.61630"	"0.48"	"0.00028"	"6/76"	"6"	"76"	"6839243.21118164"	"HCD"	"MS2"	"32.64953"	"448.6"	"100.000"	"37.5652"	"10310"	"10310"	"10296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"551.6"	""	"577.2"	""	"578.9"	""	"766.6"	""	"811.3"	"986.3"	""	"657"	"23"	"35.000"	"28.000"	"0.156507579165579"	""	"0.004213"	"0.04655"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"589.32349"	"1177.63970"	"1177.64145"	"-1.49"	"-0.00088"	"7/66"	"7"	"66"	"1007394.54534912"	"HCD"	"MS2"	"0"	"56.2"	"100.000"	"66.2046"	"21901"	"21901"	"21881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.4"	""	"83.3"	""	"72.4"	""	"89.9"	""	"112.5"	"102.0"	""	"705"	"26"	"35.000"	"28.000"	"0.0863294792750273"	"18"	"0.001348"	"0.01134"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"589.32397"	"1177.64067"	"1177.64145"	"-0.66"	"-0.00039"	"4/66"	"4"	"66"	"3562397.37902832"	"HCD"	"MS2"	"44.77273"	"149.5"	"100.000"	"65.5833"	"21647"	"21647"	"21631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.6"	""	"193.0"	""	"200.2"	""	"260.8"	""	"283.0"	"275.4"	""	"692"	"23"	"35.000"	"28.000"	"0.173410782835036"	"19"	"0.0001991"	"0.003468"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"589.32404"	"1177.64079"	"1177.64145"	"-0.56"	"-0.00033"	"5/66"	"5"	"66"	"6466792.25732422"	"HCD"	"MS2"	"9.766062"	"265.1"	"100.000"	"65.8010"	"21770"	"21770"	"21757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"312.6"	""	"350.9"	""	"381.5"	""	"488.5"	""	"491.1"	"491.7"	""	"688"	"39"	"35.000"	"28.000"	"0.00466185157848756"	"25"	"0.0001686"	"0.001461"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"589.32440"	"1177.64153"	"1177.64145"	"0.06"	"0.00004"	"5/66"	"5"	"66"	"6236707.00317383"	"HCD"	"MS2"	"5.955178"	"253.0"	"100.000"	"65.8826"	"21770"	"21770"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"305.6"	""	"330.5"	""	"341.1"	""	"446.6"	""	"505.0"	"474.1"	""	"687"	"43"	"35.000"	"28.000"	"0.00185321898833946"	"25"	"0.0001991"	"0.002246"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"589.32446"	"1177.64165"	"1177.64145"	"0.17"	"0.00010"	"5/66"	"5"	"66"	"2028504.97668457"	"HCD"	"MS2"	"2.524479"	"99.0"	"100.000"	"66.1140"	"21897"	"21897"	"21878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.6"	""	"131.5"	""	"131.2"	""	"178.2"	""	"183.6"	"198.1"	""	"688"	"38"	"35.000"	"28.000"	"0.00545203258206623"	"21"	"0.0001686"	"0.001487"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPAELR"	"[R].dFTPAELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"P70580"	"Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus OX=10116 GN=Pgrmc1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"589.32507"	"1177.64287"	"1177.64145"	"1.20"	"0.00071"	"5/66"	"5"	"66"	"2351140.69067383"	"HCD"	"MS2"	"55.22066"	"108.1"	"100.000"	"65.5221"	"21656"	"21656"	"21632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.2"	""	"144.9"	""	"142.1"	""	"190.7"	""	"201.2"	"200.3"	""	"688"	"18"	"35.000"	"28.000"	"0.597803485089785"	"23"	"0.00192"	"0.01585"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEAMTER"	"[R].vLEAMTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"589.32544"	"1177.64360"	"1177.64482"	"-1.04"	"-0.00061"	"7/64"	"7"	"64"	"1928842.31506348"	"HCD"	"MS2"	"43.13634"	"107.7"	"100.000"	"64.3974"	"21197"	"21197"	"21179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.5"	""	"150.8"	""	"153.6"	""	"144.3"	""	"201.9"	"205.9"	""	"685"	"14"	"35.000"	"28.000"	"1.32635743385654"	"24"	"0.001049"	"0.008608"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEAMTER"	"[R].vLEAMTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"589.32562"	"1177.64397"	"1177.64482"	"-0.73"	"-0.00043"	"6/64"	"6"	"64"	"2128189.20611572"	"HCD"	"MS2"	"44.03559"	"126.4"	"100.000"	"64.3462"	"21143"	"21143"	"21124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.3"	""	"170.5"	""	"181.5"	""	"175.5"	""	"244.2"	"234.1"	""	"707"	"21"	"35.000"	"28.000"	"0.293352246316349"	"20"	"0.0001991"	"0.005012"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMAGPK"	"[R].tDMAGPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"589.33527"	"1177.66326"	"1177.66512"	"-1.58"	"-0.00093"	"10/50"	"10"	"50"	"1184994.17388916"	"HCD"	"MS2"	"21.58639"	"104.8"	"100.000"	"36.6443"	"9899"	"9899"	"9879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.8"	""	"134.4"	""	"145.1"	""	"137.3"	"1.1"	"207.5"	"219.7"	""	"694"	"28"	"35.000"	"28.000"	"0.0532512093031355"	"22"	"0.002559"	"0.02533"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMAGPK"	"[R].tDMAGPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"589.33557"	"1177.66387"	"1177.66512"	"-1.06"	"-0.00062"	"6/50"	"6"	"50"	"1450542.01824951"	"HCD"	"MS2"	"7.869836"	"118.3"	"100.000"	"36.5025"	"9879"	"9879"	"9860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.2"	""	"159.7"	""	"145.5"	""	"144.6"	""	"244.7"	"258.8"	""	"691"	"33"	"35.000"	"28.000"	"0.0162348414523102"	"22"	"0.002628"	"0.02749"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILEFAER"	"[K].aILEFAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"589.34167"	"1177.67607"	"1177.67784"	"-1.50"	"-0.00088"	"6/62"	"6"	"62"	"454520.335266113"	"HCD"	"MS2"	"24.5069"	"28.2"	"100.000"	"92.7924"	"32645"	"32645"	"32624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"36.8"	""	"41.2"	""	"49.7"	"0.9"	"52.2"	"50.5"	""	"700"	"32"	"35.000"	"28.000"	"0.0246642574138501"	"19"	"0.0001686"	"0.001298"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILEFAER"	"[K].aILEFAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"589.34186"	"1177.67644"	"1177.67784"	"-1.19"	"-0.00070"	"6/62"	"6"	"62"	"445790.200805664"	"HCD"	"MS2"	"40.04083"	"29.6"	"100.000"	"92.7198"	"32657"	"32657"	"32632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"41.0"	""	"46.6"	""	"45.0"	""	"51.0"	"55.6"	""	"677"	"34"	"35.000"	"28.000"	"0.0137264639249278"	"22"	"0.0001991"	"0.004707"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILEFAER"	"[K].aILEFAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"589.34204"	"1177.67681"	"1177.67784"	"-0.88"	"-0.00052"	"6/62"	"6"	"62"	"508646.434692383"	"HCD"	"MS2"	"11.90703"	"30.2"	"100.000"	"93.0127"	"32770"	"32770"	"32753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.2"	""	"43.8"	""	"50.0"	""	"39.9"	""	"52.8"	"59.6"	""	"699"	"31"	"35.000"	"28.000"	"0.0292043254871821"	"20"	"0.0001686"	"0.00126"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILEFAER"	"[K].aILEFAER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"589.34253"	"1177.67778"	"1177.67784"	"-0.05"	"-0.00003"	"7/62"	"7"	"62"	"502702.690979004"	"HCD"	"MS2"	"8.486455"	"28.5"	"100.000"	"93.0677"	"32756"	"32756"	"32742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.0"	""	"37.6"	""	"39.3"	""	"43.4"	""	"53.0"	"53.2"	""	"694"	"47"	"35.000"	"28.000"	"0.000632891808704914"	"23"	"9.9E-05"	"0.0007139"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"589.34430"	"1177.68132"	"1177.68287"	"-1.32"	"-0.00078"	"10/52"	"10"	"52"	"5899520.35913086"	"HCD"	"MS2"	"6.195611"	"460.1"	"100.000"	"35.1445"	"9294"	"9294"	"9275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"706.7"	""	"677.2"	""	"612.6"	""	"731.0"	""	"827.5"	"805.2"	""	"647"	"28"	"35.000"	"28.000"	"0.0467599765836308"	"23"	"0.003818"	"0.04201"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"589.34460"	"1177.68193"	"1177.68287"	"-0.80"	"-0.00047"	"10/52"	"10"	"52"	"3309545.00506592"	"HCD"	"MS2"	"0"	"266.2"	"100.000"	"34.9884"	"9269"	"9269"	"9252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.2"	""	"395.7"	""	"353.1"	""	"428.6"	""	"483.4"	"487.3"	""	"657"	"28"	"35.000"	"28.000"	"0.0526666110841679"	"22"	"0.002189"	"0.02066"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"589.34479"	"1177.68230"	"1177.68287"	"-0.49"	"-0.00029"	"10/52"	"10"	"52"	"28830037.2766113"	"HCD"	"MS2"	"0.3855338"	"844.0"	"39.497"	"35.2956"	"9392"	"9392"	"9378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1144.1"	""	"1084.2"	""	"1206.1"	""	"1309.0"	""	"1592.3"	"1675.5"	""	"657"	"27"	"35.000"	"28.000"	"0.0653936191857291"	"21"	"0.005392"	"0.06818"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"589.34491"	"1177.68254"	"1177.68287"	"-0.28"	"-0.00017"	"5/52"	"5"	"52"	"3918336.00274658"	"HCD"	"MS2"	"50.4216"	"270.7"	"100.000"	"35.7067"	"9521"	"9521"	"9504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"383.0"	""	"350.2"	""	"360.7"	""	"463.8"	""	"474.4"	"541.8"	""	"653"	"12"	"35.000"	"28.000"	"1.96735704853278"	"20"	"0.004819"	"0.05768"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"589.34491"	"1177.68254"	"1177.68287"	"-0.28"	"-0.00017"	"6/52"	"6"	"52"	"28063974.6676025"	"HCD"	"MS2"	"0.2255715"	"921.5"	"43.824"	"35.4244"	"9407"	"9407"	"9393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1222.2"	""	"1219.7"	""	"1311.4"	""	"1414.9"	""	"1772.4"	"1808.0"	""	"653"	"29"	"35.000"	"28.000"	"0.0410093783146376"	"21"	"0.004959"	"0.06313"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDEK"	"[K].gIGTDEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"589.34546"	"1177.68364"	"1177.68287"	"0.65"	"0.00038"	"6/52"	"6"	"52"	"4908057.1887207"	"HCD"	"MS2"	"52.83981"	"332.8"	"100.000"	"35.5597"	"9498"	"9498"	"9490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"478.9"	""	"450.2"	""	"425.6"	""	"583.1"	""	"559.4"	"664.7"	""	"636"	"23"	"35.000"	"28.000"	"0.172356283147716"	"21"	"0.002875"	"0.03103"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQAVQLPR"	"[K].hQAVQLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z118"	"Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q9Z118"	"Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"393.23730"	"1177.69736"	"1177.70031"	"-2.50"	"-0.00098"	"6/70"	"6"	"70"	"2682721.41674805"	"HCD"	"MS2"	"42.46478"	"66.9"	"100.000"	"27.0725"	"6081"	"6081"	"6070"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.0"	""	"90.5"	""	"86.3"	""	"122.0"	"2.2"	"119.9"	"122.0"	""	"527"	"35"	"34.000"	"27.000"	"0.00905275192716169"	"21"	"0.0001686"	"0.001268"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMGEVGK"	"[R].vMGEVGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"589.35400"	"1177.70073"	"1177.70150"	"-0.65"	"-0.00038"	"5/48"	"5"	"48"	"1906428.16491699"	"HCD"	"MS2"	"19.36158"	"150.0"	"100.000"	"51.8646"	"16074"	"16074"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"253.1"	""	"193.7"	""	"211.9"	""	"171.1"	""	"273.0"	"320.5"	""	"512"	"22"	"34.000"	"27.000"	"0.159676117883499"	"24"	"0.002834"	"0.03062"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMGEVGK"	"[R].vMGEVGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"589.35455"	"1177.70183"	"1177.70150"	"0.28"	"0.00016"	"6/48"	"6"	"48"	"2146738.0090332"	"HCD"	"MS2"	"25.0482"	"168.6"	"100.000"	"51.2012"	"15843"	"15843"	"15823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.3"	""	"240.0"	""	"239.3"	""	"204.0"	""	"308.7"	"344.0"	""	"454"	"26"	"33.000"	"26.000"	"0.0588878715200971"	"24"	"0.001615"	"0.01458"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMGEVGK"	"[R].vMGEVGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"589.35468"	"1177.70207"	"1177.70150"	"0.49"	"0.00029"	"5/48"	"5"	"48"	"2136020.66345215"	"HCD"	"MS2"	"6.539456"	"163.5"	"100.000"	"51.4936"	"15958"	"15958"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.4"	""	"229.4"	""	"233.3"	""	"192.1"	""	"305.0"	"342.7"	""	"517"	"21"	"34.000"	"27.000"	"0.195191340851515"	"24"	"0.002711"	"0.02855"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMGEVGK"	"[R].vMGEVGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"589.35510"	"1177.70293"	"1177.70150"	"1.21"	"0.00071"	"10/48"	"10"	"48"	"2220969.18792725"	"HCD"	"MS2"	"8.610251"	"177.2"	"100.000"	"51.5779"	"15959"	"15959"	"15942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"284.6"	""	"249.9"	""	"250.9"	""	"223.9"	""	"302.5"	"368.6"	""	"517"	"29"	"34.000"	"27.000"	"0.0337645174582081"	"25"	"0.002035"	"0.01807"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNTVNTMR"	"[K].nNTVNTMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.81061"	"1178.61394"	"1178.61492"	"-0.83"	"-0.00049"	"5/76"	"5"	"76"	"176321.674377441"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"23.6806"	"4697"	"4697"	"4671"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.5"	""	"17.4"	""	"28.2"	""	"31.4"	"0.8"	"41.2"	"32.8"	""	"600"	"3"	"34.000"	"27.000"	"15.2799261317159"	"13"	"0.009312"	"0.1211"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFEEGGR"	"[R].iAAFEEGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"589.82147"	"1178.63567"	"1178.63670"	"-0.88"	"-0.00052"	"7/66"	"7"	"66"	"1075095.93243408"	"HCD"	"MS2"	"8.847548"	"66.9"	"100.000"	"57.8612"	"18510"	"18510"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.6"	""	"83.2"	""	"84.5"	""	"111.1"	"0.2"	"125.0"	"125.9"	""	"690"	"46"	"35.000"	"28.000"	"0.000781302286119605"	"24"	"0"	"0.0001042"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDENAVVR"	"[R].fDENAVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"589.82147"	"1178.63567"	"1178.63670"	"-0.88"	"-0.00052"	"6/66"	"6"	"66"	"2493265.50360107"	"HCD"	"MS2"	"10.495"	"127.2"	"100.000"	"52.5652"	"16360"	"16360"	"16339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"305.3"	""	"76.8"	""	"169.4"	""	"240.4"	"0.7"	"239.3"	"170.2"	""	"690"	"33"	"35.000"	"28.000"	"0.0192229083381516"	"19"	"0.0001991"	"0.003159"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAFEEGGR"	"[R].iAAFEEGGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"589.82166"	"1178.63603"	"1178.63670"	"-0.57"	"-0.00033"	"8/66"	"8"	"66"	"1120828.55163574"	"HCD"	"MS2"	"14.21456"	"72.0"	"100.000"	"57.4537"	"18379"	"18379"	"18356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"100.1"	""	"109.8"	""	"115.2"	""	"136.1"	"126.3"	""	"688"	"41"	"35.000"	"28.000"	"0.00259154313924399"	"21"	"0"	"0.0001044"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDENAVVR"	"[R].fDENAVVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"589.82202"	"1178.63677"	"1178.63670"	"0.05"	"0.00003"	"7/66"	"7"	"66"	"2517934.57891846"	"HCD"	"MS2"	"10.41303"	"123.9"	"100.000"	"52.2545"	"16267"	"16267"	"16246"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.1"	""	"76.4"	""	"167.6"	""	"217.3"	"0.3"	"245.2"	"169.9"	""	"690"	"37"	"35.000"	"28.000"	"0.00706023399670012"	"21"	"0.0001991"	"0.002156"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"589.83374"	"1178.66020"	"1178.66186"	"-1.40"	"-0.00083"	"4/68"	"4"	"68"	"236140.750976563"	"HCD"	"MS2"	"22.58299"	"11.4"	"100.000"	"101.4914"	"36195"	"36195"	"36170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.5"	""	"17.0"	""	"17.2"	""	"18.0"	""	"20.4"	"19.2"	""	"741"	"17"	"35.000"	"28.000"	"0.819951589908889"	"17"	"0.002525"	"0.02423"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.83411"	"1178.66094"	"1178.66186"	"-0.78"	"-0.00046"	"7/68"	"7"	"68"	"5532754.99615479"	"HCD"	"MS2"	"2.42365"	"45.3"	"100.000"	"100.7786"	"35882"	"35882"	"35865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"71.3"	""	"76.8"	""	"59.4"	"0.1"	"55.8"	"67.6"	""	"744"	"52"	"35.000"	"28.000"	"0.000262145821655778"	"16"	"9.9E-05"	"0.0008468"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.83441"	"1178.66155"	"1178.66186"	"-0.26"	"-0.00015"	"5/68"	"5"	"68"	"821871.053710938"	"HCD"	"MS2"	"5.992412"	"18.3"	"100.000"	"101.1242"	"36048"	"36048"	"36037"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"26.4"	""	"22.5"	""	"28.8"	""	"33.4"	"34.3"	""	"737"	"38"	"35.000"	"28.000"	"0.00610151231538521"	"15"	"0.0001991"	"0.004305"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"589.83441"	"1178.66155"	"1178.66186"	"-0.26"	"-0.00015"	"7/68"	"7"	"68"	"1565610.39080811"	"HCD"	"MS2"	"2.417603"	"20.4"	"100.000"	"100.4740"	"35757"	"35757"	"35740"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"31.3"	""	"30.5"	""	"37.0"	""	"28.3"	"31.3"	""	"737"	"53"	"35.000"	"28.000"	"0.000169214467730386"	"16"	"9.9E-05"	"0.0006971"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.83447"	"1178.66167"	"1178.66186"	"-0.16"	"-0.00009"	"5/68"	"5"	"68"	"6261213.19287109"	"HCD"	"MS2"	"0.650007"	"47.7"	"100.000"	"100.8493"	"35938"	"35938"	"35921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.9"	""	"77.8"	""	"79.7"	""	"64.4"	""	"61.2"	"67.9"	""	"737"	"42"	"35.000"	"28.000"	"0.00260878021545555"	"15"	"0"	"0.0001871"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.83466"	"1178.66203"	"1178.66186"	"0.15"	"0.00009"	"6/68"	"6"	"68"	"553026.310546875"	"HCD"	"MS2"	"15.30068"	"14.7"	"100.000"	"101.0716"	"35999"	"35999"	"35986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"18.7"	""	"22.2"	""	"21.2"	""	"27.9"	"28.9"	""	"734"	"34"	"35.000"	"28.000"	"0.0133864698521698"	"15"	"0.0001991"	"0.004359"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVPFSSSV"	"[K].qVVPFSSSV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.83514"	"1178.66301"	"1178.66186"	"0.98"	"0.00058"	"5/68"	"5"	"68"	"982230.208435059"	"HCD"	"MS2"	"14.85783"	"16.3"	"100.000"	"100.5306"	"35808"	"35808"	"35785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"23.9"	""	"26.4"	""	"24.4"	""	"26.5"	"27.6"	""	"730"	"41"	"35.000"	"28.000"	"0.00291268060852812"	"16"	"9.9E-05"	"0.0006181"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSHAVVAR"	"[R].iPSHAVVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"393.57770"	"1178.71854"	"1178.72071"	"-1.84"	"-0.00072"	"8/64"	"8"	"64"	"7348647.75946045"	"HCD"	"MS2"	"27.8027"	"185.0"	"100.000"	"32.1326"	"8074"	"8074"	"8063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.8"	""	"242.3"	""	"271.1"	""	"304.8"	""	"350.7"	"340.6"	""	"353"	"39"	"32.000"	"25.000"	"0.00224256329569308"	"19"	"9.9E-05"	"0.000582"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSHAVVAR"	"[R].iPSHAVVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"393.57782"	"1178.71891"	"1178.72071"	"-1.53"	"-0.00060"	"8/64"	"8"	"64"	"18761361.4754639"	"HCD"	"MS2"	"12.90627"	"140.2"	"45.376"	"32.4283"	"8194"	"8194"	"8180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.1"	""	"204.5"	""	"203.5"	""	"203.0"	""	"260.8"	"269.6"	""	"349"	"53"	"32.000"	"25.000"	"9.26393355183075E-05"	"25"	"0"	"0.0001994"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSHAVVAR"	"[R].iPSHAVVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"393.57813"	"1178.71982"	"1178.72071"	"-0.75"	"-0.00030"	"8/64"	"8"	"64"	"7222466.690979"	"HCD"	"MS2"	"22.79338"	"183.2"	"100.000"	"32.0199"	"8066"	"8066"	"8052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.2"	""	"243.3"	""	"269.6"	""	"279.1"	""	"358.4"	"358.6"	""	"335"	"41"	"32.000"	"25.000"	"0.00148256864646665"	"19"	"0"	"0.0001233"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSHAVVAR"	"[R].iPSHAVVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"393.57828"	"1178.72028"	"1178.72071"	"-0.36"	"-0.00014"	"8/64"	"8"	"64"	"17281843.6221313"	"HCD"	"MS2"	"13.73796"	"186.6"	"69.926"	"32.3137"	"8184"	"8184"	"8174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.2"	""	"259.3"	""	"276.3"	""	"285.8"	""	"333.5"	"358.0"	""	"329"	"51"	"32.000"	"25.000"	"0.000130066634305971"	"18"	"0"	"0.0003019"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDDVFGR"	"[K].eLDDVFGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RRT9"	"Cytochrome P450 4V2 OS=Rattus norvegicus OX=10116 GN=Cyp4v2 PE=2 SV=1"	"A2RRT9"	"Cytochrome P450 4V2 OS=Rattus norvegicus OX=10116 GN=Cyp4v2 PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"590.31293"	"1179.61858"	"1179.62072"	"-1.81"	"-0.00107"	"7/62"	"7"	"62"	"354838.510803223"	"HCD"	"MS2"	"20.93724"	"23.6"	"100.000"	"84.2998"	"29233"	"29233"	"29209"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"30.5"	""	"29.1"	""	"41.4"	""	"54.1"	"44.0"	""	"656"	"18"	"35.000"	"28.000"	"0.519844967127246"	"19"	"0.004672"	"0.05527"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELGEYIR"	"[R].aELGEYIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"590.33160"	"1179.65593"	"1179.65710"	"-0.99"	"-0.00059"	"11/62"	"11"	"62"	"1958031.84912109"	"HCD"	"MS2"	"13.02955"	"103.0"	"100.000"	"69.1613"	"23097"	"23097"	"23076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.0"	""	"132.6"	""	"134.2"	""	"181.7"	"0.8"	"188.1"	"209.1"	""	"635"	"39"	"35.000"	"28.000"	"0.0043928232532354"	""	"0.0001991"	"0.00216"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELGEYIR"	"[R].aELGEYIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"590.33167"	"1179.65605"	"1179.65710"	"-0.89"	"-0.00053"	"6/62"	"6"	"62"	"1889481.87268066"	"HCD"	"MS2"	"10.01618"	"100.2"	"100.000"	"69.2203"	"23155"	"23155"	"23136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.4"	""	"114.0"	""	"140.3"	""	"170.9"	"1.3"	"192.4"	"188.7"	""	"649"	"33"	"35.000"	"28.000"	"0.0161888016180774"	""	"0.0001991"	"0.002449"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELGEYIR"	"[R].aELGEYIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"590.33179"	"1179.65630"	"1179.65710"	"-0.68"	"-0.00040"	"10/62"	"10"	"62"	"7303742.64880371"	"HCD"	"MS2"	"0.3512792"	"322.9"	"100.000"	"69.5103"	"23273"	"23273"	"23259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"411.6"	""	"401.1"	""	"430.6"	""	"548.2"	""	"634.2"	"640.8"	""	"649"	"33"	"35.000"	"28.000"	"0.0152480638242392"	""	"0.0001991"	"0.00571"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"590.33191"	"1179.65654"	"1179.65710"	"-0.48"	"-0.00028"	"7/62"	"7"	"62"	"1407094.02752686"	"HCD"	"MS2"	"3.907228"	"75.0"	"100.000"	"93.1843"	"32803"	"32803"	"32783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.0"	""	"101.8"	""	"107.0"	""	"137.1"	""	"139.4"	"111.9"	""	"645"	"42"	"35.000"	"28.000"	"0.00220561506248261"	"23"	"9.9E-05"	"0.0005171"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGEYLER"	"[K].aLGEYLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"590.33191"	"1179.65654"	"1179.65710"	"-0.48"	"-0.00028"	"7/62"	"7"	"62"	"3153566.24694824"	"HCD"	"MS2"	"0.6828884"	"153.4"	"100.000"	"69.8007"	"23391"	"23391"	"23372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.6"	""	"180.7"	""	"216.3"	""	"246.2"	"0.0"	"310.1"	"313.6"	""	"645"	"35"	"35.000"	"28.000"	"0.00934393307033677"	"21"	"0.0001686"	"0.001928"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGEYLER"	"[K].aLGEYLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"590.33203"	"1179.65679"	"1179.65710"	"-0.27"	"-0.00016"	"7/62"	"7"	"62"	"3370200.72845459"	"HCD"	"MS2"	"3.433253"	"166.9"	"100.000"	"69.7300"	"23329"	"23329"	"23314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"210.9"	""	"219.9"	""	"206.0"	""	"262.5"	""	"341.8"	"346.7"	""	"645"	"37"	"35.000"	"28.000"	"0.00603294990267971"	"22"	"0.0001991"	"0.00565"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"590.33203"	"1179.65679"	"1179.65710"	"-0.27"	"-0.00016"	"7/62"	"7"	"62"	"8154393.79724121"	"HCD"	"MS2"	"0.5973126"	"369.6"	"100.000"	"93.3738"	"32916"	"32916"	"32902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"540.0"	""	"521.7"	""	"557.0"	""	"640.2"	"4.2"	"676.8"	"557.9"	""	"645"	"40"	"35.000"	"28.000"	"0.00313710979668072"	""	"0.0001991"	"0.003297"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELGEYIR"	"[R].aELGEYIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.2162"	"0.0000"	"1"	"1"	"1"	"590.33203"	"1179.65679"	"1179.65710"	"-0.27"	"-0.00016"	"7/62"	"7"	"62"	"6998380.43383789"	"HCD"	"MS2"	"0.7221402"	"320.1"	"100.000"	"69.4444"	"23213"	"23213"	"23200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"417.0"	""	"393.3"	""	"438.3"	""	"533.7"	""	"629.8"	"625.7"	""	"645"	"37"	"35.000"	"28.000"	"0.00603294990267971"	""	"0.0001991"	"0.003763"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.33209"	"1179.65691"	"1179.65710"	"-0.17"	"-0.00010"	"6/64"	"6"	"64"	"8236758.64447021"	"HCD"	"MS2"	"0.2027746"	"346.8"	"100.000"	"72.5739"	"24511"	"24511"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"492.6"	""	"485.2"	""	"469.3"	""	"523.3"	""	"648.6"	"670.6"	""	"645"	"39"	"35.000"	"28.000"	"0.00447228754811185"	"28"	"0.0001991"	"0.003438"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.33209"	"1179.65691"	"1179.65710"	"-0.17"	"-0.00010"	"11/64"	"11"	"64"	"11039122.3074341"	"HCD"	"MS2"	"0.1796183"	"417.3"	"86.762"	"72.4544"	"24433"	"24433"	"24416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"601.4"	""	"573.3"	""	"577.4"	""	"638.0"	"1.2"	"771.9"	"791.0"	""	"645"	"42"	"35.000"	"28.000"	"0.0018177314400387"	""	"0.0001991"	"0.003207"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"590.33215"	"1179.65703"	"1179.65710"	"-0.06"	"-0.00004"	"7/62"	"7"	"62"	"1232301.0557251"	"HCD"	"MS2"	"3.728188"	"70.0"	"100.000"	"93.0941"	"32803"	"32803"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.4"	""	"98.1"	""	"102.0"	""	"130.8"	"1.0"	"120.7"	"101.0"	""	"651"	"35"	"35.000"	"28.000"	"0.0109031250445873"	"26"	"0.0001686"	"0.001665"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.33221"	"1179.65715"	"1179.65710"	"0.04"	"0.00002"	"11/64"	"11"	"64"	"7236783.20471191"	"HCD"	"MS2"	"1.737883"	"330.8"	"100.000"	"71.9638"	"24268"	"24268"	"24250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"488.7"	""	"453.1"	""	"450.0"	""	"551.9"	"1.7"	"586.5"	"600.4"	""	"651"	"42"	"35.000"	"28.000"	"0.00190349172389029"	""	"0.0001686"	"0.001253"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"590.33228"	"1179.65727"	"1179.65710"	"0.14"	"0.00009"	"6/64"	"6"	"64"	"4994563.68249512"	"HCD"	"MS2"	"1.232568"	"240.8"	"100.000"	"71.8516"	"24192"	"24192"	"24175"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"347.4"	"3.4"	"327.4"	""	"333.5"	""	"392.9"	"0.2"	"437.7"	"438.1"	""	"660"	"40"	"35.000"	"28.000"	"0.00298891758296406"	""	"0.0001686"	"0.001586"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSLEELR"	"[R].gFSLEELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"590.33234"	"1179.65740"	"1179.65710"	"0.25"	"0.00015"	"7/62"	"7"	"62"	"8404119.0512085"	"HCD"	"MS2"	"0"	"370.7"	"100.000"	"93.4829"	"32924"	"32924"	"32908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"523.0"	""	"518.4"	""	"558.6"	""	"678.2"	""	"657.2"	"575.9"	""	"660"	"40"	"35.000"	"28.000"	"0.00320268289191011"	""	"0.0001991"	"0.003509"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"590.33234"	"1179.65740"	"1179.65710"	"0.25"	"0.00015"	"11/64"	"11"	"64"	"31420083.1208496"	"HCD"	"MS2"	"0.1502933"	"618.5"	"48.088"	"72.1386"	"24305"	"24305"	"24288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"881.1"	""	"840.7"	""	"857.7"	""	"980.2"	""	"1130.6"	"1171.3"	""	"660"	"43"	"35.000"	"28.000"	"0.00185145832090715"	""	"0.0001991"	"0.004557"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLDPSTR"	"[R].vYLDPSTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"590.33270"	"1179.65813"	"1179.65710"	"0.87"	"0.00051"	"6/62"	"6"	"62"	"4808077.09161377"	"HCD"	"MS2"	"2.839649"	"203.8"	"100.000"	"52.6781"	"16440"	"16440"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"326.2"	""	"272.3"	""	"310.8"	""	"268.5"	""	"371.7"	"381.3"	""	"656"	"30"	"35.000"	"28.000"	"0.0301213091646615"	""	"0.0001991"	"0.004554"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"590.33276"	"1179.65825"	"1179.65710"	"0.97"	"0.00057"	"5/64"	"5"	"64"	"453153.528930664"	"HCD"	"MS2"	"41.81467"	"30.0"	"100.000"	"73.6733"	"24959"	"24959"	"24928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.5"	""	"36.3"	""	"46.5"	""	"45.6"	""	"56.1"	"61.3"	""	"657"	"11"	"35.000"	"28.000"	"2.77035467925564"	"20"	"0.004213"	"0.04744"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFDEAIR"	"[K].tVFDEAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"590.33325"	"1179.65923"	"1179.65710"	"1.80"	"0.00106"	"11/64"	"11"	"64"	"36256065.8068848"	"HCD"	"MS2"	"0.1749267"	"513.8"	"33.417"	"72.2673"	"24387"	"24387"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"743.1"	""	"704.5"	""	"724.1"	""	"803.4"	""	"921.7"	"973.5"	""	"651"	"42"	"35.000"	"28.000"	"0.00183464056971348"	""	"0.0003294"	"0.006185"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLDPSTR"	"[R].vYLDPSTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.1923"	"0.0000"	"1"	"1"	"1"	"590.33344"	"1179.65959"	"1179.65710"	"2.11"	"0.00124"	"6/62"	"6"	"62"	"5450805.5043335"	"HCD"	"MS2"	"18.51959"	"228.4"	"100.000"	"52.9285"	"16508"	"16508"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"381.9"	""	"282.3"	""	"327.6"	""	"322.1"	""	"429.8"	"422.7"	""	"640"	"26"	"35.000"	"28.000"	"0.0790951726405161"	""	"0.0009352"	"0.007923"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"590.34393"	"1179.68059"	"1179.68077"	"-0.15"	"-0.00009"	"10/52"	"10"	"52"	"8030329.9720459"	"HCD"	"MS2"	"0.6976903"	"619.4"	"100.000"	"38.8083"	"10816"	"10816"	"10800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"750.7"	""	"708.8"	""	"776.7"	""	"921.2"	"29.7"	"1298.3"	"1401.6"	""	"545"	"25"	"34.000"	"27.000"	"0.0847942701861389"	"22"	"0.004213"	"0.04557"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"590.34399"	"1179.68071"	"1179.68077"	"-0.05"	"-0.00003"	"6/52"	"6"	"52"	"13026983.8143311"	"HCD"	"MS2"	"4.422688"	"1003.6"	"100.000"	"38.6178"	"10703"	"10703"	"10686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1697.2"	""	"1618.4"	""	"1536.9"	""	"1020.9"	""	"1666.2"	"1956.5"	""	"465"	"37"	"33.000"	"26.000"	"0.0050631752207211"	""	"0.001872"	"0.01565"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"590.34412"	"1179.68096"	"1179.68077"	"0.16"	"0.00010"	"6/52"	"6"	"52"	"11611760.3735352"	"HCD"	"MS2"	"4.296525"	"849.8"	"100.000"	"38.5096"	"10694"	"10694"	"10676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1471.5"	""	"1359.7"	""	"1273.8"	""	"885.1"	""	"1420.0"	"1630.3"	""	"465"	"37"	"33.000"	"26.000"	"0.00493654337415052"	""	"0.002525"	"0.02368"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSTLK"	"[K].eGSSTLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"Q8VHU4"	"Elongator complex protein 1 OS=Rattus norvegicus OX=10116 GN=Elp1 PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"590.35059"	"1179.69390"	"1179.69852"	"-3.92"	"-0.00231"	"5/56"	"5"	"56"	"755527.383483887"	"HCD"	"MS2"	"46.13696"	"69.1"	"100.000"	"31.0700"	"7649"	"7649"	"7622"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.4"	""	"95.2"	""	"86.3"	""	"107.3"	""	"130.0"	"132.2"	""	"394"	"19"	"32.000"	"25.000"	"0.246868811463459"	"18"	"0.004275"	"0.05012"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGEVTK"	"[K].sTGEVTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AXM7"	"HBS1-like protein OS=Rattus norvegicus OX=10116 GN=Hbs1l PE=1 SV=1"	"Q6AXM7"	"HBS1-like protein OS=Rattus norvegicus OX=10116 GN=Hbs1l PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"590.35187"	"1179.69646"	"1179.69852"	"-1.75"	"-0.00103"	"3/58"	"3"	"58"	"754694.553710938"	"HCD"	"MS2"	"0"	"67.2"	"100.000"	"28.3157"	"6584"	"6584"	"6559"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.6"	""	"71.8"	""	"96.9"	""	"110.5"	""	"141.0"	"122.1"	""	"373"	"13"	"32.000"	"25.000"	"0.945537670932325"	"18"	"0.009781"	"0.1301"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLESAK"	"[R].sSLESAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"Q3ZU82"	"Golgin subfamily A member 5 OS=Rattus norvegicus OX=10116 GN=Golga5 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"590.35278"	"1179.69829"	"1179.69852"	"-0.20"	"-0.00012"	"10/56"	"10"	"56"	"1057802.63024902"	"HCD"	"MS2"	"34.31681"	"98.1"	"100.000"	"35.0000"	"9236"	"9236"	"9216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.5"	""	"114.6"	""	"128.8"	""	"161.1"	""	"199.3"	"195.5"	""	"351"	"15"	"32.000"	"25.000"	"0.614153768134767"	"19"	"0.003401"	"0.03802"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGNANAWR"	"[K].yGNANAWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"590.80615"	"1180.60503"	"1180.60607"	"-0.88"	"-0.00052"	"6/68"	"6"	"68"	"2556037.37304688"	"HCD"	"MS2"	"10.80112"	"188.7"	"100.000"	"41.6093"	"11910"	"11910"	"11890"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"267.0"	""	"258.7"	""	"232.2"	""	"343.6"	"4.7"	"345.5"	"336.0"	""	"561"	"27"	"34.000"	"27.000"	"0.0518719847623351"	"21"	"0.0001991"	"0.003283"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"590.82379"	"1180.64031"	"1180.64112"	"-0.69"	"-0.00041"	"6/74"	"6"	"74"	"684982.79675293"	"HCD"	"MS2"	"55.45518"	"31.5"	"100.000"	"85.7135"	"29803"	"29803"	"29786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"44.9"	""	"44.7"	""	"58.2"	""	"54.7"	"54.3"	""	"688"	"40"	"35.000"	"28.000"	"0.00356909775041396"	"27"	"0.0001991"	"0.004362"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"590.82379"	"1180.64031"	"1180.64112"	"-0.69"	"-0.00041"	"6/74"	"6"	"74"	"4196531.88446045"	"HCD"	"MS2"	"2.992279"	"138.2"	"100.000"	"86.2945"	"30035"	"30035"	"30019"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.7"	""	"197.4"	""	"209.1"	""	"235.6"	""	"270.0"	"251.9"	""	"688"	"63"	"35.000"	"28.000"	"1.86448306298159E-05"	"27"	"0"	"0.0002541"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"590.82404"	"1180.64079"	"1180.64112"	"-0.28"	"-0.00016"	"6/74"	"6"	"74"	"6078703.94146729"	"HCD"	"MS2"	"0.8715186"	"209.6"	"100.000"	"86.0126"	"29953"	"29953"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.5"	""	"321.6"	""	"320.6"	""	"342.7"	""	"371.4"	"404.2"	""	"685"	"53"	"35.000"	"28.000"	"0.000182247078798877"	"25"	"9.9E-05"	"0.0004238"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"590.82410"	"1180.64092"	"1180.64112"	"-0.17"	"-0.00010"	"7/74"	"7"	"74"	"4662449.80950928"	"HCD"	"MS2"	"1.273834"	"161.3"	"100.000"	"85.9856"	"29912"	"29912"	"29900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.9"	""	"245.2"	""	"247.3"	""	"271.7"	""	"279.8"	"306.3"	""	"685"	"66"	"35.000"	"28.000"	"9.32525198016683E-06"	"26"	"0"	"9.888E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"590.82416"	"1180.64104"	"1180.64112"	"-0.07"	"-0.00004"	"7/74"	"7"	"74"	"3919756.10302734"	"HCD"	"MS2"	"5.33352"	"128.5"	"100.000"	"86.3123"	"30074"	"30074"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.9"	""	"189.7"	""	"197.6"	""	"216.3"	"2.0"	"233.8"	"253.0"	""	"685"	"39"	"35.000"	"28.000"	"0.00400553541424305"	"22"	"0"	"0.0002508"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAAVSFAK"	"[M].tDAAVSFAk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"Q09073"	"ADP/ATP translocase 2 OS=Rattus norvegicus OX=10116 GN=Slc25a5 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"590.82483"	"1180.64238"	"1180.64112"	"1.07"	"0.00063"	"6/74"	"6"	"74"	"708601.008972168"	"HCD"	"MS2"	"48.39042"	"33.1"	"100.000"	"85.7038"	"29828"	"29828"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"43.5"	""	"48.6"	""	"53.6"	""	"61.9"	"66.8"	""	"676"	"35"	"35.000"	"28.000"	"0.0110386687274249"	"24"	"9.9E-05"	"0.0006398"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNLGYR"	"[R].tLDNLGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"590.82941"	"1180.65154"	"1180.65235"	"-0.69"	"-0.00041"	"7/68"	"7"	"68"	"1402167.89044189"	"HCD"	"MS2"	"0"	"93.3"	"100.000"	"55.8270"	"17722"	"17722"	"17705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.1"	""	"154.0"	""	"134.9"	""	"135.6"	""	"160.2"	"159.5"	""	"624"	"31"	"34.000"	"27.000"	"0.0241076342549859"	"19"	"0.0001991"	"0.002898"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNLGYR"	"[R].tLDNLGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"590.82953"	"1180.65178"	"1180.65235"	"-0.48"	"-0.00029"	"6/68"	"6"	"68"	"4820971.68939209"	"HCD"	"MS2"	"0"	"234.8"	"100.000"	"56.1066"	"17833"	"17833"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"351.8"	""	"348.3"	""	"325.0"	""	"345.2"	"0.2"	"413.8"	"439.1"	""	"620"	"38"	"34.000"	"27.000"	"0.00536243071356682"	"17"	"0.0001991"	"0.003493"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNLGYR"	"[R].tLDNLGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"590.82959"	"1180.65190"	"1180.65235"	"-0.38"	"-0.00022"	"6/68"	"6"	"68"	"4757338.13824463"	"HCD"	"MS2"	"0"	"236.6"	"100.000"	"56.4588"	"17942"	"17942"	"17931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.6"	""	"351.2"	""	"332.6"	""	"380.4"	""	"416.8"	"431.6"	""	"619"	"38"	"34.000"	"27.000"	"0.00541577550129331"	"18"	"0.0001991"	"0.003228"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNLGYR"	"[R].tLDNLGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"590.82971"	"1180.65215"	"1180.65235"	"-0.17"	"-0.00010"	"7/68"	"7"	"68"	"1316985.93841553"	"HCD"	"MS2"	"0"	"80.0"	"100.000"	"56.3907"	"17948"	"17948"	"17932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.4"	""	"106.2"	""	"111.2"	""	"109.2"	"0.2"	"162.0"	"152.8"	""	"619"	"33"	"34.000"	"27.000"	"0.0158365528099725"	"19"	"0.0001991"	"0.002842"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDNLGYR"	"[R].tLDNLGYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"590.83105"	"1180.65483"	"1180.65235"	"2.10"	"0.00124"	"6/68"	"6"	"68"	"1906889.99523926"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"56.1746"	"17828"	"17828"	"17816"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.8"	""	"169.0"	""	"173.1"	""	"186.5"	""	"209.2"	"206.6"	""	"667"	"36"	"35.000"	"28.000"	"0.00865158817266625"	"24"	"0.0001991"	"0.003958"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTQSDK"	"[R].sGTQSDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"590.83197"	"1180.65666"	"1180.65739"	"-0.61"	"-0.00036"	"6/64"	"6"	"64"	"993468.295654297"	"HCD"	"MS2"	"0"	"87.3"	"100.000"	"20.2026"	"3395"	"3395"	"3372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.3"	""	"82.6"	""	"99.7"	""	"170.4"	""	"185.8"	"180.3"	""	"659"	"23"	"35.000"	"28.000"	"0.174926424374111"	"24"	"0.001488"	"0.0123"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTQSDK"	"[R].sGTQSDk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"590.83258"	"1180.65788"	"1180.65739"	"0.42"	"0.00025"	"6/64"	"6"	"64"	"882331.525024414"	"HCD"	"MS2"	"0"	"82.8"	"100.000"	"20.2379"	"3369"	"3369"	"3350"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.6"	""	"76.0"	""	"84.3"	""	"161.9"	""	"181.9"	"177.5"	""	"677"	"18"	"35.000"	"28.000"	"0.585542837594312"	"22"	"0.00192"	"0.01589"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSSNLK"	"[K].sSSSNLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"590.85010"	"1180.69292"	"1180.69377"	"-0.72"	"-0.00043"	"10/58"	"10"	"58"	"3745704.79052734"	"HCD"	"MS2"	"16.91031"	"294.5"	"100.000"	"26.2222"	"5723"	"5723"	"5702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"499.2"	""	"384.5"	""	"401.7"	""	"448.9"	""	"539.9"	"532.5"	""	"416"	"28"	"33.000"	"26.000"	"0.0368182663330023"	"24"	"0.00394"	"0.0435"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSSSNLK"	"[K].sSSSNLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"590.85052"	"1180.69377"	"1180.69377"	"0.00"	"0.00000"	"10/58"	"10"	"58"	"3623061.05621338"	"HCD"	"MS2"	"5.192976"	"272.0"	"100.000"	"26.0502"	"5693"	"5693"	"5671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"453.8"	""	"342.4"	""	"385.9"	""	"429.0"	""	"485.9"	"481.4"	""	"415"	"28"	"33.000"	"26.000"	"0.0366452847792379"	"24"	"0.00307"	"0.0337"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLDGIQR"	"[R].hLLDGIQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"394.23737"	"1180.69754"	"1180.69997"	"-2.06"	"-0.00081"	"5/58"	"5"	"58"	"726579.029846191"	"HCD"	"MS2"	"19.18452"	"31.7"	"100.000"	"44.1070"	"12965"	"12965"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.5"	""	"29.8"	""	"48.5"	""	"57.2"	"2.6"	"60.2"	"55.1"	""	"381"	"9"	"32.000"	"25.000"	"2.15226121745168"	"17"	"0.006237"	"0.07615"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLDGIQR"	"[R].hLLDGIQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"394.23761"	"1180.69828"	"1180.69997"	"-1.44"	"-0.00057"	"7/58"	"7"	"58"	"740396.092102051"	"HCD"	"MS2"	"53.57585"	"34.0"	"100.000"	"44.2992"	"13008"	"13008"	"12977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"40.3"	""	"50.9"	""	"59.8"	"1.9"	"62.7"	"63.2"	""	"369"	"14"	"32.000"	"25.000"	"0.704687179699886"	"21"	"0.007752"	"0.09875"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVPIPVDR"	"[R].rVPIPVDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"1"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"394.25003"	"1180.73554"	"1180.73636"	"-0.69"	"-0.00027"	"7/70"	"7"	"70"	"2807875.16333008"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"39.2395"	"10957"	"10957"	"10932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.4"	""	"84.3"	""	"93.3"	""	"115.4"	"2.0"	"118.6"	"133.0"	""	"184"	"33"	"29.000"	"22.000"	"0.00486169631633165"	""	"0.0001686"	"0.001211"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVPIPVDR"	"[R].rVPIPVDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"1"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"394.25040"	"1180.73664"	"1180.73636"	"0.24"	"0.00009"	"7/70"	"7"	"70"	"1971980.90557861"	"HCD"	"MS2"	"63.92545"	"62.4"	"100.000"	"39.1248"	"10945"	"10945"	"10931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.7"	""	"84.2"	""	"82.7"	""	"99.3"	""	"120.1"	"131.0"	""	"178"	"31"	"29.000"	"22.000"	"0.00661287032728065"	"21"	"0.0001991"	"0.003057"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELDTVCR"	"[R].aELDTVcR.[H]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"P29826"	"Rano class II histocompatibility antigen, B-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Bb PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"591.29590"	"1181.58452"	"1181.58560"	"-0.91"	"-0.00054"	"7/62"	"7"	"62"	"832456.98236084"	"HCD"	"MS2"	"29.43534"	"53.3"	"100.000"	"74.7448"	"25394"	"25394"	"25379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.0"	""	"78.4"	""	"85.4"	""	"77.1"	""	"92.6"	"99.4"	""	"453"	"14"	"33.000"	"26.000"	"0.924843410043548"	"15"	"0.0001991"	"0.005819"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGNANAWR"	"[K].yGnANAWR.[Y]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"3"	"591.29706"	"1181.58684"	"1181.59009"	"-2.75"	"-0.00162"	"6/68"	"6"	"68"	"949751.149291992"	"HCD"	"MS2"	"47.2334"	"77.7"	"100.000"	"54.8309"	"17319"	"17319"	"17290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"95.8"	""	"88.2"	""	"142.3"	""	"172.8"	"159.5"	""	"463"	"4"	"33.000"	"26.000"	"10.2932138419099"	"15"	"0.007717"	"0.09853"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTSYTLR"	"[R].dPTSYTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00770"	"Mast cell protease 2 OS=Rattus norvegicus OX=10116 GN=Mcpt2 PE=1 SV=1"	"P00770"	"Mast cell protease 2 OS=Rattus norvegicus OX=10116 GN=Mcpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"591.32111"	"1181.63494"	"1181.63637"	"-1.21"	"-0.00072"	"7/66"	"7"	"66"	"3878354.40228271"	"HCD"	"MS2"	"21.09886"	"183.6"	"100.000"	"46.8340"	"14069"	"14069"	"14049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.8"	""	"398.1"	""	"256.6"	""	"223.5"	"1.9"	"220.9"	"212.5"	""	"518"	"23"	"34.000"	"27.000"	"0.131613295623185"	"21"	"0.0001991"	"0.003611"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTSYTLR"	"[R].dPTSYTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00770"	"Mast cell protease 2 OS=Rattus norvegicus OX=10116 GN=Mcpt2 PE=1 SV=1"	"P00770"	"Mast cell protease 2 OS=Rattus norvegicus OX=10116 GN=Mcpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"591.32196"	"1181.63664"	"1181.63637"	"0.23"	"0.00014"	"6/66"	"6"	"66"	"2758932.61450195"	"HCD"	"MS2"	"0"	"148.6"	"100.000"	"47.1196"	"14147"	"14147"	"14132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"333.2"	""	"323.8"	""	"206.8"	""	"177.1"	"1.7"	"187.2"	"169.3"	""	"541"	"23"	"34.000"	"27.000"	"0.127106356377711"	"19"	"0.0001991"	"0.004743"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"591.33124"	"1181.65520"	"1181.65666"	"-1.24"	"-0.00073"	"10/54"	"10"	"54"	"4388678.01837158"	"HCD"	"MS2"	"0"	"382.0"	"100.000"	"44.7351"	"13184"	"13184"	"13169"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"624.9"	""	"426.5"	""	"442.7"	""	"646.5"	""	"641.0"	"845.2"	""	"508"	"26"	"34.000"	"27.000"	"0.0677382100788456"	"26"	"0.002373"	"0.02243"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"591.33160"	"1181.65593"	"1181.65666"	"-0.62"	"-0.00036"	"10/54"	"10"	"54"	"11167094.1964111"	"HCD"	"MS2"	"0"	"661.1"	"73.990"	"45.0306"	"13304"	"13304"	"13287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1001.0"	""	"705.4"	""	"775.9"	""	"1057.8"	""	"1082.0"	"1656.0"	""	"510"	"26"	"34.000"	"27.000"	"0.0652439401160939"	"27"	"0.00329"	"0.03523"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"591.33160"	"1181.65593"	"1181.65666"	"-0.62"	"-0.00036"	"10/54"	"10"	"54"	"6948648.89483643"	"HCD"	"MS2"	"0"	"571.1"	"100.000"	"44.8637"	"13270"	"13270"	"13255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"866.3"	""	"596.3"	""	"662.3"	""	"938.5"	"5.0"	"965.7"	"1382.2"	""	"510"	"26"	"34.000"	"27.000"	"0.0676924418303762"	"27"	"0.002834"	"0.03017"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGADFAK"	"[K].dGADFAk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3;Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P09117; P05065"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3; Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"591.33179"	"1181.65630"	"1181.65666"	"-0.31"	"-0.00018"	"6/54"	"6"	"54"	"6065587.70513916"	"HCD"	"MS2"	"0"	"537.4"	"100.000"	"44.5519"	"13144"	"13144"	"13125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"885.3"	""	"619.2"	""	"600.1"	""	"905.4"	""	"862.2"	"1231.6"	""	"506"	"24"	"34.000"	"27.000"	"0.0908072494651863"	"24"	"0.003317"	"0.03597"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGESFK"	"[K].gVGESFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.34973"	"1181.69219"	"1181.69304"	"-0.73"	"-0.00043"	"6/50"	"6"	"50"	"3521166.62884521"	"HCD"	"MS2"	"52.30563"	"254.2"	"100.000"	"48.0576"	"14567"	"14567"	"14545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"339.1"	""	"313.2"	""	"338.3"	""	"443.0"	""	"473.7"	"506.8"	""	"311"	"23"	"31.000"	"24.000"	"0.0742558020537709"	"14"	"0.002328"	"0.022"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVGESFK"	"[K].gVGESFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.35004"	"1181.69280"	"1181.69304"	"-0.21"	"-0.00012"	"6/50"	"6"	"50"	"3279875.22399902"	"HCD"	"MS2"	"15.89629"	"268.8"	"100.000"	"48.3662"	"14655"	"14655"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"349.7"	""	"329.7"	""	"370.2"	""	"448.4"	""	"517.8"	"538.8"	""	"311"	"23"	"31.000"	"24.000"	"0.0781142726707312"	"14"	"0.002525"	"0.02381"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWTQAER"	"[R].yWTQAER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"591.80896"	"1182.61064"	"1182.61049"	"0.13"	"0.00008"	"5/60"	"5"	"60"	"8133646.87072754"	"HCD"	"MS2"	"23.10398"	"442.8"	"100.000"	"43.7662"	"12790"	"12790"	"12777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"395.8"	""	"388.9"	""	"331.8"	""	"834.8"	"1.1"	"1120.8"	"1152.1"	""	"441"	"32"	"33.000"	"26.000"	"0.0151847831343913"	""	"0.003208"	"0.03456"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWTQAER"	"[R].yWTQAER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"591.80914"	"1182.61101"	"1182.61049"	"0.44"	"0.00026"	"6/60"	"6"	"60"	"2039402.04541016"	"HCD"	"MS2"	"11.73896"	"160.4"	"100.000"	"44.0740"	"12915"	"12915"	"12897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.8"	""	"174.1"	""	"158.6"	""	"269.2"	""	"366.5"	"373.1"	""	"426"	"30"	"33.000"	"26.000"	"0.0199700707475213"	"22"	"0.001615"	"0.01396"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YWTQAER"	"[R].yWTQAER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"591.80951"	"1182.61174"	"1182.61049"	"1.06"	"0.00063"	"5/60"	"5"	"60"	"9256216.33343506"	"HCD"	"MS2"	"10.30338"	"483.4"	"100.000"	"43.6192"	"12765"	"12765"	"12746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"434.3"	""	"448.6"	""	"364.0"	""	"893.4"	""	"1182.9"	"1294.6"	""	"427"	"32"	"33.000"	"26.000"	"0.0141383223540326"	""	"0.002834"	"0.03065"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSFLDQR"	"[K].tSSFLDQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"591.82043"	"1182.63359"	"1182.63162"	"1.67"	"0.00099"	"6/68"	"6"	"68"	"2502776.21154785"	"HCD"	"MS2"	"22.54555"	"162.6"	"100.000"	"46.7216"	"14023"	"14023"	"14003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.0"	""	"256.3"	""	"210.2"	""	"246.2"	"1.0"	"260.7"	"270.2"	""	"503"	"16"	"34.000"	"27.000"	"0.692688518889549"	"18"	"0.007717"	"0.0985"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYEPFR"	"[K].iEYEPFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"591.82117"	"1182.63506"	"1182.63564"	"-0.49"	"-0.00029"	"5/52"	"5"	"52"	"780155.240722656"	"HCD"	"MS2"	"36.40633"	"44.5"	"100.000"	"78.9742"	"27077"	"27077"	"27056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.5"	""	"50.2"	""	"54.6"	""	"76.4"	"1.3"	"100.7"	"88.6"	""	"478"	"8"	"33.000"	"26.000"	"3.71875785953613"	"13"	"0.006423"	"0.08022"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IENHEGVR"	"[K].iENHEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"591.82336"	"1182.63945"	"1182.64285"	"-2.87"	"-0.00170"	"7/72"	"7"	"72"	"763621.135009766"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"21.1937"	"3753"	"3753"	"3734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.0"	""	"57.3"	""	"67.4"	""	"70.1"	""	"88.2"	"89.8"	""	"498"	"27"	"33.000"	"26.000"	"0.0546008428902262"	"19"	"0.0001991"	"0.004895"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].IGHPAPSFk.[A]"	"K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"394.89890"	"1182.68213"	"1182.68326"	"-0.95"	"-0.00038"	"6/64"	"6"	"64"	"13216528.1843262"	"HCD"	"MS2"	"32.28746"	"350.6"	"54.399"	"31.0051"	"7661"	"7661"	"7649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"522.7"	""	"793.0"	""	"384.1"	""	"357.4"	""	"352.9"	"911.3"	""	"373"	"24"	"32.000"	"25.000"	"0.077925363379595"	"14"	"0.00455"	"0.05324"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGHPAPSFK"	"[K].IGHPAPSFk.[A]"	"K9(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"394.89902"	"1182.68250"	"1182.68326"	"-0.64"	"-0.00025"	"5/64"	"5"	"64"	"11522054.6459351"	"HCD"	"MS2"	"35.52499"	"521.5"	"100.000"	"31.1183"	"7669"	"7669"	"7652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"808.7"	""	"1167.1"	""	"569.3"	""	"547.6"	""	"535.1"	"1309.5"	""	"373"	"37"	"32.000"	"25.000"	"0.0038786343214484"	"20"	"0.0009352"	"0.008434"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDTLTDSR"	"[R].fDTLTDSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"592.31079"	"1183.61431"	"1183.61563"	"-1.12"	"-0.00066"	"8/66"	"8"	"66"	"2432391.4644165"	"HCD"	"MS2"	"14.48353"	"120.7"	"100.000"	"58.3077"	"18692"	"18692"	"18670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.9"	""	"147.8"	""	"168.1"	""	"211.2"	""	"217.6"	"227.5"	""	"464"	"26"	"33.000"	"26.000"	"0.0618711210168984"	"20"	"0.000885"	"0.007801"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDTLTDSR"	"[R].fDTLTDSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"3"	"592.31079"	"1183.61431"	"1183.61563"	"-1.12"	"-0.00066"	"4/66"	"4"	"66"	"2747808.32196045"	"HCD"	"MS2"	"7.290338"	"131.9"	"100.000"	"58.0658"	"18629"	"18629"	"18606"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.7"	""	"165.1"	""	"197.8"	""	"218.0"	"1.5"	"230.3"	"234.4"	""	"464"	"26"	"33.000"	"26.000"	"0.0636045207887269"	"22"	"0.001718"	"0.01503"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDTLTDSR"	"[R].fDTLTDSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"592.31134"	"1183.61540"	"1183.61563"	"-0.19"	"-0.00011"	"8/66"	"8"	"66"	"2187811.28308105"	"HCD"	"MS2"	"5.142079"	"120.8"	"100.000"	"58.3652"	"18751"	"18751"	"18731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.6"	""	"149.7"	""	"165.5"	""	"195.6"	""	"210.3"	"221.5"	""	"481"	"28"	"33.000"	"26.000"	"0.0411258683279214"	"21"	"0.001261"	"0.009623"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDTLTDSR"	"[R].fDTLTDSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"592.31134"	"1183.61540"	"1183.61563"	"-0.19"	"-0.00011"	"8/66"	"8"	"66"	"2430218.11651611"	"HCD"	"MS2"	"6.264787"	"131.9"	"100.000"	"58.6045"	"18814"	"18814"	"18797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.1"	""	"161.5"	""	"179.8"	""	"216.1"	""	"254.5"	"237.9"	""	"481"	"28"	"33.000"	"26.000"	"0.0392748993468587"	"22"	"0.001488"	"0.01286"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"592.31854"	"1183.62981"	"1183.63089"	"-0.91"	"-0.00054"	"6/66"	"6"	"66"	"2356481.94000244"	"HCD"	"MS2"	"14.4472"	"119.2"	"100.000"	"70.1580"	"23536"	"23536"	"23520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.7"	""	"187.3"	""	"183.2"	""	"187.0"	""	"201.0"	"185.3"	""	"492"	"29"	"33.000"	"26.000"	"0.0331844869117547"	"22"	"0.002084"	"0.01872"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTETYVR"	"[R].wTETYVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.31854"	"1183.62981"	"1183.63089"	"-0.91"	"-0.00054"	"6/52"	"6"	"52"	"1469700.99768066"	"HCD"	"MS2"	"50.14555"	"83.7"	"100.000"	"59.7185"	"19267"	"19267"	"19244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.2"	""	"109.3"	""	"113.8"	""	"136.2"	""	"150.3"	"169.4"	""	"492"	"13"	"33.000"	"26.000"	"1.34256433828453"	"13"	"0.004234"	"0.04922"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTETYVR"	"[R].wTETYVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.31860"	"1183.62993"	"1183.63089"	"-0.81"	"-0.00048"	"9/52"	"9"	"52"	"2289706.09844971"	"HCD"	"MS2"	"7.057679"	"125.6"	"100.000"	"59.7898"	"19329"	"19329"	"19314"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.8"	""	"157.0"	""	"168.4"	""	"205.9"	""	"229.0"	"247.8"	""	"492"	"28"	"33.000"	"26.000"	"0.0356397875972012"	"14"	"0.002588"	"0.02671"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTETYVR"	"[R].wTETYVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"592.31885"	"1183.63042"	"1183.63089"	"-0.40"	"-0.00024"	"6/52"	"6"	"52"	"795341.34564209"	"HCD"	"MS2"	"18.04209"	"53.2"	"100.000"	"60.3082"	"19507"	"19507"	"19480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.7"	""	"67.0"	""	"67.8"	""	"99.3"	"0.4"	"102.0"	"99.1"	""	"477"	"13"	"33.000"	"26.000"	"1.11042283305226"	"16"	"0.00455"	"0.05311"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTETYVR"	"[R].wTETYVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.31891"	"1183.63054"	"1183.63089"	"-0.29"	"-0.00017"	"5/52"	"5"	"52"	"952222.463317871"	"HCD"	"MS2"	"16.63212"	"65.1"	"100.000"	"60.0963"	"19454"	"19454"	"19429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.6"	""	"81.0"	""	"98.2"	""	"95.6"	""	"114.5"	"135.9"	""	"488"	"23"	"33.000"	"26.000"	"0.111786620358346"	"14"	"0.004314"	"0.05057"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTETYVR"	"[R].wTETYVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"592.31891"	"1183.63054"	"1183.63089"	"-0.29"	"-0.00017"	"6/52"	"6"	"52"	"2240430.83306885"	"HCD"	"MS2"	"5.565749"	"121.1"	"100.000"	"59.9949"	"19379"	"19379"	"19369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.1"	""	"156.4"	""	"155.4"	""	"202.4"	""	"228.9"	"240.6"	""	"488"	"32"	"33.000"	"26.000"	"0.01450072867022"	"19"	"0.002525"	"0.02361"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"592.31897"	"1183.63066"	"1183.63089"	"-0.19"	"-0.00011"	"6/66"	"6"	"66"	"1902405.0135498"	"HCD"	"MS2"	"10.30911"	"96.1"	"100.000"	"70.3547"	"23583"	"23583"	"23566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.5"	""	"146.0"	""	"153.2"	""	"158.4"	""	"154.0"	"147.2"	""	"488"	"27"	"33.000"	"26.000"	"0.0473576154132637"	"19"	"0.001615"	"0.01448"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"592.31909"	"1183.63091"	"1183.63089"	"0.01"	"0.00001"	"6/66"	"6"	"66"	"1625379.31726074"	"HCD"	"MS2"	"6.95617"	"88.2"	"100.000"	"70.4645"	"23660"	"23660"	"23645"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.1"	""	"130.6"	""	"121.2"	""	"150.9"	""	"159.9"	"134.1"	""	"489"	"36"	"33.000"	"26.000"	"0.00635739013193908"	"21"	"0.001261"	"0.009891"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTETYVR"	"[R].wTETYVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.31940"	"1183.63152"	"1183.63089"	"0.53"	"0.00031"	"6/52"	"6"	"52"	"1282634.71252441"	"HCD"	"MS2"	"68.45508"	"85.6"	"100.000"	"59.4974"	"19211"	"19211"	"19197"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.8"	""	"89.7"	""	"140.6"	""	"141.7"	""	"137.5"	"151.8"	""	"486"	"13"	"33.000"	"26.000"	"1.17383288895665"	"13"	"0.00307"	"0.03422"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFVEFR"	"[R].eQFVEFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"O35783"	"Calumenin OS=Rattus norvegicus OX=10116 GN=Calu PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"592.31964"	"1183.63201"	"1183.63089"	"0.94"	"0.00056"	"6/66"	"6"	"66"	"1972153.6628418"	"HCD"	"MS2"	"12.48128"	"101.9"	"100.000"	"70.0737"	"23468"	"23468"	"23448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.7"	""	"161.6"	""	"162.6"	""	"154.4"	""	"183.1"	"150.4"	""	"483"	"27"	"33.000"	"26.000"	"0.0462292805892592"	"24"	"0.002189"	"0.0212"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nImEYLR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.32056"	"1183.63384"	"1183.63426"	"-0.36"	"-0.00021"	"6/60"	"6"	"60"	"1192553.10644531"	"HCD"	"MS2"	"11.22185"	"52.4"	"100.000"	"67.8678"	"22604"	"22604"	"22579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"53.5"	""	"53.3"	""	"151.0"	"0.1"	"102.4"	"89.2"	""	"490"	"16"	"33.000"	"26.000"	"0.552288606977346"	"14"	"0.006237"	"0.0762"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nImEYLR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.32062"	"1183.63396"	"1183.63426"	"-0.25"	"-0.00015"	"6/60"	"6"	"60"	"1842029.5489502"	"HCD"	"MS2"	"0"	"72.8"	"100.000"	"68.1177"	"22673"	"22673"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.8"	""	"72.9"	""	"68.6"	""	"242.0"	""	"130.2"	"115.7"	""	"490"	"15"	"33.000"	"26.000"	"0.716417332571617"	"14"	"0.006267"	"0.0775"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nImEYLR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.32068"	"1183.63408"	"1183.63426"	"-0.15"	"-0.00009"	"6/60"	"6"	"60"	"1192037.53594971"	"HCD"	"MS2"	"12.92939"	"58.1"	"100.000"	"67.2988"	"22373"	"22373"	"22352"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.4"	""	"64.4"	""	"58.1"	""	"167.0"	"1.7"	"94.5"	"102.6"	""	"490"	"12"	"33.000"	"26.000"	"1.56014902622439"	"13"	"0.00807"	"0.1023"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMEYLR"	"[R].nImEYLR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.32111"	"1183.63494"	"1183.63426"	"0.57"	"0.00034"	"6/60"	"6"	"60"	"1658066.69012451"	"HCD"	"MS2"	"10.23706"	"69.8"	"100.000"	"67.2285"	"22313"	"22313"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.0"	""	"78.8"	""	"67.0"	""	"203.6"	"0.0"	"132.8"	"121.1"	""	"483"	"16"	"33.000"	"26.000"	"0.651504072935448"	"14"	"0.008522"	"0.1082"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSYVLSER"	"[K].tSYVLSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"592.32959"	"1183.65190"	"1183.65202"	"-0.10"	"-0.00006"	"7/68"	"7"	"68"	"2492514.72479248"	"HCD"	"MS2"	"15.70382"	"118.7"	"100.000"	"44.2809"	"13000"	"13000"	"12977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.7"	""	"140.1"	""	"148.9"	""	"182.6"	"1.3"	"255.7"	"237.2"	""	"457"	"30"	"33.000"	"26.000"	"0.0234901724121899"	"21"	"0.0001991"	"0.002772"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSYVLSER"	"[K].tSYVLSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"592.32965"	"1183.65203"	"1183.65202"	"0.01"	"0.00000"	"7/68"	"7"	"68"	"2669645.68792725"	"HCD"	"MS2"	"16.48677"	"179.7"	"100.000"	"44.0956"	"12960"	"12960"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.4"	""	"216.3"	""	"250.8"	""	"291.4"	""	"346.1"	"352.3"	""	"461"	"40"	"33.000"	"26.000"	"0.00248697219473975"	"23"	"0.0001686"	"0.001658"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLQPLNR"	"[R].dVLQPLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZFJ3"	"SH3 domain-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3bp1 PE=1 SV=1"	"D3ZFJ3"	"SH3 domain-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Sh3bp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"592.35345"	"1183.69963"	"1183.69964"	"0.00"	"0.00000"	"5/64"	"5"	"64"	"1283504.44555664"	"HCD"	"MS2"	"59.6792"	"84.3"	"100.000"	"59.6379"	"19234"	"19234"	"19221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.7"	""	"91.7"	""	"138.6"	""	"134.3"	""	"111.6"	"153.3"	""	"303"	"10"	"31.000"	"24.000"	"1.43685397190086"	"15"	"0.002035"	"0.01779"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVIYIER"	"[K].yVIYIER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"592.84705"	"1184.68682"	"1184.68768"	"-0.73"	"-0.00043"	"9/48"	"9"	"48"	"742832.745727539"	"HCD"	"MS2"	"27.16254"	"38.8"	"100.000"	"83.4408"	"28914"	"28914"	"28894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"63.8"	""	"66.7"	""	"50.4"	"0.3"	"61.7"	"59.9"	""	"390"	"25"	"32.000"	"25.000"	"0.0586184879012505"	"15"	"0.0001991"	"0.003852"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVIYIER"	"[K].yVIYIER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.84808"	"1184.68889"	"1184.68768"	"1.03"	"0.00061"	"9/48"	"9"	"48"	"646185.848266602"	"HCD"	"MS2"	"34.37236"	"32.8"	"100.000"	"83.3562"	"28851"	"28851"	"28832"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"55.3"	""	"53.3"	""	"55.2"	"2.4"	"47.6"	"55.0"	""	"377"	"26"	"32.000"	"25.000"	"0.0430835374436269"	"14"	"0.001049"	"0.008667"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFSDGFR"	"[K].nNFSDGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"593.29596"	"1185.58464"	"1185.58500"	"-0.30"	"-0.00018"	"6/72"	"6"	"72"	"3776830.50860596"	"HCD"	"MS2"	"0"	"213.8"	"100.000"	"45.9586"	"13718"	"13718"	"13701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.7"	""	"280.2"	""	"282.8"	""	"350.0"	"3.3"	"371.0"	"413.4"	""	"333"	"32"	"32.000"	"25.000"	"0.00987220665425698"	"16"	"0.0001991"	"0.004919"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFSDGFR"	"[K].nNFSDGFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.29602"	"1185.58476"	"1185.58500"	"-0.20"	"-0.00012"	"6/72"	"6"	"72"	"3227738.44799805"	"HCD"	"MS2"	"0"	"189.7"	"100.000"	"46.2679"	"13809"	"13809"	"13793"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"270.0"	""	"248.3"	""	"252.2"	""	"317.3"	"3.7"	"341.5"	"364.1"	""	"333"	"32"	"32.000"	"25.000"	"0.0104091253347152"	"15"	"0.0001991"	"0.00315"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPEFYNR"	"[R].mPEFYNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"593.29919"	"1185.59111"	"1185.59240"	"-1.08"	"-0.00064"	"3/50"	"3"	"50"	"1232142.15307617"	"HCD"	"MS2"	"13.6918"	"60.5"	"100.000"	"66.1508"	"21912"	"21912"	"21894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"89.6"	""	"85.9"	""	"66.4"	"0.2"	"109.2"	"121.0"	""	"360"	"9"	"32.000"	"25.000"	"2.40033857789398"	"16"	"0.006577"	"0.08119"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFDIDSGR"	"[K].fFDIDSGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"593.30798"	"1185.60869"	"1185.61015"	"-1.23"	"-0.00073"	"6/62"	"6"	"62"	"1425972.92401123"	"HCD"	"MS2"	"13.66604"	"68.8"	"100.000"	"93.7131"	"33052"	"33052"	"33033"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.9"	""	"80.7"	""	"82.3"	""	"130.0"	""	"148.4"	"156.5"	""	"409"	"29"	"33.000"	"26.000"	"0.0266497606193495"	"25"	"0.0001686"	"0.00197"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFDIDSGR"	"[K].fFDIDSGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"593.30841"	"1185.60954"	"1185.61015"	"-0.51"	"-0.00030"	"6/62"	"6"	"62"	"986383.038513184"	"HCD"	"MS2"	"16.20815"	"50.2"	"100.000"	"93.8821"	"33085"	"33085"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"51.5"	""	"66.0"	""	"92.4"	"1.8"	"105.3"	"112.2"	""	"403"	"25"	"33.000"	"26.000"	"0.0619833508170253"	"18"	"0.0001686"	"0.00171"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFDIDSGR"	"[K].fFDIDSGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"593.30853"	"1185.60979"	"1185.61015"	"-0.31"	"-0.00018"	"7/62"	"7"	"62"	"694773.951965332"	"HCD"	"MS2"	"44.95834"	"34.4"	"100.000"	"93.4109"	"32930"	"32930"	"32915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.4"	""	"47.9"	""	"41.4"	""	"56.0"	""	"75.5"	"74.4"	""	"411"	"28"	"33.000"	"26.000"	"0.0336365795153415"	""	"9.9E-05"	"0.0006857"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFDIDSGR"	"[K].fFDIDSGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"593.30896"	"1185.61064"	"1185.61015"	"0.41"	"0.00024"	"10/62"	"10"	"62"	"904453.364013672"	"HCD"	"MS2"	"44.21268"	"45.7"	"100.000"	"93.5243"	"32940"	"32940"	"32923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.8"	""	"56.2"	""	"52.1"	""	"92.3"	"1.5"	"91.0"	"95.0"	""	"410"	"28"	"33.000"	"26.000"	"0.0309566431603651"	"23"	"0.0001686"	"0.001052"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYSALMR"	"[K].eSYSALMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"593.31018"	"1185.61308"	"1185.61352"	"-0.37"	"-0.00022"	"6/62"	"6"	"62"	"1578296.98602295"	"HCD"	"MS2"	"52.30914"	"77.2"	"100.000"	"53.4511"	"16756"	"16756"	"16728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.5"	""	"116.9"	""	"112.6"	""	"103.4"	""	"138.2"	"148.4"	""	"438"	"10"	"33.000"	"26.000"	"2.12541682826762"	"16"	"0.002035"	"0.01764"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYSALMR"	"[K].eSYSALMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"593.31079"	"1185.61431"	"1185.61352"	"0.66"	"0.00039"	"6/62"	"6"	"62"	"1589564.41912842"	"HCD"	"MS2"	"55.25699"	"82.3"	"100.000"	"53.7641"	"16850"	"16850"	"16825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.2"	""	"117.8"	""	"114.5"	""	"110.9"	"2.4"	"141.2"	"160.7"	""	"434"	"4"	"33.000"	"26.000"	"9.5380530550008"	"13"	"0.002035"	"0.01802"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVYQNYR"	"[R].nVYQNYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"O54924"	"Exocyst complex component 8 OS=Rattus norvegicus OX=10116 GN=Exoc8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.31409"	"1185.62090"	"1185.62139"	"-0.41"	"-0.00025"	"5/62"	"5"	"62"	"1177699.02282715"	"HCD"	"MS2"	"27.55514"	"75.0"	"100.000"	"33.1935"	"8504"	"8504"	"8482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.6"	""	"83.4"	""	"97.3"	""	"145.9"	""	"135.7"	"155.5"	""	"424"	"14"	"33.000"	"26.000"	"0.764426723205882"	"13"	"0.00511"	"0.06453"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNVLHEK"	"[R].ESnVLHEk.[S]"	"N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"D4AD37"	"Inositol monophosphatase 3 OS=Rattus norvegicus OX=10116 GN=Impad1 PE=3 SV=1"	"D4AD37"	"Inositol monophosphatase 3 OS=Rattus norvegicus OX=10116 GN=Impad1 PE=3 SV=1"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"395.88190"	"1185.63114"	"1185.63128"	"-0.12"	"-0.00005"	"4/78"	"4"	"78"	"255081.289733887"	"HCD"	"MS2"	"42.37007"	"16.9"	"100.000"	"53.4258"	"16712"	"16712"	"16682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.8"	""	"21.0"	""	"19.2"	""	"36.2"	""	"35.1"	"30.7"	""	"488"	"19"	"33.000"	"26.000"	"0.30157117376046"	"20"	"0.005266"	"0.06734"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"593.34204"	"1185.67681"	"1185.67890"	"-1.77"	"-0.00105"	"6/88"	"6"	"88"	"857359.232299805"	"HCD"	"MS2"	"23.7048"	"48.1"	"100.000"	"54.1438"	"17038"	"17038"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.3"	""	"57.7"	""	"65.5"	""	"87.5"	"1.8"	"80.5"	"97.3"	""	"481"	"12"	"33.000"	"26.000"	"1.63725030765845"	"17"	"0.004234"	"0.04975"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"593.34247"	"1185.67766"	"1185.67890"	"-1.05"	"-0.00062"	"6/88"	"6"	"88"	"3406124.91918945"	"HCD"	"MS2"	"7.262438"	"143.1"	"100.000"	"53.8448"	"16916"	"16916"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.1"	""	"190.5"	""	"198.9"	""	"239.5"	""	"258.9"	"273.3"	""	"471"	"32"	"33.000"	"26.000"	"0.0137718064816025"	"17"	"0.0001991"	"0.005366"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.34271"	"1185.67815"	"1185.67890"	"-0.64"	"-0.00038"	"6/88"	"6"	"88"	"3533095.39331055"	"HCD"	"MS2"	"5.602491"	"149.5"	"100.000"	"54.1256"	"16997"	"16997"	"16977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.9"	""	"196.2"	""	"204.4"	""	"243.3"	"0.0"	"273.5"	"280.7"	""	"475"	"24"	"33.000"	"26.000"	"0.0928247127506956"	"14"	"0.001316"	"0.01036"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"593.34277"	"1185.67827"	"1185.67890"	"-0.53"	"-0.00032"	"6/88"	"6"	"88"	"1821050.93859863"	"HCD"	"MS2"	"59.00099"	"88.2"	"100.000"	"53.8354"	"16879"	"16879"	"16857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.9"	""	"119.1"	""	"118.6"	""	"141.4"	""	"159.5"	"172.6"	""	"475"	"17"	"33.000"	"26.000"	"0.451506091481784"	"16"	"0.002525"	"0.02482"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.34290"	"1185.67851"	"1185.67890"	"-0.33"	"-0.00019"	"8/88"	"8"	"88"	"1039743.43023682"	"HCD"	"MS2"	"33.41837"	"55.4"	"100.000"	"54.4268"	"17120"	"17120"	"17098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"70.7"	""	"77.1"	""	"101.7"	"0.5"	"100.8"	"109.4"	""	"473"	"13"	"33.000"	"26.000"	"1.08600330035919"	"13"	"0.001453"	"0.01197"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNLIPGTR"	"[R].aDNLIPGTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"Q6AYK3"	"Inositol-3-phosphate synthase 1 OS=Rattus norvegicus OX=10116 GN=Isyna1 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.34296"	"1185.67864"	"1185.67890"	"-0.22"	"-0.00013"	"7/88"	"7"	"88"	"1930945.19976807"	"HCD"	"MS2"	"44.97842"	"90.4"	"100.000"	"53.5454"	"16794"	"16794"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.3"	""	"136.7"	""	"128.9"	""	"144.6"	""	"151.3"	"163.3"	""	"473"	"17"	"33.000"	"26.000"	"0.477343645010689"	"14"	"0.002525"	"0.02506"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKALVAAVR"	"[K].EkALVAAVR.[Q]"	"K2(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"395.92178"	"1185.75080"	"1185.75167"	"-0.74"	"-0.00029"	"8/78"	"8"	"78"	"1815831.86322021"	"HCD"	"MS2"	"40.84947"	"71.6"	"100.000"	"34.5226"	"9044"	"9044"	"9023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.3"	""	"98.1"	""	"88.5"	""	"117.9"	""	"143.3"	"130.5"	""	"288"	"29"	"31.000"	"24.000"	"0.0183807188468834"	"22"	"0.002035"	"0.01859"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKALVAAVR"	"[K].eKALVAAVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.7241"	"0.0000"	"1"	"2"	"2"	"395.92178"	"1185.75080"	"1185.75167"	"-0.74"	"-0.00029"	"8/78"	"8"	"78"	"1815831.86322021"	"HCD"	"MS2"	"40.84947"	"71.6"	"100.000"	"34.5226"	"9044"	"9044"	"9023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.3"	""	"98.1"	""	"88.5"	""	"117.9"	""	"143.3"	"130.5"	""	"288"	"29"	"31.000"	"24.000"	"0.0190266571322867"	"22"	"0.0009964"	"0.008455"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKALVAAVR"	"[K].EkALVAAVR.[Q]"	"K2(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"395.92178"	"1185.75080"	"1185.75167"	"-0.74"	"-0.00029"	"9/78"	"9"	"78"	"3772852.84753418"	"HCD"	"MS2"	"12.25426"	"123.1"	"100.000"	"34.5318"	"9084"	"9084"	"9060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.5"	""	"220.4"	""	"173.1"	""	"163.6"	""	"198.1"	"181.5"	""	"288"	"25"	"31.000"	"24.000"	"0.0474637985535539"	"24"	"0.007412"	"0.09421"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKALVAAVR"	"[K].eKALVAAVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.6000"	"0.0000"	"1"	"2"	"2"	"395.92178"	"1185.75080"	"1185.75167"	"-0.74"	"-0.00029"	"9/78"	"9"	"78"	"3772852.84753418"	"HCD"	"MS2"	"12.25426"	"123.1"	"100.000"	"34.5318"	"9084"	"9084"	"9060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.5"	""	"220.4"	""	"173.1"	""	"163.6"	""	"198.1"	"181.5"	""	"288"	"25"	"31.000"	"24.000"	"0.0475732139093014"	"24"	"0.003568"	"0.03952"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEEYDR"	"[R].fVEEYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"593.80109"	"1186.59490"	"1186.59417"	"0.61"	"0.00036"	"5/54"	"5"	"54"	"2763536.77124023"	"HCD"	"MS2"	"17.55197"	"158.8"	"100.000"	"51.4147"	"15926"	"15926"	"15911"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.0"	""	"171.7"	""	"169.1"	""	"275.3"	"5.0"	"355.8"	"365.2"	""	"388"	"26"	"32.000"	"25.000"	"0.0524567922637115"	"18"	"0.001488"	"0.01265"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEEYDR"	"[R].fVEEYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"593.80121"	"1186.59514"	"1186.59417"	"0.82"	"0.00049"	"10/54"	"10"	"54"	"3009643.12310791"	"HCD"	"MS2"	"10.94903"	"177.8"	"100.000"	"51.7394"	"16024"	"16024"	"16006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.4"	""	"189.3"	""	"182.2"	""	"297.7"	"6.6"	"395.3"	"449.3"	""	"389"	"32"	"32.000"	"25.000"	"0.012385672881659"	"23"	"0.0009352"	"0.008277"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGAQTVR"	"[K].yYGAQTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82330"	"1186.63933"	"1186.64179"	"-2.07"	"-0.00123"	"6/62"	"6"	"62"	"2138013.4755249"	"HCD"	"MS2"	"0"	"128.4"	"100.000"	"35.3440"	"9374"	"9374"	"9358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.2"	""	"193.5"	""	"177.9"	""	"182.5"	""	"207.2"	"229.8"	""	"575"	"27"	"34.000"	"27.000"	"0.0616081047822017"	"14"	"0.000264"	"0.006099"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGAQTVR"	"[K].yYGAQTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82385"	"1186.64043"	"1186.64179"	"-1.15"	"-0.00068"	"6/62"	"6"	"62"	"1941828.55596924"	"HCD"	"MS2"	"0"	"118.4"	"100.000"	"35.2131"	"9359"	"9359"	"9337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.4"	""	"175.7"	""	"170.6"	""	"156.0"	"0.5"	"213.0"	"211.7"	""	"557"	"32"	"34.000"	"27.000"	"0.0191789664531881"	"14"	"0.0001991"	"0.003814"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSNAYAR"	"[R].yLSNAYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82385"	"1186.64043"	"1186.64179"	"-1.15"	"-0.00068"	"6/64"	"6"	"64"	"6567030.17657471"	"HCD"	"MS2"	"3.580868"	"346.6"	"100.000"	"44.6988"	"13203"	"13203"	"13188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"576.5"	""	"491.4"	""	"561.7"	""	"475.6"	"0.2"	"590.7"	"581.5"	""	"557"	"36"	"34.000"	"27.000"	"0.00636539266740058"	"15"	"0.0001991"	"0.003037"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSNAYAR"	"[R].yLSNAYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82397"	"1186.64067"	"1186.64179"	"-0.94"	"-0.00056"	"6/64"	"6"	"64"	"6323723.90301514"	"HCD"	"MS2"	"2.614141"	"340.1"	"100.000"	"44.9411"	"13268"	"13268"	"13252"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"553.6"	""	"478.6"	""	"542.5"	""	"475.9"	"7.2"	"561.5"	"596.5"	""	"563"	"36"	"34.000"	"27.000"	"0.00649349333624699"	"15"	"0.0001991"	"0.002973"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGAQTVR"	"[K].yYGAQTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82422"	"1186.64116"	"1186.64179"	"-0.53"	"-0.00031"	"6/62"	"6"	"62"	"3549745.46844482"	"HCD"	"MS2"	"9.799216"	"177.5"	"100.000"	"35.6400"	"9494"	"9494"	"9478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"313.3"	""	"259.8"	""	"269.9"	""	"206.8"	"0.0"	"296.9"	"332.4"	""	"560"	"31"	"34.000"	"27.000"	"0.0209005652354818"	"14"	"0.0005161"	"0.006817"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGAQTVR"	"[K].yYGAQTVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"593.82471"	"1186.64214"	"1186.64179"	"0.29"	"0.00017"	"6/62"	"6"	"62"	"3922792.7578125"	"HCD"	"MS2"	"5.755172"	"144.3"	"100.000"	"35.5094"	"9478"	"9478"	"9464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"251.1"	""	"199.7"	""	"208.3"	""	"181.6"	"0.4"	"246.7"	"277.7"	""	"552"	"30"	"34.000"	"27.000"	"0.0274100029364178"	"14"	"0.0005161"	"0.006821"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSNAYAR"	"[R].yLSNAYAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"593.82501"	"1186.64275"	"1186.64179"	"0.81"	"0.00048"	"6/64"	"6"	"64"	"1929908.96923828"	"HCD"	"MS2"	"11.58793"	"160.0"	"100.000"	"45.2673"	"13401"	"13401"	"13378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.2"	""	"198.6"	""	"239.1"	""	"221.5"	""	"307.3"	"319.7"	""	"552"	"14"	"34.000"	"27.000"	"1.09624867653565"	"17"	"0.001872"	"0.0157"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQDAINR"	"[K].qIQDAINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"P19511"	"ATP synthase F(0) complex subunit B1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pb PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"593.84076"	"1186.67424"	"1186.67415"	"0.08"	"0.00005"	"6/70"	"6"	"70"	"2499188.09716797"	"HCD"	"MS2"	"0"	"127.7"	"100.000"	"39.5297"	"11072"	"11072"	"11054"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.0"	""	"130.5"	""	"150.2"	""	"223.4"	""	"263.6"	"283.6"	""	"527"	"36"	"34.000"	"27.000"	"0.00677299288759596"	"27"	"0.0001686"	"0.001254"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGISVDPR"	"[R].tIGISVDPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"396.23749"	"1186.69791"	"1186.69930"	"-1.17"	"-0.00046"	"7/76"	"7"	"76"	"728676.28515625"	"HCD"	"MS2"	"58.3703"	"24.0"	"100.000"	"65.2594"	"21549"	"21549"	"21520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"35.7"	""	"36.4"	""	"35.7"	""	"44.8"	"48.6"	""	"513"	"22"	"34.000"	"27.000"	"0.177454644040707"	"23"	"0.001615"	"0.01389"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGISVDPR"	"[R].tIGISVDPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"396.23755"	"1186.69809"	"1186.69930"	"-1.02"	"-0.00040"	"5/76"	"5"	"76"	"395073.156738281"	"HCD"	"MS2"	"14.73116"	"15.9"	"100.000"	"65.5323"	"21627"	"21627"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"21.0"	""	"24.5"	""	"31.0"	""	"24.5"	"29.8"	""	"563"	"21"	"34.000"	"27.000"	"0.244612360844094"	"18"	"0.001049"	"0.008746"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGISVDPR"	"[R].tIGISVDPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"593.85358"	"1186.69988"	"1186.69930"	"0.48"	"0.00029"	"7/76"	"7"	"76"	"2344011.25488281"	"HCD"	"MS2"	"7.485139"	"75.9"	"100.000"	"65.6131"	"21660"	"21660"	"21643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.6"	""	"102.2"	""	"118.6"	""	"108.1"	"0.1"	"140.5"	"133.6"	""	"566"	"51"	"34.000"	"27.000"	"0.000215668359837191"	"26"	"0.0001686"	"0.001065"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGISVDPR"	"[R].tIGISVDPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"593.85376"	"1186.70024"	"1186.69930"	"0.79"	"0.00047"	"7/76"	"7"	"76"	"7233177.48980713"	"HCD"	"MS2"	"2.298251"	"189.4"	"100.000"	"65.2688"	"21553"	"21553"	"21536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"278.5"	""	"259.6"	""	"291.5"	""	"328.9"	"2.2"	"328.9"	"302.0"	""	"565"	"54"	"34.000"	"27.000"	"0.000110158611236124"	"27"	"9.9E-05"	"0.0005523"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGISVDPR"	"[R].tIGISVDPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"593.85400"	"1186.70073"	"1186.69930"	"1.20"	"0.00071"	"7/76"	"7"	"76"	"2702341.84429932"	"HCD"	"MS2"	"7.152272"	"83.1"	"100.000"	"65.5866"	"21682"	"21682"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.3"	""	"106.2"	""	"128.3"	""	"137.4"	"3.1"	"162.7"	"133.6"	""	"600"	"47"	"34.000"	"27.000"	"0.000582265763277834"	""	"9.9E-05"	"0.0005606"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIGISVDPR"	"[R].tIGISVDPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"P41123"	"60S ribosomal protein L13 OS=Rattus norvegicus OX=10116 GN=Rpl13 PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"593.85449"	"1186.70171"	"1186.69930"	"2.03"	"0.00120"	"7/76"	"7"	"76"	"7861654.15759277"	"HCD"	"MS2"	"2.247336"	"195.2"	"100.000"	"65.3092"	"21536"	"21536"	"21519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"275.8"	""	"287.9"	""	"300.9"	""	"325.1"	""	"339.1"	"318.7"	""	"603"	"54"	"34.000"	"27.000"	"0.00011702733534618"	"27"	"9.9E-05"	"0.0006436"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLDDYR"	"[R].yNLDDYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"594.29712"	"1187.58696"	"1187.58942"	"-2.07"	"-0.00123"	"6/60"	"6"	"60"	"865724.971801758"	"HCD"	"MS2"	"21.25793"	"55.2"	"100.000"	"54.7506"	"17286"	"17286"	"17260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.8"	""	"56.8"	""	"71.4"	""	"98.6"	""	"111.0"	"109.8"	""	"391"	"14"	"32.000"	"25.000"	"0.832044897676468"	"14"	"0.008893"	"0.115"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLDDYR"	"[R].yNLDDYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"594.29730"	"1187.58733"	"1187.58942"	"-1.76"	"-0.00105"	"4/60"	"4"	"60"	"783601.411193848"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"55.0794"	"17386"	"17386"	"17358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.4"	""	"58.1"	""	"67.7"	""	"91.0"	"0.9"	"111.0"	"94.8"	""	"391"	"11"	"32.000"	"25.000"	"1.60748438064652"	"14"	"0.006885"	"0.08639"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMTFLTR"	"[R].sSmTFLTR.[Q]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.31799"	"1187.62871"	"1187.62918"	"-0.39"	"-0.00023"	"7/68"	"7"	"68"	"1780311.36401367"	"HCD"	"MS2"	"38.21811"	"107.6"	"100.000"	"41.8185"	"11996"	"11996"	"11970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.2"	""	"121.9"	""	"148.3"	""	"225.4"	"1.0"	"186.3"	"203.7"	""	"563"	"15"	"34.000"	"27.000"	"0.913016022838417"	"13"	"0.002755"	"0.02925"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMTFLTR"	"[R].sSmTFLTR.[Q]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"594.31799"	"1187.62871"	"1187.62918"	"-0.39"	"-0.00023"	"7/68"	"7"	"68"	"1789658.11956787"	"HCD"	"MS2"	"47.83844"	"105.5"	"100.000"	"41.7052"	"11984"	"11984"	"11955"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.4"	""	"107.4"	""	"145.3"	""	"224.6"	""	"180.3"	"205.4"	""	"563"	"13"	"34.000"	"27.000"	"1.44370479593569"	"17"	"0.004213"	"0.04683"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMSHLDR"	"[K].tVMSHLDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"396.55106"	"1187.63861"	"1187.64041"	"-1.51"	"-0.00060"	"6/68"	"6"	"68"	"1874676.33972168"	"HCD"	"MS2"	"56.85202"	"107.2"	"100.000"	"30.2275"	"7354"	"7354"	"7329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.9"	""	"152.7"	""	"163.5"	""	"152.9"	"0.2"	"195.7"	"193.3"	""	"558"	"38"	"34.000"	"27.000"	"0.00414576044198075"	"25"	"0.0009352"	"0.007898"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILFVPTSAPR"	"[K].SILFVPTSAPR.[G]"	""	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.33221"	"1187.65715"	"1187.67828"	"-17.79"	"-0.01057"	"5/94"	"5"	"94"	"886845.944519043"	"HCD"	"MS2"	"56.95136"	"25.0"	"100.000"	"80.8175"	"27827"	"27827"	"27798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"34.6"	""	"31.6"	""	"38.8"	""	"54.2"	"45.1"	"NoQuanLabels"	"592"	"37"	"34.000"	"27.000"	"0.00552448388487063"	"15"	"0.004634"	"0.05431"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAVSDLNR"	"[K].aLAVSDLNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"594.34961"	"1187.69194"	"1187.69455"	"-2.20"	"-0.00131"	"7/68"	"7"	"68"	"1931718.24121094"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"55.8057"	"17682"	"17682"	"17662"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.9"	""	"128.8"	""	"160.9"	""	"152.4"	"2.9"	"186.1"	"190.3"	""	"713"	"48"	"35.000"	"28.000"	"0.0005521531246423"	"24"	"0"	"0.0001608"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDNLALR"	"[R].sAVDNLALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"594.34979"	"1187.69231"	"1187.69455"	"-1.89"	"-0.00112"	"7/78"	"7"	"78"	"1386667.09100342"	"HCD"	"MS2"	"16.87438"	"89.6"	"100.000"	"56.4174"	"17925"	"17925"	"17905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.6"	""	"98.0"	""	"101.7"	""	"164.2"	"11.2"	"180.7"	"187.5"	""	"709"	"32"	"35.000"	"28.000"	"0.0208745075823556"	""	"0"	"0.0002139"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDNLALR"	"[R].sAVDNLALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"594.35022"	"1187.69316"	"1187.69455"	"-1.17"	"-0.00069"	"7/78"	"7"	"78"	"2294219.50610352"	"HCD"	"MS2"	"15.17578"	"114.3"	"100.000"	"55.8201"	"17719"	"17719"	"17705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.9"	""	"114.7"	""	"124.1"	""	"227.1"	"0.1"	"242.1"	"246.9"	""	"664"	"48"	"35.000"	"28.000"	"0.000514207117478944"	""	"0"	"0.0001954"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVDNLALR"	"[R].sAVDNLALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"Q66H86"	"Olfactomedin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Olfml1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"594.35022"	"1187.69316"	"1187.69455"	"-1.17"	"-0.00069"	"7/78"	"7"	"78"	"2112632.37542725"	"HCD"	"MS2"	"0"	"107.5"	"100.000"	"56.1287"	"17810"	"17810"	"17798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.4"	""	"111.3"	""	"106.9"	""	"205.0"	"2.2"	"229.7"	"235.2"	""	"664"	"44"	"35.000"	"28.000"	"0.00123349696060261"	""	"0"	"0.0001077"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAATPGQK"	"[R].gAATPGQk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"594.36035"	"1187.71343"	"1187.71484"	"-1.19"	"-0.00071"	"6/58"	"6"	"58"	"3369300.44213867"	"HCD"	"MS2"	"8.696157"	"225.9"	"100.000"	"24.8420"	"5171"	"5171"	"5150"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.3"	""	"238.5"	""	"271.6"	""	"536.9"	""	"453.4"	"418.0"	""	"699"	"24"	"35.000"	"28.000"	"0.138499172972276"	""	"0.000885"	"0.007743"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAATPGQK"	"[R].gAATPGQk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.1600"	"0.0000"	"1"	"1"	"1"	"594.36096"	"1187.71465"	"1187.71484"	"-0.16"	"-0.00010"	"6/58"	"6"	"58"	"2623149.44824219"	"HCD"	"MS2"	"26.35159"	"173.5"	"100.000"	"24.6786"	"5142"	"5142"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.7"	""	"179.6"	""	"187.4"	""	"408.2"	""	"363.0"	"321.8"	""	"700"	"25"	"35.000"	"28.000"	"0.114569243207593"	""	"0.004959"	"0.06133"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALGAEDR"	"[R].lDALGAEDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"594.82416"	"1188.64104"	"1188.64218"	"-0.96"	"-0.00057"	"7/76"	"7"	"76"	"3101512.29168701"	"HCD"	"MS2"	"21.6531"	"163.6"	"100.000"	"58.3673"	"18752"	"18752"	"18731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.5"	""	"212.0"	""	"237.8"	""	"278.4"	"8.5"	"288.5"	"287.1"	""	"709"	"48"	"35.000"	"28.000"	"0.000527978502048519"	""	"0"	"4.691E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVIENLR"	"[K].dTVIENLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"594.84290"	"1188.67851"	"1188.67857"	"-0.04"	"-0.00003"	"6/68"	"6"	"68"	"1082541.23382568"	"HCD"	"MS2"	"4.619448"	"60.2"	"100.000"	"57.1157"	"18241"	"18241"	"18216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.2"	""	"59.2"	""	"61.9"	""	"105.9"	"0.1"	"130.2"	"143.4"	""	"844"	"37"	"36.000"	"29.000"	"0.00845887195548099"	""	"0.0001686"	"0.00159"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVIENLR"	"[K].dTVIENLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"594.84302"	"1188.67876"	"1188.67857"	"0.16"	"0.00010"	"6/68"	"6"	"68"	"1085887.50146484"	"HCD"	"MS2"	"5.293368"	"58.9"	"100.000"	"57.4382"	"18337"	"18337"	"18314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.5"	""	"52.6"	""	"63.4"	""	"109.7"	""	"127.1"	"137.0"	""	"844"	"37"	"36.000"	"29.000"	"0.00863599636697813"	"28"	"0.0001686"	"0.001643"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MVGGVLVER"	"[R].mVGGVLVER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BN18"	"Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1"	"B0BN18"	"Prefoldin subunit 2 OS=Rattus norvegicus OX=10116 GN=Pfdn2 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"594.85187"	"1188.69646"	"1188.69719"	"-0.62"	"-0.00037"	"6/64"	"6"	"64"	"947851.119506836"	"HCD"	"MS2"	"49.82768"	"57.5"	"100.000"	"68.6912"	"22907"	"22907"	"22886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.2"	""	"69.1"	""	"74.8"	""	"105.0"	""	"116.0"	"115.8"	""	"837"	"5"	"36.000"	"29.000"	"13.7941664546266"	"18"	"0.0007633"	"0.007346"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSGGDGK"	"[R].iPSGGDGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"594.85248"	"1188.69768"	"1188.69886"	"-0.99"	"-0.00059"	"7/62"	"7"	"62"	"4174267.19970703"	"HCD"	"MS2"	"12.06162"	"213.8"	"100.000"	"39.9079"	"11224"	"11224"	"11205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.8"	""	"255.2"	""	"254.1"	""	"375.6"	""	"453.0"	"459.2"	""	"824"	"36"	"36.000"	"29.000"	"0.00963600942327654"	"23"	"0.0001991"	"0.002726"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPSGGDGK"	"[R].iPSGGDGk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"594.85303"	"1188.69878"	"1188.69886"	"-0.07"	"-0.00004"	"6/62"	"6"	"62"	"4155262.39105225"	"HCD"	"MS2"	"17.22529"	"208.0"	"100.000"	"39.8423"	"11231"	"11231"	"11222"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.6"	""	"240.8"	""	"245.1"	""	"367.4"	"0.2"	"451.8"	"453.9"	""	"836"	"34"	"36.000"	"29.000"	"0.0159652705211139"	"22"	"0.0001686"	"0.001278"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"396.91599"	"1188.73340"	"1188.73524"	"-1.55"	"-0.00061"	"5/52"	"5"	"52"	"3367732.68157959"	"HCD"	"MS2"	"58.42572"	"188.3"	"100.000"	"42.9387"	"12453"	"12453"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.9"	""	"212.4"	""	"224.4"	""	"333.9"	""	"348.1"	"426.1"	""	"494"	"26"	"33.000"	"26.000"	"0.0660232582939838"	"24"	"0.002799"	"0.02973"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"396.91614"	"1188.73386"	"1188.73524"	"-1.16"	"-0.00046"	"5/52"	"5"	"52"	"3184870.59423828"	"HCD"	"MS2"	"62.5793"	"175.7"	"100.000"	"42.7569"	"12413"	"12413"	"12383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.3"	""	"200.1"	"3.2"	"221.8"	""	"294.3"	""	"322.2"	"393.9"	""	"484"	"26"	"33.000"	"26.000"	"0.066499038505078"	"22"	"0.003786"	"0.04055"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEAVGGK"	"[R].gIEAVGGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"P32551"	"Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc2 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"594.87067"	"1188.73406"	"1188.73524"	"-1.00"	"-0.00059"	"7/56"	"7"	"56"	"2411864.34674072"	"HCD"	"MS2"	"8.190145"	"186.4"	"100.000"	"46.1669"	"13768"	"13768"	"13745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.1"	""	"260.5"	""	"245.6"	""	"294.1"	"0.5"	"372.2"	"370.7"	""	"484"	"36"	"33.000"	"26.000"	"0.00639462919271911"	"20"	"0.0001991"	"0.002151"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"594.87067"	"1188.73406"	"1188.73524"	"-1.00"	"-0.00059"	"6/52"	"6"	"52"	"8180973.68634033"	"HCD"	"MS2"	"7.285743"	"560.4"	"100.000"	"42.6858"	"12384"	"12384"	"12367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"772.0"	""	"603.0"	""	"729.2"	""	"966.9"	""	"1033.8"	"1222.7"	""	"484"	"39"	"33.000"	"26.000"	"0.00286956037056453"	""	"0.002084"	"0.0187"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"594.87091"	"1188.73454"	"1188.73524"	"-0.59"	"-0.00035"	"6/52"	"6"	"52"	"6137046.38690186"	"HCD"	"MS2"	"5.02297"	"441.9"	"100.000"	"42.8398"	"12412"	"12412"	"12394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"622.0"	""	"481.0"	""	"559.7"	""	"771.9"	""	"804.2"	"958.1"	""	"484"	"39"	"33.000"	"26.000"	"0.00295675517759899"	""	"0.002189"	"0.02102"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"594.87103"	"1188.73479"	"1188.73524"	"-0.38"	"-0.00023"	"6/52"	"6"	"52"	"6362567.77148438"	"HCD"	"MS2"	"1.117267"	"458.7"	"100.000"	"43.1342"	"12532"	"12532"	"12514"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"585.4"	"3.5"	"460.9"	""	"610.7"	""	"741.1"	""	"885.4"	"1072.4"	""	"484"	"38"	"33.000"	"26.000"	"0.0042151726336077"	""	"0.001348"	"0.01098"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADNVK"	"[K].aIADNVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"594.87115"	"1188.73503"	"1188.73524"	"-0.18"	"-0.00011"	"6/52"	"6"	"52"	"4616868.3895874"	"HCD"	"MS2"	"0.6891481"	"345.5"	"100.000"	"42.9961"	"12510"	"12510"	"12491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.3"	""	"334.5"	""	"454.1"	""	"572.8"	""	"643.7"	"846.9"	""	"485"	"39"	"33.000"	"26.000"	"0.00289542115332587"	""	"0.001615"	"0.01363"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].QAFQIGSPWR.[T]"	""	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"595.30518"	"1189.60307"	"1189.61127"	"-6.89"	"-0.00410"	"7/90"	"7"	"90"	"2860675.81750488"	"HCD"	"MS2"	"41.94411"	"39.7"	"100.000"	"112.0189"	"40341"	"40341"	"40319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.0"	""	"67.0"	""	"61.8"	""	"58.6"	"4.4"	"75.0"	"62.7"	"NoQuanLabels"	"527"	"40"	"34.000"	"27.000"	"0.00248760040901341"	"27"	"0.004213"	"0.04607"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFQIGSPWR"	"[R].QAFQIGSPWR.[T]"	""	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"595.30573"	"1189.60417"	"1189.61127"	"-5.96"	"-0.00355"	"7/90"	"7"	"90"	"3831756.29156494"	"HCD"	"MS2"	"38.55134"	"33.1"	"100.000"	"111.9195"	"40287"	"40287"	"40269"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.5"	""	"40.3"	""	"61.3"	""	"47.9"	"0.9"	"62.4"	"54.8"	"NoQuanLabels"	"531"	"49"	"34.000"	"27.000"	"0.000354049940239363"	"26"	"0.00307"	"0.03309"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEVWAHR"	"[R].yEVWAHR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"397.21503"	"1189.63053"	"1189.63156"	"-0.87"	"-0.00034"	"7/48"	"7"	"48"	"2974693.68395996"	"HCD"	"MS2"	"30.99625"	"97.2"	"100.000"	"43.2309"	"12572"	"12572"	"12546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.9"	""	"120.8"	""	"151.2"	""	"142.8"	""	"184.4"	"184.2"	""	"744"	"16"	"35.000"	"28.000"	"0.900622805385858"	"14"	"0.007104"	"0.09107"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVELTATR"	"[K].nGVELTATR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"595.34015"	"1189.67302"	"1189.67382"	"-0.67"	"-0.00040"	"7/88"	"7"	"88"	"1342551.07385254"	"HCD"	"MS2"	"6.692738"	"78.5"	"100.000"	"36.6397"	"9897"	"9897"	"9879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.7"	""	"101.1"	""	"105.1"	""	"120.5"	""	"171.2"	"171.5"	""	"751"	"53"	"35.000"	"28.000"	"0.000196611963937949"	""	"0"	"0.0001762"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"595.34039"	"1189.67351"	"1189.67382"	"-0.26"	"-0.00015"	"7/82"	"7"	"82"	"6234307.48028564"	"HCD"	"MS2"	"23.43414"	"357.5"	"100.000"	"47.5654"	"14366"	"14366"	"14347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"562.3"	""	"475.7"	""	"490.1"	""	"579.4"	""	"624.9"	"657.1"	""	"743"	"48"	"35.000"	"28.000"	"0.000606678798642746"	"26"	"0"	"0.0003383"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"595.34039"	"1189.67351"	"1189.67382"	"-0.26"	"-0.00015"	"7/82"	"7"	"82"	"11196214.177063"	"HCD"	"MS2"	"0.3589054"	"466.2"	"100.000"	"47.2618"	"14243"	"14243"	"14225"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"762.4"	""	"621.1"	""	"701.3"	""	"764.7"	"0.1"	"792.6"	"767.1"	""	"743"	"54"	"35.000"	"28.000"	"0.000153447146989345"	""	"0"	"0.00013"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"595.34045"	"1189.67363"	"1189.67382"	"-0.16"	"-0.00009"	"6/82"	"6"	"82"	"2548057.29443359"	"HCD"	"MS2"	"21.61859"	"135.9"	"100.000"	"47.2942"	"14218"	"14218"	"14196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.8"	""	"159.5"	""	"186.8"	""	"241.0"	""	"263.6"	"247.3"	""	"743"	"37"	"35.000"	"28.000"	"0.00679139230297028"	"27"	"0"	"0.0002437"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"595.34076"	"1189.67424"	"1189.67382"	"0.36"	"0.00021"	"7/82"	"7"	"82"	"6114841.74169922"	"HCD"	"MS2"	"24.46197"	"382.7"	"100.000"	"47.8716"	"14454"	"14454"	"14438"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"613.9"	""	"499.2"	""	"524.2"	""	"603.4"	""	"693.9"	"692.6"	""	"743"	"41"	"35.000"	"28.000"	"0.0030616730972733"	"24"	"9.9E-05"	"0.0004968"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"595.34106"	"1189.67485"	"1189.67382"	"0.87"	"0.00052"	"7/82"	"7"	"82"	"11896859.5541992"	"HCD"	"MS2"	"0.377992"	"480.3"	"100.000"	"47.5795"	"14335"	"14335"	"14318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"789.6"	""	"639.9"	""	"694.1"	""	"779.8"	""	"834.6"	"815.0"	""	"737"	"54"	"35.000"	"28.000"	"0.000150812553110509"	""	"0"	"0.0001259"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDALNATR"	"[R].vTDALNATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"595.34119"	"1189.67510"	"1189.67382"	"1.08"	"0.00064"	"6/82"	"6"	"82"	"2281944.68963623"	"HCD"	"MS2"	"24.47946"	"121.0"	"100.000"	"46.9559"	"14118"	"14118"	"14100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.3"	""	"158.0"	""	"162.5"	""	"208.4"	""	"232.2"	"215.4"	""	"713"	"37"	"35.000"	"28.000"	"0.00660784023747381"	"27"	"0"	"0.0002013"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIDPELR"	"[R].fAIDPELR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"595.34198"	"1189.67668"	"1189.67784"	"-0.97"	"-0.00058"	"5/60"	"5"	"60"	"1409665.17950439"	"HCD"	"MS2"	"19.62058"	"56.5"	"100.000"	"94.8829"	"33492"	"33492"	"33474"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.1"	""	"76.8"	""	"76.3"	""	"86.5"	""	"99.9"	"101.1"	""	"821"	"44"	"36.000"	"29.000"	"0.00148700750850055"	"24"	"9.9E-05"	"0.0009702"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIDPELR"	"[R].fAIDPELR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"595.34204"	"1189.67681"	"1189.67784"	"-0.87"	"-0.00052"	"5/60"	"5"	"60"	"1359189.78198242"	"HCD"	"MS2"	"22.30613"	"54.2"	"100.000"	"94.8501"	"33512"	"33512"	"33496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.4"	""	"80.6"	""	"73.7"	""	"90.5"	""	"99.3"	"84.2"	""	"821"	"44"	"36.000"	"29.000"	"0.00148358748613561"	"25"	"0.0001991"	"0.003005"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPESDK"	"[R].vGPESDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"595.34473"	"1189.68218"	"1189.68287"	"-0.59"	"-0.00035"	"5/52"	"5"	"52"	"5605387.12060547"	"HCD"	"MS2"	"7.03598"	"374.2"	"100.000"	"32.6192"	"8307"	"8307"	"8283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"308.5"	""	"328.5"	""	"273.3"	""	"847.8"	""	"1042.3"	"770.6"	""	"791"	"33"	"35.000"	"28.000"	"0.0204242674047104"	""	"0.003786"	"0.04035"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGPESDK"	"[R].vGPESDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"595.34497"	"1189.68266"	"1189.68287"	"-0.18"	"-0.00010"	"5/52"	"5"	"52"	"3418857.35461426"	"HCD"	"MS2"	"9.695196"	"241.0"	"100.000"	"32.6741"	"8292"	"8292"	"8273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.7"	""	"197.9"	""	"177.3"	""	"549.8"	""	"664.5"	"494.5"	""	"800"	"33"	"36.000"	"29.000"	"0.0223388077894732"	""	"0.002799"	"0.02975"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPGESTK"	"[K].iPGESTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"595.36261"	"1189.71794"	"1189.71926"	"-1.11"	"-0.00066"	"6/52"	"6"	"52"	"8375549.49401855"	"HCD"	"MS2"	"0.9074975"	"471.8"	"100.000"	"42.3204"	"12201"	"12201"	"12184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"670.9"	""	"633.8"	""	"640.0"	""	"760.8"	""	"893.0"	"877.0"	""	"613"	"24"	"34.000"	"27.000"	"0.1231488835252"	"23"	"0.006157"	"0.07526"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPITSEK"	"[K].gPITSEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"595.36273"	"1189.71819"	"1189.71926"	"-0.90"	"-0.00054"	"9/52"	"9"	"52"	"2052284.51428223"	"HCD"	"MS2"	"25.84015"	"172.9"	"100.000"	"36.9662"	"10030"	"10030"	"10004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"207.3"	""	"193.1"	""	"235.7"	""	"289.2"	"3.0"	"340.0"	"372.8"	""	"614"	"20"	"34.000"	"27.000"	"0.287831536126245"	"23"	"0.00307"	"0.03369"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPGESTK"	"[K].iPGESTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"595.36292"	"1189.71855"	"1189.71926"	"-0.59"	"-0.00035"	"6/52"	"6"	"52"	"7702798.12097168"	"HCD"	"MS2"	"0"	"420.2"	"100.000"	"42.1729"	"12174"	"12174"	"12161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"588.6"	""	"574.9"	""	"583.1"	""	"653.2"	""	"795.2"	"795.8"	""	"614"	"24"	"34.000"	"27.000"	"0.11779812436613"	"24"	"0.005832"	"0.07152"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPITSEK"	"[K].gPITSEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"595.36298"	"1189.71868"	"1189.71926"	"-0.49"	"-0.00029"	"4/52"	"4"	"52"	"2023667.76074219"	"HCD"	"MS2"	"26.57991"	"171.6"	"100.000"	"36.8794"	"10032"	"10032"	"10010"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.6"	""	"183.2"	""	"209.4"	""	"294.2"	"6.6"	"356.7"	"363.6"	""	"614"	"14"	"34.000"	"27.000"	"1.25354051604136"	"18"	"0.003786"	"0.04075"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELLDK"	"[R].gGELLDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"595.36298"	"1189.71868"	"1189.71926"	"-0.49"	"-0.00029"	"6/54"	"6"	"54"	"3445507.98522949"	"HCD"	"MS2"	"29.42003"	"280.1"	"100.000"	"55.8357"	"17694"	"17694"	"17676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"398.8"	""	"342.2"	"2.5"	"348.6"	""	"481.9"	""	"561.3"	"525.9"	""	"614"	"26"	"34.000"	"27.000"	"0.0787296599210939"	""	"0.002419"	"0.02265"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELLDK"	"[R].gGELLDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"595.36334"	"1189.71941"	"1189.71926"	"0.12"	"0.00007"	"6/54"	"6"	"54"	"3434506.56665039"	"HCD"	"MS2"	"24.83511"	"273.1"	"100.000"	"55.4925"	"17589"	"17589"	"17568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"395.0"	""	"348.6"	""	"363.6"	""	"460.6"	""	"496.7"	"530.3"	""	"616"	"34"	"34.000"	"27.000"	"0.0130482033543259"	""	"0.001348"	"0.01058"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGELLDK"	"[R].gGELLDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"Q63531"	"Ribosomal protein S6 kinase alpha-1 OS=Rattus norvegicus OX=10116 GN=Rps6ka1 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"595.36340"	"1189.71953"	"1189.71926"	"0.23"	"0.00014"	"5/54"	"5"	"54"	"1642509.74267578"	"HCD"	"MS2"	"0"	"135.5"	"100.000"	"55.7697"	"17699"	"17699"	"17686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.7"	""	"164.8"	""	"180.8"	""	"211.7"	""	"281.3"	"264.7"	""	"616"	"23"	"34.000"	"27.000"	"0.146740743936068"	""	"0.009275"	"0.1195"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLLDAK"	"[K].dGLLDAk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"595.36365"	"1189.72002"	"1189.71926"	"0.64"	"0.00038"	"6/56"	"6"	"56"	"1302778.88317871"	"HCD"	"MS2"	"13.84544"	"88.4"	"100.000"	"63.9091"	"21000"	"21000"	"20979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.5"	""	"97.8"	""	"101.7"	""	"170.3"	""	"181.0"	"176.2"	""	"615"	"14"	"34.000"	"27.000"	"1.24693874650378"	"17"	"0.008364"	"0.107"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLLDAK"	"[K].dGLLDAk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"595.36432"	"1189.72136"	"1189.71926"	"1.77"	"0.00105"	"5/56"	"5"	"56"	"1367781.85681152"	"HCD"	"MS2"	"18.65227"	"101.5"	"100.000"	"64.0112"	"21009"	"21009"	"20988"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.8"	""	"112.6"	""	"111.7"	""	"197.1"	""	"195.3"	"208.9"	""	"601"	"17"	"34.000"	"27.000"	"0.58323620621663"	"19"	"0.006845"	"0.0858"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQNISK"	"[R].aAQNISk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"595.36908"	"1189.73088"	"1189.73049"	"0.33"	"0.00019"	"5/56"	"5"	"56"	"2354214.93634033"	"HCD"	"MS2"	"0"	"186.9"	"100.000"	"31.6299"	"7909"	"7909"	"7888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"358.3"	""	"292.7"	""	"238.3"	""	"246.3"	""	"234.6"	"395.7"	""	"472"	"20"	"33.000"	"26.000"	"0.236544036186384"	"18"	"0.003317"	"0.03726"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"595.38092"	"1189.75456"	"1189.75565"	"-0.91"	"-0.00054"	"6/60"	"6"	"60"	"1594055.71765137"	"HCD"	"MS2"	"58.55186"	"130.8"	"100.000"	"63.3163"	"20759"	"20759"	"20734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.2"	""	"135.4"	""	"160.8"	""	"232.6"	""	"265.6"	"255.4"	""	"255"	"28"	"31.000"	"24.000"	"0.0220551585799925"	""	"0.001217"	"0.009293"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"595.38104"	"1189.75481"	"1189.75565"	"-0.70"	"-0.00042"	"6/60"	"6"	"60"	"1621138.24981689"	"HCD"	"MS2"	"54.95405"	"138.5"	"100.000"	"63.3432"	"20738"	"20738"	"20715"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.4"	""	"160.8"	""	"166.6"	""	"240.4"	""	"269.2"	"264.6"	""	"255"	"27"	"31.000"	"24.000"	"0.0258529546738963"	""	"0.001406"	"0.01155"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"595.38104"	"1189.75481"	"1189.75564"	"-0.70"	"-0.00042"	"6/52"	"6"	"52"	"4579985.0380249"	"HCD"	"MS2"	"1.099313"	"328.7"	"100.000"	"61.7796"	"20135"	"20135"	"20118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.7"	""	"333.5"	""	"386.5"	""	"665.7"	""	"692.6"	"730.9"	""	"255"	"40"	"31.000"	"24.000"	"0.00138838586900013"	""	"0.000885"	"0.007668"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"595.38110"	"1189.75493"	"1189.75564"	"-0.60"	"-0.00036"	"6/52"	"6"	"52"	"3153465.61303711"	"HCD"	"MS2"	"0.9428216"	"226.8"	"100.000"	"61.9067"	"20153"	"20153"	"20139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.4"	""	"236.0"	""	"255.8"	""	"461.1"	"0.7"	"466.8"	"515.5"	""	"255"	"39"	"31.000"	"24.000"	"0.00158675613000852"	""	"0.0007633"	"0.007375"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"595.38110"	"1189.75493"	"1189.75565"	"-0.60"	"-0.00036"	"6/60"	"6"	"60"	"3884470.28076172"	"HCD"	"MS2"	"4.909047"	"264.4"	"100.000"	"65.9551"	"21832"	"21832"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"392.4"	""	"302.6"	""	"331.8"	""	"434.6"	"1.6"	"586.9"	"458.9"	""	"255"	"35"	"31.000"	"24.000"	"0.00361834676126298"	""	"0.001316"	"0.01038"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAIEK"	"[R].tAVAIEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"595.38116"	"1189.75505"	"1189.75564"	"-0.50"	"-0.00030"	"10/58"	"10"	"58"	"2049822.64385986"	"HCD"	"MS2"	"16.99402"	"152.7"	"100.000"	"49.5627"	"15141"	"15141"	"15117"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"228.7"	""	"214.3"	""	"223.6"	""	"234.2"	"2.2"	"273.4"	"269.2"	""	"255"	"29"	"31.000"	"24.000"	"0.0150490881045595"	""	"0.0001991"	"0.005847"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3095"	"0.0000"	"1"	"1"	"1"	"595.38147"	"1189.75566"	"1189.75564"	"0.02"	"0.00001"	"6/52"	"6"	"52"	"8336085.12213135"	"HCD"	"MS2"	"0.8358003"	"540.6"	"100.000"	"61.5005"	"20024"	"20024"	"20006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"533.1"	""	"561.0"	""	"637.2"	""	"1179.8"	""	"1128.2"	"1101.2"	""	"255"	"42"	"31.000"	"24.000"	"0.00085410287700607"	""	"0.0001991"	"0.004664"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"595.38159"	"1189.75591"	"1189.75564"	"0.22"	"0.00013"	"6/52"	"6"	"52"	"1793973.2611084"	"HCD"	"MS2"	"20.52695"	"131.7"	"100.000"	"61.2105"	"19906"	"19906"	"19888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.9"	""	"166.3"	""	"155.6"	""	"276.4"	""	"243.2"	"257.8"	""	"255"	"37"	"31.000"	"24.000"	"0.00267614835161999"	""	"0.0001991"	"0.00268"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"595.38165"	"1189.75603"	"1189.75564"	"0.32"	"0.00019"	"6/52"	"6"	"52"	"2343325.08099365"	"HCD"	"MS2"	"15.41881"	"166.5"	"100.000"	"61.3210"	"19920"	"19920"	"19896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.6"	""	"197.6"	""	"204.8"	""	"379.1"	""	"324.1"	"305.7"	""	"255"	"35"	"31.000"	"24.000"	"0.00365182691163089"	""	"0.0001991"	"0.00296"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTIGAK"	"[K].eLTIGAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"P05964"	"Protein S100-A6 OS=Rattus norvegicus OX=10116 GN=S100a6 PE=1 SV=3"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"595.38165"	"1189.75603"	"1189.75564"	"0.32"	"0.00019"	"6/52"	"6"	"52"	"8735152.87744141"	"HCD"	"MS2"	"0.9049553"	"572.3"	"100.000"	"61.6196"	"20038"	"20038"	"20021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"589.6"	""	"586.3"	""	"680.0"	""	"1261.2"	""	"1142.3"	"1183.0"	""	"255"	"40"	"31.000"	"24.000"	"0.00142400064092021"	""	"0.001453"	"0.01158"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"595.38171"	"1189.75615"	"1189.75565"	"0.43"	"0.00025"	"6/60"	"6"	"60"	"4123225.68078613"	"HCD"	"MS2"	"1.452724"	"278.6"	"100.000"	"65.9654"	"21803"	"21803"	"21785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"394.2"	""	"322.0"	""	"350.4"	""	"489.7"	""	"584.8"	"503.0"	""	"255"	"35"	"31.000"	"24.000"	"0.00366868297878798"	""	"0.001261"	"0.009841"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVAIEK"	"[R].tAVAIEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"595.38177"	"1189.75627"	"1189.75564"	"0.53"	"0.00031"	"6/58"	"6"	"58"	"1921262.91369629"	"HCD"	"MS2"	"24.42292"	"143.3"	"100.000"	"49.1933"	"15025"	"15025"	"15006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.0"	""	"179.5"	""	"200.8"	""	"239.9"	""	"258.4"	"264.8"	""	"255"	"33"	"31.000"	"24.000"	"0.00687876043706788"	""	"0.0005161"	"0.006937"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"595.38184"	"1189.75640"	"1189.75565"	"0.63"	"0.00037"	"6/60"	"6"	"60"	"3521188.45874023"	"HCD"	"MS2"	"15.00902"	"231.7"	"100.000"	"65.6590"	"21678"	"21678"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"347.0"	""	"284.5"	""	"283.4"	""	"398.0"	""	"470.9"	"418.4"	""	"255"	"34"	"31.000"	"24.000"	"0.00515834261914239"	""	"0.0001991"	"0.005229"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVILSK"	"[K].nGVILSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"595.38190"	"1189.75652"	"1189.75565"	"0.73"	"0.00044"	"6/60"	"6"	"60"	"3477756.43951416"	"HCD"	"MS2"	"12.01955"	"221.7"	"100.000"	"65.6603"	"21712"	"21712"	"21696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.5"	""	"278.3"	""	"273.2"	""	"388.8"	""	"459.8"	"374.2"	""	"255"	"36"	"31.000"	"24.000"	"0.00354413441639309"	""	"0.001103"	"0.009077"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADILDQMR"	"[R].aDILDQMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T5"	"Aspartoacylase OS=Rattus norvegicus OX=10116 GN=Aspa PE=1 SV=2"	"Q9R1T5"	"Aspartoacylase OS=Rattus norvegicus OX=10116 GN=Aspa PE=1 SV=2"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"595.82343"	"1190.63957"	"1190.64007"	"-0.42"	"-0.00025"	"6/66"	"6"	"66"	"532164.126220703"	"HCD"	"MS2"	"35.63833"	"33.5"	"100.000"	"82.0213"	"28342"	"28342"	"28318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.0"	""	"40.5"	""	"50.6"	""	"56.4"	""	"56.7"	"64.9"	""	"825"	"18"	"36.000"	"29.000"	"0.61294845244339"	"25"	"0.001488"	"0.01202"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADILDQMR"	"[R].aDILDQMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T5"	"Aspartoacylase OS=Rattus norvegicus OX=10116 GN=Aspa PE=1 SV=2"	"Q9R1T5"	"Aspartoacylase OS=Rattus norvegicus OX=10116 GN=Aspa PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"595.82379"	"1190.64031"	"1190.64007"	"0.20"	"0.00012"	"5/66"	"5"	"66"	"527131.823181152"	"HCD"	"MS2"	"44.29288"	"35.2"	"100.000"	"81.9594"	"28289"	"28289"	"28263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.1"	""	"46.4"	""	"41.5"	""	"56.9"	""	"64.3"	"64.6"	""	"829"	"20"	"36.000"	"29.000"	"0.432040574483525"	"18"	"0.0001991"	"0.005644"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTNPNFVR"	"[R].nTNPNFVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"595.82721"	"1190.64714"	"1190.64794"	"-0.67"	"-0.00040"	"5/70"	"5"	"70"	"4929262.18566895"	"HCD"	"MS2"	"10.39908"	"250.3"	"100.000"	"33.0857"	"8460"	"8460"	"8434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.1"	""	"359.5"	""	"349.9"	""	"449.1"	""	"470.7"	"455.8"	""	"805"	"29"	"36.000"	"29.000"	"0.048058021204687"	"22"	"0.002525"	"0.02474"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTNPNFVR"	"[R].nTNPNFVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"595.82739"	"1190.64751"	"1190.64794"	"-0.36"	"-0.00021"	"5/70"	"5"	"70"	"5040921.17486572"	"HCD"	"MS2"	"13.36979"	"257.9"	"100.000"	"32.9794"	"8454"	"8454"	"8431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.1"	""	"334.9"	""	"362.6"	""	"491.9"	""	"496.9"	"475.1"	""	"801"	"34"	"36.000"	"29.000"	"0.0168889449623147"	"19"	"0.001951"	"0.01652"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAVDSVVR"	"[R].tDAVDSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"595.83191"	"1190.65654"	"1190.65783"	"-1.08"	"-0.00065"	"7/74"	"7"	"74"	"2083977.18588257"	"HCD"	"MS2"	"27.32609"	"131.3"	"100.000"	"45.4076"	"13458"	"13458"	"13440"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.0"	""	"151.5"	""	"153.5"	""	"217.7"	""	"279.3"	"277.9"	""	"831"	"39"	"36.000"	"29.000"	"0.00546475917775875"	""	"0"	"0.0002505"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSEVGSVR"	"[K].dLSEVGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"595.83209"	"1190.65691"	"1190.65783"	"-0.78"	"-0.00046"	"6/76"	"6"	"76"	"2569033.32073975"	"HCD"	"MS2"	"35.70142"	"162.8"	"100.000"	"49.4143"	"15115"	"15115"	"15095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"247.7"	""	"229.8"	""	"210.5"	""	"243.6"	"1.4"	"293.5"	"315.5"	""	"829"	"35"	"36.000"	"29.000"	"0.0126918384326479"	"21"	"9.9E-05"	"0.0004275"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSEVGSVR"	"[K].dLSEVGSVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"595.83258"	"1190.65788"	"1190.65783"	"0.04"	"0.00003"	"6/76"	"6"	"76"	"2542081.59967041"	"HCD"	"MS2"	"34.17261"	"147.4"	"100.000"	"49.7674"	"15224"	"15224"	"15205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.0"	""	"202.7"	""	"191.5"	""	"214.3"	"0.3"	"270.7"	"298.5"	""	"838"	"36"	"36.000"	"29.000"	"0.011727731729268"	"21"	"0"	"0.000228"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAVDSVVR"	"[R].tDAVDSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"595.83289"	"1190.65849"	"1190.65783"	"0.56"	"0.00033"	"7/74"	"7"	"74"	"2256778.1552124"	"HCD"	"MS2"	"27.41519"	"136.2"	"100.000"	"45.1442"	"13385"	"13385"	"13360"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.7"	""	"148.0"	""	"158.4"	""	"241.0"	""	"278.2"	"297.3"	""	"837"	"39"	"36.000"	"29.000"	"0.00512501879392423"	""	"0"	"0.0002619"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPLLAR"	"[K].dYNPLLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT1"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1"	"Q5XIT1"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"595.83948"	"1190.67168"	"1190.67309"	"-1.18"	"-0.00071"	"6/66"	"6"	"66"	"955337.82635498"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"66.7065"	"22101"	"22101"	"22083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.4"	""	"64.6"	""	"62.5"	""	"79.1"	""	"102.1"	"95.5"	""	"876"	"32"	"36.000"	"29.000"	"0.0270691183260626"	"16"	"0.001615"	"0.01325"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPLLAR"	"[K].dYNPLLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT1"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1"	"Q5XIT1"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"595.83997"	"1190.67266"	"1190.67309"	"-0.36"	"-0.00022"	"6/66"	"6"	"66"	"1569486.41638184"	"HCD"	"MS2"	"38.04563"	"106.3"	"100.000"	"66.4397"	"22028"	"22028"	"22013"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.6"	""	"126.5"	""	"142.6"	""	"178.7"	""	"218.5"	"207.9"	""	"846"	"30"	"36.000"	"29.000"	"0.0453252666115508"	"23"	"0.0001991"	"0.002113"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPLLAR"	"[K].dYNPLLAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT1"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1"	"Q5XIT1"	"Microtubule-associated protein RP/EB family member 3 OS=Rattus norvegicus OX=10116 GN=Mapre3 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"595.83997"	"1190.67266"	"1190.67309"	"-0.36"	"-0.00022"	"5/66"	"5"	"66"	"1647563.64556885"	"HCD"	"MS2"	"53.56117"	"112.8"	"100.000"	"66.4200"	"21987"	"21987"	"21976"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.9"	""	"147.5"	""	"151.8"	""	"182.0"	""	"230.7"	"222.8"	""	"846"	"30"	"36.000"	"29.000"	"0.0383124890179939"	"20"	"0.0001991"	"0.005905"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISASLLDSR"	"[R].iSASLLDSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVL2"	"ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1"	"Q5FVL2"	"ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"595.85083"	"1190.69438"	"1190.69422"	"0.14"	"0.00008"	"7/76"	"7"	"76"	"414009.462341309"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"77.4548"	"26488"	"26488"	"26474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"30.8"	""	"37.2"	""	"48.5"	""	"50.9"	"54.1"	""	"687"	"18"	"35.000"	"28.000"	"0.582005034453657"	"21"	"0.0001991"	"0.004154"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISASLLDSR"	"[R].iSASLLDSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVL2"	"ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1"	"Q5FVL2"	"ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"595.85101"	"1190.69475"	"1190.69422"	"0.45"	"0.00027"	"7/76"	"7"	"76"	"442928.218505859"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"77.3627"	"26422"	"26422"	"26408"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"40.4"	""	"37.5"	""	"47.1"	""	"65.1"	"55.7"	""	"687"	"25"	"35.000"	"28.000"	"0.110643712980586"	"24"	"0.0001686"	"0.001728"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLGTAK"	"[R].dQLGTAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"595.86029"	"1190.71330"	"1190.71451"	"-1.01"	"-0.00060"	"9/66"	"9"	"66"	"5455013.78710938"	"HCD"	"MS2"	"44.13266"	"388.6"	"100.000"	"35.8905"	"9634"	"9634"	"9617"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"432.5"	""	"388.1"	""	"438.1"	""	"713.0"	""	"871.5"	"857.2"	""	"484"	"25"	"33.000"	"26.000"	"0.0833326832447279"	"26"	"0.006384"	"0.07969"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAATGAVK"	"[K].dAATGAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"595.86035"	"1190.71343"	"1190.71451"	"-0.91"	"-0.00054"	"7/62"	"7"	"62"	"4471788.95819092"	"HCD"	"MS2"	"0"	"327.4"	"100.000"	"31.8481"	"7998"	"7998"	"7979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"537.0"	""	"455.6"	""	"441.0"	""	"491.8"	""	"519.4"	"655.8"	""	"484"	"47"	"33.000"	"26.000"	"0.000467536332718095"	"26"	"0.0001686"	"0.001409"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVAADSK"	"[R].aAVAADSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"595.86041"	"1190.71355"	"1190.71451"	"-0.81"	"-0.00048"	"7/58"	"7"	"58"	"1255977.74462891"	"HCD"	"MS2"	"32.89288"	"104.1"	"100.000"	"31.1089"	"7665"	"7665"	"7636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.4"	""	"143.1"	""	"157.9"	""	"146.3"	"0.1"	"196.1"	"181.9"	""	"484"	"52"	"33.000"	"26.000"	"0.000146492491690447"	""	"0"	"0.0002408"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISAQDAK"	"[R].iSAQDAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"595.86047"	"1190.71367"	"1190.71451"	"-0.70"	"-0.00042"	"10/60"	"10"	"60"	"3450551.15283203"	"HCD"	"MS2"	"0"	"275.3"	"100.000"	"37.3616"	"10191"	"10191"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"420.1"	""	"294.8"	""	"360.9"	""	"456.9"	"4.8"	"509.6"	"563.1"	""	"484"	"33"	"33.000"	"26.000"	"0.0131164215477193"	"21"	"0.001615"	"0.01326"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISAQDAK"	"[R].iSAQDAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"595.86047"	"1190.71367"	"1190.71451"	"-0.70"	"-0.00042"	"10/60"	"10"	"60"	"9127210.26519775"	"HCD"	"MS2"	"0"	"652.4"	"100.000"	"37.0335"	"10095"	"10095"	"10074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1030.5"	""	"758.1"	""	"820.9"	""	"1108.9"	""	"1176.4"	"1289.4"	""	"484"	"33"	"33.000"	"26.000"	"0.0114502604668678"	"20"	"0.002035"	"0.01852"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLGTAK"	"[R].dQLGTAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"595.86053"	"1190.71379"	"1190.71451"	"-0.60"	"-0.00036"	"6/66"	"6"	"66"	"5055248.9465332"	"HCD"	"MS2"	"38.75502"	"352.1"	"100.000"	"36.0208"	"9649"	"9649"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"389.3"	""	"368.1"	""	"400.7"	""	"613.0"	""	"800.4"	"783.9"	""	"484"	"25"	"33.000"	"26.000"	"0.0827590250883175"	"26"	"0.005507"	"0.07012"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEANGK"	"[K].tIEANGk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"595.86102"	"1190.71477"	"1190.71451"	"0.22"	"0.00013"	"6/56"	"6"	"56"	"1593154.19390869"	"HCD"	"MS2"	"14.45104"	"132.8"	"100.000"	"33.5630"	"8692"	"8692"	"8665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.2"	""	"144.9"	""	"167.9"	""	"234.0"	"14.6"	"246.1"	"251.9"	""	"493"	"13"	"33.000"	"26.000"	"1.27296635025566"	"23"	"0.004751"	"0.05616"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISAQDAK"	"[R].iSAQDAk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"595.86102"	"1190.71477"	"1190.71451"	"0.22"	"0.00013"	"10/60"	"10"	"60"	"6482857.94561768"	"HCD"	"MS2"	"2.270368"	"466.7"	"100.000"	"37.0721"	"10073"	"10073"	"10052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"702.1"	""	"511.3"	""	"550.0"	""	"815.5"	""	"884.4"	"971.9"	""	"493"	"29"	"33.000"	"26.000"	"0.0313196516933906"	"21"	"0.002834"	"0.02985"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAATGAVK"	"[K].dAATGAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"595.86151"	"1190.71575"	"1190.71451"	"1.04"	"0.00062"	"7/62"	"7"	"62"	"4293985.12695313"	"HCD"	"MS2"	"0"	"311.7"	"100.000"	"31.9217"	"7991"	"7991"	"7969"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"538.7"	""	"423.1"	""	"417.4"	""	"461.9"	""	"493.5"	"619.0"	""	"484"	"37"	"33.000"	"26.000"	"0.00538040993537639"	"26"	"0.0001991"	"0.002705"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVAADSK"	"[R].aAVAADSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"595.86157"	"1190.71587"	"1190.71451"	"1.14"	"0.00068"	"6/58"	"6"	"58"	"906013.959289551"	"HCD"	"MS2"	"0"	"81.0"	"100.000"	"30.9039"	"7620"	"7620"	"7595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.4"	""	"105.2"	""	"109.4"	""	"126.5"	"0.4"	"158.6"	"144.9"	""	"484"	"36"	"33.000"	"26.000"	"0.00623469719994623"	""	"9.9E-05"	"0.0004157"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLPWER"	"[K].dFLPWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"596.32129"	"1191.63530"	"1191.63597"	"-0.56"	"-0.00034"	"9/58"	"9"	"58"	"521124.545959473"	"HCD"	"MS2"	"27.26443"	"29.2"	"100.000"	"104.3832"	"37333"	"37333"	"37326"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"30.0"	""	"34.2"	""	"59.9"	""	"72.5"	"58.9"	""	"757"	"11"	"35.000"	"28.000"	"3.28901522484865"	"20"	"0.00981"	"0.1318"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLPWER"	"[K].dFLPWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"596.32147"	"1191.63567"	"1191.63597"	"-0.26"	"-0.00015"	"10/58"	"10"	"58"	"758474.29498291"	"HCD"	"MS2"	"15.51814"	"47.3"	"100.000"	"104.6569"	"37442"	"37442"	"37428"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.5"	""	"47.9"	""	"53.2"	""	"85.7"	""	"103.4"	"114.7"	""	"754"	"20"	"35.000"	"28.000"	"0.398420200973549"	"20"	"0.004998"	"0.06332"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLPWER"	"[K].dFLPWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"596.32166"	"1191.63603"	"1191.63597"	"0.05"	"0.00003"	"4/58"	"4"	"58"	"600248.409606934"	"HCD"	"MS2"	"26.64334"	"34.9"	"100.000"	"104.6467"	"37457"	"37457"	"37447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"34.0"	""	"33.2"	""	"72.1"	""	"83.3"	"75.0"	""	"754"	"19"	"35.000"	"28.000"	"0.498128454088339"	"20"	"0.006033"	"0.0739"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFLPWER"	"[K].dFLPWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"596.32227"	"1191.63725"	"1191.63597"	"1.07"	"0.00064"	"5/58"	"5"	"58"	"646474.756591797"	"HCD"	"MS2"	"24.7569"	"40.3"	"100.000"	"104.9293"	"37569"	"37569"	"37556"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.2"	""	"45.5"	""	"43.2"	""	"81.6"	""	"78.7"	"95.6"	""	"778"	"23"	"35.000"	"28.000"	"0.196765793519211"	"24"	"0.00329"	"0.03556"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYVTPVNR"	"[R].nYVTPVNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"596.33716"	"1191.66704"	"1191.66834"	"-1.09"	"-0.00065"	"6/70"	"6"	"70"	"3517548.25219727"	"HCD"	"MS2"	"35.26733"	"230.7"	"100.000"	"35.6400"	"9531"	"9531"	"9512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.9"	""	"274.2"	""	"294.2"	""	"374.9"	""	"447.9"	"463.3"	""	"766"	"33"	"35.000"	"28.000"	"0.0182053391536095"	"25"	"0.001615"	"0.01411"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYVTPVNR"	"[R].nYVTPVNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"596.33789"	"1191.66850"	"1191.66834"	"0.14"	"0.00008"	"7/70"	"7"	"70"	"3021943.7880249"	"HCD"	"MS2"	"39.80641"	"203.9"	"100.000"	"35.7386"	"9534"	"9534"	"9517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"308.6"	""	"221.7"	""	"253.3"	""	"329.4"	"0.5"	"390.6"	"430.0"	""	"760"	"24"	"35.000"	"28.000"	"0.139889009984162"	"24"	"0.002525"	"0.0247"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].LSILYPATTGR.[N]"	""	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"596.34003"	"1191.67278"	"1191.67320"	"-0.35"	"-0.00021"	"6/94"	"6"	"94"	"1221535.55895996"	"HCD"	"MS2"	"11.62051"	"22.3"	"100.000"	"67.0222"	"22261"	"22261"	"22247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.0"	""	"26.1"	""	"33.7"	""	"28.3"	"1.8"	"44.9"	"48.0"	"NoQuanLabels"	"717"	"53"	"35.000"	"28.000"	"0.000192525898998736"	"22"	"9.9E-05"	"0.0005926"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].LSILYPATTGR.[N]"	""	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"596.34021"	"1191.67314"	"1191.67320"	"-0.05"	"-0.00003"	"6/94"	"6"	"94"	"861909.446289063"	"HCD"	"MS2"	"13.3916"	"21.6"	"100.000"	"67.1363"	"22276"	"22276"	"22255"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"29.5"	""	"30.8"	""	"30.5"	"0.7"	"43.8"	"44.6"	"NoQuanLabels"	"732"	"56"	"35.000"	"28.000"	"8.61948037905938E-05"	"24"	"9.9E-05"	"0.0009407"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].LSILYPATTGR.[N]"	""	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"596.34027"	"1191.67327"	"1191.67320"	"0.06"	"0.00003"	"4/94"	"4"	"94"	"413201.100952148"	"HCD"	"MS2"	"18.25546"	"20.5"	"100.000"	"67.3608"	"22399"	"22399"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"19.3"	""	"26.8"	""	"36.2"	""	"44.0"	"42.0"	"NoQuanLabels"	"732"	"13"	"35.000"	"28.000"	"1.68842232289099"	"15"	"0.005832"	"0.07214"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].LSILYPATTGR.[N]"	""	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"596.34058"	"1191.67388"	"1191.67320"	"0.57"	"0.00034"	"6/94"	"6"	"94"	"1310007.43579102"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"66.8351"	"22153"	"22153"	"22134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"34.9"	""	"36.8"	""	"41.1"	""	"49.9"	"49.6"	"NoQuanLabels"	"734"	"57"	"35.000"	"28.000"	"7.99219486453609E-05"	"24"	"9.9E-05"	"0.0006704"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSILYPATTGR"	"[K].LSILYPATTGR.[N]"	""	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"596.34058"	"1191.67388"	"1191.67320"	"0.57"	"0.00034"	"5/94"	"5"	"94"	"1168711.82128906"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"66.7374"	"22146"	"22146"	"22131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"56.3"	""	"55.1"	""	"65.5"	""	"90.4"	"73.2"	"NoQuanLabels"	"734"	"35"	"35.000"	"28.000"	"0.0114199989571791"	"21"	"0.0001991"	"0.00303"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEANGK"	"[K].tIEAnGk.[M]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"596.35107"	"1191.69487"	"1191.69852"	"-3.07"	"-0.00183"	"10/56"	"10"	"56"	"2441051.54998779"	"HCD"	"MS2"	"26.80064"	"217.6"	"100.000"	"37.4853"	"10242"	"10242"	"10219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"282.6"	""	"277.9"	""	"277.2"	""	"343.6"	""	"418.1"	"466.8"	""	"683"	"26"	"35.000"	"28.000"	"0.079871291700217"	""	"0.002588"	"0.02682"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLVIMER"	"[K].tTLVIMER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"596.35150"	"1191.69573"	"1191.69686"	"-0.95"	"-0.00057"	"6/68"	"6"	"68"	"667025.128295898"	"HCD"	"MS2"	"55.76619"	"45.2"	"100.000"	"70.7847"	"23790"	"23790"	"23770"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"60.3"	""	"59.6"	""	"69.4"	""	"90.0"	"85.3"	""	"638"	"5"	"35.000"	"28.000"	"11.0609055294358"	"17"	"0.00452"	"0.05258"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLVIMER"	"[K].tTLVIMER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"596.35168"	"1191.69609"	"1191.69686"	"-0.64"	"-0.00038"	"6/68"	"6"	"68"	"1438432.80389404"	"HCD"	"MS2"	"36.72636"	"71.9"	"100.000"	"70.4263"	"23611"	"23611"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.2"	""	"111.9"	""	"102.4"	""	"102.1"	"1.0"	"124.2"	"131.6"	""	"638"	"32"	"35.000"	"28.000"	"0.0211247064680862"	"21"	"0.0001686"	"0.001423"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEANGK"	"[K].tIEAnGk.[M]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"596.35193"	"1191.69658"	"1191.69852"	"-1.63"	"-0.00097"	"10/56"	"10"	"56"	"2313042.39013672"	"HCD"	"MS2"	"20.95524"	"210.7"	"100.000"	"37.4191"	"10252"	"10252"	"10229"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.4"	""	"275.4"	""	"248.1"	""	"314.3"	""	"411.8"	"467.2"	""	"639"	"28"	"35.000"	"28.000"	"0.0542588846961528"	""	"0.002525"	"0.02362"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLVIMER"	"[K].tTLVIMER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"596.35217"	"1191.69707"	"1191.69686"	"0.18"	"0.00010"	"6/68"	"6"	"68"	"1263407.74139404"	"HCD"	"MS2"	"35.94246"	"76.6"	"100.000"	"70.4715"	"23663"	"23663"	"23645"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.4"	""	"129.6"	""	"115.9"	""	"104.3"	""	"129.2"	"136.0"	""	"617"	"39"	"34.000"	"27.000"	"0.00382168746944619"	"22"	"0.0001686"	"0.001154"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDTAAK"	"[R].dIDTAAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q71S46"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1"	"Q71S46; Q06645; Q06646"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1; ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"596.35242"	"1191.69756"	"1191.69852"	"-0.81"	"-0.00048"	"12/54"	"12"	"54"	"12522864.1444702"	"HCD"	"MS2"	"0"	"945.0"	"100.000"	"39.5121"	"11100"	"11100"	"11092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1129.5"	""	"981.4"	""	"1061.1"	""	"1826.2"	""	"1915.9"	"2064.6"	""	"617"	"40"	"34.000"	"27.000"	"0.00302172660498583"	""	"0.001488"	"0.01199"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDTAAK"	"[R].dIDTAAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q71S46"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1"	"Q71S46; Q06645; Q06646"	"ATP synthase F(0) complex subunit C3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc3 PE=2 SV=1; ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1; ATP synthase F(0) complex subunit C2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc2 PE=2 SV=1"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"596.35248"	"1191.69768"	"1191.69852"	"-0.71"	"-0.00042"	"6/54"	"6"	"54"	"13347823.6634521"	"HCD"	"MS2"	"0"	"1013.5"	"100.000"	"39.5665"	"11087"	"11087"	"11079"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1255.5"	""	"1039.4"	""	"1114.5"	""	"1927.1"	""	"2095.3"	"2207.6"	""	"617"	"37"	"34.000"	"27.000"	"0.00625540118972315"	""	"0.001615"	"0.01452"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELSEGK"	"[R].aELSEGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"596.35309"	"1191.69890"	"1191.69852"	"0.32"	"0.00019"	"10/54"	"10"	"54"	"3912370.60253906"	"HCD"	"MS2"	"5.518296"	"285.6"	"100.000"	"38.4020"	"10614"	"10614"	"10594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.2"	""	"310.9"	""	"352.5"	""	"529.7"	""	"575.6"	"630.9"	""	"616"	"28"	"34.000"	"27.000"	"0.0498368651594064"	""	"0.002189"	"0.02092"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELSEGK"	"[R].aELSEGk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"596.35309"	"1191.69890"	"1191.69852"	"0.32"	"0.00019"	"10/54"	"10"	"54"	"6841076.61138916"	"HCD"	"MS2"	"1.99635"	"488.2"	"100.000"	"38.2383"	"10583"	"10583"	"10565"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"585.8"	""	"521.3"	""	"558.9"	""	"888.3"	""	"987.3"	"1103.3"	""	"616"	"27"	"34.000"	"27.000"	"0.0658492323566687"	""	"0.002755"	"0.02909"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVMVAK"	"[KR].eGVMVAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P63326; P30427"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1;Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P63326; P30427"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1; Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"596.36133"	"1191.71538"	"1191.71715"	"-1.49"	"-0.00089"	"6/48"	"6"	"48"	"3134644.58911133"	"HCD"	"MS2"	"0"	"243.9"	"100.000"	"48.8949"	"14904"	"14904"	"14890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"387.1"	""	"400.9"	""	"383.4"	""	"299.3"	"0.6"	"454.3"	"381.9"	""	"493"	"25"	"33.000"	"26.000"	"0.0696332913816723"	"21"	"0.002588"	"0.02704"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVMVAK"	"[KR].eGVMVAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P63326; P30427"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1;Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P63326; P30427"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1; Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"596.36157"	"1191.71587"	"1191.71715"	"-1.08"	"-0.00064"	"6/48"	"6"	"48"	"3188831.87481689"	"HCD"	"MS2"	"7.355235"	"231.4"	"100.000"	"49.1171"	"14960"	"14960"	"14937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.9"	""	"395.3"	""	"392.5"	""	"274.1"	"2.5"	"404.3"	"351.5"	""	"492"	"24"	"33.000"	"26.000"	"0.0950462763553011"	"20"	"0.00307"	"0.0339"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDSVAK"	"[K].tLDSVAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"596.37097"	"1191.73467"	"1191.73491"	"-0.20"	"-0.00012"	"6/54"	"6"	"54"	"3863085.05133057"	"HCD"	"MS2"	"16.60628"	"307.0"	"100.000"	"47.8694"	"14491"	"14491"	"14474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.8"	""	"284.5"	""	"208.8"	""	"571.9"	"0.5"	"720.3"	"902.7"	""	"314"	"36"	"31.000"	"24.000"	"0.00362159308629051"	""	"0.0001991"	"0.004943"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLDSVAK"	"[K].tLDSVAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.4054"	"0.0000"	"1"	"1"	"1"	"596.37134"	"1191.73540"	"1191.73491"	"0.41"	"0.00024"	"6/54"	"6"	"54"	"3567141.01989746"	"HCD"	"MS2"	"21.51396"	"270.5"	"100.000"	"48.1711"	"14575"	"14575"	"14557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.0"	""	"236.6"	""	"195.0"	""	"499.3"	""	"649.4"	"788.4"	""	"313"	"37"	"31.000"	"24.000"	"0.00348750100860802"	""	"0.001316"	"0.01041"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDTGEPMGR"	"[R].tDTGEPMGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"596.79480"	"1192.58232"	"1192.58295"	"-0.53"	"-0.00031"	"7/72"	"7"	"72"	"719791.942199707"	"HCD"	"MS2"	"0"	"46.2"	"100.000"	"25.9425"	"5610"	"5610"	"5587"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.7"	""	"58.8"	""	"75.7"	""	"62.4"	"2.0"	"81.0"	"82.2"	""	"398"	"35"	"32.000"	"25.000"	"0.00596833341278544"	""	"9.9E-05"	"0.0007627"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDTGEPMGR"	"[R].tDTGEPMGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"596.79535"	"1192.58342"	"1192.58295"	"0.39"	"0.00023"	"6/72"	"6"	"72"	"729240.868652344"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"25.7933"	"5589"	"5589"	"5562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.7"	""	"58.9"	""	"65.2"	""	"69.8"	"0.5"	"81.8"	"79.1"	""	"406"	"35"	"33.000"	"26.000"	"0.00715312868216249"	""	"9.9E-05"	"0.0007463"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"596.83112"	"1192.65495"	"1192.65572"	"-0.64"	"-0.00038"	"7/72"	"7"	"72"	"9710538.44372559"	"HCD"	"MS2"	"2.94799"	"394.0"	"100.000"	"44.5129"	"13128"	"13128"	"13121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"554.5"	""	"473.5"	""	"467.3"	""	"531.6"	""	"864.9"	"856.4"	""	"707"	"39"	"35.000"	"28.000"	"0.00401226323340163"	"17"	"9.9E-05"	"0.0006209"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"596.83118"	"1192.65508"	"1192.65572"	"-0.54"	"-0.00032"	"7/72"	"7"	"72"	"2339636.41314697"	"HCD"	"MS2"	"0"	"130.1"	"100.000"	"44.7974"	"13243"	"13243"	"13226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.4"	""	"151.3"	""	"164.4"	""	"180.9"	"0.8"	"287.1"	"278.5"	""	"706"	"39"	"35.000"	"28.000"	"0.00441341437666855"	"17"	"0"	"0.0002498"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"596.83124"	"1192.65520"	"1192.65572"	"-0.44"	"-0.00026"	"7/72"	"7"	"72"	"5645098.46838379"	"HCD"	"MS2"	"0"	"256.5"	"100.000"	"44.9090"	"13255"	"13255"	"13240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"343.9"	""	"329.0"	""	"312.4"	""	"342.7"	""	"571.1"	"541.3"	""	"706"	"39"	"35.000"	"28.000"	"0.004052982283884"	"17"	"9.9E-05"	"0.0005776"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLMTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.83179"	"1192.65630"	"1192.65572"	"0.48"	"0.00029"	"7/72"	"7"	"72"	"5913717.53619385"	"HCD"	"MS2"	"11.70757"	"264.7"	"100.000"	"44.6157"	"13136"	"13136"	"13121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"361.9"	""	"328.6"	""	"322.4"	""	"352.3"	""	"581.3"	"572.5"	""	"699"	"39"	"35.000"	"28.000"	"0.00431963627988856"	"15"	"0"	"0.0001999"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].yNLGLDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"596.84790"	"1192.68852"	"1192.68874"	"-0.18"	"-0.00011"	"5/68"	"5"	"68"	"854178.047302246"	"HCD"	"MS2"	"14.43428"	"48.3"	"100.000"	"94.6358"	"33426"	"33426"	"33413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.7"	""	"62.1"	""	"64.0"	""	"82.6"	"2.1"	"85.7"	"90.3"	""	"625"	"36"	"34.000"	"27.000"	"0.00831476581187129"	"23"	"0.001261"	"0.009583"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].yNLGLDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"596.84790"	"1192.68852"	"1192.68874"	"-0.18"	"-0.00011"	"7/68"	"7"	"68"	"1093709.27526855"	"HCD"	"MS2"	"44.34592"	"63.3"	"100.000"	"94.3593"	"33315"	"33315"	"33294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.1"	""	"114.9"	""	"80.0"	""	"99.5"	""	"91.2"	"103.0"	""	"625"	"26"	"34.000"	"27.000"	"0.0837240101505948"	"18"	"0.001103"	"0.00897"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].yNLGLDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"596.84808"	"1192.68889"	"1192.68874"	"0.13"	"0.00008"	"6/68"	"6"	"68"	"875685.854553223"	"HCD"	"MS2"	"19.13107"	"48.4"	"100.000"	"94.6734"	"33407"	"33407"	"33393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.0"	""	"55.4"	""	"70.8"	""	"73.2"	""	"88.8"	"101.0"	""	"633"	"30"	"35.000"	"28.000"	"0.0289316840925334"	"20"	"0.0007633"	"0.007343"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNLGLDLR"	"[K].yNLGLDLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"596.84814"	"1192.68901"	"1192.68874"	"0.23"	"0.00014"	"6/68"	"6"	"68"	"1197081.74291992"	"HCD"	"MS2"	"49.90551"	"71.4"	"100.000"	"94.3967"	"33295"	"33295"	"33271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.4"	""	"111.8"	""	"102.4"	""	"105.7"	""	"107.2"	"126.1"	""	"633"	"31"	"35.000"	"28.000"	"0.0224581363560413"	"17"	"0.000264"	"0.006113"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"597.33307"	"1193.65886"	"1193.66003"	"-0.98"	"-0.00058"	"6/54"	"6"	"54"	"1374993.91687012"	"HCD"	"MS2"	"31.00041"	"127.4"	"100.000"	"35.2912"	"9353"	"9353"	"9338"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.6"	""	"160.8"	""	"173.9"	""	"174.4"	""	"237.1"	"269.6"	""	"687"	"24"	"35.000"	"28.000"	"0.139613283568251"	"20"	"0.00212"	"0.01906"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"597.33313"	"1193.65898"	"1193.66003"	"-0.88"	"-0.00052"	"6/54"	"6"	"54"	"11180606.2278442"	"HCD"	"MS2"	"0"	"749.9"	"92.311"	"35.0091"	"9239"	"9239"	"9225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1360.3"	""	"1080.2"	""	"1212.2"	""	"691.1"	""	"1361.6"	"1397.2"	""	"687"	"27"	"35.000"	"28.000"	"0.0613658481961679"	"21"	"0.004213"	"0.0472"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"597.33331"	"1193.65935"	"1193.66003"	"-0.57"	"-0.00034"	"6/54"	"6"	"54"	"10806474.8287354"	"HCD"	"MS2"	"0"	"838.8"	"100.000"	"34.8830"	"9227"	"9227"	"9210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1476.5"	""	"1226.8"	""	"1345.4"	""	"805.4"	""	"1549.9"	"1550.0"	""	"688"	"27"	"35.000"	"28.000"	"0.0634685304197738"	"21"	"0.004792"	"0.05649"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"597.33337"	"1193.65947"	"1193.66003"	"-0.47"	"-0.00028"	"6/54"	"6"	"54"	"14418404.2579346"	"HCD"	"MS2"	"0"	"1079.2"	"100.000"	"34.7248"	"9126"	"9126"	"9108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2099.9"	""	"1706.2"	""	"1694.9"	""	"1042.7"	""	"1890.2"	"1771.2"	""	"688"	"26"	"35.000"	"28.000"	"0.0917399380595389"	"20"	"0.003904"	"0.04268"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"597.33350"	"1193.65972"	"1193.66003"	"-0.26"	"-0.00016"	"6/54"	"6"	"54"	"1294167.6807251"	"HCD"	"MS2"	"30.95345"	"109.5"	"100.000"	"35.2429"	"9371"	"9371"	"9349"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.5"	""	"156.6"	""	"160.1"	""	"141.4"	""	"200.2"	"216.9"	""	"694"	"21"	"35.000"	"28.000"	"0.298077691962372"	"18"	"0.002525"	"0.02401"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEMGK"	"[K].eAAEMGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630; P62632"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1; Elongation factor 1-alpha 2 OS=Rattus norvegicus OX=10116 GN=Eef1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"597.33362"	"1193.65996"	"1193.66003"	"-0.06"	"-0.00004"	"6/54"	"6"	"54"	"12131696.1935425"	"HCD"	"MS2"	"0"	"934.1"	"100.000"	"34.5919"	"9108"	"9108"	"9091"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1867.3"	""	"1472.7"	""	"1412.1"	""	"903.0"	""	"1632.3"	"1543.3"	""	"694"	"27"	"35.000"	"28.000"	"0.075392730906572"	"21"	"0.003357"	"0.03777"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"597.33966"	"1193.67204"	"1193.67275"	"-0.59"	"-0.00035"	"5/62"	"5"	"62"	"1392731.78717041"	"HCD"	"MS2"	"24.40726"	"101.7"	"100.000"	"44.4414"	"13066"	"13066"	"13041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.1"	""	"126.7"	""	"123.2"	""	"162.3"	""	"194.7"	"225.4"	""	"635"	"23"	"35.000"	"28.000"	"0.16586079000722"	"24"	"0.00307"	"0.03428"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"597.34045"	"1193.67363"	"1193.67275"	"0.74"	"0.00044"	"4/62"	"4"	"62"	"1409906.35650635"	"HCD"	"MS2"	"0"	"98.0"	"100.000"	"44.2516"	"13024"	"13024"	"13001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.5"	""	"132.1"	""	"115.2"	""	"164.6"	""	"195.3"	"197.2"	""	"644"	"18"	"35.000"	"28.000"	"0.529487694875208"	"24"	"0.003357"	"0.03777"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"597.34070"	"1193.67412"	"1193.67275"	"1.14"	"0.00068"	"6/62"	"6"	"62"	"3297759.86621094"	"HCD"	"MS2"	"0"	"152.8"	"100.000"	"56.2547"	"17859"	"17859"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"142.8"	""	"80.9"	""	"182.0"	""	"259.2"	""	"370.0"	"424.5"	""	"676"	"15"	"35.000"	"28.000"	"1.14793342135558"	"18"	"0.007522"	"0.09605"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"597.34088"	"1193.67449"	"1193.67275"	"1.45"	"0.00087"	"7/62"	"7"	"62"	"5830965.72662354"	"HCD"	"MS2"	"5.608846"	"306.0"	"100.000"	"44.1201"	"12934"	"12934"	"12913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"380.7"	""	"394.7"	""	"368.8"	""	"501.2"	"0.1"	"636.3"	"624.0"	""	"676"	"24"	"35.000"	"28.000"	"0.149939721648824"	"25"	"0.001217"	"0.009382"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTTPYVR"	"[K].eVTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"597.34094"	"1193.67461"	"1193.67275"	"1.55"	"0.00093"	"7/62"	"7"	"62"	"6257381.33526611"	"HCD"	"MS2"	"5.625802"	"323.1"	"100.000"	"43.9438"	"12898"	"12898"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"380.6"	""	"432.2"	""	"388.2"	""	"516.1"	""	"671.9"	"685.1"	""	"676"	"24"	"35.000"	"28.000"	"0.149939721648824"	"27"	"0.001453"	"0.01157"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQSVQLPR"	"[K].hQSVQLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"398.56958"	"1193.69419"	"1193.69522"	"-0.87"	"-0.00034"	"7/68"	"7"	"68"	"9693621.44152832"	"HCD"	"MS2"	"39.45536"	"175.5"	"66.707"	"25.9175"	"5639"	"5639"	"5621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.0"	""	"221.1"	""	"243.2"	""	"237.2"	""	"373.2"	"359.3"	""	"515"	"46"	"34.000"	"27.000"	"0.000587188083540107"	"15"	"9.9E-05"	"0.001003"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQSVQLPR"	"[K].hQSVQLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"597.35101"	"1193.69475"	"1193.69522"	"-0.39"	"-0.00024"	"7/68"	"7"	"68"	"605761.105102539"	"HCD"	"MS2"	"43.00858"	"45.5"	"100.000"	"25.9400"	"5649"	"5649"	"5621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.6"	""	"56.7"	""	"60.5"	""	"88.4"	"1.6"	"90.0"	"73.8"	""	"515"	"19"	"34.000"	"27.000"	"0.309583091913984"	"15"	"0.002286"	"0.02186"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQSVQLPR"	"[K].hQSVQLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"398.56979"	"1193.69483"	"1193.69522"	"-0.33"	"-0.00013"	"7/68"	"7"	"68"	"9492280.80340576"	"HCD"	"MS2"	"31.541"	"223.4"	"90.763"	"26.0617"	"5658"	"5658"	"5642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.7"	""	"271.3"	""	"299.8"	""	"350.8"	""	"458.2"	"453.4"	""	"515"	"51"	"34.000"	"27.000"	"0.000201269159681495"	"20"	"9.9E-05"	"0.0004955"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQSVQLPR"	"[K].hQSVQLPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"597.35156"	"1193.69585"	"1193.69522"	"0.53"	"0.00031"	"7/68"	"7"	"68"	"543388.115783691"	"HCD"	"MS2"	"38.2868"	"40.8"	"100.000"	"26.1053"	"5676"	"5676"	"5655"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"56.8"	""	"52.8"	""	"85.7"	""	"71.3"	"75.1"	""	"510"	"28"	"34.000"	"27.000"	"0.039132733061382"	"17"	"0.0005161"	"0.00669"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGMTIAK"	"[K].dGMTIAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"597.35181"	"1193.69634"	"1193.69642"	"-0.07"	"-0.00004"	"6/54"	"6"	"54"	"3273829.83276367"	"HCD"	"MS2"	"22.16096"	"237.7"	"100.000"	"50.6931"	"15636"	"15636"	"15619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"392.1"	""	"351.0"	""	"340.0"	""	"285.6"	""	"412.2"	"471.2"	""	"508"	"27"	"34.000"	"27.000"	"0.0499843117585539"	"26"	"0.002166"	"0.01991"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGMTIAK"	"[K].dGMTIAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"597.35181"	"1193.69634"	"1193.69642"	"-0.07"	"-0.00004"	"6/54"	"6"	"54"	"11252121.645874"	"HCD"	"MS2"	"7.956346"	"627.4"	"81.632"	"50.9740"	"15751"	"15751"	"15734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"937.2"	""	"864.2"	""	"942.1"	""	"708.5"	""	"1142.4"	"1354.9"	""	"508"	"26"	"34.000"	"27.000"	"0.0569946008640823"	""	"0.002799"	"0.02972"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGMTIAK"	"[K].dGMTIAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"597.35199"	"1193.69670"	"1193.69642"	"0.24"	"0.00014"	"6/54"	"6"	"54"	"5406221.97253418"	"HCD"	"MS2"	"5.977155"	"407.2"	"100.000"	"51.0555"	"15750"	"15750"	"15732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"673.7"	""	"594.9"	""	"597.4"	""	"476.9"	""	"708.7"	"807.7"	""	"503"	"27"	"34.000"	"27.000"	"0.0458709769133389"	"27"	"0.002711"	"0.02884"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGMTIAK"	"[K].dGMTIAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"597.35358"	"1193.69988"	"1193.69642"	"2.90"	"0.00173"	"6/54"	"6"	"54"	"6255366.52728271"	"HCD"	"MS2"	"17.35544"	"418.3"	"100.000"	"51.3633"	"15872"	"15872"	"15853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"610.7"	""	"562.2"	""	"621.3"	""	"494.0"	"5.7"	"762.3"	"909.3"	""	"497"	"18"	"33.000"	"26.000"	"0.388442189196277"	"24"	"0.00511"	"0.06491"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"398.58066"	"1193.72742"	"1193.72943"	"-1.68"	"-0.00067"	"7/48"	"7"	"48"	"583577.014282227"	"HCD"	"MS2"	"25.63716"	"33.4"	"100.000"	"64.8810"	"21361"	"21361"	"21339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"48.3"	""	"52.2"	""	"49.5"	""	"55.9"	"63.0"	""	"289"	"11"	"31.000"	"24.000"	"1.03960377321535"	"20"	"0.004234"	"0.04825"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"398.58078"	"1193.72779"	"1193.72943"	"-1.38"	"-0.00055"	"5/48"	"5"	"48"	"973586.974975586"	"HCD"	"MS2"	"5.217592"	"48.4"	"100.000"	"65.1743"	"21514"	"21514"	"21492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.8"	""	"58.6"	""	"75.7"	""	"74.3"	""	"87.6"	"93.3"	""	"289"	"21"	"31.000"	"24.000"	"0.107119329867983"	""	"0.004073"	"0.04406"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"597.36780"	"1193.72832"	"1193.72943"	"-0.93"	"-0.00056"	"6/48"	"6"	"48"	"21530392.7774658"	"HCD"	"MS2"	"1.14478"	"1185.5"	"75.510"	"64.8904"	"21365"	"21365"	"21348"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1934.4"	""	"1743.3"	""	"1638.4"	""	"1927.9"	""	"1894.2"	"2082.4"	""	"289"	"37"	"31.000"	"24.000"	"0.00266604728071434"	""	"0.002462"	"0.02298"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.4583"	"0.0000"	"1"	"1"	"1"	"398.58105"	"1193.72861"	"1193.72943"	"-0.69"	"-0.00027"	"4/48"	"4"	"48"	"890116.898193359"	"HCD"	"MS2"	"4.953118"	"50.4"	"100.000"	"65.2057"	"21493"	"21493"	"21473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.7"	""	"67.6"	""	"71.1"	""	"71.8"	""	"88.4"	"100.4"	""	"289"	"24"	"31.000"	"24.000"	"0.0583267592838189"	""	"0.001453"	"0.01176"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"398.58124"	"1193.72916"	"1193.72943"	"-0.23"	"-0.00009"	"4/48"	"4"	"48"	"733403.752563477"	"HCD"	"MS2"	"35.65975"	"40.5"	"100.000"	"64.8569"	"21385"	"21385"	"21362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.6"	""	"54.5"	""	"56.0"	""	"61.0"	"0.2"	"76.0"	"67.3"	""	"295"	"17"	"31.000"	"24.000"	"0.288929589342134"	"22"	"0.007443"	"0.09518"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"597.36835"	"1193.72942"	"1193.72943"	"-0.01"	"-0.00001"	"6/48"	"6"	"48"	"24202651.3922729"	"HCD"	"MS2"	"0.1422453"	"1208.6"	"73.234"	"64.9054"	"21405"	"21405"	"21388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1989.5"	""	"1793.2"	""	"1680.9"	""	"1921.8"	"1.6"	"1915.2"	"2125.6"	""	"295"	"34"	"31.000"	"24.000"	"0.00526977436274095"	""	"0.001596"	"0.01308"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"597.36847"	"1193.72966"	"1193.72943"	"0.19"	"0.00012"	"6/48"	"6"	"48"	"24506578.5465088"	"HCD"	"MS2"	"0.1966108"	"733.4"	"41.520"	"65.1964"	"21490"	"21490"	"21473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1090.6"	""	"1045.4"	""	"1035.4"	""	"1101.2"	""	"1268.3"	"1413.7"	""	"295"	"38"	"31.000"	"24.000"	"0.00262296212980741"	""	"0.002373"	"0.02247"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"597.36926"	"1193.73125"	"1193.72943"	"1.52"	"0.00091"	"6/48"	"6"	"48"	"2107322.28588867"	"HCD"	"MS2"	"5.756577"	"157.2"	"100.000"	"65.5152"	"21653"	"21653"	"21632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.7"	""	"201.7"	""	"228.4"	""	"237.6"	""	"295.7"	"302.1"	""	"289"	"37"	"31.000"	"24.000"	"0.00309647691861849"	""	"0.0001991"	"0.005844"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"597.36938"	"1193.73149"	"1193.72943"	"1.73"	"0.00103"	"6/48"	"6"	"48"	"2310539.01544189"	"HCD"	"MS2"	"7.016077"	"176.8"	"100.000"	"65.5116"	"21618"	"21618"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"267.6"	""	"236.1"	""	"250.2"	""	"283.7"	""	"292.7"	"346.6"	""	"287"	"37"	"31.000"	"24.000"	"0.00292315538150771"	""	"0.0001991"	"0.005463"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVAFVK"	"[GK].gDVAFVk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"597.36938"	"1193.73149"	"1193.72943"	"1.73"	"0.00103"	"6/48"	"6"	"48"	"22227357.4069824"	"HCD"	"MS2"	"0.3041525"	"878.3"	"56.798"	"65.1905"	"21521"	"21521"	"21505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1379.4"	""	"1214.2"	""	"1215.1"	""	"1324.7"	""	"1504.8"	"1687.6"	""	"287"	"38"	"31.000"	"24.000"	"0.00250525478944092"	""	"0.002525"	"0.02406"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTHNMYR"	"[R].sGTHNMYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"398.86774"	"1194.58866"	"1194.58871"	"-0.04"	"-0.00002"	"9/66"	"9"	"66"	"1745791.35040283"	"HCD"	"MS2"	"59.12931"	"103.5"	"100.000"	"19.1790"	"3015"	"3015"	"3006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.1"	""	"113.6"	""	"119.2"	""	"237.1"	"1.6"	"205.9"	"188.0"	""	"432"	"15"	"33.000"	"26.000"	"0.653813300469882"	"13"	"0.004852"	"0.05977"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDHYIR"	"[K].dFDHYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"398.87430"	"1194.60834"	"1194.61049"	"-1.80"	"-0.00072"	"5/52"	"5"	"52"	"956064.866210938"	"HCD"	"MS2"	"5.350579"	"36.2"	"100.000"	"49.0508"	"14968"	"14968"	"14943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"41.8"	""	"50.8"	""	"59.1"	""	"69.9"	"66.7"	""	"586"	"27"	"34.000"	"27.000"	"0.0633676527452017"	"20"	"0.0005161"	"0.00658"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDHYIR"	"[K].dFDHYIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"Q08415"	"Kynurenine--oxoglutarate transaminase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Kyat1 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"398.87436"	"1194.60852"	"1194.61049"	"-1.64"	"-0.00065"	"7/52"	"7"	"52"	"768144.901916504"	"HCD"	"MS2"	"15.80661"	"29.6"	"100.000"	"49.3559"	"15057"	"15057"	"15036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.8"	""	"35.2"	""	"41.3"	""	"46.5"	"0.3"	"50.2"	"66.1"	""	"586"	"12"	"34.000"	"27.000"	"1.66290569384704"	"22"	"0.006997"	"0.08865"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVNLMDR"	"[R].sMVNLMDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"597.81201"	"1194.61675"	"1194.61723"	"-0.40"	"-0.00024"	"5/76"	"5"	"76"	"666940.309204102"	"HCD"	"MS2"	"17.54723"	"49.5"	"100.000"	"67.6293"	"22476"	"22476"	"22453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.0"	""	"65.6"	""	"69.7"	""	"73.0"	""	"96.3"	"103.4"	""	"648"	"21"	"35.000"	"28.000"	"0.246345713728619"	"23"	"0.003317"	"0.03586"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVNLMDR"	"[R].sMVNLMDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"597.81238"	"1194.61748"	"1194.61723"	"0.21"	"0.00012"	"6/76"	"6"	"76"	"561138.405578613"	"HCD"	"MS2"	"14.62831"	"42.6"	"100.000"	"67.6120"	"22500"	"22500"	"22483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.9"	""	"57.7"	""	"57.5"	""	"66.3"	""	"81.9"	"77.3"	""	"648"	"32"	"35.000"	"28.000"	"0.0185159078281685"	"21"	"0.0001991"	"0.003295"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"597.81866"	"1194.63005"	"1194.63162"	"-1.31"	"-0.00078"	"8/76"	"8"	"76"	"13779399.414917"	"HCD"	"MS2"	"8.63377"	"609.0"	"100.000"	"39.7247"	"11150"	"11150"	"11136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"977.2"	""	"741.1"	""	"854.3"	""	"1060.6"	""	"1014.2"	"1117.7"	""	"645"	"38"	"35.000"	"28.000"	"0.00546423940644264"	"26"	"9.9E-05"	"0.0008406"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"597.81891"	"1194.63054"	"1194.63162"	"-0.90"	"-0.00054"	"8/76"	"8"	"76"	"13890424.1873779"	"HCD"	"MS2"	"6.565059"	"661.2"	"100.000"	"39.6471"	"11153"	"11153"	"11141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1058.9"	""	"798.6"	""	"918.6"	""	"1160.6"	""	"1119.8"	"1210.9"	""	"641"	"34"	"35.000"	"28.000"	"0.014022583470322"	"26"	"0.0001686"	"0.001263"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"597.81897"	"1194.63066"	"1194.63162"	"-0.80"	"-0.00048"	"8/76"	"8"	"76"	"11965446.3875122"	"HCD"	"MS2"	"2.173632"	"410.0"	"78.312"	"40.0321"	"11274"	"11274"	"11257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"681.1"	""	"495.5"	""	"589.9"	""	"710.7"	""	"664.1"	"738.9"	""	"641"	"38"	"35.000"	"28.000"	"0.0053312375444364"	"27"	"9.9E-05"	"0.0008957"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"597.81921"	"1194.63115"	"1194.63162"	"-0.39"	"-0.00023"	"8/76"	"8"	"76"	"12465103.1695557"	"HCD"	"MS2"	"2.104652"	"498.3"	"91.328"	"39.9339"	"11268"	"11268"	"11254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"811.4"	""	"596.7"	""	"716.2"	""	"879.6"	""	"796.0"	"915.6"	""	"641"	"39"	"35.000"	"28.000"	"0.00402557603364208"	"27"	"9.9E-05"	"0.0007631"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"597.81927"	"1194.63127"	"1194.63162"	"-0.29"	"-0.00017"	"6/76"	"6"	"76"	"1696703.35369873"	"HCD"	"MS2"	"15.93327"	"110.9"	"100.000"	"40.2397"	"11393"	"11393"	"11370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.4"	""	"127.6"	""	"139.4"	""	"170.6"	""	"216.7"	"254.3"	""	"646"	"22"	"35.000"	"28.000"	"0.204739916735987"	"21"	"0.0001991"	"0.004794"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPLSGSYR"	"[K].eGPLSGSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"597.81927"	"1194.63127"	"1194.63162"	"-0.29"	"-0.00017"	"6/76"	"6"	"76"	"1691928.07104492"	"HCD"	"MS2"	"12.3261"	"109.6"	"100.000"	"40.3242"	"11393"	"11393"	"11373"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.8"	""	"118.3"	""	"138.9"	""	"197.0"	""	"201.6"	"242.9"	""	"646"	"24"	"35.000"	"28.000"	"0.117274211690743"	"23"	"0.0005161"	"0.006684"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTFINLR"	"[R].sDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"597.83728"	"1194.66728"	"1194.66800"	"-0.60"	"-0.00036"	"6/64"	"6"	"64"	"5082351.69012451"	"HCD"	"MS2"	"0.6625928"	"237.5"	"100.000"	"74.4003"	"25225"	"25225"	"25208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"340.1"	""	"309.2"	""	"354.0"	""	"365.6"	""	"427.6"	"455.3"	""	"515"	"33"	"34.000"	"27.000"	"0.0129651406762886"	"21"	"0.001348"	"0.01058"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTFINLR"	"[R].sDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"597.83740"	"1194.66753"	"1194.66800"	"-0.40"	"-0.00024"	"7/64"	"7"	"64"	"11122918.8707886"	"HCD"	"MS2"	"0"	"409.6"	"89.716"	"74.2311"	"25186"	"25186"	"25174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"592.6"	""	"567.9"	""	"592.4"	""	"630.5"	""	"721.4"	"779.9"	""	"515"	"33"	"34.000"	"27.000"	"0.0119888419082162"	"21"	"0.001348"	"0.01061"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTFINLR"	"[R].sDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"597.83746"	"1194.66765"	"1194.66800"	"-0.30"	"-0.00018"	"6/64"	"6"	"64"	"4457638.35473633"	"HCD"	"MS2"	"2.745227"	"207.8"	"100.000"	"74.5213"	"25304"	"25304"	"25290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"298.5"	""	"277.1"	""	"297.9"	""	"316.6"	""	"378.0"	"402.0"	""	"516"	"33"	"34.000"	"27.000"	"0.0131710289993655"	"19"	"0.0005778"	"0.007169"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTFINLR"	"[R].sDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"597.83759"	"1194.66789"	"1194.66800"	"-0.09"	"-0.00005"	"6/64"	"6"	"64"	"1218872.80639648"	"HCD"	"MS2"	"16.03603"	"69.8"	"100.000"	"73.8127"	"24986"	"24986"	"24961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.1"	""	"100.9"	""	"94.1"	""	"117.3"	""	"131.1"	"125.9"	""	"528"	"22"	"34.000"	"27.000"	"0.180137415253401"	"19"	"0.0009352"	"0.007859"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTFINLR"	"[R].sDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"597.83759"	"1194.66789"	"1194.66800"	"-0.09"	"-0.00005"	"6/64"	"6"	"64"	"9782913.55700684"	"HCD"	"MS2"	"0"	"422.0"	"100.000"	"74.1193"	"25111"	"25111"	"25097"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"606.8"	""	"601.1"	""	"584.1"	""	"653.5"	""	"775.9"	"778.4"	""	"528"	"34"	"34.000"	"27.000"	"0.00958526064593068"	"22"	"0.001162"	"0.009214"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTFINLR"	"[R].sDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"597.83795"	"1194.66863"	"1194.66800"	"0.52"	"0.00031"	"7/64"	"7"	"64"	"2054613.82275391"	"HCD"	"MS2"	"7.743158"	"110.1"	"100.000"	"73.9455"	"25069"	"25069"	"25051"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.9"	""	"156.7"	""	"154.5"	""	"165.3"	""	"197.8"	"212.8"	""	"526"	"32"	"34.000"	"27.000"	"0.0184058444948598"	"22"	"0.0001991"	"0.00508"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVVFAVK"	"[-].mNVVFAVk.[Q]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"597.84088"	"1194.67449"	"1194.67540"	"-0.76"	"-0.00046"	"7/70"	"7"	"70"	"183823.090637207"	"HCD"	"MS2"	"37.39899"	"9.6"	"100.000"	"104.1075"	"37241"	"37241"	"37217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"12.1"	""	"13.4"	""	"21.4"	""	"14.0"	"18.8"	""	"587"	"43"	"34.000"	"27.000"	"0.00154386067685672"	"23"	"0.0001991"	"0.003089"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGTVQK"	"[K].gmGTVQk.[G]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"597.84869"	"1194.69011"	"1194.69166"	"-1.30"	"-0.00078"	"6/50"	"6"	"50"	"4116714.25769043"	"HCD"	"MS2"	"13.56891"	"250.7"	"100.000"	"25.5526"	"5451"	"5451"	"5438"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.2"	""	"316.4"	""	"324.5"	""	"555.6"	""	"460.4"	"433.7"	""	"552"	"20"	"34.000"	"27.000"	"0.268478233762442"	"21"	"0.004751"	"0.05611"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQTMAK"	"[R].aSQTMAk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"597.84888"	"1194.69048"	"1194.69166"	"-0.99"	"-0.00059"	"6/60"	"6"	"60"	"679275.166381836"	"HCD"	"MS2"	"0"	"60.7"	"100.000"	"29.0068"	"6861"	"6861"	"6841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.9"	""	"81.9"	""	"78.5"	""	"76.7"	""	"120.6"	"141.0"	""	"543"	"24"	"34.000"	"27.000"	"0.115284211611424"	"19"	"0.001488"	"0.01198"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGTVQK"	"[K].gmGTVQk.[G]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"597.84979"	"1194.69231"	"1194.69166"	"0.54"	"0.00032"	"6/50"	"6"	"50"	"3796696.91278076"	"HCD"	"MS2"	"27.80246"	"237.3"	"100.000"	"25.3641"	"5414"	"5414"	"5395"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"273.1"	""	"283.7"	""	"330.2"	""	"525.0"	""	"448.8"	"390.9"	""	"473"	"18"	"33.000"	"26.000"	"0.384442280734989"	"22"	"0.007069"	"0.08943"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"598.32904"	"1195.65080"	"1195.65202"	"-1.02"	"-0.00061"	"6/64"	"6"	"64"	"2574068.7255249"	"HCD"	"MS2"	"0"	"136.6"	"100.000"	"54.5670"	"17211"	"17211"	"17188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.6"	""	"160.1"	""	"180.1"	""	"226.6"	""	"256.7"	"253.9"	""	"571"	"46"	"34.000"	"27.000"	"0.000730476270711562"	"27"	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"598.32910"	"1195.65093"	"1195.65202"	"-0.91"	"-0.00055"	"6/64"	"6"	"64"	"3271127.16436768"	"HCD"	"MS2"	"0"	"154.3"	"100.000"	"54.8700"	"17334"	"17334"	"17321"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"230.8"	""	"201.6"	""	"195.5"	""	"248.5"	""	"300.6"	"286.0"	""	"571"	"47"	"34.000"	"27.000"	"0.000620306186565599"	"26"	"0.0001991"	"0.00547"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"598.32910"	"1195.65093"	"1195.65202"	"-0.91"	"-0.00055"	"6/64"	"6"	"64"	"4008317.36560059"	"HCD"	"MS2"	"0"	"186.2"	"100.000"	"55.1990"	"17435"	"17435"	"17418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.2"	""	"221.1"	""	"248.5"	""	"302.9"	""	"360.0"	"345.8"	""	"571"	"50"	"34.000"	"27.000"	"0.000270150709569934"	"27"	"0.0001991"	"0.002543"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLYEAVR"	"[R].dTLYEAVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"598.32971"	"1195.65215"	"1195.65202"	"0.11"	"0.00006"	"6/64"	"6"	"64"	"2225074.95825195"	"HCD"	"MS2"	"0"	"117.9"	"100.000"	"54.9027"	"17314"	"17314"	"17287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.0"	""	"154.1"	""	"147.4"	""	"194.7"	""	"213.3"	"217.2"	""	"588"	"50"	"34.000"	"27.000"	"0.00029063460982914"	"27"	"0.0001686"	"0.00143"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].aMVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"598.33313"	"1195.65898"	"1195.65941"	"-0.36"	"-0.00021"	"5/58"	"5"	"58"	"235386.794677734"	"HCD"	"MS2"	"14.53616"	"11.4"	"100.000"	"114.7837"	"41453"	"41453"	"41439"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"18.4"	""	"13.6"	""	"16.4"	""	"21.1"	"25.5"	""	"598"	"27"	"34.000"	"27.000"	"0.0630479816830053"	""	"0.005997"	"0.07303"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].aMVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5918"	"0.0000"	"1"	"1"	"1"	"598.33313"	"1195.65898"	"1195.65941"	"-0.36"	"-0.00021"	"6/58"	"6"	"58"	"6306954.99102783"	"HCD"	"MS2"	"4.940125"	"253.0"	"100.000"	"114.4639"	"41327"	"41327"	"41310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"372.4"	""	"357.5"	""	"345.2"	""	"295.6"	""	"505.9"	"526.5"	""	"598"	"49"	"34.000"	"27.000"	"0.000357002443234818"	""	"0.0001991"	"0.003618"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].aMVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5849"	"0.0000"	"1"	"1"	"1"	"598.33331"	"1195.65935"	"1195.65941"	"-0.05"	"-0.00003"	"6/58"	"6"	"58"	"6761208.85705566"	"HCD"	"MS2"	"6.425142"	"276.6"	"100.000"	"114.3919"	"41285"	"41285"	"41268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"400.6"	""	"407.3"	""	"379.7"	""	"308.3"	""	"557.9"	"572.5"	""	"598"	"53"	"34.000"	"27.000"	"0.000160203200596489"	""	"0.0001686"	"0.001249"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"598.34113"	"1195.67497"	"1195.67568"	"-0.59"	"-0.00035"	"5/52"	"5"	"52"	"8410226.76312256"	"HCD"	"MS2"	"0"	"406.8"	"100.000"	"27.3245"	"6182"	"6182"	"6165"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"407.8"	""	"422.5"	""	"528.4"	""	"1153.1"	""	"674.7"	"669.1"	""	"500"	"20"	"33.000"	"26.000"	"0.236015219071481"	"22"	"0.008893"	"0.114"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADGTVK"	"[K].mADGTVk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"598.34186"	"1195.67644"	"1195.67568"	"0.63"	"0.00038"	"5/52"	"5"	"52"	"3396267.33221436"	"HCD"	"MS2"	"0"	"200.5"	"100.000"	"27.0402"	"6069"	"6069"	"6052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.1"	""	"231.1"	""	"262.1"	""	"504.4"	"1.5"	"336.6"	"328.3"	""	"447"	"20"	"33.000"	"26.000"	"0.206194713969089"	"22"	"0.0065"	"0.08077"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGGGNYK"	"[R].aAGGGNYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"598.34454"	"1195.68181"	"1195.68354"	"-1.45"	"-0.00087"	"12/62"	"12"	"62"	"2474815.98876953"	"HCD"	"MS2"	"0"	"207.6"	"100.000"	"27.6090"	"6297"	"6297"	"6284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"281.9"	""	"249.3"	""	"280.3"	""	"355.8"	""	"403.2"	"398.3"	""	"419"	"26"	"33.000"	"26.000"	"0.0583692384827937"	"17"	"0.0001991"	"0.003688"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGGGNYK"	"[R].aAGGGNYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"598.34521"	"1195.68315"	"1195.68354"	"-0.33"	"-0.00019"	"7/62"	"7"	"62"	"3468416.51800537"	"HCD"	"MS2"	"0"	"292.9"	"100.000"	"27.8167"	"6341"	"6341"	"6330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"441.7"	""	"380.4"	""	"412.6"	""	"492.7"	""	"513.3"	"537.9"	""	"419"	"24"	"33.000"	"26.000"	"0.0908205290221873"	"16"	"0.0001991"	"0.004803"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"HIADIIER"	"[K].hIADIIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYD6"	"Tetratricopeptide repeat protein 30B OS=Rattus norvegicus OX=10116 GN=Ttc30b PE=2 SV=1"	"B2RYD6"	"Tetratricopeptide repeat protein 30B OS=Rattus norvegicus OX=10116 GN=Ttc30b PE=2 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"399.23819"	"1195.70002"	"1195.69964"	"0.32"	"0.00013"	"6/62"	"6"	"62"	"941315.57232666"	"HCD"	"MS2"	"58.39228"	"34.9"	"100.000"	"48.4121"	"14674"	"14674"	"14647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.4"	""	"42.8"	""	"51.2"	""	"62.3"	""	"58.1"	"62.5"	""	"349"	"21"	"32.000"	"25.000"	"0.146823452217087"	"14"	"0.0001686"	"0.001502"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"HIANIIER"	"[].hIAnIIER.[]"	"N-Term(TMT6plex); N4(Deamidated)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"399.23819"	"1195.70002"	"1195.69964"	"0.32"	"0.00013"	"6/64"	"6"	"64"	"941315.57232666"	"HCD"	"MS2"	"58.39228"	"34.9"	"100.000"	"48.4121"	"14674"	"14674"	"14647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.4"	""	"42.8"	""	"51.2"	""	"62.3"	""	"58.1"	"62.5"	""	"349"	"21"	"32.000"	"25.000"	"0.146823452217087"	"14"	"0.0001686"	"0.001502"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMNTDLSR"	"[K].mMNTDLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"598.80286"	"1196.59844"	"1196.59649"	"1.62"	"0.00097"	"6/72"	"6"	"72"	"5616876.82806396"	"HCD"	"MS2"	"5.476107"	"311.0"	"100.000"	"45.9012"	"13694"	"13694"	"13669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"536.7"	""	"425.5"	""	"427.3"	""	"332.2"	""	"646.8"	"581.8"	""	"461"	"38"	"33.000"	"26.000"	"0.00392347536185036"	""	"0.0001991"	"0.002796"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMNTDLSR"	"[K].mMNTDLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"P50878"	"60S ribosomal protein L4 OS=Rattus norvegicus OX=10116 GN=Rpl4 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"598.80298"	"1196.59868"	"1196.59649"	"1.83"	"0.00109"	"6/72"	"6"	"72"	"5344859.38452148"	"HCD"	"MS2"	"6.494826"	"291.5"	"100.000"	"46.2014"	"13782"	"13782"	"13761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"481.8"	""	"394.7"	""	"396.9"	""	"345.6"	"2.0"	"603.0"	"539.6"	""	"461"	"39"	"33.000"	"26.000"	"0.00265870975927761"	""	"0.0001686"	"0.001579"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNHHALYR"	"[K].gNHHALYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"598.82758"	"1196.64787"	"1196.64861"	"-0.61"	"-0.00037"	"10/70"	"10"	"70"	"1267623.47369385"	"HCD"	"MS2"	"0"	"68.3"	"100.000"	"18.7638"	"2848"	"2848"	"2829"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.7"	""	"52.0"	""	"71.2"	""	"185.3"	"1.3"	"168.5"	"121.0"	""	"548"	"32"	"34.000"	"27.000"	"0.0156225010604925"	"26"	"0.0001991"	"0.002381"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNHHALYR"	"[K].gNHHALYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"598.82794"	"1196.64861"	"1196.64861"	"0.00"	"0.00000"	"10/70"	"10"	"70"	"3222398.82446289"	"HCD"	"MS2"	"0"	"154.3"	"100.000"	"18.7584"	"2806"	"2806"	"2791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.3"	""	"100.1"	""	"138.1"	""	"445.3"	"1.1"	"352.8"	"315.4"	""	"571"	"33"	"34.000"	"27.000"	"0.0147436873427177"	"23"	"0.0001991"	"0.004636"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLAQHIR"	"[R].eTLAQHIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"399.56924"	"1196.69318"	"1196.69489"	"-1.43"	"-0.00057"	"10/64"	"10"	"64"	"1299971.16491699"	"HCD"	"MS2"	"19.88969"	"69.2"	"100.000"	"29.1380"	"6914"	"6914"	"6889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"96.8"	""	"93.5"	""	"116.9"	"0.6"	"129.0"	"120.4"	""	"383"	"18"	"32.000"	"25.000"	"0.32973783210982"	"22"	"0.002286"	"0.02161"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLAQHIR"	"[R].eTLAQHIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"Q9QWE9"	"Glutathione hydrolase 5 proenzyme OS=Rattus norvegicus OX=10116 GN=Ggt5 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"399.56989"	"1196.69510"	"1196.69489"	"0.18"	"0.00007"	"5/64"	"5"	"64"	"1130576.43774414"	"HCD"	"MS2"	"40.95024"	"64.8"	"100.000"	"29.3429"	"6957"	"6957"	"6930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.0"	""	"92.9"	""	"92.7"	""	"96.0"	"1.3"	"127.6"	"116.8"	""	"373"	"15"	"32.000"	"25.000"	"0.652647736507887"	"13"	"0.001718"	"0.01506"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEFLQR"	"[R].fEEFLQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"599.32611"	"1197.64495"	"1197.64654"	"-1.33"	"-0.00080"	"5/52"	"5"	"52"	"436877.164672852"	"HCD"	"MS2"	"9.749935"	"29.2"	"100.000"	"97.7006"	"34633"	"34633"	"34615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.3"	""	"29.5"	""	"47.3"	""	"48.9"	"1.1"	"54.1"	"54.2"	""	"449"	"22"	"33.000"	"26.000"	"0.150043209494154"	"21"	"0.004213"	"0.04627"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFGFIER"	"[K].eAFGFIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"599.32642"	"1197.64556"	"1197.64654"	"-0.82"	"-0.00049"	"6/68"	"6"	"68"	"270597.653930664"	"HCD"	"MS2"	"34.2918"	"20.3"	"100.000"	"86.9976"	"30348"	"30348"	"30327"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"35.2"	""	"22.2"	""	"34.8"	""	"40.6"	"37.0"	""	"447"	"33"	"33.000"	"26.000"	"0.0124244601499935"	"23"	"0.0001991"	"0.002683"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFGFIER"	"[K].eAFGFIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"599.32642"	"1197.64556"	"1197.64654"	"-0.82"	"-0.00049"	"6/68"	"6"	"68"	"322967.572692871"	"HCD"	"MS2"	"13.7114"	"22.6"	"100.000"	"87.0607"	"30339"	"30339"	"30316"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.8"	""	"28.9"	""	"35.8"	""	"38.1"	"2.4"	"39.4"	"37.3"	""	"447"	"30"	"33.000"	"26.000"	"0.0218412518883624"	"18"	"0.0001991"	"0.003142"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEFLQR"	"[R].fEEFLQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"599.32642"	"1197.64556"	"1197.64654"	"-0.82"	"-0.00049"	"5/52"	"5"	"52"	"497391.659301758"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"97.7422"	"34681"	"34681"	"34663"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.7"	""	"42.8"	""	"49.0"	""	"48.4"	""	"53.2"	"67.1"	""	"447"	"22"	"33.000"	"26.000"	"0.150757014190485"	"20"	"0.005632"	"0.07069"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEFLQR"	"[R].fEEFLQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"599.32654"	"1197.64580"	"1197.64654"	"-0.62"	"-0.00037"	"5/52"	"5"	"52"	"1281366.38336182"	"HCD"	"MS2"	"2.980138"	"68.5"	"100.000"	"97.4445"	"34560"	"34560"	"34544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.8"	""	"90.8"	""	"90.5"	""	"112.6"	""	"122.8"	"134.9"	""	"446"	"34"	"33.000"	"26.000"	"0.00942551009812294"	"23"	"0.001348"	"0.01094"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFGFIER"	"[K].eAFGFIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"599.32666"	"1197.64604"	"1197.64654"	"-0.41"	"-0.00025"	"5/68"	"5"	"68"	"878075.564697266"	"HCD"	"MS2"	"16.54875"	"52.5"	"100.000"	"87.3115"	"30474"	"30474"	"30457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"65.9"	""	"77.2"	""	"93.3"	""	"92.9"	"91.3"	""	"459"	"35"	"33.000"	"26.000"	"0.0077764733833947"	"20"	"0.0001686"	"0.001102"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFGFIER"	"[K].eAFGFIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"599.32690"	"1197.64653"	"1197.64654"	"-0.01"	"0.00000"	"5/68"	"5"	"68"	"801433.937988281"	"HCD"	"MS2"	"19.50342"	"46.2"	"100.000"	"87.3724"	"30464"	"30464"	"30445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.7"	""	"59.0"	""	"67.7"	""	"72.8"	""	"82.6"	"87.2"	""	"444"	"38"	"33.000"	"26.000"	"0.00377879188863679"	"21"	"0.0001991"	"0.002559"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEFLQR"	"[R].fEEFLQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"599.32690"	"1197.64653"	"1197.64654"	"-0.01"	"0.00000"	"5/52"	"5"	"52"	"1310599.1126709"	"HCD"	"MS2"	"3.851691"	"76.7"	"100.000"	"97.4050"	"34513"	"34513"	"34497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.3"	""	"91.7"	""	"99.4"	""	"126.4"	""	"159.5"	"143.3"	""	"444"	"34"	"33.000"	"26.000"	"0.00934013115013467"	""	"0.001488"	"0.01269"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"399.88901"	"1197.65247"	"1197.65375"	"-1.07"	"-0.00043"	"10/82"	"10"	"82"	"1788235.01306152"	"HCD"	"MS2"	"49.68428"	"58.8"	"100.000"	"22.0585"	"4087"	"4087"	"4082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"77.9"	""	"73.5"	""	"109.7"	""	"115.5"	"92.7"	""	"442"	"20"	"33.000"	"26.000"	"0.221509457615216"	"19"	"0.0001991"	"0.002913"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"399.88901"	"1197.65247"	"1197.65375"	"-1.07"	"-0.00043"	"6/82"	"6"	"82"	"4545079.91583252"	"HCD"	"MS2"	"27.33815"	"104.9"	"100.000"	"22.3271"	"4189"	"4189"	"4181"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.1"	""	"132.8"	""	"126.2"	""	"199.8"	"0.9"	"205.7"	"169.5"	""	"442"	"42"	"33.000"	"26.000"	"0.00139441573130123"	"21"	"0"	"0.0003385"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"399.88916"	"1197.65293"	"1197.65375"	"-0.69"	"-0.00027"	"11/82"	"11"	"82"	"4132115.1583252"	"HCD"	"MS2"	"25.75963"	"86.2"	"100.000"	"22.1396"	"4157"	"4157"	"4148"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.9"	""	"108.8"	""	"92.2"	""	"166.4"	"1.1"	"163.7"	"155.2"	""	"441"	"38"	"33.000"	"26.000"	"0.00376191166775189"	"23"	"9.9E-05"	"0.0005051"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.33026"	"1197.65325"	"1197.65375"	"-0.42"	"-0.00025"	"11/82"	"11"	"82"	"525111.424743652"	"HCD"	"MS2"	"0"	"27.5"	"100.000"	"22.1026"	"4143"	"4143"	"4133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"33.0"	""	"24.5"	""	"72.1"	""	"61.2"	"44.6"	""	"441"	"29"	"33.000"	"26.000"	"0.0310748180052023"	"14"	"9.9E-05"	"0.0005166"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVLGNDGHR"	"[K].tVLGNDGHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.33044"	"1197.65361"	"1197.65375"	"-0.12"	"-0.00007"	"6/82"	"6"	"82"	"485109.444580078"	"HCD"	"MS2"	"11.40947"	"23.4"	"100.000"	"22.2394"	"4155"	"4155"	"4143"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"28.3"	""	"18.3"	""	"53.4"	""	"62.4"	"38.7"	""	"432"	"25"	"33.000"	"26.000"	"0.0735281689754162"	"14"	"0.0001686"	"0.001613"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"399.90884"	"1197.71198"	"1197.71529"	"-2.76"	"-0.00110"	"8/86"	"8"	"86"	"930324.893981934"	"HCD"	"MS2"	"59.6358"	"47.9"	"100.000"	"44.8655"	"13238"	"13238"	"13210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.7"	""	"65.3"	""	"63.3"	""	"86.2"	"0.8"	"92.5"	"87.8"	""	"298"	"9"	"31.000"	"24.000"	"1.77904227565177"	"13"	"0.002525"	"0.02392"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"399.90912"	"1197.71280"	"1197.71529"	"-2.07"	"-0.00083"	"10/86"	"10"	"86"	"1091236.54980469"	"HCD"	"MS2"	"34.80548"	"46.0"	"100.000"	"44.7237"	"13214"	"13214"	"13188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.8"	""	"68.1"	""	"45.2"	""	"77.7"	"0.8"	"93.6"	"87.6"	""	"296"	"21"	"31.000"	"24.000"	"0.106233555108162"	"18"	"0.0001991"	"0.005925"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"599.36041"	"1197.71355"	"1197.71529"	"-1.45"	"-0.00087"	"6/68"	"6"	"68"	"918637.069458008"	"HCD"	"MS2"	"13.46824"	"53.8"	"100.000"	"61.9515"	"20205"	"20205"	"20177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.9"	""	"81.2"	""	"75.7"	""	"98.9"	""	"88.3"	"102.7"	""	"296"	"23"	"31.000"	"24.000"	"0.0711642235705598"	"16"	"0.002755"	"0.02928"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"599.36072"	"1197.71416"	"1197.71529"	"-0.94"	"-0.00056"	"10/86"	"10"	"86"	"2489033.14196777"	"HCD"	"MS2"	"44.55056"	"165.6"	"100.000"	"45.1478"	"13352"	"13352"	"13330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.2"	""	"203.6"	""	"191.6"	""	"287.2"	""	"316.1"	"306.6"	""	"270"	"18"	"31.000"	"24.000"	"0.21594033386298"	""	"0.001348"	"0.01101"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"599.36072"	"1197.71416"	"1197.71529"	"-0.94"	"-0.00056"	"11/68"	"11"	"68"	"7481082.14257813"	"HCD"	"MS2"	"0"	"288.4"	"100.000"	"62.5703"	"20456"	"20456"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"320.6"	""	"475.4"	""	"388.3"	""	"477.4"	"0.4"	"550.1"	"522.6"	""	"270"	"38"	"31.000"	"24.000"	"0.00193345366401929"	"17"	"9.9E-05"	"0.0006012"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"599.36078"	"1197.71428"	"1197.71529"	"-0.84"	"-0.00050"	"5/86"	"5"	"86"	"2631827.24230957"	"HCD"	"MS2"	"49.12864"	"173.1"	"100.000"	"44.9097"	"13289"	"13289"	"13267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.8"	""	"217.4"	""	"198.1"	""	"300.4"	""	"329.2"	"323.0"	""	"268"	"17"	"31.000"	"24.000"	"0.298610310002221"	""	"0.0001991"	"0.004398"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"599.36084"	"1197.71440"	"1197.71529"	"-0.74"	"-0.00044"	"8/86"	"8"	"86"	"1293574.00439453"	"HCD"	"MS2"	"11.66966"	"80.9"	"100.000"	"45.4445"	"13473"	"13473"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.2"	""	"104.4"	""	"101.6"	""	"120.5"	""	"156.9"	"155.5"	""	"268"	"18"	"31.000"	"24.000"	"0.1959317413772"	"17"	"0.00192"	"0.01586"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"599.36084"	"1197.71440"	"1197.71529"	"-0.74"	"-0.00044"	"6/68"	"6"	"68"	"1612201.4397583"	"HCD"	"MS2"	"8.357362"	"85.1"	"100.000"	"62.9608"	"20582"	"20582"	"20561"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.0"	""	"129.9"	""	"117.7"	""	"134.1"	""	"165.3"	"171.5"	""	"268"	"36"	"31.000"	"24.000"	"0.00330449271189402"	"19"	"0"	"0.0003983"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"599.36096"	"1197.71465"	"1197.71529"	"-0.53"	"-0.00032"	"11/68"	"11"	"68"	"1708546.63092041"	"HCD"	"MS2"	"3.139406"	"85.3"	"100.000"	"62.8831"	"20583"	"20583"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.0"	""	"134.1"	""	"112.7"	""	"136.0"	"0.6"	"165.2"	"164.6"	""	"268"	"38"	"31.000"	"24.000"	"0.00214340775834366"	"17"	"0"	"0.0001639"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"599.36096"	"1197.71465"	"1197.71529"	"-0.53"	"-0.00032"	"5/86"	"5"	"86"	"1981267.79425049"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"44.5290"	"13135"	"13135"	"13121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.7"	""	"164.0"	""	"117.6"	""	"183.0"	"0.1"	"191.0"	"182.9"	""	"268"	"14"	"31.000"	"24.000"	"0.488770288880315"	"18"	"0.001348"	"0.01104"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"599.36102"	"1197.71477"	"1197.71529"	"-0.43"	"-0.00026"	"8/68"	"8"	"68"	"7119968.11828613"	"HCD"	"MS2"	"0.701218"	"280.1"	"100.000"	"62.2590"	"20330"	"20330"	"20313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"305.3"	""	"480.6"	""	"376.1"	""	"444.3"	""	"525.0"	"527.6"	""	"268"	"32"	"31.000"	"24.000"	"0.00914333850149838"	"20"	"9.9E-05"	"0.0009547"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"599.36108"	"1197.71489"	"1197.71529"	"-0.33"	"-0.00020"	"5/86"	"5"	"86"	"1718132.63690186"	"HCD"	"MS2"	"33.25403"	"101.7"	"100.000"	"44.6822"	"13163"	"13163"	"13143"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.8"	""	"140.0"	""	"124.1"	""	"166.1"	"1.2"	"168.9"	"172.7"	""	"268"	"24"	"31.000"	"24.000"	"0.0548409284038215"	"20"	"0.0001991"	"0.003169"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"599.36115"	"1197.71501"	"1197.71529"	"-0.23"	"-0.00014"	"11/68"	"11"	"68"	"7484380.02203369"	"HCD"	"MS2"	"0"	"278.8"	"100.000"	"62.6567"	"20458"	"20458"	"20443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"308.9"	""	"459.7"	""	"384.3"	""	"455.7"	""	"529.9"	"505.6"	""	"268"	"39"	"31.000"	"24.000"	"0.00188410368233408"	"21"	"9.9E-05"	"0.0005617"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"599.36115"	"1197.71501"	"1197.71529"	"-0.23"	"-0.00014"	"7/68"	"7"	"68"	"7297159.75079346"	"HCD"	"MS2"	"0"	"281.2"	"100.000"	"62.3504"	"20334"	"20334"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.9"	""	"489.7"	""	"365.5"	""	"468.9"	""	"515.0"	"513.5"	""	"268"	"34"	"31.000"	"24.000"	"0.00554759564258439"	"20"	"9.9E-05"	"0.0005088"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGPLVEQGR"	"[R].lGPLVEQGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"599.36133"	"1197.71538"	"1197.71529"	"0.08"	"0.00005"	"10/68"	"10"	"68"	"1031118.81011963"	"HCD"	"MS2"	"10.4714"	"58.8"	"100.000"	"62.0392"	"20207"	"20207"	"20183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.7"	""	"95.4"	""	"82.4"	""	"97.4"	""	"100.0"	"111.7"	""	"264"	"29"	"31.000"	"24.000"	"0.0161277555141763"	"17"	"0.002035"	"0.01795"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVQAPPSR"	"[K].lTVQAPPSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"599.36133"	"1197.71538"	"1197.71529"	"0.08"	"0.00005"	"5/86"	"5"	"86"	"1316483.32751465"	"HCD"	"MS2"	"0"	"87.8"	"100.000"	"45.2247"	"13418"	"13418"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.8"	""	"130.1"	""	"104.3"	""	"149.5"	""	"151.2"	"154.2"	""	"264"	"24"	"31.000"	"24.000"	"0.0506493564049808"	"20"	"0.001049"	"0.008568"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPDILLR"	"[K].lEPDILLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02356"	"AMP deaminase 2 OS=Rattus norvegicus OX=10116 GN=Ampd2 PE=1 SV=2"	"Q02356"	"AMP deaminase 2 OS=Rattus norvegicus OX=10116 GN=Ampd2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.37366"	"1197.74004"	"1197.74044"	"-0.34"	"-0.00020"	"4/60"	"4"	"60"	"455684.740600586"	"HCD"	"MS2"	"54.08421"	"24.8"	"100.000"	"105.0044"	"37578"	"37578"	"37560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.4"	""	"28.4"	""	"31.2"	""	"50.1"	""	"45.4"	"48.4"	""	"172"	"24"	"29.000"	"22.000"	"0.0341584732543719"	"14"	"0.001348"	"0.01076"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPDILLR"	"[K].lEPDILLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02356"	"AMP deaminase 2 OS=Rattus norvegicus OX=10116 GN=Ampd2 PE=1 SV=2"	"Q02356"	"AMP deaminase 2 OS=Rattus norvegicus OX=10116 GN=Ampd2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.37408"	"1197.74089"	"1197.74044"	"0.38"	"0.00023"	"5/60"	"5"	"60"	"420245.672363281"	"HCD"	"MS2"	"49.19813"	"24.6"	"100.000"	"105.2397"	"37691"	"37691"	"37672"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"29.4"	""	"27.0"	""	"48.3"	""	"47.0"	"50.2"	""	"170"	"21"	"29.000"	"22.000"	"0.0620038883716383"	"14"	"0.007104"	"0.09044"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEFYLR"	"[K].eLEFYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"599.83673"	"1198.66619"	"1198.66694"	"-0.63"	"-0.00038"	"9/52"	"9"	"52"	"1226038.4430542"	"HCD"	"MS2"	"28.73983"	"60.9"	"100.000"	"100.5987"	"35808"	"35808"	"35787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.8"	""	"85.7"	""	"97.7"	""	"105.8"	"0.2"	"100.6"	"90.0"	""	"502"	"14"	"33.000"	"27.000"	"1.04153464701225"	"16"	"0.002834"	"0.03032"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEFYLR"	"[K].eLEFYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"599.83704"	"1198.66680"	"1198.66694"	"-0.12"	"-0.00007"	"6/52"	"6"	"52"	"2405229.01739502"	"HCD"	"MS2"	"0"	"114.5"	"100.000"	"100.8640"	"35916"	"35916"	"35906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.4"	""	"159.4"	""	"192.4"	""	"200.4"	"1.2"	"211.2"	"160.4"	""	"496"	"24"	"33.000"	"26.000"	"0.0953787619472478"	"20"	"0.002525"	"0.02437"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEFYLR"	"[K].eLEFYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"599.83704"	"1198.66680"	"1198.66694"	"-0.12"	"-0.00007"	"7/52"	"7"	"52"	"2926730.01812744"	"HCD"	"MS2"	"2.390012"	"132.5"	"100.000"	"100.8538"	"35939"	"35939"	"35921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.5"	""	"193.2"	""	"229.9"	""	"230.3"	""	"223.2"	"181.7"	""	"496"	"30"	"33.000"	"26.000"	"0.0255535757869521"	"24"	"0.002508"	"0.02346"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEFYLR"	"[K].eLEFYLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"599.83710"	"1198.66692"	"1198.66694"	"-0.02"	"-0.00001"	"7/52"	"7"	"52"	"586753.897644043"	"HCD"	"MS2"	"5.862212"	"32.0"	"100.000"	"101.1309"	"36050"	"36050"	"36037"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.9"	""	"46.5"	""	"49.8"	""	"56.1"	"0.8"	"55.2"	"52.0"	""	"496"	"30"	"33.000"	"26.000"	"0.0274442698426461"	"20"	"0.001596"	"0.01297"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHQAEGK"	"[R].aHQAEGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"400.23596"	"1198.69333"	"1198.69444"	"-0.93"	"-0.00037"	"5/56"	"5"	"56"	"2926992.93017578"	"HCD"	"MS2"	"42.86349"	"265.5"	"100.000"	"18.8721"	"2892"	"2892"	"2872"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"370.1"	""	"281.6"	""	"320.4"	""	"465.2"	""	"526.5"	"560.1"	""	"419"	"9"	"33.000"	"26.000"	"2.6012615844061"	"19"	"0.00981"	"0.1326"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AHQAEGK"	"[R].aHQAEGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"400.23608"	"1198.69370"	"1198.69444"	"-0.62"	"-0.00025"	"5/56"	"5"	"56"	"2883170.47857666"	"HCD"	"MS2"	"42.2634"	"264.2"	"100.000"	"18.8962"	"2862"	"2862"	"2843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"360.4"	""	"297.1"	""	"341.7"	""	"439.2"	""	"528.2"	"545.0"	""	"419"	"7"	"33.000"	"26.000"	"3.76863456719481"	"20"	"0.006267"	"0.07776"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHQAEGK"	"[R].aHQAEGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"599.85059"	"1198.69390"	"1198.69444"	"-0.46"	"-0.00027"	"10/56"	"10"	"56"	"242222.570678711"	"HCD"	"MS2"	"19.99108"	"24.0"	"100.000"	"18.8787"	"2895"	"2895"	"2872"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"28.0"	""	"27.0"	""	"42.1"	""	"48.9"	"49.4"	""	"419"	"28"	"33.000"	"26.000"	"0.0346085996728979"	"16"	"0.0001991"	"0.003329"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHQAEGK"	"[R].aHQAEGk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"Q9R063"	"Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.85065"	"1198.69402"	"1198.69444"	"-0.35"	"-0.00021"	"9/56"	"9"	"56"	"175947.477539063"	"HCD"	"MS2"	"10.04897"	"19.0"	"100.000"	"18.9123"	"2869"	"2869"	"2843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.6"	""	"16.2"	""	"26.4"	""	"30.5"	""	"42.6"	"45.3"	""	"420"	"26"	"33.000"	"26.000"	"0.053115257925369"	"14"	"0.002875"	"0.03109"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTTLPR"	"[K].aPDVTTLPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"599.85248"	"1198.69768"	"1198.69930"	"-1.35"	"-0.00081"	"8/70"	"8"	"70"	"1742928.35662842"	"HCD"	"MS2"	"8.904035"	"73.1"	"100.000"	"55.0702"	"17416"	"17416"	"17394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.2"	""	"86.1"	""	"93.3"	""	"138.1"	""	"136.6"	"151.1"	""	"403"	"36"	"33.000"	"26.000"	"0.00478933317754913"	"22"	"0"	"0.0002371"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDVTTLPR"	"[K].aPDVTTLPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"Q8CGU6"	"Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"599.85309"	"1198.69890"	"1198.69930"	"-0.34"	"-0.00020"	"8/70"	"8"	"70"	"1766682.39257813"	"HCD"	"MS2"	"7.882283"	"71.6"	"100.000"	"55.3992"	"17516"	"17516"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.0"	""	"77.6"	""	"97.2"	""	"118.6"	""	"143.2"	"160.6"	""	"383"	"34"	"32.000"	"25.000"	"0.00765894195792502"	"22"	"0"	"0.000292"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].GYYAVAVVk.[A]"	"K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"599.85529"	"1198.70329"	"1198.70333"	"-0.03"	"-0.00002"	"5/66"	"5"	"66"	"922745.601928711"	"HCD"	"MS2"	"66.30089"	"47.0"	"100.000"	"64.5812"	"21273"	"21273"	"21243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"62.3"	""	"75.9"	""	"72.0"	"0.1"	"78.0"	"87.0"	""	"341"	"27"	"32.000"	"25.000"	"0.034176248066576"	"19"	"0.001615"	"0.01351"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYAVAVVK"	"[K].GYYAVAVVk.[A]"	"K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"599.85565"	"1198.70403"	"1198.70333"	"0.58"	"0.00035"	"5/66"	"5"	"66"	"825632.56237793"	"HCD"	"MS2"	"67.0064"	"41.1"	"100.000"	"64.5135"	"21211"	"21211"	"21192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.4"	""	"54.9"	""	"63.6"	""	"59.5"	""	"71.3"	"73.7"	""	"340"	"27"	"32.000"	"25.000"	"0.0356819780215999"	"19"	"0.001348"	"0.01091"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"599.85889"	"1198.71050"	"1198.71054"	"-0.03"	"-0.00002"	"7/84"	"7"	"84"	"3522409.18426514"	"HCD"	"MS2"	"0.9187037"	"172.7"	"100.000"	"42.1684"	"12138"	"12138"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.5"	""	"203.2"	""	"236.2"	""	"302.2"	""	"324.0"	"334.0"	""	"324"	"35"	"32.000"	"25.000"	"0.00521813144187916"	""	"0"	"2.76E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"599.85895"	"1198.71062"	"1198.71054"	"0.07"	"0.00004"	"8/84"	"8"	"84"	"19808205.2782593"	"HCD"	"MS2"	"0"	"517.6"	"65.865"	"41.7492"	"12002"	"12002"	"11987"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"773.7"	""	"623.1"	""	"762.1"	""	"816.9"	""	"969.4"	"964.0"	""	"322"	"47"	"32.000"	"25.000"	"0.000309617768354535"	""	"0"	"7.159E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"599.85901"	"1198.71074"	"1198.71054"	"0.17"	"0.00010"	"8/84"	"8"	"84"	"2845521.63024902"	"HCD"	"MS2"	"0"	"150.1"	"100.000"	"42.0626"	"12130"	"12130"	"12113"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.2"	""	"165.8"	""	"210.3"	""	"257.1"	""	"279.2"	"301.6"	""	"322"	"31"	"32.000"	"25.000"	"0.0134532085935231"	"22"	"9.9E-05"	"0.0007181"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"599.85913"	"1198.71099"	"1198.71054"	"0.37"	"0.00022"	"8/84"	"8"	"84"	"19712007.338562"	"HCD"	"MS2"	"0.2164242"	"597.0"	"73.687"	"41.8601"	"12013"	"12013"	"12002"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"867.5"	""	"723.4"	""	"822.1"	""	"955.0"	""	"1142.7"	"1157.4"	""	"322"	"47"	"32.000"	"25.000"	"0.000309617768354535"	""	"0"	"6.551E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"599.86139"	"1198.71550"	"1198.71054"	"4.14"	"0.00248"	"8/84"	"8"	"84"	"5991838.37097168"	"HCD"	"MS2"	"0"	"384.3"	"100.000"	"41.5665"	"11893"	"11893"	"11880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"462.9"	""	"390.9"	""	"454.0"	""	"772.5"	""	"775.3"	"794.8"	""	"310"	"26"	"31.000"	"24.000"	"0.0392944937727176"	""	"0.0001991"	"0.00375"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGQIIPTAR"	"[R].gGGQIIPTAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"599.86249"	"1198.71770"	"1198.71054"	"5.98"	"0.00358"	"8/84"	"8"	"84"	"6431483.99920654"	"HCD"	"MS2"	"0"	"415.9"	"100.000"	"41.4521"	"11881"	"11881"	"11862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"520.8"	""	"431.6"	""	"498.7"	""	"798.9"	"0.7"	"857.7"	"840.9"	""	"310"	"23"	"31.000"	"24.000"	"0.0701991248850612"	""	"9.9E-05"	"0.0008549"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"599.87048"	"1198.73369"	"1198.73569"	"-1.67"	"-0.00100"	"6/68"	"6"	"68"	"6242828.81622314"	"HCD"	"MS2"	"7.497849"	"158.7"	"100.000"	"65.0503"	"21464"	"21464"	"21449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.2"	""	"216.6"	""	"207.5"	""	"264.6"	"1.7"	"305.5"	"306.6"	""	"250"	"38"	"30.000"	"23.000"	"0.00218227769115063"	""	"0.002525"	"0.02365"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"599.87061"	"1198.73393"	"1198.73569"	"-1.46"	"-0.00088"	"6/68"	"6"	"68"	"6891625.53912354"	"HCD"	"MS2"	"2.720854"	"171.9"	"100.000"	"65.0790"	"21442"	"21442"	"21426"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.9"	""	"232.8"	""	"213.0"	""	"294.6"	"0.4"	"320.2"	"343.1"	""	"250"	"38"	"30.000"	"23.000"	"0.00215233571873251"	""	"0.0001686"	"0.001454"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"599.87128"	"1198.73528"	"1198.73569"	"-0.34"	"-0.00021"	"6/68"	"6"	"68"	"25738468.8001709"	"HCD"	"MS2"	"0"	"323.9"	"35.605"	"65.6914"	"21692"	"21692"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"396.5"	""	"439.5"	""	"444.4"	""	"527.5"	""	"607.7"	"660.0"	""	"233"	"40"	"30.000"	"23.000"	"0.00117307539421235"	""	"0"	"0.0002422"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"599.87146"	"1198.73564"	"1198.73569"	"-0.04"	"-0.00002"	"6/68"	"6"	"68"	"2731779.03430176"	"HCD"	"MS2"	"5.341369"	"113.1"	"100.000"	"65.9966"	"21849"	"21849"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.5"	""	"166.5"	""	"160.3"	""	"163.3"	""	"200.5"	"224.3"	""	"233"	"39"	"30.000"	"23.000"	"0.00133145326003008"	"23"	"0.002419"	"0.0228"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"599.87164"	"1198.73601"	"1198.73569"	"0.27"	"0.00016"	"6/68"	"6"	"68"	"2452108.20141602"	"HCD"	"MS2"	"8.750624"	"114.3"	"100.000"	"66.0069"	"21820"	"21820"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.5"	""	"152.3"	""	"149.7"	""	"187.8"	"0.7"	"203.2"	"226.2"	""	"230"	"34"	"30.000"	"23.000"	"0.00478297202068125"	"23"	"0.002711"	"0.02896"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"599.87189"	"1198.73650"	"1198.73569"	"0.67"	"0.00040"	"6/68"	"6"	"68"	"25545876.0002441"	"HCD"	"MS2"	"0.06693047"	"361.3"	"41.341"	"65.6927"	"21726"	"21726"	"21710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"434.4"	""	"494.7"	""	"489.5"	""	"565.6"	""	"684.7"	"759.1"	""	"230"	"38"	"30.000"	"23.000"	"0.0019085249435532"	""	"9.9E-05"	"0.0006044"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"599.87189"	"1198.73650"	"1198.73569"	"0.67"	"0.00040"	"6/68"	"6"	"68"	"48308015.3525391"	"HCD"	"MS2"	"0"	"426.6"	"24.920"	"65.3863"	"21601"	"21601"	"21584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"556.0"	""	"604.2"	""	"597.3"	""	"684.5"	""	"763.1"	"843.0"	""	"230"	"38"	"30.000"	"23.000"	"0.0019261843074304"	""	"0.0001991"	"0.003133"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTPEVLR"	"[K].vVGTPEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"599.87189"	"1198.73650"	"1198.73569"	"0.67"	"0.00040"	"6/68"	"6"	"68"	"50827188.5700684"	"HCD"	"MS2"	"0"	"425.8"	"23.649"	"65.3874"	"21568"	"21568"	"21551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"551.4"	""	"601.4"	""	"587.8"	""	"669.2"	""	"790.5"	"838.8"	""	"230"	"38"	"30.000"	"23.000"	"0.0019261843074304"	""	"0.0001991"	"0.003393"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSSDASK"	"[K].fSSDASk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"600.33698"	"1199.66667"	"1199.66722"	"-0.46"	"-0.00028"	"6/56"	"6"	"56"	"1489270.40655518"	"HCD"	"MS2"	"23.11897"	"130.7"	"100.000"	"38.5348"	"10705"	"10705"	"10676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.4"	""	"138.8"	""	"153.9"	""	"189.9"	""	"256.6"	"336.2"	""	"533"	"31"	"34.000"	"27.000"	"0.0191292178623818"	""	"0.0001991"	"0.005693"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSSDASK"	"[K].fSSDASk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"600.33789"	"1199.66850"	"1199.66722"	"1.07"	"0.00064"	"6/56"	"6"	"56"	"1522618.22045898"	"HCD"	"MS2"	"14.23131"	"140.2"	"100.000"	"38.6429"	"10713"	"10713"	"10686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.7"	""	"142.0"	""	"157.1"	""	"205.4"	""	"282.4"	"352.5"	""	"525"	"33"	"34.000"	"27.000"	"0.0126220328968054"	""	"0.0001991"	"0.005791"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVPEDLR"	"[K].lEVPEDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"Q80WE1"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"600.34448"	"1199.68169"	"1199.68332"	"-1.36"	"-0.00082"	"7/64"	"7"	"64"	"329695.905151367"	"HCD"	"MS2"	"41.4807"	"19.9"	"100.000"	"80.9881"	"27923"	"27923"	"27900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"23.6"	""	"25.2"	""	"31.6"	""	"38.9"	"46.8"	""	"501"	"27"	"33.000"	"26.000"	"0.0525784440847693"	""	"0.002189"	"0.02025"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"600.34497"	"1199.68266"	"1199.68332"	"-0.55"	"-0.00033"	"7/68"	"7"	"68"	"1399148.70507813"	"HCD"	"MS2"	"16.87733"	"60.3"	"100.000"	"83.9563"	"29093"	"29093"	"29076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.7"	""	"75.7"	""	"80.3"	""	"95.1"	""	"116.0"	"124.0"	""	"483"	"24"	"33.000"	"26.000"	"0.0864802895602865"	""	"0.0001686"	"0.001242"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"600.34503"	"1199.68279"	"1199.68332"	"-0.44"	"-0.00027"	"7/68"	"7"	"68"	"1412977.28460693"	"HCD"	"MS2"	"34.20646"	"60.8"	"100.000"	"83.6607"	"28974"	"28974"	"28957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.8"	""	"86.9"	""	"84.9"	""	"88.2"	""	"103.8"	"120.4"	""	"483"	"30"	"33.000"	"26.000"	"0.0240390408290394"	""	"0.0001686"	"0.001088"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"600.34503"	"1199.68279"	"1199.68332"	"-0.44"	"-0.00027"	"7/68"	"7"	"68"	"1655520.03546143"	"HCD"	"MS2"	"22.8849"	"72.9"	"100.000"	"83.7060"	"29021"	"29021"	"29004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.7"	""	"96.2"	""	"100.3"	""	"104.6"	"2.6"	"135.1"	"141.1"	""	"483"	"30"	"33.000"	"26.000"	"0.0230630709524177"	""	"0.0001686"	"0.001396"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPDVLER"	"[K].eLPDVLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"600.34521"	"1199.68315"	"1199.68332"	"-0.14"	"-0.00008"	"4/68"	"4"	"68"	"1432755.9208374"	"HCD"	"MS2"	"16.72231"	"59.9"	"100.000"	"84.0060"	"29142"	"29142"	"29130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.6"	""	"78.2"	""	"84.1"	""	"90.8"	""	"109.7"	"119.6"	""	"478"	"20"	"33.000"	"26.000"	"0.245695895252227"	""	"0.00455"	"0.0534"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQLEALR"	"[R].lQQLEALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"600.36835"	"1199.72942"	"1199.73094"	"-1.27"	"-0.00076"	"5/68"	"5"	"68"	"221422.702819824"	"HCD"	"MS2"	"58.41011"	"15.4"	"100.000"	"88.2886"	"30871"	"30871"	"30847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"20.5"	""	"19.0"	""	"29.1"	""	"33.4"	"22.4"	""	"315"	"19"	"31.000"	"24.000"	"0.183772514687102"	""	"0.001049"	"0.00884"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQLEALR"	"[R].lQQLEALR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"600.36951"	"1199.73174"	"1199.73094"	"0.67"	"0.00040"	"5/68"	"5"	"68"	"261162.088317871"	"HCD"	"MS2"	"65.47449"	"17.4"	"100.000"	"88.3383"	"30852"	"30852"	"30828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"16.8"	""	"25.4"	""	"29.4"	""	"32.4"	"41.5"	""	"297"	"21"	"31.000"	"24.000"	"0.105372298542563"	"24"	"0.0007633"	"0.007387"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGYSSGK"	"[R].sGGYSSGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.83466"	"1200.66203"	"1200.66247"	"-0.36"	"-0.00022"	"7/66"	"7"	"66"	"2248835.5657959"	"HCD"	"MS2"	"4.268857"	"195.6"	"100.000"	"25.3871"	"5423"	"5423"	"5405"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"293.6"	""	"238.1"	""	"275.4"	""	"311.4"	"24.3"	"345.0"	"364.9"	""	"509"	"22"	"34.000"	"27.000"	"0.176070982098869"	"14"	"0.0001991"	"0.004767"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGYSSGK"	"[R].sGGYSSGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"600.83502"	"1200.66277"	"1200.66247"	"0.25"	"0.00015"	"7/66"	"7"	"66"	"5755693.96795654"	"HCD"	"MS2"	"0"	"474.5"	"100.000"	"25.3052"	"5354"	"5354"	"5340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"773.9"	""	"622.2"	""	"646.5"	""	"748.6"	""	"822.0"	"883.3"	""	"509"	"37"	"34.000"	"27.000"	"0.00525639249653779"	"17"	"0.0001991"	"0.003062"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILAQDGQR"	"[K].aILAQDGQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"Q9WVT0"	"Adhesion G protein-coupled receptor F5 OS=Rattus norvegicus OX=10116 GN=Adgrf5 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"600.84784"	"1200.68840"	"1200.68980"	"-1.17"	"-0.00070"	"8/72"	"8"	"72"	"891280.229980469"	"HCD"	"MS2"	"42.25744"	"81.7"	"100.000"	"37.2832"	"10160"	"10160"	"10131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.3"	""	"77.0"	""	"75.3"	""	"141.0"	""	"203.6"	"182.5"	""	"498"	"17"	"33.000"	"26.000"	"0.532352560286056"	"20"	"0.001162"	"0.009263"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAIQEIQR"	"[K].nAIQEIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"600.84937"	"1200.69145"	"1200.68980"	"1.38"	"0.00083"	"5/70"	"5"	"70"	"994149.314147949"	"HCD"	"MS2"	"35.07504"	"74.0"	"100.000"	"38.8269"	"10788"	"10788"	"10765"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.1"	""	"94.2"	""	"93.9"	""	"120.6"	""	"136.6"	"157.2"	""	"525"	"28"	"34.000"	"27.000"	"0.0410326256193251"	""	"0.0001991"	"0.002983"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAIQEIQR"	"[K].nAIQEIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"600.84998"	"1200.69267"	"1200.68980"	"2.39"	"0.00144"	"6/70"	"6"	"70"	"949417.885375977"	"HCD"	"MS2"	"30.71834"	"71.0"	"100.000"	"38.7577"	"10796"	"10796"	"10770"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.0"	""	"88.3"	""	"86.7"	""	"120.5"	"0.7"	"134.1"	"144.2"	""	"506"	"39"	"34.000"	"27.000"	"0.00357371998789557"	"27"	"0.0001991"	"0.002156"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"600.86060"	"1200.71391"	"1200.71495"	"-0.86"	"-0.00052"	"13/76"	"13"	"76"	"2425299.82330322"	"HCD"	"MS2"	"3.556458"	"108.0"	"100.000"	"52.9426"	"16548"	"16548"	"16530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.6"	""	"133.7"	""	"163.5"	""	"175.5"	"2.3"	"166.4"	"221.4"	""	"504"	"45"	"34.000"	"27.000"	"0.000875791126836878"	"23"	"0"	"0.0001861"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"600.86072"	"1200.71416"	"1200.71495"	"-0.66"	"-0.00040"	"12/76"	"12"	"76"	"13985792.3945923"	"HCD"	"MS2"	"0.7201989"	"454.8"	"88.140"	"52.9241"	"16507"	"16507"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"714.4"	""	"536.6"	""	"692.4"	""	"733.2"	""	"703.6"	"927.5"	""	"504"	"40"	"34.000"	"27.000"	"0.00234639184617893"	"22"	"0"	"0.0002949"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"600.86084"	"1200.71440"	"1200.71495"	"-0.46"	"-0.00028"	"8/76"	"8"	"76"	"3281011.51269531"	"HCD"	"MS2"	"16.23713"	"138.2"	"100.000"	"52.6342"	"16388"	"16388"	"16371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"197.6"	""	"177.6"	""	"216.5"	""	"216.0"	""	"227.6"	"275.7"	""	"504"	"38"	"34.000"	"27.000"	"0.00431917241492123"	"21"	"9.9E-05"	"0.0004449"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"600.86090"	"1200.71453"	"1200.71495"	"-0.36"	"-0.00021"	"12/76"	"12"	"76"	"12318579.0853882"	"HCD"	"MS2"	"0"	"441.3"	"95.284"	"52.6296"	"16421"	"16421"	"16404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"693.6"	""	"521.3"	""	"683.6"	""	"701.1"	""	"692.2"	"887.0"	""	"506"	"40"	"34.000"	"27.000"	"0.00234487945314975"	"22"	"0"	"0.0003293"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"600.86096"	"1200.71465"	"1200.71495"	"-0.25"	"-0.00015"	"8/76"	"8"	"76"	"3401393.03649902"	"HCD"	"MS2"	"19.42388"	"144.0"	"100.000"	"52.3213"	"16295"	"16295"	"16278"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.4"	"3.1"	"173.3"	""	"206.2"	""	"249.1"	"1.2"	"227.0"	"275.0"	""	"505"	"38"	"34.000"	"27.000"	"0.00446952511975149"	"20"	"9.9E-05"	"0.0004159"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLADLVLR"	"[R].dGLADLVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1I3"	"Usher syndrome type-1C protein-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ushbp1 PE=2 SV=1"	"Q3T1I3"	"Usher syndrome type-1C protein-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ushbp1 PE=2 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"600.86121"	"1200.71514"	"1200.71495"	"0.15"	"0.00009"	"6/72"	"6"	"72"	"260744.505371094"	"HCD"	"MS2"	"23.50641"	"14.4"	"100.000"	"105.7675"	"37884"	"37884"	"37865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"19.7"	""	"13.5"	""	"27.9"	"1.0"	"27.0"	"32.4"	""	"505"	"29"	"34.000"	"27.000"	"0.0313517207667084"	"24"	"0.002166"	"0.01997"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTVPLEVR"	"[R].tGTVPLEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"600.86121"	"1200.71514"	"1200.71495"	"0.15"	"0.00009"	"12/76"	"12"	"76"	"2689341.01861572"	"HCD"	"MS2"	"1.344905"	"123.9"	"100.000"	"53.2465"	"16638"	"16638"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.0"	""	"147.3"	""	"182.0"	""	"199.9"	""	"204.5"	"254.4"	""	"505"	"38"	"34.000"	"27.000"	"0.00392881321980281"	"22"	"0"	"0.0001306"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLADLVLR"	"[R].dGLADLVLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1I3"	"Usher syndrome type-1C protein-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ushbp1 PE=2 SV=1"	"Q3T1I3"	"Usher syndrome type-1C protein-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ushbp1 PE=2 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"600.86139"	"1200.71550"	"1200.71495"	"0.46"	"0.00027"	"6/72"	"6"	"72"	"241772.153686523"	"HCD"	"MS2"	"17.41147"	"13.7"	"100.000"	"106.0386"	"38011"	"38011"	"37988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"13.2"	""	"14.8"	""	"26.5"	""	"29.3"	"27.7"	""	"505"	"23"	"34.000"	"27.000"	"0.129199663473928"	"26"	"0.002559"	"0.02573"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLTPTEVR"	"[R].rLTPTEVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"1"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"400.91251"	"1200.72297"	"1200.72619"	"-2.68"	"-0.00107"	"5/76"	"5"	"76"	"4636810.95220947"	"HCD"	"MS2"	"15.47343"	"143.0"	"100.000"	"27.0575"	"6040"	"6040"	"6027"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.1"	""	"183.8"	""	"218.7"	""	"214.5"	"4.0"	"272.5"	"278.0"	""	"468"	"35"	"33.000"	"26.000"	"0.00800231895482079"	"22"	"0.007069"	"0.08907"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLTPTEVR"	"[R].rLTPTEVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"1"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"400.91260"	"1200.72324"	"1200.72619"	"-2.45"	"-0.00098"	"5/76"	"5"	"76"	"4386709.66210938"	"HCD"	"MS2"	"37.33088"	"145.5"	"100.000"	"26.7745"	"5966"	"5966"	"5959"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.0"	""	"191.9"	""	"211.5"	""	"214.0"	"1.5"	"271.3"	"288.9"	""	"468"	"38"	"33.000"	"26.000"	"0.00395563178004524"	"24"	"0.005426"	"0.06889"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPSPTSQR"	"[R].lSPSPTSQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"601.34021"	"1201.67314"	"1201.67382"	"-0.56"	"-0.00034"	"8/76"	"8"	"76"	"3492913.14031982"	"HCD"	"MS2"	"0"	"161.4"	"100.000"	"29.0667"	"6885"	"6885"	"6865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.6"	""	"142.3"	""	"93.3"	""	"308.4"	""	"396.9"	"473.3"	""	"578"	"29"	"34.000"	"27.000"	"0.0353100101787648"	"21"	"0.004275"	"0.05031"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPSPTSQR"	"[R].lSPSPTSQR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"601.34064"	"1201.67400"	"1201.67382"	"0.15"	"0.00009"	"7/76"	"7"	"76"	"4181318.0390625"	"HCD"	"MS2"	"8.425294"	"179.0"	"100.000"	"29.2671"	"6926"	"6926"	"6899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.1"	""	"139.5"	""	"106.7"	""	"321.3"	""	"462.8"	"543.3"	""	"579"	"28"	"34.000"	"27.000"	"0.0511267949088644"	"20"	"9.9E-05"	"0.0006854"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"601.35278"	"1201.69829"	"1201.69897"	"-0.57"	"-0.00034"	"6/62"	"6"	"62"	"813829.102722168"	"HCD"	"MS2"	"35.46407"	"46.8"	"100.000"	"90.8958"	"31918"	"31918"	"31900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.0"	""	"65.4"	""	"75.2"	""	"66.0"	""	"81.6"	"88.1"	""	"733"	"38"	"35.000"	"28.000"	"0.0054585083498105"	"19"	"0"	"0.0002546"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"601.35309"	"1201.69890"	"1201.69897"	"-0.06"	"-0.00003"	"12/62"	"12"	"62"	"1955506.73730469"	"HCD"	"MS2"	"3.831544"	"96.1"	"100.000"	"91.1754"	"32031"	"32031"	"32019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.8"	""	"141.7"	""	"145.1"	""	"121.9"	""	"153.0"	"214.2"	""	"728"	"48"	"35.000"	"28.000"	"0.000636944194659375"	"24"	"0"	"0.0002299"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"601.35327"	"1201.69927"	"1201.69897"	"0.25"	"0.00015"	"11/62"	"11"	"62"	"1899960.80877686"	"HCD"	"MS2"	"1.04767"	"87.4"	"100.000"	"91.2569"	"32027"	"32027"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.8"	""	"128.0"	""	"136.0"	""	"93.9"	""	"148.9"	"190.1"	""	"725"	"42"	"35.000"	"28.000"	"0.00236215292847055"	"23"	"9.9E-05"	"0.0008763"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLEEIER"	"[K].aLLEEIER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"601.35352"	"1201.69975"	"1201.69897"	"0.65"	"0.00039"	"6/62"	"6"	"62"	"775577.115905762"	"HCD"	"MS2"	"48.37996"	"44.4"	"100.000"	"90.9590"	"31906"	"31906"	"31883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.4"	""	"62.7"	""	"66.6"	""	"58.5"	""	"78.6"	"95.3"	""	"725"	"38"	"35.000"	"28.000"	"0.00562740291109804"	"19"	"9.9E-05"	"0.0006373"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGIDSLLR"	"[R].qAGIDSLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"601.35767"	"1201.70806"	"1201.71020"	"-1.79"	"-0.00107"	"8/82"	"8"	"82"	"767830.045471191"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"77.4841"	"26471"	"26471"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.0"	""	"50.7"	""	"61.2"	""	"77.6"	"0.4"	"96.4"	"102.3"	""	"682"	"25"	"35.000"	"28.000"	"0.120158467025488"	"25"	"0.0001991"	"0.002574"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGIDSLLR"	"[R].qAGIDSLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"601.35883"	"1201.71037"	"1201.71020"	"0.14"	"0.00009"	"8/82"	"8"	"82"	"925891.999450684"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"77.6378"	"26533"	"26533"	"26516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.2"	""	"55.5"	""	"66.0"	""	"95.7"	""	"109.2"	"111.0"	""	"650"	"29"	"35.000"	"28.000"	"0.0366339173257041"	"24"	"9.9E-05"	"0.0007361"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGIDSLLR"	"[R].qAGIDSLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"Q69BT7"	"Trafficking protein particle complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Trappc4 PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"601.35950"	"1201.71172"	"1201.71020"	"1.26"	"0.00076"	"8/82"	"8"	"82"	"751202.825744629"	"HCD"	"MS2"	"20.49933"	"45.5"	"100.000"	"77.8839"	"26660"	"26660"	"26641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"53.6"	""	"56.9"	""	"82.1"	""	"95.4"	"92.5"	""	"715"	"24"	"35.000"	"28.000"	"0.146310685853479"	"21"	"9.9E-05"	"0.0008472"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNQPVK"	"[K].aSNQPVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"601.36829"	"1201.72930"	"1201.73049"	"-1.00"	"-0.00060"	"6/56"	"6"	"56"	"3478671.19891357"	"HCD"	"MS2"	"26.02829"	"243.7"	"100.000"	"25.5595"	"5454"	"5454"	"5438"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"291.5"	""	"265.2"	""	"308.3"	""	"426.7"	""	"510.7"	"517.3"	""	"654"	"30"	"35.000"	"28.000"	"0.0300294759050131"	""	"0.002462"	"0.02297"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNQPVK"	"[K].aSNQPVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"601.36890"	"1201.73052"	"1201.73049"	"0.02"	"0.00001"	"6/56"	"6"	"56"	"3303299.27056885"	"HCD"	"MS2"	"23.00149"	"229.3"	"100.000"	"25.4193"	"5436"	"5436"	"5416"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.5"	""	"251.7"	""	"247.6"	""	"424.9"	""	"485.2"	"511.7"	""	"659"	"28"	"35.000"	"28.000"	"0.0543069508007655"	""	"0.002328"	"0.02231"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"601.37085"	"1201.73442"	"1201.73535"	"-0.78"	"-0.00047"	"8/88"	"8"	"88"	"2870822.11065674"	"HCD"	"MS2"	"3.713114"	"106.8"	"100.000"	"73.7988"	"24980"	"24980"	"24961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.4"	""	"139.7"	""	"133.3"	""	"171.4"	""	"207.0"	"210.1"	""	"559"	"74"	"34.000"	"27.000"	"1.23418940035251E-06"	""	"0"	"0.0002569"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"401.24966"	"1201.73444"	"1201.73535"	"-0.76"	"-0.00030"	"7/88"	"7"	"88"	"409088.116821289"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"73.8139"	"25016"	"25016"	"24992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"40.0"	""	"32.7"	""	"40.2"	""	"55.8"	"52.7"	""	"559"	"24"	"34.000"	"27.000"	"0.110504970309042"	"21"	"0.0042"	"0.04531"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"601.37091"	"1201.73454"	"1201.73535"	"-0.67"	"-0.00040"	"6/88"	"6"	"88"	"2113201.59472656"	"HCD"	"MS2"	"42.8449"	"96.1"	"100.000"	"73.5063"	"24861"	"24861"	"24842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.4"	""	"123.4"	""	"114.7"	""	"165.9"	""	"189.1"	"185.5"	""	"559"	"47"	"34.000"	"27.000"	"0.000555113529401385"	"25"	"0"	"0.0002773"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"601.37170"	"1201.73613"	"1201.73535"	"0.65"	"0.00039"	"6/88"	"6"	"88"	"1779877.17596436"	"HCD"	"MS2"	"44.00587"	"83.5"	"100.000"	"73.5743"	"24918"	"24918"	"24897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"109.3"	""	"109.0"	""	"139.2"	""	"165.2"	"170.2"	""	"546"	"50"	"34.000"	"27.000"	"0.000264949221058018"	"26"	"9.9E-05"	"0.0006771"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].QTALAELVk.[H]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"601.37189"	"1201.73650"	"1201.73535"	"0.95"	"0.00057"	"7/88"	"7"	"88"	"3492381.6282959"	"HCD"	"MS2"	"8.189226"	"120.3"	"100.000"	"73.8625"	"25036"	"25036"	"25021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.5"	""	"165.3"	""	"151.6"	""	"188.2"	""	"239.5"	"218.7"	""	"546"	"69"	"34.000"	"27.000"	"3.6573173566728E-06"	""	"0.0001686"	"0.001429"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDPTK"	"[K].gIIDPTk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"601.38080"	"1201.75432"	"1201.75564"	"-1.10"	"-0.00066"	"6/52"	"6"	"52"	"1099126.18347168"	"HCD"	"MS2"	"40.03497"	"77.9"	"100.000"	"58.3904"	"18726"	"18726"	"18702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.9"	""	"109.6"	""	"116.9"	""	"111.7"	"0.6"	"136.1"	"147.2"	""	"435"	"19"	"33.000"	"26.000"	"0.266968032776954"	"23"	"0.00455"	"0.0535"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDPTK"	"[K].gIIDPTk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"601.38104"	"1201.75481"	"1201.75564"	"-0.70"	"-0.00042"	"9/52"	"9"	"52"	"996306.581298828"	"HCD"	"MS2"	"41.32565"	"69.1"	"100.000"	"58.1785"	"18675"	"18675"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.5"	""	"88.0"	""	"99.3"	""	"105.7"	"4.5"	"118.3"	"130.0"	""	"426"	"19"	"33.000"	"26.000"	"0.260243327615118"	""	"0.004852"	"0.0593"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQELDLR"	"[K].sLQELDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"601.83929"	"1202.67131"	"1202.69422"	"-19.05"	"-0.01145"	"6/76"	"6"	"76"	"1148073.88336182"	"HCD"	"MS2"	"18.82052"	"56.3"	"100.000"	"76.5208"	"26085"	"26085"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.1"	""	"75.8"	""	"76.7"	""	"92.5"	"1.1"	"104.5"	"86.9"	""	"853"	"20"	"36.000"	"29.000"	"0.447629845820216"	"20"	"0.009781"	"0.1303"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEVVWVR"	"[K].aDEVVWVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"601.83966"	"1202.67204"	"1202.67309"	"-0.87"	"-0.00052"	"5/58"	"5"	"58"	"2202535.83508301"	"HCD"	"MS2"	"37.75042"	"95.2"	"100.000"	"74.0572"	"25085"	"25085"	"25065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.9"	""	"134.4"	""	"141.8"	""	"139.8"	""	"168.9"	"178.1"	""	"852"	"29"	"36.000"	"29.000"	"0.050397570273892"	"28"	"0.0005778"	"0.007092"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEVVWVR"	"[K].aDEVVWVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"601.84021"	"1202.67314"	"1202.67309"	"0.05"	"0.00003"	"5/58"	"5"	"58"	"2365527.15386963"	"HCD"	"MS2"	"44.48879"	"103.2"	"100.000"	"74.0953"	"25130"	"25130"	"25112"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.6"	""	"139.7"	""	"163.5"	""	"156.6"	""	"181.6"	"186.9"	""	"833"	"16"	"36.000"	"29.000"	"1.08296645805834"	"20"	"0.00192"	"0.01591"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQELDLR"	"[K].sLQELDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"0"	"2"	"2"	"0.3200"	"0.0000"	"1"	"1"	"1"	"601.85089"	"1202.69451"	"1202.69422"	"0.24"	"0.00014"	"6/76"	"6"	"76"	"1484367.54040527"	"HCD"	"MS2"	"41.75188"	"71.9"	"100.000"	"76.7005"	"26158"	"26158"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.5"	""	"95.5"	""	"119.6"	""	"107.3"	""	"135.5"	"123.2"	""	"802"	"25"	"36.000"	"29.000"	"0.120543659735392"	""	"0.0001991"	"0.002586"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQELDLR"	"[K].sLQELDLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"601.85120"	"1202.69512"	"1202.69422"	"0.75"	"0.00045"	"6/76"	"6"	"76"	"1500409.20904541"	"HCD"	"MS2"	"31.94423"	"70.7"	"100.000"	"76.7544"	"26211"	"26211"	"26192"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.5"	""	"96.6"	""	"103.2"	""	"108.2"	""	"141.5"	"106.6"	""	"802"	"27"	"36.000"	"29.000"	"0.0893602494857392"	"23"	"0.0001991"	"0.003469"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPGQVK"	"[K].sEPGQVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"601.86017"	"1202.71306"	"1202.71451"	"-1.20"	"-0.00072"	"9/54"	"9"	"54"	"2473896.71868896"	"HCD"	"MS2"	"0"	"171.6"	"100.000"	"28.5152"	"6663"	"6663"	"6647"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.9"	""	"236.5"	""	"257.8"	""	"253.5"	""	"290.1"	"302.8"	""	"796"	"28"	"35.000"	"29.000"	"0.0583288040700453"	"26"	"0.004234"	"0.04881"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPGQVK"	"[K].sEPGQVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"601.86041"	"1202.71355"	"1202.71451"	"-0.80"	"-0.00048"	"9/54"	"9"	"54"	"3607321.64801025"	"HCD"	"MS2"	"0"	"254.1"	"100.000"	"29.0718"	"6846"	"6846"	"6827"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"403.5"	""	"347.7"	""	"372.9"	""	"351.9"	"1.9"	"462.7"	"465.5"	""	"781"	"25"	"35.000"	"28.000"	"0.128121211960673"	"26"	"0.005426"	"0.06905"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSDPQK"	"[K].lGSDPQk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"601.86047"	"1202.71367"	"1202.71451"	"-0.70"	"-0.00042"	"5/52"	"5"	"52"	"4939474.26361084"	"HCD"	"MS2"	"2.121312"	"337.8"	"100.000"	"37.5679"	"10275"	"10275"	"10263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"414.7"	""	"365.2"	""	"383.7"	""	"610.0"	"0.5"	"720.3"	"714.9"	""	"781"	"34"	"35.000"	"28.000"	"0.0159448720362916"	"28"	"0.002189"	"0.02033"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPGQVK"	"[K].sEPGQVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"601.86053"	"1202.71379"	"1202.71451"	"-0.60"	"-0.00036"	"9/54"	"9"	"54"	"3036982.07965088"	"HCD"	"MS2"	"0"	"212.2"	"100.000"	"28.7549"	"6717"	"6717"	"6697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.0"	""	"318.5"	""	"308.4"	""	"308.1"	""	"365.1"	"386.3"	""	"781"	"24"	"35.000"	"28.000"	"0.162787494245166"	"26"	"0.004852"	"0.05968"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSDPQK"	"[K].lGSDPQk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"601.86078"	"1202.71428"	"1202.71451"	"-0.19"	"-0.00011"	"5/52"	"5"	"52"	"3547867.82946777"	"HCD"	"MS2"	"0"	"241.3"	"100.000"	"37.5192"	"10291"	"10291"	"10276"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.4"	""	"264.2"	""	"272.4"	""	"442.6"	""	"526.6"	"501.9"	""	"787"	"20"	"35.000"	"28.000"	"0.358050872780791"	"27"	"0.002875"	"0.03081"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPGQVK"	"[K].sEPGQVk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"601.86078"	"1202.71428"	"1202.71451"	"-0.19"	"-0.00011"	"9/54"	"9"	"54"	"5369996.96746826"	"HCD"	"MS2"	"0"	"346.8"	"100.000"	"28.8093"	"6781"	"6781"	"6764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"549.4"	"3.3"	"465.7"	""	"495.1"	""	"484.0"	""	"610.2"	"677.0"	""	"787"	"25"	"35.000"	"28.000"	"0.123579017104029"	"28"	"0.005507"	"0.06963"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQVFDVGPR"	"[R].gQVFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"602.33740"	"1203.66753"	"1203.66834"	"-0.67"	"-0.00040"	"7/78"	"7"	"78"	"3759639.50769043"	"HCD"	"MS2"	"26.23343"	"197.7"	"100.000"	"57.4445"	"18375"	"18375"	"18356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"328.3"	""	"275.2"	""	"280.4"	""	"289.8"	"0.4"	"348.9"	"348.2"	""	"850"	"40"	"36.000"	"29.000"	"0.0041437059602989"	"26"	"0"	"0.0003317"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQVFDVGPR"	"[R].gQVFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"602.33740"	"1203.66753"	"1203.66834"	"-0.67"	"-0.00040"	"7/78"	"7"	"78"	"3706814.02844238"	"HCD"	"MS2"	"29.78478"	"199.1"	"100.000"	"57.6981"	"18443"	"18443"	"18423"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.8"	""	"290.2"	""	"294.6"	""	"281.2"	"2.2"	"350.0"	"337.6"	""	"850"	"39"	"36.000"	"29.000"	"0.00551301190168182"	"25"	"0"	"0.0002219"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQVFDVGPR"	"[R].gQVFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"602.33740"	"1203.66753"	"1203.66834"	"-0.67"	"-0.00040"	"7/78"	"7"	"78"	"4575454.50183105"	"HCD"	"MS2"	"12.58708"	"137.0"	"100.000"	"57.7529"	"18501"	"18501"	"18482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.4"	""	"189.7"	""	"202.6"	""	"192.5"	"0.6"	"252.0"	"257.6"	""	"850"	"45"	"36.000"	"29.000"	"0.00149069546429842"	"26"	"0"	"0.0001828"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQVFDVGPR"	"[R].gQVFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"602.33765"	"1203.66802"	"1203.66834"	"-0.27"	"-0.00016"	"7/78"	"7"	"78"	"4810879.83404541"	"HCD"	"MS2"	"9.97058"	"228.7"	"100.000"	"57.9969"	"18565"	"18565"	"18550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"361.2"	""	"335.4"	""	"347.0"	""	"316.3"	"2.0"	"385.2"	"417.2"	""	"856"	"46"	"36.000"	"29.000"	"0.00110012939502508"	"27"	"9.9E-05"	"0.0004032"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GQVFDVGPR"	"[R].gQVFDVGPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"602.33862"	"1203.66997"	"1203.66834"	"1.36"	"0.00082"	"7/78"	"7"	"78"	"1539208.29968262"	"HCD"	"MS2"	"64.06064"	"106.1"	"100.000"	"58.0956"	"18641"	"18641"	"18622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.0"	""	"135.6"	""	"153.0"	""	"164.1"	""	"213.4"	"216.2"	""	"849"	"6"	"36.000"	"29.000"	"11.0376773456366"	"16"	"0.007485"	"0.09584"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSEVER"	"[K].eILSEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"602.34137"	"1203.67546"	"1203.67823"	"-2.30"	"-0.00139"	"6/68"	"6"	"68"	"992823.610778809"	"HCD"	"MS2"	"33.4249"	"58.7"	"100.000"	"64.8455"	"21380"	"21380"	"21362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.2"	""	"71.1"	""	"75.7"	""	"96.8"	"1.6"	"114.6"	"104.2"	""	"842"	"20"	"36.000"	"29.000"	"0.439827212291957"	"24"	"0.00192"	"0.0162"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSEVER"	"[K].eILSEVER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"602.34167"	"1203.67607"	"1203.67823"	"-1.79"	"-0.00108"	"6/68"	"6"	"68"	"749938.478210449"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"64.7731"	"21317"	"21317"	"21295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.0"	""	"55.4"	""	"53.4"	""	"69.9"	"1.7"	"82.0"	"72.7"	""	"841"	"28"	"36.000"	"29.000"	"0.0646794026247426"	""	"0.0001991"	"0.003262"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDTVGQR"	"[K].lVSDTVGQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"602.34827"	"1203.68926"	"1203.68947"	"-0.17"	"-0.00011"	"6/70"	"6"	"70"	"4736352.94921875"	"HCD"	"MS2"	"50.84689"	"214.8"	"100.000"	"42.8882"	"12432"	"12432"	"12409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"331.3"	""	"267.1"	""	"289.1"	""	"346.3"	""	"386.9"	"415.7"	""	"776"	"6"	"35.000"	"28.000"	"9.17976842624475"	"15"	"0.001596"	"0.01307"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAEINASR"	"[R].tLAEINASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"602.34839"	"1203.68950"	"1203.68947"	"0.03"	"0.00002"	"7/84"	"7"	"84"	"5361937.12365723"	"HCD"	"MS2"	"44.67557"	"298.1"	"100.000"	"45.3536"	"13470"	"13470"	"13451"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"409.8"	""	"362.4"	""	"396.0"	""	"481.8"	""	"584.5"	"599.0"	""	"772"	"46"	"35.000"	"28.000"	"0.000876167832827156"	""	"0"	"0.0002281"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAEINASR"	"[R].tLAEINASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"602.34888"	"1203.69048"	"1203.68947"	"0.84"	"0.00051"	"7/84"	"7"	"84"	"6107820.85406494"	"HCD"	"MS2"	"28.45775"	"310.4"	"100.000"	"45.6654"	"13563"	"13563"	"13541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"402.5"	""	"393.0"	""	"411.4"	""	"527.9"	"0.5"	"595.0"	"613.8"	""	"774"	"50"	"35.000"	"28.000"	"0.000414677971126953"	""	"0"	"0.0002746"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQINK"	"[R].gGEQINk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"602.35742"	"1203.70757"	"1203.70976"	"-1.82"	"-0.00110"	"5/54"	"5"	"54"	"779852.376647949"	"HCD"	"MS2"	"0"	"76.4"	"100.000"	"30.4891"	"7459"	"7459"	"7446"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.3"	""	"86.1"	""	"94.1"	""	"132.2"	""	"145.2"	"159.2"	""	"747"	"20"	"35.000"	"28.000"	"0.392004097101643"	"26"	"0.004852"	"0.06012"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGNVNK"	"[K].vDGNVNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5PQJ5"	"Rho GTPase-activating protein 29 OS=Rattus norvegicus OX=10116 GN=Arhgap29 PE=1 SV=2"	"Q5PQJ5"	"Rho GTPase-activating protein 29 OS=Rattus norvegicus OX=10116 GN=Arhgap29 PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"602.35815"	"1203.70903"	"1203.70976"	"-0.60"	"-0.00036"	"8/54"	"8"	"54"	"730951.790771484"	"HCD"	"MS2"	"29.08722"	"73.6"	"100.000"	"34.2909"	"8950"	"8950"	"8929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.9"	""	"83.7"	""	"93.1"	""	"128.6"	"2.9"	"146.9"	"152.5"	""	"735"	"14"	"35.000"	"28.000"	"1.3559926747453"	"24"	"0.004213"	"0.04589"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNGVVDK"	"[R].nNGVVDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"602.35864"	"1203.71001"	"1203.70976"	"0.21"	"0.00013"	"5/60"	"5"	"60"	"2989349.61981201"	"HCD"	"MS2"	"49.77633"	"266.5"	"100.000"	"31.6965"	"7899"	"7899"	"7873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"481.9"	""	"345.4"	""	"370.7"	""	"396.5"	"5.2"	"447.6"	"473.3"	""	"740"	"22"	"35.000"	"28.000"	"0.230251105512589"	"23"	"0.002286"	"0.02185"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNGVVDK"	"[R].nNGVVDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"602.35889"	"1203.71050"	"1203.70976"	"0.61"	"0.00037"	"6/60"	"6"	"60"	"2963140.0736084"	"HCD"	"MS2"	"25.89461"	"246.2"	"100.000"	"31.5947"	"7895"	"7895"	"7876"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"450.0"	""	"328.7"	""	"349.8"	""	"359.3"	""	"416.6"	"424.5"	""	"740"	"38"	"35.000"	"28.000"	"0.00637091372744823"	"26"	"0.001488"	"0.01229"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQINK"	"[R].gGEQINk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"602.35895"	"1203.71062"	"1203.70976"	"0.72"	"0.00043"	"6/54"	"6"	"54"	"676068.521484375"	"HCD"	"MS2"	"0"	"68.6"	"100.000"	"30.6617"	"7488"	"7488"	"7474"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.9"	""	"70.7"	""	"76.9"	""	"129.0"	""	"136.0"	"146.2"	""	"740"	"22"	"35.000"	"28.000"	"0.253047309494129"	"27"	"0.004073"	"0.0444"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEQINK"	"[R].gGEQINk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"3"	"602.35901"	"1203.71074"	"1203.70976"	"0.82"	"0.00049"	"5/54"	"5"	"54"	"1307279.65301514"	"HCD"	"MS2"	"18.23105"	"120.0"	"100.000"	"30.1976"	"7342"	"7342"	"7319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.4"	""	"115.8"	"2.3"	"125.4"	""	"231.9"	"0.8"	"259.0"	"234.0"	""	"741"	"21"	"35.000"	"28.000"	"0.318998185184395"	""	"0.00511"	"0.06471"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"602.37018"	"1203.73308"	"1203.73491"	"-1.52"	"-0.00091"	"6/54"	"6"	"54"	"9489103.17443848"	"HCD"	"MS2"	"10.96783"	"580.6"	"100.000"	"40.9432"	"11680"	"11680"	"11672"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"865.0"	""	"776.3"	""	"872.1"	""	"943.5"	""	"1000.0"	"1040.7"	""	"549"	"29"	"34.000"	"27.000"	"0.0354439690606915"	""	"0.003357"	"0.03732"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"602.37024"	"1203.73320"	"1203.73491"	"-1.42"	"-0.00085"	"6/54"	"6"	"54"	"1695769.26812744"	"HCD"	"MS2"	"24.921"	"132.9"	"100.000"	"41.2651"	"11805"	"11805"	"11782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.6"	"2.5"	"162.1"	""	"208.0"	""	"215.2"	"3.5"	"235.5"	"259.7"	""	"552"	"19"	"34.000"	"27.000"	"0.360503165124388"	"24"	"0.003818"	"0.04196"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"602.37024"	"1203.73320"	"1203.73491"	"-1.42"	"-0.00085"	"6/54"	"6"	"54"	"11952767.6794434"	"HCD"	"MS2"	"16.16431"	"766.4"	"100.000"	"41.0797"	"11700"	"11700"	"11684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1173.7"	""	"1084.2"	""	"1109.4"	""	"1231.2"	""	"1289.3"	"1366.2"	""	"552"	"29"	"34.000"	"27.000"	"0.0353923240813062"	""	"0.003786"	"0.04048"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVESVPK"	"[K].sVESVPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"602.37048"	"1203.73369"	"1203.73491"	"-1.01"	"-0.00061"	"6/54"	"6"	"54"	"1750714.85217285"	"HCD"	"MS2"	"16.71622"	"135.3"	"100.000"	"41.3955"	"11824"	"11824"	"11802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.8"	""	"176.2"	""	"214.3"	""	"204.5"	"1.7"	"247.3"	"244.7"	""	"553"	"24"	"34.000"	"27.000"	"0.0987859397490083"	""	"0.001615"	"0.01345"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETPSAK"	"[R].lETPSAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"602.37054"	"1203.73381"	"1203.73491"	"-0.91"	"-0.00055"	"5/54"	"5"	"54"	"6591870.35101318"	"HCD"	"MS2"	"22.9964"	"423.0"	"100.000"	"44.3543"	"13030"	"13030"	"13009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"822.8"	""	"638.8"	""	"613.8"	""	"552.1"	""	"690.6"	"683.3"	""	"550"	"21"	"34.000"	"27.000"	"0.226637981628576"	"27"	"0.003529"	"0.03865"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IADIADK"	"[K].iADIADk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VD48"	"Dehydrogenase/reductase SDR family member 9 OS=Rattus norvegicus OX=10116 GN=Dhrs9 PE=2 SV=1"	"Q8VD48"	"Dehydrogenase/reductase SDR family member 9 OS=Rattus norvegicus OX=10116 GN=Dhrs9 PE=2 SV=1"	"0"	"2"	"2"	"0.2333"	"0.0000"	"1"	"1"	"1"	"602.37061"	"1203.73393"	"1203.73491"	"-0.81"	"-0.00049"	"6/54"	"6"	"54"	"362676.550109863"	"HCD"	"MS2"	"15.92779"	"29.4"	"100.000"	"70.0496"	"23493"	"23493"	"23465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"29.9"	""	"36.6"	""	"52.2"	""	"61.5"	"56.8"	""	"539"	"30"	"34.000"	"27.000"	"0.0295500873860588"	""	"0.0001991"	"0.004015"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETPSAK"	"[R].lETPSAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"401.91623"	"1203.73413"	"1203.73491"	"-0.64"	"-0.00026"	"7/54"	"7"	"54"	"861599.3671875"	"HCD"	"MS2"	"60.32182"	"60.8"	"100.000"	"44.3158"	"13050"	"13050"	"13030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.9"	""	"89.2"	""	"88.8"	""	"96.7"	""	"106.4"	"98.6"	""	"539"	"22"	"34.000"	"27.000"	"0.185591793864782"	""	"0.004959"	"0.06211"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IADIADK"	"[K].iADIADk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VD48"	"Dehydrogenase/reductase SDR family member 9 OS=Rattus norvegicus OX=10116 GN=Dhrs9 PE=2 SV=1"	"Q8VD48"	"Dehydrogenase/reductase SDR family member 9 OS=Rattus norvegicus OX=10116 GN=Dhrs9 PE=2 SV=1"	"0"	"2"	"2"	"0.2188"	"0.0000"	"1"	"1"	"1"	"602.37073"	"1203.73418"	"1203.73491"	"-0.61"	"-0.00037"	"6/54"	"6"	"54"	"388607.811401367"	"HCD"	"MS2"	"25.2464"	"30.2"	"100.000"	"69.9396"	"23414"	"23414"	"23388"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.5"	""	"35.2"	""	"40.5"	""	"53.2"	""	"61.3"	"53.8"	""	"539"	"32"	"34.000"	"27.000"	"0.016313936574618"	""	"0.0001991"	"0.003066"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETPSAK"	"[R].lETPSAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"602.37073"	"1203.73418"	"1203.73491"	"-0.61"	"-0.00037"	"10/54"	"10"	"54"	"4261099.5111084"	"HCD"	"MS2"	"16.03599"	"289.8"	"100.000"	"44.6386"	"13145"	"13145"	"13130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"506.5"	""	"386.0"	""	"420.5"	""	"396.3"	""	"508.0"	"526.0"	""	"539"	"23"	"34.000"	"27.000"	"0.123469238469567"	"26"	"0.00307"	"0.03294"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LETPSAK"	"[R].lETPSAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"602.37109"	"1203.73491"	"1203.73491"	"0.00"	"0.00000"	"5/54"	"5"	"54"	"7005815.15386963"	"HCD"	"MS2"	"17.26663"	"406.4"	"100.000"	"44.1577"	"12986"	"12986"	"12969"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"792.7"	""	"593.6"	""	"591.4"	""	"544.8"	""	"665.5"	"653.7"	""	"543"	"20"	"34.000"	"27.000"	"0.289580846914015"	"26"	"0.00394"	"0.04289"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATQQGLK"	"[K].aTQQGLk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"602.37640"	"1203.74553"	"1203.74614"	"-0.51"	"-0.00031"	"12/56"	"12"	"56"	"4343091.94122314"	"HCD"	"MS2"	"33.69005"	"322.7"	"100.000"	"31.2450"	"7754"	"7754"	"7728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"535.9"	""	"392.1"	""	"450.2"	""	"531.1"	""	"511.3"	"636.9"	""	"409"	"39"	"33.000"	"26.000"	"0.0028099158389006"	"24"	"0.001488"	"0.01201"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATQQGLK"	"[K].aTQQGLk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"602.37653"	"1203.74578"	"1203.74614"	"-0.31"	"-0.00018"	"6/56"	"6"	"56"	"6126110.796875"	"HCD"	"MS2"	"25.05999"	"417.8"	"100.000"	"31.4052"	"7781"	"7781"	"7754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"715.0"	""	"507.4"	""	"577.5"	""	"668.8"	""	"672.9"	"813.9"	""	"416"	"36"	"33.000"	"26.000"	"0.00562423339734639"	"24"	"0.001951"	"0.01707"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATQQGLK"	"[K].aTQQGLk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"3"	"602.37714"	"1203.74700"	"1203.74614"	"0.71"	"0.00043"	"6/56"	"6"	"56"	"2970670.07043457"	"HCD"	"MS2"	"52.81656"	"255.1"	"100.000"	"31.5622"	"7882"	"7882"	"7860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"455.4"	""	"338.2"	""	"350.5"	""	"387.5"	"0.4"	"428.5"	"452.6"	""	"416"	"9"	"33.000"	"26.000"	"2.88445212405353"	"17"	"0.007752"	"0.09932"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTVLLK"	"[R].gDTVLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"602.38861"	"1203.76995"	"1203.77130"	"-1.12"	"-0.00067"	"4/50"	"4"	"50"	"2041780.01086426"	"HCD"	"MS2"	"50.86161"	"140.4"	"100.000"	"65.9759"	"21841"	"21841"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.5"	""	"211.1"	""	"196.6"	""	"225.9"	""	"247.1"	"253.0"	""	"286"	"11"	"31.000"	"24.000"	"1.06007364506031"	"17"	"0.006613"	"0.08257"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTVLLK"	"[R].gDTVLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"602.38873"	"1203.77019"	"1203.77130"	"-0.92"	"-0.00055"	"5/50"	"5"	"50"	"4687053.50628662"	"HCD"	"MS2"	"23.22815"	"321.1"	"100.000"	"66.2631"	"21958"	"21958"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.1"	""	"424.6"	""	"459.1"	""	"525.7"	""	"607.0"	"591.8"	""	"278"	"23"	"31.000"	"24.000"	"0.0668366694345123"	"23"	"0.004234"	"0.04937"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTVLLK"	"[R].gDTVLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"602.38879"	"1203.77031"	"1203.77130"	"-0.82"	"-0.00049"	"10/50"	"10"	"50"	"4613328.3092041"	"HCD"	"MS2"	"20.75116"	"325.3"	"100.000"	"66.2711"	"21928"	"21928"	"21909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"445.0"	""	"426.6"	""	"448.7"	""	"526.6"	"0.9"	"616.6"	"619.3"	""	"253"	"27"	"31.000"	"24.000"	"0.0235554022787853"	"22"	"0.00455"	"0.05331"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTVLLK"	"[R].gDTVLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"602.38916"	"1203.77104"	"1203.77130"	"-0.21"	"-0.00013"	"8/50"	"8"	"50"	"754802.963684082"	"HCD"	"MS2"	"0"	"64.5"	"100.000"	"66.5529"	"22040"	"22040"	"22023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.7"	""	"85.0"	""	"86.3"	""	"110.2"	"0.8"	"130.5"	"118.9"	""	"253"	"14"	"31.000"	"24.000"	"0.49101021297817"	"23"	"0.008135"	"0.1037"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQAENIMR"	"[R].nQAENIMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"602.81805"	"1204.62883"	"1204.63057"	"-1.44"	"-0.00087"	"6/70"	"6"	"70"	"2366729.38012695"	"HCD"	"MS2"	"41.44775"	"182.8"	"100.000"	"32.7086"	"8306"	"8306"	"8282"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.7"	""	"166.7"	""	"172.5"	""	"324.5"	""	"445.1"	"445.0"	""	"709"	"23"	"35.000"	"28.000"	"0.160922303102497"	"25"	"0.0001991"	"0.004871"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQTSQDAR"	"[K].gLQTSQDAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"602.82758"	"1204.64787"	"1204.64833"	"-0.38"	"-0.00023"	"6/82"	"6"	"82"	"800489.009338379"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"23.8730"	"4813"	"4813"	"4786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"45.2"	""	"55.2"	""	"83.7"	""	"96.6"	"95.5"	""	"821"	"46"	"36.000"	"29.000"	"0.000946919720969588"	"27"	"0"	"4.12E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQTSQDAR"	"[K].gLQTSQDAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"602.82782"	"1204.64836"	"1204.64833"	"0.03"	"0.00002"	"6/82"	"6"	"82"	"513116.627502441"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"24.0070"	"4830"	"4830"	"4807"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.7"	""	"38.9"	""	"48.7"	""	"71.1"	"0.7"	"75.0"	"69.8"	""	"807"	"46"	"36.000"	"29.000"	"0.00108853786099153"	"29"	"9.9E-05"	"0.0004483"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTGWLDR"	"[R].iDTGWLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"602.82953"	"1204.65178"	"1204.65235"	"-0.47"	"-0.00029"	"7/66"	"7"	"66"	"978951.649963379"	"HCD"	"MS2"	"59.15383"	"43.2"	"100.000"	"94.7416"	"33469"	"33469"	"33447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.1"	""	"59.0"	""	"54.1"	""	"74.3"	""	"65.6"	"83.8"	""	"884"	"13"	"36.000"	"29.000"	"1.98802695862833"	"22"	"0.001872"	"0.01565"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTGWLDR"	"[R].iDTGWLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"602.82971"	"1204.65215"	"1204.65235"	"-0.17"	"-0.00010"	"7/66"	"7"	"66"	"1064645.31164551"	"HCD"	"MS2"	"53.49397"	"49.3"	"100.000"	"94.7770"	"33449"	"33449"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.1"	""	"59.5"	""	"59.7"	""	"89.0"	""	"79.7"	"100.7"	""	"867"	"18"	"36.000"	"29.000"	"0.619425531014563"	"22"	"0.00212"	"0.01951"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YADLPGIAR"	"[K].yADLPGIAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"602.84631"	"1204.68535"	"1204.68874"	"-2.81"	"-0.00169"	"13/64"	"13"	"64"	"2891591.7598877"	"HCD"	"MS2"	"34.14309"	"128.1"	"100.000"	"76.9388"	"26254"	"26254"	"26243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.2"	""	"148.0"	""	"173.4"	""	"212.1"	""	"265.7"	"256.1"	""	"798"	"33"	"36.000"	"29.000"	"0.0220278898273022"	"22"	"0.0001686"	"0.001048"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YADLPGIAR"	"[K].yADLPGIAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"602.84686"	"1204.68645"	"1204.68874"	"-1.90"	"-0.00114"	"7/64"	"7"	"64"	"3032722.42340088"	"HCD"	"MS2"	"14.57345"	"135.2"	"100.000"	"77.2298"	"26369"	"26369"	"26355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.5"	""	"160.2"	""	"167.3"	""	"230.5"	"0.0"	"289.9"	"277.9"	""	"763"	"32"	"35.000"	"28.000"	"0.0240156608760021"	"20"	"9.9E-05"	"0.0009657"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YADLPGIAR"	"[K].yADLPGIAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"602.84698"	"1204.68669"	"1204.68874"	"-1.70"	"-0.00102"	"13/64"	"13"	"64"	"2833113.36102295"	"HCD"	"MS2"	"9.512319"	"128.4"	"100.000"	"77.0066"	"26313"	"26313"	"26303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.3"	""	"172.0"	""	"166.3"	""	"213.6"	"3.0"	"258.8"	"243.5"	""	"764"	"33"	"35.000"	"28.000"	"0.0181578056310152"	"22"	"9.9E-05"	"0.0008569"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"602.84735"	"1204.68743"	"1204.68874"	"-1.09"	"-0.00066"	"7/74"	"7"	"74"	"1627289.61785889"	"HCD"	"MS2"	"13.48665"	"91.0"	"100.000"	"61.5683"	"20017"	"20017"	"19989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.1"	""	"111.0"	""	"114.3"	""	"146.2"	"0.6"	"174.5"	"182.9"	""	"772"	"25"	"35.000"	"28.000"	"0.131397561224586"	"21"	"0.001596"	"0.01297"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YADLPGIAR"	"[K].yADLPGIAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"602.84741"	"1204.68755"	"1204.68874"	"-0.99"	"-0.00060"	"13/64"	"13"	"64"	"3096732.02435303"	"HCD"	"MS2"	"20.29982"	"136.4"	"100.000"	"77.2830"	"26420"	"26420"	"26406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.8"	""	"160.5"	""	"169.6"	""	"238.3"	""	"274.1"	"282.5"	""	"772"	"34"	"35.000"	"28.000"	"0.0163150085106523"	"20"	"9.9E-05"	"0.0007809"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"602.84772"	"1204.68816"	"1204.68874"	"-0.48"	"-0.00029"	"5/74"	"5"	"74"	"1023843.58056641"	"HCD"	"MS2"	"17.07261"	"66.8"	"100.000"	"61.4406"	"20000"	"20000"	"19974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.2"	""	"71.9"	""	"87.3"	""	"111.8"	"1.2"	"139.1"	"138.0"	""	"761"	"23"	"35.000"	"28.000"	"0.194694938423087"	"21"	"0.004998"	"0.06341"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"602.84784"	"1204.68840"	"1204.68874"	"-0.28"	"-0.00017"	"6/74"	"6"	"74"	"2880652.67474365"	"HCD"	"MS2"	"12.67723"	"148.7"	"100.000"	"62.1659"	"20258"	"20258"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"197.6"	""	"172.2"	""	"196.5"	""	"242.8"	"2.4"	"286.7"	"312.9"	""	"764"	"27"	"35.000"	"28.000"	"0.0809213953664929"	"22"	"0.000264"	"0.006047"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"602.84790"	"1204.68852"	"1204.68874"	"-0.18"	"-0.00011"	"6/74"	"6"	"74"	"6134277.05853271"	"HCD"	"MS2"	"0"	"264.4"	"100.000"	"61.8463"	"20129"	"20129"	"20115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"380.8"	""	"292.6"	""	"360.2"	""	"441.8"	""	"524.9"	"510.8"	""	"751"	"36"	"35.000"	"28.000"	"0.0103183425448995"	""	"0.0001991"	"0.004218"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"602.84796"	"1204.68865"	"1204.68874"	"-0.08"	"-0.00005"	"6/74"	"6"	"74"	"3806271.9420166"	"HCD"	"MS2"	"7.493023"	"175.9"	"100.000"	"62.0377"	"20240"	"20240"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.6"	""	"199.1"	""	"234.8"	""	"313.3"	""	"335.5"	"330.1"	""	"751"	"37"	"35.000"	"28.000"	"0.00692803289901892"	"24"	"0.0001991"	"0.004398"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLEPSFR"	"[K].qVLEPSFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"602.84814"	"1204.68901"	"1204.68874"	"0.23"	"0.00014"	"6/74"	"6"	"74"	"6608390.49578857"	"HCD"	"MS2"	"0.4812437"	"293.3"	"100.000"	"61.7425"	"20120"	"20120"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"414.5"	""	"339.6"	""	"394.5"	""	"506.6"	""	"554.0"	"573.2"	""	"750"	"38"	"35.000"	"28.000"	"0.00633915349366224"	""	"0.0001991"	"0.005076"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"602.84998"	"1204.69267"	"1204.69377"	"-0.91"	"-0.00055"	"10/62"	"10"	"62"	"465948.892089844"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"28.4797"	"6606"	"6606"	"6581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"52.2"	""	"50.8"	""	"85.1"	"1.7"	"105.5"	"103.0"	""	"743"	"28"	"35.000"	"28.000"	"0.0558417240402443"	"22"	"0.0001991"	"0.005449"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.2121"	"0.0000"	"1"	"1"	"1"	"602.85016"	"1204.69304"	"1204.69377"	"-0.61"	"-0.00037"	"6/62"	"6"	"62"	"2410435.57037354"	"HCD"	"MS2"	"11.99455"	"188.6"	"100.000"	"27.9324"	"6428"	"6428"	"6408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"247.5"	""	"183.8"	""	"159.9"	""	"354.6"	""	"430.0"	"423.3"	""	"743"	"33"	"35.000"	"28.000"	"0.0177402125163832"	""	"0.001488"	"0.0123"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"602.85028"	"1204.69328"	"1204.69377"	"-0.41"	"-0.00024"	"10/62"	"10"	"62"	"471412.768249512"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"28.2515"	"6558"	"6558"	"6529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.8"	""	"50.4"	""	"45.7"	""	"78.6"	"1.7"	"101.8"	"92.4"	""	"763"	"28"	"35.000"	"28.000"	"0.061446130982051"	"22"	"0.001615"	"0.01423"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVANDAK"	"[R].eVANDAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"P15083"	"Polymeric immunoglobulin receptor OS=Rattus norvegicus OX=10116 GN=Pigr PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"602.85052"	"1204.69377"	"1204.69377"	"0.00"	"0.00000"	"12/62"	"12"	"62"	"2309541.91674805"	"HCD"	"MS2"	"0"	"192.6"	"100.000"	"28.1743"	"6483"	"6483"	"6465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.1"	""	"189.1"	""	"169.1"	""	"359.1"	""	"413.9"	"444.0"	""	"762"	"42"	"35.000"	"28.000"	"0.00231699435487192"	""	"0.0001991"	"0.004089"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].GPDSVFLIk.[E]"	"K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"602.86084"	"1204.71440"	"1204.71389"	"0.43"	"0.00026"	"6/66"	"6"	"66"	"625014.864074707"	"HCD"	"MS2"	"26.78212"	"35.0"	"100.000"	"94.6105"	"33416"	"33416"	"33403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.9"	""	"41.4"	""	"44.7"	""	"60.5"	""	"64.0"	"62.7"	""	"612"	"41"	"34.000"	"27.000"	"0.00235896461533716"	"23"	"0.00307"	"0.03336"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDSVFLIK"	"[R].GPDSVFLIk.[E]"	"K9(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"602.86096"	"1204.71465"	"1204.71389"	"0.63"	"0.00038"	"6/66"	"6"	"66"	"743900.979064941"	"HCD"	"MS2"	"53.41019"	"37.8"	"100.000"	"94.6803"	"33410"	"33410"	"33393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.8"	""	"50.9"	""	"51.0"	""	"67.6"	""	"66.0"	"56.7"	""	"614"	"41"	"34.000"	"27.000"	"0.00266770851790895"	"22"	"0.0001991"	"0.004887"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSAEAK"	"[K].lQSAEAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63538"	"Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"Q63538"	"Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"602.86829"	"1204.72930"	"1204.73016"	"-0.72"	"-0.00043"	"6/62"	"6"	"62"	"1711247.52697754"	"HCD"	"MS2"	"8.884454"	"135.0"	"100.000"	"36.8817"	"10033"	"10033"	"10010"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.9"	""	"172.9"	""	"167.8"	""	"214.9"	"4.1"	"240.5"	"263.1"	""	"455"	"34"	"33.000"	"26.000"	"0.00837493415036759"	"23"	"0.001488"	"0.01236"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQVDGK"	"[R].sIQVDGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"602.86829"	"1204.72930"	"1204.73016"	"-0.72"	"-0.00043"	"6/64"	"6"	"64"	"7728100.58752441"	"HCD"	"MS2"	"22.59961"	"542.0"	"100.000"	"45.9690"	"13687"	"13687"	"13669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"757.6"	""	"671.4"	""	"649.4"	""	"966.5"	""	"1068.2"	"1033.8"	""	"455"	"33"	"33.000"	"26.000"	"0.0123589450414529"	"25"	"0.002286"	"0.02155"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQVDGK"	"[R].sIQVDGk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"602.86829"	"1204.72930"	"1204.73016"	"-0.72"	"-0.00043"	"6/64"	"6"	"64"	"8477248.76379395"	"HCD"	"MS2"	"35.69683"	"540.3"	"100.000"	"45.6641"	"13597"	"13597"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"778.8"	""	"670.0"	""	"653.5"	""	"934.4"	""	"1055.4"	"1039.9"	""	"455"	"33"	"33.000"	"26.000"	"0.0124159913398264"	"22"	"0.002189"	"0.02119"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSAEAK"	"[K].lQSAEAk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63538"	"Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"Q63538"	"Mitogen-activated protein kinase 12 OS=Rattus norvegicus OX=10116 GN=Mapk12 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"602.86871"	"1204.73015"	"1204.73016"	"-0.01"	"0.00000"	"6/62"	"6"	"62"	"1885099.00280762"	"HCD"	"MS2"	"17.16387"	"151.8"	"100.000"	"37.0122"	"10049"	"10049"	"10020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.9"	""	"191.1"	""	"193.6"	""	"251.7"	"2.4"	"284.3"	"283.5"	""	"458"	"33"	"33.000"	"26.000"	"0.0117175140338731"	"23"	"0.001951"	"0.01723"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGTATPK"	"[K].aTGTATPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"602.86877"	"1204.73027"	"1204.73016"	"0.09"	"0.00006"	"6/64"	"6"	"64"	"4194840.56866455"	"HCD"	"MS2"	"5.107212"	"280.9"	"100.000"	"25.9768"	"5663"	"5663"	"5651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"352.1"	""	"441.0"	""	"505.0"	""	"422.2"	"2.5"	"589.5"	"347.0"	""	"458"	"37"	"33.000"	"26.000"	"0.00410994000544648"	"25"	"0.0001991"	"0.002013"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGTATPK"	"[K].aTGTATPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"602.86877"	"1204.73027"	"1204.73016"	"0.09"	"0.00006"	"6/64"	"6"	"64"	"4183934.61895752"	"HCD"	"MS2"	"6.469714"	"292.2"	"100.000"	"26.1557"	"5696"	"5696"	"5679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"361.5"	"3.8"	"472.8"	""	"540.4"	""	"445.5"	"1.1"	"590.3"	"349.9"	""	"458"	"37"	"33.000"	"26.000"	"0.00410994000544648"	"25"	"0.0001686"	"0.001941"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"402.54056"	"1205.60712"	"1205.61122"	"-3.40"	"-0.00137"	"12/74"	"12"	"74"	"2630734.45800781"	"HCD"	"MS2"	"37.6017"	"118.6"	"100.000"	"36.0876"	"9714"	"9714"	"9692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.8"	""	"166.6"	""	"150.5"	""	"187.5"	""	"243.5"	"218.5"	""	"532"	"38"	"34.000"	"27.000"	"0.00393442831252743"	""	"9.9E-05"	"0.000521"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5476"	"0.0000"	"1"	"1"	"1"	"402.54068"	"1205.60749"	"1205.61122"	"-3.09"	"-0.00124"	"12/74"	"12"	"74"	"2883437.89849854"	"HCD"	"MS2"	"31.72479"	"116.8"	"100.000"	"36.1744"	"9712"	"9712"	"9686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.7"	""	"149.1"	""	"169.1"	""	"178.3"	"0.9"	"229.1"	"217.1"	""	"522"	"42"	"34.000"	"27.000"	"0.00159823452240166"	""	"9.9E-05"	"0.000456"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"603.30859"	"1205.60991"	"1205.61122"	"-1.08"	"-0.00065"	"9/74"	"9"	"74"	"73449744.1357422"	"HCD"	"MS2"	"0.3520127"	"405.0"	"13.002"	"36.1313"	"9732"	"9732"	"9719"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"566.5"	""	"512.8"	""	"544.4"	""	"613.6"	""	"722.3"	"883.9"	""	"552"	"55"	"34.000"	"27.000"	"9.72543604077264E-05"	""	"0"	"7.859E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"603.30872"	"1205.61016"	"1205.61122"	"-0.88"	"-0.00053"	"7/74"	"7"	"74"	"4368420.35968018"	"HCD"	"MS2"	"8.671978"	"242.4"	"100.000"	"36.4039"	"9839"	"9839"	"9826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"346.0"	""	"291.0"	""	"290.0"	""	"400.6"	""	"461.6"	"512.0"	""	"552"	"51"	"34.000"	"27.000"	"0.00023329696126424"	"26"	"0"	"3.44E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"603.30884"	"1205.61040"	"1205.61122"	"-0.68"	"-0.00041"	"9/74"	"9"	"74"	"1547380.2901001"	"HCD"	"MS2"	"13.44734"	"111.8"	"100.000"	"36.6932"	"9956"	"9956"	"9936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.7"	""	"143.7"	""	"121.3"	""	"184.4"	""	"221.4"	"244.4"	""	"550"	"39"	"34.000"	"27.000"	"0.00376992485695335"	"24"	"0"	"6.457E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"603.30890"	"1205.61052"	"1205.61122"	"-0.58"	"-0.00035"	"8/74"	"8"	"74"	"1734631.94915771"	"HCD"	"MS2"	"9.086472"	"122.5"	"100.000"	"36.7779"	"9953"	"9953"	"9933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.2"	""	"160.5"	""	"142.1"	""	"207.4"	"1.9"	"236.9"	"245.2"	""	"551"	"47"	"34.000"	"27.000"	"0.000500174565093999"	"27"	"0"	"2.948E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"603.30896"	"1205.61064"	"1205.61122"	"-0.48"	"-0.00029"	"7/74"	"7"	"74"	"5503018.31500244"	"HCD"	"MS2"	"4.383656"	"269.2"	"100.000"	"36.4701"	"9830"	"9830"	"9818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"383.2"	""	"333.6"	""	"327.3"	""	"425.4"	""	"531.0"	"560.2"	""	"560"	"51"	"34.000"	"27.000"	"0.000221390015839951"	"26"	"0"	"3.426E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"603.30896"	"1205.61064"	"1205.61122"	"-0.48"	"-0.00029"	"9/74"	"9"	"74"	"90858078.9448242"	"HCD"	"MS2"	"0.3046139"	"494.5"	"12.750"	"36.2020"	"9723"	"9723"	"9714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"704.5"	""	"603.7"	""	"642.1"	""	"758.5"	"3.4"	"904.7"	"1072.7"	""	"560"	"52"	"34.000"	"27.000"	"0.000189739622130989"	""	"0"	"0.0001139"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"603.30957"	"1205.61186"	"1205.61122"	"0.54"	"0.00032"	"7/74"	"7"	"74"	"4782117.83001709"	"HCD"	"MS2"	"46.47155"	"263.1"	"100.000"	"35.8398"	"9613"	"9613"	"9586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"389.0"	""	"326.0"	""	"354.2"	""	"410.9"	""	"485.6"	"531.7"	""	"556"	"45"	"34.000"	"27.000"	"0.000859102130238777"	"25"	"0"	"7.148E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDDAPR"	"[K].aGFAGDDAPR.[A]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"603.30981"	"1205.61235"	"1205.61122"	"0.94"	"0.00057"	"8/74"	"8"	"74"	"2846027.87774658"	"HCD"	"MS2"	"57.98496"	"177.3"	"100.000"	"35.9359"	"9615"	"9615"	"9589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.8"	""	"222.6"	""	"236.0"	""	"278.7"	"0.5"	"330.6"	"358.0"	""	"576"	"33"	"34.000"	"27.000"	"0.0148385849639546"	""	"9.9E-05"	"0.0007059"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"603.32184"	"1205.63640"	"1205.63974"	"-2.77"	"-0.00167"	"6/60"	"6"	"60"	"2338412.5692749"	"HCD"	"MS2"	"44.76035"	"149.9"	"100.000"	"62.3489"	"20366"	"20366"	"20345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.7"	""	"183.6"	""	"195.4"	""	"238.4"	""	"312.1"	"297.1"	""	"728"	"36"	"35.000"	"28.000"	"0.00841591583623916"	""	"0.0001991"	"0.003307"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"603.32214"	"1205.63701"	"1205.63974"	"-2.26"	"-0.00136"	"6/60"	"6"	"60"	"2300165.56140137"	"HCD"	"MS2"	"44.31341"	"143.3"	"100.000"	"62.4080"	"20357"	"20357"	"20333"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.6"	""	"175.3"	""	"192.1"	""	"208.3"	""	"283.9"	"294.4"	""	"725"	"33"	"35.000"	"28.000"	"0.0200589414590704"	""	"0.0001991"	"0.002947"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"603.32288"	"1205.63848"	"1205.63974"	"-1.05"	"-0.00063"	"7/60"	"7"	"60"	"2928098.23077393"	"HCD"	"MS2"	"18.96502"	"165.8"	"100.000"	"62.6436"	"20486"	"20486"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.8"	""	"214.6"	""	"232.6"	""	"211.1"	"1.0"	"366.2"	"328.1"	""	"747"	"39"	"35.000"	"28.000"	"0.00480054567488941"	""	"0.0001991"	"0.003012"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLAEDELR"	"[R].mLAEDELR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"603.32324"	"1205.63921"	"1205.63974"	"-0.44"	"-0.00027"	"5/60"	"5"	"60"	"3203928.13031006"	"HCD"	"MS2"	"18.92015"	"183.7"	"100.000"	"62.6938"	"20473"	"20473"	"20456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.0"	""	"225.3"	""	"259.0"	""	"262.0"	""	"375.0"	"368.1"	""	"741"	"38"	"35.000"	"28.000"	"0.00602265814005554"	""	"0.0001686"	"0.001411"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLGSGGER"	"[K].lSTLGSGGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"603.33807"	"1205.66887"	"1205.66873"	"0.12"	"0.00007"	"9/86"	"9"	"86"	"2674084.24121094"	"HCD"	"MS2"	"43.17618"	"191.4"	"100.000"	"41.3414"	"11836"	"11836"	"11814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.8"	""	"233.0"	""	"277.9"	""	"301.3"	"0.5"	"385.7"	"352.6"	""	"752"	"34"	"35.000"	"28.000"	"0.0137463641646535"	"20"	"9.9E-05"	"0.0007215"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTLGSGGER"	"[K].lSTLGSGGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"603.33850"	"1205.66973"	"1205.66873"	"0.82"	"0.00050"	"9/86"	"9"	"86"	"2500532.66491699"	"HCD"	"MS2"	"48.15958"	"185.8"	"100.000"	"41.5065"	"11869"	"11869"	"11850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.1"	""	"211.2"	""	"286.8"	""	"297.1"	""	"354.5"	"359.6"	""	"753"	"35"	"35.000"	"28.000"	"0.0106356731055576"	"25"	"9.9E-05"	"0.0006024"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"603.34772"	"1205.68816"	"1205.68902"	"-0.72"	"-0.00043"	"7/70"	"7"	"70"	"16228924.3482056"	"HCD"	"MS2"	"0"	"1146.9"	"100.000"	"25.6352"	"5485"	"5485"	"5462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1697.9"	""	"1281.4"	""	"1406.8"	""	"2171.8"	""	"2245.0"	"2081.1"	""	"737"	"39"	"35.000"	"28.000"	"0.00480216957859672"	""	"0.0001991"	"0.002086"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"603.34784"	"1205.68840"	"1205.68902"	"-0.51"	"-0.00031"	"7/70"	"7"	"70"	"18482217.0577393"	"HCD"	"MS2"	"0"	"1353.2"	"100.000"	"25.4840"	"5462"	"5462"	"5442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2031.0"	""	"1499.8"	""	"1648.1"	""	"2525.3"	""	"2621.6"	"2508.0"	""	"761"	"39"	"35.000"	"28.000"	"0.00510922067712957"	""	"0.0001991"	"0.004354"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"603.34802"	"1205.68877"	"1205.68902"	"-0.21"	"-0.00013"	"12/70"	"12"	"70"	"6213209.27575684"	"HCD"	"MS2"	"0"	"460.2"	"100.000"	"25.9241"	"5602"	"5602"	"5587"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"641.1"	""	"506.2"	""	"574.6"	""	"843.2"	""	"932.2"	"870.5"	""	"763"	"40"	"35.000"	"28.000"	"0.00406906420249343"	""	"0.0001991"	"0.002769"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVAGDSK"	"[R].gNVAGDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"603.34814"	"1205.68901"	"1205.68902"	"-0.01"	"0.00000"	"7/70"	"7"	"70"	"5287871.16668701"	"HCD"	"MS2"	"0"	"391.2"	"100.000"	"25.7752"	"5581"	"5581"	"5562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"543.2"	""	"414.0"	""	"504.9"	""	"697.9"	""	"787.8"	"766.0"	""	"749"	"39"	"35.000"	"28.000"	"0.00491418862182692"	""	"0.0001686"	"0.001226"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPGQYIR"	"[K].sRPGQYIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"402.56943"	"1205.69373"	"1205.69522"	"-1.24"	"-0.00050"	"6/68"	"6"	"68"	"2644355.66491699"	"HCD"	"MS2"	"67.27217"	"197.5"	"100.000"	"22.1211"	"4150"	"4150"	"4140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.3"	""	"242.7"	""	"227.0"	""	"334.1"	"1.0"	"408.6"	"407.3"	""	"696"	"15"	"35.000"	"28.000"	"1.10810073756069"	"15"	"0.004819"	"0.05768"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPGQYIR"	"[K].sRPGQYIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"402.56952"	"1205.69400"	"1205.69522"	"-1.01"	"-0.00041"	"11/68"	"11"	"68"	"2770458.68164063"	"HCD"	"MS2"	"43.21099"	"198.1"	"100.000"	"22.2717"	"4167"	"4167"	"4159"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.3"	""	"226.2"	""	"228.0"	""	"350.9"	"0.6"	"393.8"	"440.3"	""	"696"	"16"	"35.000"	"28.000"	"0.969570166683159"	"16"	"0.004959"	"0.06216"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPGQYIR"	"[K].sRPGQYIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"402.56958"	"1205.69419"	"1205.69522"	"-0.86"	"-0.00034"	"6/68"	"6"	"68"	"3087834.67034912"	"HCD"	"MS2"	"49.1228"	"264.3"	"100.000"	"22.3765"	"4244"	"4244"	"4238"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.0"	""	"291.9"	""	"314.0"	""	"466.6"	""	"571.6"	"605.2"	""	"691"	"11"	"35.000"	"28.000"	"2.79542633166131"	"13"	"0.007752"	"0.0991"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].QLFDQVVk.[T]"	"K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"603.35858"	"1205.70989"	"1205.70914"	"0.62"	"0.00037"	"6/70"	"6"	"70"	"910011.106811523"	"HCD"	"MS2"	"22.04831"	"50.8"	"100.000"	"73.2044"	"24738"	"24738"	"24714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.5"	""	"60.2"	""	"58.3"	""	"93.1"	""	"106.8"	"108.9"	""	"653"	"38"	"35.000"	"28.000"	"0.00481818183114579"	"21"	"0.002189"	"0.02014"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFDQVVK"	"[K].QLFDQVVk.[T]"	"K8(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"603.35870"	"1205.71013"	"1205.70914"	"0.82"	"0.00050"	"6/70"	"6"	"70"	"923633.307739258"	"HCD"	"MS2"	"39.02407"	"51.7"	"100.000"	"73.3116"	"24811"	"24811"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.1"	""	"61.7"	""	"66.4"	""	"101.8"	""	"106.2"	"103.2"	""	"653"	"41"	"35.000"	"28.000"	"0.00258156572041943"	"21"	"0.001951"	"0.01625"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"402.57559"	"1205.71222"	"1205.71417"	"-1.62"	"-0.00065"	"8/54"	"8"	"54"	"3862977.54663086"	"HCD"	"MS2"	"8.140225"	"192.3"	"100.000"	"46.8320"	"14068"	"14068"	"14049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.1"	""	"119.9"	""	"161.8"	""	"416.7"	""	"537.5"	"483.7"	""	"634"	"25"	"35.000"	"28.000"	"0.0961743505389585"	"22"	"0.00307"	"0.0331"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"603.35992"	"1205.71257"	"1205.71417"	"-1.33"	"-0.00080"	"6/54"	"6"	"54"	"1237341.3338623"	"HCD"	"MS2"	"47.67466"	"110.7"	"100.000"	"58.5238"	"18781"	"18781"	"18750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.4"	""	"120.7"	""	"127.1"	""	"232.7"	""	"221.4"	"234.3"	""	"644"	"26"	"35.000"	"28.000"	"0.087268170546885"	""	"0.001488"	"0.01213"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.35992"	"1205.71257"	"1205.71417"	"-1.33"	"-0.00080"	"6/54"	"6"	"54"	"6260733.58740234"	"HCD"	"MS2"	"0"	"476.6"	"100.000"	"50.7891"	"15641"	"15641"	"15621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.7"	""	"101.6"	""	"252.7"	""	"397.0"	""	"2808.3"	"959.4"	""	"644"	"37"	"35.000"	"28.000"	"0.00655927549021241"	""	"0.001615"	"0.0134"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"603.35992"	"1205.71257"	"1205.71417"	"-1.33"	"-0.00080"	"9/54"	"9"	"54"	"3906556.20233154"	"HCD"	"MS2"	"45.26938"	"216.3"	"100.000"	"49.0023"	"14913"	"14913"	"14903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.9"	"3.2"	"174.0"	""	"198.6"	""	"467.7"	""	"536.9"	"506.8"	""	"644"	"22"	"35.000"	"28.000"	"0.19092195451476"	"24"	"0.00307"	"0.03427"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"402.57571"	"1205.71259"	"1205.71417"	"-1.31"	"-0.00053"	"9/54"	"9"	"54"	"5081985.45898438"	"HCD"	"MS2"	"10.57786"	"256.2"	"100.000"	"47.1149"	"14145"	"14145"	"14132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.5"	""	"158.0"	""	"203.8"	""	"554.0"	""	"715.4"	"652.7"	""	"644"	"26"	"35.000"	"28.000"	"0.0866674206864466"	"22"	"0.007412"	"0.09427"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"402.57574"	"1205.71268"	"1205.71417"	"-1.24"	"-0.00050"	"8/54"	"8"	"54"	"11665348.1580811"	"HCD"	"MS2"	"5.114604"	"471.8"	"83.862"	"46.5223"	"13942"	"13942"	"13928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"297.5"	""	"298.7"	"2.7"	"357.9"	""	"1067.1"	""	"1285.6"	"1205.1"	""	"644"	"26"	"35.000"	"28.000"	"0.0727538318011154"	"24"	"0.006577"	"0.08161"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.35999"	"1205.71269"	"1205.71417"	"-1.23"	"-0.00074"	"6/54"	"6"	"54"	"5254533.60656738"	"HCD"	"MS2"	"2.759602"	"408.1"	"100.000"	"50.0910"	"15391"	"15391"	"15371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.5"	""	"97.2"	""	"222.5"	""	"367.7"	""	"2390.7"	"816.8"	""	"644"	"37"	"35.000"	"28.000"	"0.00693195718581247"	""	"0.002525"	"0.02479"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"402.57578"	"1205.71277"	"1205.71417"	"-1.16"	"-0.00047"	"8/54"	"8"	"54"	"14957013.2969971"	"HCD"	"MS2"	"5.110779"	"683.0"	"100.000"	"45.9289"	"13705"	"13705"	"13685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"483.6"	""	"409.5"	""	"528.5"	""	"1650.6"	""	"1805.2"	"1644.7"	""	"644"	"20"	"35.000"	"28.000"	"0.31978336759154"	"20"	"0.006958"	"0.08722"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"603.36005"	"1205.71282"	"1205.71417"	"-1.13"	"-0.00068"	"6/54"	"6"	"54"	"2950287.69274902"	"HCD"	"MS2"	"25.41073"	"216.1"	"100.000"	"48.8970"	"14905"	"14905"	"14890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.2"	""	"175.8"	""	"202.7"	""	"460.6"	""	"524.2"	"515.7"	""	"644"	"36"	"35.000"	"28.000"	"0.0073089648230659"	""	"0.001615"	"0.01319"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"402.57581"	"1205.71286"	"1205.71417"	"-1.09"	"-0.00044"	"8/54"	"8"	"54"	"11676406.6141968"	"HCD"	"MS2"	"14.38593"	"555.1"	"100.000"	"46.2105"	"13786"	"13786"	"13761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"427.3"	""	"349.3"	""	"418.3"	""	"1352.3"	""	"1434.5"	"1325.9"	""	"644"	"26"	"35.000"	"28.000"	"0.0725865026313082"	"24"	"0.002525"	"0.02372"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.36011"	"1205.71294"	"1205.71417"	"-1.02"	"-0.00062"	"6/54"	"6"	"54"	"6733902.99206543"	"HCD"	"MS2"	"0"	"457.6"	"100.000"	"47.9660"	"14530"	"14530"	"14517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"319.5"	""	"321.1"	""	"410.0"	""	"1004.8"	""	"1174.4"	"1141.8"	""	"622"	"37"	"34.000"	"27.000"	"0.00562031153189398"	""	"0.001488"	"0.01204"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"402.57584"	"1205.71296"	"1205.71417"	"-1.01"	"-0.00041"	"8/54"	"8"	"54"	"14672769.5053711"	"HCD"	"MS2"	"3.758041"	"706.7"	"100.000"	"46.5122"	"13904"	"13904"	"13900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"452.0"	""	"397.6"	""	"585.4"	""	"1661.2"	""	"1851.2"	"1812.1"	""	"622"	"25"	"34.000"	"27.000"	"0.0915715128111414"	"22"	"0.005426"	"0.06924"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGITEK"	"[R].eAGITEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"3"	"603.36017"	"1205.71306"	"1205.71417"	"-0.92"	"-0.00056"	"6/58"	"6"	"58"	"12472669.8530884"	"HCD"	"MS2"	"8.810181"	"872.9"	"100.000"	"37.2902"	"10163"	"10163"	"10147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1410.9"	""	"978.2"	""	"1162.9"	""	"1395.3"	""	"1527.5"	"1797.4"	""	"622"	"40"	"34.000"	"27.000"	"0.00299750826347055"	""	"0.002834"	"0.02998"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36023"	"1205.71318"	"1205.71417"	"-0.82"	"-0.00050"	"6/54"	"6"	"54"	"4213382.84759521"	"HCD"	"MS2"	"0"	"297.0"	"100.000"	"48.2410"	"14641"	"14641"	"14632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.7"	""	"188.7"	""	"250.7"	""	"694.4"	""	"755.5"	"733.5"	""	"612"	"37"	"34.000"	"27.000"	"0.0061336844037374"	""	"0.001951"	"0.01705"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"603.36029"	"1205.71330"	"1205.71417"	"-0.72"	"-0.00043"	"5/54"	"5"	"54"	"2250164.80419922"	"HCD"	"MS2"	"45.7301"	"185.6"	"100.000"	"50.1698"	"15388"	"15388"	"15369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.1"	""	"180.3"	""	"199.8"	""	"362.2"	""	"441.3"	"394.5"	""	"612"	"22"	"34.000"	"27.000"	"0.189548968973495"	""	"0.002875"	"0.03123"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"603.36029"	"1205.71330"	"1205.71417"	"-0.72"	"-0.00043"	"12/54"	"12"	"54"	"4165937.27825928"	"HCD"	"MS2"	"31.97873"	"303.0"	"100.000"	"40.1592"	"11360"	"11360"	"11341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"471.4"	""	"342.0"	""	"377.9"	""	"460.7"	""	"604.3"	"621.8"	""	"612"	"42"	"34.000"	"27.000"	"0.0019396413164462"	"27"	"0.000885"	"0.007772"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"603.36029"	"1205.71330"	"1205.71417"	"-0.72"	"-0.00043"	"6/54"	"6"	"54"	"3666934.85473633"	"HCD"	"MS2"	"45.99319"	"252.4"	"100.000"	"40.2066"	"11345"	"11345"	"11327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"356.1"	""	"287.1"	""	"281.4"	""	"393.6"	""	"549.1"	"533.5"	""	"612"	"38"	"34.000"	"27.000"	"0.00469592796736584"	"26"	"0.002189"	"0.02102"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"603.36035"	"1205.71343"	"1205.71417"	"-0.62"	"-0.00037"	"10/54"	"10"	"54"	"711579.520812988"	"HCD"	"MS2"	"0"	"69.9"	"100.000"	"56.0057"	"17793"	"17793"	"17772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.4"	""	"73.0"	""	"85.0"	""	"131.7"	""	"146.6"	"153.0"	""	"612"	"26"	"34.000"	"27.000"	"0.0835067201539261"	""	"0.006033"	"0.07337"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"603.36035"	"1205.71343"	"1205.71417"	"-0.62"	"-0.00037"	"6/54"	"6"	"54"	"5711081.79211426"	"HCD"	"MS2"	"0"	"391.0"	"100.000"	"40.4607"	"11483"	"11483"	"11464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"616.1"	""	"527.7"	""	"566.1"	""	"555.2"	""	"718.5"	"722.1"	""	"612"	"29"	"34.000"	"27.000"	"0.0427288718483117"	""	"0.005832"	"0.07182"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"603.36035"	"1205.71343"	"1205.71417"	"-0.62"	"-0.00037"	"6/54"	"6"	"54"	"7911616.14874268"	"HCD"	"MS2"	"0"	"601.3"	"100.000"	"50.3784"	"15509"	"15509"	"15492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.1"	""	"100.2"	""	"274.1"	""	"443.6"	""	"3744.5"	"1189.8"	""	"612"	"35"	"34.000"	"27.000"	"0.00900993019942421"	""	"0.002588"	"0.02691"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"603.36035"	"1205.71343"	"1205.71417"	"-0.62"	"-0.00037"	"9/54"	"9"	"54"	"4236122.27008057"	"HCD"	"MS2"	"45.29721"	"226.2"	"100.000"	"48.6173"	"14793"	"14793"	"14776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.7"	""	"177.8"	""	"208.3"	""	"475.3"	""	"564.8"	"547.5"	""	"612"	"23"	"34.000"	"27.000"	"0.141488592548174"	"25"	"0.002559"	"0.02575"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"603.36041"	"1205.71355"	"1205.71417"	"-0.52"	"-0.00031"	"7/54"	"7"	"54"	"138091.38079834"	"HCD"	"MS2"	"31.49613"	"9.9"	"100.000"	"116.9471"	"42061"	"42061"	"42053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"10.1"	""	"8.7"	""	"22.2"	""	"20.2"	"22.9"	""	"612"	"18"	"34.000"	"27.000"	"0.542901981152391"	"24"	"0.008893"	"0.113"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"603.36041"	"1205.71355"	"1205.71417"	"-0.52"	"-0.00031"	"10/54"	"10"	"54"	"145601.484008789"	"HCD"	"MS2"	"14.0279"	"9.5"	"100.000"	"118.3703"	"42334"	"42334"	"42331"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"7.2"	""	"6.2"	""	"23.8"	"1.2"	"22.2"	"23.0"	""	"612"	"21"	"34.000"	"27.000"	"0.229996605569571"	"24"	"0.006656"	"0.08293"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"603.36041"	"1205.71355"	"1205.71417"	"-0.52"	"-0.00031"	"5/54"	"5"	"54"	"703285.180419922"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"56.3601"	"17902"	"17902"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.0"	""	"77.6"	""	"82.4"	""	"126.8"	""	"156.7"	"147.6"	""	"612"	"22"	"34.000"	"27.000"	"0.173269222445706"	"25"	"0.008868"	"0.1126"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"603.36047"	"1205.71367"	"1205.71417"	"-0.42"	"-0.00025"	"6/54"	"6"	"54"	"2694950.77966309"	"HCD"	"MS2"	"16.96392"	"195.5"	"100.000"	"49.3837"	"15068"	"15068"	"15052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.4"	""	"158.4"	""	"184.0"	""	"406.7"	""	"505.5"	"444.8"	""	"612"	"37"	"34.000"	"27.000"	"0.00652711743422853"	""	"0.001348"	"0.01083"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36047"	"1205.71367"	"1205.71417"	"-0.42"	"-0.00025"	"6/54"	"6"	"54"	"34035798.1506348"	"HCD"	"MS2"	"0"	"645.9"	"28.334"	"47.1010"	"14178"	"14178"	"14161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.1"	""	"395.4"	""	"510.9"	""	"1435.7"	""	"1722.4"	"1705.5"	""	"612"	"37"	"34.000"	"27.000"	"0.00556828462734655"	""	"0.002628"	"0.02766"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEELSK"	"[R].aAEELSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"603.36047"	"1205.71367"	"1205.71417"	"-0.42"	"-0.00025"	"6/54"	"6"	"54"	"6166143.16015625"	"HCD"	"MS2"	"0"	"443.8"	"100.000"	"40.8172"	"11628"	"11628"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"681.4"	""	"574.6"	""	"625.6"	""	"688.2"	""	"761.5"	"882.0"	""	"612"	"27"	"34.000"	"27.000"	"0.0589822623436427"	""	"0.005997"	"0.07301"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"402.57611"	"1205.71378"	"1205.71417"	"-0.33"	"-0.00013"	"8/54"	"8"	"54"	"13074470.5683594"	"HCD"	"MS2"	"2.661232"	"623.6"	"100.000"	"46.2152"	"13821"	"13821"	"13811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"394.0"	""	"385.7"	""	"525.6"	""	"1419.0"	""	"1661.7"	"1577.8"	""	"612"	"22"	"34.000"	"27.000"	"0.184808280589172"	"20"	"0.005997"	"0.073"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"603.36053"	"1205.71379"	"1205.71417"	"-0.32"	"-0.00019"	"5/54"	"5"	"54"	"2531475.69915771"	"HCD"	"MS2"	"48.33989"	"221.8"	"100.000"	"49.7889"	"15268"	"15268"	"15244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.5"	""	"235.1"	""	"233.9"	""	"451.6"	""	"484.0"	"468.6"	""	"612"	"21"	"34.000"	"27.000"	"0.269600955140452"	"27"	"0.004158"	"0.04508"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.36053"	"1205.71379"	"1205.71417"	"-0.32"	"-0.00019"	"6/54"	"6"	"54"	"7268131.58209229"	"HCD"	"MS2"	"0"	"571.7"	"100.000"	"50.4760"	"15513"	"15513"	"15494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"88.1"	""	"268.5"	""	"431.0"	""	"3597.7"	"1127.8"	""	"612"	"37"	"34.000"	"27.000"	"0.00652711743422853"	""	"0.002166"	"0.01989"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"603.36053"	"1205.71379"	"1205.71417"	"-0.32"	"-0.00019"	"6/54"	"6"	"54"	"4159555.28009033"	"HCD"	"MS2"	"11.63982"	"253.3"	"100.000"	"48.7038"	"14792"	"14792"	"14771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.7"	""	"181.7"	""	"233.2"	""	"584.3"	""	"609.4"	"615.1"	""	"612"	"36"	"34.000"	"27.000"	"0.00689797198918644"	""	"0.00192"	"0.01614"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"603.36060"	"1205.71391"	"1205.71417"	"-0.22"	"-0.00013"	"10/54"	"10"	"54"	"2333089.40917969"	"HCD"	"MS2"	"8.900269"	"190.7"	"100.000"	"58.8325"	"18906"	"18906"	"18885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.9"	""	"165.4"	""	"192.3"	""	"427.1"	""	"421.5"	"424.1"	""	"612"	"24"	"34.000"	"27.000"	"0.113951862113898"	"27"	"0.002525"	"0.02364"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"603.36060"	"1205.71391"	"1205.71417"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"21982440.3233643"	"HCD"	"MS2"	"0"	"669.8"	"46.347"	"47.5036"	"14304"	"14304"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"421.6"	""	"467.4"	""	"525.0"	""	"1519.7"	""	"1769.1"	"1708.7"	""	"612"	"36"	"34.000"	"27.000"	"0.00812309301964516"	""	"0.002799"	"0.02974"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEATK"	"[R].aLDEATk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"603.36060"	"1205.71391"	"1205.71417"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"5823257.37908936"	"HCD"	"MS2"	"1.948515"	"404.5"	"100.000"	"40.4850"	"11459"	"11459"	"11448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"635.2"	""	"539.1"	""	"566.7"	""	"604.0"	""	"731.4"	"758.3"	""	"612"	"39"	"34.000"	"27.000"	"0.00400609668437819"	""	"0.003001"	"0.03226"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"603.36060"	"1205.71391"	"1205.71417"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"10380921.5494995"	"HCD"	"MS2"	"0.394812"	"644.2"	"92.707"	"48.0927"	"14543"	"14543"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"469.0"	""	"450.6"	""	"541.4"	""	"1410.4"	""	"1653.2"	"1634.9"	""	"612"	"37"	"34.000"	"27.000"	"0.00559398666139679"	""	"0.002525"	"0.02382"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"6/54"	"6"	"54"	"2218962.26837158"	"HCD"	"MS2"	"5.890386"	"174.6"	"100.000"	"58.6344"	"18861"	"18861"	"18839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.5"	""	"152.4"	""	"162.7"	""	"387.7"	""	"396.7"	"389.7"	""	"612"	"26"	"34.000"	"27.000"	"0.0838921696609932"	""	"0.001999"	"0.01761"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36066"	"1205.71404"	"1205.71417"	"-0.11"	"-0.00007"	"6/54"	"6"	"54"	"4899201.54412842"	"HCD"	"MS2"	"3.84463"	"354.9"	"100.000"	"48.3870"	"14664"	"14664"	"14647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"264.7"	""	"225.5"	""	"310.0"	""	"777.3"	""	"934.0"	"879.2"	""	"612"	"37"	"34.000"	"27.000"	"0.00607745044711356"	""	"0.002035"	"0.01782"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"603.36072"	"1205.71416"	"1205.71417"	"-0.01"	"-0.00001"	"5/54"	"5"	"54"	"136759.126708984"	"HCD"	"MS2"	"31.9318"	"9.6"	"100.000"	"117.2299"	"42127"	"42127"	"42125"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.4"	""	"8.4"	""	"9.6"	""	"23.9"	""	"22.3"	"19.2"	""	"612"	"19"	"34.000"	"27.000"	"0.352144919016997"	"22"	"0.006958"	"0.08739"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGITEK"	"[R].eAGITEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"3"	"603.36072"	"1205.71416"	"1205.71417"	"-0.01"	"-0.00001"	"6/58"	"6"	"58"	"12279419.3339233"	"HCD"	"MS2"	"6.733831"	"820.7"	"95.248"	"37.1896"	"10159"	"10159"	"10147"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1352.3"	""	"924.1"	""	"1063.0"	""	"1317.7"	"8.8"	"1430.1"	"1677.9"	""	"612"	"40"	"34.000"	"27.000"	"0.00290216049770075"	""	"0.001615"	"0.01339"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDEAVK"	"[K].vSDEAVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"603.36078"	"1205.71428"	"1205.71417"	"0.09"	"0.00005"	"6/52"	"6"	"52"	"1416940.75640869"	"HCD"	"MS2"	"8.492035"	"120.6"	"100.000"	"38.6474"	"10751"	"10751"	"10723"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.4"	""	"133.9"	""	"162.2"	""	"197.3"	"1.6"	"248.1"	"245.5"	""	"611"	"23"	"34.000"	"27.000"	"0.166729026563383"	""	"0.002286"	"0.02151"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDEAVK"	"[K].vSDEAVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"P35815"	"Protein phosphatase 1B OS=Rattus norvegicus OX=10116 GN=Ppm1b PE=2 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"603.36078"	"1205.71428"	"1205.71417"	"0.09"	"0.00005"	"12/52"	"12"	"52"	"1987337.51489258"	"HCD"	"MS2"	"7.743425"	"156.9"	"100.000"	"38.6038"	"10697"	"10697"	"10670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.7"	""	"170.6"	""	"191.1"	""	"276.3"	""	"318.5"	"330.6"	""	"611"	"37"	"34.000"	"27.000"	"0.00544516713455391"	""	"0.001049"	"0.0087"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"603.36078"	"1205.71428"	"1205.71417"	"0.09"	"0.00005"	"6/54"	"6"	"54"	"12897250.0178223"	"HCD"	"MS2"	"0.7656276"	"807.2"	"100.000"	"47.3724"	"14288"	"14288"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"533.5"	""	"717.0"	""	"618.6"	""	"1651.8"	""	"2192.7"	"1998.2"	""	"611"	"37"	"34.000"	"27.000"	"0.00570178995549992"	""	"0.002525"	"0.02381"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"603.36084"	"1205.71440"	"1205.71417"	"0.19"	"0.00011"	"5/54"	"5"	"54"	"1248245.23345947"	"HCD"	"MS2"	"22.53473"	"107.2"	"100.000"	"58.3004"	"18725"	"18725"	"18699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"108.7"	""	"117.6"	""	"237.3"	""	"241.2"	"224.5"	""	"610"	"28"	"34.000"	"27.000"	"0.0500379880825859"	""	"0.001348"	"0.01071"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"603.36096"	"1205.71465"	"1205.71417"	"0.39"	"0.00024"	"6/54"	"6"	"54"	"2624043.84002686"	"HCD"	"MS2"	"14.13064"	"201.2"	"100.000"	"49.1910"	"15024"	"15024"	"15006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.8"	""	"169.6"	""	"192.5"	""	"413.1"	"0.1"	"483.7"	"479.1"	""	"610"	"35"	"34.000"	"27.000"	"0.00962276410129262"	""	"0.001615"	"0.01393"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"603.36108"	"1205.71489"	"1205.71417"	"0.59"	"0.00036"	"6/54"	"6"	"54"	"326986164.365234"	"HCD"	"MS2"	"0.04071034"	"686.2"	"3.149"	"46.8227"	"14065"	"14065"	"14049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.2"	""	"394.0"	""	"554.4"	""	"1559.1"	"3.0"	"1836.8"	"1774.2"	""	"612"	"37"	"34.000"	"27.000"	"0.00561980733064594"	""	"0.007412"	"0.09404"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"603.36121"	"1205.71514"	"1205.71417"	"0.80"	"0.00048"	"5/54"	"5"	"54"	"1102962.81616211"	"HCD"	"MS2"	"29.94307"	"106.8"	"100.000"	"58.9498"	"18989"	"18989"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.4"	""	"98.5"	""	"119.4"	""	"214.2"	""	"238.4"	"226.1"	""	"612"	"20"	"34.000"	"27.000"	"0.277793082234525"	"26"	"0.002084"	"0.01869"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"603.36127"	"1205.71526"	"1205.71417"	"0.90"	"0.00054"	"6/54"	"6"	"54"	"641383.527587891"	"HCD"	"MS2"	"29.08914"	"56.1"	"100.000"	"61.3738"	"19973"	"19973"	"19946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.8"	""	"59.3"	""	"67.8"	""	"109.2"	""	"123.4"	"110.6"	""	"612"	"16"	"34.000"	"27.000"	"0.699393233832882"	"23"	"0.001615"	"0.01367"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"603.36133"	"1205.71538"	"1205.71417"	"1.00"	"0.00060"	"5/54"	"5"	"54"	"1363762.06726074"	"HCD"	"MS2"	"31.16581"	"125.5"	"100.000"	"59.1317"	"19028"	"19028"	"19006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.6"	""	"131.9"	""	"134.6"	""	"255.7"	""	"292.5"	"266.6"	""	"610"	"21"	"34.000"	"27.000"	"0.234045254255355"	""	"0.002755"	"0.02924"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"603.36139"	"1205.71550"	"1205.71417"	"1.10"	"0.00066"	"6/54"	"6"	"54"	"111309851.160645"	"HCD"	"MS2"	"0"	"1755.2"	"26.382"	"46.1509"	"13762"	"13762"	"13745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1300.2"	""	"1152.7"	""	"1389.5"	""	"4406.9"	""	"4385.9"	"4261.0"	""	"606"	"36"	"34.000"	"27.000"	"0.0084419471409482"	""	"0.005871"	"0.07266"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4595"	"0.0000"	"1"	"1"	"1"	"603.36145"	"1205.71562"	"1205.71417"	"1.20"	"0.00072"	"6/54"	"6"	"54"	"175448709.883789"	"HCD"	"MS2"	"0.09093862"	"577.9"	"5.000"	"47.2161"	"14187"	"14187"	"14172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"343.4"	""	"342.0"	""	"444.7"	""	"1330.9"	""	"1548.9"	"1521.6"	""	"606"	"37"	"34.000"	"27.000"	"0.00556471118034549"	""	"0.0065"	"0.08071"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDK"	"[M].vLSADDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"603.36267"	"1205.71807"	"1205.71417"	"3.23"	"0.00195"	"6/54"	"6"	"54"	"87131515.4106445"	"HCD"	"MS2"	"0.4229887"	"2218.6"	"36.529"	"45.8414"	"13670"	"13670"	"13653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1677.7"	""	"1520.4"	""	"1773.4"	""	"5449.3"	""	"5596.7"	"5337.9"	""	"546"	"37"	"34.000"	"27.000"	"0.00582321261289015"	""	"0.006613"	"0.08274"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESALK"	"[K].sLESALk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"603.37805"	"1205.74883"	"1205.75056"	"-1.44"	"-0.00087"	"6/54"	"6"	"54"	"927548.306640625"	"HCD"	"MS2"	"59.15587"	"84.6"	"100.000"	"63.4729"	"20823"	"20823"	"20798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.9"	""	"110.2"	""	"104.0"	""	"152.2"	""	"151.0"	"164.1"	""	"336"	"32"	"32.000"	"25.000"	"0.0108970584836104"	"24"	"0.001348"	"0.01148"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"603.37805"	"1205.74883"	"1205.75056"	"-1.44"	"-0.00087"	"12/54"	"12"	"54"	"13915299.2838135"	"HCD"	"MS2"	"2.381407"	"254.2"	"42.513"	"52.1663"	"16197"	"16197"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"376.4"	""	"386.6"	""	"312.9"	""	"399.7"	""	"502.3"	"434.9"	""	"336"	"41"	"32.000"	"25.000"	"0.00128916730212786"	""	"0.001103"	"0.008954"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"402.58780"	"1205.74884"	"1205.75056"	"-1.42"	"-0.00057"	"5/54"	"5"	"54"	"17604878.5646973"	"HCD"	"MS2"	"3.651927"	"570.3"	"51.974"	"51.2493"	"15863"	"15863"	"15848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"954.0"	""	"1007.7"	""	"758.7"	""	"857.9"	""	"1002.9"	"813.0"	""	"336"	"32"	"32.000"	"25.000"	"0.0102166680214825"	"24"	"0.001615"	"0.01313"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"402.58792"	"1205.74921"	"1205.75056"	"-1.12"	"-0.00045"	"5/54"	"5"	"54"	"3099989.23614502"	"HCD"	"MS2"	"16.51867"	"200.2"	"100.000"	"51.2512"	"15830"	"15830"	"15805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.8"	""	"335.8"	""	"268.8"	""	"306.1"	""	"328.8"	"299.6"	""	"344"	"30"	"32.000"	"25.000"	"0.01881604949988"	"23"	"0.009312"	"0.121"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"402.58798"	"1205.74939"	"1205.75056"	"-0.97"	"-0.00039"	"5/54"	"5"	"54"	"6507613.00750732"	"HCD"	"MS2"	"5.184419"	"447.9"	"100.000"	"51.8322"	"16061"	"16061"	"16044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"696.0"	""	"759.8"	""	"632.4"	""	"671.6"	""	"781.3"	"698.5"	""	"334"	"36"	"32.000"	"25.000"	"0.00416597319399474"	"25"	"0.001488"	"0.01263"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLESALK"	"[K].sLESALk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"603.37836"	"1205.74944"	"1205.75056"	"-0.93"	"-0.00056"	"6/54"	"6"	"54"	"874392.529968262"	"HCD"	"MS2"	"46.55427"	"79.5"	"100.000"	"63.4905"	"20798"	"20798"	"20779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.7"	""	"104.8"	""	"93.2"	""	"138.1"	""	"147.0"	"159.5"	""	"334"	"25"	"32.000"	"25.000"	"0.0567174205225982"	"25"	"0.001261"	"0.009548"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"603.37836"	"1205.74944"	"1205.75056"	"-0.93"	"-0.00056"	"6/54"	"6"	"54"	"1522625.14855957"	"HCD"	"MS2"	"24.24718"	"135.9"	"100.000"	"55.0310"	"17400"	"17400"	"17378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.2"	""	"115.7"	""	"148.8"	""	"211.2"	""	"434.0"	"264.3"	""	"334"	"34"	"32.000"	"25.000"	"0.00705856585823557"	""	"0.001348"	"0.01092"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"402.58801"	"1205.74948"	"1205.75056"	"-0.89"	"-0.00036"	"5/54"	"5"	"54"	"4319869.93182373"	"HCD"	"MS2"	"6.229892"	"265.1"	"100.000"	"51.5628"	"15986"	"15986"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"423.3"	""	"429.6"	""	"356.9"	""	"396.1"	"0.1"	"462.1"	"440.0"	""	"326"	"36"	"32.000"	"25.000"	"0.00406618940491701"	""	"0.003529"	"0.03897"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSGTIK"	"[R].eLSGTIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"P23358"	"60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"603.37842"	"1205.74956"	"1205.75056"	"-0.83"	"-0.00050"	"10/56"	"10"	"56"	"9988151.88647461"	"HCD"	"MS2"	"17.09643"	"695.7"	"100.000"	"51.1568"	"15791"	"15791"	"15773"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"991.2"	""	"976.9"	""	"937.9"	""	"1147.8"	"0.6"	"1328.5"	"1209.1"	""	"310"	"31"	"31.000"	"24.000"	"0.0136877384564877"	""	"0.002525"	"0.02428"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"402.58804"	"1205.74958"	"1205.75056"	"-0.82"	"-0.00033"	"5/54"	"5"	"54"	"16540508.1470337"	"HCD"	"MS2"	"4.738295"	"715.3"	"72.286"	"51.5365"	"15943"	"15943"	"15926"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1211.9"	""	"1243.8"	""	"942.8"	""	"1048.4"	""	"1292.5"	"1027.8"	""	"310"	"36"	"31.000"	"24.000"	"0.00376124564737775"	""	"0.003529"	"0.03921"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEASITK"	"[R].vEASITk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"603.37848"	"1205.74968"	"1205.75056"	"-0.73"	"-0.00044"	"6/56"	"6"	"56"	"5592808.01556396"	"HCD"	"MS2"	"40.04856"	"428.7"	"100.000"	"49.4577"	"15133"	"15133"	"15111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"682.7"	""	"590.1"	""	"453.6"	""	"762.4"	""	"822.0"	"759.5"	""	"310"	"39"	"31.000"	"24.000"	"0.0018127240560808"	""	"0.002328"	"0.02223"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"402.58810"	"1205.74976"	"1205.75056"	"-0.66"	"-0.00027"	"5/54"	"5"	"54"	"1025508.85192871"	"HCD"	"MS2"	"31.29301"	"65.9"	"100.000"	"52.1387"	"16186"	"16186"	"16163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.9"	""	"101.3"	""	"92.6"	""	"101.7"	""	"120.7"	"111.6"	""	"310"	"31"	"31.000"	"24.000"	"0.0123689176526536"	"24"	"0.003317"	"0.03683"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSILAK"	"[R].eSSILAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"603.37860"	"1205.74993"	"1205.75056"	"-0.53"	"-0.00032"	"6/52"	"6"	"52"	"4608120.33453369"	"HCD"	"MS2"	"29.39929"	"332.8"	"100.000"	"54.5717"	"17179"	"17179"	"17157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"534.4"	""	"458.5"	""	"425.8"	""	"497.9"	""	"625.8"	"613.7"	""	"310"	"29"	"31.000"	"24.000"	"0.0196034133858028"	""	"0.001596"	"0.01291"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"603.37860"	"1205.74993"	"1205.75056"	"-0.53"	"-0.00032"	"6/54"	"6"	"54"	"12610100.7769165"	"HCD"	"MS2"	"16.13385"	"872.5"	"100.000"	"50.8611"	"15704"	"15704"	"15686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1367.5"	""	"1267.5"	""	"1142.2"	""	"1406.4"	""	"1628.5"	"1450.5"	""	"310"	"28"	"31.000"	"24.000"	"0.0262018344404706"	""	"0.003317"	"0.03621"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"402.58817"	"1205.74994"	"1205.75056"	"-0.51"	"-0.00021"	"5/54"	"5"	"54"	"4228519.52752686"	"HCD"	"MS2"	"10.97414"	"268.0"	"100.000"	"50.9532"	"15742"	"15742"	"15718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"463.1"	""	"468.5"	""	"351.5"	""	"426.7"	""	"444.4"	"382.2"	""	"310"	"26"	"31.000"	"24.000"	"0.0373535341446422"	"21"	"0.003043"	"0.03256"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"603.37866"	"1205.75005"	"1205.75056"	"-0.42"	"-0.00026"	"12/54"	"12"	"54"	"3258435.77490234"	"HCD"	"MS2"	"9.848367"	"248.3"	"100.000"	"52.7883"	"16451"	"16451"	"16432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"354.8"	""	"373.0"	""	"311.1"	""	"405.7"	""	"477.0"	"431.8"	""	"310"	"43"	"31.000"	"24.000"	"0.000859669855084761"	""	"0.001049"	"0.00872"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLTVDK"	"[R].aTLTVDk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6S0"	"Synaptosomal-associated protein 47 OS=Rattus norvegicus OX=10116 GN=Snap47 PE=2 SV=1"	"Q6P6S0"	"Synaptosomal-associated protein 47 OS=Rattus norvegicus OX=10116 GN=Snap47 PE=2 SV=1"	"0"	"2"	"2"	"0.4872"	"0.0000"	"1"	"1"	"1"	"603.37866"	"1205.75005"	"1205.75056"	"-0.42"	"-0.00026"	"12/56"	"12"	"56"	"10548094.4589233"	"HCD"	"MS2"	"0"	"693.0"	"100.000"	"52.2038"	"16247"	"16247"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1058.4"	""	"1051.3"	""	"866.7"	""	"1120.3"	""	"1279.2"	"1192.9"	""	"310"	"39"	"31.000"	"24.000"	"0.00176738717071981"	""	"0.001261"	"0.009704"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"603.37872"	"1205.75017"	"1205.75056"	"-0.32"	"-0.00019"	"5/54"	"5"	"54"	"1145272.09344482"	"HCD"	"MS2"	"38.46901"	"107.1"	"100.000"	"55.8469"	"17699"	"17699"	"17676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.7"	""	"127.6"	""	"117.4"	""	"186.6"	""	"262.7"	"220.7"	""	"310"	"15"	"31.000"	"24.000"	"0.544918682818862"	"20"	"0.002875"	"0.03099"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4595"	"0.0000"	"1"	"1"	"1"	"603.37872"	"1205.75017"	"1205.75056"	"-0.32"	"-0.00019"	"5/54"	"5"	"54"	"1897609.71557617"	"HCD"	"MS2"	"34.09133"	"158.3"	"100.000"	"52.8345"	"16504"	"16504"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.5"	""	"232.8"	""	"192.9"	""	"262.2"	""	"312.0"	"295.5"	""	"310"	"37"	"31.000"	"24.000"	"0.00284663443218994"	""	"0.0001991"	"0.005606"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"603.37872"	"1205.75017"	"1205.75056"	"-0.32"	"-0.00019"	"12/54"	"12"	"54"	"2936116.63189697"	"HCD"	"MS2"	"18.87089"	"221.7"	"100.000"	"52.5190"	"16375"	"16375"	"16356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"325.5"	""	"329.0"	""	"280.6"	""	"356.1"	""	"418.1"	"394.8"	""	"310"	"41"	"31.000"	"24.000"	"0.00134999356443192"	""	"0.0001991"	"0.004268"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"603.37878"	"1205.75029"	"1205.75056"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"1385966.44702148"	"HCD"	"MS2"	"34.10695"	"123.9"	"100.000"	"55.3345"	"17490"	"17490"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.8"	""	"121.6"	""	"140.6"	""	"197.4"	""	"359.3"	"242.8"	""	"310"	"37"	"31.000"	"24.000"	"0.00333681168882278"	""	"0.0004582"	"0.006433"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"603.37878"	"1205.75029"	"1205.75056"	"-0.22"	"-0.00013"	"6/54"	"6"	"54"	"2106828.52752686"	"HCD"	"MS2"	"38.85359"	"171.1"	"100.000"	"53.0874"	"16573"	"16573"	"16554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"238.5"	""	"242.5"	""	"191.3"	""	"282.7"	""	"342.8"	"330.2"	""	"310"	"36"	"31.000"	"24.000"	"0.00393850769360142"	""	"0.0009964"	"0.008448"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEASITK"	"[R].vEASITk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"603.37878"	"1205.75029"	"1205.75056"	"-0.22"	"-0.00013"	"10/56"	"10"	"56"	"3790002.42883301"	"HCD"	"MS2"	"26.81973"	"301.9"	"100.000"	"50.0179"	"15326"	"15326"	"15308"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"415.1"	""	"393.4"	""	"315.4"	""	"538.2"	""	"615.7"	"591.9"	""	"310"	"33"	"31.000"	"24.000"	"0.00698765892039263"	"22"	"0.002875"	"0.03096"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"603.37885"	"1205.75041"	"1205.75056"	"-0.12"	"-0.00007"	"12/54"	"12"	"54"	"10280490.3012085"	"HCD"	"MS2"	"4.59587"	"672.4"	"100.000"	"51.9062"	"16125"	"16125"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1094.0"	""	"1077.5"	""	"853.4"	""	"1058.9"	""	"1183.0"	"1099.2"	""	"310"	"43"	"31.000"	"24.000"	"0.000805993794626949"	""	"0.0003294"	"0.006185"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLTVDK"	"[R].aTLTVDk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6S0"	"Synaptosomal-associated protein 47 OS=Rattus norvegicus OX=10116 GN=Snap47 PE=2 SV=1"	"Q6P6S0"	"Synaptosomal-associated protein 47 OS=Rattus norvegicus OX=10116 GN=Snap47 PE=2 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"603.37897"	"1205.75066"	"1205.75056"	"0.08"	"0.00005"	"12/56"	"12"	"56"	"12002118.3191528"	"HCD"	"MS2"	"0"	"821.6"	"100.000"	"52.4754"	"16324"	"16324"	"16307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1325.3"	""	"1263.3"	""	"1031.2"	""	"1279.6"	""	"1463.7"	"1420.2"	""	"310"	"38"	"31.000"	"24.000"	"0.00271851477785473"	""	"0.001103"	"0.009179"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"603.37939"	"1205.75151"	"1205.75056"	"0.79"	"0.00048"	"6/54"	"6"	"54"	"547259018.289063"	"HCD"	"MS2"	"0"	"780.0"	"2.208"	"51.4741"	"15918"	"15918"	"15901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1373.0"	""	"1390.7"	""	"1019.1"	""	"1165.2"	""	"1312.1"	"1115.7"	""	"310"	"40"	"31.000"	"24.000"	"0.00151820947738348"	""	"0.007522"	"0.09623"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"603.37964"	"1205.75200"	"1205.75056"	"1.20"	"0.00072"	"6/54"	"6"	"54"	"144764317.711914"	"HCD"	"MS2"	"0"	"638.1"	"6.822"	"51.8531"	"16070"	"16070"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1043.8"	""	"1071.7"	""	"855.0"	""	"922.6"	""	"1171.3"	"978.1"	""	"307"	"40"	"31.000"	"24.000"	"0.00153146959796762"	""	"0.004392"	"0.05155"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"603.37976"	"1205.75224"	"1205.75056"	"1.40"	"0.00084"	"6/54"	"6"	"54"	"374487557.056641"	"HCD"	"MS2"	"0.01931193"	"665.4"	"2.747"	"51.3066"	"15886"	"15886"	"15873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1157.8"	""	"1134.3"	""	"882.6"	""	"995.1"	""	"1126.6"	"1000.0"	""	"307"	"38"	"31.000"	"24.000"	"0.00222899133299718"	""	"0.007104"	"0.09042"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSILAK"	"[R].eSSILAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"603.37994"	"1205.75261"	"1205.75056"	"1.70"	"0.00103"	"6/52"	"6"	"52"	"1985276.23779297"	"HCD"	"MS2"	"9.350079"	"156.1"	"100.000"	"54.8936"	"17310"	"17310"	"17287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"215.0"	""	"186.8"	""	"171.6"	""	"258.8"	""	"327.8"	"323.4"	""	"307"	"33"	"31.000"	"24.000"	"0.00781822887072795"	""	"0.002189"	"0.02021"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSILAK"	"[R].eSSILAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"603.37994"	"1205.75261"	"1205.75056"	"1.70"	"0.00103"	"10/52"	"10"	"52"	"4919884.97833252"	"HCD"	"MS2"	"20.28572"	"362.6"	"100.000"	"54.2956"	"17100"	"17100"	"17079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"567.2"	""	"456.8"	""	"454.7"	""	"554.4"	""	"708.5"	"702.5"	""	"307"	"32"	"31.000"	"24.000"	"0.00885336521307105"	""	"0.002525"	"0.02494"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LATDVTK"	"[K].lATDVTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"603.38025"	"1205.75322"	"1205.75056"	"2.21"	"0.00133"	"12/54"	"12"	"54"	"91584300.1220703"	"HCD"	"MS2"	"0.04795783"	"684.9"	"11.129"	"51.5954"	"16000"	"16000"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1133.0"	""	"1140.2"	""	"920.3"	""	"986.2"	""	"1253.4"	"1054.8"	""	"307"	"43"	"31.000"	"24.000"	"0.000696800381558062"	""	"0.00394"	"0.04338"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPFHAEV"	"[K].dYPFHAEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.80280"	"1206.59831"	"1206.59925"	"-0.78"	"-0.00047"	"7/70"	"7"	"70"	"2555074.55718994"	"HCD"	"MS2"	"3.372404"	"50.1"	"100.000"	"74.1652"	"25129"	"25129"	"25110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.3"	""	"61.0"	""	"76.2"	""	"74.3"	""	"103.7"	"94.3"	""	"538"	"18"	"34.000"	"27.000"	"0.434262451786325"	"14"	"0.009411"	"0.1243"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYDYFR"	"[R].dVYDYFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"603.80316"	"1206.59905"	"1206.59925"	"-0.17"	"-0.00010"	"5/54"	"5"	"54"	"1478877.32904053"	"HCD"	"MS2"	"51.68654"	"86.8"	"100.000"	"93.0918"	"32802"	"32802"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.4"	""	"104.9"	""	"113.5"	""	"149.5"	""	"149.2"	"155.1"	""	"545"	"17"	"34.000"	"27.000"	"0.490192324372594"	"15"	"0.00296"	"0.03174"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPFHAEV"	"[K].dYPFHAEV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.80316"	"1206.59905"	"1206.59925"	"-0.17"	"-0.00010"	"8/70"	"8"	"70"	"4324291.91748047"	"HCD"	"MS2"	"4.17602"	"68.3"	"100.000"	"74.5257"	"25305"	"25305"	"25290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.1"	""	"93.1"	""	"86.9"	""	"116.9"	""	"127.3"	"135.2"	""	"545"	"15"	"34.000"	"27.000"	"0.942684804576182"	"13"	"0.00856"	"0.1094"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYDYFR"	"[R].dVYDYFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"603.80322"	"1206.59917"	"1206.59925"	"-0.07"	"-0.00004"	"5/54"	"5"	"54"	"1371293.21710205"	"HCD"	"MS2"	"55.10799"	"77.6"	"100.000"	"93.1514"	"32790"	"32790"	"32769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.2"	""	"94.9"	""	"99.2"	""	"134.5"	"0.1"	"138.6"	"146.4"	""	"541"	"19"	"34.000"	"27.000"	"0.317809788611142"	"16"	"0.002834"	"0.02987"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"603.83704"	"1206.66680"	"1206.66800"	"-1.00"	"-0.00060"	"6/72"	"6"	"72"	"2695960.76348877"	"HCD"	"MS2"	"0"	"117.5"	"100.000"	"66.7617"	"22124"	"22124"	"22107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.5"	""	"127.3"	""	"140.4"	""	"204.0"	""	"244.7"	"263.4"	""	"791"	"48"	"35.000"	"28.000"	"0.000566430314162687"	"22"	"9.9E-05"	"0.0009421"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"603.83710"	"1206.66692"	"1206.66800"	"-0.90"	"-0.00054"	"6/72"	"6"	"72"	"3238444.64825439"	"HCD"	"MS2"	"5.309519"	"147.8"	"100.000"	"66.4750"	"22009"	"22009"	"21992"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.0"	""	"162.0"	""	"187.2"	""	"259.2"	""	"296.4"	"306.6"	""	"791"	"52"	"35.000"	"28.000"	"0.000269244281363375"	"22"	"0.0001686"	"0.001353"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQEFLDR"	"[K].gLQEFLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"603.83734"	"1206.66741"	"1206.66800"	"-0.49"	"-0.00030"	"7/72"	"7"	"72"	"873483.485595703"	"HCD"	"MS2"	"13.23785"	"49.8"	"100.000"	"92.9109"	"32729"	"32729"	"32707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.1"	""	"49.1"	""	"68.1"	""	"93.0"	""	"102.5"	"103.9"	""	"777"	"24"	"35.000"	"28.000"	"0.155021174567692"	"20"	"0.0001686"	"0.001331"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"603.83734"	"1206.66741"	"1206.66800"	"-0.49"	"-0.00030"	"6/72"	"6"	"72"	"3086907.38861084"	"HCD"	"MS2"	"0"	"144.7"	"100.000"	"66.4647"	"22038"	"22038"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.2"	"3.0"	"164.0"	""	"168.5"	""	"267.7"	""	"271.9"	"309.7"	""	"777"	"52"	"35.000"	"28.000"	"0.000270016947383248"	"23"	"0.0001686"	"0.001173"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAFLEDVR"	"[K].qAFLEDVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"603.83752"	"1206.66777"	"1206.66800"	"-0.19"	"-0.00012"	"6/72"	"6"	"72"	"2895222.40002441"	"HCD"	"MS2"	"0"	"126.3"	"100.000"	"66.7581"	"22154"	"22154"	"22141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.2"	""	"138.9"	""	"151.2"	""	"225.5"	""	"257.9"	"259.5"	""	"784"	"53"	"35.000"	"28.000"	"0.000212954129945034"	"22"	"0.0001686"	"0.001138"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLQEFLDR"	"[K].gLQEFLDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"603.83789"	"1206.66850"	"1206.66800"	"0.42"	"0.00025"	"7/72"	"7"	"72"	"788830.19128418"	"HCD"	"MS2"	"28.86073"	"49.0"	"100.000"	"92.9684"	"32716"	"32716"	"32696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"43.4"	""	"58.4"	""	"98.3"	""	"102.9"	"103.0"	""	"776"	"26"	"35.000"	"28.000"	"0.0935043306330398"	"19"	"0.0001686"	"0.001339"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLSNMER"	"[R].iVLSNmER.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"603.83893"	"1206.67058"	"1206.67137"	"-0.66"	"-0.00040"	"7/68"	"7"	"68"	"2235746.97949219"	"HCD"	"MS2"	"30.65267"	"129.4"	"100.000"	"43.9553"	"12903"	"12903"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.2"	""	"156.1"	""	"148.3"	""	"279.5"	""	"241.6"	"222.1"	""	"798"	"18"	"36.000"	"29.000"	"0.656104317562758"	"20"	"0.005308"	"0.06805"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTDADAK"	"[R].aGTDADAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4255"	"0.0000"	"1"	"1"	"1"	"603.84021"	"1206.67314"	"1206.67304"	"0.09"	"0.00005"	"12/62"	"12"	"62"	"2092272.32403564"	"HCD"	"MS2"	"6.904315"	"177.4"	"100.000"	"24.8850"	"5224"	"5224"	"5213"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.2"	"3.1"	"142.5"	""	"170.5"	""	"387.9"	"2.3"	"387.4"	"392.4"	""	"808"	"47"	"36.000"	"29.000"	"0.000838265061051784"	""	"0.0001686"	"0.001554"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVSQAK"	"[R].sEVSQAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"603.85815"	"1206.70903"	"1206.70942"	"-0.32"	"-0.00020"	"6/58"	"6"	"58"	"1279487.20172119"	"HCD"	"MS2"	"0"	"114.2"	"100.000"	"26.4128"	"5800"	"5800"	"5778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.3"	""	"140.6"	""	"171.8"	""	"175.4"	""	"217.2"	"221.1"	""	"584"	"35"	"34.000"	"27.000"	"0.00931929053689422"	""	"0.001488"	"0.01208"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVSQAK"	"[R].sEVSQAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"603.85834"	"1206.70940"	"1206.70942"	"-0.02"	"-0.00001"	"6/58"	"6"	"58"	"1405906.09863281"	"HCD"	"MS2"	"0"	"124.3"	"100.000"	"26.2384"	"5769"	"5769"	"5746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.1"	""	"164.0"	""	"181.2"	""	"181.2"	""	"243.0"	"243.1"	""	"584"	"35"	"34.000"	"27.000"	"0.00894093322637677"	""	"0.001261"	"0.009961"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVSNVK"	"[R].tTVSNVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"603.87604"	"1206.74480"	"1206.74581"	"-0.84"	"-0.00050"	"6/58"	"6"	"58"	"4594750.25738525"	"HCD"	"MS2"	"28.25561"	"364.1"	"100.000"	"33.6800"	"8740"	"8740"	"8713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"561.6"	""	"542.4"	""	"470.2"	""	"583.9"	""	"634.0"	"659.3"	""	"331"	"34"	"32.000"	"25.000"	"0.00627766300131444"	""	"0.0005161"	"0.006999"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVSNVK"	"[R].tTVSNVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"603.87604"	"1206.74480"	"1206.74581"	"-0.84"	"-0.00050"	"12/58"	"12"	"58"	"4545259.75720215"	"HCD"	"MS2"	"29.76836"	"340.7"	"100.000"	"33.7953"	"8749"	"8749"	"8723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"539.8"	""	"498.4"	""	"455.9"	""	"557.8"	""	"571.6"	"604.7"	""	"331"	"39"	"32.000"	"25.000"	"0.00204549300235067"	""	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTNMAAK"	"[R].nTNMAAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"604.34607"	"1207.68486"	"1207.68691"	"-1.70"	"-0.00103"	"6/60"	"6"	"60"	"2933677.9309082"	"HCD"	"MS2"	"0"	"238.1"	"100.000"	"29.1499"	"6878"	"6878"	"6859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.8"	""	"382.6"	""	"385.5"	""	"251.0"	""	"381.8"	"464.3"	""	"701"	"36"	"35.000"	"28.000"	"0.00870338153406098"	"25"	"0.00212"	"0.01908"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTNMAAK"	"[R].nTNMAAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"604.34692"	"1207.68657"	"1207.68691"	"-0.28"	"-0.00017"	"12/60"	"12"	"60"	"2956177.54589844"	"HCD"	"MS2"	"3.386489"	"241.0"	"100.000"	"28.9631"	"6843"	"6843"	"6828"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"388.8"	""	"392.8"	""	"393.7"	""	"265.3"	""	"389.0"	"453.0"	""	"703"	"39"	"35.000"	"28.000"	"0.0040824918776488"	""	"0.001348"	"0.01122"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTTPYIR"	"[K].dLTTPYIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"604.34723"	"1207.68718"	"1207.68840"	"-1.01"	"-0.00061"	"5/62"	"5"	"62"	"1345991.88549805"	"HCD"	"MS2"	"19.49541"	"73.1"	"100.000"	"68.3550"	"22770"	"22770"	"22748"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.5"	""	"96.9"	""	"85.5"	""	"130.4"	""	"164.4"	"136.0"	""	"729"	"23"	"35.000"	"28.000"	"0.171671235471689"	"25"	"0.0001991"	"0.004803"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTTPYIR"	"[K].dLTTPYIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"604.34760"	"1207.68791"	"1207.68840"	"-0.41"	"-0.00025"	"5/62"	"5"	"62"	"4232541.55731201"	"HCD"	"MS2"	"38.88824"	"152.9"	"100.000"	"68.0507"	"22646"	"22646"	"22628"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.4"	""	"217.2"	""	"180.7"	""	"268.1"	""	"319.5"	"318.4"	""	"713"	"34"	"35.000"	"28.000"	"0.0142908984834134"	"26"	"0.0001686"	"0.001766"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTTPYIR"	"[K].dLTTPYIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05545"	"Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"604.34772"	"1207.68816"	"1207.68840"	"-0.20"	"-0.00012"	"5/62"	"5"	"62"	"4493275.81134033"	"HCD"	"MS2"	"34.92268"	"168.0"	"100.000"	"68.1832"	"22732"	"22732"	"22714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.2"	""	"227.1"	""	"184.5"	""	"328.0"	""	"340.4"	"335.7"	""	"713"	"34"	"35.000"	"28.000"	"0.0154546628145154"	"26"	"0.0001991"	"0.002273"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDISIFLR"	"[K].dDISIFLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"604.34833"	"1207.68938"	"1207.68840"	"0.81"	"0.00049"	"5/62"	"5"	"62"	"368740.255249023"	"HCD"	"MS2"	"14.48591"	"19.5"	"100.000"	"109.8933"	"39477"	"39477"	"39464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"26.2"	""	"17.8"	""	"36.3"	""	"43.2"	"35.9"	""	"708"	"27"	"35.000"	"28.000"	"0.0650134573545315"	"19"	"0.0001991"	"0.004062"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDISIFLR"	"[K].dDISIFLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"604.34888"	"1207.69048"	"1207.68840"	"1.72"	"0.00104"	"5/62"	"5"	"62"	"310103.145385742"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"109.6251"	"39359"	"39359"	"39346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.1"	""	"21.3"	""	"21.8"	""	"22.1"	""	"32.2"	"32.3"	""	"711"	"20"	"35.000"	"28.000"	"0.318302174152881"	"18"	"0.002922"	"0.03131"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVSSK"	"[R].sEIVSSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"604.36957"	"1207.73186"	"1207.72982"	"1.68"	"0.00102"	"9/58"	"9"	"58"	"4191436.7935791"	"HCD"	"MS2"	"26.80909"	"322.4"	"100.000"	"39.1342"	"10914"	"10914"	"10889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"394.0"	""	"319.6"	""	"351.3"	""	"721.5"	"4.9"	"634.3"	"634.2"	""	"318"	"20"	"32.000"	"25.000"	"0.177990623471277"	"19"	"0.00394"	"0.04304"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIVSSK"	"[R].sEIVSSk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"604.36987"	"1207.73247"	"1207.72982"	"2.19"	"0.00132"	"10/58"	"10"	"58"	"4328519.98547363"	"HCD"	"MS2"	"34.57605"	"313.9"	"100.000"	"39.0446"	"10913"	"10913"	"10890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"375.3"	""	"314.5"	""	"359.0"	""	"685.5"	""	"633.5"	"614.4"	""	"324"	"24"	"32.000"	"25.000"	"0.0582793922952302"	"21"	"0.002373"	"0.02243"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVDNSNR"	"[K].fQVDNSNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"604.81390"	"1208.62053"	"1208.62212"	"-1.31"	"-0.00079"	"6/72"	"6"	"72"	"4774479.99523926"	"HCD"	"MS2"	"4.244964"	"281.5"	"100.000"	"35.2293"	"9328"	"9328"	"9314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"595.1"	""	"373.2"	""	"329.1"	""	"485.6"	"2.6"	"436.4"	"435.9"	""	"611"	"34"	"34.000"	"27.000"	"0.0117763638266893"	"27"	"0.001872"	"0.01541"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVDNSNR"	"[K].fQVDNSNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"604.81409"	"1208.62090"	"1208.62212"	"-1.01"	"-0.00061"	"6/72"	"6"	"72"	"2461414.18334961"	"HCD"	"MS2"	"9.612171"	"151.1"	"100.000"	"35.5369"	"9452"	"9452"	"9434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"292.9"	""	"201.0"	""	"180.5"	""	"249.8"	"1.3"	"238.8"	"264.6"	""	"598"	"34"	"34.000"	"27.000"	"0.011446459825173"	"24"	"0.0009352"	"0.008069"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVDNSNR"	"[K].fQVDNSNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"604.81415"	"1208.62102"	"1208.62212"	"-0.91"	"-0.00055"	"6/72"	"6"	"72"	"5007380.27618408"	"HCD"	"MS2"	"3.99639"	"277.4"	"100.000"	"35.1193"	"9321"	"9321"	"9304"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"573.2"	""	"372.3"	""	"335.7"	""	"477.3"	"4.0"	"428.4"	"428.5"	""	"598"	"34"	"34.000"	"27.000"	"0.011160179718092"	"27"	"0.001261"	"0.01022"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQVDNSNR"	"[K].fQVDNSNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"604.81488"	"1208.62248"	"1208.62212"	"0.30"	"0.00018"	"6/72"	"6"	"72"	"2533743.6427002"	"HCD"	"MS2"	"0"	"159.5"	"100.000"	"35.4130"	"9439"	"9439"	"9421"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.9"	""	"206.9"	""	"180.2"	""	"270.7"	""	"240.4"	"284.4"	""	"605"	"34"	"34.000"	"27.000"	"0.0113690814797254"	"26"	"0.001453"	"0.01165"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"604.81604"	"1208.62480"	"1208.62480"	"0.00"	"0.00000"	"5/66"	"5"	"66"	"1520847.0513916"	"HCD"	"MS2"	"14.7922"	"36.9"	"100.000"	"103.2015"	"36858"	"36858"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.9"	""	"40.6"	""	"51.9"	""	"59.7"	"0.6"	"75.0"	"80.4"	""	"642"	"41"	"35.000"	"28.000"	"0.00267611660262903"	"21"	"0.0001991"	"0.002983"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEELTPI"	"[K].yDEELTPI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"604.81616"	"1208.62505"	"1208.62480"	"0.20"	"0.00012"	"4/66"	"4"	"66"	"1231340.53747559"	"HCD"	"MS2"	"15.71326"	"31.3"	"100.000"	"103.3772"	"36946"	"36946"	"36927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.8"	""	"36.8"	""	"44.9"	""	"53.2"	"0.2"	"64.4"	"64.3"	""	"642"	"27"	"35.000"	"28.000"	"0.0673759702643151"	"20"	"0.001453"	"0.01173"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAYGHFGR"	"[R].tAAYGHFGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"403.55032"	"1208.63642"	"1208.63737"	"-0.79"	"-0.00032"	"8/64"	"8"	"64"	"5103150.06060791"	"HCD"	"MS2"	"27.82801"	"171.7"	"100.000"	"30.3801"	"7375"	"7375"	"7357"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.2"	""	"232.2"	""	"257.3"	""	"268.6"	""	"313.5"	"321.3"	""	"693"	"58"	"35.000"	"28.000"	"5.6846435641364E-05"	"26"	"0"	"5.265E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAYGHFGR"	"[R].tAAYGHFGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"403.55038"	"1208.63660"	"1208.63737"	"-0.64"	"-0.00026"	"8/64"	"8"	"64"	"4698343.23413086"	"HCD"	"MS2"	"24.92924"	"164.9"	"100.000"	"30.2528"	"7364"	"7364"	"7345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"240.8"	""	"229.3"	""	"245.0"	""	"252.5"	""	"292.6"	"302.8"	""	"697"	"56"	"35.000"	"28.000"	"8.55466057116233E-05"	"21"	"0"	"0.0003602"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLmTER.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.82880"	"1208.65032"	"1208.65064"	"-0.27"	"-0.00016"	"7/72"	"7"	"72"	"2063876.5423584"	"HCD"	"MS2"	"16.54051"	"103.6"	"100.000"	"30.3225"	"7352"	"7352"	"7334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.7"	""	"116.6"	""	"111.9"	""	"224.9"	"0.7"	"215.4"	"199.0"	""	"695"	"26"	"35.000"	"28.000"	"0.0870872965428658"	"14"	"0.001615"	"0.01369"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATLMTER"	"[R].aAATLmTER.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.82898"	"1208.65068"	"1208.65064"	"0.04"	"0.00002"	"7/72"	"7"	"72"	"2103628.50836182"	"HCD"	"MS2"	"0"	"108.4"	"100.000"	"30.1839"	"7336"	"7336"	"7319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.6"	""	"113.0"	""	"115.6"	""	"238.7"	""	"218.7"	"212.2"	""	"714"	"27"	"35.000"	"28.000"	"0.0689712689175042"	"14"	"0.002286"	"0.02177"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVNWIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"604.83441"	"1208.66155"	"1208.66252"	"-0.81"	"-0.00049"	"6/56"	"6"	"56"	"1423521.09594727"	"HCD"	"MS2"	"9.679013"	"83.2"	"100.000"	"83.9413"	"29116"	"29116"	"29100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.9"	""	"125.6"	""	"96.4"	""	"133.3"	""	"156.7"	"165.6"	""	"702"	"14"	"35.000"	"28.000"	"1.53217057116298"	"20"	"0.004073"	"0.04436"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVNWIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"604.83447"	"1208.66167"	"1208.66252"	"-0.71"	"-0.00043"	"6/56"	"6"	"56"	"1105048.48773193"	"HCD"	"MS2"	"5.775902"	"72.2"	"100.000"	"84.0276"	"29122"	"29122"	"29101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.1"	""	"108.5"	""	"91.3"	""	"105.3"	""	"152.4"	"140.2"	""	"707"	"13"	"35.000"	"28.000"	"1.72738609027692"	"15"	"0.002588"	"0.02694"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLHYIR"	"[R].dYLHYIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"403.55881"	"1208.66187"	"1208.66252"	"-0.54"	"-0.00022"	"5/48"	"5"	"48"	"730716.498657227"	"HCD"	"MS2"	"36.04726"	"20.5"	"100.000"	"61.2910"	"19908"	"19908"	"19880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"28.5"	""	"34.4"	""	"34.2"	""	"37.5"	"35.6"	""	"705"	"17"	"35.000"	"28.000"	"0.682588742291179"	"16"	"0.004819"	"0.05841"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVNWIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"5"	"604.83490"	"1208.66252"	"1208.66252"	"0.00"	"0.00000"	"6/56"	"6"	"56"	"755605.67364502"	"HCD"	"MS2"	"52.59437"	"51.7"	"100.000"	"83.6484"	"28998"	"28998"	"28980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"70.4"	""	"70.0"	""	"78.9"	"1.1"	"107.7"	"94.7"	""	"686"	"4"	"35.000"	"28.000"	"15.2157764868481"	"15"	"0.00455"	"0.05299"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVNWIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"604.83490"	"1208.66252"	"1208.66252"	"0.00"	"0.00000"	"6/56"	"6"	"56"	"1087772.74401855"	"HCD"	"MS2"	"15.23567"	"67.5"	"100.000"	"83.7230"	"28999"	"28999"	"28981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.7"	""	"95.1"	""	"85.2"	""	"120.8"	"0.0"	"119.9"	"120.8"	""	"686"	"8"	"35.000"	"28.000"	"5.70550539076967"	"17"	"0.005549"	"0.07028"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMADTGK"	"[K].qMADTGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"604.83875"	"1208.67021"	"1208.67093"	"-0.59"	"-0.00036"	"6/62"	"6"	"62"	"3574527.11444092"	"HCD"	"MS2"	"0"	"288.6"	"100.000"	"30.7779"	"7570"	"7570"	"7559"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"465.8"	""	"311.9"	""	"285.1"	""	"353.9"	""	"692.3"	"641.9"	""	"676"	"29"	"35.000"	"28.000"	"0.0392569631478035"	"24"	"0.003317"	"0.03651"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMADTGK"	"[K].qMADTGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"604.83893"	"1208.67058"	"1208.67093"	"-0.29"	"-0.00017"	"6/62"	"6"	"62"	"3076131.31384277"	"HCD"	"MS2"	"0"	"254.5"	"100.000"	"30.9528"	"7601"	"7601"	"7590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"402.0"	""	"270.0"	""	"261.8"	""	"307.5"	""	"605.5"	"576.0"	""	"686"	"38"	"35.000"	"28.000"	"0.00496928745765853"	"25"	"0.001951"	"0.01704"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMADTGK"	"[K].qMADTGk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"604.84027"	"1208.67327"	"1208.67093"	"1.93"	"0.00117"	"10/62"	"10"	"62"	"1197975.33679199"	"HCD"	"MS2"	"0"	"106.1"	"100.000"	"30.5073"	"7466"	"7466"	"7455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.2"	""	"129.1"	""	"114.1"	""	"155.6"	"2.2"	"225.6"	"211.5"	""	"704"	"26"	"35.000"	"28.000"	"0.0852202224451134"	"22"	"0.00212"	"0.01918"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVVYTGDR"	"[R].gIVVYTGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"604.84509"	"1208.68291"	"1208.68365"	"-0.62"	"-0.00037"	"7/68"	"7"	"68"	"2916569.74230957"	"HCD"	"MS2"	"5.251199"	"164.2"	"100.000"	"54.5624"	"17209"	"17209"	"17188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.4"	""	"217.1"	""	"232.0"	""	"269.3"	"0.4"	"305.0"	"318.0"	""	"576"	"43"	"34.000"	"27.000"	"0.00141056299978112"	"23"	"0"	"0.0001284"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVVYTGDR"	"[R].gIVVYTGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"604.84528"	"1208.68328"	"1208.68365"	"-0.31"	"-0.00019"	"8/68"	"8"	"68"	"1431046.47027588"	"HCD"	"MS2"	"6.303189"	"96.4"	"100.000"	"54.8838"	"17340"	"17340"	"17321"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.6"	""	"129.6"	""	"133.5"	""	"157.4"	""	"190.8"	"178.0"	""	"599"	"38"	"34.000"	"27.000"	"0.00431913547781699"	"16"	"0"	"0.0001552"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVSAESLR"	"[K].fAVSAESLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"604.84540"	"1208.68352"	"1208.68365"	"-0.11"	"-0.00007"	"7/70"	"7"	"70"	"565022.402770996"	"HCD"	"MS2"	"23.67357"	"37.5"	"100.000"	"72.6660"	"24548"	"24548"	"24526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"47.1"	""	"49.8"	""	"57.6"	"1.8"	"69.5"	"76.3"	""	"599"	"47"	"34.000"	"27.000"	"0.000670496981001218"	"24"	"0"	"0.0002984"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITNHLVAIDR"	"[K].GITNHLVAIDR.[A]"	""	"1"	"1"	"Q9WV57"	"Macrophage-expressed gene 1 protein OS=Rattus norvegicus OX=10116 GN=Mpeg1 PE=2 SV=2"	"Q9WV57"	"Macrophage-expressed gene 1 protein OS=Rattus norvegicus OX=10116 GN=Mpeg1 PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"604.84540"	"1208.68352"	"1208.67460"	"7.38"	"0.00446"	"7/108"	"7"	"108"	"546580.619445801"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"64.0479"	"21024"	"21024"	"21004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.8"	""	"47.0"	""	"43.2"	""	"75.6"	"2.6"	"83.4"	"82.8"	"NoQuanLabels"	"599"	"16"	"34.000"	"27.000"	"0.798724170024183"	"17"	"0.008289"	"0.1054"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVVYTGDR"	"[R].gIVVYTGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.84540"	"1208.68352"	"1208.68365"	"-0.11"	"-0.00007"	"8/68"	"8"	"68"	"1192255.43664551"	"HCD"	"MS2"	"5.57332"	"80.7"	"100.000"	"55.2448"	"17453"	"17453"	"17434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.7"	""	"111.3"	""	"108.8"	""	"127.2"	""	"170.7"	"154.4"	""	"599"	"36"	"34.000"	"27.000"	"0.00768062968937057"	"15"	"0"	"0.0001259"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVSAESLR"	"[K].fAVSAESLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"604.84546"	"1208.68364"	"1208.68365"	"-0.01"	"-0.00001"	"7/70"	"7"	"70"	"1919790.02307129"	"HCD"	"MS2"	"4.48419"	"95.8"	"100.000"	"72.9588"	"24667"	"24667"	"24648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.0"	""	"126.7"	""	"129.5"	""	"160.4"	""	"178.9"	"197.0"	""	"598"	"47"	"34.000"	"27.000"	"0.000587044722773977"	"25"	"0"	"0.0001585"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVVYTGDR"	"[R].gIVVYTGDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"604.84552"	"1208.68376"	"1208.68365"	"0.09"	"0.00006"	"8/68"	"8"	"68"	"3094632.144104"	"HCD"	"MS2"	"7.574948"	"166.5"	"100.000"	"54.9280"	"17324"	"17324"	"17303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.0"	""	"233.7"	""	"219.1"	""	"261.1"	""	"316.5"	"314.2"	""	"596"	"40"	"34.000"	"27.000"	"0.00269908315067664"	"24"	"0"	"0.0001793"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVSAESLR"	"[K].fAVSAESLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"604.84558"	"1208.68389"	"1208.68365"	"0.19"	"0.00012"	"7/70"	"7"	"70"	"497778.743041992"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"72.5609"	"24476"	"24476"	"24448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.1"	""	"45.4"	""	"51.7"	""	"61.6"	""	"70.0"	"72.2"	""	"596"	"43"	"34.000"	"27.000"	"0.00157839706279714"	"22"	"0"	"0.0001459"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAVSAESLR"	"[K].fAVSAESLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"Q62698"	"Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1li2 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"604.84558"	"1208.68389"	"1208.68365"	"0.19"	"0.00012"	"7/70"	"7"	"70"	"1878583.49841309"	"HCD"	"MS2"	"5.191"	"95.6"	"100.000"	"72.8768"	"24604"	"24604"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.3"	""	"117.7"	""	"138.0"	""	"164.1"	"1.9"	"186.9"	"187.6"	""	"596"	"47"	"34.000"	"27.000"	"0.000554901966725535"	"23"	"0"	"0.0002341"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAESSK"	"[K].tQAESSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"604.84747"	"1208.68767"	"1208.68869"	"-0.84"	"-0.00051"	"10/68"	"10"	"68"	"457410.45324707"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"21.3083"	"3800"	"3800"	"3769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.6"	""	"47.9"	""	"45.6"	""	"74.2"	"1.2"	"86.5"	"72.5"	""	"623"	"17"	"34.000"	"27.000"	"0.559059524758332"	"26"	"0.002462"	"0.02298"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGSVDFGR"	"[R].qDGSVDFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"605.30627"	"1209.60527"	"1209.60613"	"-0.71"	"-0.00043"	"6/88"	"6"	"88"	"2507236.75823975"	"HCD"	"MS2"	"40.87991"	"171.3"	"100.000"	"38.2568"	"10591"	"10591"	"10565"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.9"	""	"221.9"	""	"204.6"	""	"286.5"	""	"335.0"	"334.7"	""	"491"	"25"	"33.000"	"26.000"	"0.0729544010791686"	"21"	"0"	"0.0002412"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGSVDFGR"	"[R].qDGSVDFGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"605.30701"	"1209.60674"	"1209.60613"	"0.50"	"0.00030"	"6/88"	"6"	"88"	"1983106.77972412"	"HCD"	"MS2"	"45.67501"	"130.9"	"100.000"	"38.3096"	"10577"	"10577"	"10550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.4"	""	"166.1"	""	"158.8"	""	"213.2"	""	"257.1"	"239.7"	""	"502"	"26"	"33.000"	"27.000"	"0.0696103346267612"	"21"	"0.0001686"	"0.001278"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLSGMSGSR"	"[K].aDLSGMSGSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"605.30859"	"1209.60991"	"1209.60950"	"0.34"	"0.00020"	"7/86"	"7"	"86"	"2355617.92382813"	"HCD"	"MS2"	"43.97513"	"174.6"	"100.000"	"38.7416"	"10789"	"10789"	"10770"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"243.8"	""	"216.8"	""	"235.2"	""	"264.8"	""	"363.0"	"336.5"	""	"535"	"33"	"34.000"	"27.000"	"0.0140385995616814"	"26"	"0"	"0.0001505"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVNWIER"	"[R].yVnWIER.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"605.32410"	"1209.64092"	"1209.64654"	"-4.65"	"-0.00281"	"5/56"	"5"	"56"	"623372.258056641"	"HCD"	"MS2"	"61.83131"	"39.3"	"100.000"	"82.8014"	"28655"	"28655"	"28630"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.3"	""	"58.1"	""	"46.6"	""	"74.0"	""	"72.3"	"69.5"	""	"602"	"8"	"34.000"	"27.000"	"4.61919711822587"	"15"	"0.007104"	"0.09063"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGPPAAGPGNR"	"[R].sGPPAAGPGNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"605.33118"	"1209.65508"	"1209.65375"	"1.10"	"0.00066"	"8/82"	"8"	"82"	"815620.540771484"	"HCD"	"MS2"	"42.34637"	"54.1"	"100.000"	"21.4889"	"3911"	"3911"	"3883"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"67.6"	""	"64.9"	""	"100.1"	""	"106.8"	"102.5"	""	"687"	"22"	"35.000"	"28.000"	"0.204609946302215"	"18"	"0.001348"	"0.01065"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIQHTYR"	"[K].yIQHTYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.33167"	"1209.65605"	"1209.65777"	"-1.42"	"-0.00086"	"5/56"	"5"	"56"	"2414602.11364746"	"HCD"	"MS2"	"0"	"134.0"	"100.000"	"25.2059"	"5352"	"5352"	"5337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.4"	""	"155.0"	""	"187.0"	""	"238.2"	""	"239.7"	"264.2"	""	"663"	"18"	"35.000"	"28.000"	"0.542604676853319"	"14"	"0.009005"	"0.1165"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIQHTYR"	"[K].yIQHTYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"403.89029"	"1209.65631"	"1209.65777"	"-1.21"	"-0.00049"	"6/56"	"6"	"56"	"24203220.4221191"	"HCD"	"MS2"	"5.99193"	"276.8"	"45.639"	"25.3417"	"5368"	"5368"	"5361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"390.7"	""	"338.2"	""	"386.4"	""	"453.8"	"3.9"	"499.7"	"550.2"	""	"663"	"21"	"35.000"	"28.000"	"0.255554499994859"	"23"	"0.006157"	"0.07493"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIQHTYR"	"[K].yIQHTYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"605.33191"	"1209.65654"	"1209.65777"	"-1.02"	"-0.00062"	"5/56"	"5"	"56"	"3539482.64111328"	"HCD"	"MS2"	"0"	"180.8"	"100.000"	"25.3786"	"5382"	"5382"	"5373"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.3"	""	"237.7"	"2.9"	"249.5"	""	"308.1"	""	"316.4"	"358.1"	""	"658"	"24"	"35.000"	"28.000"	"0.127995852703118"	"14"	"0.007522"	"0.09625"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIQHTYR"	"[K].yIQHTYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"403.89056"	"1209.65714"	"1209.65777"	"-0.52"	"-0.00021"	"5/56"	"5"	"56"	"18185793.9616699"	"HCD"	"MS2"	"8.548619"	"405.4"	"77.606"	"25.1899"	"5345"	"5345"	"5337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"561.3"	""	"537.9"	""	"572.2"	""	"644.7"	"17.7"	"733.0"	"774.7"	""	"660"	"21"	"35.000"	"28.000"	"0.265774885595692"	"14"	"0.003317"	"0.03592"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFESLR"	"[R].lESFESLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"605.33655"	"1209.66582"	"1209.66767"	"-1.53"	"-0.00092"	"6/64"	"6"	"64"	"436677.170593262"	"HCD"	"MS2"	"11.05686"	"29.3"	"100.000"	"90.2174"	"31646"	"31646"	"31625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"42.6"	""	"40.7"	""	"43.9"	""	"58.4"	"60.7"	""	"578"	"20"	"34.000"	"27.000"	"0.323517548322006"	"16"	"0.002525"	"0.02385"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFESLR"	"[R].lESFESLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"605.33710"	"1209.66692"	"1209.66767"	"-0.62"	"-0.00038"	"7/64"	"7"	"64"	"457387.260681152"	"HCD"	"MS2"	"37.17549"	"29.2"	"100.000"	"89.9514"	"31500"	"31500"	"31475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"35.0"	""	"41.3"	""	"61.6"	""	"48.4"	"59.2"	""	"574"	"24"	"34.000"	"27.000"	"0.124704434337241"	"24"	"0.0005161"	"0.006672"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFESLR"	"[R].lESFESLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"605.33716"	"1209.66704"	"1209.66767"	"-0.52"	"-0.00031"	"5/64"	"5"	"64"	"550829.465026855"	"HCD"	"MS2"	"23.04099"	"32.3"	"100.000"	"89.9179"	"31526"	"31526"	"31509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.8"	""	"36.2"	""	"44.8"	""	"57.6"	""	"65.0"	"66.6"	""	"576"	"32"	"34.000"	"27.000"	"0.0174338171929127"	"22"	"0.0001991"	"0.005148"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESFESLR"	"[R].lESFESLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"605.33740"	"1209.66753"	"1209.66767"	"-0.12"	"-0.00007"	"6/64"	"6"	"64"	"507015.94921875"	"HCD"	"MS2"	"25.40871"	"29.8"	"100.000"	"90.2485"	"31620"	"31620"	"31606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"32.6"	""	"44.9"	""	"47.1"	"0.2"	"58.4"	"61.6"	""	"592"	"23"	"34.000"	"27.000"	"0.166453032256343"	"18"	"0.001316"	"0.01044"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYSLDDIR"	"[R].vYSLDDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62724"	"DNA replication licensing factor MCM6 (Fragment) OS=Rattus norvegicus OX=10116 GN=Mcm6 PE=1 SV=2"	"Q62724"	"DNA replication licensing factor MCM6 (Fragment) OS=Rattus norvegicus OX=10116 GN=Mcm6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"605.33777"	"1209.66826"	"1209.66767"	"0.49"	"0.00030"	"4/62"	"4"	"62"	"385082.817504883"	"HCD"	"MS2"	"62.66866"	"27.5"	"100.000"	"80.2136"	"27609"	"27609"	"27584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.4"	""	"38.9"	""	"34.6"	""	"43.2"	""	"47.3"	"49.6"	""	"592"	"15"	"34.000"	"27.000"	"0.946872952468654"	"17"	"0.001217"	"0.009428"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGMTIAK"	"[K].dGmTIAk.[E]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"605.34875"	"1209.69023"	"1209.69133"	"-0.91"	"-0.00055"	"6/54"	"6"	"54"	"4189579.52825928"	"HCD"	"MS2"	"17.35421"	"259.0"	"100.000"	"34.4997"	"9071"	"9071"	"9044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.9"	""	"268.0"	""	"296.2"	""	"632.2"	""	"491.8"	"466.9"	""	"495"	"14"	"33.000"	"26.000"	"0.884250274426024"	"14"	"0.008135"	"0.1043"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDNLGYR"	"[R].mLDNLGYR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4;Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4; Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"605.82623"	"1210.64519"	"1210.64516"	"0.02"	"0.00002"	"6/64"	"6"	"64"	"874982.376708984"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"77.0676"	"26336"	"26336"	"26325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.0"	""	"81.2"	""	"86.1"	""	"65.6"	""	"87.2"	"101.7"	""	"587"	"24"	"34.000"	"27.000"	"0.113137897974904"	"24"	"0.0001686"	"0.001823"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDNLGYR"	"[R].mLDNLGYR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4;Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4; Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"605.82648"	"1210.64568"	"1210.64516"	"0.43"	"0.00026"	"5/64"	"5"	"64"	"1130738.1383667"	"HCD"	"MS2"	"17.33925"	"68.5"	"100.000"	"76.7912"	"26226"	"26226"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.0"	""	"100.9"	""	"114.3"	""	"70.9"	""	"123.4"	"116.1"	""	"581"	"25"	"34.000"	"27.000"	"0.0927141746906771"	"26"	"0.0001991"	"0.002283"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDNLGYR"	"[R].mLDNLGYR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4;Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4; Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"605.82648"	"1210.64568"	"1210.64516"	"0.43"	"0.00026"	"5/64"	"5"	"64"	"1302271.03588867"	"HCD"	"MS2"	"20.49039"	"79.0"	"100.000"	"76.7050"	"26160"	"26160"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.0"	""	"123.1"	""	"121.3"	""	"94.3"	""	"136.9"	"149.1"	""	"581"	"25"	"34.000"	"27.000"	"0.100959254899251"	"26"	"0.0001991"	"0.003455"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDNLGYR"	"[R].mLDNLGYR.[T]"	"N-Term(TMT6plex)"	"2"	"2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4;Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4; Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"605.82654"	"1210.64580"	"1210.64516"	"0.53"	"0.00032"	"6/64"	"6"	"64"	"1040369.25683594"	"HCD"	"MS2"	"0"	"60.1"	"100.000"	"76.9800"	"26270"	"26270"	"26259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.7"	""	"91.7"	""	"97.5"	""	"62.3"	"1.4"	"115.5"	"105.5"	""	"570"	"25"	"34.000"	"27.000"	"0.0932920980404689"	"26"	"0.0001991"	"0.002812"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELYSSNR"	"[R].lELYSSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"605.83356"	"1210.65984"	"1210.66292"	"-2.54"	"-0.00154"	"6/66"	"6"	"66"	"1151374.90441895"	"HCD"	"MS2"	"19.50852"	"89.6"	"100.000"	"56.2595"	"17861"	"17861"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.3"	""	"107.6"	""	"113.0"	""	"121.8"	"0.3"	"195.5"	"191.9"	""	"554"	"31"	"34.000"	"27.000"	"0.0246876509863048"	"19"	"0.001049"	"0.008921"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELYSSNR"	"[R].lELYSSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"605.83362"	"1210.65996"	"1210.66292"	"-2.44"	"-0.00148"	"9/66"	"9"	"66"	"910935.594116211"	"HCD"	"MS2"	"0"	"72.3"	"100.000"	"56.0034"	"17792"	"17792"	"17772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"76.6"	""	"93.2"	""	"102.4"	""	"158.3"	"158.3"	""	"554"	"26"	"34.000"	"27.000"	"0.0649351381843619"	"20"	"0.001488"	"0.01223"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"606.31750"	"1211.62773"	"1211.62917"	"-1.19"	"-0.00072"	"6/68"	"6"	"68"	"2177360.25091553"	"HCD"	"MS2"	"10.16008"	"119.0"	"100.000"	"66.7927"	"22168"	"22168"	"22152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.1"	""	"186.8"	""	"178.9"	""	"136.3"	""	"211.5"	"223.9"	""	"494"	"36"	"33.000"	"26.000"	"0.00568456128899901"	"18"	"0.0001686"	"0.001867"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"606.31787"	"1211.62847"	"1211.62917"	"-0.59"	"-0.00035"	"6/68"	"6"	"68"	"4558653.8861084"	"HCD"	"MS2"	"0.5822989"	"224.4"	"100.000"	"67.3656"	"22401"	"22401"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"364.8"	""	"347.7"	""	"370.5"	""	"230.1"	""	"397.2"	"415.5"	""	"502"	"41"	"33.000"	"27.000"	"0.00181833425978823"	"20"	"9.9E-05"	"0.0009881"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"606.31799"	"1211.62871"	"1211.62917"	"-0.38"	"-0.00023"	"6/68"	"6"	"68"	"10022016.7667847"	"HCD"	"MS2"	"0.4843023"	"447.5"	"100.000"	"67.0903"	"22257"	"22257"	"22240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"727.1"	""	"727.1"	""	"751.6"	""	"476.9"	""	"772.4"	"780.6"	""	"508"	"39"	"34.000"	"27.000"	"0.00354677563708208"	"25"	"0.0001991"	"0.00253"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"606.31805"	"1211.62883"	"1211.62917"	"-0.28"	"-0.00017"	"6/68"	"6"	"68"	"1909686.47290039"	"HCD"	"MS2"	"0"	"109.2"	"100.000"	"66.7776"	"22130"	"22130"	"22107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.9"	""	"165.3"	""	"178.8"	""	"123.4"	""	"197.1"	"190.7"	""	"508"	"42"	"34.000"	"27.000"	"0.00165132941347145"	"22"	"0.0001686"	"0.001848"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"606.31824"	"1211.62920"	"1211.62917"	"0.02"	"0.00001"	"6/68"	"6"	"68"	"9718354.56323242"	"HCD"	"MS2"	"0.2487882"	"457.1"	"100.000"	"67.0800"	"22285"	"22285"	"22270"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"731.3"	""	"768.7"	""	"724.5"	""	"483.5"	""	"798.0"	"826.3"	""	"512"	"39"	"34.000"	"27.000"	"0.00355827873590618"	"24"	"0.0001991"	"0.003283"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEMATR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"606.31848"	"1211.62969"	"1211.62917"	"0.42"	"0.00026"	"6/68"	"6"	"68"	"3904336.50598145"	"HCD"	"MS2"	"0.8112"	"193.7"	"100.000"	"67.3807"	"22376"	"22376"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.7"	""	"306.0"	""	"315.4"	""	"210.5"	""	"354.5"	"349.4"	""	"512"	"39"	"34.000"	"27.000"	"0.00294604899569775"	"24"	"0.0001991"	"0.002702"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"606.32928"	"1211.65129"	"1211.65433"	"-2.50"	"-0.00152"	"6/58"	"6"	"58"	"1326767.77355957"	"HCD"	"MS2"	"30.48116"	"59.2"	"100.000"	"112.0166"	"40340"	"40340"	"40319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.4"	""	"88.8"	""	"84.8"	""	"77.2"	"1.3"	"117.3"	"106.5"	""	"490"	"45"	"33.000"	"26.000"	"0.000778334147309194"	""	"0.002035"	"0.01772"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"606.32935"	"1211.65141"	"1211.65433"	"-2.40"	"-0.00146"	"5/58"	"5"	"58"	"396070.165405273"	"HCD"	"MS2"	"35.4191"	"18.8"	"100.000"	"113.6439"	"40994"	"40994"	"40975"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"17.3"	""	"21.6"	""	"33.5"	""	"38.9"	"40.2"	""	"492"	"22"	"33.000"	"26.000"	"0.141884549994494"	"22"	"0.007412"	"0.09385"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"606.32935"	"1211.65141"	"1211.65433"	"-2.40"	"-0.00146"	"5/58"	"5"	"58"	"473812.883850098"	"HCD"	"MS2"	"21.83507"	"17.8"	"100.000"	"113.4800"	"40914"	"40914"	"40889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.1"	""	"22.9"	""	"23.4"	""	"31.2"	""	"27.2"	"40.6"	""	"492"	"27"	"33.000"	"26.000"	"0.0517529496182554"	"22"	"0.007178"	"0.0918"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"606.32941"	"1211.65154"	"1211.65433"	"-2.30"	"-0.00140"	"6/58"	"6"	"58"	"412897.38458252"	"HCD"	"MS2"	"14.06525"	"21.1"	"100.000"	"112.8849"	"40674"	"40674"	"40649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"30.4"	""	"23.7"	""	"35.5"	""	"39.2"	"45.0"	""	"492"	"52"	"33.000"	"26.000"	"0.00015557331543855"	""	"0.001453"	"0.01194"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"606.32947"	"1211.65166"	"1211.65433"	"-2.20"	"-0.00133"	"6/58"	"6"	"58"	"572237.000427246"	"HCD"	"MS2"	"35.29015"	"27.9"	"100.000"	"112.6941"	"40616"	"40616"	"40591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"32.2"	""	"36.6"	""	"45.7"	""	"56.2"	"49.1"	""	"492"	"44"	"33.000"	"26.000"	"0.000939582906266516"	"26"	"0.0005778"	"0.007083"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"606.32959"	"1211.65190"	"1211.65433"	"-2.00"	"-0.00121"	"6/58"	"6"	"58"	"1030383.00054932"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"112.4234"	"40492"	"40492"	"40473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.6"	""	"61.9"	""	"66.5"	""	"76.8"	""	"70.1"	"96.2"	""	"485"	"36"	"33.000"	"26.000"	"0.00658736522693478"	"26"	"0.004959"	"0.06159"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"606.32983"	"1211.65239"	"1211.65433"	"-1.60"	"-0.00097"	"5/58"	"5"	"58"	"278841.437438965"	"HCD"	"MS2"	"52.46867"	"10.8"	"100.000"	"113.9587"	"41109"	"41109"	"41081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"13.5"	""	"11.7"	""	"20.8"	""	"19.5"	"22.6"	""	"481"	"34"	"33.000"	"26.000"	"0.0103303510636955"	"22"	"0.003529"	"0.03884"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"606.32990"	"1211.65251"	"1211.65433"	"-1.50"	"-0.00091"	"6/58"	"6"	"58"	"727141.648376465"	"HCD"	"MS2"	"19.91905"	"35.7"	"100.000"	"111.5966"	"40156"	"40156"	"40135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.5"	""	"47.8"	""	"48.3"	""	"44.0"	""	"83.4"	"75.5"	""	"481"	"45"	"33.000"	"26.000"	"0.000760527777270495"	""	"0.001774"	"0.01526"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"606.32990"	"1211.65251"	"1211.65433"	"-1.50"	"-0.00091"	"6/58"	"6"	"58"	"742873.154174805"	"HCD"	"MS2"	"21.44633"	"36.8"	"100.000"	"111.6888"	"40207"	"40207"	"40188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"49.7"	""	"55.0"	""	"54.7"	"1.8"	"74.3"	"66.8"	""	"481"	"45"	"33.000"	"26.000"	"0.000778242744915757"	""	"0.002328"	"0.02232"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"606.33008"	"1211.65288"	"1211.65433"	"-1.20"	"-0.00072"	"6/58"	"6"	"58"	"556086.833496094"	"HCD"	"MS2"	"3.540376"	"29.3"	"100.000"	"110.9423"	"39903"	"39903"	"39884"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"28.6"	""	"32.4"	""	"75.0"	""	"57.1"	"52.2"	""	"517"	"48"	"34.000"	"27.000"	"0.000365982692118906"	"26"	"0.0007633"	"0.007327"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"606.33020"	"1211.65312"	"1211.65433"	"-0.99"	"-0.00060"	"6/58"	"6"	"58"	"365731.586303711"	"HCD"	"MS2"	"6.052744"	"22.1"	"100.000"	"111.0187"	"39921"	"39921"	"39895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"26.7"	""	"28.8"	""	"40.6"	"0.3"	"42.1"	"47.1"	""	"517"	"52"	"34.000"	"27.000"	"0.000157565287936584"	""	"0.0001991"	"0.003443"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"606.33026"	"1211.65325"	"1211.65433"	"-0.89"	"-0.00054"	"5/58"	"5"	"58"	"234628.269226074"	"HCD"	"MS2"	"31.75153"	"10.0"	"100.000"	"113.9840"	"41133"	"41133"	"41103"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"13.0"	""	"14.0"	""	"13.9"	""	"21.6"	"19.5"	""	"517"	"31"	"34.000"	"27.000"	"0.0211086542996196"	"21"	"0.002628"	"0.02783"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"606.33051"	"1211.65373"	"1211.65433"	"-0.49"	"-0.00030"	"6/58"	"6"	"58"	"1928948.77722168"	"HCD"	"MS2"	"0"	"75.3"	"100.000"	"112.0672"	"40347"	"40347"	"40329"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.2"	""	"96.5"	""	"90.9"	""	"118.3"	""	"130.1"	"157.0"	""	"496"	"38"	"33.000"	"26.000"	"0.00434962364456757"	"23"	"0.002525"	"0.02454"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"606.33063"	"1211.65398"	"1211.65433"	"-0.29"	"-0.00017"	"5/58"	"5"	"58"	"402912.489196777"	"HCD"	"MS2"	"12.87376"	"17.6"	"100.000"	"113.0222"	"40743"	"40743"	"40719"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"23.7"	""	"28.6"	""	"26.7"	""	"27.7"	"35.5"	""	"496"	"39"	"33.000"	"26.000"	"0.00336086974263057"	""	"0.002373"	"0.02262"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"606.33063"	"1211.65398"	"1211.65433"	"-0.29"	"-0.00017"	"6/58"	"6"	"58"	"1475222.51977539"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"110.6811"	"39784"	"39784"	"39767"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.0"	""	"69.0"	""	"68.1"	""	"188.2"	"0.1"	"108.3"	"106.4"	""	"496"	"49"	"33.000"	"26.000"	"0.000282131566884211"	"26"	"0.0001991"	"0.002902"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33075"	"1211.65422"	"1211.65433"	"-0.09"	"-0.00005"	"6/58"	"6"	"58"	"3739118.31091309"	"HCD"	"MS2"	"0.1768202"	"148.1"	"100.000"	"110.3671"	"39656"	"39656"	"39639"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"142.1"	""	"142.7"	""	"169.2"	""	"447.2"	""	"263.7"	"239.9"	""	"503"	"53"	"34.000"	"27.000"	"0.000128096714070885"	"27"	"9.9E-05"	"0.0009029"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVSEFLK"	"[M].amVSEFLk.[Q]"	"N-Term(Prot)(Acetyl); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"606.33081"	"1211.65434"	"1211.65433"	"0.01"	"0.00001"	"6/58"	"6"	"58"	"5645035.93560791"	"HCD"	"MS2"	"0"	"220.1"	"100.000"	"110.5821"	"39757"	"39757"	"39740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.3"	""	"227.5"	""	"240.9"	""	"690.7"	""	"372.0"	"339.2"	""	"503"	"53"	"34.000"	"27.000"	"0.000125180876872202"	"27"	"0.0001991"	"0.002674"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGSALYASR"	"[K].sAGSALYASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"606.33197"	"1211.65666"	"1211.65817"	"-1.24"	"-0.00075"	"8/88"	"8"	"88"	"2323691.01757813"	"HCD"	"MS2"	"7.560322"	"148.7"	"100.000"	"34.2588"	"8937"	"8937"	"8914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.7"	""	"222.4"	""	"221.4"	""	"251.0"	"2.4"	"242.3"	"247.1"	""	"511"	"39"	"34.000"	"27.000"	"0.00294029499375303"	"22"	"0"	"6.289E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSATNYITR"	"[R].gSATNYITR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B8N8"	"Pescadillo homolog OS=Rattus norvegicus OX=10116 GN=Pes1 PE=2 SV=1"	"Q3B8N8"	"Pescadillo homolog OS=Rattus norvegicus OX=10116 GN=Pes1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.33240"	"1211.65752"	"1211.65817"	"-0.54"	"-0.00032"	"7/84"	"7"	"84"	"632984.276428223"	"HCD"	"MS2"	"100"	"49.7"	"100.000"	"36.1243"	"9729"	"9729"	"9706"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.3"	""	"70.0"	""	"66.8"	""	"77.5"	""	"90.7"	"95.7"	""	"497"	"11"	"33.000"	"26.000"	"2.14450169120092"	"13"	"0.003317"	"0.03705"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGSALYASR"	"[K].sAGSALYASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"Q5XIC1"	"Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus OX=10116 GN=Gmppa PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"606.33270"	"1211.65813"	"1211.65817"	"-0.03"	"-0.00002"	"8/88"	"8"	"88"	"2550079.07397461"	"HCD"	"MS2"	"24.30618"	"156.6"	"100.000"	"34.1276"	"8920"	"8920"	"8900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.8"	""	"211.2"	""	"231.7"	""	"271.2"	"0.1"	"254.8"	"275.4"	""	"496"	"42"	"33.000"	"26.000"	"0.00152915560461648"	"23"	"0"	"4.23E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEFVGR"	"[K].eVFEFVGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVQ8"	"NLR family member X1 OS=Rattus norvegicus OX=10116 GN=Nlrx1 PE=2 SV=1"	"Q5FVQ8"	"NLR family member X1 OS=Rattus norvegicus OX=10116 GN=Nlrx1 PE=2 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"606.33484"	"1211.66240"	"1211.66219"	"0.17"	"0.00011"	"6/62"	"6"	"62"	"391444.928710938"	"HCD"	"MS2"	"21.84383"	"24.4"	"100.000"	"97.0450"	"34368"	"34368"	"34349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"34.3"	""	"31.9"	""	"38.2"	""	"49.3"	"47.9"	""	"485"	"21"	"33.000"	"26.000"	"0.20403832184896"	"16"	"0.0001991"	"0.005521"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELHR"	"[K].lSLDELHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"404.56912"	"1211.69281"	"1211.69455"	"-1.43"	"-0.00058"	"11/62"	"11"	"62"	"1519171.28741455"	"HCD"	"MS2"	"1.390042"	"36.7"	"100.000"	"61.8981"	"20183"	"20183"	"20161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.6"	""	"45.4"	""	"48.1"	""	"68.9"	""	"76.5"	"78.5"	""	"414"	"45"	"33.000"	"26.000"	"0.000679157256744155"	"26"	"0"	"0.0002702"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELHR"	"[K].lSLDELHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"404.56915"	"1211.69291"	"1211.69455"	"-1.36"	"-0.00055"	"10/62"	"10"	"62"	"1169977.97436523"	"HCD"	"MS2"	"10.60012"	"29.1"	"100.000"	"61.3511"	"19932"	"19932"	"19912"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"39.1"	""	"35.0"	""	"56.0"	""	"56.4"	"57.5"	""	"414"	"46"	"33.000"	"26.000"	"0.000566200626345489"	""	"0"	"0.000342"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELHR"	"[K].lSLDELHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7556"	"0.0000"	"1"	"1"	"1"	"404.56915"	"1211.69291"	"1211.69455"	"-1.36"	"-0.00055"	"11/62"	"11"	"62"	"6079032.73602295"	"HCD"	"MS2"	"4.951732"	"119.3"	"100.000"	"61.5848"	"20056"	"20056"	"20038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.8"	""	"125.9"	""	"145.3"	""	"219.3"	""	"247.1"	"266.0"	""	"414"	"45"	"33.000"	"26.000"	"0.000625130006123217"	"26"	"0"	"0.0003236"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELHR"	"[K].lSLDELHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.6735"	"0.0000"	"1"	"1"	"1"	"404.56921"	"1211.69309"	"1211.69455"	"-1.21"	"-0.00049"	"11/62"	"11"	"62"	"1108609.29327393"	"HCD"	"MS2"	"23.34595"	"31.8"	"100.000"	"61.2887"	"19938"	"19938"	"19916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"36.9"	""	"42.3"	""	"55.4"	""	"69.5"	"65.1"	""	"414"	"49"	"33.000"	"26.000"	"0.000237667799649855"	""	"9.9E-05"	"0.0004696"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELHR"	"[K].lSLDELHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"404.56927"	"1211.69327"	"1211.69455"	"-1.06"	"-0.00043"	"10/62"	"10"	"62"	"1627223.6885376"	"HCD"	"MS2"	"2.515774"	"39.4"	"100.000"	"61.9486"	"20170"	"20170"	"20151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.2"	"2.0"	"45.8"	""	"53.7"	""	"64.3"	"0.9"	"76.2"	"82.8"	""	"406"	"46"	"33.000"	"26.000"	"0.000519392935041846"	"23"	"0"	"0.0002538"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSLDELHR"	"[K].lSLDELHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"404.56940"	"1211.69364"	"1211.69455"	"-0.75"	"-0.00030"	"11/62"	"11"	"62"	"5895890.82263184"	"HCD"	"MS2"	"4.805092"	"115.6"	"100.000"	"61.6633"	"20055"	"20055"	"20037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.1"	""	"133.8"	""	"136.3"	""	"195.7"	""	"259.0"	"253.4"	""	"393"	"41"	"32.000"	"25.000"	"0.00152884182279321"	"25"	"9.9E-05"	"0.0006752"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"606.37866"	"1211.75005"	"1211.75123"	"-0.97"	"-0.00059"	"6/60"	"6"	"60"	"5813171.93243408"	"HCD"	"MS2"	"33.68276"	"354.5"	"100.000"	"38.4087"	"10617"	"10617"	"10594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"586.7"	""	"552.3"	""	"361.2"	""	"693.5"	"0.9"	"613.7"	"545.8"	""	"196"	"29"	"29.000"	"22.000"	"0.0117550931708639"	""	"0.001488"	"0.01284"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"404.58829"	"1211.75031"	"1211.75123"	"-0.76"	"-0.00031"	"7/60"	"7"	"60"	"5702185.63031006"	"HCD"	"MS2"	"54.78796"	"275.9"	"100.000"	"38.4430"	"10667"	"10667"	"10644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"423.9"	""	"408.7"	""	"312.6"	""	"507.0"	""	"525.6"	"437.7"	""	"194"	"13"	"29.000"	"22.000"	"0.495189849976144"	"20"	"0.007443"	"0.09497"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"606.37903"	"1211.75078"	"1211.75123"	"-0.37"	"-0.00022"	"10/60"	"10"	"60"	"7623962.73168945"	"HCD"	"MS2"	"23.04113"	"433.9"	"100.000"	"38.3328"	"10622"	"10622"	"10596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"734.5"	""	"701.5"	""	"456.8"	""	"784.3"	"2.6"	"748.0"	"676.7"	""	"194"	"23"	"29.000"	"22.000"	"0.0473992788562549"	"21"	"0.002419"	"0.02291"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"606.37909"	"1211.75090"	"1211.75123"	"-0.27"	"-0.00016"	"9/60"	"9"	"60"	"3927699.24884033"	"HCD"	"MS2"	"4.588181"	"253.4"	"100.000"	"38.6270"	"10742"	"10742"	"10723"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"404.6"	""	"375.2"	""	"280.7"	""	"446.1"	"2.4"	"470.8"	"420.3"	""	"194"	"26"	"29.000"	"22.000"	"0.0223754477305847"	"22"	"0.001348"	"0.01107"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQPIPNK"	"[K].gQPIPNk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"606.37927"	"1211.75127"	"1211.75123"	"0.03"	"0.00002"	"10/60"	"10"	"60"	"4888836.20385742"	"HCD"	"MS2"	"0"	"298.7"	"100.000"	"38.7074"	"10739"	"10739"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"472.4"	""	"445.9"	""	"321.1"	""	"543.6"	""	"547.5"	"500.4"	""	"194"	"22"	"29.000"	"22.000"	"0.0563341484995673"	"22"	"0.002328"	"0.02223"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASEATYR"	"[R].wASEATYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"606.81378"	"1212.62029"	"1212.62105"	"-0.63"	"-0.00038"	"6/62"	"6"	"62"	"3151102.77911377"	"HCD"	"MS2"	"49.19434"	"199.1"	"100.000"	"48.7867"	"14826"	"14826"	"14803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.2"	""	"299.9"	""	"274.8"	""	"279.7"	""	"354.6"	"374.7"	""	"490"	"11"	"33.000"	"26.000"	"1.8078653638163"	"17"	"0.004819"	"0.05788"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WASEATYR"	"[R].wASEATYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"606.81445"	"1212.62163"	"1212.62105"	"0.48"	"0.00029"	"6/62"	"6"	"62"	"3247535.07421875"	"HCD"	"MS2"	"51.22306"	"196.8"	"100.000"	"48.4495"	"14725"	"14725"	"14702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"290.1"	""	"272.1"	""	"253.6"	""	"310.0"	"0.5"	"368.0"	"370.5"	""	"473"	"17"	"33.000"	"26.000"	"0.421532578501473"	"19"	"0.001049"	"0.008856"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVNSHLAR"	"[K].wVnSHLAR.[V]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"404.89377"	"1212.66675"	"1212.66867"	"-1.58"	"-0.00064"	"6/66"	"6"	"66"	"1067139.84802246"	"HCD"	"MS2"	"80.10081"	"52.8"	"100.000"	"50.0754"	"15350"	"15350"	"15324"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.3"	""	"69.9"	""	"76.6"	""	"80.7"	"0.8"	"92.0"	"119.2"	""	"508"	"6"	"34.000"	"27.000"	"6.06504065859947"	"13"	"0.003818"	"0.04111"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGYSAK"	"[R].aASGYSAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"606.85272"	"1212.69817"	"1212.69886"	"-0.57"	"-0.00035"	"11/62"	"11"	"62"	"2547694.72332764"	"HCD"	"MS2"	"10.8682"	"222.8"	"100.000"	"29.9933"	"7260"	"7260"	"7238"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"414.4"	""	"322.8"	""	"306.2"	""	"314.5"	""	"359.4"	"391.8"	""	"408"	"40"	"33.000"	"26.000"	"0.00204"	"19"	"0.0001686"	"0.001718"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGYSAK"	"[R].aASGYSAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"606.85297"	"1212.69866"	"1212.69886"	"-0.17"	"-0.00010"	"11/62"	"11"	"62"	"2214494.94360352"	"HCD"	"MS2"	"0"	"187.9"	"100.000"	"30.1137"	"7268"	"7268"	"7250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.8"	""	"276.6"	""	"247.2"	""	"272.2"	""	"303.6"	"334.7"	""	"408"	"38"	"33.000"	"26.000"	"0.00310191696065429"	"17"	"9.9E-05"	"0.0006598"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"404.91583"	"1212.73294"	"1212.73524"	"-1.90"	"-0.00077"	"5/60"	"5"	"60"	"397391.106994629"	"HCD"	"MS2"	"22.17903"	"29.1"	"100.000"	"48.8417"	"14849"	"14849"	"14819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.0"	""	"31.1"	""	"44.5"	""	"47.8"	"0.6"	"64.5"	"49.3"	""	"307"	"11"	"31.000"	"24.000"	"1.24196220523882"	"13"	"0.002559"	"0.02533"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.87054"	"1212.73381"	"1212.73524"	"-1.18"	"-0.00072"	"3/60"	"3"	"60"	"3303171.75073242"	"HCD"	"MS2"	"58.36522"	"190.7"	"100.000"	"48.7430"	"14808"	"14808"	"14787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"278.6"	""	"264.8"	""	"266.6"	""	"285.0"	""	"342.9"	"373.1"	""	"315"	"9"	"31.000"	"24.000"	"2.13934367837477"	"13"	"0.005832"	"0.0718"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"404.91614"	"1212.73386"	"1212.73524"	"-1.14"	"-0.00046"	"5/60"	"5"	"60"	"3825044.07232666"	"HCD"	"MS2"	"16.47977"	"195.5"	"100.000"	"48.1928"	"14622"	"14622"	"14605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"251.2"	""	"231.5"	"2.8"	"273.6"	""	"334.7"	""	"381.3"	"381.6"	""	"315"	"22"	"31.000"	"24.000"	"0.10599382336478"	"18"	"0.001261"	"0.009912"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"404.91623"	"1212.73413"	"1212.73524"	"-0.91"	"-0.00037"	"4/60"	"4"	"60"	"4240049.9006958"	"HCD"	"MS2"	"32.90025"	"203.1"	"100.000"	"47.9108"	"14507"	"14507"	"14490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"277.8"	""	"256.0"	""	"259.1"	""	"370.3"	""	"397.9"	"365.9"	""	"313"	"25"	"31.000"	"24.000"	"0.0458684792881675"	"18"	"0.001488"	"0.01274"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"606.87073"	"1212.73418"	"1212.73524"	"-0.88"	"-0.00053"	"6/60"	"6"	"60"	"11464748.4287109"	"HCD"	"MS2"	"5.728848"	"560.0"	"100.000"	"48.1263"	"14595"	"14595"	"14577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"772.1"	""	"680.8"	""	"783.4"	""	"968.8"	""	"1040.0"	"1069.1"	""	"307"	"30"	"31.000"	"24.000"	"0.0160734232125813"	"22"	"0.001615"	"0.01426"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"606.87079"	"1212.73430"	"1212.73524"	"-0.78"	"-0.00047"	"6/60"	"6"	"60"	"3404728.28582764"	"HCD"	"MS2"	"9.95106"	"199.0"	"100.000"	"48.1204"	"14555"	"14555"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"286.7"	""	"245.8"	""	"288.3"	""	"364.0"	""	"341.2"	"360.1"	""	"307"	"31"	"31.000"	"24.000"	"0.0123625590724057"	""	"0.001348"	"0.01074"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"606.87097"	"1212.73467"	"1212.73524"	"-0.48"	"-0.00029"	"6/60"	"6"	"60"	"11282369.0386353"	"HCD"	"MS2"	"2.177737"	"600.5"	"100.000"	"48.4282"	"14680"	"14680"	"14663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"808.9"	""	"738.6"	""	"833.0"	""	"1040.2"	""	"1128.5"	"1148.0"	""	"304"	"30"	"31.000"	"24.000"	"0.0162122610426999"	"22"	"0.001615"	"0.01372"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"404.91644"	"1212.73478"	"1212.73524"	"-0.39"	"-0.00016"	"5/60"	"5"	"60"	"3364867.42388916"	"HCD"	"MS2"	"42.84563"	"161.1"	"100.000"	"48.1896"	"14583"	"14583"	"14557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.9"	""	"208.0"	""	"215.8"	""	"267.2"	""	"309.9"	"296.4"	""	"304"	"20"	"31.000"	"24.000"	"0.138625647582098"	"17"	"0.001453"	"0.01196"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"606.87134"	"1212.73540"	"1212.73524"	"0.13"	"0.00008"	"6/60"	"6"	"60"	"3318453.27246094"	"HCD"	"MS2"	"0"	"194.3"	"100.000"	"47.8095"	"14466"	"14466"	"14442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"294.6"	""	"264.0"	""	"252.8"	""	"342.3"	"1.8"	"350.8"	"333.7"	""	"304"	"30"	"31.000"	"24.000"	"0.0168983222546802"	"21"	"0.001348"	"0.01058"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPADLPK"	"[K].nPADLPk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"404.91666"	"1212.73542"	"1212.73524"	"0.14"	"0.00006"	"4/60"	"4"	"60"	"4009947.8649292"	"HCD"	"MS2"	"6.204953"	"209.0"	"100.000"	"48.4947"	"14707"	"14707"	"14694"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.8"	""	"263.3"	""	"300.4"	""	"349.6"	""	"400.9"	"398.1"	""	"304"	"28"	"31.000"	"24.000"	"0.0230591655853819"	"19"	"0.0005161"	"0.006797"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"607.32367"	"1213.64006"	"1213.64145"	"-1.15"	"-0.00070"	"7/62"	"7"	"62"	"2994320.37591553"	"HCD"	"MS2"	"22.38538"	"133.3"	"100.000"	"77.6837"	"26551"	"26551"	"26540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.2"	""	"166.7"	""	"162.3"	""	"225.2"	""	"261.5"	"266.0"	""	"430"	"29"	"33.000"	"26.000"	"0.0262082763768846"	"22"	"0.0001686"	"0.001907"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"607.32391"	"1213.64055"	"1213.64145"	"-0.74"	"-0.00045"	"11/62"	"11"	"62"	"3341146.49169922"	"HCD"	"MS2"	"22.4091"	"152.3"	"100.000"	"77.8059"	"26629"	"26629"	"26612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.0"	""	"195.1"	""	"194.2"	""	"248.6"	""	"294.4"	"304.8"	""	"441"	"28"	"33.000"	"26.000"	"0.0371884942098217"	"21"	"0.0001991"	"0.003306"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"607.32397"	"1213.64067"	"1213.64145"	"-0.64"	"-0.00039"	"11/62"	"11"	"62"	"2512720.73620605"	"HCD"	"MS2"	"18.93191"	"113.9"	"100.000"	"77.9715"	"26668"	"26668"	"26653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.4"	""	"147.9"	""	"150.4"	""	"184.7"	""	"215.5"	"231.2"	""	"436"	"28"	"33.000"	"26.000"	"0.0331479361481684"	"21"	"0.0001991"	"0.002285"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFFSEVER"	"[R].aFFSEVER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"607.32410"	"1213.64092"	"1213.64145"	"-0.44"	"-0.00027"	"6/62"	"6"	"62"	"2285576.890625"	"HCD"	"MS2"	"17.96034"	"104.4"	"100.000"	"78.0867"	"26743"	"26743"	"26726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.2"	""	"136.6"	""	"146.4"	""	"164.1"	""	"197.9"	"206.3"	""	"438"	"32"	"33.000"	"26.000"	"0.0141073069147824"	"21"	"0.0001686"	"0.001181"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTPHYPR"	"[R].vDTPHYPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"P09215"	"Protein kinase C delta type OS=Rattus norvegicus OX=10116 GN=Prkcd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"405.22198"	"1213.65140"	"1213.65269"	"-1.06"	"-0.00043"	"7/58"	"7"	"58"	"1993111.45135498"	"HCD"	"MS2"	"27.63896"	"104.0"	"100.000"	"31.8618"	"8004"	"8004"	"7979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.9"	""	"145.8"	""	"140.9"	""	"165.8"	"4.3"	"181.1"	"212.5"	""	"442"	"20"	"33.000"	"26.000"	"0.238447225612792"	"14"	"0.001488"	"0.01238"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGGQLASPR"	"[R].qAGGQLASPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"607.34491"	"1213.68254"	"1213.68505"	"-2.07"	"-0.00125"	"8/90"	"8"	"90"	"1055871.34613037"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"25.8416"	"5569"	"5569"	"5542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.1"	""	"58.9"	""	"93.2"	""	"89.9"	""	"98.0"	"100.5"	""	"488"	"36"	"33.000"	"26.000"	"0.00684525807660217"	"16"	"0"	"5.408E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVQPELVS"	"[R].vNVQPELVS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"607.35315"	"1213.69902"	"1213.69897"	"0.04"	"0.00003"	"5/74"	"5"	"74"	"854254.838500977"	"HCD"	"MS2"	"35.15601"	"22.0"	"100.000"	"90.7576"	"31862"	"31862"	"31849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"32.0"	""	"31.2"	""	"28.9"	"0.6"	"40.9"	"41.0"	""	"479"	"29"	"33.000"	"26.000"	"0.0283991615186035"	"22"	"0.001162"	"0.009245"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNVQPELVS"	"[R].vNVQPELVS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"607.35352"	"1213.69975"	"1213.69897"	"0.65"	"0.00039"	"5/74"	"5"	"74"	"862669.863830566"	"HCD"	"MS2"	"33.22635"	"22.1"	"100.000"	"90.8439"	"31859"	"31859"	"31839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"28.9"	""	"30.9"	""	"38.5"	"1.3"	"44.0"	"36.6"	""	"479"	"29"	"33.000"	"26.000"	"0.0303602621872954"	"22"	"0.001261"	"0.01022"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVVVEGVR"	"[K].nIVVVEGVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"607.37634"	"1213.74541"	"1213.74659"	"-0.97"	"-0.00059"	"7/80"	"7"	"80"	"1692840.08575439"	"HCD"	"MS2"	"32.73318"	"80.5"	"100.000"	"64.5698"	"21268"	"21268"	"21243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.1"	""	"133.6"	""	"113.6"	""	"122.0"	"1.7"	"137.0"	"132.3"	""	"338"	"44"	"32.000"	"25.000"	"0.000696444807274487"	"20"	"0"	"0.0001591"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIVVVEGVR"	"[K].nIVVVEGVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"607.37701"	"1213.74675"	"1213.74659"	"0.14"	"0.00008"	"7/80"	"7"	"80"	"1592101.31848145"	"HCD"	"MS2"	"45.20891"	"79.1"	"100.000"	"64.5848"	"21240"	"21240"	"21217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.9"	""	"121.3"	""	"123.0"	""	"118.4"	""	"129.2"	"136.4"	""	"297"	"44"	"31.000"	"24.000"	"0.000630560052460275"	"17"	"0"	"0.0001269"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGWPLDIR"	"[K].eGWPLDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"607.83954"	"1214.67180"	"1214.67309"	"-1.06"	"-0.00064"	"8/66"	"8"	"66"	"5272973.14685059"	"HCD"	"MS2"	"6.139491"	"174.0"	"100.000"	"100.0980"	"35605"	"35605"	"35588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.0"	""	"243.1"	""	"251.2"	""	"239.1"	"0.4"	"281.9"	"269.4"	""	"562"	"35"	"34.000"	"27.000"	"0.0080298294268836"	""	"0.001488"	"0.0122"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGWPLDIR"	"[K].eGWPLDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4412"	"0.0000"	"1"	"1"	"1"	"607.83997"	"1214.67266"	"1214.67309"	"-0.36"	"-0.00022"	"6/66"	"6"	"66"	"5703173.98748779"	"HCD"	"MS2"	"3.35341"	"195.3"	"100.000"	"100.2122"	"35679"	"35679"	"35665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"409.1"	""	"287.8"	"2.2"	"265.6"	""	"271.2"	"1.2"	"288.7"	"317.6"	""	"569"	"34"	"34.000"	"27.000"	"0.0120526423841095"	""	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGWPLDIR"	"[K].eGWPLDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"607.84052"	"1214.67375"	"1214.67309"	"0.55"	"0.00033"	"8/66"	"8"	"66"	"3721566.16442871"	"HCD"	"MS2"	"4.321715"	"134.3"	"100.000"	"100.3935"	"35725"	"35725"	"35708"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"257.2"	""	"195.1"	""	"179.0"	""	"196.8"	""	"220.9"	"221.1"	""	"549"	"36"	"34.000"	"27.000"	"0.00754296945026608"	""	"0.0001686"	"0.00183"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGWPLDIR"	"[K].eGWPLDIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"607.84058"	"1214.67388"	"1214.67309"	"0.65"	"0.00039"	"8/66"	"8"	"66"	"2972838.36035156"	"HCD"	"MS2"	"4.280017"	"108.5"	"100.000"	"100.5146"	"35802"	"35802"	"35785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.6"	""	"151.8"	""	"162.5"	""	"158.0"	""	"166.5"	"172.7"	""	"549"	"36"	"34.000"	"27.000"	"0.00773646114632092"	""	"0.0009352"	"0.008156"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDISPLTPR"	"[K].sDISPLTPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"607.84833"	"1214.68938"	"1214.69422"	"-3.98"	"-0.00242"	"7/76"	"7"	"76"	"2143104.2744751"	"HCD"	"MS2"	"41.14455"	"131.7"	"100.000"	"51.3682"	"15874"	"15874"	"15853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.6"	""	"146.1"	""	"168.8"	""	"249.5"	""	"281.8"	"266.7"	""	"522"	"32"	"34.000"	"27.000"	"0.0155110253398664"	"23"	"0"	"0.0002115"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDISPLTPR"	"[K].sDISPLTPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"607.84900"	"1214.69072"	"1214.69422"	"-2.88"	"-0.00175"	"6/76"	"6"	"76"	"2519081.9284668"	"HCD"	"MS2"	"38.49301"	"153.5"	"100.000"	"51.0244"	"15771"	"15771"	"15750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.2"	""	"179.3"	""	"194.8"	""	"295.2"	"1.1"	"320.5"	"288.0"	""	"525"	"26"	"34.000"	"27.000"	"0.0611123955137065"	"21"	"0.0001991"	"0.002218"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTGVLPER"	"[K].tLTGVLPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"607.86841"	"1214.72954"	"1214.73060"	"-0.88"	"-0.00053"	"6/78"	"6"	"78"	"556919.271240234"	"HCD"	"MS2"	"42.98433"	"29.8"	"100.000"	"69.6722"	"23305"	"23305"	"23283"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"36.4"	""	"39.9"	""	"50.6"	"0.0"	"57.0"	"54.6"	""	"510"	"23"	"34.000"	"27.000"	"0.124893598938954"	"18"	"0.0001991"	"0.00297"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTGVLPER"	"[K].tLTGVLPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"607.86847"	"1214.72966"	"1214.73060"	"-0.78"	"-0.00047"	"12/78"	"12"	"78"	"497499.434997559"	"HCD"	"MS2"	"30.37811"	"27.9"	"100.000"	"69.7731"	"23380"	"23380"	"23356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.9"	""	"36.4"	""	"37.1"	""	"40.8"	"0.6"	"53.0"	"51.3"	""	"510"	"14"	"34.000"	"27.000"	"1.07532608374288"	"15"	"0.001049"	"0.008626"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELLQVLR"	"[R].dELLQVLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P61023"	"Calcineurin B homologous protein 1 OS=Rattus norvegicus OX=10116 GN=Chp1 PE=1 SV=2"	"P61023"	"Calcineurin B homologous protein 1 OS=Rattus norvegicus OX=10116 GN=Chp1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"607.86890"	"1214.73052"	"1214.73060"	"-0.07"	"-0.00004"	"6/64"	"6"	"64"	"314115.459472656"	"HCD"	"MS2"	"58.7328"	"17.2"	"100.000"	"103.2198"	"36866"	"36866"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"19.7"	""	"16.8"	""	"32.1"	""	"37.4"	"34.4"	""	"487"	"12"	"33.000"	"26.000"	"1.57942484568996"	"19"	"0.002328"	"0.02207"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTGVLPER"	"[K].tLTGVLPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"607.86896"	"1214.73064"	"1214.73060"	"0.03"	"0.00002"	"7/78"	"7"	"78"	"1006704.84454346"	"HCD"	"MS2"	"24.81373"	"44.5"	"100.000"	"69.4574"	"23252"	"23252"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.5"	""	"60.9"	""	"65.4"	""	"69.1"	""	"96.8"	"68.9"	""	"483"	"26"	"33.000"	"26.000"	"0.0544398769734811"	"17"	"0.0001686"	"0.001465"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTGVLPER"	"[K].tLTGVLPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"Q5FWT7"	"Ubiquitin-like domain-containing CTD phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ublcp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"607.86908"	"1214.73088"	"1214.73060"	"0.23"	"0.00014"	"7/78"	"7"	"78"	"894604.716247559"	"HCD"	"MS2"	"15.12721"	"42.6"	"100.000"	"69.3523"	"23175"	"23175"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.7"	""	"55.0"	""	"63.7"	""	"69.2"	"1.9"	"81.4"	"68.2"	""	"483"	"25"	"33.000"	"26.000"	"0.0699708476429869"	"18"	"0.0001991"	"0.00284"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLLDQGGLR"	"[R].lLLDqGGLR.[L]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q5PQP9"	"Armadillo repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Armc5 PE=2 SV=1"	"Q5PQP9"	"Armadillo repeat-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Armc5 PE=2 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"3"	"607.86932"	"1214.73137"	"1214.73060"	"0.63"	"0.00038"	"3/72"	"3"	"72"	"469055.373413086"	"HCD"	"MS2"	"36.06716"	"24.6"	"100.000"	"95.9366"	"33952"	"33952"	"33933"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.3"	""	"32.4"	""	"28.2"	""	"41.3"	""	"47.6"	"55.5"	""	"483"	"6"	"33.000"	"26.000"	"5.92812203137934"	"18"	"0.008522"	"0.1082"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELLQVLR"	"[R].dELLQVLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P61023"	"Calcineurin B homologous protein 1 OS=Rattus norvegicus OX=10116 GN=Chp1 PE=1 SV=2"	"P61023"	"Calcineurin B homologous protein 1 OS=Rattus norvegicus OX=10116 GN=Chp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"607.86963"	"1214.73198"	"1214.73060"	"1.13"	"0.00069"	"5/64"	"5"	"64"	"279041.743347168"	"HCD"	"MS2"	"59.25952"	"17.1"	"100.000"	"103.3982"	"36955"	"36955"	"36927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"20.4"	""	"21.6"	""	"32.4"	""	"36.0"	"32.6"	""	"493"	"3"	"33.000"	"26.000"	"13.0863015502939"	"13"	"0.00511"	"0.06562"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIEGLIER"	"[K].rIEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"405.58496"	"1214.74033"	"1214.74184"	"-1.24"	"-0.00050"	"7/78"	"7"	"78"	"1583080.20220947"	"HCD"	"MS2"	"26.07932"	"62.9"	"100.000"	"45.3904"	"13485"	"13485"	"13464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.1"	""	"79.3"	""	"84.4"	""	"106.6"	"0.3"	"110.9"	"118.2"	""	"451"	"45"	"33.000"	"26.000"	"0.000698468051973338"	""	"0.0001991"	"0.004248"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIEGLIER"	"[K].rIEGLIER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"405.58514"	"1214.74088"	"1214.74184"	"-0.79"	"-0.00032"	"7/78"	"7"	"78"	"1523791.42596436"	"HCD"	"MS2"	"18.70421"	"64.8"	"100.000"	"45.6791"	"13569"	"13569"	"13541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.7"	""	"79.5"	""	"78.4"	""	"107.1"	"0.5"	"112.2"	"132.0"	""	"451"	"39"	"33.000"	"26.000"	"0.00311994218458136"	""	"0.001872"	"0.01576"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEFSHR"	"[R].lTPEFSHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"405.89401"	"1215.66748"	"1215.66834"	"-0.70"	"-0.00028"	"6/64"	"6"	"64"	"6354619.9552002"	"HCD"	"MS2"	"0"	"101.5"	"100.000"	"39.0517"	"10880"	"10880"	"10857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.1"	""	"117.3"	""	"157.2"	""	"165.2"	""	"190.3"	"189.0"	""	"633"	"27"	"35.000"	"28.000"	"0.0668919281108299"	""	"0.001596"	"0.01298"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEFSHR"	"[R].lTPEFSHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"0.3929"	"0.0000"	"1"	"1"	"1"	"405.89435"	"1215.66849"	"1215.66834"	"0.13"	"0.00005"	"9/64"	"9"	"64"	"6469723.12921143"	"HCD"	"MS2"	"12.62747"	"94.5"	"100.000"	"38.9827"	"10888"	"10888"	"10861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.6"	""	"112.6"	""	"134.1"	""	"157.2"	""	"178.5"	"186.1"	""	"593"	"28"	"34.000"	"27.000"	"0.0427587201727124"	""	"0.0001991"	"0.003168"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPVMVAGGR"	"[R].sPPVmVAGGR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"608.33856"	"1215.66985"	"1215.67171"	"-1.53"	"-0.00093"	"9/72"	"9"	"72"	"1001448.98840332"	"HCD"	"MS2"	"0"	"44.0"	"100.000"	"34.1280"	"8884"	"8884"	"8863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.0"	""	"36.8"	""	"48.1"	""	"108.2"	""	"100.0"	"91.1"	""	"609"	"39"	"34.000"	"27.000"	"0.00350418718433581"	"17"	"0.004234"	"0.04827"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPVMVAGGR"	"[R].sPPVmVAGGR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"608.33911"	"1215.67095"	"1215.67171"	"-0.63"	"-0.00038"	"8/72"	"8"	"72"	"1049631.23937988"	"HCD"	"MS2"	"15.54969"	"43.0"	"100.000"	"33.9854"	"8863"	"8863"	"8844"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"32.4"	""	"49.9"	""	"108.5"	"0.0"	"94.2"	"82.2"	""	"618"	"31"	"34.000"	"27.000"	"0.0255834128587111"	"20"	"0.004234"	"0.04783"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADQAEAR"	"[K].lLADQAEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"608.34839"	"1215.68950"	"1215.68947"	"0.03"	"0.00002"	"7/78"	"7"	"78"	"5675375.32537842"	"HCD"	"MS2"	"0"	"237.6"	"100.000"	"44.6114"	"13134"	"13134"	"13121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"294.5"	""	"258.4"	""	"297.1"	""	"453.7"	""	"501.2"	"450.9"	""	"573"	"47"	"34.000"	"27.000"	"0.000554784892670703"	"26"	"0"	"0.0002236"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLADQAEAR"	"[K].lLADQAEAR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"P84100"	"60S ribosomal protein L19 OS=Rattus norvegicus OX=10116 GN=Rpl19 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"608.34851"	"1215.68974"	"1215.68947"	"0.23"	"0.00014"	"7/78"	"7"	"78"	"5590816.57427979"	"HCD"	"MS2"	"0"	"238.0"	"100.000"	"44.4143"	"13089"	"13089"	"13077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.8"	""	"273.8"	""	"314.1"	""	"444.9"	""	"475.5"	"443.6"	""	"572"	"52"	"34.000"	"27.000"	"0.000188523734039876"	"26"	"0"	"0.0001653"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"608.35162"	"1215.69597"	"1215.69686"	"-0.73"	"-0.00044"	"10/62"	"10"	"62"	"874806.435241699"	"HCD"	"MS2"	"4.007542"	"44.4"	"100.000"	"92.7097"	"32617"	"32617"	"32597"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.9"	""	"62.8"	""	"64.5"	""	"66.2"	""	"80.2"	"83.4"	""	"600"	"23"	"34.000"	"27.000"	"0.162226296883674"	"19"	"0.001872"	"0.01573"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"608.35181"	"1215.69634"	"1215.69686"	"-0.43"	"-0.00026"	"6/62"	"6"	"62"	"4034419.54736328"	"HCD"	"MS2"	"0"	"163.9"	"100.000"	"92.3287"	"32498"	"32498"	"32481"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.7"	""	"239.7"	""	"256.6"	""	"224.0"	"0.8"	"302.8"	"278.4"	""	"578"	"36"	"34.000"	"27.000"	"0.00690077460761908"	"22"	"0.0001686"	"0.001653"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"608.35199"	"1215.69670"	"1215.69686"	"-0.13"	"-0.00008"	"6/62"	"6"	"62"	"626503.307556152"	"HCD"	"MS2"	"9.045214"	"35.6"	"100.000"	"92.6696"	"32636"	"32636"	"32620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"52.7"	""	"50.4"	""	"53.0"	""	"60.5"	"66.0"	""	"587"	"28"	"34.000"	"27.000"	"0.0514763927290557"	"25"	"0.0001991"	"0.002605"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"608.35217"	"1215.69707"	"1215.69686"	"0.17"	"0.00010"	"6/62"	"6"	"62"	"3782665.53344727"	"HCD"	"MS2"	"0.6392775"	"149.0"	"100.000"	"92.3986"	"32490"	"32490"	"32473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.0"	""	"226.2"	""	"222.5"	""	"203.5"	"1.1"	"263.1"	"252.5"	""	"587"	"38"	"34.000"	"27.000"	"0.00432123719464003"	"22"	"0.0001686"	"0.001162"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPELIDIR"	"[R].mPELIDIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"P18163"	"Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"608.35266"	"1215.69805"	"1215.69686"	"0.97"	"0.00059"	"5/62"	"5"	"62"	"282154.548828125"	"HCD"	"MS2"	"19.64696"	"14.1"	"100.000"	"105.7281"	"37868"	"37868"	"37856"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"19.9"	""	"19.4"	""	"18.9"	""	"26.4"	"20.2"	""	"567"	"20"	"34.000"	"27.000"	"0.253252104638389"	"20"	"0.008485"	"0.1078"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"608.35266"	"1215.69805"	"1215.69686"	"0.97"	"0.00059"	"6/62"	"6"	"62"	"783071.57019043"	"HCD"	"MS2"	"39.23728"	"32.8"	"100.000"	"92.0990"	"32369"	"32369"	"32350"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.4"	""	"44.0"	""	"54.0"	""	"41.4"	"0.3"	"64.4"	"57.6"	""	"567"	"12"	"34.000"	"27.000"	"1.70040770118437"	"15"	"0.003001"	"0.03238"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].eMVELPLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"608.35291"	"1215.69853"	"1215.69686"	"1.38"	"0.00084"	"5/62"	"5"	"62"	"869727.981506348"	"HCD"	"MS2"	"44.87783"	"40.2"	"100.000"	"92.0313"	"32377"	"32377"	"32358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"58.8"	""	"61.1"	""	"68.0"	"1.1"	"65.1"	"71.2"	""	"562"	"18"	"34.000"	"27.000"	"0.424332523320125"	"20"	"0.0001686"	"0.001689"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLANQTVGR"	"[KR].qLANQTVGR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37; F1LQX4"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1; Rho GTPase-activating protein 44 OS=Rattus norvegicus OX=10116 GN=Arhgap44 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"608.35394"	"1215.70061"	"1215.70070"	"-0.07"	"-0.00005"	"7/80"	"7"	"80"	"994492.418640137"	"HCD"	"MS2"	"0"	"57.1"	"100.000"	"29.4934"	"7059"	"7059"	"7030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"67.8"	""	"73.8"	""	"105.1"	""	"106.9"	"110.4"	""	"551"	"38"	"34.000"	"27.000"	"0.00450942951653361"	"27"	"0"	"0.0002415"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLANQTVGR"	"[KR].qLANQTVGR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37; F1LQX4"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1; Rho GTPase-activating protein 44 OS=Rattus norvegicus OX=10116 GN=Arhgap44 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"608.35425"	"1215.70122"	"1215.70070"	"0.43"	"0.00026"	"6/80"	"6"	"80"	"818539.055358887"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"29.6643"	"7088"	"7088"	"7063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.7"	""	"63.5"	""	"66.5"	""	"82.9"	""	"110.5"	"94.2"	""	"542"	"27"	"34.000"	"27.000"	"0.0506954860039132"	"23"	"0.001261"	"0.009902"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDGITIQAR"	"[R].iDGITIQAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"608.36615"	"1215.72502"	"1215.72585"	"-0.68"	"-0.00041"	"14/74"	"14"	"74"	"3858499.65899658"	"HCD"	"MS2"	"0.5809686"	"167.9"	"100.000"	"74.6733"	"25365"	"25365"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.4"	""	"215.0"	""	"215.1"	""	"207.8"	""	"328.3"	"415.3"	""	"613"	"49"	"34.000"	"27.000"	"0.000412506198518148"	""	"0"	"0.0003092"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDGITIQAR"	"[R].iDGITIQAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"608.36633"	"1215.72539"	"1215.72585"	"-0.38"	"-0.00023"	"7/74"	"7"	"74"	"1029427.61444092"	"HCD"	"MS2"	"5.695272"	"49.2"	"100.000"	"74.3621"	"25239"	"25239"	"25217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.7"	""	"65.9"	""	"58.0"	""	"71.4"	"1.6"	"92.6"	"107.9"	""	"613"	"45"	"34.000"	"27.000"	"0.00097147242742283"	""	"0"	"8.885E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDGITIQAR"	"[R].iDGITIQAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"608.36652"	"1215.72576"	"1215.72585"	"-0.08"	"-0.00005"	"7/74"	"7"	"74"	"932479.126037598"	"HCD"	"MS2"	"24.96852"	"49.5"	"100.000"	"74.2551"	"25166"	"25166"	"25142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.7"	""	"67.2"	""	"65.0"	""	"74.2"	"1.2"	"89.9"	"101.7"	""	"613"	"45"	"34.000"	"27.000"	"0.00101491688734414"	""	"0"	"0.0001737"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDGITIQAR"	"[R].iDGITIQAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"608.36652"	"1215.72576"	"1215.72585"	"-0.08"	"-0.00005"	"7/74"	"7"	"74"	"3810033.38726807"	"HCD"	"MS2"	"1.318753"	"156.2"	"100.000"	"74.5593"	"25288"	"25288"	"25275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.9"	""	"211.3"	""	"194.0"	""	"216.0"	""	"291.9"	"370.7"	""	"613"	"46"	"34.000"	"27.000"	"0.000787826307418657"	""	"0"	"0.0002781"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IDGITIQAR"	"[R].iDGITIQAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"608.36688"	"1215.72649"	"1215.72585"	"0.52"	"0.00032"	"13/74"	"13"	"74"	"1659085.00640869"	"HCD"	"MS2"	"4.863406"	"79.8"	"100.000"	"74.9845"	"25491"	"25491"	"25472"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.6"	""	"95.9"	""	"113.8"	""	"112.4"	""	"156.2"	"185.3"	""	"613"	"31"	"34.000"	"27.000"	"0.026027381559863"	""	"9.9E-05"	"0.0006267"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPELGVK"	"[R].dPELGVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"405.91595"	"1215.73331"	"1215.73491"	"-1.32"	"-0.00053"	"5/52"	"5"	"52"	"860525.378845215"	"HCD"	"MS2"	"23.4772"	"52.1"	"100.000"	"53.7089"	"16861"	"16861"	"16832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"50.8"	""	"59.8"	""	"101.4"	""	"129.8"	"96.0"	""	"654"	"27"	"35.000"	"28.000"	"0.0686353341944892"	""	"0.00212"	"0.01939"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPELGVK"	"[R].dPELGVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"608.37061"	"1215.73393"	"1215.73491"	"-0.80"	"-0.00049"	"5/52"	"5"	"52"	"2090486.04644775"	"HCD"	"MS2"	"0"	"146.6"	"100.000"	"53.8791"	"16897"	"16897"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.4"	""	"197.2"	""	"197.3"	""	"264.2"	""	"287.8"	"245.4"	""	"650"	"23"	"35.000"	"28.000"	"0.164014921708147"	"24"	"0.002525"	"0.02473"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPELGVK"	"[R].dPELGVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"405.91617"	"1215.73395"	"1215.73491"	"-0.79"	"-0.00032"	"5/52"	"5"	"52"	"669947.391113281"	"HCD"	"MS2"	"34.26562"	"43.0"	"100.000"	"53.9941"	"16944"	"16944"	"16920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"45.5"	""	"55.4"	""	"88.5"	""	"89.7"	"80.0"	""	"650"	"22"	"35.000"	"28.000"	"0.186587850217381"	"25"	"0.003818"	"0.04171"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPPTVK"	"[R].tDPPTVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"608.37067"	"1215.73406"	"1215.73491"	"-0.70"	"-0.00043"	"6/56"	"6"	"56"	"5144799.03973389"	"HCD"	"MS2"	"2.610543"	"305.0"	"100.000"	"38.8543"	"10835"	"10835"	"10814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"454.9"	""	"406.3"	""	"393.1"	""	"542.6"	""	"574.6"	"519.0"	""	"641"	"35"	"35.000"	"28.000"	"0.00943687133632503"	"21"	"0.001488"	"0.01278"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"608.37073"	"1215.73418"	"1215.73491"	"-0.60"	"-0.00037"	"12/52"	"12"	"52"	"1003460.51934814"	"HCD"	"MS2"	"9.881818"	"73.5"	"100.000"	"70.0796"	"23505"	"23505"	"23481"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.7"	""	"99.4"	""	"87.9"	""	"128.5"	""	"137.2"	"133.8"	""	"641"	"30"	"35.000"	"28.000"	"0.0329479223549535"	""	"0.0005161"	"0.006588"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDPEGK"	"[K].vLDPEGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"608.37073"	"1215.73418"	"1215.73491"	"-0.60"	"-0.00037"	"6/52"	"6"	"52"	"2498753.53985596"	"HCD"	"MS2"	"0"	"172.0"	"100.000"	"55.9821"	"17752"	"17752"	"17739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.5"	""	"71.0"	""	"72.7"	""	"129.9"	""	"150.6"	"1151.8"	""	"641"	"25"	"35.000"	"28.000"	"0.109857075588137"	""	"0.00212"	"0.01902"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLAVDK"	"[K].dPLAVDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"608.37073"	"1215.73418"	"1215.73491"	"-0.60"	"-0.00037"	"6/58"	"6"	"58"	"9328136.61413574"	"HCD"	"MS2"	"62.68231"	"597.0"	"100.000"	"61.9932"	"20188"	"20188"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"652.3"	""	"723.6"	""	"724.5"	""	"1107.1"	""	"1228.2"	"1253.3"	""	"641"	"22"	"35.000"	"28.000"	"0.212729654063812"	"19"	"0.004234"	"0.04834"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLAVDK"	"[K].dPLAVDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"P05943"	"Protein S100-A10 OS=Rattus norvegicus OX=10116 GN=S100a10 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"608.37079"	"1215.73430"	"1215.73491"	"-0.50"	"-0.00030"	"6/58"	"6"	"58"	"8008070.18566895"	"HCD"	"MS2"	"61.29517"	"520.4"	"100.000"	"61.9984"	"20224"	"20224"	"20208"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"554.4"	""	"594.6"	""	"622.7"	""	"977.3"	""	"1065.9"	"1139.7"	""	"641"	"21"	"35.000"	"28.000"	"0.242564942854222"	"18"	"0.004114"	"0.04445"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"608.37085"	"1215.73442"	"1215.73491"	"-0.40"	"-0.00024"	"12/52"	"12"	"52"	"1063184.04968262"	"HCD"	"MS2"	"10.12406"	"81.4"	"100.000"	"70.0042"	"23440"	"23440"	"23416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.2"	""	"93.1"	""	"104.8"	""	"157.5"	"0.2"	"141.2"	"149.6"	""	"641"	"30"	"35.000"	"28.000"	"0.033637834838307"	""	"0.001049"	"0.00879"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPPTVK"	"[R].tDPPTVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"Q63678"	"Zinc-alpha-2-glycoprotein OS=Rattus norvegicus OX=10116 GN=Azgp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"608.37085"	"1215.73442"	"1215.73491"	"-0.40"	"-0.00024"	"6/56"	"6"	"56"	"5321711.90447998"	"HCD"	"MS2"	"0"	"325.6"	"100.000"	"38.9373"	"10833"	"10833"	"10813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"468.9"	""	"429.2"	""	"451.8"	""	"553.1"	"0.1"	"619.4"	"562.0"	""	"641"	"38"	"35.000"	"28.000"	"0.00468627784413378"	"22"	"0.001488"	"0.01207"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDPEGK"	"[K].vLDPEGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"608.37091"	"1215.73454"	"1215.73491"	"-0.30"	"-0.00018"	"5/52"	"5"	"52"	"719108.813842773"	"HCD"	"MS2"	"0"	"60.4"	"100.000"	"56.2731"	"17867"	"17867"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.7"	""	"48.7"	""	"56.4"	""	"74.5"	""	"83.1"	"264.3"	""	"640"	"16"	"35.000"	"28.000"	"0.875285992418146"	"22"	"0.008926"	"0.1158"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPELGVK"	"[R].dPELGVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"608.37091"	"1215.73454"	"1215.73491"	"-0.30"	"-0.00018"	"5/52"	"5"	"52"	"2954320.17755127"	"HCD"	"MS2"	"10.64563"	"201.5"	"100.000"	"53.5893"	"16812"	"16812"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.2"	""	"256.2"	""	"254.1"	""	"378.7"	""	"391.1"	"379.1"	""	"640"	"24"	"35.000"	"28.000"	"0.131567910753447"	"28"	"0.002525"	"0.02398"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"608.37103"	"1215.73479"	"1215.73491"	"-0.10"	"-0.00006"	"6/52"	"6"	"52"	"3680431.47540283"	"HCD"	"MS2"	"0"	"238.9"	"100.000"	"70.2809"	"23553"	"23553"	"23541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"355.5"	""	"286.2"	""	"307.1"	""	"404.1"	""	"465.1"	"450.0"	""	"640"	"29"	"35.000"	"28.000"	"0.0417974684202189"	""	"0.00192"	"0.01616"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"608.37115"	"1215.73503"	"1215.73491"	"0.10"	"0.00006"	"6/52"	"6"	"52"	"1235329.06707764"	"HCD"	"MS2"	"3.912582"	"89.2"	"100.000"	"70.6419"	"23732"	"23732"	"23715"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.9"	""	"110.0"	""	"121.5"	""	"147.2"	"1.1"	"174.7"	"174.0"	""	"640"	"36"	"35.000"	"28.000"	"0.00728031177847062"	""	"0.0004582"	"0.00647"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"608.37115"	"1215.73503"	"1215.73491"	"0.10"	"0.00006"	"6/52"	"6"	"52"	"3941283.98248291"	"HCD"	"MS2"	"1.413088"	"278.1"	"100.000"	"70.3609"	"23618"	"23618"	"23604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.7"	""	"322.4"	""	"366.0"	""	"495.9"	""	"523.6"	"531.4"	""	"640"	"29"	"35.000"	"28.000"	"0.041893821535981"	""	"0.001596"	"0.01295"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDPEGK"	"[K].vLDPEGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"608.37152"	"1215.73577"	"1215.73491"	"0.70"	"0.00043"	"6/52"	"6"	"52"	"2396919.89788818"	"HCD"	"MS2"	"0"	"176.5"	"100.000"	"55.6529"	"17653"	"17653"	"17637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.1"	""	"67.6"	""	"68.3"	""	"116.6"	""	"157.4"	"1206.0"	""	"640"	"26"	"35.000"	"28.000"	"0.0776515230426373"	"26"	"0.001999"	"0.01752"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPIGK"	"[K].dLDPIGk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"608.37164"	"1215.73601"	"1215.73491"	"0.90"	"0.00055"	"6/52"	"6"	"52"	"1078684.35186768"	"HCD"	"MS2"	"3.215806"	"77.9"	"100.000"	"70.5781"	"23673"	"23673"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.7"	""	"95.6"	""	"111.5"	""	"120.3"	""	"157.7"	"151.1"	""	"640"	"28"	"35.000"	"28.000"	"0.0507165821587556"	""	"0.001103"	"0.009107"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGAHLDFR"	"[R].nGGAHLDFR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"406.21365"	"1216.62641"	"1216.62720"	"-0.65"	"-0.00026"	"9/80"	"9"	"80"	"1002199.56939697"	"HCD"	"MS2"	"71.03681"	"35.4"	"100.000"	"40.1062"	"11339"	"11339"	"11311"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"44.1"	""	"47.9"	""	"63.6"	""	"60.2"	"79.0"	""	"457"	"21"	"33.000"	"26.000"	"0.176151442681222"	"19"	"0.0001991"	"0.005388"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVMS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"608.82074"	"1216.63420"	"1216.63459"	"-0.32"	"-0.00020"	"7/64"	"7"	"64"	"1466197.55358887"	"HCD"	"MS2"	"7.244081"	"33.0"	"100.000"	"68.5036"	"22863"	"22863"	"22842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.3"	""	"45.5"	""	"46.9"	""	"54.6"	"2.1"	"54.6"	"63.9"	""	"508"	"38"	"34.000"	"27.000"	"0.00379169780033065"	"16"	"0.001488"	"0.01218"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVMS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"608.82080"	"1216.63432"	"1216.63459"	"-0.22"	"-0.00013"	"7/64"	"7"	"64"	"2029401.91741943"	"HCD"	"MS2"	"2.450676"	"34.8"	"100.000"	"68.1902"	"22735"	"22735"	"22714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"45.8"	""	"51.1"	""	"44.5"	"1.7"	"64.3"	"74.3"	""	"512"	"36"	"34.000"	"27.000"	"0.00695408452822805"	"16"	"0.001488"	"0.01216"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVMS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"608.82092"	"1216.63457"	"1216.63459"	"-0.02"	"-0.00001"	"6/64"	"6"	"64"	"1933384.21899414"	"HCD"	"MS2"	"5.54119"	"36.0"	"100.000"	"68.1200"	"22674"	"22674"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.5"	""	"40.7"	""	"52.9"	""	"47.5"	"1.9"	"65.1"	"76.8"	""	"507"	"35"	"34.000"	"27.000"	"0.00803485351881524"	"20"	"0.001316"	"0.01047"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVMS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"608.82117"	"1216.63506"	"1216.63459"	"0.38"	"0.00023"	"7/64"	"7"	"64"	"1728104.99511719"	"HCD"	"MS2"	"4.647184"	"35.3"	"100.000"	"68.4334"	"22802"	"22802"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.7"	""	"48.2"	""	"53.0"	""	"51.0"	"1.8"	"69.1"	"62.0"	""	"503"	"40"	"34.000"	"27.000"	"0.00272607618876333"	"15"	"0.002166"	"0.01968"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTNAYSR"	"[R].yLTNAYSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"608.82935"	"1216.65141"	"1216.65235"	"-0.77"	"-0.00047"	"6/72"	"6"	"72"	"3904434.27490234"	"HCD"	"MS2"	"10.90318"	"214.3"	"100.000"	"46.0127"	"13705"	"13705"	"13685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.5"	""	"310.9"	""	"342.8"	""	"316.3"	""	"347.4"	"345.2"	""	"650"	"36"	"35.000"	"28.000"	"0.00797780397597635"	"15"	"0.0001991"	"0.00479"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTNAYSR"	"[R].yLTNAYSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"608.82959"	"1216.65190"	"1216.65235"	"-0.37"	"-0.00022"	"6/72"	"6"	"72"	"3558089.20635986"	"HCD"	"MS2"	"6.973006"	"191.7"	"100.000"	"45.7056"	"13614"	"13614"	"13592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"290.4"	""	"285.4"	""	"295.3"	""	"281.6"	""	"320.4"	"342.0"	""	"644"	"36"	"35.000"	"28.000"	"0.00772424199924275"	"18"	"0.0001991"	"0.004335"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0417"	"0.0000"	"1"	"1"	"1"	"608.83856"	"1216.66985"	"1216.67348"	"-2.99"	"-0.00182"	"7/68"	"7"	"68"	"2051651.97235107"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"46.7586"	"14038"	"14038"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.3"	""	"129.2"	""	"141.5"	""	"211.8"	""	"235.8"	"246.1"	""	"652"	"24"	"35.000"	"28.000"	"0.122805438468754"	""	"0.00212"	"0.01929"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ALQLEEER"	"[K].aLQLEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	""	"0.0417"	"2"	"2"	"2"	"608.83856"	"1216.66985"	"1216.67348"	"-2.99"	"-0.00182"	"6/70"	"6"	"70"	"2051651.97235107"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"46.7586"	"14038"	"14038"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.3"	""	"129.2"	""	"141.5"	""	"211.8"	""	"235.8"	"246.1"	""	"652"	"23"	"35.000"	"28.000"	"0.178738290564198"	""	"0.006237"	"0.07572"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"608.83923"	"1216.67119"	"1216.67348"	"-1.88"	"-0.00115"	"6/68"	"6"	"68"	"5910018.12469482"	"HCD"	"MS2"	"1.891341"	"253.5"	"100.000"	"47.3194"	"14228"	"14228"	"14212"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.4"	""	"237.0"	""	"276.8"	""	"524.4"	""	"500.8"	"539.7"	""	"639"	"32"	"35.000"	"28.000"	"0.0212554773406457"	""	"0.0001991"	"0.005872"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"608.83948"	"1216.67168"	"1216.67348"	"-1.48"	"-0.00090"	"6/68"	"6"	"68"	"5547921.96838379"	"HCD"	"MS2"	"1.885016"	"218.1"	"100.000"	"47.0618"	"14162"	"14162"	"14145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"290.6"	""	"203.3"	""	"222.4"	""	"467.9"	"4.5"	"436.9"	"445.4"	""	"713"	"26"	"35.000"	"28.000"	"0.0935533910716554"	""	"0.001348"	"0.01143"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"608.84052"	"1216.67375"	"1216.67348"	"0.22"	"0.00014"	"5/68"	"5"	"68"	"1397922.065979"	"HCD"	"MS2"	"41.40581"	"91.8"	"100.000"	"46.7354"	"14029"	"14029"	"14003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.8"	""	"101.8"	""	"105.8"	""	"159.0"	""	"191.5"	"189.6"	""	"716"	"16"	"35.000"	"28.000"	"0.854836439282918"	"28"	"0.00296"	"0.032"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQER"	"[R].aLELEQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"608.84058"	"1216.67388"	"1216.67348"	"0.32"	"0.00020"	"5/68"	"5"	"68"	"1177039.24401855"	"HCD"	"MS2"	"100"	"79.5"	"100.000"	"47.0324"	"14112"	"14112"	"14086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.0"	""	"87.6"	""	"97.2"	""	"143.2"	""	"171.7"	"163.7"	""	"716"	"19"	"35.000"	"28.000"	"0.48181800675203"	"26"	"0.0001991"	"0.005662"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVLNTEAR"	"[R].nAVLNTEAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIA1"	"Nicalin OS=Rattus norvegicus OX=10116 GN=Ncln PE=2 SV=1"	"Q5XIA1"	"Nicalin OS=Rattus norvegicus OX=10116 GN=Ncln PE=2 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"608.84442"	"1216.68157"	"1216.68472"	"-2.59"	"-0.00157"	"6/82"	"6"	"82"	"376885.276489258"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"33.0580"	"8449"	"8449"	"8419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"30.1"	""	"43.8"	""	"47.9"	"2.3"	"50.5"	"58.1"	""	"756"	"45"	"35.000"	"28.000"	"0.00127201373223936"	"23"	"0.0001686"	"0.00125"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTDELLALGR"	"[K].TKTDELLALGR.[E]"	""	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"1"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"608.85779"	"1216.70830"	"1216.68958"	"15.39"	"0.00936"	"9/106"	"9"	"106"	"586164.217224121"	"HCD"	"MS2"	"52.03053"	"25.9"	"100.000"	"91.3646"	"32107"	"32107"	"32084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.7"	""	"34.1"	""	"31.4"	""	"42.0"	"1.2"	"53.8"	"52.8"	"NoQuanLabels"	"909"	"36"	"36.000"	"29.000"	"0.0119821261485763"	"20"	"0.002525"	"0.02417"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTDELLALGR"	"[K].TKTDELLALGR.[E]"	""	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"1"	"2"	"2"	"0.2600"	"0.0000"	"1"	"1"	"1"	"608.85815"	"1216.70903"	"1216.68958"	"15.99"	"0.00973"	"8/106"	"8"	"106"	"734386.640319824"	"HCD"	"MS2"	"8.365749"	"37.7"	"100.000"	"91.7530"	"32228"	"32228"	"32211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"47.5"	""	"46.7"	""	"56.5"	""	"84.2"	"76.2"	"NoQuanLabels"	"847"	"50"	"36.000"	"29.000"	"0.000443458940099556"	"24"	"0.0001991"	"0.003369"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTDELLALGR"	"[K].TKTDELLALGR.[E]"	""	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"1"	"2"	"2"	"0.2407"	"0.0000"	"1"	"1"	"1"	"608.85822"	"1216.70915"	"1216.68958"	"16.09"	"0.00979"	"8/106"	"8"	"106"	"716531.991394043"	"HCD"	"MS2"	"13.7379"	"38.7"	"100.000"	"91.6554"	"32224"	"32224"	"32210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.1"	""	"42.8"	""	"49.4"	""	"59.3"	""	"76.3"	"83.4"	"NoQuanLabels"	"828"	"54"	"36.000"	"29.000"	"0.000172583924756719"	"26"	"0.001951"	"0.01717"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"608.85828"	"1216.70928"	"1216.70987"	"-0.49"	"-0.00030"	"6/74"	"6"	"74"	"309341.706176758"	"HCD"	"MS2"	"10.78992"	"22.5"	"100.000"	"82.6838"	"28579"	"28579"	"28555"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"32.5"	""	"32.1"	""	"31.3"	""	"39.5"	"48.3"	""	"828"	"22"	"36.000"	"29.000"	"0.281838514499209"	"23"	"0.00329"	"0.0355"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"608.85852"	"1216.70976"	"1216.70987"	"-0.09"	"-0.00005"	"7/74"	"7"	"74"	"2475743.13061523"	"HCD"	"MS2"	"0"	"149.9"	"100.000"	"82.3076"	"28459"	"28459"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.1"	""	"261.1"	""	"228.8"	""	"175.1"	""	"235.3"	"318.9"	""	"828"	"40"	"36.000"	"29.000"	"0.00435512215762814"	"28"	"0"	"0.0003438"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"608.85858"	"1216.70989"	"1216.70987"	"0.02"	"0.00001"	"7/74"	"7"	"74"	"622253.153320313"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"82.6043"	"28575"	"28575"	"28553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"52.6"	""	"52.6"	""	"47.4"	""	"54.4"	"64.8"	""	"826"	"38"	"36.000"	"29.000"	"0.00702991463967115"	""	"9.9E-05"	"0.0009672"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAAVDELR"	"[R].lTAAVDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"Q9WVK3"	"Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Pecr PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"608.85858"	"1216.70989"	"1216.70987"	"0.02"	"0.00001"	"13/74"	"13"	"74"	"2051296.82537842"	"HCD"	"MS2"	"0"	"100.5"	"100.000"	"82.3536"	"28449"	"28449"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.5"	""	"152.1"	""	"152.7"	""	"127.0"	"4.4"	"167.1"	"177.6"	""	"826"	"54"	"36.000"	"29.000"	"0.000174160655916004"	""	"0"	"0.0001208"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAVEK"	"[R].iAQAVEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"608.88678"	"1216.76628"	"1216.76654"	"-0.21"	"-0.00013"	"6/56"	"6"	"56"	"1959650.59588623"	"HCD"	"MS2"	"5.735077"	"145.2"	"100.000"	"49.9386"	"15329"	"15329"	"15308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.6"	""	"102.6"	""	"102.0"	""	"77.3"	""	"93.3"	"786.0"	""	"384"	"36"	"32.000"	"25.000"	"0.00436818706708237"	""	"0.0006415"	"0.007215"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGAEIAK"	"[K].gLGAEIAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"608.88684"	"1216.76641"	"1216.76654"	"-0.11"	"-0.00007"	"14/56"	"14"	"56"	"992391.751220703"	"HCD"	"MS2"	"33.30683"	"92.6"	"100.000"	"60.1285"	"19467"	"19467"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.8"	""	"129.9"	""	"142.0"	""	"138.6"	""	"154.4"	"178.6"	""	"384"	"55"	"32.000"	"25.000"	"6.34309518790684E-05"	""	"0"	"0.0002142"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAVEK"	"[R].iAQAVEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"608.88696"	"1216.76665"	"1216.76654"	"0.09"	"0.00005"	"12/56"	"12"	"56"	"1889822.19897461"	"HCD"	"MS2"	"2.614293"	"136.6"	"100.000"	"50.2873"	"15436"	"15436"	"15414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.8"	""	"92.4"	""	"100.9"	""	"72.0"	""	"88.3"	"744.1"	""	"384"	"40"	"32.000"	"25.000"	"0.00202442284107122"	""	"0.000264"	"0.006"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGAEIAK"	"[K].gLGAEIAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"608.88715"	"1216.76702"	"1216.76654"	"0.39"	"0.00024"	"12/56"	"12"	"56"	"909694.096252441"	"HCD"	"MS2"	"52.53477"	"83.7"	"100.000"	"60.2344"	"19477"	"19477"	"19451"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.7"	""	"118.3"	""	"125.9"	""	"121.0"	""	"157.7"	"140.9"	""	"384"	"45"	"32.000"	"25.000"	"0.00062273206531075"	""	"0"	"0.0003593"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSGMNMGR"	"[R].fGSGmNmGR.[I]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"609.28278"	"1217.55828"	"1217.56044"	"-1.78"	"-0.00108"	"8/70"	"8"	"70"	"1261659.80358887"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"25.2913"	"5349"	"5349"	"5331"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.9"	""	"53.9"	""	"59.1"	""	"128.7"	"1.0"	"82.3"	"84.4"	""	"168"	"23"	"29.000"	"22.000"	"0.0398363267618606"	"15"	"0.001261"	"0.009798"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTNAYSR"	"[R].yLTnAYSR.[D]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.32086"	"1217.63445"	"1217.63637"	"-1.58"	"-0.00096"	"6/72"	"6"	"72"	"1187127.80212402"	"HCD"	"MS2"	"43.38894"	"94.5"	"100.000"	"48.8236"	"14876"	"14876"	"14850"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.2"	""	"115.8"	""	"124.1"	""	"166.8"	"1.0"	"181.8"	"181.9"	""	"583"	"30"	"34.000"	"27.000"	"0.0327068379429022"	"15"	"0.0008247"	"0.007545"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLTNAYSR"	"[R].yLTnAYSR.[D]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.32092"	"1217.63457"	"1217.63637"	"-1.48"	"-0.00090"	"6/72"	"6"	"72"	"1728859.42138672"	"HCD"	"MS2"	"25.90743"	"120.9"	"100.000"	"49.2319"	"15007"	"15007"	"14982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.0"	""	"152.3"	""	"161.3"	""	"206.4"	"7.5"	"235.3"	"225.9"	""	"590"	"22"	"34.000"	"27.000"	"0.166656407569629"	"14"	"0.0001991"	"0.00405"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"609.33728"	"1217.66728"	"1217.66873"	"-1.19"	"-0.00072"	"8/76"	"8"	"76"	"2950266.20404053"	"HCD"	"MS2"	"0"	"132.3"	"100.000"	"33.0575"	"8486"	"8486"	"8462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.7"	""	"213.0"	""	"208.0"	""	"165.4"	"2.6"	"199.6"	"194.2"	""	"751"	"37"	"35.000"	"28.000"	"0.00795444606285812"	"22"	"9.9E-05"	"0.0004228"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"609.33746"	"1217.66765"	"1217.66873"	"-0.89"	"-0.00054"	"6/76"	"6"	"76"	"3302401.54040527"	"HCD"	"MS2"	"0"	"147.9"	"100.000"	"33.1866"	"8501"	"8501"	"8482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.8"	""	"239.9"	""	"241.3"	""	"183.2"	"3.3"	"210.9"	"228.1"	""	"751"	"36"	"35.000"	"28.000"	"0.0104138169929677"	"23"	"0"	"0.00026"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALDANSR"	"[R].lEALDANSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"609.33746"	"1217.66765"	"1217.66873"	"-0.89"	"-0.00054"	"7/80"	"7"	"80"	"3277997.90960693"	"HCD"	"MS2"	"7.724323"	"177.8"	"100.000"	"52.2132"	"16250"	"16250"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.1"	""	"179.6"	""	"206.7"	""	"355.6"	""	"347.8"	"366.3"	""	"751"	"51"	"35.000"	"28.000"	"0.000305217858819619"	""	"0"	"0.0003793"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"609.33752"	"1217.66777"	"1217.66873"	"-0.79"	"-0.00048"	"5/76"	"5"	"76"	"1418719.00708008"	"HCD"	"MS2"	"12.39188"	"104.8"	"100.000"	"33.4967"	"8627"	"8627"	"8604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.8"	""	"129.4"	""	"128.2"	""	"181.8"	"1.7"	"209.0"	"206.6"	""	"751"	"17"	"35.000"	"28.000"	"0.788151926300633"	"22"	"0.0065"	"0.08044"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALDANSR"	"[R].lEALDANSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.2424"	"0.0000"	"1"	"1"	"1"	"609.33759"	"1217.66789"	"1217.66873"	"-0.69"	"-0.00042"	"8/80"	"8"	"80"	"1811275.85479736"	"HCD"	"MS2"	"8.342379"	"106.1"	"100.000"	"52.7631"	"16441"	"16441"	"16416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.9"	""	"126.5"	""	"129.0"	""	"202.2"	"1.3"	"209.2"	"217.4"	""	"744"	"33"	"35.000"	"28.000"	"0.0200697951575627"	""	"0.0001686"	"0.001391"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVSPTSQR"	"[R].vDVSPTSQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.33795"	"1217.66863"	"1217.66873"	"-0.09"	"-0.00005"	"7/76"	"7"	"76"	"1353742.7008667"	"HCD"	"MS2"	"30.51074"	"97.8"	"100.000"	"33.3998"	"8625"	"8625"	"8607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.9"	""	"105.5"	""	"133.8"	""	"165.1"	"4.6"	"193.3"	"193.8"	""	"733"	"14"	"35.000"	"28.000"	"1.61835568954989"	"20"	"0.008522"	"0.1085"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEALDANSR"	"[R].lEALDANSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"609.33807"	"1217.66887"	"1217.66873"	"0.11"	"0.00007"	"7/80"	"7"	"80"	"2804754.04849243"	"HCD"	"MS2"	"7.317329"	"144.6"	"100.000"	"52.4430"	"16310"	"16310"	"16291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.3"	""	"154.1"	""	"163.1"	""	"281.4"	"1.9"	"285.0"	"282.6"	""	"727"	"49"	"35.000"	"28.000"	"0.000501769680183148"	""	"0"	"0.0002006"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTAYYR"	"[RK].tITTAYYR.[G]"	"N-Term(TMT6plex)"	"2"	"7"	"P35280; P35286"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P63012; Q63942; P70550; Q63941; P35280; P62824; P35286"	"Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"609.33875"	"1217.67021"	"1217.67275"	"-2.09"	"-0.00127"	"6/62"	"6"	"62"	"2631513.04962158"	"HCD"	"MS2"	"38.57186"	"155.5"	"100.000"	"49.0005"	"14947"	"14947"	"14928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.0"	""	"212.8"	""	"206.3"	""	"271.4"	""	"294.9"	"284.1"	""	"823"	"29"	"36.000"	"29.000"	"0.0579922340550601"	"24"	"0.0009352"	"0.008364"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTAYYR"	"[RK].tITTAYYR.[G]"	"N-Term(TMT6plex)"	"2"	"7"	"P35280; P35286"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P63012; Q63942; P70550; Q63941; P35280; P62824; P35286"	"Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"609.33923"	"1217.67119"	"1217.67275"	"-1.28"	"-0.00078"	"6/62"	"6"	"62"	"5932672.3895874"	"HCD"	"MS2"	"5.598471"	"291.3"	"100.000"	"49.2946"	"15067"	"15067"	"15051"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"391.1"	""	"403.0"	""	"419.8"	""	"473.9"	""	"521.1"	"554.3"	""	"836"	"34"	"36.000"	"29.000"	"0.0154588179148151"	"25"	"0.001488"	"0.01272"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTAYYR"	"[RK].tITTAYYR.[G]"	"N-Term(TMT6plex)"	"2"	"7"	"P35280; P35286"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P63012; Q63942; P70550; Q63941; P35280; P62824; P35286"	"Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"609.33942"	"1217.67156"	"1217.67275"	"-0.98"	"-0.00060"	"6/62"	"6"	"62"	"2481403.10113525"	"HCD"	"MS2"	"39.04697"	"157.5"	"100.000"	"49.3215"	"15043"	"15043"	"15026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.5"	""	"211.8"	""	"210.7"	""	"255.7"	""	"294.0"	"318.7"	""	"834"	"30"	"36.000"	"29.000"	"0.0441708803398929"	"19"	"0.001615"	"0.01323"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITTAYYR"	"[RK].tITTAYYR.[G]"	"N-Term(TMT6plex)"	"2"	"7"	"P35280; P35286"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P63012; Q63942; P70550; Q63941; P35280; P62824; P35286"	"Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"609.33990"	"1217.67253"	"1217.67275"	"-0.18"	"-0.00011"	"6/62"	"6"	"62"	"5841513.33929443"	"HCD"	"MS2"	"0"	"280.8"	"100.000"	"49.6203"	"15165"	"15165"	"15148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.0"	""	"399.0"	""	"384.5"	""	"477.3"	""	"510.3"	"528.8"	""	"827"	"35"	"36.000"	"29.000"	"0.0146715336448083"	"22"	"0.001261"	"0.009919"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVPFNEVR"	"[R].qVPFNEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"609.34509"	"1217.68291"	"1217.68399"	"-0.89"	"-0.00054"	"10/70"	"10"	"70"	"1664797.95074463"	"HCD"	"MS2"	"18.91359"	"96.7"	"100.000"	"52.5217"	"16376"	"16376"	"16356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.8"	""	"107.5"	""	"115.3"	""	"165.4"	""	"206.4"	"206.2"	""	"884"	"21"	"36.000"	"29.000"	"0.343892155559593"	""	"0.002755"	"0.02932"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVPFNEVR"	"[R].qVPFNEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"609.34540"	"1217.68352"	"1217.68399"	"-0.38"	"-0.00023"	"5/70"	"5"	"70"	"1672200.78955078"	"HCD"	"MS2"	"49.49829"	"104.6"	"100.000"	"52.8343"	"16470"	"16470"	"16448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.2"	""	"123.0"	""	"134.8"	""	"175.6"	"3.9"	"210.6"	"219.1"	""	"883"	"21"	"36.000"	"29.000"	"0.352314654428811"	""	"0.00981"	"0.1316"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIMTAGPR"	"[K].lNImTAGPR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"609.34589"	"1217.68450"	"1217.68736"	"-2.35"	"-0.00143"	"8/78"	"8"	"78"	"1602261.96728516"	"HCD"	"MS2"	"17.77101"	"78.0"	"100.000"	"49.9536"	"15300"	"15300"	"15278"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.2"	""	"99.2"	""	"114.8"	""	"161.4"	""	"133.1"	"139.7"	""	"874"	"26"	"36.000"	"29.000"	"0.109769437056969"	"20"	"0.001615"	"0.01429"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLNEMNR"	"[K].lVLNEMNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"609.34589"	"1217.68450"	"1217.68736"	"-2.35"	"-0.00143"	"7/64"	"7"	"64"	"2218319.61804199"	"HCD"	"MS2"	"17.84665"	"67.3"	"100.000"	"68.0313"	"22670"	"22670"	"22657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.6"	""	"60.4"	""	"69.4"	""	"113.1"	""	"144.7"	"172.3"	""	"874"	"8"	"36.000"	"29.000"	"7.35328564687794"	"15"	"0.009846"	"0.1329"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLNEMNR"	"[K].lVLNEMNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"609.34613"	"1217.68498"	"1217.68736"	"-1.95"	"-0.00119"	"7/64"	"7"	"64"	"2605510.03710938"	"HCD"	"MS2"	"1.766807"	"92.9"	"100.000"	"67.7260"	"22515"	"22515"	"22499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.3"	""	"81.8"	""	"86.6"	""	"157.6"	"1.4"	"223.0"	"235.9"	""	"904"	"16"	"36.000"	"29.000"	"1.14061330916122"	"19"	"0.002525"	"0.02388"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLNEMNR"	"[K].lVLNEMNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"609.34637"	"1217.68547"	"1217.68736"	"-1.55"	"-0.00094"	"7/64"	"7"	"64"	"2474553.33013916"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"67.7366"	"22551"	"22551"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.3"	""	"85.5"	""	"83.4"	""	"151.2"	"1.4"	"216.2"	"215.4"	""	"905"	"15"	"36.000"	"29.000"	"1.44417087943309"	"20"	"0.001718"	"0.01494"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLNEMNR"	"[K].lVLNEMNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.34644"	"1217.68559"	"1217.68736"	"-1.45"	"-0.00088"	"7/64"	"7"	"64"	"2304116.6348877"	"HCD"	"MS2"	"19.14503"	"69.8"	"100.000"	"68.0115"	"22630"	"22630"	"22612"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.6"	""	"69.7"	""	"73.1"	""	"105.9"	""	"164.7"	"165.4"	""	"911"	"4"	"36.000"	"29.000"	"16.3865822163441"	"13"	"0.007412"	"0.09458"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNIMTAGPR"	"[K].lNImTAGPR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"609.34857"	"1217.68987"	"1217.68736"	"2.06"	"0.00125"	"7/78"	"7"	"78"	"1657190.00054932"	"HCD"	"MS2"	"7.94556"	"83.0"	"100.000"	"49.6394"	"15207"	"15207"	"15189"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.1"	""	"96.3"	""	"117.0"	""	"164.8"	""	"145.3"	"158.9"	""	"931"	"25"	"36.000"	"29.000"	"0.164785762274339"	"20"	"0.002373"	"0.02248"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"609.35028"	"1217.69328"	"1217.69388"	"-0.49"	"-0.00030"	"6/66"	"6"	"66"	"1865454.69262695"	"HCD"	"MS2"	"13.30825"	"84.9"	"100.000"	"72.7591"	"24556"	"24556"	"24538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.2"	""	"108.5"	""	"120.0"	""	"125.8"	""	"171.7"	"161.0"	""	"867"	"29"	"36.000"	"29.000"	"0.0509318090066286"	""	"0.0001991"	"0.003312"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"609.35052"	"1217.69377"	"1217.69388"	"-0.09"	"-0.00006"	"6/66"	"6"	"66"	"1395505.62481689"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"72.4382"	"24426"	"24426"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.4"	""	"81.5"	""	"99.5"	""	"123.9"	""	"124.0"	"124.3"	""	"867"	"40"	"36.000"	"29.000"	"0.00399014889355"	""	"0.0001686"	"0.001197"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"609.35052"	"1217.69377"	"1217.69388"	"-0.09"	"-0.00006"	"6/66"	"6"	"66"	"1905592.74499512"	"HCD"	"MS2"	"9.096944"	"87.6"	"100.000"	"72.8388"	"24618"	"24618"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.2"	""	"123.5"	""	"116.2"	""	"147.1"	""	"168.8"	"155.5"	""	"867"	"29"	"36.000"	"29.000"	"0.0505811968995927"	""	"0.0001991"	"0.004452"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILEESLR"	"[R].eILEESLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"609.35065"	"1217.69402"	"1217.69388"	"0.11"	"0.00007"	"6/66"	"6"	"66"	"1397985.67388916"	"HCD"	"MS2"	"10.97071"	"68.7"	"100.000"	"72.5161"	"24487"	"24487"	"24462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.5"	""	"88.5"	""	"97.5"	""	"123.7"	""	"125.6"	"120.7"	""	"865"	"45"	"36.000"	"29.000"	"0.00151351284739765"	""	"0.0001686"	"0.001405"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAINEVVTR"	"[R].sAINEVVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"609.35504"	"1217.70281"	"1217.70512"	"-1.90"	"-0.00116"	"7/88"	"7"	"88"	"8314737.2487793"	"HCD"	"MS2"	"13.22554"	"372.2"	"100.000"	"43.9245"	"12854"	"12854"	"12835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"499.9"	""	"486.4"	""	"549.1"	""	"660.6"	"11.7"	"721.4"	"596.8"	""	"841"	"49"	"36.000"	"29.000"	"0.000518520582372756"	"28"	"0"	"0.0001367"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTTLDNGLR"	"[K].vTTLDNGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20069"	"Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Pmpca PE=1 SV=1"	"P20069"	"Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Pmpca PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"609.35529"	"1217.70329"	"1217.70512"	"-1.50"	"-0.00091"	"7/76"	"7"	"76"	"1146906.07989502"	"HCD"	"MS2"	"17.93538"	"74.5"	"100.000"	"54.7047"	"17267"	"17267"	"17244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.6"	""	"93.3"	""	"96.3"	""	"128.3"	""	"141.0"	"143.5"	""	"854"	"50"	"36.000"	"29.000"	"0.000397583062824764"	""	"0"	"9.317E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAINEVVTR"	"[R].sAINEVVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"P62902"	"60S ribosomal protein L31 OS=Rattus norvegicus OX=10116 GN=Rpl31 PE=2 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"609.35541"	"1217.70354"	"1217.70512"	"-1.30"	"-0.00079"	"7/88"	"7"	"88"	"9776087.58435059"	"HCD"	"MS2"	"3.458074"	"429.3"	"100.000"	"43.7756"	"12829"	"12829"	"12810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"605.2"	""	"609.1"	""	"636.0"	""	"761.0"	"15.2"	"764.5"	"671.7"	""	"856"	"49"	"36.000"	"29.000"	"0.000528985501514251"	"28"	"9.9E-05"	"0.0004764"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTTLDNGLR"	"[K].vTTLDNGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20069"	"Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Pmpca PE=1 SV=1"	"P20069"	"Mitochondrial-processing peptidase subunit alpha OS=Rattus norvegicus OX=10116 GN=Pmpca PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"609.35559"	"1217.70391"	"1217.70512"	"-1.00"	"-0.00061"	"5/76"	"5"	"76"	"1259667.41845703"	"HCD"	"MS2"	"12.13733"	"80.9"	"100.000"	"55.1392"	"17410"	"17410"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.6"	""	"103.6"	""	"117.5"	""	"129.3"	""	"140.2"	"158.3"	""	"856"	"35"	"36.000"	"29.000"	"0.0150467868546112"	""	"9.9E-05"	"0.0004179"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISLAEAGATR"	"[R].iSLAEAGATR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5S6T3"	"D-ribitol-5-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Ispd PE=2 SV=1"	"Q5S6T3"	"D-ribitol-5-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Ispd PE=2 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"609.35571"	"1217.70415"	"1217.70512"	"-0.79"	"-0.00048"	"8/86"	"8"	"86"	"1200585.65362549"	"HCD"	"MS2"	"33.65321"	"103.8"	"100.000"	"55.0333"	"17401"	"17401"	"17378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.7"	""	"123.0"	""	"107.1"	""	"200.2"	""	"218.8"	"214.1"	""	"856"	"39"	"36.000"	"29.000"	"0.0058944565268661"	"25"	"0"	"0.0001248"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVGLSQER"	"[R].sLVGLSQER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"609.35614"	"1217.70500"	"1217.70512"	"-0.09"	"-0.00006"	"7/82"	"7"	"82"	"1799044.8916626"	"HCD"	"MS2"	"6.848469"	"101.2"	"100.000"	"51.8025"	"16083"	"16083"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.9"	""	"129.5"	""	"134.3"	""	"166.8"	"3.8"	"190.9"	"192.8"	""	"787"	"44"	"35.000"	"28.000"	"0.00156655171612801"	"27"	"0"	"0.0002639"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLVGLSQER"	"[R].sLVGLSQER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"609.35657"	"1217.70586"	"1217.70512"	"0.61"	"0.00037"	"7/82"	"7"	"82"	"1936759.44921875"	"HCD"	"MS2"	"10.29216"	"111.5"	"100.000"	"52.0996"	"16170"	"16170"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.1"	""	"139.5"	""	"146.6"	""	"176.5"	"2.5"	"201.3"	"225.2"	""	"785"	"44"	"35.000"	"28.000"	"0.00154468404616393"	"25"	"0"	"9.76E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVEAEPK"	"[K].sVEAEPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.36053"	"1217.71379"	"1217.71417"	"-0.31"	"-0.00019"	"5/56"	"5"	"56"	"1144088.94781494"	"HCD"	"MS2"	"44.41451"	"81.7"	"100.000"	"32.7110"	"8345"	"8345"	"8315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.9"	""	"100.7"	""	"110.3"	""	"135.3"	"2.6"	"155.1"	"162.3"	""	"817"	"20"	"36.000"	"29.000"	"0.428738082104474"	"24"	"0.004819"	"0.0577"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVEAEPK"	"[K].sVEAEPk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"609.36053"	"1217.71379"	"1217.71417"	"-0.31"	"-0.00019"	"6/56"	"6"	"56"	"1912714.61090088"	"HCD"	"MS2"	"65.57539"	"131.6"	"100.000"	"32.7132"	"8308"	"8308"	"8282"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.3"	""	"152.9"	""	"188.2"	""	"219.3"	"2.8"	"250.1"	"264.5"	""	"817"	"27"	"36.000"	"29.000"	"0.085544493821509"	"23"	"0.002525"	"0.02396"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVNDIK"	"[K].nGVNDIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.2258"	"0.0000"	"1"	"1"	"1"	"609.36542"	"1217.72356"	"1217.72541"	"-1.52"	"-0.00092"	"6/60"	"6"	"60"	"2252832.06921387"	"HCD"	"MS2"	"0"	"185.7"	"100.000"	"38.4982"	"10654"	"10654"	"10626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.4"	""	"243.3"	""	"245.6"	""	"319.7"	"3.9"	"315.1"	"334.5"	""	"773"	"31"	"35.000"	"28.000"	"0.032370506754204"	""	"0.002035"	"0.01823"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVNDIK"	"[K].nGVNDIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"609.36621"	"1217.72515"	"1217.72541"	"-0.22"	"-0.00013"	"6/60"	"6"	"60"	"2300289.74359131"	"HCD"	"MS2"	"0"	"184.4"	"100.000"	"38.4016"	"10650"	"10650"	"10628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.7"	""	"254.7"	""	"224.3"	""	"323.6"	"1.6"	"327.3"	"322.0"	""	"779"	"31"	"35.000"	"28.000"	"0.0325467375601071"	""	"0.002035"	"0.01792"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSTPVK"	"[K].iDSTPVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"406.58801"	"1217.74948"	"1217.75056"	"-0.88"	"-0.00036"	"7/52"	"7"	"52"	"2079206.88018799"	"HCD"	"MS2"	"31.85122"	"110.7"	"100.000"	"47.4780"	"14331"	"14331"	"14303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.9"	""	"147.6"	""	"147.9"	""	"169.4"	""	"208.8"	"229.7"	""	"596"	"20"	"34.000"	"27.000"	"0.269287543169246"	""	"0.00452"	"0.05286"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSTPVK"	"[K].iDSTPVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"609.37842"	"1217.74956"	"1217.75056"	"-0.82"	"-0.00050"	"6/52"	"6"	"52"	"6259515.11413574"	"HCD"	"MS2"	"24.37827"	"409.2"	"100.000"	"47.4506"	"14320"	"14320"	"14303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"550.3"	""	"525.0"	""	"534.0"	""	"754.4"	""	"769.5"	"747.2"	""	"586"	"25"	"34.000"	"27.000"	"0.0850878637758084"	"22"	"0.00329"	"0.03563"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDGLEK"	"[K].vVDGLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"2"	"2"	"0.0811"	"0.0000"	"1"	"1"	"1"	"609.37860"	"1217.74993"	"1217.75056"	"-0.52"	"-0.00032"	"6/54"	"6"	"54"	"2941329.2399292"	"HCD"	"MS2"	"28.89691"	"202.5"	"100.000"	"62.4289"	"20366"	"20366"	"20349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"308.6"	""	"257.0"	""	"265.4"	""	"341.2"	""	"373.9"	"377.6"	""	"569"	"37"	"34.000"	"27.000"	"0.00588955213731051"	""	"0.001348"	"0.01054"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSTPVK"	"[K].iDSTPVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.2609"	"0.0000"	"1"	"1"	"1"	"406.58820"	"1217.75003"	"1217.75056"	"-0.43"	"-0.00018"	"7/52"	"7"	"52"	"2056102.60314941"	"HCD"	"MS2"	"66.32655"	"114.0"	"100.000"	"47.7864"	"14419"	"14419"	"14390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.5"	""	"157.9"	""	"149.7"	""	"196.5"	""	"196.7"	"232.4"	""	"569"	"23"	"34.000"	"27.000"	"0.150689249787177"	""	"0.002628"	"0.02748"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSTPVK"	"[K].iDSTPVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"609.37872"	"1217.75017"	"1217.75056"	"-0.32"	"-0.00019"	"4/52"	"4"	"52"	"6425705.41082764"	"HCD"	"MS2"	"26.64886"	"411.6"	"100.000"	"47.7633"	"14409"	"14409"	"14390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"586.8"	""	"529.8"	""	"516.7"	""	"767.4"	""	"782.2"	"724.3"	""	"569"	"23"	"34.000"	"27.000"	"0.135544615746141"	"23"	"0.003401"	"0.03827"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIVDIK"	"[K].gDIVDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"609.37909"	"1217.75090"	"1217.75056"	"0.28"	"0.00017"	"6/54"	"6"	"54"	"2513670.7598877"	"HCD"	"MS2"	"18.33113"	"170.9"	"100.000"	"73.4521"	"24868"	"24868"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.9"	""	"202.2"	""	"235.0"	""	"293.6"	""	"351.4"	"313.3"	""	"569"	"38"	"34.000"	"27.000"	"0.00495544055479914"	""	"0.001348"	"0.01111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIVDIK"	"[K].gDIVDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"609.37909"	"1217.75090"	"1217.75056"	"0.28"	"0.00017"	"6/54"	"6"	"54"	"2556243.45465088"	"HCD"	"MS2"	"18.10196"	"168.0"	"100.000"	"73.3914"	"24814"	"24814"	"24794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.1"	""	"190.0"	""	"235.3"	""	"281.6"	""	"332.7"	"313.1"	""	"569"	"38"	"34.000"	"27.000"	"0.00495544055479914"	""	"0.001488"	"0.01228"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIVDIK"	"[K].gDIVDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.0741"	"0.0000"	"1"	"1"	"1"	"609.37915"	"1217.75102"	"1217.75056"	"0.38"	"0.00023"	"10/54"	"10"	"54"	"582717.545349121"	"HCD"	"MS2"	"6.429427"	"43.8"	"100.000"	"73.7747"	"25000"	"25000"	"24976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"46.8"	""	"58.7"	""	"71.2"	""	"92.0"	"95.2"	""	"569"	"27"	"34.000"	"27.000"	"0.0557291309612455"	""	"0.001261"	"0.00973"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIVDIK"	"[K].gDIVDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"609.37952"	"1217.75176"	"1217.75056"	"0.98"	"0.00060"	"5/54"	"5"	"54"	"507730.096740723"	"HCD"	"MS2"	"11.19118"	"40.3"	"100.000"	"73.6930"	"24937"	"24937"	"24918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.9"	""	"41.4"	""	"53.9"	""	"67.9"	""	"86.5"	"81.4"	""	"569"	"22"	"34.000"	"27.000"	"0.187967285958161"	""	"0.001951"	"0.01629"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIVDIK"	"[K].gDIVDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"609.38031"	"1217.75334"	"1217.75056"	"2.29"	"0.00139"	"5/54"	"5"	"54"	"1503708.89483643"	"HCD"	"MS2"	"52.11752"	"97.4"	"100.000"	"73.0891"	"24691"	"24691"	"24666"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.8"	""	"124.4"	""	"140.8"	""	"165.8"	"1.0"	"185.4"	"158.3"	""	"552"	"23"	"34.000"	"27.000"	"0.135490573818118"	""	"0.008327"	"0.1066"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GDIVDIK"	"[K].gDIVDIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"P20280"	"60S ribosomal protein L21 OS=Rattus norvegicus OX=10116 GN=Rpl21 PE=1 SV=3"	"0"	"2"	"2"	"0.0400"	"0.0000"	"1"	"1"	"1"	"609.38068"	"1217.75408"	"1217.75056"	"2.89"	"0.00176"	"6/54"	"6"	"54"	"1328449.6229248"	"HCD"	"MS2"	"60.37757"	"84.2"	"100.000"	"73.1595"	"24749"	"24749"	"24728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.5"	""	"113.1"	""	"111.3"	""	"142.0"	""	"163.9"	"144.2"	""	"556"	"25"	"34.000"	"27.000"	"0.0887247523718011"	""	"0.006997"	"0.08832"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSADQWR"	"[R].nLSADQWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"609.82355"	"1218.63982"	"1218.64285"	"-2.49"	"-0.00152"	"5/74"	"5"	"74"	"2161585.49273682"	"HCD"	"MS2"	"36.01197"	"137.7"	"100.000"	"51.7142"	"16014"	"16014"	"15994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.2"	""	"148.6"	""	"173.8"	""	"235.6"	""	"271.4"	"309.4"	""	"708"	"33"	"35.000"	"28.000"	"0.0182390940181942"	"26"	"0.0001991"	"0.003324"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSADQWR"	"[R].nLSADQWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.82379"	"1218.64031"	"1218.64285"	"-2.09"	"-0.00127"	"6/74"	"6"	"74"	"1753381.23370361"	"HCD"	"MS2"	"60.42352"	"114.0"	"100.000"	"51.3595"	"15904"	"15904"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.2"	""	"130.5"	""	"141.2"	""	"195.9"	""	"212.4"	"263.7"	""	"708"	"20"	"35.000"	"28.000"	"0.356453810773539"	"24"	"0.0001991"	"0.00557"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSADQWR"	"[R].nLSADQWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"609.82440"	"1218.64153"	"1218.64285"	"-1.09"	"-0.00066"	"6/74"	"6"	"74"	"2451982.99755859"	"HCD"	"MS2"	"27.89532"	"151.8"	"100.000"	"51.6882"	"16037"	"16037"	"16015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.1"	""	"184.7"	""	"180.5"	""	"288.6"	""	"304.0"	"291.8"	""	"689"	"30"	"35.000"	"28.000"	"0.0364912908323576"	"23"	"0.0001991"	"0.003957"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIFTPTNQIR"	"[M].sIFTPTNQIR.[L]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"609.82697"	"1218.64665"	"1218.64771"	"-0.87"	"-0.00053"	"6/88"	"6"	"88"	"528394.787658691"	"HCD"	"MS2"	"36.10611"	"18.0"	"100.000"	"96.8374"	"34315"	"34315"	"34295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"19.4"	""	"22.3"	""	"28.6"	""	"37.1"	"43.9"	"NoQuanLabels"	"702"	"23"	"35.000"	"28.000"	"0.157147369765903"	"19"	"0.00192"	"0.01604"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPVTSPFR"	"[K].eGPVTSPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"609.83630"	"1218.66533"	"1218.66800"	"-2.19"	"-0.00134"	"6/74"	"6"	"74"	"965576.879089355"	"HCD"	"MS2"	"32.05643"	"65.0"	"100.000"	"53.0024"	"16573"	"16573"	"16546"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.9"	""	"72.4"	""	"81.1"	""	"132.3"	"1.3"	"131.8"	"119.2"	""	"893"	"24"	"36.000"	"29.000"	"0.193562607200031"	"25"	"0.0003938"	"0.006242"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWISDIR"	"[R].eAWISDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"609.83710"	"1218.66692"	"1218.66800"	"-0.89"	"-0.00054"	"7/66"	"7"	"66"	"491316.462280273"	"HCD"	"MS2"	"54.33147"	"24.8"	"100.000"	"85.2527"	"29617"	"29617"	"29591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.7"	""	"38.8"	""	"38.6"	""	"40.6"	""	"37.4"	"43.5"	""	"848"	"28"	"36.000"	"29.000"	"0.0600296562701803"	""	"0.0001991"	"0.003886"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPVTSPFR"	"[K].eGPVTSPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"Q9JIH7"	"Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus OX=10116 GN=Wnk1 PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"609.83728"	"1218.66728"	"1218.66800"	"-0.59"	"-0.00036"	"7/74"	"7"	"74"	"1070795.50280762"	"HCD"	"MS2"	"21.38415"	"63.4"	"100.000"	"53.4097"	"16705"	"16705"	"16682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"73.0"	""	"75.5"	""	"130.2"	"0.8"	"127.9"	"124.7"	""	"842"	"21"	"36.000"	"29.000"	"0.342990503572773"	"25"	"0.001348"	"0.01077"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWISDIR"	"[R].eAWISDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"609.83759"	"1218.66789"	"1218.66800"	"-0.09"	"-0.00005"	"5/66"	"5"	"66"	"674855.20098877"	"HCD"	"MS2"	"47.4375"	"30.4"	"100.000"	"85.3236"	"29675"	"29675"	"29653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.9"	""	"37.0"	""	"43.4"	""	"55.2"	""	"51.6"	"49.0"	""	"843"	"36"	"36.000"	"29.000"	"0.011035641379643"	"29"	"0.0001991"	"0.002092"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWISDIR"	"[R].eAWISDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"609.83771"	"1218.66814"	"1218.66800"	"0.11"	"0.00007"	"6/66"	"6"	"66"	"915894.81829834"	"HCD"	"MS2"	"21.29181"	"42.0"	"100.000"	"85.5476"	"29736"	"29736"	"29719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.7"	""	"61.5"	""	"54.2"	""	"70.3"	""	"68.8"	"69.5"	""	"829"	"33"	"36.000"	"29.000"	"0.022259967959547"	""	"0.0001991"	"0.005482"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWISDIR"	"[R].eAWISDIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.2973"	"0.0000"	"1"	"1"	"1"	"609.83789"	"1218.66850"	"1218.66800"	"0.41"	"0.00025"	"5/66"	"5"	"66"	"792438.272094727"	"HCD"	"MS2"	"30.88699"	"35.7"	"100.000"	"85.5955"	"29784"	"29784"	"29772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"42.1"	""	"44.9"	""	"53.1"	"0.8"	"57.5"	"62.4"	""	"829"	"37"	"36.000"	"29.000"	"0.00819453915826366"	""	"0.0001991"	"0.002846"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"609.85724"	"1218.70720"	"1218.70942"	"-1.82"	"-0.00111"	"6/66"	"6"	"66"	"3715931.59918213"	"HCD"	"MS2"	"0"	"262.0"	"100.000"	"31.8962"	"8017"	"8017"	"8006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"426.7"	""	"361.2"	""	"363.0"	""	"361.1"	""	"437.6"	"532.9"	""	"775"	"35"	"35.000"	"28.000"	"0.0112530877860498"	""	"0.0001991"	"0.004466"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4324"	"0.0000"	"1"	"1"	"1"	"609.85724"	"1218.70720"	"1218.70942"	"-1.82"	"-0.00111"	"6/66"	"6"	"66"	"7536680.28283691"	"HCD"	"MS2"	"0"	"493.1"	"100.000"	"31.9125"	"7987"	"7987"	"7969"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"829.9"	""	"634.2"	""	"695.9"	""	"705.7"	""	"801.0"	"1008.6"	""	"775"	"37"	"35.000"	"28.000"	"0.0069226393525517"	""	"0.0001991"	"0.005899"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"406.90747"	"1218.70786"	"1218.70942"	"-1.28"	"-0.00052"	"9/66"	"9"	"66"	"6020857.05535889"	"HCD"	"MS2"	"17.70999"	"399.3"	"100.000"	"31.4255"	"7827"	"7827"	"7808"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"654.8"	""	"558.0"	""	"566.4"	""	"591.6"	""	"644.7"	"766.8"	""	"791"	"29"	"35.000"	"28.000"	"0.0494477446451108"	"22"	"0.002189"	"0.02064"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"406.90753"	"1218.70804"	"1218.70942"	"-1.13"	"-0.00046"	"8/66"	"8"	"66"	"5891066.10388184"	"HCD"	"MS2"	"36.60796"	"378.9"	"100.000"	"31.5511"	"7840"	"7840"	"7818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"651.1"	""	"520.8"	""	"524.8"	""	"580.5"	""	"603.1"	"704.7"	""	"791"	"31"	"35.000"	"28.000"	"0.0338178884945892"	"23"	"0.0009352"	"0.008351"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.85773"	"1218.70818"	"1218.70942"	"-1.02"	"-0.00062"	"6/66"	"6"	"66"	"2531030.19781494"	"HCD"	"MS2"	"0"	"185.7"	"100.000"	"32.1968"	"8100"	"8100"	"8082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.6"	""	"253.8"	""	"246.4"	""	"271.1"	""	"319.7"	"373.3"	""	"791"	"32"	"35.000"	"28.000"	"0.0223947638814629"	""	"0.0001991"	"0.004184"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"609.85803"	"1218.70879"	"1218.70942"	"-0.52"	"-0.00032"	"6/66"	"6"	"66"	"16594032.446106"	"HCD"	"MS2"	"1.422123"	"1124.7"	"100.000"	"31.3123"	"7781"	"7781"	"7760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2017.9"	""	"1548.3"	""	"1556.2"	""	"1668.0"	""	"1732.9"	"2117.9"	""	"785"	"38"	"35.000"	"28.000"	"0.00685235195021299"	""	"0.0003938"	"0.006294"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"609.85809"	"1218.70891"	"1218.70942"	"-0.42"	"-0.00026"	"9/66"	"9"	"66"	"1650205.12988281"	"HCD"	"MS2"	"37.94433"	"116.4"	"100.000"	"31.2966"	"7737"	"7737"	"7706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.7"	""	"151.7"	""	"151.6"	""	"173.0"	""	"187.1"	"243.6"	""	"785"	"28"	"35.000"	"28.000"	"0.0669637337683727"	""	"0.002799"	"0.02966"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NGVNDIK"	"[K].nGVNDIk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"P27791"	"cAMP-dependent protein kinase catalytic subunit alpha OS=Rattus norvegicus OX=10116 GN=Prkaca PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"609.85809"	"1218.70891"	"1218.70942"	"-0.42"	"-0.00026"	"5/60"	"5"	"60"	"2245365.75982666"	"HCD"	"MS2"	"43.65256"	"184.5"	"100.000"	"44.9488"	"13305"	"13305"	"13283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"275.4"	""	"203.8"	""	"216.5"	""	"324.9"	""	"357.1"	"373.5"	""	"785"	"22"	"35.000"	"28.000"	"0.25109592292694"	""	"0.002559"	"0.0256"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"609.85815"	"1218.70903"	"1218.70942"	"-0.32"	"-0.00020"	"6/66"	"6"	"66"	"68412747.4482422"	"HCD"	"MS2"	"0.05822548"	"477.3"	"11.198"	"31.6178"	"7905"	"7905"	"7888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"769.8"	""	"623.0"	""	"668.8"	""	"670.8"	""	"789.6"	"1006.0"	""	"785"	"38"	"35.000"	"28.000"	"0.00668097214545019"	""	"0.001615"	"0.01439"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVDGPSGK"	"[K].tVDGPSGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.85876"	"1218.71025"	"1218.70942"	"0.68"	"0.00041"	"6/66"	"6"	"66"	"145911628.259277"	"HCD"	"MS2"	"0"	"479.5"	"9.738"	"31.5954"	"7858"	"7858"	"7848"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"836.0"	""	"642.0"	""	"649.1"	""	"704.1"	""	"774.8"	"935.8"	""	"788"	"38"	"35.000"	"28.000"	"0.00606032928279396"	""	"0.001453"	"0.01165"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAQSQK"	"[K].aQAQSQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"609.86334"	"1218.71941"	"1218.72066"	"-1.02"	"-0.00062"	"6/58"	"6"	"58"	"1823362.47296143"	"HCD"	"MS2"	"100"	"159.2"	"100.000"	"20.6184"	"3521"	"3521"	"3493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"248.9"	""	"181.3"	""	"205.7"	""	"268.9"	""	"317.3"	"297.9"	""	"633"	"14"	"35.000"	"28.000"	"1.25421997841847"	"23"	"0.002508"	"0.02346"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAQSQK"	"[K].aQAQSQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"609.86346"	"1218.71965"	"1218.72066"	"-0.82"	"-0.00050"	"6/58"	"6"	"58"	"2234562.95996094"	"HCD"	"MS2"	"0"	"179.8"	"100.000"	"20.6175"	"3558"	"3558"	"3534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.9"	""	"189.8"	""	"227.0"	""	"303.6"	""	"352.7"	"342.5"	""	"632"	"28"	"34.000"	"28.000"	"0.0469555662962694"	"28"	"0.00307"	"0.03417"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILNNGK"	"[K].tILNnGk.[T]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"609.87512"	"1218.74297"	"1218.74581"	"-2.33"	"-0.00142"	"6/54"	"6"	"54"	"2173487.51031494"	"HCD"	"MS2"	"38.2986"	"164.7"	"100.000"	"51.4097"	"15891"	"15891"	"15869"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"275.1"	"2.0"	"133.5"	""	"142.6"	""	"217.7"	"3.4"	"229.1"	"561.4"	""	"601"	"33"	"34.000"	"27.000"	"0.014956999403617"	"26"	"0.001453"	"0.01183"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGVEAVK"	"[K].tGGVEAVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.1923"	"0.0000"	"1"	"1"	"1"	"609.87561"	"1218.74394"	"1218.74581"	"-1.53"	"-0.00093"	"7/64"	"7"	"64"	"1766674.32958984"	"HCD"	"MS2"	"0"	"149.3"	"100.000"	"39.1410"	"10917"	"10917"	"10889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.6"	""	"178.6"	""	"201.9"	""	"277.6"	""	"269.9"	"290.7"	""	"580"	"26"	"34.000"	"27.000"	"0.08005675783039"	""	"0.0001991"	"0.005358"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILNNGK"	"[K].tILNnGk.[T]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"609.87579"	"1218.74431"	"1218.74581"	"-1.23"	"-0.00075"	"5/54"	"5"	"54"	"1280987.81060791"	"HCD"	"MS2"	"13.21225"	"107.8"	"100.000"	"50.2173"	"15443"	"15443"	"15419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.8"	""	"88.9"	""	"87.7"	""	"124.6"	""	"154.0"	"388.9"	""	"578"	"18"	"34.000"	"27.000"	"0.438427556195748"	"23"	"0.00296"	"0.03156"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TILNNGK"	"[K].tILnNGk.[T]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"2"	"2"	"609.87579"	"1218.74431"	"1218.74581"	"-1.23"	"-0.00075"	"5/54"	"5"	"54"	"1280987.81060791"	"HCD"	"MS2"	"13.21225"	"107.8"	"100.000"	"50.2173"	"15443"	"15443"	"15419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.8"	""	"88.9"	""	"87.7"	""	"124.6"	""	"154.0"	"388.9"	""	"578"	"18"	"34.000"	"27.000"	"0.438427556195748"	"23"	"0.009239"	"0.1182"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAQAIK"	"[R].eTAQAIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"609.87592"	"1218.74455"	"1218.74581"	"-1.03"	"-0.00063"	"12/56"	"12"	"56"	"2706816.4510498"	"HCD"	"MS2"	"49.50555"	"208.9"	"100.000"	"35.4288"	"9446"	"9446"	"9421"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"325.6"	""	"293.8"	""	"275.4"	""	"376.4"	""	"395.1"	"314.9"	""	"578"	"42"	"34.000"	"27.000"	"0.00190063114995716"	""	"0.0008247"	"0.007559"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"609.87592"	"1218.74455"	"1218.74581"	"-1.03"	"-0.00063"	"12/62"	"12"	"62"	"26719960.7784424"	"HCD"	"MS2"	"0.2443486"	"615.4"	"32.941"	"37.3567"	"10189"	"10189"	"10172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"804.4"	""	"787.4"	""	"813.7"	""	"1040.3"	""	"1159.8"	"1236.3"	""	"578"	"38"	"34.000"	"27.000"	"0.00436413164553438"	""	"0.003786"	"0.04045"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"609.87604"	"1218.74480"	"1218.74581"	"-0.83"	"-0.00050"	"12/62"	"12"	"62"	"11527108.826416"	"HCD"	"MS2"	"14.27806"	"802.8"	"100.000"	"36.9924"	"10078"	"10078"	"10058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1198.1"	""	"1061.6"	""	"1038.7"	""	"1390.5"	""	"1434.5"	"1489.8"	""	"575"	"38"	"34.000"	"27.000"	"0.0043016775112715"	""	"0.002373"	"0.02237"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQSLDK"	"[K].aVQSLDk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"609.87604"	"1218.74480"	"1218.74581"	"-0.83"	"-0.00050"	"10/60"	"10"	"60"	"14112990.4467773"	"HCD"	"MS2"	"36.03984"	"539.4"	"55.567"	"43.9255"	"12891"	"12891"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"789.5"	""	"677.1"	""	"706.2"	""	"911.6"	""	"1030.5"	"1000.2"	""	"575"	"29"	"34.000"	"27.000"	"0.037987249482864"	""	"0.003529"	"0.03919"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAETAK"	"[R].vAAAETAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"609.87610"	"1218.74492"	"1218.74581"	"-0.73"	"-0.00044"	"7/58"	"7"	"58"	"6115011.08044434"	"HCD"	"MS2"	"0"	"415.5"	"100.000"	"35.8418"	"9576"	"9576"	"9559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"539.1"	""	"559.6"	""	"544.1"	""	"684.6"	""	"803.1"	"815.4"	""	"567"	"40"	"34.000"	"27.000"	"0.00255007564363765"	""	"0.0001686"	"0.001321"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAQAIK"	"[R].eTAQAIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.2564"	"0.0000"	"1"	"1"	"1"	"609.87616"	"1218.74504"	"1218.74581"	"-0.63"	"-0.00038"	"12/56"	"12"	"56"	"2636638.8939209"	"HCD"	"MS2"	"38.28373"	"212.7"	"100.000"	"35.5460"	"9456"	"9456"	"9434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"343.8"	""	"287.0"	""	"282.3"	""	"378.7"	""	"384.8"	"339.1"	""	"540"	"39"	"34.000"	"27.000"	"0.00312869886161884"	""	"0.001103"	"0.009059"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQSLDK"	"[K].aVQSLDk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"609.87616"	"1218.74504"	"1218.74581"	"-0.63"	"-0.00038"	"12/60"	"12"	"60"	"13875776.5500488"	"HCD"	"MS2"	"24.02867"	"474.7"	"47.651"	"44.1545"	"12948"	"12948"	"12929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"664.5"	""	"588.0"	""	"607.8"	""	"811.2"	""	"928.3"	"904.4"	""	"540"	"40"	"34.000"	"27.000"	"0.0029878842167397"	""	"0.001488"	"0.0121"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"609.87622"	"1218.74516"	"1218.74581"	"-0.53"	"-0.00032"	"6/62"	"6"	"62"	"1647701.4083252"	"HCD"	"MS2"	"30.01878"	"145.8"	"100.000"	"37.5994"	"10323"	"10323"	"10309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.2"	""	"187.8"	""	"202.9"	""	"245.5"	""	"252.7"	"283.8"	""	"540"	"37"	"34.000"	"27.000"	"0.00573276004740059"	""	"0.000264"	"0.006114"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGVEAVK"	"[K].tGGVEAVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"O08816"	"Neural Wiskott-Aldrich syndrome protein OS=Rattus norvegicus OX=10116 GN=Wasl PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"609.87622"	"1218.74516"	"1218.74581"	"-0.53"	"-0.00032"	"10/64"	"10"	"64"	"1900132.63195801"	"HCD"	"MS2"	"0"	"154.2"	"100.000"	"39.0423"	"10912"	"10912"	"10890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"226.7"	""	"189.5"	""	"213.7"	""	"283.0"	"1.1"	"282.4"	"263.5"	""	"540"	"27"	"34.000"	"27.000"	"0.0568020178736948"	""	"0.0001686"	"0.001752"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.4250"	"0.0000"	"1"	"1"	"1"	"609.87628"	"1218.74529"	"1218.74581"	"-0.43"	"-0.00026"	"12/62"	"12"	"62"	"8906321.65344238"	"HCD"	"MS2"	"16.38765"	"635.8"	"100.000"	"37.0700"	"10072"	"10072"	"10052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"943.6"	""	"826.5"	""	"790.7"	""	"1128.5"	""	"1160.6"	"1177.7"	""	"540"	"40"	"34.000"	"27.000"	"0.00269379017232089"	""	"0.001951"	"0.01696"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"609.87634"	"1218.74541"	"1218.74581"	"-0.33"	"-0.00020"	"12/62"	"12"	"62"	"19651963.8106689"	"HCD"	"MS2"	"0"	"638.2"	"46.934"	"37.2929"	"10201"	"10201"	"10185"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"831.0"	""	"770.8"	""	"837.6"	""	"1098.1"	""	"1222.6"	"1303.0"	""	"540"	"42"	"34.000"	"27.000"	"0.00163442036183557"	""	"0.002525"	"0.02489"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AAVDGLSK"	"[K].aAVDGLSk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32PX2"	"Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Rattus norvegicus OX=10116 GN=Aimp2 PE=2 SV=1"	"Q32PX2"	"Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 OS=Rattus norvegicus OX=10116 GN=Aimp2 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"609.87640"	"1218.74553"	"1218.74581"	"-0.23"	"-0.00014"	"6/62"	"6"	"62"	"1380993.84210205"	"HCD"	"MS2"	"22.20448"	"112.8"	"100.000"	"50.5772"	"15555"	"15555"	"15526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.6"	""	"101.2"	""	"94.1"	""	"149.1"	""	"156.2"	"402.3"	""	"540"	"12"	"34.000"	"27.000"	"1.78387230962051"	"22"	"0.001951"	"0.01727"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLESAVK"	"[K].nLESAVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"609.87640"	"1218.74553"	"1218.74581"	"-0.23"	"-0.00014"	"6/62"	"6"	"62"	"3113721.77429199"	"HCD"	"MS2"	"27.35272"	"252.7"	"100.000"	"48.2195"	"14595"	"14595"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.4"	""	"335.2"	""	"348.8"	""	"383.6"	""	"480.8"	"535.4"	""	"540"	"39"	"34.000"	"27.000"	"0.00346229257317126"	"27"	"0.001261"	"0.009988"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLESAVK"	"[K].nLESAVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"609.87653"	"1218.74578"	"1218.74581"	"-0.03"	"-0.00002"	"12/62"	"12"	"62"	"4117522.89294434"	"HCD"	"MS2"	"15.7439"	"323.1"	"100.000"	"47.8348"	"14476"	"14476"	"14458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"403.0"	""	"422.1"	""	"442.2"	""	"521.6"	""	"609.9"	"665.7"	""	"539"	"41"	"34.000"	"27.000"	"0.00213579108564487"	""	"0.001718"	"0.01502"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAETAK"	"[R].vAAAETAk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"609.87653"	"1218.74578"	"1218.74581"	"-0.03"	"-0.00002"	"7/58"	"7"	"58"	"5858643.28344727"	"HCD"	"MS2"	"2.037387"	"400.7"	"100.000"	"35.7433"	"9573"	"9573"	"9555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"513.4"	""	"546.1"	""	"531.1"	""	"653.5"	""	"766.5"	"794.5"	""	"539"	"47"	"34.000"	"27.000"	"0.000508813668581451"	""	"0.0001686"	"0.001339"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAQAIK"	"[R].eTAQAIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"609.87665"	"1218.74602"	"1218.74581"	"0.17"	"0.00011"	"6/56"	"6"	"56"	"1257318.43725586"	"HCD"	"MS2"	"52.92723"	"108.6"	"100.000"	"38.1948"	"10530"	"10530"	"10502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.1"	""	"133.2"	""	"131.3"	""	"161.4"	""	"214.9"	"233.5"	""	"539"	"23"	"34.000"	"27.000"	"0.139495041210678"	""	"0.001348"	"0.01132"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTIPTK"	"[R].nSTIPTk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"609.87671"	"1218.74614"	"1218.74581"	"0.27"	"0.00017"	"6/68"	"6"	"68"	"4375034.13220215"	"HCD"	"MS2"	"2.59463"	"285.8"	"100.000"	"38.6337"	"10745"	"10745"	"10723"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"403.7"	""	"402.0"	""	"393.2"	""	"435.8"	""	"517.1"	"561.6"	""	"539"	"32"	"34.000"	"27.000"	"0.0160530947681068"	""	"0.001999"	"0.01738"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLAK"	"[K].qAETLAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"609.87732"	"1218.74736"	"1218.74581"	"1.27"	"0.00078"	"6/62"	"6"	"62"	"1277998.10394287"	"HCD"	"MS2"	"36.28799"	"119.2"	"100.000"	"37.7421"	"10345"	"10345"	"10325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.6"	""	"166.5"	""	"150.7"	""	"183.6"	"1.7"	"209.2"	"230.6"	""	"539"	"32"	"34.000"	"27.000"	"0.0172012009528353"	""	"0.0009352"	"0.007895"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTIPTK"	"[R].nSTIPTk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"609.87756"	"1218.74785"	"1218.74581"	"1.68"	"0.00102"	"5/68"	"5"	"68"	"4142425.78955078"	"HCD"	"MS2"	"9.187076"	"274.2"	"100.000"	"38.7120"	"10741"	"10741"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"391.8"	""	"396.4"	""	"384.8"	""	"437.3"	""	"483.4"	"503.8"	""	"539"	"28"	"34.000"	"27.000"	"0.0406030604337327"	""	"0.00212"	"0.01906"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDFVAGGY"	"[R].dFDFVAGGY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.29456"	"1219.58183"	"1219.58327"	"-1.18"	"-0.00072"	"4/70"	"4"	"70"	"337934.852905273"	"HCD"	"MS2"	"45.05024"	"11.9"	"100.000"	"113.3119"	"40860"	"40860"	"40831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.1"	""	"14.8"	""	"29.0"	""	"16.7"	""	"24.3"	"15.8"	""	"296"	"8"	"31.000"	"24.000"	"2.24523454383982"	"13"	"0.009382"	"0.1222"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDFVAGGY"	"[R].dFDFVAGGY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.29492"	"1219.58257"	"1219.58327"	"-0.58"	"-0.00035"	"5/70"	"5"	"70"	"376918.295532227"	"HCD"	"MS2"	"37.77367"	"15.1"	"100.000"	"113.2456"	"40819"	"40819"	"40793"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"18.4"	""	"44.2"	""	"16.6"	""	"27.7"	"22.4"	""	"307"	"5"	"31.000"	"24.000"	"5.15357237862936"	"13"	"0.003001"	"0.03224"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"610.31342"	"1219.61955"	"1219.62687"	"-6.00"	"-0.00366"	"8/70"	"8"	"70"	"845916.490966797"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"46.7527"	"13999"	"13999"	"13981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.5"	""	"57.2"	""	"77.1"	""	"96.8"	"1.0"	"122.0"	"113.4"	""	"576"	"28"	"34.000"	"27.000"	"0.0499335551353192"	"17"	"0.0001991"	"0.002019"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.31421"	"1219.62114"	"1219.62687"	"-4.69"	"-0.00286"	"6/70"	"6"	"70"	"1328568.96148682"	"HCD"	"MS2"	"32.58696"	"89.8"	"100.000"	"46.4099"	"13865"	"13865"	"13852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.3"	""	"111.5"	""	"99.7"	""	"165.1"	"11.6"	"155.3"	"177.4"	""	"574"	"33"	"34.000"	"27.000"	"0.0133623208841089"	"15"	"0"	"0.0001031"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAWEVDSGR"	"[R].aAWEVDSGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"610.31476"	"1219.62224"	"1219.62687"	"-3.79"	"-0.00231"	"8/70"	"8"	"70"	"1251143.73138428"	"HCD"	"MS2"	"100"	"95.2"	"100.000"	"46.2082"	"13818"	"13818"	"13801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.4"	""	"104.8"	""	"124.9"	""	"147.3"	"0.9"	"197.8"	"194.2"	""	"591"	"31"	"34.000"	"27.000"	"0.0250932830373231"	"21"	"0"	"9.911E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSSYYR"	"[R].tITSSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"610.32922"	"1219.65117"	"1219.65202"	"-0.70"	"-0.00042"	"6/64"	"6"	"64"	"12433115.7133179"	"HCD"	"MS2"	"9.436968"	"628.7"	"100.000"	"43.3206"	"12609"	"12609"	"12594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"854.2"	""	"804.8"	""	"890.7"	""	"1059.1"	"15.0"	"1122.1"	"1211.3"	""	"836"	"35"	"36.000"	"29.000"	"0.0136513713848036"	"18"	"0.001951"	"0.01636"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSSYYR"	"[R].tITSSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"610.32928"	"1219.65129"	"1219.65202"	"-0.60"	"-0.00036"	"6/64"	"6"	"64"	"12447201.8735962"	"HCD"	"MS2"	"16.16508"	"626.4"	"100.000"	"43.1526"	"12574"	"12574"	"12555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"873.0"	""	"867.8"	""	"863.8"	""	"1076.9"	"14.2"	"1065.4"	"1171.0"	""	"828"	"33"	"36.000"	"29.000"	"0.0189670741099817"	"17"	"0.002084"	"0.01884"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSSYYR"	"[R].tITSSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"610.32935"	"1219.65141"	"1219.65202"	"-0.50"	"-0.00030"	"6/64"	"6"	"64"	"12233739.9279175"	"HCD"	"MS2"	"5.466436"	"444.1"	"70.230"	"43.4657"	"12702"	"12702"	"12683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"591.4"	"2.9"	"559.6"	""	"618.0"	""	"684.5"	"8.8"	"856.9"	"890.6"	""	"829"	"34"	"36.000"	"29.000"	"0.0154001352460778"	"22"	"0.002035"	"0.0177"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSSYYR"	"[R].tITSSYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"610.32941"	"1219.65154"	"1219.65202"	"-0.40"	"-0.00024"	"6/64"	"6"	"64"	"13249017.616333"	"HCD"	"MS2"	"3.374202"	"447.5"	"66.295"	"43.6308"	"12735"	"12735"	"12716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"578.2"	""	"595.2"	""	"639.8"	""	"718.0"	"9.1"	"818.8"	"882.5"	""	"829"	"38"	"36.000"	"29.000"	"0.0065997051736271"	"22"	"0.00212"	"0.01956"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"610.33490"	"1219.66252"	"1219.66325"	"-0.60"	"-0.00036"	"7/76"	"7"	"76"	"7055576.4642334"	"HCD"	"MS2"	"2.543154"	"259.4"	"100.000"	"69.0371"	"23047"	"23047"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"354.1"	""	"376.0"	""	"410.1"	""	"390.4"	""	"427.4"	"502.4"	""	"824"	"53"	"36.000"	"29.000"	"0.000231684625978424"	"21"	"0"	"0.0001172"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"610.33508"	"1219.66289"	"1219.66325"	"-0.30"	"-0.00018"	"7/76"	"7"	"76"	"8302366.37036133"	"HCD"	"MS2"	"3.515515"	"298.6"	"100.000"	"69.4368"	"23244"	"23244"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"402.2"	""	"400.9"	""	"457.8"	""	"455.9"	""	"515.5"	"598.5"	""	"825"	"55"	"36.000"	"29.000"	"0.000142699993353275"	"20"	"0"	"0.0003006"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"610.33514"	"1219.66301"	"1219.66325"	"-0.20"	"-0.00012"	"5/76"	"5"	"76"	"708403.364013672"	"HCD"	"MS2"	"65.77791"	"35.3"	"100.000"	"69.9281"	"23409"	"23409"	"23388"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.8"	""	"38.0"	""	"45.8"	""	"68.7"	""	"65.3"	"66.9"	""	"825"	"10"	"36.000"	"29.000"	"4.16316815506632"	"16"	"0.0065"	"0.08058"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"610.33521"	"1219.66313"	"1219.66325"	"-0.10"	"-0.00006"	"7/76"	"7"	"76"	"2019890.06958008"	"HCD"	"MS2"	"29.37986"	"88.7"	"100.000"	"69.7224"	"23359"	"23359"	"23340"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.0"	""	"124.0"	""	"135.6"	""	"148.4"	""	"159.0"	"175.7"	""	"825"	"38"	"36.000"	"29.000"	"0.00662863266867812"	"17"	"0.0001686"	"0.001816"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"610.33527"	"1219.66326"	"1219.66325"	"0.00"	"0.00000"	"6/76"	"6"	"76"	"2539982.6541748"	"HCD"	"MS2"	"19.04256"	"111.0"	"100.000"	"69.6308"	"23288"	"23288"	"23267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.1"	"2.5"	"144.4"	""	"157.6"	""	"185.0"	""	"204.7"	"221.6"	""	"825"	"38"	"36.000"	"29.000"	"0.00670538861747074"	"19"	"0.0001686"	"0.001511"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"610.33527"	"1219.66326"	"1219.66325"	"0.00"	"0.00000"	"7/76"	"7"	"76"	"8482581.51373291"	"HCD"	"MS2"	"1.552049"	"291.9"	"100.000"	"69.1352"	"23121"	"23121"	"23104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"405.9"	""	"418.6"	""	"446.4"	""	"466.1"	""	"479.7"	"547.1"	""	"825"	"55"	"36.000"	"29.000"	"0.000143028950811669"	"20"	"0"	"0.0001026"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGNPFDSR"	"[R].vVGNPFDSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"610.33527"	"1219.66326"	"1219.66325"	"0.00"	"0.00000"	"7/76"	"7"	"76"	"9062503.85461426"	"HCD"	"MS2"	"3.079483"	"323.4"	"100.000"	"69.3407"	"23170"	"23170"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"440.1"	""	"444.3"	""	"536.5"	""	"477.0"	""	"570.8"	"599.4"	""	"825"	"52"	"36.000"	"29.000"	"0.000232500533028206"	"20"	"0.0001686"	"0.001152"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSLLSTDR"	"[R].aQSLLSTDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"610.34448"	"1219.68169"	"1219.68438"	"-2.21"	"-0.00135"	"8/88"	"8"	"88"	"3951565.61602783"	"HCD"	"MS2"	"4.276436"	"194.4"	"100.000"	"46.1967"	"13780"	"13780"	"13761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.0"	""	"217.0"	""	"250.8"	""	"349.3"	"17.6"	"381.4"	"343.6"	""	"846"	"46"	"36.000"	"29.000"	"0.00112808121509259"	"24"	"0"	"0.0002486"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSLLSTDR"	"[R].aQSLLSTDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"610.34485"	"1219.68242"	"1219.68438"	"-1.61"	"-0.00098"	"8/88"	"8"	"88"	"4097538.94848633"	"HCD"	"MS2"	"1.769119"	"199.5"	"100.000"	"45.8989"	"13693"	"13693"	"13669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.5"	""	"226.9"	""	"259.4"	""	"338.8"	"8.0"	"394.1"	"375.9"	""	"843"	"46"	"36.000"	"29.000"	"0.00103943558064427"	"24"	"0"	"8.096E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITSADTVR"	"[K].qITSADTVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"610.34589"	"1219.68450"	"1219.68438"	"0.09"	"0.00006"	"7/88"	"7"	"88"	"1537104.19470215"	"HCD"	"MS2"	"33.96203"	"112.2"	"100.000"	"32.8696"	"8372"	"8372"	"8345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.1"	""	"118.4"	""	"137.0"	""	"191.6"	""	"227.6"	"235.1"	""	"817"	"33"	"36.000"	"29.000"	"0.0196422873841714"	"17"	"9.9E-05"	"0.000759"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITSADTVR"	"[K].qITSADTVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"610.34674"	"1219.68620"	"1219.68438"	"1.50"	"0.00091"	"7/88"	"7"	"88"	"1543323.03741455"	"HCD"	"MS2"	"27.18451"	"113.7"	"100.000"	"32.7453"	"8359"	"8359"	"8331"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.8"	""	"127.2"	""	"135.3"	""	"189.7"	""	"240.9"	"229.3"	""	"874"	"36"	"36.000"	"29.000"	"0.0108512916701417"	"20"	"0.0001991"	"0.003515"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQLFIQR"	"[K].dAQLFIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"610.35260"	"1219.69792"	"1219.69964"	"-1.41"	"-0.00086"	"5/66"	"5"	"66"	"7291004.51257324"	"HCD"	"MS2"	"11.62603"	"302.5"	"100.000"	"67.2633"	"22328"	"22328"	"22311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"541.2"	""	"387.1"	""	"416.0"	""	"478.4"	""	"517.2"	"521.0"	""	"771"	"31"	"35.000"	"28.000"	"0.029243165517375"	"21"	"0.001718"	"0.01524"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGAAEVQR"	"[K].lFGAAEVQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"610.35266"	"1219.69805"	"1219.69964"	"-1.31"	"-0.00080"	"7/66"	"7"	"66"	"2513280.49859619"	"HCD"	"MS2"	"31.82674"	"138.6"	"100.000"	"66.6801"	"22123"	"22123"	"22114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.1"	""	"119.6"	""	"249.1"	""	"128.9"	""	"274.2"	"424.4"	""	"771"	"41"	"35.000"	"28.000"	"0.00338083816550871"	"21"	"0"	"0.000219"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQLFIQR"	"[K].dAQLFIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"610.35278"	"1219.69829"	"1219.69964"	"-1.11"	"-0.00067"	"6/66"	"6"	"66"	"3764633.30151367"	"HCD"	"MS2"	"3.322116"	"160.3"	"100.000"	"67.5751"	"22485"	"22485"	"22470"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.8"	""	"191.0"	""	"198.5"	""	"270.1"	""	"295.2"	"283.4"	""	"771"	"46"	"35.000"	"28.000"	"0.00104960135426404"	"24"	"0.0001686"	"0.001847"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQLFIQR"	"[K].dAQLFIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"610.35291"	"1219.69853"	"1219.69964"	"-0.90"	"-0.00055"	"5/66"	"5"	"66"	"7500731.10595703"	"HCD"	"MS2"	"10.53881"	"307.7"	"100.000"	"67.2874"	"22369"	"22369"	"22352"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"556.5"	""	"376.2"	""	"427.4"	""	"509.9"	""	"515.9"	"527.1"	""	"764"	"35"	"35.000"	"28.000"	"0.0117506898323095"	"21"	"0.001488"	"0.01213"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGEFQLR"	"[K].lQGEFQLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"610.35309"	"1219.69890"	"1219.69964"	"-0.60"	"-0.00037"	"6/68"	"6"	"68"	"1355438.73425293"	"HCD"	"MS2"	"20.09103"	"66.4"	"100.000"	"77.5645"	"26504"	"26504"	"26487"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.0"	""	"93.1"	""	"88.2"	""	"109.4"	"0.5"	"129.1"	"122.0"	""	"754"	"31"	"35.000"	"28.000"	"0.0293995951667269"	"23"	"0.0001991"	"0.004092"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGAAEVQR"	"[K].lFGAAEVQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"610.35309"	"1219.69890"	"1219.69964"	"-0.60"	"-0.00037"	"7/66"	"7"	"66"	"4105120.36486816"	"HCD"	"MS2"	"30.23719"	"195.8"	"100.000"	"66.9879"	"22248"	"22248"	"22235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.1"	""	"182.1"	""	"341.0"	""	"181.3"	""	"368.4"	"591.7"	""	"754"	"32"	"35.000"	"28.000"	"0.0258429061372653"	"21"	"0.0001686"	"0.001109"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQLFIQR"	"[K].dAQLFIQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"610.35309"	"1219.69890"	"1219.69964"	"-0.60"	"-0.00037"	"6/66"	"6"	"66"	"4338071.76922607"	"HCD"	"MS2"	"8.368336"	"176.2"	"100.000"	"67.5441"	"22442"	"22442"	"22427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.5"	""	"223.6"	""	"232.0"	""	"277.6"	""	"312.3"	"320.8"	""	"754"	"46"	"35.000"	"28.000"	"0.00101470862108045"	"24"	"0.0001991"	"0.004686"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGEFQLR"	"[K].lQGEFQLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"610.35315"	"1219.69902"	"1219.69964"	"-0.50"	"-0.00031"	"6/68"	"6"	"68"	"1616982.60827637"	"HCD"	"MS2"	"17.12019"	"80.8"	"100.000"	"77.6794"	"26577"	"26577"	"26567"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.0"	""	"96.9"	""	"109.0"	""	"132.5"	"0.0"	"151.5"	"157.2"	""	"756"	"32"	"35.000"	"28.000"	"0.0265150102802749"	"23"	"0.0001991"	"0.003968"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGEFQLR"	"[K].lQGEFQLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"610.35333"	"1219.69939"	"1219.69964"	"-0.20"	"-0.00012"	"5/68"	"5"	"68"	"2260192.24591064"	"HCD"	"MS2"	"19.56796"	"116.7"	"100.000"	"77.9875"	"26702"	"26702"	"26685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.0"	""	"142.7"	""	"156.8"	""	"193.9"	"0.5"	"207.1"	"233.1"	""	"756"	"33"	"35.000"	"28.000"	"0.0208205309241242"	"23"	"0.0001991"	"0.00529"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQGEFQLR"	"[K].lQGEFQLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"610.35352"	"1219.69975"	"1219.69964"	"0.10"	"0.00006"	"6/68"	"6"	"68"	"2583144.75787354"	"HCD"	"MS2"	"16.30303"	"132.8"	"100.000"	"77.8747"	"26629"	"26629"	"26613"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.3"	""	"174.2"	""	"195.0"	""	"221.1"	"1.4"	"222.7"	"251.6"	""	"754"	"30"	"35.000"	"28.000"	"0.0354275688082869"	"25"	"0.0001991"	"0.004151"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFGAAEVQR"	"[K].lFGAAEVQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"610.35370"	"1219.70012"	"1219.69964"	"0.40"	"0.00024"	"7/66"	"7"	"66"	"3980743.15533447"	"HCD"	"MS2"	"27.31522"	"194.1"	"100.000"	"66.9709"	"22209"	"22209"	"22192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.4"	""	"189.7"	""	"341.6"	""	"183.4"	""	"371.6"	"574.0"	""	"748"	"32"	"35.000"	"28.000"	"0.0244833929101161"	"21"	"9.9E-05"	"0.0009364"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPFAPK"	"[K].sDPFAPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"610.35693"	"1219.70659"	"1219.70869"	"-1.73"	"-0.00105"	"4/50"	"4"	"50"	"2026116.37304688"	"HCD"	"MS2"	"48.73432"	"172.8"	"100.000"	"57.0743"	"18224"	"18224"	"18209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.0"	""	"210.0"	""	"210.2"	""	"309.2"	"3.5"	"338.5"	"325.4"	""	"774"	"13"	"35.000"	"28.000"	"1.94854735600919"	"19"	"0.006925"	"0.08683"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDPFAPK"	"[K].sDPFAPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"Q5M7V8"	"Thyroid hormone receptor-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Thrap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"610.35730"	"1219.70732"	"1219.70869"	"-1.12"	"-0.00069"	"4/50"	"4"	"50"	"2012698.793396"	"HCD"	"MS2"	"54.89278"	"175.2"	"100.000"	"57.3255"	"18291"	"18291"	"18280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"249.0"	""	"206.6"	""	"241.9"	""	"283.3"	""	"349.0"	"334.1"	""	"767"	"11"	"35.000"	"28.000"	"2.90914500023692"	"20"	"0.006423"	"0.07994"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPSVEK"	"[K].mAPSVEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"610.35919"	"1219.71111"	"1219.71207"	"-0.79"	"-0.00048"	"6/52"	"6"	"52"	"2693697.30303955"	"HCD"	"MS2"	"9.152555"	"199.8"	"100.000"	"45.2454"	"13426"	"13426"	"13404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.9"	""	"249.7"	""	"269.3"	""	"243.6"	""	"435.9"	"419.3"	""	"681"	"30"	"35.000"	"28.000"	"0.031125555872062"	"24"	"0.001615"	"0.01339"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPSVEK"	"[K].mAPSVEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"610.35931"	"1219.71135"	"1219.71207"	"-0.59"	"-0.00036"	"6/52"	"6"	"52"	"2180920.45245361"	"HCD"	"MS2"	"23.46436"	"131.3"	"100.000"	"45.4789"	"13487"	"13487"	"13464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.0"	""	"161.2"	""	"161.8"	""	"180.4"	""	"280.6"	"289.1"	""	"677"	"32"	"35.000"	"28.000"	"0.0207280607598836"	"24"	"0.001261"	"0.009556"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDGTVK"	"[K].iEDGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"610.36749"	"1219.72771"	"1219.72982"	"-1.73"	"-0.00106"	"6/54"	"6"	"54"	"5797239.56481934"	"HCD"	"MS2"	"10.65509"	"426.1"	"100.000"	"44.4300"	"13061"	"13061"	"13041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"559.2"	""	"489.1"	""	"557.0"	""	"703.5"	""	"842.4"	"899.4"	""	"625"	"34"	"34.000"	"27.000"	"0.0132388426890482"	"24"	"0.00212"	"0.0195"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDDALK"	"[K].sLDDALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"610.36816"	"1219.72905"	"1219.72982"	"-0.63"	"-0.00039"	"6/54"	"6"	"54"	"1336015.19061279"	"HCD"	"MS2"	"27.67897"	"111.8"	"100.000"	"64.8087"	"21365"	"21365"	"21351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.8"	""	"141.4"	""	"169.4"	""	"152.6"	""	"232.0"	"226.7"	""	"626"	"36"	"34.000"	"27.000"	"0.0086009086992105"	""	"0.0008247"	"0.007588"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEDLSK"	"[R].lGEDLSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"3"	"610.36816"	"1219.72905"	"1219.72982"	"-0.63"	"-0.00039"	"4/54"	"4"	"54"	"2061499.76690674"	"HCD"	"MS2"	"33.72029"	"158.3"	"100.000"	"60.3724"	"19566"	"19566"	"19552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.7"	""	"188.2"	""	"186.8"	""	"270.2"	""	"317.6"	"325.4"	""	"626"	"21"	"34.000"	"27.000"	"0.231496451093228"	"23"	"0.002628"	"0.02756"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEDLSK"	"[R].lGEDLSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"610.36816"	"1219.72905"	"1219.72982"	"-0.63"	"-0.00039"	"5/54"	"5"	"54"	"4483177.27410889"	"HCD"	"MS2"	"17.71325"	"357.1"	"100.000"	"60.6717"	"19688"	"19688"	"19673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"454.3"	""	"398.6"	""	"417.0"	""	"636.2"	""	"757.6"	"731.1"	""	"626"	"24"	"34.000"	"27.000"	"0.135376829113958"	"26"	"0.003568"	"0.03952"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDGTVK"	"[K].iEDGTVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"610.36829"	"1219.72930"	"1219.72982"	"-0.43"	"-0.00026"	"6/54"	"6"	"54"	"5657792.28112793"	"HCD"	"MS2"	"32.23265"	"431.5"	"100.000"	"44.2104"	"13007"	"13007"	"12985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"578.9"	""	"514.1"	""	"581.2"	""	"705.3"	"1.2"	"842.9"	"870.1"	""	"617"	"22"	"34.000"	"27.000"	"0.190658059442701"	"22"	"0.003786"	"0.04081"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDDALK"	"[K].sLDDALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"610.36835"	"1219.72942"	"1219.72982"	"-0.33"	"-0.00020"	"6/54"	"6"	"54"	"1536314.38970947"	"HCD"	"MS2"	"9.287584"	"125.0"	"100.000"	"64.7205"	"21296"	"21296"	"21279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.3"	""	"160.0"	""	"170.7"	""	"178.7"	""	"235.6"	"252.1"	""	"617"	"36"	"34.000"	"27.000"	"0.00822725898004876"	""	"0.001103"	"0.009197"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEDLSK"	"[R].lGEDLSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"610.36859"	"1219.72991"	"1219.72982"	"0.07"	"0.00004"	"5/54"	"5"	"54"	"2030146.22845459"	"HCD"	"MS2"	"39.35913"	"153.1"	"100.000"	"60.4789"	"19576"	"19576"	"19556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.0"	""	"178.9"	""	"188.4"	""	"284.1"	""	"311.5"	"300.4"	""	"617"	"20"	"34.000"	"27.000"	"0.342180430508451"	"22"	"0.002189"	"0.02105"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEDLSK"	"[R].lGEDLSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"610.36859"	"1219.72991"	"1219.72982"	"0.07"	"0.00004"	"5/54"	"5"	"54"	"4567387.8460083"	"HCD"	"MS2"	"19.16243"	"347.1"	"100.000"	"60.7755"	"19697"	"19697"	"19679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"449.4"	""	"374.6"	""	"395.3"	""	"595.1"	""	"744.3"	"745.3"	""	"617"	"20"	"34.000"	"27.000"	"0.326028201592413"	"26"	"0.003255"	"0.0349"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTGNSILGR"	"[K].sSTGNSILGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"610.84277"	"1220.67827"	"1220.67963"	"-1.11"	"-0.00068"	"6/92"	"6"	"92"	"1898522.10845947"	"HCD"	"MS2"	"17.05707"	"130.8"	"100.000"	"36.2523"	"9743"	"9743"	"9722"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.0"	""	"164.2"	""	"179.8"	""	"233.5"	"0.0"	"247.1"	"248.1"	""	"800"	"28"	"36.000"	"29.000"	"0.0598494262437774"	"21"	"0"	"0.0001132"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTGNSILGR"	"[K].sSTGNSILGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"610.84302"	"1220.67876"	"1220.67963"	"-0.71"	"-0.00044"	"9/92"	"9"	"92"	"8725357.34173584"	"HCD"	"MS2"	"12.00763"	"403.4"	"100.000"	"35.9543"	"9622"	"9622"	"9605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"533.7"	""	"582.5"	""	"609.1"	""	"606.5"	""	"773.0"	"721.8"	""	"807"	"43"	"36.000"	"29.000"	"0.00182744173491111"	"21"	"0"	"0.0001111"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTGNSILGR"	"[K].sSTGNSILGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"Q8K3K9"	"GTPase IMAP family member 4 OS=Rattus norvegicus OX=10116 GN=Gimap4 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"610.84332"	"1220.67937"	"1220.67963"	"-0.21"	"-0.00013"	"7/92"	"7"	"92"	"9759918.82928467"	"HCD"	"MS2"	"10.06739"	"450.1"	"100.000"	"35.8652"	"9623"	"9623"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"589.0"	""	"652.6"	""	"685.9"	""	"705.6"	""	"824.7"	"813.9"	""	"797"	"47"	"36.000"	"29.000"	"0.000723482991615095"	"23"	"0"	"8.366E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEAIQLR"	"[R].fDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"610.84491"	"1220.68254"	"1220.68365"	"-0.91"	"-0.00056"	"9/62"	"9"	"62"	"894726.602539063"	"HCD"	"MS2"	"10.90032"	"45.1"	"100.000"	"87.7149"	"30637"	"30637"	"30620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.8"	""	"59.5"	""	"59.4"	""	"77.5"	""	"85.6"	"90.1"	""	"782"	"27"	"35.000"	"28.000"	"0.0861344247053901"	"21"	"0.0001991"	"0.002633"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELNFLAR"	"[K].eELNFLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"610.84509"	"1220.68291"	"1220.68365"	"-0.61"	"-0.00037"	"4/66"	"4"	"66"	"592890.278137207"	"HCD"	"MS2"	"38.19064"	"31.6"	"100.000"	"90.5473"	"31778"	"31778"	"31764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.7"	""	"39.2"	""	"39.6"	""	"36.9"	"0.9"	"89.8"	"49.3"	""	"769"	"16"	"35.000"	"28.000"	"0.926608637329995"	"28"	"0.002035"	"0.01829"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEAIQLR"	"[R].fDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"610.84552"	"1220.68376"	"1220.68365"	"0.09"	"0.00006"	"7/62"	"7"	"62"	"1323016.50878906"	"HCD"	"MS2"	"13.18847"	"66.3"	"100.000"	"87.4175"	"30517"	"30517"	"30498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.5"	""	"74.7"	""	"90.2"	""	"118.5"	""	"126.8"	"126.2"	""	"765"	"21"	"35.000"	"28.000"	"0.331612917477518"	"20"	"0.0001991"	"0.004998"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELNFLAR"	"[K].eELNFLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"610.84558"	"1220.68389"	"1220.68365"	"0.19"	"0.00012"	"5/66"	"5"	"66"	"563024.220275879"	"HCD"	"MS2"	"28.50931"	"33.7"	"100.000"	"90.5736"	"31750"	"31750"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.7"	""	"47.0"	""	"48.1"	""	"47.6"	"0.8"	"66.8"	"57.3"	""	"765"	"26"	"35.000"	"28.000"	"0.106569134700089"	"25"	"0.002559"	"0.02598"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDEAIQLR"	"[R].fDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"610.84583"	"1220.68437"	"1220.68365"	"0.59"	"0.00036"	"7/62"	"7"	"62"	"1279171.57397461"	"HCD"	"MS2"	"6.599964"	"65.3"	"100.000"	"87.6859"	"30590"	"30590"	"30572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"81.2"	""	"84.0"	""	"112.2"	"0.6"	"129.9"	"120.6"	""	"768"	"32"	"35.000"	"28.000"	"0.0266889337954098"	"22"	"0.0001686"	"0.001768"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELNFLAR"	"[K].eELNFLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"Q4QQS3"	"Protein OSCP1 OS=Rattus norvegicus OX=10116 GN=Oscp1 PE=2 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"610.84644"	"1220.68559"	"1220.68365"	"1.59"	"0.00097"	"7/66"	"7"	"66"	"436906.379089355"	"HCD"	"MS2"	"58.28433"	"24.0"	"100.000"	"90.3501"	"31661"	"31661"	"31642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"35.4"	""	"26.5"	""	"43.4"	""	"39.6"	"45.1"	""	"769"	"13"	"35.000"	"28.000"	"1.93150725671358"	"21"	"0.002711"	"0.02831"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITTMQLER"	"[R].iTTMQLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"610.84662"	"1220.68596"	"1220.68702"	"-0.87"	"-0.00053"	"6/72"	"6"	"72"	"1027120.20629883"	"HCD"	"MS2"	"6.049386"	"69.0"	"100.000"	"61.7909"	"20107"	"20107"	"20084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"89.1"	""	"100.3"	""	"72.8"	"1.9"	"154.7"	"133.6"	""	"773"	"26"	"35.000"	"28.000"	"0.100496167116338"	"20"	"0.001049"	"0.008855"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITTMQLER"	"[R].iTTMQLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"610.84698"	"1220.68669"	"1220.68702"	"-0.27"	"-0.00017"	"9/72"	"9"	"72"	"942491.146911621"	"HCD"	"MS2"	"11.04795"	"67.9"	"100.000"	"62.0969"	"20230"	"20230"	"20215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.4"	""	"84.0"	""	"99.0"	""	"94.5"	""	"143.6"	"138.1"	""	"752"	"19"	"35.000"	"28.000"	"0.494524536904282"	"18"	"0.0007633"	"0.007315"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITTMQLER"	"[R].iTTMQLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"610.84705"	"1220.68682"	"1220.68702"	"-0.17"	"-0.00010"	"6/72"	"6"	"72"	"876194.413696289"	"HCD"	"MS2"	"16.5805"	"58.2"	"100.000"	"61.6801"	"20095"	"20095"	"20070"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.0"	""	"73.2"	""	"80.4"	""	"80.1"	"2.1"	"110.9"	"120.3"	""	"753"	"27"	"35.000"	"28.000"	"0.0795728623498498"	"19"	"0.0001991"	"0.0037"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITTMQLER"	"[R].iTTMQLER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"610.84705"	"1220.68682"	"1220.68702"	"-0.17"	"-0.00010"	"6/72"	"6"	"72"	"1066813.12164307"	"HCD"	"MS2"	"4.388899"	"70.1"	"100.000"	"61.9730"	"20213"	"20213"	"20193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.6"	""	"91.0"	""	"99.2"	""	"94.4"	""	"141.6"	"148.8"	""	"753"	"28"	"35.000"	"28.000"	"0.0553050743532916"	"22"	"0.0001991"	"0.005932"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEAEK"	"[R].aQSEAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.1935"	"0.0000"	"1"	"1"	"1"	"610.84741"	"1220.68755"	"1220.68869"	"-0.93"	"-0.00057"	"6/64"	"6"	"64"	"963020.297912598"	"HCD"	"MS2"	"0"	"89.4"	"100.000"	"23.6256"	"4674"	"4674"	"4665"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.8"	""	"93.3"	""	"98.8"	""	"145.4"	""	"192.5"	"197.2"	""	"743"	"31"	"35.000"	"28.000"	"0.0280516762577709"	""	"0.002189"	"0.02132"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAAWAK"	"[K].nTAAWAk.[D]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"610.85474"	"1220.70220"	"1220.70394"	"-1.43"	"-0.00087"	"6/60"	"6"	"60"	"2324285.07080078"	"HCD"	"MS2"	"46.60384"	"205.6"	"100.000"	"51.1139"	"15808"	"15808"	"15782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"328.8"	""	"291.5"	""	"276.6"	""	"295.8"	""	"333.7"	"426.5"	""	"704"	"21"	"35.000"	"28.000"	"0.265792464138233"	"23"	"0.003704"	"0.04018"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAAWAK"	"[K].nTAAWAk.[D]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"610.85486"	"1220.70244"	"1220.70394"	"-1.23"	"-0.00075"	"10/60"	"10"	"60"	"1998860.64923096"	"HCD"	"MS2"	"31.23668"	"183.6"	"100.000"	"51.4556"	"15910"	"15910"	"15885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"292.5"	""	"252.0"	""	"258.0"	""	"266.0"	""	"294.5"	"380.7"	""	"703"	"31"	"35.000"	"28.000"	"0.0301943252809147"	"25"	"0.002525"	"0.02467"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSINDK"	"[K].vSSINDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"610.86554"	"1220.72380"	"1220.72507"	"-1.04"	"-0.00064"	"6/60"	"6"	"60"	"4851506.48455811"	"HCD"	"MS2"	"6.556258"	"360.2"	"100.000"	"40.5192"	"11472"	"11472"	"11458"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"429.9"	""	"439.1"	""	"445.2"	""	"550.8"	""	"718.0"	"841.1"	""	"553"	"34"	"34.000"	"27.000"	"0.0112900310320989"	"21"	"0.001951"	"0.017"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSINDK"	"[K].vSSINDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"610.86584"	"1220.72441"	"1220.72507"	"-0.54"	"-0.00033"	"6/60"	"6"	"60"	"4861157.50549316"	"HCD"	"MS2"	"2.428955"	"355.7"	"100.000"	"40.4213"	"11467"	"11467"	"11450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"411.9"	""	"430.2"	""	"438.3"	""	"507.6"	""	"755.2"	"844.7"	""	"517"	"36"	"34.000"	"27.000"	"0.00684637285829832"	"21"	"0.001951"	"0.0172"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNSVVK"	"[R].eSNSVVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"610.86591"	"1220.72453"	"1220.72507"	"-0.44"	"-0.00027"	"6/62"	"6"	"62"	"933818.807312012"	"HCD"	"MS2"	"0"	"86.5"	"100.000"	"30.6205"	"7472"	"7472"	"7459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.2"	""	"93.8"	""	"106.5"	""	"149.5"	""	"166.4"	"156.2"	""	"517"	"33"	"34.000"	"27.000"	"0.0136603097583884"	"24"	"0.0001991"	"0.005328"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNSVVK"	"[R].eSNSVVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"610.86597"	"1220.72466"	"1220.72507"	"-0.34"	"-0.00021"	"6/62"	"6"	"62"	"947475.870605469"	"HCD"	"MS2"	"0"	"91.7"	"100.000"	"30.4729"	"7453"	"7453"	"7438"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.0"	""	"102.6"	""	"108.7"	""	"160.8"	""	"183.7"	"173.9"	""	"517"	"35"	"34.000"	"27.000"	"0.00838417910848068"	"25"	"0.000264"	"0.006088"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GTASVAEK"	"[R].gTASVAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"0"	"2"	"2"	"0.0476"	"0.0000"	"1"	"1"	"1"	"610.86597"	"1220.72466"	"1220.72507"	"-0.34"	"-0.00021"	"7/66"	"7"	"66"	"2066560.03778076"	"HCD"	"MS2"	"14.38711"	"165.0"	"100.000"	"30.8909"	"7577"	"7577"	"7565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.6"	""	"176.4"	""	"195.1"	""	"320.4"	""	"326.7"	"327.6"	""	"517"	"21"	"34.000"	"27.000"	"0.214516423402478"	"21"	"0.005426"	"0.06904"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSINDK"	"[K].vSSINDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"610.86609"	"1220.72490"	"1220.72507"	"-0.14"	"-0.00009"	"6/60"	"6"	"60"	"1383239.76794434"	"HCD"	"MS2"	"15.67942"	"123.3"	"100.000"	"40.2228"	"11352"	"11352"	"11327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.0"	""	"151.6"	""	"147.1"	""	"190.3"	""	"248.7"	"279.2"	""	"517"	"23"	"34.000"	"27.000"	"0.118702686318331"	"20"	"0.001488"	"0.01202"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTASVAEK"	"[R].gTASVAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"Q499V8"	"Specifically androgen-regulated gene protein OS=Rattus norvegicus OX=10116 GN=Sarg PE=1 SV=2"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"610.86646"	"1220.72563"	"1220.72507"	"0.46"	"0.00028"	"7/66"	"7"	"66"	"2233723.01837158"	"HCD"	"MS2"	"5.306774"	"182.0"	"100.000"	"30.7640"	"7564"	"7564"	"7553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.7"	""	"202.0"	""	"214.2"	""	"347.5"	""	"367.4"	"361.6"	""	"517"	"23"	"34.000"	"27.000"	"0.142383789520797"	""	"0.0001991"	"0.002918"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSINDK"	"[K].vSSINDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"610.86719"	"1220.72710"	"1220.72507"	"1.66"	"0.00101"	"6/60"	"6"	"60"	"1087090.9710083"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"40.1016"	"11337"	"11337"	"11311"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.1"	""	"118.6"	""	"117.1"	""	"155.9"	""	"171.5"	"199.7"	""	"514"	"22"	"34.000"	"27.000"	"0.178621249620321"	"18"	"0.001615"	"0.01464"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLDLER"	"[K].yPSLDLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"611.33533"	"1221.66338"	"1221.66767"	"-3.51"	"-0.00215"	"6/64"	"6"	"64"	"1003691.57141113"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"77.2321"	"26370"	"26370"	"26355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.5"	""	"67.1"	""	"75.1"	""	"69.8"	""	"95.6"	"74.8"	""	"751"	"20"	"35.000"	"28.000"	"0.416495143131032"	"17"	"0.001615"	"0.01439"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLDLER"	"[K].yPSLDLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"611.33661"	"1221.66594"	"1221.66767"	"-1.41"	"-0.00086"	"7/64"	"7"	"64"	"1022150.67901611"	"HCD"	"MS2"	"25.73589"	"48.2"	"100.000"	"77.3105"	"26431"	"26431"	"26417"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.2"	""	"70.2"	""	"65.2"	""	"76.6"	"0.3"	"95.4"	"90.5"	""	"779"	"22"	"35.000"	"28.000"	"0.219536866944209"	"18"	"0.0005161"	"0.006496"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLDLER"	"[K].yPSLDLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.33667"	"1221.66606"	"1221.66767"	"-1.31"	"-0.00080"	"6/64"	"6"	"64"	"2221397.00610352"	"HCD"	"MS2"	"51.52354"	"85.2"	"100.000"	"76.9412"	"26255"	"26255"	"26243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.6"	""	"109.5"	""	"135.4"	""	"139.8"	""	"173.8"	"135.4"	""	"779"	"22"	"35.000"	"28.000"	"0.234696958775962"	"14"	"0.0001991"	"0.00473"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPSLDLER"	"[K].yPSLDLER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.33728"	"1221.66728"	"1221.66767"	"-0.31"	"-0.00019"	"6/64"	"6"	"64"	"2105175.06347656"	"HCD"	"MS2"	"64.10952"	"79.5"	"100.000"	"77.0158"	"26317"	"26317"	"26303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.1"	""	"115.8"	""	"117.5"	""	"115.6"	""	"168.1"	"122.8"	""	"765"	"22"	"35.000"	"28.000"	"0.230479041673442"	"14"	"0.0001991"	"0.002777"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASNTEK"	"[K].nASNTEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"611.34436"	"1221.68144"	"1221.68394"	"-2.04"	"-0.00125"	"6/66"	"6"	"66"	"739110.593322754"	"HCD"	"MS2"	"0"	"66.7"	"100.000"	"20.7253"	"3602"	"3602"	"3579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.9"	""	"80.4"	""	"86.6"	""	"123.6"	"0.3"	"127.3"	"106.2"	""	"779"	"23"	"35.000"	"28.000"	"0.175593106418898"	""	"0.001951"	"0.01668"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASNTEK"	"[K].nASNTEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"611.34515"	"1221.68303"	"1221.68394"	"-0.74"	"-0.00045"	"6/66"	"6"	"66"	"518740.610961914"	"HCD"	"MS2"	"0"	"44.4"	"100.000"	"20.7695"	"3583"	"3583"	"3552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.0"	""	"56.6"	""	"50.6"	""	"78.4"	"1.3"	"82.0"	"80.1"	""	"756"	"13"	"35.000"	"28.000"	"1.80506065442607"	"21"	"0.006845"	"0.08548"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNHFDR"	"[R].aSFNHFDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"611.81091"	"1222.61455"	"1222.61664"	"-1.71"	"-0.00104"	"5/74"	"5"	"74"	"1240416.02044678"	"HCD"	"MS2"	"14.78374"	"106.4"	"100.000"	"33.9835"	"8826"	"8826"	"8802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.8"	""	"113.9"	""	"110.5"	""	"173.6"	"4.6"	"239.9"	"239.9"	""	"599"	"15"	"34.000"	"27.000"	"1.01717769140827"	"18"	"0.002328"	"0.02227"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNHFDR"	"[R].aSFNHFDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"408.20990"	"1222.61515"	"1222.61664"	"-1.22"	"-0.00050"	"7/74"	"7"	"74"	"12186682.84375"	"HCD"	"MS2"	"15.36392"	"362.2"	"100.000"	"33.7835"	"8782"	"8782"	"8761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"470.8"	""	"372.6"	""	"348.3"	""	"548.2"	""	"774.6"	"938.6"	""	"596"	"35"	"34.000"	"27.000"	"0.00955468258702629"	"17"	"0.0001991"	"0.003014"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFNHFDR"	"[R].aSFNHFDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"408.21011"	"1222.61579"	"1222.61664"	"-0.69"	"-0.00028"	"7/74"	"7"	"74"	"11956761.2455444"	"HCD"	"MS2"	"14.5368"	"352.1"	"99.579"	"33.8966"	"8790"	"8790"	"8771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"424.9"	""	"363.5"	""	"335.0"	""	"548.2"	""	"752.6"	"929.6"	""	"590"	"33"	"34.000"	"27.000"	"0.013268505719352"	"15"	"0.001316"	"0.01032"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKFETEQALR"	"[R].TKFETEQALR.[M]"	""	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"2"	"2"	"0.2889"	"0.0000"	"1"	"1"	"1"	"611.83466"	"1222.66203"	"1222.64263"	"15.87"	"0.00970"	"7/98"	"7"	"98"	"2372133.01428223"	"HCD"	"MS2"	"22.62275"	"150.2"	"100.000"	"50.5047"	"15560"	"15560"	"15539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.7"	""	"160.3"	""	"173.8"	""	"276.5"	"3.3"	"310.5"	"341.6"	"NoQuanLabels"	"736"	"45"	"35.000"	"28.000"	"0.00105888261662273"	"24"	"0.008893"	"0.113"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEGEATLR"	"[K].fAEGEATLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"611.83472"	"1222.66216"	"1222.66292"	"-0.62"	"-0.00038"	"7/72"	"7"	"72"	"1274339.2230835"	"HCD"	"MS2"	"11.38507"	"82.7"	"100.000"	"53.0185"	"16545"	"16545"	"16522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.7"	""	"133.4"	""	"109.5"	""	"123.6"	"1.2"	"144.9"	"151.2"	""	"747"	"43"	"35.000"	"28.000"	"0.00194218504705268"	"18"	"0"	"0.0002102"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"611.83478"	"1222.66228"	"1222.66292"	"-0.52"	"-0.00032"	"6/80"	"6"	"80"	"337960.574584961"	"HCD"	"MS2"	"45.11432"	"22.8"	"100.000"	"70.6886"	"23718"	"23718"	"23696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.3"	""	"28.7"	""	"32.1"	""	"38.8"	"0.4"	"44.0"	"44.9"	""	"733"	"18"	"35.000"	"28.000"	"0.651739403779265"	"23"	"0.002035"	"0.01808"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEGEATLR"	"[K].fAEGEATLR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"611.83478"	"1222.66228"	"1222.66292"	"-0.52"	"-0.00032"	"6/72"	"6"	"72"	"1197764.2088623"	"HCD"	"MS2"	"13.97069"	"93.3"	"100.000"	"52.7194"	"16457"	"16457"	"16436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.5"	""	"160.5"	""	"132.8"	""	"124.3"	""	"151.1"	"148.9"	""	"733"	"20"	"35.000"	"28.000"	"0.384657300101076"	"16"	"0.0001991"	"0.002773"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"611.83490"	"1222.66252"	"1222.66292"	"-0.32"	"-0.00020"	"5/80"	"5"	"80"	"1502626.69854736"	"HCD"	"MS2"	"22.88249"	"65.3"	"100.000"	"70.5037"	"23676"	"23676"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.7"	""	"77.7"	""	"91.1"	""	"121.4"	""	"120.9"	"132.1"	""	"732"	"32"	"35.000"	"28.000"	"0.0244613873830113"	"24"	"0.0001686"	"0.001183"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"611.83514"	"1222.66301"	"1222.66292"	"0.08"	"0.00005"	"6/80"	"6"	"80"	"1947271.60760498"	"HCD"	"MS2"	"15.31542"	"88.1"	"100.000"	"70.1952"	"23551"	"23551"	"23533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.0"	""	"104.6"	""	"117.3"	""	"161.1"	"0.1"	"167.3"	"183.1"	""	"732"	"50"	"35.000"	"28.000"	"0.000372804448027806"	"27"	"9.9E-05"	"0.0009232"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"611.83533"	"1222.66338"	"1222.66292"	"0.38"	"0.00023"	"5/80"	"5"	"80"	"1768748.46466064"	"HCD"	"MS2"	"21.94534"	"85.1"	"100.000"	"70.3892"	"23597"	"23597"	"23582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.1"	""	"97.5"	""	"110.1"	""	"156.9"	"0.2"	"168.7"	"179.2"	""	"728"	"32"	"35.000"	"28.000"	"0.0231260459194035"	"23"	"0.0001686"	"0.001394"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDR"	"[K].nTLFLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"611.83575"	"1222.66423"	"1222.66292"	"1.08"	"0.00066"	"6/80"	"6"	"80"	"1435969.34533691"	"HCD"	"MS2"	"25.12303"	"70.6"	"100.000"	"70.0803"	"23471"	"23471"	"23448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.2"	""	"86.7"	""	"93.3"	""	"125.9"	""	"136.9"	"134.5"	""	"803"	"46"	"36.000"	"29.000"	"0.000976529909643137"	"25"	"9.9E-05"	"0.0007298"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDSISSK"	"[K].qDSISSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"611.85559"	"1222.70391"	"1222.70434"	"-0.35"	"-0.00022"	"10/68"	"10"	"68"	"4374005.60949707"	"HCD"	"MS2"	"33.57518"	"331.1"	"100.000"	"31.2866"	"7771"	"7771"	"7744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"688.4"	""	"428.8"	""	"388.2"	""	"492.2"	""	"601.0"	"535.7"	""	"640"	"20"	"35.000"	"28.000"	"0.311996684069564"	"22"	"0.004959"	"0.06267"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDSISSK"	"[K].qDSISSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"611.85583"	"1222.70439"	"1222.70434"	"0.05"	"0.00003"	"6/68"	"6"	"68"	"4246481.39935303"	"HCD"	"MS2"	"37.42124"	"336.0"	"100.000"	"31.4075"	"7782"	"7782"	"7754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"707.1"	""	"419.0"	""	"394.4"	""	"515.4"	""	"599.3"	"543.6"	""	"639"	"26"	"35.000"	"28.000"	"0.0750707686261035"	"21"	"0.002559"	"0.02555"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"612.30676"	"1223.60625"	"1223.60739"	"-0.94"	"-0.00057"	"7/82"	"7"	"82"	"1457563.62091064"	"HCD"	"MS2"	"0"	"83.8"	"100.000"	"30.0922"	"7299"	"7299"	"7287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.1"	""	"127.9"	""	"117.4"	""	"100.3"	"0.3"	"160.1"	"161.2"	""	"504"	"27"	"34.000"	"27.000"	"0.0450194868862717"	"23"	"9.9E-05"	"0.0009976"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSMQTPMR"	"[R].sGSMQTPMR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"612.30725"	"1223.60723"	"1223.60739"	"-0.14"	"-0.00008"	"10/82"	"10"	"82"	"1525364.29803467"	"HCD"	"MS2"	"0"	"88.4"	"100.000"	"30.2445"	"7321"	"7321"	"7302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.0"	""	"117.6"	""	"123.7"	""	"114.4"	""	"170.2"	"175.5"	""	"513"	"20"	"34.000"	"27.000"	"0.241594681508109"	"20"	"0.0001991"	"0.002673"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"612.32648"	"1223.64568"	"1223.64693"	"-1.03"	"-0.00063"	"5/62"	"5"	"62"	"2351160.7144165"	"HCD"	"MS2"	"34.71566"	"140.8"	"100.000"	"63.9702"	"20992"	"20992"	"20984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.3"	""	"183.3"	""	"183.8"	""	"250.1"	""	"257.6"	"259.7"	""	"624"	"13"	"34.000"	"27.000"	"1.70276452660476"	"18"	"0.001951"	"0.0173"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"612.32648"	"1223.64568"	"1223.64693"	"-1.03"	"-0.00063"	"6/62"	"6"	"62"	"2379080.72045898"	"HCD"	"MS2"	"33.92362"	"146.1"	"100.000"	"63.9457"	"21015"	"21015"	"20995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.3"	""	"183.7"	""	"194.8"	""	"235.5"	""	"254.1"	"286.3"	""	"624"	"13"	"34.000"	"27.000"	"1.52459536114964"	"19"	"0.003001"	"0.03231"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"612.32672"	"1223.64617"	"1223.64693"	"-0.63"	"-0.00038"	"5/62"	"5"	"62"	"965912.627807617"	"HCD"	"MS2"	"49.04927"	"59.4"	"100.000"	"63.6469"	"20862"	"20862"	"20834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.1"	""	"72.5"	""	"86.3"	""	"86.4"	"0.1"	"119.2"	"127.6"	""	"628"	"20"	"34.000"	"27.000"	"0.292367872896899"	"17"	"0.0001991"	"0.003222"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLDYEER"	"[R].lGLDYEER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"612.32715"	"1223.64702"	"1223.64693"	"0.07"	"0.00004"	"6/62"	"6"	"62"	"1070099.42504883"	"HCD"	"MS2"	"28.86523"	"61.1"	"100.000"	"63.6203"	"20883"	"20883"	"20857"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.7"	""	"86.6"	""	"86.4"	""	"85.2"	""	"121.5"	"126.4"	""	"616"	"33"	"34.000"	"27.000"	"0.0146066531460155"	"18"	"0.0001991"	"0.002273"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTADTFLNR"	"[R].gTADTFLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"Q6MG55"	"Protein ABHD16A OS=Rattus norvegicus OX=10116 GN=Abhd16a PE=2 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"612.33179"	"1223.65630"	"1223.65817"	"-1.53"	"-0.00093"	"7/72"	"7"	"72"	"1108600.53540039"	"HCD"	"MS2"	"42.37898"	"81.1"	"100.000"	"49.6051"	"15193"	"15193"	"15173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.9"	""	"97.2"	""	"99.6"	""	"136.4"	"0.7"	"163.8"	"172.3"	""	"651"	"29"	"35.000"	"28.000"	"0.0425158624086915"	"16"	"0"	"0.0003938"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGMLSK"	"[K].dDGMLSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"612.33655"	"1223.66582"	"1223.67059"	"-3.90"	"-0.00239"	"6/58"	"6"	"58"	"3137523.26983643"	"HCD"	"MS2"	"37.07827"	"259.4"	"100.000"	"51.5479"	"15947"	"15947"	"15926"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"424.5"	""	"337.0"	""	"305.5"	""	"355.4"	""	"530.8"	"512.1"	""	"711"	"14"	"35.000"	"28.000"	"1.29371795343222"	"17"	"0.008135"	"0.1025"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDGMLSK"	"[K].dDGMLSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"612.33691"	"1223.66655"	"1223.67059"	"-3.30"	"-0.00202"	"6/58"	"6"	"58"	"3097839.10705566"	"HCD"	"MS2"	"45.59082"	"252.8"	"100.000"	"51.2241"	"15852"	"15852"	"15839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.2"	""	"321.9"	""	"297.5"	""	"327.7"	""	"503.0"	"518.4"	""	"704"	"15"	"35.000"	"28.000"	"1.07039152903805"	"18"	"0.006384"	"0.07977"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGDVK"	"[K].eMSGDVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"612.33813"	"1223.66899"	"1223.67059"	"-1.31"	"-0.00080"	"10/56"	"10"	"56"	"10486095.6534424"	"HCD"	"MS2"	"1.003357"	"796.4"	"100.000"	"37.0216"	"10053"	"10053"	"10036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1382.6"	""	"1077.3"	""	"1111.1"	""	"1086.6"	""	"1405.3"	"1477.8"	""	"686"	"27"	"35.000"	"28.000"	"0.0632840288778559"	""	"0.004819"	"0.05781"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGDVK"	"[K].eMSGDVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"612.33844"	"1223.66960"	"1223.67059"	"-0.81"	"-0.00050"	"6/56"	"6"	"56"	"10223901.1973877"	"HCD"	"MS2"	"0"	"754.8"	"100.000"	"36.9185"	"10048"	"10048"	"10026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1300.2"	""	"1038.0"	""	"1044.6"	""	"1002.1"	""	"1365.4"	"1402.7"	""	"686"	"38"	"35.000"	"28.000"	"0.00608546991945327"	""	"0.002673"	"0.02822"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGDVK"	"[K].eMSGDVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"612.33875"	"1223.67021"	"1223.67059"	"-0.31"	"-0.00019"	"5/56"	"5"	"56"	"1900621.68756104"	"HCD"	"MS2"	"0"	"177.5"	"100.000"	"37.2056"	"10165"	"10165"	"10147"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.8"	""	"224.0"	""	"250.6"	""	"275.1"	""	"344.2"	"349.7"	""	"736"	"20"	"35.000"	"28.000"	"0.337946395505957"	"26"	"0.00307"	"0.03319"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEATITEFA"	"[K].lEATITEFA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"612.33911"	"1223.67095"	"1223.67209"	"-0.93"	"-0.00057"	"6/76"	"6"	"76"	"987050.231018066"	"HCD"	"MS2"	"3.630159"	"15.7"	"100.000"	"113.6231"	"40972"	"40972"	"40953"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"21.9"	""	"28.2"	""	"26.2"	""	"26.4"	"28.1"	""	"735"	"44"	"35.000"	"28.000"	"0.00160789373645658"	"17"	"0.0001991"	"0.005612"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEATITEFA"	"[K].lEATITEFA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"612.33923"	"1223.67119"	"1223.67209"	"-0.73"	"-0.00045"	"7/76"	"7"	"76"	"706370.550048828"	"HCD"	"MS2"	"2.498991"	"11.9"	"100.000"	"113.6926"	"41014"	"41014"	"40991"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"15.2"	""	"25.3"	""	"22.6"	""	"19.5"	"19.5"	""	"735"	"47"	"35.000"	"28.000"	"0.000681172871604944"	"24"	"0.0001686"	"0.001249"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETTGEK"	"[R].tETTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"612.34705"	"1223.68682"	"1223.68835"	"-1.26"	"-0.00077"	"6/58"	"6"	"58"	"547884.864318848"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"23.9121"	"4829"	"4829"	"4802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.6"	""	"67.0"	""	"67.8"	""	"79.5"	""	"92.8"	"97.8"	""	"622"	"21"	"34.000"	"27.000"	"0.255129330286573"	"19"	"0.004234"	"0.04847"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETTGEK"	"[R].tETTGEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"612.34753"	"1223.68779"	"1223.68835"	"-0.46"	"-0.00028"	"10/58"	"10"	"58"	"490527.297668457"	"HCD"	"MS2"	"0"	"50.8"	"100.000"	"24.0139"	"4833"	"4833"	"4807"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.9"	""	"68.7"	""	"69.1"	""	"84.0"	"0.1"	"92.5"	"87.7"	""	"604"	"26"	"34.000"	"27.000"	"0.0711224883736595"	"25"	"0.0008247"	"0.007571"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSEK"	"[R].dLSSSEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"612.34753"	"1223.68779"	"1223.68835"	"-0.46"	"-0.00028"	"6/58"	"6"	"58"	"1449741.33685303"	"HCD"	"MS2"	"33.2851"	"124.6"	"100.000"	"33.9739"	"8858"	"8858"	"8844"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.5"	""	"118.4"	""	"134.6"	""	"216.9"	""	"272.8"	"279.8"	""	"604"	"36"	"34.000"	"27.000"	"0.00772692937845505"	""	"0.001217"	"0.009434"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSEK"	"[R].dLSSSEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"612.34760"	"1223.68791"	"1223.68835"	"-0.36"	"-0.00022"	"12/58"	"12"	"58"	"1747290.15863037"	"HCD"	"MS2"	"35.25546"	"153.3"	"100.000"	"34.0409"	"8849"	"8849"	"8831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.0"	""	"151.9"	""	"158.2"	""	"290.5"	""	"331.5"	"323.6"	""	"604"	"24"	"34.000"	"27.000"	"0.122745885407894"	"27"	"0.002189"	"0.02019"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIHLNLDR"	"[K].nIHLNLDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"408.57303"	"1223.70453"	"1223.70579"	"-1.02"	"-0.00042"	"5/70"	"5"	"70"	"3849416.75494385"	"HCD"	"MS2"	"8.997228"	"93.1"	"100.000"	"46.1784"	"13773"	"13773"	"13745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.4"	""	"75.9"	""	"80.9"	""	"195.5"	""	"217.7"	"227.9"	""	"538"	"13"	"34.000"	"27.000"	"1.2875149483479"	"21"	"0.002628"	"0.02776"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIHLNLDR"	"[K].nIHLNLDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"408.57327"	"1223.70526"	"1223.70579"	"-0.43"	"-0.00017"	"6/70"	"6"	"70"	"3769484.19152832"	"HCD"	"MS2"	"3.810742"	"86.3"	"100.000"	"45.8644"	"13679"	"13679"	"13653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.1"	""	"71.3"	""	"79.7"	""	"184.2"	""	"202.2"	"205.1"	""	"515"	"15"	"34.000"	"27.000"	"0.740930091794434"	"19"	"0.001615"	"0.01472"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITISDCGQL"	"[K].iTISDcGQL.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.81146"	"1224.61565"	"1224.61656"	"-0.75"	"-0.00046"	"6/70"	"6"	"70"	"274081.803466797"	"HCD"	"MS2"	"30.65639"	"10.0"	"100.000"	"113.7690"	"41045"	"41045"	"41023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"11.1"	""	"14.2"	""	"18.0"	""	"14.5"	"21.2"	""	"515"	"39"	"34.000"	"27.000"	"0.00289585780796483"	"15"	"0.0001991"	"0.00447"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITISDCGQL"	"[K].iTISDcGQL.[-]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.81165"	"1224.61601"	"1224.61656"	"-0.45"	"-0.00027"	"7/70"	"7"	"70"	"350170.12322998"	"HCD"	"MS2"	"28.69979"	"11.7"	"100.000"	"113.7067"	"41006"	"41006"	"40985"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"16.9"	""	"16.6"	""	"20.9"	""	"19.7"	"18.0"	""	"513"	"36"	"34.000"	"27.000"	"0.00654767884132609"	"15"	"0.0005778"	"0.007099"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSMLGTK"	"[R].gGSmLGTk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"612.85449"	"1224.70171"	"1224.70223"	"-0.43"	"-0.00026"	"7/64"	"7"	"64"	"1481438.56176758"	"HCD"	"MS2"	"0"	"93.5"	"100.000"	"31.2065"	"7700"	"7700"	"7681"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.0"	""	"106.4"	""	"126.3"	""	"232.4"	""	"152.2"	"162.9"	""	"488"	"24"	"33.000"	"26.000"	"0.0964694552966231"	"20"	"0.004819"	"0.05764"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSMLGTK"	"[R].gGSmLGTk.[R]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"612.85461"	"1224.70195"	"1224.70223"	"-0.23"	"-0.00014"	"7/64"	"7"	"64"	"1234806.56243896"	"HCD"	"MS2"	"0"	"85.3"	"100.000"	"31.0165"	"7665"	"7665"	"7649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.1"	""	"90.2"	""	"114.1"	""	"201.7"	""	"159.7"	"148.7"	""	"491"	"27"	"33.000"	"26.000"	"0.0502402158315908"	"21"	"0.00504"	"0.06383"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQHPDAK"	"[K].aQHPDAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"612.85748"	"1224.70769"	"1224.71009"	"-1.96"	"-0.00120"	"6/58"	"6"	"58"	"371885.479736328"	"HCD"	"MS2"	"0"	"26.7"	"100.000"	"19.6758"	"3159"	"3159"	"3151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"29.6"	""	"38.1"	""	"40.1"	""	"55.9"	"42.9"	""	"415"	"32"	"33.000"	"26.000"	"0.0131831168359237"	""	"0.001951"	"0.01676"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQHPDAK"	"[K].aQHPDAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.85822"	"1224.70915"	"1224.71009"	"-0.77"	"-0.00047"	"9/58"	"9"	"58"	"340299.418945313"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"19.6526"	"3189"	"3189"	"3180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"31.4"	""	"32.4"	""	"39.4"	""	"48.3"	"42.2"	""	"406"	"22"	"33.000"	"26.000"	"0.12345140525958"	"14"	"0.004234"	"0.04971"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"612.86609"	"1224.72490"	"1224.72619"	"-1.05"	"-0.00064"	"8/90"	"8"	"90"	"5229580.1762085"	"HCD"	"MS2"	"0"	"210.0"	"100.000"	"41.3506"	"11840"	"11840"	"11814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.1"	""	"238.0"	""	"257.8"	""	"364.6"	"0.1"	"428.0"	"420.0"	""	"362"	"46"	"32.000"	"25.000"	"0.000412741915032076"	"18"	"0"	"2.625E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"612.86615"	"1224.72502"	"1224.72619"	"-0.95"	"-0.00058"	"8/90"	"8"	"90"	"14790869.7258301"	"HCD"	"MS2"	"0"	"265.5"	"50.951"	"41.6353"	"11956"	"11956"	"11939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"338.0"	""	"286.1"	""	"324.0"	""	"486.9"	""	"530.3"	"560.8"	""	"362"	"46"	"32.000"	"25.000"	"0.000492808936762103"	"18"	"0"	"4.217E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"612.86621"	"1224.72515"	"1224.72619"	"-0.85"	"-0.00052"	"8/90"	"8"	"90"	"15316628.2872314"	"HCD"	"MS2"	"0"	"304.3"	"58.814"	"41.7565"	"11971"	"11971"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"361.2"	""	"334.7"	""	"386.3"	""	"549.2"	""	"624.1"	"641.0"	""	"360"	"47"	"32.000"	"25.000"	"0.000382184003160039"	"19"	"0"	"1.528E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAGPASVPLR"	"[K].qAGPASVPLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"612.86633"	"1224.72539"	"1224.72619"	"-0.65"	"-0.00040"	"8/90"	"8"	"90"	"4048926.45074463"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"41.4669"	"11853"	"11853"	"11834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.8"	""	"196.6"	""	"220.8"	""	"305.9"	""	"334.7"	"348.7"	""	"361"	"46"	"32.000"	"25.000"	"0.000432989341883018"	"19"	"0"	"2.742E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNLGVGAYR"	"[K].mNLGVGAYR.[D]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.33118"	"1225.65508"	"1225.65606"	"-0.80"	"-0.00049"	"8/80"	"8"	"80"	"2417349.74841309"	"HCD"	"MS2"	"21.16365"	"135.4"	"100.000"	"43.7964"	"12838"	"12838"	"12810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.0"	""	"159.6"	""	"189.5"	""	"236.5"	""	"254.2"	"277.4"	""	"492"	"16"	"33.000"	"26.000"	"0.648537520913044"	"13"	"0.0001991"	"0.002139"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNLGVGAYR"	"[K].mNLGVGAYR.[D]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.33142"	"1225.65557"	"1225.65606"	"-0.40"	"-0.00025"	"12/80"	"12"	"80"	"2937510.4052124"	"HCD"	"MS2"	"36.67162"	"172.6"	"100.000"	"43.9315"	"12857"	"12857"	"12835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.0"	""	"216.2"	"3.5"	"248.7"	""	"276.0"	""	"335.5"	"335.6"	""	"492"	"12"	"33.000"	"26.000"	"1.38974495803827"	"13"	"0.0001991"	"0.002353"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYTFEPR"	"[R].aLYTFEPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"613.34119"	"1225.67510"	"1225.67784"	"-2.24"	"-0.00137"	"6/60"	"6"	"60"	"850311.660400391"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"77.4709"	"26494"	"26494"	"26479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"56.7"	""	"56.2"	""	"71.6"	"1.0"	"75.8"	"80.8"	""	"499"	"20"	"33.000"	"26.000"	"0.226501222279457"	"26"	"0.001999"	"0.0175"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYTFEPR"	"[R].aLYTFEPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"613.34180"	"1225.67632"	"1225.67784"	"-1.24"	"-0.00076"	"5/60"	"5"	"60"	"3009176.96911621"	"HCD"	"MS2"	"8.450269"	"125.0"	"100.000"	"77.7619"	"26583"	"26583"	"26565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.0"	""	"158.1"	""	"188.7"	""	"198.3"	""	"217.2"	"249.5"	""	"491"	"28"	"33.000"	"26.000"	"0.0350793466814476"	"21"	"0.0001991"	"0.004272"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYTFEPR"	"[R].aLYTFEPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"613.34222"	"1225.67717"	"1225.67784"	"-0.54"	"-0.00033"	"5/60"	"5"	"60"	"2906772.91339111"	"HCD"	"MS2"	"14.25366"	"129.8"	"100.000"	"77.7713"	"26614"	"26614"	"26596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.6"	""	"159.2"	""	"196.7"	""	"213.8"	""	"224.1"	"248.6"	""	"502"	"31"	"33.000"	"27.000"	"0.0213144299234115"	"19"	"0.0001991"	"0.002536"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYTFEPR"	"[R].aLYTFEPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"613.34253"	"1225.67778"	"1225.67784"	"-0.05"	"-0.00003"	"5/60"	"5"	"60"	"1173084.08270264"	"HCD"	"MS2"	"32.71998"	"54.1"	"100.000"	"77.4429"	"26454"	"26454"	"26439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.6"	""	"72.6"	""	"89.9"	""	"93.3"	""	"94.5"	"96.9"	""	"495"	"21"	"33.000"	"26.000"	"0.217558072915644"	""	"0.001596"	"0.01296"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMDSVK"	"[K].tSMDSVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"613.34528"	"1225.68328"	"1225.68624"	"-2.42"	"-0.00148"	"6/56"	"6"	"56"	"1886350.98632813"	"HCD"	"MS2"	"0"	"166.1"	"100.000"	"39.5574"	"11083"	"11083"	"11063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.5"	""	"175.2"	""	"194.7"	""	"241.8"	"0.3"	"406.7"	"392.3"	""	"466"	"33"	"33.000"	"26.000"	"0.0125128408554269"	"22"	"0.001999"	"0.01762"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMDSVK"	"[K].tSMDSVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"613.34601"	"1225.68474"	"1225.68624"	"-1.23"	"-0.00075"	"12/56"	"12"	"56"	"1578101.0713501"	"HCD"	"MS2"	"9.147106"	"151.9"	"100.000"	"39.8758"	"11211"	"11211"	"11194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.9"	""	"186.9"	""	"213.3"	""	"184.3"	""	"329.5"	"332.1"	""	"458"	"24"	"33.000"	"26.000"	"0.0837212072794056"	""	"0.002588"	"0.02709"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMDSVK"	"[K].tSMDSVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"613.34619"	"1225.68511"	"1225.68624"	"-0.93"	"-0.00057"	"6/56"	"6"	"56"	"1535416.50836182"	"HCD"	"MS2"	"42.51996"	"145.2"	"100.000"	"39.9568"	"11278"	"11278"	"11254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"257.3"	""	"215.4"	""	"256.5"	""	"133.6"	""	"232.9"	"279.5"	""	"458"	"15"	"33.000"	"26.000"	"0.67272177029919"	"24"	"0.00455"	"0.05308"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSMDSVK"	"[K].tSMDSVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"Q9JHJ1"	"Receptor activity-modifying protein 2 OS=Rattus norvegicus OX=10116 GN=Ramp2 PE=2 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"613.34631"	"1225.68535"	"1225.68624"	"-0.73"	"-0.00045"	"12/56"	"12"	"56"	"2000921.06317139"	"HCD"	"MS2"	"0"	"177.2"	"100.000"	"39.6310"	"11147"	"11147"	"11128"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.3"	""	"184.9"	""	"220.3"	""	"249.4"	""	"445.3"	"425.7"	""	"458"	"38"	"33.000"	"26.000"	"0.00359613082192383"	"23"	"0.001453"	"0.01188"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].QITINDLPVGR.[S]"	""	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"613.34857"	"1225.68987"	"1225.68991"	"-0.04"	"-0.00002"	"5/106"	"5"	"106"	"672534.79095459"	"HCD"	"MS2"	"34.69981"	"17.6"	"100.000"	"111.2451"	"40013"	"40013"	"39991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"23.9"	""	"23.2"	""	"28.7"	"1.4"	"27.9"	"35.5"	"NoQuanLabels"	"456"	"29"	"33.000"	"26.000"	"0.030056253639086"	"17"	"0.002673"	"0.02818"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].QITLNDLPVGR.[S]"	""	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"613.34857"	"1225.68987"	"1225.68991"	"-0.04"	"-0.00002"	"5/106"	"5"	"106"	"672534.79095459"	"HCD"	"MS2"	"34.69981"	"17.6"	"100.000"	"111.2451"	"40013"	"40013"	"39991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"23.9"	""	"23.2"	""	"28.7"	"1.4"	"27.9"	"35.5"	"NoQuanLabels"	"456"	"29"	"33.000"	"26.000"	"0.030056253639086"	"17"	"0.002673"	"0.02818"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVVPPSNR"	"[R].lDVVPPSNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"613.35590"	"1225.70452"	"1225.71020"	"-4.64"	"-0.00284"	"7/76"	"7"	"76"	"728523.904785156"	"HCD"	"MS2"	"37.61419"	"37.8"	"100.000"	"56.2776"	"17869"	"17869"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.2"	""	"50.4"	""	"48.2"	""	"60.3"	"2.2"	"74.7"	"74.6"	""	"447"	"11"	"33.000"	"26.000"	"1.62284681486757"	"17"	"0.002525"	"0.02505"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVVPPSNR"	"[R].lDVVPPSNR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"Q9R066"	"Coxsackievirus and adenovirus receptor homolog OS=Rattus norvegicus OX=10116 GN=Cxadr PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"613.35834"	"1225.70940"	"1225.71020"	"-0.66"	"-0.00040"	"6/76"	"6"	"76"	"499139.106994629"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"56.0080"	"17794"	"17794"	"17772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.0"	""	"43.9"	""	"41.8"	""	"47.2"	"1.4"	"61.5"	"60.0"	""	"428"	"10"	"33.000"	"26.000"	"2.07689132990535"	"18"	"0.007522"	"0.09589"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVYAAEK"	"[K].sVYAAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"613.36298"	"1225.71868"	"1225.71926"	"-0.48"	"-0.00029"	"10/58"	"10"	"58"	"1470776.32092285"	"HCD"	"MS2"	"45.67698"	"147.6"	"100.000"	"39.9778"	"11286"	"11286"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.9"	""	"237.0"	""	"270.7"	""	"144.3"	""	"220.6"	"257.4"	""	"359"	"25"	"32.000"	"25.000"	"0.0534643699082539"	"24"	"0.001348"	"0.01111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVYAAEK"	"[K].sVYAAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"613.36298"	"1225.71868"	"1225.71926"	"-0.48"	"-0.00029"	"6/58"	"6"	"58"	"1246855.19976807"	"HCD"	"MS2"	"31.67739"	"114.6"	"100.000"	"40.1515"	"11323"	"11323"	"11299"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.7"	""	"202.1"	""	"196.8"	""	"112.3"	"0.0"	"158.1"	"184.2"	""	"359"	"22"	"32.000"	"25.000"	"0.107662498187864"	"18"	"0.001453"	"0.01184"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGPEQLLR"	"[R].aLGPEQLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"613.37653"	"1225.74578"	"1225.74659"	"-0.66"	"-0.00041"	"6/70"	"6"	"70"	"605065.950256348"	"HCD"	"MS2"	"35.10162"	"32.8"	"100.000"	"84.2858"	"29255"	"29255"	"29235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.8"	""	"51.6"	""	"46.8"	""	"52.7"	""	"62.8"	"55.6"	""	"255"	"30"	"31.000"	"24.000"	"0.0120090923556662"	"21"	"0.001615"	"0.01335"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGPEQLLR"	"[R].aLGPEQLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"613.37671"	"1225.74614"	"1225.74659"	"-0.36"	"-0.00022"	"6/70"	"6"	"70"	"561062.938964844"	"HCD"	"MS2"	"9.517284"	"29.6"	"100.000"	"84.5629"	"29339"	"29339"	"29318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"37.7"	""	"43.0"	""	"48.1"	""	"54.3"	"51.3"	""	"217"	"31"	"30.000"	"23.000"	"0.00804321611811496"	"17"	"0.00212"	"0.01914"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGPEQLLR"	"[R].aLGPEQLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"613.37677"	"1225.74626"	"1225.74659"	"-0.26"	"-0.00016"	"6/70"	"6"	"70"	"530471.709411621"	"HCD"	"MS2"	"34.26102"	"28.2"	"100.000"	"84.2607"	"29217"	"29217"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.3"	""	"37.6"	""	"47.3"	""	"44.8"	"0.3"	"49.0"	"50.0"	""	"217"	"33"	"30.000"	"23.000"	"0.00570728734033916"	"20"	"0.001348"	"0.01133"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGPEQLLR"	"[R].aLGPEQLLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"613.37720"	"1225.74712"	"1225.74659"	"0.43"	"0.00027"	"5/70"	"5"	"70"	"519012.326782227"	"HCD"	"MS2"	"11.29891"	"28.5"	"100.000"	"84.5946"	"29380"	"29380"	"29367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.8"	""	"40.7"	""	"43.6"	""	"46.8"	""	"43.6"	"55.2"	""	"217"	"22"	"30.000"	"23.000"	"0.0742044137300351"	"18"	"0.002035"	"0.01832"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAHIK"	"[K].dIAAHIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.26013"	"1225.76584"	"1225.76688"	"-0.85"	"-0.00035"	"7/48"	"7"	"48"	"1793514.56585693"	"HCD"	"MS2"	"38.82732"	"104.0"	"100.000"	"43.0905"	"12549"	"12549"	"12523"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.1"	""	"133.9"	""	"137.7"	""	"181.4"	"0.0"	"194.8"	"192.7"	""	"160"	"14"	"29.000"	"22.000"	"0.31411594831968"	"13"	"0.00307"	"0.03427"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIAAHIK"	"[K].dIAAHIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"P63170"	"Dynein light chain 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.26068"	"1225.76749"	"1225.76688"	"0.50"	"0.00020"	"7/48"	"7"	"48"	"1755575.89685059"	"HCD"	"MS2"	"16.54017"	"98.2"	"100.000"	"43.2401"	"12576"	"12576"	"12546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.7"	""	"126.4"	""	"138.6"	""	"169.9"	"0.3"	"180.3"	"175.8"	""	"159"	"16"	"29.000"	"22.000"	"0.187226418069733"	"14"	"0.00212"	"0.01924"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDLMAYDR"	"[R].gGDLMAYDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.80536"	"1226.60344"	"1226.60369"	"-0.20"	"-0.00012"	"8/74"	"8"	"74"	"1441882.2442627"	"HCD"	"MS2"	"12.4431"	"102.5"	"100.000"	"52.4131"	"16298"	"16298"	"16275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.7"	""	"140.6"	""	"117.2"	""	"138.0"	"0.4"	"189.6"	"228.0"	""	"422"	"18"	"33.000"	"26.000"	"0.298732487570944"	"14"	"9.9E-05"	"0.0004845"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDNLGYR"	"[R].mLDNLGYR.[T]"	"N-Term(TMT6plex); M1(Oxidation)"	"2"	"2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4;Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4; Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.82257"	"1226.63786"	"1226.64007"	"-1.80"	"-0.00110"	"6/64"	"6"	"64"	"1533667.0791626"	"HCD"	"MS2"	"0"	"72.4"	"100.000"	"53.2947"	"16692"	"16692"	"16671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.5"	""	"99.9"	""	"85.8"	""	"164.8"	""	"132.5"	"128.0"	""	"468"	"17"	"33.000"	"26.000"	"0.488895294619845"	"14"	"0.004713"	"0.05542"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLDNLGYR"	"[R].mLDNLGYR.[T]"	"N-Term(TMT6plex); M1(Oxidation)"	"2"	"2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4;Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q05764; Q63028"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4; Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"613.82263"	"1226.63799"	"1226.64007"	"-1.70"	"-0.00104"	"6/64"	"6"	"64"	"1532860.3168335"	"HCD"	"MS2"	"9.277943"	"73.9"	"100.000"	"52.9196"	"16539"	"16539"	"16514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.9"	""	"83.5"	""	"88.9"	""	"197.6"	""	"127.2"	"113.9"	""	"468"	"19"	"33.000"	"26.000"	"0.263764204745069"	"18"	"0.006305"	"0.07867"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIASTGMDR"	"[K].fIASTGMDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"Q9JMJ4"	"Pre-mRNA-processing factor 19 OS=Rattus norvegicus OX=10116 GN=Prpf19 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"613.82330"	"1226.63933"	"1226.64007"	"-0.61"	"-0.00037"	"8/72"	"8"	"72"	"1021512.47235107"	"HCD"	"MS2"	"9.525971"	"74.6"	"100.000"	"58.1508"	"18664"	"18664"	"18638"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.6"	""	"95.7"	""	"95.7"	""	"95.8"	""	"177.8"	"145.7"	""	"468"	"29"	"33.000"	"26.000"	"0.0268667947430271"	"18"	"0"	"0.0002627"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQSITER"	"[R].tYQSITER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"613.83148"	"1226.65569"	"1226.65783"	"-1.75"	"-0.00107"	"7/78"	"7"	"78"	"710702.813110352"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"36.6834"	"9915"	"9915"	"9887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.4"	""	"75.3"	""	"81.6"	""	"116.6"	""	"123.2"	"121.0"	""	"526"	"16"	"34.000"	"27.000"	"0.669816356429867"	"17"	"0.00212"	"0.01945"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQSITER"	"[R].tYQSITER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"613.83173"	"1226.65618"	"1226.65783"	"-1.35"	"-0.00083"	"6/78"	"6"	"78"	"723868.265441895"	"HCD"	"MS2"	"32.29962"	"62.1"	"100.000"	"36.5782"	"9910"	"9910"	"9883"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.0"	""	"80.0"	""	"82.9"	""	"113.3"	""	"113.6"	"115.9"	""	"544"	"24"	"34.000"	"27.000"	"0.116565197548104"	"21"	"0.001615"	"0.01344"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDLPTGPR"	"[K].eLDLPTGPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"613.85028"	"1226.69328"	"1226.69422"	"-0.76"	"-0.00047"	"7/74"	"7"	"74"	"352651.668029785"	"HCD"	"MS2"	"37.10787"	"24.9"	"100.000"	"70.8077"	"23799"	"23799"	"23782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"33.8"	""	"29.8"	""	"41.4"	""	"51.1"	"44.5"	""	"563"	"20"	"34.000"	"27.000"	"0.277637675205186"	"17"	"0.001049"	"0.00883"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDLPTGPR"	"[K].eLDLPTGPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"613.85071"	"1226.69414"	"1226.69422"	"-0.06"	"-0.00004"	"6/74"	"6"	"74"	"334470.895446777"	"HCD"	"MS2"	"27.87447"	"24.8"	"100.000"	"71.1306"	"23929"	"23929"	"23909"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"36.0"	""	"33.8"	""	"31.3"	"0.7"	"46.2"	"45.1"	""	"538"	"15"	"34.000"	"27.000"	"0.888694065389032"	"16"	"0.002035"	"0.01792"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLSSGDLLR"	"[K].hLSSGDLLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"409.57272"	"1226.70362"	"1226.70545"	"-1.50"	"-0.00061"	"7/70"	"7"	"70"	"2498085.96820068"	"HCD"	"MS2"	"45.57533"	"81.0"	"100.000"	"42.4351"	"12247"	"12247"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.3"	""	"91.7"	""	"89.1"	""	"152.1"	""	"176.2"	"162.6"	""	"466"	"24"	"33.000"	"26.000"	"0.0910659287196297"	"14"	"9.9E-05"	"0.0008157"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLSSGDLLR"	"[K].hLSSGDLLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"409.57291"	"1226.70417"	"1226.70545"	"-1.05"	"-0.00043"	"8/70"	"8"	"70"	"5094276.87408447"	"HCD"	"MS2"	"31.85074"	"122.9"	"100.000"	"41.9657"	"12090"	"12090"	"12065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.7"	""	"151.3"	""	"160.1"	""	"198.1"	""	"210.1"	"292.0"	""	"466"	"41"	"33.000"	"26.000"	"0.00175936489046046"	"19"	"0"	"7.005E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLSSGDLLR"	"[K].hLSSGDLLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"409.57312"	"1226.70481"	"1226.70545"	"-0.53"	"-0.00021"	"7/70"	"7"	"70"	"4110958.24572754"	"HCD"	"MS2"	"39.41864"	"97.7"	"100.000"	"42.2464"	"12204"	"12204"	"12188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.0"	""	"102.2"	""	"126.8"	""	"159.9"	""	"204.8"	"202.9"	""	"453"	"36"	"33.000"	"26.000"	"0.00609632633089446"	"20"	"0"	"0.0003241"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLSSGDLLR"	"[K].hLSSGDLLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"409.57312"	"1226.70481"	"1226.70545"	"-0.53"	"-0.00021"	"8/70"	"8"	"70"	"5535004.4440918"	"HCD"	"MS2"	"29.24778"	"128.9"	"100.000"	"42.1085"	"12114"	"12114"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.0"	""	"159.4"	""	"160.0"	""	"200.0"	""	"232.9"	"304.5"	""	"453"	"42"	"33.000"	"26.000"	"0.00134917475509321"	"20"	"0"	"8.882E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGEAQVK"	"[K].hGEAQVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"613.86664"	"1226.72600"	"1226.72574"	"0.21"	"0.00013"	"6/52"	"6"	"52"	"2579030.84588623"	"HCD"	"MS2"	"0"	"192.5"	"100.000"	"20.2072"	"3397"	"3397"	"3372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"300.9"	"3.5"	"203.0"	""	"253.7"	""	"335.5"	""	"366.1"	"363.2"	""	"342"	"31"	"32.000"	"25.000"	"0.0134584830037862"	"17"	"0.001103"	"0.008934"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGEAQVK"	"[K].hGEAQVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"613.86700"	"1226.72673"	"1226.72574"	"0.81"	"0.00050"	"12/52"	"12"	"52"	"731456.794128418"	"HCD"	"MS2"	"100"	"67.1"	"100.000"	"20.1875"	"3349"	"3349"	"3335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.8"	""	"83.9"	""	"88.1"	""	"121.8"	""	"115.7"	"132.3"	""	"323"	"22"	"32.000"	"25.000"	"0.095537203919339"	"19"	"0.0001991"	"0.002622"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPELLQR"	"[K].eLPELLQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"613.86835"	"1226.72942"	"1226.73060"	"-0.97"	"-0.00059"	"5/64"	"5"	"64"	"413663.384094238"	"HCD"	"MS2"	"58.73698"	"23.0"	"100.000"	"91.2406"	"32020"	"32020"	"31994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"33.9"	""	"27.4"	""	"40.3"	""	"42.6"	"37.2"	""	"329"	"28"	"32.000"	"25.000"	"0.0262522119720443"	"18"	"0.00394"	"0.04297"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPELLQR"	"[K].eLPELLQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"613.86865"	"1226.73003"	"1226.73060"	"-0.47"	"-0.00029"	"5/64"	"5"	"64"	"1004847.73822021"	"HCD"	"MS2"	"25.11169"	"40.1"	"100.000"	"91.8008"	"32283"	"32283"	"32267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.8"	""	"48.5"	""	"58.3"	""	"63.8"	""	"75.7"	"76.8"	""	"287"	"29"	"31.000"	"24.000"	"0.0186145225386198"	"17"	"0.0001686"	"0.001673"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPELLQR"	"[K].eLPELLQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"613.86877"	"1226.73027"	"1226.73060"	"-0.27"	"-0.00017"	"5/64"	"5"	"64"	"1034151.08880615"	"HCD"	"MS2"	"22.85023"	"43.0"	"100.000"	"91.8638"	"32273"	"32273"	"32256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.8"	""	"54.4"	""	"58.1"	""	"70.8"	"0.4"	"80.8"	"82.3"	""	"287"	"32"	"31.000"	"24.000"	"0.00862684313288504"	"20"	"0.0001686"	"0.001217"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPELLQR"	"[K].eLPELLQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"613.86896"	"1226.73064"	"1226.73060"	"0.03"	"0.00002"	"6/64"	"6"	"64"	"2996256.32208252"	"HCD"	"MS2"	"2.460265"	"123.1"	"100.000"	"91.5570"	"32149"	"32149"	"32132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.0"	""	"137.5"	""	"161.4"	""	"221.6"	""	"219.6"	"237.2"	""	"287"	"33"	"31.000"	"24.000"	"0.00701216135656966"	""	"0.0001686"	"0.001645"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPELLQR"	"[K].eLPELLQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"613.86908"	"1226.73088"	"1226.73060"	"0.23"	"0.00014"	"6/64"	"6"	"64"	"2856497.2756958"	"HCD"	"MS2"	"0.599088"	"111.6"	"100.000"	"91.4847"	"32155"	"32155"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.7"	""	"142.9"	""	"151.0"	""	"188.0"	""	"206.9"	"202.0"	""	"287"	"37"	"31.000"	"24.000"	"0.00280447711903769"	"23"	"0.0001686"	"0.001241"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPELLQR"	"[K].eLPELLQR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"613.86914"	"1226.73100"	"1226.73060"	"0.33"	"0.00020"	"5/64"	"5"	"64"	"619372.036804199"	"HCD"	"MS2"	"50.88963"	"33.4"	"100.000"	"91.1983"	"32040"	"32040"	"32019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"46.1"	""	"45.8"	""	"63.0"	""	"54.9"	"51.5"	""	"287"	"30"	"31.000"	"24.000"	"0.0128189336915728"	"20"	"9.9E-05"	"0.0009599"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEPPAK"	"[R].qVEPPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"613.87817"	"1226.74907"	"1226.75089"	"-1.49"	"-0.00091"	"5/60"	"5"	"60"	"2716459.69549561"	"HCD"	"MS2"	"15.22464"	"171.5"	"100.000"	"38.8612"	"10838"	"10838"	"10814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.7"	""	"191.1"	""	"211.2"	""	"301.3"	""	"359.0"	"358.7"	""	"245"	"16"	"30.000"	"23.000"	"0.28322793679651"	""	"0.002588"	"0.02631"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEPPAK"	"[R].qVEPPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"613.87921"	"1226.75115"	"1226.75089"	"0.21"	"0.00013"	"5/60"	"5"	"60"	"1200419.49273682"	"HCD"	"MS2"	"37.50168"	"96.4"	"100.000"	"38.4062"	"10652"	"10652"	"10628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.3"	""	"118.8"	""	"116.5"	""	"159.3"	"1.7"	"192.2"	"197.5"	""	"236"	"18"	"30.000"	"23.000"	"0.174937134047223"	""	"0.004158"	"0.04495"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEPPAK"	"[R].qVEPPAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"613.87952"	"1226.75176"	"1226.75089"	"0.70"	"0.00043"	"5/60"	"5"	"60"	"1325831.99493408"	"HCD"	"MS2"	"38.97243"	"103.1"	"100.000"	"38.5258"	"10665"	"10665"	"10642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.0"	""	"136.2"	""	"134.7"	""	"155.2"	""	"200.7"	"204.7"	""	"236"	"22"	"30.000"	"23.000"	"0.0698042728327059"	""	"0.005266"	"0.06657"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].EVLPELGIk.[K]"	"K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"613.88098"	"1226.75469"	"1226.75576"	"-0.87"	"-0.00053"	"6/72"	"6"	"72"	"195109.632507324"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"95.1204"	"33589"	"33589"	"33562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.3"	""	"16.5"	""	"16.6"	""	"18.2"	"1.2"	"20.1"	"20.7"	""	"252"	"43"	"31.000"	"24.000"	"0.000697221137611828"	""	"0.001348"	"0.01078"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLPELGIK"	"[K].EVLPELGIk.[K]"	"K9(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"613.88135"	"1226.75542"	"1226.75576"	"-0.27"	"-0.00017"	"6/72"	"6"	"72"	"153980.717102051"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"95.1869"	"33649"	"33649"	"33623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"12.4"	""	"17.8"	""	"16.8"	""	"19.6"	"18.1"	""	"238"	"49"	"30.000"	"23.000"	"0.000152597339336066"	""	"0.000264"	"0.006153"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDMFSR"	"[K].dVEDMFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"614.29718"	"1227.58708"	"1227.58770"	"-0.51"	"-0.00031"	"6/68"	"6"	"68"	"712320.903503418"	"HCD"	"MS2"	"7.000589"	"42.3"	"100.000"	"79.4814"	"27283"	"27283"	"27259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.1"	""	"39.7"	""	"35.8"	""	"63.4"	""	"94.6"	"93.3"	""	"289"	"36"	"31.000"	"24.000"	"0.00326488468796931"	"20"	"9.9E-05"	"0.0006324"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVEDMFSR"	"[K].dVEDMFSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"614.29803"	"1227.58879"	"1227.58770"	"0.89"	"0.00054"	"5/68"	"5"	"68"	"686396.884460449"	"HCD"	"MS2"	"13.42774"	"40.9"	"100.000"	"79.5571"	"27341"	"27341"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.6"	""	"48.2"	""	"33.5"	""	"54.7"	"0.3"	"92.5"	"91.9"	""	"308"	"31"	"31.000"	"24.000"	"0.0125464459739209"	"19"	"9.9E-05"	"0.0009162"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDFSDYR"	"[K].vPDFSDYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"614.31360"	"1227.61992"	"1227.62072"	"-0.65"	"-0.00040"	"11/62"	"11"	"62"	"1238062.81536865"	"HCD"	"MS2"	"12.97827"	"54.1"	"100.000"	"81.7906"	"28248"	"28248"	"28232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.9"	""	"70.8"	""	"75.4"	""	"77.5"	""	"116.9"	"111.5"	""	"421"	"24"	"33.000"	"26.000"	"0.0780282919352322"	"15"	"0.008893"	"0.1146"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDFSDYR"	"[K].vPDFSDYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"614.31378"	"1227.62029"	"1227.62072"	"-0.35"	"-0.00022"	"8/62"	"8"	"62"	"1333710.52386475"	"HCD"	"MS2"	"11.12608"	"54.8"	"100.000"	"81.7240"	"28193"	"28193"	"28171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.8"	""	"64.4"	""	"87.6"	""	"76.6"	""	"109.5"	"115.8"	""	"420"	"18"	"33.000"	"26.000"	"0.336681532044908"	"18"	"0.004234"	"0.05004"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPDFSDYR"	"[K].vPDFSDYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.31415"	"1227.62102"	"1227.62072"	"0.24"	"0.00015"	"10/62"	"10"	"62"	"1910013.48352051"	"HCD"	"MS2"	"13.03254"	"61.6"	"100.000"	"81.4953"	"28128"	"28128"	"28109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.1"	""	"75.4"	""	"79.6"	""	"95.5"	""	"130.6"	"128.0"	""	"412"	"12"	"33.000"	"26.000"	"1.37996229539804"	"13"	"0.009751"	"0.1298"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"614.31464"	"1227.62200"	"1227.62409"	"-1.71"	"-0.00105"	"5/68"	"5"	"68"	"3528043.85266113"	"HCD"	"MS2"	"9.391809"	"174.1"	"100.000"	"43.6629"	"12783"	"12783"	"12762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.2"	""	"200.8"	""	"215.7"	""	"414.3"	""	"332.6"	"298.1"	""	"415"	"20"	"33.000"	"26.000"	"0.204652993268476"	"21"	"0.004213"	"0.04582"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"614.31488"	"1227.62248"	"1227.62409"	"-1.31"	"-0.00080"	"5/68"	"5"	"68"	"4757138.95031738"	"HCD"	"MS2"	"12.82414"	"233.8"	"100.000"	"43.7685"	"12791"	"12791"	"12777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.2"	""	"267.6"	""	"298.3"	""	"566.6"	""	"457.0"	"399.6"	""	"418"	"23"	"33.000"	"26.000"	"0.0973074935462983"	"22"	"0.004114"	"0.04455"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"614.31519"	"1227.62309"	"1227.62409"	"-0.81"	"-0.00050"	"5/68"	"5"	"68"	"800499.82232666"	"HCD"	"MS2"	"38.44616"	"63.1"	"100.000"	"55.4910"	"17554"	"17554"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.7"	""	"76.8"	""	"82.1"	""	"111.8"	"3.1"	"129.7"	"113.5"	""	"421"	"17"	"33.000"	"26.000"	"0.437776152635328"	"19"	"0.004959"	"0.06158"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"614.31519"	"1227.62309"	"1227.62409"	"-0.81"	"-0.00050"	"6/68"	"6"	"68"	"4537059.03173828"	"HCD"	"MS2"	"38.99657"	"233.7"	"100.000"	"43.4930"	"12679"	"12679"	"12656"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.6"	""	"221.2"	""	"272.5"	""	"514.5"	""	"512.9"	"461.8"	""	"421"	"22"	"33.000"	"26.000"	"0.129793247891842"	"22"	"0.002525"	"0.02481"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFEMATR"	"[R].eVFEmATR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"P61589"	"Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"614.31525"	"1227.62322"	"1227.62409"	"-0.71"	"-0.00044"	"5/68"	"5"	"68"	"4797093.77172852"	"HCD"	"MS2"	"15.14182"	"246.3"	"100.000"	"43.3459"	"12653"	"12653"	"12635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"245.2"	""	"244.9"	""	"273.1"	""	"580.7"	""	"498.0"	"502.8"	""	"422"	"23"	"33.000"	"26.000"	"0.0957816811131929"	"22"	"0.002373"	"0.02251"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"614.32831"	"1227.64934"	"1227.64924"	"0.08"	"0.00005"	"6/62"	"6"	"62"	"816011.643981934"	"HCD"	"MS2"	"4.911755"	"34.6"	"100.000"	"109.4537"	"39293"	"39293"	"39285"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.0"	""	"51.0"	""	"65.2"	""	"37.5"	""	"60.5"	"66.2"	""	"506"	"50"	"34.000"	"27.000"	"0.000283217784517189"	"17"	"0.00192"	"0.01611"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32831"	"1227.64934"	"1227.64924"	"0.08"	"0.00005"	"6/62"	"6"	"62"	"708359.777893066"	"HCD"	"MS2"	"4.811587"	"29.5"	"100.000"	"109.7135"	"39406"	"39406"	"39397"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.7"	""	"45.7"	""	"48.3"	""	"27.9"	""	"51.7"	"65.5"	""	"506"	"50"	"34.000"	"27.000"	"0.000258893127047031"	"16"	"0.0001991"	"0.005223"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"614.32861"	"1227.64995"	"1227.64924"	"0.58"	"0.00035"	"5/62"	"5"	"62"	"360074.818359375"	"HCD"	"MS2"	"6.019999"	"18.0"	"100.000"	"109.4329"	"39297"	"39297"	"39289"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.8"	""	"25.0"	""	"28.9"	""	"22.4"	""	"27.4"	"37.1"	""	"506"	"30"	"34.000"	"27.000"	"0.0244410872384423"	"18"	"0.003818"	"0.0414"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLMk.[I]"	"K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32922"	"1227.65117"	"1227.64924"	"1.57"	"0.00096"	"6/62"	"6"	"62"	"361490.510559082"	"HCD"	"MS2"	"13.60257"	"17.5"	"100.000"	"109.1794"	"39190"	"39190"	"39182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"30.4"	""	"26.5"	""	"16.9"	""	"29.9"	"40.4"	""	"499"	"44"	"33.000"	"26.000"	"0.000918481789238114"	"16"	"0.001488"	"0.01242"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLFDFQK"	"[K].NSLFDFQk.[N]"	"K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"614.33154"	"1227.65581"	"1227.65710"	"-1.05"	"-0.00065"	"5/76"	"5"	"76"	"347828.146484375"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"94.7379"	"33433"	"33433"	"33418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"22.4"	""	"25.2"	""	"33.9"	""	"33.5"	"36.5"	""	"506"	"38"	"34.000"	"27.000"	"0.00409374249523696"	"22"	"0.005832"	"0.07159"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"614.33215"	"1227.65703"	"1227.65710"	"-0.06"	"-0.00004"	"9/58"	"9"	"58"	"7926288.73858643"	"HCD"	"MS2"	"0.2774319"	"165.6"	"84.529"	"98.1462"	"34814"	"34814"	"34801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.8"	""	"234.6"	""	"248.6"	""	"265.2"	"1.0"	"282.7"	"276.4"	""	"517"	"46"	"34.000"	"27.000"	"0.000658355620293234"	"22"	"0.0001686"	"0.001187"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"614.33221"	"1227.65715"	"1227.65710"	"0.04"	"0.00002"	"9/58"	"9"	"58"	"5763844.32476807"	"HCD"	"MS2"	"0.3828169"	"259.1"	"100.000"	"98.2641"	"34892"	"34892"	"34875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.6"	""	"367.3"	""	"380.6"	""	"410.2"	"1.6"	"435.2"	"466.4"	""	"517"	"46"	"34.000"	"27.000"	"0.000656841444384495"	"22"	"9.9E-05"	"0.0009582"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"614.33228"	"1227.65727"	"1227.65710"	"0.14"	"0.00009"	"5/58"	"5"	"58"	"908530.434570313"	"HCD"	"MS2"	"18.97048"	"46.0"	"100.000"	"98.4668"	"34944"	"34944"	"34927"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.6"	""	"65.4"	""	"71.3"	""	"66.3"	""	"81.6"	"86.1"	""	"517"	"35"	"34.000"	"27.000"	"0.00832646282546768"	"27"	"9.9E-05"	"0.0007027"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"614.33234"	"1227.65740"	"1227.65710"	"0.24"	"0.00015"	"9/58"	"9"	"58"	"4102794.652771"	"HCD"	"MS2"	"1.503272"	"122.9"	"100.000"	"97.9686"	"34774"	"34774"	"34757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.6"	""	"184.6"	""	"179.2"	""	"195.2"	"1.4"	"207.7"	"205.7"	""	"500"	"46"	"33.000"	"26.000"	"0.000648544840529704"	"22"	"9.9E-05"	"0.0007827"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLYLGDDR"	"[K].fLYLGDDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"614.33240"	"1227.65752"	"1227.65710"	"0.34"	"0.00021"	"5/58"	"5"	"58"	"491813.27130127"	"HCD"	"MS2"	"28.1463"	"25.5"	"100.000"	"98.5666"	"35014"	"35014"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.7"	""	"37.6"	""	"43.2"	""	"36.2"	""	"44.4"	"46.1"	""	"500"	"38"	"33.000"	"26.000"	"0.00437461672156164"	"22"	"0.0001686"	"0.001941"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSAYSK"	"[R].dVSAYSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"614.35236"	"1227.69744"	"1227.69852"	"-0.89"	"-0.00054"	"6/58"	"6"	"58"	"829919.943969727"	"HCD"	"MS2"	"20.06935"	"87.8"	"100.000"	"42.5568"	"12331"	"12331"	"12303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.6"	""	"129.3"	""	"120.4"	""	"110.2"	""	"163.5"	"172.6"	""	"483"	"34"	"33.000"	"26.000"	"0.00988364493247975"	"23"	"0.0001991"	"0.003988"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"409.90573"	"1227.70264"	"1227.70472"	"-1.70"	"-0.00069"	"7/62"	"7"	"62"	"163120.781921387"	"HCD"	"MS2"	"40.02584"	"5.2"	"100.000"	"87.3582"	"30459"	"30459"	"30433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.2"	""	"7.6"	""	"6.1"	""	"8.9"	""	"11.1"	"9.7"	""	"509"	"20"	"34.000"	"27.000"	"0.256264109722784"	"20"	"0.001049"	"0.008525"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"614.35510"	"1227.70293"	"1227.70472"	"-1.46"	"-0.00090"	"7/62"	"7"	"62"	"10471881.9799194"	"HCD"	"MS2"	"0"	"290.3"	"77.007"	"87.3262"	"30446"	"30446"	"30433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"355.9"	""	"351.4"	""	"370.9"	""	"501.0"	""	"557.5"	"621.5"	""	"491"	"23"	"33.000"	"26.000"	"0.136789101362789"	"25"	"0.001103"	"0.008997"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"614.35547"	"1227.70366"	"1227.70472"	"-0.87"	"-0.00053"	"7/62"	"7"	"62"	"2926229.44989014"	"HCD"	"MS2"	"2.423749"	"122.5"	"100.000"	"87.8234"	"30682"	"30682"	"30665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.2"	""	"144.6"	""	"154.2"	""	"210.6"	""	"226.6"	"269.2"	""	"492"	"23"	"33.000"	"26.000"	"0.134565926871917"	"26"	"0.001103"	"0.008953"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"614.35553"	"1227.70378"	"1227.70472"	"-0.77"	"-0.00047"	"7/62"	"7"	"62"	"2036364.57275391"	"HCD"	"MS2"	"1.569541"	"84.7"	"100.000"	"87.0469"	"30333"	"30333"	"30316"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.4"	""	"123.4"	""	"99.1"	""	"138.3"	""	"159.3"	"174.9"	""	"492"	"25"	"33.000"	"26.000"	"0.0841269428583725"	"26"	"0.0001991"	"0.003429"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"614.35559"	"1227.70391"	"1227.70472"	"-0.67"	"-0.00041"	"7/62"	"7"	"62"	"1854095.31689453"	"HCD"	"MS2"	"6.754392"	"82.6"	"100.000"	"86.9862"	"30344"	"30344"	"30327"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.7"	""	"98.5"	""	"106.7"	""	"151.1"	"0.0"	"142.6"	"162.1"	""	"493"	"26"	"33.000"	"26.000"	"0.0691539391755098"	"25"	"0.0001991"	"0.003018"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"614.35565"	"1227.70403"	"1227.70472"	"-0.57"	"-0.00035"	"7/62"	"7"	"62"	"9932887.68103027"	"HCD"	"MS2"	"0.1914144"	"370.8"	"100.000"	"87.2701"	"30458"	"30458"	"30444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"464.8"	""	"469.7"	""	"452.4"	""	"616.6"	""	"713.5"	"804.2"	""	"493"	"24"	"33.000"	"26.000"	"0.101816209240575"	""	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"614.35577"	"1227.70427"	"1227.70472"	"-0.37"	"-0.00023"	"4/62"	"4"	"62"	"425659.139160156"	"HCD"	"MS2"	"23.86986"	"29.9"	"100.000"	"88.1867"	"30790"	"30790"	"30772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.3"	""	"34.4"	""	"41.1"	""	"41.1"	""	"59.9"	"61.1"	""	"486"	"18"	"33.000"	"26.000"	"0.414578020527759"	""	"0.004073"	"0.04429"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"614.35596"	"1227.70464"	"1227.70472"	"-0.07"	"-0.00004"	"7/62"	"7"	"62"	"10495844.4578247"	"HCD"	"MS2"	"0"	"367.4"	"99.299"	"87.5399"	"30567"	"30567"	"30554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"467.4"	""	"468.5"	""	"462.1"	""	"637.5"	""	"664.0"	"791.7"	""	"486"	"23"	"33.000"	"26.000"	"0.109800994483106"	"25"	"0.0009352"	"0.008013"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"614.35608"	"1227.70488"	"1227.70472"	"0.13"	"0.00008"	"7/62"	"7"	"62"	"2824679.33355713"	"HCD"	"MS2"	"3.946336"	"117.1"	"100.000"	"87.8867"	"30671"	"30671"	"30663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.6"	""	"145.4"	""	"156.5"	""	"199.3"	"2.9"	"221.3"	"248.7"	""	"486"	"22"	"33.000"	"26.000"	"0.164288163020252"	"26"	"0.0005161"	"0.006905"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGLQIWR"	"[K].ePGLQIWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"614.35638"	"1227.70549"	"1227.70472"	"0.63"	"0.00038"	"7/62"	"7"	"62"	"9712376.20684814"	"HCD"	"MS2"	"0.1989782"	"336.3"	"100.000"	"87.6100"	"30560"	"30560"	"30546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"421.5"	""	"433.2"	""	"414.1"	""	"538.0"	""	"668.8"	"720.1"	""	"470"	"25"	"33.000"	"26.000"	"0.0669989292863419"	"18"	"0.0007633"	"0.00752"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGMGTSVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"614.81244"	"1228.61760"	"1228.61934"	"-1.41"	"-0.00087"	"8/70"	"8"	"70"	"3140333.3949585"	"HCD"	"MS2"	"24.42594"	"190.1"	"100.000"	"38.7487"	"10756"	"10756"	"10734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"285.1"	""	"233.3"	""	"243.8"	""	"235.2"	""	"384.6"	"427.1"	""	"493"	"29"	"33.000"	"26.000"	"0.0284981667700353"	"19"	"9.9E-05"	"0.0004277"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGMGTSVER"	"[R].yGMGTSVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"614.81335"	"1228.61943"	"1228.61934"	"0.08"	"0.00005"	"8/70"	"8"	"70"	"2970396.02563477"	"HCD"	"MS2"	"16.85756"	"186.2"	"100.000"	"38.6451"	"10750"	"10750"	"10723"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.1"	""	"231.8"	""	"238.0"	""	"240.1"	""	"370.9"	"403.0"	""	"487"	"30"	"33.000"	"26.000"	"0.0219027661102564"	"20"	"9.9E-05"	"0.0004566"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSFPEPLR"	"[K].gPSFPEPLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"614.84796"	"1228.68865"	"1228.68874"	"-0.08"	"-0.00005"	"6/70"	"6"	"70"	"598940.801147461"	"HCD"	"MS2"	"5.056088"	"33.8"	"100.000"	"72.8908"	"24610"	"24610"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.0"	""	"37.4"	""	"49.0"	""	"57.0"	""	"77.3"	"68.3"	""	"560"	"25"	"34.000"	"27.000"	"0.0953142931162801"	"19"	"0.00307"	"0.03388"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"615.31360"	"1229.61992"	"1229.61861"	"1.07"	"0.00066"	"7/64"	"7"	"64"	"2420437.659729"	"HCD"	"MS2"	"10.9332"	"109.1"	"100.000"	"97.8533"	"34695"	"34695"	"34677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.5"	""	"158.5"	""	"158.6"	""	"135.4"	""	"191.2"	"224.9"	""	"392"	"24"	"32.000"	"25.000"	"0.0728209049030457"	"20"	"0.0001991"	"0.003777"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"615.31360"	"1229.61992"	"1229.61861"	"1.07"	"0.00066"	"7/64"	"7"	"64"	"3836232.61755371"	"HCD"	"MS2"	"17.29931"	"197.5"	"100.000"	"97.9268"	"34725"	"34725"	"34707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.2"	""	"299.9"	""	"300.4"	""	"233.4"	""	"342.9"	"395.5"	""	"392"	"30"	"32.000"	"25.000"	"0.0179166195328169"	"21"	"0.0001991"	"0.003292"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTPTISR"	"[R].yYTPTISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"615.33936"	"1229.67143"	"1229.67275"	"-1.07"	"-0.00066"	"5/64"	"5"	"64"	"2863172.15325928"	"HCD"	"MS2"	"1.319192"	"156.6"	"100.000"	"53.8405"	"16914"	"16914"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"240.5"	""	"207.6"	""	"226.1"	""	"236.7"	"1.4"	"289.6"	"281.6"	""	"603"	"24"	"34.000"	"27.000"	"0.110735613600172"	"20"	"0.009514"	"0.1272"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTPTISR"	"[R].yYTPTISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"615.33954"	"1229.67180"	"1229.67275"	"-0.78"	"-0.00048"	"5/64"	"5"	"64"	"5948306.27886963"	"HCD"	"MS2"	"0"	"302.5"	"100.000"	"53.8608"	"16890"	"16890"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"478.3"	""	"402.4"	""	"433.9"	""	"446.8"	"1.5"	"545.9"	"555.4"	""	"617"	"26"	"34.000"	"27.000"	"0.073156878819662"	"23"	"0.0009352"	"0.007826"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYTPTISR"	"[R].yYTPTISR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"615.33972"	"1229.67217"	"1229.67275"	"-0.48"	"-0.00029"	"9/64"	"9"	"64"	"5949527.53710938"	"HCD"	"MS2"	"0"	"288.0"	"100.000"	"53.5387"	"16792"	"16792"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"450.4"	""	"379.8"	""	"420.5"	""	"418.9"	""	"523.3"	"538.6"	""	"612"	"27"	"34.000"	"27.000"	"0.0629102522371147"	"20"	"0.001261"	"0.009617"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENLGEVLR"	"[K].aENLGEVLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"615.35583"	"1229.70439"	"1229.70512"	"-0.59"	"-0.00036"	"6/84"	"6"	"84"	"1172408.7791748"	"HCD"	"MS2"	"7.924915"	"60.6"	"100.000"	"68.2790"	"22739"	"22739"	"22716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.6"	""	"75.7"	""	"74.8"	""	"96.8"	"1.0"	"120.6"	"123.6"	""	"603"	"42"	"34.000"	"27.000"	"0.0017876698536087"	"24"	"0"	"0.0002572"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENLGEVLR"	"[K].aENLGEVLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"Q4KLL4"	"Transmembrane 9 superfamily member 4 OS=Rattus norvegicus OX=10116 GN=Tm9sf4 PE=2 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"615.35620"	"1229.70513"	"1229.70512"	"0.01"	"0.00000"	"6/84"	"6"	"84"	"1178180.84008789"	"HCD"	"MS2"	"15.78349"	"57.0"	"100.000"	"68.3492"	"22800"	"22800"	"22778"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.0"	""	"67.6"	""	"72.0"	""	"99.8"	"2.2"	"104.7"	"110.7"	""	"571"	"43"	"34.000"	"27.000"	"0.00133846220602473"	"23"	"0"	"0.0001325"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHAINGK"	"[K].mHAInGk.[ML]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"2"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635; Q920H8"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3; Hephaestin OS=Rattus norvegicus OX=10116 GN=Heph PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"410.57324"	"1229.70517"	"1229.70765"	"-2.01"	"-0.00083"	"5/54"	"5"	"54"	"4931034.98529053"	"HCD"	"MS2"	"16.84336"	"249.2"	"100.000"	"33.0443"	"8443"	"8443"	"8419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"406.4"	""	"343.3"	""	"281.6"	""	"390.3"	""	"486.0"	"456.8"	""	"571"	"20"	"34.000"	"27.000"	"0.309461133953054"	"15"	"0.003043"	"0.03275"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHAINGK"	"[K].mHAInGk.[ML]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"2"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635; Q920H8"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3; Hephaestin OS=Rattus norvegicus OX=10116 GN=Heph PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"410.57376"	"1229.70673"	"1229.70765"	"-0.75"	"-0.00031"	"9/54"	"9"	"54"	"5310489.36279297"	"HCD"	"MS2"	"9.515306"	"271.2"	"100.000"	"33.0095"	"8466"	"8466"	"8446"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"408.7"	""	"367.2"	""	"304.0"	""	"454.0"	"1.3"	"547.4"	"489.2"	""	"615"	"24"	"34.000"	"27.000"	"0.130270212060234"	"16"	"0.002525"	"0.0239"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHAINGK"	"[K].mHAInGk.[ML]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"2"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635; Q920H8"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3; Hephaestin OS=Rattus norvegicus OX=10116 GN=Heph PE=1 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"410.57468"	"1229.70948"	"1229.70765"	"1.49"	"0.00061"	"5/54"	"5"	"54"	"1713438.79241943"	"HCD"	"MS2"	"44.3854"	"111.1"	"100.000"	"35.1718"	"9342"	"9342"	"9326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.2"	""	"164.2"	""	"131.2"	""	"189.7"	""	"228.5"	"187.4"	""	"573"	"26"	"34.000"	"27.000"	"0.0688849942201987"	"21"	"0.002084"	"0.01881"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDTTGK"	"[R].iHDTTGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"410.57965"	"1229.72440"	"1229.72541"	"-0.82"	"-0.00034"	"6/52"	"6"	"52"	"17970725.3023682"	"HCD"	"MS2"	"60.14045"	"524.9"	"57.251"	"24.7680"	"5178"	"5178"	"5160"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"591.7"	""	"591.5"	""	"474.7"	""	"1087.6"	""	"1252.6"	"995.7"	""	"629"	"22"	"34.000"	"27.000"	"0.209228407625448"	"14"	"0.007069"	"0.08967"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDTTGK"	"[R].iHDTTGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"410.57971"	"1229.72458"	"1229.72541"	"-0.67"	"-0.00027"	"9/52"	"9"	"52"	"17494513.5344849"	"HCD"	"MS2"	"60.08273"	"603.0"	"71.111"	"24.8971"	"5194"	"5194"	"5177"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"709.7"	""	"648.7"	""	"547.1"	""	"1256.5"	""	"1413.3"	"1164.1"	""	"629"	"22"	"34.000"	"27.000"	"0.196164605759221"	"14"	"0.004392"	"0.05175"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDTTGK"	"[R].iHDTTGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"615.36621"	"1229.72515"	"1229.72541"	"-0.21"	"-0.00013"	"6/52"	"6"	"52"	"1322140.26928711"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"24.7153"	"5157"	"5157"	"5133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.4"	""	"82.7"	""	"77.0"	""	"204.6"	"0.7"	"241.5"	"193.1"	""	"612"	"19"	"34.000"	"27.000"	"0.409941066352336"	"17"	"0.002328"	"0.0223"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"615.37402"	"1229.74077"	"1229.74150"	"-0.60"	"-0.00037"	"8/78"	"8"	"78"	"454264.174072266"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"86.3329"	"30083"	"30083"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.7"	""	"32.4"	""	"34.6"	""	"40.0"	""	"40.7"	"42.3"	""	"657"	"40"	"35.000"	"28.000"	"0.0032925727070859"	"22"	"0"	"0.0001282"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7869"	"0.0000"	"1"	"1"	"1"	"615.37408"	"1229.74089"	"1229.74150"	"-0.50"	"-0.00031"	"8/78"	"8"	"78"	"2207694.05993652"	"HCD"	"MS2"	"5.851941"	"93.6"	"100.000"	"86.6107"	"30159"	"30159"	"30148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.8"	""	"134.2"	""	"141.9"	""	"165.1"	""	"161.2"	"179.2"	""	"657"	"61"	"35.000"	"28.000"	"2.4240153959741E-05"	""	"0"	"1.799E-06"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7869"	"0.0000"	"1"	"1"	"1"	"615.37408"	"1229.74089"	"1229.74150"	"-0.50"	"-0.00031"	"8/78"	"8"	"78"	"1776565.50079346"	"HCD"	"MS2"	"5.152607"	"78.0"	"100.000"	"86.8832"	"30268"	"30268"	"30257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.0"	""	"111.2"	""	"116.7"	""	"123.1"	"2.9"	"140.4"	"158.9"	""	"657"	"61"	"35.000"	"28.000"	"2.52659349634151E-05"	""	"0"	"1.249E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"615.37408"	"1229.74089"	"1229.74150"	"-0.50"	"-0.00031"	"8/78"	"8"	"78"	"2396992.24005127"	"HCD"	"MS2"	"5.504084"	"90.4"	"100.000"	"86.6260"	"30198"	"30198"	"30190"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.0"	""	"139.3"	""	"129.2"	""	"145.5"	""	"172.1"	"174.5"	""	"657"	"64"	"35.000"	"28.000"	"1.24604972563855E-05"	""	"0"	"1.359E-06"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSIGDGIAR"	"[R].vLSIGDGIAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"615.37421"	"1229.74114"	"1229.74150"	"-0.30"	"-0.00018"	"8/78"	"8"	"78"	"1327764.46569824"	"HCD"	"MS2"	"7.68296"	"63.2"	"100.000"	"86.9237"	"30318"	"30318"	"30299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.0"	""	"87.6"	""	"86.9"	""	"98.4"	""	"119.5"	"129.9"	""	"602"	"60"	"34.000"	"27.000"	"2.74515262646129E-05"	"27"	"0"	"2.461E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLDLDK"	"[M].aPLDLDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"615.37866"	"1229.75005"	"1229.75056"	"-0.42"	"-0.00026"	"6/52"	"6"	"52"	"964246.557922363"	"HCD"	"MS2"	"48.46706"	"63.7"	"100.000"	"73.2528"	"24758"	"24758"	"24730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.4"	""	"74.4"	""	"80.4"	""	"110.8"	""	"135.4"	"128.0"	""	"620"	"30"	"34.000"	"27.000"	"0.0282073114515998"	"23"	"0.004893"	"0.06078"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLDLDK"	"[M].aPLDLDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"615.37866"	"1229.75005"	"1229.75056"	"-0.42"	"-0.00026"	"5/52"	"5"	"52"	"909156.692077637"	"HCD"	"MS2"	"47.9309"	"58.0"	"100.000"	"73.3207"	"24815"	"24815"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.6"	""	"62.4"	""	"73.3"	""	"96.4"	""	"124.7"	"125.5"	""	"620"	"18"	"34.000"	"27.000"	"0.505081770118314"	"20"	"0.006343"	"0.07935"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDQFYR"	"[R].sVSDQFYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.81897"	"1230.63066"	"1230.63162"	"-0.78"	"-0.00048"	"5/68"	"5"	"68"	"1900288.98913574"	"HCD"	"MS2"	"4.699955"	"136.5"	"100.000"	"48.6693"	"14778"	"14778"	"14756"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.7"	""	"163.2"	""	"165.4"	""	"243.2"	"4.0"	"299.6"	"266.9"	""	"482"	"21"	"33.000"	"26.000"	"0.206546120700519"	"14"	"0.001261"	"0.009579"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDQFYR"	"[R].sVSDQFYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"615.81897"	"1230.63066"	"1230.63162"	"-0.78"	"-0.00048"	"6/68"	"6"	"68"	"2268658.60852051"	"HCD"	"MS2"	"4.243144"	"138.0"	"100.000"	"48.2977"	"14663"	"14663"	"14655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.2"	""	"164.2"	""	"208.0"	""	"224.2"	"3.2"	"259.1"	"257.8"	""	"482"	"33"	"33.000"	"26.000"	"0.0124170103344203"	"20"	"0.0001991"	"0.003194"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"615.84717"	"1230.68706"	"1230.68913"	"-1.68"	"-0.00104"	"7/72"	"7"	"72"	"2523820.56903076"	"HCD"	"MS2"	"32.82354"	"163.4"	"100.000"	"49.0439"	"14965"	"14965"	"14943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.1"	""	"204.1"	""	"244.6"	""	"250.0"	""	"301.1"	"334.3"	""	"779"	"29"	"35.000"	"28.000"	"0.0467204978576682"	"20"	"0.0001991"	"0.002392"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"615.84772"	"1230.68816"	"1230.68913"	"-0.79"	"-0.00049"	"6/70"	"6"	"70"	"722655.241577148"	"HCD"	"MS2"	"20.68061"	"42.5"	"100.000"	"90.0185"	"31527"	"31527"	"31507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.7"	""	"42.1"	""	"48.6"	""	"70.5"	""	"81.1"	"110.5"	""	"781"	"36"	"35.000"	"28.000"	"0.0098769086761222"	""	"0"	"0.0003175"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"615.84784"	"1230.68840"	"1230.68913"	"-0.59"	"-0.00037"	"6/72"	"6"	"72"	"3427039.68615723"	"HCD"	"MS2"	"0"	"188.5"	"100.000"	"48.7410"	"14842"	"14842"	"14830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.3"	""	"260.6"	""	"232.3"	""	"279.6"	"5.6"	"395.8"	"393.6"	""	"781"	"32"	"35.000"	"28.000"	"0.0264619008721969"	""	"9.9E-05"	"0.0007659"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"615.84796"	"1230.68865"	"1230.68913"	"-0.40"	"-0.00024"	"6/70"	"6"	"70"	"557612.943908691"	"HCD"	"MS2"	"9.407246"	"27.0"	"100.000"	"89.7021"	"31399"	"31399"	"31384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	""	"28.2"	""	"28.4"	""	"44.8"	""	"56.4"	"65.7"	""	"751"	"31"	"35.000"	"28.000"	"0.0311608963201666"	"27"	"0.0001686"	"0.001382"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDILDQER"	"[K].lDILDQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"615.84802"	"1230.68877"	"1230.68913"	"-0.30"	"-0.00018"	"6/70"	"6"	"70"	"971690.955566406"	"HCD"	"MS2"	"11.39504"	"52.1"	"100.000"	"89.8164"	"31485"	"31485"	"31471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.6"	""	"56.2"	""	"50.7"	""	"72.5"	"0.7"	"109.1"	"137.0"	""	"751"	"41"	"35.000"	"28.000"	"0.00326294641197006"	""	"0"	"0.0002739"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"615.84802"	"1230.68877"	"1230.68913"	"-0.30"	"-0.00018"	"7/72"	"7"	"72"	"2634277.18432617"	"HCD"	"MS2"	"24.27758"	"170.1"	"100.000"	"49.3446"	"15053"	"15053"	"15036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"228.8"	""	"233.4"	""	"235.6"	""	"248.4"	""	"332.5"	"334.8"	""	"751"	"32"	"35.000"	"28.000"	"0.0225740738424971"	"20"	"0.0001686"	"0.001386"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTEEISPR"	"[R].lGTEEISPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"615.84808"	"1230.68889"	"1230.68913"	"-0.20"	"-0.00012"	"6/72"	"6"	"72"	"3354354.16162109"	"HCD"	"MS2"	"10.82487"	"182.5"	"100.000"	"49.0666"	"14939"	"14939"	"14922"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"243.8"	""	"240.2"	""	"241.4"	""	"273.9"	"0.3"	"363.0"	"368.5"	""	"751"	"33"	"35.000"	"28.000"	"0.0178899835545434"	"26"	"9.9E-05"	"0.0004434"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNTNIDGR"	"[R].vLNTNIDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"615.85309"	"1230.69890"	"1230.70037"	"-1.19"	"-0.00073"	"7/82"	"7"	"82"	"1539875.69055176"	"HCD"	"MS2"	"6.74487"	"96.3"	"100.000"	"51.3204"	"15891"	"15891"	"15873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.2"	""	"128.2"	""	"131.3"	""	"173.6"	"2.3"	"180.6"	"153.8"	""	"711"	"46"	"35.000"	"28.000"	"0.000930764059421849"	""	"0.0001686"	"0.001492"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNTNIDGR"	"[R].vLNTNIDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"615.85333"	"1230.69939"	"1230.70037"	"-0.79"	"-0.00049"	"6/82"	"6"	"82"	"1948444.34136963"	"HCD"	"MS2"	"12.10098"	"112.8"	"100.000"	"51.6008"	"15968"	"15968"	"15954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.5"	""	"153.5"	""	"157.5"	""	"206.6"	"1.7"	"217.1"	"173.3"	""	"717"	"48"	"35.000"	"28.000"	"0.000511080322306385"	""	"0"	"0.0003595"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNTNIDGR"	"[R].vLNTNIDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"615.85339"	"1230.69951"	"1230.70037"	"-0.69"	"-0.00043"	"7/82"	"7"	"82"	"10468243.2711792"	"HCD"	"MS2"	"0"	"424.5"	"100.000"	"51.0175"	"15768"	"15768"	"15750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"655.9"	""	"604.9"	""	"681.0"	""	"710.1"	"4.2"	"721.4"	"635.4"	""	"717"	"52"	"35.000"	"28.000"	"0.000217514974157479"	""	"9.9E-05"	"0.0007645"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLNTNIDGR"	"[R].vLNTNIDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"615.85370"	"1230.70012"	"1230.70037"	"-0.20"	"-0.00012"	"7/82"	"7"	"82"	"10226476.9066772"	"HCD"	"MS2"	"0"	"423.6"	"100.000"	"51.3172"	"15854"	"15854"	"15837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"659.6"	""	"606.3"	""	"692.7"	""	"703.0"	""	"717.9"	"624.1"	""	"691"	"52"	"35.000"	"28.000"	"0.000209145272227477"	""	"9.9E-05"	"0.0005816"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QALNEISAR"	"[R].qALNEISAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"615.85382"	"1230.70036"	"1230.70037"	"0.00"	"0.00000"	"6/84"	"6"	"84"	"832048.904663086"	"HCD"	"MS2"	"7.665482"	"61.8"	"100.000"	"43.1964"	"12558"	"12558"	"12530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.7"	""	"67.9"	""	"77.3"	""	"115.4"	"0.8"	"118.2"	"134.4"	""	"691"	"28"	"35.000"	"28.000"	"0.0495961599223689"	""	"0.001217"	"0.009305"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QALNEISAR"	"[R].qALNEISAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"Q08850"	"Syntaxin-4 OS=Rattus norvegicus OX=10116 GN=Stx4 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"615.85437"	"1230.70146"	"1230.70037"	"0.89"	"0.00055"	"7/84"	"7"	"84"	"761097.241760254"	"HCD"	"MS2"	"10.62271"	"60.6"	"100.000"	"43.0606"	"12537"	"12537"	"12507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.9"	""	"65.6"	""	"69.2"	""	"114.0"	"0.2"	"126.1"	"134.1"	""	"809"	"25"	"36.000"	"29.000"	"0.124141939430422"	"23"	"0.0001991"	"0.002148"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMESPIVR"	"[R].gIMESPIVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"615.85748"	"1230.70769"	"1230.70776"	"-0.06"	"-0.00004"	"7/66"	"7"	"66"	"552455.410949707"	"HCD"	"MS2"	"8.361615"	"36.6"	"100.000"	"68.6890"	"22906"	"22906"	"22886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.3"	""	"47.5"	""	"53.1"	""	"55.3"	""	"67.8"	"69.0"	""	"772"	"35"	"35.000"	"28.000"	"0.0128702595326609"	"19"	"9.9E-05"	"0.0008724"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMESPIVR"	"[R].gIMESPIVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"615.85754"	"1230.70781"	"1230.70776"	"0.04"	"0.00003"	"6/66"	"6"	"66"	"559853.981201172"	"HCD"	"MS2"	"17.60377"	"40.0"	"100.000"	"68.7411"	"22960"	"22960"	"22938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"57.3"	""	"56.6"	""	"55.8"	""	"77.9"	"78.7"	""	"772"	"29"	"35.000"	"28.000"	"0.0470529985184999"	"20"	"0.001488"	"0.01283"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINGVSPK"	"[R].gInGVSPk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"615.87567"	"1230.74407"	"1230.74581"	"-1.42"	"-0.00087"	"7/66"	"7"	"66"	"5982371.91131592"	"HCD"	"MS2"	"6.131831"	"381.9"	"100.000"	"46.7103"	"14019"	"14019"	"14003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"528.6"	""	"456.2"	""	"524.0"	""	"666.3"	""	"737.5"	"713.1"	""	"733"	"39"	"35.000"	"28.000"	"0.00493257819761505"	"24"	"0.0001686"	"0.001253"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINGVSPK"	"[R].gInGVSPk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"615.87567"	"1230.74407"	"1230.74581"	"-1.42"	"-0.00087"	"7/66"	"7"	"66"	"5953070.7791748"	"HCD"	"MS2"	"13.04136"	"359.7"	"100.000"	"47.0507"	"14119"	"14119"	"14100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"509.2"	""	"427.7"	""	"466.4"	""	"613.4"	""	"720.6"	"676.6"	""	"733"	"37"	"35.000"	"28.000"	"0.00721230325177558"	"24"	"0.0001686"	"0.001369"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINGVSPK"	"[R].gInGVSPk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"615.87579"	"1230.74431"	"1230.74581"	"-1.22"	"-0.00075"	"8/66"	"8"	"66"	"1415104.42126465"	"HCD"	"MS2"	"4.095709"	"104.7"	"100.000"	"47.0410"	"14153"	"14153"	"14129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.4"	""	"106.7"	""	"132.4"	""	"225.7"	"3.6"	"203.3"	"196.4"	""	"729"	"20"	"35.000"	"28.000"	"0.388774286188429"	"26"	"0.000885"	"0.007775"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINGVSPK"	"[R].gInGVSPk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"615.87622"	"1230.74516"	"1230.74581"	"-0.52"	"-0.00032"	"7/66"	"7"	"66"	"2433945.8572998"	"HCD"	"MS2"	"38.59372"	"164.2"	"100.000"	"49.4202"	"15083"	"15083"	"15064"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"222.0"	""	"223.6"	""	"231.2"	""	"261.5"	""	"307.1"	"314.4"	""	"721"	"29"	"35.000"	"28.000"	"0.0434415456504033"	""	"0.0001991"	"0.002153"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GINGVSPK"	"[R].gInGVSPk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.4516"	"0.0000"	"1"	"1"	"1"	"615.87628"	"1230.74529"	"1230.74581"	"-0.42"	"-0.00026"	"7/66"	"7"	"66"	"2535241.73608398"	"HCD"	"MS2"	"45.74341"	"178.5"	"100.000"	"49.1039"	"14989"	"14989"	"14972"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"243.8"	""	"242.1"	""	"256.3"	""	"269.8"	"2.9"	"334.2"	"342.8"	""	"706"	"31"	"35.000"	"28.000"	"0.0301838549648293"	""	"0.0001991"	"0.002645"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAVSPSK"	"[K].sPAVSPSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"615.87634"	"1230.74541"	"1230.74581"	"-0.32"	"-0.00020"	"5/68"	"5"	"68"	"424522.163146973"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"34.1759"	"8940"	"8940"	"8913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.8"	""	"44.0"	""	"46.2"	""	"77.1"	"1.5"	"80.4"	"82.0"	""	"706"	"19"	"35.000"	"28.000"	"0.455800403585578"	"18"	"0.009239"	"0.1189"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8030"	"0.0000"	"1"	"1"	"1"	"615.88098"	"1230.75469"	"1230.75704"	"-1.91"	"-0.00118"	"8/68"	"8"	"68"	"4150012.82824707"	"HCD"	"MS2"	"15.04626"	"292.7"	"100.000"	"32.4399"	"8199"	"8199"	"8180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"401.5"	""	"363.8"	""	"352.4"	""	"499.5"	""	"543.7"	"621.6"	""	"623"	"66"	"34.000"	"27.000"	"7.71716970952768E-06"	""	"0"	"1.8E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"615.88159"	"1230.75591"	"1230.75704"	"-0.92"	"-0.00057"	"8/68"	"8"	"68"	"899798.711486816"	"HCD"	"MS2"	"8.171984"	"75.8"	"100.000"	"32.7501"	"8323"	"8323"	"8298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.6"	""	"95.0"	""	"91.3"	""	"126.6"	"1.6"	"134.3"	"166.7"	""	"616"	"63"	"34.000"	"27.000"	"1.73201128158627E-05"	""	"0"	"5.29E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"615.88220"	"1230.75713"	"1230.75704"	"0.07"	"0.00004"	"8/68"	"8"	"68"	"2214008.43200684"	"HCD"	"MS2"	"2.746304"	"158.5"	"100.000"	"32.5662"	"8285"	"8285"	"8269"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.7"	""	"198.9"	""	"184.6"	""	"262.7"	""	"295.1"	"364.7"	""	"609"	"66"	"34.000"	"27.000"	"7.5960409435413E-06"	""	"0"	"8.22E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAVGAANK"	"[K].aAAVGAANk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"615.88251"	"1230.75774"	"1230.75704"	"0.57"	"0.00035"	"8/68"	"8"	"68"	"1799757.77459717"	"HCD"	"MS2"	"57.68152"	"151.2"	"100.000"	"32.2792"	"8171"	"8171"	"8147"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.1"	""	"205.0"	""	"177.6"	""	"265.8"	""	"272.7"	"311.6"	""	"657"	"53"	"35.000"	"28.000"	"0.000164261344739938"	"25"	"0"	"9.206E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"616.31067"	"1231.61406"	"1231.61563"	"-1.28"	"-0.00079"	"6/66"	"6"	"66"	"6950998.4052124"	"HCD"	"MS2"	"8.176643"	"369.6"	"100.000"	"55.5842"	"17625"	"17625"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"614.6"	""	"521.4"	""	"393.9"	""	"672.2"	""	"678.3"	"622.7"	""	"429"	"34"	"33.000"	"26.000"	"0.00912908596171878"	"17"	"0.0001991"	"0.003628"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSFDEVR"	"[K].sYSFDEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"616.31079"	"1231.61431"	"1231.61563"	"-1.08"	"-0.00066"	"5/66"	"5"	"66"	"1939639.97442627"	"HCD"	"MS2"	"10.59303"	"125.4"	"100.000"	"55.3115"	"17515"	"17515"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.4"	""	"159.4"	""	"153.7"	""	"197.1"	"4.3"	"255.8"	"245.0"	""	"446"	"30"	"33.000"	"26.000"	"0.0207637056229326"	""	"0.0001991"	"0.002531"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSFDEVR"	"[K].sYSFDEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"616.31079"	"1231.61431"	"1231.61563"	"-1.08"	"-0.00066"	"5/66"	"5"	"66"	"1963717.99176025"	"HCD"	"MS2"	"0"	"120.7"	"100.000"	"55.6866"	"17634"	"17634"	"17608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.1"	""	"151.0"	""	"162.8"	""	"188.5"	""	"254.8"	"227.1"	""	"446"	"33"	"33.000"	"26.000"	"0.010947245638203"	""	"0.0001991"	"0.003175"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSTFR"	"[R].eFTDSTFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.31079"	"1231.61431"	"1231.61563"	"-1.08"	"-0.00066"	"6/66"	"6"	"66"	"8403515.40411377"	"HCD"	"MS2"	"11.22972"	"471.0"	"100.000"	"55.9502"	"17740"	"17740"	"17730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"767.5"	""	"630.5"	""	"498.0"	""	"876.0"	""	"878.5"	"812.2"	""	"446"	"34"	"33.000"	"26.000"	"0.00996104410496647"	"15"	"0.0005161"	"0.006579"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYVYGMR"	"[K].dVYVYGMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"616.32062"	"1231.63396"	"1231.63426"	"-0.24"	"-0.00015"	"6/56"	"6"	"56"	"475469.989868164"	"HCD"	"MS2"	"41.8273"	"38.8"	"100.000"	"69.7529"	"23338"	"23338"	"23314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.4"	""	"52.2"	""	"56.0"	""	"58.1"	""	"76.0"	"69.5"	""	"531"	"24"	"34.000"	"27.000"	"0.106921372613409"	"19"	"0.0009352"	"0.008224"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANWEAQQR"	"[K].aNWEAQQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"616.32190"	"1231.63652"	"1231.63810"	"-1.28"	"-0.00079"	"6/68"	"6"	"68"	"1132586.43481445"	"HCD"	"MS2"	"40.14532"	"82.3"	"100.000"	"31.3699"	"7805"	"7805"	"7776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.6"	""	"99.3"	""	"90.2"	""	"147.7"	""	"155.9"	"172.4"	""	"557"	"19"	"34.000"	"27.000"	"0.367134501687959"	"19"	"0.003001"	"0.03228"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANWEAQQR"	"[K].aNWEAQQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"616.32227"	"1231.63725"	"1231.63810"	"-0.69"	"-0.00042"	"6/68"	"6"	"68"	"1030249.05517578"	"HCD"	"MS2"	"11.9559"	"74.9"	"100.000"	"31.5187"	"7827"	"7827"	"7802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.4"	""	"87.2"	""	"90.6"	""	"130.5"	""	"147.3"	"146.1"	""	"553"	"15"	"34.000"	"27.000"	"0.898866377270725"	"16"	"0.002189"	"0.02014"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIPETSSR"	"[R].nVIPETSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"616.34485"	"1231.68242"	"1231.68438"	"-1.59"	"-0.00098"	"6/86"	"6"	"86"	"1120747.30090332"	"HCD"	"MS2"	"0"	"70.0"	"100.000"	"36.5502"	"9861"	"9861"	"9843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.6"	""	"70.6"	""	"74.5"	""	"137.6"	"1.4"	"143.8"	"148.2"	""	"797"	"26"	"36.000"	"29.000"	"0.0919238754704947"	"29"	"0.006613"	"0.0826"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIPETSSR"	"[R].nVIPETSSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"616.34558"	"1231.68389"	"1231.68438"	"-0.40"	"-0.00025"	"4/86"	"4"	"86"	"1107159.21960449"	"HCD"	"MS2"	"16.2107"	"72.4"	"100.000"	"36.4382"	"9853"	"9853"	"9836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.9"	""	"73.4"	""	"82.4"	""	"128.8"	"4.6"	"160.5"	"159.1"	""	"764"	"21"	"35.000"	"28.000"	"0.331942883987367"	"27"	"0.00307"	"0.03413"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"616.34924"	"1231.69121"	"1231.69178"	"-0.46"	"-0.00028"	"7/62"	"7"	"62"	"1529606.84924316"	"HCD"	"MS2"	"0"	"60.1"	"100.000"	"71.3636"	"23992"	"23992"	"23974"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.6"	""	"70.5"	""	"77.1"	""	"141.4"	"1.6"	"103.6"	"104.6"	""	"853"	"34"	"36.000"	"29.000"	"0.01773858753757"	"19"	"0.001615"	"0.01489"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"616.34937"	"1231.69145"	"1231.69178"	"-0.26"	"-0.00016"	"7/62"	"7"	"62"	"1048298.0982666"	"HCD"	"MS2"	"4.272819"	"45.2"	"100.000"	"71.5773"	"24110"	"24110"	"24094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.9"	""	"48.7"	""	"52.5"	""	"96.4"	""	"91.7"	"88.0"	""	"834"	"26"	"36.000"	"29.000"	"0.11538146661366"	"16"	"0.001951"	"0.01711"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"616.34967"	"1231.69206"	"1231.69178"	"0.23"	"0.00014"	"7/62"	"7"	"62"	"2082235.76049805"	"HCD"	"MS2"	"4.902423"	"79.6"	"100.000"	"71.2712"	"23986"	"23986"	"23964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.8"	""	"101.1"	""	"83.0"	""	"177.0"	"0.4"	"154.4"	"147.1"	""	"829"	"27"	"36.000"	"29.000"	"0.0802646904055869"	"18"	"0.0009352"	"0.008264"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"616.35022"	"1231.69316"	"1231.69178"	"1.13"	"0.00069"	"7/62"	"7"	"62"	"528455.757751465"	"HCD"	"MS2"	"16.1619"	"30.0"	"100.000"	"78.4253"	"26880"	"26880"	"26855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"46.1"	""	"40.6"	""	"53.6"	""	"54.7"	"47.8"	""	"807"	"21"	"36.000"	"29.000"	"0.286314629373228"	"22"	"0.009348"	"0.1215"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"616.35077"	"1231.69426"	"1231.69561"	"-1.10"	"-0.00068"	"9/82"	"9"	"82"	"3630891.83331299"	"HCD"	"MS2"	"100"	"170.4"	"100.000"	"25.8690"	"5620"	"5620"	"5593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.6"	""	"224.9"	""	"247.5"	""	"307.0"	""	"284.3"	"305.3"	""	"800"	"34"	"36.000"	"29.000"	"0.0178673436860385"	"23"	"0"	"0.0001173"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"616.35120"	"1231.69512"	"1231.69561"	"-0.40"	"-0.00025"	"8/82"	"8"	"82"	"4848181.70355225"	"HCD"	"MS2"	"0"	"221.2"	"100.000"	"26.3305"	"5766"	"5766"	"5751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"322.6"	""	"267.9"	""	"327.8"	""	"380.6"	"0.1"	"367.8"	"427.1"	""	"797"	"49"	"36.000"	"29.000"	"0.000547555727042488"	"23"	"0"	"4.838E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"616.35126"	"1231.69524"	"1231.69561"	"-0.31"	"-0.00019"	"7/82"	"7"	"82"	"3306546.61169434"	"HCD"	"MS2"	"0"	"145.1"	"100.000"	"26.1928"	"5750"	"5750"	"5731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.6"	""	"178.0"	""	"216.2"	""	"256.8"	""	"237.2"	"269.4"	""	"793"	"50"	"35.000"	"28.000"	"0.000382158207866905"	"21"	"0"	"3.408E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGASTQAAQR"	"[K].iGASTQAAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"616.35138"	"1231.69548"	"1231.69561"	"-0.11"	"-0.00007"	"7/82"	"7"	"82"	"5387257.14886475"	"HCD"	"MS2"	"28.11276"	"215.7"	"100.000"	"26.0502"	"5654"	"5654"	"5627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"342.8"	""	"295.9"	""	"311.8"	""	"361.0"	""	"343.8"	"387.9"	""	"793"	"48"	"35.000"	"28.000"	"0.000682720889981952"	"25"	"0"	"5.373E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVELPLR"	"[K].emVELPLR.[H]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"616.35193"	"1231.69658"	"1231.69178"	"3.90"	"0.00240"	"7/62"	"7"	"62"	"1880614.67169189"	"HCD"	"MS2"	"7.099552"	"78.7"	"100.000"	"71.0687"	"23872"	"23872"	"23854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.3"	""	"87.6"	""	"97.4"	""	"154.6"	""	"148.9"	"155.3"	""	"998"	"19"	"36.000"	"29.000"	"0.575573175652725"	"23"	"0.002834"	"0.03048"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQMDVIR"	"[R].qLQMDVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"616.35492"	"1231.70256"	"1231.70301"	"-0.36"	"-0.00022"	"6/70"	"6"	"70"	"566964.300964355"	"HCD"	"MS2"	"51.66331"	"40.4"	"100.000"	"70.7714"	"23752"	"23752"	"23727"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"56.9"	""	"62.7"	""	"67.3"	"0.8"	"74.0"	"74.0"	""	"949"	"14"	"36.000"	"29.000"	"1.6952596170309"	"17"	"0.002799"	"0.02956"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQIMDAVIR"	"[K].gQIMDAVIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"616.35492"	"1231.70256"	"1231.70301"	"-0.36"	"-0.00022"	"11/78"	"11"	"78"	"681724.153869629"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"77.4915"	"26502"	"26502"	"26489"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"50.3"	""	"53.6"	""	"43.0"	""	"74.5"	"67.7"	""	"949"	"27"	"36.000"	"29.000"	"0.105011343970787"	"22"	"9.9E-05"	"0.0006465"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQMDVIR"	"[R].qLQMDVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"616.35510"	"1231.70293"	"1231.70301"	"-0.06"	"-0.00004"	"5/70"	"5"	"70"	"870013.364868164"	"HCD"	"MS2"	"15.53163"	"50.7"	"100.000"	"70.9553"	"23858"	"23858"	"23839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.4"	""	"67.3"	""	"63.9"	""	"87.3"	"0.3"	"88.6"	"89.8"	""	"945"	"18"	"36.000"	"29.000"	"0.703723109218407"	"24"	"0.001488"	"0.01203"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVNADK"	"[K].vGAVNADk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"616.37207"	"1231.73686"	"1231.74106"	"-3.40"	"-0.00210"	"7/62"	"7"	"62"	"5156808.34344482"	"HCD"	"MS2"	"0"	"389.3"	"100.000"	"39.0217"	"10904"	"10904"	"10874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"535.8"	""	"434.3"	""	"488.7"	""	"694.2"	""	"763.5"	"781.1"	""	"800"	"39"	"36.000"	"29.000"	"0.00523672769199763"	"28"	"0.0001686"	"0.001797"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVNADK"	"[K].vGAVNADk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"616.37305"	"1231.73882"	"1231.74106"	"-1.82"	"-0.00112"	"7/62"	"7"	"62"	"6070661.5201416"	"HCD"	"MS2"	"0"	"442.6"	"100.000"	"39.1158"	"10906"	"10906"	"10889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"620.4"	""	"485.1"	""	"528.7"	""	"822.2"	""	"840.5"	"906.1"	""	"792"	"35"	"35.000"	"28.000"	"0.0125804213197731"	"25"	"0.0001991"	"0.004041"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNLLGK"	"[K].dNNLLGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"616.37329"	"1231.73931"	"1231.74106"	"-1.42"	"-0.00088"	"10/58"	"10"	"58"	"4204505.37005615"	"HCD"	"MS2"	"10.44504"	"315.7"	"100.000"	"56.4082"	"17921"	"17921"	"17905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"524.1"	""	"379.7"	""	"406.1"	""	"524.9"	""	"578.2"	"582.5"	""	"785"	"30"	"35.000"	"28.000"	"0.0360445544119806"	"27"	"0.002711"	"0.02889"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNLLGK"	"[K].dNNLLGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"616.37335"	"1231.73943"	"1231.74106"	"-1.32"	"-0.00082"	"6/58"	"6"	"58"	"15725906.6704712"	"HCD"	"MS2"	"38.89029"	"760.6"	"74.983"	"55.8134"	"17717"	"17717"	"17705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1315.0"	""	"985.4"	""	"903.9"	""	"1295.0"	"0.3"	"1370.2"	"1330.7"	""	"785"	"24"	"35.000"	"28.000"	"0.169371237654898"	"25"	"0.006267"	"0.07672"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNLLGK"	"[K].dNNLLGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"616.37341"	"1231.73955"	"1231.74106"	"-1.22"	"-0.00075"	"6/58"	"6"	"58"	"14983605.8539429"	"HCD"	"MS2"	"49.57467"	"859.2"	"86.670"	"56.1243"	"17809"	"17809"	"17798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1480.1"	""	"1110.1"	""	"1051.4"	""	"1444.2"	""	"1552.4"	"1506.0"	""	"784"	"24"	"35.000"	"28.000"	"0.14530684293877"	"23"	"0.006237"	"0.07605"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVNADK"	"[K].vGAVNADk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"616.37366"	"1231.74004"	"1231.74106"	"-0.83"	"-0.00051"	"7/62"	"7"	"62"	"3929838.92895508"	"HCD"	"MS2"	"0"	"301.0"	"100.000"	"39.3945"	"11017"	"11017"	"11002"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"370.4"	""	"327.5"	""	"393.2"	""	"529.1"	""	"591.4"	"647.6"	""	"792"	"37"	"35.000"	"28.000"	"0.00763299865623611"	"25"	"0.0001686"	"0.001373"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNLLGK"	"[K].dNNLLGk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"616.37366"	"1231.74004"	"1231.74106"	"-0.83"	"-0.00051"	"6/58"	"6"	"58"	"3131982.40600586"	"HCD"	"MS2"	"5.712461"	"237.2"	"100.000"	"56.1114"	"17835"	"17835"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"380.0"	""	"280.8"	""	"315.0"	""	"385.8"	""	"429.1"	"460.1"	""	"792"	"40"	"35.000"	"28.000"	"0.00419464475170207"	""	"0.001348"	"0.01123"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGAVNADK"	"[K].vGAVNADk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"616.37372"	"1231.74016"	"1231.74106"	"-0.73"	"-0.00045"	"7/62"	"7"	"62"	"4253881.85546875"	"HCD"	"MS2"	"0"	"316.1"	"100.000"	"39.3035"	"11016"	"11016"	"11002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"398.1"	""	"329.8"	""	"416.6"	""	"570.3"	""	"622.0"	"668.2"	""	"792"	"37"	"35.000"	"28.000"	"0.0075804534630835"	"25"	"0.0001991"	"0.002934"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEVMPK"	"[R].aVEVMPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"616.37616"	"1231.74504"	"1231.74845"	"-2.77"	"-0.00170"	"6/48"	"6"	"48"	"4108282.56518555"	"HCD"	"MS2"	"2.712734"	"292.0"	"100.000"	"57.2838"	"18310"	"18310"	"18295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"458.4"	""	"416.2"	""	"427.0"	""	"299.1"	""	"543.9"	"626.3"	""	"827"	"15"	"36.000"	"29.000"	"1.39789809771173"	"24"	"0.00856"	"0.1093"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEVMPK"	"[R].aVEVMPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"616.37634"	"1231.74541"	"1231.74845"	"-2.47"	"-0.00152"	"10/48"	"10"	"48"	"1840544.49810791"	"HCD"	"MS2"	"3.246861"	"139.0"	"100.000"	"57.9027"	"18562"	"18562"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.4"	""	"146.7"	""	"144.2"	""	"169.9"	""	"306.7"	"352.4"	""	"607"	"29"	"34.000"	"27.000"	"0.0388292225811808"	"26"	"0.002189"	"0.02097"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEVMPK"	"[R].aVEVMPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"616.37640"	"1231.74553"	"1231.74845"	"-2.37"	"-0.00146"	"6/48"	"6"	"48"	"1761013.40905762"	"HCD"	"MS2"	"3.3548"	"133.8"	"100.000"	"58.1972"	"18647"	"18647"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"207.1"	""	"146.6"	""	"156.0"	""	"169.7"	""	"252.8"	"338.1"	""	"607"	"34"	"34.000"	"27.000"	"0.011565347740001"	"25"	"0.001103"	"0.009041"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEVMPK"	"[R].aVEVMPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"616.37689"	"1231.74651"	"1231.74845"	"-1.58"	"-0.00097"	"6/48"	"6"	"48"	"2813606.38763428"	"HCD"	"MS2"	"0"	"202.7"	"100.000"	"57.8820"	"18519"	"18519"	"18502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.7"	""	"235.4"	""	"234.1"	""	"213.2"	""	"425.8"	"510.4"	""	"607"	"24"	"34.000"	"27.000"	"0.129765335947006"	"23"	"0.003786"	"0.04062"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEVMPK"	"[R].aVEVMPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"616.37708"	"1231.74687"	"1231.74845"	"-1.28"	"-0.00079"	"6/48"	"6"	"48"	"2853900.55761719"	"HCD"	"MS2"	"0"	"204.8"	"100.000"	"57.5941"	"18436"	"18436"	"18418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.3"	""	"234.4"	""	"228.1"	""	"220.7"	"2.2"	"421.1"	"516.5"	""	"602"	"23"	"34.000"	"27.000"	"0.159428696611389"	"23"	"0.002875"	"0.03091"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVmS.[-]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.81683"	"1232.62639"	"1232.62951"	"-2.53"	"-0.00156"	"7/64"	"7"	"64"	"4157894.21459961"	"HCD"	"MS2"	"5.244413"	"98.2"	"100.000"	"46.4627"	"13918"	"13918"	"13902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.7"	""	"106.0"	""	"100.3"	""	"238.0"	""	"198.3"	"177.1"	""	"552"	"43"	"34.000"	"27.000"	"0.00136429749608366"	"15"	"0.0007633"	"0.007466"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNPVFGVMS"	"[R].hNPVFGVmS.[-]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.81732"	"1232.62737"	"1232.62951"	"-1.74"	"-0.00107"	"7/64"	"7"	"64"	"4169767.41357422"	"HCD"	"MS2"	"11.30573"	"96.8"	"100.000"	"46.7758"	"14008"	"14008"	"13991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.6"	""	"97.1"	""	"111.0"	""	"228.2"	"1.9"	"180.4"	"187.3"	""	"545"	"44"	"34.000"	"27.000"	"0.00107737403968565"	"15"	"0.0001991"	"0.002123"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNPFPK"	"[R].gDNPFPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"616.85480"	"1232.70232"	"1232.70394"	"-1.32"	"-0.00081"	"10/56"	"10"	"56"	"4455081.43066406"	"HCD"	"MS2"	"0"	"306.6"	"100.000"	"53.3522"	"16715"	"16715"	"16700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"495.9"	""	"440.1"	""	"451.7"	""	"450.0"	""	"526.6"	"541.0"	""	"880"	"29"	"36.000"	"29.000"	"0.050751943344128"	"21"	"0.002834"	"0.03068"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNPFPK"	"[R].gDNPFPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"616.85565"	"1232.70403"	"1232.70394"	"0.07"	"0.00004"	"10/56"	"10"	"56"	"4989232.49249268"	"HCD"	"MS2"	"2.287085"	"353.1"	"100.000"	"53.7088"	"16827"	"16827"	"16809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"524.7"	""	"507.0"	""	"510.7"	""	"540.1"	""	"621.0"	"641.2"	""	"884"	"29"	"36.000"	"29.000"	"0.0515729850740946"	"21"	"0.002834"	"0.03034"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEITELRR"	"[K].sEITELRR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"411.57635"	"1232.71451"	"1232.71602"	"-1.22"	"-0.00050"	"4/66"	"4"	"66"	"4167532.70202637"	"HCD"	"MS2"	"56.87215"	"206.9"	"100.000"	"32.6349"	"8276"	"8276"	"8262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.6"	""	"276.8"	""	"273.0"	""	"346.5"	""	"346.7"	"389.0"	""	"810"	"16"	"36.000"	"29.000"	"1.01731400476138"	"20"	"0.006885"	"0.0866"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSQIGAVVSR"	"[K].sSQIGAVVSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O88794"	"Pyridoxine-5'-phosphate oxidase OS=Rattus norvegicus OX=10116 GN=Pnpo PE=1 SV=1"	"O88794"	"Pyridoxine-5'-phosphate oxidase OS=Rattus norvegicus OX=10116 GN=Pnpo PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"616.86115"	"1232.71501"	"1232.71602"	"-0.81"	"-0.00050"	"9/102"	"9"	"102"	"2300608.019104"	"HCD"	"MS2"	"6.828007"	"133.4"	"100.000"	"39.8719"	"11243"	"11243"	"11227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.4"	""	"169.5"	""	"172.8"	""	"239.8"	""	"257.3"	"252.1"	""	"812"	"25"	"36.000"	"29.000"	"0.13474914976636"	"21"	"0"	"0.0002435"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEITELRR"	"[K].sEITELRR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"411.57663"	"1232.71534"	"1232.71602"	"-0.55"	"-0.00023"	"4/66"	"4"	"66"	"4249235.02697754"	"HCD"	"MS2"	"66.72308"	"197.4"	"100.000"	"32.5755"	"8289"	"8289"	"8269"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"349.4"	""	"255.5"	""	"277.6"	""	"320.6"	""	"316.9"	"349.0"	""	"812"	"23"	"36.000"	"29.000"	"0.209182829700193"	"20"	"0.002588"	"0.02696"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSQIGAVVSR"	"[K].sSQIGAVVSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O88794"	"Pyridoxine-5'-phosphate oxidase OS=Rattus norvegicus OX=10116 GN=Pnpo PE=1 SV=1"	"O88794"	"Pyridoxine-5'-phosphate oxidase OS=Rattus norvegicus OX=10116 GN=Pnpo PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"616.86133"	"1232.71538"	"1232.71602"	"-0.52"	"-0.00032"	"9/102"	"9"	"102"	"2307083.63684082"	"HCD"	"MS2"	"7.817182"	"138.6"	"100.000"	"39.9309"	"11233"	"11233"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.2"	""	"180.1"	""	"203.7"	""	"242.8"	""	"255.3"	"259.0"	""	"812"	"22"	"36.000"	"29.000"	"0.255579510240022"	"18"	"9.9E-05"	"0.0005308"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEQAAK"	"[K].vEEQAAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"616.86340"	"1232.71953"	"1232.72507"	"-4.50"	"-0.00277"	"6/56"	"6"	"56"	"1452541.97644043"	"HCD"	"MS2"	"40.22738"	"110.8"	"100.000"	"30.9659"	"7645"	"7645"	"7622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.4"	""	"149.9"	""	"100.2"	""	"154.8"	""	"241.0"	"217.4"	""	"745"	"29"	"35.000"	"28.000"	"0.0500179948023854"	"23"	"0.001615"	"0.01389"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLDVAYAR"	"[R].vPLDVAYAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"616.86346"	"1232.71965"	"1232.72004"	"-0.31"	"-0.00019"	"9/64"	"9"	"64"	"851465.659912109"	"HCD"	"MS2"	"16.12265"	"39.8"	"100.000"	"81.6066"	"28145"	"28145"	"28128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.3"	""	"47.7"	""	"61.1"	""	"57.8"	""	"77.0"	"75.4"	""	"740"	"26"	"35.000"	"28.000"	"0.099816359000462"	"17"	"9.9E-05"	"0.0004026"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLDVAYAR"	"[R].vPLDVAYAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"616.86353"	"1232.71977"	"1232.72004"	"-0.21"	"-0.00013"	"9/64"	"9"	"64"	"1008242.40808105"	"HCD"	"MS2"	"15.03905"	"42.7"	"100.000"	"81.6338"	"28185"	"28185"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.3"	""	"58.6"	""	"60.0"	""	"55.6"	""	"72.2"	"90.0"	""	"740"	"26"	"35.000"	"28.000"	"0.0887568180037212"	"16"	"0.0001991"	"0.005065"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLDVAYAR"	"[R].vPLDVAYAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"616.86359"	"1232.71990"	"1232.72004"	"-0.12"	"-0.00007"	"8/64"	"8"	"64"	"2912746.5045166"	"HCD"	"MS2"	"18.747"	"104.3"	"100.000"	"81.3503"	"28070"	"28070"	"28055"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.1"	""	"159.4"	""	"181.4"	""	"127.8"	""	"172.9"	"194.0"	""	"740"	"33"	"35.000"	"28.000"	"0.0186724680098506"	"18"	"9.9E-05"	"0.0004845"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLDVAYAR"	"[R].vPLDVAYAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"616.86365"	"1232.72002"	"1232.72004"	"-0.02"	"-0.00001"	"9/64"	"9"	"64"	"1173514.89007568"	"HCD"	"MS2"	"55.53659"	"67.9"	"100.000"	"81.0691"	"27955"	"27955"	"27945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.7"	""	"98.3"	""	"93.2"	""	"99.7"	""	"127.1"	"131.1"	""	"740"	"14"	"35.000"	"28.000"	"1.47639213873993"	"16"	"0.002373"	"0.02238"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLDVAYAR"	"[R].vPLDVAYAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"616.86365"	"1232.72002"	"1232.72004"	"-0.02"	"-0.00001"	"11/64"	"11"	"64"	"2819721.32739258"	"HCD"	"MS2"	"9.50365"	"104.1"	"100.000"	"81.3136"	"28028"	"28028"	"28014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.4"	""	"150.9"	""	"160.5"	""	"128.8"	"0.8"	"187.0"	"207.2"	""	"740"	"31"	"35.000"	"28.000"	"0.0300055591405921"	"18"	"0"	"0.0003844"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLDVAYAR"	"[R].vPLDVAYAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"616.86377"	"1232.72026"	"1232.72004"	"0.18"	"0.00011"	"9/64"	"9"	"64"	"1269107.37194824"	"HCD"	"MS2"	"45.38083"	"68.8"	"100.000"	"81.0299"	"27912"	"27912"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.7"	""	"96.7"	""	"97.6"	""	"88.7"	""	"127.1"	"145.8"	""	"740"	"18"	"35.000"	"28.000"	"0.605622112928289"	"14"	"0.0009352"	"0.008273"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYPAVEGR"	"[K].vIYPAVEGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"616.86407"	"1232.72087"	"1232.72004"	"0.68"	"0.00042"	"5/64"	"5"	"64"	"1550359.0246582"	"HCD"	"MS2"	"28.67554"	"91.5"	"100.000"	"62.1967"	"20304"	"20304"	"20281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.3"	""	"77.9"	""	"84.3"	""	"175.8"	"0.1"	"213.2"	"225.2"	""	"743"	"21"	"35.000"	"28.000"	"0.267891428516447"	""	"0.0001686"	"0.001506"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEQAAK"	"[K].vEEQAAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"P08650"	"Complement C5 (Fragment) OS=Rattus norvegicus OX=10116 GN=C5 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"616.86426"	"1232.72124"	"1232.72507"	"-3.11"	"-0.00192"	"6/56"	"6"	"56"	"1482747.27624512"	"HCD"	"MS2"	"21.0072"	"112.5"	"100.000"	"31.1067"	"7664"	"7664"	"7636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.6"	""	"151.5"	""	"113.2"	""	"152.6"	""	"255.5"	"216.2"	""	"742"	"32"	"35.000"	"28.000"	"0.0238986797506131"	"25"	"0.00192"	"0.01621"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQDEK"	"[K].aALQDEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"616.86560"	"1232.72392"	"1232.72507"	"-0.93"	"-0.00057"	"12/56"	"12"	"56"	"1963658.52813721"	"HCD"	"MS2"	"0"	"161.6"	"100.000"	"37.4305"	"10257"	"10257"	"10229"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.3"	""	"137.7"	""	"155.3"	""	"321.0"	""	"403.6"	"366.9"	""	"733"	"38"	"35.000"	"28.000"	"0.00590301625292836"	""	"0.000885"	"0.00774"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQDEK"	"[K].aALQDEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"616.86591"	"1232.72453"	"1232.72507"	"-0.44"	"-0.00027"	"6/56"	"6"	"56"	"438410.725341797"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"37.9672"	"10437"	"10437"	"10410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.6"	""	"40.3"	""	"58.4"	""	"74.3"	"1.6"	"102.0"	"110.5"	""	"719"	"29"	"35.000"	"28.000"	"0.0430228221004954"	""	"0.000885"	"0.007721"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LGEQEAK"	"[R].lGEQEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"616.86603"	"1232.72478"	"1232.72507"	"-0.24"	"-0.00015"	"10/58"	"10"	"58"	"970659.820922852"	"HCD"	"MS2"	"16.46609"	"91.9"	"100.000"	"36.2319"	"9772"	"9772"	"9754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.1"	""	"104.2"	""	"123.8"	""	"140.9"	"3.3"	"177.8"	"187.5"	""	"717"	"9"	"35.000"	"28.000"	"4.80274092442198"	"21"	"0.004672"	"0.05496"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQDEK"	"[K].aALQDEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"616.86646"	"1232.72563"	"1232.72507"	"0.45"	"0.00028"	"12/56"	"12"	"56"	"1022336.25280762"	"HCD"	"MS2"	"0"	"88.4"	"100.000"	"37.7556"	"10386"	"10386"	"10362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.2"	""	"83.9"	""	"86.8"	""	"169.4"	""	"217.9"	"211.5"	""	"718"	"36"	"35.000"	"28.000"	"0.00851323160332534"	""	"0.0001991"	"0.004055"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALQDEK"	"[K].aALQDEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"P15129"	"Cytochrome P450 4B1 OS=Rattus norvegicus OX=10116 GN=Cyp4b1 PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"616.86658"	"1232.72588"	"1232.72507"	"0.65"	"0.00040"	"12/56"	"12"	"56"	"2628633.78710938"	"HCD"	"MS2"	"10.80173"	"213.8"	"100.000"	"37.6138"	"10294"	"10294"	"10273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.4"	""	"176.7"	""	"199.7"	""	"402.9"	""	"534.9"	"522.4"	""	"715"	"35"	"35.000"	"28.000"	"0.0120858178943638"	""	"0.001951"	"0.01687"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTTVTEIAG"	"[K].lVTTVTEIAG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"616.86859"	"1232.72991"	"1232.72993"	"-0.02"	"-0.00001"	"7/82"	"7"	"82"	"2116862.31195068"	"HCD"	"MS2"	"18.75427"	"24.7"	"100.000"	"111.8120"	"40257"	"40257"	"40236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"32.4"	""	"38.0"	""	"46.4"	""	"39.0"	"41.8"	""	"597"	"54"	"34.000"	"27.000"	"0.000111158924316989"	"25"	"0.0001991"	"0.002321"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTTVTEIAG"	"[K].lVTTVTEIAG.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"616.86871"	"1232.73015"	"1232.72993"	"0.17"	"0.00011"	"7/82"	"7"	"82"	"2817425.29980469"	"HCD"	"MS2"	"15.93204"	"27.6"	"100.000"	"111.7218"	"40207"	"40207"	"40183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.9"	""	"36.0"	""	"42.0"	""	"47.0"	""	"46.8"	"48.8"	""	"597"	"57"	"34.000"	"27.000"	"5.9558580101821E-05"	"24"	"0.0001686"	"0.00181"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVELQGK"	"[K].tVELQGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"616.88348"	"1232.75969"	"1232.76146"	"-1.43"	"-0.00088"	"6/56"	"6"	"56"	"3776389.86175537"	"HCD"	"MS2"	"57.17507"	"259.4"	"100.000"	"47.5724"	"14369"	"14369"	"14347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"326.2"	""	"331.3"	""	"344.9"	""	"493.0"	""	"494.1"	"471.7"	""	"491"	"19"	"33.000"	"26.000"	"0.295836323361276"	"15"	"0.002588"	"0.02725"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGILK"	"[K].tNEGILk.[TL]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4; Q6W3B0"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1; Desmoglein-4 OS=Rattus norvegicus OX=10116 GN=Dsg4 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"616.88354"	"1232.75981"	"1232.76146"	"-1.33"	"-0.00082"	"6/62"	"6"	"62"	"3101500.87182617"	"HCD"	"MS2"	"0"	"237.8"	"100.000"	"48.2952"	"14626"	"14626"	"14605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"313.8"	""	"330.9"	""	"341.7"	""	"412.2"	""	"420.3"	"436.8"	""	"491"	"32"	"33.000"	"26.000"	"0.0144894365182188"	"25"	"0.002035"	"0.01787"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGILK"	"[K].tNEGILk.[TL]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4; Q6W3B0"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1; Desmoglein-4 OS=Rattus norvegicus OX=10116 GN=Dsg4 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"616.88354"	"1232.75981"	"1232.76146"	"-1.33"	"-0.00082"	"6/62"	"6"	"62"	"3873579.06585693"	"HCD"	"MS2"	"0"	"290.4"	"100.000"	"48.0484"	"14563"	"14563"	"14545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"409.9"	""	"402.9"	""	"414.9"	""	"451.6"	""	"509.6"	"566.9"	""	"491"	"32"	"33.000"	"26.000"	"0.0139011745458891"	"25"	"0.002189"	"0.02083"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVELQGK"	"[K].tVELQGk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"616.88373"	"1232.76018"	"1232.76146"	"-1.04"	"-0.00064"	"6/56"	"6"	"56"	"3887624.54150391"	"HCD"	"MS2"	"49.40006"	"283.7"	"100.000"	"47.8810"	"14457"	"14457"	"14438"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"374.1"	""	"331.4"	""	"362.0"	""	"575.3"	""	"528.4"	"517.4"	""	"486"	"19"	"33.000"	"26.000"	"0.322556853228327"	"17"	"0.003001"	"0.03229"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALQLSK"	"[K].dALQLSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"616.88385"	"1232.76042"	"1232.76146"	"-0.84"	"-0.00052"	"6/64"	"6"	"64"	"1293232.26489258"	"HCD"	"MS2"	"22.16234"	"94.1"	"100.000"	"62.8531"	"20571"	"20571"	"20548"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.3"	""	"75.5"	""	"69.9"	""	"187.8"	""	"248.6"	"236.0"	""	"488"	"34"	"33.000"	"26.000"	"0.0104325344220987"	"25"	"0.0007053"	"0.007234"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P63018; P48721"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"616.88391"	"1232.76055"	"1232.76146"	"-0.74"	"-0.00046"	"4/68"	"4"	"68"	"9649142.68981934"	"HCD"	"MS2"	"4.089161"	"591.8"	"100.000"	"42.4192"	"12241"	"12241"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"971.8"	""	"819.7"	""	"774.2"	""	"979.7"	""	"945.0"	"1114.9"	""	"488"	"21"	"33.000"	"26.000"	"0.195609447466593"	"22"	"0.006267"	"0.0771"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P63018; P48721"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"411.59171"	"1232.76056"	"1232.76146"	"-0.73"	"-0.00030"	"7/68"	"7"	"68"	"4188257.99255371"	"HCD"	"MS2"	"21.68626"	"197.9"	"100.000"	"42.1522"	"12166"	"12166"	"12145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.6"	""	"272.6"	""	"286.5"	""	"295.0"	""	"366.5"	"370.3"	""	"488"	"18"	"33.000"	"26.000"	"0.422075191648484"	"21"	"0.00981"	"0.1318"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P63018; P48721"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"411.59171"	"1232.76056"	"1232.76146"	"-0.73"	"-0.00030"	"7/68"	"7"	"68"	"3629502.96496582"	"HCD"	"MS2"	"42.62637"	"177.2"	"100.000"	"42.2214"	"12160"	"12160"	"12136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.5"	""	"234.0"	""	"272.1"	""	"279.5"	"2.3"	"316.8"	"317.1"	""	"488"	"18"	"33.000"	"26.000"	"0.355950679507185"	"21"	"0.003818"	"0.04146"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALQLSK"	"[K].dALQLSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"616.88397"	"1232.76067"	"1232.76146"	"-0.64"	"-0.00040"	"6/64"	"6"	"64"	"1257734.4765625"	"HCD"	"MS2"	"20.1924"	"92.2"	"100.000"	"62.8962"	"20556"	"20556"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.9"	""	"73.7"	""	"65.2"	""	"195.8"	"0.3"	"236.7"	"231.3"	""	"488"	"33"	"33.000"	"26.000"	"0.0109746284593962"	"25"	"0.0005778"	"0.007134"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNEGILK"	"[K].tNEGILk.[TL]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9R0T4"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1"	"Q9R0T4; Q6W3B0"	"Cadherin-1 OS=Rattus norvegicus OX=10116 GN=Cdh1 PE=1 SV=1; Desmoglein-4 OS=Rattus norvegicus OX=10116 GN=Dsg4 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"616.88409"	"1232.76091"	"1232.76146"	"-0.44"	"-0.00027"	"6/62"	"6"	"62"	"1987820.10620117"	"HCD"	"MS2"	"27.99936"	"170.2"	"100.000"	"48.6164"	"14757"	"14757"	"14740"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.0"	""	"249.8"	""	"235.2"	""	"240.8"	""	"350.3"	"331.3"	""	"480"	"19"	"33.000"	"26.000"	"0.304236447805883"	"25"	"0.004234"	"0.04911"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P63018; P48721"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"616.88409"	"1232.76091"	"1232.76146"	"-0.44"	"-0.00027"	"5/68"	"5"	"68"	"6484373.15093994"	"HCD"	"MS2"	"25.11821"	"384.8"	"100.000"	"41.9957"	"12102"	"12102"	"12081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"560.3"	""	"525.4"	""	"512.6"	""	"639.9"	""	"701.6"	"709.3"	""	"480"	"26"	"33.000"	"26.000"	"0.0594581293831988"	"25"	"0.002035"	"0.01827"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTIPTK"	"[R].nTTIPTk.[QK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"3"	"P63018; P48721"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P63018; P48721; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"616.88422"	"1232.76116"	"1232.76146"	"-0.25"	"-0.00015"	"5/68"	"5"	"68"	"5915707.98480225"	"HCD"	"MS2"	"25.66093"	"348.0"	"100.000"	"42.1342"	"12124"	"12124"	"12104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"522.5"	""	"447.3"	""	"464.2"	""	"575.0"	"0.5"	"612.5"	"674.3"	""	"444"	"27"	"33.000"	"26.000"	"0.0402117500561552"	"26"	"0.002673"	"0.02817"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALQLSK"	"[K].dALQLSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"616.88458"	"1232.76189"	"1232.76146"	"0.35"	"0.00021"	"9/64"	"9"	"64"	"948986.13684082"	"HCD"	"MS2"	"36.39484"	"87.5"	"100.000"	"63.2301"	"20692"	"20692"	"20668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.3"	""	"97.0"	""	"83.5"	""	"171.3"	""	"187.7"	"196.0"	""	"444"	"24"	"33.000"	"26.000"	"0.0964612697660889"	"21"	"0.001615"	"0.0144"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSTYYR"	"[R].tITSTYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"617.33655"	"1233.66582"	"1233.66767"	"-1.50"	"-0.00092"	"6/64"	"6"	"64"	"7159917.76361084"	"HCD"	"MS2"	"45.63421"	"401.5"	"100.000"	"44.8474"	"13230"	"13230"	"13210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"611.4"	""	"513.2"	""	"495.9"	""	"674.2"	""	"745.8"	"766.1"	""	"821"	"14"	"36.000"	"29.000"	"1.50076661957188"	"20"	"0.004234"	"0.04957"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TITSTYYR"	"[R].tITSTYYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"617.33673"	"1233.66619"	"1233.66767"	"-1.20"	"-0.00074"	"6/64"	"6"	"64"	"7726200.55743408"	"HCD"	"MS2"	"43.34909"	"418.4"	"100.000"	"44.6369"	"13178"	"13178"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"639.1"	""	"527.8"	""	"544.3"	""	"669.9"	""	"783.1"	"801.8"	""	"821"	"13"	"36.000"	"29.000"	"1.98295638237327"	"19"	"0.004792"	"0.05651"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSVLQWR"	"[K].dTSVLQWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.34192"	"1233.67656"	"1233.67890"	"-1.90"	"-0.00117"	"6/64"	"6"	"64"	"1094482.93811035"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"77.5534"	"26527"	"26527"	"26508"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"89.9"	""	"88.5"	""	"87.5"	"1.3"	"110.0"	"106.9"	""	"877"	"21"	"36.000"	"29.000"	"0.370654773602787"	"21"	"0.0005161"	"0.006819"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSVLQWR"	"[K].dTSVLQWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"617.34204"	"1233.67681"	"1233.67890"	"-1.70"	"-0.00105"	"6/64"	"6"	"64"	"1081170.19274902"	"HCD"	"MS2"	"28.73088"	"61.9"	"100.000"	"77.4773"	"26468"	"26468"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.9"	""	"87.0"	""	"81.3"	""	"94.5"	"0.0"	"108.7"	"101.5"	""	"873"	"28"	"36.000"	"29.000"	"0.0679178998195615"	"23"	"0.0001991"	"0.003182"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSVLQWR"	"[K].dTSVLQWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"617.34216"	"1233.67705"	"1233.67890"	"-1.50"	"-0.00093"	"5/64"	"5"	"64"	"382844.900268555"	"HCD"	"MS2"	"11.93469"	"28.2"	"100.000"	"78.1558"	"26770"	"26770"	"26751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"36.0"	""	"37.5"	""	"42.8"	""	"59.4"	"51.1"	""	"839"	"18"	"36.000"	"29.000"	"0.730687983387783"	"24"	"0.002588"	"0.0269"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSVLQWR"	"[K].dTSVLQWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"617.34216"	"1233.67705"	"1233.67890"	"-1.50"	"-0.00093"	"6/64"	"6"	"64"	"1904993.13879395"	"HCD"	"MS2"	"0"	"96.0"	"100.000"	"77.7642"	"26584"	"26584"	"26565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.6"	""	"115.9"	""	"142.3"	""	"142.8"	"1.8"	"185.5"	"160.9"	""	"839"	"32"	"36.000"	"29.000"	"0.0255700728392251"	"21"	"0.0001991"	"0.005145"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSVLQWR"	"[K].dTSVLQWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"617.34235"	"1233.67742"	"1233.67890"	"-1.20"	"-0.00074"	"6/64"	"6"	"64"	"457693.684448242"	"HCD"	"MS2"	"7.494053"	"29.2"	"100.000"	"78.0547"	"26702"	"26702"	"26682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.4"	""	"32.7"	""	"41.7"	""	"51.0"	""	"49.1"	"63.8"	""	"816"	"23"	"36.000"	"29.000"	"0.227855839452627"	"22"	"0.001348"	"0.01091"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLNEMNR"	"[K].lVLNEmNR.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"617.34241"	"1233.67754"	"1233.68227"	"-3.84"	"-0.00237"	"6/64"	"6"	"64"	"2967448.90008545"	"HCD"	"MS2"	"19.71292"	"149.5"	"100.000"	"46.3184"	"13829"	"13829"	"13818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.0"	""	"122.8"	""	"132.0"	""	"360.4"	""	"328.8"	"319.2"	""	"816"	"29"	"36.000"	"29.000"	"0.0563196779957977"	"21"	"0.003317"	"0.03692"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVLNEMNR"	"[K].lVLNEmNR.[L]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"617.34277"	"1233.67827"	"1233.68227"	"-3.24"	"-0.00200"	"6/64"	"6"	"64"	"3102406.91516113"	"HCD"	"MS2"	"0"	"148.8"	"100.000"	"46.0410"	"13751"	"13751"	"13733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.1"	""	"109.3"	""	"121.7"	""	"380.7"	""	"327.8"	"331.0"	""	"816"	"26"	"36.000"	"29.000"	"0.0983241414904131"	"21"	"0.002035"	"0.01835"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTSVLQWR"	"[K].dTSVLQWR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"617.34314"	"1233.67900"	"1233.67890"	"0.08"	"0.00005"	"6/64"	"6"	"64"	"1924947.35180664"	"HCD"	"MS2"	"4.622797"	"95.7"	"100.000"	"77.8474"	"26645"	"26645"	"26628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.7"	""	"121.5"	""	"144.0"	""	"143.2"	"0.1"	"165.0"	"178.0"	""	"800"	"31"	"36.000"	"29.000"	"0.0346784750303287"	"21"	"0.0001991"	"0.004133"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGSVDFPR"	"[K].nLGSVDFPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"617.34326"	"1233.67925"	"1233.67890"	"0.28"	"0.00017"	"6/84"	"6"	"84"	"706580.232543945"	"HCD"	"MS2"	"30.30985"	"41.9"	"100.000"	"75.9154"	"25870"	"25870"	"25849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.9"	""	"49.0"	""	"56.2"	""	"61.0"	""	"73.5"	"96.8"	""	"795"	"36"	"35.000"	"29.000"	"0.010847686686662"	"20"	"0.0001686"	"0.001388"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGSVDFPR"	"[K].nLGSVDFPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"617.34326"	"1233.67925"	"1233.67890"	"0.28"	"0.00017"	"7/84"	"7"	"84"	"934578.133178711"	"HCD"	"MS2"	"12.85375"	"53.5"	"100.000"	"75.7252"	"25761"	"25761"	"25743"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.5"	""	"61.9"	""	"69.6"	""	"90.6"	"1.5"	"94.5"	"114.8"	""	"795"	"44"	"35.000"	"29.000"	"0.00156796777574923"	"24"	"0"	"0.0002414"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGSVDFPR"	"[K].nLGSVDFPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"617.34363"	"1233.67998"	"1233.67890"	"0.87"	"0.00054"	"7/84"	"7"	"84"	"1058070.79968262"	"HCD"	"MS2"	"11.00007"	"55.1"	"100.000"	"75.6231"	"25751"	"25751"	"25729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.1"	""	"63.1"	""	"71.2"	""	"90.6"	""	"108.0"	"120.8"	""	"824"	"39"	"36.000"	"29.000"	"0.00557053896036043"	"18"	"0.0001686"	"0.001059"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLGSVDFPR"	"[K].nLGSVDFPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"Q5M876"	"N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) OS=Rattus norvegicus OX=10116 GN=Acy3 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"617.34393"	"1233.68059"	"1233.67890"	"1.37"	"0.00084"	"7/84"	"7"	"84"	"706837.987854004"	"HCD"	"MS2"	"12.01002"	"42.4"	"100.000"	"75.4329"	"25643"	"25643"	"25615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.3"	""	"55.3"	""	"59.8"	""	"72.1"	"1.2"	"73.3"	"83.5"	""	"828"	"52"	"36.000"	"29.000"	"0.00026915369180204"	"24"	"0"	"0.0001247"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"617.34515"	"1233.68303"	"1233.68394"	"-0.73"	"-0.00045"	"7/76"	"7"	"76"	"3369615.03717041"	"HCD"	"MS2"	"0"	"266.3"	"100.000"	"23.7028"	"4743"	"4743"	"4724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"430.3"	""	"293.4"	""	"364.6"	""	"423.3"	""	"503.2"	"514.8"	""	"869"	"29"	"36.000"	"29.000"	"0.0609522554632171"	"21"	"0.0001991"	"0.004529"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANSPDGK"	"[K].sANSPDGk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"617.34521"	"1233.68315"	"1233.68394"	"-0.64"	"-0.00039"	"7/76"	"7"	"76"	"3374824.04394531"	"HCD"	"MS2"	"0"	"271.3"	"100.000"	"23.8207"	"4754"	"4754"	"4727"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"425.1"	""	"315.1"	""	"367.9"	""	"425.7"	""	"512.5"	"528.7"	""	"869"	"26"	"36.000"	"29.000"	"0.107643988404166"	"22"	"0.0001991"	"0.005286"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVGEEK"	"[K].vDVGEEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.35773"	"1233.70818"	"1233.70909"	"-0.74"	"-0.00046"	"12/56"	"12"	"56"	"8726198.31665039"	"HCD"	"MS2"	"0"	"582.7"	"100.000"	"43.5918"	"12719"	"12719"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1036.9"	""	"597.4"	""	"812.6"	""	"924.1"	""	"1006.8"	"1142.3"	""	"797"	"39"	"36.000"	"29.000"	"0.00506323780925604"	"28"	"0.001951"	"0.0167"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVGEEK"	"[K].vDVGEEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"P01041"	"Cystatin-B OS=Rattus norvegicus OX=10116 GN=Cstb PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"617.35803"	"1233.70879"	"1233.70909"	"-0.24"	"-0.00015"	"6/56"	"6"	"56"	"8802334.40014648"	"HCD"	"MS2"	"0"	"609.7"	"100.000"	"43.4240"	"12685"	"12685"	"12667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1076.1"	""	"638.5"	""	"826.7"	""	"1002.1"	"1.1"	"1077.1"	"1149.9"	""	"777"	"34"	"35.000"	"28.000"	"0.016120964556345"	"25"	"0.00296"	"0.03175"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"617.36139"	"1233.71550"	"1233.72032"	"-3.91"	"-0.00241"	"6/66"	"6"	"66"	"762630.11895752"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"30.7892"	"7574"	"7574"	"7559"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.1"	""	"74.9"	"2.4"	"92.5"	""	"93.6"	""	"148.0"	"118.7"	""	"682"	"22"	"35.000"	"28.000"	"0.235371773109522"	"27"	"0.002559"	"0.02572"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"617.36261"	"1233.71794"	"1233.72032"	"-1.93"	"-0.00119"	"6/66"	"6"	"66"	"2758673.86120605"	"HCD"	"MS2"	"13.30813"	"222.4"	"100.000"	"30.6367"	"7478"	"7478"	"7465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.2"	""	"314.9"	""	"364.4"	""	"361.3"	""	"343.2"	"354.3"	""	"704"	"34"	"35.000"	"28.000"	"0.0141430365418827"	""	"0.001615"	"0.01329"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"617.36273"	"1233.71819"	"1233.72032"	"-1.73"	"-0.00107"	"6/66"	"6"	"66"	"626894.964294434"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"30.9643"	"7606"	"7606"	"7590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.4"	""	"64.8"	""	"75.8"	""	"76.8"	""	"132.3"	"102.2"	""	"689"	"15"	"35.000"	"28.000"	"1.21112571761999"	"26"	"0.003904"	"0.04222"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"617.36310"	"1233.71892"	"1233.72032"	"-1.14"	"-0.00070"	"6/66"	"6"	"66"	"2781911.79907227"	"HCD"	"MS2"	"15.70838"	"208.8"	"100.000"	"30.5027"	"7464"	"7464"	"7455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"345.3"	""	"299.8"	""	"355.2"	""	"326.9"	""	"332.0"	"316.7"	""	"689"	"30"	"35.000"	"28.000"	"0.0332804527811991"	""	"0.002189"	"0.02138"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"617.36334"	"1233.71941"	"1233.72032"	"-0.74"	"-0.00046"	"6/66"	"6"	"66"	"2562807.89343262"	"HCD"	"MS2"	"17.13763"	"217.9"	"100.000"	"30.3592"	"7367"	"7367"	"7346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"333.9"	""	"306.0"	""	"292.5"	""	"385.7"	"1.5"	"387.8"	"354.5"	""	"734"	"33"	"35.000"	"28.000"	"0.0177691258903364"	""	"0.001488"	"0.01218"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SINNAEK"	"[K].sINNAEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"P62246"	"40S ribosomal protein S15a OS=Rattus norvegicus OX=10116 GN=Rps15a PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"617.36383"	"1233.72038"	"1233.72032"	"0.05"	"0.00003"	"6/66"	"6"	"66"	"2879155.87683105"	"HCD"	"MS2"	"18.43794"	"225.8"	"100.000"	"30.2252"	"7353"	"7353"	"7329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"352.5"	""	"308.4"	""	"323.1"	""	"403.3"	""	"381.9"	"371.3"	""	"707"	"30"	"35.000"	"28.000"	"0.0326128999499209"	""	"0.002328"	"0.02197"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.36432"	"1233.72136"	"1233.72434"	"-2.42"	"-0.00149"	"6/48"	"6"	"48"	"2350565.7520752"	"HCD"	"MS2"	"27.01474"	"172.4"	"100.000"	"45.5606"	"13555"	"13555"	"13528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.8"	""	"210.2"	""	"218.7"	""	"278.7"	""	"323.3"	"326.6"	""	"774"	"24"	"35.000"	"28.000"	"0.168155456754398"	"22"	"0.002559"	"0.02572"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"617.36475"	"1233.72222"	"1233.72434"	"-1.73"	"-0.00106"	"6/48"	"6"	"48"	"2602139.54486084"	"HCD"	"MS2"	"22.35157"	"183.2"	"100.000"	"45.7482"	"13597"	"13597"	"13573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"313.0"	""	"232.4"	""	"258.1"	""	"291.1"	"0.1"	"336.6"	"302.9"	""	"766"	"24"	"35.000"	"28.000"	"0.160767690868556"	"27"	"0.005469"	"0.06941"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"617.36505"	"1233.72283"	"1233.72434"	"-1.23"	"-0.00076"	"10/48"	"10"	"48"	"2081104.24865723"	"HCD"	"MS2"	"25.81968"	"169.4"	"100.000"	"46.0633"	"13726"	"13726"	"13700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.0"	""	"212.7"	""	"210.6"	""	"277.4"	""	"319.4"	"330.3"	""	"766"	"19"	"35.000"	"28.000"	"0.528687173342905"	"22"	"0.007989"	"0.1015"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"411.91248"	"1233.72287"	"1233.72434"	"-1.19"	"-0.00049"	"6/48"	"6"	"48"	"1591461.59991455"	"HCD"	"MS2"	"38.80564"	"87.1"	"100.000"	"44.6573"	"13187"	"13187"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.0"	""	"106.7"	""	"108.2"	""	"139.8"	""	"156.6"	"163.9"	""	"766"	"16"	"35.000"	"28.000"	"0.998156809649577"	"22"	"0.00329"	"0.03528"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"617.36523"	"1233.72319"	"1233.72434"	"-0.93"	"-0.00058"	"9/48"	"9"	"48"	"4158585.8918457"	"HCD"	"MS2"	"49.82929"	"246.9"	"100.000"	"45.1434"	"13350"	"13350"	"13330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"401.7"	""	"302.0"	""	"309.9"	""	"393.9"	""	"452.1"	"481.2"	""	"760"	"17"	"35.000"	"28.000"	"0.746076905197698"	"20"	"0.005266"	"0.06711"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"411.91260"	"1233.72324"	"1233.72434"	"-0.90"	"-0.00037"	"5/48"	"5"	"48"	"1479385.89660645"	"HCD"	"MS2"	"28.44636"	"67.8"	"100.000"	"45.1878"	"13403"	"13403"	"13376"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.8"	""	"83.3"	""	"84.3"	""	"108.4"	""	"136.1"	"123.5"	""	"760"	"11"	"35.000"	"28.000"	"2.82347272400746"	"20"	"0.004234"	"0.04964"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"617.36548"	"1233.72368"	"1233.72434"	"-0.54"	"-0.00033"	"6/48"	"6"	"48"	"2769235.32281494"	"HCD"	"MS2"	"4.291401"	"169.7"	"100.000"	"45.4399"	"13471"	"13471"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"312.9"	""	"195.6"	""	"208.7"	""	"267.5"	"4.9"	"317.0"	"300.5"	""	"757"	"28"	"35.000"	"28.000"	"0.0601264944344259"	"24"	"0.002755"	"0.0293"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.36566"	"1233.72405"	"1233.72434"	"-0.24"	"-0.00015"	"4/48"	"4"	"48"	"3034907.06182861"	"HCD"	"MS2"	"9.311294"	"198.9"	"100.000"	"45.2362"	"13422"	"13422"	"13404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"358.8"	""	"251.0"	""	"237.5"	""	"305.0"	"1.0"	"359.9"	"370.3"	""	"759"	"21"	"35.000"	"28.000"	"0.27366028834991"	"21"	"0.008135"	"0.1026"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYVPPK"	"[K].dGYVPPk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"411.91296"	"1233.72434"	"1233.72434"	"-0.01"	"0.00000"	"6/48"	"6"	"48"	"1427326.29534912"	"HCD"	"MS2"	"16.30204"	"78.4"	"100.000"	"44.9205"	"13260"	"13260"	"13240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.8"	""	"95.4"	""	"86.7"	""	"121.4"	"3.2"	"150.0"	"144.9"	""	"759"	"14"	"35.000"	"28.000"	"1.38743223417181"	"20"	"0.006157"	"0.07514"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"617.36652"	"1233.72576"	"1233.72772"	"-1.59"	"-0.00098"	"6/54"	"6"	"54"	"1878285.74829102"	"HCD"	"MS2"	"45.4579"	"146.0"	"100.000"	"58.7242"	"18862"	"18862"	"18842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.0"	""	"195.9"	""	"197.4"	""	"223.4"	""	"274.6"	"284.3"	""	"647"	"23"	"35.000"	"28.000"	"0.176146608194523"	"25"	"0.002328"	"0.02229"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"617.36658"	"1233.72588"	"1233.72772"	"-1.49"	"-0.00092"	"6/54"	"6"	"54"	"1717426.80297852"	"HCD"	"MS2"	"44.27981"	"139.5"	"100.000"	"58.4456"	"18784"	"18784"	"18763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.9"	""	"179.0"	""	"191.6"	""	"217.7"	""	"273.1"	"282.8"	""	"647"	"19"	"35.000"	"28.000"	"0.374002310349144"	"20"	"0.002525"	"0.02383"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"617.36694"	"1233.72661"	"1233.72772"	"-0.90"	"-0.00055"	"6/54"	"6"	"54"	"2428361.18499756"	"HCD"	"MS2"	"10.94474"	"180.0"	"100.000"	"59.3089"	"19100"	"19100"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.9"	""	"238.6"	""	"255.8"	""	"255.7"	""	"349.7"	"369.0"	""	"647"	"26"	"35.000"	"28.000"	"0.0848934698784868"	"28"	"0.001951"	"0.01667"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"411.91379"	"1233.72681"	"1233.72772"	"-0.73"	"-0.00030"	"5/54"	"5"	"54"	"728967.42199707"	"HCD"	"MS2"	"26.09503"	"41.7"	"100.000"	"59.1340"	"19029"	"19029"	"19006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"51.7"	""	"59.4"	""	"67.6"	""	"83.0"	"80.9"	""	"647"	"26"	"35.000"	"28.000"	"0.0739391212891952"	"24"	"0.001453"	"0.01181"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"617.36713"	"1233.72698"	"1233.72772"	"-0.60"	"-0.00037"	"6/54"	"6"	"54"	"3078877.90997314"	"HCD"	"MS2"	"5.235987"	"214.4"	"100.000"	"59.0489"	"19030"	"19030"	"19014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"294.8"	""	"282.5"	""	"315.2"	""	"304.0"	""	"389.0"	"449.3"	""	"666"	"24"	"35.000"	"28.000"	"0.14205097976093"	"23"	"0.002588"	"0.02646"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"617.36713"	"1233.72698"	"1233.72772"	"-0.60"	"-0.00037"	"6/54"	"6"	"54"	"5503864.40911865"	"HCD"	"MS2"	"9.036625"	"392.5"	"100.000"	"58.7381"	"18904"	"18904"	"18887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"564.0"	""	"529.1"	""	"544.5"	""	"573.0"	""	"732.0"	"780.2"	""	"666"	"24"	"35.000"	"28.000"	"0.136912857127806"	"27"	"0.002711"	"0.02831"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"617.36755"	"1233.72783"	"1233.72772"	"0.09"	"0.00006"	"6/54"	"6"	"54"	"5908902.15618896"	"HCD"	"MS2"	"7.140687"	"411.9"	"100.000"	"59.0211"	"18983"	"18983"	"18965"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"618.6"	""	"537.2"	""	"556.2"	""	"611.7"	""	"765.4"	"818.4"	""	"681"	"25"	"35.000"	"28.000"	"0.10048867416799"	"28"	"0.002559"	"0.02592"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"617.37512"	"1233.74297"	"1233.74547"	"-2.03"	"-0.00125"	"6/54"	"6"	"54"	"5146124.56176758"	"HCD"	"MS2"	"3.849432"	"359.4"	"100.000"	"50.9455"	"15705"	"15705"	"15685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"540.1"	""	"486.3"	""	"491.4"	""	"611.3"	""	"633.1"	"642.9"	""	"586"	"35"	"34.000"	"27.000"	"0.0103721220937446"	""	"0.00307"	"0.03389"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"617.37524"	"1233.74321"	"1233.74547"	"-1.83"	"-0.00113"	"6/56"	"6"	"56"	"2941788.76538086"	"HCD"	"MS2"	"17.31854"	"215.6"	"100.000"	"63.9310"	"20977"	"20977"	"20958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.0"	""	"292.9"	""	"298.2"	""	"362.1"	"1.4"	"413.0"	"377.7"	""	"589"	"35"	"34.000"	"27.000"	"0.00841560415023922"	"23"	"0.001217"	"0.009461"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEESLK"	"[K].gIEESLk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"617.37531"	"1233.74333"	"1233.74547"	"-1.73"	"-0.00107"	"12/52"	"12"	"52"	"3672282.27087402"	"HCD"	"MS2"	"33.12218"	"277.0"	"100.000"	"55.9111"	"17724"	"17724"	"17709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"348.2"	""	"350.9"	""	"337.4"	""	"482.8"	"0.9"	"557.2"	"551.1"	""	"572"	"34"	"34.000"	"27.000"	"0.0103363220714929"	""	"0.00212"	"0.01905"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIDLTK"	"[K].aDIDLTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"617.37555"	"1233.74382"	"1233.74547"	"-1.34"	"-0.00083"	"12/56"	"12"	"56"	"958069.698120117"	"HCD"	"MS2"	"36.31937"	"79.1"	"100.000"	"66.9440"	"22230"	"22230"	"22203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.5"	""	"105.0"	""	"96.6"	""	"142.7"	"3.0"	"170.2"	"117.1"	""	"572"	"47"	"34.000"	"27.000"	"0.000605851284681071"	""	"0.0001686"	"0.00138"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"411.91946"	"1233.74384"	"1233.74547"	"-1.33"	"-0.00055"	"5/56"	"5"	"56"	"655443.917358398"	"HCD"	"MS2"	"12.98068"	"41.3"	"100.000"	"64.4480"	"21218"	"21218"	"21195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"48.6"	""	"56.0"	""	"63.1"	"0.9"	"88.8"	"89.4"	""	"572"	"29"	"34.000"	"27.000"	"0.0346231066195438"	"25"	"0.001615"	"0.01339"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"411.91946"	"1233.74384"	"1233.74547"	"-1.33"	"-0.00055"	"7/56"	"7"	"56"	"1183560.32556152"	"HCD"	"MS2"	"28.02267"	"67.2"	"100.000"	"64.1473"	"21096"	"21096"	"21081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.4"	""	"89.1"	""	"95.6"	""	"119.2"	""	"119.3"	"137.3"	""	"572"	"22"	"34.000"	"27.000"	"0.191586998293127"	"23"	"0.003317"	"0.03647"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIDLTK"	"[K].aDIDLTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"617.37561"	"1233.74394"	"1233.74547"	"-1.24"	"-0.00077"	"12/56"	"12"	"56"	"942134.334777832"	"HCD"	"MS2"	"10.88889"	"78.3"	"100.000"	"66.9201"	"22188"	"22188"	"22164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.4"	""	"81.9"	""	"92.1"	""	"160.9"	"2.9"	"158.6"	"133.8"	""	"570"	"42"	"34.000"	"27.000"	"0.00182324428112555"	""	"0.0001686"	"0.001772"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDALK"	"[R].sLEDALk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A1L1L2"	"Transmembrane protein 214 OS=Rattus norvegicus OX=10116 GN=Tmem214 PE=2 SV=1"	"A1L1L2"	"Transmembrane protein 214 OS=Rattus norvegicus OX=10116 GN=Tmem214 PE=2 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"617.37567"	"1233.74407"	"1233.74547"	"-1.14"	"-0.00070"	"5/54"	"5"	"54"	"630701.103393555"	"HCD"	"MS2"	"6.578047"	"52.2"	"100.000"	"72.8830"	"24636"	"24636"	"24616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"62.1"	""	"67.0"	""	"97.4"	""	"100.6"	"114.1"	""	"568"	"20"	"34.000"	"27.000"	"0.270594110582717"	"26"	"0.001951"	"0.01724"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"617.37585"	"1233.74443"	"1233.74547"	"-0.84"	"-0.00052"	"6/56"	"6"	"56"	"3304351.27642822"	"HCD"	"MS2"	"40.18541"	"234.0"	"100.000"	"63.9137"	"21002"	"21002"	"20979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"330.2"	""	"305.0"	""	"297.5"	""	"422.1"	""	"448.2"	"416.2"	""	"568"	"34"	"34.000"	"27.000"	"0.0111511161653486"	"20"	"0.001488"	"0.01261"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"617.37585"	"1233.74443"	"1233.74547"	"-0.84"	"-0.00052"	"6/54"	"6"	"54"	"11088008.4589844"	"HCD"	"MS2"	"0.6414501"	"767.9"	"100.000"	"50.8958"	"15719"	"15719"	"15702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1068.4"	""	"985.1"	""	"1111.4"	""	"1310.6"	""	"1328.1"	"1470.7"	""	"568"	"35"	"34.000"	"27.000"	"0.00830459275307507"	""	"0.003043"	"0.03262"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"617.37592"	"1233.74455"	"1233.74547"	"-0.75"	"-0.00046"	"6/54"	"6"	"54"	"11224953.3641357"	"HCD"	"MS2"	"0.5870934"	"600.8"	"72.647"	"51.2306"	"15822"	"15822"	"15805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"812.5"	""	"775.0"	""	"850.3"	""	"1030.7"	""	"1056.8"	"1172.9"	""	"568"	"35"	"34.000"	"27.000"	"0.00851762155392494"	""	"0.00307"	"0.03405"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIDLTK"	"[K].aDIDLTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"617.37598"	"1233.74468"	"1233.74547"	"-0.65"	"-0.00040"	"12/56"	"12"	"56"	"1745235.73596191"	"HCD"	"MS2"	"24.34901"	"125.5"	"100.000"	"67.2619"	"22358"	"22358"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.1"	""	"134.9"	""	"157.4"	""	"223.5"	""	"273.8"	"237.4"	""	"568"	"42"	"34.000"	"27.000"	"0.00185916673435106"	"24"	"0.0005161"	"0.006627"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"617.37598"	"1233.74468"	"1233.74547"	"-0.65"	"-0.00040"	"6/56"	"6"	"56"	"5959078.96661377"	"HCD"	"MS2"	"1.297821"	"432.5"	"100.000"	"64.5146"	"21245"	"21245"	"21227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"508.4"	""	"511.8"	""	"583.3"	""	"712.1"	""	"905.9"	"887.9"	""	"568"	"36"	"34.000"	"27.000"	"0.00721636248376002"	"20"	"0.002286"	"0.0217"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"617.37604"	"1233.74480"	"1233.74547"	"-0.55"	"-0.00034"	"6/56"	"6"	"56"	"18172304.5001831"	"HCD"	"MS2"	"0.6618011"	"952.5"	"71.871"	"64.2000"	"21117"	"21117"	"21104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1256.6"	""	"1174.6"	""	"1274.5"	""	"1616.9"	""	"1868.1"	"1852.3"	""	"554"	"36"	"34.000"	"27.000"	"0.00705471979966057"	"21"	"0.002875"	"0.03124"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"411.91986"	"1233.74503"	"1233.74547"	"-0.36"	"-0.00015"	"8/56"	"8"	"56"	"824565.070007324"	"HCD"	"MS2"	"3.324742"	"49.5"	"100.000"	"64.4355"	"21179"	"21179"	"21168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"58.5"	""	"63.3"	""	"83.9"	"0.2"	"96.3"	"103.8"	""	"529"	"22"	"34.000"	"27.000"	"0.163842164357809"	"23"	"0.001348"	"0.01125"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELK"	"[R].aEVSELk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"617.37616"	"1233.74504"	"1233.74547"	"-0.35"	"-0.00022"	"6/54"	"6"	"54"	"4365224.12811279"	"HCD"	"MS2"	"5.212808"	"319.8"	"100.000"	"50.6013"	"15599"	"15599"	"15583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"464.9"	""	"443.4"	""	"431.2"	""	"548.2"	""	"565.4"	"577.7"	""	"529"	"32"	"34.000"	"27.000"	"0.0151504550195752"	""	"0.002525"	"0.02518"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIDLTK"	"[K].aDIDLTk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"P62271"	"40S ribosomal protein S18 OS=Rattus norvegicus OX=10116 GN=Rps18 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"617.37628"	"1233.74529"	"1233.74547"	"-0.15"	"-0.00009"	"12/56"	"12"	"56"	"1762049.06652832"	"HCD"	"MS2"	"22.07059"	"131.2"	"100.000"	"67.2335"	"22315"	"22315"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.0"	""	"147.7"	""	"166.1"	""	"242.6"	""	"263.8"	"252.6"	""	"529"	"42"	"34.000"	"27.000"	"0.00167658538627457"	""	"0.0001991"	"0.005425"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDALK"	"[R].sLEDALk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A1L1L2"	"Transmembrane protein 214 OS=Rattus norvegicus OX=10116 GN=Tmem214 PE=2 SV=1"	"A1L1L2"	"Transmembrane protein 214 OS=Rattus norvegicus OX=10116 GN=Tmem214 PE=2 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"617.37634"	"1233.74541"	"1233.74547"	"-0.05"	"-0.00003"	"6/54"	"6"	"54"	"577391.934631348"	"HCD"	"MS2"	"9.7195"	"49.6"	"100.000"	"72.8215"	"24582"	"24582"	"24554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.9"	""	"54.4"	""	"61.8"	""	"87.0"	""	"97.5"	"105.9"	""	"529"	"34"	"34.000"	"27.000"	"0.00955929086681776"	""	"0.0001991"	"0.00551"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"617.37634"	"1233.74541"	"1233.74547"	"-0.05"	"-0.00003"	"6/56"	"6"	"56"	"15509990.9934692"	"HCD"	"MS2"	"0.2977571"	"1061.4"	"100.000"	"64.2083"	"21087"	"21087"	"21077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1373.8"	""	"1352.8"	""	"1404.0"	""	"1878.4"	"5.3"	"2012.8"	"2037.5"	""	"529"	"36"	"34.000"	"27.000"	"0.00668999320060005"	"21"	"0.002588"	"0.02715"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"617.37640"	"1233.74553"	"1233.74547"	"0.05"	"0.00003"	"6/56"	"6"	"56"	"8682351.73126221"	"HCD"	"MS2"	"0"	"599.9"	"100.000"	"64.4953"	"21204"	"21204"	"21192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"715.9"	""	"690.2"	""	"782.9"	""	"981.3"	""	"1250.1"	"1285.7"	""	"529"	"33"	"34.000"	"27.000"	"0.0135339845500411"	"20"	"0.001718"	"0.01509"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"411.92004"	"1233.74558"	"1233.74547"	"0.08"	"0.00003"	"7/56"	"7"	"56"	"834397.276855469"	"HCD"	"MS2"	"54.58928"	"48.6"	"100.000"	"64.1602"	"21068"	"21068"	"21060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"60.7"	""	"62.3"	""	"87.6"	""	"96.6"	"99.3"	""	"529"	"20"	"34.000"	"27.000"	"0.290018482879872"	"21"	"0.001615"	"0.01396"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"617.37653"	"1233.74578"	"1233.74547"	"0.24"	"0.00015"	"6/56"	"6"	"56"	"867019.097839355"	"HCD"	"MS2"	"13.72421"	"70.1"	"100.000"	"64.8112"	"21366"	"21366"	"21351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.3"	""	"73.9"	""	"95.6"	""	"118.4"	""	"149.4"	"143.4"	""	"529"	"32"	"34.000"	"27.000"	"0.0170382770728764"	"16"	"0.001827"	"0.01529"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGK"	"[R].tIELDGk.[TKR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"3"	"4"	"Q6NYB7; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P70550; P35280; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"617.37689"	"1233.74651"	"1233.74547"	"0.84"	"0.00052"	"6/56"	"6"	"56"	"958263.881408691"	"HCD"	"MS2"	"10.01502"	"76.2"	"100.000"	"64.8007"	"21328"	"21328"	"21311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.2"	""	"85.0"	""	"98.8"	""	"120.3"	""	"163.4"	"158.9"	""	"528"	"33"	"34.000"	"27.000"	"0.0127821505042202"	"17"	"0.0001991"	"0.005046"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"617.82410"	"1234.64092"	"1234.64179"	"-0.71"	"-0.00044"	"6/64"	"6"	"64"	"6225373.18640137"	"HCD"	"MS2"	"0"	"257.0"	"100.000"	"79.4237"	"27260"	"27260"	"27243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.3"	""	"302.6"	""	"298.8"	""	"413.7"	""	"597.7"	"598.1"	""	"712"	"29"	"35.000"	"28.000"	"0.0448177446598724"	"23"	"0.0009352"	"0.007826"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"617.82422"	"1234.64116"	"1234.64179"	"-0.51"	"-0.00031"	"5/64"	"5"	"64"	"2587551.14294434"	"HCD"	"MS2"	"21.57219"	"121.5"	"100.000"	"78.9832"	"27107"	"27107"	"27086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.9"	""	"149.2"	""	"140.9"	""	"220.8"	"1.2"	"254.4"	"255.6"	""	"712"	"23"	"35.000"	"28.000"	"0.181321790096362"	"18"	"0.006958"	"0.08766"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"617.82428"	"1234.64128"	"1234.64179"	"-0.41"	"-0.00025"	"6/64"	"6"	"64"	"10389322.8150635"	"HCD"	"MS2"	"1.459423"	"371.9"	"94.002"	"79.1402"	"27145"	"27145"	"27128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"339.9"	""	"449.9"	""	"433.0"	""	"643.1"	""	"846.8"	"828.4"	""	"712"	"31"	"35.000"	"28.000"	"0.0309349912825924"	"23"	"0.007069"	"0.0893"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"617.82440"	"1234.64153"	"1234.64179"	"-0.21"	"-0.00013"	"5/64"	"5"	"64"	"2325694.94177246"	"HCD"	"MS2"	"30.23363"	"119.6"	"100.000"	"78.8566"	"27029"	"27029"	"27009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.2"	""	"138.4"	""	"134.5"	""	"209.2"	""	"263.5"	"258.0"	""	"712"	"22"	"35.000"	"28.000"	"0.24013197786046"	"21"	"0.003317"	"0.03595"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"617.82452"	"1234.64177"	"1234.64179"	"-0.01"	"-0.00001"	"11/64"	"11"	"64"	"4657440.62719727"	"HCD"	"MS2"	"4.117731"	"198.1"	"100.000"	"79.5802"	"27351"	"27351"	"27334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.7"	""	"239.4"	""	"221.5"	""	"317.3"	""	"460.5"	"475.1"	""	"751"	"23"	"35.000"	"28.000"	"0.172428853820244"	"18"	"0.006958"	"0.08734"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"617.82465"	"1234.64202"	"1234.64179"	"0.18"	"0.00011"	"6/64"	"6"	"64"	"521201.183349609"	"HCD"	"MS2"	"5.551281"	"33.0"	"100.000"	"79.8982"	"27480"	"27480"	"27461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"40.2"	""	"40.8"	""	"61.8"	"0.3"	"66.8"	"68.6"	""	"751"	"14"	"35.000"	"28.000"	"1.62035413348826"	"19"	"0.002588"	"0.02671"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSWEPFR"	"[R].sPSWEPFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"617.82465"	"1234.64202"	"1234.64179"	"0.18"	"0.00011"	"6/64"	"6"	"64"	"11787565.9937744"	"HCD"	"MS2"	"1.854392"	"424.1"	"94.467"	"79.2806"	"27229"	"27229"	"27212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"393.1"	""	"514.4"	""	"512.7"	""	"739.4"	""	"959.9"	"923.7"	""	"751"	"31"	"35.000"	"28.000"	"0.0321817710884004"	"24"	"0.001261"	"0.009933"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMQNNAK"	"[K].aMQNNAk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"617.85217"	"1234.69707"	"1234.69781"	"-0.60"	"-0.00037"	"6/58"	"6"	"58"	"960081.888427734"	"HCD"	"MS2"	"0"	"89.9"	"100.000"	"24.9887"	"5230"	"5230"	"5218"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"142.1"	""	"116.6"	""	"124.9"	""	"107.1"	"3.7"	"179.9"	"177.9"	""	"781"	"33"	"35.000"	"28.000"	"0.0179316824012797"	""	"0.0003294"	"0.006193"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETASQLK"	"[K].eTASQLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"617.87317"	"1234.73906"	"1234.74072"	"-1.35"	"-0.00083"	"6/58"	"6"	"58"	"2357562.61450195"	"HCD"	"MS2"	"0"	"212.1"	"100.000"	"35.8284"	"9608"	"9608"	"9586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.6"	""	"210.7"	""	"238.8"	""	"389.2"	""	"489.8"	"480.6"	""	"549"	"34"	"34.000"	"27.000"	"0.0122614646045439"	""	"0.006267"	"0.07672"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETASQLK"	"[K].eTASQLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.3667"	"0.0000"	"1"	"1"	"1"	"617.87354"	"1234.73979"	"1234.74072"	"-0.75"	"-0.00046"	"6/58"	"6"	"58"	"2257652.35571289"	"HCD"	"MS2"	"2.957061"	"206.8"	"100.000"	"35.9658"	"9627"	"9627"	"9605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"212.6"	""	"210.2"	""	"230.1"	""	"385.6"	""	"466.7"	"468.1"	""	"545"	"30"	"34.000"	"27.000"	"0.0273757802850862"	""	"0.006997"	"0.08829"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETQTK"	"[R].gLETQTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"617.87360"	"1234.73992"	"1234.74072"	"-0.65"	"-0.00040"	"12/58"	"12"	"58"	"1608021.66430664"	"HCD"	"MS2"	"0"	"143.1"	"100.000"	"34.5547"	"9057"	"9057"	"9031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"267.9"	""	"191.9"	""	"133.7"	""	"273.8"	"3.8"	"262.8"	"220.8"	""	"545"	"38"	"34.000"	"27.000"	"0.00389373603694275"	""	"0.001348"	"0.0106"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETQTK"	"[R].gLETQTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"617.87360"	"1234.73992"	"1234.74072"	"-0.65"	"-0.00040"	"10/58"	"10"	"58"	"2391094.3168335"	"HCD"	"MS2"	"4.141693"	"209.8"	"100.000"	"34.8510"	"9177"	"9177"	"9163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"407.8"	""	"268.9"	""	"217.4"	""	"371.0"	""	"366.4"	"355.3"	""	"545"	"30"	"34.000"	"27.000"	"0.0297417491682286"	"25"	"0.002525"	"0.02404"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETQTK"	"[R].gLETQTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.4412"	"0.0000"	"1"	"1"	"1"	"617.87366"	"1234.74004"	"1234.74072"	"-0.56"	"-0.00034"	"6/58"	"6"	"58"	"2094067.60345459"	"HCD"	"MS2"	"4.998962"	"175.1"	"100.000"	"34.7454"	"9171"	"9171"	"9152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.9"	""	"235.7"	""	"185.7"	""	"325.8"	""	"310.5"	"294.3"	""	"536"	"34"	"34.000"	"27.000"	"0.0118068703419756"	""	"0.001615"	"0.01425"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETQTK"	"[R].gLETQTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"617.87408"	"1234.74089"	"1234.74072"	"0.14"	"0.00008"	"6/58"	"6"	"58"	"2187475.17602539"	"HCD"	"MS2"	"0"	"186.8"	"100.000"	"34.4582"	"9054"	"9054"	"9030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"386.6"	""	"254.4"	""	"166.3"	""	"336.4"	""	"323.9"	"300.0"	""	"506"	"37"	"34.000"	"27.000"	"0.00532255945260918"	"25"	"0.001718"	"0.01501"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETASQLK"	"[K].eTASQLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"412.25208"	"1234.74167"	"1234.74072"	"0.77"	"0.00032"	"5/58"	"5"	"58"	"1108942.9342041"	"HCD"	"MS2"	"7.674747"	"86.5"	"100.000"	"35.7594"	"9580"	"9580"	"9555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.0"	""	"120.3"	""	"122.2"	""	"138.4"	"0.4"	"169.6"	"155.8"	""	"503"	"15"	"34.000"	"27.000"	"0.766545589891438"	"24"	"0.009444"	"0.1252"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTAWTVGR"	"[R].dTTAWTVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"618.33221"	"1235.65715"	"1235.65817"	"-0.82"	"-0.00051"	"6/74"	"6"	"74"	"4772419.33691406"	"HCD"	"MS2"	"0"	"232.7"	"100.000"	"51.6415"	"16018"	"16018"	"15999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"354.4"	""	"313.5"	""	"340.1"	""	"338.8"	"1.7"	"434.7"	"420.8"	""	"760"	"25"	"35.000"	"28.000"	"0.108338694165149"	"25"	"9.9E-05"	"0.0007807"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTAWTVGR"	"[R].dTTAWTVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"618.33240"	"1235.65752"	"1235.65817"	"-0.52"	"-0.00032"	"6/74"	"6"	"74"	"2278096.07653809"	"HCD"	"MS2"	"21.21648"	"151.0"	"100.000"	"51.3227"	"15892"	"15892"	"15873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.7"	"2.6"	"174.0"	""	"204.0"	""	"218.4"	"1.1"	"388.8"	"255.0"	""	"756"	"28"	"35.000"	"28.000"	"0.0555254132949382"	""	"9.9E-05"	"0.0005867"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTAWTVGR"	"[R].dTTAWTVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"618.33252"	"1235.65776"	"1235.65817"	"-0.33"	"-0.00020"	"6/74"	"6"	"74"	"2156481.46453857"	"HCD"	"MS2"	"48.90146"	"143.5"	"100.000"	"51.6125"	"15973"	"15973"	"15954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.9"	""	"164.4"	""	"172.5"	""	"216.3"	"4.1"	"379.0"	"253.8"	""	"753"	"25"	"35.000"	"28.000"	"0.122677517927256"	""	"9.9E-05"	"0.0004042"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTAWTVGR"	"[R].dTTAWTVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"618.33258"	"1235.65788"	"1235.65817"	"-0.23"	"-0.00014"	"6/74"	"6"	"74"	"5388582.78649902"	"HCD"	"MS2"	"0"	"259.0"	"100.000"	"51.8944"	"16086"	"16086"	"16069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"393.9"	""	"354.9"	""	"387.2"	""	"392.2"	""	"459.1"	"467.2"	""	"753"	"33"	"35.000"	"28.000"	"0.0207857155889205"	"26"	"0"	"0.0003423"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSGDSAVK"	"[K].gGSGDSAVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"618.35223"	"1235.69719"	"1235.69959"	"-1.94"	"-0.00120"	"8/70"	"8"	"70"	"1764482.75848389"	"HCD"	"MS2"	"0"	"154.3"	"100.000"	"24.8167"	"5161"	"5161"	"5135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.5"	""	"157.3"	""	"188.9"	""	"266.0"	""	"299.6"	"318.6"	""	"818"	"47"	"36.000"	"29.000"	"0.000838925331139656"	"26"	"0"	"0.0001694"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSGDSAVK"	"[K].gGSGDSAVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"618.35339"	"1235.69951"	"1235.69959"	"-0.06"	"-0.00004"	"8/70"	"8"	"70"	"1656975.42156982"	"HCD"	"MS2"	"12.19997"	"147.3"	"100.000"	"24.7038"	"5152"	"5152"	"5133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.2"	""	"155.7"	""	"157.4"	""	"257.5"	""	"292.8"	"312.1"	""	"753"	"48"	"35.000"	"28.000"	"0.000621963617033224"	"27"	"0"	"0.0001292"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGSGDSAVK"	"[K].gGSGDSAVk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"618.35345"	"1235.69963"	"1235.69959"	"0.04"	"0.00002"	"8/70"	"8"	"70"	"1473338.36358643"	"HCD"	"MS2"	"0"	"138.1"	"100.000"	"24.8024"	"5192"	"5192"	"5176"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.8"	""	"178.2"	""	"173.3"	""	"202.3"	""	"268.4"	"287.8"	""	"753"	"22"	"35.000"	"28.000"	"0.22323638470437"	"26"	"0.0001686"	"0.001338"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEEAVK"	"[K].aMEEAVk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AY97"	"Coiled-coil domain-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Ccdc91 PE=1 SV=1"	"Q6AY97"	"Coiled-coil domain-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Ccdc91 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"618.35638"	"1235.70549"	"1235.70698"	"-1.20"	"-0.00074"	"5/50"	"5"	"50"	"948504.337890625"	"HCD"	"MS2"	"14.257"	"93.3"	"100.000"	"43.2677"	"12587"	"12587"	"12562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.7"	""	"118.5"	""	"125.1"	""	"145.6"	"0.5"	"177.1"	"180.0"	""	"749"	"16"	"35.000"	"28.000"	"0.998738569863295"	"22"	"0.002834"	"0.02976"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"618.35663"	"1235.70598"	"1235.70698"	"-0.81"	"-0.00050"	"12/52"	"12"	"52"	"2747335.40948486"	"HCD"	"MS2"	"8.616559"	"227.3"	"100.000"	"54.5554"	"17206"	"17206"	"17188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"360.1"	""	"342.5"	""	"269.2"	""	"250.0"	""	"445.2"	"492.1"	""	"749"	"39"	"35.000"	"28.000"	"0.00454414124499135"	"27"	"0.001453"	"0.01183"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"618.35669"	"1235.70610"	"1235.70698"	"-0.71"	"-0.00044"	"12/52"	"12"	"52"	"3315271.31091309"	"HCD"	"MS2"	"22.47396"	"246.1"	"100.000"	"54.2452"	"17080"	"17080"	"17063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.4"	""	"378.7"	""	"260.4"	""	"314.1"	""	"482.2"	"460.8"	""	"749"	"37"	"35.000"	"28.000"	"0.00694147592968848"	"26"	"0.001718"	"0.01511"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"618.35693"	"1235.70659"	"1235.70698"	"-0.32"	"-0.00019"	"12/52"	"12"	"52"	"2997131.79223633"	"HCD"	"MS2"	"30.30255"	"222.3"	"100.000"	"54.5739"	"17180"	"17180"	"17157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.6"	""	"364.1"	""	"244.9"	""	"276.6"	""	"430.5"	"414.7"	""	"799"	"37"	"36.000"	"29.000"	"0.00757734015523854"	""	"0.0005778"	"0.007186"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMDAALK"	"[K].eMDAALk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"618.35736"	"1235.70745"	"1235.70698"	"0.38"	"0.00023"	"12/52"	"12"	"52"	"3066534.91558838"	"HCD"	"MS2"	"7.093798"	"241.0"	"100.000"	"54.8869"	"17307"	"17307"	"17287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"377.2"	""	"376.8"	""	"257.0"	""	"277.9"	""	"479.6"	"523.2"	""	"799"	"39"	"36.000"	"29.000"	"0.00481411858178534"	"29"	"0.001488"	"0.01243"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNQAPGK"	"[K].yNQAPGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"618.36060"	"1235.71391"	"1235.71484"	"-0.75"	"-0.00046"	"6/60"	"6"	"60"	"2076193.10748291"	"HCD"	"MS2"	"0"	"165.6"	"100.000"	"32.8627"	"8369"	"8369"	"8345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"273.6"	""	"217.1"	""	"225.4"	""	"225.6"	"2.5"	"324.1"	"300.4"	""	"685"	"22"	"35.000"	"28.000"	"0.21069807890313"	"17"	"0.00307"	"0.03432"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNQAPGK"	"[K].yNQAPGk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"618.36115"	"1235.71501"	"1235.71484"	"0.14"	"0.00009"	"6/60"	"6"	"60"	"1972779.22857666"	"HCD"	"MS2"	"9.162841"	"159.6"	"100.000"	"32.7890"	"8377"	"8377"	"8347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.0"	""	"212.0"	""	"211.5"	""	"212.5"	"6.1"	"312.4"	"309.1"	""	"680"	"22"	"35.000"	"28.000"	"0.220535707406401"	"17"	"0.009846"	"0.133"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.2703"	"0.0000"	"1"	"1"	"1"	"618.36432"	"1235.72136"	"1235.72474"	"-2.73"	"-0.00169"	"6/54"	"6"	"54"	"3166734.41571045"	"HCD"	"MS2"	"18.69691"	"260.5"	"100.000"	"46.5580"	"13922"	"13922"	"13915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"354.9"	""	"310.1"	""	"363.6"	""	"455.3"	"0.8"	"510.9"	"473.8"	""	"647"	"37"	"35.000"	"28.000"	"0.00613584365511806"	""	"0.001103"	"0.008984"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"618.36432"	"1235.72136"	"1235.72474"	"-2.73"	"-0.00169"	"10/54"	"10"	"54"	"3125021.67504883"	"HCD"	"MS2"	"0"	"240.8"	"100.000"	"46.1784"	"13806"	"13806"	"13793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"331.5"	""	"279.8"	""	"296.9"	""	"431.4"	""	"502.1"	"447.3"	""	"647"	"24"	"35.000"	"28.000"	"0.142191712594136"	"18"	"0.003529"	"0.03865"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"618.36438"	"1235.72148"	"1235.72474"	"-2.63"	"-0.00163"	"6/54"	"6"	"54"	"3597630.80010986"	"HCD"	"MS2"	"0"	"275.2"	"100.000"	"46.4671"	"13920"	"13920"	"13902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"366.5"	""	"318.6"	""	"383.6"	""	"481.4"	""	"557.5"	"506.9"	""	"644"	"36"	"35.000"	"28.000"	"0.00833404558679295"	""	"0.002189"	"0.02102"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"618.36469"	"1235.72209"	"1235.72474"	"-2.14"	"-0.00132"	"6/54"	"6"	"54"	"2409265.12835693"	"HCD"	"MS2"	"11.89365"	"180.6"	"100.000"	"46.9474"	"14077"	"14077"	"14061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.0"	""	"214.4"	""	"251.3"	""	"300.7"	""	"382.9"	"340.9"	""	"643"	"33"	"35.000"	"28.000"	"0.0176677390945226"	""	"0.00212"	"0.01916"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LTSDDVK"	"[K].lTSDDVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"618.36481"	"1235.72234"	"1235.72474"	"-1.94"	"-0.00120"	"8/54"	"8"	"54"	"2977697.29406738"	"HCD"	"MS2"	"33.04097"	"239.2"	"100.000"	"46.2793"	"13814"	"13814"	"13793"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.3"	""	"272.3"	""	"316.8"	""	"422.6"	"2.9"	"491.2"	"435.8"	""	"646"	"12"	"35.000"	"28.000"	"1.84163059946681"	"16"	"0.004998"	"0.06376"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTASQAK"	"[K].aTTASQAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"618.37073"	"1235.73418"	"1235.73597"	"-1.45"	"-0.00090"	"14/66"	"14"	"66"	"705105.030944824"	"HCD"	"MS2"	"0"	"65.1"	"100.000"	"23.6133"	"4707"	"4707"	"4692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.9"	""	"78.2"	""	"95.6"	""	"116.8"	"0.7"	"129.9"	"104.5"	""	"515"	"54"	"34.000"	"27.000"	"0.000107839343017864"	"27"	"0"	"0.0002606"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTASQAK"	"[K].aTTASQAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"618.37079"	"1235.73430"	"1235.73597"	"-1.35"	"-0.00084"	"14/66"	"14"	"66"	"951631.83404541"	"HCD"	"MS2"	"0"	"89.8"	"100.000"	"23.7149"	"4711"	"4711"	"4684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.1"	""	"109.5"	""	"139.2"	""	"158.8"	""	"166.4"	"152.3"	""	"515"	"49"	"34.000"	"27.000"	"0.000339451110178275"	"26"	"0"	"0.0001239"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEPYGK"	"[K].lAEPYGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"618.37286"	"1235.73845"	"1235.73999"	"-1.25"	"-0.00077"	"6/48"	"6"	"48"	"1135856.3916626"	"HCD"	"MS2"	"48.8555"	"96.4"	"100.000"	"55.1943"	"17433"	"17433"	"17405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.3"	""	"100.3"	""	"91.4"	""	"170.2"	""	"211.5"	"226.6"	""	"490"	"24"	"33.000"	"26.000"	"0.0906079040461652"	""	"0.001951"	"0.01719"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEPYGK"	"[K].lAEPYGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"618.37378"	"1235.74028"	"1235.73999"	"0.23"	"0.00014"	"4/48"	"4"	"48"	"780901.05456543"	"HCD"	"MS2"	"38.87839"	"68.7"	"100.000"	"55.1921"	"17466"	"17466"	"17442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.4"	""	"86.3"	""	"76.5"	""	"115.0"	""	"143.1"	"146.5"	""	"489"	"12"	"33.000"	"26.000"	"1.72694642017294"	"19"	"0.006074"	"0.07437"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAEPYGK"	"[K].lAEPYGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"618.37390"	"1235.74053"	"1235.73999"	"0.43"	"0.00027"	"6/48"	"6"	"48"	"1134794.11407471"	"HCD"	"MS2"	"41.84694"	"100.5"	"100.000"	"54.8263"	"17317"	"17317"	"17290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.0"	""	"108.8"	""	"89.5"	""	"168.4"	""	"221.7"	"227.2"	""	"477"	"23"	"33.000"	"26.000"	"0.114944549733593"	""	"0.001348"	"0.01078"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELSIK"	"[R].tSELSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"618.38336"	"1235.75945"	"1235.76112"	"-1.36"	"-0.00084"	"6/56"	"6"	"56"	"7228006.26849365"	"HCD"	"MS2"	"4.288459"	"537.9"	"100.000"	"55.7422"	"17688"	"17688"	"17678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"864.2"	""	"752.5"	""	"744.0"	""	"976.4"	""	"837.1"	"918.4"	""	"341"	"37"	"32.000"	"25.000"	"0.00363684157691491"	""	"0.002328"	"0.02224"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELSIK"	"[R].tSELSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"618.38373"	"1235.76018"	"1235.76112"	"-0.76"	"-0.00047"	"6/56"	"6"	"56"	"5240482.61846924"	"HCD"	"MS2"	"0"	"416.6"	"100.000"	"55.6714"	"17661"	"17661"	"17646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"688.8"	""	"553.6"	""	"576.3"	""	"741.5"	""	"679.2"	"701.5"	""	"341"	"31"	"32.000"	"25.000"	"0.0138907080425553"	""	"0.001951"	"0.01652"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELSIK"	"[R].tSELSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"618.38397"	"1235.76067"	"1235.76112"	"-0.37"	"-0.00023"	"6/56"	"6"	"56"	"5720771.92175293"	"HCD"	"MS2"	"0"	"421.1"	"100.000"	"56.0235"	"17769"	"17769"	"17757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"645.2"	""	"596.2"	""	"561.8"	""	"770.2"	""	"705.9"	"712.5"	""	"320"	"31"	"32.000"	"25.000"	"0.0121372412004669"	""	"0.002189"	"0.02118"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CNGVLEGIR"	"[R].cnGVLEGIR.[I]"	"N-Term(TMT6plex); C1(Methylthio); N2(Deamidated)"	"4"	"7"	"Q62812; Q63862; P12847; Q9JLT0"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q62812; Q29RW1; Q63862; P12847; P02564; Q9JLT0; P02563"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-4 OS=Rattus norvegicus OX=10116 GN=Myh4 PE=1 SV=1; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1; Myosin-7 OS=Rattus norvegicus OX=10116 GN=Myh7 PE=1 SV=2; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1; Myosin-6 OS=Rattus norvegicus OX=10116 GN=Myh6 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"618.81677"	"1236.62627"	"1236.62780"	"-1.23"	"-0.00076"	"5/78"	"5"	"78"	"209217.987731934"	"HCD"	"MS2"	"33.56192"	"13.8"	"100.000"	"96.3271"	"34078"	"34078"	"34050"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.4"	""	"19.2"	""	"17.3"	""	"22.9"	"1.2"	"23.7"	"31.0"	""	"652"	"16"	"35.000"	"28.000"	"0.738274044275337"	"19"	"0.004392"	"0.05226"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFSPEGR"	"[R].tTIFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"618.84210"	"1236.67693"	"1236.67857"	"-1.33"	"-0.00082"	"9/76"	"9"	"76"	"7564649.2845459"	"HCD"	"MS2"	"0"	"327.2"	"100.000"	"56.3519"	"17933"	"17933"	"17923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"507.8"	""	"422.5"	""	"454.2"	""	"518.3"	""	"583.2"	"615.9"	""	"816"	"36"	"36.000"	"29.000"	"0.00974227003428577"	"21"	"0.0007633"	"0.007324"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFSPEGR"	"[R].tTIFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"618.84235"	"1236.67742"	"1236.67857"	"-0.93"	"-0.00058"	"9/76"	"9"	"76"	"7820714.7565918"	"HCD"	"MS2"	"0"	"342.7"	"100.000"	"56.6581"	"18021"	"18021"	"18010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"548.1"	""	"437.0"	""	"494.4"	""	"532.5"	""	"588.6"	"643.7"	""	"816"	"36"	"36.000"	"29.000"	"0.00985508020453536"	"21"	"0.001348"	"0.01076"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSLEQLR"	"[R].dFSLEQLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"618.84247"	"1236.67766"	"1236.67857"	"-0.73"	"-0.00045"	"6/68"	"6"	"68"	"1366720.31738281"	"HCD"	"MS2"	"6.525215"	"70.0"	"100.000"	"91.9507"	"32344"	"32344"	"32326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.1"	""	"61.6"	""	"77.0"	""	"136.5"	"0.8"	"139.5"	"163.2"	""	"826"	"36"	"36.000"	"29.000"	"0.0107386589958726"	"23"	"0.0001991"	"0.002185"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSLEQLR"	"[R].dFSLEQLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"618.84253"	"1236.67778"	"1236.67857"	"-0.64"	"-0.00039"	"6/68"	"6"	"68"	"450657.155029297"	"HCD"	"MS2"	"41.50714"	"23.8"	"100.000"	"91.7391"	"32223"	"32223"	"32196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"26.5"	""	"26.0"	""	"43.4"	""	"57.5"	"45.6"	""	"824"	"30"	"36.000"	"29.000"	"0.0388953081029801"	"20"	"0.0001991"	"0.002618"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQEFR"	"[R].dSLLQEFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"618.84259"	"1236.67790"	"1236.67857"	"-0.54"	"-0.00033"	"6/72"	"6"	"72"	"836854.132629395"	"HCD"	"MS2"	"40.13241"	"38.9"	"100.000"	"93.1863"	"32804"	"32804"	"32783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.7"	""	"43.1"	""	"43.9"	""	"86.5"	""	"77.3"	"66.7"	""	"824"	"19"	"36.000"	"29.000"	"0.511560750728074"	"25"	"0.001261"	"0.009896"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"618.84259"	"1236.67790"	"1236.67857"	"-0.54"	"-0.00033"	"7/78"	"7"	"78"	"3618297.97583008"	"HCD"	"MS2"	"0"	"163.4"	"100.000"	"65.7306"	"21708"	"21708"	"21691"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.1"	""	"201.6"	""	"230.2"	""	"269.5"	""	"280.0"	"307.7"	""	"824"	"50"	"36.000"	"29.000"	"0.000425497699173696"	"24"	"0"	"0.0001581"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"618.84265"	"1236.67803"	"1236.67857"	"-0.44"	"-0.00027"	"7/78"	"7"	"78"	"3487918.1161499"	"HCD"	"MS2"	"0.945526"	"156.9"	"100.000"	"65.6994"	"21728"	"21728"	"21710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"244.4"	""	"201.1"	""	"214.5"	""	"262.7"	"0.5"	"286.7"	"276.2"	""	"826"	"52"	"36.000"	"29.000"	"0.000266041906657768"	"25"	"0"	"0.0001299"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"618.84277"	"1236.67827"	"1236.67857"	"-0.24"	"-0.00015"	"7/78"	"7"	"78"	"1331097.14898682"	"HCD"	"MS2"	"2.323661"	"74.8"	"100.000"	"66.0013"	"21851"	"21851"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.9"	""	"96.7"	""	"89.6"	""	"116.3"	""	"151.1"	"152.5"	""	"809"	"46"	"36.000"	"29.000"	"0.00112439401680863"	"21"	"0"	"3.527E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"618.84283"	"1236.67839"	"1236.67857"	"-0.14"	"-0.00009"	"7/78"	"7"	"78"	"1128475.2845459"	"HCD"	"MS2"	"0"	"70.6"	"100.000"	"66.0507"	"21838"	"21838"	"21817"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.2"	""	"84.9"	""	"94.1"	""	"119.4"	"2.4"	"139.9"	"132.3"	""	"809"	"38"	"36.000"	"29.000"	"0.00644048430092198"	"19"	"0"	"0.000142"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFSPEGR"	"[R].tTIFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"618.84296"	"1236.67864"	"1236.67857"	"0.06"	"0.00003"	"9/76"	"9"	"76"	"1798309.31799316"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"56.6452"	"18050"	"18050"	"18037"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.0"	""	"135.0"	""	"132.8"	""	"179.9"	""	"196.4"	"207.1"	""	"810"	"35"	"36.000"	"29.000"	"0.0117342415301903"	"28"	"0.008926"	"0.1156"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFSPEGR"	"[R].tTIFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"618.84296"	"1236.67864"	"1236.67857"	"0.06"	"0.00003"	"6/76"	"6"	"76"	"4227536.22845459"	"HCD"	"MS2"	"44.70964"	"261.9"	"100.000"	"56.0538"	"17812"	"17812"	"17796"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"406.9"	""	"355.3"	""	"396.3"	""	"425.5"	""	"456.4"	"442.2"	""	"810"	"29"	"36.000"	"29.000"	"0.0525357604748502"	"17"	"0.004819"	"0.05889"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSLEQLR"	"[R].dFSLEQLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"618.84302"	"1236.67876"	"1236.67857"	"0.15"	"0.00010"	"5/68"	"5"	"68"	"250314.581787109"	"HCD"	"MS2"	"9.240064"	"16.9"	"100.000"	"92.3363"	"32465"	"32465"	"32449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"21.6"	""	"20.1"	""	"29.7"	""	"30.1"	"36.4"	""	"811"	"11"	"36.000"	"29.000"	"3.14044259008921"	"18"	"0.002875"	"0.0312"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSLEQLR"	"[R].dFSLEQLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"Q5XIU9"	"Membrane-associated progesterone receptor component 2 OS=Rattus norvegicus OX=10116 GN=Pgrmc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"618.84308"	"1236.67888"	"1236.67857"	"0.25"	"0.00016"	"6/68"	"6"	"68"	"1309039.20452881"	"HCD"	"MS2"	"11.41474"	"67.9"	"100.000"	"92.0575"	"32352"	"32352"	"32334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.6"	""	"68.3"	""	"69.2"	""	"124.8"	"1.1"	"142.6"	"145.6"	""	"811"	"31"	"36.000"	"29.000"	"0.0319147067721363"	"20"	"0.0001991"	"0.002601"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTIFSPEGR"	"[R].tTIFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"618.84308"	"1236.67888"	"1236.67857"	"0.25"	"0.00016"	"6/76"	"6"	"76"	"1042530.70629883"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"57.0041"	"18161"	"18161"	"18142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.3"	""	"81.0"	""	"80.1"	""	"109.2"	"0.2"	"135.7"	"128.8"	""	"811"	"33"	"36.000"	"29.000"	"0.0204640156162011"	"27"	"0.004392"	"0.05179"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQEFR"	"[R].dSLLQEFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"Q64240"	"Protein AMBP OS=Rattus norvegicus OX=10116 GN=Ambp PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"618.84320"	"1236.67912"	"1236.67857"	"0.45"	"0.00028"	"6/72"	"6"	"72"	"876233.563720703"	"HCD"	"MS2"	"38.6704"	"40.1"	"100.000"	"93.1365"	"32820"	"32820"	"32800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.8"	""	"44.9"	""	"42.7"	""	"82.9"	"0.1"	"76.0"	"78.3"	""	"859"	"28"	"36.000"	"29.000"	"0.0635277052718245"	"27"	"0.0001991"	"0.003247"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.4651"	"0.0000"	"1"	"1"	"1"	"618.84344"	"1236.67961"	"1236.67857"	"0.85"	"0.00052"	"7/78"	"7"	"78"	"862324.777648926"	"HCD"	"MS2"	"16.15879"	"51.2"	"100.000"	"65.4495"	"21593"	"21593"	"21567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.2"	""	"67.6"	""	"70.1"	""	"87.5"	""	"96.4"	"89.6"	""	"857"	"43"	"36.000"	"29.000"	"0.00229588867744467"	""	"0"	"8.625E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFISAAER"	"[K].dVFISAAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"618.84521"	"1236.68315"	"1236.67857"	"3.71"	"0.00229"	"7/78"	"7"	"78"	"676633.86895752"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"65.4138"	"21612"	"21612"	"21584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.2"	""	"53.5"	""	"54.7"	""	"67.3"	"1.5"	"76.6"	"81.2"	""	"825"	"39"	"36.000"	"29.000"	"0.00518112360024136"	""	"9.9E-05"	"0.0004449"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVQGSQVR"	"[R].fSVQGSQVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"618.84747"	"1236.68767"	"1236.68980"	"-1.72"	"-0.00107"	"7/82"	"7"	"82"	"3812664.69232178"	"HCD"	"MS2"	"0"	"195.3"	"100.000"	"44.3681"	"13036"	"13036"	"13009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"238.0"	""	"248.4"	""	"260.7"	""	"328.5"	""	"356.5"	"424.7"	""	"838"	"47"	"36.000"	"29.000"	"0.000757205958798579"	"26"	"9.9E-05"	"0.0004619"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"618.84778"	"1236.68828"	"1236.68980"	"-1.23"	"-0.00076"	"6/72"	"6"	"72"	"3182951.63891602"	"HCD"	"MS2"	"19.56585"	"184.9"	"100.000"	"40.2006"	"11377"	"11377"	"11354"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"297.8"	""	"237.5"	""	"261.5"	""	"287.6"	"0.2"	"330.4"	"335.1"	""	"829"	"35"	"36.000"	"29.000"	"0.0139484045506141"	"27"	"0.0001991"	"0.002912"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVQGSQVR"	"[R].fSVQGSQVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"618.84833"	"1236.68938"	"1236.68980"	"-0.34"	"-0.00021"	"7/82"	"7"	"82"	"2344738.18475342"	"HCD"	"MS2"	"21.69542"	"188.6"	"100.000"	"44.6799"	"13162"	"13162"	"13143"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.3"	""	"218.2"	""	"211.9"	""	"315.5"	""	"380.4"	"411.2"	""	"805"	"37"	"36.000"	"29.000"	"0.00816142294607316"	"21"	"0"	"0.000218"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVQGSQVR"	"[R].fSVQGSQVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"618.84833"	"1236.68938"	"1236.68980"	"-0.34"	"-0.00021"	"7/82"	"7"	"82"	"2426195.95153809"	"HCD"	"MS2"	"7.577985"	"184.1"	"100.000"	"44.4717"	"13112"	"13112"	"13100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.1"	""	"208.1"	""	"217.3"	""	"334.3"	""	"353.7"	"396.5"	""	"805"	"31"	"36.000"	"29.000"	"0.0286263439245465"	"19"	"0.0001991"	"0.002122"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"618.84833"	"1236.68938"	"1236.68980"	"-0.34"	"-0.00021"	"6/72"	"6"	"72"	"7956297.79345703"	"HCD"	"MS2"	"0"	"366.3"	"100.000"	"40.6091"	"11509"	"11509"	"11495"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"600.2"	""	"515.5"	""	"578.9"	""	"513.7"	"2.7"	"603.9"	"649.1"	""	"805"	"32"	"36.000"	"29.000"	"0.0263491060062078"	"24"	"0.001348"	"0.0109"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"618.84833"	"1236.68938"	"1236.68980"	"-0.34"	"-0.00021"	"6/72"	"6"	"72"	"8531367.60491943"	"HCD"	"MS2"	"0"	"411.9"	"96.501"	"40.4903"	"11495"	"11495"	"11479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"699.1"	""	"587.1"	""	"625.0"	""	"554.2"	"0.0"	"689.4"	"740.7"	""	"805"	"34"	"36.000"	"29.000"	"0.0166634869114942"	"25"	"0.001217"	"0.009455"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"618.84845"	"1236.68962"	"1236.68980"	"-0.14"	"-0.00009"	"6/72"	"6"	"72"	"937993.518920898"	"HCD"	"MS2"	"12.24893"	"84.1"	"100.000"	"40.9145"	"11633"	"11633"	"11611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.1"	""	"113.0"	""	"111.2"	""	"127.8"	"2.3"	"156.0"	"167.1"	""	"803"	"28"	"36.000"	"29.000"	"0.0597978472700933"	"23"	"0.0001991"	"0.003925"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQQNTFTR"	"[K].iQQNTFTR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"618.84857"	"1236.68987"	"1236.68980"	"0.05"	"0.00003"	"6/72"	"6"	"72"	"3212876.43731689"	"HCD"	"MS2"	"22.96855"	"185.6"	"100.000"	"40.2987"	"11383"	"11383"	"11357"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"307.2"	""	"237.9"	""	"254.7"	""	"294.6"	""	"323.5"	"341.4"	""	"803"	"35"	"36.000"	"29.000"	"0.0120972191871073"	"26"	"0.0001991"	"0.005329"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSVQGSQVR"	"[R].fSVQGSQVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"618.84869"	"1236.69011"	"1236.68980"	"0.25"	"0.00015"	"7/82"	"7"	"82"	"3783354.82672119"	"HCD"	"MS2"	"0"	"202.6"	"100.000"	"44.1736"	"12992"	"12992"	"12969"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.8"	""	"262.0"	""	"251.4"	""	"339.0"	""	"378.4"	"436.0"	""	"803"	"47"	"36.000"	"29.000"	"0.000747627985370142"	"24"	"0"	"0.0001858"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMADNSK"	"[R].iMADNSk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"618.85480"	"1236.70232"	"1236.70223"	"0.07"	"0.00004"	"6/56"	"6"	"56"	"3325512.98803711"	"HCD"	"MS2"	"41.28736"	"299.9"	"100.000"	"42.0672"	"12097"	"12097"	"12076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"491.3"	""	"358.2"	""	"430.5"	""	"449.1"	""	"539.2"	"578.6"	""	"814"	"9"	"36.000"	"29.000"	"5.59235083830093"	"20"	"0.007601"	"0.09708"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASANMDLMR"	"[K].aSANMDLMR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"619.31458"	"1237.62187"	"1237.62304"	"-0.95"	"-0.00058"	"8/82"	"8"	"82"	"2947395.26086426"	"HCD"	"MS2"	"14.84984"	"180.7"	"100.000"	"52.0902"	"16166"	"16166"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"280.3"	""	"240.7"	""	"282.6"	""	"207.2"	""	"328.6"	"375.6"	""	"557"	"38"	"34.000"	"27.000"	"0.0045271532847651"	"25"	"0"	"0.0001706"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASANMDLMR"	"[K].aSANMDLMR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"619.31470"	"1237.62212"	"1237.62304"	"-0.75"	"-0.00046"	"7/82"	"7"	"82"	"2754785.99273682"	"HCD"	"MS2"	"12.72888"	"163.7"	"100.000"	"51.7908"	"16078"	"16078"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.0"	""	"220.9"	""	"228.2"	""	"190.6"	""	"325.2"	"333.3"	""	"557"	"38"	"34.000"	"27.000"	"0.00417662226687411"	"22"	"0"	"0.0003131"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMADFQAGR"	"[R].lMADFQAGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.33063"	"1237.65398"	"1237.65606"	"-1.68"	"-0.00104"	"7/70"	"7"	"70"	"755025.16583252"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"77.2692"	"26415"	"26415"	"26400"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.3"	""	"69.6"	""	"80.3"	""	"47.9"	""	"69.7"	"85.2"	""	"734"	"15"	"35.000"	"28.000"	"1.05600521820799"	"13"	"0.0001991"	"0.003818"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMADFQAGR"	"[R].lMADFQAGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.33081"	"1237.65434"	"1237.65606"	"-1.38"	"-0.00086"	"7/70"	"7"	"70"	"755924.141784668"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"77.2990"	"26427"	"26427"	"26406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.0"	""	"65.2"	""	"66.9"	""	"46.9"	""	"64.6"	"85.3"	""	"710"	"22"	"35.000"	"28.000"	"0.212925832070706"	"14"	"9.9E-05"	"0.0007807"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMADFQAGR"	"[R].lMADFQAGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"619.33130"	"1237.65532"	"1237.65606"	"-0.60"	"-0.00037"	"6/70"	"6"	"70"	"823972.490539551"	"HCD"	"MS2"	"26.00216"	"45.5"	"100.000"	"77.2458"	"26375"	"26375"	"26367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.7"	""	"75.4"	""	"74.1"	""	"51.6"	"0.3"	"75.7"	"86.7"	""	"717"	"18"	"35.000"	"28.000"	"0.588151433692035"	"15"	"0.001103"	"0.009184"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGPDSEK"	"[K].fGPDSEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"Q8K3K4"	"Serpin B10 OS=Rattus norvegicus OX=10116 GN=Serpinb10 PE=2 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"619.34448"	"1237.68169"	"1237.68287"	"-0.96"	"-0.00059"	"10/52"	"10"	"52"	"1949347.14031982"	"HCD"	"MS2"	"0"	"171.1"	"100.000"	"45.3884"	"13484"	"13484"	"13464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"253.3"	""	"189.6"	""	"208.4"	""	"308.2"	"2.2"	"330.6"	"330.3"	""	"795"	"23"	"35.000"	"29.000"	"0.191574249555988"	"24"	"0.003568"	"0.03952"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEVYPK"	"[K].sGEVYPk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"619.36200"	"1237.71672"	"1237.71926"	"-2.05"	"-0.00127"	"6/52"	"6"	"52"	"2656577.21157837"	"HCD"	"MS2"	"23.206"	"218.5"	"100.000"	"39.2325"	"10988"	"10988"	"10971"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"325.0"	""	"290.0"	""	"321.3"	""	"337.0"	""	"379.1"	"420.6"	""	"534"	"18"	"34.000"	"27.000"	"0.441073800127147"	""	"0.006814"	"0.08511"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAAFDK"	"[K].dLAAFDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"619.36249"	"1237.71770"	"1237.71926"	"-1.26"	"-0.00078"	"10/58"	"10"	"58"	"875140.927368164"	"HCD"	"MS2"	"25.37114"	"62.4"	"100.000"	"80.6860"	"27800"	"27800"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.2"	""	"80.1"	""	"85.1"	""	"105.5"	"0.3"	"99.4"	"126.0"	""	"533"	"26"	"34.000"	"27.000"	"0.0597994532688107"	""	"0.0009964"	"0.008439"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEVYPK"	"[K].sGEVYPk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"619.36249"	"1237.71770"	"1237.71926"	"-1.26"	"-0.00078"	"6/52"	"6"	"52"	"2425477.15686035"	"HCD"	"MS2"	"0"	"205.1"	"100.000"	"39.2945"	"10979"	"10979"	"10960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.9"	""	"263.4"	""	"267.0"	""	"320.3"	""	"389.4"	"377.6"	""	"533"	"24"	"34.000"	"27.000"	"0.118221703607727"	"27"	"0.00212"	"0.01961"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEAVDK"	"[K].aFEAVDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q642C0"	"DnaJ homolog subfamily C member 8 OS=Rattus norvegicus OX=10116 GN=Dnajc8 PE=2 SV=1"	"Q642C0"	"DnaJ homolog subfamily C member 8 OS=Rattus norvegicus OX=10116 GN=Dnajc8 PE=2 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"619.36255"	"1237.71782"	"1237.71926"	"-1.16"	"-0.00072"	"12/54"	"12"	"54"	"1207425.31738281"	"HCD"	"MS2"	"25.39284"	"106.0"	"100.000"	"57.6591"	"18427"	"18427"	"18407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.1"	""	"134.8"	""	"139.0"	""	"172.2"	""	"206.3"	"202.5"	""	"533"	"25"	"34.000"	"27.000"	"0.0903019676110974"	"27"	"0.001615"	"0.01347"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAAFDK"	"[K].dLAAFDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"619.36267"	"1237.71807"	"1237.71926"	"-0.96"	"-0.00060"	"6/58"	"6"	"58"	"2465509.17163086"	"HCD"	"MS2"	"32.64646"	"190.0"	"100.000"	"80.0804"	"27527"	"27527"	"27509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.5"	""	"276.1"	""	"256.8"	""	"336.4"	"1.8"	"298.4"	"303.0"	""	"533"	"33"	"34.000"	"27.000"	"0.0144443237292033"	""	"0.001316"	"0.01038"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEAVDK"	"[K].aFEAVDk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q642C0"	"DnaJ homolog subfamily C member 8 OS=Rattus norvegicus OX=10116 GN=Dnajc8 PE=2 SV=1"	"Q642C0"	"DnaJ homolog subfamily C member 8 OS=Rattus norvegicus OX=10116 GN=Dnajc8 PE=2 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"619.36273"	"1237.71819"	"1237.71926"	"-0.87"	"-0.00054"	"12/54"	"12"	"54"	"1256477.63903809"	"HCD"	"MS2"	"32.01812"	"111.1"	"100.000"	"57.4192"	"18365"	"18365"	"18341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.0"	""	"145.2"	""	"154.2"	""	"170.1"	"0.9"	"201.5"	"213.0"	""	"533"	"25"	"34.000"	"27.000"	"0.077749429923131"	""	"0.001872"	"0.01542"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAAFDK"	"[K].dLAAFDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"619.36304"	"1237.71880"	"1237.71926"	"-0.37"	"-0.00023"	"6/58"	"6"	"58"	"3438216.52984619"	"HCD"	"MS2"	"11.95674"	"243.5"	"100.000"	"80.3772"	"27647"	"27647"	"27634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"408.7"	""	"322.1"	""	"316.0"	""	"440.3"	""	"392.6"	"425.5"	""	"528"	"35"	"34.000"	"27.000"	"0.00928119562994707"	""	"0.001453"	"0.0116"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAAFDK"	"[K].dLAAFDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"619.36340"	"1237.71953"	"1237.71926"	"0.22"	"0.00014"	"6/58"	"6"	"58"	"3898118.75933838"	"HCD"	"MS2"	"10.85891"	"298.0"	"100.000"	"80.3679"	"27670"	"27670"	"27660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"498.1"	""	"375.8"	""	"411.1"	""	"531.5"	""	"486.0"	"521.4"	""	"530"	"33"	"34.000"	"27.000"	"0.0132814616911227"	""	"0.001774"	"0.01526"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAAFDK"	"[K].dLAAFDk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"619.36383"	"1237.72038"	"1237.71926"	"0.91"	"0.00056"	"6/58"	"6"	"58"	"479595.094177246"	"HCD"	"MS2"	"37.11994"	"34.2"	"100.000"	"80.6838"	"27772"	"27772"	"27752"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.3"	""	"45.2"	""	"43.8"	""	"64.3"	""	"58.4"	"67.7"	""	"526"	"23"	"34.000"	"27.000"	"0.133645933393427"	""	"0.0005778"	"0.007145"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISMADVK"	"[R].iSmADVk.[F]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"619.36395"	"1237.72063"	"1237.72263"	"-1.62"	"-0.00100"	"6/54"	"6"	"54"	"4290681.0057373"	"HCD"	"MS2"	"20.3716"	"268.2"	"100.000"	"44.6001"	"13164"	"13164"	"13148"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.0"	""	"244.3"	""	"246.7"	""	"741.0"	""	"531.4"	"529.8"	""	"498"	"22"	"33.000"	"26.000"	"0.146960068962789"	"19"	"0.003818"	"0.04169"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYTGDALR"	"[R].dVYTGDALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"619.83197"	"1238.65666"	"1238.65783"	"-0.94"	"-0.00058"	"7/74"	"7"	"74"	"2782889.60180664"	"HCD"	"MS2"	"17.75672"	"202.2"	"100.000"	"49.8626"	"15298"	"15298"	"15276"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.2"	""	"279.4"	""	"279.8"	""	"289.7"	""	"378.6"	"360.6"	""	"692"	"43"	"35.000"	"28.000"	"0.00173810535974746"	"25"	"0"	"9.044E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVYTGDALR"	"[R].dVYTGDALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"619.83197"	"1238.65666"	"1238.65783"	"-0.94"	"-0.00058"	"7/74"	"7"	"74"	"3016576.70526123"	"HCD"	"MS2"	"20.53162"	"214.6"	"100.000"	"50.2158"	"15407"	"15407"	"15382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"326.1"	""	"289.8"	""	"314.3"	""	"287.9"	""	"411.7"	"408.7"	""	"692"	"44"	"35.000"	"28.000"	"0.00145236608460889"	"26"	"9.9E-05"	"0.0004685"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMADAMK"	"[K].nMADAMk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"619.83484"	"1238.66240"	"1238.66374"	"-1.08"	"-0.00067"	"6/60"	"6"	"60"	"3343158.17572021"	"HCD"	"MS2"	"19.76508"	"292.4"	"100.000"	"46.0587"	"13724"	"13724"	"13700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"480.4"	""	"398.4"	""	"423.5"	""	"331.6"	""	"515.8"	"622.0"	""	"715"	"37"	"35.000"	"28.000"	"0.00701901298968886"	""	"0.001951"	"0.01656"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMADAMK"	"[K].nMADAMk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"619.83521"	"1238.66313"	"1238.66374"	"-0.49"	"-0.00030"	"12/60"	"12"	"60"	"3869463.8704834"	"HCD"	"MS2"	"14.38501"	"344.9"	"100.000"	"45.7699"	"13640"	"13640"	"13621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"580.4"	""	"458.5"	""	"490.6"	""	"399.1"	""	"623.1"	"716.4"	""	"731"	"39"	"35.000"	"28.000"	"0.00515095055823195"	""	"0.001217"	"0.009285"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTVYGLPR"	"[R].gmTVYGLPR.[Q]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84125"	"1238.67522"	"1238.67646"	"-1.00"	"-0.00062"	"7/64"	"7"	"64"	"941782.763549805"	"HCD"	"MS2"	"13.04745"	"53.4"	"100.000"	"52.6825"	"16408"	"16408"	"16385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.8"	""	"70.8"	""	"89.6"	""	"113.4"	""	"94.3"	"69.6"	""	"701"	"28"	"35.000"	"28.000"	"0.0547883248745654"	"14"	"0.007717"	"0.09853"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTVYGLPR"	"[R].gmTVYGLPR.[Q]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"619.84131"	"1238.67534"	"1238.67646"	"-0.90"	"-0.00056"	"6/64"	"6"	"64"	"1570325.22143555"	"HCD"	"MS2"	"35.49054"	"85.1"	"100.000"	"52.0288"	"16175"	"16175"	"16155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.2"	""	"108.4"	""	"140.0"	""	"168.9"	""	"146.1"	"133.4"	""	"707"	"24"	"35.000"	"28.000"	"0.153953447347849"	"15"	"0.003317"	"0.03718"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTVYGLPR"	"[R].gmTVYGLPR.[Q]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84149"	"1238.67571"	"1238.67646"	"-0.61"	"-0.00038"	"8/64"	"8"	"64"	"1073629.77355957"	"HCD"	"MS2"	"13.41761"	"56.9"	"100.000"	"52.3351"	"16300"	"16300"	"16278"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.4"	""	"74.4"	""	"98.5"	""	"114.6"	""	"95.6"	"79.4"	""	"703"	"35"	"35.000"	"28.000"	"0.0110388880589749"	"15"	"0.002462"	"0.02294"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMTVYGLPR"	"[R].gmTVYGLPR.[Q]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84167"	"1238.67607"	"1238.67646"	"-0.31"	"-0.00019"	"7/64"	"7"	"64"	"1460094.36523438"	"HCD"	"MS2"	"19.97867"	"75.4"	"100.000"	"52.3762"	"16283"	"16283"	"16259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.5"	""	"99.0"	""	"121.5"	""	"150.8"	""	"138.4"	"103.5"	""	"695"	"34"	"35.000"	"28.000"	"0.0148578102937676"	"15"	"0.002525"	"0.02419"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84271"	"1238.67815"	"1238.68030"	"-1.74"	"-0.00108"	"6/74"	"6"	"74"	"311528.191040039"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"24.4837"	"5063"	"5063"	"5034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"30.2"	""	"32.3"	""	"40.8"	""	"49.8"	"51.1"	""	"694"	"31"	"35.000"	"28.000"	"0.027122484819215"	"14"	"0.0001991"	"0.001997"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"413.56448"	"1238.67890"	"1238.68030"	"-1.13"	"-0.00047"	"8/74"	"8"	"74"	"56533177.3666992"	"HCD"	"MS2"	"13.57017"	"480.2"	"49.281"	"24.1999"	"4909"	"4909"	"4887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.6"	""	"653.0"	""	"600.3"	""	"798.7"	""	"994.1"	"1039.9"	""	"693"	"67"	"35.000"	"28.000"	"6.27629342092692E-06"	"20"	"0"	"6.913E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84332"	"1238.67937"	"1238.68030"	"-0.75"	"-0.00047"	"13/74"	"13"	"74"	"10095787.3782349"	"HCD"	"MS2"	"0"	"389.1"	"100.000"	"24.2137"	"4915"	"4915"	"4887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"368.3"	""	"495.9"	""	"452.4"	""	"698.4"	"0.8"	"804.8"	"878.2"	""	"695"	"47"	"35.000"	"28.000"	"0.000686996949938871"	"15"	"0"	"3.925E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84332"	"1238.67937"	"1238.68030"	"-0.75"	"-0.00047"	"13/74"	"13"	"74"	"11351061.0740967"	"HCD"	"MS2"	"0"	"418.7"	"100.000"	"24.1465"	"4925"	"4925"	"4898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"409.5"	""	"515.2"	""	"490.9"	""	"770.7"	""	"879.8"	"916.0"	""	"695"	"47"	"35.000"	"28.000"	"0.00068858064146727"	"15"	"0"	"0.0001017"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.84363"	"1238.67998"	"1238.68030"	"-0.26"	"-0.00016"	"6/74"	"6"	"74"	"334376.040771484"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"24.5507"	"5053"	"5053"	"5026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"28.0"	""	"28.7"	""	"44.6"	""	"55.4"	"53.9"	""	"685"	"27"	"35.000"	"28.000"	"0.0686531669372567"	"14"	"0.0001686"	"0.001795"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAGHDNR"	"[R].aGVLAGHDNR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; O35353; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus OX=10116 GN=Gnb4 PE=2 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"413.56534"	"1238.68146"	"1238.68030"	"0.94"	"0.00039"	"7/74"	"7"	"74"	"87461341.1416016"	"HCD"	"MS2"	"6.157904"	"167.0"	"13.132"	"24.1604"	"4931"	"4931"	"4914"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.0"	""	"226.3"	""	"211.8"	""	"279.7"	"0.7"	"346.7"	"343.1"	""	"702"	"55"	"35.000"	"28.000"	"0.00010772267179253"	"19"	"0"	"6.496E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADLHAVPR"	"[K].mADLHAVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"413.56662"	"1238.68531"	"1238.68769"	"-1.93"	"-0.00080"	"8/64"	"8"	"64"	"3019950.74383545"	"HCD"	"MS2"	"34.47718"	"76.8"	"100.000"	"42.9294"	"12483"	"12483"	"12459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.8"	""	"113.3"	""	"94.7"	""	"85.9"	""	"142.1"	"179.1"	""	"634"	"56"	"35.000"	"28.000"	"7.14593830252321E-05"	"27"	"0"	"9.387E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADLHAVPR"	"[K].mADLHAVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8103"	"0.0000"	"1"	"1"	"1"	"413.56665"	"1238.68540"	"1238.68769"	"-1.85"	"-0.00076"	"8/64"	"8"	"64"	"2289929.96429443"	"HCD"	"MS2"	"30.04164"	"63.8"	"100.000"	"43.0812"	"12511"	"12511"	"12489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.6"	""	"97.5"	""	"76.2"	""	"75.8"	""	"113.0"	"147.7"	""	"634"	"58"	"35.000"	"28.000"	"4.92106682156712E-05"	"27"	"0"	"3.047E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADLHAVPR"	"[K].mADLHAVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"413.56717"	"1238.68695"	"1238.68769"	"-0.60"	"-0.00025"	"10/64"	"10"	"64"	"2245238.22839355"	"HCD"	"MS2"	"11.94946"	"78.4"	"100.000"	"43.4171"	"12648"	"12648"	"12624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.7"	""	"103.3"	""	"102.6"	""	"103.3"	""	"164.4"	"170.9"	""	"639"	"28"	"35.000"	"28.000"	"0.0473664528204133"	"17"	"0.0001991"	"0.002148"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MADLHAVPR"	"[K].mADLHAVPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"413.56729"	"1238.68732"	"1238.68769"	"-0.30"	"-0.00012"	"8/64"	"8"	"64"	"2466499.28076172"	"HCD"	"MS2"	"14.30958"	"76.8"	"100.000"	"43.2309"	"12606"	"12606"	"12587"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.3"	""	"99.3"	""	"102.1"	""	"118.5"	""	"153.0"	"162.6"	""	"638"	"48"	"35.000"	"28.000"	"0.000556917266781641"	"23"	"0"	"0.0003348"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSATLSFLR"	"[K].dSATLSFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08430"	"UDP-glucuronosyltransferase 1-6 OS=Rattus norvegicus OX=10116 GN=Ugt1a6 PE=1 SV=1"	"P08430"	"UDP-glucuronosyltransferase 1-6 OS=Rattus norvegicus OX=10116 GN=Ugt1a6 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"619.85046"	"1238.69365"	"1238.69422"	"-0.46"	"-0.00028"	"6/74"	"6"	"74"	"203472.643066406"	"HCD"	"MS2"	"36.25165"	"15.5"	"100.000"	"89.3822"	"31312"	"31312"	"31291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"20.9"	""	"25.3"	""	"27.7"	""	"26.2"	"27.4"	""	"631"	"20"	"34.000"	"28.000"	"0.353182652233886"	"16"	"0.0009352"	"0.008272"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVHDLSVPR"	"[K].sVHDLSVPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"413.57285"	"1238.70398"	"1238.70545"	"-1.19"	"-0.00049"	"6/74"	"6"	"74"	"2653041.96624756"	"HCD"	"MS2"	"64.93281"	"53.5"	"100.000"	"38.6015"	"10732"	"10732"	"10708"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"71.0"	""	"71.5"	""	"104.3"	""	"112.0"	"95.2"	""	"573"	"43"	"34.000"	"27.000"	"0.00155641219972582"	"19"	"0"	"0.0002418"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVHDLSVPR"	"[K].sVHDLSVPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"P97521"	"Mitochondrial carnitine/acylcarnitine carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a20 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"413.57294"	"1238.70426"	"1238.70545"	"-0.96"	"-0.00040"	"6/74"	"6"	"74"	"3026793.4954834"	"HCD"	"MS2"	"46.2876"	"53.7"	"100.000"	"38.7234"	"10746"	"10746"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.4"	""	"65.9"	""	"66.5"	""	"95.2"	"0.7"	"116.0"	"102.6"	""	"572"	"35"	"34.000"	"27.000"	"0.0100315035950434"	"20"	"9.9E-05"	"0.0005634"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSENVK"	"[K].fGSENVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63603"	"Dedicator of cytokinesis protein 9 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dock9 PE=2 SV=2"	"Q63603"	"Dedicator of cytokinesis protein 9 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dock9 PE=2 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"619.85974"	"1238.71221"	"1238.71451"	"-1.86"	"-0.00115"	"6/54"	"6"	"54"	"688401.187988281"	"HCD"	"MS2"	"0"	"71.4"	"100.000"	"47.8209"	"14433"	"14433"	"14406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.5"	""	"89.6"	""	"103.3"	""	"119.5"	"0.5"	"134.1"	"132.4"	""	"483"	"22"	"33.000"	"26.000"	"0.136118493881968"	"19"	"0.001348"	"0.01096"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGSENVK"	"[K].fGSENVk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63603"	"Dedicator of cytokinesis protein 9 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dock9 PE=2 SV=2"	"Q63603"	"Dedicator of cytokinesis protein 9 (Fragment) OS=Rattus norvegicus OX=10116 GN=Dock9 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"619.86090"	"1238.71453"	"1238.71451"	"0.01"	"0.00001"	"9/54"	"9"	"54"	"584936.307434082"	"HCD"	"MS2"	"0"	"59.8"	"100.000"	"47.4849"	"14334"	"14334"	"14303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.8"	""	"76.1"	""	"80.9"	""	"92.0"	"1.5"	"121.7"	"108.0"	""	"475"	"21"	"33.000"	"26.000"	"0.171263026305939"	"21"	"0.00296"	"0.03158"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSASSVK"	"[K].tTSASSVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"619.87085"	"1238.73442"	"1238.73564"	"-0.98"	"-0.00061"	"7/66"	"7"	"66"	"2578717.65045166"	"HCD"	"MS2"	"14.7914"	"196.5"	"100.000"	"27.5434"	"6232"	"6232"	"6208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.3"	"2.8"	"175.6"	""	"181.3"	""	"592.8"	"1.8"	"452.2"	"313.0"	""	"406"	"47"	"33.000"	"26.000"	"0.000423151649268749"	""	"0.0001686"	"0.001958"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSASSVK"	"[K].tTSASSVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"619.87103"	"1238.73479"	"1238.73564"	"-0.69"	"-0.00042"	"7/66"	"7"	"66"	"3082079.47772217"	"HCD"	"MS2"	"26.07156"	"232.5"	"100.000"	"27.3107"	"6177"	"6177"	"6149"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"184.9"	""	"213.3"	""	"213.0"	""	"704.3"	""	"536.0"	"372.8"	""	"406"	"47"	"33.000"	"26.000"	"0.000401324836942708"	""	"0.0001686"	"0.001563"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSASSVK"	"[K].tTSASSVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"619.87146"	"1238.73564"	"1238.73564"	"0.00"	"0.00000"	"7/66"	"7"	"66"	"601186.042663574"	"HCD"	"MS2"	"0"	"50.1"	"100.000"	"27.8417"	"6351"	"6351"	"6337"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.8"	""	"58.9"	""	"68.3"	""	"103.4"	""	"104.3"	"86.8"	""	"391"	"21"	"32.000"	"25.000"	"0.144592831273886"	"19"	"0.0001991"	"0.002532"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSASSVK"	"[K].tTSASSVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.87158"	"1238.73589"	"1238.73564"	"0.20"	"0.00012"	"6/66"	"6"	"66"	"544342.40447998"	"HCD"	"MS2"	"19.06568"	"46.2"	"100.000"	"27.6251"	"6304"	"6304"	"6284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"61.7"	""	"60.9"	""	"85.3"	"0.7"	"95.2"	"86.9"	""	"391"	"13"	"32.000"	"25.000"	"0.993451710205897"	"13"	"0.0001991"	"0.005603"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"620.32941"	"1239.65154"	"1239.65308"	"-1.25"	"-0.00077"	"9/82"	"9"	"82"	"3666609.61352539"	"HCD"	"MS2"	"38.29384"	"235.7"	"100.000"	"48.7459"	"14844"	"14844"	"14830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"368.4"	""	"317.7"	""	"339.8"	""	"379.9"	""	"420.8"	"405.8"	""	"574"	"39"	"34.000"	"27.000"	"0.00368877271403818"	"20"	"0"	"4.279E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"620.32953"	"1239.65178"	"1239.65308"	"-1.05"	"-0.00065"	"9/82"	"9"	"82"	"855178.686218262"	"HCD"	"MS2"	"4.479768"	"65.0"	"100.000"	"49.3497"	"15089"	"15089"	"15066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.0"	""	"76.6"	""	"97.8"	""	"97.9"	"1.8"	"125.7"	"127.7"	""	"580"	"44"	"34.000"	"27.000"	"0.001277609104169"	"19"	"0"	"7.426E-06"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"620.32959"	"1239.65190"	"1239.65308"	"-0.95"	"-0.00059"	"8/82"	"8"	"82"	"9271828.51208496"	"HCD"	"MS2"	"6.63584"	"380.4"	"91.336"	"49.0278"	"14958"	"14958"	"14943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"632.3"	""	"557.6"	""	"588.5"	""	"543.3"	"0.6"	"604.0"	"670.2"	""	"582"	"50"	"34.000"	"27.000"	"0.000306826586849856"	"18"	"0"	"6.918E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"620.32965"	"1239.65203"	"1239.65308"	"-0.85"	"-0.00053"	"9/82"	"9"	"82"	"3830132.36315918"	"HCD"	"MS2"	"27.70188"	"229.1"	"100.000"	"49.0735"	"14942"	"14942"	"14922"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"380.1"	""	"313.5"	""	"328.6"	""	"353.2"	""	"378.7"	"414.4"	""	"583"	"40"	"34.000"	"27.000"	"0.00313067913697473"	"19"	"0"	"5.066E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"620.33002"	"1239.65276"	"1239.65308"	"-0.26"	"-0.00016"	"8/82"	"8"	"82"	"8201401.67767334"	"HCD"	"MS2"	"8.225306"	"389.1"	"100.000"	"49.3744"	"15065"	"15065"	"15052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"626.4"	""	"570.6"	""	"626.7"	""	"529.4"	""	"642.0"	"687.3"	""	"562"	"51"	"34.000"	"27.000"	"0.000216125653720537"	"20"	"0"	"6.18E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDYGSLSGR"	"[R].vGDYGSLSGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"620.33014"	"1239.65300"	"1239.65308"	"-0.06"	"-0.00004"	"8/82"	"8"	"82"	"933200.779418945"	"HCD"	"MS2"	"0"	"68.2"	"100.000"	"49.6661"	"15183"	"15183"	"15164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.5"	""	"83.8"	""	"97.0"	""	"106.1"	""	"128.7"	"130.2"	""	"562"	"38"	"34.000"	"27.000"	"0.00437226342481026"	"20"	"0"	"1.827E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"620.34033"	"1239.67339"	"1239.67421"	"-0.66"	"-0.00041"	"8/86"	"8"	"86"	"4428505.52191162"	"HCD"	"MS2"	"3.404831"	"192.3"	"100.000"	"21.3353"	"3848"	"3848"	"3827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.3"	""	"232.6"	""	"182.2"	""	"447.2"	""	"446.7"	"325.2"	""	"563"	"53"	"34.000"	"27.000"	"0.000133192079397657"	"22"	"0"	"2.064E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSTGTSTTR"	"[K].vTSTGTSTTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"620.34045"	"1239.67363"	"1239.67421"	"-0.47"	"-0.00029"	"8/86"	"8"	"86"	"4585971.56408691"	"HCD"	"MS2"	"0"	"201.3"	"100.000"	"21.3655"	"3823"	"3823"	"3801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.6"	""	"240.4"	""	"174.9"	""	"491.4"	""	"449.1"	"345.1"	""	"569"	"49"	"34.000"	"27.000"	"0.000357340524671192"	"21"	"0"	"2.992E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVDAMK"	"[K].tTVDAmk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"620.35449"	"1239.70171"	"1239.70190"	"-0.15"	"-0.00009"	"6/54"	"6"	"54"	"1058594.38061523"	"HCD"	"MS2"	"0"	"87.9"	"100.000"	"32.0268"	"8069"	"8069"	"8052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.7"	""	"103.6"	""	"115.7"	""	"186.6"	""	"160.4"	"156.8"	""	"513"	"31"	"34.000"	"27.000"	"0.0203745192206778"	"19"	"0.0042"	"0.0453"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVDAMK"	"[K].tTVDAmk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"620.35474"	"1239.70220"	"1239.70190"	"0.24"	"0.00015"	"6/54"	"6"	"54"	"1057448.42468262"	"HCD"	"MS2"	"0"	"84.6"	"100.000"	"32.0982"	"8061"	"8061"	"8044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.6"	""	"113.1"	""	"105.2"	""	"178.9"	""	"150.9"	"147.1"	""	"515"	"33"	"34.000"	"27.000"	"0.0139886960359302"	"20"	"0.008718"	"0.1104"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLEELTR"	"[R].iHLEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D7"	"Xaa-Pro dipeptidase OS=Rattus norvegicus OX=10116 GN=Pepd PE=2 SV=1"	"Q5I0D7"	"Xaa-Pro dipeptidase OS=Rattus norvegicus OX=10116 GN=Pepd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.91214"	"1239.72187"	"1239.72585"	"-3.22"	"-0.00133"	"6/62"	"6"	"62"	"923677.196533203"	"HCD"	"MS2"	"20.50196"	"22.8"	"100.000"	"56.7186"	"18080"	"18080"	"18063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.1"	""	"27.3"	""	"32.8"	""	"39.7"	"1.8"	"40.0"	"42.0"	""	"422"	"21"	"33.000"	"26.000"	"0.157138446494164"	"14"	"0.0009964"	"0.008466"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHLEELTR"	"[R].iHLEELTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D7"	"Xaa-Pro dipeptidase OS=Rattus norvegicus OX=10116 GN=Pepd PE=2 SV=1"	"Q5I0D7"	"Xaa-Pro dipeptidase OS=Rattus norvegicus OX=10116 GN=Pepd PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"413.91260"	"1239.72324"	"1239.72585"	"-2.11"	"-0.00087"	"9/62"	"9"	"62"	"1012770.30706787"	"HCD"	"MS2"	"55.09252"	"23.7"	"100.000"	"57.0499"	"18180"	"18180"	"18156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"26.6"	""	"32.7"	""	"47.2"	"2.9"	"47.8"	"33.1"	""	"414"	"26"	"33.000"	"26.000"	"0.0511646898018339"	"14"	"0.0001991"	"0.004069"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIEHIK"	"[R].aAIEHIk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"413.93192"	"1239.78119"	"1239.78253"	"-1.08"	"-0.00045"	"5/48"	"5"	"48"	"3104616.31365967"	"HCD"	"MS2"	"8.588593"	"169.4"	"100.000"	"38.8956"	"10852"	"10852"	"10830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.3"	""	"253.5"	""	"240.3"	""	"281.8"	""	"250.7"	"340.2"	""	"143"	"21"	"28.000"	"21.000"	"0.0534941192865475"	"18"	"0.001316"	"0.01044"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIEHIK"	"[R].aAIEHIk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"413.93213"	"1239.78183"	"1239.78253"	"-0.56"	"-0.00023"	"5/48"	"5"	"48"	"4946990.33453369"	"HCD"	"MS2"	"19.77874"	"242.4"	"100.000"	"38.9417"	"10835"	"10835"	"10813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"338.9"	""	"361.5"	""	"342.9"	""	"396.1"	""	"369.8"	"485.2"	""	"143"	"25"	"28.000"	"21.000"	"0.0249635325567189"	"19"	"0.002419"	"0.02264"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEWFATR"	"[K].sDEWFATR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"620.81134"	"1240.61540"	"1240.61597"	"-0.45"	"-0.00028"	"6/68"	"6"	"68"	"1213446.66381836"	"HCD"	"MS2"	"5.67821"	"71.5"	"100.000"	"67.3817"	"22407"	"22407"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.3"	""	"72.6"	""	"92.8"	""	"134.5"	""	"146.7"	"147.6"	""	"432"	"48"	"33.000"	"26.000"	"0.000328438266422219"	""	"9.9E-05"	"0.0007098"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDEWFATR"	"[K].sDEWFATR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"620.81134"	"1240.61540"	"1240.61597"	"-0.45"	"-0.00028"	"6/68"	"6"	"68"	"1347554.24810791"	"HCD"	"MS2"	"14.86031"	"73.8"	"100.000"	"67.3875"	"22378"	"22378"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.9"	""	"74.2"	""	"93.7"	""	"142.9"	""	"151.4"	"148.0"	""	"432"	"45"	"33.000"	"26.000"	"0.000733590588795283"	"25"	"9.9E-05"	"0.0008143"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"620.83087"	"1240.65447"	"1240.65572"	"-1.01"	"-0.00063"	"7/72"	"7"	"72"	"1107072.37573242"	"HCD"	"MS2"	"0"	"68.6"	"100.000"	"60.3425"	"19554"	"19554"	"19537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.2"	""	"87.5"	""	"71.1"	""	"107.9"	""	"153.9"	"162.7"	""	"569"	"30"	"34.000"	"27.000"	"0.0304146113138846"	"17"	"0.0001686"	"0.001875"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"620.83118"	"1240.65508"	"1240.65572"	"-0.52"	"-0.00032"	"7/72"	"7"	"72"	"2121581.24645996"	"HCD"	"MS2"	"4.634157"	"120.8"	"100.000"	"60.0431"	"19432"	"19432"	"19413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.2"	""	"157.0"	""	"133.5"	""	"183.9"	""	"274.8"	"287.5"	""	"577"	"34"	"34.000"	"27.000"	"0.0122502744198511"	"18"	"0.0001991"	"0.002716"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"620.83130"	"1240.65532"	"1240.65572"	"-0.32"	"-0.00020"	"6/72"	"6"	"72"	"933386.943908691"	"HCD"	"MS2"	"12.32635"	"65.5"	"100.000"	"59.7437"	"19311"	"19311"	"19288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.3"	""	"75.5"	""	"73.4"	""	"113.6"	""	"141.3"	"150.8"	""	"577"	"32"	"34.000"	"27.000"	"0.0202369853594162"	"17"	"0.0005161"	"0.006962"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"620.83136"	"1240.65544"	"1240.65572"	"-0.23"	"-0.00014"	"6/72"	"6"	"72"	"920568.988647461"	"HCD"	"MS2"	"0"	"62.6"	"100.000"	"60.5180"	"19592"	"19592"	"19572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.5"	""	"73.0"	""	"69.3"	""	"103.7"	""	"144.8"	"143.8"	""	"570"	"29"	"34.000"	"27.000"	"0.0352245018531686"	"15"	"0.0001686"	"0.001352"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"620.83136"	"1240.65544"	"1240.65572"	"-0.23"	"-0.00014"	"7/72"	"7"	"72"	"1085516.59533691"	"HCD"	"MS2"	"12.24686"	"69.8"	"100.000"	"59.9142"	"19347"	"19347"	"19321"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.3"	""	"72.1"	""	"76.2"	""	"113.7"	"0.8"	"160.7"	"163.5"	""	"570"	"32"	"34.000"	"27.000"	"0.0187432483646295"	"17"	"9.9E-05"	"0.0009324"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQTSEFIR"	"[K].mQTSEFIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"620.83154"	"1240.65581"	"1240.65572"	"0.07"	"0.00004"	"7/72"	"7"	"72"	"2106021.69281006"	"HCD"	"MS2"	"3.626958"	"113.8"	"100.000"	"60.2141"	"19468"	"19468"	"19451"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.4"	""	"143.1"	""	"118.9"	""	"182.8"	""	"263.9"	"274.0"	""	"570"	"32"	"34.000"	"27.000"	"0.0194914819475207"	"17"	"0.0001991"	"0.003135"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"620.84937"	"1240.69145"	"1240.69377"	"-1.87"	"-0.00116"	"6/58"	"6"	"58"	"3809951.18011475"	"HCD"	"MS2"	"0"	"328.2"	"100.000"	"32.4468"	"8202"	"8202"	"8180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"706.1"	""	"452.0"	""	"295.1"	""	"572.9"	""	"508.8"	"568.3"	""	"533"	"32"	"34.000"	"27.000"	"0.015477371726943"	"22"	"0.003317"	"0.03655"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"620.84991"	"1240.69255"	"1240.69377"	"-0.98"	"-0.00061"	"6/58"	"6"	"58"	"6019673.40661621"	"HCD"	"MS2"	"0"	"481.9"	"100.000"	"32.6400"	"8316"	"8316"	"8299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"965.5"	""	"600.9"	""	"437.7"	""	"815.8"	""	"851.5"	"896.9"	""	"536"	"30"	"34.000"	"27.000"	"0.0284534409329258"	"21"	"0.004213"	"0.04719"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"620.85004"	"1240.69280"	"1240.69377"	"-0.79"	"-0.00049"	"6/58"	"6"	"58"	"4286389.8637085"	"HCD"	"MS2"	"0"	"355.4"	"100.000"	"32.3527"	"8200"	"8200"	"8182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"802.4"	""	"455.3"	""	"303.5"	""	"626.5"	""	"582.5"	"591.6"	""	"536"	"33"	"34.000"	"27.000"	"0.0128272864742467"	"21"	"0.002628"	"0.0274"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQYTDK"	"[K].aGQYTDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"620.85010"	"1240.69292"	"1240.69377"	"-0.69"	"-0.00043"	"6/58"	"6"	"58"	"7217476.99273682"	"HCD"	"MS2"	"0"	"568.9"	"100.000"	"32.7316"	"8315"	"8315"	"8298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1186.7"	""	"707.5"	""	"509.8"	""	"944.6"	""	"980.5"	"1065.5"	""	"536"	"30"	"34.000"	"27.000"	"0.0289824298947847"	"21"	"0.005426"	"0.06867"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFVHELR"	"[R].nPFVHELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"3"	"3"	"0.7115"	"0.0000"	"1"	"1"	"1"	"414.23752"	"1240.69800"	"1240.69997"	"-1.59"	"-0.00066"	"7/70"	"7"	"70"	"2612696.4979248"	"HCD"	"MS2"	"31.54455"	"46.9"	"100.000"	"46.1807"	"13774"	"13774"	"13745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.0"	""	"58.5"	""	"65.4"	""	"81.2"	""	"88.2"	"90.8"	""	"552"	"52"	"34.000"	"27.000"	"0.000164024635777898"	""	"9.9E-05"	"0.0009543"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPFVHELR"	"[R].nPFVHELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"414.23846"	"1240.70084"	"1240.69997"	"0.70"	"0.00029"	"7/70"	"7"	"70"	"2719823.53881836"	"HCD"	"MS2"	"28.7778"	"52.4"	"100.000"	"45.8667"	"13680"	"13680"	"13653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.2"	""	"66.0"	""	"68.8"	""	"93.7"	""	"94.9"	"101.0"	""	"493"	"55"	"33.000"	"26.000"	"8.66596485902256E-05"	"24"	"9.9E-05"	"0.0005764"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASGGDYWR"	"[K].tASGGDYWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"1"	"621.30847"	"1241.60967"	"1241.61122"	"-1.25"	"-0.00077"	"7/74"	"7"	"74"	"1698617.98034668"	"HCD"	"MS2"	"46.224"	"126.2"	"100.000"	"42.4397"	"12249"	"12249"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.2"	""	"157.5"	""	"150.2"	""	"171.9"	""	"276.1"	"261.6"	""	"361"	"11"	"32.000"	"25.000"	"1.51522527566751"	"23"	"0.0001991"	"0.005234"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YETELAMR"	"[K].yETELAMR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"621.32135"	"1241.63542"	"1241.63974"	"-3.48"	"-0.00216"	"6/60"	"6"	"60"	"1152187.08258057"	"HCD"	"MS2"	"45.02338"	"65.3"	"100.000"	"56.5994"	"18032"	"18032"	"18011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.8"	""	"71.9"	""	"87.1"	""	"104.8"	"1.7"	"133.4"	"126.1"	""	"470"	"5"	"33.000"	"26.000"	"7.16255322562575"	"17"	"0.004234"	"0.04843"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGYSEK"	"[K].aEGYSEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"Q923V4"	"F-box only protein 6 OS=Rattus norvegicus OX=10116 GN=Fbxo6 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"621.34045"	"1241.67363"	"1241.67779"	"-3.35"	"-0.00208"	"6/56"	"6"	"56"	"1400985.51885986"	"HCD"	"MS2"	"0"	"107.5"	"100.000"	"31.4649"	"7843"	"7843"	"7822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.8"	""	"129.5"	""	"183.8"	""	"142.2"	"1.3"	"199.7"	"193.0"	""	"515"	"28"	"34.000"	"27.000"	"0.0375644672020902"	"26"	"0.001488"	"0.01208"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYVYNVAR"	"[R].qYVYNVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"621.34497"	"1241.68266"	"1241.68399"	"-1.07"	"-0.00066"	"6/72"	"6"	"72"	"3048477.49914551"	"HCD"	"MS2"	"3.110277"	"180.9"	"100.000"	"45.7022"	"13578"	"13578"	"13557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"278.2"	""	"245.9"	""	"241.6"	""	"282.3"	""	"331.9"	"337.5"	""	"520"	"41"	"34.000"	"27.000"	"0.00215761199553749"	"20"	"0.0001991"	"0.002956"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYVYNVAR"	"[R].qYVYNVAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"621.34497"	"1241.68266"	"1241.68399"	"-1.07"	"-0.00066"	"6/72"	"6"	"72"	"3283697.53320313"	"HCD"	"MS2"	"0"	"188.4"	"100.000"	"45.4387"	"13505"	"13505"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"301.0"	""	"252.7"	""	"264.1"	""	"298.4"	""	"340.0"	"329.1"	""	"520"	"41"	"34.000"	"27.000"	"0.00207956906301827"	"20"	"0.0001991"	"0.003331"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPINTK"	"[K].nPPINTk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"621.38434"	"1241.76140"	"1241.76179"	"-0.32"	"-0.00020"	"6/60"	"6"	"60"	"1037999.71520996"	"HCD"	"MS2"	"0"	"74.4"	"100.000"	"37.3571"	"10227"	"10227"	"10200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.0"	""	"97.0"	""	"103.4"	""	"132.1"	""	"130.8"	"142.2"	""	"303"	"28"	"31.000"	"24.000"	"0.0226679701898307"	"18"	"0.007069"	"0.08895"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPINTK"	"[K].nPPINTk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"621.38446"	"1241.76164"	"1241.76179"	"-0.12"	"-0.00007"	"6/60"	"6"	"60"	"2988892.32849121"	"HCD"	"MS2"	"0"	"172.6"	"100.000"	"37.6498"	"10343"	"10343"	"10328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.0"	""	"228.9"	""	"222.3"	""	"292.6"	"1.1"	"311.4"	"317.3"	""	"301"	"30"	"31.000"	"24.000"	"0.0165781666085983"	"18"	"0.0009352"	"0.00804"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPINTK"	"[K].nPPINTk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"621.38452"	"1241.76177"	"1241.76179"	"-0.02"	"-0.00001"	"6/60"	"6"	"60"	"2861339.47796631"	"HCD"	"MS2"	"0"	"169.0"	"100.000"	"37.7604"	"10352"	"10352"	"10340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.2"	""	"219.6"	""	"219.3"	""	"273.1"	"1.1"	"327.7"	"305.0"	""	"301"	"27"	"31.000"	"24.000"	"0.0288095516715674"	"18"	"0.00192"	"0.01603"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPINTK"	"[K].nPPINTk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"Q4KLF8"	"Actin-related protein 2/3 complex subunit 5 OS=Rattus norvegicus OX=10116 GN=Arpc5 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"621.38489"	"1241.76250"	"1241.76179"	"0.57"	"0.00035"	"6/60"	"6"	"60"	"479797.456176758"	"HCD"	"MS2"	"0"	"44.8"	"100.000"	"38.0291"	"10498"	"10498"	"10471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.7"	""	"62.5"	""	"51.3"	""	"79.4"	"1.5"	"86.7"	"85.5"	""	"308"	"32"	"31.000"	"24.000"	"0.0101046371010648"	"18"	"0.002711"	"0.02848"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"621.80615"	"1242.60503"	"1242.60647"	"-1.16"	"-0.00072"	"8/88"	"8"	"88"	"1904113.26989746"	"HCD"	"MS2"	"26.95444"	"112.2"	"100.000"	"50.2618"	"15426"	"15426"	"15398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.7"	""	"114.1"	""	"97.4"	""	"251.3"	"1.0"	"236.7"	"217.1"	""	"364"	"42"	"32.000"	"25.000"	"0.00102818529415839"	"22"	"0"	"3.004E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"621.80621"	"1242.60515"	"1242.60647"	"-1.06"	"-0.00066"	"8/88"	"8"	"88"	"3190291.0682373"	"HCD"	"MS2"	"8.359793"	"169.6"	"100.000"	"49.9869"	"15349"	"15349"	"15323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.8"	""	"158.7"	""	"131.5"	""	"350.5"	""	"362.0"	"359.3"	""	"368"	"43"	"32.000"	"25.000"	"0.000983598421290427"	"23"	"0"	"4.942E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"621.80652"	"1242.60576"	"1242.60647"	"-0.57"	"-0.00035"	"8/88"	"8"	"88"	"22337565.3961182"	"HCD"	"MS2"	"0"	"469.5"	"43.981"	"50.2680"	"15464"	"15464"	"15447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"699.8"	""	"387.7"	""	"331.0"	""	"995.7"	""	"1027.0"	"1023.8"	""	"359"	"42"	"32.000"	"25.000"	"0.00126492405879603"	"21"	"0"	"6.09E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNFGFGDSR"	"[R].gGNFGFGDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"621.80670"	"1242.60613"	"1242.60647"	"-0.27"	"-0.00017"	"8/88"	"8"	"88"	"20510364.6330566"	"HCD"	"MS2"	"0"	"552.5"	"55.631"	"50.5475"	"15543"	"15543"	"15526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"790.0"	""	"453.4"	""	"412.8"	""	"1181.8"	"1.5"	"1247.5"	"1166.7"	""	"361"	"42"	"32.000"	"25.000"	"0.00126612681364805"	"20"	"0"	"5.508E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPGFYTTR"	"[K].dGPGFYTTR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"621.81885"	"1242.63042"	"1242.63162"	"-0.96"	"-0.00060"	"7/78"	"7"	"78"	"2498865.8538208"	"HCD"	"MS2"	"0"	"135.8"	"100.000"	"43.5343"	"12696"	"12696"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"232.1"	""	"183.3"	""	"164.7"	""	"216.6"	""	"232.3"	"256.5"	""	"434"	"41"	"33.000"	"26.000"	"0.00184696954289916"	"22"	"0"	"0.0003765"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPGFYTTR"	"[K].dGPGFYTTR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"621.81921"	"1242.63115"	"1242.63162"	"-0.38"	"-0.00023"	"6/78"	"6"	"78"	"2513202.4407959"	"HCD"	"MS2"	"6.228841"	"131.2"	"100.000"	"43.3575"	"12658"	"12658"	"12635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.4"	""	"171.6"	""	"170.0"	""	"211.7"	"0.6"	"231.1"	"223.8"	""	"429"	"33"	"33.000"	"26.000"	"0.0116795819034699"	"23"	"9.9E-05"	"0.0004337"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYDNLYGR"	"[R].iYDNLYGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"621.83661"	"1242.66594"	"1242.66800"	"-1.66"	"-0.00103"	"5/64"	"5"	"64"	"594359.810913086"	"HCD"	"MS2"	"14.83035"	"37.0"	"100.000"	"68.5715"	"22859"	"22859"	"22828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.5"	""	"55.9"	""	"51.1"	""	"61.5"	"0.4"	"59.7"	"58.6"	""	"536"	"13"	"34.000"	"27.000"	"1.25353017864969"	"15"	"0.00212"	"0.01957"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYDNLYGR"	"[R].iYDNLYGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.83746"	"1242.66765"	"1242.66800"	"-0.28"	"-0.00018"	"5/64"	"5"	"64"	"1082101.09692383"	"HCD"	"MS2"	"1.8977"	"62.8"	"100.000"	"68.8595"	"22974"	"22974"	"22955"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.6"	""	"118.8"	""	"79.9"	""	"83.3"	"1.7"	"106.2"	"104.5"	""	"518"	"23"	"34.000"	"27.000"	"0.128617411255637"	"14"	"0.0001991"	"0.005409"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYDNLYGR"	"[R].iYDNLYGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.83777"	"1242.66826"	"1242.66800"	"0.21"	"0.00013"	"5/64"	"5"	"64"	"1188736.23181152"	"HCD"	"MS2"	"2.200175"	"69.0"	"100.000"	"68.8861"	"23019"	"23019"	"23000"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.2"	""	"121.1"	""	"95.6"	""	"104.7"	"0.0"	"116.3"	"109.4"	""	"513"	"18"	"34.000"	"27.000"	"0.378518725785267"	"14"	"0.001261"	"0.01023"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYDNLYGR"	"[R].iYDNLYGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"621.83807"	"1242.66887"	"1242.66800"	"0.70"	"0.00043"	"10/64"	"10"	"64"	"408065.944946289"	"HCD"	"MS2"	"33.13218"	"28.9"	"100.000"	"68.5657"	"22889"	"22889"	"22858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.2"	""	"41.2"	""	"38.9"	""	"50.3"	"0.1"	"47.0"	"55.7"	""	"518"	"9"	"34.000"	"27.000"	"3.18639611640407"	"14"	"0.002711"	"0.02898"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTLPNGER"	"[K].lLTLPnGER.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"621.86548"	"1242.72368"	"1242.72552"	"-1.48"	"-0.00092"	"5/80"	"5"	"80"	"303020.955810547"	"HCD"	"MS2"	"32.96706"	"17.8"	"100.000"	"92.9154"	"32731"	"32731"	"32707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"23.5"	""	"26.2"	""	"33.2"	""	"33.0"	"31.6"	""	"483"	"14"	"33.000"	"26.000"	"0.864802895602865"	"18"	"0.002588"	"0.02658"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEAPLR"	"[R].sILDEAPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"621.86597"	"1242.72466"	"1242.72552"	"-0.69"	"-0.00043"	"7/72"	"7"	"72"	"893967.284057617"	"HCD"	"MS2"	"36.61079"	"40.9"	"100.000"	"85.0216"	"29552"	"29552"	"29531"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.4"	""	"56.8"	""	"57.8"	""	"63.1"	"1.2"	"69.1"	"69.9"	""	"482"	"23"	"33.000"	"26.000"	"0.133357376320993"	"20"	"9.9E-05"	"0.0004637"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTLPNGER"	"[K].lLTLPnGER.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"621.86609"	"1242.72490"	"1242.72552"	"-0.50"	"-0.00031"	"12/80"	"12"	"80"	"2783715.63317871"	"HCD"	"MS2"	"25.0643"	"87.8"	"100.000"	"92.4554"	"32549"	"32549"	"32529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.8"	""	"102.9"	""	"114.7"	""	"157.1"	"2.3"	"171.8"	"177.9"	""	"482"	"37"	"33.000"	"26.000"	"0.00466677693311132"	"25"	"0"	"8.374E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTLPNGER"	"[K].lLTLPnGER.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"621.86621"	"1242.72515"	"1242.72552"	"-0.30"	"-0.00019"	"12/80"	"12"	"80"	"2895344.41552734"	"HCD"	"MS2"	"26.8428"	"87.5"	"100.000"	"92.5162"	"32538"	"32538"	"32520"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.8"	""	"100.0"	""	"117.0"	""	"150.7"	"0.2"	"177.1"	"176.7"	""	"482"	"37"	"33.000"	"26.000"	"0.00481966710581491"	"23"	"9.9E-05"	"0.0008237"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEAPLR"	"[R].sILDEAPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"621.86627"	"1242.72527"	"1242.72552"	"-0.20"	"-0.00013"	"7/72"	"7"	"72"	"685811.073974609"	"HCD"	"MS2"	"42.43922"	"34.7"	"100.000"	"84.9785"	"29505"	"29505"	"29487"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.2"	""	"44.4"	""	"49.2"	""	"58.0"	""	"59.5"	"58.0"	""	"459"	"30"	"33.000"	"26.000"	"0.0210757330892982"	"21"	"0"	"0.0002787"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDLPLK"	"[R].aQDLPLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"621.89484"	"1242.78240"	"1242.78219"	"0.16"	"0.00010"	"6/58"	"6"	"58"	"933398.049316406"	"HCD"	"MS2"	"48.18723"	"49.6"	"100.000"	"63.5903"	"20871"	"20871"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.1"	""	"50.5"	""	"58.9"	""	"92.5"	""	"105.6"	"94.2"	""	"317"	"15"	"32.000"	"25.000"	"0.47866234768372"	"24"	"0.001488"	"0.01242"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"622.32501"	"1243.64275"	"1243.64416"	"-1.13"	"-0.00070"	"6/62"	"6"	"62"	"298325.563171387"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"97.9407"	"34731"	"34731"	"34707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"11.4"	""	"18.6"	""	"26.3"	""	"33.0"	"20.5"	""	"485"	"45"	"33.000"	"26.000"	"0.000723955285087606"	"16"	"0.003357"	"0.0379"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"622.32501"	"1243.64275"	"1243.64416"	"-1.13"	"-0.00070"	"6/62"	"6"	"62"	"404937.805053711"	"HCD"	"MS2"	"6.422375"	"14.7"	"100.000"	"98.0170"	"34793"	"34793"	"34773"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"13.5"	""	"20.3"	""	"31.6"	""	"28.0"	"31.5"	""	"485"	"42"	"33.000"	"26.000"	"0.00138264836028081"	"16"	"0.002525"	"0.0243"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVGGYTCQK"	"[K].iVGGYTcQK.[N]"	"N-Term(TMT6plex); C7(Methylthio)"	"1"	"1"	"P08426"	"Cationic trypsin-3 OS=Rattus norvegicus OX=10116 GN=Try3 PE=2 SV=1"	"P08426"	"Cationic trypsin-3 OS=Rattus norvegicus OX=10116 GN=Try3 PE=2 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"622.32501"	"1243.64275"	"1243.63763"	"4.11"	"0.00256"	"7/66"	"7"	"66"	"448329.068725586"	"HCD"	"MS2"	"43.04149"	"15.1"	"100.000"	"99.0462"	"35177"	"35177"	"35160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.9"	""	"19.1"	""	"23.6"	""	"27.0"	""	"31.5"	"29.3"	""	"485"	"23"	"33.000"	"26.000"	"0.121818077959179"	""	"0.002588"	"0.02641"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"622.32538"	"1243.64348"	"1243.64416"	"-0.54"	"-0.00034"	"6/62"	"6"	"62"	"239784.254272461"	"HCD"	"MS2"	"49.95621"	"13.2"	"100.000"	"100.2282"	"35685"	"35685"	"35665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"14.0"	""	"26.3"	""	"15.5"	""	"24.7"	"28.1"	""	"505"	"48"	"34.000"	"27.000"	"0.000435774067727526"	"20"	"0.001596"	"0.01288"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"622.32544"	"1243.64360"	"1243.64416"	"-0.45"	"-0.00028"	"6/62"	"6"	"62"	"242731.897705078"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"98.7925"	"35105"	"35105"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"11.0"	""	"15.9"	""	"23.1"	""	"21.2"	"22.4"	""	"505"	"49"	"34.000"	"27.000"	"0.000348547026812228"	"21"	"0.003818"	"0.04129"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"622.32544"	"1243.64360"	"1243.64416"	"-0.45"	"-0.00028"	"6/62"	"6"	"62"	"774147.376159668"	"HCD"	"MS2"	"23.35716"	"23.5"	"100.000"	"98.4320"	"34929"	"34929"	"34911"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"26.9"	""	"26.3"	""	"57.4"	"1.2"	"40.2"	"43.8"	""	"505"	"45"	"34.000"	"27.000"	"0.000741756537120286"	"19"	"0.000264"	"0.006042"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"622.32556"	"1243.64385"	"1243.64416"	"-0.25"	"-0.00016"	"5/62"	"5"	"62"	"265734.302368164"	"HCD"	"MS2"	"39.72248"	"13.9"	"100.000"	"102.0169"	"36383"	"36383"	"36355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"23.3"	""	"20.8"	""	"28.6"	""	"23.7"	"24.2"	""	"505"	"19"	"34.000"	"27.000"	"0.288576779534417"	"19"	"0.009005"	"0.1165"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"622.32574"	"1243.64421"	"1243.64416"	"0.05"	"0.00003"	"6/62"	"6"	"62"	"275134.026672363"	"HCD"	"MS2"	"20.62842"	"12.3"	"100.000"	"98.7483"	"35057"	"35057"	"35037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"11.9"	""	"16.8"	""	"26.3"	""	"25.1"	"25.1"	""	"501"	"45"	"33.000"	"26.000"	"0.000846852414695985"	"18"	"0.0001991"	"0.005134"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"622.32574"	"1243.64421"	"1243.64416"	"0.05"	"0.00003"	"5/62"	"5"	"62"	"257769.050292969"	"HCD"	"MS2"	"35.68014"	"13.3"	"100.000"	"102.1533"	"36462"	"36462"	"36443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"14.2"	""	"19.4"	""	"21.4"	""	"25.2"	"25.1"	""	"501"	"30"	"33.000"	"26.000"	"0.0228458715258656"	"15"	"0.008135"	"0.1042"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"622.32587"	"1243.64446"	"1243.64416"	"0.24"	"0.00015"	"6/62"	"6"	"62"	"170914.577331543"	"HCD"	"MS2"	"16.31089"	"9.6"	"100.000"	"104.0360"	"37212"	"37212"	"37195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"13.1"	""	"15.5"	""	"16.4"	""	"17.4"	"18.0"	""	"501"	"32"	"33.000"	"26.000"	"0.0145146888454934"	"19"	"0.007601"	"0.09691"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"622.32593"	"1243.64458"	"1243.64416"	"0.34"	"0.00021"	"6/62"	"6"	"62"	"691998.629211426"	"HCD"	"MS2"	"14.68932"	"23.0"	"100.000"	"98.4649"	"34972"	"34972"	"34951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"25.2"	""	"30.0"	""	"54.3"	""	"46.2"	"41.8"	""	"501"	"49"	"33.000"	"26.000"	"0.000335589010200197"	"21"	"0.0001991"	"0.005258"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"622.32605"	"1243.64482"	"1243.64416"	"0.54"	"0.00033"	"6/62"	"6"	"62"	"272120.863586426"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"101.5513"	"36194"	"36194"	"36164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"13.8"	""	"21.4"	""	"22.6"	""	"25.4"	"29.2"	""	"500"	"42"	"33.000"	"26.000"	"0.00166318289050435"	"16"	"0.007104"	"0.09117"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTDYLMK"	"[R].DLTDYLmk.[I]"	"M7(Oxidation); K8(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"622.32617"	"1243.64507"	"1243.64416"	"0.73"	"0.00046"	"6/62"	"6"	"62"	"278564.514343262"	"HCD"	"MS2"	"43.84014"	"11.1"	"100.000"	"103.1639"	"36847"	"36847"	"36823"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"13.9"	""	"13.7"	""	"21.5"	""	"21.2"	"21.9"	""	"500"	"19"	"33.000"	"26.000"	"0.292374847754968"	"17"	"0.009312"	"0.1209"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDTDGSK"	"[K].yDTDGSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"622.33118"	"1243.65508"	"1243.65705"	"-1.59"	"-0.00099"	"12/56"	"12"	"56"	"2534155.14837646"	"HCD"	"MS2"	"10.80367"	"225.1"	"100.000"	"31.8873"	"7977"	"7977"	"7953"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"367.1"	""	"234.3"	""	"252.8"	""	"349.6"	""	"484.7"	"464.9"	""	"532"	"23"	"34.000"	"27.000"	"0.137366754226371"	"17"	"0.002673"	"0.02813"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDTDGSK"	"[K].yDTDGSk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"622.33173"	"1243.65618"	"1243.65705"	"-0.71"	"-0.00044"	"12/56"	"12"	"56"	"2548021.9899292"	"HCD"	"MS2"	"18.82883"	"226.9"	"100.000"	"31.7563"	"7961"	"7961"	"7935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"350.2"	""	"234.3"	""	"256.5"	""	"362.2"	""	"489.7"	"462.7"	""	"530"	"22"	"34.000"	"27.000"	"0.16377434603668"	"15"	"0.002189"	"0.02052"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDAYELK"	"[R].LYDAYELk.[H]"	"K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"622.34216"	"1243.67705"	"1243.67717"	"-0.10"	"-0.00006"	"6/62"	"6"	"62"	"708405.636291504"	"HCD"	"MS2"	"4.887997"	"42.0"	"100.000"	"69.4551"	"23251"	"23251"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"56.9"	""	"62.3"	""	"64.5"	"3.0"	"82.6"	"73.3"	""	"572"	"41"	"34.000"	"27.000"	"0.00236791458821727"	"17"	"0.001615"	"0.01372"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYTTSK"	"[K].eGYTTSk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"622.34930"	"1243.69133"	"1243.69344"	"-1.69"	"-0.00105"	"5/58"	"5"	"58"	"1535233.35632324"	"HCD"	"MS2"	"28.94619"	"143.6"	"100.000"	"31.5019"	"7858"	"7858"	"7833"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.1"	""	"189.8"	""	"189.3"	""	"233.1"	""	"262.4"	"263.2"	""	"552"	"26"	"34.000"	"27.000"	"0.0777873689028989"	"17"	"0.002189"	"0.02057"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.35071"	"1243.69414"	"1243.69561"	"-1.19"	"-0.00074"	"5/80"	"5"	"80"	"3515326.83959961"	"HCD"	"MS2"	"0"	"176.0"	"100.000"	"37.0283"	"10055"	"10055"	"10036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"339.8"	""	"248.5"	""	"205.5"	""	"276.8"	""	"293.4"	"302.6"	""	"519"	"29"	"34.000"	"27.000"	"0.0336618020820336"	"14"	"0.001488"	"0.01267"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"622.35077"	"1243.69426"	"1243.69561"	"-1.09"	"-0.00068"	"5/80"	"5"	"80"	"1108331.37158203"	"HCD"	"MS2"	"0"	"65.2"	"100.000"	"36.4310"	"9814"	"9814"	"9799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.8"	""	"92.3"	""	"79.7"	""	"112.5"	"0.8"	"99.9"	"101.9"	""	"523"	"31"	"34.000"	"27.000"	"0.0202055973002526"	"17"	"0.002559"	"0.02552"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"622.35095"	"1243.69463"	"1243.69561"	"-0.79"	"-0.00049"	"6/80"	"6"	"80"	"4139339.70135498"	"HCD"	"MS2"	"2.920112"	"200.4"	"100.000"	"36.9162"	"10047"	"10047"	"10026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"382.6"	""	"276.3"	""	"215.6"	""	"338.7"	""	"345.0"	"341.0"	""	"523"	"39"	"34.000"	"27.000"	"0.00299551634188008"	"17"	"0.0007633"	"0.007512"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"622.35120"	"1243.69512"	"1243.69561"	"-0.40"	"-0.00025"	"6/80"	"6"	"80"	"11490350.7081299"	"HCD"	"MS2"	"0"	"486.2"	"100.000"	"36.6104"	"9922"	"9922"	"9913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1084.2"	""	"726.2"	""	"510.0"	""	"825.2"	""	"687.1"	"756.6"	""	"525"	"40"	"34.000"	"27.000"	"0.0028322351458533"	"17"	"9.9E-05"	"0.0008622"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPNNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"622.35150"	"1243.69573"	"1243.69561"	"0.09"	"0.00006"	"6/80"	"6"	"80"	"12634884.1872559"	"HCD"	"MS2"	"0.4110824"	"512.4"	"100.000"	"36.7295"	"9934"	"9934"	"9918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1092.7"	""	"747.5"	""	"523.8"	""	"889.1"	""	"761.7"	"825.4"	""	"516"	"40"	"34.000"	"27.000"	"0.00268299402783897"	"23"	"9.9E-05"	"0.0004578"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGQIVMPR"	"[K].tPGQIVmPR.[G]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.35431"	"1243.70134"	"1243.70301"	"-1.34"	"-0.00083"	"8/74"	"8"	"74"	"3061147.42370605"	"HCD"	"MS2"	"0"	"92.9"	"100.000"	"39.7021"	"11175"	"11175"	"11162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.3"	""	"105.2"	""	"139.2"	""	"213.9"	"0.4"	"160.9"	"160.4"	""	"599"	"25"	"34.000"	"27.000"	"0.100091414487821"	"14"	"0.004959"	"0.06269"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGQIVMPR"	"[K].tPGQIVmPR.[G]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.35492"	"1243.70256"	"1243.70301"	"-0.36"	"-0.00022"	"8/74"	"8"	"74"	"2112384.01776123"	"HCD"	"MS2"	"14.82651"	"69.3"	"100.000"	"39.6465"	"11119"	"11119"	"11101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.2"	""	"84.4"	""	"91.7"	""	"165.1"	""	"122.1"	"113.9"	""	"593"	"21"	"34.000"	"27.000"	"0.254111721110805"	"14"	"0.001872"	"0.01545"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIDEQLR"	"[R].lQIDEQLR.[Q]"	"N-Term(TMT6plex)"	"2"	"2"	"Q80WE1; Q5XI81"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2;Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"Q80WE1; Q5XI81"	"Synaptic functional regulator FMR1 OS=Rattus norvegicus OX=10116 GN=Fmr1 PE=1 SV=2; Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"622.36310"	"1243.71892"	"1243.72077"	"-1.49"	"-0.00092"	"5/70"	"5"	"70"	"1316624.00970459"	"HCD"	"MS2"	"49.76725"	"79.7"	"100.000"	"70.1609"	"23504"	"23504"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.0"	""	"99.4"	""	"101.2"	""	"127.1"	"0.2"	"153.4"	"136.4"	""	"561"	"16"	"34.000"	"27.000"	"0.786924135445456"	"21"	"0.000264"	"0.006044"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFSCLTR"	"[K].eNFScLTR.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.80139"	"1244.59551"	"1244.59649"	"-0.79"	"-0.00049"	"6/80"	"6"	"80"	"1396517.82788086"	"HCD"	"MS2"	"21.18562"	"80.8"	"100.000"	"78.4161"	"26876"	"26876"	"26855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.5"	""	"103.0"	""	"108.9"	""	"133.0"	""	"135.5"	"164.7"	""	"291"	"14"	"31.000"	"24.000"	"0.632212376169637"	"13"	"0.0001991"	"0.003457"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFSCLTR"	"[K].eNFScLTR.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.80145"	"1244.59563"	"1244.59649"	"-0.70"	"-0.00043"	"6/80"	"6"	"80"	"1300025.80224609"	"HCD"	"MS2"	"27.98148"	"79.0"	"100.000"	"78.2779"	"26793"	"26793"	"26774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.8"	""	"96.2"	""	"104.8"	""	"120.5"	""	"147.8"	"164.2"	""	"294"	"12"	"31.000"	"24.000"	"0.984730375842294"	"13"	"0.0005778"	"0.007076"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFSCLTR"	"[K].eNFScLTR.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.80157"	"1244.59587"	"1244.59649"	"-0.50"	"-0.00031"	"12/80"	"12"	"80"	"1084888.46356201"	"HCD"	"MS2"	"28.72811"	"64.1"	"100.000"	"78.7296"	"27004"	"27004"	"26983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.7"	""	"69.9"	""	"82.3"	""	"95.5"	"0.9"	"133.9"	"128.0"	""	"292"	"13"	"31.000"	"24.000"	"0.703643784532685"	"13"	"0.0005161"	"0.006744"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFSCLTR"	"[K].eNFScLTR.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.80176"	"1244.59624"	"1244.59649"	"-0.21"	"-0.00013"	"6/80"	"6"	"80"	"1344986.21398926"	"HCD"	"MS2"	"27.50469"	"76.2"	"100.000"	"78.5890"	"26920"	"26920"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.1"	""	"87.1"	""	"107.8"	""	"106.2"	""	"150.2"	"163.7"	""	"291"	"11"	"31.000"	"24.000"	"1.18812735032675"	"13"	"0.0001991"	"0.004396"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPnNR.[Q]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"622.84161"	"1244.67595"	"1244.67963"	"-2.96"	"-0.00184"	"5/80"	"5"	"80"	"1344712.53900146"	"HCD"	"MS2"	"24.65163"	"78.8"	"100.000"	"42.3433"	"12210"	"12210"	"12184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.1"	""	"85.1"	""	"85.5"	""	"134.0"	"0.5"	"151.6"	"179.7"	""	"584"	"33"	"34.000"	"27.000"	"0.0148041286816214"	"16"	"0.002525"	"0.02447"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVNTPNNR"	"[K].lSVNTPnNR.[Q]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"622.84314"	"1244.67900"	"1244.67963"	"-0.50"	"-0.00031"	"5/80"	"5"	"80"	"1461223.54785156"	"HCD"	"MS2"	"43.92008"	"81.5"	"100.000"	"42.1614"	"12170"	"12170"	"12145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.7"	""	"87.4"	""	"89.5"	""	"145.1"	""	"139.7"	"176.9"	""	"583"	"33"	"34.000"	"27.000"	"0.0132019644541906"	"15"	"0.001348"	"0.01142"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84412"	"1244.68096"	"1244.68365"	"-2.17"	"-0.00135"	"7/72"	"7"	"72"	"4536121.68121338"	"HCD"	"MS2"	"5.962267"	"166.1"	"100.000"	"46.2382"	"13797"	"13797"	"13777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.0"	""	"220.8"	""	"237.2"	""	"232.1"	""	"310.2"	"328.2"	""	"644"	"25"	"35.000"	"28.000"	"0.101357495714062"	"14"	"0.001316"	"0.01049"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVWEVPER"	"[K].tVWEVPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84430"	"1244.68132"	"1244.68365"	"-1.87"	"-0.00117"	"6/68"	"6"	"68"	"1139619.96179199"	"HCD"	"MS2"	"3.274981"	"62.4"	"100.000"	"69.3223"	"23163"	"23163"	"23139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.7"	""	"95.7"	""	"79.9"	""	"92.4"	""	"111.8"	"126.9"	""	"648"	"7"	"35.000"	"28.000"	"6.34665674215941"	"13"	"0.005871"	"0.07251"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLSEPWR"	"[K].eVLSEPWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.2069"	"0.0000"	"1"	"1"	"1"	"622.84442"	"1244.68157"	"1244.68365"	"-1.68"	"-0.00104"	"5/64"	"5"	"64"	"679012.597045898"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"76.8586"	"26223"	"26223"	"26200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.1"	""	"55.5"	""	"54.0"	""	"71.3"	"2.1"	"83.7"	"77.4"	""	"648"	"29"	"35.000"	"28.000"	"0.0399525965966167"	""	"0.002166"	"0.01981"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84467"	"1244.68205"	"1244.68365"	"-1.28"	"-0.00080"	"7/72"	"7"	"72"	"4519304.21002197"	"HCD"	"MS2"	"0"	"168.6"	"100.000"	"45.9310"	"13706"	"13706"	"13685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"245.3"	""	"223.7"	""	"235.2"	""	"246.3"	"2.2"	"314.3"	"331.5"	""	"646"	"30"	"35.000"	"28.000"	"0.0309886403979646"	"14"	"0.00394"	"0.04334"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84485"	"1244.68242"	"1244.68365"	"-0.99"	"-0.00062"	"12/72"	"12"	"72"	"2849770.08984375"	"HCD"	"MS2"	"15.2962"	"118.0"	"100.000"	"45.9415"	"13676"	"13676"	"13653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.7"	""	"158.9"	""	"178.6"	""	"170.2"	"0.6"	"200.8"	"239.2"	""	"649"	"28"	"35.000"	"28.000"	"0.0478866770048028"	"14"	"0.002525"	"0.02461"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLSEPWR"	"[K].eVLSEPWR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.3226"	"0.0000"	"1"	"1"	"1"	"622.84491"	"1244.68254"	"1244.68365"	"-0.89"	"-0.00056"	"5/64"	"5"	"64"	"716474.782104492"	"HCD"	"MS2"	"28.02487"	"47.1"	"100.000"	"77.1633"	"26343"	"26343"	"26326"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.4"	""	"74.1"	""	"58.9"	""	"81.8"	"3.8"	"83.5"	"87.1"	""	"649"	"31"	"35.000"	"28.000"	"0.027115317941604"	""	"0.001217"	"0.009364"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84540"	"1244.68352"	"1244.68365"	"-0.11"	"-0.00007"	"8/72"	"8"	"72"	"1513855.9586792"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"46.2519"	"13835"	"13835"	"13820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.9"	""	"86.6"	""	"97.6"	""	"135.5"	"4.4"	"150.2"	"155.3"	""	"633"	"11"	"35.000"	"28.000"	"2.75025975869115"	"13"	"0.008893"	"0.1151"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84576"	"1244.68425"	"1244.68365"	"0.48"	"0.00030"	"10/72"	"10"	"72"	"3481507.33630371"	"HCD"	"MS2"	"13.65429"	"151.5"	"100.000"	"45.6230"	"13580"	"13580"	"13560"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.5"	""	"200.9"	""	"214.5"	""	"243.2"	"1.8"	"238.7"	"297.3"	""	"612"	"24"	"34.000"	"27.000"	"0.10932548847449"	"14"	"0.002628"	"0.02728"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84607"	"1244.68486"	"1244.68365"	"0.97"	"0.00060"	"7/72"	"7"	"72"	"1552751.09539795"	"HCD"	"MS2"	"0"	"75.8"	"100.000"	"46.2311"	"13827"	"13827"	"13811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.4"	""	"83.8"	""	"92.6"	""	"134.5"	"1.5"	"152.6"	"151.8"	""	"628"	"14"	"34.000"	"27.000"	"1.17470724717425"	"13"	"0.001951"	"0.01666"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPEAPPSVR"	"[K].yPEAPPSVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.84607"	"1244.68486"	"1244.68365"	"0.97"	"0.00060"	"7/72"	"7"	"72"	"1882203.16595459"	"HCD"	"MS2"	"0"	"86.6"	"100.000"	"46.5213"	"13908"	"13908"	"13900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.9"	""	"91.5"	""	"114.7"	""	"142.8"	"2.0"	"167.9"	"186.8"	""	"628"	"19"	"34.000"	"27.000"	"0.38541591858374"	"14"	"0.002875"	"0.03123"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHAEGLGYR"	"[R].iHAEGLGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3MIF4"	"Xylulose kinase OS=Rattus norvegicus OX=10116 GN=Xylb PE=2 SV=1"	"Q3MIF4"	"Xylulose kinase OS=Rattus norvegicus OX=10116 GN=Xylb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"415.56992"	"1244.69519"	"1244.69489"	"0.25"	"0.00010"	"7/64"	"7"	"64"	"3862608.71453857"	"HCD"	"MS2"	"21.42058"	"107.1"	"100.000"	"38.8683"	"10805"	"10805"	"10781"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.2"	""	"146.2"	""	"150.1"	""	"159.9"	"1.3"	"218.4"	"198.5"	""	"708"	"28"	"35.000"	"28.000"	"0.0566243542129593"	"14"	"9.9E-05"	"0.0006638"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.85577"	"1244.70427"	"1244.70478"	"-0.41"	"-0.00026"	"8/92"	"8"	"92"	"2199875.57849121"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"73.5040"	"24860"	"24860"	"24842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.5"	""	"46.5"	""	"48.8"	""	"110.2"	""	"68.4"	"61.0"	""	"720"	"58"	"35.000"	"28.000"	"5.39886540780854E-05"	"17"	"0"	"0.0001895"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVNSATGVPTV"	"[K].aVNSATGVPTV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.85596"	"1244.70464"	"1244.70478"	"-0.12"	"-0.00007"	"8/92"	"8"	"92"	"2239998.50628662"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"73.6064"	"24931"	"24931"	"24913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"50.5"	""	"50.4"	""	"116.1"	"0.6"	"74.8"	"70.3"	""	"693"	"56"	"35.000"	"28.000"	"8.10407103195466E-05"	"16"	"0"	"4.112E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"415.57623"	"1244.71415"	"1244.71602"	"-1.50"	"-0.00062"	"13/82"	"13"	"82"	"5444868.20275879"	"HCD"	"MS2"	"5.749528"	"70.1"	"100.000"	"48.6952"	"14824"	"14824"	"14811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.4"	""	"99.7"	""	"87.1"	""	"120.8"	"2.6"	"129.3"	"133.3"	""	"715"	"56"	"35.000"	"28.000"	"9.00069501673789E-05"	"28"	"0"	"3.982E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"622.86072"	"1244.71416"	"1244.71602"	"-1.49"	"-0.00093"	"6/74"	"6"	"74"	"2269707.61047363"	"HCD"	"MS2"	"0"	"107.6"	"100.000"	"57.2537"	"18297"	"18297"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.7"	""	"133.7"	""	"120.0"	""	"143.9"	""	"204.2"	"271.2"	""	"715"	"41"	"35.000"	"28.000"	"0.00307805266405995"	"24"	"9.9E-05"	"0.0004281"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"622.86072"	"1244.71416"	"1244.71602"	"-1.49"	"-0.00093"	"6/74"	"6"	"74"	"3872736.31982422"	"HCD"	"MS2"	"4.18308"	"167.1"	"100.000"	"56.9387"	"18169"	"18169"	"18153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"248.8"	""	"214.7"	""	"190.4"	""	"223.0"	""	"310.9"	"402.8"	""	"715"	"41"	"35.000"	"28.000"	"0.00283319225646769"	"21"	"0"	"0.0003443"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"415.57629"	"1244.71433"	"1244.71602"	"-1.36"	"-0.00056"	"11/82"	"11"	"82"	"1199430.40655518"	"HCD"	"MS2"	"9.992211"	"30.2"	"100.000"	"49.2895"	"15030"	"15030"	"15010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"38.3"	""	"48.8"	""	"50.9"	"1.5"	"57.5"	"56.6"	""	"715"	"38"	"35.000"	"28.000"	"0.00525141144257682"	"25"	"0.0001686"	"0.001414"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"415.57629"	"1244.71433"	"1244.71602"	"-1.36"	"-0.00056"	"11/82"	"11"	"82"	"2363352.96081543"	"HCD"	"MS2"	"42.2564"	"45.7"	"100.000"	"48.7268"	"14802"	"14802"	"14771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	""	"56.8"	""	"62.9"	""	"80.9"	""	"87.3"	"91.0"	""	"715"	"52"	"35.000"	"28.000"	"0.000209062455081652"	""	"0"	"0.0003969"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"622.86084"	"1244.71440"	"1244.71602"	"-1.30"	"-0.00081"	"6/74"	"6"	"74"	"2216688.61108398"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"57.5325"	"18376"	"18376"	"18362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.0"	""	"128.7"	""	"122.0"	""	"160.6"	""	"189.9"	"254.3"	""	"715"	"41"	"35.000"	"28.000"	"0.00307805266405995"	"22"	"0"	"0.0001347"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"622.86084"	"1244.71440"	"1244.71602"	"-1.30"	"-0.00081"	"6/74"	"6"	"74"	"3818386.79119873"	"HCD"	"MS2"	"7.50088"	"169.0"	"100.000"	"57.2245"	"18251"	"18251"	"18238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.4"	""	"205.7"	""	"195.0"	""	"227.3"	""	"318.3"	"410.8"	""	"715"	"41"	"35.000"	"28.000"	"0.00287922792728666"	"22"	"0"	"0.000184"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7679"	"0.0000"	"1"	"1"	"1"	"415.57632"	"1244.71442"	"1244.71602"	"-1.28"	"-0.00053"	"13/82"	"13"	"82"	"5431796.94781494"	"HCD"	"MS2"	"1.13757"	"65.3"	"100.000"	"48.9956"	"14911"	"14911"	"14903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.1"	""	"75.9"	""	"84.8"	""	"108.0"	"1.3"	"129.5"	"137.5"	""	"715"	"56"	"35.000"	"28.000"	"8.95934057958981E-05"	""	"0"	"4.57E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"622.86090"	"1244.71453"	"1244.71602"	"-1.20"	"-0.00075"	"6/74"	"6"	"74"	"1184240.70117188"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"56.6498"	"18052"	"18052"	"18037"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.4"	""	"80.5"	""	"79.9"	""	"99.7"	""	"116.0"	"139.4"	""	"715"	"43"	"35.000"	"28.000"	"0.0016079629812435"	"24"	"0"	"0.0001159"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"622.86096"	"1244.71465"	"1244.71602"	"-1.10"	"-0.00068"	"7/74"	"7"	"74"	"758916.696716309"	"HCD"	"MS2"	"16.7181"	"50.3"	"100.000"	"57.8658"	"18512"	"18512"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.6"	""	"64.0"	""	"56.0"	""	"81.1"	""	"93.6"	"113.9"	""	"719"	"32"	"35.000"	"28.000"	"0.0219633657953553"	"22"	"9.9E-05"	"0.0005357"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.5610"	"0.0000"	"1"	"1"	"1"	"415.57642"	"1244.71469"	"1244.71602"	"-1.06"	"-0.00044"	"11/82"	"11"	"82"	"912437.960876465"	"HCD"	"MS2"	"3.87845"	"26.9"	"100.000"	"49.0072"	"14950"	"14950"	"14928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"37.9"	""	"45.9"	""	"40.5"	"0.3"	"50.6"	"48.2"	""	"719"	"41"	"35.000"	"28.000"	"0.00287540414675027"	""	"9.9E-05"	"0.0008397"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVAAQEAAR"	"[R].lSVAAQEAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"622.86115"	"1244.71501"	"1244.71602"	"-0.81"	"-0.00050"	"8/90"	"8"	"90"	"3029301.79644775"	"HCD"	"MS2"	"4.681033"	"146.2"	"100.000"	"44.0810"	"12918"	"12918"	"12897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.7"	""	"185.9"	""	"224.7"	""	"207.1"	"0.9"	"266.7"	"291.0"	""	"719"	"55"	"35.000"	"28.000"	"0.000105123277983468"	"21"	"0"	"1.35E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"622.86115"	"1244.71501"	"1244.71602"	"-0.81"	"-0.00050"	"8/82"	"8"	"82"	"31324099.0236816"	"HCD"	"MS2"	"0"	"423.7"	"34.148"	"48.9427"	"14889"	"14889"	"14879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"598.7"	""	"528.8"	""	"549.7"	""	"721.5"	""	"774.6"	"844.9"	""	"719"	"62"	"35.000"	"28.000"	"2.49861242173172E-05"	""	"0"	"1.45E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"622.86121"	"1244.71514"	"1244.71602"	"-0.71"	"-0.00044"	"6/74"	"6"	"74"	"1139135.79681396"	"HCD"	"MS2"	"0"	"64.3"	"100.000"	"56.9375"	"18134"	"18134"	"18110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.6"	""	"80.6"	""	"78.8"	""	"90.9"	""	"124.7"	"147.2"	""	"719"	"43"	"35.000"	"28.000"	"0.00166225977193034"	"22"	"0"	"0.0001524"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7458"	"0.0000"	"1"	"1"	"1"	"622.86145"	"1244.71562"	"1244.71602"	"-0.32"	"-0.00020"	"8/82"	"8"	"82"	"4791700.92687988"	"HCD"	"MS2"	"4.800396"	"208.3"	"100.000"	"48.6647"	"14776"	"14776"	"14756"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.5"	""	"257.0"	""	"257.0"	""	"376.8"	""	"385.2"	"411.3"	""	"722"	"59"	"35.000"	"28.000"	"4.76987723941353E-05"	""	"0"	"3.338E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTGVQNLR"	"[R].dLTGVQNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"622.86151"	"1244.71575"	"1244.71602"	"-0.22"	"-0.00014"	"6/74"	"6"	"74"	"820753.781433105"	"HCD"	"MS2"	"10.34841"	"54.3"	"100.000"	"57.5642"	"18424"	"18424"	"18403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"69.5"	""	"69.8"	""	"84.1"	"1.1"	"105.8"	"117.9"	""	"685"	"42"	"35.000"	"28.000"	"0.00225247809294231"	"20"	"0.0001686"	"0.001131"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVAAQEAAR"	"[R].lSVAAQEAAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"622.86151"	"1244.71575"	"1244.71602"	"-0.22"	"-0.00014"	"8/90"	"8"	"90"	"3138068.04504395"	"HCD"	"MS2"	"4.296934"	"146.4"	"100.000"	"43.9001"	"12880"	"12880"	"12858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.6"	""	"199.1"	""	"230.8"	""	"191.2"	"0.3"	"260.3"	"290.6"	""	"685"	"55"	"35.000"	"28.000"	"0.000103195456328375"	"19"	"0"	"5.098E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"622.86151"	"1244.71575"	"1244.71602"	"-0.22"	"-0.00014"	"8/82"	"8"	"82"	"3579542.90466309"	"HCD"	"MS2"	"0"	"168.2"	"100.000"	"48.3324"	"14677"	"14677"	"14657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"255.9"	""	"209.9"	""	"208.3"	""	"290.6"	""	"302.2"	"327.6"	""	"685"	"61"	"35.000"	"28.000"	"2.4983919726219E-05"	""	"0"	"4.721E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"622.86151"	"1244.71575"	"1244.71602"	"-0.22"	"-0.00014"	"8/82"	"8"	"82"	"33916553.4846191"	"HCD"	"MS2"	"0"	"377.5"	"28.808"	"48.5991"	"14786"	"14786"	"14776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"529.6"	""	"476.0"	""	"490.2"	""	"652.9"	""	"673.5"	"761.6"	""	"685"	"62"	"35.000"	"28.000"	"2.33163505352606E-05"	""	"0"	"1.52E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"622.86163"	"1244.71599"	"1244.71602"	"-0.02"	"-0.00001"	"8/82"	"8"	"82"	"1430113.90374756"	"HCD"	"MS2"	"24.88104"	"79.4"	"100.000"	"49.1612"	"15012"	"15012"	"14999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.4"	""	"95.7"	""	"108.4"	""	"126.9"	""	"148.7"	"176.4"	""	"674"	"36"	"35.000"	"28.000"	"0.00782762300372345"	"22"	"0"	"5.084E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"622.86169"	"1244.71611"	"1244.71602"	"0.08"	"0.00005"	"6/82"	"6"	"82"	"666466.691894531"	"HCD"	"MS2"	"39.19296"	"43.8"	"100.000"	"49.6385"	"15172"	"15172"	"15148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"53.5"	""	"53.2"	""	"70.1"	"0.8"	"76.1"	"91.2"	""	"674"	"35"	"35.000"	"28.000"	"0.0104383030383599"	"23"	"0"	"7.954E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"622.86182"	"1244.71636"	"1244.71602"	"0.27"	"0.00017"	"8/82"	"8"	"82"	"10167446.7603149"	"HCD"	"MS2"	"0"	"344.8"	"82.043"	"48.8901"	"14902"	"14902"	"14890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"487.5"	""	"405.5"	""	"473.0"	""	"550.5"	""	"645.2"	"709.3"	""	"815"	"64"	"36.000"	"29.000"	"1.57807490305559E-05"	""	"0"	"3.872E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"415.57706"	"1244.71662"	"1244.71602"	"0.48"	"0.00020"	"11/82"	"11"	"82"	"2356515.82666016"	"HCD"	"MS2"	"32.47542"	"44.5"	"100.000"	"48.4196"	"14713"	"14713"	"14686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.8"	""	"51.7"	""	"55.1"	""	"70.6"	""	"95.8"	"90.6"	""	"815"	"50"	"36.000"	"29.000"	"0.000401908890394718"	"29"	"0"	"0.0001449"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAAEVIAQAR"	"[K].sAAEVIAQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"622.86212"	"1244.71697"	"1244.71602"	"0.76"	"0.00048"	"8/82"	"8"	"82"	"7430078.67779541"	"HCD"	"MS2"	"0"	"307.3"	"100.000"	"49.2456"	"15012"	"15012"	"14998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"432.1"	""	"382.0"	""	"422.2"	""	"494.4"	""	"574.3"	"610.5"	""	"812"	"61"	"36.000"	"29.000"	"2.96159749163355E-05"	""	"0"	"4.229E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTEPVK"	"[R].nVTEPVk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5PPK9"	"EARP and GARP complex-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Eipr1 PE=1 SV=1"	"Q5PPK9"	"EARP and GARP complex-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Eipr1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"622.88403"	"1244.76079"	"1244.76146"	"-0.54"	"-0.00033"	"6/62"	"6"	"62"	"990299.168823242"	"HCD"	"MS2"	"0"	"81.5"	"100.000"	"40.4696"	"11487"	"11487"	"11464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.3"	""	"96.8"	""	"104.4"	""	"131.7"	"0.1"	"154.5"	"158.0"	""	"649"	"20"	"35.000"	"28.000"	"0.315656474115625"	"18"	"0.002328"	"0.02209"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"623.31024"	"1245.61321"	"1245.61353"	"-0.26"	"-0.00016"	"7/64"	"7"	"64"	"2124090.79650879"	"HCD"	"MS2"	"2.013925"	"88.8"	"100.000"	"76.2750"	"26016"	"26016"	"25998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.3"	""	"88.6"	""	"103.9"	""	"240.9"	"0.8"	"160.3"	"160.7"	""	"407"	"28"	"33.000"	"26.000"	"0.0300306279521644"	"20"	"0.006958"	"0.08802"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"623.31036"	"1245.61345"	"1245.61353"	"-0.06"	"-0.00004"	"7/64"	"7"	"64"	"2743017.19067383"	"HCD"	"MS2"	"3.309753"	"107.8"	"100.000"	"76.1567"	"25937"	"25937"	"25923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.0"	""	"114.8"	""	"125.2"	""	"314.1"	"0.7"	"188.2"	"176.9"	""	"405"	"28"	"33.000"	"26.000"	"0.0288021579392371"	"20"	"0.001103"	"0.009106"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"623.31042"	"1245.61357"	"1245.61353"	"0.04"	"0.00002"	"7/64"	"7"	"64"	"3739250.55255127"	"HCD"	"MS2"	"5.652636"	"144.0"	"100.000"	"75.9823"	"25898"	"25898"	"25881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.0"	""	"149.5"	""	"158.7"	""	"409.4"	"0.7"	"259.3"	"259.6"	""	"407"	"30"	"33.000"	"26.000"	"0.0215558133073578"	"20"	"0.001049"	"0.008893"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGFFDR"	"[K].mVEGFFDR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"623.31042"	"1245.61357"	"1245.61353"	"0.04"	"0.00002"	"7/64"	"7"	"64"	"3373530.96551514"	"HCD"	"MS2"	"6.921211"	"144.7"	"100.000"	"75.8638"	"25818"	"25818"	"25801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.3"	""	"164.6"	""	"174.1"	""	"398.9"	""	"253.9"	"256.3"	""	"407"	"27"	"33.000"	"26.000"	"0.0402313321762763"	"20"	"0.002189"	"0.02077"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAEEWVR"	"[R].qVAEEWVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"Q66H59"	"N-acetylneuraminate lyase OS=Rattus norvegicus OX=10116 GN=Npl PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"623.34198"	"1245.67668"	"1245.67890"	"-1.78"	"-0.00111"	"6/72"	"6"	"72"	"291343.159362793"	"HCD"	"MS2"	"42.82862"	"28.8"	"100.000"	"58.1787"	"18640"	"18640"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.0"	""	"36.0"	""	"42.6"	""	"49.9"	""	"57.7"	"53.5"	""	"834"	"26"	"36.000"	"29.000"	"0.108927128478447"	"20"	"0.001615"	"0.0138"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLEWLAR"	"[R].dNLEWLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4324"	"0.0000"	"1"	"1"	"1"	"623.34308"	"1245.67888"	"1245.67890"	"-0.02"	"-0.00001"	"5/74"	"5"	"74"	"2220562.78240967"	"HCD"	"MS2"	"8.833463"	"99.9"	"100.000"	"92.5588"	"32591"	"32591"	"32575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.1"	""	"118.2"	""	"138.6"	""	"178.6"	"0.9"	"185.8"	"177.6"	""	"809"	"37"	"36.000"	"29.000"	"0.00748029156376632"	""	"0.0001686"	"0.001952"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"623.35272"	"1245.69817"	"1245.70003"	"-1.50"	"-0.00093"	"9/88"	"9"	"88"	"569697.340087891"	"HCD"	"MS2"	"0"	"54.7"	"100.000"	"55.3550"	"17533"	"17533"	"17506"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.5"	""	"68.9"	""	"73.4"	""	"89.7"	"1.8"	"103.4"	"102.1"	""	"865"	"29"	"36.000"	"29.000"	"0.0530867467476011"	""	"0"	"0.0002891"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPWDGK"	"[K].aNPWDGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"623.35339"	"1245.69951"	"1245.69919"	"0.26"	"0.00016"	"6/58"	"6"	"58"	"1953046.1796875"	"HCD"	"MS2"	"0"	"154.0"	"100.000"	"54.4751"	"17174"	"17174"	"17157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"251.9"	""	"210.4"	""	"235.5"	""	"224.6"	"6.9"	"255.9"	"271.8"	""	"861"	"31"	"36.000"	"29.000"	"0.0313309205853103"	"18"	"0.001951"	"0.01646"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2456"	"0.0000"	"1"	"1"	"1"	"623.35339"	"1245.69951"	"1245.70003"	"-0.42"	"-0.00026"	"8/88"	"8"	"88"	"3653039.44647217"	"HCD"	"MS2"	"4.794479"	"172.5"	"100.000"	"54.9504"	"17367"	"17367"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"282.7"	""	"225.5"	""	"266.7"	""	"260.0"	"13.3"	"287.3"	"295.9"	""	"861"	"57"	"36.000"	"29.000"	"9.35347857500843E-05"	""	"0"	"1.729E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGIVLGADTR"	"[K].dGIVLGADTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2456"	"0.0000"	"1"	"1"	"1"	"623.35339"	"1245.69951"	"1245.70003"	"-0.42"	"-0.00026"	"8/88"	"8"	"88"	"3516587.84844971"	"HCD"	"MS2"	"5.234572"	"175.7"	"100.000"	"55.3183"	"17483"	"17483"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.3"	""	"257.4"	""	"261.3"	""	"252.5"	"8.8"	"290.6"	"326.4"	""	"861"	"57"	"36.000"	"29.000"	"8.12780275785955E-05"	""	"0"	"1.657E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANPWDGK"	"[K].aNPWDGk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"623.35388"	"1245.70049"	"1245.69919"	"1.04"	"0.00065"	"6/58"	"6"	"58"	"1357485.27856445"	"HCD"	"MS2"	"5.416008"	"105.8"	"100.000"	"54.9326"	"17326"	"17326"	"17303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.5"	""	"144.6"	""	"162.3"	""	"149.8"	"4.3"	"184.0"	"208.1"	""	"876"	"27"	"36.000"	"29.000"	"0.0823140765759832"	"25"	"0.001615"	"0.01377"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPEFQALR"	"[K].rPEFQALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"415.91327"	"1245.72525"	"1245.72652"	"-1.02"	"-0.00042"	"7/70"	"7"	"70"	"3668159.27484131"	"HCD"	"MS2"	"39.49448"	"159.7"	"100.000"	"38.2845"	"10602"	"10602"	"10581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.7"	""	"199.0"	""	"213.5"	""	"267.0"	""	"315.2"	"325.3"	""	"811"	"22"	"36.000"	"29.000"	"0.24043121911719"	"23"	"0.001348"	"0.01137"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPEEAK"	"[R].iTPEEAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"623.37610"	"1245.74492"	"1245.74547"	"-0.44"	"-0.00028"	"6/54"	"6"	"54"	"7731784.12976074"	"HCD"	"MS2"	"6.807223"	"495.4"	"100.000"	"43.6400"	"12739"	"12739"	"12716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"696.7"	""	"688.5"	""	"757.2"	""	"801.3"	""	"925.6"	"824.5"	""	"746"	"23"	"35.000"	"28.000"	"0.184802921170187"	""	"0.00455"	"0.05368"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPEEAK"	"[R].iTPEEAk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.2609"	"0.0000"	"1"	"1"	"1"	"623.37610"	"1245.74492"	"1245.74547"	"-0.44"	"-0.00028"	"6/54"	"6"	"54"	"7850526.35748291"	"HCD"	"MS2"	"7.460738"	"500.9"	"100.000"	"43.4700"	"12704"	"12704"	"12683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"688.2"	""	"721.5"	""	"758.7"	""	"816.3"	""	"927.3"	"835.8"	""	"746"	"23"	"35.000"	"28.000"	"0.188672598927161"	""	"0.004213"	"0.04659"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPATGGVK"	"[K].sAPATGGVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6LED0"	"Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"Q6LED0"	"Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.38184"	"1245.75640"	"1245.75671"	"-0.25"	"-0.00016"	"7/72"	"7"	"72"	"790330.321166992"	"HCD"	"MS2"	"45.99511"	"57.9"	"100.000"	"31.2935"	"7774"	"7774"	"7744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.8"	""	"54.5"	""	"53.7"	""	"104.9"	""	"154.3"	"138.0"	""	"658"	"27"	"35.000"	"28.000"	"0.0609811904103473"	"14"	"0.0001991"	"0.003962"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAELVK"	"[R].lDAELVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"623.39404"	"1245.78081"	"1245.78186"	"-0.84"	"-0.00053"	"5/52"	"5"	"52"	"1032578.25152588"	"HCD"	"MS2"	"54.79142"	"74.0"	"100.000"	"83.8846"	"29064"	"29064"	"29049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.5"	""	"108.8"	""	"106.7"	""	"129.2"	"2.0"	"137.0"	"127.4"	""	"512"	"21"	"34.000"	"27.000"	"0.220922508228344"	"22"	"0.002799"	"0.02944"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVDILK"	"[R].eAVDILk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"623.39410"	"1245.78093"	"1245.78186"	"-0.75"	"-0.00046"	"6/54"	"6"	"54"	"2121840.4508667"	"HCD"	"MS2"	"9.410348"	"146.0"	"100.000"	"79.6545"	"27354"	"27354"	"27339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.9"	""	"123.0"	""	"123.6"	""	"165.5"	""	"214.2"	"596.0"	""	"512"	"31"	"34.000"	"27.000"	"0.0182070659495252"	"26"	"0.001261"	"0.009646"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVDILK"	"[R].eAVDILk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"623.39435"	"1245.78142"	"1245.78186"	"-0.35"	"-0.00022"	"6/54"	"6"	"54"	"2655635.71209717"	"HCD"	"MS2"	"18.05534"	"184.3"	"100.000"	"79.4695"	"27306"	"27306"	"27289"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.7"	""	"151.7"	""	"162.9"	""	"202.7"	"0.9"	"242.6"	"734.2"	""	"506"	"32"	"34.000"	"27.000"	"0.0155281787306693"	""	"0.001488"	"0.01275"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVDILK"	"[R].eAVDILk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"623.39441"	"1245.78154"	"1245.78186"	"-0.26"	"-0.00016"	"10/54"	"10"	"54"	"2199165.80847168"	"HCD"	"MS2"	"11.95665"	"145.3"	"100.000"	"79.7784"	"27431"	"27431"	"27413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.4"	""	"128.3"	"2.0"	"139.6"	""	"165.0"	""	"227.5"	"549.6"	""	"504"	"24"	"34.000"	"27.000"	"0.0921298874865074"	"23"	"0.002189"	"0.0206"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELAVDK"	"[R].lELAVDk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P60570"	"Pannexin-1 OS=Rattus norvegicus OX=10116 GN=Panx1 PE=1 SV=1"	"P60570"	"Pannexin-1 OS=Rattus norvegicus OX=10116 GN=Panx1 PE=1 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"3"	"623.39447"	"1245.78166"	"1245.78186"	"-0.16"	"-0.00010"	"8/56"	"8"	"56"	"1037949.96472168"	"HCD"	"MS2"	"31.62562"	"75.0"	"100.000"	"77.1891"	"26384"	"26384"	"26370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"91.1"	""	"73.0"	""	"154.1"	""	"162.9"	"157.7"	""	"466"	"17"	"33.000"	"26.000"	"0.454313791743624"	""	"0.002834"	"0.03034"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVDILK"	"[R].eAVDILk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"623.39447"	"1245.78166"	"1245.78186"	"-0.16"	"-0.00010"	"6/54"	"6"	"54"	"2571340.65454102"	"HCD"	"MS2"	"12.82532"	"170.9"	"100.000"	"79.3591"	"27234"	"27234"	"27217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.7"	""	"140.0"	""	"170.0"	""	"203.8"	""	"217.3"	"672.4"	""	"466"	"31"	"33.000"	"26.000"	"0.0206231937090585"	"26"	"0.001615"	"0.01457"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELAVDK"	"[R].lELAVDk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P60570"	"Pannexin-1 OS=Rattus norvegicus OX=10116 GN=Panx1 PE=1 SV=1"	"P60570"	"Pannexin-1 OS=Rattus norvegicus OX=10116 GN=Panx1 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"623.39459"	"1245.78191"	"1245.78186"	"0.04"	"0.00002"	"6/56"	"6"	"56"	"954855.191467285"	"HCD"	"MS2"	"16.93075"	"74.0"	"100.000"	"77.2047"	"26359"	"26359"	"26345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.3"	""	"93.1"	""	"83.4"	""	"139.6"	""	"155.5"	"155.3"	""	"466"	"17"	"33.000"	"26.000"	"0.48012676979191"	"25"	"0.002084"	"0.01864"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAELVK"	"[R].lDAELVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"623.39459"	"1245.78191"	"1245.78186"	"0.04"	"0.00002"	"8/52"	"8"	"52"	"961377.573730469"	"HCD"	"MS2"	"57.58874"	"65.8"	"100.000"	"83.8725"	"29088"	"29088"	"29073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.7"	""	"93.7"	""	"86.4"	""	"115.7"	""	"124.4"	"117.7"	""	"466"	"12"	"33.000"	"26.000"	"1.45330216667404"	"23"	"0.003529"	"0.03881"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDAELVK"	"[R].lDAELVk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"Q4QQV8"	"Charged multivesicular body protein 5 OS=Rattus norvegicus OX=10116 GN=Chmp5 PE=2 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"623.39465"	"1245.78203"	"1245.78186"	"0.14"	"0.00009"	"10/52"	"10"	"52"	"1570856.543396"	"HCD"	"MS2"	"22.99591"	"108.1"	"100.000"	"84.1653"	"29206"	"29206"	"29196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.0"	""	"136.2"	""	"146.1"	""	"195.3"	"0.3"	"197.0"	"206.4"	""	"466"	"23"	"33.000"	"26.000"	"0.127161581634266"	"25"	"0.002525"	"0.02373"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEEVVK"	"[R].iAEEVVk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"623.39471"	"1245.78215"	"1245.78186"	"0.23"	"0.00015"	"6/50"	"6"	"50"	"632551.343688965"	"HCD"	"MS2"	"58.21036"	"51.0"	"100.000"	"62.7926"	"20514"	"20514"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.6"	""	"65.2"	""	"78.4"	""	"62.1"	"0.1"	"97.9"	"95.1"	""	"466"	"14"	"33.000"	"26.000"	"0.955775559958794"	"21"	"0.001316"	"0.01043"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVCDIPPR"	"[K].tAVcDIPPR.[G]"	"N-Term(TMT6plex); C4(Methylthio)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.82715"	"1246.64702"	"1246.64853"	"-1.21"	"-0.00075"	"8/72"	"8"	"72"	"295816.109130859"	"HCD"	"MS2"	"38.20507"	"23.4"	"100.000"	"74.6723"	"25334"	"25334"	"25314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"29.9"	""	"37.7"	""	"38.2"	""	"43.8"	"44.0"	""	"657"	"10"	"35.000"	"28.000"	"3.12273674716088"	"13"	"0.00455"	"0.05343"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVCDIPPR"	"[K].tAVcDIPPR.[G]"	"N-Term(TMT6plex); C4(Methylthio)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.82733"	"1246.64739"	"1246.64853"	"-0.92"	"-0.00057"	"11/72"	"11"	"72"	"377000.989868164"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"74.7217"	"25385"	"25385"	"25363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"42.4"	""	"40.8"	""	"38.8"	""	"47.6"	"50.1"	""	"657"	"16"	"35.000"	"28.000"	"0.788016613897903"	"14"	"0.0004582"	"0.006409"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNSVWNQR"	"[R].nNSVWNQR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"623.82758"	"1246.64787"	"1246.64900"	"-0.90"	"-0.00056"	"6/70"	"6"	"70"	"652548.20526123"	"HCD"	"MS2"	"0"	"47.6"	"100.000"	"33.2600"	"8531"	"8531"	"8508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"61.0"	""	"55.4"	""	"72.9"	""	"87.4"	"94.6"	""	"694"	"29"	"35.000"	"28.000"	"0.0426903263471896"	""	"0.0001991"	"0.002238"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNSVWNQR"	"[R].nNSVWNQR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"Q04631"	"Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Fnta PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"623.82831"	"1246.64934"	"1246.64900"	"0.27"	"0.00017"	"6/70"	"6"	"70"	"754692.739440918"	"HCD"	"MS2"	"0"	"57.7"	"100.000"	"33.1678"	"8531"	"8531"	"8506"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.7"	""	"70.0"	""	"68.8"	""	"91.7"	"0.6"	"100.9"	"108.8"	""	"709"	"41"	"35.000"	"28.000"	"0.00259786296997741"	"26"	"0.0001686"	"0.001253"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"416.23697"	"1246.69635"	"1246.69930"	"-2.37"	"-0.00098"	"6/78"	"6"	"78"	"1257334.42279053"	"HCD"	"MS2"	"37.07877"	"53.5"	"100.000"	"55.3848"	"17545"	"17545"	"17522"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.5"	""	"89.6"	""	"65.5"	""	"64.2"	""	"72.3"	"147.9"	""	"954"	"13"	"36.000"	"29.000"	"2.52068385096761"	"13"	"0.005266"	"0.06749"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"416.23743"	"1246.69773"	"1246.69930"	"-1.26"	"-0.00053"	"6/78"	"6"	"78"	"15280728.107666"	"HCD"	"MS2"	"3.042625"	"370.9"	"77.784"	"55.0932"	"17391"	"17391"	"17374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"499.9"	""	"782.7"	""	"368.2"	""	"299.5"	""	"375.0"	"1200.6"	""	"927"	"33"	"36.000"	"29.000"	"0.023607485873501"	"23"	"0.002588"	"0.0265"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"416.23758"	"1246.69818"	"1246.69930"	"-0.90"	"-0.00037"	"5/78"	"5"	"78"	"4318886.09082031"	"HCD"	"MS2"	"4.840613"	"147.0"	"100.000"	"55.3898"	"17513"	"17513"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.0"	""	"296.6"	""	"151.5"	""	"133.3"	""	"164.3"	"453.8"	""	"936"	"28"	"36.000"	"29.000"	"0.076251054327539"	"16"	"0.004073"	"0.04402"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"416.23758"	"1246.69818"	"1246.69930"	"-0.90"	"-0.00037"	"6/78"	"6"	"78"	"15621365.9318237"	"HCD"	"MS2"	"3.161342"	"307.1"	"63.319"	"54.7622"	"17291"	"17291"	"17275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.7"	""	"634.7"	""	"283.9"	""	"274.0"	""	"320.1"	"1003.6"	""	"936"	"38"	"36.000"	"29.000"	"0.00676465812709094"	"16"	"0.005632"	"0.07066"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"416.23776"	"1246.69873"	"1246.69930"	"-0.46"	"-0.00019"	"6/78"	"6"	"78"	"2991273.13000488"	"HCD"	"MS2"	"18.60138"	"115.8"	"100.000"	"54.4520"	"17164"	"17164"	"17141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.2"	""	"236.9"	""	"117.0"	""	"119.7"	"3.2"	"123.9"	"337.1"	""	"936"	"32"	"36.000"	"29.000"	"0.0309917323732425"	"14"	"0.007259"	"0.0924"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIHTLFGDK"	"[K].SIHTLFGDk.[L]"	"K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"416.23788"	"1246.69910"	"1246.69930"	"-0.16"	"-0.00007"	"4/78"	"4"	"78"	"2583643.48760986"	"HCD"	"MS2"	"26.22693"	"100.0"	"100.000"	"54.7923"	"17269"	"17269"	"17241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.3"	""	"203.7"	""	"96.8"	""	"100.2"	"0.2"	"118.2"	"289.4"	""	"917"	"17"	"36.000"	"29.000"	"0.896064640473019"	"16"	"0.003818"	"0.04181"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"623.85492"	"1246.70256"	"1246.70267"	"-0.09"	"-0.00006"	"7/70"	"7"	"70"	"1636347.30328369"	"HCD"	"MS2"	"28.74739"	"87.5"	"100.000"	"86.3699"	"30097"	"30097"	"30087"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.3"	""	"126.5"	""	"138.3"	""	"105.8"	""	"158.5"	"171.3"	""	"935"	"47"	"36.000"	"29.000"	"0.000878580611855528"	"24"	"0"	"3.059E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"623.85522"	"1246.70317"	"1246.70267"	"0.40"	"0.00025"	"7/70"	"7"	"70"	"1486133.34899902"	"HCD"	"MS2"	"13.26184"	"73.4"	"100.000"	"86.6562"	"30211"	"30211"	"30196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.0"	""	"89.9"	""	"108.1"	""	"92.1"	"0.5"	"143.7"	"152.9"	""	"936"	"45"	"36.000"	"29.000"	"0.00161899628822625"	"21"	"0"	"0.0003587"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"623.85529"	"1246.70329"	"1246.70267"	"0.50"	"0.00031"	"7/70"	"7"	"70"	"1446413.98016357"	"HCD"	"MS2"	"10.46061"	"70.3"	"100.000"	"86.6753"	"30185"	"30185"	"30170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"88.3"	""	"102.4"	""	"98.0"	""	"141.5"	"152.2"	""	"936"	"46"	"36.000"	"29.000"	"0.00107459756731659"	"22"	"0"	"0.0001919"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEGMDVVR"	"[K].vLEGMDVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"623.85583"	"1246.70439"	"1246.70267"	"1.38"	"0.00086"	"7/70"	"7"	"70"	"1531687.42108154"	"HCD"	"MS2"	"16.394"	"82.7"	"100.000"	"86.3728"	"30066"	"30066"	"30056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.8"	""	"108.9"	""	"121.4"	""	"117.1"	""	"148.1"	"169.1"	""	"914"	"49"	"36.000"	"29.000"	"0.000513944473102886"	"25"	"0"	"5.035E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEEALAK"	"[K].qEEALAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"3"	"623.87341"	"1246.73955"	"1246.74072"	"-0.94"	"-0.00059"	"12/62"	"12"	"62"	"1345167.65002441"	"HCD"	"MS2"	"13.09968"	"117.8"	"100.000"	"38.4155"	"10620"	"10620"	"10594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.5"	""	"136.8"	""	"144.2"	""	"187.3"	""	"231.2"	"257.0"	""	"742"	"25"	"35.000"	"28.000"	"0.124845792238307"	"23"	"0.002084"	"0.01873"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADELVK"	"[K].nADELVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"623.87341"	"1246.73955"	"1246.74072"	"-0.94"	"-0.00059"	"6/62"	"6"	"62"	"3943182.59338379"	"HCD"	"MS2"	"0"	"304.2"	"100.000"	"48.0507"	"14564"	"14564"	"14545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"441.2"	""	"367.6"	""	"348.1"	""	"553.3"	""	"600.6"	"578.3"	""	"742"	"35"	"35.000"	"28.000"	"0.0105044643044157"	""	"0.002328"	"0.02194"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEGIDK"	"[R].nIEGIDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"623.87341"	"1246.73955"	"1246.74072"	"-0.94"	"-0.00059"	"6/66"	"6"	"66"	"4015462.35852051"	"HCD"	"MS2"	"48.07848"	"260.0"	"100.000"	"55.1345"	"17408"	"17408"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"374.4"	""	"382.3"	""	"352.3"	""	"401.9"	""	"432.3"	"522.9"	""	"742"	"13"	"35.000"	"28.000"	"2.05292890519038"	"23"	"0.004672"	"0.05503"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEGIDK"	"[R].nIEGIDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"623.87347"	"1246.73967"	"1246.74072"	"-0.84"	"-0.00053"	"6/66"	"6"	"66"	"2680736.03790283"	"HCD"	"MS2"	"42.20646"	"218.6"	"100.000"	"55.4405"	"17533"	"17533"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"315.6"	""	"314.9"	""	"314.9"	""	"332.1"	""	"388.1"	"404.7"	""	"742"	"20"	"35.000"	"28.000"	"0.391177538561157"	"23"	"0.002875"	"0.03105"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEEALAK"	"[K].qEEALAk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"3"	"623.87372"	"1246.74016"	"1246.74072"	"-0.45"	"-0.00028"	"6/62"	"6"	"62"	"1438779.89306641"	"HCD"	"MS2"	"9.746698"	"119.0"	"100.000"	"38.3351"	"10623"	"10623"	"10596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.1"	""	"136.4"	""	"141.0"	""	"191.0"	""	"234.7"	"255.8"	""	"742"	"30"	"35.000"	"28.000"	"0.0401211995931535"	"23"	"0.00212"	"0.01896"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEGIDK"	"[R].nIEGIDk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"623.87372"	"1246.74016"	"1246.74072"	"-0.45"	"-0.00028"	"6/66"	"6"	"66"	"3775093.21118164"	"HCD"	"MS2"	"49.53972"	"244.6"	"100.000"	"54.7715"	"17294"	"17294"	"17275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"359.5"	""	"367.6"	""	"346.9"	""	"347.0"	""	"421.2"	"480.0"	""	"742"	"21"	"35.000"	"28.000"	"0.324618980609379"	""	"0.003568"	"0.03951"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADELVK"	"[K].nADELVk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"623.87384"	"1246.74040"	"1246.74072"	"-0.26"	"-0.00016"	"6/62"	"6"	"62"	"3953491.25268555"	"HCD"	"MS2"	"0"	"313.8"	"100.000"	"48.3594"	"14652"	"14652"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"431.6"	""	"378.3"	""	"343.4"	""	"590.1"	""	"626.9"	"607.7"	""	"729"	"36"	"35.000"	"28.000"	"0.0102022869100673"	""	"0.002166"	"0.01972"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"623.87457"	"1246.74187"	"1246.74072"	"0.92"	"0.00057"	"12/60"	"12"	"60"	"4030522.71099854"	"HCD"	"MS2"	"0"	"300.8"	"100.000"	"37.6728"	"10352"	"10352"	"10340"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"335.6"	""	"344.7"	""	"363.5"	""	"509.1"	""	"624.9"	"684.2"	""	"717"	"39"	"35.000"	"28.000"	"0.00482490936929058"	"26"	"0.001316"	"0.01043"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEEALK"	"[K].aQEEALk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"623.87476"	"1246.74224"	"1246.74072"	"1.21"	"0.00076"	"12/60"	"12"	"60"	"4392949.20568848"	"HCD"	"MS2"	"0"	"321.8"	"100.000"	"37.7581"	"10351"	"10351"	"10340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"355.2"	""	"354.4"	""	"379.9"	""	"560.6"	""	"691.5"	"718.2"	""	"717"	"37"	"35.000"	"28.000"	"0.00738735823907296"	"25"	"0.002462"	"0.0231"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.33173"	"1247.65618"	"1247.65817"	"-1.60"	"-0.00100"	"14/84"	"14"	"84"	"5537409.44128418"	"HCD"	"MS2"	"48.41812"	"268.4"	"100.000"	"52.7492"	"16435"	"16435"	"16416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"447.0"	""	"264.2"	""	"314.8"	""	"503.7"	""	"501.4"	"517.1"	""	"834"	"21"	"36.000"	"29.000"	"0.306998359655305"	"21"	"9.9E-05"	"0.0008692"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"624.33191"	"1247.65654"	"1247.65817"	"-1.30"	"-0.00081"	"7/84"	"7"	"84"	"10456273.3094482"	"HCD"	"MS2"	"37.05885"	"385.4"	"78.831"	"52.7469"	"16468"	"16468"	"16452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"647.2"	""	"384.4"	""	"457.8"	""	"673.4"	""	"721.6"	"771.9"	""	"828"	"22"	"36.000"	"29.000"	"0.263633345655877"	"22"	"0.0001686"	"0.001428"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"624.33203"	"1247.65679"	"1247.65817"	"-1.11"	"-0.00069"	"7/84"	"7"	"84"	"9801338.91906738"	"HCD"	"MS2"	"32.81359"	"452.5"	"100.000"	"53.0460"	"16556"	"16556"	"16538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"758.1"	""	"490.0"	""	"533.1"	""	"781.7"	""	"817.7"	"915.7"	""	"808"	"19"	"36.000"	"29.000"	"0.528909496891761"	"24"	"0.0001991"	"0.005683"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDIGGLWR"	"[R].sDDIGGLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"624.33228"	"1247.65727"	"1247.65817"	"-0.72"	"-0.00045"	"6/68"	"6"	"68"	"788855.123962402"	"HCD"	"MS2"	"47.31984"	"45.0"	"100.000"	"85.9020"	"29908"	"29908"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.1"	""	"58.0"	""	"64.2"	""	"75.6"	"0.2"	"76.1"	"91.7"	""	"810"	"18"	"36.000"	"29.000"	"0.582713424193617"	"19"	"0.0001991"	"0.002202"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIANGDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"624.33234"	"1247.65740"	"1247.65817"	"-0.62"	"-0.00039"	"14/84"	"14"	"84"	"5679999.07873535"	"HCD"	"MS2"	"49.59543"	"273.7"	"100.000"	"52.4431"	"16344"	"16344"	"16326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"447.6"	""	"253.6"	""	"317.4"	""	"498.5"	""	"527.2"	"552.8"	""	"810"	"25"	"36.000"	"29.000"	"0.135973733768397"	"19"	"0.0001686"	"0.001532"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDIGGLWR"	"[R].sDDIGGLWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"Q8K4C0"	"Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Rattus norvegicus OX=10116 GN=Fmo5 PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"624.33282"	"1247.65837"	"1247.65817"	"0.17"	"0.00010"	"6/68"	"6"	"68"	"798956.850708008"	"HCD"	"MS2"	"45.60484"	"45.9"	"100.000"	"85.9259"	"29888"	"29888"	"29870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"49.4"	""	"64.7"	""	"79.1"	""	"92.9"	"90.1"	""	"834"	"19"	"36.000"	"29.000"	"0.578277180639577"	"29"	"0.0001991"	"0.003769"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQSVAEER"	"[R].sLQSVAEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"624.34241"	"1247.67754"	"1247.67930"	"-1.41"	"-0.00088"	"8/90"	"8"	"90"	"3257583.84057617"	"HCD"	"MS2"	"42.29057"	"189.8"	"100.000"	"41.3089"	"11823"	"11823"	"11798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"271.0"	""	"255.3"	""	"212.8"	""	"320.7"	""	"377.1"	"370.1"	""	"807"	"13"	"36.000"	"29.000"	"1.94914226623048"	"24"	"0.0005161"	"0.006995"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQSVAEER"	"[R].sLQSVAEER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"P61314"	"60S ribosomal protein L15 OS=Rattus norvegicus OX=10116 GN=Rpl15 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"624.34247"	"1247.67766"	"1247.67930"	"-1.31"	"-0.00082"	"8/90"	"8"	"90"	"2809651.58880615"	"HCD"	"MS2"	"26.6319"	"179.0"	"100.000"	"41.4024"	"11827"	"11827"	"11802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.7"	""	"226.4"	""	"211.4"	""	"316.3"	""	"368.8"	"335.2"	""	"808"	"22"	"36.000"	"29.000"	"0.249104380752039"	"24"	"0.0001991"	"0.00203"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAIVYGQPR"	"[K].dAIVYGQPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"Q3B7D2"	"Serine palmitoyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Sptlc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"624.35028"	"1247.69328"	"1247.69455"	"-1.02"	"-0.00063"	"6/68"	"6"	"68"	"906850.10925293"	"HCD"	"MS2"	"0"	"76.6"	"100.000"	"44.6550"	"13186"	"13186"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.1"	""	"96.0"	""	"94.5"	""	"123.8"	"3.1"	"145.0"	"156.8"	""	"925"	"28"	"36.000"	"29.000"	"0.0724622369925019"	"19"	"0.0001686"	"0.001252"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPGFIVNR"	"[K].dTPGFIVNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"624.35034"	"1247.69341"	"1247.69455"	"-0.92"	"-0.00057"	"6/68"	"6"	"68"	"1223744.1463623"	"HCD"	"MS2"	"24.00434"	"100.3"	"100.000"	"60.6305"	"19638"	"19638"	"19618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.9"	""	"127.5"	""	"123.8"	""	"193.2"	""	"201.1"	"175.8"	""	"924"	"12"	"36.000"	"29.000"	"2.60400596991591"	"22"	"0.001951"	"0.017"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPGFIVNR"	"[K].dTPGFIVNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"624.35046"	"1247.69365"	"1247.69455"	"-0.72"	"-0.00045"	"6/68"	"6"	"68"	"4107993.54321289"	"HCD"	"MS2"	"1.317869"	"180.6"	"100.000"	"60.1975"	"19495"	"19495"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"309.4"	""	"235.0"	""	"262.6"	""	"272.3"	""	"284.4"	"346.5"	""	"924"	"28"	"36.000"	"29.000"	"0.0759699736125298"	"24"	"0.002166"	"0.01978"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPGFIVNR"	"[K].dTPGFIVNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"624.35059"	"1247.69390"	"1247.69455"	"-0.53"	"-0.00033"	"6/68"	"6"	"68"	"6560232.02813721"	"HCD"	"MS2"	"0"	"283.0"	"100.000"	"59.8844"	"19368"	"19368"	"19353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"494.2"	""	"357.3"	""	"404.8"	""	"436.3"	"4.6"	"467.7"	"512.5"	""	"920"	"31"	"36.000"	"29.000"	"0.0334008740420171"	"23"	"9.9E-05"	"0.0009804"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPGFIVNR"	"[K].dTPGFIVNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"624.35071"	"1247.69414"	"1247.69455"	"-0.33"	"-0.00021"	"6/68"	"6"	"68"	"6863546.69549561"	"HCD"	"MS2"	"0"	"276.7"	"90.453"	"60.0296"	"19394"	"19394"	"19377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"494.7"	""	"347.8"	""	"412.9"	""	"411.1"	"1.3"	"460.2"	"488.7"	""	"920"	"31"	"36.000"	"29.000"	"0.0349750087392483"	"22"	"0.0001686"	"0.00104"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPGFIVNR"	"[K].dTPGFIVNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"624.35095"	"1247.69463"	"1247.69455"	"0.06"	"0.00004"	"6/68"	"6"	"68"	"4553807.36920166"	"HCD"	"MS2"	"0"	"196.0"	"100.000"	"60.3221"	"19513"	"19513"	"19496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"329.6"	""	"245.9"	""	"281.4"	""	"294.4"	"1.2"	"337.2"	"364.8"	""	"905"	"32"	"36.000"	"29.000"	"0.025859408309402"	"27"	"0.001348"	"0.01135"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTPGFIVNR"	"[K].dTPGFIVNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"416.57037"	"1247.69657"	"1247.69455"	"1.62"	"0.00067"	"8/68"	"8"	"68"	"338622.33203125"	"HCD"	"MS2"	"40.22194"	"16.0"	"100.000"	"59.9486"	"19394"	"19394"	"19367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"20.9"	""	"23.5"	""	"22.7"	""	"31.6"	"32.2"	""	"913"	"18"	"36.000"	"29.000"	"0.730198240062596"	"21"	"0.004959"	"0.06249"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQLLMDR"	"[K].nLQLLmDR.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.35217"	"1247.69707"	"1247.69792"	"-0.68"	"-0.00043"	"5/70"	"5"	"70"	"407047.569946289"	"HCD"	"MS2"	"32.35295"	"28.3"	"100.000"	"70.1719"	"23542"	"23542"	"23520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"34.8"	""	"38.4"	""	"45.5"	""	"54.5"	"63.4"	""	"926"	"2"	"36.000"	"29.000"	"28.2215583422198"	"13"	"0.00981"	"0.1314"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"624.35291"	"1247.69853"	"1247.69959"	"-0.84"	"-0.00053"	"9/76"	"9"	"76"	"336255.641479492"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"23.9488"	"4844"	"4844"	"4818"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"42.6"	""	"41.4"	""	"52.4"	""	"51.5"	"57.2"	""	"945"	"25"	"36.000"	"29.000"	"0.165730260442588"	"19"	"0.004314"	"0.05046"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"624.35327"	"1247.69927"	"1247.69959"	"-0.26"	"-0.00016"	"7/76"	"7"	"76"	"678205.365844727"	"HCD"	"MS2"	"0"	"63.8"	"100.000"	"24.0047"	"4829"	"4829"	"4807"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.1"	""	"79.8"	""	"87.3"	""	"117.4"	""	"114.5"	"123.3"	""	"918"	"48"	"36.000"	"29.000"	"0.000790337675918576"	"21"	"9.9E-05"	"0.0007207"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVK"	"[M].aGSTTIEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"624.35583"	"1247.70439"	"1247.70445"	"-0.04"	"-0.00003"	"7/80"	"7"	"80"	"3562561.80206299"	"HCD"	"MS2"	"3.67483"	"140.1"	"100.000"	"68.6154"	"22877"	"22877"	"22860"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.4"	""	"198.1"	""	"199.2"	""	"227.5"	"1.9"	"231.9"	"277.7"	""	"854"	"42"	"36.000"	"29.000"	"0.00266334774750993"	""	"9.9E-05"	"0.0005992"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GLSATVTGGQK"	"[K].gLSATVTGGQK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P60203"	"Myelin proteolipid protein OS=Rattus norvegicus OX=10116 GN=Plp1 PE=1 SV=2"	"P60203"	"Myelin proteolipid protein OS=Rattus norvegicus OX=10116 GN=Plp1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"4"	"4"	"6"	"624.36060"	"1247.71391"	"1247.71568"	"-1.42"	"-0.00088"	"5/90"	"5"	"90"	"1891888.2878418"	"HCD"	"MS2"	"30.03796"	"89.8"	"100.000"	"80.6839"	"27799"	"27799"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.2"	""	"118.3"	""	"116.0"	""	"164.0"	""	"198.5"	"171.7"	""	"871"	"6"	"36.000"	"29.000"	"12.2176634932797"	"18"	"0.005194"	"0.06602"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSATVTGGQK"	"[K].gLSATVTGGQK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P60203"	"Myelin proteolipid protein OS=Rattus norvegicus OX=10116 GN=Plp1 PE=1 SV=2"	"P60203"	"Myelin proteolipid protein OS=Rattus norvegicus OX=10116 GN=Plp1 PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"3"	"624.36139"	"1247.71550"	"1247.71568"	"-0.14"	"-0.00009"	"6/90"	"6"	"90"	"1843553.54864502"	"HCD"	"MS2"	"31.48075"	"90.1"	"100.000"	"80.6007"	"27738"	"27738"	"27721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.9"	""	"104.8"	""	"112.8"	""	"185.4"	""	"189.2"	"177.2"	""	"840"	"9"	"36.000"	"29.000"	"5.62664208718892"	"20"	"0.003568"	"0.03957"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEDGK"	"[R].lLDEDGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"624.36469"	"1247.72209"	"1247.72474"	"-2.12"	"-0.00132"	"6/52"	"6"	"52"	"1061452.57220459"	"HCD"	"MS2"	"28.40025"	"91.0"	"100.000"	"60.9642"	"19806"	"19806"	"19787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.2"	""	"103.1"	""	"122.9"	""	"155.1"	""	"179.6"	"173.0"	""	"905"	"22"	"36.000"	"29.000"	"0.320345467433822"	"18"	"0.002508"	"0.02337"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDEDGK"	"[R].lLDEDGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"624.36548"	"1247.72368"	"1247.72474"	"-0.85"	"-0.00053"	"6/52"	"6"	"52"	"1146207.37640381"	"HCD"	"MS2"	"15.54772"	"103.0"	"100.000"	"61.0448"	"19807"	"19807"	"19786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.7"	""	"113.9"	""	"133.9"	""	"177.8"	"1.5"	"206.8"	"198.3"	""	"882"	"21"	"36.000"	"29.000"	"0.372767970715688"	"17"	"0.002628"	"0.02782"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQEGQK"	"[R].iSQEGQk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"624.37054"	"1247.73381"	"1247.73597"	"-1.73"	"-0.00108"	"9/60"	"9"	"60"	"1497603.71722412"	"HCD"	"MS2"	"63.93428"	"131.5"	"100.000"	"30.4867"	"7458"	"7458"	"7446"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.4"	""	"166.0"	""	"188.8"	""	"168.3"	""	"231.0"	"238.7"	""	"819"	"5"	"36.000"	"29.000"	"13.1296728838499"	"15"	"0.006613"	"0.08243"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQEGQK"	"[R].iSQEGQk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.37115"	"1247.73503"	"1247.73597"	"-0.75"	"-0.00047"	"6/60"	"6"	"60"	"1016811.99536133"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"30.8152"	"7548"	"7548"	"7533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.8"	""	"95.2"	""	"109.6"	""	"146.1"	"1.8"	"161.2"	"152.5"	""	"791"	"21"	"35.000"	"28.000"	"0.345260176197498"	"21"	"0.002588"	"0.0269"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAVETK"	"[K].eLAVETk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"3"	"624.38202"	"1247.75676"	"1247.76112"	"-3.50"	"-0.00218"	"5/58"	"5"	"58"	"1044124.12158203"	"HCD"	"MS2"	"39.77748"	"94.6"	"100.000"	"50.9636"	"15713"	"15713"	"15685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.0"	""	"108.6"	""	"103.3"	""	"166.4"	""	"207.6"	"192.3"	""	"604"	"6"	"34.000"	"27.000"	"7.01466512499846"	"18"	"0.008135"	"0.1038"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAVETK"	"[K].eLAVETk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"624.38287"	"1247.75847"	"1247.76112"	"-2.13"	"-0.00133"	"6/58"	"6"	"58"	"1218331.63354492"	"HCD"	"MS2"	"31.1748"	"107.0"	"100.000"	"50.7299"	"15651"	"15651"	"15633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.7"	""	"125.1"	""	"142.0"	""	"189.8"	""	"207.7"	"210.0"	""	"603"	"25"	"34.000"	"27.000"	"0.0993773282215035"	"26"	"0.001217"	"0.009351"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"624.38330"	"1247.75932"	"1247.76112"	"-1.44"	"-0.00090"	"6/54"	"6"	"54"	"865787.40057373"	"HCD"	"MS2"	"40.96369"	"66.6"	"100.000"	"75.0353"	"25512"	"25512"	"25488"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.2"	""	"90.2"	""	"92.1"	""	"120.6"	""	"105.1"	"122.8"	""	"602"	"32"	"34.000"	"27.000"	"0.0174006910269121"	"27"	"0.0001991"	"0.005144"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDVSK"	"[R].dLLDVSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"624.38348"	"1247.75969"	"1247.76112"	"-1.15"	"-0.00072"	"6/58"	"6"	"58"	"637454.309997559"	"HCD"	"MS2"	"38.47767"	"44.3"	"100.000"	"85.4464"	"29695"	"29695"	"29676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.4"	""	"58.0"	""	"53.3"	""	"78.7"	""	"88.5"	"90.1"	""	"602"	"22"	"34.000"	"27.000"	"0.179707621261735"	""	"0.001261"	"0.009618"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDVSK"	"[R].dLLDVSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"624.38354"	"1247.75981"	"1247.76112"	"-1.05"	"-0.00066"	"6/58"	"6"	"58"	"859215.560668945"	"HCD"	"MS2"	"23.23721"	"59.5"	"100.000"	"85.1582"	"29578"	"29578"	"29559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.5"	""	"71.5"	""	"78.6"	""	"95.6"	"0.1"	"118.3"	"115.3"	""	"602"	"33"	"34.000"	"27.000"	"0.0164651804831085"	""	"0.0001991"	"0.004335"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"624.38361"	"1247.75994"	"1247.76112"	"-0.95"	"-0.00059"	"12/54"	"12"	"54"	"3614920.6552124"	"HCD"	"MS2"	"21.36112"	"223.9"	"100.000"	"75.8246"	"25802"	"25802"	"25787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.9"	""	"274.1"	""	"304.5"	""	"384.9"	""	"411.2"	"469.6"	""	"600"	"35"	"34.000"	"27.000"	"0.0101653246841761"	"22"	"0.00212"	"0.01946"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDVSK"	"[R].dLLDVSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"624.38373"	"1247.76018"	"1247.76112"	"-0.76"	"-0.00047"	"6/58"	"6"	"58"	"631838.274475098"	"HCD"	"MS2"	"31.94467"	"45.8"	"100.000"	"85.4340"	"29720"	"29720"	"29699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.4"	""	"48.3"	""	"65.8"	""	"83.3"	""	"93.3"	"85.1"	""	"600"	"28"	"34.000"	"27.000"	"0.0472194859339866"	""	"0.0001991"	"0.004482"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAVETK"	"[K].eLAVETk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.38373"	"1247.76018"	"1247.76112"	"-0.76"	"-0.00047"	"12/58"	"12"	"58"	"1411508.16644287"	"HCD"	"MS2"	"2.906031"	"114.2"	"100.000"	"51.0267"	"15772"	"15772"	"15750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.2"	""	"138.0"	""	"143.1"	""	"203.3"	""	"236.3"	"213.6"	""	"600"	"45"	"34.000"	"27.000"	"0.00105954950937587"	""	"0.0001991"	"0.002575"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAVETK"	"[K].eLAVETk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"624.38373"	"1247.76018"	"1247.76112"	"-0.76"	"-0.00047"	"12/58"	"12"	"58"	"2026586.65557861"	"HCD"	"MS2"	"0"	"150.1"	"100.000"	"51.2843"	"15840"	"15840"	"15821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.9"	""	"163.2"	""	"195.4"	""	"289.0"	"0.7"	"320.8"	"261.6"	""	"600"	"45"	"34.000"	"27.000"	"0.0010402105513576"	""	"0.0003938"	"0.006306"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"624.38379"	"1247.76030"	"1247.76112"	"-0.66"	"-0.00041"	"6/54"	"6"	"54"	"3375603.86547852"	"HCD"	"MS2"	"24.14242"	"216.7"	"100.000"	"75.9475"	"25883"	"25883"	"25865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"268.7"	""	"275.5"	""	"294.1"	""	"376.3"	""	"398.7"	"442.5"	""	"600"	"32"	"34.000"	"27.000"	"0.0176653096606677"	"23"	"0.001827"	"0.0153"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"624.38397"	"1247.76067"	"1247.76112"	"-0.37"	"-0.00023"	"6/54"	"6"	"54"	"946537.179077148"	"HCD"	"MS2"	"45.97148"	"67.8"	"100.000"	"74.9328"	"25439"	"25439"	"25419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.6"	""	"92.4"	""	"97.4"	""	"114.7"	""	"118.8"	"131.0"	""	"600"	"30"	"34.000"	"27.000"	"0.029793481452628"	"20"	"0.0005161"	"0.006533"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"624.38397"	"1247.76067"	"1247.76112"	"-0.37"	"-0.00023"	"12/54"	"12"	"54"	"15426537.3770142"	"HCD"	"MS2"	"3.680684"	"677.4"	"68.758"	"75.3398"	"25636"	"25636"	"25623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"938.1"	""	"914.2"	""	"959.9"	""	"1152.8"	""	"1129.3"	"1324.2"	""	"600"	"36"	"34.000"	"27.000"	"0.00748378418082887"	"23"	"0.002189"	"0.0209"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"624.38403"	"1247.76079"	"1247.76112"	"-0.27"	"-0.00017"	"6/54"	"6"	"54"	"430969.223449707"	"HCD"	"MS2"	"47.33419"	"33.0"	"100.000"	"76.6023"	"26150"	"26150"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"49.8"	""	"48.0"	""	"55.4"	"0.9"	"55.1"	"62.6"	""	"591"	"16"	"34.000"	"27.000"	"0.664595636024474"	"16"	"0.006814"	"0.08515"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLDVSK"	"[R].dLLDVSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"P56536; Q2PQA9"	"Kinesin heavy chain isoform 5C (Fragment) OS=Rattus norvegicus OX=10116 GN=Kif5c PE=1 SV=2; Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"624.38403"	"1247.76079"	"1247.76112"	"-0.27"	"-0.00017"	"12/58"	"12"	"58"	"973292.467773438"	"HCD"	"MS2"	"20.29145"	"68.6"	"100.000"	"85.1300"	"29596"	"29596"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.6"	""	"92.2"	""	"93.6"	""	"109.5"	""	"138.5"	"129.1"	""	"591"	"39"	"34.000"	"27.000"	"0.00370303217195188"	""	"0.0001991"	"0.002793"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"624.38409"	"1247.76091"	"1247.76112"	"-0.17"	"-0.00011"	"12/54"	"12"	"54"	"21337758.6848145"	"HCD"	"MS2"	"1.830922"	"597.6"	"42.672"	"75.6486"	"25762"	"25762"	"25745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"781.6"	""	"772.7"	""	"866.2"	""	"927.7"	""	"1027.7"	"1294.1"	""	"546"	"34"	"34.000"	"27.000"	"0.01040309697865"	"22"	"0.00296"	"0.03183"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"624.38422"	"1247.76116"	"1247.76112"	"0.03"	"0.00002"	"12/54"	"12"	"54"	"13995222.7592773"	"HCD"	"MS2"	"3.770377"	"889.0"	"93.090"	"75.2142"	"25554"	"25554"	"25537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1248.6"	""	"1212.8"	""	"1270.1"	""	"1462.0"	""	"1480.5"	"1745.9"	""	"540"	"34"	"34.000"	"27.000"	"0.00991662211344828"	"23"	"0.002525"	"0.02365"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDDVIK"	"[K].sIDDVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"624.38446"	"1247.76164"	"1247.76112"	"0.42"	"0.00026"	"12/54"	"12"	"54"	"20856501.6689453"	"HCD"	"MS2"	"1.730868"	"738.7"	"52.759"	"75.5183"	"25678"	"25678"	"25661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1004.0"	""	"941.1"	""	"1072.5"	""	"1156.2"	""	"1261.8"	"1572.7"	""	"540"	"34"	"34.000"	"27.000"	"0.0102179497873615"	"27"	"0.00307"	"0.03388"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"624.82397"	"1248.64067"	"1248.64218"	"-1.21"	"-0.00076"	"7/84"	"7"	"84"	"1296756.05517578"	"HCD"	"MS2"	"5.56919"	"74.8"	"100.000"	"58.9568"	"18957"	"18957"	"18933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.5"	""	"82.8"	""	"93.3"	""	"140.0"	""	"146.5"	"136.5"	""	"703"	"30"	"35.000"	"28.000"	"0.0331074193177779"	"20"	"0.0001686"	"0.001238"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"624.82422"	"1248.64116"	"1248.64218"	"-0.82"	"-0.00051"	"8/84"	"8"	"84"	"731681.959594727"	"HCD"	"MS2"	"22.14175"	"51.9"	"100.000"	"58.4502"	"18786"	"18786"	"18763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"54.2"	""	"70.5"	""	"86.6"	"1.3"	"103.5"	"100.2"	""	"709"	"34"	"35.000"	"28.000"	"0.0131104089732104"	"19"	"0"	"0.0002859"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"624.82428"	"1248.64128"	"1248.64218"	"-0.72"	"-0.00045"	"4/84"	"4"	"84"	"469745.603271484"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"58.6320"	"18825"	"18825"	"18797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"42.2"	""	"53.9"	""	"60.7"	""	"68.3"	"84.2"	""	"709"	"16"	"35.000"	"28.000"	"0.994526224653882"	"13"	"0.002328"	"0.02224"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFPIANGDR"	"[K].eFPIAnGDR.[Q]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"624.82434"	"1248.64141"	"1248.64218"	"-0.62"	"-0.00039"	"10/84"	"10"	"84"	"1160540.58184814"	"HCD"	"MS2"	"11.52373"	"66.4"	"100.000"	"58.7518"	"18909"	"18909"	"18887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.6"	""	"65.6"	""	"82.9"	""	"115.6"	"1.0"	"119.5"	"124.2"	""	"711"	"28"	"35.000"	"28.000"	"0.0522203291702395"	"21"	"0.0001991"	"0.002601"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGFTPQER"	"[K].nAGFTPQER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"624.83069"	"1248.65410"	"1248.65342"	"0.55"	"0.00034"	"6/86"	"6"	"86"	"1378759.42047119"	"HCD"	"MS2"	"0"	"95.9"	"100.000"	"31.7885"	"7974"	"7974"	"7951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.6"	""	"136.9"	""	"114.5"	""	"153.6"	"6.6"	"169.0"	"169.5"	""	"744"	"34"	"35.000"	"28.000"	"0.0153300277104207"	"21"	"0.002035"	"0.01858"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNIELDPR"	"[K].yNIELDPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"624.84045"	"1248.67363"	"1248.67857"	"-3.95"	"-0.00247"	"6/72"	"6"	"72"	"504922.174743652"	"HCD"	"MS2"	"57.63938"	"25.2"	"100.000"	"71.9136"	"24217"	"24217"	"24191"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"25.0"	""	"28.2"	""	"36.5"	""	"54.6"	"67.9"	""	"854"	"33"	"36.000"	"29.000"	"0.0234114264021205"	"17"	"0.001872"	"0.01571"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNIELDPR"	"[K].yNIELDPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"P19139"	"Casein kinase II subunit alpha OS=Rattus norvegicus OX=10116 GN=Csnk2a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"624.84180"	"1248.67632"	"1248.67857"	"-1.80"	"-0.00113"	"6/72"	"6"	"72"	"551256.475524902"	"HCD"	"MS2"	"55.45566"	"28.3"	"100.000"	"71.9891"	"24279"	"24279"	"24250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"28.7"	""	"33.8"	""	"47.5"	""	"60.6"	"67.4"	""	"878"	"33"	"36.000"	"29.000"	"0.020112428826768"	"24"	"0.0005778"	"0.00702"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"624.84253"	"1248.67778"	"1248.67857"	"-0.63"	"-0.00039"	"8/72"	"8"	"72"	"1799027.43603516"	"HCD"	"MS2"	"14.07797"	"100.3"	"100.000"	"59.3204"	"19105"	"19105"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.6"	""	"121.7"	""	"131.0"	""	"155.7"	"0.4"	"181.8"	"206.6"	""	"838"	"39"	"36.000"	"29.000"	"0.00549811757689046"	"22"	"0"	"0.0003209"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"624.84253"	"1248.67778"	"1248.67857"	"-0.63"	"-0.00039"	"8/72"	"8"	"72"	"6286493.28997803"	"HCD"	"MS2"	"0"	"274.2"	"100.000"	"59.6102"	"19223"	"19223"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"463.8"	""	"349.4"	""	"344.4"	""	"399.1"	""	"481.7"	"562.2"	""	"838"	"39"	"36.000"	"29.000"	"0.00487768806322996"	"21"	"9.9E-05"	"0.0005282"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"624.84283"	"1248.67839"	"1248.67857"	"-0.14"	"-0.00009"	"6/72"	"6"	"72"	"1156010.70605469"	"HCD"	"MS2"	"36.14496"	"73.5"	"100.000"	"59.0717"	"19039"	"19039"	"19014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.0"	""	"83.3"	""	"95.2"	""	"114.0"	""	"145.8"	"156.6"	""	"825"	"31"	"36.000"	"29.000"	"0.0310759170040158"	"27"	"9.9E-05"	"0.0004585"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"624.84290"	"1248.67851"	"1248.67857"	"-0.04"	"-0.00003"	"12/72"	"12"	"72"	"5392274.1114502"	"HCD"	"MS2"	"0"	"249.9"	"100.000"	"59.3777"	"19163"	"19163"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"414.4"	""	"309.5"	""	"345.3"	""	"363.3"	""	"425.1"	"513.5"	""	"824"	"43"	"36.000"	"29.000"	"0.00200399768744882"	"21"	"0"	"0.0002971"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"624.84332"	"1248.67937"	"1248.67857"	"0.64"	"0.00040"	"10/72"	"10"	"72"	"6786055.78985596"	"HCD"	"MS2"	"15.1784"	"314.1"	"100.000"	"59.6519"	"19274"	"19274"	"19259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"525.8"	""	"376.4"	""	"423.9"	""	"486.0"	""	"539.4"	"627.9"	""	"830"	"30"	"36.000"	"29.000"	"0.0421743207541339"	"25"	"0.0001686"	"0.001044"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPLEAVR"	"[K].gDYPLEAVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"624.84332"	"1248.67937"	"1248.67857"	"0.64"	"0.00040"	"11/72"	"11"	"72"	"7546908.99584961"	"HCD"	"MS2"	"25.09237"	"349.2"	"100.000"	"59.8957"	"19339"	"19339"	"19321"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"585.1"	""	"436.3"	""	"443.4"	""	"547.7"	""	"618.5"	"684.6"	""	"830"	"27"	"36.000"	"29.000"	"0.0871060051703763"	"21"	"0.0001686"	"0.001504"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"624.84473"	"1248.68218"	"1248.68360"	"-1.14"	"-0.00071"	"6/76"	"6"	"76"	"908412.714660645"	"HCD"	"MS2"	"0"	"72.5"	"100.000"	"27.3117"	"6139"	"6139"	"6129"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.8"	""	"75.7"	""	"98.1"	""	"127.0"	""	"127.8"	"146.8"	""	"869"	"29"	"36.000"	"29.000"	"0.0529650980732854"	""	"0.0001991"	"0.002574"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDTASPK"	"[K].nGDTASPk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"624.84479"	"1248.68230"	"1248.68360"	"-1.04"	"-0.00065"	"6/76"	"6"	"76"	"978148.80480957"	"HCD"	"MS2"	"0"	"78.8"	"100.000"	"27.0792"	"6084"	"6084"	"6070"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.5"	""	"93.6"	""	"91.1"	""	"138.8"	""	"153.0"	"149.4"	""	"870"	"32"	"36.000"	"29.000"	"0.0294774055810644"	""	"0.0004582"	"0.006391"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGLQK"	"[R].sEEGLQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"624.86353"	"1248.71977"	"1248.71999"	"-0.17"	"-0.00011"	"6/54"	"6"	"54"	"2755678.43682861"	"HCD"	"MS2"	"0"	"214.8"	"100.000"	"35.4242"	"9444"	"9444"	"9421"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.2"	""	"255.4"	""	"258.1"	""	"386.5"	""	"423.0"	"428.6"	""	"727"	"34"	"35.000"	"28.000"	"0.0150488881796972"	"25"	"0.002462"	"0.02306"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGLQK"	"[R].sEEGLQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"624.86383"	"1248.72038"	"1248.71999"	"0.32"	"0.00020"	"9/54"	"9"	"54"	"2332979.55419922"	"HCD"	"MS2"	"15.33525"	"208.3"	"100.000"	"35.8051"	"9561"	"9561"	"9547"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"269.7"	"3.2"	"232.6"	""	"249.0"	""	"379.3"	""	"405.5"	"444.7"	""	"729"	"16"	"35.000"	"28.000"	"0.854471403184112"	"26"	"0.00511"	"0.06506"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGLQK"	"[R].sEEGLQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"P16232"	"Corticosteroid 11-beta-dehydrogenase isozyme 1 OS=Rattus norvegicus OX=10116 GN=Hsd11b1 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"624.86389"	"1248.72051"	"1248.71999"	"0.42"	"0.00026"	"6/54"	"6"	"54"	"1915106.10284424"	"HCD"	"MS2"	"0"	"154.4"	"100.000"	"35.5139"	"9443"	"9443"	"9422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.6"	""	"184.1"	""	"191.8"	""	"286.2"	""	"317.5"	"285.3"	""	"727"	"31"	"35.000"	"28.000"	"0.0279578915044182"	"24"	"0.001872"	"0.01546"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGQETDK"	"[K].iGQETDk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"624.86389"	"1248.72051"	"1248.71999"	"0.42"	"0.00026"	"5/60"	"5"	"60"	"2922301.57971191"	"HCD"	"MS2"	"10.96827"	"232.6"	"100.000"	"35.7503"	"9576"	"9576"	"9555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"308.1"	""	"259.4"	""	"267.2"	""	"409.6"	"0.2"	"479.2"	"484.7"	""	"727"	"27"	"35.000"	"28.000"	"0.0740464795246028"	"18"	"0.002628"	"0.02767"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGISAAK"	"[K].eDGISAAk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"624.86444"	"1248.72161"	"1248.71999"	"1.30"	"0.00081"	"6/64"	"6"	"64"	"492166.2890625"	"HCD"	"MS2"	"100"	"52.6"	"100.000"	"39.5984"	"11100"	"11100"	"11079"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.7"	""	"61.1"	""	"70.3"	""	"86.8"	""	"117.8"	"103.4"	""	"728"	"13"	"35.000"	"28.000"	"2.02349149646427"	"23"	"0.003357"	"0.03785"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSDVQK"	"[K].tLSDVQk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"624.87805"	"1248.74883"	"1248.75637"	"-6.04"	"-0.00377"	"6/56"	"6"	"56"	"1072088.35119629"	"HCD"	"MS2"	"0"	"91.5"	"100.000"	"46.3891"	"13889"	"13889"	"13874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.0"	""	"106.3"	""	"104.8"	""	"162.6"	""	"191.2"	"191.9"	""	"647"	"21"	"35.000"	"28.000"	"0.279173560202615"	"21"	"0.003208"	"0.03469"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSDVQK"	"[K].tLSDVQk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"624.87830"	"1248.74932"	"1248.75637"	"-5.65"	"-0.00353"	"6/56"	"6"	"56"	"1263603.32165527"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"46.6046"	"13976"	"13976"	"13951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.0"	""	"138.3"	""	"122.1"	""	"157.9"	""	"206.4"	"224.4"	""	"656"	"17"	"35.000"	"28.000"	"0.677444691105854"	"18"	"0.004392"	"0.05191"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"625.29730"	"1249.58733"	"1249.58815"	"-0.66"	"-0.00041"	"7/96"	"7"	"96"	"162674.693481445"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"114.4913"	"41338"	"41338"	"41310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.4"	""	"6.4"	""	"9.9"	""	"12.8"	""	"9.6"	"11.2"	"NoQuanLabels"	"285"	"53"	"31.000"	"24.000"	"6.4686680372654E-05"	"16"	"0"	"0.0001442"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGPLSVFGDR"	"[-].mEGPLSVFGDR.[S]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.29761"	"1249.58794"	"1249.58815"	"-0.17"	"-0.00011"	"9/96"	"9"	"96"	"189368.780090332"	"HCD"	"MS2"	"14.84002"	"6.5"	"100.000"	"114.4149"	"41294"	"41294"	"41268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"6.7"	""	"8.5"	""	"14.1"	""	"14.5"	"11.6"	"NoQuanLabels"	"283"	"68"	"31.000"	"24.000"	"2.43084036782799E-06"	"17"	"0"	"3.804E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNEWDSR"	"[K].tLNEWDSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"625.32190"	"1249.63652"	"1249.63743"	"-0.73"	"-0.00045"	"6/78"	"6"	"78"	"1587099.45562744"	"HCD"	"MS2"	"6.272854"	"101.4"	"100.000"	"51.7609"	"16066"	"16066"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.7"	""	"129.1"	""	"131.8"	""	"157.2"	""	"206.3"	"202.9"	""	"639"	"49"	"35.000"	"28.000"	"0.000432983017246156"	"27"	"0"	"0.0002509"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNEWDSR"	"[K].tLNEWDSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"625.32208"	"1249.63689"	"1249.63743"	"-0.43"	"-0.00027"	"6/78"	"6"	"78"	"1418036.11706543"	"HCD"	"MS2"	"11.38161"	"88.2"	"100.000"	"52.0929"	"16167"	"16167"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.0"	""	"105.8"	""	"113.2"	""	"144.7"	""	"174.4"	"171.2"	""	"637"	"30"	"35.000"	"28.000"	"0.0285173677827545"	"24"	"0.0001991"	"0.002486"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSDFASK"	"[K].hSDFASk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"625.34955"	"1249.69182"	"1249.69411"	"-1.83"	"-0.00114"	"6/56"	"6"	"56"	"1362397.43139648"	"HCD"	"MS2"	"0"	"119.8"	"100.000"	"26.1787"	"5745"	"5745"	"5715"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.5"	""	"164.6"	""	"153.8"	""	"239.7"	"3.0"	"186.8"	"182.5"	""	"826"	"31"	"36.000"	"29.000"	"0.0323556442462445"	"17"	"0.001615"	"0.01314"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSDFASK"	"[K].hSDFASk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"417.23560"	"1249.69223"	"1249.69411"	"-1.50"	"-0.00062"	"9/56"	"9"	"56"	"19425436.3286133"	"HCD"	"MS2"	"36.52577"	"565.3"	"47.449"	"26.5297"	"5847"	"5847"	"5838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"884.6"	""	"746.7"	""	"776.1"	""	"912.8"	""	"989.9"	"1044.9"	""	"826"	"14"	"36.000"	"29.000"	"1.61046040497412"	"16"	"0.002525"	"0.02363"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSDFASK"	"[K].hSDFASk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"625.35028"	"1249.69328"	"1249.69411"	"-0.66"	"-0.00041"	"6/56"	"6"	"56"	"1348588.08581543"	"HCD"	"MS2"	"0"	"116.6"	"100.000"	"26.3899"	"5791"	"5791"	"5762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.2"	""	"139.5"	"3.0"	"151.9"	""	"230.7"	""	"182.6"	"195.4"	""	"803"	"28"	"36.000"	"29.000"	"0.0651156754089611"	"15"	"0.001872"	"0.01552"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDQALSFLK"	"[M].gDQALSFLk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q05962"	"ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q05962"	"ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"625.35236"	"1249.69744"	"1249.69897"	"-1.23"	"-0.00077"	"6/84"	"6"	"84"	"4940644.16070557"	"HCD"	"MS2"	"3.10919"	"163.0"	"100.000"	"112.8558"	"40668"	"40668"	"40649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.9"	""	"207.6"	""	"207.2"	""	"268.1"	"1.3"	"312.6"	"368.2"	""	"817"	"42"	"36.000"	"29.000"	"0.00268653226559689"	"27"	"0.000264"	"0.006045"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDQALSFLK"	"[M].gDQALSFLk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q05962"	"ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"Q05962"	"ADP/ATP translocase 1 OS=Rattus norvegicus OX=10116 GN=Slc25a4 PE=1 SV=3"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"625.35278"	"1249.69829"	"1249.69897"	"-0.54"	"-0.00034"	"6/84"	"6"	"84"	"3981466.28179932"	"HCD"	"MS2"	"7.990193"	"137.8"	"100.000"	"112.9161"	"40706"	"40706"	"40687"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.3"	""	"180.7"	""	"167.6"	""	"237.0"	""	"272.7"	"320.7"	""	"832"	"39"	"36.000"	"29.000"	"0.00548394803239465"	"26"	"0.000264"	"0.006141"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVEDEK"	"[K].aTVEDEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"625.35522"	"1249.70317"	"1249.70400"	"-0.66"	"-0.00042"	"12/56"	"12"	"56"	"4018346.3046875"	"HCD"	"MS2"	"0"	"313.9"	"100.000"	"32.8260"	"8354"	"8354"	"8329"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"336.8"	""	"242.5"	""	"286.8"	""	"564.0"	""	"814.5"	"750.4"	""	"766"	"39"	"35.000"	"28.000"	"0.00515464515603428"	""	"0.001348"	"0.01099"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVEDEK"	"[K].aTVEDEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"625.35541"	"1249.70354"	"1249.70400"	"-0.37"	"-0.00023"	"12/56"	"12"	"56"	"4031999.03155518"	"HCD"	"MS2"	"0"	"307.3"	"100.000"	"32.6972"	"8339"	"8339"	"8315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.8"	""	"227.2"	""	"284.7"	""	"579.9"	""	"767.5"	"740.8"	""	"766"	"39"	"35.000"	"28.000"	"0.0052384014020321"	""	"0.001261"	"0.01017"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYSQPSAR"	"[K].vIYSQPSAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"625.35706"	"1249.70683"	"1249.71020"	"-2.69"	"-0.00168"	"6/78"	"6"	"78"	"1137693.55328369"	"HCD"	"MS2"	"0"	"65.6"	"100.000"	"39.8604"	"11239"	"11239"	"11222"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.2"	""	"81.2"	""	"87.4"	""	"96.2"	"0.4"	"136.8"	"135.1"	""	"724"	"23"	"35.000"	"28.000"	"0.198019778567618"	"20"	"0.002525"	"0.02389"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEAGAAGLR"	"[R].yLEAGAAGLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"625.35736"	"1249.70745"	"1249.71020"	"-2.21"	"-0.00138"	"8/72"	"8"	"72"	"1579664.91870117"	"HCD"	"MS2"	"11.53499"	"92.0"	"100.000"	"63.7281"	"20927"	"20927"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.0"	""	"142.3"	""	"133.3"	""	"133.9"	""	"151.9"	"182.4"	""	"726"	"51"	"35.000"	"28.000"	"0.000303323895617943"	"23"	"0"	"1.936E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEAGAAGLR"	"[R].yLEAGAAGLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"625.35748"	"1249.70769"	"1249.71020"	"-2.01"	"-0.00126"	"9/72"	"9"	"72"	"884676.985290527"	"HCD"	"MS2"	"18.24008"	"56.5"	"100.000"	"63.8007"	"20924"	"20924"	"20908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.8"	""	"85.5"	""	"87.7"	""	"78.4"	""	"104.0"	"112.8"	""	"741"	"31"	"35.000"	"28.000"	"0.0263504606808559"	"19"	"0"	"0.0002423"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"417.24084"	"1249.70798"	"1249.71020"	"-1.78"	"-0.00074"	"10/82"	"10"	"82"	"3346907.18334961"	"HCD"	"MS2"	"15.3157"	"69.4"	"100.000"	"42.3341"	"12206"	"12206"	"12184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.5"	""	"101.4"	""	"90.4"	""	"126.6"	"1.0"	"121.9"	"115.2"	""	"741"	"28"	"35.000"	"28.000"	"0.0613462771465461"	"21"	"0.0005778"	"0.007037"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"417.24091"	"1249.70816"	"1249.71020"	"-1.63"	"-0.00068"	"9/82"	"9"	"82"	"1627295.48730469"	"HCD"	"MS2"	"5.632146"	"50.2"	"100.000"	"43.3480"	"12620"	"12620"	"12594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.0"	""	"68.8"	""	"68.8"	""	"89.1"	""	"89.7"	"95.4"	""	"741"	"25"	"35.000"	"28.000"	"0.120167828227934"	"17"	"0.004114"	"0.04493"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEAGAAGLR"	"[R].yLEAGAAGLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"625.35773"	"1249.70818"	"1249.71020"	"-1.62"	"-0.00101"	"8/72"	"8"	"72"	"952157.937011719"	"HCD"	"MS2"	"8.192811"	"60.8"	"100.000"	"63.5158"	"20808"	"20808"	"20789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.3"	""	"86.2"	""	"91.7"	""	"94.2"	""	"109.0"	"112.3"	""	"741"	"43"	"35.000"	"28.000"	"0.00184411589984696"	"20"	"0"	"3.047E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"417.24109"	"1249.70871"	"1249.71020"	"-1.19"	"-0.00050"	"9/82"	"9"	"82"	"3420607.54052734"	"HCD"	"MS2"	"6.321295"	"63.8"	"100.000"	"42.1889"	"12181"	"12181"	"12161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.1"	""	"86.8"	""	"86.3"	""	"114.8"	""	"113.0"	"112.4"	""	"708"	"32"	"35.000"	"28.000"	"0.0199987689083555"	"21"	"0.001615"	"0.01422"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYSQPSAR"	"[K].vIYSQPSAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"625.35822"	"1249.70915"	"1249.71020"	"-0.84"	"-0.00052"	"5/78"	"5"	"78"	"1023288.58068848"	"HCD"	"MS2"	"0"	"60.8"	"100.000"	"39.9378"	"11236"	"11236"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.6"	""	"77.2"	""	"80.7"	""	"97.4"	"1.0"	"126.0"	"126.4"	""	"715"	"29"	"35.000"	"28.000"	"0.0420994135533688"	"20"	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYSQPSAR"	"[K].vIYSQPSAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"625.35828"	"1249.70928"	"1249.71020"	"-0.74"	"-0.00046"	"6/78"	"6"	"78"	"3149573.96209717"	"HCD"	"MS2"	"0"	"146.3"	"100.000"	"40.2434"	"11360"	"11360"	"11342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.8"	""	"186.6"	""	"183.6"	""	"213.7"	""	"320.0"	"315.0"	""	"715"	"29"	"35.000"	"28.000"	"0.0405766366602852"	"21"	"0.002628"	"0.02735"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"625.35828"	"1249.70928"	"1249.71020"	"-0.74"	"-0.00046"	"8/82"	"8"	"82"	"9219278.4487915"	"HCD"	"MS2"	"0"	"302.7"	"100.000"	"42.3871"	"12228"	"12228"	"12216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"511.5"	""	"457.0"	""	"394.5"	""	"623.7"	""	"427.3"	"444.7"	""	"715"	"27"	"35.000"	"28.000"	"0.0782124780561964"	"24"	"0.0001686"	"0.001286"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIYSQPSAR"	"[K].vIYSQPSAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"625.35834"	"1249.70940"	"1249.71020"	"-0.64"	"-0.00040"	"5/78"	"5"	"78"	"3317360.27813721"	"HCD"	"MS2"	"0"	"150.0"	"100.000"	"40.1499"	"11356"	"11356"	"11341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.6"	""	"180.3"	""	"189.8"	""	"230.7"	""	"333.7"	"319.9"	""	"715"	"33"	"35.000"	"28.000"	"0.0190228702687879"	"22"	"9.9E-05"	"0.0007166"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"625.35834"	"1249.70940"	"1249.71020"	"-0.64"	"-0.00040"	"7/82"	"7"	"82"	"7352639.96697998"	"HCD"	"MS2"	"6.792542"	"287.3"	"100.000"	"43.2929"	"12597"	"12597"	"12578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"477.6"	""	"408.6"	""	"380.2"	""	"567.8"	""	"414.1"	"469.7"	""	"715"	"20"	"35.000"	"28.000"	"0.326043875069738"	"20"	"0.0001686"	"0.001747"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"417.24133"	"1249.70945"	"1249.71020"	"-0.61"	"-0.00025"	"9/82"	"9"	"82"	"2190324.96124268"	"HCD"	"MS2"	"3.846275"	"64.8"	"100.000"	"43.2080"	"12597"	"12597"	"12571"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.9"	""	"85.0"	""	"85.5"	""	"121.5"	""	"111.8"	"118.3"	""	"715"	"29"	"35.000"	"28.000"	"0.0411411139047635"	"19"	"0.00192"	"0.01587"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEAGAAGLR"	"[R].yLEAGAAGLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"Q6IMX7"	"Hsp70-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Hspbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"8/72"	"8"	"72"	"681052.699829102"	"HCD"	"MS2"	"24.59781"	"48.4"	"100.000"	"63.4338"	"20807"	"20807"	"20782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.0"	""	"65.7"	""	"68.2"	""	"73.9"	""	"95.5"	"97.0"	""	"715"	"44"	"35.000"	"28.000"	"0.00143309851551761"	"21"	"0"	"8.874E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"7/82"	"7"	"82"	"1955059.56164551"	"HCD"	"MS2"	"10.12259"	"124.2"	"100.000"	"44.0442"	"12903"	"12903"	"12881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.1"	""	"164.7"	""	"166.4"	""	"239.0"	""	"187.5"	"204.6"	""	"715"	"18"	"35.000"	"28.000"	"0.627012279408429"	"20"	"0.0001991"	"0.004259"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"6/82"	"6"	"82"	"3285473.90686035"	"HCD"	"MS2"	"24.55921"	"137.8"	"100.000"	"42.1108"	"12115"	"12115"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.9"	""	"200.5"	""	"188.1"	""	"268.6"	"0.1"	"220.4"	"213.3"	""	"715"	"21"	"35.000"	"28.000"	"0.278789264512065"	"21"	"0.005082"	"0.06427"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"8/82"	"8"	"82"	"7280454.36560059"	"HCD"	"MS2"	"6.562657"	"267.6"	"100.000"	"43.1503"	"12573"	"12573"	"12555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"475.2"	""	"401.7"	""	"365.9"	""	"512.5"	""	"385.6"	"388.4"	""	"715"	"21"	"35.000"	"28.000"	"0.272443246084085"	"19"	"0.0001686"	"0.001463"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"7/82"	"7"	"82"	"4534813.33514404"	"HCD"	"MS2"	"3.07704"	"194.2"	"100.000"	"43.5943"	"12720"	"12720"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"324.7"	""	"285.0"	""	"269.4"	""	"356.0"	""	"293.1"	"307.7"	""	"715"	"18"	"35.000"	"28.000"	"0.554978356060014"	"19"	"0.0001686"	"0.001668"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"625.35840"	"1249.70952"	"1249.71020"	"-0.55"	"-0.00034"	"7/82"	"7"	"82"	"11829317.380249"	"HCD"	"MS2"	"2.270164"	"285.7"	"68.230"	"42.9939"	"12475"	"12475"	"12457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"476.5"	""	"398.7"	""	"381.0"	""	"596.0"	""	"416.1"	"433.3"	""	"715"	"21"	"35.000"	"28.000"	"0.26440888583332"	"23"	"0.0001991"	"0.002241"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"625.35846"	"1249.70964"	"1249.71020"	"-0.45"	"-0.00028"	"8/82"	"8"	"82"	"11466513.4634399"	"HCD"	"MS2"	"2.287371"	"309.6"	"75.727"	"42.8374"	"12445"	"12445"	"12427"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"526.5"	""	"451.6"	""	"398.5"	""	"624.5"	""	"447.3"	"478.4"	""	"713"	"22"	"35.000"	"28.000"	"0.216800127955863"	"23"	"0.0001686"	"0.001722"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"625.35852"	"1249.70976"	"1249.71020"	"-0.35"	"-0.00022"	"7/82"	"7"	"82"	"4340187.79858398"	"HCD"	"MS2"	"7.041086"	"202.0"	"100.000"	"43.4745"	"12706"	"12706"	"12683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"339.5"	""	"273.0"	""	"272.7"	""	"385.6"	""	"319.5"	"320.4"	""	"713"	"16"	"35.000"	"28.000"	"0.910038014398735"	"19"	"0.0001686"	"0.001928"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"625.35864"	"1249.71001"	"1249.71020"	"-0.15"	"-0.00010"	"8/82"	"8"	"82"	"9137002.9263916"	"HCD"	"MS2"	"0"	"298.1"	"100.000"	"42.2351"	"12200"	"12200"	"12188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"539.8"	""	"429.7"	""	"405.5"	""	"616.5"	""	"386.4"	"434.1"	""	"711"	"24"	"35.000"	"28.000"	"0.148538695342874"	"22"	"0.0001686"	"0.00164"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"625.35864"	"1249.71001"	"1249.71020"	"-0.15"	"-0.00010"	"7/82"	"7"	"82"	"16714018.618103"	"HCD"	"MS2"	"13.69343"	"405.3"	"66.130"	"42.5293"	"12320"	"12320"	"12303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"666.6"	""	"595.7"	""	"577.8"	""	"818.5"	""	"582.3"	"586.8"	""	"711"	"13"	"35.000"	"28.000"	"1.78582790575209"	"22"	"0.0001991"	"0.003862"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"625.35870"	"1249.71013"	"1249.71020"	"-0.06"	"-0.00004"	"7/82"	"7"	"82"	"16101584.8681641"	"HCD"	"MS2"	"12.43911"	"462.9"	"80.309"	"42.6790"	"12347"	"12347"	"12330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"759.5"	""	"694.4"	""	"659.3"	""	"913.8"	""	"676.2"	"672.7"	""	"697"	"13"	"35.000"	"28.000"	"1.77501808563433"	"19"	"0.0001991"	"0.004078"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLPQEPPR"	"[K].sPLPQEPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"625.35931"	"1249.71135"	"1249.71020"	"0.92"	"0.00057"	"7/82"	"7"	"82"	"2720670.9888916"	"HCD"	"MS2"	"33.47085"	"131.4"	"100.000"	"41.9402"	"12080"	"12080"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.7"	""	"169.8"	""	"162.3"	""	"251.7"	""	"218.3"	"228.7"	""	"749"	"20"	"35.000"	"28.000"	"0.394867892698527"	"21"	"0.0001991"	"0.00386"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEDGK"	"[K].lVMEDGk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"625.36450"	"1249.72173"	"1249.72263"	"-0.72"	"-0.00045"	"10/50"	"10"	"50"	"1125845.4262085"	"HCD"	"MS2"	"18.3126"	"93.2"	"100.000"	"61.2311"	"19883"	"19883"	"19865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.3"	""	"132.3"	""	"146.5"	""	"108.9"	""	"175.2"	"178.7"	""	"795"	"23"	"35.000"	"29.000"	"0.188511189140947"	"18"	"0.002559"	"0.02608"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEDGK"	"[K].lVMEDGk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"625.36462"	"1249.72197"	"1249.72263"	"-0.53"	"-0.00033"	"10/50"	"10"	"50"	"1017456.06616211"	"HCD"	"MS2"	"20.71322"	"81.0"	"100.000"	"61.1414"	"19878"	"19878"	"19864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.0"	""	"118.8"	""	"128.6"	""	"82.7"	""	"153.0"	"152.7"	""	"795"	"25"	"35.000"	"29.000"	"0.134690552065333"	"19"	"0.001348"	"0.01105"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"417.24564"	"1249.72235"	"1249.72263"	"-0.22"	"-0.00009"	"9/54"	"9"	"54"	"4631731.12554932"	"HCD"	"MS2"	"6.636322"	"175.4"	"100.000"	"44.1438"	"12980"	"12980"	"12954"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.1"	""	"196.5"	""	"231.1"	""	"373.0"	""	"324.8"	"340.3"	""	"789"	"29"	"35.000"	"28.000"	"0.0552137198754898"	"26"	"0.002755"	"0.02925"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPSAMK"	"[K].eLPSAmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"417.24573"	"1249.72263"	"1249.72263"	"0.00"	"0.00000"	"9/54"	"9"	"54"	"3787877.46917725"	"HCD"	"MS2"	"13.82705"	"144.7"	"100.000"	"44.2763"	"12998"	"12998"	"12977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.9"	""	"164.6"	""	"189.8"	""	"288.1"	""	"284.5"	"282.1"	""	"788"	"26"	"35.000"	"28.000"	"0.092362615323605"	"24"	"0.004593"	"0.05415"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"417.25070"	"1249.73755"	"1249.74039"	"-2.27"	"-0.00095"	"5/56"	"5"	"56"	"2660483.76495361"	"HCD"	"MS2"	"38.4456"	"158.0"	"100.000"	"55.8950"	"17718"	"17718"	"17701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.8"	""	"202.4"	""	"212.2"	""	"266.7"	""	"274.3"	"345.6"	""	"670"	"26"	"35.000"	"28.000"	"0.0762157639308643"	""	"0.006697"	"0.08331"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"625.37268"	"1249.73808"	"1249.74039"	"-1.84"	"-0.00115"	"12/56"	"12"	"56"	"5842645.55841064"	"HCD"	"MS2"	"20.7739"	"449.2"	"100.000"	"55.8034"	"17681"	"17681"	"17662"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"586.0"	""	"567.9"	""	"572.7"	""	"787.9"	""	"790.4"	"958.7"	""	"695"	"37"	"35.000"	"28.000"	"0.00679132960881948"	""	"0.002462"	"0.02326"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEINSLK"	"[K].sEInSLk.[G]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q642G4"	"Peroxisomal membrane protein PEX14 OS=Rattus norvegicus OX=10116 GN=Pex14 PE=1 SV=1"	"Q642G4"	"Peroxisomal membrane protein PEX14 OS=Rattus norvegicus OX=10116 GN=Pex14 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"625.37305"	"1249.73882"	"1249.74039"	"-1.26"	"-0.00079"	"6/62"	"6"	"62"	"1343825.96691895"	"HCD"	"MS2"	"23.3185"	"118.6"	"100.000"	"49.8914"	"15275"	"15275"	"15250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"123.8"	""	"124.7"	""	"224.7"	"0.7"	"249.5"	"258.8"	""	"644"	"11"	"35.000"	"28.000"	"2.38152898568752"	"19"	"0.009382"	"0.1228"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"625.37305"	"1249.73882"	"1249.74039"	"-1.26"	"-0.00079"	"12/56"	"12"	"56"	"8101894.30456543"	"HCD"	"MS2"	"0"	"627.2"	"100.000"	"55.7629"	"17696"	"17696"	"17686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"798.4"	""	"716.2"	""	"884.6"	""	"1011.9"	""	"1153.5"	"1400.7"	""	"644"	"35"	"35.000"	"28.000"	"0.00992786519980291"	""	"0.00329"	"0.03555"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"625.37311"	"1249.73894"	"1249.74039"	"-1.16"	"-0.00072"	"12/56"	"12"	"56"	"7428284.15112305"	"HCD"	"MS2"	"5.057539"	"557.9"	"100.000"	"55.4789"	"17584"	"17584"	"17568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"724.2"	""	"692.8"	""	"750.5"	""	"964.0"	""	"985.7"	"1172.4"	""	"644"	"37"	"35.000"	"28.000"	"0.00609334645203682"	""	"0.002588"	"0.02638"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIEDSIK"	"[K].sIEDSIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3429"	"0.0000"	"1"	"1"	"1"	"625.37317"	"1249.73906"	"1249.74039"	"-1.06"	"-0.00066"	"12/56"	"12"	"56"	"9448610.54003906"	"HCD"	"MS2"	"0"	"716.9"	"100.000"	"56.0854"	"17794"	"17794"	"17782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"896.4"	""	"871.7"	""	"971.3"	""	"1129.0"	""	"1335.4"	"1602.5"	""	"645"	"35"	"35.000"	"28.000"	"0.00960571548490915"	""	"0.003001"	"0.03209"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDIDGLYR"	"[R].gLDIDGLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"625.85022"	"1250.69316"	"1250.69422"	"-0.84"	"-0.00053"	"6/68"	"6"	"68"	"366604.1015625"	"HCD"	"MS2"	"12.87196"	"20.6"	"100.000"	"96.8052"	"34271"	"34271"	"34251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"28.0"	""	"28.1"	""	"41.1"	""	"33.5"	"40.0"	""	"798"	"8"	"36.000"	"29.000"	"5.66203951153948"	"18"	"0.009514"	"0.1264"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDIDGLYR"	"[R].gLDIDGLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"625.85046"	"1250.69365"	"1250.69422"	"-0.45"	"-0.00028"	"7/68"	"7"	"68"	"421174.059997559"	"HCD"	"MS2"	"17.6502"	"24.1"	"100.000"	"96.8328"	"34313"	"34313"	"34295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.7"	""	"26.9"	""	"35.1"	""	"37.0"	""	"55.7"	"44.1"	""	"790"	"18"	"35.000"	"28.000"	"0.597856693132302"	"23"	"0.0005161"	"0.006569"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDIDGLYR"	"[R].gLDIDGLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"625.85052"	"1250.69377"	"1250.69422"	"-0.36"	"-0.00022"	"7/68"	"7"	"68"	"456841.393005371"	"HCD"	"MS2"	"17.40628"	"28.7"	"100.000"	"96.5327"	"34192"	"34192"	"34175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.0"	""	"41.7"	""	"46.4"	""	"49.3"	""	"49.9"	"47.1"	""	"790"	"33"	"35.000"	"28.000"	"0.0216569401143737"	""	"0.0001686"	"0.001456"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDIDGLYR"	"[R].gLDIDGLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"625.85052"	"1250.69377"	"1250.69422"	"-0.36"	"-0.00022"	"11/68"	"11"	"68"	"609833.419006348"	"HCD"	"MS2"	"16.812"	"33.8"	"100.000"	"96.5117"	"34152"	"34152"	"34135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.4"	""	"42.8"	""	"52.4"	""	"49.9"	""	"61.7"	"65.2"	""	"790"	"30"	"35.000"	"28.000"	"0.0426183955280782"	""	"0"	"0.0002131"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLSELQR"	"[K].eFLSELQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"625.85059"	"1250.69390"	"1250.69422"	"-0.26"	"-0.00016"	"6/66"	"6"	"66"	"392543.55645752"	"HCD"	"MS2"	"20.36013"	"24.2"	"100.000"	"88.8684"	"31066"	"31066"	"31041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.7"	""	"24.4"	""	"36.9"	""	"40.9"	"0.1"	"41.2"	"48.7"	""	"790"	"33"	"35.000"	"28.000"	"0.0220088370828112"	"25"	"0.0001991"	"0.002876"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLSELQR"	"[K].eFLSELQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"625.85059"	"1250.69390"	"1250.69422"	"-0.26"	"-0.00016"	"6/66"	"6"	"66"	"938802.091918945"	"HCD"	"MS2"	"6.26103"	"48.7"	"100.000"	"89.1570"	"31183"	"31183"	"31168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.2"	""	"55.0"	""	"68.8"	""	"83.3"	""	"90.9"	"96.7"	""	"790"	"33"	"35.000"	"28.000"	"0.0189931542637643"	"28"	"0.0001991"	"0.002034"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLSELQR"	"[K].eFLSELQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"625.85065"	"1250.69402"	"1250.69422"	"-0.16"	"-0.00010"	"6/66"	"6"	"66"	"992394.965026855"	"HCD"	"MS2"	"3.589335"	"54.2"	"100.000"	"89.0175"	"31166"	"31166"	"31156"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.8"	""	"58.6"	""	"69.2"	""	"89.0"	""	"110.8"	"102.7"	""	"788"	"28"	"35.000"	"28.000"	"0.0560397542126392"	"24"	"0.0001991"	"0.002842"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLSELQR"	"[K].eFLSELQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"B0BNF1"	"Septin-8 OS=Rattus norvegicus OX=10116 GN=Sept8 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"625.85101"	"1250.69475"	"1250.69422"	"0.43"	"0.00027"	"6/66"	"6"	"66"	"331785.022521973"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"88.7497"	"31057"	"31057"	"31036"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"32.3"	""	"23.3"	""	"38.3"	""	"52.1"	"50.7"	""	"818"	"31"	"36.000"	"29.000"	"0.0299035885144718"	"24"	"0.001316"	"0.0104"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDENIVR"	"[R].lYDENIVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FQ4"	"Cilia- and flagella-associated protein 300 OS=Rattus norvegicus OX=10116 GN=Cfap300 PE=2 SV=1"	"Q68FQ4"	"Cilia- and flagella-associated protein 300 OS=Rattus norvegicus OX=10116 GN=Cfap300 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"625.85120"	"1250.69512"	"1250.69422"	"0.72"	"0.00045"	"5/64"	"5"	"64"	"434983.716430664"	"HCD"	"MS2"	"45.66647"	"29.7"	"100.000"	"66.1393"	"21908"	"21908"	"21878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"37.9"	""	"35.8"	""	"50.4"	""	"55.1"	"60.2"	""	"817"	"11"	"36.000"	"29.000"	"3.0845517500133"	"16"	"0.004792"	"0.05679"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSQTQNK"	"[R].sSQTQNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"625.85815"	"1250.70903"	"1250.71049"	"-1.16"	"-0.00073"	"5/62"	"5"	"62"	"395841.525268555"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"19.7522"	"3185"	"3185"	"3179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.2"	""	"36.1"	""	"41.4"	""	"61.0"	""	"63.3"	"67.3"	""	"796"	"30"	"35.000"	"29.000"	"0.0442469227458073"	"28"	"0.0001991"	"0.004542"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSQTQNK"	"[R].sSQTQNk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"625.85846"	"1250.70964"	"1250.71049"	"-0.67"	"-0.00042"	"6/62"	"6"	"62"	"394924.043395996"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"19.7512"	"3224"	"3224"	"3214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.4"	""	"23.7"	""	"35.3"	""	"48.0"	""	"56.1"	"50.3"	""	"779"	"21"	"35.000"	"28.000"	"0.329236110189932"	"17"	"0.002588"	"0.02656"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYPADAGK"	"[K].aYPADAGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"625.86078"	"1250.71428"	"1250.71451"	"-0.18"	"-0.00011"	"7/56"	"7"	"56"	"1049466.39996338"	"HCD"	"MS2"	"23.52225"	"95.1"	"100.000"	"38.2177"	"10575"	"10575"	"10551"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.8"	""	"111.9"	""	"122.4"	""	"158.7"	""	"181.1"	"196.7"	""	"728"	"26"	"35.000"	"28.000"	"0.0839655976694104"	"21"	"0.00452"	"0.05261"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYPADAGK"	"[K].aYPADAGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"625.86194"	"1250.71660"	"1250.71451"	"1.67"	"0.00105"	"7/56"	"7"	"56"	"1153513.26904297"	"HCD"	"MS2"	"0"	"101.9"	"100.000"	"38.2706"	"10561"	"10561"	"10534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.6"	""	"125.0"	""	"130.6"	""	"157.9"	"0.9"	"199.6"	"202.8"	""	"671"	"26"	"35.000"	"28.000"	"0.0878400399257469"	"23"	"0.0001991"	"0.003263"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTEADK"	"[R].aASTEADk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1;Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1; Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.86261"	"1250.71794"	"1250.69925"	"14.94"	"0.00935"	"7/64"	"7"	"64"	"1059038.51672363"	"HCD"	"MS2"	"0"	"72.9"	"100.000"	"24.6832"	"5144"	"5144"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.4"	""	"78.3"	""	"95.1"	""	"119.7"	""	"159.8"	"158.5"	""	"699"	"11"	"35.000"	"28.000"	"2.78899143200158"	"13"	"0.002286"	"0.02158"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPMTSQK"	"[K].tPMTSQk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"625.86359"	"1250.71990"	"1250.71788"	"1.61"	"0.00101"	"6/58"	"6"	"58"	"1896959.13305664"	"HCD"	"MS2"	"11.90993"	"165.9"	"100.000"	"32.6718"	"8291"	"8291"	"8273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.0"	""	"194.9"	""	"210.5"	""	"227.4"	""	"347.0"	"336.9"	""	"641"	"23"	"35.000"	"28.000"	"0.17132787718673"	"19"	"0.005589"	"0.07041"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSTVEK"	"[R].tQSTVEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"625.87061"	"1250.73393"	"1250.73564"	"-1.36"	"-0.00085"	"12/68"	"12"	"68"	"693139.332946777"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"27.8440"	"6352"	"6352"	"6337"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.7"	""	"71.6"	""	"74.9"	""	"93.4"	"0.7"	"104.3"	"104.3"	""	"575"	"38"	"34.000"	"27.000"	"0.00432153315250882"	""	"0.0001991"	"0.004455"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQSTVEK"	"[R].tQSTVEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"Q63060"	"Glycerol kinase OS=Rattus norvegicus OX=10116 GN=Gk PE=2 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"625.87128"	"1250.73528"	"1250.73564"	"-0.29"	"-0.00018"	"6/68"	"6"	"68"	"590563.629882813"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"27.5929"	"6291"	"6291"	"6268"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.4"	""	"64.5"	""	"61.8"	""	"88.0"	""	"87.4"	"88.9"	""	"557"	"35"	"34.000"	"27.000"	"0.00814376437229369"	""	"0.0001991"	"0.004324"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQAFVK"	"[R].eAQAFVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.87744"	"1250.74761"	"1250.75089"	"-2.63"	"-0.00164"	"8/56"	"8"	"56"	"824028.208618164"	"HCD"	"MS2"	"75.55553"	"81.0"	"100.000"	"50.9991"	"15761"	"15761"	"15734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.8"	""	"104.0"	""	"100.1"	""	"132.6"	""	"155.4"	"178.6"	""	"453"	"6"	"33.000"	"26.000"	"5.88936141056934"	"13"	"0.002559"	"0.02591"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEEIER"	"[R].lSFEEIER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"626.34180"	"1251.67632"	"1251.67823"	"-1.53"	"-0.00096"	"6/66"	"6"	"66"	"214136.001342773"	"HCD"	"MS2"	"18.14305"	"16.5"	"100.000"	"88.0249"	"30726"	"30726"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.5"	""	"20.1"	""	"21.3"	""	"27.7"	""	"33.4"	"37.2"	""	"768"	"28"	"35.000"	"28.000"	"0.0603019316864084"	""	"0.000885"	"0.007762"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEEIER"	"[R].lSFEEIER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"626.34180"	"1251.67632"	"1251.67823"	"-1.53"	"-0.00096"	"6/66"	"6"	"66"	"305009.66607666"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"87.6918"	"30628"	"30628"	"30609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"19.0"	""	"26.3"	""	"40.2"	""	"48.1"	"58.3"	""	"768"	"32"	"35.000"	"28.000"	"0.0259018762636002"	""	"0.0001991"	"0.00367"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEEIER"	"[R].lSFEEIER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.1200"	"0.0000"	"1"	"1"	"1"	"626.34247"	"1251.67766"	"1251.67823"	"-0.46"	"-0.00029"	"6/66"	"6"	"66"	"345194.191589355"	"HCD"	"MS2"	"26.59104"	"24.1"	"100.000"	"87.7411"	"30613"	"30613"	"30588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"29.6"	""	"22.0"	""	"46.3"	"0.4"	"50.8"	"54.4"	""	"785"	"25"	"35.000"	"28.000"	"0.119080228979625"	""	"0.0003938"	"0.006329"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFEEIER"	"[R].lSFEEIER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"626.34265"	"1251.67803"	"1251.67823"	"-0.17"	"-0.00010"	"5/66"	"5"	"66"	"230400.053527832"	"HCD"	"MS2"	"42.96902"	"16.7"	"100.000"	"87.9823"	"30746"	"30746"	"30726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.3"	""	"19.2"	""	"21.3"	""	"29.2"	""	"36.3"	"38.0"	""	"785"	"9"	"35.000"	"28.000"	"4.95267307326838"	"15"	"0.00455"	"0.05402"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.36072"	"1251.71416"	"1251.71462"	"-0.37"	"-0.00023"	"6/62"	"6"	"62"	"427253.270141602"	"HCD"	"MS2"	"47.06953"	"19.1"	"100.000"	"89.9468"	"31498"	"31498"	"31475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.7"	""	"23.4"	""	"26.2"	""	"31.5"	"1.0"	"35.8"	"38.3"	""	"679"	"9"	"35.000"	"28.000"	"3.9887771990197"	"13"	"0.002035"	"0.01789"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.36108"	"1251.71489"	"1251.71462"	"0.22"	"0.00014"	"11/62"	"11"	"62"	"375037.616027832"	"HCD"	"MS2"	"43.14448"	"16.7"	"100.000"	"89.8647"	"31505"	"31505"	"31483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"21.8"	""	"23.2"	""	"25.2"	""	"33.1"	"32.9"	""	"596"	"9"	"34.000"	"27.000"	"3.6916138278605"	"13"	"0.002419"	"0.0229"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"626.36121"	"1251.71514"	"1251.71462"	"0.41"	"0.00026"	"6/62"	"6"	"62"	"1522593.746521"	"HCD"	"MS2"	"2.135413"	"70.4"	"100.000"	"89.6491"	"31379"	"31379"	"31368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.4"	""	"95.2"	""	"115.8"	""	"103.1"	""	"125.6"	"120.1"	""	"596"	"32"	"34.000"	"27.000"	"0.0178326655327975"	"19"	"0.0001991"	"0.002246"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"626.36157"	"1251.71587"	"1251.71462"	"1.00"	"0.00062"	"6/62"	"6"	"62"	"1540035.7567749"	"HCD"	"MS2"	"3.483155"	"70.0"	"100.000"	"89.5719"	"31388"	"31388"	"31373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.9"	""	"111.5"	""	"114.8"	""	"92.8"	""	"125.3"	"114.3"	""	"592"	"31"	"34.000"	"27.000"	"0.0238392018594924"	"19"	"0.0001686"	"0.001548"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"626.36261"	"1251.71794"	"1251.71462"	"2.66"	"0.00166"	"6/62"	"6"	"62"	"1045545.04327393"	"HCD"	"MS2"	"9.017229"	"54.6"	"100.000"	"89.2737"	"31268"	"31268"	"31254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.6"	""	"79.3"	""	"83.5"	""	"77.7"	""	"103.2"	"99.0"	""	"598"	"30"	"34.000"	"27.000"	"0.0283577120526968"	"15"	"0.0001991"	"0.002448"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LISEIEYR"	"[R].lISEIEYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"626.36261"	"1251.71794"	"1251.71462"	"2.66"	"0.00166"	"6/62"	"6"	"62"	"1017665.64624023"	"HCD"	"MS2"	"3.196091"	"50.8"	"100.000"	"89.3627"	"31264"	"31264"	"31251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.6"	""	"69.5"	""	"74.5"	""	"78.2"	""	"93.8"	"94.2"	""	"598"	"30"	"34.000"	"27.000"	"0.0277122117190425"	"19"	"0.0001991"	"0.001994"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEETSK"	"[K].sLEETSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"626.36322"	"1251.71916"	"1251.71965"	"-0.39"	"-0.00024"	"6/58"	"6"	"58"	"1022001.93286133"	"HCD"	"MS2"	"23.63856"	"86.3"	"100.000"	"36.0189"	"9686"	"9686"	"9665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.5"	""	"97.6"	""	"115.7"	""	"151.4"	"0.3"	"159.3"	"165.2"	""	"582"	"16"	"34.000"	"27.000"	"0.717617447135193"	"17"	"0.002588"	"0.02616"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLASK"	"[R].dYPLASk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"D3ZLZ7; E9PU28"	"Inosine-5'-monophosphate dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Impdh1 PE=3 SV=1; Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"626.36963"	"1251.73198"	"1251.73491"	"-2.34"	"-0.00146"	"12/58"	"12"	"58"	"4031951.28619385"	"HCD"	"MS2"	"48.85275"	"292.1"	"100.000"	"55.3757"	"17541"	"17541"	"17522"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.8"	""	"422.5"	""	"403.4"	""	"445.3"	""	"537.0"	"527.2"	""	"506"	"22"	"34.000"	"27.000"	"0.16185291337711"	"19"	"0.003317"	"0.03684"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYVPSK"	"[R].eAYVPSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"626.36969"	"1251.73210"	"1251.73491"	"-2.24"	"-0.00140"	"12/58"	"12"	"58"	"3381880.32995605"	"HCD"	"MS2"	"20.91768"	"235.0"	"100.000"	"48.0005"	"14506"	"14506"	"14481"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.2"	""	"352.0"	""	"294.3"	""	"350.1"	""	"434.1"	"441.8"	""	"506"	"28"	"34.000"	"27.000"	"0.0423760547634688"	"19"	"0.002525"	"0.02476"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGDPYK"	"[R].iTGDPYk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"626.37030"	"1251.73332"	"1251.73491"	"-1.27"	"-0.00079"	"6/52"	"6"	"52"	"2200430.80206299"	"HCD"	"MS2"	"24.46156"	"157.4"	"100.000"	"53.4835"	"16735"	"16735"	"16714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.9"	""	"202.4"	""	"190.4"	""	"241.6"	""	"306.5"	"317.2"	""	"498"	"34"	"33.000"	"26.000"	"0.00970955546824593"	"20"	"0.00212"	"0.01919"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITGDPYK"	"[R].iTGDPYk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"626.37036"	"1251.73345"	"1251.73491"	"-1.17"	"-0.00073"	"5/52"	"5"	"52"	"2099475.17108154"	"HCD"	"MS2"	"14.92237"	"150.0"	"100.000"	"53.1452"	"16631"	"16631"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"221.9"	""	"201.2"	""	"189.3"	""	"233.9"	""	"289.1"	"286.9"	""	"500"	"29"	"33.000"	"26.000"	"0.032880620804806"	"21"	"0.002419"	"0.02264"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEFGK"	"[R].lEAEFGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"626.37061"	"1251.73393"	"1251.73491"	"-0.78"	"-0.00049"	"6/52"	"6"	"52"	"707266.40234375"	"HCD"	"MS2"	"7.107909"	"60.0"	"100.000"	"78.3792"	"26861"	"26861"	"26839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"80.7"	""	"83.4"	""	"108.8"	""	"105.0"	"108.4"	""	"500"	"33"	"33.000"	"26.000"	"0.0137385218464406"	"23"	"0.0001991"	"0.004468"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYVPSK"	"[R].eAYVPSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"626.37061"	"1251.73393"	"1251.73491"	"-0.78"	"-0.00049"	"6/58"	"6"	"58"	"1955886.93499756"	"HCD"	"MS2"	"18.62368"	"135.5"	"100.000"	"47.6092"	"14384"	"14384"	"14363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.3"	""	"185.5"	""	"168.0"	""	"202.5"	""	"259.5"	"261.0"	""	"500"	"26"	"33.000"	"26.000"	"0.0594210071656219"	"17"	"0.004893"	"0.0605"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYVPSK"	"[R].eAYVPSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"626.37061"	"1251.73393"	"1251.73491"	"-0.78"	"-0.00049"	"6/58"	"6"	"58"	"4354492.66772461"	"HCD"	"MS2"	"0"	"299.4"	"100.000"	"48.2816"	"14621"	"14621"	"14605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"457.9"	""	"413.8"	""	"424.4"	""	"430.2"	"2.4"	"553.6"	"553.9"	""	"500"	"37"	"33.000"	"26.000"	"0.00479667185167572"	"23"	"0.001162"	"0.009234"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEFGK"	"[R].lEAEFGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"626.37079"	"1251.73430"	"1251.73491"	"-0.49"	"-0.00030"	"6/52"	"6"	"52"	"778620.640869141"	"HCD"	"MS2"	"14.09541"	"68.1"	"100.000"	"78.2895"	"26798"	"26798"	"26774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.4"	""	"75.8"	""	"98.5"	""	"124.3"	"0.2"	"124.7"	"125.3"	""	"500"	"20"	"33.000"	"26.000"	"0.223326370933324"	"17"	"0.0005778"	"0.007101"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYVPSK"	"[R].eAYVPSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"626.37079"	"1251.73430"	"1251.73491"	"-0.49"	"-0.00030"	"6/58"	"6"	"58"	"5780572.96783447"	"HCD"	"MS2"	"0"	"367.4"	"100.000"	"47.8971"	"14502"	"14502"	"14490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"582.3"	""	"516.2"	""	"515.0"	""	"541.5"	""	"644.3"	"681.9"	""	"500"	"36"	"33.000"	"26.000"	"0.00650039890791318"	"20"	"0.0009352"	"0.008146"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYVPSK"	"[R].eAYVPSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"3"	"626.37091"	"1251.73454"	"1251.73491"	"-0.29"	"-0.00018"	"12/58"	"12"	"58"	"1446812.98413086"	"HCD"	"MS2"	"0"	"121.8"	"100.000"	"48.1951"	"14623"	"14623"	"14605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.1"	""	"148.7"	""	"166.1"	""	"187.7"	""	"240.0"	"227.0"	""	"506"	"18"	"34.000"	"27.000"	"0.415069212619483"	"21"	"0.002328"	"0.02192"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEFGK"	"[R].lEAEFGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"626.37097"	"1251.73467"	"1251.73491"	"-0.19"	"-0.00012"	"6/52"	"6"	"52"	"429475.845825195"	"HCD"	"MS2"	"4.86663"	"38.4"	"100.000"	"78.5982"	"26924"	"26924"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.2"	""	"45.1"	""	"53.5"	""	"69.0"	""	"65.2"	"77.4"	""	"502"	"35"	"33.000"	"27.000"	"0.00740753515893263"	"24"	"0.0001991"	"0.003711"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEFGK"	"[R].lEAEFGk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"626.37122"	"1251.73516"	"1251.73491"	"0.20"	"0.00012"	"6/52"	"6"	"52"	"475445.658630371"	"HCD"	"MS2"	"24.79118"	"41.6"	"100.000"	"78.6996"	"26992"	"26992"	"26967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.2"	""	"55.7"	""	"51.5"	""	"74.6"	"1.1"	"67.2"	"81.9"	""	"501"	"30"	"33.000"	"26.000"	"0.0224288873770173"	"21"	"0.0001991"	"0.004843"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYVPSK"	"[R].eAYVPSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"O89046"	"Coronin-1B OS=Rattus norvegicus OX=10116 GN=Coro1b PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"417.91660"	"1251.73523"	"1251.73491"	"0.26"	"0.00011"	"7/58"	"7"	"58"	"2675298.56988525"	"HCD"	"MS2"	"16.91656"	"133.0"	"100.000"	"48.1505"	"14567"	"14567"	"14541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.2"	""	"174.9"	""	"191.6"	""	"201.2"	""	"228.3"	"252.8"	""	"501"	"21"	"33.000"	"26.000"	"0.218176379283998"	"21"	"0.004937"	"0.06114"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DAVAPAPLLR"	"[K].dAVAPAPLLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63625"	"PHD and RING finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Phrf1 PE=1 SV=2"	"Q63625"	"PHD and RING finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Phrf1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"626.38495"	"1251.76262"	"1251.76224"	"0.31"	"0.00019"	"11/72"	"11"	"72"	"426948.417297363"	"HCD"	"MS2"	"55.23454"	"35.1"	"100.000"	"69.7431"	"23368"	"23368"	"23340"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.4"	""	"42.3"	""	"42.2"	""	"59.0"	""	"71.8"	"76.2"	""	"336"	"6"	"32.000"	"25.000"	"4.1524965636271"	"13"	"0.003317"	"0.03632"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAANNYAR"	"[K].eDAANNYAR.[G]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"626.80957"	"1252.61186"	"1252.61194"	"-0.06"	"-0.00004"	"7/74"	"7"	"74"	"1054598.04040527"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"25.4586"	"5414"	"5414"	"5393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.3"	""	"57.8"	""	"73.3"	""	"103.0"	"0.1"	"134.2"	"120.6"	""	"468"	"46"	"33.000"	"26.000"	"0.000589136401095572"	""	"0"	"0.0001322"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAANNYAR"	"[K].eDAANNYAR.[G]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"626.81091"	"1252.61455"	"1252.61194"	"2.08"	"0.00130"	"7/74"	"7"	"74"	"1010117.68652344"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"25.2885"	"5384"	"5384"	"5368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.5"	""	"59.8"	""	"65.1"	""	"103.2"	"2.3"	"121.4"	"113.0"	""	"519"	"42"	"34.000"	"27.000"	"0.00183711931047684"	""	"0"	"0.0001108"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMEQFER"	"[R].aLMEQFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7T9"	"Threonine synthase-like 2 OS=Rattus norvegicus OX=10116 GN=Thnsl2 PE=2 SV=1"	"Q5M7T9"	"Threonine synthase-like 2 OS=Rattus norvegicus OX=10116 GN=Thnsl2 PE=2 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"3"	"626.83099"	"1252.65471"	"1252.65572"	"-0.81"	"-0.00051"	"6/68"	"6"	"68"	"453490.120422363"	"HCD"	"MS2"	"24.01111"	"32.7"	"100.000"	"76.4342"	"26081"	"26081"	"26058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.7"	""	"44.9"	""	"50.8"	""	"42.6"	""	"51.4"	"64.3"	""	"708"	"28"	"35.000"	"28.000"	"0.0518803935698393"	"20"	"0.0001991"	"0.002713"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMEQFER"	"[R].aLMEQFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7T9"	"Threonine synthase-like 2 OS=Rattus norvegicus OX=10116 GN=Thnsl2 PE=2 SV=1"	"Q5M7T9"	"Threonine synthase-like 2 OS=Rattus norvegicus OX=10116 GN=Thnsl2 PE=2 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"3"	"626.83112"	"1252.65495"	"1252.65572"	"-0.61"	"-0.00038"	"6/68"	"6"	"68"	"502209.382324219"	"HCD"	"MS2"	"29.35877"	"34.3"	"100.000"	"76.3733"	"26025"	"26025"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.2"	""	"51.2"	""	"42.4"	""	"42.9"	""	"64.8"	"64.6"	""	"708"	"24"	"35.000"	"28.000"	"0.145882521760455"	"15"	"0.001261"	"0.009948"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENELSLR"	"[R].yENELSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"626.83923"	"1252.67119"	"1252.67348"	"-1.83"	"-0.00115"	"6/74"	"6"	"74"	"923758.932678223"	"HCD"	"MS2"	"19.20874"	"60.4"	"100.000"	"60.6074"	"19629"	"19629"	"19602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.2"	""	"85.3"	""	"82.0"	""	"97.4"	""	"112.9"	"115.2"	""	"724"	"39"	"35.000"	"28.000"	"0.00455730999069489"	"22"	"0.0001686"	"0.001417"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"626.84003"	"1252.67278"	"1252.67348"	"-0.56"	"-0.00035"	"7/74"	"7"	"74"	"1743720.55041504"	"HCD"	"MS2"	"0"	"98.3"	"100.000"	"51.6859"	"16036"	"16036"	"16015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"89.7"	""	"80.4"	""	"165.9"	""	"240.1"	"279.2"	""	"738"	"32"	"35.000"	"28.000"	"0.0242117603265772"	"25"	"0.0001991"	"0.003188"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENELSLR"	"[R].yENELSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"626.84027"	"1252.67327"	"1252.67348"	"-0.17"	"-0.00011"	"6/74"	"6"	"74"	"2468534.27941895"	"HCD"	"MS2"	"5.633522"	"124.4"	"100.000"	"60.9274"	"19759"	"19759"	"19741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.8"	""	"163.3"	""	"166.2"	""	"202.6"	"0.7"	"220.5"	"232.1"	""	"717"	"37"	"35.000"	"28.000"	"0.00713656392026907"	"23"	"0.0001991"	"0.003793"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENELSLR"	"[R].yENELSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"626.84045"	"1252.67363"	"1252.67348"	"0.12"	"0.00007"	"6/74"	"6"	"74"	"1081287.12457275"	"HCD"	"MS2"	"11.84067"	"64.4"	"100.000"	"60.5198"	"19626"	"19626"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.0"	""	"83.8"	""	"80.1"	""	"105.7"	"2.3"	"120.7"	"114.0"	""	"741"	"43"	"35.000"	"28.000"	"0.00206913207149996"	"24"	"0.0001686"	"0.001253"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENELSLR"	"[R].yENELSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"626.84045"	"1252.67363"	"1252.67348"	"0.12"	"0.00007"	"6/74"	"6"	"74"	"2484610.32440186"	"HCD"	"MS2"	"4.384264"	"133.2"	"100.000"	"60.8167"	"19746"	"19746"	"19730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.6"	""	"179.0"	""	"178.6"	""	"194.6"	"1.1"	"252.9"	"254.6"	""	"741"	"37"	"35.000"	"28.000"	"0.00709231820220313"	"25"	"0.0001991"	"0.003911"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"626.84052"	"1252.67375"	"1252.67348"	"0.22"	"0.00014"	"5/74"	"5"	"74"	"1157777.7454834"	"HCD"	"MS2"	"20.03426"	"76.8"	"100.000"	"51.3686"	"15908"	"15908"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.3"	""	"70.6"	""	"59.7"	""	"135.4"	"2.0"	"178.1"	"211.6"	""	"741"	"32"	"35.000"	"28.000"	"0.021222092948025"	"23"	"0.0005161"	"0.006854"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYSEELR"	"[K].nIYSEELR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"626.84070"	"1252.67412"	"1252.67348"	"0.51"	"0.00032"	"5/74"	"5"	"74"	"1787953.89050293"	"HCD"	"MS2"	"0"	"96.7"	"100.000"	"51.9820"	"16122"	"16122"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.3"	""	"93.3"	""	"64.5"	""	"177.1"	""	"224.7"	"285.6"	""	"741"	"30"	"35.000"	"28.000"	"0.0331732645636125"	"26"	"0.0001991"	"0.002944"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYHFVTSR"	"[R].dYHFVTSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"418.55347"	"1253.64585"	"1253.64760"	"-1.40"	"-0.00058"	"6/68"	"6"	"68"	"1406503.28320313"	"HCD"	"MS2"	"27.48912"	"71.4"	"100.000"	"39.0813"	"10928"	"10928"	"10906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.9"	""	"93.2"	""	"97.4"	""	"124.4"	""	"139.8"	"133.1"	""	"624"	"8"	"34.000"	"27.000"	"4.75504459184754"	"15"	"0.007681"	"0.09783"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPYVFDR"	"[K].iDPYVFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"627.33875"	"1253.67021"	"1253.67275"	"-2.03"	"-0.00127"	"6/66"	"6"	"66"	"280667.143981934"	"HCD"	"MS2"	"16.43515"	"19.5"	"100.000"	"96.4494"	"34127"	"34127"	"34110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.7"	""	"23.5"	""	"33.0"	""	"29.6"	""	"31.7"	"38.0"	""	"698"	"30"	"35.000"	"28.000"	"0.032570575097815"	"20"	"0.001596"	"0.01287"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPYVFDR"	"[K].iDPYVFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"627.33960"	"1253.67192"	"1253.67275"	"-0.66"	"-0.00042"	"5/66"	"5"	"66"	"300493.546630859"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"96.4769"	"34170"	"34170"	"34155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"21.4"	""	"29.7"	""	"28.3"	""	"35.1"	"33.9"	""	"702"	"14"	"35.000"	"28.000"	"1.41353679048236"	"19"	"0.004234"	"0.04802"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPYVFDR"	"[K].iDPYVFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"627.33966"	"1253.67204"	"1253.67275"	"-0.57"	"-0.00035"	"6/66"	"6"	"66"	"418923.054199219"	"HCD"	"MS2"	"31.54473"	"24.2"	"100.000"	"96.1883"	"34054"	"34054"	"34038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"35.3"	""	"40.3"	""	"30.4"	""	"47.5"	"38.4"	""	"695"	"23"	"35.000"	"28.000"	"0.158472828293075"	"24"	"0.001718"	"0.01515"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPYVFDR"	"[K].iDPYVFDR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"P50393"	"Cytosolic phospholipase A2 OS=Rattus norvegicus OX=10116 GN=Pla2g4a PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"627.34015"	"1253.67302"	"1253.67275"	"0.21"	"0.00013"	"6/66"	"6"	"66"	"443626.09765625"	"HCD"	"MS2"	"34.84274"	"24.4"	"100.000"	"96.1563"	"34009"	"34009"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.0"	""	"34.2"	""	"39.9"	""	"33.7"	""	"43.2"	"45.6"	""	"694"	"18"	"35.000"	"28.000"	"0.525205753207365"	"23"	"0.00296"	"0.03142"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"627.34131"	"1253.67534"	"1253.67612"	"-0.63"	"-0.00039"	"6/60"	"6"	"60"	"1080472.85125732"	"HCD"	"MS2"	"20.29018"	"61.2"	"100.000"	"80.8336"	"27833"	"27833"	"27814"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.1"	""	"82.8"	""	"91.6"	""	"69.8"	"0.2"	"112.9"	"119.1"	""	"689"	"37"	"35.000"	"28.000"	"0.0068895241408848"	"18"	"0.0001686"	"0.001272"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"627.34143"	"1253.67558"	"1253.67612"	"-0.43"	"-0.00027"	"6/60"	"6"	"60"	"817701.481262207"	"HCD"	"MS2"	"24.33096"	"46.7"	"100.000"	"80.8427"	"27864"	"27864"	"27843"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.6"	""	"70.6"	""	"65.4"	""	"71.0"	""	"79.7"	"82.8"	""	"689"	"39"	"35.000"	"28.000"	"0.00394629208327987"	"20"	"0.0001686"	"0.001073"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"627.34155"	"1253.67583"	"1253.67612"	"-0.24"	"-0.00015"	"6/60"	"6"	"60"	"1537308.06225586"	"HCD"	"MS2"	"15.89847"	"83.1"	"100.000"	"81.1221"	"27977"	"27977"	"27967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.8"	""	"126.3"	""	"130.4"	""	"101.1"	"1.2"	"146.1"	"149.6"	""	"690"	"39"	"35.000"	"28.000"	"0.0045479857480196"	"24"	"9.9E-05"	"0.0009359"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMELIYAR"	"[R].eMELIYAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"627.34161"	"1253.67595"	"1253.67612"	"-0.14"	"-0.00009"	"6/60"	"6"	"60"	"1199423.66113281"	"HCD"	"MS2"	"17.03005"	"69.0"	"100.000"	"81.1336"	"27954"	"27954"	"27939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.6"	""	"92.8"	""	"113.4"	""	"74.5"	""	"124.6"	"132.9"	""	"690"	"37"	"35.000"	"28.000"	"0.00680485843959624"	"21"	"0.0001686"	"0.001554"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMEEASK"	"[K].tMEEASk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"627.34192"	"1253.67656"	"1253.68116"	"-3.67"	"-0.00230"	"6/58"	"6"	"58"	"1364649.35821533"	"HCD"	"MS2"	"23.06175"	"123.8"	"100.000"	"32.4973"	"8222"	"8222"	"8206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.6"	""	"148.8"	""	"173.7"	""	"176.5"	""	"241.7"	"255.2"	""	"677"	"17"	"35.000"	"28.000"	"0.743975566937664"	"17"	"0.003317"	"0.03605"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMEEASK"	"[K].tMEEASk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"627.34283"	"1253.67839"	"1253.68116"	"-2.21"	"-0.00138"	"6/58"	"6"	"58"	"1372151.71728516"	"HCD"	"MS2"	"0"	"123.5"	"100.000"	"32.4284"	"8230"	"8230"	"8216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.2"	""	"154.2"	""	"165.5"	""	"174.7"	""	"249.0"	"261.0"	""	"667"	"19"	"35.000"	"28.000"	"0.454041801602394"	"18"	"0.003529"	"0.0389"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETPSYAK"	"[R].eTPSYAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"Q9JLU4"	"SH3 and multiple ankyrin repeat domains protein 3 OS=Rattus norvegicus OX=10116 GN=Shank3 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"627.36011"	"1253.71294"	"1253.71417"	"-0.99"	"-0.00062"	"6/54"	"6"	"54"	"1762970.21118164"	"HCD"	"MS2"	"0"	"148.2"	"100.000"	"37.4119"	"10212"	"10212"	"10187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.1"	""	"211.9"	""	"202.5"	""	"236.6"	"0.5"	"274.2"	"272.1"	""	"522"	"22"	"34.000"	"27.000"	"0.148470614950242"	"20"	"0.002588"	"0.02639"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAAEHTLR"	"[K].vQAAEHTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"418.57635"	"1253.71451"	"1253.71635"	"-1.47"	"-0.00061"	"8/82"	"8"	"82"	"3074151.98022461"	"HCD"	"MS2"	"62.03926"	"149.4"	"100.000"	"28.5565"	"6679"	"6679"	"6667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.4"	""	"193.3"	""	"209.7"	""	"241.4"	"0.1"	"269.2"	"297.0"	""	"508"	"25"	"34.000"	"27.000"	"0.0841073048565781"	"14"	"9.9E-05"	"0.0009725"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAAEHTLR"	"[K].vQAAEHTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"418.57663"	"1253.71534"	"1253.71635"	"-0.81"	"-0.00034"	"8/82"	"8"	"82"	"3781319.66229248"	"HCD"	"MS2"	"56.58647"	"181.9"	"100.000"	"28.7825"	"6728"	"6728"	"6710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.7"	""	"233.3"	""	"239.2"	""	"285.5"	""	"371.2"	"345.2"	""	"507"	"20"	"34.000"	"27.000"	"0.273512994085261"	"17"	"0.0001686"	"0.001405"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"627.37402"	"1253.74077"	"1253.74150"	"-0.58"	"-0.00037"	"7/76"	"7"	"76"	"1063665.13513184"	"HCD"	"MS2"	"25.04908"	"56.6"	"100.000"	"54.7851"	"17300"	"17300"	"17275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"71.9"	""	"74.4"	""	"91.3"	""	"106.7"	"105.9"	""	"431"	"39"	"33.000"	"26.000"	"0.00259087985660052"	"18"	"0"	"0.000362"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"418.58511"	"1253.74079"	"1253.74150"	"-0.57"	"-0.00024"	"12/76"	"12"	"76"	"488021.176605225"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"55.4979"	"17557"	"17557"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.8"	""	"19.9"	""	"23.1"	""	"23.6"	"0.9"	"34.4"	"35.0"	""	"431"	"49"	"33.000"	"26.000"	"0.000255533165230023"	"25"	"0.0001686"	"0.00134"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"627.37408"	"1253.74089"	"1253.74150"	"-0.49"	"-0.00031"	"7/76"	"7"	"76"	"1713082.96081543"	"HCD"	"MS2"	"0"	"73.8"	"100.000"	"55.2150"	"17441"	"17441"	"17418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.2"	""	"94.6"	""	"106.1"	""	"121.4"	"1.4"	"134.6"	"136.8"	""	"431"	"40"	"33.000"	"26.000"	"0.00220012458739005"	"22"	"0"	"3.66E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"627.37415"	"1253.74101"	"1253.74150"	"-0.39"	"-0.00024"	"7/76"	"7"	"76"	"4560022.90917969"	"HCD"	"MS2"	"9.240227"	"176.6"	"100.000"	"55.5117"	"17562"	"17562"	"17544"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"248.0"	""	"273.2"	""	"279.9"	""	"269.4"	""	"301.1"	"310.2"	""	"431"	"40"	"33.000"	"26.000"	"0.00213524284124391"	"18"	"0"	"6.511E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPEGSVIPR"	"[K].aVPEGSVIPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"627.37433"	"1253.74138"	"1253.74150"	"-0.10"	"-0.00006"	"7/76"	"7"	"76"	"4856213.69830322"	"HCD"	"MS2"	"5.427999"	"174.2"	"100.000"	"55.1023"	"17429"	"17429"	"17410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.8"	""	"239.8"	""	"268.9"	""	"279.1"	"3.4"	"296.7"	"301.9"	""	"411"	"39"	"33.000"	"26.000"	"0.00279776882246753"	"18"	"0"	"7.171E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMADAMK"	"[K].nMADAmk.[K]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"627.83252"	"1254.65776"	"1254.65865"	"-0.71"	"-0.00044"	"5/60"	"5"	"60"	"370132.733337402"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"33.0919"	"8500"	"8500"	"8478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"51.1"	""	"53.6"	""	"49.1"	""	"64.5"	"71.2"	""	"633"	"23"	"35.000"	"28.000"	"0.17473250953236"	"21"	"0.009781"	"0.1301"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQLFDR"	"[K].eAFQLFDR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119; P16409"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3; Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"627.83752"	"1254.66777"	"1254.66800"	"-0.18"	"-0.00012"	"6/76"	"6"	"76"	"846643.436523438"	"HCD"	"MS2"	"21.54612"	"47.0"	"100.000"	"98.5039"	"34958"	"34958"	"34943"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.0"	""	"61.2"	""	"55.5"	""	"105.7"	"0.5"	"86.1"	"81.7"	""	"594"	"15"	"34.000"	"27.000"	"0.872481946632575"	"19"	"0.002166"	"0.02001"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQLFDR"	"[K].eAFQLFDR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119; P16409"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3; Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"627.83759"	"1254.66789"	"1254.66800"	"-0.09"	"-0.00005"	"5/76"	"5"	"76"	"583801.222290039"	"HCD"	"MS2"	"21.10128"	"32.9"	"100.000"	"98.5064"	"34989"	"34989"	"34967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.4"	""	"38.3"	""	"45.4"	""	"63.4"	"2.9"	"56.5"	"62.9"	""	"592"	"8"	"34.000"	"27.000"	"4.9237014450957"	"18"	"0.009411"	"0.124"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQLFDR"	"[K].eAFQLFDR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119; P16409"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3; Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"627.83759"	"1254.66789"	"1254.66800"	"-0.09"	"-0.00005"	"6/76"	"6"	"76"	"5597073.50042725"	"HCD"	"MS2"	"0.6508766"	"270.0"	"100.000"	"98.8015"	"35079"	"35079"	"35063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"341.8"	""	"290.2"	""	"325.7"	""	"628.7"	""	"468.8"	"507.4"	""	"592"	"31"	"34.000"	"27.000"	"0.0210035019317163"	""	"0.0001991"	"0.001971"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFQLFDR"	"[K].eAFQLFDR.[T]"	"N-Term(TMT6plex)"	"1"	"2"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119; P16409"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3; Myosin light chain 3 OS=Rattus norvegicus OX=10116 GN=Myl3 PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"627.83771"	"1254.66814"	"1254.66800"	"0.11"	"0.00007"	"6/76"	"6"	"76"	"5918426.57403564"	"HCD"	"MS2"	"0.4389963"	"272.7"	"100.000"	"98.8066"	"35111"	"35111"	"35094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"359.6"	""	"293.0"	""	"319.3"	""	"629.2"	"2.0"	"475.1"	"505.7"	""	"599"	"32"	"34.000"	"27.000"	"0.0212029762423049"	""	"0.0001991"	"0.003314"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNSGDYK"	"[K].lNSGDYk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"627.85968"	"1254.71208"	"1254.70942"	"2.12"	"0.00133"	"6/62"	"6"	"62"	"1014222.16680908"	"HCD"	"MS2"	"37.03024"	"101.3"	"100.000"	"45.3179"	"13422"	"13422"	"13394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.7"	""	"117.8"	""	"113.3"	""	"163.6"	""	"219.3"	"197.2"	""	"513"	"15"	"34.000"	"27.000"	"0.756985166639927"	"22"	"0.002559"	"0.02597"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPELTPAER"	"[R].lPELTPAER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P43424"	"Galactose-1-phosphate uridylyltransferase OS=Rattus norvegicus OX=10116 GN=Galt PE=2 SV=1"	"P43424"	"Galactose-1-phosphate uridylyltransferase OS=Rattus norvegicus OX=10116 GN=Galt PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"627.86664"	"1254.72600"	"1254.72552"	"0.38"	"0.00024"	"10/74"	"10"	"74"	"1061994.02001953"	"HCD"	"MS2"	"42.8125"	"54.1"	"100.000"	"72.9289"	"24655"	"24655"	"24632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.9"	""	"66.5"	""	"68.3"	""	"88.7"	"1.6"	"107.3"	"118.5"	""	"430"	"20"	"33.000"	"26.000"	"0.233581509077669"	"21"	"0.0005161"	"0.006632"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNAGGHK"	"[K].nVNAGGHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"627.86890"	"1254.73052"	"1254.73189"	"-1.09"	"-0.00069"	"10/72"	"10"	"72"	"561560.680175781"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"20.5556"	"3533"	"3533"	"3511"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"63.2"	""	"68.1"	""	"55.5"	"1.4"	"89.7"	"99.2"	""	"396"	"25"	"32.000"	"25.000"	"0.060906716931866"	"20"	"0.0001686"	"0.001305"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNAGGHK"	"[K].nVNAGGHk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.87048"	"1254.73369"	"1254.73189"	"1.43"	"0.00090"	"5/72"	"5"	"72"	"335974.526184082"	"HCD"	"MS2"	"19.89555"	"26.7"	"100.000"	"20.6115"	"3518"	"3518"	"3493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"31.3"	""	"35.9"	""	"46.1"	""	"52.1"	"60.1"	""	"384"	"10"	"32.000"	"25.000"	"1.82516120382006"	"13"	"0.000885"	"0.007745"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILNGHTLTR"	"[R].iLnGHTLTR.[R]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"418.91669"	"1254.73551"	"1254.73675"	"-0.99"	"-0.00041"	"6/80"	"6"	"80"	"798928.582519531"	"HCD"	"MS2"	"24.72094"	"46.5"	"100.000"	"47.1722"	"14207"	"14207"	"14177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.1"	""	"51.9"	""	"49.6"	""	"85.8"	"0.1"	"97.1"	"109.5"	""	"375"	"14"	"32.000"	"25.000"	"0.69502635334233"	"18"	"0.006845"	"0.08539"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVQQPGER"	"[R].vIVQQPGER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.87158"	"1254.73589"	"1254.73675"	"-0.69"	"-0.00043"	"5/74"	"5"	"74"	"852427.04486084"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"39.3372"	"10995"	"10995"	"10982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.9"	""	"99.6"	""	"92.7"	""	"75.0"	""	"100.2"	"100.8"	""	"376"	"29"	"32.000"	"25.000"	"0.0232358117487568"	"14"	"0.001348"	"0.01099"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIVQQPGER"	"[R].vIVQQPGER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.87244"	"1254.73760"	"1254.73675"	"0.67"	"0.00042"	"5/74"	"5"	"74"	"1314222.06591797"	"HCD"	"MS2"	"0"	"70.7"	"100.000"	"39.3286"	"11027"	"11027"	"11002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"116.6"	""	"101.3"	""	"96.7"	"0.1"	"114.9"	"130.6"	""	"374"	"21"	"32.000"	"25.000"	"0.146164399458018"	"14"	"0.0005161"	"0.006665"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"627.88422"	"1254.76116"	"1254.76190"	"-0.60"	"-0.00037"	"9/76"	"9"	"76"	"461824.991821289"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"109.5374"	"39338"	"39338"	"39330"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"26.2"	""	"23.0"	""	"34.7"	""	"37.6"	"37.2"	""	"316"	"22"	"31.000"	"24.000"	"0.092396833294828"	"22"	"0.0001686"	"0.001775"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"627.88422"	"1254.76116"	"1254.76190"	"-0.60"	"-0.00037"	"11/76"	"11"	"76"	"460008.622192383"	"HCD"	"MS2"	"31.22488"	"20.0"	"100.000"	"107.6762"	"38652"	"38652"	"38645"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"26.0"	""	"26.8"	""	"35.9"	""	"37.4"	"40.1"	""	"316"	"20"	"31.000"	"24.000"	"0.147115044323917"	"22"	"0.0001686"	"0.001054"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"627.88422"	"1254.76116"	"1254.76190"	"-0.60"	"-0.00037"	"11/76"	"11"	"76"	"1126420.68994141"	"HCD"	"MS2"	"26.40283"	"46.0"	"100.000"	"106.5888"	"38208"	"38208"	"38190"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.8"	""	"63.2"	""	"63.1"	""	"79.0"	""	"83.5"	"86.9"	""	"316"	"30"	"31.000"	"24.000"	"0.0172845105870991"	"21"	"9.9E-05"	"0.0006196"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"627.88434"	"1254.76140"	"1254.76190"	"-0.40"	"-0.00025"	"12/76"	"12"	"76"	"2648270.0904541"	"HCD"	"MS2"	"0.3913296"	"94.9"	"100.000"	"107.1443"	"38429"	"38429"	"38419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.5"	""	"140.8"	""	"141.3"	""	"145.0"	""	"164.7"	"178.9"	""	"316"	"32"	"31.000"	"24.000"	"0.00992332206925042"	"24"	"0"	"0.0001625"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"627.88440"	"1254.76152"	"1254.76190"	"-0.30"	"-0.00019"	"5/76"	"5"	"76"	"3238229.54107666"	"HCD"	"MS2"	"0"	"117.5"	"100.000"	"107.4045"	"38550"	"38550"	"38539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.0"	""	"169.7"	""	"167.3"	""	"176.0"	"0.2"	"208.2"	"218.0"	""	"316"	"32"	"31.000"	"24.000"	"0.00971979458881592"	"24"	"0"	"0.0002238"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"627.88452"	"1254.76177"	"1254.76190"	"-0.11"	"-0.00007"	"5/76"	"5"	"76"	"439890.861938477"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"109.2935"	"39232"	"39232"	"39221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"23.2"	""	"30.2"	""	"33.6"	""	"37.3"	"37.3"	""	"316"	"35"	"31.000"	"24.000"	"0.00448391206493766"	"23"	"0.0001991"	"0.005517"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"627.88452"	"1254.76177"	"1254.76190"	"-0.11"	"-0.00007"	"12/76"	"12"	"76"	"705829.475769043"	"HCD"	"MS2"	"40.25156"	"29.4"	"100.000"	"106.8464"	"38329"	"38329"	"38314"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"41.4"	""	"34.0"	""	"53.8"	""	"50.9"	"57.7"	""	"316"	"23"	"31.000"	"24.000"	"0.07288817678054"	"22"	"0"	"0.0001209"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"627.88544"	"1254.76360"	"1254.76190"	"1.35"	"0.00085"	"11/76"	"11"	"76"	"16122316.5958252"	"HCD"	"MS2"	"0.1406722"	"377.7"	"67.688"	"107.1173"	"38437"	"38437"	"38424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"572.9"	""	"519.8"	""	"553.7"	""	"619.8"	""	"629.8"	"684.3"	""	"288"	"36"	"31.000"	"24.000"	"0.00337568949406069"	"24"	"9.9E-05"	"0.0004268"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLIPLEIR"	"[K].dGLIPLEIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"627.88593"	"1254.76457"	"1254.76190"	"2.13"	"0.00134"	"12/76"	"12"	"76"	"16570685.897522"	"HCD"	"MS2"	"0"	"437.1"	"79.484"	"106.8687"	"38321"	"38321"	"38306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"663.4"	""	"589.2"	""	"629.0"	""	"715.4"	""	"751.7"	"797.5"	""	"289"	"33"	"31.000"	"24.000"	"0.00753126357546841"	"24"	"9.9E-05"	"0.0005698"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"628.33478"	"1255.66228"	"1255.66325"	"-0.77"	"-0.00049"	"7/68"	"7"	"68"	"1948735.4029541"	"HCD"	"MS2"	"0"	"107.4"	"100.000"	"53.1703"	"16607"	"16607"	"16586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.8"	""	"133.6"	""	"164.4"	""	"165.9"	"1.4"	"189.8"	"188.3"	""	"527"	"41"	"34.000"	"27.000"	"0.00230027955570267"	"22"	"0"	"0.0001251"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"628.33502"	"1255.66277"	"1255.66325"	"-0.39"	"-0.00024"	"7/68"	"7"	"68"	"2255041.22625732"	"HCD"	"MS2"	"0"	"121.3"	"100.000"	"52.8252"	"16500"	"16500"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.1"	""	"153.4"	""	"176.2"	""	"204.8"	"1.3"	"215.8"	"209.8"	""	"518"	"38"	"34.000"	"27.000"	"0.00460574367200081"	"20"	"0"	"0.000173"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"628.33551"	"1255.66374"	"1255.66325"	"0.39"	"0.00025"	"7/68"	"7"	"68"	"697112.315795898"	"HCD"	"MS2"	"11.38429"	"46.5"	"100.000"	"52.8711"	"16485"	"16485"	"16464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.5"	""	"58.8"	""	"63.8"	""	"81.6"	""	"84.1"	"84.9"	""	"543"	"32"	"34.000"	"27.000"	"0.0162843277203371"	"22"	"0.0001686"	"0.001324"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFAAGYNVR"	"[K].eFAAGYNVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"P36970"	"Phospholipid hydroperoxide glutathione peroxidase OS=Rattus norvegicus OX=10116 GN=Gpx4 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"628.33649"	"1255.66570"	"1255.66325"	"1.95"	"0.00122"	"7/68"	"7"	"68"	"674950.874389648"	"HCD"	"MS2"	"0"	"49.5"	"100.000"	"52.5352"	"16382"	"16382"	"16356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.5"	""	"65.4"	""	"66.1"	""	"69.7"	"0.3"	"99.7"	"91.7"	""	"540"	"40"	"34.000"	"27.000"	"0.0029673157664678"	"22"	"9.9E-05"	"0.0006996"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIMMDGK"	"[R].sImMDGk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"3"	"628.34296"	"1255.67864"	"1255.67905"	"-0.33"	"-0.00021"	"6/56"	"6"	"56"	"1011228.82873535"	"HCD"	"MS2"	"51.0392"	"84.6"	"100.000"	"48.4633"	"14731"	"14731"	"14702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.3"	""	"97.7"	""	"132.7"	""	"112.5"	"0.8"	"169.1"	"175.7"	""	"566"	"12"	"34.000"	"27.000"	"1.81044958441589"	"13"	"0.009444"	"0.1254"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].LVFDEYLk.[T]"	"K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"628.35962"	"1255.71196"	"1255.71356"	"-1.27"	"-0.00080"	"6/58"	"6"	"58"	"377723.705688477"	"HCD"	"MS2"	"31.00216"	"19.9"	"100.000"	"101.6277"	"36224"	"36224"	"36207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.6"	""	"26.6"	""	"36.9"	""	"28.8"	"0.9"	"33.6"	"34.5"	""	"531"	"40"	"34.000"	"27.000"	"0.00257670396303677"	"23"	"0.006237"	"0.07639"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVFDEYLK"	"[R].LVFDEYLk.[T]"	"K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"628.36005"	"1255.71282"	"1255.71356"	"-0.59"	"-0.00037"	"6/58"	"6"	"58"	"461438.927307129"	"HCD"	"MS2"	"40.13319"	"22.0"	"100.000"	"101.8670"	"36347"	"36347"	"36323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.1"	""	"37.1"	""	"39.7"	""	"26.5"	""	"37.6"	"38.4"	""	"531"	"40"	"34.000"	"27.000"	"0.00239367137034381"	"23"	"0.006577"	"0.08215"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVVAPDADAR"	"[K].lVVAPDADAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJM8"	"Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2"	"Q5BJM8"	"Zinc transporter 7 OS=Rattus norvegicus OX=10116 GN=Slc30a7 PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"628.36353"	"1255.71977"	"1255.72077"	"-0.79"	"-0.00050"	"6/76"	"6"	"76"	"563805.695068359"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"56.3922"	"17915"	"17915"	"17891"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.8"	""	"36.4"	""	"43.9"	""	"56.2"	""	"71.9"	"63.9"	""	"491"	"30"	"33.000"	"26.000"	"0.0222869940158745"	"23"	"0.0001991"	"0.004483"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"628.36353"	"1255.71977"	"1255.72077"	"-0.79"	"-0.00050"	"6/76"	"6"	"76"	"2231707.67578125"	"HCD"	"MS2"	"4.301068"	"93.3"	"100.000"	"68.3790"	"22812"	"22812"	"22794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.8"	""	"130.6"	""	"117.0"	""	"158.6"	""	"191.8"	"192.7"	""	"491"	"35"	"33.000"	"26.000"	"0.00847327880069528"	"24"	"0"	"4.02E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"628.36365"	"1255.72002"	"1255.72077"	"-0.60"	"-0.00037"	"6/76"	"6"	"76"	"656467.706787109"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"68.6996"	"22943"	"22943"	"22922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.0"	""	"53.3"	""	"48.1"	""	"61.6"	"1.4"	"86.2"	"78.0"	""	"494"	"27"	"33.000"	"26.000"	"0.0507804977208083"	"20"	"0"	"0.0001853"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"628.36407"	"1255.72087"	"1255.72077"	"0.08"	"0.00005"	"6/76"	"6"	"76"	"2396293.18713379"	"HCD"	"MS2"	"1.665472"	"102.4"	"100.000"	"68.4290"	"22800"	"22800"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.4"	""	"121.8"	""	"117.0"	""	"179.4"	""	"216.8"	"221.4"	""	"466"	"36"	"33.000"	"26.000"	"0.00587971019987974"	"20"	"0"	"0.0001163"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDADGPLAR"	"[R].lVDADGPLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"Q10743"	"Disintegrin and metalloproteinase domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Adam10 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"628.36444"	"1255.72161"	"1255.72077"	"0.67"	"0.00042"	"6/76"	"6"	"76"	"444391.442871094"	"HCD"	"MS2"	"14.15336"	"30.9"	"100.000"	"68.7051"	"22912"	"22912"	"22899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"41.6"	""	"44.0"	""	"50.5"	""	"58.0"	"61.0"	""	"464"	"35"	"33.000"	"26.000"	"0.00725250413172758"	"18"	"0"	"7.057E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"628.38177"	"1255.75627"	"1255.75715"	"-0.70"	"-0.00044"	"7/74"	"7"	"74"	"6720180.86346436"	"HCD"	"MS2"	"0.9386227"	"241.2"	"100.000"	"86.2922"	"30034"	"30034"	"30019"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.7"	"2.7"	"336.7"	""	"337.1"	""	"413.7"	"1.6"	"429.9"	"477.1"	""	"343"	"34"	"32.000"	"25.000"	"0.00619817914426937"	"16"	"0"	"7.423E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"628.38184"	"1255.75640"	"1255.75715"	"-0.60"	"-0.00038"	"7/74"	"7"	"74"	"3549906.83361816"	"HCD"	"MS2"	"7.327949"	"135.2"	"100.000"	"86.5737"	"30145"	"30145"	"30134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.7"	""	"192.1"	""	"192.2"	""	"227.9"	""	"253.7"	"257.1"	""	"344"	"34"	"32.000"	"25.000"	"0.00725317985897161"	"16"	"0"	"5.627E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"628.38196"	"1255.75664"	"1255.75715"	"-0.41"	"-0.00026"	"6/74"	"6"	"74"	"1276845.0680542"	"HCD"	"MS2"	"7.162969"	"53.9"	"100.000"	"85.9926"	"29915"	"29915"	"29900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.3"	""	"74.1"	""	"77.4"	""	"92.3"	""	"97.2"	"101.6"	""	"344"	"34"	"32.000"	"25.000"	"0.00733716772338738"	"18"	"0"	"0.0002475"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"628.38208"	"1255.75688"	"1255.75715"	"-0.21"	"-0.00013"	"9/74"	"9"	"74"	"1317056.42199707"	"HCD"	"MS2"	"8.136915"	"56.6"	"100.000"	"85.9757"	"29938"	"29938"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.5"	""	"62.7"	""	"88.3"	""	"103.7"	""	"99.4"	"112.0"	""	"344"	"37"	"32.000"	"25.000"	"0.00342395814305796"	"16"	"0"	"0.0001605"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"628.38208"	"1255.75688"	"1255.75715"	"-0.21"	"-0.00013"	"7/74"	"7"	"74"	"3093478.02813721"	"HCD"	"MS2"	"5.784978"	"130.3"	"100.000"	"86.5775"	"30179"	"30179"	"30164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.8"	""	"188.9"	""	"177.4"	""	"221.3"	""	"239.9"	"256.8"	""	"344"	"35"	"32.000"	"25.000"	"0.00586851807989716"	"16"	"0"	"3.198E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSLVPIGR"	"[K].aVDSLVPIGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"628.38220"	"1255.75713"	"1255.75715"	"-0.02"	"-0.00001"	"7/74"	"7"	"74"	"6946158.36804199"	"HCD"	"MS2"	"0.98174"	"251.2"	"100.000"	"86.2777"	"30060"	"30060"	"30043"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.6"	""	"364.1"	""	"361.8"	""	"408.0"	""	"460.5"	"485.2"	""	"308"	"35"	"31.000"	"24.000"	"0.00444140851481498"	"16"	"0"	"6.729E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVPEDK"	"[K].iPVPEDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"P31399"	"ATP synthase subunit d, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5pd PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"628.38617"	"1255.76506"	"1255.76621"	"-0.91"	"-0.00057"	"6/50"	"6"	"50"	"1031525.15942383"	"HCD"	"MS2"	"31.05286"	"55.7"	"100.000"	"67.8195"	"22584"	"22584"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	""	"58.0"	""	"75.7"	""	"94.2"	""	"127.7"	"116.8"	""	"309"	"22"	"31.000"	"24.000"	"0.0895217335979531"	""	"0.007752"	"0.09921"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSAYDSK"	"[K].qSAYDSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"628.84650"	"1256.68572"	"1256.68869"	"-2.36"	"-0.00149"	"12/68"	"12"	"68"	"675422.291503906"	"HCD"	"MS2"	"0"	"69.4"	"100.000"	"29.1614"	"6883"	"6883"	"6859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.2"	""	"78.8"	""	"70.8"	""	"110.1"	""	"150.7"	"151.4"	""	"604"	"25"	"34.000"	"27.000"	"0.103040259309822"	"20"	"0.001261"	"0.009592"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSAYDSK"	"[K].qSAYDSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"628.84814"	"1256.68901"	"1256.68869"	"0.26"	"0.00016"	"6/68"	"6"	"68"	"721130.543884277"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"29.0091"	"6862"	"6862"	"6841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.9"	""	"78.3"	""	"69.0"	""	"112.9"	""	"131.8"	"148.0"	""	"588"	"26"	"34.000"	"27.000"	"0.070525687819173"	"21"	"0.0005161"	"0.006874"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLAAQLER"	"[K].qVLAAQLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"628.87891"	"1256.75054"	"1256.75240"	"-1.48"	"-0.00093"	"6/80"	"6"	"80"	"825991.023376465"	"HCD"	"MS2"	"21.17152"	"47.7"	"100.000"	"56.1318"	"17844"	"17844"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"51.8"	""	"67.5"	""	"81.4"	""	"98.6"	"88.7"	""	"438"	"37"	"33.000"	"26.000"	"0.00408737152292793"	"20"	"0.0001686"	"0.001263"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLAAQLER"	"[K].qVLAAQLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"628.88013"	"1256.75298"	"1256.75240"	"0.46"	"0.00029"	"7/80"	"7"	"80"	"831696.540466309"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"56.4449"	"17936"	"17936"	"17919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"53.8"	""	"58.2"	""	"77.5"	"0.1"	"101.8"	"98.8"	""	"434"	"34"	"33.000"	"26.000"	"0.00780656057287962"	"25"	"0"	"0.0001259"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALQPK"	"[K].eLALQPk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"628.90186"	"1256.79643"	"1256.79784"	"-1.12"	"-0.00070"	"5/52"	"5"	"52"	"550686.886474609"	"HCD"	"MS2"	"27.81474"	"41.1"	"100.000"	"63.5074"	"20837"	"20837"	"20814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.4"	""	"50.0"	""	"58.0"	""	"60.8"	"0.5"	"73.9"	"80.6"	""	"288"	"16"	"31.000"	"24.000"	"0.381384019959365"	"24"	"0.001615"	"0.01386"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"629.31903"	"1257.63078"	"1257.63128"	"-0.40"	"-0.00025"	"12/64"	"12"	"64"	"1312921.0916748"	"HCD"	"MS2"	"52.24851"	"57.2"	"100.000"	"82.5982"	"28544"	"28544"	"28523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.8"	""	"68.3"	""	"69.2"	""	"97.3"	"0.0"	"107.7"	"109.9"	""	"424"	"17"	"33.000"	"26.000"	"0.458496327030129"	"15"	"0.0001991"	"0.00575"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.31903"	"1257.63078"	"1257.63128"	"-0.40"	"-0.00025"	"10/64"	"10"	"64"	"1705275.6362915"	"HCD"	"MS2"	"30.82657"	"69.4"	"100.000"	"82.9705"	"28723"	"28723"	"28704"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.0"	""	"75.9"	""	"96.6"	""	"117.5"	""	"146.0"	"129.5"	""	"424"	"15"	"33.000"	"26.000"	"0.684440753803079"	"13"	"0.001261"	"0.01002"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"629.31909"	"1257.63091"	"1257.63128"	"-0.30"	"-0.00019"	"10/64"	"10"	"64"	"1742737.37432861"	"HCD"	"MS2"	"36.52339"	"71.6"	"100.000"	"82.8926"	"28663"	"28663"	"28645"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.3"	""	"82.3"	""	"85.0"	""	"115.1"	"1.6"	"149.1"	"144.6"	""	"422"	"20"	"33.000"	"26.000"	"0.226611766004003"	"17"	"0.0001991"	"0.004993"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVEEYFR"	"[K].gEVEEYFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"629.31927"	"1257.63127"	"1257.63128"	"-0.01"	"-0.00001"	"5/62"	"5"	"62"	"827665.202697754"	"HCD"	"MS2"	"49.32255"	"54.3"	"100.000"	"69.2641"	"23173"	"23173"	"23152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.1"	""	"73.4"	""	"68.2"	""	"83.3"	"0.4"	"108.0"	"112.0"	""	"424"	"14"	"33.000"	"26.000"	"0.824775707387875"	"22"	"0.0001991"	"0.00464"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVEEYFR"	"[K].gEVEEYFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"P86172"	"NmrA-like family domain-containing protein 1 (Fragments) OS=Rattus norvegicus OX=10116 GN=Nmral1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"629.31927"	"1257.63127"	"1257.63128"	"-0.01"	"-0.00001"	"5/62"	"5"	"62"	"747238.073730469"	"HCD"	"MS2"	"49.10724"	"47.9"	"100.000"	"69.2395"	"23129"	"23129"	"23108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"59.4"	""	"68.6"	""	"77.0"	""	"87.6"	"100.0"	""	"424"	"15"	"33.000"	"26.000"	"0.698772589816211"	"16"	"0.0001991"	"0.00575"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTDFDEVR"	"[K].fTDFDEVR.[QH]"	"N-Term(TMT6plex)"	"2"	"2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"629.31940"	"1257.63152"	"1257.63128"	"0.19"	"0.00012"	"11/64"	"11"	"64"	"1292823.36859131"	"HCD"	"MS2"	"50.26612"	"56.0"	"100.000"	"82.6414"	"28590"	"28590"	"28569"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.0"	""	"70.1"	""	"69.6"	""	"90.3"	"0.6"	"111.6"	"101.5"	""	"426"	"22"	"33.000"	"26.000"	"0.136892483788525"	"15"	"0.0001686"	"0.00194"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTLEFSR"	"[K].eFTLEFSR.[D]"	"N-Term(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.33716"	"1257.66704"	"1257.66767"	"-0.50"	"-0.00031"	"6/68"	"6"	"68"	"854085.602233887"	"HCD"	"MS2"	"37.5792"	"33.0"	"100.000"	"97.6708"	"34652"	"34652"	"34631"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.0"	""	"33.6"	""	"44.7"	""	"49.8"	""	"53.6"	"97.0"	""	"567"	"13"	"34.000"	"27.000"	"1.56513954036095"	"13"	"0.002525"	"0.02489"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTLEFSR"	"[K].eFTLEFSR.[D]"	"N-Term(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"629.33771"	"1257.66814"	"1257.66767"	"0.37"	"0.00023"	"6/68"	"6"	"68"	"1202296.48803711"	"HCD"	"MS2"	"32.32363"	"45.4"	"100.000"	"97.5850"	"34586"	"34586"	"34567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"47.4"	""	"48.8"	""	"64.7"	""	"91.2"	"134.8"	""	"556"	"19"	"34.000"	"27.000"	"0.349981264478778"	"15"	"0.0001991"	"0.004543"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTLEFSR"	"[K].eFTLEFSR.[D]"	"N-Term(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.33789"	"1257.66850"	"1257.66767"	"0.66"	"0.00042"	"6/68"	"6"	"68"	"690937.274047852"	"HCD"	"MS2"	"43.26062"	"32.9"	"100.000"	"97.3590"	"34526"	"34526"	"34504"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"30.8"	""	"37.5"	""	"57.3"	""	"60.6"	"89.8"	""	"550"	"12"	"34.000"	"27.000"	"1.57882027107015"	"13"	"0.002525"	"0.02374"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTLEFSR"	"[K].eFTLEFSR.[D]"	"N-Term(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.33911"	"1257.67095"	"1257.66767"	"2.61"	"0.00164"	"4/68"	"4"	"68"	"437252.363952637"	"HCD"	"MS2"	"44.32098"	"23.6"	"100.000"	"97.2619"	"34456"	"34456"	"34434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"24.5"	""	"27.0"	""	"37.0"	""	"40.0"	"71.2"	""	"562"	"13"	"34.000"	"27.000"	"1.42464389025192"	"13"	"0.003208"	"0.03473"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"629.34302"	"1257.67876"	"1257.67890"	"-0.11"	"-0.00007"	"6/66"	"6"	"66"	"4405721.69940186"	"HCD"	"MS2"	"3.969172"	"193.0"	"100.000"	"62.0875"	"20226"	"20226"	"20215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"333.0"	""	"248.8"	""	"272.0"	""	"253.2"	"1.0"	"357.3"	"362.2"	""	"579"	"32"	"34.000"	"27.000"	"0.019482674199431"	"21"	"0.0005161"	"0.006909"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"629.34320"	"1257.67912"	"1257.67890"	"0.18"	"0.00011"	"7/66"	"7"	"66"	"3731649.53881836"	"HCD"	"MS2"	"4.150935"	"164.1"	"100.000"	"62.0769"	"20256"	"20256"	"20239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"271.7"	""	"227.4"	""	"238.7"	""	"218.5"	""	"291.7"	"305.9"	""	"592"	"29"	"34.000"	"27.000"	"0.0364999030635757"	"22"	"0.0009352"	"0.007833"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APIQWEER"	"[K].aPIQWEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"629.34418"	"1257.68108"	"1257.67890"	"1.73"	"0.00109"	"6/66"	"6"	"66"	"3116813.73629761"	"HCD"	"MS2"	"13.29998"	"164.5"	"100.000"	"61.7497"	"20123"	"20123"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.6"	""	"230.9"	""	"232.3"	""	"209.2"	""	"285.7"	"307.1"	""	"597"	"29"	"34.000"	"27.000"	"0.0359703228200981"	"18"	"0.001049"	"0.008498"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILQEIQR"	"[R].eILQEIQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"629.37262"	"1257.73796"	"1257.73642"	"1.23"	"0.00077"	"6/72"	"6"	"72"	"472302.58984375"	"HCD"	"MS2"	"11.43885"	"29.6"	"100.000"	"73.8853"	"25045"	"25045"	"25021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.5"	""	"32.1"	""	"32.6"	""	"55.3"	"0.2"	"62.4"	"59.9"	""	"546"	"25"	"34.000"	"27.000"	"0.0895700150198815"	"22"	"0.002328"	"0.02217"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYGGGNEGGR"	"[R].yYGGGNEGGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"629.80414"	"1258.60100"	"1258.60138"	"-0.30"	"-0.00019"	"8/80"	"8"	"80"	"489508.760437012"	"HCD"	"MS2"	"0"	"35.9"	"100.000"	"26.0090"	"5637"	"5637"	"5613"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.2"	""	"35.8"	""	"44.3"	""	"66.6"	"2.6"	"70.2"	"62.7"	""	"280"	"22"	"31.000"	"24.000"	"0.0830095454412"	"16"	"0"	"0.0003141"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83850"	"1258.66973"	"1258.67031"	"-0.47"	"-0.00029"	"8/66"	"8"	"66"	"4457070.76135254"	"HCD"	"MS2"	"24.12263"	"143.2"	"100.000"	"67.2576"	"22356"	"22356"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.0"	""	"126.5"	""	"138.5"	""	"328.3"	"0.5"	"341.8"	"307.5"	""	"592"	"55"	"34.000"	"27.000"	"9.62258400260885E-05"	"16"	"0.0001686"	"0.001344"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83856"	"1258.66985"	"1258.67031"	"-0.37"	"-0.00023"	"7/66"	"7"	"66"	"3988856.88604736"	"HCD"	"MS2"	"22.54386"	"128.6"	"100.000"	"67.1526"	"22283"	"22283"	"22269"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.1"	""	"116.7"	""	"141.7"	""	"286.0"	"0.8"	"298.2"	"280.8"	""	"592"	"42"	"34.000"	"27.000"	"0.0019421899882566"	"15"	"0.001348"	"0.0113"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83868"	"1258.67009"	"1258.67031"	"-0.17"	"-0.00011"	"7/66"	"7"	"66"	"620216.359130859"	"HCD"	"MS2"	"25.16675"	"32.3"	"100.000"	"67.9069"	"22620"	"22620"	"22595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.7"	""	"39.5"	""	"41.4"	""	"58.9"	""	"70.3"	"63.7"	""	"600"	"33"	"34.000"	"27.000"	"0.0138076972074407"	"15"	"0.001261"	"0.009611"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83881"	"1258.67034"	"1258.67031"	"0.02"	"0.00001"	"7/66"	"7"	"66"	"718384.616210938"	"HCD"	"MS2"	"31.47286"	"38.5"	"100.000"	"67.8112"	"22550"	"22550"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.1"	""	"44.1"	""	"51.9"	""	"68.8"	"1.3"	"86.2"	"76.9"	""	"634"	"37"	"35.000"	"28.000"	"0.00615260823196912"	"15"	"0.001103"	"0.009019"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83893"	"1258.67058"	"1258.67031"	"0.21"	"0.00013"	"8/66"	"8"	"66"	"3401838.6239624"	"HCD"	"MS2"	"4.968621"	"124.2"	"100.000"	"67.4519"	"22404"	"22404"	"22391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.8"	""	"110.3"	""	"122.5"	""	"297.0"	""	"260.3"	"272.5"	""	"634"	"58"	"35.000"	"28.000"	"4.67798971048459E-05"	"16"	"0.0001991"	"0.005747"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.83917"	"1258.67107"	"1258.67031"	"0.60"	"0.00038"	"7/66"	"7"	"66"	"2343167.07928467"	"HCD"	"MS2"	"7.885964"	"92.2"	"100.000"	"67.5498"	"22475"	"22475"	"22457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.7"	""	"87.6"	""	"106.0"	""	"190.6"	"0.5"	"207.8"	"204.8"	""	"640"	"48"	"35.000"	"28.000"	"0.0004561944299527"	"16"	"0.001261"	"0.009847"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFAAFPTTK"	"[R].mFAAFPTTk.[T]"	"M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"629.83923"	"1258.67119"	"1258.67031"	"0.70"	"0.00044"	"6/66"	"6"	"66"	"611717.772644043"	"HCD"	"MS2"	"33.46772"	"39.3"	"100.000"	"68.8677"	"23012"	"23012"	"22985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.0"	""	"53.6"	""	"52.9"	""	"64.5"	""	"77.6"	"75.6"	""	"630"	"20"	"34.000"	"27.000"	"0.297379176030066"	"21"	"0.004275"	"0.05028"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTYDDFLK"	"[R].KTYDDFLk.[N]"	"K8(TMT6plex)"	"1"	"1"	"Q9EQ10"	"PCNA-interacting partner OS=Rattus norvegicus OX=10116 GN=Parpbp PE=1 SV=2"	"Q9EQ10"	"PCNA-interacting partner OS=Rattus norvegicus OX=10116 GN=Parpbp PE=1 SV=2"	"1"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"629.85767"	"1258.70806"	"1258.68807"	"15.88"	"0.00999"	"7/76"	"7"	"76"	"608568.940124512"	"HCD"	"MS2"	"35.6577"	"61.6"	"100.000"	"91.2776"	"32035"	"32035"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.0"	""	"85.8"	""	"80.9"	""	"110.9"	"0.3"	"104.8"	"114.6"	""	"717"	"47"	"35.000"	"28.000"	"0.000649365423204127"	"18"	"0.009674"	"0.1287"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEELER"	"[K].qLLEELER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJT0"	"Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1"	"Q5BJT0"	"Arginine and glutamate-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Arglu1 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"629.86395"	"1258.72063"	"1258.72043"	"0.16"	"0.00010"	"6/76"	"6"	"76"	"371234.820556641"	"HCD"	"MS2"	"13.73317"	"24.6"	"100.000"	"95.1477"	"33633"	"33633"	"33607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.8"	""	"27.4"	""	"27.6"	""	"46.9"	"0.8"	"47.8"	"49.1"	""	"739"	"27"	"35.000"	"28.000"	"0.079728655918191"	"27"	"0.0003938"	"0.006336"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"629.87299"	"1258.73870"	"1258.74072"	"-1.61"	"-0.00101"	"6/64"	"6"	"64"	"3176765.03735352"	"HCD"	"MS2"	"2.784892"	"224.3"	"100.000"	"42.7225"	"12364"	"12364"	"12346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.7"	""	"232.3"	""	"245.6"	""	"407.7"	""	"514.4"	"538.7"	""	"745"	"33"	"35.000"	"28.000"	"0.018841968659616"	"26"	"0.0001991"	"0.002815"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTEPQPK"	"[R].tTEPQPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A7E3N2"	"Neutrophil cytosol factor 2 OS=Rattus norvegicus OX=10116 GN=Ncf2 PE=2 SV=1"	"A7E3N2"	"Neutrophil cytosol factor 2 OS=Rattus norvegicus OX=10116 GN=Ncf2 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"629.87323"	"1258.73918"	"1258.74072"	"-1.22"	"-0.00077"	"5/56"	"5"	"56"	"694074.000732422"	"HCD"	"MS2"	"0"	"52.5"	"100.000"	"27.2740"	"6162"	"6162"	"6137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.6"	""	"57.5"	""	"58.8"	""	"95.6"	"0.3"	"105.7"	"108.6"	""	"732"	"20"	"35.000"	"28.000"	"0.34632280105988"	"19"	"0.002559"	"0.02571"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"629.87329"	"1258.73931"	"1258.74072"	"-1.13"	"-0.00071"	"6/64"	"6"	"64"	"4538775.55499268"	"HCD"	"MS2"	"0"	"304.8"	"100.000"	"42.4259"	"12243"	"12243"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"285.1"	""	"291.8"	""	"314.9"	""	"651.4"	""	"674.4"	"690.6"	""	"732"	"35"	"35.000"	"28.000"	"0.0120915252019474"	"27"	"0.0001991"	"0.002739"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTEPQPK"	"[R].tTEPQPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A7E3N2"	"Neutrophil cytosol factor 2 OS=Rattus norvegicus OX=10116 GN=Ncf2 PE=2 SV=1"	"A7E3N2"	"Neutrophil cytosol factor 2 OS=Rattus norvegicus OX=10116 GN=Ncf2 PE=2 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"629.87341"	"1258.73955"	"1258.74072"	"-0.93"	"-0.00059"	"10/56"	"10"	"56"	"665217.951843262"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"27.4998"	"6214"	"6214"	"6196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.5"	""	"57.1"	""	"63.4"	""	"94.4"	""	"85.0"	"87.5"	""	"732"	"29"	"35.000"	"28.000"	"0.0483594202112286"	"24"	"0.001453"	"0.01168"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"629.87360"	"1258.73992"	"1258.74072"	"-0.64"	"-0.00040"	"6/64"	"6"	"64"	"2605363.64367676"	"HCD"	"MS2"	"2.570523"	"195.3"	"100.000"	"42.5778"	"12339"	"12339"	"12319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.1"	""	"192.5"	""	"204.3"	""	"374.9"	""	"425.7"	"465.1"	""	"732"	"33"	"35.000"	"28.000"	"0.0196553637471512"	"26"	"0.0001686"	"0.001446"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELAPDAK"	"[R].gELAPDAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"629.87360"	"1258.73992"	"1258.74072"	"-0.64"	"-0.00040"	"6/64"	"6"	"64"	"5070860.37585449"	"HCD"	"MS2"	"0"	"348.4"	"100.000"	"42.2808"	"12218"	"12218"	"12199"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"328.7"	""	"330.3"	""	"337.6"	""	"750.7"	""	"777.6"	"797.6"	""	"732"	"35"	"35.000"	"28.000"	"0.0120637154656949"	""	"0.0001991"	"0.002319"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEVAPAK"	"[R].aDEVAPAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"629.87390"	"1258.74053"	"1258.74072"	"-0.16"	"-0.00010"	"7/58"	"7"	"58"	"4503949.15124512"	"HCD"	"MS2"	"1.64636"	"296.7"	"100.000"	"38.3165"	"10615"	"10615"	"10596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"422.0"	""	"297.9"	""	"357.5"	""	"500.3"	""	"573.5"	"669.6"	""	"728"	"46"	"35.000"	"28.000"	"0.000895573807909735"	""	"0.0001686"	"0.001334"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADEVAPAK"	"[R].aDEVAPAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"629.87402"	"1258.74077"	"1258.74072"	"0.04"	"0.00002"	"7/58"	"7"	"58"	"3846935.88269043"	"HCD"	"MS2"	"2.346945"	"246.5"	"100.000"	"38.4411"	"10630"	"10630"	"10610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"350.0"	""	"257.1"	""	"299.0"	""	"427.4"	""	"470.1"	"538.5"	""	"709"	"50"	"35.000"	"28.000"	"0.000374641807016242"	""	"9.9E-05"	"0.0004052"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"629.88159"	"1258.75591"	"1258.75682"	"-0.72"	"-0.00046"	"6/70"	"6"	"70"	"3512374.20324707"	"HCD"	"MS2"	"0.6277304"	"160.9"	"100.000"	"103.6875"	"37071"	"37071"	"37054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.3"	""	"185.5"	""	"204.0"	""	"253.2"	""	"302.5"	"392.4"	""	"776"	"40"	"35.000"	"28.000"	"0.00429370028183334"	"25"	"9.9E-05"	"0.0004973"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"629.88196"	"1258.75664"	"1258.75682"	"-0.14"	"-0.00009"	"6/70"	"6"	"70"	"1629705.37249756"	"HCD"	"MS2"	"16.8086"	"78.4"	"100.000"	"102.8875"	"36734"	"36734"	"36714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.7"	""	"98.4"	""	"110.6"	""	"125.5"	"1.9"	"131.1"	"170.1"	""	"775"	"43"	"35.000"	"28.000"	"0.00176307873308144"	"28"	"0"	"0.0002145"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"629.88214"	"1258.75701"	"1258.75682"	"0.15"	"0.00009"	"6/70"	"6"	"70"	"1160731.78723145"	"HCD"	"MS2"	"16.64372"	"60.0"	"100.000"	"103.0979"	"36840"	"36840"	"36825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.6"	""	"71.7"	""	"89.6"	""	"97.0"	""	"101.3"	"131.4"	""	"694"	"43"	"35.000"	"28.000"	"0.00164561968885305"	""	"0"	"0.0001477"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"629.88251"	"1258.75774"	"1258.75682"	"0.73"	"0.00046"	"6/70"	"6"	"70"	"2169041.31872559"	"HCD"	"MS2"	"2.476834"	"108.6"	"100.000"	"103.4991"	"36979"	"36979"	"36962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.0"	""	"121.8"	""	"129.4"	""	"185.0"	""	"204.1"	"259.2"	""	"692"	"33"	"35.000"	"28.000"	"0.015706379936097"	"25"	"9.9E-05"	"0.000645"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"629.88251"	"1258.75774"	"1258.75682"	"0.73"	"0.00046"	"8/70"	"8"	"70"	"28302179.5489502"	"HCD"	"MS2"	"0.04144871"	"430.8"	"35.945"	"103.1895"	"36854"	"36854"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"564.3"	""	"530.2"	""	"636.8"	""	"679.9"	""	"730.8"	"949.2"	""	"692"	"43"	"35.000"	"28.000"	"0.00180749081393696"	""	"9.9E-05"	"0.001014"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDELTLAR"	"[R].vLDELTLAR.[AT]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFV3; Q6IFU8; Q6IFW5; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 12 OS=Rattus norvegicus OX=10116 GN=Krt12 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"629.88263"	"1258.75798"	"1258.75682"	"0.92"	"0.00058"	"8/70"	"8"	"70"	"27429342.3493652"	"HCD"	"MS2"	"0.04443167"	"409.9"	"39.286"	"103.4053"	"36958"	"36958"	"36943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"543.6"	""	"507.9"	""	"593.8"	""	"663.5"	""	"692.3"	"885.8"	""	"692"	"43"	"35.000"	"28.000"	"0.0017785910344752"	""	"0.0001686"	"0.001266"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSQEPK"	"[R].lVSQEPk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"629.89075"	"1258.77422"	"1258.77711"	"-2.30"	"-0.00145"	"7/58"	"7"	"58"	"2223615.2869873"	"HCD"	"MS2"	"44.28936"	"163.2"	"100.000"	"43.5504"	"12703"	"12703"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.2"	""	"206.2"	""	"216.2"	""	"274.2"	"1.9"	"320.2"	"310.1"	""	"559"	"24"	"34.000"	"27.000"	"0.102892048133088"	"24"	"0.00307"	"0.0333"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGGPELK"	"[R].sIGGPELk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"629.89166"	"1258.77605"	"1258.77711"	"-0.84"	"-0.00053"	"12/66"	"12"	"66"	"1069903.99053955"	"HCD"	"MS2"	"8.395657"	"85.5"	"100.000"	"58.5446"	"18789"	"18789"	"18766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.4"	""	"109.8"	""	"120.5"	""	"152.2"	"0.3"	"156.3"	"159.9"	""	"559"	"24"	"34.000"	"27.000"	"0.119779311451084"	"26"	"0.00511"	"0.06517"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIGGPELK"	"[R].sIGGPELk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"Q5M827"	"Pirin OS=Rattus norvegicus OX=10116 GN=Pir PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"629.89221"	"1258.77715"	"1258.77711"	"0.03"	"0.00002"	"12/66"	"12"	"66"	"1063996.66638184"	"HCD"	"MS2"	"15.54251"	"83.1"	"100.000"	"58.2912"	"18721"	"18721"	"18699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.4"	""	"102.0"	""	"127.6"	""	"130.7"	"0.7"	"146.1"	"152.2"	""	"527"	"24"	"34.000"	"27.000"	"0.11716033897811"	"25"	"0.00192"	"0.01609"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGDQGEK"	"[R].aPGDQGEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"630.35284"	"1259.69841"	"1259.69959"	"-0.93"	"-0.00059"	"7/68"	"7"	"68"	"1570084.33636475"	"HCD"	"MS2"	"29.99896"	"105.9"	"100.000"	"25.9011"	"5633"	"5633"	"5605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.3"	""	"81.8"	""	"107.7"	""	"225.4"	""	"283.1"	"217.3"	""	"780"	"36"	"35.000"	"28.000"	"0.0091004864428959"	"21"	"0.0001991"	"0.005043"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APGDQGEK"	"[R].aPGDQGEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"630.35315"	"1259.69902"	"1259.69959"	"-0.45"	"-0.00028"	"6/68"	"6"	"68"	"1360559.8460083"	"HCD"	"MS2"	"45.4438"	"92.7"	"100.000"	"26.0663"	"5660"	"5660"	"5642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.4"	""	"77.8"	""	"92.1"	""	"196.2"	""	"230.2"	"192.2"	""	"779"	"30"	"35.000"	"28.000"	"0.0396741345647078"	"17"	"0.000885"	"0.007682"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"630.35345"	"1259.69963"	"1259.70445"	"-3.82"	"-0.00241"	"6/74"	"6"	"74"	"913135.428894043"	"HCD"	"MS2"	"35.26603"	"37.9"	"100.000"	"104.5061"	"37381"	"37381"	"37371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.7"	""	"22.2"	""	"53.1"	""	"63.6"	"2.2"	"59.7"	"115.5"	""	"760"	"24"	"35.000"	"28.000"	"0.168183581497798"	"20"	"0.004392"	"0.05183"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"630.35352"	"1259.69975"	"1259.70445"	"-3.73"	"-0.00235"	"6/74"	"6"	"74"	"861897.606933594"	"HCD"	"MS2"	"39.67293"	"34.8"	"100.000"	"104.7530"	"37499"	"37499"	"37482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.4"	""	"30.4"	""	"48.6"	""	"55.1"	""	"53.3"	"104.5"	""	"760"	"24"	"35.000"	"28.000"	"0.135139901056214"	"26"	"0.002711"	"0.02826"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASALEELQK"	"[M].aSALEELQk.[D]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"Q6AYK6"	"Calcyclin-binding protein OS=Rattus norvegicus OX=10116 GN=Cacybp PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"630.35382"	"1259.70036"	"1259.70445"	"-3.24"	"-0.00204"	"6/74"	"6"	"74"	"514365.178649902"	"HCD"	"MS2"	"18.23565"	"23.5"	"100.000"	"105.0544"	"37617"	"37617"	"37602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"22.2"	""	"34.0"	""	"34.9"	""	"34.1"	"78.4"	""	"767"	"24"	"35.000"	"28.000"	"0.164348357572418"	"20"	"0.00307"	"0.03416"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEGFYK"	"[K].tGEGFYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"630.35437"	"1259.70146"	"1259.70361"	"-1.70"	"-0.00107"	"6/52"	"6"	"52"	"2341048.71905518"	"HCD"	"MS2"	"2.950055"	"214.2"	"100.000"	"50.9429"	"15704"	"15704"	"15685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.3"	""	"291.7"	""	"305.4"	""	"315.1"	""	"362.8"	"429.3"	""	"764"	"19"	"35.000"	"28.000"	"0.433574131586825"	"15"	"0.004959"	"0.06289"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEGFYK"	"[K].tGEGFYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"630.35492"	"1259.70256"	"1259.70361"	"-0.83"	"-0.00052"	"12/52"	"12"	"52"	"2021618.70141602"	"HCD"	"MS2"	"0"	"183.7"	"100.000"	"50.6357"	"15613"	"15613"	"15594"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.5"	""	"230.9"	""	"278.0"	""	"270.1"	""	"315.4"	"372.0"	""	"892"	"22"	"36.000"	"29.000"	"0.295348560650986"	"16"	"0.003904"	"0.04229"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEGFYK"	"[K].tGEGFYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"630.35516"	"1259.70305"	"1259.70361"	"-0.44"	"-0.00028"	"6/52"	"6"	"52"	"4564545.62860107"	"HCD"	"MS2"	"4.281374"	"384.1"	"100.000"	"50.3460"	"15495"	"15495"	"15476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"603.0"	""	"548.8"	""	"567.1"	""	"560.5"	""	"633.3"	"726.5"	""	"891"	"17"	"36.000"	"29.000"	"0.915899260510936"	"14"	"0.007717"	"0.09797"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEGFYK"	"[K].tGEGFYk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"630.35522"	"1259.70317"	"1259.70361"	"-0.35"	"-0.00022"	"6/52"	"6"	"52"	"3913555.79309082"	"HCD"	"MS2"	"3.915596"	"346.9"	"100.000"	"50.6350"	"15578"	"15578"	"15558"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"566.8"	""	"481.2"	""	"497.5"	""	"537.3"	""	"572.3"	"628.2"	""	"893"	"17"	"36.000"	"29.000"	"0.920071256275055"	"14"	"0.006305"	"0.07854"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"630.36108"	"1259.71489"	"1259.71568"	"-0.63"	"-0.00040"	"7/86"	"7"	"86"	"3245925.96960449"	"HCD"	"MS2"	"0"	"155.0"	"100.000"	"70.6750"	"23713"	"23713"	"23696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.0"	""	"242.1"	""	"245.8"	""	"238.2"	"2.5"	"237.7"	"264.6"	""	"855"	"62"	"36.000"	"29.000"	"2.57001772774101E-05"	"22"	"0"	"1.656E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"630.36121"	"1259.71514"	"1259.71568"	"-0.43"	"-0.00027"	"7/86"	"7"	"86"	"4852026.54107666"	"HCD"	"MS2"	"0.8731726"	"223.2"	"100.000"	"71.0431"	"23894"	"23894"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"352.3"	""	"357.7"	""	"336.5"	""	"333.0"	""	"341.4"	"391.7"	""	"855"	"63"	"36.000"	"29.000"	"2.38746008249995E-05"	"23"	"0"	"1.297E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDEALQR"	"[R].vSLDEALQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"630.36127"	"1259.71526"	"1259.71568"	"-0.34"	"-0.00021"	"7/72"	"7"	"72"	"1580397.128479"	"HCD"	"MS2"	"13.53524"	"88.7"	"100.000"	"73.2243"	"24775"	"24775"	"24759"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.3"	""	"125.2"	""	"131.7"	""	"123.6"	"0.2"	"148.7"	"182.3"	""	"855"	"42"	"36.000"	"29.000"	"0.00285059893838824"	""	"0"	"0.0002529"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"630.36133"	"1259.71538"	"1259.71568"	"-0.24"	"-0.00015"	"8/86"	"8"	"86"	"3212156.5534668"	"HCD"	"MS2"	"1.24563"	"144.8"	"100.000"	"70.7410"	"23772"	"23772"	"23757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.9"	""	"212.0"	""	"226.6"	""	"226.1"	"3.3"	"231.0"	"249.8"	""	"855"	"56"	"36.000"	"29.000"	"0.000110391623149629"	"24"	"0"	"6.765E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"630.36139"	"1259.71550"	"1259.71568"	"-0.14"	"-0.00009"	"7/86"	"7"	"86"	"4916416.57452393"	"HCD"	"MS2"	"0.3690029"	"212.7"	"100.000"	"70.9558"	"23827"	"23827"	"23810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.3"	""	"309.0"	""	"335.9"	""	"339.1"	""	"332.4"	"369.8"	""	"855"	"62"	"36.000"	"29.000"	"2.43184627935742E-05"	"24"	"0"	"1.739E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"630.36139"	"1259.71550"	"1259.71568"	"-0.14"	"-0.00009"	"7/88"	"7"	"88"	"5181916.13909912"	"HCD"	"MS2"	"32.55492"	"208.8"	"100.000"	"45.4410"	"13506"	"13506"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"311.8"	""	"277.0"	""	"276.0"	""	"347.9"	""	"367.8"	"399.2"	""	"855"	"35"	"36.000"	"29.000"	"0.0140260737805858"	"22"	"0"	"3.417E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"630.36145"	"1259.71562"	"1259.71568"	"-0.05"	"-0.00003"	"8/88"	"8"	"88"	"2313203.95898438"	"HCD"	"MS2"	"0"	"114.5"	"100.000"	"46.0402"	"13716"	"13716"	"13700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.1"	""	"129.6"	""	"154.9"	""	"203.1"	"0.4"	"221.3"	"229.8"	""	"876"	"31"	"36.000"	"29.000"	"0.0313670813673251"	"22"	"0.0001991"	"0.003825"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"630.36151"	"1259.71575"	"1259.71568"	"0.05"	"0.00003"	"6/86"	"6"	"86"	"1026910.5546875"	"HCD"	"MS2"	"23.25602"	"63.4"	"100.000"	"71.3380"	"24013"	"24013"	"23996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.5"	""	"84.6"	""	"84.7"	""	"112.1"	""	"114.4"	"118.0"	""	"875"	"25"	"36.000"	"29.000"	"0.143211554009492"	"28"	"0"	"0.00022"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGASILLDGR"	"[K].eGASILLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"630.36176"	"1259.71623"	"1259.71568"	"0.44"	"0.00028"	"7/86"	"7"	"86"	"1189260.01751709"	"HCD"	"MS2"	"31.43629"	"66.5"	"100.000"	"71.2484"	"23945"	"23945"	"23934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.2"	""	"91.9"	""	"96.8"	""	"108.3"	""	"117.1"	"142.0"	""	"869"	"28"	"36.000"	"29.000"	"0.0731121879535118"	"26"	"9.9E-05"	"0.0004427"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSLDEALQR"	"[R].vSLDEALQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"630.36176"	"1259.71623"	"1259.71568"	"0.44"	"0.00028"	"7/72"	"7"	"72"	"1505045.00024414"	"HCD"	"MS2"	"15.97683"	"82.5"	"100.000"	"73.1144"	"24701"	"24701"	"24682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.9"	""	"107.8"	""	"120.8"	""	"113.9"	"0.3"	"136.5"	"175.2"	""	"869"	"38"	"36.000"	"29.000"	"0.00744714450112411"	""	"0"	"0.000238"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"630.36188"	"1259.71648"	"1259.71568"	"0.63"	"0.00040"	"7/88"	"7"	"88"	"2550514.59313965"	"HCD"	"MS2"	"0"	"129.7"	"100.000"	"45.7355"	"13626"	"13626"	"13608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.0"	""	"162.9"	""	"159.6"	""	"222.1"	""	"255.2"	"259.2"	""	"869"	"39"	"36.000"	"29.000"	"0.00605326630879734"	"22"	"0"	"0.0002687"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTAVPASR"	"[K].tDLTAVPASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"630.36224"	"1259.71721"	"1259.71568"	"1.21"	"0.00076"	"7/88"	"7"	"88"	"5584165.78649902"	"HCD"	"MS2"	"25.68262"	"220.1"	"100.000"	"45.7393"	"13593"	"13593"	"13573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"319.4"	""	"288.8"	""	"285.7"	""	"380.1"	""	"383.7"	"432.2"	""	"894"	"43"	"36.000"	"29.000"	"0.00226103623915392"	"23"	"0"	"3.466E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNISPDK"	"[R].qNISPDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"630.37140"	"1259.73552"	"1259.73597"	"-0.36"	"-0.00023"	"6/64"	"6"	"64"	"978690.322509766"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"34.1023"	"8910"	"8910"	"8887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.9"	""	"64.8"	""	"76.2"	""	"161.2"	""	"179.1"	"186.5"	""	"903"	"23"	"36.000"	"29.000"	"0.210212121225616"	"22"	"0.005266"	"0.06681"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNISPDK"	"[R].qNISPDk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"630.37158"	"1259.73589"	"1259.73597"	"-0.07"	"-0.00004"	"10/64"	"10"	"64"	"1152406.44750977"	"HCD"	"MS2"	"15.29633"	"93.6"	"100.000"	"34.2221"	"8922"	"8922"	"8902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.7"	""	"88.0"	""	"82.4"	""	"202.8"	""	"211.0"	"213.2"	""	"888"	"26"	"36.000"	"29.000"	"0.117053113530647"	"24"	"0.004314"	"0.05051"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLVSTGLIR"	"[K].dGLVSTGLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"630.37946"	"1259.75163"	"1259.75207"	"-0.34"	"-0.00022"	"8/82"	"8"	"82"	"1588472.87341309"	"HCD"	"MS2"	"17.37284"	"84.0"	"100.000"	"80.4486"	"27676"	"27676"	"27660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.6"	""	"94.2"	""	"90.4"	""	"178.9"	"0.7"	"160.9"	"170.1"	""	"815"	"40"	"36.000"	"29.000"	"0.00399142169054045"	"28"	"0"	"3.865E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLVSTGLIR"	"[K].dGLVSTGLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"630.37952"	"1259.75176"	"1259.75207"	"-0.25"	"-0.00016"	"8/82"	"8"	"82"	"908363.60760498"	"HCD"	"MS2"	"14.69357"	"47.9"	"100.000"	"80.7579"	"27802"	"27802"	"27782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"54.0"	""	"61.5"	""	"96.5"	"2.0"	"82.5"	"90.7"	""	"815"	"49"	"36.000"	"29.000"	"0.000540913241524869"	"24"	"0"	"3.883E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLVSTGLIR"	"[K].dGLVSTGLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"630.37958"	"1259.75188"	"1259.75207"	"-0.15"	"-0.00009"	"7/82"	"7"	"82"	"714226.043823242"	"HCD"	"MS2"	"20.4154"	"42.3"	"100.000"	"80.8707"	"27875"	"27875"	"27859"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.8"	""	"50.0"	""	"49.6"	""	"82.7"	""	"78.5"	"85.1"	""	"816"	"42"	"36.000"	"29.000"	"0.00258024035361498"	"23"	"0"	"9.423E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLVSTGLIR"	"[K].dGLVSTGLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"630.37994"	"1259.75261"	"1259.75207"	"0.43"	"0.00027"	"8/82"	"8"	"82"	"1758129.37072754"	"HCD"	"MS2"	"16.39356"	"84.9"	"100.000"	"80.5660"	"27751"	"27751"	"27732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.3"	""	"97.6"	""	"95.1"	""	"181.2"	""	"150.0"	"164.9"	""	"720"	"45"	"35.000"	"28.000"	"0.00110484791582082"	""	"0"	"1.406E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLDIK"	"[R].sEPLDIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"3"	"630.38361"	"1259.75994"	"1259.76112"	"-0.94"	"-0.00059"	"5/56"	"5"	"56"	"3795213.79858398"	"HCD"	"MS2"	"23.68978"	"255.7"	"100.000"	"62.2313"	"20318"	"20318"	"20297"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"396.9"	""	"348.6"	""	"327.4"	""	"409.0"	""	"490.7"	"450.7"	""	"733"	"30"	"35.000"	"28.000"	"0.0385544026756211"	"28"	"0.002373"	"0.02259"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDLTPK"	"[K].dIDLTPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"630.38379"	"1259.76030"	"1259.76112"	"-0.65"	"-0.00041"	"10/56"	"10"	"56"	"1694761.85559082"	"HCD"	"MS2"	"10.62797"	"120.5"	"100.000"	"72.0599"	"24273"	"24273"	"24259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.2"	""	"127.7"	""	"141.7"	""	"195.7"	"0.8"	"226.4"	"267.8"	""	"729"	"28"	"35.000"	"28.000"	"0.0593878403897179"	"25"	"0.004213"	"0.04626"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDLTPK"	"[K].dIDLTPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"630.38385"	"1259.76042"	"1259.76112"	"-0.56"	"-0.00035"	"10/56"	"10"	"56"	"2079129.35028076"	"HCD"	"MS2"	"10.62078"	"144.4"	"100.000"	"72.1280"	"24330"	"24330"	"24313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.1"	""	"159.5"	""	"166.3"	""	"231.5"	""	"278.6"	"329.2"	""	"729"	"28"	"35.000"	"28.000"	"0.0580360081010152"	"25"	"0.00212"	"0.01915"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLDIK"	"[R].sEPLDIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"3"	"630.38391"	"1259.76055"	"1259.76112"	"-0.46"	"-0.00029"	"5/56"	"5"	"56"	"3925541.34655762"	"HCD"	"MS2"	"0"	"276.1"	"100.000"	"62.5308"	"20440"	"20440"	"20424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"406.9"	""	"333.0"	""	"340.5"	""	"456.4"	"5.1"	"540.9"	"536.1"	""	"729"	"29"	"35.000"	"28.000"	"0.0419466741770247"	""	"0.003043"	"0.03262"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLDIK"	"[R].sEPLDIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"3"	"630.38397"	"1259.76067"	"1259.76112"	"-0.36"	"-0.00023"	"6/56"	"6"	"56"	"4018488.85131836"	"HCD"	"MS2"	"17.66185"	"279.7"	"100.000"	"62.3112"	"20318"	"20318"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"426.0"	""	"367.6"	""	"347.6"	""	"457.5"	""	"522.2"	"530.6"	""	"729"	"36"	"35.000"	"28.000"	"0.00856441163199209"	""	"0.001827"	"0.01529"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDLTPK"	"[K].dIDLTPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"630.38409"	"1259.76091"	"1259.76112"	"-0.17"	"-0.00011"	"6/56"	"6"	"56"	"7245841.62493896"	"HCD"	"MS2"	"4.053593"	"483.2"	"100.000"	"71.7824"	"24163"	"24163"	"24145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"720.1"	""	"525.6"	""	"567.6"	""	"789.9"	""	"905.2"	"1086.0"	""	"729"	"34"	"35.000"	"28.000"	"0.0162816169339026"	"25"	"0.00307"	"0.03304"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPLDIK"	"[R].sEPLDIk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"3"	"630.38416"	"1259.76103"	"1259.76112"	"-0.07"	"-0.00005"	"5/56"	"5"	"56"	"3404660.94750977"	"HCD"	"MS2"	"0"	"240.4"	"100.000"	"62.6268"	"20446"	"20446"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.8"	""	"295.0"	""	"306.9"	""	"384.6"	"9.7"	"464.2"	"492.3"	""	"726"	"27"	"35.000"	"28.000"	"0.0725949858676687"	""	"0.002711"	"0.0284"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDLTPK"	"[K].dIDLTPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"630.38428"	"1259.76128"	"1259.76112"	"0.12"	"0.00008"	"9/56"	"9"	"56"	"2615873.71148682"	"HCD"	"MS2"	"33.99082"	"169.3"	"100.000"	"71.5477"	"24098"	"24098"	"24080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"273.9"	""	"202.4"	""	"188.7"	""	"292.6"	""	"313.8"	"337.0"	""	"704"	"22"	"35.000"	"28.000"	"0.233637560781472"	"23"	"0.00714"	"0.09155"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDLTPK"	"[K].dIDLTPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"630.38428"	"1259.76128"	"1259.76112"	"0.12"	"0.00008"	"6/56"	"6"	"56"	"7290634.83953857"	"HCD"	"MS2"	"4.458929"	"468.0"	"100.000"	"71.8421"	"24219"	"24219"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"691.7"	""	"531.1"	""	"526.9"	""	"785.0"	""	"860.3"	"1049.5"	""	"704"	"32"	"35.000"	"28.000"	"0.0219049700379544"	"24"	"0.002834"	"0.03065"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDLTPK"	"[K].dIDLTPk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"630.38507"	"1259.76286"	"1259.76112"	"1.38"	"0.00087"	"10/56"	"10"	"56"	"3081599.37487793"	"HCD"	"MS2"	"29.96534"	"196.5"	"100.000"	"71.4836"	"24041"	"24041"	"24021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"297.3"	""	"234.2"	""	"223.0"	""	"339.5"	""	"367.2"	"402.4"	""	"712"	"28"	"35.000"	"28.000"	"0.0601796971665002"	"26"	"0.006845"	"0.08628"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVAELLK"	"[R].eVAELLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"630.40186"	"1259.79643"	"1259.79751"	"-0.85"	"-0.00054"	"6/54"	"6"	"54"	"1446484.23181152"	"HCD"	"MS2"	"26.88255"	"107.9"	"100.000"	"89.3878"	"31274"	"31274"	"31260"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.7"	""	"125.5"	""	"149.8"	""	"196.1"	""	"158.4"	"219.9"	""	"468"	"34"	"33.000"	"26.000"	"0.0104523960563325"	""	"0.0001991"	"0.00414"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QVAEILK"	"[].qVAEILk.[]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"630.40186"	"1259.79643"	"1259.79751"	"-0.85"	"-0.00054"	"6/60"	"6"	"60"	"1446484.23181152"	"HCD"	"MS2"	"26.88255"	"107.9"	"100.000"	"89.3878"	"31274"	"31274"	"31260"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.7"	""	"125.5"	""	"149.8"	""	"196.1"	""	"158.4"	"219.9"	""	"468"	"34"	"33.000"	"26.000"	"0.0104523960563325"	""	"0.0001991"	"0.004141"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVAELLK"	"[R].eVAELLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0303"	"2"	"2"	"2"	"630.40198"	"1259.79668"	"1259.79751"	"-0.66"	"-0.00042"	"6/54"	"6"	"54"	"968240.109375"	"HCD"	"MS2"	"23.60592"	"73.7"	"100.000"	"89.8832"	"31512"	"31512"	"31497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.0"	""	"92.2"	""	"100.8"	""	"114.4"	""	"132.3"	"151.7"	""	"468"	"32"	"33.000"	"26.000"	"0.0146965655962316"	""	"0.001951"	"0.01684"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QVAEILK"	"[].qVAEILk.[]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0303"	"3"	"3"	"3"	"630.40198"	"1259.79668"	"1259.79751"	"-0.66"	"-0.00042"	"6/60"	"6"	"60"	"968240.109375"	"HCD"	"MS2"	"23.60592"	"73.7"	"100.000"	"89.8832"	"31512"	"31512"	"31497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.0"	""	"92.2"	""	"100.8"	""	"114.4"	""	"132.3"	"151.7"	""	"468"	"32"	"33.000"	"26.000"	"0.0146965655962316"	""	"0.001951"	"0.01684"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVAELLK"	"[R].eVAELLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0286"	"2"	"2"	"2"	"630.40210"	"1259.79692"	"1259.79751"	"-0.47"	"-0.00029"	"6/54"	"6"	"54"	"3756801.38250732"	"HCD"	"MS2"	"2.572712"	"265.2"	"100.000"	"89.6653"	"31385"	"31385"	"31378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"423.5"	""	"311.9"	""	"395.6"	""	"436.7"	""	"412.0"	"531.1"	""	"468"	"34"	"33.000"	"26.000"	"0.00881486889622346"	""	"0.003786"	"0.04075"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QVAEILK"	"[].qVAEILk.[]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0286"	"3"	"3"	"3"	"630.40210"	"1259.79692"	"1259.79751"	"-0.47"	"-0.00029"	"6/60"	"6"	"60"	"3756801.38250732"	"HCD"	"MS2"	"2.572712"	"265.2"	"100.000"	"89.6653"	"31385"	"31385"	"31378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"423.5"	""	"311.9"	""	"395.6"	""	"436.7"	""	"412.0"	"531.1"	""	"468"	"34"	"33.000"	"26.000"	"0.00881486889622346"	""	"0.003786"	"0.04076"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLEIK"	"[KR].aIDLEIk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"630.40216"	"1259.79704"	"1259.79751"	"-0.37"	"-0.00023"	"10/52"	"10"	"52"	"769505.910888672"	"HCD"	"MS2"	"53.60532"	"49.6"	"100.000"	"98.6081"	"35030"	"35030"	"35013"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"66.0"	""	"62.7"	""	"84.1"	""	"106.3"	"99.9"	""	"468"	"25"	"33.000"	"26.000"	"0.0807636350045903"	"24"	"0.0001991"	"0.004768"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLELK"	"[KR].aLDLELk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"630.40216"	"1259.79704"	"1259.79751"	"-0.37"	"-0.00023"	"10/52"	"10"	"52"	"769505.910888672"	"HCD"	"MS2"	"53.60532"	"49.6"	"100.000"	"98.6081"	"35030"	"35030"	"35013"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"66.0"	""	"62.7"	""	"84.1"	""	"106.3"	"99.9"	""	"468"	"25"	"33.000"	"26.000"	"0.0807636350045903"	"24"	"0.0001991"	"0.004768"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIDLEIK"	"[KR].aIDLEIk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"Q9Z2J4"	"Nexilin OS=Rattus norvegicus OX=10116 GN=Nexn PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"630.40222"	"1259.79717"	"1259.79751"	"-0.27"	"-0.00017"	"6/52"	"6"	"52"	"737030.989440918"	"HCD"	"MS2"	"54.15199"	"47.7"	"100.000"	"98.5544"	"34979"	"34979"	"34954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"61.7"	""	"55.7"	""	"88.9"	""	"94.5"	"93.8"	""	"468"	"19"	"33.000"	"26.000"	"0.302145310025567"	"22"	"0.001103"	"0.009162"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDLELK"	"[KR].aLDLELk.[GE]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"630.40222"	"1259.79717"	"1259.79751"	"-0.27"	"-0.00017"	"6/52"	"6"	"52"	"737030.989440918"	"HCD"	"MS2"	"54.15199"	"47.7"	"100.000"	"98.5544"	"34979"	"34979"	"34954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"61.7"	""	"55.7"	""	"88.9"	""	"94.5"	"93.8"	""	"468"	"19"	"33.000"	"26.000"	"0.302145310025567"	"22"	"0.001103"	"0.009162"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVAELLK"	"[R].eVAELLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0294"	"2"	"2"	"2"	"630.40228"	"1259.79729"	"1259.79751"	"-0.18"	"-0.00011"	"6/54"	"6"	"54"	"948603.552062988"	"HCD"	"MS2"	"21.29269"	"70.5"	"100.000"	"89.9767"	"31510"	"31510"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.9"	""	"85.3"	""	"104.6"	""	"121.6"	""	"99.6"	"145.4"	""	"467"	"33"	"33.000"	"26.000"	"0.010946792473092"	""	"0.00452"	"0.05287"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QVAEILK"	"[].qVAEILk.[]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0294"	"3"	"3"	"3"	"630.40228"	"1259.79729"	"1259.79751"	"-0.18"	"-0.00011"	"6/60"	"6"	"60"	"948603.552062988"	"HCD"	"MS2"	"21.29269"	"70.5"	"100.000"	"89.9767"	"31510"	"31510"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.9"	""	"85.3"	""	"104.6"	""	"121.6"	""	"99.6"	"145.4"	""	"467"	"33"	"33.000"	"26.000"	"0.010946792473092"	""	"0.00452"	"0.05287"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EVAELLK"	"[R].eVAELLk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	""	"0.0294"	"2"	"2"	"2"	"630.40259"	"1259.79790"	"1259.79751"	"0.31"	"0.00019"	"6/54"	"6"	"54"	"3708912.15734863"	"HCD"	"MS2"	"4.593275"	"263.9"	"100.000"	"89.5996"	"31399"	"31399"	"31387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"420.6"	""	"302.7"	""	"402.6"	""	"419.2"	""	"402.1"	"551.4"	""	"425"	"33"	"33.000"	"26.000"	"0.0113073005094194"	""	"0.00981"	"0.132"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"QVAEILK"	"[].qVAEILk.[]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0294"	"3"	"3"	"3"	"630.40259"	"1259.79790"	"1259.79751"	"0.31"	"0.00019"	"6/60"	"6"	"60"	"3708912.15734863"	"HCD"	"MS2"	"4.593275"	"263.9"	"100.000"	"89.5996"	"31399"	"31399"	"31387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"420.6"	""	"302.7"	""	"402.6"	""	"419.2"	""	"402.1"	"551.4"	""	"425"	"33"	"33.000"	"26.000"	"0.0113073005094194"	""	"0.00981"	"0.132"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMSAYEQR"	"[R].fMSAYEQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"630.81500"	"1260.62273"	"1260.62442"	"-1.34"	"-0.00085"	"6/64"	"6"	"64"	"631630.10369873"	"HCD"	"MS2"	"0"	"48.1"	"100.000"	"56.7827"	"18106"	"18106"	"18085"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.0"	""	"56.4"	""	"55.5"	""	"73.6"	"3.1"	"91.8"	"105.9"	""	"390"	"38"	"32.000"	"25.000"	"0.0034676448495759"	"22"	"0.001261"	"0.009857"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FMSAYEQR"	"[R].fMSAYEQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"Q6AXT8"	"Splicing factor 3A subunit 2 OS=Rattus norvegicus OX=10116 GN=Sf3a2 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"630.81506"	"1260.62285"	"1260.62442"	"-1.25"	"-0.00079"	"6/64"	"6"	"64"	"630149.8359375"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"57.0545"	"18182"	"18182"	"18156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	""	"57.2"	""	"58.0"	""	"72.6"	"1.8"	"91.4"	"100.5"	""	"389"	"35"	"32.000"	"25.000"	"0.0067907791360585"	"19"	"0.001596"	"0.01307"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"420.88174"	"1260.63068"	"1260.63229"	"-1.27"	"-0.00054"	"6/68"	"6"	"68"	"18713816.1665039"	"HCD"	"MS2"	"8.325599"	"112.9"	"38.300"	"35.8168"	"9603"	"9603"	"9586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.1"	""	"122.9"	""	"147.8"	""	"172.8"	""	"257.1"	"239.3"	""	"444"	"23"	"33.000"	"26.000"	"0.114117690651299"	"17"	"0.001488"	"0.01228"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"420.88190"	"1260.63114"	"1260.63229"	"-0.91"	"-0.00038"	"11/68"	"11"	"68"	"24338533.1401367"	"HCD"	"MS2"	"8.148795"	"99.3"	"26.242"	"35.9131"	"9606"	"9606"	"9589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.2"	""	"116.5"	""	"137.0"	""	"159.0"	"1.4"	"203.2"	"201.8"	""	"443"	"30"	"33.000"	"26.000"	"0.0199238714308903"	"22"	"0.0001991"	"0.002375"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"420.88208"	"1260.63169"	"1260.63229"	"-0.48"	"-0.00020"	"11/68"	"11"	"68"	"16943318.4235229"	"HCD"	"MS2"	"24.90597"	"261.2"	"99.184"	"35.6079"	"9481"	"9481"	"9463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.7"	""	"289.8"	""	"306.9"	""	"480.1"	""	"604.5"	"552.0"	""	"455"	"30"	"33.000"	"26.000"	"0.0205580255271824"	"22"	"0.0001991"	"0.003684"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWYPAHSR"	"[R].dWYPAHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"420.88275"	"1260.63370"	"1260.63229"	"1.12"	"0.00047"	"11/68"	"11"	"68"	"20105809.3613892"	"HCD"	"MS2"	"17.16809"	"312.2"	"100.000"	"35.5069"	"9477"	"9477"	"9464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.9"	""	"336.0"	""	"360.7"	""	"573.6"	""	"721.3"	"683.5"	""	"456"	"33"	"33.000"	"26.000"	"0.0117742932194032"	"23"	"0.0001991"	"0.002357"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGSSPLHR"	"[K].dYGSSPLHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"630.83026"	"1260.65325"	"1260.65342"	"-0.13"	"-0.00008"	"6/72"	"6"	"72"	"373111.176635742"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"29.5896"	"7098"	"7098"	"7075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.8"	""	"34.2"	""	"29.9"	""	"63.3"	""	"51.9"	"49.5"	""	"570"	"21"	"34.000"	"27.000"	"0.212248612563207"	"18"	"0.001348"	"0.01052"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYGSSPLHR"	"[K].dYGSSPLHR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"630.83118"	"1260.65508"	"1260.65342"	"1.32"	"0.00083"	"7/72"	"7"	"72"	"368177.133789063"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"29.7651"	"7129"	"7129"	"7106"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.3"	""	"29.3"	""	"24.9"	""	"54.0"	""	"57.0"	"50.3"	""	"622"	"44"	"34.000"	"27.000"	"0.00125244997675218"	"19"	"0.0001686"	"0.001383"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"630.84259"	"1260.67790"	"1260.67857"	"-0.53"	"-0.00033"	"7/68"	"7"	"68"	"1079537.00048828"	"HCD"	"MS2"	"13.93189"	"55.0"	"100.000"	"70.1264"	"23490"	"23490"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.5"	""	"72.7"	""	"71.5"	""	"98.3"	"1.9"	"107.0"	"95.0"	""	"823"	"14"	"36.000"	"29.000"	"1.49406619537897"	"16"	"0.002286"	"0.02166"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"630.84271"	"1260.67815"	"1260.67857"	"-0.33"	"-0.00021"	"7/68"	"7"	"68"	"3685590.82385254"	"HCD"	"MS2"	"0"	"153.4"	"100.000"	"70.4214"	"23609"	"23609"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.1"	""	"218.1"	""	"224.6"	""	"232.9"	""	"265.0"	"283.4"	""	"819"	"26"	"36.000"	"29.000"	"0.11200925434226"	"25"	"0.002628"	"0.02758"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"630.84290"	"1260.67851"	"1260.67857"	"-0.04"	"-0.00003"	"7/68"	"7"	"68"	"3612170.23040771"	"HCD"	"MS2"	"0"	"146.4"	"100.000"	"70.4970"	"23674"	"23674"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.9"	""	"207.0"	""	"208.8"	""	"227.7"	"1.6"	"271.4"	"275.1"	""	"831"	"26"	"36.000"	"29.000"	"0.115763334556567"	"25"	"0.002328"	"0.0221"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPELTWER"	"[R].tPELTWER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"630.84296"	"1260.67864"	"1260.67857"	"0.05"	"0.00003"	"7/68"	"7"	"68"	"1062430.15515137"	"HCD"	"MS2"	"4.828474"	"52.3"	"100.000"	"70.2065"	"23556"	"23556"	"23533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.5"	""	"68.3"	""	"74.4"	""	"84.6"	""	"99.8"	"99.4"	""	"816"	"15"	"36.000"	"29.000"	"1.4277762814757"	"15"	"0.001999"	"0.01739"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGIQWDLR"	"[R].gSGIQWDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.84723"	"1260.68718"	"1260.68980"	"-2.08"	"-0.00131"	"7/82"	"7"	"82"	"927134.086791992"	"HCD"	"MS2"	"4.806214"	"43.7"	"100.000"	"77.9807"	"26672"	"26672"	"26653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.7"	""	"56.9"	""	"55.6"	""	"75.7"	""	"79.8"	"88.1"	""	"890"	"23"	"36.000"	"29.000"	"0.207185811617717"	"14"	"0.0001991"	"0.005968"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGIQWDLR"	"[R].gSGIQWDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"Q641Y2"	"NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.84796"	"1260.68865"	"1260.68980"	"-0.92"	"-0.00058"	"7/82"	"7"	"82"	"850623.938415527"	"HCD"	"MS2"	"7.280939"	"40.3"	"100.000"	"78.0590"	"26731"	"26731"	"26713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.3"	""	"54.8"	""	"58.6"	""	"64.2"	"2.6"	"70.5"	"76.5"	""	"850"	"19"	"36.000"	"29.000"	"0.535043300012522"	"14"	"0.001872"	"0.01577"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"630.85864"	"1260.71001"	"1260.71093"	"-0.73"	"-0.00046"	"7/88"	"7"	"88"	"2324940.22509766"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"60.0408"	"19431"	"19431"	"19413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.9"	""	"146.2"	""	"149.2"	""	"178.0"	"1.3"	"225.4"	"247.1"	""	"843"	"57"	"36.000"	"29.000"	"8.16201857803494E-05"	""	"0"	"1.243E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"630.85876"	"1260.71025"	"1260.71093"	"-0.54"	"-0.00034"	"6/88"	"6"	"88"	"343226.166320801"	"HCD"	"MS2"	"9.174782"	"30.2"	"100.000"	"60.3517"	"19558"	"19558"	"19537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"37.0"	""	"35.0"	""	"50.9"	"0.4"	"66.5"	"55.9"	""	"845"	"18"	"36.000"	"29.000"	"0.648375675232701"	"22"	"0.002035"	"0.01794"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"630.85876"	"1260.71025"	"1260.71093"	"-0.54"	"-0.00034"	"7/88"	"7"	"88"	"2747449.66119385"	"HCD"	"MS2"	"7.793788"	"144.8"	"100.000"	"59.9007"	"19341"	"19341"	"19321"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.5"	""	"179.6"	""	"184.6"	""	"225.4"	"3.9"	"273.1"	"298.1"	""	"845"	"52"	"36.000"	"29.000"	"0.000265354656598626"	""	"0"	"4.308E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"630.85889"	"1260.71050"	"1260.71093"	"-0.34"	"-0.00022"	"4/88"	"4"	"88"	"1281939.20471191"	"HCD"	"MS2"	"44.26843"	"86.8"	"100.000"	"48.2241"	"14597"	"14597"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.0"	""	"111.8"	""	"111.9"	""	"127.6"	""	"171.6"	"178.1"	""	"845"	"12"	"36.000"	"29.000"	"2.59314447182125"	"23"	"0.003357"	"0.03734"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"630.85889"	"1260.71050"	"1260.71093"	"-0.34"	"-0.00022"	"7/88"	"7"	"88"	"2304708.58441162"	"HCD"	"MS2"	"16.4006"	"118.6"	"100.000"	"59.7299"	"19305"	"19305"	"19288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.2"	""	"147.5"	""	"142.2"	""	"193.4"	""	"214.9"	"256.5"	""	"845"	"43"	"36.000"	"29.000"	"0.00192232455413395"	""	"0"	"0.000121"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAADLISQAR"	"[K].sAADLISQAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"630.85913"	"1260.71099"	"1260.71093"	"0.04"	"0.00003"	"7/88"	"7"	"88"	"2040634.5791626"	"HCD"	"MS2"	"0"	"107.2"	"100.000"	"60.2114"	"19467"	"19467"	"19451"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.4"	""	"137.4"	""	"133.9"	""	"171.6"	"2.4"	"198.7"	"211.0"	""	"918"	"57"	"36.000"	"29.000"	"8.76622645681903E-05"	""	"0"	"3.704E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIEMEQR"	"[K].lLIEMEQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"630.86078"	"1260.71428"	"1260.71832"	"-3.21"	"-0.00202"	"6/62"	"6"	"62"	"444363.65435791"	"HCD"	"MS2"	"12.04794"	"28.2"	"100.000"	"92.2510"	"32431"	"32431"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"42.1"	""	"42.7"	""	"42.4"	""	"50.6"	"52.3"	""	"876"	"30"	"36.000"	"29.000"	"0.0465022654053042"	"20"	"0.001488"	"0.01261"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APEDLAFLR"	"[R].aPEDLAFLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"630.86078"	"1260.71428"	"1260.71495"	"-0.53"	"-0.00034"	"11/66"	"11"	"66"	"877922.290344238"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"100.4404"	"35771"	"35771"	"35753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"55.7"	""	"44.4"	""	"62.7"	"0.2"	"73.3"	"79.6"	""	"876"	"37"	"36.000"	"29.000"	"0.00913007006796612"	"17"	"0"	"7.407E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APEDLAFLR"	"[R].aPEDLAFLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"630.86090"	"1260.71453"	"1260.71495"	"-0.34"	"-0.00021"	"6/66"	"6"	"66"	"596517.512634277"	"HCD"	"MS2"	"13.05271"	"30.0"	"100.000"	"100.0424"	"35582"	"35582"	"35556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.1"	""	"40.3"	""	"35.9"	""	"53.7"	""	"53.8"	"65.9"	""	"876"	"22"	"36.000"	"29.000"	"0.2555489556719"	"17"	"0.001103"	"0.009111"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APEDLAFLR"	"[R].aPEDLAFLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"630.86121"	"1260.71514"	"1260.71495"	"0.14"	"0.00009"	"9/66"	"9"	"66"	"629239.711669922"	"HCD"	"MS2"	"23.68516"	"30.2"	"100.000"	"100.1451"	"35651"	"35651"	"35633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"37.3"	""	"41.1"	""	"54.9"	""	"58.7"	"59.6"	""	"850"	"27"	"36.000"	"29.000"	"0.0881838244918338"	"15"	"0.0007633"	"0.007407"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APEDLAFLR"	"[R].aPEDLAFLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"630.86133"	"1260.71538"	"1260.71495"	"0.34"	"0.00021"	"11/66"	"11"	"66"	"746635.092773438"	"HCD"	"MS2"	"1.684558"	"32.5"	"100.000"	"100.3586"	"35710"	"35710"	"35692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.0"	""	"42.0"	""	"45.7"	""	"56.9"	""	"56.4"	"63.0"	""	"850"	"41"	"36.000"	"29.000"	"0.00355131282748281"	"22"	"0.0001686"	"0.001262"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIEMEQR"	"[K].lLIEMEQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"630.86200"	"1260.71672"	"1260.71832"	"-1.27"	"-0.00080"	"6/62"	"6"	"62"	"715715.500915527"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"92.2318"	"32458"	"32458"	"32437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"57.7"	""	"57.9"	""	"46.2"	""	"62.2"	"63.1"	""	"863"	"31"	"36.000"	"29.000"	"0.0325822296237635"	"24"	"0.0001991"	"0.002056"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIEMEQR"	"[K].lLIEMEQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"630.86218"	"1260.71709"	"1260.71832"	"-0.98"	"-0.00062"	"5/62"	"5"	"62"	"3717206.43414307"	"HCD"	"MS2"	"4.910405"	"201.4"	"100.000"	"92.5242"	"32577"	"32577"	"32561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.3"	""	"299.5"	""	"301.2"	""	"265.0"	""	"357.0"	"361.7"	""	"877"	"32"	"36.000"	"29.000"	"0.0265441973579591"	"25"	"0.0005778"	"0.007155"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIEMEQR"	"[K].lLIEMEQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"630.86237"	"1260.71745"	"1260.71832"	"-0.69"	"-0.00043"	"6/62"	"6"	"62"	"3338341.42822266"	"HCD"	"MS2"	"1.761079"	"161.2"	"100.000"	"92.5554"	"32554"	"32554"	"32536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"286.3"	""	"240.2"	""	"260.1"	""	"205.3"	""	"263.1"	"270.1"	""	"881"	"34"	"36.000"	"29.000"	"0.0171769445131017"	"23"	"0.0001991"	"0.00585"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLTVDLSR"	"[R].dLLTVDLSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"0"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"630.87146"	"1260.73564"	"1260.73608"	"-0.35"	"-0.00022"	"8/78"	"8"	"78"	"920404.799499512"	"HCD"	"MS2"	"8.144502"	"51.1"	"100.000"	"98.9076"	"35121"	"35121"	"35103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.2"	""	"58.9"	""	"63.7"	""	"91.6"	""	"101.0"	"105.0"	""	"756"	"23"	"35.000"	"28.000"	"0.184710591831591"	""	"9.9E-05"	"0.0004285"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLTVDLSR"	"[R].dLLTVDLSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"Q62894"	"Extracellular matrix protein 1 OS=Rattus norvegicus OX=10116 GN=Ecm1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0435"	"2"	"2"	"2"	"630.87164"	"1260.73601"	"1260.73608"	"-0.06"	"-0.00004"	"8/78"	"8"	"78"	"886343.20501709"	"HCD"	"MS2"	"13.53864"	"48.9"	"100.000"	"98.9362"	"35163"	"35163"	"35146"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"61.2"	""	"60.9"	""	"82.2"	""	"103.3"	"99.5"	""	"756"	"22"	"35.000"	"28.000"	"0.23307291070364"	"22"	"0.002525"	"0.02496"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTELEATVR"	"[R].lTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"630.87286"	"1260.73845"	"1260.73608"	"1.88"	"0.00118"	"7/74"	"7"	"74"	"1882529.93682861"	"HCD"	"MS2"	"15.56144"	"102.1"	"100.000"	"84.6621"	"29379"	"29379"	"29363"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.1"	""	"131.0"	""	"140.1"	""	"187.9"	""	"192.8"	"180.0"	""	"669"	"33"	"35.000"	"28.000"	"0.0157179579328444"	"27"	"9.9E-05"	"0.0008701"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNLTVSAVR"	"[R].aTNLTVSAVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"630.87720"	"1260.74712"	"1260.74732"	"-0.16"	"-0.00010"	"9/96"	"9"	"96"	"1381856.98461914"	"HCD"	"MS2"	"46.6992"	"94.9"	"100.000"	"48.1734"	"14576"	"14576"	"14557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.1"	""	"134.1"	""	"124.5"	""	"147.4"	""	"164.0"	"195.0"	""	"699"	"35"	"35.000"	"28.000"	"0.0118153660253991"	"22"	"0"	"4.822E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLELEK"	"[R].gNLELEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVE9"	"Intersectin-1 OS=Rattus norvegicus OX=10116 GN=Itsn1 PE=1 SV=2"	"Q9WVE9"	"Intersectin-1 OS=Rattus norvegicus OX=10116 GN=Itsn1 PE=1 SV=2"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"630.88086"	"1260.75444"	"1260.75637"	"-1.53"	"-0.00097"	"10/62"	"10"	"62"	"588219.788757324"	"HCD"	"MS2"	"0"	"59.8"	"100.000"	"57.2606"	"18300"	"18300"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.1"	""	"68.2"	""	"80.4"	""	"101.8"	""	"97.9"	"132.2"	""	"699"	"21"	"35.000"	"28.000"	"0.275706611107685"	""	"0.002189"	"0.02017"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLELEK"	"[R].gNLELEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVE9"	"Intersectin-1 OS=Rattus norvegicus OX=10116 GN=Itsn1 PE=1 SV=2"	"Q9WVE9"	"Intersectin-1 OS=Rattus norvegicus OX=10116 GN=Itsn1 PE=1 SV=2"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"630.88104"	"1260.75481"	"1260.75637"	"-1.24"	"-0.00078"	"10/62"	"10"	"62"	"572555.165710449"	"HCD"	"MS2"	"24.56265"	"57.9"	"100.000"	"57.4519"	"18343"	"18343"	"18314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.1"	""	"61.7"	""	"70.9"	""	"93.9"	""	"100.0"	"129.5"	""	"675"	"23"	"35.000"	"28.000"	"0.18124823127496"	""	"0.001261"	"0.00984"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALGDK"	"[R].dLAALGDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"630.88123"	"1260.75517"	"1260.75637"	"-0.95"	"-0.00060"	"6/68"	"6"	"68"	"1573542.63909912"	"HCD"	"MS2"	"7.311093"	"107.5"	"100.000"	"74.6802"	"25368"	"25368"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.0"	""	"138.2"	""	"127.0"	""	"152.8"	"0.3"	"215.2"	"252.4"	""	"675"	"32"	"35.000"	"28.000"	"0.0217908302299196"	""	"9.9E-05"	"0.0007727"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGLDK"	"[R].vGVnGLDk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"630.88135"	"1260.75542"	"1260.75637"	"-0.76"	"-0.00048"	"7/64"	"7"	"64"	"818787.208740234"	"HCD"	"MS2"	"0"	"70.0"	"100.000"	"65.4772"	"21604"	"21604"	"21583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.0"	""	"89.4"	""	"90.5"	""	"125.4"	""	"130.2"	"136.4"	""	"669"	"32"	"35.000"	"28.000"	"0.0217969697813352"	""	"9.9E-05"	"0.0005766"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALGDK"	"[R].dLAALGDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"630.88165"	"1260.75603"	"1260.75637"	"-0.27"	"-0.00017"	"6/68"	"6"	"68"	"1546966.50811768"	"HCD"	"MS2"	"11.43818"	"110.4"	"100.000"	"74.5663"	"25291"	"25291"	"25275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.3"	""	"136.5"	""	"124.3"	""	"165.4"	""	"213.3"	"260.9"	""	"669"	"32"	"35.000"	"28.000"	"0.0223046864301956"	""	"9.9E-05"	"0.0006835"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGLDK"	"[R].vGVnGLDk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"630.88177"	"1260.75627"	"1260.75637"	"-0.08"	"-0.00005"	"4/64"	"4"	"64"	"663277.62701416"	"HCD"	"MS2"	"10.77479"	"60.1"	"100.000"	"62.9699"	"20586"	"20586"	"20561"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.3"	""	"72.3"	""	"70.2"	""	"104.9"	""	"119.1"	"127.8"	""	"649"	"18"	"35.000"	"28.000"	"0.499131180778335"	"22"	"0.002035"	"0.01771"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALGDK"	"[R].dLAALGDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.2188"	"0.0000"	"1"	"1"	"1"	"630.88196"	"1260.75664"	"1260.75637"	"0.21"	"0.00013"	"6/68"	"6"	"68"	"2963947.98077393"	"HCD"	"MS2"	"2.745683"	"213.0"	"100.000"	"74.8454"	"25404"	"25404"	"25390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.4"	""	"256.9"	""	"250.8"	""	"309.2"	""	"406.5"	"542.7"	""	"637"	"32"	"35.000"	"28.000"	"0.0187546704230755"	""	"0.0001686"	"0.001287"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGLDK"	"[R].vGVnGLDk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"630.88208"	"1260.75688"	"1260.75637"	"0.40"	"0.00025"	"7/64"	"7"	"64"	"728404.742492676"	"HCD"	"MS2"	"9.163882"	"60.4"	"100.000"	"65.4783"	"21638"	"21638"	"21616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.4"	""	"76.5"	""	"76.7"	""	"113.6"	"1.1"	"109.9"	"116.2"	""	"637"	"34"	"35.000"	"28.000"	"0.0136807351924616"	"28"	"0.0001686"	"0.00118"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNAEDIK"	"[K].lNAEDIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"630.88214"	"1260.75701"	"1260.75637"	"0.50"	"0.00032"	"6/60"	"6"	"60"	"2655129.0657959"	"HCD"	"MS2"	"9.817738"	"210.5"	"100.000"	"61.5844"	"20023"	"20023"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.9"	""	"179.8"	""	"205.9"	""	"399.1"	""	"480.2"	"523.3"	""	"637"	"33"	"35.000"	"28.000"	"0.0161105154847992"	""	"0.001827"	"0.01529"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LNAEDIK"	"[K].lNAEDIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	""	"0.0345"	"2"	"2"	"2"	"630.88220"	"1260.75713"	"1260.75637"	"0.60"	"0.00038"	"12/60"	"12"	"60"	"559981.028869629"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"61.2841"	"19905"	"19905"	"19880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.7"	""	"49.1"	""	"59.5"	""	"105.1"	""	"110.5"	"119.7"	""	"637"	"28"	"35.000"	"28.000"	"0.0491031594264434"	""	"0.001872"	"0.01542"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALGDK"	"[R].dLAALGDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"630.88220"	"1260.75713"	"1260.75637"	"0.60"	"0.00038"	"7/68"	"7"	"68"	"2777882.21166992"	"HCD"	"MS2"	"3.265662"	"195.8"	"100.000"	"74.9822"	"25490"	"25490"	"25472"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.1"	""	"241.0"	""	"231.3"	""	"264.7"	""	"367.4"	"491.4"	""	"637"	"35"	"35.000"	"28.000"	"0.00984259095255577"	""	"0.0001686"	"0.001589"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVNGLDK"	"[R].vGVnGLDk.[A]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"Q6P686"	"Osteoclast-stimulating factor 1 OS=Rattus norvegicus OX=10116 GN=Ostf1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"630.88239"	"1260.75749"	"1260.75637"	"0.89"	"0.00056"	"9/64"	"9"	"64"	"675674.958496094"	"HCD"	"MS2"	"7.743294"	"57.6"	"100.000"	"62.9245"	"20600"	"20600"	"20576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.2"	""	"67.5"	""	"75.2"	""	"97.1"	""	"107.0"	"117.7"	""	"637"	"21"	"35.000"	"28.000"	"0.260081485277712"	"27"	"0.001951"	"0.01704"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEVSVALK"	"[K].gEVSVALk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"Q3ZAV8"	"Enhancer of mRNA-decapping protein 4 OS=Rattus norvegicus OX=10116 GN=Edc4 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"630.90009"	"1260.79289"	"1260.79276"	"0.11"	"0.00007"	"5/60"	"5"	"60"	"397454.487060547"	"HCD"	"MS2"	"28.84405"	"41.3"	"100.000"	"63.2057"	"20714"	"20714"	"20689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.2"	""	"46.3"	""	"50.6"	""	"64.4"	"2.1"	"78.6"	"81.2"	""	"437"	"27"	"33.000"	"26.000"	"0.0427023171086924"	"24"	"0.0001991"	"0.002682"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGSLPESSR"	"[R].aEGSLPESSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"631.33258"	"1261.65788"	"1261.65856"	"-0.54"	"-0.00034"	"7/86"	"7"	"86"	"554591.19128418"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"29.2280"	"6910"	"6910"	"6885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"30.0"	""	"32.5"	""	"63.3"	""	"78.6"	"80.2"	""	"659"	"35"	"35.000"	"28.000"	"0.0102059965909186"	"23"	"0.0001686"	"0.001126"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEGSLPESSR"	"[R].aEGSLPESSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"631.33270"	"1261.65813"	"1261.65856"	"-0.34"	"-0.00022"	"8/86"	"8"	"86"	"498569.157653809"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"29.1011"	"6899"	"6899"	"6873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"32.7"	""	"26.9"	""	"64.7"	""	"72.0"	"71.8"	""	"659"	"34"	"35.000"	"28.000"	"0.0121578118728865"	"22"	"0.0001991"	"0.003042"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIDVIMGGGR"	"[K].dIDVIMGGGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"631.34125"	"1261.67522"	"1261.67719"	"-1.56"	"-0.00098"	"8/76"	"8"	"76"	"314901.245788574"	"HCD"	"MS2"	"15.17616"	"23.1"	"100.000"	"85.6373"	"29773"	"29773"	"29746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"27.3"	""	"40.5"	""	"36.0"	""	"37.3"	"51.2"	""	"763"	"35"	"35.000"	"28.000"	"0.0132890685686239"	"24"	"0"	"0.0002904"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEMTHSK"	"[K].aEMTHSk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55159"	"Epithelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Epcam PE=1 SV=1"	"O55159"	"Epithelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Epcam PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"421.23666"	"1261.69544"	"1261.69748"	"-1.62"	"-0.00068"	"7/56"	"7"	"56"	"1383669.41241455"	"HCD"	"MS2"	"20.82778"	"100.6"	"100.000"	"22.9692"	"4425"	"4425"	"4412"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"143.5"	""	"139.0"	""	"145.3"	"5.1"	"190.3"	"199.2"	""	"851"	"14"	"36.000"	"29.000"	"1.79845495370014"	"13"	"0.004819"	"0.05769"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEMTHSK"	"[K].aEMTHSk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55159"	"Epithelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Epcam PE=1 SV=1"	"O55159"	"Epithelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Epcam PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"421.23679"	"1261.69580"	"1261.69748"	"-1.33"	"-0.00056"	"6/56"	"6"	"56"	"937816.061523438"	"HCD"	"MS2"	"20.40549"	"66.9"	"100.000"	"22.8627"	"4423"	"4423"	"4418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.9"	""	"97.9"	""	"91.9"	""	"108.3"	"2.9"	"121.2"	"126.8"	""	"853"	"13"	"36.000"	"29.000"	"1.94948112870744"	"13"	"0.00452"	"0.05236"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASPDAAGK"	"[K].sASPDAAGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"631.36108"	"1261.71489"	"1261.71524"	"-0.27"	"-0.00017"	"8/72"	"8"	"72"	"484872.507202148"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"27.4768"	"6205"	"6205"	"6183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"56.0"	""	"55.6"	""	"72.9"	"1.2"	"63.8"	"80.8"	""	"865"	"35"	"36.000"	"29.000"	"0.0146213041659087"	"24"	"0.0001991"	"0.003615"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASPDAAGK"	"[K].sASPDAAGk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"O70511"	"Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"631.36145"	"1261.71562"	"1261.71524"	"0.31"	"0.00019"	"8/72"	"8"	"72"	"556881.626403809"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"27.2075"	"6135"	"6135"	"6112"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.1"	""	"57.7"	""	"61.1"	""	"92.7"	"0.6"	"81.5"	"99.2"	""	"883"	"38"	"36.000"	"29.000"	"0.00638161658784327"	"25"	"0.0001991"	"0.00353"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"631.36835"	"1261.72942"	"1261.73133"	"-1.52"	"-0.00096"	"8/86"	"8"	"86"	"3921203.00238037"	"HCD"	"MS2"	"11.57426"	"210.9"	"100.000"	"44.0886"	"12957"	"12957"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"286.6"	""	"286.6"	""	"310.6"	""	"350.6"	""	"370.0"	"397.0"	""	"849"	"49"	"36.000"	"29.000"	"0.000524659685497195"	"22"	"0"	"6.569E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSGIDFK"	"[K].hSGIDFk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"421.24802"	"1261.72950"	"1261.73049"	"-0.79"	"-0.00033"	"7/54"	"7"	"54"	"4702901.7991333"	"HCD"	"MS2"	"5.225864"	"225.2"	"100.000"	"40.0002"	"11261"	"11261"	"11244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"315.4"	""	"312.9"	""	"328.4"	""	"353.0"	"4.8"	"412.5"	"406.5"	""	"849"	"20"	"36.000"	"29.000"	"0.390730843209221"	"26"	"0.001103"	"0.008967"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"631.36865"	"1261.73003"	"1261.73133"	"-1.03"	"-0.00065"	"8/86"	"8"	"86"	"3863889.39257813"	"HCD"	"MS2"	"16.92099"	"198.6"	"100.000"	"44.2786"	"12999"	"12999"	"12977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.1"	""	"276.7"	""	"293.1"	""	"324.3"	"2.2"	"343.9"	"349.6"	""	"844"	"51"	"36.000"	"29.000"	"0.000323826548510688"	"23"	"0"	"1.192E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSGIDFK"	"[K].hSGIDFk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"421.24823"	"1261.73014"	"1261.73049"	"-0.28"	"-0.00012"	"7/54"	"7"	"54"	"5044075.64294434"	"HCD"	"MS2"	"7.628599"	"243.8"	"100.000"	"39.9063"	"11257"	"11257"	"11241"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"337.3"	""	"352.4"	""	"340.4"	""	"384.5"	""	"428.0"	"467.4"	""	"844"	"22"	"36.000"	"29.000"	"0.277531607363987"	"28"	"0.0005161"	"0.006799"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVTGTLER"	"[R].gTVVTGTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"631.37109"	"1261.73491"	"1261.73133"	"2.84"	"0.00179"	"7/86"	"7"	"86"	"1497185.00976563"	"HCD"	"MS2"	"5.721749"	"94.9"	"100.000"	"44.5561"	"13112"	"13112"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.0"	""	"125.8"	""	"144.7"	""	"158.2"	""	"165.1"	"182.0"	""	"829"	"53"	"36.000"	"29.000"	"0.000198392173267733"	"20"	"0"	"3.822E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ADILEDK"	"[R].aDILEDk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"Q62826"	"Heterogeneous nuclear ribonucleoprotein M OS=Rattus norvegicus OX=10116 GN=Hnrnpm PE=1 SV=4"	"0"	"2"	"2"	"0.0455"	"0.0000"	"1"	"1"	"1"	"631.37415"	"1261.74101"	"1261.74039"	"0.50"	"0.00031"	"6/56"	"6"	"56"	"903067.585144043"	"HCD"	"MS2"	"52.81568"	"64.5"	"100.000"	"74.2805"	"25176"	"25176"	"25158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.4"	""	"52.6"	""	"60.7"	""	"126.1"	""	"164.3"	"157.4"	""	"776"	"22"	"35.000"	"28.000"	"0.263531009455468"	"22"	"0.00329"	"0.03557"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDALNK"	"[K].qLDALnk.[N]"	"N-Term(TMT6plex); Q1(Deamidated); N6(Deamidated); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"3"	"631.37469"	"1261.74211"	"1261.74039"	"1.37"	"0.00086"	"4/60"	"4"	"60"	"364497.868225098"	"HCD"	"MS2"	"54.01188"	"32.8"	"100.000"	"76.6037"	"26119"	"26119"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"40.4"	""	"40.2"	""	"52.7"	""	"65.4"	"67.4"	""	"775"	"17"	"35.000"	"28.000"	"0.867504441195231"	"27"	"0.005266"	"0.06726"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSDVQK"	"[R].qVSDVQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"631.37769"	"1261.74809"	"1261.75162"	"-2.80"	"-0.00176"	"5/62"	"5"	"62"	"627065.67980957"	"HCD"	"MS2"	"100"	"57.8"	"100.000"	"34.9037"	"9198"	"9198"	"9184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.4"	""	"74.4"	""	"67.2"	""	"93.3"	""	"123.0"	"111.2"	""	"670"	"19"	"35.000"	"28.000"	"0.393590680904742"	"20"	"0.002588"	"0.02614"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGAALEK"	"[K].sQGAALEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"631.37854"	"1261.74980"	"1261.75162"	"-1.44"	"-0.00091"	"12/80"	"12"	"80"	"13785397.258667"	"HCD"	"MS2"	"7.981342"	"669.4"	"76.590"	"35.8808"	"9592"	"9592"	"9573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1197.8"	""	"853.3"	""	"927.9"	""	"1005.2"	"4.4"	"1124.7"	"1218.6"	""	"679"	"38"	"35.000"	"28.000"	"0.0052220350038288"	""	"0.0001991"	"0.00322"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSDVQK"	"[R].qVSDVQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"631.37866"	"1261.75005"	"1261.75162"	"-1.25"	"-0.00079"	"6/62"	"6"	"62"	"775732.880187988"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"34.8095"	"9197"	"9197"	"9179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.0"	""	"84.0"	""	"83.8"	""	"129.3"	"1.1"	"143.2"	"144.4"	""	"653"	"32"	"35.000"	"28.000"	"0.0190056700602189"	"20"	"0.0007633"	"0.007486"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLQTADK"	"[K].aGLQTADk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"631.37866"	"1261.75005"	"1261.75162"	"-1.25"	"-0.00079"	"7/68"	"7"	"68"	"1150855.8973999"	"HCD"	"MS2"	"0"	"109.7"	"100.000"	"37.3406"	"10183"	"10183"	"10162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.8"	""	"130.7"	""	"113.8"	""	"213.9"	"0.3"	"222.6"	"212.9"	""	"653"	"40"	"35.000"	"28.000"	"0.0029708668351443"	"21"	"0.0001686"	"0.001705"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSNNIK"	"[K].eVSNNIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"631.37866"	"1261.75005"	"1261.75162"	"-1.25"	"-0.00079"	"6/58"	"6"	"58"	"3326519.15820313"	"HCD"	"MS2"	"2.716341"	"282.5"	"100.000"	"37.0399"	"10060"	"10060"	"10036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"396.5"	""	"361.1"	""	"395.4"	""	"477.2"	""	"514.5"	"532.7"	""	"653"	"18"	"35.000"	"28.000"	"0.563486071734801"	"18"	"0.004234"	"0.05002"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSNNIK"	"[K].eVSNNIk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"631.37891"	"1261.75054"	"1261.75162"	"-0.86"	"-0.00054"	"6/58"	"6"	"58"	"3315989.76843262"	"HCD"	"MS2"	"2.2932"	"265.2"	"100.000"	"36.9533"	"10062"	"10062"	"10042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"365.0"	""	"367.5"	""	"341.5"	""	"456.0"	""	"466.2"	"517.0"	""	"653"	"18"	"35.000"	"28.000"	"0.541855125278363"	"19"	"0.004275"	"0.05037"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTNNLK"	"[K].nVTnNLk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"631.37909"	"1261.75090"	"1261.75162"	"-0.57"	"-0.00036"	"6/60"	"6"	"60"	"1650855.5980835"	"HCD"	"MS2"	"0"	"161.0"	"100.000"	"41.2977"	"11818"	"11818"	"11798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.7"	""	"182.5"	""	"181.1"	""	"294.2"	"4.2"	"318.1"	"304.6"	""	"647"	"33"	"35.000"	"28.000"	"0.0157715466548446"	"22"	"0.001615"	"0.01355"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPSTGGVK"	"[K].sAPSTGGVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"631.37921"	"1261.75115"	"1261.75162"	"-0.38"	"-0.00024"	"8/72"	"8"	"72"	"608175.254150391"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"31.1135"	"7667"	"7667"	"7636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.9"	""	"47.7"	""	"60.1"	""	"82.9"	""	"95.3"	"103.1"	""	"647"	"44"	"35.000"	"28.000"	"0.00133928894804183"	""	"9.9E-05"	"0.0006184"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAPSTGGVK"	"[K].sAPSTGGVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"P84245"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"631.37946"	"1261.75163"	"1261.75162"	"0.01"	"0.00001"	"7/72"	"7"	"72"	"420141.176269531"	"HCD"	"MS2"	"100"	"35.4"	"100.000"	"30.9705"	"7647"	"7647"	"7622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"32.4"	""	"48.2"	""	"62.0"	""	"85.4"	"78.9"	""	"657"	"21"	"35.000"	"28.000"	"0.281536932158176"	"22"	"0.001951"	"0.01643"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVTNNLK"	"[K].nVTnNLk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"631.37952"	"1261.75176"	"1261.75162"	"0.11"	"0.00007"	"5/60"	"5"	"60"	"1604446.14990234"	"HCD"	"MS2"	"0"	"169.7"	"100.000"	"41.4463"	"11845"	"11845"	"11818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.5"	""	"201.4"	""	"181.3"	""	"292.4"	"0.8"	"341.2"	"330.9"	""	"645"	"28"	"35.000"	"28.000"	"0.055915178927571"	"18"	"0.002286"	"0.02186"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGAALEK"	"[K].sQGAALEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"631.37952"	"1261.75176"	"1261.75162"	"0.11"	"0.00007"	"12/80"	"12"	"80"	"13042250.8382568"	"HCD"	"MS2"	"10.20222"	"853.5"	"100.000"	"35.7410"	"9572"	"9572"	"9555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1497.6"	""	"1071.9"	""	"1178.6"	""	"1304.5"	"10.7"	"1441.0"	"1571.6"	""	"645"	"38"	"35.000"	"28.000"	"0.00499493359599275"	""	"0.0001991"	"0.00252"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLQTADK"	"[K].aGLQTADk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"Q4KLH5"	"Arf-GAP domain and FG repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Agfg1 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"631.37964"	"1261.75200"	"1261.75162"	"0.30"	"0.00019"	"7/68"	"7"	"68"	"2014176.43151855"	"HCD"	"MS2"	"0"	"173.7"	"100.000"	"37.2813"	"10196"	"10196"	"10169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.8"	""	"221.6"	""	"203.4"	""	"329.7"	"10.9"	"312.3"	"300.8"	""	"645"	"29"	"35.000"	"28.000"	"0.0424160008381997"	"26"	"0.0001991"	"0.003722"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDEVIK"	"[K].sIDEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"631.39221"	"1261.77715"	"1261.77677"	"0.30"	"0.00019"	"6/54"	"6"	"54"	"1681678.73205566"	"HCD"	"MS2"	"25.98284"	"92.8"	"100.000"	"73.4498"	"24867"	"24867"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.6"	""	"51.1"	""	"106.6"	""	"258.4"	""	"181.6"	"182.2"	""	"520"	"18"	"34.000"	"27.000"	"0.37929170767159"	"22"	"0.002328"	"0.02217"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIDEVIK"	"[K].sIDEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"P13601"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"631.39240"	"1261.77751"	"1261.77677"	"0.59"	"0.00037"	"6/54"	"6"	"54"	"1566958.01342773"	"HCD"	"MS2"	"21.64062"	"93.3"	"100.000"	"73.3472"	"24796"	"24796"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.7"	""	"52.5"	""	"112.0"	""	"255.8"	""	"171.0"	"176.7"	""	"520"	"21"	"34.000"	"27.000"	"0.221806029644573"	"22"	"0.002035"	"0.01823"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADELPYLR"	"[K].gADELPYLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"Q9JJH5"	"6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 OS=Rattus norvegicus OX=10116 GN=Pfkfb2 PE=1 SV=1"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"631.85083"	"1262.69438"	"1262.69422"	"0.13"	"0.00008"	"7/66"	"7"	"66"	"466676.975341797"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"77.0831"	"26311"	"26311"	"26296"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.2"	""	"34.8"	""	"44.4"	""	"54.3"	""	"58.3"	"56.1"	""	"858"	"21"	"36.000"	"29.000"	"0.307933750955414"	"29"	"0.0009352"	"0.008388"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DADDLQK"	"[R].dADDLQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"631.85315"	"1262.69902"	"1262.69925"	"-0.18"	"-0.00012"	"6/56"	"6"	"56"	"4636625.07220459"	"HCD"	"MS2"	"34.26275"	"412.0"	"100.000"	"40.5708"	"11528"	"11528"	"11509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"382.6"	""	"332.5"	""	"400.5"	""	"610.9"	""	"1389.7"	"825.8"	""	"872"	"25"	"36.000"	"29.000"	"0.140762343706671"	"28"	"0.004959"	"0.06251"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSNAIMR"	"[K].iTQSNAIMR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"631.85754"	"1262.70781"	"1262.70882"	"-0.80"	"-0.00051"	"7/80"	"7"	"80"	"1576674.46105957"	"HCD"	"MS2"	"0"	"101.7"	"100.000"	"45.9355"	"13708"	"13708"	"13685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.2"	""	"128.8"	""	"150.0"	""	"140.3"	"0.8"	"192.5"	"187.9"	""	"787"	"42"	"35.000"	"28.000"	"0.00245439657762332"	"25"	"9.9E-05"	"0.000441"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSNAIMR"	"[K].iTQSNAIMR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"631.85785"	"1262.70842"	"1262.70882"	"-0.32"	"-0.00020"	"7/80"	"7"	"80"	"2181906.18658447"	"HCD"	"MS2"	"13.00397"	"127.2"	"100.000"	"46.2151"	"13788"	"13788"	"13761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.0"	""	"173.0"	""	"189.3"	""	"164.4"	""	"243.8"	"231.4"	""	"779"	"43"	"35.000"	"28.000"	"0.00211109346811432"	"24"	"0"	"0.0003508"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQEGAK"	"[K].sGQQEGAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"631.85852"	"1262.70976"	"1262.71049"	"-0.57"	"-0.00036"	"7/74"	"7"	"74"	"3298505.55657959"	"HCD"	"MS2"	"0"	"260.6"	"100.000"	"20.5303"	"3523"	"3523"	"3505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"427.0"	"2.2"	"327.6"	""	"359.4"	""	"420.0"	""	"452.1"	"482.3"	""	"804"	"30"	"36.000"	"29.000"	"0.0382143127049825"	"25"	"0.0001991"	"0.003351"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQEGAK"	"[K].sGQQEGAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"P11884"	"Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"631.85852"	"1262.70976"	"1262.71049"	"-0.57"	"-0.00036"	"7/74"	"7"	"74"	"4325337.49993896"	"HCD"	"MS2"	"0"	"326.9"	"100.000"	"20.5771"	"3504"	"3504"	"3484"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"551.8"	""	"399.6"	""	"431.2"	""	"484.1"	""	"591.9"	"638.5"	""	"804"	"39"	"36.000"	"29.000"	"0.00514311284271325"	"26"	"0.0001991"	"0.003831"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"631.86926"	"1262.73125"	"1262.73564"	"-3.48"	"-0.00219"	"12/56"	"12"	"56"	"13347340.4343872"	"HCD"	"MS2"	"16.87971"	"953.2"	"100.000"	"37.4164"	"10214"	"10214"	"10187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1821.8"	""	"1406.2"	""	"1082.0"	""	"1484.1"	""	"1701.6"	"1522.3"	""	"773"	"35"	"35.000"	"28.000"	"0.0121380661018316"	""	"0.004213"	"0.0468"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"631.87036"	"1262.73345"	"1262.73564"	"-1.74"	"-0.00110"	"6/56"	"6"	"56"	"7068120.69824219"	"HCD"	"MS2"	"0"	"564.1"	"100.000"	"37.3043"	"10205"	"10205"	"10185"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1048.5"	""	"784.4"	""	"666.9"	""	"892.5"	""	"1006.2"	"942.9"	""	"792"	"32"	"35.000"	"28.000"	"0.0262842255879156"	""	"0.002875"	"0.03124"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDNVK"	"[R].sEIDNVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"631.87073"	"1262.73418"	"1262.73564"	"-1.16"	"-0.00073"	"6/58"	"6"	"58"	"2013654.67694092"	"HCD"	"MS2"	"0"	"171.1"	"100.000"	"42.7341"	"12369"	"12369"	"12346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.8"	""	"154.9"	""	"163.3"	""	"315.6"	""	"507.5"	"243.4"	""	"753"	"25"	"35.000"	"28.000"	"0.10808488891323"	"24"	"0.00296"	"0.03165"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"631.87085"	"1262.73442"	"1262.73564"	"-0.96"	"-0.00061"	"6/56"	"6"	"56"	"1471648.39910889"	"HCD"	"MS2"	"9.2817"	"121.6"	"100.000"	"39.9355"	"11235"	"11235"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.3"	""	"153.0"	""	"156.3"	""	"189.6"	"0.6"	"231.3"	"228.2"	""	"753"	"21"	"35.000"	"28.000"	"0.269627993945158"	""	"0.004959"	"0.06178"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"631.87085"	"1262.73442"	"1262.73564"	"-0.96"	"-0.00061"	"6/56"	"6"	"56"	"1701284.63531494"	"HCD"	"MS2"	"13.24309"	"132.1"	"100.000"	"39.6540"	"11156"	"11156"	"11141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.2"	""	"147.8"	""	"170.2"	""	"224.5"	"0.1"	"246.3"	"251.8"	""	"753"	"12"	"35.000"	"28.000"	"2.47608175764316"	"20"	"0.008485"	"0.1079"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"631.87103"	"1262.73479"	"1262.73564"	"-0.67"	"-0.00042"	"12/56"	"12"	"56"	"1562146.35491943"	"HCD"	"MS2"	"0"	"149.3"	"100.000"	"38.9233"	"10828"	"10828"	"10797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.6"	""	"200.5"	""	"187.7"	""	"216.9"	"0.2"	"283.9"	"279.1"	""	"753"	"36"	"35.000"	"28.000"	"0.0102509704249133"	""	"0.001348"	"0.01102"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.4800"	"0.0000"	"1"	"1"	"1"	"421.58313"	"1262.73484"	"1262.73564"	"-0.63"	"-0.00027"	"5/56"	"5"	"56"	"21530469.2808228"	"HCD"	"MS2"	"6.132738"	"1087.2"	"100.000"	"37.5060"	"10250"	"10250"	"10233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1993.7"	""	"1548.2"	""	"1312.9"	""	"1694.4"	""	"1958.2"	"1778.5"	""	"753"	"25"	"35.000"	"28.000"	"0.124958263268558"	"27"	"0.008135"	"0.1043"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDNVK"	"[R].sEIDNVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"Q6P6Q2"	"Keratin, type II cytoskeletal 5 OS=Rattus norvegicus OX=10116 GN=Krt5 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"631.87109"	"1262.73491"	"1262.73564"	"-0.58"	"-0.00036"	"12/58"	"12"	"58"	"2505902.97357178"	"HCD"	"MS2"	"3.127891"	"208.8"	"100.000"	"42.5454"	"12326"	"12326"	"12303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.3"	""	"184.7"	""	"205.4"	""	"364.6"	"3.0"	"627.8"	"299.1"	""	"753"	"31"	"35.000"	"28.000"	"0.0275908436726797"	"24"	"0.002166"	"0.01977"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPSGLSK"	"[K].tDPSGLSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"631.87109"	"1262.73491"	"1262.73564"	"-0.58"	"-0.00036"	"5/68"	"5"	"68"	"3095953.06573486"	"HCD"	"MS2"	"9.23741"	"207.8"	"100.000"	"42.1754"	"12141"	"12141"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"310.8"	""	"277.0"	""	"290.0"	""	"323.4"	"6.1"	"363.1"	"397.4"	""	"753"	"33"	"35.000"	"28.000"	"0.0201727441553773"	""	"0.0001991"	"0.003153"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"631.87122"	"1262.73516"	"1262.73564"	"-0.38"	"-0.00024"	"12/56"	"12"	"56"	"7380210.01330566"	"HCD"	"MS2"	"0"	"591.3"	"100.000"	"38.2131"	"10537"	"10537"	"10518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"999.8"	""	"809.0"	""	"742.1"	""	"811.0"	"24.7"	"1140.5"	"1075.8"	""	"753"	"35"	"35.000"	"28.000"	"0.012994661785995"	""	"0.002189"	"0.02011"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"631.87128"	"1262.73528"	"1262.73564"	"-0.29"	"-0.00018"	"6/56"	"6"	"56"	"3562987.21942139"	"HCD"	"MS2"	"3.462379"	"286.6"	"100.000"	"38.3973"	"10648"	"10648"	"10628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"456.6"	""	"476.3"	""	"340.4"	""	"376.5"	"2.8"	"560.5"	"502.4"	""	"753"	"32"	"35.000"	"28.000"	"0.0266541587820628"	""	"0.002525"	"0.02471"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"631.87128"	"1262.73528"	"1262.73564"	"-0.29"	"-0.00018"	"12/56"	"12"	"56"	"48554562.8256836"	"HCD"	"MS2"	"0"	"558.4"	"15.360"	"37.8868"	"10440"	"10440"	"10426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"959.6"	""	"731.3"	""	"724.1"	""	"779.7"	"2.1"	"1082.5"	"1010.0"	""	"753"	"35"	"35.000"	"28.000"	"0.0117696888172217"	""	"0.00455"	"0.05325"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"631.87134"	"1262.73540"	"1262.73564"	"-0.19"	"-0.00012"	"12/56"	"12"	"56"	"3243631.51300049"	"HCD"	"MS2"	"5.511678"	"249.5"	"100.000"	"38.5212"	"10663"	"10663"	"10642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"408.7"	""	"422.9"	"2.1"	"287.0"	""	"329.3"	""	"478.5"	"435.9"	""	"753"	"33"	"35.000"	"28.000"	"0.0197135564374535"	"28"	"0.002419"	"0.02281"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"1"	"421.58337"	"1262.73557"	"1262.73564"	"-0.05"	"-0.00002"	"5/56"	"5"	"56"	"19880867.671936"	"HCD"	"MS2"	"7.858617"	"881.2"	"100.000"	"37.4056"	"10246"	"10246"	"10229"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1635.2"	""	"1260.4"	""	"1067.1"	""	"1335.5"	"0.0"	"1617.3"	"1421.9"	""	"722"	"28"	"35.000"	"28.000"	"0.059361819208059"	""	"0.007872"	"0.1003"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEDQLK"	"[K].aTEDQLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"631.87158"	"1262.73589"	"1262.73564"	"0.20"	"0.00012"	"6/56"	"6"	"56"	"2001218.19073486"	"HCD"	"MS2"	"0"	"182.6"	"100.000"	"38.7463"	"10791"	"10791"	"10770"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.4"	""	"242.2"	""	"228.7"	""	"254.4"	""	"360.9"	"340.3"	""	"705"	"34"	"35.000"	"28.000"	"0.013650831983487"	""	"0.001718"	"0.01523"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDPSGLSK"	"[K].tDPSGLSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"631.87170"	"1262.73613"	"1262.73564"	"0.39"	"0.00025"	"6/68"	"6"	"68"	"3726754.30688477"	"HCD"	"MS2"	"9.053702"	"260.1"	"100.000"	"42.0003"	"12104"	"12104"	"12081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"382.0"	""	"338.2"	""	"360.8"	""	"410.1"	"4.9"	"466.5"	"501.6"	""	"705"	"28"	"35.000"	"28.000"	"0.0594509941449531"	""	"0.0001991"	"0.004937"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"631.88843"	"1262.76958"	"1262.77202"	"-1.94"	"-0.00122"	"10/62"	"10"	"62"	"6701191.07666016"	"HCD"	"MS2"	"2.570931"	"475.2"	"100.000"	"35.9410"	"9654"	"9654"	"9633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"626.2"	""	"595.8"	""	"580.9"	""	"781.4"	""	"962.8"	"968.6"	""	"583"	"26"	"34.000"	"27.000"	"0.0768490598968099"	"25"	"0.002525"	"0.02436"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"631.88885"	"1262.77043"	"1262.77202"	"-1.26"	"-0.00079"	"10/62"	"10"	"62"	"16081418.2337646"	"HCD"	"MS2"	"3.125172"	"346.1"	"57.466"	"35.4748"	"9465"	"9465"	"9450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.6"	""	"416.4"	""	"437.3"	""	"578.5"	""	"693.2"	"726.7"	""	"571"	"25"	"34.000"	"27.000"	"0.0848410652061207"	"25"	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLTSEK"	"[K].qVLTSEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"631.88904"	"1262.77080"	"1262.77202"	"-0.97"	"-0.00061"	"6/64"	"6"	"64"	"5557491.43829346"	"HCD"	"MS2"	"10.72211"	"405.9"	"100.000"	"41.7659"	"11974"	"11974"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"726.4"	""	"514.3"	""	"396.1"	""	"734.1"	""	"747.3"	"726.3"	""	"564"	"32"	"34.000"	"27.000"	"0.0176705109837599"	""	"0.002462"	"0.02301"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"421.59515"	"1262.77091"	"1262.77202"	"-0.88"	"-0.00037"	"9/62"	"9"	"62"	"9317413.230896"	"HCD"	"MS2"	"7.17133"	"296.4"	"70.544"	"35.4680"	"9424"	"9424"	"9406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"372.1"	""	"353.2"	""	"382.3"	""	"469.3"	""	"625.2"	"613.9"	""	"564"	"24"	"34.000"	"27.000"	"0.101215985569891"	"23"	"0.005832"	"0.07192"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"631.88910"	"1262.77092"	"1262.77202"	"-0.87"	"-0.00055"	"6/62"	"6"	"62"	"1055381.3729248"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"36.4287"	"9813"	"9813"	"9799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.1"	""	"126.0"	""	"117.1"	""	"169.2"	""	"173.3"	"195.6"	""	"564"	"32"	"34.000"	"27.000"	"0.0190655399060539"	"25"	"0.0001991"	"0.002417"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSESGAIK"	"[K].lSESGAIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"631.88922"	"1262.77117"	"1262.77202"	"-0.68"	"-0.00043"	"6/60"	"6"	"60"	"883509.135009766"	"HCD"	"MS2"	"31.44116"	"71.0"	"100.000"	"51.1062"	"15771"	"15771"	"15747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.0"	""	"80.9"	""	"105.0"	""	"108.9"	"0.1"	"128.1"	"140.6"	""	"558"	"30"	"34.000"	"27.000"	"0.0301720072412124"	""	"0.0001686"	"0.00128"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"631.88922"	"1262.77117"	"1262.77202"	"-0.68"	"-0.00043"	"12/62"	"12"	"62"	"9674088.61474609"	"HCD"	"MS2"	"9.492814"	"311.8"	"86.181"	"35.6333"	"9492"	"9492"	"9478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"390.5"	""	"371.1"	""	"378.8"	""	"523.3"	""	"646.4"	"657.3"	""	"558"	"25"	"34.000"	"27.000"	"0.0900749859957825"	"24"	"0.0005161"	"0.006822"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLTSEK"	"[K].qVLTSEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"631.88934"	"1262.77141"	"1262.77202"	"-0.49"	"-0.00031"	"6/64"	"6"	"64"	"6498408.6583252"	"HCD"	"MS2"	"10.02765"	"480.7"	"100.000"	"41.6055"	"11943"	"11943"	"11925"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"850.4"	""	"607.4"	""	"476.5"	""	"848.6"	""	"890.2"	"886.0"	""	"558"	"32"	"34.000"	"27.000"	"0.0174423181284416"	""	"0.001951"	"0.01649"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"421.59534"	"1262.77146"	"1262.77202"	"-0.45"	"-0.00019"	"6/62"	"6"	"62"	"10383674.3017578"	"HCD"	"MS2"	"4.883515"	"455.1"	"100.000"	"35.3142"	"9400"	"9400"	"9390"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"552.1"	""	"551.8"	""	"588.8"	""	"751.0"	""	"944.9"	"933.2"	""	"558"	"29"	"34.000"	"27.000"	"0.0358594978124268"	"23"	"0.001951"	"0.0168"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"421.59534"	"1262.77146"	"1262.77202"	"-0.45"	"-0.00019"	"9/62"	"9"	"62"	"11495428.5905762"	"HCD"	"MS2"	"23.96449"	"524.7"	"100.000"	"35.1722"	"9305"	"9305"	"9285"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"684.9"	""	"635.7"	""	"642.3"	""	"883.7"	""	"1074.4"	"1068.0"	""	"558"	"23"	"34.000"	"27.000"	"0.139188772001343"	"22"	"0.004998"	"0.0634"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"631.88940"	"1262.77153"	"1262.77202"	"-0.39"	"-0.00025"	"6/62"	"6"	"62"	"177493135.913086"	"HCD"	"MS2"	"0"	"666.1"	"6.022"	"35.1903"	"9350"	"9350"	"9337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"877.6"	""	"806.8"	""	"840.4"	""	"1105.8"	""	"1345.6"	"1345.7"	""	"558"	"31"	"34.000"	"27.000"	"0.0226258135141221"	"24"	"0.002373"	"0.02255"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"421.59537"	"1262.77155"	"1262.77202"	"-0.38"	"-0.00016"	"9/62"	"9"	"62"	"10795513.3632202"	"HCD"	"MS2"	"24.42012"	"487.5"	"100.000"	"35.0273"	"9284"	"9284"	"9275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"612.8"	""	"592.8"	""	"620.1"	""	"830.0"	""	"1002.7"	"970.0"	""	"558"	"22"	"34.000"	"27.000"	"0.195706028259172"	"21"	"0.003984"	"0.04376"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASIDSK"	"[R].aLASIDSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"631.88953"	"1262.77178"	"1262.77202"	"-0.20"	"-0.00012"	"7/62"	"7"	"62"	"3616394.43670654"	"HCD"	"MS2"	"8.6471"	"245.7"	"100.000"	"59.4882"	"19207"	"19207"	"19197"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.8"	""	"318.9"	""	"342.9"	""	"400.6"	""	"443.6"	"474.7"	""	"558"	"42"	"34.000"	"27.000"	"0.00186039088610601"	"21"	"9.9E-05"	"0.0006539"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"631.88959"	"1262.77190"	"1262.77202"	"-0.10"	"-0.00006"	"10/62"	"10"	"62"	"167895452.402344"	"HCD"	"MS2"	"0.1177213"	"756.0"	"7.327"	"35.3327"	"9370"	"9370"	"9358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"965.4"	""	"878.6"	""	"952.1"	""	"1236.8"	""	"1560.8"	"1590.5"	""	"556"	"23"	"34.000"	"27.000"	"0.131233525471278"	"24"	"0.002834"	"0.02989"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"631.88965"	"1262.77202"	"1262.77202"	"0.00"	"0.00000"	"6/62"	"6"	"62"	"1089192.62841797"	"HCD"	"MS2"	"14.32804"	"90.2"	"100.000"	"36.2274"	"9770"	"9770"	"9754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.8"	""	"103.3"	""	"112.7"	""	"160.0"	""	"179.8"	"179.3"	""	"547"	"31"	"34.000"	"27.000"	"0.0229592306313055"	"25"	"0.0009352"	"0.007956"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"631.88971"	"1262.77214"	"1262.77202"	"0.09"	"0.00006"	"10/62"	"10"	"62"	"7186239.4642334"	"HCD"	"MS2"	"0"	"452.5"	"100.000"	"34.9012"	"9234"	"9234"	"9210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"629.2"	""	"587.5"	""	"558.5"	""	"789.9"	""	"900.5"	"832.8"	""	"484"	"23"	"33.000"	"26.000"	"0.120175341790981"	"23"	"0.0007053"	"0.007236"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDK"	"[K].iTITNDk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"631.88977"	"1262.77226"	"1262.77202"	"0.19"	"0.00012"	"6/60"	"6"	"60"	"1680884.38470459"	"HCD"	"MS2"	"27.23622"	"132.8"	"100.000"	"55.4796"	"17549"	"17549"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.9"	""	"155.1"	""	"166.2"	""	"215.5"	"0.9"	"244.7"	"274.8"	""	"484"	"34"	"33.000"	"26.000"	"0.00909526518378035"	""	"0.001316"	"0.01037"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"631.88983"	"1262.77239"	"1262.77202"	"0.29"	"0.00018"	"12/62"	"12"	"62"	"1161888.91418457"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"36.3645"	"9788"	"9788"	"9769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.9"	""	"127.8"	""	"134.4"	""	"159.7"	""	"185.7"	"191.7"	""	"484"	"24"	"33.000"	"26.000"	"0.0894984195068244"	"24"	"0.0001991"	"0.002178"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALASIDSK"	"[R].aLASIDSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"631.88983"	"1262.77239"	"1262.77202"	"0.29"	"0.00018"	"7/62"	"7"	"62"	"3805273.17999268"	"HCD"	"MS2"	"9.035542"	"266.9"	"100.000"	"59.6634"	"19245"	"19245"	"19232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"377.7"	""	"348.7"	""	"354.7"	""	"440.9"	""	"487.0"	"522.5"	""	"484"	"43"	"33.000"	"26.000"	"0.00111638853043612"	"22"	"0.0001686"	"0.001315"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"631.89001"	"1262.77275"	"1262.77202"	"0.58"	"0.00036"	"6/62"	"6"	"62"	"11239940.234314"	"HCD"	"MS2"	"0"	"723.0"	"100.000"	"35.0435"	"9253"	"9253"	"9237"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"978.0"	""	"947.1"	""	"901.9"	""	"1276.9"	""	"1396.3"	"1358.0"	""	"484"	"28"	"33.000"	"26.000"	"0.038002779864872"	"23"	"0.0001991"	"0.004744"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSSPVVK"	"[K].tSSSPVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"631.89087"	"1262.77446"	"1262.77202"	"1.93"	"0.00122"	"10/62"	"10"	"62"	"6020833.42773438"	"HCD"	"MS2"	"4.53579"	"431.9"	"100.000"	"36.0622"	"9666"	"9666"	"9646"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"540.6"	""	"516.0"	""	"554.3"	""	"705.2"	""	"877.7"	"917.1"	""	"483"	"26"	"33.000"	"26.000"	"0.0641087243217092"	"25"	"0.002035"	"0.01793"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDMLITGGR"	"[R].gDDMLITGGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"632.33063"	"1263.65398"	"1263.65645"	"-1.96"	"-0.00124"	"7/82"	"7"	"82"	"595812.22265625"	"HCD"	"MS2"	"100"	"47.1"	"100.000"	"56.4022"	"17953"	"17953"	"17932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.8"	""	"57.2"	""	"66.1"	""	"64.6"	"1.3"	"113.7"	"82.7"	""	"697"	"11"	"35.000"	"28.000"	"2.95939395550155"	"20"	"0.001453"	"0.01173"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPTSGALDR"	"[R].sMPTSGALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"632.33136"	"1263.65544"	"1263.65645"	"-0.80"	"-0.00050"	"8/88"	"8"	"88"	"2512089.62768555"	"HCD"	"MS2"	"31.28116"	"174.0"	"100.000"	"42.1061"	"12147"	"12147"	"12129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"248.3"	""	"237.2"	""	"227.2"	""	"259.5"	"4.1"	"318.1"	"355.2"	""	"707"	"21"	"35.000"	"28.000"	"0.286674733951333"	"15"	"0.0001686"	"0.001047"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPTSGALDR"	"[R].sMPTSGALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"632.33173"	"1263.65618"	"1263.65645"	"-0.22"	"-0.00014"	"12/88"	"12"	"88"	"2276776.2142334"	"HCD"	"MS2"	"32.58693"	"151.6"	"100.000"	"42.2560"	"12174"	"12174"	"12152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.1"	""	"199.7"	""	"203.4"	""	"216.9"	""	"287.7"	"297.8"	""	"707"	"18"	"35.000"	"28.000"	"0.59619649447492"	"15"	"0.003818"	"0.04139"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGDSVVTGR"	"[K].fPGDSVVTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"632.34802"	"1263.68877"	"1263.68947"	"-0.55"	"-0.00035"	"8/80"	"8"	"80"	"1772223.31726074"	"HCD"	"MS2"	"8.227507"	"80.9"	"100.000"	"66.0036"	"21852"	"21852"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.5"	""	"107.3"	""	"111.6"	""	"124.1"	"0.2"	"158.8"	"172.5"	""	"778"	"26"	"35.000"	"28.000"	"0.098843838245868"	"20"	"0.0007633"	"0.007468"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTEDK"	"[K].eALTEDk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"632.36273"	"1263.71819"	"1263.71965"	"-1.16"	"-0.00073"	"6/58"	"6"	"58"	"1732192.51708984"	"HCD"	"MS2"	"15.67675"	"170.8"	"100.000"	"41.4070"	"11829"	"11829"	"11802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.4"	""	"194.8"	""	"196.6"	""	"305.8"	"3.4"	"361.2"	"359.5"	""	"791"	"18"	"35.000"	"28.000"	"0.651848225848339"	"23"	"0.004073"	"0.04405"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"421.91605"	"1263.73359"	"1263.73491"	"-1.05"	"-0.00044"	"5/56"	"5"	"56"	"1502586.62872314"	"HCD"	"MS2"	"65.49652"	"54.0"	"100.000"	"72.5599"	"24505"	"24505"	"24478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"69.5"	""	"66.6"	""	"91.1"	""	"106.1"	"109.9"	""	"744"	"15"	"35.000"	"28.000"	"1.06547420480525"	"13"	"0.00329"	"0.03564"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"632.37122"	"1263.73516"	"1263.73491"	"0.19"	"0.00012"	"6/56"	"6"	"56"	"4708769.0324707"	"HCD"	"MS2"	"2.459421"	"318.1"	"100.000"	"72.9958"	"24682"	"24682"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"483.4"	""	"401.7"	""	"414.0"	""	"503.0"	""	"580.8"	"634.6"	""	"737"	"24"	"35.000"	"28.000"	"0.158284173262861"	"21"	"0.002189"	"0.02045"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"632.37128"	"1263.73528"	"1263.73491"	"0.29"	"0.00018"	"4/56"	"4"	"56"	"1569014.578125"	"HCD"	"MS2"	"24.32691"	"126.1"	"100.000"	"72.2687"	"24357"	"24357"	"24336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.3"	""	"176.3"	""	"145.7"	""	"230.5"	""	"225.0"	"243.7"	""	"737"	"20"	"35.000"	"28.000"	"0.33996757090653"	"20"	"0.003786"	"0.04061"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"632.37128"	"1263.73528"	"1263.73491"	"0.29"	"0.00018"	"5/56"	"5"	"56"	"5507846.02630615"	"HCD"	"MS2"	"2.3099"	"379.3"	"100.000"	"72.8724"	"24603"	"24603"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"586.9"	""	"467.7"	"3.4"	"489.9"	""	"580.2"	""	"708.0"	"761.3"	""	"737"	"20"	"35.000"	"28.000"	"0.348688393963295"	"19"	"0.003043"	"0.03274"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"632.37140"	"1263.73552"	"1263.73491"	"0.48"	"0.00031"	"4/56"	"4"	"56"	"9278571.01263428"	"HCD"	"MS2"	"0"	"616.5"	"100.000"	"72.5726"	"24481"	"24481"	"24464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"975.9"	""	"775.8"	""	"818.7"	""	"1022.0"	""	"1069.9"	"1180.3"	""	"744"	"21"	"35.000"	"28.000"	"0.288099788782537"	"21"	"0.003568"	"0.03942"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"632.37183"	"1263.73638"	"1263.73491"	"1.16"	"0.00073"	"9/56"	"9"	"56"	"2058284.49157715"	"HCD"	"MS2"	"21.33605"	"147.8"	"100.000"	"72.3928"	"24437"	"24437"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.1"	""	"213.3"	""	"192.3"	""	"237.0"	"0.7"	"254.5"	"269.1"	""	"722"	"23"	"35.000"	"28.000"	"0.173583004790352"	"19"	"0.004213"	"0.04704"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGIDPK"	"[K].eFGIDPk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"632.37183"	"1263.73638"	"1263.73491"	"1.16"	"0.00073"	"4/56"	"4"	"56"	"9958820.06976318"	"HCD"	"MS2"	"0"	"652.8"	"100.000"	"72.6821"	"24554"	"24554"	"24536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1036.4"	""	"856.8"	""	"835.9"	""	"1064.3"	""	"1108.9"	"1284.5"	""	"722"	"19"	"35.000"	"28.000"	"0.40598239560206"	"19"	"0.003984"	"0.04372"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGHLAVVAPR"	"[K].nGHLAVVAPR.[L]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"421.91705"	"1263.73661"	"1263.73709"	"-0.38"	"-0.00016"	"8/92"	"8"	"92"	"5361339.93041992"	"HCD"	"MS2"	"47.14916"	"165.9"	"100.000"	"40.9798"	"11694"	"11694"	"11679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.0"	""	"189.6"	""	"204.1"	""	"307.5"	"2.1"	"345.2"	"332.8"	""	"722"	"25"	"35.000"	"28.000"	"0.122041405870359"	"14"	"0.0001686"	"0.001183"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMADLK"	"[R].dLMADLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3429"	"0.0000"	"1"	"1"	"1"	"632.37244"	"1263.73760"	"1263.73828"	"-0.54"	"-0.00034"	"12/56"	"12"	"56"	"402810.734313965"	"HCD"	"MS2"	"19.972"	"31.3"	"100.000"	"95.4243"	"33745"	"33745"	"33724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.4"	""	"49.0"	""	"43.3"	""	"41.8"	""	"52.4"	"58.0"	""	"744"	"35"	"35.000"	"28.000"	"0.0106793037651318"	""	"0.0001991"	"0.002613"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"632.37244"	"1263.73760"	"1263.73828"	"-0.54"	"-0.00034"	"6/50"	"6"	"50"	"2730547.72454834"	"HCD"	"MS2"	"5.057733"	"214.2"	"100.000"	"79.2161"	"27175"	"27175"	"27160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"384.0"	""	"264.9"	""	"304.5"	""	"225.8"	""	"420.3"	"435.6"	""	"744"	"33"	"35.000"	"28.000"	"0.020490046306281"	"28"	"0.001718"	"0.01519"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMADLK"	"[R].dLMADLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"632.37250"	"1263.73772"	"1263.73828"	"-0.44"	"-0.00028"	"6/56"	"6"	"56"	"406135.784606934"	"HCD"	"MS2"	"17.54693"	"36.8"	"100.000"	"95.7313"	"33869"	"33869"	"33851"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.5"	""	"50.8"	""	"61.3"	""	"40.9"	"0.9"	"63.9"	"73.4"	""	"744"	"32"	"35.000"	"28.000"	"0.0244648715496216"	""	"0.0001991"	"0.003211"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"632.37250"	"1263.73772"	"1263.73828"	"-0.44"	"-0.00028"	"6/50"	"6"	"50"	"1134439.8626709"	"HCD"	"MS2"	"8.909472"	"92.5"	"100.000"	"79.6654"	"27385"	"27385"	"27366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.0"	""	"111.1"	""	"131.5"	""	"98.1"	""	"186.4"	"198.0"	""	"744"	"32"	"35.000"	"28.000"	"0.0223122280367049"	"28"	"0.0005778"	"0.00708"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"632.37250"	"1263.73772"	"1263.73828"	"-0.44"	"-0.00028"	"6/50"	"6"	"50"	"3002234.6161499"	"HCD"	"MS2"	"1.452107"	"224.9"	"100.000"	"79.3633"	"27262"	"27262"	"27244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"397.5"	""	"296.5"	""	"305.5"	""	"222.2"	""	"449.9"	"463.0"	""	"744"	"33"	"35.000"	"28.000"	"0.0201624331229404"	"28"	"0.00192"	"0.01613"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMADLK"	"[R].dLMADLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"632.37262"	"1263.73796"	"1263.73828"	"-0.25"	"-0.00016"	"12/56"	"12"	"56"	"296768.199707031"	"HCD"	"MS2"	"23.68424"	"26.1"	"100.000"	"95.7756"	"33854"	"33854"	"33839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"37.6"	""	"39.2"	""	"34.2"	""	"41.9"	"47.8"	""	"744"	"36"	"35.000"	"28.000"	"0.00934421752521563"	""	"0.0001991"	"0.002273"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAMLLk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"632.37280"	"1263.73833"	"1263.73828"	"0.04"	"0.00002"	"6/50"	"6"	"50"	"1683038.1427002"	"HCD"	"MS2"	"7.567917"	"129.1"	"100.000"	"79.5066"	"27293"	"27293"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.9"	""	"157.0"	""	"172.5"	""	"129.9"	""	"271.8"	"278.8"	""	"741"	"32"	"35.000"	"28.000"	"0.0217164189952448"	"28"	"0.001453"	"0.01182"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMADLK"	"[R].dLMADLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"632.37311"	"1263.73894"	"1263.73828"	"0.52"	"0.00033"	"6/56"	"6"	"56"	"548103.67401123"	"HCD"	"MS2"	"20.93579"	"45.4"	"100.000"	"95.4685"	"33730"	"33730"	"33711"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.4"	""	"67.8"	""	"65.2"	""	"62.9"	""	"76.1"	"81.0"	""	"739"	"34"	"35.000"	"28.000"	"0.0159446298887859"	""	"0.0001991"	"0.002502"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDK"	"[K].iTITnDk.[G]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"632.38080"	"1263.75432"	"1263.75604"	"-1.36"	"-0.00086"	"12/60"	"12"	"60"	"1701389.66375732"	"HCD"	"MS2"	"7.155263"	"120.8"	"100.000"	"61.9401"	"20200"	"20200"	"20177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.5"	""	"115.2"	""	"132.9"	""	"222.7"	""	"264.6"	"266.8"	""	"629"	"35"	"34.000"	"27.000"	"0.00976383990466369"	"26"	"0.000885"	"0.007768"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDK"	"[K].iTITnDk.[G]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"632.38147"	"1263.75566"	"1263.75604"	"-0.30"	"-0.00019"	"12/60"	"12"	"60"	"1710069.38995361"	"HCD"	"MS2"	"7.457098"	"124.8"	"100.000"	"61.9519"	"20171"	"20171"	"20151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.8"	""	"115.9"	""	"140.5"	""	"226.0"	""	"277.6"	"268.8"	""	"579"	"34"	"34.000"	"27.000"	"0.0126080687431972"	"26"	"0.001348"	"0.01056"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVASMMHR"	"[R].sTVASmMHR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"2"	"3"	"P15791; P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1;Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P15791; P11730; P08413"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1; Calcium/calmodulin-dependent protein kinase type II subunit beta OS=Rattus norvegicus OX=10116 GN=Camk2b PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"422.21545"	"1264.63181"	"1264.63394"	"-1.69"	"-0.00071"	"11/72"	"11"	"72"	"688039.420532227"	"HCD"	"MS2"	"46.71654"	"48.0"	"100.000"	"23.0487"	"4491"	"4491"	"4478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.7"	""	"54.3"	""	"56.4"	""	"94.6"	""	"98.0"	"85.8"	""	"522"	"32"	"34.000"	"27.000"	"0.0175242930613673"	"17"	"0.00452"	"0.05256"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDMR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"632.83264"	"1264.65801"	"1264.65909"	"-0.86"	"-0.00054"	"5/70"	"5"	"70"	"948421.468811035"	"HCD"	"MS2"	"5.682883"	"51.4"	"100.000"	"87.0100"	"30318"	"30318"	"30302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.8"	""	"73.1"	""	"68.8"	""	"60.8"	""	"103.7"	"108.0"	""	"672"	"30"	"35.000"	"28.000"	"0.0309983999524"	"20"	"0.0001991"	"0.004534"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDMR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"632.83282"	"1264.65837"	"1264.65909"	"-0.57"	"-0.00036"	"5/70"	"5"	"70"	"566784.590698242"	"HCD"	"MS2"	"31.71531"	"33.0"	"100.000"	"86.8406"	"30285"	"30285"	"30261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.5"	""	"46.3"	""	"48.8"	""	"39.4"	""	"65.6"	"63.9"	""	"670"	"32"	"35.000"	"28.000"	"0.022184252874009"	"25"	"0.0001991"	"0.002997"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDMR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.83295"	"1264.65862"	"1264.65909"	"-0.38"	"-0.00024"	"5/70"	"5"	"70"	"229119.183837891"	"HCD"	"MS2"	"15.62409"	"15.4"	"100.000"	"87.4635"	"30536"	"30536"	"30514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"19.8"	""	"24.2"	""	"15.9"	""	"31.5"	"34.1"	""	"668"	"5"	"35.000"	"28.000"	"9.94824487429351"	"13"	"0.009514"	"0.1269"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDMR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"632.83301"	"1264.65874"	"1264.65909"	"-0.28"	"-0.00018"	"5/70"	"5"	"70"	"640365.23236084"	"HCD"	"MS2"	"12.67913"	"37.5"	"100.000"	"87.3075"	"30438"	"30438"	"30418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"58.9"	""	"56.5"	""	"47.7"	""	"70.0"	"74.8"	""	"668"	"35"	"35.000"	"28.000"	"0.009971177947186"	"24"	"0.0001991"	"0.003008"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDMR.[R]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"632.83313"	"1264.65898"	"1264.65909"	"-0.09"	"-0.00006"	"6/70"	"6"	"70"	"1065636.98736572"	"HCD"	"MS2"	"5.662442"	"56.5"	"100.000"	"87.1432"	"30407"	"30407"	"30395"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	""	"68.9"	""	"76.8"	""	"65.7"	""	"125.0"	"114.8"	""	"679"	"46"	"35.000"	"28.000"	"0.000777749568114659"	"26"	"9.9E-05"	"0.0006345"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTMGDR.[F]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"632.84106"	"1264.67485"	"1264.67685"	"-1.58"	"-0.00100"	"8/78"	"8"	"78"	"1710486.67858887"	"HCD"	"MS2"	"17.06539"	"98.0"	"100.000"	"66.2413"	"21916"	"21916"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.5"	""	"127.9"	""	"132.0"	""	"132.9"	""	"202.2"	"210.9"	""	"761"	"42"	"35.000"	"28.000"	"0.00238426575507823"	"28"	"0"	"0.0001781"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTMGDR.[F]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"632.84137"	"1264.67546"	"1264.67685"	"-1.10"	"-0.00070"	"7/78"	"7"	"78"	"1729068.15338135"	"HCD"	"MS2"	"17.69255"	"100.0"	"100.000"	"66.2700"	"21961"	"21961"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.6"	""	"138.8"	""	"143.6"	""	"127.2"	""	"202.6"	"208.8"	""	"755"	"40"	"35.000"	"28.000"	"0.00402640035764422"	"27"	"0"	"0.0002414"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNDAEK"	"[R].mVNDAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"632.85138"	"1264.69548"	"1264.69714"	"-1.31"	"-0.00083"	"6/60"	"6"	"60"	"10021421.1862183"	"HCD"	"MS2"	"9.770248"	"702.2"	"83.136"	"38.2016"	"10568"	"10568"	"10551"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1182.1"	""	"909.0"	""	"988.3"	""	"850.4"	""	"1351.0"	"1391.4"	""	"818"	"28"	"36.000"	"29.000"	"0.0613371097720471"	"19"	"0.004392"	"0.05206"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVNDAEK"	"[R].mVNDAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"632.85187"	"1264.69646"	"1264.69714"	"-0.54"	"-0.00034"	"6/60"	"6"	"60"	"9858505.83654785"	"HCD"	"MS2"	"7.475753"	"789.3"	"100.000"	"38.2912"	"10569"	"10569"	"10550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1323.1"	""	"1040.6"	""	"1082.8"	""	"979.2"	""	"1529.6"	"1542.8"	""	"868"	"30"	"36.000"	"29.000"	"0.04791701210375"	"19"	"0.004392"	"0.05197"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.85791"	"1264.70854"	"1264.70987"	"-1.05"	"-0.00066"	"4/74"	"4"	"74"	"285887.750793457"	"HCD"	"MS2"	"41.5728"	"23.1"	"100.000"	"81.6479"	"28162"	"28162"	"28141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"29.5"	""	"33.1"	""	"40.4"	"1.7"	"43.8"	"42.2"	""	"833"	"13"	"36.000"	"29.000"	"2.24706174277551"	"14"	"0.00329"	"0.03519"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"632.85834"	"1264.70940"	"1264.70987"	"-0.37"	"-0.00023"	"5/74"	"5"	"74"	"893085.344055176"	"HCD"	"MS2"	"14.86672"	"47.5"	"100.000"	"81.1056"	"27970"	"27970"	"27951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.2"	""	"60.5"	""	"57.8"	""	"90.4"	""	"91.6"	"81.8"	""	"830"	"35"	"36.000"	"29.000"	"0.01291362279899"	""	"0.0001991"	"0.003527"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"632.85840"	"1264.70952"	"1264.70987"	"-0.27"	"-0.00017"	"5/74"	"5"	"74"	"1478581.93902588"	"HCD"	"MS2"	"1.592899"	"77.9"	"100.000"	"81.3824"	"28082"	"28082"	"28069"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.1"	""	"97.6"	""	"106.6"	""	"143.0"	""	"159.9"	"129.0"	""	"819"	"35"	"36.000"	"29.000"	"0.0120574065904059"	""	"0.0001686"	"0.001133"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"632.85858"	"1264.70989"	"1264.70987"	"0.01"	"0.00001"	"5/74"	"5"	"74"	"307935.422973633"	"HCD"	"MS2"	"33.56911"	"25.1"	"100.000"	"81.6867"	"28206"	"28206"	"28184"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.7"	""	"29.8"	""	"35.3"	""	"38.6"	""	"51.9"	"48.7"	""	"862"	"29"	"36.000"	"29.000"	"0.0599069584052955"	"21"	"0.0001991"	"0.005394"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"632.85858"	"1264.70989"	"1264.70987"	"0.01"	"0.00001"	"5/74"	"5"	"74"	"777820.575622559"	"HCD"	"MS2"	"6.032892"	"47.2"	"100.000"	"81.0278"	"27911"	"27911"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"64.6"	""	"67.6"	""	"83.3"	""	"86.8"	"77.6"	""	"862"	"35"	"36.000"	"29.000"	"0.0135980699267446"	""	"0.0001991"	"0.002341"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILIQYDR"	"[K].dILIQYDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"632.85870"	"1264.71013"	"1264.70987"	"0.21"	"0.00013"	"5/74"	"5"	"74"	"1515620.03210449"	"HCD"	"MS2"	"1.476147"	"73.4"	"100.000"	"81.3203"	"28030"	"28030"	"28014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.0"	""	"88.9"	""	"105.2"	""	"136.3"	""	"146.7"	"107.7"	""	"841"	"35"	"36.000"	"29.000"	"0.0118786202945205"	""	"0.0001686"	"0.00133"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISAAFEER"	"[K].iISAAFEER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"632.85901"	"1264.71074"	"1264.70987"	"0.69"	"0.00044"	"6/74"	"6"	"74"	"334751.376831055"	"HCD"	"MS2"	"28.20646"	"20.1"	"100.000"	"85.2981"	"29665"	"29665"	"29637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"23.5"	""	"23.9"	""	"37.7"	""	"43.7"	"37.5"	""	"845"	"29"	"36.000"	"29.000"	"0.0498685468562855"	"20"	"0.0001686"	"0.001251"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISAAFEER"	"[K].iISAAFEER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"632.85913"	"1264.71099"	"1264.70987"	"0.88"	"0.00056"	"7/74"	"7"	"74"	"304968.405700684"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"85.4624"	"29702"	"29702"	"29676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"24.5"	""	"25.3"	""	"32.0"	"1.0"	"34.6"	"40.6"	""	"840"	"27"	"36.000"	"29.000"	"0.0845764184942202"	"15"	"0.0001686"	"0.001688"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAESQPK"	"[K].fAESQPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"632.86884"	"1264.73039"	"1264.73016"	"0.19"	"0.00012"	"10/54"	"10"	"54"	"4013275.74407959"	"HCD"	"MS2"	"30.86654"	"301.7"	"100.000"	"40.8698"	"11650"	"11650"	"11624"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"385.4"	""	"369.1"	""	"359.4"	""	"590.5"	""	"592.0"	"570.2"	""	"746"	"24"	"35.000"	"28.000"	"0.147132573674079"	"23"	"0.004634"	"0.05461"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAESQPK"	"[K].fAESQPk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"632.86890"	"1264.73052"	"1264.73016"	"0.28"	"0.00018"	"10/54"	"10"	"54"	"3772685.31988525"	"HCD"	"MS2"	"33.93984"	"266.0"	"100.000"	"40.9837"	"11661"	"11661"	"11642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"333.5"	""	"301.7"	""	"315.1"	""	"541.1"	""	"546.7"	"491.5"	""	"746"	"23"	"35.000"	"28.000"	"0.191738282040245"	"22"	"0.00511"	"0.06564"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEWVADR"	"[K].nFEWVADR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"633.32678"	"1265.64629"	"1265.64760"	"-1.04"	"-0.00066"	"6/78"	"6"	"78"	"1166956.57275391"	"HCD"	"MS2"	"1.976742"	"67.5"	"100.000"	"82.0815"	"28338"	"28338"	"28327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.1"	""	"72.8"	""	"97.3"	""	"115.9"	""	"136.4"	"143.7"	""	"607"	"32"	"34.000"	"27.000"	"0.0202375854456334"	"20"	"9.9E-05"	"0.001012"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEWVADR"	"[K].nFEWVADR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"633.32715"	"1265.64702"	"1265.64760"	"-0.46"	"-0.00029"	"6/78"	"6"	"78"	"1131155.48803711"	"HCD"	"MS2"	"1.895452"	"64.5"	"100.000"	"82.1989"	"28414"	"28414"	"28398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.3"	""	"67.8"	""	"85.7"	""	"109.9"	""	"134.8"	"144.1"	""	"654"	"31"	"35.000"	"28.000"	"0.0242967258092221"	"20"	"0.0001686"	"0.001637"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAFVGTWK"	"[M].aDAFVGTWk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P07483"	"Fatty acid-binding protein, heart OS=Rattus norvegicus OX=10116 GN=Fabp3 PE=1 SV=2"	"P07483"	"Fatty acid-binding protein, heart OS=Rattus norvegicus OX=10116 GN=Fabp3 PE=1 SV=2"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"633.34021"	"1265.67314"	"1265.67275"	"0.31"	"0.00019"	"5/74"	"5"	"74"	"902043.319702148"	"HCD"	"MS2"	"5.823126"	"41.5"	"100.000"	"112.7080"	"40608"	"40608"	"40585"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.6"	""	"68.3"	""	"87.5"	""	"45.2"	""	"59.6"	"56.3"	""	"802"	"43"	"36.000"	"29.000"	"0.00215349750344471"	""	"0.0001686"	"0.001264"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAFVGTWK"	"[M].aDAFVGTWk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P07483"	"Fatty acid-binding protein, heart OS=Rattus norvegicus OX=10116 GN=Fabp3 PE=1 SV=2"	"P07483"	"Fatty acid-binding protein, heart OS=Rattus norvegicus OX=10116 GN=Fabp3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"633.34070"	"1265.67412"	"1265.67275"	"1.08"	"0.00068"	"8/74"	"8"	"74"	"504171.784729004"	"HCD"	"MS2"	"20.39451"	"27.5"	"100.000"	"112.7448"	"40637"	"40637"	"40607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"35.9"	""	"42.4"	""	"44.6"	""	"58.0"	"47.7"	""	"790"	"26"	"35.000"	"28.000"	"0.0943185456750705"	"27"	"0.000264"	"0.006089"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEMTLK"	"[K].eGEMTLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"633.36212"	"1265.71697"	"1265.71754"	"-0.46"	"-0.00029"	"6/56"	"6"	"56"	"3288950.84594727"	"HCD"	"MS2"	"4.119499"	"284.8"	"100.000"	"51.6764"	"16032"	"16032"	"16015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"437.6"	""	"327.5"	""	"381.1"	""	"437.6"	""	"540.2"	"580.8"	""	"783"	"29"	"35.000"	"28.000"	"0.0468523918006786"	"20"	"0.002755"	"0.02919"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEMTLK"	"[K].eGEMTLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"633.36230"	"1265.71733"	"1265.71754"	"-0.17"	"-0.00011"	"6/56"	"6"	"56"	"1945379.14117432"	"HCD"	"MS2"	"21.03272"	"173.1"	"100.000"	"51.3874"	"15915"	"15915"	"15898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.9"	""	"192.8"	""	"228.9"	""	"267.6"	"4.5"	"348.0"	"351.0"	""	"785"	"19"	"35.000"	"28.000"	"0.52582309981468"	"19"	"0.003529"	"0.03871"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEMTLK"	"[K].eGEMTLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"633.36279"	"1265.71831"	"1265.71754"	"0.60"	"0.00038"	"6/56"	"6"	"56"	"2951310.50830078"	"HCD"	"MS2"	"5.37654"	"159.8"	"100.000"	"51.9777"	"16120"	"16120"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.4"	""	"194.0"	""	"227.4"	""	"239.8"	"1.9"	"303.8"	"315.6"	""	"778"	"29"	"35.000"	"28.000"	"0.0469839581856538"	"20"	"0.002673"	"0.02806"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIAAEK"	"[R].fEIAAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"633.37787"	"1265.74846"	"1265.75056"	"-1.66"	"-0.00105"	"6/56"	"6"	"56"	"533445.670043945"	"HCD"	"MS2"	"0"	"47.1"	"100.000"	"76.9892"	"26274"	"26274"	"26259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"59.2"	""	"70.4"	""	"79.0"	""	"94.4"	"88.3"	""	"513"	"33"	"34.000"	"27.000"	"0.0118055811123618"	"27"	"0.0001991"	"0.002418"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGETYPK"	"[K].lGETYPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"633.37854"	"1265.74980"	"1265.75056"	"-0.60"	"-0.00038"	"6/50"	"6"	"50"	"1298097.20428467"	"HCD"	"MS2"	"3.112954"	"110.0"	"100.000"	"54.1415"	"17037"	"17037"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.8"	""	"137.4"	""	"158.5"	""	"175.4"	""	"188.7"	"202.1"	""	"497"	"21"	"33.000"	"26.000"	"0.180853281427401"	"19"	"0.003043"	"0.03284"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGETYPK"	"[K].lGETYPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"633.37872"	"1265.75017"	"1265.75056"	"-0.31"	"-0.00019"	"6/50"	"6"	"50"	"834867.642944336"	"HCD"	"MS2"	"15.32522"	"78.5"	"100.000"	"54.3555"	"17091"	"17091"	"17069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.2"	""	"97.9"	""	"114.0"	""	"117.9"	""	"135.6"	"150.8"	""	"505"	"18"	"34.000"	"27.000"	"0.421950380113454"	"18"	"0.002588"	"0.02658"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGETYPK"	"[K].lGETYPk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.37939"	"1265.75151"	"1265.75056"	"0.75"	"0.00048"	"7/50"	"7"	"50"	"604607.256164551"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"54.7073"	"17234"	"17234"	"17216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.8"	""	"77.9"	""	"76.5"	""	"99.6"	""	"105.9"	"111.9"	""	"505"	"8"	"34.000"	"27.000"	"3.80418284212153"	"13"	"0.008926"	"0.1159"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIAAEK"	"[R].fEIAAEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"Q6AYN4"	"Phytanoyl-CoA hydroxylase-interacting protein-like OS=Rattus norvegicus OX=10116 GN=Phyhipl PE=1 SV=2"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"633.37970"	"1265.75212"	"1265.75056"	"1.24"	"0.00078"	"10/56"	"10"	"56"	"465407.508544922"	"HCD"	"MS2"	"37.34715"	"40.6"	"100.000"	"77.0585"	"26333"	"26333"	"26323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.9"	""	"50.8"	""	"55.6"	""	"74.5"	""	"77.9"	"77.9"	""	"503"	"28"	"34.000"	"27.000"	"0.0406947129467231"	"27"	"0.0001991"	"0.002713"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVDPLVPLR"	"[K].aGVDPLVPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.39172"	"1265.77617"	"1265.77789"	"-1.36"	"-0.00086"	"7/72"	"7"	"72"	"310343.905029297"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"89.4954"	"31357"	"31357"	"31338"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	""	"19.0"	""	"23.8"	""	"30.6"	""	"25.6"	"36.2"	""	"322"	"30"	"32.000"	"25.000"	"0.0166657888835374"	"14"	"9.9E-05"	"0.0005573"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVDPLVPLR"	"[K].aGVDPLVPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.39227"	"1265.77727"	"1265.77789"	"-0.49"	"-0.00031"	"7/72"	"7"	"72"	"417178.979553223"	"HCD"	"MS2"	"27.14179"	"21.2"	"100.000"	"89.6350"	"31373"	"31373"	"31352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"33.7"	""	"29.5"	""	"33.0"	""	"35.2"	"42.0"	""	"319"	"27"	"32.000"	"25.000"	"0.0316782139318501"	"14"	"0"	"0.0003081"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVDPLVPLR"	"[K].aGVDPLVPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"633.39227"	"1265.77727"	"1265.77789"	"-0.49"	"-0.00031"	"8/72"	"8"	"72"	"1088306.32055664"	"HCD"	"MS2"	"2.800219"	"46.6"	"100.000"	"89.7820"	"31472"	"31472"	"31460"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.6"	""	"56.9"	""	"69.9"	""	"74.4"	""	"83.4"	"91.8"	""	"319"	"44"	"32.000"	"25.000"	"0.000581782545346344"	"17"	"0"	"6.791E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVDPLVPLR"	"[K].aGVDPLVPLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"P81799"	"N-acetyl-D-glucosamine kinase OS=Rattus norvegicus OX=10116 GN=Nagk PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.39252"	"1265.77776"	"1265.77789"	"-0.10"	"-0.00007"	"7/72"	"7"	"72"	"1056573.76513672"	"HCD"	"MS2"	"8.915283"	"45.1"	"100.000"	"89.9353"	"31493"	"31493"	"31475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.9"	""	"59.5"	""	"59.4"	""	"72.1"	""	"86.7"	"92.4"	""	"323"	"31"	"32.000"	"25.000"	"0.0114596809526087"	"15"	"9.9E-05"	"0.0008769"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADNDWFR"	"[K].nADNDWFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"633.80634"	"1266.60539"	"1266.60647"	"-0.85"	"-0.00054"	"6/74"	"6"	"74"	"633035.547241211"	"HCD"	"MS2"	"15.30826"	"45.3"	"100.000"	"62.8922"	"20587"	"20587"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"50.8"	""	"70.9"	""	"72.4"	""	"86.4"	"86.1"	""	"416"	"20"	"33.000"	"26.000"	"0.187959090534238"	"18"	"0.0001991"	"0.003348"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADNDWFR"	"[K].nADNDWFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"633.80634"	"1266.60539"	"1266.60647"	"-0.85"	"-0.00054"	"5/74"	"5"	"74"	"873728.626098633"	"HCD"	"MS2"	"6.267528"	"58.2"	"100.000"	"62.5884"	"20464"	"20464"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"55.8"	""	"71.4"	""	"109.5"	"2.1"	"113.3"	"125.3"	""	"416"	"30"	"33.000"	"26.000"	"0.0208960084377906"	"23"	"0.0001991"	"0.00224"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADNDWFR"	"[K].nADNDWFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"633.80664"	"1266.60600"	"1266.60647"	"-0.36"	"-0.00023"	"7/74"	"7"	"74"	"794787.053344727"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"62.8916"	"20554"	"20554"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.4"	""	"56.6"	""	"68.1"	""	"89.5"	"1.4"	"113.5"	"112.9"	""	"422"	"29"	"33.000"	"26.000"	"0.0274335780965024"	"23"	"0.0001991"	"0.005681"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NADNDWFR"	"[K].nADNDWFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"Q6BBI8"	"Ubiquitin-fold modifier-conjugating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ufc1 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"633.80737"	"1266.60747"	"1266.60647"	"0.79"	"0.00050"	"6/74"	"6"	"74"	"695030.45111084"	"HCD"	"MS2"	"0"	"49.5"	"100.000"	"62.5669"	"20422"	"20422"	"20395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.0"	""	"61.5"	""	"69.9"	""	"90.3"	""	"82.9"	"97.9"	""	"438"	"26"	"33.000"	"26.000"	"0.0527769288882364"	"20"	"0.001049"	"0.008584"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"633.82947"	"1266.65166"	"1266.65275"	"-0.86"	"-0.00054"	"5/72"	"5"	"72"	"850244.372131348"	"HCD"	"MS2"	"7.913658"	"60.5"	"100.000"	"65.6268"	"21665"	"21665"	"21643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.3"	""	"75.1"	""	"86.5"	""	"90.4"	""	"113.9"	"121.3"	""	"638"	"29"	"35.000"	"28.000"	"0.0423438832015787"	"21"	"9.9E-05"	"0.0004674"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"633.83057"	"1266.65386"	"1266.65275"	"0.88"	"0.00055"	"5/72"	"5"	"72"	"986943.406921387"	"HCD"	"MS2"	"3.304444"	"63.6"	"100.000"	"65.5590"	"21671"	"21671"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.4"	""	"69.7"	""	"77.6"	""	"102.9"	""	"124.7"	"125.8"	""	"660"	"29"	"35.000"	"28.000"	"0.0395834770039295"	"22"	"0"	"0.0003691"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"633.83075"	"1266.65422"	"1266.65275"	"1.16"	"0.00074"	"8/72"	"8"	"72"	"1203351.63995361"	"HCD"	"MS2"	"5.374095"	"103.2"	"100.000"	"65.2411"	"21541"	"21541"	"21520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.1"	""	"126.1"	""	"141.7"	""	"122.1"	"1.9"	"231.5"	"191.2"	""	"665"	"21"	"35.000"	"28.000"	"0.283655787910848"	"18"	"9.9E-05"	"0.0008254"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADDTFEALR"	"[R].aDDTFEALR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"633.83099"	"1266.65471"	"1266.65275"	"1.55"	"0.00098"	"7/72"	"7"	"72"	"1140178.41992188"	"HCD"	"MS2"	"4.5026"	"84.1"	"100.000"	"65.3186"	"21539"	"21539"	"21519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.6"	""	"104.8"	""	"104.0"	""	"106.2"	"2.9"	"174.9"	"170.5"	""	"661"	"29"	"35.000"	"28.000"	"0.0397348395641055"	"18"	"9.9E-05"	"0.0005871"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.84705"	"1266.68682"	"1266.68913"	"-1.83"	"-0.00116"	"8/70"	"8"	"70"	"1368988.53942871"	"HCD"	"MS2"	"12.68734"	"100.9"	"100.000"	"49.9101"	"15282"	"15282"	"15262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.3"	""	"142.3"	""	"155.8"	""	"131.5"	"2.9"	"168.1"	"182.7"	""	"687"	"31"	"35.000"	"28.000"	"0.0298487907459845"	"14"	"0"	"0.0003648"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"633.84753"	"1266.68779"	"1266.68913"	"-1.06"	"-0.00067"	"7/70"	"7"	"70"	"1442693.28887939"	"HCD"	"MS2"	"0"	"84.3"	"100.000"	"49.6040"	"15158"	"15158"	"15132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.0"	""	"112.1"	""	"117.8"	""	"127.1"	"0.6"	"143.5"	"166.3"	""	"716"	"26"	"35.000"	"28.000"	"0.0913867066352727"	"16"	"9.9E-05"	"0.0005901"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"633.84784"	"1266.68840"	"1266.68913"	"-0.58"	"-0.00037"	"7/70"	"7"	"70"	"1752746.15612793"	"HCD"	"MS2"	"5.005438"	"107.7"	"100.000"	"49.4924"	"15147"	"15147"	"15127"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.2"	"2.5"	"145.4"	""	"155.0"	""	"160.0"	""	"194.3"	"192.2"	""	"713"	"37"	"35.000"	"28.000"	"0.00734614564080755"	"18"	"0"	"9.424E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLAESYER"	"[K].aVLAESYER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"Q63270"	"Cytoplasmic aconitate hydratase OS=Rattus norvegicus OX=10116 GN=Aco1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"633.84790"	"1266.68852"	"1266.68913"	"-0.48"	"-0.00030"	"8/70"	"8"	"70"	"950292.23223877"	"HCD"	"MS2"	"9.045159"	"61.4"	"100.000"	"49.1704"	"15016"	"15016"	"14999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.0"	""	"72.7"	""	"85.7"	""	"105.4"	"0.7"	"115.6"	"117.0"	""	"715"	"30"	"35.000"	"28.000"	"0.0320830794034017"	"22"	"9.9E-05"	"0.0007625"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTADETSK"	"[K].gTADETSk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"633.85077"	"1266.69426"	"1266.69417"	"0.07"	"0.00005"	"11/66"	"11"	"66"	"343790.723144531"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"24.0162"	"4834"	"4834"	"4807"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.5"	""	"36.4"	""	"31.6"	""	"69.1"	""	"82.8"	"75.3"	""	"684"	"33"	"35.000"	"28.000"	"0.0172594163766727"	"20"	"0.0001991"	"0.002145"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"633.85541"	"1266.70354"	"1266.70439"	"-0.67"	"-0.00042"	"7/64"	"7"	"64"	"1358770.49291992"	"HCD"	"MS2"	"3.218285"	"70.6"	"100.000"	"100.4454"	"35773"	"35773"	"35753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.7"	""	"117.1"	""	"98.4"	""	"113.8"	"0.6"	"120.4"	"126.3"	""	"692"	"40"	"35.000"	"28.000"	"0.00387325507679635"	"21"	"0"	"0.0002515"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"633.85577"	"1266.70427"	"1266.70439"	"-0.09"	"-0.00006"	"6/64"	"6"	"64"	"1247662.57977295"	"HCD"	"MS2"	"0"	"68.2"	"100.000"	"100.7407"	"35894"	"35894"	"35877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.2"	""	"96.0"	""	"100.6"	""	"94.4"	"1.5"	"135.6"	"131.9"	""	"700"	"31"	"35.000"	"28.000"	"0.0284490680657435"	"20"	"0"	"0.0001756"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"633.85596"	"1266.70464"	"1266.70439"	"0.20"	"0.00012"	"6/64"	"6"	"64"	"892787.027648926"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"100.6657"	"35836"	"35836"	"35819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.5"	""	"64.1"	""	"67.2"	""	"73.6"	""	"89.7"	"98.7"	""	"694"	"29"	"35.000"	"28.000"	"0.0418147471309014"	"16"	"0"	"0.0003966"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYDFPAVLR"	"[R].gYDFPAVLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"633.85596"	"1266.70464"	"1266.70439"	"0.20"	"0.00012"	"7/64"	"7"	"64"	"1735190.23693848"	"HCD"	"MS2"	"3.434669"	"90.1"	"100.000"	"100.3609"	"35711"	"35711"	"35692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.4"	""	"131.6"	""	"116.5"	""	"141.8"	"1.6"	"158.5"	"177.3"	""	"694"	"34"	"35.000"	"28.000"	"0.0135621790839964"	"16"	"0"	"0.0003186"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSAVAK"	"[R].aFDSAVAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"633.87500"	"1266.74272"	"1266.74581"	"-2.44"	"-0.00154"	"7/58"	"7"	"58"	"952823.599060059"	"HCD"	"MS2"	"100"	"83.7"	"100.000"	"55.3527"	"17532"	"17532"	"17506"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.6"	""	"123.6"	""	"132.1"	""	"119.3"	""	"148.3"	"172.0"	""	"488"	"21"	"33.000"	"26.000"	"0.186805572086346"	"19"	"0.0001686"	"0.001694"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDSAVAK"	"[R].aFDSAVAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"633.87537"	"1266.74346"	"1266.74581"	"-1.86"	"-0.00118"	"7/58"	"7"	"58"	"677769.255249023"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"55.8103"	"17684"	"17684"	"17662"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.2"	""	"83.3"	""	"87.9"	""	"94.2"	"0.7"	"115.1"	"121.0"	""	"492"	"20"	"33.000"	"26.000"	"0.22958055799606"	"21"	"0.0001686"	"0.001412"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"633.87585"	"1266.74443"	"1266.74581"	"-1.09"	"-0.00069"	"6/58"	"6"	"58"	"974581.282165527"	"HCD"	"MS2"	"38.92463"	"88.7"	"100.000"	"58.7932"	"18926"	"18926"	"18903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.3"	""	"127.8"	""	"129.8"	""	"139.6"	""	"163.7"	"153.7"	""	"481"	"29"	"33.000"	"26.000"	"0.032071190443528"	""	"0.001103"	"0.009002"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIDYQK"	"[R].aAIDYQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"633.87592"	"1266.74455"	"1266.74581"	"-0.99"	"-0.00063"	"12/50"	"12"	"50"	"1473648.54724121"	"HCD"	"MS2"	"0"	"135.3"	"100.000"	"48.5568"	"14732"	"14732"	"14718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.8"	""	"178.1"	""	"199.1"	""	"208.4"	""	"240.5"	"231.3"	""	"481"	"33"	"33.000"	"26.000"	"0.0120813392780134"	""	"0.001103"	"0.00909"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AINEAYK"	"[R].aINEAYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"633.87598"	"1266.74468"	"1266.74581"	"-0.89"	"-0.00057"	"12/56"	"12"	"56"	"2234832.11828613"	"HCD"	"MS2"	"53.07622"	"197.1"	"100.000"	"45.4168"	"13462"	"13462"	"13440"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.2"	""	"214.5"	""	"207.1"	""	"360.6"	""	"439.3"	"443.4"	""	"481"	"32"	"33.000"	"26.000"	"0.014424975383945"	""	"0.001348"	"0.01146"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"633.87598"	"1266.74468"	"1266.74581"	"-0.89"	"-0.00057"	"6/58"	"6"	"58"	"5535596.68634033"	"HCD"	"MS2"	"6.637578"	"460.2"	"100.000"	"59.3044"	"19099"	"19099"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"748.9"	""	"656.6"	""	"665.4"	""	"737.4"	""	"791.4"	"754.2"	""	"481"	"30"	"33.000"	"26.000"	"0.0263096506088439"	""	"0.00307"	"0.03403"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"633.87622"	"1266.74516"	"1266.74581"	"-0.51"	"-0.00032"	"12/58"	"12"	"58"	"4970510.24505615"	"HCD"	"MS2"	"6.488001"	"404.0"	"100.000"	"59.0879"	"19046"	"19046"	"19029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"649.0"	""	"582.8"	""	"577.4"	""	"650.0"	""	"674.9"	"689.3"	""	"478"	"32"	"33.000"	"26.000"	"0.0135643160692643"	""	"0.001872"	"0.01544"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"633.87628"	"1266.74529"	"1266.74581"	"-0.41"	"-0.00026"	"6/58"	"6"	"58"	"570462.485473633"	"HCD"	"MS2"	"12.88311"	"58.0"	"100.000"	"59.7392"	"19309"	"19309"	"19288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.7"	""	"77.4"	""	"83.3"	""	"82.0"	""	"109.8"	"111.1"	""	"478"	"7"	"33.000"	"26.000"	"4.66012859342173"	"19"	"0.004819"	"0.05838"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIDYQK"	"[R].aAIDYQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"633.87628"	"1266.74529"	"1266.74581"	"-0.41"	"-0.00026"	"12/50"	"12"	"50"	"1742113.18994141"	"HCD"	"MS2"	"5.754172"	"156.6"	"100.000"	"48.3023"	"14665"	"14665"	"14655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.3"	""	"195.3"	""	"214.7"	""	"238.7"	""	"291.2"	"281.9"	""	"478"	"33"	"33.000"	"26.000"	"0.0115983951538747"	""	"0.001162"	"0.009211"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"633.87628"	"1266.74529"	"1266.74581"	"-0.41"	"-0.00026"	"6/58"	"6"	"58"	"3742231.71789551"	"HCD"	"MS2"	"1.794348"	"308.4"	"100.000"	"59.6125"	"19224"	"19224"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"460.7"	""	"416.3"	""	"454.6"	""	"458.2"	""	"568.3"	"564.8"	""	"478"	"29"	"33.000"	"26.000"	"0.027886749847757"	""	"0.001951"	"0.01658"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AINEAYK"	"[R].aINEAYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"633.87640"	"1266.74553"	"1266.74581"	"-0.22"	"-0.00014"	"12/56"	"12"	"56"	"4570614.85888672"	"HCD"	"MS2"	"16.11346"	"386.2"	"100.000"	"45.2087"	"13411"	"13411"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"397.6"	""	"374.6"	""	"422.0"	""	"721.4"	"10.5"	"890.0"	"859.6"	""	"478"	"31"	"33.000"	"26.000"	"0.0169980029763146"	"23"	"0.002035"	"0.01814"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.2333"	"0.0000"	"1"	"1"	"1"	"633.87646"	"1266.74565"	"1266.74581"	"-0.12"	"-0.00008"	"6/58"	"6"	"58"	"806842.891174316"	"HCD"	"MS2"	"46.67796"	"75.9"	"100.000"	"59.0004"	"18975"	"18975"	"18949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.1"	""	"102.6"	""	"99.3"	""	"138.5"	""	"136.1"	"135.4"	""	"478"	"30"	"33.000"	"26.000"	"0.0213500010612258"	""	"0.0001991"	"0.003924"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGTNIK"	"[K].eFGTNIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"633.87659"	"1266.74590"	"1266.74581"	"0.07"	"0.00004"	"6/58"	"6"	"58"	"4617260.14178467"	"HCD"	"MS2"	"0.4654254"	"368.6"	"100.000"	"59.3733"	"19162"	"19162"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"550.7"	""	"477.0"	""	"528.4"	""	"592.3"	""	"668.8"	"678.2"	""	"473"	"30"	"33.000"	"26.000"	"0.0262319843809558"	""	"0.002035"	"0.01796"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFTADVK"	"[K].qFTADVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"633.87842"	"1266.74956"	"1266.74581"	"2.96"	"0.00188"	"6/64"	"6"	"64"	"645151.077087402"	"HCD"	"MS2"	"14.63134"	"62.7"	"100.000"	"54.8682"	"17300"	"17300"	"17273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"72.9"	""	"80.9"	""	"100.7"	""	"121.4"	"135.7"	""	"480"	"21"	"33.000"	"26.000"	"0.189762870719958"	"26"	"0.001488"	"0.01271"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFTADVK"	"[K].qFTADVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"633.87848"	"1266.74968"	"1266.74581"	"3.06"	"0.00194"	"12/64"	"12"	"64"	"597587.089477539"	"HCD"	"MS2"	"10.32571"	"61.8"	"100.000"	"54.5439"	"17202"	"17202"	"17173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.1"	""	"71.6"	""	"79.6"	""	"103.3"	"1.1"	"127.9"	"120.2"	""	"480"	"23"	"33.000"	"26.000"	"0.115934112489545"	"24"	"0.001261"	"0.01019"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHIEELLR"	"[R].eHIEELLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"423.24429"	"1267.71833"	"1267.72077"	"-1.93"	"-0.00081"	"5/64"	"5"	"64"	"1642218.90270996"	"HCD"	"MS2"	"36.33812"	"73.3"	"100.000"	"56.5938"	"17995"	"17995"	"17983"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.2"	""	"50.7"	""	"64.3"	""	"64.5"	""	"75.5"	"406.6"	""	"595"	"16"	"34.000"	"27.000"	"0.743852745104689"	"17"	"0.000264"	"0.006119"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADYEK"	"[R].aIADYEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"634.36774"	"1267.72820"	"1267.72982"	"-1.28"	"-0.00081"	"6/52"	"6"	"52"	"952238.819885254"	"HCD"	"MS2"	"6.873172"	"90.3"	"100.000"	"52.9908"	"16534"	"16534"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.3"	""	"117.3"	""	"130.9"	""	"137.6"	""	"170.3"	"174.6"	""	"560"	"30"	"34.000"	"27.000"	"0.0291177646432136"	""	"0.0001991"	"0.005459"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLADFEK"	"[R].sLADFEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"F1LMZ8"	"26S proteasome non-ATPase regulatory subunit 11 OS=Rattus norvegicus OX=10116 GN=Psmd11 PE=1 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"634.36780"	"1267.72832"	"1267.72982"	"-1.19"	"-0.00075"	"6/58"	"6"	"58"	"2017292.23724365"	"HCD"	"MS2"	"39.98525"	"117.1"	"100.000"	"80.0462"	"27513"	"27513"	"27493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.6"	""	"151.1"	""	"163.2"	""	"188.0"	""	"226.9"	"227.5"	""	"544"	"11"	"34.000"	"27.000"	"2.12113790062327"	"22"	"0.004213"	"0.0477"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQIVGPPR"	"[R].sGQQIVGPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.36798"	"1267.72869"	"1267.73200"	"-2.61"	"-0.00166"	"7/86"	"7"	"86"	"834876.064025879"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"35.3554"	"9379"	"9379"	"9358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.4"	""	"53.7"	""	"69.2"	""	"119.6"	""	"127.3"	"102.8"	""	"525"	"23"	"34.000"	"27.000"	"0.143261438536459"	"14"	"0.0001991"	"0.003063"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIADYEK"	"[R].aIADYEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"F1M707"	"Neutrophil cytosolic factor 1 OS=Rattus norvegicus OX=10116 GN=Ncf1 PE=1 SV=2"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"634.36798"	"1267.72869"	"1267.72982"	"-0.90"	"-0.00057"	"6/52"	"6"	"52"	"969064.150817871"	"HCD"	"MS2"	"14.20072"	"85.8"	"100.000"	"52.6962"	"16448"	"16448"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.9"	""	"110.3"	""	"116.4"	""	"132.0"	""	"159.8"	"173.5"	""	"525"	"31"	"34.000"	"27.000"	"0.0207075780874871"	""	"0.001049"	"0.008605"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGQQIVGPPR"	"[R].sGQQIVGPPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"634.36884"	"1267.73039"	"1267.73200"	"-1.27"	"-0.00080"	"5/86"	"5"	"86"	"1860837.35577393"	"HCD"	"MS2"	"43.08479"	"125.6"	"100.000"	"35.2085"	"9357"	"9357"	"9337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.1"	""	"145.2"	""	"169.2"	""	"233.1"	""	"294.2"	"239.5"	""	"509"	"12"	"34.000"	"27.000"	"1.5089949510561"	"14"	"0.001049"	"0.008598"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYASGNVK"	"[K].aYASGNVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"634.37140"	"1267.73552"	"1267.74106"	"-4.37"	"-0.00277"	"7/60"	"7"	"60"	"1320028.16400146"	"HCD"	"MS2"	"0"	"106.7"	"100.000"	"35.6835"	"9512"	"9512"	"9491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.1"	""	"108.1"	""	"85.6"	""	"217.4"	""	"253.6"	"263.0"	""	"477"	"24"	"33.000"	"26.000"	"0.102680596602273"	"25"	"0.0001991"	"0.002312"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYASGNVK"	"[K].aYASGNVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"634.37299"	"1267.73870"	"1267.74106"	"-1.86"	"-0.00118"	"12/60"	"12"	"60"	"2194908.52502441"	"HCD"	"MS2"	"9.851639"	"182.9"	"100.000"	"35.6148"	"9521"	"9521"	"9496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.1"	""	"160.9"	""	"132.5"	""	"356.0"	""	"467.5"	"513.4"	""	"469"	"38"	"33.000"	"26.000"	"0.00360697263151061"	"19"	"9.9E-05"	"0.0008257"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"634.38135"	"1267.75542"	"1267.75715"	"-1.37"	"-0.00087"	"9/74"	"9"	"74"	"2572593.04449463"	"HCD"	"MS2"	"44.33927"	"109.7"	"100.000"	"80.0853"	"27529"	"27529"	"27509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.4"	""	"145.2"	""	"154.8"	""	"173.4"	"0.2"	"209.1"	"203.9"	""	"377"	"25"	"32.000"	"25.000"	"0.0627063257959198"	"25"	"0.0001991"	"0.004776"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"634.38177"	"1267.75627"	"1267.75715"	"-0.69"	"-0.00044"	"9/74"	"9"	"74"	"2575881.0793457"	"HCD"	"MS2"	"44.77272"	"115.1"	"100.000"	"80.1654"	"27589"	"27589"	"27570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.9"	""	"152.1"	""	"158.9"	""	"185.0"	""	"227.7"	"217.7"	""	"374"	"31"	"32.000"	"25.000"	"0.016100583165852"	"23"	"0.0001991"	"0.002513"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"634.38184"	"1267.75640"	"1267.75715"	"-0.60"	"-0.00038"	"9/74"	"9"	"74"	"8867526.14123535"	"HCD"	"MS2"	"0.2230165"	"185.8"	"100.000"	"80.3705"	"27645"	"27645"	"27634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.4"	""	"255.3"	""	"239.1"	""	"314.3"	"6.7"	"364.9"	"355.8"	""	"374"	"31"	"32.000"	"25.000"	"0.0164756139252499"	"20"	"0.000264"	"0.006003"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"634.38208"	"1267.75688"	"1267.75715"	"-0.21"	"-0.00013"	"5/74"	"5"	"74"	"719861.546936035"	"HCD"	"MS2"	"19.64146"	"28.6"	"100.000"	"80.9768"	"27891"	"27891"	"27875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"34.0"	""	"42.4"	""	"44.0"	"0.9"	"58.6"	"55.6"	""	"374"	"14"	"32.000"	"25.000"	"0.677394407039227"	""	"0.001348"	"0.01119"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"634.38226"	"1267.75725"	"1267.75715"	"0.08"	"0.00005"	"9/74"	"9"	"74"	"9781263.05114746"	"HCD"	"MS2"	"0.249534"	"202.9"	"100.000"	"80.4810"	"27717"	"27717"	"27700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"230.0"	""	"266.6"	""	"268.3"	""	"350.3"	"1.9"	"400.0"	"408.6"	""	"381"	"34"	"32.000"	"25.000"	"0.0080333183903145"	"20"	"0.0001991"	"0.003512"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"634.38232"	"1267.75737"	"1267.75715"	"0.17"	"0.00011"	"9/74"	"9"	"74"	"5450531.21228027"	"HCD"	"MS2"	"0"	"116.0"	"100.000"	"80.6700"	"27767"	"27767"	"27752"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.2"	""	"150.8"	""	"161.2"	""	"182.1"	"0.7"	"234.4"	"239.7"	""	"352"	"33"	"32.000"	"25.000"	"0.00947354817228668"	"20"	"0.0001991"	"0.003249"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPVGPETLGR"	"[K].iPVGPETLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"634.38257"	"1267.75786"	"1267.75715"	"0.56"	"0.00035"	"9/74"	"9"	"74"	"4229910.17419434"	"HCD"	"MS2"	"0"	"91.2"	"100.000"	"80.7921"	"27844"	"27844"	"27827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.7"	""	"123.0"	""	"111.5"	""	"153.0"	""	"192.6"	"192.8"	""	"351"	"38"	"32.000"	"25.000"	"0.00298728818223314"	"22"	"0.0001991"	"0.002151"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTEVLK"	"[K].gYTEVLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"634.38586"	"1267.76445"	"1267.76621"	"-1.39"	"-0.00088"	"12/50"	"12"	"50"	"1328181.35076904"	"HCD"	"MS2"	"0"	"110.7"	"100.000"	"64.0603"	"21061"	"21061"	"21047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.4"	""	"164.0"	""	"159.7"	""	"153.2"	""	"203.7"	"206.3"	""	"326"	"23"	"32.000"	"25.000"	"0.07801670504859"	"21"	"0.001951"	"0.01685"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYTEVLK"	"[K].gYTEVLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"Q10728"	"Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"634.38593"	"1267.76457"	"1267.76621"	"-1.29"	"-0.00082"	"12/50"	"12"	"50"	"1203165.75146484"	"HCD"	"MS2"	"20.35717"	"101.3"	"100.000"	"64.1075"	"21048"	"21048"	"21029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.1"	""	"148.1"	""	"161.4"	""	"144.2"	"0.2"	"167.6"	"184.8"	""	"326"	"37"	"32.000"	"25.000"	"0.00346088847306036"	""	"0.0001991"	"0.002412"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWMVVR.[N]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"634.83167"	"1268.65605"	"1268.65684"	"-0.62"	"-0.00039"	"11/82"	"11"	"82"	"418981.161621094"	"HCD"	"MS2"	"49.2479"	"15.6"	"100.000"	"91.7800"	"32275"	"32275"	"32251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.0"	""	"21.6"	""	"17.1"	""	"24.9"	""	"28.2"	"25.9"	"NoQuanLabels"	"647"	"17"	"35.000"	"28.000"	"0.671234522896664"	"19"	"0.003529"	"0.03855"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWMVVR.[N]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"634.83179"	"1268.65630"	"1268.65684"	"-0.43"	"-0.00027"	"11/82"	"11"	"82"	"421798.629638672"	"HCD"	"MS2"	"49.78656"	"16.9"	"100.000"	"91.8175"	"32255"	"32255"	"32225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"20.5"	""	"25.5"	""	"30.1"	""	"21.8"	"30.8"	"NoQuanLabels"	"647"	"14"	"35.000"	"28.000"	"1.40240769158366"	"17"	"0.007989"	"0.1013"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDTDGK"	"[K].fQDTDGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"634.84802"	"1268.68877"	"1268.68869"	"0.06"	"0.00004"	"10/62"	"10"	"62"	"3543917.60662842"	"HCD"	"MS2"	"0"	"309.1"	"100.000"	"41.7744"	"12012"	"12012"	"11987"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.8"	""	"264.8"	""	"330.1"	""	"568.5"	""	"671.9"	"671.2"	""	"657"	"22"	"35.000"	"28.000"	"0.19034232677623"	"17"	"0.004852"	"0.05963"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDTDGK"	"[K].fQDTDGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"634.84808"	"1268.68889"	"1268.68869"	"0.16"	"0.00010"	"10/62"	"10"	"62"	"2683932.11401367"	"HCD"	"MS2"	"0"	"239.1"	"100.000"	"41.8853"	"12023"	"12023"	"12002"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"328.8"	""	"214.5"	""	"230.8"	""	"452.8"	""	"522.1"	"527.7"	""	"657"	"22"	"35.000"	"28.000"	"0.197031368549935"	"17"	"0.004213"	"0.04674"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.57925"	"1268.72321"	"1268.72507"	"-1.47"	"-0.00062"	"9/68"	"9"	"68"	"3620123.37261963"	"HCD"	"MS2"	"15.02391"	"186.9"	"100.000"	"45.4432"	"13507"	"13507"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.3"	""	"236.4"	""	"242.2"	""	"283.6"	""	"375.6"	"406.2"	""	"543"	"28"	"34.000"	"27.000"	"0.0433281188474773"	"15"	"0.001951"	"0.01706"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.57935"	"1268.72348"	"1268.72507"	"-1.25"	"-0.00053"	"9/68"	"9"	"68"	"3755390.70709229"	"HCD"	"MS2"	"50.07517"	"189.5"	"100.000"	"45.6768"	"13568"	"13568"	"13541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"253.6"	""	"233.2"	""	"242.4"	""	"316.7"	""	"364.3"	"388.8"	""	"543"	"25"	"34.000"	"27.000"	"0.093706525229685"	"14"	"0.0001991"	"0.00383"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"634.86584"	"1268.72441"	"1268.72507"	"-0.52"	"-0.00033"	"7/68"	"7"	"68"	"17662276.6750488"	"HCD"	"MS2"	"0"	"736.9"	"55.403"	"45.8473"	"13638"	"13638"	"13621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"978.9"	""	"867.5"	""	"917.8"	""	"1148.0"	"2.2"	"1456.4"	"1625.1"	""	"528"	"45"	"34.000"	"27.000"	"0.000913279957460962"	"18"	"0.0001686"	"0.001652"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"634.86591"	"1268.72453"	"1268.72507"	"-0.42"	"-0.00027"	"7/68"	"7"	"68"	"15977776.1471558"	"HCD"	"MS2"	"7.31425"	"1185.0"	"100.000"	"45.2752"	"13438"	"13438"	"13420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1659.9"	""	"1453.4"	""	"1409.3"	""	"1947.9"	""	"2326.3"	"2455.3"	""	"528"	"34"	"34.000"	"27.000"	"0.0112876601944019"	"16"	"0.0001991"	"0.002887"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"634.86597"	"1268.72466"	"1268.72507"	"-0.33"	"-0.00021"	"7/68"	"7"	"68"	"12174887.9105835"	"HCD"	"MS2"	"0"	"896.8"	"100.000"	"45.5343"	"13510"	"13510"	"13494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1225.5"	""	"1115.6"	""	"1066.0"	""	"1501.1"	""	"1736.5"	"1867.2"	""	"528"	"35"	"34.000"	"27.000"	"0.00770200731696308"	"17"	"0.0001991"	"0.004977"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGYLAGDK"	"[K].sGYLAGDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"634.86609"	"1268.72490"	"1268.72507"	"-0.14"	"-0.00009"	"7/68"	"7"	"68"	"12886558.4584961"	"HCD"	"MS2"	"0"	"625.8"	"68.646"	"45.5745"	"13561"	"13561"	"13544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"828.4"	""	"745.5"	""	"781.1"	""	"980.4"	""	"1236.2"	"1378.3"	""	"528"	"34"	"34.000"	"27.000"	"0.0101532230459973"	"18"	"0.0001991"	"0.004782"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEHINK"	"[K].aVEHINk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3;Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"634.88922"	"1268.77117"	"1268.77269"	"-1.20"	"-0.00076"	"12/50"	"12"	"50"	"1081110.91943359"	"HCD"	"MS2"	"0"	"84.9"	"100.000"	"29.6927"	"7139"	"7139"	"7123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.3"	""	"92.9"	""	"116.4"	""	"146.4"	""	"143.9"	"158.6"	""	"255"	"34"	"31.000"	"24.000"	"0.00532733717474443"	"16"	"0.0001991"	"0.00551"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEHINK"	"[K].aVEHINk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3;Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"423.59534"	"1268.77146"	"1268.77269"	"-0.97"	"-0.00041"	"7/50"	"7"	"50"	"14238936.6317139"	"HCD"	"MS2"	"66.202"	"503.6"	"52.101"	"30.2031"	"7304"	"7304"	"7288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"609.6"	""	"663.9"	""	"717.0"	""	"807.8"	""	"973.2"	"1014.6"	""	"253"	"11"	"31.000"	"24.000"	"1.10685447566271"	"13"	"0.009275"	"0.12"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEHINK"	"[K].aVEHINk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3;Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"423.59540"	"1268.77164"	"1268.77269"	"-0.83"	"-0.00035"	"6/50"	"6"	"50"	"94576217.4907227"	"HCD"	"MS2"	"36.4583"	"524.1"	"12.237"	"29.9209"	"7190"	"7190"	"7182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"832.4"	""	"691.9"	""	"719.4"	""	"775.5"	""	"893.5"	"1057.0"	""	"253"	"38"	"31.000"	"24.000"	"0.00201414403971973"	"20"	"0.0001991"	"0.003186"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEHINK"	"[K].aVEHINk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3;Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"423.59549"	"1268.77192"	"1268.77269"	"-0.61"	"-0.00026"	"10/50"	"10"	"50"	"90113724.1621094"	"HCD"	"MS2"	"33.73042"	"569.3"	"13.780"	"29.7823"	"7175"	"7175"	"7164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"917.7"	""	"738.0"	""	"775.6"	""	"852.7"	""	"938.8"	"1178.5"	""	"253"	"32"	"31.000"	"24.000"	"0.00883263991157622"	"20"	"0.001348"	"0.01128"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEHINK"	"[K].aVEHINk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3;Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P15429; P04764"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"634.89001"	"1268.77275"	"1268.77269"	"0.05"	"0.00003"	"6/50"	"6"	"50"	"1570879.30963135"	"HCD"	"MS2"	"0"	"117.5"	"100.000"	"29.8934"	"7180"	"7180"	"7164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"207.6"	""	"147.0"	""	"145.1"	""	"194.7"	""	"189.1"	"230.7"	""	"266"	"32"	"31.000"	"24.000"	"0.00763574894735746"	"23"	"0.0009352"	"0.007899"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"635.34485"	"1269.68242"	"1269.68394"	"-1.19"	"-0.00076"	"12/72"	"12"	"72"	"1841817.7442627"	"HCD"	"MS2"	"0"	"162.4"	"100.000"	"26.3141"	"5760"	"5760"	"5735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.4"	""	"145.1"	""	"126.2"	""	"334.4"	""	"402.8"	"379.2"	""	"678"	"36"	"35.000"	"28.000"	"0.00931536117901713"	"21"	"0.0001686"	"0.001556"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"635.34509"	"1269.68291"	"1269.68394"	"-0.81"	"-0.00051"	"7/72"	"7"	"72"	"1082122.5088501"	"HCD"	"MS2"	"0"	"91.9"	"100.000"	"26.4368"	"5845"	"5845"	"5838"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.0"	""	"85.4"	""	"76.1"	""	"171.7"	"0.3"	"219.0"	"221.2"	""	"668"	"28"	"35.000"	"28.000"	"0.0504366771490826"	"21"	"0.0001991"	"0.002073"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"635.34515"	"1269.68303"	"1269.68394"	"-0.71"	"-0.00045"	"7/72"	"7"	"72"	"3609035.72106934"	"HCD"	"MS2"	"0"	"308.8"	"100.000"	"26.1718"	"5742"	"5742"	"5715"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"268.7"	""	"275.7"	""	"226.0"	""	"631.4"	""	"770.9"	"776.7"	""	"668"	"41"	"35.000"	"28.000"	"0.00281025977309495"	"22"	"9.9E-05"	"0.001"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGYQGDK"	"[R].gSGYQGDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"635.34570"	"1269.68413"	"1269.68394"	"0.15"	"0.00010"	"7/72"	"7"	"72"	"1303477.93774414"	"HCD"	"MS2"	"0"	"132.4"	"100.000"	"26.6120"	"5878"	"5878"	"5866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.0"	""	"116.2"	""	"103.8"	""	"241.9"	""	"331.0"	"352.3"	""	"668"	"45"	"35.000"	"28.000"	"0.00107336261990587"	"17"	"0"	"0.0003311"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"635.35742"	"1269.70757"	"1269.71126"	"-2.91"	"-0.00185"	"12/94"	"12"	"94"	"968479.626220703"	"HCD"	"MS2"	"0"	"54.5"	"100.000"	"36.5456"	"9859"	"9859"	"9843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"52.7"	""	"64.6"	""	"101.1"	""	"123.7"	"124.5"	""	"577"	"37"	"34.000"	"27.000"	"0.00545941133979076"	"18"	"9.9E-05"	"0.0009267"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDEASK"	"[K].yVDEASk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"635.35742"	"1269.70757"	"1269.70909"	"-1.20"	"-0.00076"	"6/54"	"6"	"54"	"2591853.5446167"	"HCD"	"MS2"	"0"	"227.1"	"100.000"	"39.6814"	"11167"	"11167"	"11150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.1"	""	"255.0"	""	"278.8"	""	"423.5"	""	"493.2"	"425.1"	""	"577"	"32"	"34.000"	"27.000"	"0.0203772614404865"	"22"	"0.002035"	"0.01858"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDEASK"	"[K].yVDEASk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"635.35754"	"1269.70781"	"1269.70909"	"-1.01"	"-0.00064"	"6/54"	"6"	"54"	"1533869.84796143"	"HCD"	"MS2"	"0"	"136.5"	"100.000"	"39.3836"	"11049"	"11049"	"11029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.0"	""	"156.0"	""	"158.7"	""	"249.0"	""	"288.7"	"258.9"	""	"550"	"32"	"34.000"	"27.000"	"0.0185068580478188"	"25"	"0.001453"	"0.01194"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDEASK"	"[K].yVDEASk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"635.35767"	"1269.70806"	"1269.70909"	"-0.81"	"-0.00052"	"10/54"	"10"	"54"	"2483586.35137939"	"HCD"	"MS2"	"0"	"218.5"	"100.000"	"39.7016"	"11141"	"11141"	"11126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"268.6"	""	"233.5"	""	"275.0"	""	"394.1"	""	"493.4"	"413.0"	""	"550"	"25"	"34.000"	"27.000"	"0.0861653574186787"	"21"	"0.002525"	"0.02417"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"635.35919"	"1269.71111"	"1269.71126"	"-0.12"	"-0.00008"	"12/94"	"12"	"94"	"1147662.92608643"	"HCD"	"MS2"	"0"	"68.4"	"100.000"	"36.7713"	"9988"	"9988"	"9965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.4"	""	"74.5"	""	"79.4"	""	"130.5"	""	"141.3"	"153.0"	""	"563"	"37"	"34.000"	"27.000"	"0.00622986160753987"	"17"	"9.9E-05"	"0.000518"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"635.35919"	"1269.71111"	"1269.71126"	"-0.12"	"-0.00008"	"7/94"	"7"	"94"	"1399524.25598145"	"HCD"	"MS2"	"3.907997"	"76.7"	"100.000"	"36.8535"	"9984"	"9984"	"9961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.1"	""	"84.5"	""	"93.2"	""	"137.8"	""	"174.6"	"160.1"	""	"563"	"40"	"34.000"	"27.000"	"0.00296809911334139"	"20"	"0"	"0.0001648"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQNAPSLPSR"	"[R].aQNAPSLPSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"635.35931"	"1269.71135"	"1269.71126"	"0.07"	"0.00004"	"12/94"	"12"	"94"	"1022895.91497803"	"HCD"	"MS2"	"0"	"56.4"	"100.000"	"36.4428"	"9855"	"9855"	"9836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.3"	""	"65.0"	""	"63.4"	""	"108.5"	""	"127.5"	"113.5"	""	"563"	"37"	"34.000"	"27.000"	"0.00537623692286396"	"20"	"0.0001686"	"0.001426"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGASGSFK"	"[K].gTGASGSFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D3ZBN0; P15865; P06349"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"635.36304"	"1269.71880"	"1269.72032"	"-1.20"	"-0.00076"	"7/74"	"7"	"74"	"4547992.95184326"	"HCD"	"MS2"	"2.276232"	"388.9"	"100.000"	"35.9268"	"9611"	"9611"	"9589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"543.0"	""	"665.9"	""	"780.4"	""	"496.5"	"0.1"	"728.9"	"460.7"	""	"522"	"42"	"34.000"	"27.000"	"0.00160931295485847"	"22"	"0"	"0.0003408"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGASGSFK"	"[K].gTGASGSFk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"D3ZBN0; P15865; P06349"	"Histone H1.5 OS=Rattus norvegicus OX=10116 GN=Hist1h1b PE=1 SV=1; Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"635.36359"	"1269.71990"	"1269.72032"	"-0.34"	"-0.00021"	"8/74"	"8"	"74"	"4651977.05273438"	"HCD"	"MS2"	"9.934645"	"380.1"	"100.000"	"35.7870"	"9591"	"9591"	"9570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"536.3"	""	"658.5"	""	"757.7"	""	"495.7"	""	"693.4"	"451.1"	""	"511"	"41"	"34.000"	"27.000"	"0.00183819213879945"	"24"	"0"	"0.0003811"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPEPNIK"	"[K].nPEPNIk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"635.38141"	"1269.75554"	"1269.75671"	"-0.92"	"-0.00058"	"4/60"	"4"	"60"	"1263615.80218506"	"HCD"	"MS2"	"18.90133"	"89.8"	"100.000"	"40.6535"	"11562"	"11562"	"11537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.3"	""	"115.9"	""	"125.1"	""	"146.4"	""	"179.7"	"167.2"	""	"405"	"24"	"33.000"	"26.000"	"0.0826846757323701"	"20"	"0.007412"	"0.09407"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEHLAK"	"[K].vDEHLAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"423.92349"	"1269.75592"	"1269.75671"	"-0.62"	"-0.00026"	"6/50"	"6"	"50"	"24373406.567749"	"HCD"	"MS2"	"29.19246"	"734.0"	"63.542"	"37.6094"	"10292"	"10292"	"10273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"687.9"	""	"750.4"	""	"863.3"	""	"1314.8"	""	"1664.5"	"1719.1"	""	"405"	"25"	"33.000"	"26.000"	"0.0703760726922491"	"24"	"0.002559"	"0.02588"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"635.38861"	"1269.76995"	"1269.77280"	"-2.25"	"-0.00143"	"10/80"	"10"	"80"	"1052374.22406006"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"77.4864"	"26472"	"26472"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.3"	""	"65.6"	""	"63.0"	""	"89.0"	""	"94.6"	"103.7"	""	"377"	"29"	"32.000"	"25.000"	"0.0221468189106101"	"23"	"0.004672"	"0.05494"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"635.38934"	"1269.77141"	"1269.77280"	"-1.10"	"-0.00070"	"5/80"	"5"	"80"	"9789482.18780518"	"HCD"	"MS2"	"2.192545"	"366.5"	"100.000"	"71.9710"	"24240"	"24240"	"24223"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"532.4"	""	"440.4"	""	"552.1"	""	"613.7"	""	"645.8"	"688.1"	""	"368"	"37"	"32.000"	"25.000"	"0.00373953690012264"	"20"	"9.9E-05"	"0.0006156"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"635.38940"	"1269.77153"	"1269.77280"	"-1.00"	"-0.00064"	"5/80"	"5"	"80"	"703132.783325195"	"HCD"	"MS2"	"43.29221"	"44.0"	"100.000"	"71.6769"	"24120"	"24120"	"24100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.0"	""	"61.2"	""	"66.9"	""	"63.9"	"0.0"	"74.8"	"79.4"	""	"368"	"28"	"32.000"	"25.000"	"0.0264130055737072"	"17"	"0.0009352"	"0.008163"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"635.38947"	"1269.77165"	"1269.77280"	"-0.90"	"-0.00057"	"5/80"	"5"	"80"	"1538922.73382568"	"HCD"	"MS2"	"12.76089"	"73.6"	"100.000"	"78.3907"	"26839"	"26839"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.9"	""	"77.7"	""	"108.4"	""	"118.3"	""	"144.5"	"150.6"	""	"368"	"20"	"32.000"	"25.000"	"0.187420815401957"	"21"	"0.006343"	"0.07899"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"635.38959"	"1269.77190"	"1269.77280"	"-0.71"	"-0.00045"	"12/80"	"12"	"80"	"800503.633544922"	"HCD"	"MS2"	"45.98518"	"39.2"	"100.000"	"71.0637"	"23902"	"23902"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.0"	""	"53.9"	""	"55.7"	""	"56.2"	""	"67.1"	"73.7"	""	"373"	"22"	"32.000"	"25.000"	"0.126089474910605"	"16"	"0.0008247"	"0.007583"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"635.38959"	"1269.77190"	"1269.77280"	"-0.71"	"-0.00045"	"5/80"	"5"	"80"	"12754462.5874023"	"HCD"	"MS2"	"0"	"461.0"	"93.465"	"72.1235"	"24329"	"24329"	"24313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"646.5"	""	"574.6"	""	"676.3"	""	"791.4"	""	"827.3"	"853.0"	""	"373"	"34"	"32.000"	"25.000"	"0.00717263673514585"	"19"	"0"	"0.0003672"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"635.38965"	"1269.77202"	"1269.77280"	"-0.62"	"-0.00039"	"10/80"	"10"	"80"	"7970116.2166748"	"HCD"	"MS2"	"0.3653472"	"300.8"	"100.000"	"77.7967"	"26598"	"26598"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"429.8"	""	"350.7"	""	"430.2"	""	"515.1"	""	"558.8"	"568.9"	""	"373"	"30"	"32.000"	"25.000"	"0.0192610002174501"	""	"0.000885"	"0.007807"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"635.38965"	"1269.77202"	"1269.77280"	"-0.62"	"-0.00039"	"5/80"	"5"	"80"	"13984800.5836792"	"HCD"	"MS2"	"1.049906"	"312.0"	"59.889"	"72.4205"	"24449"	"24449"	"24432"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"452.8"	""	"362.2"	""	"446.2"	""	"522.7"	""	"572.6"	"600.0"	""	"373"	"37"	"32.000"	"25.000"	"0.00372116421741696"	"20"	"9.9E-05"	"0.0006878"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"635.38971"	"1269.77214"	"1269.77280"	"-0.52"	"-0.00033"	"10/80"	"10"	"80"	"2239765.86065674"	"HCD"	"MS2"	"6.123057"	"94.1"	"100.000"	"78.4439"	"26888"	"26888"	"26871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.4"	""	"105.9"	""	"136.1"	""	"161.4"	""	"193.6"	"185.3"	""	"373"	"30"	"32.000"	"25.000"	"0.0208775165266624"	"23"	"0.00714"	"0.09137"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"635.38971"	"1269.77214"	"1269.77280"	"-0.52"	"-0.00033"	"10/80"	"10"	"80"	"8969589.04901123"	"HCD"	"MS2"	"0"	"263.2"	"77.297"	"78.0753"	"26711"	"26711"	"26698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"383.1"	""	"288.6"	""	"377.4"	""	"452.3"	""	"505.3"	"491.2"	""	"373"	"30"	"32.000"	"25.000"	"0.0191725039600588"	""	"0.0009352"	"0.008386"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.38977"	"1269.77226"	"1269.77280"	"-0.42"	"-0.00027"	"11/80"	"11"	"80"	"2607922.45068359"	"HCD"	"MS2"	"3.325421"	"110.9"	"100.000"	"70.4322"	"23647"	"23647"	"23632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.4"	""	"160.6"	""	"148.7"	""	"142.7"	"0.0"	"196.4"	"220.3"	""	"373"	"25"	"32.000"	"25.000"	"0.0649649092542163"	"14"	"0.002189"	"0.02073"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"635.38977"	"1269.77226"	"1269.77280"	"-0.42"	"-0.00027"	"7/80"	"7"	"80"	"3818178.94189453"	"HCD"	"MS2"	"6.24516"	"153.2"	"100.000"	"70.7366"	"23771"	"23771"	"23757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"231.9"	""	"212.6"	""	"205.9"	""	"216.6"	"4.9"	"276.5"	"303.5"	""	"373"	"30"	"32.000"	"25.000"	"0.0185216143030504"	"22"	"0.001615"	"0.01382"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"635.38977"	"1269.77226"	"1269.77280"	"-0.42"	"-0.00027"	"10/80"	"10"	"80"	"7795388.40393066"	"HCD"	"MS2"	"0"	"288.6"	"100.000"	"77.8703"	"26655"	"26655"	"26641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.8"	""	"335.9"	""	"407.7"	""	"509.0"	""	"539.5"	"545.0"	""	"373"	"30"	"32.000"	"25.000"	"0.0194840320884679"	""	"0.0009352"	"0.008017"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"635.38983"	"1269.77239"	"1269.77280"	"-0.33"	"-0.00021"	"5/80"	"5"	"80"	"2358679.73034668"	"HCD"	"MS2"	"1.111121"	"102.0"	"100.000"	"72.7169"	"24569"	"24569"	"24552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.3"	"2.7"	"116.5"	""	"151.4"	""	"176.9"	"1.6"	"187.6"	"183.5"	""	"373"	"37"	"32.000"	"25.000"	"0.00379034582539606"	"20"	"0.0001991"	"0.003923"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"635.38983"	"1269.77239"	"1269.77280"	"-0.33"	"-0.00021"	"5/80"	"5"	"80"	"15446894.7629395"	"HCD"	"MS2"	"0.7387753"	"344.9"	"56.874"	"72.2569"	"24353"	"24353"	"24336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.9"	""	"405.7"	""	"510.3"	""	"561.1"	"0.6"	"654.6"	"648.5"	""	"373"	"37"	"32.000"	"25.000"	"0.00371260577721111"	"20"	"9.9E-05"	"0.000717"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"635.38995"	"1269.77263"	"1269.77280"	"-0.14"	"-0.00009"	"10/80"	"10"	"80"	"9662757.753479"	"HCD"	"MS2"	"0"	"355.9"	"96.148"	"78.1444"	"26766"	"26766"	"26751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"494.5"	""	"382.6"	""	"504.5"	""	"613.2"	""	"696.2"	"690.0"	""	"387"	"30"	"32.000"	"25.000"	"0.0200300009252453"	""	"0.0001991"	"0.005946"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.39001"	"1269.77275"	"1269.77280"	"-0.04"	"-0.00002"	"12/80"	"12"	"80"	"1097130.66375732"	"HCD"	"MS2"	"8.725558"	"56.5"	"100.000"	"70.2301"	"23532"	"23532"	"23512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.1"	""	"88.6"	""	"76.4"	""	"75.9"	""	"91.3"	"115.8"	""	"387"	"21"	"32.000"	"25.000"	"0.167371292283097"	"14"	"0.006267"	"0.07727"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.39008"	"1269.77287"	"1269.77280"	"0.06"	"0.00004"	"5/80"	"5"	"80"	"1168226.53643799"	"HCD"	"MS2"	"35.37455"	"59.5"	"100.000"	"71.8167"	"24208"	"24208"	"24187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.5"	""	"77.1"	""	"86.1"	""	"91.1"	""	"107.6"	"111.0"	""	"387"	"32"	"32.000"	"25.000"	"0.0119861848027357"	"15"	"0.001453"	"0.01163"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"635.39008"	"1269.77287"	"1269.77280"	"0.06"	"0.00004"	"8/80"	"8"	"80"	"1885031.17138672"	"HCD"	"MS2"	"23.84398"	"80.0"	"100.000"	"70.8129"	"23768"	"23768"	"23754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.8"	""	"107.3"	""	"114.8"	""	"124.0"	"0.5"	"131.8"	"169.0"	""	"387"	"30"	"32.000"	"25.000"	"0.0178106992134239"	"19"	"0.001348"	"0.01138"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINTPEVVR"	"[K].iINTPEVVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"635.39020"	"1269.77312"	"1269.77280"	"0.25"	"0.00016"	"5/80"	"5"	"80"	"3186387.44555664"	"HCD"	"MS2"	"0.6010859"	"129.0"	"100.000"	"72.5770"	"24482"	"24482"	"24464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.6"	""	"154.0"	""	"192.0"	""	"202.3"	"0.9"	"234.7"	"257.2"	""	"356"	"30"	"32.000"	"25.000"	"0.0163463202174077"	"16"	"0.001348"	"0.01053"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVNTPEVIR"	"[K].iVNTPEVIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"635.39038"	"1269.77349"	"1269.77280"	"0.54"	"0.00034"	"11/80"	"11"	"80"	"4298297.83795166"	"HCD"	"MS2"	"3.568289"	"173.8"	"100.000"	"70.5321"	"23655"	"23655"	"23638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"279.7"	""	"252.3"	""	"229.6"	""	"235.8"	"5.3"	"307.2"	"336.3"	""	"356"	"27"	"32.000"	"25.000"	"0.0355975412794629"	"18"	"0.008792"	"0.112"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EHTALLK"	"[R].eHTALLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"423.93539"	"1269.79163"	"1269.79309"	"-1.15"	"-0.00049"	"10/52"	"10"	"52"	"16925029.1702881"	"HCD"	"MS2"	"18.30889"	"402.0"	"56.944"	"36.0051"	"9680"	"9680"	"9665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"524.7"	""	"504.5"	""	"584.5"	""	"668.8"	""	"792.8"	"737.3"	""	"276"	"26"	"31.000"	"24.000"	"0.0324249329277067"	"23"	"0.001488"	"0.01253"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHTALLK"	"[R].eHTALLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.0938"	"0.0000"	"1"	"1"	"1"	"423.93561"	"1269.79227"	"1269.79309"	"-0.65"	"-0.00027"	"9/52"	"9"	"52"	"14647090.8926392"	"HCD"	"MS2"	"20.95254"	"451.6"	"75.646"	"36.1127"	"9687"	"9687"	"9675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"585.5"	""	"587.8"	""	"664.8"	""	"742.5"	"4.5"	"874.1"	"821.8"	""	"275"	"32"	"31.000"	"24.000"	"0.00938215704444796"	""	"0.001049"	"0.008891"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFFLANASR"	"[R].dFFLAnASR.[A]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.83600"	"1270.66472"	"1270.66292"	"1.42"	"0.00090"	"9/84"	"9"	"84"	"207342.441833496"	"HCD"	"MS2"	"53.71522"	"13.8"	"100.000"	"94.0801"	"33202"	"33202"	"33174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"15.7"	""	"20.4"	""	"20.5"	""	"22.8"	"28.0"	""	"607"	"3"	"34.000"	"27.000"	"14.6946313561774"	"13"	"0.007412"	"0.09365"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYHLPINR"	"[K].eYHLPINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"424.24100"	"1270.70844"	"1270.71054"	"-1.65"	"-0.00070"	"6/58"	"6"	"58"	"3044953.53076172"	"HCD"	"MS2"	"43.71636"	"50.5"	"100.000"	"45.4122"	"13460"	"13460"	"13440"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.4"	""	"60.8"	""	"67.3"	""	"88.2"	""	"97.5"	"89.1"	""	"563"	"25"	"34.000"	"27.000"	"0.0913016022838417"	"21"	"0.0001991"	"0.004681"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYHLPINR"	"[K].eYHLPINR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"424.24170"	"1270.71054"	"1270.71054"	"0.01"	"0.00000"	"7/58"	"7"	"58"	"3396737.29071045"	"HCD"	"MS2"	"47.08957"	"57.8"	"100.000"	"45.1488"	"13387"	"13387"	"13360"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.4"	""	"74.5"	""	"74.8"	""	"99.9"	"0.3"	"115.1"	"102.4"	""	"543"	"35"	"34.000"	"27.000"	"0.00812399848839124"	"26"	"0.0001991"	"0.002989"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEELEGVR"	"[R].iPEELEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"635.86316"	"1270.71904"	"1270.72043"	"-1.09"	"-0.00070"	"13/70"	"13"	"70"	"781397.100402832"	"HCD"	"MS2"	"13.71885"	"31.3"	"100.000"	"81.1679"	"27995"	"27995"	"27976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"32.9"	""	"36.2"	""	"53.9"	"2.1"	"71.0"	"59.8"	""	"545"	"23"	"34.000"	"27.000"	"0.146678515735688"	"15"	"0.0001991"	"0.005746"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEELEGVR"	"[R].iPEELEGVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.86395"	"1270.72063"	"1270.72043"	"0.15"	"0.00010"	"13/70"	"13"	"70"	"768952.80682373"	"HCD"	"MS2"	"8.055093"	"30.5"	"100.000"	"81.0322"	"27913"	"27913"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.7"	""	"41.0"	""	"32.6"	""	"50.8"	""	"62.6"	"63.8"	""	"546"	"18"	"34.000"	"27.000"	"0.418950436304207"	"14"	"0.001718"	"0.01524"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPELVER"	"[K].wLPELVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"635.87103"	"1270.73479"	"1270.73569"	"-0.71"	"-0.00045"	"7/62"	"7"	"62"	"1647157.58947754"	"HCD"	"MS2"	"18.03332"	"78.5"	"100.000"	"110.6512"	"39771"	"39771"	"39751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.0"	""	"111.1"	""	"101.7"	""	"131.0"	""	"142.8"	"155.9"	""	"532"	"25"	"34.000"	"27.000"	"0.0827716545670201"	"19"	"0.0001991"	"0.002354"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLPELVER"	"[K].wLPELVER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"635.87122"	"1270.73516"	"1270.73569"	"-0.42"	"-0.00027"	"10/62"	"10"	"62"	"1549525.25628662"	"HCD"	"MS2"	"15.53629"	"76.3"	"100.000"	"110.7828"	"39838"	"39838"	"39820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.5"	""	"101.6"	""	"98.6"	""	"128.9"	""	"136.9"	"155.4"	""	"533"	"31"	"34.000"	"27.000"	"0.0194400426482842"	"20"	"0.003818"	"0.04164"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQHEAK"	"[R].iSQHEAk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"635.87787"	"1270.74846"	"1270.75196"	"-2.75"	"-0.00175"	"10/62"	"10"	"62"	"192905.852905273"	"HCD"	"MS2"	"26.09621"	"19.6"	"100.000"	"23.8016"	"4784"	"4784"	"4756"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.2"	""	"26.7"	""	"19.7"	""	"37.9"	""	"39.0"	"36.9"	""	"473"	"13"	"33.000"	"26.000"	"1.0588419643771"	"18"	"0.002628"	"0.02728"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLLDIVER"	"[K].sPLLDIVER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"635.88171"	"1270.75615"	"1270.75682"	"-0.52"	"-0.00033"	"11/78"	"11"	"78"	"1928739.52362061"	"HCD"	"MS2"	"12.9605"	"69.5"	"100.000"	"104.3016"	"37319"	"37319"	"37301"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.3"	""	"92.0"	""	"101.9"	""	"121.3"	""	"123.3"	"133.1"	""	"461"	"40"	"33.000"	"26.000"	"0.00256844889992894"	"21"	"0"	"0.0001809"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLLDIVER"	"[K].sPLLDIVER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.88196"	"1270.75664"	"1270.75682"	"-0.14"	"-0.00009"	"12/78"	"12"	"78"	"976811.391601563"	"HCD"	"MS2"	"26.85288"	"28.5"	"100.000"	"104.5885"	"37434"	"37434"	"37422"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"31.4"	""	"45.6"	""	"50.0"	"0.2"	"50.6"	"62.3"	""	"462"	"22"	"33.000"	"26.000"	"0.130200298495795"	"14"	"0.0001991"	"0.003673"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLLDIVER"	"[K].sPLLDIVER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"635.88202"	"1270.75676"	"1270.75682"	"-0.04"	"-0.00003"	"13/78"	"13"	"78"	"1959911.67034912"	"HCD"	"MS2"	"10.89986"	"75.0"	"100.000"	"104.0664"	"37207"	"37207"	"37191"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.7"	""	"87.8"	""	"105.4"	""	"129.0"	"1.5"	"142.5"	"141.8"	""	"462"	"36"	"33.000"	"26.000"	"0.00573603747323277"	"20"	"0"	"8.883E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLLDIVER"	"[K].sPLLDIVER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"635.88226"	"1270.75725"	"1270.75682"	"0.34"	"0.00022"	"13/78"	"13"	"78"	"1106523.43109131"	"HCD"	"MS2"	"25.96437"	"45.0"	"100.000"	"104.3301"	"37312"	"37312"	"37307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.6"	""	"50.1"	""	"61.3"	""	"82.5"	"0.9"	"81.7"	"93.4"	""	"427"	"28"	"33.000"	"26.000"	"0.0316517611178661"	"16"	"0.0001686"	"0.001732"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSMADK"	"[R].dFSMADk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"636.33801"	"1271.66875"	"1271.67059"	"-1.45"	"-0.00092"	"6/58"	"6"	"58"	"1372746.17156982"	"HCD"	"MS2"	"41.87996"	"111.0"	"100.000"	"64.2886"	"21120"	"21120"	"21101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.3"	""	"138.1"	""	"163.9"	""	"133.9"	"0.3"	"214.9"	"219.9"	""	"504"	"20"	"34.000"	"27.000"	"0.230887563510744"	"15"	"0.001488"	"0.0124"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSMADK"	"[R].dFSMADk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"636.33820"	"1271.66911"	"1271.67059"	"-1.16"	"-0.00074"	"6/58"	"6"	"58"	"1289046.81793213"	"HCD"	"MS2"	"23.43721"	"114.8"	"100.000"	"64.3263"	"21168"	"21168"	"21153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.8"	""	"150.1"	""	"160.5"	""	"125.8"	""	"236.5"	"226.5"	""	"509"	"28"	"34.000"	"27.000"	"0.0416569804703377"	"22"	"0.0007633"	"0.007455"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSMADK"	"[R].dFSMADk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"636.33929"	"1271.67131"	"1271.67059"	"0.56"	"0.00036"	"6/58"	"6"	"58"	"930196.609436035"	"HCD"	"MS2"	"20.25023"	"80.2"	"100.000"	"64.5894"	"21242"	"21242"	"21217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.3"	""	"106.6"	""	"113.3"	""	"102.5"	"2.6"	"161.7"	"149.7"	""	"535"	"15"	"34.000"	"27.000"	"0.800430790292691"	"21"	"0.002373"	"0.02248"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLESDYFR"	"[K].lLESDYFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"636.34479"	"1271.68230"	"1271.68332"	"-0.80"	"-0.00051"	"11/60"	"11"	"60"	"1065616.61450195"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"99.5391"	"35405"	"35405"	"35385"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.8"	""	"73.4"	""	"86.6"	""	"94.1"	"0.9"	"105.1"	"98.9"	""	"593"	"37"	"34.000"	"27.000"	"0.00597069240084198"	"20"	"0.0001686"	"0.001348"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLESDYFR"	"[K].lLESDYFR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"636.34552"	"1271.68376"	"1271.68332"	"0.35"	"0.00022"	"6/60"	"6"	"60"	"1131796.07000732"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"99.4845"	"35354"	"35354"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.9"	""	"81.8"	""	"85.3"	""	"93.1"	"0.2"	"105.3"	"113.0"	""	"598"	"32"	"34.000"	"27.000"	"0.0168916155468878"	"19"	"0.0001991"	"0.002031"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"636.37085"	"1271.73442"	"1271.73597"	"-1.22"	"-0.00077"	"6/52"	"6"	"52"	"821869.51361084"	"HCD"	"MS2"	"0"	"62.9"	"100.000"	"25.8002"	"5592"	"5592"	"5562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.7"	""	"70.5"	""	"83.9"	""	"121.9"	""	"111.4"	"118.8"	""	"568"	"34"	"34.000"	"27.000"	"0.0112025873789379"	"24"	"0.002035"	"0.01841"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.5897"	"0.0000"	"1"	"1"	"1"	"424.58307"	"1271.73465"	"1271.73597"	"-1.04"	"-0.00044"	"6/52"	"6"	"52"	"24638210.8167725"	"HCD"	"MS2"	"31.67888"	"617.5"	"49.579"	"25.8441"	"5609"	"5609"	"5593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"878.0"	""	"776.2"	""	"781.2"	""	"1087.7"	""	"1138.3"	"1195.1"	""	"557"	"39"	"34.000"	"27.000"	"0.00391584235470181"	""	"0.001488"	"0.01283"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	"0.5517"	"0.0000"	"1"	"1"	"1"	"424.58328"	"1271.73529"	"1271.73597"	"-0.53"	"-0.00023"	"6/52"	"6"	"52"	"23139696.0819092"	"HCD"	"MS2"	"24.25443"	"664.5"	"55.653"	"26.0296"	"5645"	"5645"	"5627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"962.0"	""	"805.0"	""	"833.7"	""	"1150.7"	""	"1227.4"	"1331.3"	""	"556"	"29"	"34.000"	"27.000"	"0.032964371199047"	"27"	"0.002588"	"0.02633"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEEHLK"	"[R].aSEEHLk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"636.37268"	"1271.73808"	"1271.73597"	"1.66"	"0.00106"	"6/52"	"6"	"52"	"592065.756347656"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"25.9768"	"5624"	"5624"	"5599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.0"	""	"53.1"	""	"52.9"	""	"89.6"	""	"93.3"	"99.2"	""	"608"	"34"	"34.000"	"27.000"	"0.0124702047307929"	"23"	"0.001615"	"0.01438"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLQIDNAR"	"[KR].iVLQIDnAR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"2"	"2"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"636.37817"	"1271.74907"	"1271.75207"	"-2.36"	"-0.00150"	"10/74"	"10"	"74"	"210996.590332031"	"HCD"	"MS2"	"40.62831"	"11.1"	"100.000"	"88.6539"	"30979"	"30979"	"30951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"11.4"	""	"19.7"	""	"18.3"	""	"16.9"	"19.2"	""	"546"	"15"	"34.000"	"27.000"	"0.815009454964602"	"19"	"0.002525"	"0.02442"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"636.37909"	"1271.75090"	"1271.75207"	"-0.92"	"-0.00058"	"7/76"	"7"	"76"	"1871902.5201416"	"HCD"	"MS2"	"18.4562"	"88.0"	"100.000"	"72.7222"	"24541"	"24541"	"24523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.0"	""	"137.4"	""	"139.7"	""	"114.2"	""	"149.3"	"171.4"	""	"567"	"43"	"34.000"	"27.000"	"0.00131993657513759"	""	"0"	"0.0002789"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQTPLTDR"	"[K].lVQTPLTDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"636.37933"	"1271.75139"	"1271.75207"	"-0.53"	"-0.00034"	"7/84"	"7"	"84"	"2457096.65093994"	"HCD"	"MS2"	"0"	"101.4"	"100.000"	"67.2596"	"22357"	"22357"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.0"	""	"118.6"	""	"120.3"	""	"176.3"	"3.5"	"203.2"	"193.5"	""	"565"	"37"	"34.000"	"27.000"	"0.00605366594816418"	"26"	"9.9E-05"	"0.0006665"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"636.37952"	"1271.75176"	"1271.75207"	"-0.24"	"-0.00016"	"8/76"	"8"	"76"	"2044398.00720215"	"HCD"	"MS2"	"22.91622"	"95.5"	"100.000"	"72.8482"	"24622"	"24622"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.2"	""	"138.4"	""	"154.6"	""	"124.8"	"1.6"	"157.7"	"188.0"	""	"571"	"46"	"34.000"	"27.000"	"0.000750941511686133"	""	"0"	"9.946E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLQIDNAR"	"[KR].iVLQIDnAR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"2"	"2"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2;Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q63279; Q5BJY9"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2; Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"636.37964"	"1271.75200"	"1271.75207"	"-0.05"	"-0.00003"	"9/74"	"9"	"74"	"224650.720458984"	"HCD"	"MS2"	"47.38653"	"10.8"	"100.000"	"88.6042"	"30998"	"30998"	"30978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"14.6"	""	"13.2"	""	"17.0"	""	"20.4"	"26.2"	""	"586"	"13"	"34.000"	"27.000"	"1.38952901681252"	"19"	"0.002189"	"0.02091"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQTPLTDR"	"[K].lVQTPLTDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"636.37964"	"1271.75200"	"1271.75207"	"-0.05"	"-0.00003"	"6/84"	"6"	"84"	"2666363.97283936"	"HCD"	"MS2"	"8.801587"	"113.6"	"100.000"	"67.5477"	"22474"	"22474"	"22457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.2"	""	"135.8"	""	"136.4"	""	"205.6"	""	"223.6"	"237.4"	""	"586"	"33"	"34.000"	"27.000"	"0.016064515072181"	"27"	"0.0007633"	"0.007364"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"636.37970"	"1271.75212"	"1271.75207"	"0.04"	"0.00003"	"7/76"	"7"	"76"	"935630.720581055"	"HCD"	"MS2"	"11.99422"	"49.1"	"100.000"	"73.1548"	"24747"	"24747"	"24728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.3"	""	"71.4"	""	"80.4"	""	"56.4"	"1.0"	"83.2"	"99.2"	""	"586"	"40"	"34.000"	"27.000"	"0.00283052907544016"	"25"	"0"	"0.0001861"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQTPLTDR"	"[K].lVQTPLTDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"636.37970"	"1271.75212"	"1271.75207"	"0.04"	"0.00003"	"8/84"	"8"	"84"	"2090806.76586914"	"HCD"	"MS2"	"0"	"93.7"	"100.000"	"67.2240"	"22312"	"22312"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.5"	""	"107.0"	""	"124.1"	""	"170.2"	"4.0"	"177.4"	"183.0"	""	"586"	"38"	"34.000"	"27.000"	"0.00444495757665586"	"27"	"0"	"0.0003458"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAEQELIR"	"[R].lAAEQELIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5957"	"0.0000"	"1"	"1"	"1"	"636.37988"	"1271.75249"	"1271.75207"	"0.33"	"0.00021"	"8/76"	"8"	"76"	"1201295.54046631"	"HCD"	"MS2"	"13.22804"	"60.2"	"100.000"	"73.0338"	"24668"	"24668"	"24650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.3"	""	"89.8"	""	"87.8"	""	"85.1"	""	"109.9"	"117.9"	""	"549"	"47"	"34.000"	"27.000"	"0.000508794430627365"	""	"0"	"5.187E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"636.38873"	"1271.77019"	"1271.77236"	"-1.71"	"-0.00108"	"7/70"	"7"	"70"	"2310326.70794678"	"HCD"	"MS2"	"0"	"177.7"	"100.000"	"39.1937"	"10938"	"10938"	"10919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.0"	""	"239.4"	""	"237.8"	""	"246.5"	""	"305.3"	"383.8"	""	"446"	"36"	"33.000"	"26.000"	"0.00615608861937136"	"18"	"0.0001991"	"0.00241"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"636.38892"	"1271.77056"	"1271.77236"	"-1.42"	"-0.00090"	"6/70"	"6"	"70"	"2217706.18280029"	"HCD"	"MS2"	"0"	"168.7"	"100.000"	"39.0973"	"10934"	"10934"	"10922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.6"	""	"227.6"	""	"225.9"	""	"244.8"	""	"289.3"	"347.0"	""	"448"	"33"	"33.000"	"26.000"	"0.012112896833981"	"24"	"0.0001686"	"0.001959"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"636.38959"	"1271.77190"	"1271.77236"	"-0.36"	"-0.00023"	"7/70"	"7"	"70"	"57211159.6679688"	"HCD"	"MS2"	"0"	"585.9"	"14.957"	"38.8891"	"10814"	"10814"	"10797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"971.3"	""	"715.9"	""	"758.3"	""	"846.4"	""	"1020.3"	"1241.2"	""	"436"	"36"	"33.000"	"26.000"	"0.00526570461908997"	"19"	"0.001217"	"0.009473"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"636.38977"	"1271.77226"	"1271.77236"	"-0.07"	"-0.00005"	"7/70"	"7"	"70"	"49449332.3937988"	"HCD"	"MS2"	"0"	"656.6"	"19.236"	"38.8039"	"10815"	"10815"	"10800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1069.9"	""	"773.2"	""	"889.9"	""	"938.8"	""	"1158.5"	"1395.8"	""	"444"	"37"	"33.000"	"26.000"	"0.00489049674797867"	"18"	"0.0001991"	"0.005522"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"636.38983"	"1271.77239"	"1271.77236"	"0.02"	"0.00001"	"7/70"	"7"	"70"	"8470102.66235352"	"HCD"	"MS2"	"7.546803"	"565.8"	"100.000"	"38.5211"	"10699"	"10699"	"10676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"968.3"	""	"721.8"	""	"732.0"	""	"872.1"	""	"930.1"	"1138.1"	""	"444"	"38"	"33.000"	"26.000"	"0.00383136012021825"	"22"	"0.0001991"	"0.003252"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAAEGPLK"	"[K].qAAEGPLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"636.39001"	"1271.77275"	"1271.77236"	"0.31"	"0.00020"	"7/70"	"7"	"70"	"6928679.27685547"	"HCD"	"MS2"	"9.787505"	"462.6"	"100.000"	"38.6061"	"10698"	"10698"	"10670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"817.7"	""	"594.7"	""	"599.3"	""	"717.3"	""	"761.7"	"894.1"	""	"423"	"37"	"33.000"	"26.000"	"0.00470230041872772"	"21"	"0.0001991"	"0.00302"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPYYDSR"	"[R].eNPYYDSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"636.80603"	"1272.60478"	"1272.60580"	"-0.80"	"-0.00051"	"5/80"	"5"	"80"	"1406309.64379883"	"HCD"	"MS2"	"0"	"79.0"	"100.000"	"33.4668"	"8615"	"8615"	"8588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.9"	""	"94.4"	""	"107.5"	""	"119.9"	"1.6"	"147.4"	"146.5"	""	"271"	"32"	"31.000"	"24.000"	"0.00909786095714665"	"24"	"0.0001686"	"0.001777"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPYYDSR"	"[R].eNPYYDSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"636.80609"	"1272.60491"	"1272.60580"	"-0.70"	"-0.00045"	"5/80"	"5"	"80"	"1397509.99151611"	"HCD"	"MS2"	"8.775078"	"80.2"	"100.000"	"33.3447"	"8603"	"8603"	"8577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.9"	""	"97.3"	""	"92.2"	""	"125.4"	""	"161.8"	"156.1"	""	"271"	"30"	"31.000"	"24.000"	"0.0151334970074266"	"23"	"0.0001991"	"0.004708"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"424.88153"	"1272.63004"	"1272.63229"	"-1.77"	"-0.00075"	"8/68"	"8"	"68"	"65413211.9677734"	"HCD"	"MS2"	"14.41288"	"341.1"	"11.692"	"30.6885"	"7535"	"7535"	"7519"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"513.4"	""	"442.9"	""	"540.9"	""	"572.7"	""	"546.0"	"615.0"	""	"349"	"23"	"32.000"	"25.000"	"0.0905306067931038"	"24"	"0.007443"	"0.0948"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"424.88165"	"1272.63041"	"1272.63229"	"-1.48"	"-0.00063"	"8/68"	"8"	"68"	"62040879.4187012"	"HCD"	"MS2"	"12.89396"	"422.5"	"15.427"	"30.8200"	"7550"	"7550"	"7541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"655.6"	""	"536.0"	""	"650.5"	""	"719.1"	""	"700.1"	"746.2"	""	"347"	"23"	"32.000"	"25.000"	"0.090219305398565"	"24"	"0.008718"	"0.1104"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"636.81995"	"1272.63262"	"1272.63229"	"0.26"	"0.00016"	"5/68"	"5"	"68"	"2327443.52337646"	"HCD"	"MS2"	"0"	"104.2"	"100.000"	"30.7467"	"7521"	"7521"	"7508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.6"	""	"127.9"	""	"168.9"	""	"191.9"	"0.2"	"161.6"	"163.4"	""	"345"	"24"	"32.000"	"25.000"	"0.0643856522197617"	"21"	"0.002525"	"0.02405"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"636.82001"	"1272.63274"	"1272.63229"	"0.35"	"0.00023"	"6/68"	"6"	"68"	"1060547.58709717"	"HCD"	"MS2"	"0"	"57.1"	"100.000"	"30.3973"	"7423"	"7423"	"7399"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.2"	""	"75.5"	""	"84.3"	""	"105.6"	"0.9"	"86.9"	"94.3"	""	"345"	"31"	"32.000"	"25.000"	"0.0152682442695819"	"17"	"0.001615"	"0.01337"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHHWGYSK"	"[M].sHHWGYSk.[S]"	"N-Term(Prot)(Acetyl); K8(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"636.82013"	"1272.63298"	"1272.63229"	"0.55"	"0.00035"	"6/68"	"6"	"68"	"629066.257568359"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"30.4555"	"7406"	"7406"	"7381"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.3"	""	"49.4"	""	"56.6"	""	"70.0"	""	"57.0"	"58.1"	""	"360"	"28"	"32.000"	"25.000"	"0.0300796310575927"	"25"	"0.001103"	"0.009013"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSITEAMHR"	"[K].vSITEAMHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"424.90195"	"1272.69129"	"1272.69317"	"-1.48"	"-0.00063"	"10/70"	"10"	"70"	"2140326.97650146"	"HCD"	"MS2"	"8.335357"	"52.6"	"100.000"	"45.2998"	"13414"	"13414"	"13394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.5"	""	"81.4"	""	"66.6"	""	"83.3"	"1.4"	"89.8"	"101.4"	""	"697"	"23"	"35.000"	"28.000"	"0.176279894708085"	"21"	"0.0001991"	"0.004524"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSITEAMHR"	"[K].vSITEAMHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"424.90198"	"1272.69138"	"1272.69317"	"-1.41"	"-0.00060"	"10/70"	"10"	"70"	"4210482.58630371"	"HCD"	"MS2"	"14.40469"	"70.7"	"100.000"	"44.8040"	"13246"	"13246"	"13226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.8"	""	"106.6"	""	"105.0"	""	"100.7"	""	"126.5"	"126.3"	""	"697"	"41"	"35.000"	"28.000"	"0.00258942169557001"	"24"	"0.0001686"	"0.001443"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSITEAMHR"	"[K].vSITEAMHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"424.90256"	"1272.69312"	"1272.69317"	"-0.04"	"-0.00002"	"11/70"	"11"	"70"	"2836435.18914795"	"HCD"	"MS2"	"57.48297"	"60.1"	"100.000"	"44.9778"	"13283"	"13283"	"13266"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.1"	""	"78.6"	""	"85.1"	""	"97.9"	""	"115.0"	"111.7"	""	"702"	"36"	"35.000"	"28.000"	"0.00794890151965163"	"24"	"0.0001686"	"0.001591"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"636.85883"	"1272.71037"	"1272.71093"	"-0.44"	"-0.00028"	"8/82"	"8"	"82"	"2490413.56140137"	"HCD"	"MS2"	"32.27274"	"126.7"	"100.000"	"61.2771"	"19933"	"19933"	"19916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.0"	""	"157.0"	""	"178.8"	""	"198.0"	""	"238.6"	"250.7"	""	"707"	"46"	"35.000"	"28.000"	"0.000917042404509001"	"27"	"0"	"0.0001963"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"636.85883"	"1272.71037"	"1272.71093"	"-0.44"	"-0.00028"	"8/82"	"8"	"82"	"5780558.26507568"	"HCD"	"MS2"	"23.65495"	"262.2"	"100.000"	"61.5803"	"20055"	"20055"	"20038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"369.7"	""	"332.2"	""	"375.1"	""	"407.5"	""	"490.1"	"513.2"	""	"707"	"41"	"35.000"	"28.000"	"0.00256088111886509"	"25"	"0"	"0.0003794"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"636.85919"	"1272.71111"	"1272.71093"	"0.14"	"0.00009"	"8/82"	"8"	"82"	"5559160.46142578"	"HCD"	"MS2"	"23.66946"	"255.3"	"100.000"	"61.6589"	"20054"	"20054"	"20037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"357.8"	""	"309.2"	""	"374.4"	""	"423.5"	""	"482.1"	"478.3"	""	"757"	"41"	"35.000"	"28.000"	"0.00274831104889206"	"28"	"9.9E-05"	"0.0004774"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGNQDLIR"	"[K].lDGNQDLIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"636.85950"	"1272.71172"	"1272.71093"	"0.62"	"0.00039"	"7/82"	"7"	"82"	"2369011.92132568"	"HCD"	"MS2"	"34.37075"	"129.6"	"100.000"	"61.3532"	"19933"	"19933"	"19912"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.8"	""	"164.6"	""	"163.4"	""	"204.4"	""	"255.6"	"254.7"	""	"745"	"43"	"35.000"	"28.000"	"0.00205175866911012"	"26"	"0"	"8.535E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGNQSLQAGR"	"[K].lGNQSLQAGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"Q6GQP4"	"Ras-related protein Rab-31 OS=Rattus norvegicus OX=10116 GN=Rab31 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"636.86383"	"1272.72038"	"1272.72216"	"-1.40"	"-0.00089"	"7/86"	"7"	"86"	"968539.987060547"	"HCD"	"MS2"	"26.56178"	"67.0"	"100.000"	"37.6545"	"10345"	"10345"	"10328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.8"	""	"78.3"	""	"70.7"	""	"108.3"	""	"166.2"	"139.1"	""	"689"	"24"	"35.000"	"28.000"	"0.13402605245053"	"19"	"0.0001686"	"0.001292"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVESHTK"	"[R].nVESHTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"636.86865"	"1272.73003"	"1272.73122"	"-0.94"	"-0.00060"	"6/66"	"6"	"66"	"675177.667236328"	"HCD"	"MS2"	"0"	"55.0"	"100.000"	"20.4501"	"3491"	"3491"	"3478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.6"	""	"58.7"	""	"55.6"	""	"101.6"	""	"122.6"	"118.6"	""	"715"	"35"	"35.000"	"28.000"	"0.0121416034951071"	"20"	"0.0003938"	"0.00631"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVESHTK"	"[R].nVESHTk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"636.86920"	"1272.73113"	"1272.73122"	"-0.07"	"-0.00005"	"6/66"	"6"	"66"	"766587.309875488"	"HCD"	"MS2"	"0"	"62.0"	"100.000"	"20.4945"	"3471"	"3471"	"3454"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.4"	""	"68.5"	""	"74.0"	""	"115.3"	"1.5"	"133.9"	"126.1"	""	"730"	"35"	"35.000"	"28.000"	"0.0125687724728618"	"20"	"0.0001991"	"0.005627"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"636.87128"	"1272.73528"	"1272.73608"	"-0.63"	"-0.00040"	"7/88"	"7"	"88"	"1463768.91717529"	"HCD"	"MS2"	"12.51776"	"57.7"	"100.000"	"104.0318"	"37193"	"37193"	"37181"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.2"	""	"73.3"	""	"79.2"	""	"107.2"	"1.8"	"100.4"	"111.1"	""	"780"	"29"	"35.000"	"28.000"	"0.0542081526173207"	"21"	"0.0001991"	"0.002775"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"636.87140"	"1272.73552"	"1272.73608"	"-0.44"	"-0.00028"	"6/88"	"6"	"88"	"1364652.54602051"	"HCD"	"MS2"	"38.96758"	"50.7"	"100.000"	"103.6942"	"37073"	"37073"	"37054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"73.2"	""	"75.3"	""	"93.6"	""	"93.3"	"86.7"	""	"777"	"40"	"35.000"	"28.000"	"0.00377912296437351"	"17"	"0"	"0.0001838"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"636.87170"	"1272.73613"	"1272.73608"	"0.04"	"0.00002"	"7/88"	"7"	"88"	"9575468.08129883"	"HCD"	"MS2"	"0"	"244.9"	"81.188"	"103.7570"	"37083"	"37083"	"37074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"310.7"	""	"339.4"	""	"360.8"	""	"419.6"	""	"428.3"	"462.3"	""	"787"	"63"	"35.000"	"28.000"	"2.05090118819849E-05"	"21"	"0"	"4.583E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8676"	"0.0000"	"1"	"1"	"1"	"636.87195"	"1272.73662"	"1272.73608"	"0.42"	"0.00027"	"7/88"	"7"	"88"	"9020985.4887085"	"HCD"	"MS2"	"0"	"297.2"	"100.000"	"103.9946"	"37196"	"37196"	"37182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"387.2"	""	"386.2"	""	"440.7"	""	"528.2"	""	"512.6"	"563.0"	""	"747"	"68"	"35.000"	"28.000"	"6.55074367437898E-06"	"25"	"0"	"0.0001581"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLNSLEAVk.[R]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"636.87207"	"1272.73686"	"1272.73608"	"0.61"	"0.00039"	"6/88"	"6"	"88"	"1546251.02215576"	"HCD"	"MS2"	"40.14481"	"54.1"	"100.000"	"103.4713"	"36967"	"36967"	"36946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.0"	""	"74.9"	""	"68.9"	""	"94.2"	""	"103.0"	"101.1"	""	"747"	"43"	"35.000"	"28.000"	"0.00188925511258163"	"23"	"0"	"0.0001396"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDADLK"	"[K].rPDADLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"424.92691"	"1272.76618"	"1272.76761"	"-1.12"	"-0.00048"	"5/64"	"5"	"64"	"9307223.51452637"	"HCD"	"MS2"	"17.60465"	"324.0"	"53.960"	"31.6831"	"7893"	"7893"	"7873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"427.2"	""	"382.2"	""	"416.2"	""	"540.3"	""	"652.4"	"662.1"	""	"664"	"27"	"35.000"	"28.000"	"0.0597225143822758"	"23"	"0.0001991"	"0.004238"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDADLK"	"[K].rPDADLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"424.92697"	"1272.76636"	"1272.76761"	"-0.98"	"-0.00042"	"6/64"	"6"	"64"	"13580764.2757568"	"HCD"	"MS2"	"14.17079"	"427.3"	"49.997"	"31.5133"	"7862"	"7862"	"7848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"527.2"	""	"532.8"	""	"561.5"	""	"711.0"	""	"831.6"	"892.6"	""	"654"	"19"	"35.000"	"28.000"	"0.423202040154145"	"26"	"0.002189"	"0.02056"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDADLK"	"[K].rPDADLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"424.92725"	"1272.76719"	"1272.76761"	"-0.33"	"-0.00014"	"6/64"	"6"	"64"	"19737784.1412354"	"HCD"	"MS2"	"17.79749"	"1088.6"	"100.000"	"31.3894"	"7774"	"7774"	"7754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1397.8"	""	"1334.2"	""	"1381.7"	""	"1887.9"	""	"2115.0"	"2225.4"	""	"653"	"19"	"35.000"	"28.000"	"0.444511688825132"	"26"	"0.001615"	"0.01353"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPDADLK"	"[K].rPDADLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"424.92728"	"1272.76728"	"1272.76761"	"-0.26"	"-0.00011"	"5/64"	"5"	"64"	"15678104.3029785"	"HCD"	"MS2"	"41.76952"	"901.0"	"99.575"	"31.2358"	"7750"	"7750"	"7728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1155.9"	""	"1156.1"	""	"1136.6"	""	"1562.7"	""	"1767.8"	"1769.8"	""	"657"	"19"	"35.000"	"28.000"	"0.374572055213844"	"26"	"0.0009352"	"0.008283"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSPLLIGSTK"	"[R].QSPLLIGSTk.[S]"	"K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.88971"	"1272.77214"	"1272.77247"	"-0.26"	"-0.00016"	"7/104"	"7"	"104"	"2231682.45391846"	"HCD"	"MS2"	"27.08574"	"54.5"	"100.000"	"102.2801"	"36489"	"36489"	"36472"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.9"	""	"68.3"	""	"84.1"	""	"86.5"	""	"78.8"	"108.7"	""	"681"	"44"	"35.000"	"28.000"	"0.00130052024221036"	"15"	"0.009514"	"0.1263"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPETIQK"	"[K].vPETIQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"3"	"424.93527"	"1272.79126"	"1272.79276"	"-1.17"	"-0.00050"	"5/52"	"5"	"52"	"722112.574829102"	"HCD"	"MS2"	"45.43174"	"44.0"	"100.000"	"55.6980"	"17639"	"17639"	"17608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.0"	""	"52.3"	""	"66.6"	""	"64.8"	""	"79.5"	"91.9"	""	"500"	"10"	"33.000"	"26.000"	"2.7475145985813"	"21"	"0.007342"	"0.09297"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPETIQK"	"[K].vPETIQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"636.89929"	"1272.79131"	"1272.79276"	"-1.14"	"-0.00073"	"5/52"	"5"	"52"	"1957371.59197998"	"HCD"	"MS2"	"16.40573"	"108.6"	"100.000"	"55.2703"	"17498"	"17498"	"17474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.7"	""	"144.3"	""	"146.8"	""	"184.9"	"5.0"	"191.1"	"197.6"	""	"500"	"31"	"33.000"	"26.000"	"0.0208420296154909"	"18"	"0.002035"	"0.01765"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPETIQK"	"[K].vPETIQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"636.89978"	"1272.79228"	"1272.79276"	"-0.37"	"-0.00024"	"6/52"	"6"	"52"	"1767017.78222656"	"HCD"	"MS2"	"17.9875"	"106.9"	"100.000"	"55.6499"	"17619"	"17619"	"17592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.5"	""	"142.4"	""	"156.2"	""	"174.0"	"4.8"	"184.0"	"187.1"	""	"491"	"31"	"33.000"	"26.000"	"0.0191889626026435"	"24"	"0.007069"	"0.0899"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQMPDGIR"	"[K].dIQMPDGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"637.34137"	"1273.67546"	"1273.67719"	"-1.35"	"-0.00086"	"6/86"	"6"	"86"	"761377.117492676"	"HCD"	"MS2"	"23.37119"	"46.1"	"100.000"	"77.4894"	"26501"	"26501"	"26489"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.2"	""	"50.2"	""	"61.2"	""	"58.6"	""	"99.4"	"90.9"	""	"607"	"28"	"34.000"	"27.000"	"0.044684684448833"	"25"	"0.002525"	"0.02418"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQMPDGIR"	"[K].dIQMPDGIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"637.34143"	"1273.67558"	"1273.67719"	"-1.26"	"-0.00080"	"5/86"	"5"	"86"	"819697.540283203"	"HCD"	"MS2"	"43.42999"	"42.5"	"100.000"	"76.8678"	"26227"	"26227"	"26200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.8"	""	"51.7"	""	"59.0"	""	"57.4"	""	"82.0"	"88.6"	""	"607"	"26"	"34.000"	"27.000"	"0.0688903982546739"	"22"	"0.004234"	"0.04913"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEYDGK"	"[R].gFEYDGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"637.34369"	"1273.68010"	"1273.68287"	"-2.18"	"-0.00139"	"6/52"	"6"	"52"	"1185485.55126953"	"HCD"	"MS2"	"6.318713"	"99.7"	"100.000"	"58.0132"	"18572"	"18572"	"18550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.5"	""	"119.0"	""	"161.5"	""	"146.2"	""	"184.3"	"193.0"	""	"613"	"15"	"34.000"	"27.000"	"1.06519833482343"	"15"	"0.00455"	"0.05357"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEYDGK"	"[R].gFEYDGk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"637.34406"	"1273.68083"	"1273.68287"	"-1.60"	"-0.00102"	"9/52"	"9"	"52"	"1432831.5020752"	"HCD"	"MS2"	"7.33075"	"122.6"	"100.000"	"57.8311"	"18533"	"18533"	"18514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"184.0"	""	"160.0"	""	"178.4"	""	"189.4"	"0.3"	"211.4"	"237.0"	""	"686"	"20"	"35.000"	"28.000"	"0.381323982457586"	"21"	"0.003529"	"0.03879"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPAEAAK"	"[R].nDPAEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"637.36053"	"1273.71379"	"1273.71524"	"-1.13"	"-0.00072"	"7/76"	"7"	"76"	"1229010.58087158"	"HCD"	"MS2"	"22.66615"	"100.0"	"100.000"	"30.0081"	"7226"	"7226"	"7203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.8"	""	"112.6"	""	"142.5"	""	"164.1"	""	"203.3"	"200.4"	""	"803"	"48"	"36.000"	"29.000"	"0.000583022814461478"	"24"	"0"	"0.0003228"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPAEAAK"	"[R].nDPAEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"637.36078"	"1273.71428"	"1273.71524"	"-0.75"	"-0.00048"	"4/76"	"4"	"76"	"272587.405578613"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"30.1378"	"7318"	"7318"	"7295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.4"	""	"30.6"	""	"37.2"	""	"47.3"	""	"52.3"	"65.7"	""	"790"	"24"	"35.000"	"28.000"	"0.155810634319735"	"22"	"0.005956"	"0.07299"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDPAEAAK"	"[R].nDPAEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"637.36121"	"1273.71514"	"1273.71524"	"-0.08"	"-0.00005"	"7/76"	"7"	"76"	"1098129.26257324"	"HCD"	"MS2"	"0"	"90.0"	"100.000"	"29.8417"	"7199"	"7199"	"7174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.3"	""	"104.7"	""	"113.0"	""	"144.7"	"0.1"	"171.5"	"184.1"	""	"799"	"46"	"36.000"	"29.000"	"0.000951736628008798"	"26"	"0"	"0.0003071"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLnSLEAVk.[R]"	"N-Term(Prot)(Acetyl); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7049"	"0.0000"	"1"	"1"	"1"	"637.36359"	"1273.71990"	"1273.72010"	"-0.16"	"-0.00010"	"7/88"	"7"	"88"	"291545.643981934"	"HCD"	"MS2"	"28.34137"	"16.6"	"100.000"	"99.1255"	"35239"	"35239"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"21.3"	""	"20.3"	""	"24.6"	""	"32.4"	"34.2"	""	"865"	"61"	"36.000"	"29.000"	"3.25826281314833E-05"	""	"0.0001991"	"0.00239"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVK"	"[M].aGLnSLEAVk.[R]"	"N-Term(Prot)(Acetyl); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"637.36359"	"1273.71990"	"1273.72010"	"-0.16"	"-0.00010"	"7/88"	"7"	"88"	"310989.749145508"	"HCD"	"MS2"	"22.9071"	"17.7"	"100.000"	"99.0369"	"35173"	"35173"	"35160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"16.5"	""	"28.1"	""	"31.1"	""	"34.0"	"37.0"	""	"865"	"57"	"36.000"	"29.000"	"8.60966219111959E-05"	""	"0"	"0.0001026"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7424"	"0.0000"	"1"	"1"	"1"	"637.36859"	"1273.72991"	"1273.73133"	"-1.12"	"-0.00071"	"8/86"	"8"	"86"	"9726846.91729736"	"HCD"	"MS2"	"2.582469"	"361.1"	"100.000"	"66.6126"	"22064"	"22064"	"22051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"567.8"	""	"381.2"	""	"427.1"	""	"571.9"	""	"602.8"	"884.2"	""	"858"	"66"	"36.000"	"29.000"	"1.00105350871855E-05"	""	"0"	"8.45E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7121"	"0.0000"	"1"	"1"	"1"	"637.36859"	"1273.72991"	"1273.73133"	"-1.12"	"-0.00071"	"8/86"	"8"	"86"	"10439446.5316162"	"HCD"	"MS2"	"0.722529"	"396.3"	"100.000"	"66.6230"	"22101"	"22101"	"22096"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"622.4"	""	"407.8"	""	"457.5"	""	"636.6"	""	"674.5"	"961.0"	""	"858"	"66"	"36.000"	"29.000"	"1.00105350871855E-05"	""	"0"	"0.0001004"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"637.36865"	"1273.73003"	"1273.73133"	"-1.02"	"-0.00065"	"8/86"	"8"	"86"	"10605809.9887695"	"HCD"	"MS2"	"7.255012"	"306.2"	"72.507"	"66.8927"	"22177"	"22177"	"22164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"444.3"	""	"320.3"	""	"341.5"	""	"466.8"	""	"544.8"	"793.4"	""	"847"	"57"	"36.000"	"29.000"	"9.43742285715973E-05"	""	"0"	"0.0001347"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"637.36884"	"1273.73039"	"1273.73133"	"-0.74"	"-0.00047"	"8/86"	"8"	"86"	"8731157.13067627"	"HCD"	"MS2"	"8.755889"	"346.2"	"100.000"	"66.9234"	"22221"	"22221"	"22203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"511.1"	""	"343.2"	""	"403.8"	""	"548.1"	""	"615.1"	"871.3"	""	"846"	"63"	"36.000"	"29.000"	"2.01994882757203E-05"	""	"0"	"2.563E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QISLEDALR"	"[R].qISLEDALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"637.36896"	"1273.73064"	"1273.73133"	"-0.54"	"-0.00035"	"8/86"	"8"	"86"	"1795797.56591797"	"HCD"	"MS2"	"0"	"82.3"	"100.000"	"91.3463"	"32100"	"32100"	"32084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.5"	""	"88.7"	""	"92.5"	""	"147.6"	""	"167.9"	"163.9"	""	"841"	"54"	"36.000"	"29.000"	"0.000155155080198748"	""	"0"	"0.0001159"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QISLEDALR"	"[R].qISLEDALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"637.36902"	"1273.73076"	"1273.73133"	"-0.45"	"-0.00029"	"8/86"	"8"	"86"	"638377.20098877"	"HCD"	"MS2"	"30.85721"	"37.7"	"100.000"	"91.1528"	"31984"	"31984"	"31966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.5"	""	"44.2"	""	"47.2"	""	"57.5"	"0.7"	"71.8"	"72.4"	""	"841"	"45"	"36.000"	"29.000"	"0.00134823625095455"	"28"	"0"	"0.0002362"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"637.36914"	"1273.73100"	"1273.73133"	"-0.26"	"-0.00016"	"7/86"	"7"	"86"	"1673539.61889648"	"HCD"	"MS2"	"27.22573"	"89.4"	"100.000"	"67.1939"	"22299"	"22299"	"22282"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.3"	""	"113.3"	""	"103.2"	""	"139.1"	""	"171.6"	"205.1"	""	"879"	"44"	"36.000"	"29.000"	"0.00168639334393857"	""	"0"	"0.000112"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QISLEDALR"	"[R].qISLEDALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"637.36920"	"1273.73113"	"1273.73133"	"-0.16"	"-0.00010"	"7/86"	"7"	"86"	"576501.61907959"	"HCD"	"MS2"	"57.78098"	"32.4"	"100.000"	"91.0574"	"31983"	"31983"	"31967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"43.3"	""	"44.7"	""	"52.4"	"0.3"	"52.7"	"60.3"	""	"919"	"33"	"36.000"	"29.000"	"0.0242820593190695"	"21"	"9.9E-05"	"0.0009972"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QISLEDALR"	"[R].qISLEDALR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.5532"	"0.0000"	"1"	"1"	"1"	"637.36926"	"1273.73125"	"1273.73133"	"-0.06"	"-0.00004"	"14/86"	"14"	"86"	"1793037.74890137"	"HCD"	"MS2"	"0.9983232"	"85.6"	"100.000"	"91.4509"	"32106"	"32106"	"32089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"142.0"	""	"88.3"	""	"106.2"	""	"151.8"	"2.5"	"159.8"	"160.1"	""	"919"	"47"	"36.000"	"29.000"	"0.000980134137590852"	""	"0"	"0.0001941"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"637.36938"	"1273.73149"	"1273.73133"	"0.13"	"0.00008"	"8/86"	"8"	"86"	"1284554.27215576"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"66.3502"	"21993"	"21993"	"21980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.0"	""	"71.5"	""	"121.6"	""	"95.8"	"0.5"	"106.6"	"140.7"	""	"919"	"60"	"36.000"	"29.000"	"4.72373488989115E-05"	""	"0"	"4.836E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"637.36957"	"1273.73186"	"1273.73133"	"0.41"	"0.00026"	"7/86"	"7"	"86"	"1660700.92877197"	"HCD"	"MS2"	"26.02303"	"87.0"	"100.000"	"67.2134"	"22338"	"22338"	"22320"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.2"	""	"99.4"	""	"101.1"	""	"149.9"	""	"172.5"	"192.7"	""	"843"	"44"	"36.000"	"29.000"	"0.00168188996345643"	""	"0"	"0.0001051"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLLTADDR"	"[R].qLLLTADDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"637.37115"	"1273.73503"	"1273.73133"	"2.91"	"0.00185"	"8/86"	"8"	"86"	"1026047.33087158"	"HCD"	"MS2"	"38.00707"	"57.6"	"100.000"	"66.3261"	"21950"	"21950"	"21938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.3"	""	"57.3"	""	"118.3"	""	"81.9"	"2.5"	"95.2"	"108.2"	""	"872"	"49"	"36.000"	"29.000"	"0.000574759938010594"	"29"	"0"	"4.944E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALDGAK"	"[K].aVAALDGAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"637.39636"	"1273.78545"	"1273.78801"	"-2.01"	"-0.00128"	"8/64"	"8"	"64"	"992968.398132324"	"HCD"	"MS2"	"0"	"80.3"	"100.000"	"56.0348"	"17773"	"17773"	"17757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.8"	""	"93.5"	""	"95.2"	""	"130.2"	"2.4"	"149.6"	"154.1"	""	"628"	"38"	"34.000"	"27.000"	"0.00554535875695455"	"23"	"0"	"7.808E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAALDGAK"	"[K].aVAALDGAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"P18757"	"Cystathionine gamma-lyase OS=Rattus norvegicus OX=10116 GN=Cth PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"637.39642"	"1273.78557"	"1273.78801"	"-1.91"	"-0.00122"	"8/64"	"8"	"64"	"933892.685424805"	"HCD"	"MS2"	"0"	"80.2"	"100.000"	"55.7033"	"17673"	"17673"	"17660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.8"	""	"112.5"	""	"101.3"	""	"118.1"	""	"144.3"	"164.6"	""	"628"	"36"	"34.000"	"27.000"	"0.0071438059326243"	""	"0"	"7.813E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAEGGGAK"	"[K].iLAEGGGAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"637.39691"	"1273.78655"	"1273.78801"	"-1.15"	"-0.00073"	"8/64"	"8"	"64"	"1039358.23913574"	"HCD"	"MS2"	"0"	"82.2"	"100.000"	"51.4879"	"15923"	"15923"	"15901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.8"	""	"115.8"	""	"126.8"	""	"137.3"	"1.9"	"144.5"	"136.9"	""	"632"	"49"	"34.000"	"28.000"	"0.000415611046972747"	""	"0"	"1.75E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAEGGGAK"	"[K].iLAEGGGAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"637.39844"	"1273.78960"	"1273.78801"	"1.25"	"0.00080"	"7/64"	"7"	"64"	"425723.049194336"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"51.7770"	"16039"	"16039"	"16022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"46.8"	""	"61.2"	""	"70.2"	"0.8"	"72.9"	"86.9"	""	"614"	"31"	"34.000"	"27.000"	"0.0266157295857772"	"25"	"9.9E-05"	"0.0007473"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAEGGGAK"	"[K].iLAEGGGAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"637.39935"	"1273.79143"	"1273.78801"	"2.69"	"0.00171"	"8/64"	"8"	"64"	"1081769.34356689"	"HCD"	"MS2"	"17.0842"	"84.2"	"100.000"	"51.1758"	"15833"	"15833"	"15814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.7"	""	"121.1"	""	"124.0"	""	"137.4"	"1.3"	"148.6"	"145.8"	""	"617"	"45"	"34.000"	"27.000"	"0.000971080354900255"	""	"0"	"0.0001272"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"637.84985"	"1274.69243"	"1274.69422"	"-1.40"	"-0.00089"	"5/70"	"5"	"70"	"967602.4375"	"HCD"	"MS2"	"9.29275"	"57.5"	"100.000"	"61.2197"	"19910"	"19910"	"19888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.5"	""	"74.0"	""	"94.3"	""	"92.3"	"0.5"	"105.3"	"101.4"	""	"872"	"22"	"36.000"	"29.000"	"0.268217116501502"	"25"	"0.004275"	"0.05021"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"637.85034"	"1274.69341"	"1274.69422"	"-0.64"	"-0.00041"	"7/70"	"7"	"70"	"676390.149658203"	"HCD"	"MS2"	"19.84206"	"35.3"	"100.000"	"60.5911"	"19655"	"19655"	"19628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"40.9"	""	"53.2"	""	"53.9"	""	"63.5"	"77.6"	""	"869"	"44"	"36.000"	"29.000"	"0.00177006730705887"	""	"0.0001991"	"0.005571"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"637.85071"	"1274.69414"	"1274.69422"	"-0.06"	"-0.00004"	"7/70"	"7"	"70"	"2217754.42889404"	"HCD"	"MS2"	"0"	"78.5"	"100.000"	"61.0819"	"19822"	"19822"	"19802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.7"	""	"107.8"	""	"111.9"	""	"126.2"	""	"148.2"	"143.4"	""	"872"	"47"	"36.000"	"29.000"	"0.000856025080700516"	""	"0"	"0.0001412"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"637.85077"	"1274.69426"	"1274.69422"	"0.03"	"0.00002"	"6/70"	"6"	"70"	"2657427.50036621"	"HCD"	"MS2"	"0"	"89.8"	"100.000"	"60.8905"	"19776"	"19776"	"19760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.9"	""	"116.3"	""	"135.1"	""	"151.0"	""	"169.1"	"181.3"	""	"872"	"50"	"36.000"	"29.000"	"0.000399472133693192"	""	"0"	"0.0001548"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAYEHLK"	"[M].aATAYEHLk.[L]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"Q9ES21"	"Phosphatidylinositide phosphatase SAC1 OS=Rattus norvegicus OX=10116 GN=Sacm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"637.85107"	"1274.69487"	"1274.69422"	"0.51"	"0.00033"	"6/70"	"6"	"70"	"1215547.58398438"	"HCD"	"MS2"	"28.75532"	"51.6"	"100.000"	"60.7571"	"19690"	"19690"	"19663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.8"	""	"68.3"	""	"74.6"	""	"80.8"	"1.6"	"93.9"	"103.8"	""	"855"	"46"	"36.000"	"29.000"	"0.0010231424858633"	""	"0.0001686"	"0.001035"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"425.57983"	"1274.72495"	"1274.72658"	"-1.28"	"-0.00054"	"7/80"	"7"	"80"	"1325189.03240967"	"HCD"	"MS2"	"5.971322"	"34.9"	"100.000"	"54.8126"	"17311"	"17311"	"17290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"40.5"	""	"44.7"	""	"60.5"	""	"60.2"	"80.8"	""	"901"	"34"	"36.000"	"29.000"	"0.016660759499101"	"23"	"0"	"0.0003827"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"637.86658"	"1274.72588"	"1274.72658"	"-0.55"	"-0.00035"	"9/80"	"9"	"80"	"5386285.82336426"	"HCD"	"MS2"	"2.551447"	"232.2"	"100.000"	"54.9437"	"17365"	"17365"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.0"	"3.3"	"222.9"	""	"238.0"	""	"438.0"	""	"512.0"	"504.7"	""	"894"	"57"	"36.000"	"29.000"	"8.73589736731601E-05"	""	"0"	"3.918E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"637.86664"	"1274.72600"	"1274.72658"	"-0.46"	"-0.00029"	"9/80"	"9"	"80"	"4751973.09130859"	"HCD"	"MS2"	"3.891075"	"206.1"	"100.000"	"55.3160"	"17482"	"17482"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.8"	""	"194.4"	""	"216.4"	""	"404.2"	""	"431.7"	"461.5"	""	"893"	"56"	"36.000"	"29.000"	"0.000124400310179319"	"28"	"0"	"6.791E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"425.58029"	"1274.72632"	"1274.72658"	"-0.20"	"-0.00009"	"7/80"	"7"	"80"	"1238572.53509521"	"HCD"	"MS2"	"6.354456"	"30.2"	"100.000"	"54.8636"	"17298"	"17298"	"17273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"31.6"	""	"38.1"	""	"47.7"	""	"69.4"	"66.9"	""	"966"	"30"	"36.000"	"29.000"	"0.0431466548643181"	"21"	"9.9E-05"	"0.0005693"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"425.58032"	"1274.72641"	"1274.72658"	"-0.13"	"-0.00006"	"7/80"	"7"	"80"	"1303934.54650879"	"HCD"	"MS2"	"9.146089"	"34.5"	"100.000"	"55.1805"	"17427"	"17427"	"17405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.6"	""	"34.7"	""	"48.5"	""	"52.5"	""	"76.8"	"78.8"	""	"966"	"37"	"36.000"	"29.000"	"0.00970391828490015"	"25"	"0"	"0.0003252"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"425.58041"	"1274.72669"	"1274.72658"	"0.08"	"0.00004"	"7/80"	"7"	"80"	"1993546.11102295"	"HCD"	"MS2"	"54.34336"	"46.1"	"100.000"	"54.4980"	"17183"	"17183"	"17157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"54.1"	""	"47.4"	""	"73.7"	""	"96.6"	"114.6"	""	"966"	"37"	"36.000"	"29.000"	"0.0101612498640721"	"24"	"9.9E-05"	"0.0004449"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"637.86749"	"1274.72771"	"1274.72658"	"0.89"	"0.00056"	"9/80"	"9"	"80"	"5408763.47192383"	"HCD"	"MS2"	"21.4339"	"254.6"	"100.000"	"54.3693"	"17130"	"17130"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"310.5"	""	"247.7"	""	"281.0"	""	"508.1"	"2.6"	"530.7"	"537.9"	""	"927"	"50"	"36.000"	"29.000"	"0.000462433979581754"	"25"	"0"	"7.973E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"637.86749"	"1274.72771"	"1274.72658"	"0.89"	"0.00056"	"9/80"	"9"	"80"	"31873052.8325195"	"HCD"	"MS2"	"0.1904813"	"441.2"	"33.726"	"55.0131"	"17359"	"17359"	"17351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"538.4"	""	"418.7"	""	"442.0"	""	"879.4"	""	"955.1"	"965.1"	""	"927"	"57"	"36.000"	"29.000"	"9.01674397832105E-05"	"28"	"0"	"4.924E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"637.86853"	"1274.72978"	"1274.72658"	"2.51"	"0.00160"	"9/80"	"9"	"80"	"6059154.69616699"	"HCD"	"MS2"	"13.17594"	"269.9"	"100.000"	"54.7303"	"17243"	"17243"	"17231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.8"	""	"281.8"	""	"278.2"	""	"518.1"	""	"578.1"	"582.1"	""	"898"	"53"	"36.000"	"29.000"	"0.000201951154847086"	"24"	"0"	"3.03E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELANAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"637.86853"	"1274.72978"	"1274.72658"	"2.51"	"0.00160"	"9/80"	"9"	"80"	"31699916.7767334"	"HCD"	"MS2"	"0.7415865"	"552.7"	"40.484"	"54.6498"	"17245"	"17245"	"17236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"616.7"	""	"527.2"	""	"548.6"	""	"1120.5"	""	"1211.1"	"1232.7"	""	"898"	"57"	"36.000"	"29.000"	"8.69453461812027E-05"	"27"	"0"	"5.292E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"425.59500"	"1274.77045"	"1274.77202"	"-1.23"	"-0.00052"	"7/58"	"7"	"58"	"909595.807617188"	"HCD"	"MS2"	"22.83944"	"48.2"	"100.000"	"58.4985"	"18806"	"18806"	"18779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.3"	""	"64.9"	""	"64.2"	""	"76.6"	""	"92.4"	"95.7"	""	"738"	"24"	"35.000"	"28.000"	"0.145219977843182"	"26"	"0.002373"	"0.02247"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"425.59503"	"1274.77054"	"1274.77202"	"-1.16"	"-0.00049"	"7/58"	"7"	"58"	"948043.308105469"	"HCD"	"MS2"	"54.18739"	"56.1"	"100.000"	"58.1899"	"18680"	"18680"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"75.8"	""	"79.3"	""	"97.6"	""	"93.9"	"101.3"	""	"738"	"24"	"35.000"	"28.000"	"0.151365314002058"	"25"	"0.00212"	"0.0192"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"637.88892"	"1274.77056"	"1274.77202"	"-1.15"	"-0.00073"	"7/58"	"7"	"58"	"3924926.92883301"	"HCD"	"MS2"	"23.48199"	"269.8"	"100.000"	"58.4113"	"18735"	"18735"	"18718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"403.0"	""	"364.9"	""	"393.4"	""	"427.6"	"0.3"	"474.8"	"490.5"	""	"738"	"42"	"35.000"	"28.000"	"0.00224919115081622"	"24"	"0.0001991"	"0.002183"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLLAEK"	"[K].qDLLAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"637.88898"	"1274.77068"	"1274.77202"	"-1.06"	"-0.00067"	"6/68"	"6"	"68"	"1651645.44915771"	"HCD"	"MS2"	"35.54805"	"119.8"	"100.000"	"65.6280"	"21699"	"21699"	"21680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.0"	""	"134.8"	""	"138.5"	""	"200.8"	""	"247.1"	"260.5"	""	"710"	"31"	"35.000"	"28.000"	"0.0278117523182005"	""	"0.001872"	"0.01567"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAEIEK"	"[R].iNAEIEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"637.88910"	"1274.77092"	"1274.77202"	"-0.86"	"-0.00055"	"12/62"	"12"	"62"	"1001274.1385498"	"HCD"	"MS2"	"17.55103"	"87.6"	"100.000"	"59.7691"	"19321"	"19321"	"19303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.9"	""	"97.8"	""	"98.6"	""	"153.6"	""	"183.6"	"191.4"	""	"709"	"35"	"35.000"	"28.000"	"0.0125492057414078"	""	"0.0007633"	"0.007529"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"425.59518"	"1274.77100"	"1274.77202"	"-0.80"	"-0.00034"	"7/58"	"7"	"58"	"396857.093078613"	"HCD"	"MS2"	"18.93329"	"28.2"	"100.000"	"58.9199"	"18942"	"18942"	"18917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.4"	""	"33.5"	""	"35.2"	""	"42.6"	""	"55.2"	"63.7"	""	"709"	"26"	"35.000"	"28.000"	"0.0813984695755832"	"26"	"0.001615"	"0.01409"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"637.88916"	"1274.77104"	"1274.77202"	"-0.77"	"-0.00049"	"12/56"	"12"	"56"	"2761283.04821777"	"HCD"	"MS2"	"11.24686"	"222.9"	"100.000"	"54.0080"	"16949"	"16949"	"16931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"280.9"	""	"229.8"	""	"242.8"	""	"385.5"	""	"492.0"	"492.7"	""	"709"	"35"	"35.000"	"28.000"	"0.012263550943936"	""	"0.001951"	"0.01719"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"3"	"637.88916"	"1274.77104"	"1274.77202"	"-0.77"	"-0.00049"	"12/56"	"12"	"56"	"3204272.58123779"	"HCD"	"MS2"	"7.200385"	"247.8"	"100.000"	"53.6792"	"16849"	"16849"	"16832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"304.0"	""	"273.2"	""	"272.4"	""	"442.7"	""	"513.8"	"553.2"	""	"709"	"35"	"35.000"	"28.000"	"0.0121511180330717"	""	"0.002189"	"0.02128"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"637.88916"	"1274.77104"	"1274.77202"	"-0.77"	"-0.00049"	"7/58"	"7"	"58"	"6421250.16711426"	"HCD"	"MS2"	"1.77148"	"409.7"	"100.000"	"58.7082"	"18856"	"18856"	"18842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"599.0"	""	"543.8"	""	"623.4"	""	"583.4"	"2.4"	"760.4"	"768.5"	""	"709"	"43"	"35.000"	"28.000"	"0.00189067220450362"	"25"	"0.0001991"	"0.002713"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"3"	"637.88928"	"1274.77129"	"1274.77202"	"-0.58"	"-0.00037"	"12/56"	"12"	"56"	"4282075.64361572"	"HCD"	"MS2"	"4.427915"	"333.8"	"100.000"	"53.3982"	"16700"	"16700"	"16682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"426.3"	""	"351.7"	""	"339.2"	""	"644.3"	""	"713.4"	"699.4"	""	"709"	"37"	"35.000"	"28.000"	"0.00667753602224134"	""	"0.001453"	"0.01185"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"637.88928"	"1274.77129"	"1274.77202"	"-0.58"	"-0.00037"	"7/58"	"7"	"58"	"3874099.41229248"	"HCD"	"MS2"	"26.77861"	"271.7"	"100.000"	"58.1324"	"18656"	"18656"	"18638"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"397.4"	""	"383.6"	""	"369.1"	""	"419.1"	""	"494.4"	"511.4"	""	"709"	"44"	"35.000"	"28.000"	"0.00151571043140737"	"25"	"9.9E-05"	"0.0009714"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"3"	"637.88934"	"1274.77141"	"1274.77202"	"-0.48"	"-0.00031"	"12/56"	"12"	"56"	"4561215.59490967"	"HCD"	"MS2"	"4.183612"	"342.0"	"100.000"	"53.0923"	"16610"	"16610"	"16593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"443.7"	""	"354.2"	""	"349.9"	""	"663.1"	""	"696.3"	"742.3"	""	"703"	"34"	"35.000"	"28.000"	"0.0135184011388942"	""	"0.002328"	"0.02213"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"637.88934"	"1274.77141"	"1274.77202"	"-0.48"	"-0.00031"	"7/58"	"7"	"58"	"6499588.34417725"	"HCD"	"MS2"	"2.429448"	"422.1"	"100.000"	"58.4342"	"18780"	"18780"	"18763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"616.3"	""	"595.8"	""	"654.2"	""	"581.0"	"8.3"	"760.3"	"781.6"	""	"703"	"43"	"35.000"	"28.000"	"0.00183199940953436"	"25"	"0.0001991"	"0.002446"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLLAEK"	"[K].qDLLAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.2286"	"0.0000"	"1"	"1"	"1"	"637.88940"	"1274.77153"	"1274.77202"	"-0.39"	"-0.00025"	"12/68"	"12"	"68"	"1905139.99060059"	"HCD"	"MS2"	"27.17834"	"145.3"	"100.000"	"65.7400"	"21711"	"21711"	"21691"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.5"	""	"166.2"	""	"159.2"	""	"252.7"	""	"321.3"	"323.0"	""	"703"	"35"	"35.000"	"28.000"	"0.0115325495529261"	""	"0.001488"	"0.0127"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEIAAGK"	"[K].vEEIAAGk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"P62718"	"60S ribosomal protein L18a OS=Rattus norvegicus OX=10116 GN=Rpl18a PE=2 SV=1"	"0"	"3"	"3"	"0.4348"	"0.0000"	"1"	"1"	"1"	"425.59543"	"1274.77173"	"1274.77202"	"-0.23"	"-0.00010"	"7/58"	"7"	"58"	"1316679.2489624"	"HCD"	"MS2"	"23.27286"	"72.5"	"100.000"	"58.5791"	"18803"	"18803"	"18782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.2"	""	"94.8"	""	"96.9"	""	"117.3"	""	"132.3"	"141.3"	""	"703"	"23"	"35.000"	"28.000"	"0.178618044060037"	"26"	"0.0005161"	"0.006601"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAEIEK"	"[R].iNAEIEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.2812"	"0.0000"	"1"	"1"	"1"	"637.88959"	"1274.77190"	"1274.77202"	"-0.10"	"-0.00006"	"6/62"	"6"	"62"	"943017.737243652"	"HCD"	"MS2"	"25.70378"	"78.1"	"100.000"	"60.2230"	"19472"	"19472"	"19451"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.8"	""	"86.7"	""	"86.4"	""	"139.4"	"1.7"	"174.6"	"162.7"	""	"703"	"32"	"35.000"	"28.000"	"0.0199033110096946"	""	"0.0001991"	"0.005356"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QLDAEIK"	"[R].qLDAEIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RYI0"	"WD repeat-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Wdr91 PE=2 SV=1"	"B2RYI0"	"WD repeat-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Wdr91 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"637.88959"	"1274.77190"	"1274.77202"	"-0.10"	"-0.00006"	"5/64"	"5"	"64"	"1414572.21429443"	"HCD"	"MS2"	"24.80889"	"112.1"	"100.000"	"64.9846"	"21403"	"21403"	"21379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.7"	""	"130.3"	""	"141.3"	""	"193.2"	""	"210.6"	"231.5"	""	"703"	"19"	"35.000"	"28.000"	"0.411079035943485"	""	"0.004819"	"0.05695"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"3"	"637.88959"	"1274.77190"	"1274.77202"	"-0.10"	"-0.00006"	"12/56"	"12"	"56"	"22238739.2216797"	"HCD"	"MS2"	"0"	"674.4"	"45.670"	"53.3846"	"16729"	"16729"	"16712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"807.3"	""	"673.1"	""	"732.8"	""	"1197.9"	""	"1468.6"	"1539.6"	""	"703"	"36"	"35.000"	"28.000"	"0.0092241281799963"	""	"0.002799"	"0.02944"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAEIEK"	"[R].iNAEIEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"637.88965"	"1274.77202"	"1274.77202"	"0.00"	"0.00000"	"12/62"	"12"	"62"	"921609.713745117"	"HCD"	"MS2"	"17.06604"	"74.0"	"100.000"	"60.0917"	"19452"	"19452"	"19429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.6"	""	"82.0"	""	"77.8"	""	"138.6"	"0.0"	"156.7"	"157.0"	""	"703"	"36"	"35.000"	"28.000"	"0.00916062972824611"	""	"0.000885"	"0.007739"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INAEIEK"	"[R].iNAEIEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"637.88965"	"1274.77202"	"1274.77202"	"0.00"	"0.00000"	"12/62"	"12"	"62"	"997655.896362305"	"HCD"	"MS2"	"9.831799"	"85.3"	"100.000"	"59.9120"	"19346"	"19346"	"19321"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.8"	""	"92.7"	""	"100.4"	""	"159.1"	"1.1"	"178.6"	"178.5"	""	"703"	"38"	"35.000"	"28.000"	"0.00506903546060992"	""	"0.0001991"	"0.005603"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEALNK"	"[R].eLEALNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.1500"	"0.0000"	"1"	"1"	"1"	"637.88965"	"1274.77202"	"1274.77202"	"0.00"	"0.00000"	"6/54"	"6"	"54"	"1290831.82086182"	"HCD"	"MS2"	"20.04266"	"101.5"	"100.000"	"63.5858"	"20869"	"20869"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.6"	""	"134.2"	""	"117.4"	""	"182.7"	"1.3"	"185.7"	"196.1"	""	"703"	"20"	"35.000"	"28.000"	"0.332602362220076"	""	"0.00307"	"0.03315"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLENEK"	"[R].aLLENEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"3"	"637.88965"	"1274.77202"	"1274.77202"	"0.00"	"0.00000"	"12/56"	"12"	"56"	"17563361.2801514"	"HCD"	"MS2"	"0"	"1103.7"	"92.991"	"53.7044"	"16826"	"16826"	"16809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1340.9"	""	"1064.4"	""	"1180.7"	""	"1962.5"	""	"2463.3"	"2494.8"	""	"703"	"37"	"35.000"	"28.000"	"0.00641099339365352"	""	"0.00307"	"0.03411"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QDLLAEK"	"[K].qDLLAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.0500"	"0.0000"	"1"	"1"	"1"	"637.88971"	"1274.77214"	"1274.77202"	"0.09"	"0.00006"	"4/68"	"4"	"68"	"1394624.73248291"	"HCD"	"MS2"	"20.56525"	"112.4"	"100.000"	"64.9857"	"21437"	"21437"	"21418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.2"	""	"139.3"	""	"131.3"	""	"182.8"	"0.5"	"228.5"	"231.4"	""	"702"	"20"	"35.000"	"28.000"	"0.341434275545715"	""	"0.009239"	"0.1192"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLLAEK"	"[K].qDLLAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.2424"	"0.0000"	"1"	"1"	"1"	"637.88977"	"1274.77226"	"1274.77202"	"0.19"	"0.00012"	"12/68"	"12"	"68"	"1398828.2310791"	"HCD"	"MS2"	"16.52422"	"110.8"	"100.000"	"65.9182"	"21817"	"21817"	"21798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.7"	""	"100.3"	""	"126.6"	""	"203.1"	""	"261.9"	"249.3"	""	"688"	"33"	"35.000"	"28.000"	"0.0164648751758987"	""	"0.001348"	"0.01122"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNWSELR"	"[R].eLNWSELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"638.34760"	"1275.68791"	"1275.68947"	"-1.22"	"-0.00078"	"6/76"	"6"	"76"	"344509.755126953"	"HCD"	"MS2"	"25.66383"	"22.3"	"100.000"	"92.0728"	"32394"	"32394"	"32371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.0"	""	"23.0"	""	"26.7"	""	"38.5"	""	"42.8"	"52.0"	""	"884"	"22"	"36.000"	"29.000"	"0.258477217191861"	"21"	"0.000885"	"0.007754"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDIGGLWR"	"[R].tEDIGGLWR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"638.34760"	"1275.68791"	"1275.68947"	"-1.22"	"-0.00078"	"6/68"	"6"	"68"	"356012.624450684"	"HCD"	"MS2"	"20.1314"	"24.5"	"100.000"	"89.6990"	"31438"	"31438"	"31423"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.1"	""	"94.3"	""	"24.7"	""	"27.1"	""	"31.0"	"30.5"	""	"884"	"31"	"36.000"	"29.000"	"0.0346275902102666"	"23"	"9.9E-05"	"0.000895"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWIEGVTGR"	"[R].eWIEGVTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"638.34802"	"1275.68877"	"1275.68947"	"-0.55"	"-0.00035"	"7/76"	"7"	"76"	"2244397.70428467"	"HCD"	"MS2"	"2.956354"	"109.7"	"100.000"	"80.8637"	"27845"	"27845"	"27830"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.9"	""	"158.0"	""	"191.3"	""	"156.2"	"1.1"	"183.5"	"150.7"	""	"868"	"38"	"36.000"	"29.000"	"0.00769998234706333"	"27"	"0"	"0.0003624"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNWSELR"	"[R].eLNWSELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"638.34808"	"1275.68889"	"1275.68947"	"-0.45"	"-0.00029"	"7/76"	"7"	"76"	"373160.484130859"	"HCD"	"MS2"	"38.69581"	"23.9"	"100.000"	"92.1451"	"32388"	"32388"	"32364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"35.0"	""	"30.8"	""	"39.3"	""	"43.7"	"45.0"	""	"865"	"37"	"36.000"	"29.000"	"0.00911981674846149"	"25"	"0.0001991"	"0.005186"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWIEGVTGR"	"[R].eWIEGVTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"638.34814"	"1275.68901"	"1275.68947"	"-0.36"	"-0.00023"	"8/76"	"8"	"76"	"4861760.7434082"	"HCD"	"MS2"	"0.9551624"	"216.4"	"100.000"	"81.1638"	"27967"	"27967"	"27952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"372.5"	""	"313.8"	""	"367.5"	""	"284.8"	""	"382.1"	"324.8"	""	"865"	"35"	"36.000"	"29.000"	"0.0134272202186552"	"25"	"9.9E-05"	"0.0005702"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWIEGVTGR"	"[R].eWIEGVTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"638.34821"	"1275.68913"	"1275.68947"	"-0.26"	"-0.00017"	"6/76"	"6"	"76"	"2365967.71411133"	"HCD"	"MS2"	"0"	"112.2"	"100.000"	"80.9396"	"27903"	"27903"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.9"	""	"168.3"	""	"186.7"	""	"154.3"	"0.2"	"192.1"	"167.7"	""	"885"	"32"	"36.000"	"29.000"	"0.0306840919162332"	"24"	"9.9E-05"	"0.0006442"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWIEGVTGR"	"[R].eWIEGVTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"638.34821"	"1275.68913"	"1275.68947"	"-0.26"	"-0.00017"	"7/76"	"7"	"76"	"4875327.45080566"	"HCD"	"MS2"	"0"	"220.4"	"100.000"	"81.2373"	"28024"	"28024"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.5"	""	"346.2"	""	"375.5"	""	"281.6"	"2.5"	"358.9"	"316.6"	""	"885"	"47"	"36.000"	"29.000"	"0.000801517990984174"	"25"	"0"	"0.0003377"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNWSELR"	"[R].eLNWSELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"638.34827"	"1275.68926"	"1275.68947"	"-0.16"	"-0.00011"	"6/76"	"6"	"76"	"1081493.590271"	"HCD"	"MS2"	"6.789658"	"55.8"	"100.000"	"92.4378"	"32506"	"32506"	"32488"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.5"	""	"63.8"	""	"72.6"	""	"101.3"	""	"104.7"	"105.5"	""	"885"	"41"	"36.000"	"29.000"	"0.00390762855935214"	"25"	"9.9E-05"	"0.0009525"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNWSELR"	"[R].eLNWSELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"638.34827"	"1275.68926"	"1275.68947"	"-0.16"	"-0.00011"	"6/76"	"6"	"76"	"1114410.99414063"	"HCD"	"MS2"	"3.727511"	"58.5"	"100.000"	"92.3745"	"32516"	"32516"	"32497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.5"	""	"64.1"	""	"69.3"	""	"102.1"	""	"123.7"	"114.7"	""	"885"	"48"	"36.000"	"29.000"	"0.000727634487522606"	"26"	"0.0001991"	"0.003596"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDIGGLWR"	"[R].tEDIGGLWR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"638.34851"	"1275.68974"	"1275.68947"	"0.22"	"0.00014"	"7/68"	"7"	"68"	"1435866.46179199"	"HCD"	"MS2"	"0"	"72.3"	"100.000"	"90.0436"	"31537"	"31537"	"31523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.4"	""	"342.4"	""	"55.4"	""	"68.2"	""	"81.5"	"74.9"	""	"879"	"48"	"36.000"	"29.000"	"0.000690174452504596"	""	"0"	"0.0002324"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWIEGVTGR"	"[R].eWIEGVTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"638.34851"	"1275.68974"	"1275.68947"	"0.22"	"0.00014"	"7/76"	"7"	"76"	"1240622.02630615"	"HCD"	"MS2"	"17.56758"	"75.2"	"100.000"	"81.4541"	"28084"	"28084"	"28065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.8"	""	"92.8"	""	"121.9"	""	"118.9"	""	"135.8"	"134.3"	""	"879"	"44"	"36.000"	"29.000"	"0.00190089828739886"	"25"	"9.9E-05"	"0.0009641"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDIGGLWR"	"[R].tEDIGGLWR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"638.34900"	"1275.69072"	"1275.68947"	"0.98"	"0.00063"	"10/68"	"10"	"68"	"1495558.37115479"	"HCD"	"MS2"	"0"	"78.8"	"100.000"	"89.9962"	"31557"	"31557"	"31544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"372.1"	""	"64.8"	""	"77.7"	""	"82.6"	"80.6"	""	"889"	"35"	"36.000"	"29.000"	"0.0144834413595393"	""	"9.9E-05"	"0.0004167"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDIGGLWR"	"[R].tEDIGGLWR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"Q6IRI9"	"Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Rattus norvegicus OX=10116 GN=Fmo2 PE=2 SV=3"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"638.34924"	"1275.69121"	"1275.68947"	"1.37"	"0.00087"	"6/68"	"6"	"68"	"221684.811523438"	"HCD"	"MS2"	"33.29776"	"17.7"	"100.000"	"89.7460"	"31417"	"31417"	"31397"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"52.8"	""	"18.0"	""	"19.7"	""	"26.7"	"32.7"	""	"889"	"19"	"36.000"	"29.000"	"0.626428870898523"	"24"	"0.005712"	"0.07109"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EWIEGVTGR"	"[R].eWIEGVTGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"638.34924"	"1275.69121"	"1275.68947"	"1.37"	"0.00087"	"5/76"	"5"	"76"	"1106225.87786865"	"HCD"	"MS2"	"17.04848"	"68.9"	"100.000"	"81.5348"	"28144"	"28144"	"28125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.2"	""	"94.5"	""	"100.2"	""	"100.4"	""	"130.5"	"130.9"	""	"889"	"29"	"36.000"	"29.000"	"0.0515076534810954"	"23"	"9.9E-05"	"0.0005151"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEEMLQR"	"[K].lQEEMLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"638.34979"	"1275.69231"	"1275.69284"	"-0.41"	"-0.00026"	"5/70"	"5"	"70"	"3678821.38800049"	"HCD"	"MS2"	"38.61979"	"219.2"	"100.000"	"58.6251"	"18857"	"18857"	"18839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.7"	""	"314.4"	""	"327.9"	""	"254.5"	""	"444.5"	"456.5"	""	"900"	"28"	"36.000"	"29.000"	"0.0723123563855794"	""	"0.001049"	"0.00888"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEEMLQR"	"[K].lQEEMLQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"638.35004"	"1275.69280"	"1275.69284"	"-0.03"	"-0.00002"	"6/70"	"6"	"70"	"3526572.23724365"	"HCD"	"MS2"	"36.05565"	"199.6"	"100.000"	"58.9038"	"18935"	"18935"	"18917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.2"	""	"298.3"	""	"279.6"	""	"240.9"	""	"403.0"	"413.2"	""	"928"	"33"	"36.000"	"29.000"	"0.0250332928847019"	""	"0.0001991"	"0.005952"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"638.35919"	"1275.71111"	"1275.71060"	"0.40"	"0.00026"	"7/80"	"7"	"80"	"1643805.07885742"	"HCD"	"MS2"	"21.43972"	"113.9"	"100.000"	"57.8726"	"18550"	"18550"	"18530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.0"	""	"134.8"	""	"127.7"	""	"201.9"	""	"255.0"	"237.8"	""	"927"	"40"	"36.000"	"29.000"	"0.00498941626517429"	"24"	"0"	"8.066E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALTSELANAR"	"[K].aLTSELAnAR.[D]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"638.35950"	"1275.71172"	"1275.71060"	"0.88"	"0.00056"	"9/80"	"9"	"80"	"1771157.37524414"	"HCD"	"MS2"	"28.46733"	"115.7"	"100.000"	"58.1627"	"18633"	"18633"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.7"	""	"133.8"	""	"131.1"	""	"208.2"	""	"248.5"	"252.2"	""	"939"	"40"	"36.000"	"29.000"	"0.00482653651970379"	"24"	"0"	"0.0002692"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTASQVLQR"	"[K].gSTASQVLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"638.36456"	"1275.72185"	"1275.72183"	"0.02"	"0.00001"	"9/86"	"9"	"86"	"4541131.81420898"	"HCD"	"MS2"	"2.28276"	"269.6"	"100.000"	"33.7427"	"8727"	"8727"	"8712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"333.2"	""	"271.2"	""	"296.8"	""	"462.3"	"2.6"	"604.1"	"593.2"	""	"1001"	"39"	"36.000"	"30.000"	"0.00627197158058178"	"28"	"0"	"8.077E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSTASQVLQR"	"[K].gSTASQVLQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"638.36456"	"1275.72185"	"1275.72183"	"0.02"	"0.00001"	"8/86"	"8"	"86"	"4582483.35046387"	"HCD"	"MS2"	"3.401296"	"269.1"	"100.000"	"33.5928"	"8704"	"8704"	"8681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"336.2"	""	"304.7"	""	"301.2"	""	"486.2"	""	"575.3"	"553.6"	""	"1001"	"39"	"36.000"	"30.000"	"0.00662832938364929"	"22"	"0"	"0.0001759"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDVAYQR"	"[R].vPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"638.36566"	"1275.72405"	"1275.72585"	"-1.42"	"-0.00090"	"11/66"	"11"	"66"	"4051847.22564697"	"HCD"	"MS2"	"0"	"110.4"	"100.000"	"62.7470"	"20528"	"20528"	"20510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.5"	""	"167.8"	""	"190.8"	""	"116.0"	""	"181.3"	"210.5"	""	"971"	"35"	"36.000"	"29.000"	"0.0138098586766596"	"18"	"0"	"0.0003177"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDVAYQR"	"[R].vPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"638.36646"	"1275.72563"	"1275.72585"	"-0.17"	"-0.00011"	"8/66"	"8"	"66"	"1162211.72741699"	"HCD"	"MS2"	"4.028695"	"50.3"	"100.000"	"63.0467"	"20649"	"20649"	"20636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.7"	""	"66.3"	""	"77.0"	"1.8"	"64.5"	"0.2"	"89.5"	"96.9"	""	"909"	"29"	"36.000"	"29.000"	"0.0630280524222273"	"17"	"0"	"0.0003086"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDVAYQR"	"[R].vPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"638.36652"	"1275.72576"	"1275.72585"	"-0.08"	"-0.00005"	"8/66"	"8"	"66"	"3789909.03295898"	"HCD"	"MS2"	"0"	"104.4"	"100.000"	"62.8432"	"20534"	"20534"	"20515"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.2"	""	"167.7"	""	"184.1"	""	"113.3"	""	"163.5"	"198.9"	""	"907"	"36"	"36.000"	"29.000"	"0.0122342483261377"	"18"	"9.9E-05"	"0.0005104"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDVAYQR"	"[R].vPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"638.36664"	"1275.72600"	"1275.72585"	"0.12"	"0.00007"	"8/66"	"8"	"66"	"804586.126525879"	"HCD"	"MS2"	"2.675709"	"42.0"	"100.000"	"63.1475"	"20658"	"20658"	"20641"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"58.6"	""	"61.3"	""	"57.3"	""	"77.7"	"81.8"	""	"907"	"24"	"36.000"	"29.000"	"0.181793056443982"	"16"	"0.0001991"	"0.005342"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.36761"	"1275.72795"	"1275.72922"	"-1.00"	"-0.00064"	"8/76"	"8"	"76"	"3627829.95080566"	"HCD"	"MS2"	"0"	"135.2"	"100.000"	"75.8049"	"25826"	"25826"	"25809"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.5"	""	"109.5"	""	"114.7"	""	"454.3"	""	"240.7"	"269.1"	""	"912"	"24"	"36.000"	"29.000"	"0.186622860836885"	"14"	"0.001453"	"0.01188"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLGMQVLR"	"[R].dVLGmQVLR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"638.36786"	"1275.72844"	"1275.72922"	"-0.61"	"-0.00039"	"7/70"	"7"	"70"	"535874.0390625"	"HCD"	"MS2"	"14.90598"	"36.6"	"100.000"	"70.1932"	"23517"	"23517"	"23496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.6"	""	"34.6"	""	"40.5"	""	"76.7"	"2.0"	"83.3"	"68.2"	""	"911"	"21"	"36.000"	"29.000"	"0.398555109616097"	"16"	"0.003043"	"0.03268"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLGMQVLR"	"[R].dVLGmQVLR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"638.36792"	"1275.72856"	"1275.72922"	"-0.52"	"-0.00033"	"7/70"	"7"	"70"	"603993.770385742"	"HCD"	"MS2"	"18.8838"	"31.3"	"100.000"	"69.8612"	"23382"	"23382"	"23358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.8"	""	"27.0"	""	"39.4"	""	"69.2"	""	"61.6"	"61.2"	""	"911"	"25"	"36.000"	"29.000"	"0.139793951571217"	"16"	"0.0007633"	"0.007432"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.36798"	"1275.72869"	"1275.72922"	"-0.42"	"-0.00027"	"7/76"	"7"	"76"	"3116245.28814697"	"HCD"	"MS2"	"13.16304"	"111.2"	"100.000"	"73.5282"	"24899"	"24899"	"24881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.0"	""	"87.8"	""	"93.2"	""	"362.5"	""	"225.1"	"201.9"	""	"911"	"36"	"36.000"	"29.000"	"0.0119258236024375"	"15"	"0.0001686"	"0.001449"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.36798"	"1275.72869"	"1275.72922"	"-0.42"	"-0.00027"	"7/76"	"7"	"76"	"3229624.0657959"	"HCD"	"MS2"	"12.09534"	"114.8"	"100.000"	"73.4212"	"24827"	"24827"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.5"	""	"84.6"	""	"105.9"	""	"358.3"	"0.6"	"231.1"	"224.5"	""	"911"	"29"	"36.000"	"29.000"	"0.0529039843604276"	"14"	"0.0001686"	"0.001135"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.36798"	"1275.72869"	"1275.72922"	"-0.42"	"-0.00027"	"8/76"	"8"	"76"	"3902046.38513184"	"HCD"	"MS2"	"0.8789194"	"142.1"	"100.000"	"75.6654"	"25737"	"25737"	"25721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.9"	""	"101.5"	""	"124.3"	""	"491.1"	""	"262.5"	"269.5"	""	"911"	"28"	"36.000"	"29.000"	"0.0716949194764363"	"14"	"0.001049"	"0.008539"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"638.36816"	"1275.72905"	"1275.72922"	"-0.13"	"-0.00009"	"12/76"	"12"	"76"	"1576926.5211792"	"HCD"	"MS2"	"19.02271"	"82.7"	"100.000"	"75.3730"	"25618"	"25618"	"25601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.8"	""	"79.0"	""	"65.7"	""	"240.1"	""	"155.8"	"154.6"	""	"930"	"22"	"36.000"	"29.000"	"0.278902850458812"	"20"	"0.00307"	"0.03307"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"638.36829"	"1275.72930"	"1275.72922"	"0.06"	"0.00004"	"8/76"	"8"	"76"	"2756765.54193115"	"HCD"	"MS2"	"47.25471"	"137.2"	"100.000"	"73.2310"	"24778"	"24778"	"24759"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.9"	""	"127.0"	""	"161.4"	""	"350.5"	""	"247.4"	"279.4"	""	"930"	"19"	"36.000"	"29.000"	"0.565526490300561"	"18"	"0.006267"	"0.077"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVNMLDAVR"	"[K].lVNmLDAVR.[E]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"638.36835"	"1275.72942"	"1275.72922"	"0.15"	"0.00010"	"9/76"	"9"	"76"	"1540868.68780518"	"HCD"	"MS2"	"16.67815"	"71.3"	"100.000"	"75.4986"	"25700"	"25700"	"25681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.7"	""	"84.8"	""	"59.4"	""	"210.8"	""	"128.7"	"131.0"	""	"930"	"25"	"36.000"	"29.000"	"0.164988225993613"	"17"	"0.002875"	"0.03103"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLGMQVLR"	"[R].dVLGmQVLR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"638.36871"	"1275.73015"	"1275.72922"	"0.73"	"0.00046"	"6/70"	"6"	"70"	"456231.294189453"	"HCD"	"MS2"	"8.059787"	"25.2"	"100.000"	"69.8651"	"23418"	"23418"	"23388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.6"	""	"26.6"	""	"33.4"	""	"50.9"	""	"47.8"	"46.4"	""	"919"	"27"	"36.000"	"29.000"	"0.0853661147114636"	"23"	"0.0001991"	"0.005702"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLGMQVLR"	"[R].dVLGmQVLR.[H]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"638.36877"	"1275.73027"	"1275.72922"	"0.82"	"0.00052"	"8/70"	"8"	"70"	"811880.368103027"	"HCD"	"MS2"	"14.49799"	"42.8"	"100.000"	"70.2042"	"23555"	"23555"	"23533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"42.5"	""	"52.4"	""	"90.5"	""	"92.7"	"89.6"	""	"921"	"25"	"36.000"	"29.000"	"0.132199445802237"	"16"	"0.006423"	"0.07984"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.2400"	"0.0000"	"1"	"1"	"1"	"638.37872"	"1275.75017"	"1275.75604"	"-4.60"	"-0.00293"	"10/52"	"10"	"52"	"2874966.38824463"	"HCD"	"MS2"	"53.55075"	"243.5"	"100.000"	"63.6698"	"20871"	"20871"	"20850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"417.3"	""	"338.0"	""	"265.4"	""	"438.9"	""	"435.0"	"412.3"	""	"784"	"25"	"35.000"	"28.000"	"0.122824800393171"	""	"0.004819"	"0.05806"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.4194"	"0.0000"	"1"	"1"	"1"	"638.37878"	"1275.75029"	"1275.75604"	"-4.50"	"-0.00287"	"6/52"	"6"	"52"	"5355546.23400879"	"HCD"	"MS2"	"20.80247"	"433.9"	"100.000"	"63.7258"	"20926"	"20926"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"760.6"	""	"616.6"	""	"443.7"	""	"789.7"	""	"797.5"	"708.2"	""	"784"	"31"	"35.000"	"28.000"	"0.0326803024370896"	""	"0.004959"	"0.06182"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"638.38068"	"1275.75408"	"1275.75604"	"-1.54"	"-0.00098"	"12/52"	"12"	"52"	"5525763.18585205"	"HCD"	"MS2"	"2.41604"	"418.8"	"100.000"	"63.9539"	"20986"	"20986"	"20970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"775.3"	""	"624.7"	""	"423.8"	""	"748.9"	"0.4"	"724.3"	"664.1"	""	"801"	"36"	"36.000"	"29.000"	"0.00965167124188981"	""	"0.00307"	"0.03373"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEELK"	"[K].gLEEELk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"638.38104"	"1275.75481"	"1275.75604"	"-0.96"	"-0.00062"	"12/52"	"12"	"52"	"3133825.59100342"	"HCD"	"MS2"	"2.676367"	"251.2"	"100.000"	"64.0261"	"21048"	"21048"	"21033"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"461.5"	""	"380.8"	""	"260.8"	""	"438.5"	""	"433.0"	"403.6"	""	"761"	"36"	"35.000"	"28.000"	"0.00931868563521925"	""	"0.002189"	"0.02131"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQQLLFIR"	"[R].eQQLLFIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"638.38361"	"1275.75994"	"1275.76224"	"-1.80"	"-0.00115"	"6/68"	"6"	"68"	"348007.745483398"	"HCD"	"MS2"	"51.19215"	"23.7"	"100.000"	"94.3316"	"33304"	"33304"	"33278"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"28.0"	""	"39.3"	""	"35.8"	""	"45.5"	"44.8"	""	"736"	"22"	"35.000"	"28.000"	"0.216694465170857"	"22"	"0.001488"	"0.01243"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQQLLFIR"	"[R].eQQLLFIR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"638.38434"	"1275.76140"	"1275.76224"	"-0.66"	"-0.00042"	"6/68"	"6"	"68"	"417729.251037598"	"HCD"	"MS2"	"44.91888"	"24.6"	"100.000"	"94.4428"	"33314"	"33314"	"33287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.3"	""	"34.5"	""	"43.9"	""	"36.1"	""	"38.4"	"47.3"	""	"690"	"20"	"35.000"	"28.000"	"0.368823933331817"	"23"	"0.0007633"	"0.007348"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASVAENK"	"[K].vASVAENk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"638.38599"	"1275.76470"	"1275.76727"	"-2.02"	"-0.00129"	"7/64"	"7"	"64"	"1222434.7947998"	"HCD"	"MS2"	"8.481971"	"107.9"	"100.000"	"41.7886"	"11984"	"11984"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.0"	""	"127.3"	""	"142.0"	""	"165.6"	""	"216.8"	"221.4"	""	"682"	"43"	"35.000"	"28.000"	"0.00154082877031848"	"22"	"0"	"0.0003351"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSQSALPK"	"[R].sSQSALPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"638.38672"	"1275.76616"	"1275.76727"	"-0.87"	"-0.00056"	"5/72"	"5"	"72"	"695498.33416748"	"HCD"	"MS2"	"20.43478"	"60.5"	"100.000"	"35.9478"	"9657"	"9657"	"9633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.7"	""	"78.4"	""	"69.6"	""	"86.4"	""	"125.4"	"132.3"	""	"669"	"20"	"35.000"	"28.000"	"0.309311539182335"	"22"	"0.002035"	"0.01782"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASVAENK"	"[K].vASVAENk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"638.38702"	"1275.76677"	"1275.76727"	"-0.39"	"-0.00025"	"12/64"	"12"	"64"	"1066310.33294678"	"HCD"	"MS2"	"0"	"92.4"	"100.000"	"41.7006"	"11982"	"11982"	"11955"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.8"	""	"115.0"	""	"112.8"	""	"147.3"	""	"182.9"	"195.0"	""	"666"	"40"	"35.000"	"28.000"	"0.00345496962467398"	"24"	"0.0001686"	"0.001027"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSQSALPK"	"[R].sSQSALPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"638.38702"	"1275.76677"	"1275.76727"	"-0.39"	"-0.00025"	"11/72"	"11"	"72"	"776114.942871094"	"HCD"	"MS2"	"18.95255"	"67.2"	"100.000"	"36.0369"	"9656"	"9656"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"78.7"	""	"75.5"	""	"124.2"	""	"126.2"	"142.4"	""	"666"	"23"	"35.000"	"28.000"	"0.157922581091661"	"28"	"0.0001686"	"0.001853"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSEIK"	"[R].lLDSEIk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"638.39923"	"1275.79119"	"1275.79242"	"-0.97"	"-0.00062"	"6/52"	"6"	"52"	"800974.556152344"	"HCD"	"MS2"	"30.00391"	"65.1"	"100.000"	"82.7092"	"28589"	"28589"	"28571"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.5"	""	"70.6"	""	"92.3"	""	"111.6"	""	"128.6"	"117.5"	""	"593"	"32"	"34.000"	"27.000"	"0.0182820418051929"	""	"0.0001991"	"0.003327"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSEIK"	"[R].lLDSEIk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"638.39954"	"1275.79180"	"1275.79242"	"-0.49"	"-0.00031"	"5/52"	"5"	"52"	"855845.853271484"	"HCD"	"MS2"	"32.57714"	"71.3"	"100.000"	"82.7620"	"28639"	"28639"	"28614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.6"	""	"98.1"	""	"94.2"	""	"120.1"	""	"127.0"	"129.0"	""	"593"	"32"	"34.000"	"27.000"	"0.0168664893995199"	""	"0.0001991"	"0.003341"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSEIK"	"[R].lLDSEIk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"638.39960"	"1275.79192"	"1275.79242"	"-0.40"	"-0.00025"	"6/52"	"6"	"52"	"1966613.8972168"	"HCD"	"MS2"	"2.585105"	"155.5"	"100.000"	"83.0036"	"28708"	"28708"	"28690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.2"	""	"210.8"	""	"216.0"	""	"271.8"	""	"269.1"	"282.2"	""	"593"	"33"	"34.000"	"27.000"	"0.0157407237714488"	""	"0.001261"	"0.01019"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSEIK"	"[R].lLDSEIk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"638.40021"	"1275.79314"	"1275.79242"	"0.56"	"0.00036"	"6/52"	"6"	"52"	"2040496.33294678"	"HCD"	"MS2"	"0"	"93.1"	"100.000"	"83.0767"	"28766"	"28766"	"28748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.3"	""	"122.4"	""	"137.0"	""	"148.1"	"1.0"	"173.3"	"172.6"	""	"508"	"33"	"34.000"	"27.000"	"0.0134225093950896"	"27"	"0.001488"	"0.01217"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMAALDAADR"	"[R].nMAALDAADR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P70500"	"CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus OX=10116 GN=Cdipt PE=1 SV=1"	"P70500"	"CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus OX=10116 GN=Cdipt PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"638.83020"	"1276.65312"	"1276.65170"	"1.11"	"0.00071"	"8/96"	"8"	"96"	"1683405.51837158"	"HCD"	"MS2"	"37.16357"	"120.0"	"100.000"	"47.5862"	"14337"	"14337"	"14318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.3"	""	"149.2"	""	"166.5"	""	"185.1"	""	"250.5"	"244.0"	""	"656"	"40"	"35.000"	"28.000"	"0.00368022053011044"	"17"	"0"	"4.549E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLLESDR"	"[R].iDSLLESDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"638.85010"	"1276.69292"	"1276.69461"	"-1.33"	"-0.00085"	"7/76"	"7"	"76"	"800909.370727539"	"HCD"	"MS2"	"3.641046"	"46.4"	"100.000"	"91.6400"	"32182"	"32182"	"32164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.2"	""	"63.3"	""	"58.0"	""	"66.9"	""	"96.2"	"82.9"	""	"863"	"46"	"36.000"	"29.000"	"0.00112455525682452"	""	"0"	"0.0001362"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTDWK"	"[R].gPDTDWk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS3"	"F-box only protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxo7 PE=2 SV=1"	"Q68FS3"	"F-box only protein 7 OS=Rattus norvegicus OX=10116 GN=Fbxo7 PE=2 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"638.85052"	"1276.69377"	"1276.69377"	"0.00"	"0.00000"	"10/52"	"10"	"52"	"1386254.78607178"	"HCD"	"MS2"	"13.22387"	"134.8"	"100.000"	"54.2842"	"17062"	"17062"	"17037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.9"	""	"173.0"	""	"187.5"	""	"234.4"	""	"262.7"	"238.0"	""	"849"	"13"	"36.000"	"29.000"	"2.25879956058754"	"21"	"0.005832"	"0.07199"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSLLESDR"	"[R].iDSLLESDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"P05371"	"Clusterin OS=Rattus norvegicus OX=10116 GN=Clu PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"638.85083"	"1276.69438"	"1276.69461"	"-0.18"	"-0.00011"	"9/76"	"9"	"76"	"808454.565490723"	"HCD"	"MS2"	"2.509343"	"43.2"	"100.000"	"91.5611"	"32186"	"32186"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.8"	""	"56.4"	""	"46.9"	""	"73.2"	""	"90.7"	"77.5"	""	"858"	"45"	"36.000"	"29.000"	"0.00138502397821472"	""	"0"	"0.0002448"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLIEMEQR"	"[K].lLIEmEQR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"638.85992"	"1276.71257"	"1276.71324"	"-0.52"	"-0.00033"	"5/62"	"5"	"62"	"1890657.7991333"	"HCD"	"MS2"	"21.78211"	"111.5"	"100.000"	"58.9935"	"19007"	"19007"	"18984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.8"	"2.1"	"131.9"	""	"132.3"	""	"236.0"	"0.8"	"211.2"	"215.4"	""	"918"	"24"	"36.000"	"29.000"	"0.190902970216756"	"19"	"0.004852"	"0.05977"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSSDVEK"	"[R].gPSSDVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"638.86041"	"1276.71355"	"1276.71490"	"-1.06"	"-0.00068"	"12/64"	"12"	"64"	"657470.922546387"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"32.0959"	"8060"	"8060"	"8044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.9"	""	"60.3"	""	"77.9"	""	"110.9"	""	"108.6"	"113.4"	""	"924"	"38"	"36.000"	"29.000"	"0.00684923355337431"	""	"0.001103"	"0.008999"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"638.86041"	"1276.71355"	"1276.71490"	"-1.06"	"-0.00068"	"5/58"	"5"	"58"	"2366304.14379883"	"HCD"	"MS2"	"7.215722"	"199.6"	"100.000"	"36.8052"	"9964"	"9964"	"9949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"276.4"	""	"166.2"	""	"206.7"	""	"378.4"	""	"434.5"	"439.7"	""	"924"	"31"	"36.000"	"29.000"	"0.0328580643307838"	"28"	"0.001951"	"0.01629"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"426.24277"	"1276.71375"	"1276.71490"	"-0.90"	"-0.00038"	"5/58"	"5"	"58"	"1088617.51501465"	"HCD"	"MS2"	"21.93401"	"71.9"	"100.000"	"36.5989"	"9918"	"9918"	"9899"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.8"	""	"85.9"	""	"72.0"	""	"127.5"	"0.2"	"166.1"	"139.1"	""	"896"	"27"	"36.000"	"29.000"	"0.0998338946873095"	"25"	"0.006343"	"0.07928"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"638.86060"	"1276.71391"	"1276.71490"	"-0.77"	"-0.00049"	"6/58"	"6"	"58"	"1179939.62371826"	"HCD"	"MS2"	"100"	"114.8"	"100.000"	"36.5020"	"9842"	"9842"	"9829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.5"	""	"125.3"	""	"113.8"	""	"211.3"	""	"223.1"	"245.2"	""	"896"	"23"	"36.000"	"29.000"	"0.221451187770102"	"28"	"0.001488"	"0.01263"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"638.86066"	"1276.71404"	"1276.71490"	"-0.68"	"-0.00043"	"6/58"	"6"	"58"	"1985999.3614502"	"HCD"	"MS2"	"11.37181"	"176.2"	"100.000"	"36.7299"	"9971"	"9971"	"9949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.0"	""	"170.0"	""	"173.5"	""	"321.0"	""	"391.3"	"384.6"	""	"896"	"31"	"36.000"	"29.000"	"0.0346958885415528"	""	"0.002189"	"0.02018"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSSDVEK"	"[R].gPSSDVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"638.86151"	"1276.71575"	"1276.71490"	"0.66"	"0.00042"	"6/64"	"6"	"64"	"870687.064941406"	"HCD"	"MS2"	"0"	"73.9"	"100.000"	"32.0107"	"8063"	"8063"	"8044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.9"	""	"82.2"	""	"97.1"	""	"131.1"	""	"136.4"	"152.8"	""	"889"	"30"	"36.000"	"29.000"	"0.0428422001000855"	"25"	"0.00212"	"0.01919"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELADENK"	"[K].eLADENk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"638.86212"	"1276.71697"	"1276.71490"	"1.62"	"0.00103"	"5/58"	"5"	"58"	"1596893.11187744"	"HCD"	"MS2"	"0"	"138.0"	"100.000"	"36.4176"	"9845"	"9845"	"9826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.2"	""	"138.1"	""	"125.1"	""	"275.8"	"3.0"	"279.3"	"278.3"	""	"915"	"29"	"36.000"	"29.000"	"0.0556405095295714"	"29"	"0.001827"	"0.01536"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"638.87830"	"1276.74932"	"1276.75129"	"-1.55"	"-0.00099"	"7/64"	"7"	"64"	"1941516.94659424"	"HCD"	"MS2"	"0"	"153.5"	"100.000"	"46.6314"	"13951"	"13951"	"13937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.4"	""	"150.7"	""	"185.6"	""	"297.1"	"1.5"	"335.9"	"332.1"	""	"865"	"25"	"36.000"	"29.000"	"0.140924373183369"	"22"	"0.0007633"	"0.007462"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"638.87842"	"1276.74956"	"1276.75129"	"-1.35"	"-0.00086"	"12/66"	"12"	"66"	"3071929.8807373"	"HCD"	"MS2"	"0"	"230.8"	"100.000"	"40.7605"	"11570"	"11570"	"11550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"329.2"	""	"286.1"	""	"307.2"	""	"353.7"	""	"446.1"	"467.5"	""	"865"	"39"	"36.000"	"29.000"	"0.00555886480425614"	""	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2821"	"0.0000"	"1"	"1"	"1"	"638.87854"	"1276.74980"	"1276.75129"	"-1.16"	"-0.00074"	"12/66"	"12"	"66"	"4072749.96539307"	"HCD"	"MS2"	"0"	"320.1"	"100.000"	"40.6236"	"11549"	"11549"	"11537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"484.6"	""	"390.5"	""	"428.1"	""	"488.1"	"2.1"	"603.0"	"637.8"	""	"865"	"39"	"36.000"	"29.000"	"0.00522379483683683"	""	"0.0001991"	"0.002858"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2703"	"0.0000"	"1"	"1"	"1"	"426.25482"	"1276.74991"	"1276.75129"	"-1.08"	"-0.00046"	"6/66"	"6"	"66"	"1798410.43377686"	"HCD"	"MS2"	"4.946138"	"85.0"	"100.000"	"40.7330"	"11559"	"11559"	"11534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.0"	""	"103.0"	""	"120.3"	""	"140.2"	""	"156.3"	"178.8"	""	"865"	"37"	"36.000"	"29.000"	"0.00957163461904439"	""	"0.0001991"	"0.004247"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTVTPDK"	"[K].gTTVTPDk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"638.87860"	"1276.74993"	"1276.75129"	"-1.07"	"-0.00068"	"12/66"	"12"	"66"	"1981369.18609619"	"HCD"	"MS2"	"0"	"149.2"	"100.000"	"34.4215"	"9039"	"9039"	"9016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.6"	""	"187.9"	""	"183.7"	""	"252.6"	"0.9"	"295.8"	"284.4"	""	"865"	"31"	"36.000"	"29.000"	"0.0369816353322626"	"28"	"0.001049"	"0.008589"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"638.87860"	"1276.74993"	"1276.75129"	"-1.07"	"-0.00068"	"7/64"	"7"	"64"	"2050246.35400391"	"HCD"	"MS2"	"0"	"169.9"	"100.000"	"46.2929"	"13851"	"13851"	"13840"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.5"	""	"186.7"	""	"200.6"	""	"317.3"	""	"373.1"	"363.1"	""	"865"	"32"	"36.000"	"29.000"	"0.0267292093059865"	"24"	"0.0001991"	"0.003375"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDLNK"	"[K].sLEDLNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.0571"	"0.0000"	"1"	"1"	"1"	"638.87866"	"1276.75005"	"1276.75129"	"-0.97"	"-0.00062"	"12/56"	"12"	"56"	"4643180.28710938"	"HCD"	"MS2"	"0"	"376.7"	"100.000"	"61.5871"	"20057"	"20057"	"20038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"557.8"	""	"355.8"	""	"457.6"	""	"778.1"	""	"642.0"	"781.6"	""	"825"	"35"	"36.000"	"29.000"	"0.0127474686591185"	""	"0.002922"	"0.03129"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"638.87872"	"1276.75017"	"1276.75129"	"-0.88"	"-0.00056"	"7/64"	"7"	"64"	"8835287.37597656"	"HCD"	"MS2"	"0"	"634.8"	"100.000"	"46.8503"	"14076"	"14076"	"14064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"694.6"	""	"741.5"	""	"814.5"	""	"1057.5"	""	"1321.7"	"1404.9"	""	"825"	"47"	"36.000"	"29.000"	"0.000740327621068416"	"28"	"0.0001991"	"0.003271"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"426.25494"	"1276.75028"	"1276.75129"	"-0.79"	"-0.00034"	"7/64"	"7"	"64"	"762406.957885742"	"HCD"	"MS2"	"35.8126"	"44.6"	"100.000"	"47.1654"	"14166"	"14166"	"14142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"46.0"	""	"65.8"	""	"66.6"	""	"91.9"	"93.1"	""	"825"	"26"	"36.000"	"29.000"	"0.0949344749681009"	"21"	"0.003043"	"0.03282"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2432"	"0.0000"	"1"	"1"	"1"	"426.25497"	"1276.75037"	"1276.75129"	"-0.72"	"-0.00031"	"6/66"	"6"	"66"	"2672318.37719727"	"HCD"	"MS2"	"22.63949"	"128.0"	"100.000"	"40.4228"	"11434"	"11434"	"11405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.6"	"4.3"	"183.7"	""	"163.3"	""	"212.7"	""	"225.2"	"232.1"	""	"825"	"37"	"36.000"	"29.000"	"0.00798774060127974"	""	"0.0001991"	"0.002318"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"638.87885"	"1276.75041"	"1276.75129"	"-0.68"	"-0.00044"	"7/64"	"7"	"64"	"7555095.06896973"	"HCD"	"MS2"	"0"	"544.0"	"100.000"	"47.2205"	"14188"	"14188"	"14172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"618.0"	""	"599.3"	""	"725.3"	""	"917.4"	""	"1103.2"	"1205.1"	""	"825"	"49"	"36.000"	"29.000"	"0.000481308967037647"	"29"	"0.0001686"	"0.001277"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLEDLNK"	"[K].sLEDLNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.25500"	"1276.75046"	"1276.75129"	"-0.65"	"-0.00028"	"5/56"	"5"	"56"	"1028818.22137451"	"HCD"	"MS2"	"16.86019"	"59.0"	"100.000"	"61.6079"	"20033"	"20033"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.8"	""	"64.4"	""	"69.2"	""	"118.9"	""	"98.4"	"119.6"	""	"825"	"26"	"36.000"	"29.000"	"0.110515693398785"	"28"	"0.007069"	"0.08963"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.2432"	"0.0000"	"1"	"1"	"1"	"426.25500"	"1276.75046"	"1276.75129"	"-0.65"	"-0.00028"	"6/66"	"6"	"66"	"3584935.90759277"	"HCD"	"MS2"	"9.861647"	"168.9"	"100.000"	"40.3571"	"11441"	"11441"	"11418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.2"	"4.6"	"220.1"	""	"221.9"	""	"273.5"	""	"306.8"	"318.0"	""	"825"	"37"	"36.000"	"29.000"	"0.00766344337725325"	""	"0.0001991"	"0.003928"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"638.87891"	"1276.75054"	"1276.75129"	"-0.59"	"-0.00038"	"7/64"	"7"	"64"	"7751697.28729248"	"HCD"	"MS2"	"2.878364"	"537.6"	"100.000"	"46.9131"	"14063"	"14063"	"14051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"655.1"	""	"619.0"	""	"658.8"	""	"947.0"	""	"1081.0"	"1150.3"	""	"825"	"49"	"36.000"	"29.000"	"0.000483530588288603"	"29"	"0.0001686"	"0.001189"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASIVEDK"	"[R].gASIVEDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"638.87897"	"1276.75066"	"1276.75129"	"-0.49"	"-0.00031"	"7/64"	"7"	"64"	"7863396.7901001"	"HCD"	"MS2"	"0"	"538.6"	"100.000"	"46.5703"	"13962"	"13962"	"13951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"659.9"	""	"626.7"	""	"682.0"	""	"958.1"	""	"1103.0"	"1085.1"	""	"821"	"47"	"36.000"	"29.000"	"0.00073166648403744"	"28"	"0.0001686"	"0.001302"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTVTPDK"	"[K].gTTVTPDk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"638.87903"	"1276.75078"	"1276.75129"	"-0.40"	"-0.00025"	"12/66"	"12"	"66"	"2022311.88690186"	"HCD"	"MS2"	"0"	"147.2"	"100.000"	"34.5412"	"9051"	"9051"	"9031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.6"	""	"188.0"	""	"182.2"	""	"243.3"	"0.4"	"291.3"	"284.2"	""	"821"	"33"	"36.000"	"29.000"	"0.0228198697609501"	"29"	"0.0003938"	"0.006291"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDLNK"	"[K].sLEDLNk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.0571"	"0.0000"	"1"	"1"	"1"	"638.87903"	"1276.75078"	"1276.75129"	"-0.40"	"-0.00025"	"12/56"	"12"	"56"	"4777112.91070557"	"HCD"	"MS2"	"0"	"376.1"	"100.000"	"61.6656"	"20056"	"20056"	"20037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"550.5"	""	"339.6"	""	"441.3"	""	"806.0"	""	"631.3"	"797.6"	""	"821"	"35"	"36.000"	"29.000"	"0.0122832463332766"	""	"0.002084"	"0.01884"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"638.87915"	"1276.75102"	"1276.75129"	"-0.21"	"-0.00013"	"9/66"	"9"	"66"	"7451569.20574951"	"HCD"	"MS2"	"2.835248"	"544.9"	"100.000"	"40.3410"	"11435"	"11435"	"11418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"789.0"	""	"722.9"	""	"693.4"	""	"911.6"	""	"1018.0"	"1040.6"	""	"821"	"20"	"36.000"	"29.000"	"0.37871557084703"	"29"	"0.001453"	"0.01195"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEAASIK"	"[R].eAEAASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"638.87921"	"1276.75115"	"1276.75129"	"-0.11"	"-0.00007"	"9/66"	"9"	"66"	"7017891.27545166"	"HCD"	"MS2"	"4.492648"	"513.5"	"100.000"	"40.4389"	"11440"	"11440"	"11421"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"742.5"	""	"711.3"	""	"667.0"	""	"831.8"	""	"940.2"	"986.7"	""	"821"	"20"	"36.000"	"29.000"	"0.390223267795903"	"28"	"0.001615"	"0.01468"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HSIEVPIPR"	"[K].hSIEVPIPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63198"	"Contactin-1 OS=Rattus norvegicus OX=10116 GN=Cntn1 PE=1 SV=2"	"Q63198"	"Contactin-1 OS=Rattus norvegicus OX=10116 GN=Cntn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"426.25717"	"1276.75696"	"1276.75749"	"-0.41"	"-0.00018"	"10/68"	"10"	"68"	"680457.559692383"	"HCD"	"MS2"	"20.19847"	"30.1"	"100.000"	"51.0037"	"15763"	"15763"	"15734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"36.0"	""	"40.8"	""	"53.5"	"0.7"	"59.2"	"63.3"	""	"709"	"21"	"35.000"	"28.000"	"0.254458076255698"	"14"	"0.0001686"	"0.001961"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLADKR"	"[K].tDLADkR.[Q]"	"N-Term(TMT6plex); K6(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"426.25873"	"1276.76163"	"1276.76252"	"-0.70"	"-0.00030"	"4/58"	"4"	"58"	"8893714.70422363"	"HCD"	"MS2"	"5.264586"	"604.9"	"100.000"	"31.7655"	"7927"	"7927"	"7905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"850.5"	""	"703.7"	""	"743.6"	""	"1056.6"	""	"1190.0"	"1204.0"	""	"684"	"20"	"35.000"	"28.000"	"0.328871399207213"	"24"	"0.00455"	"0.05356"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"426.25992"	"1276.76520"	"1276.76654"	"-1.05"	"-0.00045"	"7/52"	"7"	"52"	"517756.260864258"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"79.0754"	"27118"	"27118"	"27099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"22.8"	""	"31.6"	""	"62.6"	"0.2"	"62.5"	"66.8"	""	"734"	"23"	"35.000"	"28.000"	"0.204958561468417"	"18"	"0.00307"	"0.03381"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"426.25998"	"1276.76538"	"1276.76654"	"-0.91"	"-0.00039"	"7/52"	"7"	"52"	"783039.45916748"	"HCD"	"MS2"	"15.7808"	"43.3"	"100.000"	"78.7851"	"27000"	"27000"	"26977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.3"	""	"42.1"	""	"42.1"	""	"109.0"	""	"88.1"	"89.2"	""	"726"	"21"	"35.000"	"28.000"	"0.272839110528609"	"16"	"0.003208"	"0.03462"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"426.26004"	"1276.76557"	"1276.76654"	"-0.76"	"-0.00033"	"7/52"	"7"	"52"	"423924.604797363"	"HCD"	"MS2"	"11.32933"	"24.9"	"100.000"	"79.2319"	"27209"	"27209"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"28.1"	""	"24.8"	""	"50.1"	""	"51.1"	"60.0"	""	"726"	"21"	"35.000"	"28.000"	"0.290339834567551"	"14"	"0.002189"	"0.02076"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"426.26007"	"1276.76566"	"1276.76654"	"-0.69"	"-0.00029"	"7/52"	"7"	"52"	"772125.662536621"	"HCD"	"MS2"	"8.156298"	"42.6"	"100.000"	"78.9186"	"27081"	"27081"	"27062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.6"	""	"47.7"	""	"46.6"	""	"95.3"	""	"93.5"	"84.3"	""	"726"	"24"	"35.000"	"28.000"	"0.134247629260237"	"17"	"0.004234"	"0.04926"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"638.88647"	"1276.76567"	"1276.76654"	"-0.68"	"-0.00044"	"5/52"	"5"	"52"	"2435154.30474854"	"HCD"	"MS2"	"3.70774"	"168.4"	"100.000"	"79.1447"	"27146"	"27146"	"27128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.0"	""	"158.0"	""	"166.9"	""	"383.7"	""	"353.8"	"380.8"	""	"726"	"31"	"35.000"	"28.000"	"0.0285697621659321"	"26"	"0.002035"	"0.01793"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"638.88678"	"1276.76628"	"1276.76654"	"-0.20"	"-0.00013"	"5/52"	"5"	"52"	"5651688.48022461"	"HCD"	"MS2"	"2.246484"	"376.3"	"100.000"	"78.9717"	"27103"	"27103"	"27086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"361.4"	""	"347.5"	""	"374.6"	""	"867.6"	"1.0"	"818.9"	"808.6"	""	"726"	"34"	"35.000"	"28.000"	"0.0131797333881547"	"26"	"0.001615"	"0.01385"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"638.88690"	"1276.76653"	"1276.76654"	"-0.01"	"-0.00001"	"5/52"	"5"	"52"	"1990716.87481689"	"HCD"	"MS2"	"5.191641"	"137.0"	"100.000"	"79.2873"	"27231"	"27231"	"27212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.5"	""	"114.5"	""	"143.5"	""	"309.0"	""	"305.0"	"311.0"	""	"726"	"28"	"35.000"	"28.000"	"0.0594164397278295"	"25"	"0.002035"	"0.01806"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVNFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"638.88690"	"1276.76653"	"1276.76654"	"-0.01"	"-0.00001"	"4/52"	"4"	"52"	"5592408.82116699"	"HCD"	"MS2"	"0"	"382.0"	"100.000"	"78.8452"	"27025"	"27025"	"27009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"374.6"	""	"333.4"	""	"369.4"	""	"896.6"	""	"834.9"	"826.2"	""	"726"	"24"	"35.000"	"28.000"	"0.135802143542755"	"27"	"0.003818"	"0.04123"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTASPQSLCGLR"	"[R].VTASPQSLcGLR.[A]"	"C9(Methylthio)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.31842"	"1277.62956"	"1277.63405"	"-3.51"	"-0.00224"	"8/110"	"8"	"110"	"259953.142333984"	"HCD"	"MS2"	"23.35459"	"13.9"	"100.000"	"85.3788"	"29698"	"29698"	"29669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"15.0"	""	"11.6"	""	"33.0"	""	"24.4"	"30.5"	"NoQuanLabels"	"515"	"39"	"34.000"	"27.000"	"0.00302536120396929"	"15"	"0.003984"	"0.04371"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGTYGGYFR"	"[K].qGTYGGYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"639.32697"	"1277.64665"	"1277.64760"	"-0.74"	"-0.00047"	"8/80"	"8"	"80"	"1418196.902771"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"51.7135"	"16047"	"16047"	"16029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.8"	""	"151.6"	""	"130.3"	""	"158.2"	"3.7"	"194.5"	"218.9"	""	"613"	"45"	"34.000"	"27.000"	"0.00106765387058538"	"20"	"0"	"0.0002117"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGTYGGYFR"	"[K].qGTYGGYFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"639.32697"	"1277.64665"	"1277.64760"	"-0.74"	"-0.00047"	"8/80"	"8"	"80"	"1528355.26507568"	"HCD"	"MS2"	"13.06213"	"114.5"	"100.000"	"52.0235"	"16139"	"16139"	"16116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.2"	""	"142.4"	""	"150.2"	""	"179.5"	"3.6"	"217.3"	"232.9"	""	"613"	"32"	"34.000"	"27.000"	"0.0190296358991514"	"16"	"9.9E-05"	"0.0004269"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSSLDWDR"	"[K].lGSSLDWDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"639.33710"	"1277.66692"	"1277.66873"	"-1.42"	"-0.00091"	"7/74"	"7"	"74"	"648681.145080566"	"HCD"	"MS2"	"65.62591"	"47.1"	"100.000"	"86.8991"	"30274"	"30274"	"30257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"59.0"	""	"62.6"	""	"80.2"	""	"96.2"	"90.3"	""	"781"	"19"	"35.000"	"28.000"	"0.473828346106574"	"17"	"0.001615"	"0.0149"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGSSLDWDR"	"[K].lGSSLDWDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"639.33771"	"1277.66814"	"1277.66873"	"-0.46"	"-0.00030"	"13/74"	"13"	"74"	"705386.082275391"	"HCD"	"MS2"	"57.03062"	"53.3"	"100.000"	"86.8614"	"30293"	"30293"	"30275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.6"	""	"69.3"	""	"62.9"	""	"86.5"	""	"102.1"	"110.5"	""	"760"	"19"	"35.000"	"28.000"	"0.472915552473126"	"18"	"0.0001991"	"0.003892"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"639.35785"	"1277.70842"	"1277.71015"	"-1.35"	"-0.00086"	"7/72"	"7"	"72"	"3168439.35437012"	"HCD"	"MS2"	"0"	"238.9"	"100.000"	"24.8236"	"5164"	"5164"	"5135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"601.2"	""	"299.8"	""	"226.1"	""	"410.1"	""	"369.9"	"349.7"	""	"856"	"34"	"36.000"	"29.000"	"0.0185542655949863"	"25"	"0.0001991"	"0.004532"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"639.35828"	"1277.70928"	"1277.71015"	"-0.68"	"-0.00044"	"7/72"	"7"	"72"	"310188.048461914"	"HCD"	"MS2"	"0"	"29.8"	"100.000"	"24.9928"	"5267"	"5267"	"5254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"34.4"	""	"35.2"	""	"51.1"	""	"50.7"	"51.0"	""	"818"	"35"	"36.000"	"29.000"	"0.0134190974883266"	"26"	"9.9E-05"	"0.0006057"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"639.35852"	"1277.70976"	"1277.71015"	"-0.30"	"-0.00019"	"7/72"	"7"	"72"	"3707530.93347168"	"HCD"	"MS2"	"0"	"293.8"	"100.000"	"24.7015"	"5151"	"5151"	"5133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"723.7"	""	"358.9"	""	"273.0"	""	"526.3"	""	"437.5"	"455.1"	""	"864"	"32"	"36.000"	"29.000"	"0.0265145186231191"	"26"	"0.0001991"	"0.003023"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDAGQEAK"	"[R].tDAGQEAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"639.35883"	"1277.71037"	"1277.71015"	"0.17"	"0.00011"	"7/72"	"7"	"72"	"372280.43359375"	"HCD"	"MS2"	"100"	"34.6"	"100.000"	"25.0944"	"5271"	"5271"	"5260"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.2"	""	"38.5"	""	"36.8"	""	"63.8"	""	"60.1"	"59.3"	""	"833"	"20"	"36.000"	"29.000"	"0.467320686216768"	"20"	"0.001261"	"0.009583"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.36945"	"1277.73161"	"1277.73530"	"-2.89"	"-0.00184"	"6/56"	"6"	"56"	"8394622.54022217"	"HCD"	"MS2"	"2.218437"	"655.7"	"100.000"	"61.9302"	"20196"	"20196"	"20177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"884.8"	""	"705.8"	""	"736.6"	""	"1234.0"	""	"1341.4"	"1327.1"	""	"791"	"34"	"35.000"	"28.000"	"0.0146267045103095"	""	"0.003818"	"0.04172"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.36945"	"1277.73161"	"1277.73530"	"-2.89"	"-0.00184"	"6/62"	"6"	"62"	"8394622.54022217"	"HCD"	"MS2"	"2.218437"	"655.7"	"100.000"	"61.9302"	"20196"	"20196"	"20177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"884.8"	""	"705.8"	""	"736.6"	""	"1234.0"	""	"1341.4"	"1327.1"	""	"791"	"34"	"35.000"	"28.000"	"0.0146267045103095"	""	"0.003818"	"0.04173"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.36969"	"1277.73210"	"1277.73530"	"-2.50"	"-0.00160"	"6/56"	"6"	"56"	"7435564.51452637"	"HCD"	"MS2"	"6.034359"	"601.2"	"100.000"	"61.9911"	"20187"	"20187"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"828.9"	""	"640.2"	""	"686.0"	""	"1156.4"	""	"1190.0"	"1208.4"	""	"804"	"34"	"36.000"	"29.000"	"0.0152133919056272"	""	"0.002525"	"0.02482"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.36969"	"1277.73210"	"1277.73530"	"-2.51"	"-0.00160"	"6/62"	"6"	"62"	"7435564.51452637"	"HCD"	"MS2"	"6.034359"	"601.2"	"100.000"	"61.9911"	"20187"	"20187"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"828.9"	""	"640.2"	""	"686.0"	""	"1156.4"	""	"1190.0"	"1208.4"	""	"804"	"34"	"36.000"	"29.000"	"0.0152133919056272"	""	"0.002525"	"0.02482"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58267"	"1277.73346"	"1277.73530"	"-1.44"	"-0.00061"	"5/56"	"5"	"56"	"3232624.49224854"	"HCD"	"MS2"	"41.9478"	"167.6"	"100.000"	"62.0694"	"20219"	"20219"	"20199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.4"	"4.4"	"178.1"	""	"200.2"	""	"297.5"	""	"356.1"	"333.1"	""	"834"	"27"	"36.000"	"29.000"	"0.0908104975071266"	""	"0.002189"	"0.02143"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58267"	"1277.73346"	"1277.73530"	"-1.44"	"-0.00061"	"5/62"	"5"	"62"	"3232624.49224854"	"HCD"	"MS2"	"41.9478"	"167.6"	"100.000"	"62.0694"	"20219"	"20219"	"20199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.4"	"4.4"	"178.1"	""	"200.2"	""	"297.5"	""	"356.1"	"333.1"	""	"834"	"27"	"36.000"	"29.000"	"0.0908104975071266"	""	"0.002189"	"0.02143"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58279"	"1277.73383"	"1277.73530"	"-1.15"	"-0.00049"	"5/56"	"5"	"56"	"3100561.85919189"	"HCD"	"MS2"	"22.72337"	"159.9"	"100.000"	"62.0051"	"20226"	"20226"	"20208"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.0"	"4.3"	"161.8"	""	"187.8"	""	"296.2"	"0.2"	"328.3"	"323.0"	""	"834"	"27"	"36.000"	"29.000"	"0.0914399658041136"	""	"0.004959"	"0.06147"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58279"	"1277.73383"	"1277.73530"	"-1.15"	"-0.00049"	"5/62"	"5"	"62"	"3100561.85919189"	"HCD"	"MS2"	"22.72337"	"159.9"	"100.000"	"62.0051"	"20226"	"20226"	"20208"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.0"	"4.3"	"161.8"	""	"187.8"	""	"296.2"	"0.2"	"328.3"	"323.0"	""	"834"	"27"	"36.000"	"29.000"	"0.0914399658041136"	""	"0.004959"	"0.06148"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58292"	"1277.73420"	"1277.73530"	"-0.87"	"-0.00037"	"5/56"	"5"	"56"	"2581356.76922607"	"HCD"	"MS2"	"10.18312"	"131.8"	"100.000"	"62.3571"	"20336"	"20336"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.1"	"3.7"	"137.3"	""	"171.2"	""	"217.9"	""	"279.6"	"278.4"	""	"764"	"24"	"35.000"	"28.000"	"0.150682689392756"	"28"	"0.001615"	"0.01387"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58292"	"1277.73420"	"1277.73530"	"-0.87"	"-0.00037"	"5/62"	"5"	"62"	"2581356.76922607"	"HCD"	"MS2"	"10.18312"	"131.8"	"100.000"	"62.3571"	"20336"	"20336"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.1"	"3.7"	"137.3"	""	"171.2"	""	"217.9"	""	"279.6"	"278.4"	""	"764"	"24"	"35.000"	"28.000"	"0.150682689392756"	"28"	"0.001615"	"0.01387"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/56"	"6"	"56"	"16803651.2821045"	"HCD"	"MS2"	"9.066426"	"682.7"	"53.531"	"62.2764"	"20303"	"20303"	"20288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"905.5"	""	"692.3"	""	"785.1"	""	"1199.0"	""	"1462.0"	"1448.6"	""	"769"	"32"	"35.000"	"28.000"	"0.0247113427308394"	""	"0.00394"	"0.04298"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/62"	"6"	"62"	"16803651.2821045"	"HCD"	"MS2"	"9.066426"	"682.7"	"53.531"	"62.2764"	"20303"	"20303"	"20288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"905.5"	""	"692.3"	""	"785.1"	""	"1199.0"	""	"1462.0"	"1448.6"	""	"769"	"32"	"35.000"	"28.000"	"0.0247113427308394"	""	"0.00394"	"0.04299"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/56"	"6"	"56"	"16594451.0993652"	"HCD"	"MS2"	"8.143385"	"685.7"	"56.309"	"62.2242"	"20315"	"20315"	"20297"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"935.6"	""	"695.1"	""	"770.7"	""	"1203.7"	""	"1447.1"	"1468.8"	""	"769"	"32"	"35.000"	"28.000"	"0.024882633575533"	""	"0.003568"	"0.0393"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"639.37103"	"1277.73479"	"1277.73530"	"-0.40"	"-0.00026"	"6/62"	"6"	"62"	"16594451.0993652"	"HCD"	"MS2"	"8.143385"	"685.7"	"56.309"	"62.2242"	"20315"	"20315"	"20297"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"935.6"	""	"695.1"	""	"770.7"	""	"1203.7"	""	"1447.1"	"1468.8"	""	"769"	"32"	"35.000"	"28.000"	"0.024882633575533"	""	"0.003568"	"0.03931"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DIEDSIK"	"[K].dIEDSIk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"426.58334"	"1277.73548"	"1277.73530"	"0.14"	"0.00006"	"5/56"	"5"	"56"	"2303745.72741699"	"HCD"	"MS2"	"20.69032"	"122.8"	"100.000"	"62.3077"	"20349"	"20349"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.5"	"4.0"	"134.3"	""	"134.0"	""	"215.1"	""	"267.2"	"256.8"	""	"769"	"27"	"35.000"	"28.000"	"0.0816387495639083"	""	"0.002834"	"0.03063"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLQDSIK"	"[R].nLqDSIk.[R]"	"N-Term(TMT6plex); N1(Deamidated); Q3(Deamidated); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"426.58334"	"1277.73548"	"1277.73530"	"0.14"	"0.00006"	"5/62"	"5"	"62"	"2303745.72741699"	"HCD"	"MS2"	"20.69032"	"122.8"	"100.000"	"62.3077"	"20349"	"20349"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.5"	"4.0"	"134.3"	""	"134.0"	""	"215.1"	""	"267.2"	"256.8"	""	"769"	"27"	"35.000"	"28.000"	"0.0816387495639083"	""	"0.002834"	"0.03063"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEASAVSK"	"[K].gAEASAVSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"639.37604"	"1277.74480"	"1277.74654"	"-1.36"	"-0.00087"	"8/74"	"8"	"74"	"903609.330749512"	"HCD"	"MS2"	"34.53855"	"79.5"	"100.000"	"32.4491"	"8203"	"8203"	"8180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.2"	""	"71.7"	""	"88.2"	""	"166.6"	""	"186.1"	"168.6"	""	"736"	"60"	"35.000"	"28.000"	"3.97967694077641E-05"	""	"0"	"5.348E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNLETK"	"[K].aSGNLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"639.37616"	"1277.74504"	"1277.74654"	"-1.17"	"-0.00075"	"5/74"	"5"	"74"	"957862.459655762"	"HCD"	"MS2"	"0"	"94.4"	"100.000"	"34.1598"	"8933"	"8933"	"8913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.1"	""	"121.8"	""	"109.9"	""	"154.9"	""	"178.3"	"193.4"	""	"736"	"22"	"35.000"	"28.000"	"0.21421398413968"	"23"	"0.005266"	"0.06725"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNTGIK"	"[K].dATNTGIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"639.37622"	"1277.74516"	"1277.74654"	"-1.07"	"-0.00069"	"6/72"	"6"	"72"	"515559.31854248"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"34.9702"	"9224"	"9224"	"9207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.5"	""	"69.6"	""	"62.9"	""	"92.9"	"1.9"	"92.3"	"100.4"	""	"736"	"28"	"35.000"	"28.000"	"0.0612135855336222"	"22"	"9.9E-05"	"0.0006753"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNLETK"	"[K].aSGNLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"639.37659"	"1277.74590"	"1277.74654"	"-0.50"	"-0.00032"	"7/74"	"7"	"74"	"2778321.8817749"	"HCD"	"MS2"	"0"	"228.6"	"100.000"	"33.9744"	"8822"	"8822"	"8802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.7"	""	"297.3"	""	"296.2"	""	"378.0"	""	"416.2"	"480.0"	""	"698"	"40"	"35.000"	"28.000"	"0.00380912677420616"	"26"	"0.0001991"	"0.002371"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNLETK"	"[K].aSGNLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"Q9R1Z0"	"Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus OX=10116 GN=Vdac3 PE=1 SV=2"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"639.37689"	"1277.74651"	"1277.74654"	"-0.02"	"-0.00001"	"12/74"	"12"	"74"	"2836961.48297119"	"HCD"	"MS2"	"9.895899"	"234.2"	"100.000"	"33.8523"	"8810"	"8810"	"8793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"312.7"	""	"306.6"	""	"286.7"	""	"385.2"	"1.8"	"449.4"	"479.5"	""	"706"	"37"	"35.000"	"28.000"	"0.00675732341532443"	"24"	"0.0001991"	"0.002325"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNTGIK"	"[K].dATNTGIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"639.37708"	"1277.74687"	"1277.74654"	"0.26"	"0.00017"	"7/72"	"7"	"72"	"1193256.50830078"	"HCD"	"MS2"	"0"	"111.0"	"100.000"	"34.9357"	"9248"	"9248"	"9226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"177.1"	""	"136.5"	""	"137.9"	""	"199.3"	""	"187.5"	"213.4"	""	"680"	"32"	"35.000"	"28.000"	"0.0215515701827355"	"21"	"0.0001991"	"0.003272"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"639.37714"	"1277.74700"	"1277.75056"	"-2.79"	"-0.00178"	"6/52"	"6"	"52"	"1428924.64306641"	"HCD"	"MS2"	"2.981169"	"95.9"	"100.000"	"74.4651"	"25250"	"25250"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.6"	""	"75.5"	""	"96.8"	""	"200.7"	""	"215.7"	"237.4"	""	"671"	"12"	"35.000"	"28.000"	"2.01229906083723"	"15"	"0.004234"	"0.04872"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSDAATK"	"[R].nLSDAATk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"Q9WU82"	"Catenin beta-1 OS=Rattus norvegicus OX=10116 GN=Ctnnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"639.37714"	"1277.74700"	"1277.74654"	"0.36"	"0.00023"	"7/78"	"7"	"78"	"2555665.67279053"	"HCD"	"MS2"	"10.82358"	"212.5"	"100.000"	"40.1615"	"11361"	"11361"	"11341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.0"	""	"290.1"	""	"257.6"	""	"348.7"	""	"417.3"	"433.3"	""	"671"	"49"	"35.000"	"28.000"	"0.000419461904638045"	"27"	"0"	"0.0003461"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"639.37726"	"1277.74724"	"1277.75056"	"-2.60"	"-0.00166"	"5/52"	"5"	"52"	"1295901.13604736"	"HCD"	"MS2"	"2.33561"	"80.9"	"100.000"	"74.6091"	"25339"	"25339"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.2"	""	"79.5"	""	"71.8"	""	"154.0"	""	"189.5"	"203.7"	""	"671"	"11"	"35.000"	"28.000"	"2.62236128439384"	"17"	"0.005507"	"0.07009"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEASAVSK"	"[K].gAEASAVSk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"Q9EPH2"	"MARCKS-related protein OS=Rattus norvegicus OX=10116 GN=Marcksl1 PE=2 SV=3"	"0"	"2"	"2"	"0.6984"	"0.0000"	"1"	"1"	"1"	"639.37732"	"1277.74736"	"1277.74654"	"0.65"	"0.00041"	"8/74"	"8"	"74"	"757921.212890625"	"HCD"	"MS2"	"25.71907"	"71.1"	"100.000"	"32.3413"	"8196"	"8196"	"8174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.5"	""	"63.0"	""	"85.8"	""	"144.0"	""	"159.2"	"146.7"	""	"672"	"63"	"35.000"	"28.000"	"1.86783830442856E-05"	""	"0"	"7.716E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"426.58777"	"1277.74875"	"1277.75056"	"-1.41"	"-0.00060"	"7/52"	"7"	"52"	"676627.78125"	"HCD"	"MS2"	"19.14618"	"35.0"	"100.000"	"80.4601"	"27708"	"27708"	"27684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.6"	""	"23.5"	""	"33.7"	""	"89.3"	"0.1"	"76.3"	"75.6"	""	"674"	"18"	"35.000"	"28.000"	"0.531654997888681"	"14"	"0.006267"	"0.07759"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"639.37830"	"1277.74932"	"1277.75056"	"-0.97"	"-0.00062"	"6/52"	"6"	"52"	"8529575.43511963"	"HCD"	"MS2"	"0"	"605.5"	"100.000"	"86.2877"	"30033"	"30033"	"30019"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"522.7"	""	"497.2"	""	"610.6"	""	"1333.0"	"0.6"	"1400.4"	"1402.1"	""	"668"	"30"	"35.000"	"28.000"	"0.0317502001081198"	"19"	"0.002588"	"0.02633"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"639.37836"	"1277.74944"	"1277.75056"	"-0.88"	"-0.00056"	"6/52"	"6"	"52"	"11153899.9925537"	"HCD"	"MS2"	"0"	"580.4"	"83.087"	"77.6332"	"26531"	"26531"	"26516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"459.7"	""	"398.4"	""	"490.7"	""	"1353.0"	""	"1421.2"	"1418.5"	""	"668"	"31"	"35.000"	"28.000"	"0.027336723923702"	"19"	"0.00296"	"0.0317"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"639.37842"	"1277.74956"	"1277.75056"	"-0.78"	"-0.00050"	"6/52"	"6"	"52"	"16930673.7944336"	"HCD"	"MS2"	"0"	"572.6"	"51.877"	"77.6544"	"26568"	"26568"	"26552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"473.8"	""	"396.4"	""	"500.9"	""	"1328.8"	""	"1372.5"	"1396.7"	""	"668"	"31"	"35.000"	"28.000"	"0.0277809099548292"	"19"	"0.00307"	"0.03434"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"639.37842"	"1277.74956"	"1277.75056"	"-0.78"	"-0.00050"	"6/52"	"6"	"52"	"27052058.9527588"	"HCD"	"MS2"	"0"	"716.3"	"42.976"	"77.3512"	"26417"	"26417"	"26408"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"655.6"	""	"511.8"	""	"625.9"	""	"1750.4"	""	"1625.0"	"1660.6"	""	"668"	"31"	"35.000"	"28.000"	"0.0278449515662958"	"19"	"0.004213"	"0.04735"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.37848"	"1277.74968"	"1277.75056"	"-0.69"	"-0.00044"	"5/52"	"5"	"52"	"1057035.7567749"	"HCD"	"MS2"	"8.641595"	"72.6"	"100.000"	"77.9508"	"26660"	"26660"	"26639"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.9"	""	"60.2"	""	"63.8"	""	"161.0"	"0.5"	"171.2"	"172.3"	""	"668"	"32"	"35.000"	"28.000"	"0.0204054636318461"	"15"	"0.0001991"	"0.005236"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"639.37848"	"1277.74968"	"1277.75056"	"-0.69"	"-0.00044"	"6/52"	"6"	"52"	"1549936.99511719"	"HCD"	"MS2"	"16.42441"	"113.4"	"100.000"	"80.8269"	"27831"	"27831"	"27814"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.5"	""	"103.7"	""	"134.8"	""	"229.7"	"2.4"	"252.6"	"227.1"	""	"668"	"29"	"35.000"	"28.000"	"0.0391513252093076"	"23"	"0.001348"	"0.01142"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"639.37848"	"1277.74968"	"1277.75056"	"-0.69"	"-0.00044"	"6/52"	"6"	"52"	"21178553.8637695"	"HCD"	"MS2"	"0"	"835.7"	"66.628"	"77.3725"	"26456"	"26456"	"26447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"744.8"	""	"625.9"	""	"680.0"	""	"2055.1"	""	"1953.1"	"1907.3"	""	"668"	"31"	"35.000"	"28.000"	"0.027273851203377"	"19"	"0.002834"	"0.03029"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"639.37854"	"1277.74980"	"1277.75056"	"-0.59"	"-0.00038"	"5/52"	"5"	"52"	"889341.818054199"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"74.1791"	"25135"	"25135"	"25110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.3"	""	"65.7"	""	"83.1"	""	"135.5"	""	"147.8"	"156.2"	""	"668"	"31"	"35.000"	"28.000"	"0.0270860993323183"	"17"	"0.001261"	"0.009543"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"639.37860"	"1277.74993"	"1277.75056"	"-0.50"	"-0.00032"	"5/52"	"5"	"52"	"1228382.64099121"	"HCD"	"MS2"	"21.147"	"89.8"	"100.000"	"80.3174"	"27650"	"27650"	"27636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.4"	""	"80.0"	""	"84.3"	""	"207.1"	""	"189.8"	"197.0"	""	"668"	"32"	"35.000"	"28.000"	"0.0200792028319415"	"21"	"0.0003938"	"0.006369"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"639.37860"	"1277.74993"	"1277.75056"	"-0.50"	"-0.00032"	"6/52"	"6"	"52"	"3777093.02789307"	"HCD"	"MS2"	"0"	"256.7"	"100.000"	"80.6029"	"27766"	"27766"	"27748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"231.5"	""	"196.1"	""	"215.2"	""	"618.0"	""	"595.1"	"591.2"	""	"668"	"23"	"35.000"	"28.000"	"0.161713570773089"	"17"	"0.002834"	"0.02998"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"639.37866"	"1277.75005"	"1277.75056"	"-0.40"	"-0.00026"	"6/52"	"6"	"52"	"10971407.6521606"	"HCD"	"MS2"	"0.455674"	"715.0"	"99.140"	"86.0082"	"29952"	"29952"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"693.2"	""	"609.5"	""	"696.1"	""	"1651.9"	""	"1605.8"	"1554.2"	""	"668"	"30"	"35.000"	"28.000"	"0.0313867585728589"	"19"	"0.002525"	"0.02505"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"639.37872"	"1277.75017"	"1277.75056"	"-0.31"	"-0.00020"	"6/52"	"6"	"52"	"1647695.34362793"	"HCD"	"MS2"	"1.783849"	"124.1"	"100.000"	"86.5484"	"30135"	"30135"	"30127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.9"	""	"113.6"	""	"119.5"	""	"270.9"	""	"286.0"	"291.8"	""	"667"	"30"	"35.000"	"28.000"	"0.0340483317816511"	"19"	"0.001348"	"0.01083"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"639.37872"	"1277.75017"	"1277.75056"	"-0.31"	"-0.00020"	"6/52"	"6"	"52"	"7827103.62896729"	"HCD"	"MS2"	"0"	"541.4"	"100.000"	"86.3056"	"30072"	"30072"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"445.4"	""	"421.0"	""	"544.6"	""	"1227.4"	""	"1288.3"	"1236.8"	""	"667"	"29"	"35.000"	"28.000"	"0.0420819482785989"	"18"	"0.002286"	"0.02159"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"639.37872"	"1277.75017"	"1277.75056"	"-0.31"	"-0.00020"	"6/52"	"6"	"52"	"9336886.42803955"	"HCD"	"MS2"	"0.1346209"	"637.2"	"100.000"	"85.9812"	"29911"	"29911"	"29900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"591.2"	""	"584.3"	""	"614.8"	""	"1478.4"	""	"1426.1"	"1370.8"	""	"667"	"30"	"35.000"	"28.000"	"0.0313397724073307"	"19"	"0.00307"	"0.03319"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.37891"	"1277.75054"	"1277.75056"	"-0.02"	"-0.00001"	"5/52"	"5"	"52"	"880270.859680176"	"HCD"	"MS2"	"2.297811"	"72.3"	"100.000"	"86.6121"	"30193"	"30193"	"30177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.8"	""	"77.1"	""	"82.1"	""	"143.2"	""	"161.6"	"166.1"	""	"667"	"32"	"35.000"	"28.000"	"0.0208495093040691"	"15"	"0.0003938"	"0.00624"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"639.37891"	"1277.75054"	"1277.75056"	"-0.02"	"-0.00001"	"6/52"	"6"	"52"	"3633515.09136963"	"HCD"	"MS2"	"0.6199757"	"236.9"	"100.000"	"80.5247"	"27707"	"27707"	"27689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.2"	""	"178.4"	""	"213.7"	""	"539.5"	""	"564.3"	"538.5"	""	"667"	"31"	"35.000"	"28.000"	"0.0288466800911694"	"19"	"0.001951"	"0.01689"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"426.58841"	"1277.75068"	"1277.75056"	"0.09"	"0.00004"	"7/52"	"7"	"52"	"533299.488464355"	"HCD"	"MS2"	"11.62975"	"31.6"	"100.000"	"85.9873"	"29943"	"29943"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"33.0"	""	"34.0"	""	"67.9"	""	"74.3"	"63.8"	""	"667"	"19"	"35.000"	"28.000"	"0.399112967190966"	"14"	"0.007104"	"0.09047"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"639.37903"	"1277.75078"	"1277.75056"	"0.17"	"0.00011"	"6/52"	"6"	"52"	"2998705.79968262"	"HCD"	"MS2"	"11.76045"	"197.7"	"100.000"	"77.0558"	"26300"	"26300"	"26287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.3"	""	"170.1"	""	"171.3"	""	"477.5"	""	"442.7"	"430.5"	""	"661"	"31"	"35.000"	"28.000"	"0.0281949587682813"	"19"	"0.001348"	"0.01123"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"639.37909"	"1277.75090"	"1277.75056"	"0.27"	"0.00017"	"5/52"	"5"	"52"	"1112530.73492432"	"HCD"	"MS2"	"14.21687"	"86.5"	"100.000"	"85.6969"	"29825"	"29825"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.2"	""	"94.1"	""	"77.4"	""	"194.8"	""	"178.6"	"189.7"	""	"685"	"35"	"35.000"	"28.000"	"0.0117668597155707"	"21"	"0.0001991"	"0.005738"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"639.37909"	"1277.75090"	"1277.75056"	"0.27"	"0.00017"	"5/52"	"5"	"52"	"1567068.18182373"	"HCD"	"MS2"	"0"	"107.1"	"100.000"	"77.0882"	"26344"	"26344"	"26334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.0"	""	"83.4"	""	"97.1"	""	"278.7"	""	"219.1"	"223.6"	""	"685"	"33"	"35.000"	"28.000"	"0.0186063238536158"	"22"	"0.0009352"	"0.00803"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"639.37915"	"1277.75102"	"1277.75056"	"0.36"	"0.00023"	"5/52"	"5"	"52"	"862012.554260254"	"HCD"	"MS2"	"21.53683"	"68.0"	"100.000"	"74.2885"	"25209"	"25209"	"25185"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"68.9"	""	"67.8"	""	"143.1"	"0.7"	"154.1"	"137.4"	""	"680"	"34"	"35.000"	"28.000"	"0.0146042385100062"	"19"	"0.001453"	"0.01181"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"639.37915"	"1277.75102"	"1277.75056"	"0.36"	"0.00023"	"5/52"	"5"	"52"	"1765143.43438721"	"HCD"	"MS2"	"3.669968"	"123.2"	"100.000"	"77.9507"	"26687"	"26687"	"26670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.2"	""	"93.9"	""	"109.5"	""	"278.8"	""	"287.9"	"296.0"	""	"680"	"36"	"35.000"	"28.000"	"0.00927852446154733"	"19"	"0.0005778"	"0.007046"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"639.37915"	"1277.75102"	"1277.75056"	"0.36"	"0.00023"	"5/52"	"5"	"52"	"1553422.81451416"	"HCD"	"MS2"	"25.27932"	"109.5"	"100.000"	"80.8982"	"27887"	"27887"	"27871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.4"	""	"103.3"	""	"120.8"	""	"217.3"	"2.0"	"246.3"	"239.7"	""	"680"	"31"	"35.000"	"28.000"	"0.0268212439990308"	"22"	"0.0009352"	"0.008107"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"639.37921"	"1277.75115"	"1277.75056"	"0.46"	"0.00029"	"5/52"	"5"	"52"	"834608.539733887"	"HCD"	"MS2"	"0"	"65.5"	"100.000"	"85.6858"	"29792"	"29792"	"29778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.2"	""	"66.4"	""	"67.1"	""	"148.1"	""	"144.4"	"130.8"	""	"680"	"29"	"35.000"	"28.000"	"0.0409712219726411"	"20"	"0.000885"	"0.007698"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPVNFK"	"[R].vDPVnFk.[F]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"639.37921"	"1277.75115"	"1277.75056"	"0.46"	"0.00029"	"5/52"	"5"	"52"	"1054429.29559326"	"HCD"	"MS2"	"13.04865"	"78.6"	"100.000"	"80.2231"	"27585"	"27585"	"27570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.1"	""	"76.6"	""	"79.0"	""	"181.5"	""	"162.2"	"161.4"	""	"680"	"30"	"35.000"	"28.000"	"0.0358491544773028"	"20"	"0.001162"	"0.00923"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"639.38922"	"1277.77117"	"1277.77169"	"-0.41"	"-0.00026"	"10/56"	"10"	"56"	"506744.311767578"	"HCD"	"MS2"	"16.98498"	"46.3"	"100.000"	"69.5426"	"23286"	"23286"	"23271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.4"	""	"48.8"	""	"67.5"	""	"69.8"	""	"91.5"	"99.2"	""	"611"	"24"	"34.000"	"27.000"	"0.110920345732266"	"24"	"0.0001991"	"0.005541"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"639.38928"	"1277.77129"	"1277.77169"	"-0.31"	"-0.00020"	"12/56"	"12"	"56"	"4192333.39996338"	"HCD"	"MS2"	"0.8083674"	"302.7"	"100.000"	"69.2548"	"23169"	"23169"	"23152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"396.7"	""	"347.0"	""	"416.1"	""	"513.8"	""	"529.0"	"672.3"	""	"611"	"32"	"34.000"	"27.000"	"0.0180306429992498"	"25"	"0.002189"	"0.02015"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"426.59531"	"1277.77137"	"1277.77169"	"-0.25"	"-0.00011"	"5/56"	"5"	"56"	"986242.045043945"	"HCD"	"MS2"	"15.82612"	"51.0"	"100.000"	"68.9425"	"23008"	"23008"	"22986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.8"	""	"66.4"	""	"60.2"	""	"90.0"	""	"92.1"	"108.5"	""	"611"	"30"	"34.000"	"27.000"	"0.0279905359732271"	"25"	"0.001488"	"0.01278"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"639.38953"	"1277.77178"	"1277.77169"	"0.07"	"0.00004"	"12/56"	"12"	"56"	"8553385.73754883"	"HCD"	"MS2"	"0"	"607.8"	"100.000"	"68.9510"	"23046"	"23046"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"809.3"	""	"747.2"	""	"801.4"	""	"1037.1"	""	"1070.4"	"1301.1"	""	"611"	"35"	"34.000"	"27.000"	"0.00883102704062652"	"27"	"0.001951"	"0.01723"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"426.59546"	"1277.77182"	"1277.77169"	"0.11"	"0.00004"	"5/56"	"5"	"56"	"711636.454528809"	"HCD"	"MS2"	"33.54593"	"34.8"	"100.000"	"68.8723"	"23014"	"23014"	"22985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.1"	""	"42.8"	""	"45.7"	""	"63.7"	"0.5"	"62.6"	"72.6"	""	"611"	"23"	"34.000"	"27.000"	"0.143883573214269"	"21"	"0.001103"	"0.009044"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"639.38965"	"1277.77202"	"1277.77169"	"0.26"	"0.00017"	"12/56"	"12"	"56"	"4120310.70477295"	"HCD"	"MS2"	"0"	"315.5"	"100.000"	"69.1957"	"23111"	"23111"	"23092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.8"	""	"384.0"	""	"413.8"	""	"516.4"	""	"576.8"	"720.4"	""	"599"	"35"	"34.000"	"27.000"	"0.00890013976505539"	"26"	"0.001488"	"0.012"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"639.38977"	"1277.77226"	"1277.77169"	"0.45"	"0.00029"	"12/56"	"12"	"56"	"8440235.40386963"	"HCD"	"MS2"	"0"	"624.0"	"100.000"	"68.8897"	"22987"	"22987"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"856.0"	""	"743.8"	""	"833.4"	""	"1087.4"	""	"1067.9"	"1335.2"	""	"551"	"35"	"34.000"	"27.000"	"0.00805603980095838"	"26"	"0.002588"	"0.02668"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"639.39001"	"1277.77275"	"1277.77169"	"0.83"	"0.00053"	"10/56"	"10"	"56"	"426713.400878906"	"HCD"	"MS2"	"15.28228"	"38.1"	"100.000"	"69.4948"	"23233"	"23233"	"23212"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.6"	""	"45.0"	""	"44.2"	""	"60.6"	""	"78.2"	"79.7"	""	"554"	"22"	"34.000"	"27.000"	"0.194751032607822"	"21"	"0.0005161"	"0.006667"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"639.39014"	"1277.77300"	"1277.77169"	"1.02"	"0.00065"	"12/56"	"12"	"56"	"1113383.82122803"	"HCD"	"MS2"	"37.92935"	"94.1"	"100.000"	"68.6673"	"22930"	"22930"	"22906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.0"	""	"111.3"	""	"129.0"	""	"164.8"	""	"151.7"	"214.3"	""	"554"	"35"	"34.000"	"27.000"	"0.00978317380323721"	"25"	"0.0006415"	"0.007224"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTETLK"	"[K].dLTETLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"639.39111"	"1277.77495"	"1277.77169"	"2.55"	"0.00163"	"12/56"	"12"	"56"	"1104110.18682861"	"HCD"	"MS2"	"53.58488"	"100.9"	"100.000"	"68.6083"	"22874"	"22874"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.9"	""	"123.2"	""	"135.6"	""	"172.3"	""	"160.1"	"233.2"	""	"556"	"34"	"34.000"	"27.000"	"0.0101168380043363"	"23"	"0.0001991"	"0.005757"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNFVEFR"	"[K].hTNFVEFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"426.89706"	"1278.67664"	"1278.67924"	"-2.03"	"-0.00087"	"7/74"	"7"	"74"	"4242639.86560059"	"HCD"	"MS2"	"50.75636"	"94.7"	"100.000"	"42.8651"	"12423"	"12423"	"12394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.4"	""	"120.8"	""	"125.8"	""	"148.2"	"0.9"	"189.7"	"185.8"	""	"842"	"41"	"36.000"	"29.000"	"0.00307809554146519"	"17"	"0.0001991"	"0.002908"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNFVEFR"	"[K].hTNFVEFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"P62744"	"AP-2 complex subunit sigma OS=Rattus norvegicus OX=10116 GN=Ap2s1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"426.89771"	"1278.67856"	"1278.67924"	"-0.53"	"-0.00022"	"6/74"	"6"	"74"	"3117649.79095459"	"HCD"	"MS2"	"78.01701"	"86.9"	"100.000"	"42.6764"	"12380"	"12380"	"12351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.9"	""	"125.0"	""	"118.8"	""	"129.0"	""	"159.2"	"170.9"	""	"870"	"31"	"36.000"	"29.000"	"0.0372811462675211"	"14"	"0.0001991"	"0.003652"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITQSNAIMR"	"[K].iTQSNAImR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"P04905"	"Glutathione S-transferase Mu 1 OS=Rattus norvegicus OX=10116 GN=Gstm1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"639.85516"	"1278.70305"	"1278.70374"	"-0.54"	"-0.00034"	"7/80"	"7"	"80"	"1260035.6317749"	"HCD"	"MS2"	"17.90791"	"68.5"	"100.000"	"34.6949"	"9151"	"9151"	"9120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.0"	""	"76.5"	""	"84.0"	""	"127.3"	""	"139.0"	"129.7"	""	"825"	"15"	"36.000"	"29.000"	"1.37855454010772"	"13"	"0.003904"	"0.04249"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMEEAK"	"[R].nVMEEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"639.85852"	"1278.70976"	"1278.71279"	"-2.37"	"-0.00151"	"6/62"	"6"	"62"	"2550646.43084717"	"HCD"	"MS2"	"0"	"224.7"	"100.000"	"43.5917"	"12754"	"12754"	"12730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"361.4"	""	"303.8"	""	"304.1"	""	"283.4"	"1.7"	"429.4"	"446.0"	""	"816"	"30"	"36.000"	"29.000"	"0.0383407110710372"	"26"	"0.002628"	"0.02748"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVMEEAK"	"[R].nVMEEAk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"639.85889"	"1278.71050"	"1278.71279"	"-1.80"	"-0.00115"	"6/62"	"6"	"62"	"2073529.33258057"	"HCD"	"MS2"	"19.11619"	"191.1"	"100.000"	"43.7180"	"12771"	"12771"	"12748"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"291.9"	""	"238.4"	""	"259.3"	""	"256.9"	""	"384.4"	"384.5"	""	"816"	"31"	"36.000"	"29.000"	"0.029084403629162"	"26"	"0.002189"	"0.02094"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"639.86768"	"1278.72807"	"1278.73055"	"-1.94"	"-0.00124"	"6/64"	"6"	"64"	"2995199.984375"	"HCD"	"MS2"	"0"	"235.0"	"100.000"	"39.2279"	"10986"	"10986"	"10971"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.8"	""	"248.6"	""	"243.3"	""	"480.5"	""	"482.3"	"475.4"	""	"810"	"35"	"36.000"	"29.000"	"0.0141727792646485"	"23"	"0.0001991"	"0.00253"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"639.86823"	"1278.72917"	"1278.73055"	"-1.08"	"-0.00069"	"12/64"	"12"	"64"	"5501419.24560547"	"HCD"	"MS2"	"0"	"393.9"	"100.000"	"39.8667"	"11207"	"11207"	"11194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"467.6"	""	"383.1"	""	"416.1"	""	"739.2"	"1.5"	"817.0"	"919.9"	""	"808"	"40"	"36.000"	"29.000"	"0.00415318584443095"	"22"	"0.0001686"	"0.001899"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"639.86847"	"1278.72966"	"1278.73055"	"-0.70"	"-0.00045"	"12/64"	"12"	"64"	"9932731.29724121"	"HCD"	"MS2"	"0"	"700.2"	"100.000"	"39.5709"	"11088"	"11088"	"11079"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"912.3"	""	"677.6"	""	"693.6"	""	"1417.6"	"0.8"	"1403.6"	"1546.1"	""	"770"	"40"	"35.000"	"28.000"	"0.00382349678642059"	"24"	"0.0001991"	"0.002148"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"639.86859"	"1278.72991"	"1278.73055"	"-0.51"	"-0.00032"	"6/64"	"6"	"64"	"2361445.60876465"	"HCD"	"MS2"	"0"	"188.2"	"100.000"	"39.2853"	"10975"	"10975"	"10960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.9"	""	"197.8"	""	"188.7"	""	"381.0"	""	"375.7"	"391.1"	""	"780"	"34"	"35.000"	"28.000"	"0.0144565481495204"	"23"	"0.0001686"	"0.001565"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"639.86871"	"1278.73015"	"1278.73055"	"-0.31"	"-0.00020"	"12/64"	"12"	"64"	"5868355.45709229"	"HCD"	"MS2"	"2.185056"	"440.1"	"100.000"	"39.7803"	"11207"	"11207"	"11195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"537.6"	""	"421.9"	""	"476.5"	""	"839.0"	""	"927.8"	"982.4"	""	"771"	"40"	"35.000"	"28.000"	"0.00396300282927755"	"25"	"0.0001991"	"0.003205"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDELSK"	"[K].aASDELSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"639.86890"	"1278.73052"	"1278.73055"	"-0.03"	"-0.00002"	"12/64"	"12"	"64"	"9227001.64233398"	"HCD"	"MS2"	"0"	"681.9"	"100.000"	"39.4937"	"11093"	"11093"	"11083"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"840.7"	""	"683.8"	""	"695.0"	""	"1350.6"	""	"1411.5"	"1505.4"	""	"771"	"40"	"35.000"	"28.000"	"0.00395388817569918"	"27"	"0.0001991"	"0.003699"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLEPGK"	"[R].nYLEPGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"426.91956"	"1278.74411"	"1278.74581"	"-1.33"	"-0.00056"	"7/60"	"7"	"60"	"1188693.34777832"	"HCD"	"MS2"	"28.59988"	"61.1"	"100.000"	"52.7699"	"16444"	"16444"	"16416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.7"	""	"78.3"	""	"74.3"	""	"108.7"	""	"125.6"	"124.3"	""	"775"	"23"	"35.000"	"28.000"	"0.188917289915062"	"21"	"0.002525"	"0.02521"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLEPGK"	"[R].nYLEPGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"426.91977"	"1278.74475"	"1278.74581"	"-0.82"	"-0.00035"	"7/60"	"7"	"60"	"1038845.33209229"	"HCD"	"MS2"	"26.11639"	"53.2"	"100.000"	"52.5007"	"16368"	"16368"	"16342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.6"	""	"66.8"	""	"72.1"	""	"86.6"	""	"99.7"	"116.8"	""	"768"	"28"	"35.000"	"28.000"	"0.0670395706721474"	"24"	"0.006845"	"0.08522"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLEPGK"	"[R].nYLEPGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"639.87604"	"1278.74480"	"1278.74581"	"-0.79"	"-0.00050"	"6/60"	"6"	"60"	"2479086.32098389"	"HCD"	"MS2"	"0"	"189.5"	"100.000"	"52.8206"	"16465"	"16465"	"16448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"229.3"	""	"263.8"	""	"240.5"	""	"307.8"	""	"361.6"	"400.3"	""	"768"	"20"	"35.000"	"28.000"	"0.427889100899224"	"17"	"0.004234"	"0.04912"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYLEPGK"	"[R].nYLEPGk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"639.87653"	"1278.74578"	"1278.74581"	"-0.03"	"-0.00002"	"6/60"	"6"	"60"	"2642787.05969238"	"HCD"	"MS2"	"0"	"194.9"	"100.000"	"52.4799"	"16359"	"16359"	"16342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.5"	""	"262.7"	""	"260.8"	""	"313.7"	""	"375.6"	"383.5"	""	"769"	"20"	"35.000"	"28.000"	"0.404479340485029"	"21"	"0.004213"	"0.04636"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEALTSAK"	"[K].tEALTSAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"639.88635"	"1278.76543"	"1278.76694"	"-1.18"	"-0.00075"	"7/66"	"7"	"66"	"3398353.18164063"	"HCD"	"MS2"	"36.13667"	"231.0"	"100.000"	"42.9709"	"12500"	"12500"	"12475"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"253.1"	""	"242.1"	""	"265.1"	""	"405.1"	""	"514.0"	"517.6"	""	"623"	"30"	"34.000"	"27.000"	"0.0344713308709043"	"20"	"0.0001686"	"0.001869"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEALTSAK"	"[K].tEALTSAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"639.88666"	"1278.76604"	"1278.76694"	"-0.70"	"-0.00045"	"7/66"	"7"	"66"	"3121180.62164307"	"HCD"	"MS2"	"41.23895"	"213.5"	"100.000"	"43.1067"	"12521"	"12521"	"12498"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.5"	""	"228.6"	""	"247.1"	""	"372.6"	""	"455.1"	"507.6"	""	"604"	"32"	"34.000"	"27.000"	"0.0210381207261452"	"22"	"0.0001991"	"0.002736"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVTEGK"	"[R].tVSVTEGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"639.88702"	"1278.76677"	"1278.76694"	"-0.13"	"-0.00008"	"7/66"	"7"	"66"	"1919345.95593262"	"HCD"	"MS2"	"7.34375"	"152.4"	"100.000"	"42.0349"	"12084"	"12084"	"12060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.6"	""	"181.6"	""	"187.0"	""	"245.8"	""	"315.1"	"338.1"	""	"588"	"46"	"34.000"	"27.000"	"0.000703634832383183"	"24"	"9.9E-05"	"0.0009159"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVTEGK"	"[R].tVSVTEGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"639.88776"	"1278.76824"	"1278.76694"	"1.02"	"0.00065"	"7/66"	"7"	"66"	"1943515.9498291"	"HCD"	"MS2"	"0"	"154.6"	"100.000"	"41.9242"	"12073"	"12073"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.4"	""	"181.5"	""	"185.3"	""	"250.8"	""	"335.9"	"333.8"	""	"586"	"46"	"34.000"	"27.000"	"0.000744505002725946"	"24"	"9.9E-05"	"0.0009121"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNEESTK"	"[K].gGNEESTk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"640.34766"	"1279.68804"	"1279.68942"	"-1.08"	"-0.00069"	"7/72"	"7"	"72"	"575076.038330078"	"HCD"	"MS2"	"0"	"53.3"	"100.000"	"20.9895"	"3671"	"3671"	"3651"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"45.0"	""	"44.0"	""	"131.4"	""	"108.4"	"108.3"	""	"798"	"48"	"36.000"	"29.000"	"0.000638223653417253"	""	"9.9E-05"	"0.0007059"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSADGNEK"	"[K].tSADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"640.34766"	"1279.68804"	"1279.68942"	"-1.08"	"-0.00069"	"7/72"	"7"	"72"	"457626.645751953"	"HCD"	"MS2"	"11.64919"	"44.6"	"100.000"	"22.1842"	"4174"	"4174"	"4163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.7"	""	"46.3"	""	"48.2"	""	"78.8"	""	"91.5"	"94.9"	""	"798"	"25"	"36.000"	"29.000"	"0.137712351995007"	"21"	"0.0001686"	"0.001313"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSADGNEK"	"[K].tSADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"640.34790"	"1279.68852"	"1279.68942"	"-0.70"	"-0.00045"	"6/72"	"6"	"72"	"374437.819274902"	"HCD"	"MS2"	"15.28269"	"34.1"	"100.000"	"22.3179"	"4185"	"4185"	"4177"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"35.7"	""	"41.2"	""	"70.8"	"0.1"	"67.1"	"65.2"	""	"780"	"27"	"35.000"	"28.000"	"0.0712959084295669"	"22"	"0.0001991"	"0.003856"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNEESTK"	"[K].gGNEESTk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"2"	"2"	"0.1750"	"0.0000"	"1"	"1"	"1"	"640.34821"	"1279.68913"	"1279.68942"	"-0.22"	"-0.00014"	"12/72"	"12"	"72"	"668255.693237305"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"20.9591"	"3696"	"3696"	"3679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.3"	""	"46.2"	""	"64.7"	""	"132.8"	""	"115.0"	"122.8"	""	"800"	"40"	"36.000"	"29.000"	"0.00422727003685464"	""	"0"	"0.0002539"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLEMEK"	"[K].dGLEMEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"640.35144"	"1279.69560"	"1279.69681"	"-0.94"	"-0.00060"	"10/58"	"10"	"58"	"2093524.11755371"	"HCD"	"MS2"	"22.21083"	"174.7"	"100.000"	"54.8473"	"17325"	"17325"	"17306"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"318.4"	""	"215.2"	""	"222.1"	""	"196.2"	"1.5"	"343.9"	"358.7"	""	"824"	"23"	"36.000"	"29.000"	"0.216220673622906"	"26"	"0.00307"	"0.03328"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLEMEK"	"[K].dGLEMEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"P63029"	"Translationally-controlled tumor protein OS=Rattus norvegicus OX=10116 GN=Tpt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"640.35162"	"1279.69597"	"1279.69681"	"-0.66"	"-0.00042"	"5/58"	"5"	"58"	"1258978.19891357"	"HCD"	"MS2"	"20.78437"	"108.2"	"100.000"	"55.4450"	"17535"	"17535"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.4"	""	"123.4"	""	"137.6"	""	"136.7"	"1.6"	"226.8"	"233.9"	""	"824"	"18"	"36.000"	"29.000"	"0.682177224949446"	"24"	"0.00307"	"0.03332"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGSQWTK"	"[K].nGSQWTk.[A]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"640.35486"	"1279.70244"	"1279.70467"	"-1.74"	"-0.00112"	"10/66"	"10"	"66"	"829801.686828613"	"HCD"	"MS2"	"42.97988"	"79.7"	"100.000"	"48.8027"	"14833"	"14833"	"14803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.9"	""	"106.0"	""	"104.0"	""	"107.4"	"1.9"	"157.4"	"160.7"	""	"804"	"10"	"36.000"	"29.000"	"4.11363782896863"	"21"	"0.008111"	"0.1024"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"640.36230"	"1279.71733"	"1279.72077"	"-2.68"	"-0.00172"	"7/84"	"7"	"84"	"389454.097229004"	"HCD"	"MS2"	"31.23143"	"29.5"	"100.000"	"85.5614"	"29742"	"29742"	"29719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.3"	""	"36.3"	""	"40.5"	""	"46.9"	"0.0"	"58.6"	"54.1"	""	"792"	"25"	"35.000"	"28.000"	"0.126676246343779"	"15"	"0.0001991"	"0.002089"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLPSQVSR"	"[R].tYLPSQVSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.36322"	"1279.71916"	"1279.72077"	"-1.25"	"-0.00080"	"8/84"	"8"	"84"	"2711991.68786621"	"HCD"	"MS2"	"10.15373"	"138.7"	"100.000"	"49.7017"	"15232"	"15232"	"15214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.7"	""	"187.1"	""	"205.0"	""	"206.2"	""	"242.1"	"257.8"	""	"791"	"30"	"35.000"	"28.000"	"0.0373376076571083"	"24"	"0.0001686"	"0.001123"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"640.36334"	"1279.71941"	"1279.72077"	"-1.06"	"-0.00068"	"6/84"	"6"	"84"	"303849.017700195"	"HCD"	"MS2"	"25.13868"	"23.5"	"100.000"	"85.4708"	"29735"	"29735"	"29713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.0"	""	"33.4"	""	"30.5"	""	"44.6"	""	"43.2"	"38.5"	""	"791"	"19"	"35.000"	"28.000"	"0.55353678607747"	"19"	"0.0001991"	"0.004288"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"640.36365"	"1279.72002"	"1279.72077"	"-0.59"	"-0.00037"	"9/84"	"9"	"84"	"547352.510986328"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"83.3671"	"28884"	"28884"	"28864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.3"	""	"42.6"	""	"46.1"	""	"52.8"	""	"57.1"	"62.3"	""	"776"	"49"	"35.000"	"28.000"	"0.000459020123621363"	"20"	"0"	"0.0001574"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLPSQVSR"	"[R].tYLPSQVSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"640.36377"	"1279.72026"	"1279.72077"	"-0.39"	"-0.00025"	"7/84"	"7"	"84"	"1390515.42126465"	"HCD"	"MS2"	"11.57849"	"88.3"	"100.000"	"50.0126"	"15359"	"15359"	"15339"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.4"	""	"104.6"	""	"122.2"	""	"134.1"	"0.1"	"152.1"	"191.6"	""	"776"	"30"	"35.000"	"28.000"	"0.0428382504522004"	"23"	"0.003317"	"0.03634"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLPSQVSR"	"[R].tYLPSQVSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.36377"	"1279.72026"	"1279.72077"	"-0.39"	"-0.00025"	"8/84"	"8"	"84"	"1797788.59014893"	"HCD"	"MS2"	"16.83807"	"99.3"	"100.000"	"49.9881"	"15314"	"15314"	"15292"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.9"	""	"142.0"	""	"145.7"	""	"149.7"	""	"154.2"	"187.2"	""	"776"	"30"	"35.000"	"28.000"	"0.0384442794618394"	"24"	"9.9E-05"	"0.000691"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYLPSQVSR"	"[R].tYLPSQVSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"640.36389"	"1279.72051"	"1279.72077"	"-0.20"	"-0.00013"	"7/84"	"7"	"84"	"2166940.12188721"	"HCD"	"MS2"	"5.552351"	"118.4"	"100.000"	"50.2779"	"15432"	"15432"	"15414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.1"	""	"152.9"	""	"163.8"	""	"177.7"	""	"225.0"	"228.1"	""	"818"	"29"	"36.000"	"29.000"	"0.053299521238699"	"29"	"9.9E-05"	"0.0006311"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"640.36407"	"1279.72087"	"1279.72077"	"0.08"	"0.00005"	"8/84"	"8"	"84"	"818066.90246582"	"HCD"	"MS2"	"0"	"43.7"	"100.000"	"83.2594"	"28812"	"28812"	"28791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"63.4"	""	"68.0"	""	"61.7"	""	"79.9"	"81.6"	""	"803"	"46"	"36.000"	"29.000"	"0.00107321207307832"	"21"	"0"	"9.684E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.36420"	"1279.72112"	"1279.72077"	"0.27"	"0.00017"	"8/84"	"8"	"84"	"1412389.01306152"	"HCD"	"MS2"	"20.75935"	"59.9"	"100.000"	"83.0398"	"28751"	"28751"	"28732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.6"	""	"78.8"	""	"84.7"	""	"103.0"	"0.0"	"109.7"	"109.2"	""	"803"	"21"	"36.000"	"29.000"	"0.318922786241799"	"14"	"0"	"0.0003522"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"640.36426"	"1279.72124"	"1279.72077"	"0.37"	"0.00024"	"9/84"	"9"	"84"	"2402159.7756958"	"HCD"	"MS2"	"41.31627"	"97.3"	"100.000"	"78.5868"	"26919"	"26919"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.3"	""	"137.6"	""	"138.4"	""	"160.2"	"1.7"	"165.4"	"169.3"	""	"785"	"54"	"35.000"	"28.000"	"0.000147516181183214"	"19"	"0"	"9.766E-06"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSVLNGGFR"	"[R].tVSVLnGGFR.[N]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"640.36438"	"1279.72148"	"1279.72077"	"0.56"	"0.00036"	"7/84"	"7"	"84"	"2656251.23413086"	"HCD"	"MS2"	"46.26083"	"108.3"	"100.000"	"78.6883"	"26987"	"26987"	"26967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.5"	""	"156.6"	""	"156.1"	""	"192.8"	"2.3"	"178.9"	"166.9"	""	"785"	"43"	"35.000"	"28.000"	"0.00194912486169257"	"21"	"0"	"2.785E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPDLAK"	"[R].dYPDLAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.36877"	"1279.73027"	"1279.72982"	"0.35"	"0.00022"	"10/54"	"10"	"54"	"1261815.89904785"	"HCD"	"MS2"	"26.15764"	"106.9"	"100.000"	"63.7202"	"20892"	"20892"	"20866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.5"	""	"136.3"	""	"143.2"	""	"179.8"	""	"209.0"	"191.3"	""	"769"	"12"	"35.000"	"28.000"	"2.40933030966513"	"18"	"0.004713"	"0.05568"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"427.24866"	"1279.73142"	"1279.73319"	"-1.39"	"-0.00059"	"5/54"	"5"	"54"	"1255750.9317627"	"HCD"	"MS2"	"47.87813"	"67.8"	"100.000"	"66.2035"	"21934"	"21934"	"21910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.1"	""	"103.6"	""	"87.7"	""	"110.5"	""	"116.2"	"121.8"	""	"767"	"25"	"35.000"	"28.000"	"0.114753348813924"	"23"	"0.002834"	"0.03063"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"640.36951"	"1279.73174"	"1279.73319"	"-1.14"	"-0.00073"	"12/54"	"12"	"54"	"1814267.51281738"	"HCD"	"MS2"	"5.600488"	"152.7"	"100.000"	"66.7834"	"22165"	"22165"	"22152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"226.8"	""	"198.2"	""	"216.5"	""	"217.0"	""	"275.7"	"316.1"	""	"828"	"32"	"36.000"	"29.000"	"0.0255858789657304"	"25"	"0.002035"	"0.01846"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"640.36957"	"1279.73186"	"1279.73319"	"-1.04"	"-0.00067"	"6/54"	"6"	"54"	"688490.411804199"	"HCD"	"MS2"	"27.53358"	"57.9"	"100.000"	"67.0628"	"22246"	"22246"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.8"	""	"84.4"	""	"85.1"	""	"77.5"	"1.4"	"108.8"	"111.8"	""	"828"	"16"	"36.000"	"29.000"	"1.05438772457021"	"19"	"0.00212"	"0.01963"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.36957"	"1279.73186"	"1279.73319"	"-1.04"	"-0.00067"	"12/54"	"12"	"54"	"20627835.0037842"	"HCD"	"MS2"	"0"	"700.4"	"45.719"	"66.4580"	"22036"	"22036"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"943.7"	""	"914.8"	""	"1043.4"	""	"1015.1"	""	"1262.8"	"1465.0"	""	"828"	"36"	"36.000"	"29.000"	"0.0110662465318661"	"27"	"0.004593"	"0.0541"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.36963"	"1279.73198"	"1279.73319"	"-0.95"	"-0.00061"	"12/54"	"12"	"54"	"12802760.5231934"	"HCD"	"MS2"	"0"	"949.1"	"100.000"	"66.1609"	"21883"	"21883"	"21865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1382.5"	""	"1368.7"	""	"1363.1"	""	"1426.5"	""	"1638.2"	"1814.5"	""	"799"	"36"	"36.000"	"29.000"	"0.0112335438174438"	"27"	"0.003818"	"0.04139"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"640.36969"	"1279.73210"	"1279.73319"	"-0.85"	"-0.00055"	"12/54"	"12"	"54"	"2442995.58898926"	"HCD"	"MS2"	"3.319007"	"197.9"	"100.000"	"66.7271"	"22109"	"22109"	"22095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"293.7"	""	"250.1"	""	"281.1"	""	"275.5"	""	"368.8"	"412.0"	""	"799"	"35"	"36.000"	"29.000"	"0.0117359103595863"	"27"	"0.001718"	"0.01518"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPDLAK"	"[R].dYPDLAk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"640.36981"	"1279.73235"	"1279.72982"	"1.97"	"0.00126"	"9/54"	"9"	"54"	"1267366.76293945"	"HCD"	"MS2"	"35.84762"	"111.9"	"100.000"	"63.7052"	"20918"	"20918"	"20889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.5"	""	"140.5"	""	"150.8"	""	"172.0"	""	"213.6"	"208.4"	""	"799"	"21"	"36.000"	"29.000"	"0.347949954187454"	"20"	"0.004213"	"0.04576"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"640.36981"	"1279.73235"	"1279.73320"	"-0.66"	"-0.00042"	"10/50"	"10"	"50"	"2532351.48522949"	"HCD"	"MS2"	"16.18113"	"145.5"	"100.000"	"59.7806"	"19292"	"19292"	"19274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.5"	""	"150.1"	""	"193.2"	""	"391.2"	""	"252.4"	"210.1"	""	"799"	"24"	"36.000"	"29.000"	"0.156500879904559"	"25"	"0.0042"	"0.0454"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"640.36981"	"1279.73235"	"1279.73319"	"-0.66"	"-0.00042"	"12/54"	"12"	"54"	"19550709.973999"	"HCD"	"MS2"	"0.3438599"	"934.7"	"63.432"	"66.4339"	"21993"	"21993"	"21984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1300.8"	""	"1242.1"	""	"1375.3"	""	"1327.9"	""	"1684.5"	"1930.7"	""	"799"	"38"	"36.000"	"29.000"	"0.0068315111837857"	"28"	"0.00394"	"0.04354"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"427.24899"	"1279.73243"	"1279.73319"	"-0.60"	"-0.00026"	"5/54"	"5"	"54"	"1176886.73693848"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"66.1725"	"21888"	"21888"	"21865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.3"	""	"81.3"	""	"91.7"	""	"95.3"	""	"98.3"	"134.2"	""	"792"	"27"	"35.000"	"28.000"	"0.0864361045089829"	"23"	"0.002628"	"0.02782"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"427.24902"	"1279.73252"	"1279.73319"	"-0.53"	"-0.00023"	"5/54"	"5"	"54"	"1537817.237854"	"HCD"	"MS2"	"51.37817"	"82.4"	"100.000"	"66.4498"	"21999"	"21999"	"21984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.9"	""	"110.9"	""	"125.0"	""	"119.8"	""	"151.1"	"169.8"	""	"789"	"27"	"35.000"	"28.000"	"0.0861086950222064"	"25"	"0.00307"	"0.03294"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"640.37000"	"1279.73271"	"1279.73320"	"-0.38"	"-0.00024"	"5/50"	"5"	"50"	"2384238.55883789"	"HCD"	"MS2"	"20.78764"	"147.9"	"100.000"	"59.5782"	"19244"	"19244"	"19227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.1"	""	"154.3"	""	"197.9"	""	"395.2"	""	"269.3"	"213.6"	""	"789"	"18"	"35.000"	"28.000"	"0.608200828688601"	"24"	"0.005832"	"0.07156"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"640.37000"	"1279.73271"	"1279.73320"	"-0.38"	"-0.00024"	"10/50"	"10"	"50"	"2376093.79077148"	"HCD"	"MS2"	"17.24355"	"136.4"	"100.000"	"59.8566"	"19356"	"19356"	"19342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.6"	""	"142.6"	""	"179.8"	""	"352.6"	""	"245.0"	"216.6"	""	"789"	"23"	"35.000"	"28.000"	"0.202790220549267"	"24"	"0.002559"	"0.02561"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"640.37000"	"1279.73271"	"1279.73320"	"-0.38"	"-0.00024"	"8/50"	"8"	"50"	"1979663.57061768"	"HCD"	"MS2"	"46.65643"	"118.2"	"100.000"	"59.4630"	"19163"	"19163"	"19144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.1"	""	"145.6"	""	"144.2"	""	"278.7"	""	"216.4"	"184.0"	""	"789"	"13"	"35.000"	"28.000"	"1.87952024294736"	"19"	"0.008833"	"0.1123"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"427.24918"	"1279.73297"	"1279.73319"	"-0.17"	"-0.00007"	"5/54"	"5"	"54"	"1391691.14562988"	"HCD"	"MS2"	"0"	"75.2"	"100.000"	"66.4993"	"22052"	"22052"	"22035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.7"	"2.6"	"89.5"	""	"106.9"	""	"107.8"	"0.4"	"142.6"	"163.1"	""	"789"	"22"	"35.000"	"28.000"	"0.258849307556496"	"22"	"0.002834"	"0.03059"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAMLLK"	"[K].dDAmLLk.[G]"	"N-Term(TMT6plex); M4(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"3"	"640.37018"	"1279.73308"	"1279.73320"	"-0.09"	"-0.00006"	"6/50"	"6"	"50"	"547638.19921875"	"HCD"	"MS2"	"22.3698"	"44.9"	"100.000"	"67.4599"	"22439"	"22439"	"22416"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.3"	""	"68.1"	""	"62.8"	""	"67.4"	""	"76.2"	"84.2"	""	"789"	"5"	"35.000"	"28.000"	"12.4464932392129"	"16"	"0.008926"	"0.1155"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDMLk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"640.37030"	"1279.73332"	"1279.73319"	"0.10"	"0.00006"	"12/54"	"12"	"54"	"14176780.3733521"	"HCD"	"MS2"	"0"	"985.6"	"100.000"	"66.1897"	"21928"	"21928"	"21910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1470.2"	""	"1402.2"	""	"1433.6"	""	"1471.0"	""	"1700.5"	"1857.2"	""	"789"	"36"	"35.000"	"28.000"	"0.010840442433989"	"27"	"0.00394"	"0.04284"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHHSPPLPILR"	"[K].IHHSPPLPILR.[N]"	""	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.25845"	"1279.76081"	"1279.76335"	"-1.99"	"-0.00085"	"10/80"	"10"	"80"	"2463911.30096436"	"HCD"	"MS2"	"19.09743"	"64.4"	"100.000"	"34.7179"	"9160"	"9160"	"9136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"59.5"	""	"63.3"	""	"119.9"	""	"164.2"	"153.6"	"NoQuanLabels"	"509"	"12"	"34.000"	"27.000"	"1.46787064933328"	"13"	"0.0007053"	"0.007233"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHHSPPLPILR"	"[K].IHHSPPLPILR.[N]"	""	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.25906"	"1279.76264"	"1279.76335"	"-0.56"	"-0.00024"	"7/80"	"7"	"80"	"3200117.05529785"	"HCD"	"MS2"	"25.83025"	"88.7"	"100.000"	"34.8121"	"9162"	"9162"	"9131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.6"	""	"78.8"	""	"91.9"	""	"164.1"	""	"214.3"	"220.5"	"NoQuanLabels"	"487"	"22"	"33.000"	"26.000"	"0.140766387543292"	"14"	"0.0001686"	"0.001936"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNTTFNSR"	"[R].dPNTTFNSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"640.82452"	"1280.64177"	"1280.64324"	"-1.15"	"-0.00074"	"12/90"	"12"	"90"	"908380.679504395"	"HCD"	"MS2"	"51.20368"	"63.4"	"100.000"	"32.7615"	"8328"	"8328"	"8298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.4"	""	"84.2"	""	"96.4"	""	"97.5"	""	"113.0"	"125.4"	""	"598"	"10"	"34.000"	"27.000"	"3.34711927156678"	"16"	"0.0001991"	"0.002521"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNTTFNSR"	"[R].dPNTTFNSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"640.82574"	"1280.64421"	"1280.64324"	"0.76"	"0.00048"	"8/90"	"8"	"90"	"966757.932312012"	"HCD"	"MS2"	"52.89308"	"71.4"	"100.000"	"32.5938"	"8297"	"8297"	"8269"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.4"	""	"93.4"	""	"96.4"	""	"108.8"	""	"130.8"	"141.9"	""	"614"	"19"	"34.000"	"27.000"	"0.396404316999355"	"17"	"0.001872"	"0.01554"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLEQLDMR"	"[K].mLEQLDmR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"640.82947"	"1280.65166"	"1280.65401"	"-1.84"	"-0.00118"	"6/70"	"6"	"70"	"686496.762756348"	"HCD"	"MS2"	"29.96639"	"48.0"	"100.000"	"65.4806"	"21639"	"21639"	"21616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.0"	""	"66.7"	""	"59.5"	""	"74.7"	""	"96.5"	"91.6"	""	"655"	"15"	"35.000"	"28.000"	"1.09701181324189"	"22"	"0.009239"	"0.1182"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTTMGDR"	"[R].eLLTTmGDR.[F]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.83911"	"1280.67095"	"1280.67177"	"-0.64"	"-0.00041"	"7/78"	"7"	"78"	"1588903.71948242"	"HCD"	"MS2"	"24.94651"	"110.1"	"100.000"	"43.6056"	"12725"	"12725"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.6"	""	"107.8"	""	"116.0"	""	"273.0"	""	"225.1"	"215.6"	""	"685"	"15"	"35.000"	"28.000"	"0.990057859710175"	"13"	"0.009046"	"0.1166"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAAYTDLR"	"[R].lEAAYTDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"640.85583"	"1280.70439"	"1280.70478"	"-0.30"	"-0.00019"	"7/74"	"7"	"74"	"951553.66784668"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"77.0699"	"26337"	"26337"	"26325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.5"	""	"72.6"	""	"77.8"	""	"87.5"	"0.6"	"106.9"	"104.6"	""	"732"	"36"	"35.000"	"28.000"	"0.00882025386899293"	"21"	"0.0001991"	"0.002"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGVDSDK"	"[K].tTGVDSDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"640.85901"	"1280.71074"	"1280.70982"	"0.72"	"0.00046"	"12/68"	"12"	"68"	"903970.004089355"	"HCD"	"MS2"	"0"	"84.2"	"100.000"	"29.4487"	"7000"	"7000"	"6976"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.5"	""	"62.4"	""	"84.7"	""	"160.1"	""	"199.6"	"201.3"	""	"711"	"36"	"35.000"	"28.000"	"0.00829544341140896"	"25"	"9.9E-05"	"0.0005143"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGVDSDK"	"[K].tTGVDSDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"P19814"	"Trans-Golgi network integral membrane protein TGN38 OS=Rattus norvegicus OX=10116 GN=Ttgn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"640.85925"	"1280.71123"	"1280.70982"	"1.10"	"0.00071"	"7/68"	"7"	"68"	"792969.319458008"	"HCD"	"MS2"	"0"	"75.2"	"100.000"	"29.2045"	"6941"	"6941"	"6917"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.6"	""	"67.2"	""	"83.5"	""	"137.5"	""	"170.0"	"178.0"	""	"707"	"34"	"35.000"	"28.000"	"0.0126587090515782"	"24"	"0.0001991"	"0.003008"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDHVLK"	"[R].nPDHVLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"427.59537"	"1280.77155"	"1280.77269"	"-0.89"	"-0.00038"	"9/60"	"9"	"60"	"4689885.2644043"	"HCD"	"MS2"	"16.7663"	"230.7"	"100.000"	"33.5682"	"8656"	"8656"	"8636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.2"	""	"285.2"	""	"303.6"	""	"413.0"	""	"440.6"	"478.5"	""	"361"	"22"	"32.000"	"25.000"	"0.120358621843059"	"16"	"0.004713"	"0.05563"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDHVLK"	"[R].nPDHVLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"427.59579"	"1280.77283"	"1280.77269"	"0.11"	"0.00005"	"5/60"	"5"	"60"	"4584185.16851807"	"HCD"	"MS2"	"11.82667"	"221.6"	"100.000"	"33.4344"	"8639"	"8639"	"8623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.1"	""	"280.3"	""	"281.0"	""	"392.2"	""	"418.0"	"466.9"	""	"391"	"30"	"32.000"	"25.000"	"0.0214855641609058"	"23"	"0.002166"	"0.01994"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANGNSFATR"	"[K].dANGNSFATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"641.32202"	"1281.63677"	"1281.63849"	"-1.35"	"-0.00086"	"7/102"	"7"	"102"	"244024.112060547"	"HCD"	"MS2"	"100"	"21.1"	"100.000"	"28.0344"	"6428"	"6428"	"6414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"23.6"	""	"37.8"	""	"39.1"	""	"36.5"	"35.0"	""	"553"	"24"	"34.000"	"27.000"	"0.115264384529548"	"23"	"0.0001991"	"0.003892"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANGNSFATR"	"[K].dANGNSFATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"641.32227"	"1281.63725"	"1281.63849"	"-0.97"	"-0.00062"	"8/102"	"8"	"102"	"371228.926208496"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"27.7650"	"6361"	"6361"	"6334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"37.0"	""	"36.1"	""	"41.1"	""	"37.1"	"49.1"	""	"558"	"30"	"34.000"	"27.000"	"0.0257397428176179"	"20"	"0.0001686"	"0.001079"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFETVGQDR"	"[K].tFETVGQDR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"641.33527"	"1281.66326"	"1281.66365"	"-0.30"	"-0.00020"	"8/82"	"8"	"82"	"909807.74621582"	"HCD"	"MS2"	"31.77687"	"69.6"	"100.000"	"40.6939"	"11543"	"11543"	"11518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.4"	""	"94.9"	""	"104.8"	""	"91.3"	""	"128.1"	"126.2"	""	"626"	"36"	"34.000"	"27.000"	"0.00766556794697405"	"18"	"0"	"0.0001713"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFETVGQDR"	"[K].tFETVGQDR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"Q499N5"	"Acyl-CoA synthetase family member 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acsf2 PE=2 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"641.33533"	"1281.66338"	"1281.66365"	"-0.21"	"-0.00013"	"8/82"	"8"	"82"	"1161241.09259033"	"HCD"	"MS2"	"33.63911"	"82.1"	"100.000"	"40.6121"	"11545"	"11545"	"11521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.5"	""	"112.7"	""	"127.9"	""	"109.4"	""	"153.8"	"152.7"	""	"626"	"37"	"34.000"	"27.000"	"0.00655457198681329"	"18"	"0"	"0.0002043"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGYQGLR"	"[R].mVEGYQGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.0556"	"0.0000"	"1"	"1"	"1"	"641.34375"	"1281.68022"	"1281.68227"	"-1.60"	"-0.00102"	"7/70"	"7"	"70"	"818775.788024902"	"HCD"	"MS2"	"54.11336"	"58.4"	"100.000"	"58.2432"	"18666"	"18666"	"18642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.8"	""	"86.7"	""	"96.1"	""	"66.1"	""	"103.6"	"115.2"	""	"622"	"18"	"34.000"	"27.000"	"0.482792360096963"	""	"0.001348"	"0.01058"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGYQGLR"	"[R].mVEGYQGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"641.34381"	"1281.68035"	"1281.68227"	"-1.50"	"-0.00096"	"7/70"	"7"	"70"	"856217.350708008"	"HCD"	"MS2"	"41.39709"	"58.7"	"100.000"	"57.9944"	"18600"	"18600"	"18574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.5"	""	"94.0"	""	"92.6"	""	"59.1"	"0.6"	"98.0"	"117.9"	""	"626"	"19"	"34.000"	"27.000"	"0.424174286065874"	""	"0.0005161"	"0.006994"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGYQGLR"	"[R].mVEGYQGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"641.34399"	"1281.68071"	"1281.68227"	"-1.22"	"-0.00078"	"8/70"	"8"	"70"	"1008262.47540283"	"HCD"	"MS2"	"25.44373"	"63.1"	"100.000"	"58.5423"	"18788"	"18788"	"18766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.1"	""	"102.1"	""	"105.4"	""	"55.4"	""	"105.3"	"126.4"	""	"633"	"34"	"35.000"	"28.000"	"0.0117590900009255"	"27"	"9.9E-05"	"0.0009555"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGYQGLR"	"[R].mVEGYQGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"641.34442"	"1281.68157"	"1281.68227"	"-0.55"	"-0.00035"	"6/70"	"6"	"70"	"428907.567260742"	"HCD"	"MS2"	"44.99635"	"35.9"	"100.000"	"58.9176"	"18941"	"18941"	"18917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.2"	""	"47.5"	""	"57.7"	""	"40.4"	"0.4"	"68.1"	"72.8"	""	"611"	"13"	"34.000"	"27.000"	"1.51360033290863"	"22"	"0.0007633"	"0.007529"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEGYQGLR"	"[R].mVEGYQGLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"641.34460"	"1281.68193"	"1281.68227"	"-0.27"	"-0.00017"	"8/70"	"8"	"70"	"1027870.78167725"	"HCD"	"MS2"	"29.31892"	"63.3"	"100.000"	"58.2981"	"18724"	"18724"	"18699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.2"	""	"103.0"	""	"102.3"	""	"55.5"	"1.2"	"106.5"	"132.8"	""	"630"	"40"	"34.000"	"27.000"	"0.0034065169465885"	""	"0"	"0.0002282"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEDEVK"	"[K].gFEDEVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"641.35632"	"1281.70537"	"1281.70909"	"-2.90"	"-0.00186"	"6/52"	"6"	"52"	"929785.750427246"	"HCD"	"MS2"	"26.83518"	"83.7"	"100.000"	"54.3393"	"17118"	"17118"	"17095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.7"	""	"101.2"	""	"110.1"	""	"136.2"	"0.2"	"163.2"	"165.6"	""	"649"	"17"	"35.000"	"28.000"	"0.602857545677256"	"23"	"0.002922"	"0.03125"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"641.35779"	"1281.70830"	"1281.70909"	"-0.62"	"-0.00039"	"12/54"	"12"	"54"	"1351569.19232178"	"HCD"	"MS2"	"0"	"133.0"	"100.000"	"45.9392"	"13675"	"13675"	"13653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.6"	""	"150.2"	""	"170.2"	""	"211.7"	""	"258.5"	"263.7"	""	"650"	"35"	"35.000"	"28.000"	"0.0102537650259675"	""	"0.001348"	"0.01128"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"641.35803"	"1281.70879"	"1281.70909"	"-0.23"	"-0.00015"	"12/54"	"12"	"54"	"5023125.19854736"	"HCD"	"MS2"	"0"	"405.1"	"100.000"	"45.6239"	"13546"	"13546"	"13525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"598.6"	""	"468.2"	""	"483.4"	""	"673.9"	""	"808.4"	"814.3"	""	"647"	"34"	"35.000"	"28.000"	"0.0115577763142149"	""	"0.002525"	"0.02493"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"641.35822"	"1281.70915"	"1281.70909"	"0.05"	"0.00003"	"12/54"	"12"	"54"	"2369550.13452148"	"HCD"	"MS2"	"0"	"203.1"	"100.000"	"45.5813"	"13563"	"13563"	"13544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"300.1"	""	"213.1"	""	"235.1"	""	"342.1"	""	"410.2"	"429.9"	""	"650"	"33"	"35.000"	"28.000"	"0.0179012501331756"	""	"0.001872"	"0.01569"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEDEVK"	"[K].gFEDEVk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"641.35870"	"1281.71013"	"1281.70909"	"0.81"	"0.00052"	"10/52"	"10"	"52"	"941773.444763184"	"HCD"	"MS2"	"36.56728"	"76.2"	"100.000"	"54.6866"	"17226"	"17226"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.9"	""	"94.9"	""	"104.8"	""	"116.3"	""	"163.2"	"146.5"	""	"643"	"12"	"35.000"	"28.000"	"2.11924407321049"	"23"	"0.0042"	"0.04519"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEEAEK"	"[K].aFEEAEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"641.35883"	"1281.71037"	"1281.70909"	"1.00"	"0.00064"	"12/54"	"12"	"54"	"2710465.17852783"	"HCD"	"MS2"	"3.976447"	"213.2"	"100.000"	"45.2845"	"13442"	"13442"	"13420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"338.1"	""	"258.3"	""	"249.8"	""	"323.4"	""	"432.4"	"421.9"	""	"643"	"34"	"35.000"	"28.000"	"0.0142620179023955"	""	"0.00212"	"0.01948"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTMTSQK"	"[K].aGTMTSQk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"641.36469"	"1281.72209"	"1281.72369"	"-1.25"	"-0.00080"	"5/64"	"5"	"64"	"266273.870910645"	"HCD"	"MS2"	"100"	"33.6"	"100.000"	"30.0241"	"7232"	"7232"	"7211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.9"	""	"46.5"	""	"40.9"	""	"48.9"	""	"64.6"	"74.5"	""	"646"	"20"	"35.000"	"28.000"	"0.322257120614684"	"18"	"0.004998"	"0.06349"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGTMTSQK"	"[K].aGTMTSQk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"641.36511"	"1281.72295"	"1281.72369"	"-0.58"	"-0.00037"	"11/64"	"11"	"64"	"393641.480407715"	"HCD"	"MS2"	"0"	"43.4"	"100.000"	"29.8372"	"7197"	"7197"	"7174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.3"	""	"48.8"	""	"58.9"	""	"56.2"	""	"90.8"	"93.9"	""	"638"	"29"	"35.000"	"28.000"	"0.0412848473422546"	"18"	"0.002834"	"0.03074"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"427.91495"	"1281.73029"	"1281.73156"	"-0.99"	"-0.00042"	"8/62"	"8"	"62"	"4047779.67077637"	"HCD"	"MS2"	"9.888429"	"204.0"	"100.000"	"19.6048"	"3132"	"3132"	"3126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"297.2"	""	"216.8"	""	"199.2"	""	"363.8"	"3.1"	"457.7"	"400.1"	""	"579"	"28"	"34.000"	"27.000"	"0.0458826579217492"	"15"	"0.0001991"	"0.004718"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"427.91498"	"1281.73038"	"1281.73156"	"-0.92"	"-0.00039"	"8/62"	"8"	"62"	"4811006.82574463"	"HCD"	"MS2"	"0"	"235.5"	"100.000"	"19.5976"	"3168"	"3168"	"3155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.8"	""	"253.7"	""	"220.6"	""	"413.3"	"5.2"	"501.1"	"495.3"	""	"573"	"20"	"34.000"	"27.000"	"0.257113349624465"	"14"	"0.0001686"	"0.001771"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.36890"	"1281.73052"	"1281.73156"	"-0.81"	"-0.00052"	"7/62"	"7"	"62"	"532144.104003906"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"19.6090"	"3173"	"3173"	"3155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.8"	""	"42.7"	""	"49.3"	""	"89.5"	"2.5"	"89.8"	"97.6"	""	"564"	"33"	"34.000"	"27.000"	"0.0158580253703678"	"15"	"0.0001991"	"0.001981"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAAENPGK"	"[K].hAAENPGk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.36945"	"1281.73161"	"1281.73156"	"0.05"	"0.00003"	"7/62"	"7"	"62"	"466935.054443359"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"19.6162"	"3137"	"3137"	"3126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"40.5"	""	"41.2"	""	"68.8"	""	"80.9"	"81.3"	""	"582"	"32"	"34.000"	"27.000"	"0.0171353503708476"	"15"	"0.0001686"	"0.001586"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFEISK"	"[K].eAFEISk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"641.37579"	"1281.74431"	"1281.74547"	"-0.91"	"-0.00058"	"6/58"	"6"	"58"	"1585072.69488525"	"HCD"	"MS2"	"40.03884"	"135.5"	"100.000"	"72.2011"	"24330"	"24330"	"24304"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"214.3"	""	"191.5"	""	"186.3"	""	"225.4"	"0.1"	"231.0"	"234.0"	""	"466"	"32"	"33.000"	"26.000"	"0.0152881847048577"	""	"0.0007633"	"0.007482"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFEISK"	"[K].eAFEISk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"641.37592"	"1281.74455"	"1281.74547"	"-0.72"	"-0.00046"	"12/58"	"12"	"58"	"2083812.10180664"	"HCD"	"MS2"	"4.802046"	"166.9"	"100.000"	"72.8780"	"24634"	"24634"	"24616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.0"	"3.3"	"223.9"	""	"253.4"	""	"246.7"	""	"309.2"	"303.1"	""	"468"	"23"	"33.000"	"26.000"	"0.122522502161066"	"25"	"0.002166"	"0.01987"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFEISK"	"[K].eAFEISk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"641.37598"	"1281.74468"	"1281.74547"	"-0.62"	"-0.00040"	"12/58"	"12"	"58"	"1870547.2779541"	"HCD"	"MS2"	"7.897837"	"157.1"	"100.000"	"72.7939"	"24571"	"24571"	"24554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.1"	""	"199.2"	""	"231.8"	""	"228.0"	""	"281.4"	"304.8"	""	"468"	"23"	"33.000"	"26.000"	"0.12829680979148"	"25"	"0.00212"	"0.01958"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFEISK"	"[K].eAFEISk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"641.37628"	"1281.74529"	"1281.74547"	"-0.15"	"-0.00009"	"12/58"	"12"	"58"	"5368123.71801758"	"HCD"	"MS2"	"1.04958"	"416.2"	"100.000"	"72.5783"	"24512"	"24512"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"676.2"	"3.3"	"566.9"	""	"604.3"	""	"666.2"	""	"708.6"	"716.9"	""	"468"	"23"	"33.000"	"26.000"	"0.114344652086223"	"25"	"0.00329"	"0.03561"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFEISK"	"[K].eAFEISk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"641.37628"	"1281.74529"	"1281.74547"	"-0.15"	"-0.00009"	"12/58"	"12"	"58"	"5295699.63763428"	"HCD"	"MS2"	"1.427155"	"409.0"	"100.000"	"72.4986"	"24450"	"24450"	"24432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"637.2"	""	"578.0"	""	"587.1"	""	"667.1"	""	"697.3"	"709.5"	""	"468"	"23"	"33.000"	"26.000"	"0.113819286131802"	"25"	"0.003786"	"0.04082"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEDYVK"	"[K].iGEDYVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"641.37628"	"1281.74529"	"1281.74547"	"-0.15"	"-0.00009"	"5/50"	"5"	"50"	"2359392.76049805"	"HCD"	"MS2"	"29.02437"	"185.2"	"100.000"	"61.3924"	"19980"	"19980"	"19958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"304.5"	""	"227.0"	""	"233.6"	""	"291.2"	""	"348.4"	"353.1"	""	"468"	"16"	"33.000"	"26.000"	"0.581053146639163"	"17"	"0.00296"	"0.03167"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFEISK"	"[K].eAFEISk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"641.37640"	"1281.74553"	"1281.74547"	"0.04"	"0.00003"	"6/58"	"6"	"58"	"1384881.25689697"	"HCD"	"MS2"	"34.09937"	"116.6"	"100.000"	"72.2859"	"24394"	"24394"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.6"	""	"167.5"	""	"155.0"	""	"202.5"	""	"200.8"	"190.6"	""	"470"	"31"	"33.000"	"26.000"	"0.0204205700882281"	"26"	"0.0009352"	"0.00829"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEDYVK"	"[K].iGEDYVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"641.37659"	"1281.74590"	"1281.74547"	"0.33"	"0.00021"	"5/50"	"5"	"50"	"1980357.99993896"	"HCD"	"MS2"	"12.67155"	"151.3"	"100.000"	"61.4225"	"19961"	"19961"	"19944"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.3"	""	"195.0"	""	"202.5"	""	"228.3"	""	"272.4"	"294.5"	""	"467"	"15"	"33.000"	"26.000"	"0.740094002620655"	"15"	"0.003357"	"0.03795"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTAEEFK"	"[K].vTAEEFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H94"	"Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Rattus norvegicus OX=10116 GN=Fkbp9 PE=2 SV=1"	"Q66H94"	"Peptidyl-prolyl cis-trans isomerase FKBP9 OS=Rattus norvegicus OX=10116 GN=Fkbp9 PE=2 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"641.37695"	"1281.74663"	"1281.74547"	"0.90"	"0.00058"	"6/54"	"6"	"54"	"909085.108032227"	"HCD"	"MS2"	"8.364872"	"87.4"	"100.000"	"61.8724"	"20173"	"20173"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.9"	""	"117.7"	""	"131.6"	""	"139.4"	""	"180.6"	"156.1"	""	"459"	"29"	"33.000"	"26.000"	"0.0275285090072783"	"25"	"0.001406"	"0.01154"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWLGNDDR"	"[-].mFSWLGNDDR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.77930"	"1282.55132"	"1282.55210"	"-0.61"	"-0.00039"	"5/90"	"5"	"90"	"118466.543518066"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"115.6960"	"41740"	"41740"	"41737"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.0"	""	"6.1"	""	"3.7"	""	"9.1"	""	"5.3"	"9.8"	"NoQuanLabels"	"99"	"19"	"26.000"	"19.000"	"0.061038689244831"	"14"	"0.00307"	"0.03414"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSWLGNDDR"	"[-].mFSWLGNDDR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.77960"	"1282.55193"	"1282.55210"	"-0.13"	"-0.00009"	"4/90"	"4"	"90"	"85497.7252197266"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"115.7741"	"41767"	"41767"	"41764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.4"	""	"3.7"	""	"7.7"	""	"8.5"	""	"4.5"	"5.3"	"NoQuanLabels"	"100"	"11"	"26.000"	"20.000"	"0.381917891788845"	"13"	"0.00394"	"0.04291"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLGDMEGR"	"[R].yLLGDMEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"641.83612"	"1282.66496"	"1282.66629"	"-1.03"	"-0.00066"	"6/68"	"6"	"68"	"549859.806762695"	"HCD"	"MS2"	"14.65627"	"35.1"	"100.000"	"84.9696"	"29501"	"29501"	"29487"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.8"	""	"48.0"	""	"50.5"	""	"45.2"	""	"56.6"	"65.6"	""	"581"	"30"	"34.000"	"27.000"	"0.0281284717243893"	"22"	"0.0001686"	"0.001691"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLGDMEGR"	"[R].yLLGDMEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"641.83679"	"1282.66631"	"1282.66629"	"0.01"	"0.00001"	"10/68"	"10"	"68"	"530451.942321777"	"HCD"	"MS2"	"20.71451"	"35.0"	"100.000"	"84.9824"	"29536"	"29536"	"29515"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.0"	""	"52.4"	""	"57.5"	""	"35.0"	"0.4"	"63.9"	"63.2"	""	"569"	"24"	"34.000"	"27.000"	"0.104251489987309"	"25"	"9.9E-05"	"0.000438"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGESDMK"	"[R].sAGESDMk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"641.83911"	"1282.67095"	"1282.67132"	"-0.29"	"-0.00019"	"12/66"	"12"	"66"	"387552.616149902"	"HCD"	"MS2"	"0"	"43.5"	"100.000"	"29.1936"	"6896"	"6896"	"6875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"54.9"	""	"53.0"	""	"58.3"	""	"82.0"	"107.7"	""	"582"	"18"	"34.000"	"27.000"	"0.446573541994594"	"14"	"0.0005161"	"0.006605"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGESDMK"	"[R].sAGESDMk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"Q920L7"	"Elongation of very long chain fatty acids protein 5 OS=Rattus norvegicus OX=10116 GN=Elovl5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"641.83923"	"1282.67119"	"1282.67132"	"-0.10"	"-0.00007"	"5/66"	"5"	"66"	"449204.898803711"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"28.9724"	"6847"	"6847"	"6828"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.6"	""	"51.3"	""	"55.4"	""	"65.6"	""	"105.8"	"112.7"	""	"584"	"26"	"34.000"	"27.000"	"0.0728421660267342"	"14"	"0.008522"	"0.1089"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENISK"	"[K].sFENISk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"641.87408"	"1282.74089"	"1282.74072"	"0.13"	"0.00008"	"6/64"	"6"	"64"	"622191.145202637"	"HCD"	"MS2"	"17.97031"	"59.2"	"100.000"	"58.9221"	"18978"	"18978"	"18957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.7"	""	"76.4"	""	"76.0"	""	"102.0"	""	"116.7"	"108.5"	""	"477"	"30"	"33.000"	"26.000"	"0.0264538193440083"	"25"	"0.0001991"	"0.003794"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFENISK"	"[K].sFENISk.[W]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"P35281"	"Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"641.87476"	"1282.74224"	"1282.74072"	"1.18"	"0.00076"	"10/64"	"10"	"64"	"708493.34197998"	"HCD"	"MS2"	"22.14277"	"68.6"	"100.000"	"59.1801"	"19048"	"19048"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.3"	""	"88.6"	""	"108.5"	""	"101.1"	""	"125.9"	"130.1"	""	"460"	"21"	"33.000"	"26.000"	"0.170109213263395"	"24"	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLAGEVAK"	"[R].hLAGEVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"428.26627"	"1282.78424"	"1282.78834"	"-3.19"	"-0.00137"	"8/56"	"8"	"56"	"9705742.35760498"	"HCD"	"MS2"	"33.2874"	"468.6"	"100.000"	"32.4332"	"8196"	"8196"	"8180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"650.6"	""	"601.5"	""	"650.2"	""	"795.1"	""	"867.7"	"879.7"	""	"285"	"27"	"31.000"	"24.000"	"0.0304659597754068"	"17"	"0.0001991"	"0.003671"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLAGEVAK"	"[R].hLAGEVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"428.26682"	"1282.78589"	"1282.78834"	"-1.91"	"-0.00082"	"8/56"	"8"	"56"	"9107100.98754883"	"HCD"	"MS2"	"33.33134"	"434.5"	"100.000"	"32.3186"	"8186"	"8186"	"8174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"610.8"	""	"544.2"	""	"596.9"	""	"751.2"	""	"789.1"	"828.3"	""	"273"	"22"	"31.000"	"24.000"	"0.0774698386382667"	"16"	"0.0001991"	"0.002641"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLAGEVAK"	"[R].hLAGEVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"641.89709"	"1282.78691"	"1282.78834"	"-1.11"	"-0.00071"	"5/56"	"5"	"56"	"387718.587402344"	"HCD"	"MS2"	"41.05364"	"37.0"	"100.000"	"32.3894"	"8215"	"8215"	"8198"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.7"	""	"49.8"	""	"49.0"	""	"66.9"	""	"72.9"	"66.8"	""	"271"	"16"	"31.000"	"24.000"	"0.304746899090748"	"21"	"0.00394"	"0.04355"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVHLEGK"	"[K].aAVHLEGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"428.26718"	"1282.78699"	"1282.78834"	"-1.05"	"-0.00045"	"6/56"	"6"	"56"	"11727947.9362793"	"HCD"	"MS2"	"7.005413"	"515.3"	"100.000"	"37.3248"	"10176"	"10176"	"10162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"790.8"	""	"720.7"	""	"722.0"	""	"825.2"	""	"906.1"	"916.6"	""	"271"	"35"	"31.000"	"24.000"	"0.00429476391242393"	"15"	"9.9E-05"	"0.0009831"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVHLEGK"	"[K].aAVHLEGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"428.26746"	"1282.78781"	"1282.78834"	"-0.41"	"-0.00018"	"11/56"	"11"	"56"	"10154726.3029175"	"HCD"	"MS2"	"4.888358"	"413.9"	"100.000"	"37.2265"	"10173"	"10173"	"10158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"603.7"	""	"590.6"	""	"565.8"	""	"683.3"	""	"727.6"	"752.4"	""	"269"	"32"	"31.000"	"24.000"	"0.00876440190011833"	"14"	"0.0001991"	"0.002414"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEDFSK"	"[K].aEEDFSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"642.34729"	"1283.68730"	"1283.68835"	"-0.82"	"-0.00052"	"6/56"	"6"	"56"	"1714269.72503662"	"HCD"	"MS2"	"31.65387"	"145.5"	"100.000"	"44.9993"	"13326"	"13326"	"13299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.1"	""	"147.1"	""	"164.3"	""	"264.0"	""	"306.2"	"299.9"	""	"541"	"23"	"34.000"	"27.000"	"0.146274044356779"	"24"	"0.002559"	"0.02613"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEDFSK"	"[K].aEEDFSk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"Q68FR2"	"Bridging integrator 2 OS=Rattus norvegicus OX=10116 GN=Bin2 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"642.34851"	"1283.68974"	"1283.68835"	"1.08"	"0.00070"	"6/56"	"6"	"56"	"1486884.92034912"	"HCD"	"MS2"	"16.67084"	"123.4"	"100.000"	"45.2374"	"13389"	"13389"	"13362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.0"	""	"127.7"	""	"129.4"	""	"235.6"	""	"262.2"	"246.6"	""	"536"	"27"	"34.000"	"27.000"	"0.0521356501874874"	"24"	"0.002588"	"0.02623"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFEQGATR"	"[R].vFFEQGATR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"642.35028"	"1283.69328"	"1283.69455"	"-0.99"	"-0.00063"	"7/80"	"7"	"80"	"2169483.0994873"	"HCD"	"MS2"	"42.95355"	"123.9"	"100.000"	"68.1246"	"22676"	"22676"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.4"	""	"183.9"	""	"148.9"	""	"197.3"	""	"236.4"	"207.0"	""	"575"	"30"	"34.000"	"27.000"	"0.0301743448237543"	"19"	"9.9E-05"	"0.0004468"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFEQGATR"	"[R].vFFEQGATR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"642.35065"	"1283.69402"	"1283.69455"	"-0.42"	"-0.00027"	"8/80"	"8"	"80"	"2139311.75457764"	"HCD"	"MS2"	"5.858364"	"110.9"	"100.000"	"68.4644"	"22847"	"22847"	"22826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.2"	""	"178.5"	""	"125.3"	""	"183.5"	"1.0"	"210.7"	"199.3"	""	"570"	"49"	"34.000"	"27.000"	"0.000357145234858303"	"23"	"0"	"0.0002368"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFFEQGATR"	"[R].vFFEQGATR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"642.35114"	"1283.69499"	"1283.69455"	"0.34"	"0.00022"	"8/80"	"8"	"80"	"2005044.75994873"	"HCD"	"MS2"	"4.720912"	"111.1"	"100.000"	"68.4311"	"22801"	"22801"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.7"	""	"188.0"	""	"142.5"	""	"171.5"	"0.2"	"205.1"	"197.4"	""	"570"	"47"	"34.000"	"27.000"	"0.000534373434799214"	"19"	"0"	"0.0001205"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYEGQK"	"[K].nSYEGQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"Q91ZW6"	"Trimethyllysine dioxygenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tmlhe PE=1 SV=2"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"642.35327"	"1283.69927"	"1283.69959"	"-0.25"	"-0.00016"	"5/64"	"5"	"64"	"240634.708068848"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"27.2786"	"6164"	"6164"	"6137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"28.3"	""	"28.2"	""	"37.7"	"0.3"	"46.0"	"43.9"	""	"603"	"18"	"34.000"	"27.000"	"0.47674628384002"	""	"0.008217"	"0.1044"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LSGEYEK"	"[K].lSGEYEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"642.36493"	"1283.72258"	"1283.72474"	"-1.68"	"-0.00108"	"10/56"	"10"	"56"	"1492840.60333252"	"HCD"	"MS2"	"13.65936"	"137.2"	"100.000"	"47.7335"	"14435"	"14435"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.0"	""	"156.9"	""	"167.3"	""	"231.8"	""	"292.7"	"273.6"	""	"561"	"23"	"34.000"	"27.000"	"0.155572512484694"	"16"	"0.00212"	"0.01938"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"642.36499"	"1283.72270"	"1283.72474"	"-1.59"	"-0.00102"	"12/58"	"12"	"58"	"1693914.50543213"	"HCD"	"MS2"	"13.697"	"144.8"	"100.000"	"49.2227"	"15003"	"15003"	"14982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.5"	""	"184.5"	""	"183.9"	""	"218.3"	""	"279.0"	"305.1"	""	"561"	"34"	"34.000"	"27.000"	"0.00997545848586004"	"26"	"0.001348"	"0.01067"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"642.36499"	"1283.72270"	"1283.72474"	"-1.59"	"-0.00102"	"12/58"	"12"	"58"	"1953034.08221436"	"HCD"	"MS2"	"39.14391"	"157.1"	"100.000"	"48.5920"	"14783"	"14783"	"14766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"248.7"	""	"210.9"	""	"201.0"	""	"240.1"	""	"306.6"	"282.4"	""	"561"	"36"	"34.000"	"27.000"	"0.0077612713153793"	"26"	"0.002189"	"0.02146"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"642.36511"	"1283.72295"	"1283.72474"	"-1.39"	"-0.00090"	"6/58"	"6"	"58"	"9187226.36248779"	"HCD"	"MS2"	"0"	"772.3"	"100.000"	"38.9783"	"10850"	"10850"	"10829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1057.2"	""	"935.7"	""	"954.7"	""	"1255.3"	""	"1542.8"	"1590.7"	""	"561"	"31"	"34.000"	"27.000"	"0.0209378876734024"	"22"	"0.003786"	"0.0405"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSADYEK"	"[R].lSADYEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.2174"	"0.0000"	"1"	"1"	"1"	"642.36517"	"1283.72307"	"1283.72474"	"-1.30"	"-0.00083"	"10/56"	"10"	"56"	"870394.749267578"	"HCD"	"MS2"	"0"	"85.9"	"100.000"	"52.9334"	"16545"	"16545"	"16514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.9"	""	"73.4"	""	"89.8"	""	"150.2"	"0.5"	"232.1"	"183.3"	""	"561"	"23"	"34.000"	"27.000"	"0.13581034910734"	""	"0.001348"	"0.01149"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"642.36523"	"1283.72319"	"1283.72474"	"-1.20"	"-0.00077"	"12/58"	"12"	"58"	"1754545.05090332"	"HCD"	"MS2"	"0"	"139.8"	"100.000"	"48.8993"	"14906"	"14906"	"14890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.2"	""	"178.4"	""	"190.1"	""	"223.0"	""	"269.8"	"276.1"	""	"561"	"34"	"34.000"	"27.000"	"0.0100215031101616"	"26"	"0.00212"	"0.01905"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGEYEK"	"[K].lSGEYEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.0870"	"0.0000"	"1"	"1"	"1"	"642.36542"	"1283.72356"	"1283.72474"	"-0.92"	"-0.00059"	"12/56"	"12"	"56"	"1998049.52355957"	"HCD"	"MS2"	"0"	"172.0"	"100.000"	"48.0789"	"14538"	"14538"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.3"	""	"197.9"	""	"199.6"	""	"308.1"	""	"360.2"	"338.8"	""	"536"	"23"	"34.000"	"27.000"	"0.147276954193843"	"21"	"0.002628"	"0.02749"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"642.36560"	"1283.72392"	"1283.72474"	"-0.63"	"-0.00041"	"10/58"	"10"	"58"	"1676203.9699707"	"HCD"	"MS2"	"0"	"163.1"	"100.000"	"39.1729"	"10964"	"10964"	"10950"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.7"	""	"191.0"	""	"215.4"	""	"252.1"	""	"320.3"	"352.6"	""	"518"	"23"	"34.000"	"27.000"	"0.119756684542408"	"20"	"0.001615"	"0.01489"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSFVEK"	"[K].eSSFVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"642.36566"	"1283.72405"	"1283.72474"	"-0.54"	"-0.00035"	"12/58"	"12"	"58"	"2016090.47497559"	"HCD"	"MS2"	"31.8846"	"152.3"	"100.000"	"48.9312"	"14885"	"14885"	"14863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.7"	""	"214.0"	""	"194.9"	""	"245.5"	""	"275.7"	"280.4"	""	"518"	"34"	"34.000"	"27.000"	"0.00968946423624618"	"25"	"0.001951"	"0.01684"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"642.36572"	"1283.72417"	"1283.72474"	"-0.44"	"-0.00029"	"10/58"	"10"	"58"	"8543288.66339111"	"HCD"	"MS2"	"7.990176"	"730.1"	"100.000"	"38.8910"	"10850"	"10850"	"10830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1024.2"	""	"875.1"	""	"939.2"	""	"1189.4"	""	"1376.7"	"1524.9"	""	"518"	"26"	"34.000"	"27.000"	"0.060436563813078"	"23"	"0.003357"	"0.03764"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVYEEK"	"[K].tGVYEEk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"642.36584"	"1283.72441"	"1283.72474"	"-0.25"	"-0.00016"	"6/58"	"6"	"58"	"911635.387451172"	"HCD"	"MS2"	"0"	"90.1"	"100.000"	"39.2899"	"10977"	"10977"	"10960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.0"	""	"106.8"	""	"111.3"	""	"154.1"	""	"183.9"	"192.9"	""	"518"	"20"	"34.000"	"27.000"	"0.273715734886337"	"21"	"0.002035"	"0.0178"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSDITK"	"[K].dFSDITk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"642.36597"	"1283.72466"	"1283.72474"	"-0.06"	"-0.00004"	"6/58"	"6"	"58"	"513513.270080566"	"HCD"	"MS2"	"25.2572"	"52.1"	"100.000"	"71.4784"	"24070"	"24070"	"24050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.0"	""	"63.1"	""	"52.3"	""	"94.5"	""	"99.6"	"111.3"	""	"518"	"33"	"34.000"	"27.000"	"0.0128321599418441"	"20"	"0.0001991"	"0.003274"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSADYEK"	"[R].lSADYEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.2903"	"0.0000"	"1"	"1"	"1"	"642.36609"	"1283.72490"	"1283.72474"	"0.13"	"0.00008"	"6/56"	"6"	"56"	"1183008.19543457"	"HCD"	"MS2"	"6.866316"	"108.5"	"100.000"	"53.3406"	"16677"	"16677"	"16650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.3"	""	"86.4"	""	"117.1"	""	"206.9"	""	"287.7"	"240.2"	""	"521"	"31"	"34.000"	"27.000"	"0.0194449901565822"	""	"0.001261"	"0.01017"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFSDITK"	"[K].dFSDITk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"Q3B8Q1"	"Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"642.36615"	"1283.72502"	"1283.72474"	"0.22"	"0.00014"	"10/58"	"10"	"58"	"445053.282470703"	"HCD"	"MS2"	"21.82649"	"43.2"	"100.000"	"71.2991"	"23966"	"23966"	"23942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.8"	""	"46.2"	""	"53.6"	""	"66.9"	"0.8"	"90.2"	"89.9"	""	"520"	"27"	"34.000"	"27.000"	"0.0486377356495107"	"25"	"0.0001991"	"0.003654"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1739"	"0.0000"	"1"	"1"	"1"	"642.36670"	"1283.72612"	"1283.70662"	"15.19"	"0.00975"	"10/136"	"10"	"136"	"997319.960144043"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"33.7490"	"8768"	"8768"	"8745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.9"	""	"63.0"	""	"75.2"	""	"73.1"	""	"62.1"	"60.2"	"NoQuanLabels"	"515"	"46"	"34.000"	"27.000"	"0.000606425190603222"	"22"	"0.006033"	"0.07396"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1379"	"0.0000"	"1"	"1"	"1"	"642.36676"	"1283.72624"	"1283.70662"	"15.28"	"0.00981"	"11/136"	"11"	"136"	"946278.711791992"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"33.8665"	"8778"	"8778"	"8755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.9"	""	"64.7"	""	"77.2"	""	"74.4"	"0.5"	"60.1"	"55.7"	"NoQuanLabels"	"515"	"58"	"34.000"	"27.000"	"3.74780713249856E-05"	"21"	"0.0001686"	"0.001369"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1633"	"0.0000"	"1"	"1"	"1"	"642.36731"	"1283.72734"	"1283.70662"	"16.14"	"0.01036"	"10/136"	"10"	"136"	"4796915.86499023"	"HCD"	"MS2"	"0"	"157.2"	"100.000"	"33.5334"	"8642"	"8642"	"8620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"248.0"	""	"256.8"	""	"265.1"	""	"269.6"	"0.8"	"232.1"	"211.2"	"NoQuanLabels"	"559"	"49"	"34.000"	"27.000"	"0.000365916347478335"	""	"0.002462"	"0.02313"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTPGPGAQSALR"	"[R].TKTPGPGAQSALR.[A]"	""	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"1"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"642.36792"	"1283.72856"	"1283.70662"	"17.09"	"0.01097"	"11/136"	"11"	"136"	"5574015.29693604"	"HCD"	"MS2"	"0"	"173.0"	"100.000"	"33.4274"	"8636"	"8636"	"8623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.2"	""	"294.5"	""	"302.3"	""	"310.3"	"0.6"	"244.1"	"231.9"	"NoQuanLabels"	"551"	"56"	"34.000"	"27.000"	"6.22474554695879E-05"	""	"0.001488"	"0.0126"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"642.37775"	"1283.74822"	"1283.75207"	"-3.00"	"-0.00193"	"6/92"	"6"	"92"	"436412.831970215"	"HCD"	"MS2"	"100"	"33.2"	"100.000"	"56.5594"	"17982"	"17982"	"17963"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"39.4"	""	"37.0"	""	"55.8"	"0.0"	"65.3"	"68.0"	""	"491"	"26"	"33.000"	"26.000"	"0.0602631038800675"	"19"	"0.002559"	"0.02558"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.37872"	"1283.75017"	"1283.75207"	"-1.48"	"-0.00095"	"4/92"	"4"	"92"	"472077.557617188"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"56.3105"	"17916"	"17916"	"17898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.5"	""	"40.8"	""	"40.4"	""	"56.2"	"0.6"	"75.3"	"85.2"	""	"490"	"21"	"33.000"	"26.000"	"0.177486810218373"	"14"	"0.0009352"	"0.008433"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"642.37921"	"1283.75115"	"1283.75207"	"-0.72"	"-0.00046"	"6/92"	"6"	"92"	"350135.205322266"	"HCD"	"MS2"	"100"	"27.9"	"100.000"	"56.6658"	"18059"	"18059"	"18037"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"37.8"	""	"36.8"	""	"41.0"	"1.9"	"66.7"	"51.6"	""	"465"	"24"	"33.000"	"26.000"	"0.0832574216263629"	"19"	"0.002189"	"0.02136"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"642.37952"	"1283.75176"	"1283.75207"	"-0.24"	"-0.00016"	"9/92"	"9"	"92"	"430068.853759766"	"HCD"	"MS2"	"70.66827"	"32.4"	"100.000"	"58.1397"	"18624"	"18624"	"18594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"44.4"	""	"49.9"	""	"48.0"	""	"59.9"	"67.3"	""	"468"	"14"	"33.000"	"26.000"	"1.04523960563325"	"15"	"0.002525"	"0.02455"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"642.38013"	"1283.75298"	"1283.75207"	"0.71"	"0.00046"	"6/92"	"6"	"92"	"364327.36315918"	"HCD"	"MS2"	"100"	"30.2"	"100.000"	"56.9444"	"18137"	"18137"	"18110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"42.1"	""	"42.3"	""	"45.2"	"0.4"	"60.0"	"63.4"	""	"448"	"26"	"33.000"	"26.000"	"0.0523899541459695"	"18"	"0.0001991"	"0.005731"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEITLPPTR"	"[K].qEITLPPTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"Q9EPF2"	"Cell surface glycoprotein MUC18 OS=Rattus norvegicus OX=10116 GN=Mcam PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.38086"	"1283.75444"	"1283.75207"	"1.85"	"0.00119"	"7/92"	"7"	"92"	"829955.139465332"	"HCD"	"MS2"	"72.75052"	"68.0"	"100.000"	"57.2445"	"18294"	"18294"	"18263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.7"	""	"80.8"	""	"101.0"	""	"73.3"	""	"77.9"	"246.7"	""	"465"	"20"	"33.000"	"26.000"	"0.212531328641833"	"14"	"0.0001991"	"0.003468"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHLAEK"	"[R].lDHLAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"428.59464"	"1283.76935"	"1283.77236"	"-2.34"	"-0.00100"	"9/56"	"9"	"56"	"2868937.27880859"	"HCD"	"MS2"	"60.46402"	"146.4"	"100.000"	"48.3800"	"14661"	"14661"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.5"	"3.7"	"171.7"	""	"163.0"	""	"236.0"	"0.8"	"333.9"	"263.6"	""	"347"	"32"	"32.000"	"25.000"	"0.0111249861537526"	"23"	"0.001615"	"0.01414"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHLAEK"	"[R].lDHLAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"428.59512"	"1283.77082"	"1283.77236"	"-1.20"	"-0.00051"	"8/56"	"8"	"56"	"5340343.13879395"	"HCD"	"MS2"	"9.145012"	"269.7"	"100.000"	"48.1401"	"14601"	"14601"	"14577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"407.2"	""	"291.0"	""	"321.9"	""	"439.1"	""	"608.8"	"494.9"	""	"343"	"27"	"32.000"	"25.000"	"0.0329810231508092"	"19"	"0.002419"	"0.02287"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEDLHK"	"[K].aLEDLHk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P52909"	"Transcription factor jun-D OS=Rattus norvegicus OX=10116 GN=Jund PE=1 SV=1"	"P52909"	"Transcription factor jun-D OS=Rattus norvegicus OX=10116 GN=Jund PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"428.59525"	"1283.77118"	"1283.77236"	"-0.92"	"-0.00039"	"4/50"	"4"	"50"	"1785618.92877197"	"HCD"	"MS2"	"11.32205"	"99.0"	"100.000"	"44.8843"	"13279"	"13279"	"13255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.4"	""	"123.3"	""	"127.3"	""	"178.7"	"1.5"	"184.7"	"179.4"	""	"337"	"14"	"32.000"	"25.000"	"0.707293888024848"	"19"	"0.009166"	"0.1177"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHLAEK"	"[R].lDHLAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"428.59531"	"1283.77137"	"1283.77236"	"-0.77"	"-0.00033"	"9/56"	"9"	"56"	"5773467.2802124"	"HCD"	"MS2"	"6.349827"	"284.9"	"100.000"	"48.7018"	"14791"	"14791"	"14771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"388.3"	""	"285.2"	""	"338.8"	""	"436.2"	""	"700.1"	"564.0"	""	"336"	"34"	"32.000"	"25.000"	"0.0061278663083502"	"21"	"0.002834"	"0.03043"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDHLAEK"	"[R].lDHLAEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"428.59570"	"1283.77256"	"1283.77236"	"0.15"	"0.00007"	"8/56"	"8"	"56"	"3709356.94158936"	"HCD"	"MS2"	"9.026116"	"191.1"	"100.000"	"48.4429"	"14722"	"14722"	"14702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"257.3"	""	"192.9"	""	"232.6"	""	"301.7"	""	"438.1"	"394.0"	""	"340"	"24"	"32.000"	"25.000"	"0.0641872724573208"	"18"	"0.001488"	"0.0122"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"642.40118"	"1283.79509"	"1283.79751"	"-1.88"	"-0.00121"	"6/56"	"6"	"56"	"3382948.4944458"	"HCD"	"MS2"	"0"	"184.7"	"100.000"	"77.4131"	"26442"	"26442"	"26427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.8"	""	"219.3"	""	"265.2"	""	"289.8"	""	"365.6"	"394.1"	""	"242"	"23"	"30.000"	"23.000"	"0.0658848209939329"	""	"0.00192"	"0.01619"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"642.40149"	"1283.79570"	"1283.79751"	"-1.41"	"-0.00090"	"6/56"	"6"	"56"	"7226335.75799561"	"HCD"	"MS2"	"0"	"383.5"	"100.000"	"76.8381"	"26215"	"26215"	"26200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"517.3"	""	"488.8"	""	"507.2"	""	"638.1"	""	"762.7"	"724.3"	""	"242"	"23"	"30.000"	"23.000"	"0.0661889315101705"	""	"0.002588"	"0.02634"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"642.40167"	"1283.79607"	"1283.79751"	"-1.12"	"-0.00072"	"6/56"	"6"	"56"	"843131.982788086"	"HCD"	"MS2"	"7.719638"	"52.4"	"100.000"	"77.6930"	"26555"	"26555"	"26540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.3"	""	"53.7"	""	"71.0"	""	"78.7"	""	"121.2"	"112.4"	""	"242"	"24"	"30.000"	"23.000"	"0.0440337193713921"	"23"	"0.009596"	"0.128"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"642.40173"	"1283.79619"	"1283.79751"	"-1.03"	"-0.00066"	"6/56"	"6"	"56"	"8255127.6831665"	"HCD"	"MS2"	"1.366908"	"412.9"	"100.000"	"77.1222"	"26327"	"26327"	"26314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"508.5"	""	"512.0"	""	"570.3"	""	"678.9"	"1.3"	"829.8"	"817.7"	""	"242"	"22"	"30.000"	"23.000"	"0.0770522580298578"	""	"0.00296"	"0.03143"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"642.40186"	"1283.79643"	"1283.79751"	"-0.84"	"-0.00054"	"6/56"	"6"	"56"	"9022758.23742676"	"HCD"	"MS2"	"0"	"458.0"	"100.000"	"77.1845"	"26382"	"26382"	"26370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"543.0"	""	"583.2"	""	"596.2"	""	"768.5"	""	"930.0"	"930.5"	""	"238"	"23"	"30.000"	"23.000"	"0.0630299498231073"	""	"0.003001"	"0.03218"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"642.40192"	"1283.79656"	"1283.79751"	"-0.74"	"-0.00048"	"6/56"	"6"	"56"	"3662050.43682861"	"HCD"	"MS2"	"0"	"197.3"	"100.000"	"77.4846"	"26499"	"26499"	"26489"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.3"	""	"225.6"	""	"272.9"	""	"313.6"	"1.2"	"414.5"	"413.7"	""	"239"	"24"	"30.000"	"23.000"	"0.0461708537579612"	""	"0.00192"	"0.0161"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"642.40204"	"1283.79680"	"1283.79751"	"-0.55"	"-0.00035"	"6/56"	"6"	"56"	"1039646.64990234"	"HCD"	"MS2"	"40.49782"	"64.8"	"100.000"	"76.5254"	"26087"	"26087"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.9"	""	"82.7"	""	"89.9"	""	"110.2"	"1.7"	"121.3"	"110.4"	""	"239"	"24"	"30.000"	"23.000"	"0.0509762524967903"	""	"0.009312"	"0.1205"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"642.40204"	"1283.79680"	"1283.79751"	"-0.55"	"-0.00035"	"6/56"	"6"	"56"	"7288385.25933838"	"HCD"	"MS2"	"0"	"367.4"	"100.000"	"76.9104"	"26274"	"26274"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"481.0"	""	"483.1"	""	"488.8"	""	"610.9"	"2.6"	"715.5"	"702.4"	""	"239"	"23"	"30.000"	"23.000"	"0.0630039684400272"	""	"0.002559"	"0.02564"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPPLELK"	"[R].ePPLELk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"642.40210"	"1283.79692"	"1283.79751"	"-0.46"	"-0.00029"	"6/56"	"6"	"56"	"1013564.47583008"	"HCD"	"MS2"	"27.39256"	"65.8"	"100.000"	"76.6000"	"26149"	"26149"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.2"	""	"77.5"	""	"92.1"	""	"112.7"	"0.4"	"122.2"	"115.3"	""	"239"	"22"	"30.000"	"23.000"	"0.0708545762873099"	"22"	"0.009781"	"0.1305"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"642.82947"	"1284.65166"	"1284.65175"	"-0.07"	"-0.00005"	"8/82"	"8"	"82"	"647227.812072754"	"HCD"	"MS2"	"5.688625"	"19.8"	"100.000"	"69.4137"	"23234"	"23234"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"24.3"	""	"26.2"	""	"33.2"	""	"39.7"	"35.9"	"NoQuanLabels"	"495"	"38"	"33.000"	"26.000"	"0.0042128423082775"	"16"	"0.002559"	"0.0258"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"642.82990"	"1284.65251"	"1284.65175"	"0.59"	"0.00038"	"6/82"	"6"	"82"	"610392.662841797"	"HCD"	"MS2"	"6.073943"	"15.5"	"100.000"	"69.2832"	"23147"	"23147"	"23124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.6"	""	"19.9"	""	"17.7"	""	"28.7"	""	"29.5"	"33.3"	"NoQuanLabels"	"494"	"32"	"33.000"	"26.000"	"0.0152650050834189"	"16"	"0.002508"	"0.02336"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHLQWMVVR"	"[M].sAHLQWmVVR.[N]"	"N-Term(Prot)(Acetyl); M7(Oxidation)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"642.83002"	"1284.65276"	"1284.65175"	"0.78"	"0.00050"	"13/82"	"13"	"82"	"486682.881347656"	"HCD"	"MS2"	"6.880875"	"15.2"	"100.000"	"69.1167"	"23113"	"23113"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.1"	""	"18.2"	""	"20.5"	""	"25.6"	"1.0"	"29.9"	"33.3"	"NoQuanLabels"	"492"	"37"	"33.000"	"26.000"	"0.0054316916432265"	"20"	"0.001718"	"0.01495"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENIGPELQR"	"[R].eNIGPELQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"642.85968"	"1284.71208"	"1284.71093"	"0.90"	"0.00058"	"11/88"	"11"	"88"	"1765569.09161377"	"HCD"	"MS2"	"35.81839"	"116.6"	"100.000"	"45.5089"	"13499"	"13499"	"13480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.4"	""	"124.8"	""	"115.6"	""	"214.5"	""	"250.7"	"268.5"	""	"538"	"25"	"34.000"	"27.000"	"0.0945697585021123"	"23"	"0.0001991"	"0.003008"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVSSYEK"	"[K].nVSSYEk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.86469"	"1284.72209"	"1284.71999"	"1.64"	"0.00105"	"5/66"	"5"	"66"	"2195121.03369141"	"HCD"	"MS2"	"9.141036"	"198.3"	"100.000"	"38.8661"	"10804"	"10804"	"10781"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.7"	""	"235.5"	""	"248.1"	""	"362.8"	"0.1"	"412.6"	"376.4"	""	"566"	"15"	"34.000"	"27.000"	"0.896987592041307"	"14"	"0.004819"	"0.05805"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLAGDVPAAR"	"[K].wLAGDVPAAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"642.86639"	"1284.72551"	"1284.72619"	"-0.53"	"-0.00034"	"4/72"	"4"	"72"	"246858.629272461"	"HCD"	"MS2"	"20.89927"	"17.2"	"100.000"	"82.4624"	"28518"	"28518"	"28490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.5"	""	"17.1"	""	"21.4"	""	"31.6"	""	"40.9"	"32.4"	""	"534"	"11"	"34.000"	"27.000"	"1.99761256636478"	"19"	"0.003357"	"0.03779"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLAGDVPAAR"	"[K].wLAGDVPAAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"A1A5S1"	"Pre-mRNA-processing factor 6 OS=Rattus norvegicus OX=10116 GN=Prpf6 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"642.86707"	"1284.72685"	"1284.72619"	"0.52"	"0.00033"	"8/72"	"8"	"72"	"202974.668273926"	"HCD"	"MS2"	"19.34431"	"15.2"	"100.000"	"82.4090"	"28472"	"28472"	"28447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"17.3"	""	"18.9"	""	"28.5"	""	"35.0"	"30.9"	""	"581"	"18"	"34.000"	"27.000"	"0.427706781956705"	"20"	"0.003401"	"0.03836"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALEAAHK"	"[R].sALEAAHk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"428.92670"	"1284.76554"	"1284.76761"	"-1.61"	"-0.00069"	"6/62"	"6"	"62"	"7847500.87988281"	"HCD"	"MS2"	"20.06384"	"323.5"	"100.000"	"31.3630"	"7802"	"7802"	"7776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"495.5"	""	"425.0"	""	"439.0"	""	"596.6"	""	"534.2"	"572.8"	""	"444"	"30"	"33.000"	"26.000"	"0.024510545361826"	""	"9.9E-05"	"0.0005879"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SALEAAHK"	"[R].sALEAAHk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"3"	"3"	"0.6053"	"0.0000"	"1"	"1"	"1"	"428.92682"	"1284.76590"	"1284.76761"	"-1.33"	"-0.00057"	"7/62"	"7"	"62"	"7597454.45373535"	"HCD"	"MS2"	"26.54701"	"311.4"	"100.000"	"31.4840"	"7813"	"7813"	"7786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"513.0"	""	"403.2"	""	"394.0"	""	"575.2"	""	"530.8"	"532.7"	""	"427"	"38"	"33.000"	"26.000"	"0.00350265916578102"	""	"9.9E-05"	"0.0005124"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSFNEYR"	"[R].lQSFNEYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"643.33716"	"1285.66704"	"1285.67382"	"-5.27"	"-0.00339"	"6/74"	"6"	"74"	"2282170.10992432"	"HCD"	"MS2"	"23.69523"	"119.4"	"100.000"	"63.8417"	"20941"	"20941"	"20920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.3"	""	"160.4"	""	"176.3"	""	"180.0"	""	"216.6"	"220.7"	""	"498"	"25"	"33.000"	"26.000"	"0.082072818332187"	"19"	"0.0009964"	"0.008463"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSFNEYR"	"[R].lQSFNEYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"643.33789"	"1285.66850"	"1285.67382"	"-4.13"	"-0.00266"	"6/74"	"6"	"74"	"2151645.38769531"	"HCD"	"MS2"	"9.574982"	"116.0"	"100.000"	"63.8600"	"20948"	"20948"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.7"	""	"172.0"	""	"164.3"	""	"179.1"	""	"199.9"	"213.9"	""	"495"	"27"	"33.000"	"26.000"	"0.0508832922506075"	"21"	"0.0001991"	"0.005635"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSFNEYR"	"[R].lQSFNEYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"643.33813"	"1285.66899"	"1285.67382"	"-3.75"	"-0.00241"	"6/74"	"6"	"74"	"2350082.96405029"	"HCD"	"MS2"	"17.88674"	"115.6"	"100.000"	"63.7877"	"20951"	"20951"	"20937"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.4"	""	"163.7"	""	"159.8"	""	"176.7"	""	"212.4"	"203.9"	""	"487"	"27"	"33.000"	"26.000"	"0.0500609360122139"	"19"	"0.0005161"	"0.006592"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSFNEYR"	"[R].lQSFNEYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"Q63921"	"Prostaglandin G/H synthase 1 OS=Rattus norvegicus OX=10116 GN=Ptgs1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.33990"	"1285.67253"	"1285.67382"	"-1.00"	"-0.00064"	"6/74"	"6"	"74"	"768731.73046875"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"64.0167"	"21044"	"21044"	"21019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	""	"62.1"	""	"73.5"	""	"70.1"	"2.2"	"91.2"	"105.1"	""	"517"	"16"	"34.000"	"27.000"	"0.684637285829832"	"13"	"0.00455"	"0.05349"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASIPLEAVR"	"[R].tASIPLEAVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQN9"	"39S ribosomal protein L38, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl38 PE=2 SV=2"	"Q5PQN9"	"39S ribosomal protein L38, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl38 PE=2 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"643.38654"	"1285.76579"	"1285.76772"	"-1.50"	"-0.00096"	"10/84"	"10"	"84"	"759053.131652832"	"HCD"	"MS2"	"44.63209"	"49.8"	"100.000"	"71.7132"	"24166"	"24166"	"24139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.7"	""	"57.7"	""	"57.7"	""	"91.9"	"1.3"	"98.1"	"105.4"	""	"496"	"31"	"33.000"	"26.000"	"0.0194290551406021"	"24"	"0.001348"	"0.01059"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASIPLEAVR"	"[R].tASIPLEAVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQN9"	"39S ribosomal protein L38, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl38 PE=2 SV=2"	"Q5PQN9"	"39S ribosomal protein L38, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl38 PE=2 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"643.38672"	"1285.76616"	"1285.76772"	"-1.21"	"-0.00078"	"8/84"	"8"	"84"	"724848.602905273"	"HCD"	"MS2"	"33.10544"	"46.5"	"100.000"	"71.5755"	"24079"	"24079"	"24052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	""	"49.7"	""	"55.1"	""	"89.6"	"0.4"	"93.9"	"93.1"	""	"495"	"24"	"33.000"	"26.000"	"0.0938804587809862"	"18"	"0"	"0.000204"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSDVVTAVR"	"[K].lPSDVVTAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"643.38696"	"1285.76665"	"1285.76772"	"-0.83"	"-0.00053"	"8/80"	"8"	"80"	"2147256.5411377"	"HCD"	"MS2"	"25.03148"	"68.3"	"100.000"	"83.3578"	"28880"	"28880"	"28864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.3"	""	"81.6"	""	"116.2"	""	"106.5"	""	"121.0"	"137.6"	""	"497"	"32"	"33.000"	"26.000"	"0.0173111688756526"	"22"	"0.002462"	"0.02314"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSDVVTAVR"	"[K].lPSDVVTAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"643.38702"	"1285.76677"	"1285.76772"	"-0.74"	"-0.00047"	"12/80"	"12"	"80"	"518702.12310791"	"HCD"	"MS2"	"8.961915"	"21.3"	"100.000"	"83.6887"	"28985"	"28985"	"28972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"24.3"	""	"27.5"	""	"33.7"	""	"49.1"	"40.1"	""	"497"	"23"	"33.000"	"26.000"	"0.127152936131767"	"22"	"0.0005161"	"0.007016"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSDVVTAVR"	"[K].lPSDVVTAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"643.38727"	"1285.76726"	"1285.76772"	"-0.36"	"-0.00023"	"8/80"	"8"	"80"	"943203.942321777"	"HCD"	"MS2"	"31.22291"	"34.9"	"100.000"	"83.0936"	"28745"	"28745"	"28722"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.7"	""	"34.8"	""	"44.4"	""	"63.9"	"0.1"	"71.5"	"70.3"	""	"512"	"31"	"34.000"	"27.000"	"0.0207606030810583"	"22"	"0.009781"	"0.1304"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSDVVTAVR"	"[K].lPSDVVTAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"643.38727"	"1285.76726"	"1285.76772"	"-0.36"	"-0.00023"	"11/80"	"11"	"80"	"2053729.09545898"	"HCD"	"MS2"	"17.17449"	"66.8"	"100.000"	"83.3887"	"28865"	"28865"	"28848"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.2"	""	"73.9"	""	"108.2"	""	"103.9"	""	"122.9"	"128.2"	""	"512"	"39"	"34.000"	"27.000"	"0.0033747372507044"	""	"0.001453"	"0.01178"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPSDVVTAVR"	"[K].lPSDVVTAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"643.38733"	"1285.76738"	"1285.76772"	"-0.26"	"-0.00017"	"11/80"	"11"	"80"	"1028252.5078125"	"HCD"	"MS2"	"16.58275"	"37.4"	"100.000"	"83.6255"	"28989"	"28989"	"28980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.8"	""	"47.2"	""	"59.8"	""	"56.7"	""	"58.5"	"74.2"	""	"512"	"41"	"34.000"	"27.000"	"0.00212441796483692"	"24"	"0"	"0.0001791"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVPDAVGK"	"[R].aAVPDAVGk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"3"	"P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1;Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06687; P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"643.39703"	"1285.78679"	"1285.78801"	"-0.95"	"-0.00061"	"7/64"	"7"	"64"	"4720017.36798096"	"HCD"	"MS2"	"11.02709"	"271.8"	"100.000"	"51.6354"	"15982"	"15982"	"15965"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.3"	""	"310.5"	""	"327.3"	""	"483.5"	"0.7"	"570.0"	"586.4"	""	"419"	"46"	"33.000"	"26.000"	"0.000497948040047912"	"18"	"0"	"4.843E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVPDAVGK"	"[R].aAVPDAVGk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"3"	"P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1;Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06687; P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"643.39728"	"1285.78728"	"1285.78801"	"-0.57"	"-0.00036"	"8/64"	"8"	"64"	"2855586.6138916"	"HCD"	"MS2"	"8.127345"	"168.8"	"100.000"	"51.9336"	"16102"	"16102"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.6"	""	"186.9"	""	"205.6"	""	"289.6"	""	"353.6"	"382.1"	""	"414"	"46"	"33.000"	"26.000"	"0.000484139308402486"	"17"	"0"	"3.172E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVPDAVGK"	"[R].aAVPDAVGk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"3"	"P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1;Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06687; P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"643.39740"	"1285.78752"	"1285.78801"	"-0.38"	"-0.00024"	"7/64"	"7"	"64"	"5179782.5489502"	"HCD"	"MS2"	"10.24801"	"302.8"	"100.000"	"51.3498"	"15900"	"15900"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"351.0"	""	"340.7"	""	"369.6"	""	"538.4"	""	"629.1"	"649.4"	""	"422"	"46"	"33.000"	"26.000"	"0.000499209056169495"	"19"	"0"	"0.000148"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAVPDAVGK"	"[R].aAVPDAVGk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"3"	"P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1;Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06687; P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"643.39746"	"1285.78765"	"1285.78801"	"-0.28"	"-0.00018"	"8/64"	"8"	"64"	"2286491.95001221"	"HCD"	"MS2"	"4.457747"	"142.7"	"100.000"	"51.6445"	"16019"	"16019"	"15999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.4"	""	"171.3"	""	"174.1"	""	"239.8"	""	"289.9"	"316.5"	""	"422"	"60"	"33.000"	"26.000"	"2.34575394456416E-05"	"19"	"9.9E-05"	"0.0007901"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPIEIK"	"[R].eVPIEIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHK0"	"Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicus OX=10116 GN=Acot8 PE=1 SV=1"	"Q8VHK0"	"Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicus OX=10116 GN=Acot8 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"643.40973"	"1285.81218"	"1285.81316"	"-0.76"	"-0.00049"	"5/56"	"5"	"56"	"301835.248901367"	"HCD"	"MS2"	"15.06909"	"22.3"	"100.000"	"85.5517"	"29767"	"29767"	"29753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"23.6"	""	"28.1"	""	"41.3"	""	"43.4"	"44.5"	""	"336"	"19"	"32.000"	"25.000"	"0.210043517076577"	"17"	"0.008893"	"0.1136"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEQLLK"	"[K].vPEqLLk.[L]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"Q5JCS6"	"Signal-induced proliferation-associated 1-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sipa1l2 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"3"	"643.40979"	"1285.81230"	"1285.81316"	"-0.67"	"-0.00043"	"4/54"	"4"	"54"	"158271.664550781"	"HCD"	"MS2"	"29.22406"	"12.7"	"100.000"	"100.1358"	"35648"	"35648"	"35618"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.8"	""	"19.6"	""	"22.9"	""	"19.6"	""	"20.5"	"24.4"	""	"336"	"10"	"32.000"	"25.000"	"1.6342153359453"	"22"	"0.009382"	"0.1229"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVPIEIK"	"[R].eVPIEIk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8VHK0"	"Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicus OX=10116 GN=Acot8 PE=1 SV=1"	"Q8VHK0"	"Acyl-coenzyme A thioesterase 8 OS=Rattus norvegicus OX=10116 GN=Acot8 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"643.40979"	"1285.81230"	"1285.81316"	"-0.67"	"-0.00043"	"9/56"	"9"	"56"	"344069.177368164"	"HCD"	"MS2"	"35.98236"	"22.7"	"100.000"	"85.2873"	"29631"	"29631"	"29607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"20.0"	""	"36.8"	""	"39.2"	""	"45.5"	"39.0"	""	"336"	"21"	"32.000"	"25.000"	"0.123682792379116"	"16"	"0.002834"	"0.0306"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPLTATPGGR"	"[R].sTPLTATPGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.86597"	"1286.72466"	"1286.72658"	"-1.49"	"-0.00096"	"8/92"	"8"	"92"	"488214.390075684"	"HCD"	"MS2"	"100"	"30.8"	"100.000"	"36.3924"	"9835"	"9835"	"9814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.3"	""	"43.6"	""	"32.4"	""	"54.1"	""	"63.4"	"61.5"	""	"653"	"24"	"35.000"	"28.000"	"0.136736099011"	"14"	"0.001453"	"0.01181"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAAELADR"	"[R].iAQAAELADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.3922"	"0.0000"	"1"	"1"	"1"	"643.86633"	"1286.72539"	"1286.72658"	"-0.93"	"-0.00060"	"9/92"	"9"	"92"	"1925894.73095703"	"HCD"	"MS2"	"6.228157"	"90.2"	"100.000"	"62.6482"	"20488"	"20488"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.0"	""	"75.7"	""	"105.1"	""	"179.2"	""	"181.7"	"210.2"	""	"657"	"51"	"35.000"	"28.000"	"0.000260336687062835"	""	"0"	"2.115E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPLTATPGGR"	"[R].sTPLTATPGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"643.86646"	"1286.72563"	"1286.72658"	"-0.74"	"-0.00047"	"7/92"	"7"	"92"	"793354.074157715"	"HCD"	"MS2"	"9.68985"	"53.7"	"100.000"	"36.7023"	"9960"	"9960"	"9936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.3"	""	"53.6"	""	"66.6"	""	"97.1"	""	"114.5"	"116.4"	""	"652"	"34"	"35.000"	"28.000"	"0.012422745842637"	"16"	"0.0001991"	"0.005334"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPLTATPGGR"	"[R].sTPLTATPGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"P58200"	"Vesicle transport through interaction with t-SNAREs homolog 1B OS=Rattus norvegicus OX=10116 GN=Vti1b PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"643.86700"	"1286.72673"	"1286.72658"	"0.12"	"0.00008"	"8/92"	"8"	"92"	"513956.354858398"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"36.4768"	"9832"	"9832"	"9818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.9"	""	"40.2"	""	"51.0"	""	"53.9"	""	"69.1"	"58.0"	""	"684"	"27"	"35.000"	"28.000"	"0.0695066097740187"	"18"	"0.0001991"	"0.004949"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQAAELADR"	"[R].iAQAAELADR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.3922"	"0.0000"	"1"	"1"	"1"	"643.86713"	"1286.72698"	"1286.72658"	"0.31"	"0.00020"	"9/92"	"9"	"92"	"2162817.30560303"	"HCD"	"MS2"	"4.280274"	"90.4"	"100.000"	"62.7627"	"20501"	"20501"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.5"	""	"78.1"	""	"92.1"	""	"173.4"	"4.2"	"199.5"	"203.3"	""	"684"	"51"	"35.000"	"28.000"	"0.000290419722462419"	""	"0"	"5.545E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"429.58658"	"1286.74518"	"1286.74687"	"-1.31"	"-0.00056"	"8/64"	"8"	"64"	"3880370.60223389"	"HCD"	"MS2"	"2.588327"	"172.5"	"100.000"	"23.6233"	"4673"	"4673"	"4665"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.3"	""	"193.1"	""	"202.5"	""	"353.0"	"0.7"	"325.6"	"300.8"	""	"637"	"28"	"35.000"	"28.000"	"0.0517737278706529"	"26"	"0.0001686"	"0.001478"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.6053"	"0.0000"	"1"	"1"	"1"	"429.58661"	"1286.74527"	"1286.74687"	"-1.24"	"-0.00053"	"9/64"	"9"	"64"	"6447658.22015381"	"HCD"	"MS2"	"4.233396"	"273.9"	"100.000"	"23.4484"	"4643"	"4643"	"4637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"399.2"	""	"301.6"	""	"332.0"	""	"559.7"	""	"516.9"	"488.4"	""	"637"	"38"	"35.000"	"28.000"	"0.00488775509021575"	""	"0.0001686"	"0.001148"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAVSEGTK"	"[K].hAVSEGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"643.87628"	"1286.74529"	"1286.74687"	"-1.23"	"-0.00079"	"12/62"	"12"	"62"	"2646794.22625732"	"HCD"	"MS2"	"0"	"186.0"	"100.000"	"20.4432"	"3488"	"3488"	"3478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.2"	""	"122.0"	""	"131.2"	""	"365.3"	""	"514.4"	"508.3"	""	"637"	"39"	"35.000"	"28.000"	"0.00434619729003572"	"22"	"0.0001686"	"0.001853"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAVSEGTK"	"[K].hAVSEGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"429.58670"	"1286.74555"	"1286.74687"	"-1.03"	"-0.00044"	"11/62"	"11"	"62"	"18498924.1414795"	"HCD"	"MS2"	"13.59251"	"614.0"	"80.008"	"20.4294"	"3483"	"3483"	"3471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"475.6"	""	"446.3"	""	"475.2"	""	"1097.5"	"9.2"	"1764.9"	"1602.2"	""	"637"	"40"	"35.000"	"28.000"	"0.00344436713488393"	"23"	"9.9E-05"	"0.0008545"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"429.58673"	"1286.74564"	"1286.74687"	"-0.96"	"-0.00041"	"8/64"	"8"	"64"	"1944662.78735352"	"HCD"	"MS2"	"26.85783"	"107.8"	"100.000"	"23.1866"	"4543"	"4543"	"4533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.3"	""	"127.4"	""	"131.9"	""	"204.4"	""	"207.4"	"193.7"	""	"637"	"30"	"35.000"	"28.000"	"0.0317036625426461"	"22"	"9.9E-05"	"0.0008765"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"429.58673"	"1286.74564"	"1286.74687"	"-0.96"	"-0.00041"	"8/64"	"8"	"64"	"2356158.12426758"	"HCD"	"MS2"	"27.92685"	"118.8"	"100.000"	"23.3526"	"4571"	"4571"	"4558"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.5"	""	"133.1"	""	"145.7"	""	"234.1"	""	"226.7"	"225.4"	""	"637"	"32"	"35.000"	"28.000"	"0.018928205251906"	"28"	"0.0001686"	"0.001342"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAVSEGTK"	"[K].hAVSEGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"429.58673"	"1286.74564"	"1286.74687"	"-0.96"	"-0.00041"	"11/62"	"11"	"62"	"18162026.9111938"	"HCD"	"MS2"	"15.43628"	"755.7"	"100.000"	"20.4627"	"3458"	"3458"	"3445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"573.5"	""	"538.8"	""	"562.6"	""	"1373.9"	""	"2170.5"	"2009.3"	""	"637"	"40"	"35.000"	"28.000"	"0.00342065627830686"	"23"	"9.9E-05"	"0.0009739"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"643.87653"	"1286.74578"	"1286.74687"	"-0.85"	"-0.00055"	"5/64"	"5"	"64"	"136835.792053223"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"23.2073"	"4551"	"4551"	"4538"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.0"	""	"14.0"	""	"13.0"	""	"23.1"	""	"20.5"	"19.5"	""	"626"	"25"	"34.000"	"27.000"	"0.0947423902995708"	"22"	"0.00511"	"0.06465"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"643.87659"	"1286.74590"	"1286.74687"	"-0.76"	"-0.00049"	"7/64"	"7"	"64"	"394736.778137207"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"23.4398"	"4603"	"4603"	"4595"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"36.6"	""	"37.4"	""	"67.7"	""	"64.2"	"61.1"	""	"617"	"38"	"34.000"	"27.000"	"0.00526326417007463"	"27"	"0"	"0.0003021"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HESGASIK"	"[R].hESGASIk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"643.87689"	"1286.74651"	"1286.74687"	"-0.28"	"-0.00018"	"6/64"	"6"	"64"	"488091.591918945"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"23.4757"	"4653"	"4653"	"4642"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.6"	""	"48.0"	""	"42.2"	""	"87.8"	""	"82.4"	"87.7"	""	"630"	"30"	"34.000"	"27.000"	"0.030853934540374"	"25"	"9.9E-05"	"0.0006462"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAVSEGTK"	"[K].hAVSEGTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"643.87689"	"1286.74651"	"1286.74687"	"-0.28"	"-0.00018"	"5/62"	"5"	"62"	"2525010.32159424"	"HCD"	"MS2"	"0"	"183.9"	"100.000"	"20.4925"	"3470"	"3470"	"3454"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.7"	""	"131.1"	""	"126.7"	""	"344.5"	""	"517.2"	"506.6"	""	"630"	"38"	"34.000"	"27.000"	"0.00510870180668063"	"21"	"9.9E-05"	"0.0009437"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"643.87872"	"1286.75017"	"1286.75173"	"-1.21"	"-0.00078"	"7/78"	"7"	"78"	"3099893.74017334"	"HCD"	"MS2"	"2.061518"	"130.1"	"100.000"	"66.1530"	"21913"	"21913"	"21894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.9"	""	"99.5"	""	"93.1"	""	"305.3"	""	"306.0"	"304.0"	""	"697"	"48"	"35.000"	"28.000"	"0.000513100907097803"	"24"	"0"	"0.0001671"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"643.87878"	"1286.75029"	"1286.75173"	"-1.12"	"-0.00072"	"7/78"	"7"	"78"	"3032382.87615967"	"HCD"	"MS2"	"6.003658"	"137.9"	"100.000"	"66.1977"	"21898"	"21898"	"21881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.6"	""	"111.1"	""	"103.7"	""	"310.3"	""	"324.4"	"313.8"	""	"697"	"50"	"35.000"	"28.000"	"0.000342927870357755"	"25"	"0"	"0.0001596"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"643.87921"	"1286.75115"	"1286.75173"	"-0.46"	"-0.00029"	"6/78"	"6"	"78"	"552989.406188965"	"HCD"	"MS2"	"28.74549"	"31.8"	"100.000"	"65.8629"	"21795"	"21795"	"21769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"29.1"	""	"26.6"	""	"64.2"	"0.5"	"74.3"	"70.7"	""	"693"	"34"	"35.000"	"28.000"	"0.0136365101145427"	"20"	"9.9E-05"	"0.0006863"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"643.87952"	"1286.75176"	"1286.75173"	"0.02"	"0.00001"	"6/78"	"6"	"78"	"971834.944396973"	"HCD"	"MS2"	"19.03633"	"50.3"	"100.000"	"65.9078"	"21780"	"21780"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"52.5"	""	"46.2"	""	"110.6"	"0.3"	"117.4"	"105.3"	""	"691"	"34"	"35.000"	"28.000"	"0.0130751913019756"	"22"	"0"	"9.694E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETVPLER"	"[K].tLETVPLER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"643.87964"	"1286.75200"	"1286.75173"	"0.21"	"0.00013"	"6/78"	"6"	"78"	"925916.963806152"	"HCD"	"MS2"	"0"	"52.2"	"100.000"	"66.4349"	"22026"	"22026"	"22013"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"52.2"	""	"44.2"	""	"103.5"	"0.0"	"128.2"	"112.3"	""	"691"	"32"	"35.000"	"28.000"	"0.0217995762517907"	"19"	"0"	"0.0002755"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLQEPK"	"[K].dVLQEPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"643.88745"	"1286.76763"	"1286.77202"	"-3.42"	"-0.00220"	"12/62"	"12"	"62"	"2047345.34680176"	"HCD"	"MS2"	"10.98025"	"140.9"	"100.000"	"51.7724"	"16071"	"16071"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.0"	""	"140.9"	""	"143.9"	""	"284.3"	""	"322.6"	"320.8"	""	"670"	"27"	"35.000"	"28.000"	"0.0685558953302765"	""	"0.002084"	"0.01883"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLQEPK"	"[K].dVLQEPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"643.88855"	"1286.76982"	"1286.77202"	"-1.71"	"-0.00110"	"6/62"	"6"	"62"	"2094061.62512207"	"HCD"	"MS2"	"5.994765"	"147.7"	"100.000"	"52.0973"	"16169"	"16169"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.0"	""	"149.5"	""	"137.1"	""	"313.2"	""	"325.8"	"339.3"	""	"661"	"35"	"35.000"	"28.000"	"0.0115390874265673"	""	"0.001049"	"0.008793"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DVLQEPK"	"[K].dVLQEPk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"643.88892"	"1286.77056"	"1286.77202"	"-1.14"	"-0.00073"	"10/62"	"10"	"62"	"599329.317443848"	"HCD"	"MS2"	"34.49067"	"47.7"	"100.000"	"52.4268"	"16304"	"16304"	"16275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"54.0"	""	"56.6"	""	"83.8"	""	"107.6"	"102.9"	""	"661"	"10"	"35.000"	"28.000"	"3.50083356171094"	"23"	"0.004213"	"0.04736"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEGDLGK"	"[R].lPEGDLGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"643.88922"	"1286.77117"	"1286.77202"	"-0.67"	"-0.00043"	"6/60"	"6"	"60"	"5186184.93096924"	"HCD"	"MS2"	"0"	"160.6"	"100.000"	"70.4278"	"23646"	"23646"	"23632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.1"	""	"134.1"	""	"162.1"	""	"333.0"	"1.0"	"397.2"	"364.1"	""	"652"	"42"	"35.000"	"28.000"	"0.00189765648993304"	""	"0.0001991"	"0.002015"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"643.88928"	"1286.77129"	"1286.77202"	"-0.57"	"-0.00037"	"6/64"	"6"	"64"	"5426781.61022949"	"HCD"	"MS2"	"18.25657"	"380.4"	"100.000"	"53.2164"	"16660"	"16660"	"16641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"467.3"	""	"413.2"	""	"424.5"	""	"732.0"	"5.5"	"746.1"	"823.8"	""	"652"	"32"	"35.000"	"28.000"	"0.0188893755035163"	"27"	"0.001049"	"0.00864"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"643.88934"	"1286.77141"	"1286.77202"	"-0.48"	"-0.00031"	"12/64"	"12"	"64"	"3773334.8805542"	"HCD"	"MS2"	"11.97914"	"260.4"	"100.000"	"53.5040"	"16777"	"16777"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.0"	""	"243.2"	""	"309.7"	""	"495.7"	""	"516.7"	"635.9"	""	"652"	"36"	"35.000"	"28.000"	"0.00845702472050733"	""	"0.0001991"	"0.002105"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"643.88940"	"1286.77153"	"1286.77202"	"-0.38"	"-0.00025"	"7/64"	"7"	"64"	"3007709.76342773"	"HCD"	"MS2"	"12.78443"	"211.0"	"100.000"	"53.8653"	"16891"	"16891"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.5"	""	"199.8"	""	"234.7"	""	"394.1"	""	"428.8"	"525.2"	""	"652"	"32"	"35.000"	"28.000"	"0.0209999180557948"	"26"	"0.0001991"	"0.002987"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEGDLGK"	"[R].lPEGDLGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"643.88959"	"1286.77190"	"1286.77202"	"-0.10"	"-0.00006"	"6/60"	"6"	"60"	"2575810.32611084"	"HCD"	"MS2"	"4.732233"	"146.8"	"100.000"	"70.1190"	"23521"	"23521"	"23512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.0"	""	"135.0"	""	"165.1"	""	"293.2"	""	"338.0"	"321.9"	""	"650"	"45"	"35.000"	"28.000"	"0.00102774023955472"	""	"9.9E-05"	"0.0005486"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEPLGDK"	"[R].aVEPLGDk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"643.88959"	"1286.77190"	"1286.77202"	"-0.10"	"-0.00006"	"6/64"	"6"	"64"	"5858867.42736816"	"HCD"	"MS2"	"14.49237"	"418.1"	"100.000"	"53.5573"	"16765"	"16765"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"526.2"	""	"467.1"	""	"460.1"	""	"767.9"	"2.8"	"830.9"	"916.0"	""	"650"	"31"	"35.000"	"28.000"	"0.0248818897246158"	"26"	"0.0009352"	"0.00795"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEGDLGK"	"[R].lPEGDLGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"643.88977"	"1286.77226"	"1286.77202"	"0.19"	"0.00012"	"6/60"	"6"	"60"	"5434721.18280029"	"HCD"	"MS2"	"0.5986186"	"308.6"	"100.000"	"70.3199"	"23568"	"23568"	"23552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.4"	""	"248.7"	""	"325.7"	""	"636.1"	"0.1"	"752.7"	"727.6"	""	"651"	"45"	"35.000"	"28.000"	"0.000987531580455236"	""	"0.0001686"	"0.001907"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPEGDLGK"	"[R].lPEGDLGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"643.88989"	"1286.77251"	"1286.77202"	"0.38"	"0.00024"	"6/60"	"6"	"60"	"2767280.28515625"	"HCD"	"MS2"	"5.063946"	"165.2"	"100.000"	"70.0318"	"23451"	"23451"	"23432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.2"	""	"155.2"	""	"180.0"	""	"342.7"	""	"361.2"	"366.1"	""	"642"	"42"	"35.000"	"28.000"	"0.0020535488218993"	""	"9.9E-05"	"0.0009211"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFSGTQER"	"[R].sFFSGTQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.32971"	"1287.65215"	"1287.65308"	"-0.73"	"-0.00047"	"7/82"	"7"	"82"	"3262421.14141846"	"HCD"	"MS2"	"32.15823"	"188.9"	"100.000"	"51.0588"	"15785"	"15785"	"15766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.8"	""	"202.8"	""	"217.7"	""	"342.6"	"0.8"	"444.5"	"403.3"	""	"503"	"17"	"34.000"	"27.000"	"0.546434346484232"	"14"	"0.0001991"	"0.005304"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFSGTQER"	"[R].sFFSGTQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"644.33002"	"1287.65276"	"1287.65308"	"-0.25"	"-0.00016"	"7/82"	"7"	"82"	"1977991.88043213"	"HCD"	"MS2"	"20.32562"	"127.4"	"100.000"	"50.7576"	"15662"	"15662"	"15644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.1"	""	"149.3"	""	"147.3"	""	"245.4"	""	"285.0"	"262.8"	""	"526"	"37"	"34.000"	"27.000"	"0.00479684569710065"	"18"	"9.9E-05"	"0.0004321"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFFSGTQER"	"[R].sFFSGTQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"644.33002"	"1287.65276"	"1287.65308"	"-0.25"	"-0.00016"	"7/82"	"7"	"82"	"2960842.41625977"	"HCD"	"MS2"	"17.96628"	"175.9"	"100.000"	"51.1226"	"15777"	"15777"	"15763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.9"	""	"182.5"	""	"209.3"	""	"344.5"	""	"389.0"	"385.0"	""	"526"	"38"	"34.000"	"27.000"	"0.00440509976394954"	"18"	"0"	"0.0001665"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTLDVYR"	"[K].eYTLDVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.34241"	"1287.67754"	"1287.67823"	"-0.54"	"-0.00035"	"6/64"	"6"	"64"	"721870.272949219"	"HCD"	"MS2"	"51.0259"	"49.7"	"100.000"	"73.0442"	"24702"	"24702"	"24680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.3"	""	"51.9"	""	"63.2"	""	"90.2"	"1.0"	"93.6"	"108.6"	""	"637"	"19"	"35.000"	"28.000"	"0.420832659488424"	"14"	"0.0001991"	"0.003091"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTLDVYR"	"[K].eYTLDVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"644.34271"	"1287.67815"	"1287.67823"	"-0.07"	"-0.00004"	"5/64"	"5"	"64"	"521872.440185547"	"HCD"	"MS2"	"9.403628"	"36.8"	"100.000"	"73.3576"	"24830"	"24830"	"24803"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"50.5"	""	"48.9"	""	"58.5"	""	"71.5"	"65.7"	""	"639"	"31"	"35.000"	"28.000"	"0.0281495114926061"	"22"	"0.0001991"	"0.005807"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTLDVYR"	"[K].eYTLDVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"644.34290"	"1287.67851"	"1287.67823"	"0.22"	"0.00014"	"5/64"	"5"	"64"	"787473.345703125"	"HCD"	"MS2"	"38.27292"	"52.6"	"100.000"	"73.0454"	"24673"	"24673"	"24650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.0"	""	"61.2"	""	"74.5"	""	"87.7"	""	"103.8"	"105.3"	""	"655"	"30"	"35.000"	"28.000"	"0.0311323069922432"	"15"	"0.0001686"	"0.001044"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYTLDVYR"	"[K].eYTLDVYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"644.34344"	"1287.67961"	"1287.67823"	"1.07"	"0.00069"	"5/64"	"5"	"64"	"372469.0859375"	"HCD"	"MS2"	"16.41734"	"29.1"	"100.000"	"73.3612"	"24802"	"24802"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"37.9"	""	"50.1"	""	"41.6"	""	"58.9"	"54.4"	""	"650"	"31"	"35.000"	"28.000"	"0.0239818874791958"	"18"	"0.006845"	"0.08525"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFGSFEK"	"[R].dFGSFEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"644.35254"	"1287.69780"	"1287.69852"	"-0.56"	"-0.00036"	"10/58"	"10"	"58"	"2803836.09771729"	"HCD"	"MS2"	"1.049924"	"273.2"	"100.000"	"78.3104"	"26807"	"26807"	"26790"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"420.7"	""	"302.8"	""	"341.2"	""	"485.8"	""	"496.0"	"545.2"	""	"721"	"24"	"35.000"	"28.000"	"0.129988600809302"	"17"	"0.002588"	"0.02656"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFGSFEK"	"[R].dFGSFEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"P07895"	"Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus OX=10116 GN=Sod2 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"644.35278"	"1287.69829"	"1287.69852"	"-0.18"	"-0.00012"	"10/58"	"10"	"58"	"2716090.58306885"	"HCD"	"MS2"	"1.816255"	"250.9"	"100.000"	"78.4091"	"26873"	"26873"	"26855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.9"	""	"261.6"	""	"327.6"	""	"448.8"	""	"455.8"	"494.9"	""	"715"	"24"	"35.000"	"28.000"	"0.153559272568447"	"16"	"0.002525"	"0.02514"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYNNHEIR"	"[K].lYNNHEIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"644.35382"	"1287.70036"	"1287.70070"	"-0.26"	"-0.00017"	"6/66"	"6"	"66"	"264436.233520508"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"30.0002"	"7263"	"7263"	"7238"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.2"	""	"26.8"	""	"27.4"	""	"34.7"	"1.2"	"40.0"	"38.2"	""	"724"	"10"	"35.000"	"28.000"	"3.24122045128953"	"20"	"0.003317"	"0.03723"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"644.36835"	"1287.72942"	"1287.73089"	"-1.14"	"-0.00073"	"6/74"	"6"	"74"	"3057444.40075684"	"HCD"	"MS2"	"15.67194"	"197.4"	"100.000"	"31.1567"	"7722"	"7722"	"7700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.3"	""	"195.5"	""	"196.9"	""	"369.8"	""	"439.6"	"439.5"	""	"745"	"34"	"35.000"	"28.000"	"0.0134006627345514"	""	"0.0001991"	"0.00339"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"644.36877"	"1287.73027"	"1287.73089"	"-0.48"	"-0.00031"	"5/74"	"5"	"74"	"519433.305664063"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"31.4672"	"7844"	"7844"	"7822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.8"	""	"43.7"	""	"49.9"	""	"77.1"	""	"85.9"	"91.6"	""	"731"	"24"	"35.000"	"28.000"	"0.153069048050599"	"27"	"0.001217"	"0.009331"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"429.91495"	"1287.73029"	"1287.73089"	"-0.46"	"-0.00020"	"5/74"	"5"	"74"	"2810842.00952148"	"HCD"	"MS2"	"35.8924"	"161.7"	"100.000"	"31.4446"	"7797"	"7797"	"7770"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"214.4"	""	"215.2"	""	"186.2"	""	"279.7"	""	"315.1"	"325.7"	""	"740"	"22"	"35.000"	"28.000"	"0.222947046847512"	"22"	"0.001049"	"0.008816"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAVDGDPK"	"[R].qAVDGDPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"644.36920"	"1287.73113"	"1287.73089"	"0.19"	"0.00012"	"6/74"	"6"	"74"	"3885226.26611328"	"HCD"	"MS2"	"4.873744"	"246.6"	"100.000"	"31.3176"	"7745"	"7745"	"7722"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"291.2"	""	"251.1"	""	"253.6"	""	"465.0"	""	"538.2"	"546.6"	""	"742"	"37"	"35.000"	"28.000"	"0.00796845105902428"	""	"0.0001686"	"0.001637"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDLDALVAR"	"[K].sVDLDALVAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"F1LRS8"	"CD2-associated protein OS=Rattus norvegicus OX=10116 GN=Cd2ap PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"644.37732"	"1287.74736"	"1287.74698"	"0.30"	"0.00019"	"7/80"	"7"	"80"	"588378.0546875"	"HCD"	"MS2"	"44.26671"	"22.4"	"100.000"	"100.1185"	"35613"	"35613"	"35588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"27.0"	""	"29.8"	""	"42.8"	""	"42.7"	"44.1"	""	"876"	"22"	"36.000"	"29.000"	"0.305825792985801"	"20"	"0"	"0.0002096"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLTELK"	"[R].ePLTELk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"644.39996"	"1287.79265"	"1287.79242"	"0.18"	"0.00011"	"6/56"	"6"	"56"	"808967.62677002"	"HCD"	"MS2"	"8.615188"	"58.3"	"100.000"	"72.8573"	"24626"	"24626"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"59.8"	""	"56.4"	""	"99.3"	"4.1"	"138.3"	"143.0"	""	"565"	"21"	"34.000"	"27.000"	"0.249470071868244"	"26"	"0.001488"	"0.01218"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVDGNLK"	"[K].aIVDGNLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"644.40503"	"1287.80278"	"1287.80366"	"-0.68"	"-0.00044"	"12/60"	"12"	"60"	"1892224.11376953"	"HCD"	"MS2"	"8.56871"	"139.0"	"100.000"	"63.7212"	"20924"	"20924"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.5"	""	"190.5"	""	"197.3"	""	"215.0"	"0.6"	"251.4"	"268.5"	""	"469"	"33"	"33.000"	"26.000"	"0.0112756827211461"	"22"	"0.0001686"	"0.001591"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVDGNLK"	"[K].aIVDGNLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"644.40503"	"1287.80278"	"1287.80366"	"-0.68"	"-0.00044"	"12/60"	"12"	"60"	"1978977.92333984"	"HCD"	"MS2"	"28.04853"	"146.2"	"100.000"	"63.7067"	"20886"	"20886"	"20866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"212.5"	""	"179.3"	""	"205.8"	""	"227.1"	"0.7"	"259.6"	"300.5"	""	"469"	"35"	"33.000"	"26.000"	"0.00789119630185526"	"24"	"0.0001686"	"0.001494"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGTQPEPR"	"[R].fQGTQPEPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"644.84558"	"1288.68389"	"1288.68472"	"-0.64"	"-0.00042"	"6/84"	"6"	"84"	"3503329.35119629"	"HCD"	"MS2"	"0"	"178.2"	"100.000"	"34.4882"	"9066"	"9066"	"9044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.2"	""	"211.4"	""	"253.2"	""	"281.4"	"9.6"	"327.8"	"308.9"	""	"737"	"48"	"35.000"	"28.000"	"0.000535103131081083"	"28"	"9.9E-05"	"0.0004975"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGTQPEPR"	"[R].fQGTQPEPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"P97532"	"3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Mpst PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"644.84576"	"1288.68425"	"1288.68472"	"-0.36"	"-0.00023"	"6/84"	"6"	"84"	"3041464.67797852"	"HCD"	"MS2"	"5.309049"	"154.2"	"100.000"	"34.5755"	"9065"	"9065"	"9047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.2"	""	"202.2"	""	"211.7"	""	"249.1"	"3.8"	"266.7"	"264.5"	""	"754"	"44"	"35.000"	"28.000"	"0.00138146965642233"	"22"	"0"	"0.0001543"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNHVSYGR"	"[K].nLNHVSYGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"430.23630"	"1288.69434"	"1288.69595"	"-1.25"	"-0.00054"	"8/80"	"8"	"80"	"28961898.0005493"	"HCD"	"MS2"	"6.444797"	"394.5"	"65.075"	"27.4533"	"6234"	"6234"	"6214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"625.9"	""	"541.7"	""	"559.6"	""	"534.5"	"5.8"	"715.7"	"752.9"	""	"807"	"30"	"36.000"	"29.000"	"0.0417679864255116"	"20"	"0.001103"	"0.009"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNHVSYGR"	"[K].nLNHVSYGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"430.23645"	"1288.69480"	"1288.69595"	"-0.89"	"-0.00038"	"8/80"	"8"	"80"	"24020943.4835205"	"HCD"	"MS2"	"10.20769"	"471.1"	"95.753"	"27.6947"	"6293"	"6293"	"6271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"741.0"	""	"665.6"	""	"655.8"	""	"661.5"	"11.3"	"856.2"	"869.7"	""	"807"	"29"	"36.000"	"29.000"	"0.0567340175986421"	"21"	"0.0001991"	"0.003489"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNHVSYGR"	"[K].nLNHVSYGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"644.85107"	"1288.69487"	"1288.69595"	"-0.84"	"-0.00054"	"8/80"	"8"	"80"	"1990478.54833984"	"HCD"	"MS2"	"10.37908"	"114.6"	"100.000"	"27.5034"	"6255"	"6255"	"6230"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.5"	""	"161.5"	""	"171.8"	""	"177.3"	"1.7"	"183.6"	"208.5"	""	"811"	"32"	"36.000"	"29.000"	"0.0281832360782257"	"23"	"9.9E-05"	"0.0005321"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLNHVSYGR"	"[K].nLNHVSYGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"644.85126"	"1288.69524"	"1288.69595"	"-0.55"	"-0.00036"	"10/80"	"10"	"80"	"1755167.64752197"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"27.7177"	"6302"	"6302"	"6287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.7"	""	"128.9"	""	"148.9"	""	"149.0"	""	"175.5"	"169.4"	""	"791"	"29"	"35.000"	"28.000"	"0.0554812820154254"	"25"	"0.0001991"	"0.004532"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEEILSGAQR"	"[R].gEEILSGAQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"644.85608"	"1288.70488"	"1288.70585"	"-0.75"	"-0.00048"	"9/82"	"9"	"82"	"1325897.78979492"	"HCD"	"MS2"	"9.975763"	"91.1"	"100.000"	"43.2057"	"12596"	"12596"	"12571"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.1"	""	"122.0"	""	"118.3"	""	"140.5"	"2.2"	"150.4"	"213.0"	""	"759"	"24"	"35.000"	"28.000"	"0.136839595026713"	"25"	"0"	"0.0003089"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEVTELLAR"	"[K].eEVTELLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"644.86884"	"1288.73039"	"1288.73100"	"-0.47"	"-0.00030"	"6/72"	"6"	"72"	"222576.109069824"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"87.6526"	"30612"	"30612"	"30593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"23.1"	""	"23.8"	""	"29.7"	"0.9"	"26.9"	"38.7"	""	"944"	"32"	"36.000"	"29.000"	"0.0269737916509121"	""	"0.001049"	"0.00855"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEVTELLAR"	"[K].eEVTELLAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"B0BNE2"	"DNA-directed RNA polymerases I, II, and III subunit RPABC1 OS=Rattus norvegicus OX=10116 GN=Polr2e PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"644.86945"	"1288.73161"	"1288.73100"	"0.48"	"0.00031"	"7/72"	"7"	"72"	"239319.935241699"	"HCD"	"MS2"	"12.25131"	"16.5"	"100.000"	"87.8541"	"30658"	"30658"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"20.0"	""	"20.8"	""	"27.4"	""	"38.2"	"29.0"	""	"840"	"22"	"36.000"	"29.000"	"0.266225278727909"	"25"	"0.007069"	"0.08889"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQDQIK"	"[R].qAQDQIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4103"	"0.0000"	"1"	"1"	"1"	"644.88513"	"1288.76299"	"1288.76252"	"0.36"	"0.00023"	"12/60"	"12"	"60"	"1129244.47351074"	"HCD"	"MS2"	"0"	"95.5"	"100.000"	"30.7686"	"7566"	"7566"	"7553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.0"	""	"88.7"	""	"103.6"	""	"191.8"	""	"184.4"	"187.5"	""	"841"	"39"	"36.000"	"29.000"	"0.00492908151212988"	""	"0.0003294"	"0.006183"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAQDQIK"	"[R].qAQDQIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"644.88538"	"1288.76348"	"1288.76252"	"0.74"	"0.00048"	"12/60"	"12"	"60"	"863031.102539063"	"HCD"	"MS2"	"0"	"74.2"	"100.000"	"30.8771"	"7572"	"7572"	"7559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.6"	""	"74.9"	""	"77.6"	""	"148.8"	""	"130.0"	"147.0"	""	"844"	"39"	"36.000"	"29.000"	"0.00495806768184482"	""	"0.0001991"	"0.005882"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAVEALK"	"[K].eAAVEALk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"430.26666"	"1288.78543"	"1288.78767"	"-1.74"	"-0.00075"	"8/64"	"8"	"64"	"839678.971374512"	"HCD"	"MS2"	"34.08903"	"38.4"	"100.000"	"63.5812"	"20867"	"20867"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.2"	""	"38.5"	""	"55.4"	""	"76.0"	""	"75.0"	"68.9"	""	"648"	"16"	"35.000"	"28.000"	"0.864062207304959"	"21"	"0.001488"	"0.01252"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLDEGK"	"[R].iGVLDEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"644.89667"	"1288.78606"	"1288.78767"	"-1.25"	"-0.00081"	"6/58"	"6"	"58"	"6220948.61047363"	"HCD"	"MS2"	"0"	"445.4"	"100.000"	"77.1090"	"26353"	"26353"	"26341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"617.7"	""	"637.8"	""	"691.8"	""	"694.3"	""	"800.3"	"781.4"	""	"648"	"34"	"35.000"	"28.000"	"0.0121491252727537"	"25"	"0.0001991"	"0.003744"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLDEGK"	"[R].iGVLDEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"644.89673"	"1288.78618"	"1288.78767"	"-1.16"	"-0.00075"	"6/58"	"6"	"58"	"1805639.59899902"	"HCD"	"MS2"	"0"	"143.6"	"100.000"	"77.3352"	"26411"	"26411"	"26395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.9"	""	"201.5"	""	"223.2"	""	"217.1"	""	"265.6"	"267.3"	""	"648"	"34"	"35.000"	"28.000"	"0.0137576738718605"	""	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALALEEK"	"[K].gALALEEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.2553"	"0.0000"	"1"	"1"	"1"	"644.89673"	"1288.78618"	"1288.78767"	"-1.16"	"-0.00075"	"7/58"	"7"	"58"	"2909112.12646484"	"HCD"	"MS2"	"3.03562"	"212.0"	"100.000"	"63.1771"	"20670"	"20670"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.5"	""	"291.4"	""	"313.0"	""	"380.9"	"1.9"	"424.8"	"375.8"	""	"648"	"47"	"35.000"	"28.000"	"0.000699109188565465"	""	"0.0001686"	"0.001317"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLDEGK"	"[R].iGVLDEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"644.89673"	"1288.78618"	"1288.78767"	"-1.16"	"-0.00075"	"6/58"	"6"	"58"	"6132086.10491943"	"HCD"	"MS2"	"3.451552"	"426.2"	"100.000"	"77.0510"	"26298"	"26298"	"26287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"594.6"	""	"629.6"	""	"662.1"	""	"652.9"	""	"775.9"	"725.6"	""	"648"	"34"	"35.000"	"28.000"	"0.0121491252727537"	"25"	"0.0001991"	"0.003458"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEELAK"	"[R].lQEELAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"644.89679"	"1288.78630"	"1288.78767"	"-1.06"	"-0.00069"	"12/60"	"12"	"60"	"847346.220947266"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"64.2909"	"21121"	"21121"	"21101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.2"	""	"81.4"	""	"93.8"	""	"123.9"	"3.3"	"136.2"	"128.6"	""	"648"	"20"	"35.000"	"28.000"	"0.3051722292734"	"27"	"0.001951"	"0.01657"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLDEGK"	"[R].iGVLDEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"644.89691"	"1288.78655"	"1288.78767"	"-0.87"	"-0.00056"	"6/58"	"6"	"58"	"2303877.95220947"	"HCD"	"MS2"	"6.25393"	"178.0"	"100.000"	"77.3769"	"26457"	"26457"	"26447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.2"	""	"239.8"	""	"272.6"	""	"287.0"	"0.2"	"335.4"	"336.2"	""	"648"	"32"	"35.000"	"28.000"	"0.0183039579839186"	"23"	"0.0001686"	"0.001945"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELEIQK"	"[K].aELEIQk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"644.89697"	"1288.78667"	"1288.78767"	"-0.78"	"-0.00050"	"6/54"	"6"	"54"	"5190204.67254639"	"HCD"	"MS2"	"0"	"367.1"	"100.000"	"64.5492"	"21260"	"21260"	"21243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"543.9"	""	"482.5"	""	"445.2"	""	"647.1"	""	"682.5"	"678.7"	""	"626"	"22"	"34.000"	"27.000"	"0.179698452670893"	""	"0.004234"	"0.0482"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLDEGK"	"[R].iGVLDEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"644.89703"	"1288.78679"	"1288.78767"	"-0.68"	"-0.00044"	"6/58"	"6"	"58"	"1688408.62536621"	"HCD"	"MS2"	"25.04131"	"132.3"	"100.000"	"76.7807"	"26191"	"26191"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.6"	""	"201.7"	""	"185.0"	""	"219.4"	"0.1"	"227.7"	"222.4"	""	"626"	"33"	"34.000"	"27.000"	"0.0171610690020227"	"23"	"0.0001686"	"0.001388"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAVEALK"	"[K].eAAVEALk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"644.89709"	"1288.78691"	"1288.78767"	"-0.59"	"-0.00038"	"7/64"	"7"	"64"	"3612091.51348877"	"HCD"	"MS2"	"0"	"243.6"	"100.000"	"63.4523"	"20815"	"20815"	"20798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"338.9"	""	"283.4"	""	"299.2"	""	"419.6"	""	"516.2"	"457.4"	""	"626"	"45"	"34.000"	"27.000"	"0.000936578831258362"	""	"0.0001686"	"0.001306"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALALEEK"	"[K].gALALEEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.0652"	"0.0000"	"1"	"1"	"1"	"644.89709"	"1288.78691"	"1288.78767"	"-0.59"	"-0.00038"	"7/58"	"7"	"58"	"3631841.40002441"	"HCD"	"MS2"	"14.70152"	"255.1"	"100.000"	"62.8438"	"20567"	"20567"	"20548"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"270.7"	""	"339.4"	""	"368.0"	""	"493.0"	""	"486.2"	"464.7"	""	"626"	"46"	"34.000"	"27.000"	"0.00070557687340371"	""	"0.0001686"	"0.001624"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAVEALK"	"[K].eAAVEALk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"644.89728"	"1288.78728"	"1288.78767"	"-0.31"	"-0.00020"	"7/64"	"7"	"64"	"3866009.68347168"	"HCD"	"MS2"	"1.639517"	"273.6"	"100.000"	"63.4744"	"20791"	"20791"	"20779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"390.5"	""	"314.1"	""	"349.3"	""	"462.0"	""	"567.7"	"517.9"	""	"621"	"45"	"34.000"	"27.000"	"0.000916350464879913"	""	"9.9E-05"	"0.0005865"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALALEEK"	"[K].gALALEEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.0652"	"0.0000"	"1"	"1"	"1"	"644.89734"	"1288.78740"	"1288.78767"	"-0.21"	"-0.00014"	"7/58"	"7"	"58"	"3543378.39538574"	"HCD"	"MS2"	"15.22636"	"240.1"	"100.000"	"62.8804"	"20549"	"20549"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"248.8"	""	"343.4"	""	"313.7"	""	"481.0"	"1.2"	"457.0"	"432.1"	""	"621"	"46"	"34.000"	"27.000"	"0.000741415403344542"	""	"0.0001686"	"0.001862"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEELAK"	"[R].lQEELAk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"Q9JHZ4"	"GRIP1-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Gripap1 PE=1 SV=1"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"644.89740"	"1288.78752"	"1288.78767"	"-0.12"	"-0.00008"	"6/60"	"6"	"60"	"814897.507324219"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"64.2459"	"21136"	"21136"	"21115"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.5"	""	"80.1"	""	"85.2"	""	"124.8"	"1.5"	"139.7"	"140.5"	""	"621"	"25"	"34.000"	"27.000"	"0.109411155458692"	""	"0.001615"	"0.01355"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGVLDEGK"	"[R].iGVLDEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"644.89740"	"1288.78752"	"1288.78767"	"-0.12"	"-0.00008"	"6/58"	"6"	"58"	"1116193.40478516"	"HCD"	"MS2"	"36.95745"	"87.9"	"100.000"	"76.8325"	"26243"	"26243"	"26218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.8"	""	"127.7"	""	"137.7"	""	"147.0"	""	"158.6"	"141.2"	""	"621"	"34"	"34.000"	"27.000"	"0.0136163781659133"	"26"	"9.9E-05"	"0.0004443"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALALEEK"	"[K].gALALEEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"644.89740"	"1288.78752"	"1288.78767"	"-0.12"	"-0.00008"	"7/58"	"7"	"58"	"2675945.61340332"	"HCD"	"MS2"	"0.7359132"	"187.4"	"100.000"	"63.1504"	"20691"	"20691"	"20673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.8"	""	"259.9"	""	"279.6"	""	"343.1"	""	"355.4"	"349.0"	""	"621"	"45"	"34.000"	"27.000"	"0.00104006768858505"	""	"9.9E-05"	"0.0006964"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AELEIQK"	"[K].aELEIQk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"644.89746"	"1288.78765"	"1288.78767"	"-0.02"	"-0.00001"	"6/54"	"6"	"54"	"6083313.12683105"	"HCD"	"MS2"	"0"	"236.2"	"100.000"	"64.6034"	"21248"	"21248"	"21231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"354.8"	""	"270.2"	""	"306.2"	""	"420.8"	"0.7"	"438.6"	"447.6"	""	"621"	"21"	"34.000"	"27.000"	"0.255894884711537"	"26"	"0.004819"	"0.05784"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDVGSEWR"	"[R].vIDVGSEWR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"645.35565"	"1289.70403"	"1289.70512"	"-0.84"	"-0.00054"	"7/72"	"7"	"72"	"270326.332275391"	"HCD"	"MS2"	"20.46626"	"20.3"	"100.000"	"90.9834"	"31954"	"31954"	"31928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"33.7"	""	"26.0"	""	"34.0"	""	"24.3"	"52.1"	""	"995"	"29"	"36.000"	"29.000"	"0.0635028307383644"	"18"	"0.0001686"	"0.001891"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDVGSEWR"	"[R].vIDVGSEWR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"P62916"	"Transcription initiation factor IIB OS=Rattus norvegicus OX=10116 GN=Gtf2b PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"645.35596"	"1289.70464"	"1289.70512"	"-0.37"	"-0.00024"	"6/72"	"6"	"72"	"252673.957092285"	"HCD"	"MS2"	"14.34343"	"20.3"	"100.000"	"91.0216"	"31931"	"31931"	"31912"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"26.7"	""	"20.9"	""	"30.9"	""	"33.4"	"57.8"	""	"978"	"22"	"36.000"	"29.000"	"0.292623269984496"	"16"	"0.0001991"	"0.004943"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLQESIR"	"[K].sEVLQESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LSG8"	"Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1"	"F1LSG8"	"Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"645.36688"	"1289.72649"	"1289.72625"	"0.19"	"0.00012"	"6/84"	"6"	"84"	"382581.973571777"	"HCD"	"MS2"	"30.04661"	"35.0"	"100.000"	"52.9193"	"16505"	"16505"	"16475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	""	"43.5"	""	"48.7"	""	"52.7"	"0.1"	"62.7"	"68.6"	""	"1018"	"28"	"37.000"	"30.000"	"0.0852545923897456"	""	"0.0001991"	"0.002509"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"645.37073"	"1289.73418"	"1289.73530"	"-0.87"	"-0.00056"	"6/58"	"6"	"58"	"7226799.02484131"	"HCD"	"MS2"	"0"	"471.1"	"100.000"	"46.1603"	"13765"	"13765"	"13745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"746.1"	""	"550.0"	""	"591.0"	""	"770.6"	""	"827.5"	"983.4"	""	"1021"	"32"	"37.000"	"30.000"	"0.0304786513801049"	""	"0.004213"	"0.04689"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"645.37085"	"1289.73442"	"1289.73530"	"-0.68"	"-0.00044"	"6/58"	"6"	"58"	"5974842.76080322"	"HCD"	"MS2"	"8.966516"	"428.4"	"100.000"	"45.8540"	"13640"	"13640"	"13621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"708.3"	""	"516.5"	""	"527.6"	""	"693.1"	"5.1"	"738.4"	"868.2"	""	"990"	"32"	"36.000"	"29.000"	"0.0324044906163301"	""	"0.004234"	"0.04991"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"645.37103"	"1289.73479"	"1289.73530"	"-0.40"	"-0.00026"	"6/58"	"6"	"58"	"5670527.92333984"	"HCD"	"MS2"	"8.136302"	"412.9"	"100.000"	"45.5354"	"13545"	"13545"	"13528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"683.9"	""	"491.1"	""	"511.6"	""	"689.1"	"8.6"	"713.5"	"812.4"	""	"990"	"32"	"36.000"	"29.000"	"0.0318863786430013"	""	"0.00394"	"0.04316"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPEELEK"	"[K].sPEELEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"645.37164"	"1289.73601"	"1289.73530"	"0.55"	"0.00035"	"5/58"	"5"	"58"	"7318767.51452637"	"HCD"	"MS2"	"0"	"479.8"	"100.000"	"45.8509"	"13673"	"13673"	"13653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"799.6"	""	"536.4"	""	"602.4"	""	"751.7"	"0.2"	"874.8"	"981.9"	""	"978"	"32"	"36.000"	"29.000"	"0.0289273639111807"	""	"0.002834"	"0.03046"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDVAYQR"	"[R].lPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"645.37384"	"1289.74040"	"1289.74150"	"-0.85"	"-0.00055"	"8/66"	"8"	"66"	"613931.725036621"	"HCD"	"MS2"	"23.59659"	"32.9"	"100.000"	"79.0802"	"27120"	"27120"	"27099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"44.8"	""	"42.1"	""	"44.2"	"0.9"	"62.7"	"68.9"	""	"998"	"25"	"36.000"	"29.000"	"0.155632590246287"	"22"	"0.002035"	"0.01772"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDVAYQR"	"[R].lPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"645.37396"	"1289.74065"	"1289.74150"	"-0.66"	"-0.00043"	"9/66"	"9"	"66"	"497959.928710938"	"HCD"	"MS2"	"19.90655"	"27.9"	"100.000"	"79.7074"	"27375"	"27375"	"27353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"45.3"	""	"42.3"	""	"38.3"	""	"56.8"	"52.5"	""	"995"	"12"	"36.000"	"29.000"	"2.92949718539406"	"21"	"0.00511"	"0.06541"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDVAYQR"	"[R].lPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"645.37415"	"1289.74101"	"1289.74150"	"-0.38"	"-0.00024"	"11/66"	"11"	"66"	"2250320.67987061"	"HCD"	"MS2"	"5.958141"	"76.5"	"100.000"	"79.5062"	"27320"	"27320"	"27305"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.7"	""	"115.7"	""	"115.2"	""	"95.9"	""	"122.5"	"160.9"	""	"957"	"37"	"36.000"	"29.000"	"0.00884875034181011"	""	"0"	"0.0003395"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDVAYQR"	"[R].lPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"645.37427"	"1289.74126"	"1289.74150"	"-0.19"	"-0.00012"	"11/66"	"11"	"66"	"774426.240112305"	"HCD"	"MS2"	"17.7431"	"38.3"	"100.000"	"79.2205"	"27204"	"27204"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.7"	""	"47.2"	""	"57.3"	""	"53.1"	""	"67.0"	"83.4"	""	"957"	"27"	"36.000"	"29.000"	"0.0905486421521622"	"24"	"0.0001991"	"0.003749"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPVDVAYQR"	"[R].lPVDVAYQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"645.37445"	"1289.74162"	"1289.74150"	"0.09"	"0.00006"	"8/66"	"8"	"66"	"1998094.45300293"	"HCD"	"MS2"	"3.240339"	"67.9"	"100.000"	"79.3913"	"27246"	"27246"	"27233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.1"	""	"122.7"	""	"112.5"	""	"74.5"	""	"111.7"	"127.5"	""	"969"	"29"	"36.000"	"29.000"	"0.0560136381342072"	"28"	"9.9E-05"	"0.0004314"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNQDEK"	"[R].vVNQDEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"645.37567"	"1289.74407"	"1289.74654"	"-1.92"	"-0.00124"	"6/58"	"6"	"58"	"1926444.86126709"	"HCD"	"MS2"	"17.03838"	"153.5"	"100.000"	"33.0512"	"8446"	"8446"	"8419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.1"	""	"134.5"	""	"105.0"	""	"359.9"	"0.1"	"357.5"	"337.4"	""	"959"	"32"	"36.000"	"29.000"	"0.0294977310464382"	"26"	"0.002035"	"0.018"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTPNGAK"	"[R].vGSTPnGAk.[D]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"645.37573"	"1289.74419"	"1289.74654"	"-1.82"	"-0.00117"	"8/72"	"8"	"72"	"736502.343505859"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"33.6869"	"8743"	"8743"	"8713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.0"	""	"64.6"	""	"78.4"	""	"98.7"	"1.1"	"122.7"	"112.8"	""	"958"	"43"	"36.000"	"29.000"	"0.00245095599223808"	"23"	"0.0001991"	"0.002496"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTPNGAK"	"[R].vGSTPnGAk.[D]"	"N-Term(TMT6plex); N6(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"Q5XHY7"	"Signal transducing adapter molecule 2 OS=Rattus norvegicus OX=10116 GN=Stam2 PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"645.37585"	"1289.74443"	"1289.74654"	"-1.63"	"-0.00105"	"11/72"	"11"	"72"	"708389.438659668"	"HCD"	"MS2"	"0"	"57.4"	"100.000"	"33.8412"	"8768"	"8768"	"8739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.6"	""	"59.1"	""	"74.4"	""	"93.0"	"0.1"	"123.4"	"115.2"	""	"971"	"34"	"36.000"	"29.000"	"0.0186289867686501"	"24"	"0.0009352"	"0.008355"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVNQDEK"	"[R].vVNQDEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"645.37610"	"1289.74492"	"1289.74654"	"-1.25"	"-0.00081"	"6/58"	"6"	"58"	"1958421.31750488"	"HCD"	"MS2"	"0"	"157.2"	"100.000"	"32.9404"	"8438"	"8438"	"8415"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.5"	""	"117.1"	""	"109.2"	""	"362.8"	""	"393.9"	"357.7"	""	"970"	"25"	"36.000"	"29.000"	"0.169723406008753"	"27"	"0.002875"	"0.031"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPNSSK"	"[K].eLGPNSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"645.37610"	"1289.74492"	"1289.74654"	"-1.25"	"-0.00081"	"7/74"	"7"	"74"	"1580546.3381958"	"HCD"	"MS2"	"40.46241"	"126.6"	"100.000"	"35.6492"	"9535"	"9535"	"9512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.7"	""	"203.6"	""	"174.7"	""	"188.5"	"0.9"	"212.7"	"204.9"	""	"970"	"32"	"36.000"	"29.000"	"0.0290898671983922"	"25"	"0.0042"	"0.04539"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPNSSK"	"[K].eLGPNSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"645.37628"	"1289.74529"	"1289.74654"	"-0.97"	"-0.00062"	"12/74"	"12"	"74"	"1433305.1619873"	"HCD"	"MS2"	"21.65812"	"112.0"	"100.000"	"35.7592"	"9543"	"9543"	"9517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.6"	""	"156.7"	""	"170.7"	""	"168.1"	""	"192.5"	"180.6"	""	"970"	"23"	"36.000"	"29.000"	"0.229478360596318"	"26"	"0.007912"	"0.1003"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEEVEK"	"[K].vVEEVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"645.38879"	"1289.77031"	"1289.77169"	"-1.07"	"-0.00069"	"6/54"	"6"	"54"	"551810.891906738"	"HCD"	"MS2"	"34.04979"	"48.4"	"100.000"	"53.0736"	"16568"	"16568"	"16538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"53.7"	""	"68.8"	""	"81.4"	"3.5"	"81.5"	"96.1"	""	"839"	"21"	"36.000"	"29.000"	"0.336303947591131"	"25"	"0.001103"	"0.009034"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNLLEK"	"[R].nVnLLEk.[L]"	"N-Term(TMT6plex); N1(Deamidated); N3(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"645.38892"	"1289.77056"	"1289.77169"	"-0.88"	"-0.00057"	"6/60"	"6"	"60"	"2508871.2208252"	"HCD"	"MS2"	"15.29031"	"188.7"	"100.000"	"69.8819"	"23390"	"23390"	"23374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.6"	""	"211.7"	""	"251.7"	""	"329.6"	""	"379.4"	"367.6"	""	"839"	"21"	"36.000"	"29.000"	"0.34098240153084"	"27"	"0.003529"	"0.03854"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNLLEK"	"[R].nVnLLEk.[L]"	"N-Term(TMT6plex); N1(Deamidated); N3(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"Q66HC7"	"Transcription factor SPT20 homolog OS=Rattus norvegicus OX=10116 GN=Supt20h PE=2 SV=1"	"0"	"2"	"2"	"0.1053"	"0.0000"	"1"	"1"	"3"	"645.38910"	"1289.77092"	"1289.77169"	"-0.60"	"-0.00038"	"5/60"	"5"	"60"	"1741958.73828125"	"HCD"	"MS2"	"17.81904"	"133.8"	"100.000"	"70.0289"	"23484"	"23484"	"23465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.3"	"2.6"	"154.2"	""	"172.7"	""	"242.2"	""	"264.3"	"259.8"	""	"804"	"19"	"36.000"	"29.000"	"0.48890677225984"	""	"0.003495"	"0.03841"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AEEILEK"	"[K].aEEILEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.0312"	"0.0000"	"1"	"1"	"1"	"645.38928"	"1289.77129"	"1289.77169"	"-0.31"	"-0.00020"	"6/56"	"6"	"56"	"4738781.3817749"	"HCD"	"MS2"	"3.830899"	"338.8"	"100.000"	"69.5802"	"23268"	"23268"	"23251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"504.3"	""	"443.1"	""	"456.6"	""	"545.9"	""	"667.9"	"594.8"	""	"804"	"32"	"36.000"	"29.000"	"0.0271160267134565"	""	"0.006958"	"0.08773"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEILEK"	"[K].aEEILEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"P62914"	"60S ribosomal protein L11 OS=Rattus norvegicus OX=10116 GN=Rpl11 PE=1 SV=2"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"645.38940"	"1289.77153"	"1289.77169"	"-0.12"	"-0.00008"	"6/56"	"6"	"56"	"2575565.96899414"	"HCD"	"MS2"	"24.8399"	"193.0"	"100.000"	"69.4114"	"23233"	"23233"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"307.5"	""	"261.7"	""	"259.6"	""	"335.2"	""	"352.9"	"312.7"	""	"804"	"32"	"36.000"	"29.000"	"0.0272411886059491"	""	"0.001951"	"0.01701"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEEVEK"	"[K].vVEEVEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"645.38959"	"1289.77190"	"1289.77169"	"0.16"	"0.00010"	"10/54"	"10"	"54"	"610832.252929688"	"HCD"	"MS2"	"30.1338"	"56.4"	"100.000"	"52.8436"	"16508"	"16508"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.6"	""	"55.0"	""	"76.6"	""	"97.0"	"2.0"	"91.3"	"121.3"	""	"804"	"27"	"36.000"	"29.000"	"0.0836038068215686"	"25"	"0.001217"	"0.009378"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEQTVK"	"[K].nLEQTVk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P12847"	"Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"P12847"	"Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"645.39453"	"1289.78179"	"1289.78292"	"-0.88"	"-0.00057"	"6/64"	"6"	"64"	"1057926.20587158"	"HCD"	"MS2"	"13.57207"	"85.9"	"100.000"	"44.9165"	"13292"	"13292"	"13267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.8"	""	"58.7"	""	"64.6"	""	"94.8"	"0.3"	"93.8"	"433.5"	""	"695"	"19"	"35.000"	"28.000"	"0.475285766894557"	"24"	"0.002419"	"0.02279"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDTLLLK"	"[K].eDTLLLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HA4"	"Tax1-binding protein 1 homolog OS=Rattus norvegicus OX=10116 GN=Tax1bp1 PE=2 SV=1"	"Q66HA4"	"Tax1-binding protein 1 homolog OS=Rattus norvegicus OX=10116 GN=Tax1bp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"645.40656"	"1289.80583"	"1289.80807"	"-1.74"	"-0.00112"	"6/52"	"6"	"52"	"255097.874938965"	"HCD"	"MS2"	"48.08421"	"20.9"	"100.000"	"87.6698"	"30584"	"30584"	"30559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.0"	""	"23.2"	""	"26.6"	""	"31.5"	"0.6"	"44.1"	"45.7"	""	"635"	"18"	"35.000"	"28.000"	"0.535480585560925"	"17"	"0.008327"	"0.1062"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTELIK"	"[R].eVTELIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08950"	"Transcription initiation factor IIA subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2a2 PE=3 SV=1"	"O08950"	"Transcription initiation factor IIA subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2a2 PE=3 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"645.40741"	"1289.80754"	"1289.80807"	"-0.41"	"-0.00027"	"10/54"	"10"	"54"	"583169.260131836"	"HCD"	"MS2"	"61.37781"	"43.0"	"100.000"	"81.9174"	"28300"	"28300"	"28275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.6"	""	"50.0"	""	"55.9"	""	"76.3"	""	"85.8"	"95.1"	""	"614"	"24"	"34.000"	"27.000"	"0.109682761312642"	""	"0.001348"	"0.01107"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTELIK"	"[R].eVTELIk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O08950"	"Transcription initiation factor IIA subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2a2 PE=3 SV=1"	"O08950"	"Transcription initiation factor IIA subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2a2 PE=3 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"645.40753"	"1289.80779"	"1289.80807"	"-0.22"	"-0.00014"	"6/54"	"6"	"54"	"587651.011108398"	"HCD"	"MS2"	"61.39827"	"42.1"	"100.000"	"81.8439"	"28242"	"28242"	"28215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.9"	""	"51.7"	""	"51.6"	""	"80.0"	""	"87.5"	"74.0"	""	"612"	"26"	"34.000"	"27.000"	"0.0829318639358598"	""	"0.001217"	"0.009302"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIVEETK"	"[K].iIVEETk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"645.41058"	"1289.81389"	"1289.80807"	"4.51"	"0.00291"	"6/52"	"6"	"52"	"1126994.14874268"	"HCD"	"MS2"	"55.23315"	"97.3"	"100.000"	"64.2665"	"21144"	"21144"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.4"	""	"110.3"	""	"124.9"	""	"188.9"	""	"202.2"	"190.9"	""	"516"	"34"	"34.000"	"27.000"	"0.00938900793208194"	""	"0.0009352"	"0.008278"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYNDFER"	"[K].aFYNDFER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.81927"	"1290.63127"	"1290.63162"	"-0.27"	"-0.00017"	"7/68"	"7"	"68"	"881699.427062988"	"HCD"	"MS2"	"42.09516"	"62.4"	"100.000"	"73.5834"	"24922"	"24922"	"24897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.0"	""	"75.6"	""	"77.0"	""	"106.4"	""	"118.8"	"118.9"	""	"430"	"12"	"33.000"	"26.000"	"1.39135662385945"	"13"	"0.0001991"	"0.002693"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYNDFER"	"[K].aFYNDFER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"P12527"	"Arachidonate 5-lipoxygenase OS=Rattus norvegicus OX=10116 GN=Alox5 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"645.81958"	"1290.63188"	"1290.63162"	"0.21"	"0.00013"	"5/68"	"5"	"68"	"847269.872680664"	"HCD"	"MS2"	"51.71662"	"62.4"	"100.000"	"73.4372"	"24833"	"24833"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.3"	""	"73.5"	""	"88.3"	""	"104.6"	"0.0"	"100.8"	"123.9"	""	"432"	"8"	"33.000"	"26.000"	"3.31477268284647"	"16"	"0.007069"	"0.08984"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDILLNYHS"	"[K].sDILLNYHS.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63515"	"C4b-binding protein beta chain OS=Rattus norvegicus OX=10116 GN=C4bpb PE=2 SV=1"	"Q63515"	"C4b-binding protein beta chain OS=Rattus norvegicus OX=10116 GN=C4bpb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.84766"	"1290.68804"	"1290.68913"	"-0.85"	"-0.00055"	"6/80"	"6"	"80"	"306005.486572266"	"HCD"	"MS2"	"42.98076"	"17.4"	"100.000"	"82.7643"	"28640"	"28640"	"28614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"19.4"	""	"16.9"	""	"33.3"	"0.7"	"34.1"	"32.5"	""	"869"	"23"	"36.000"	"29.000"	"0.204639648319476"	"14"	"0.002373"	"0.02235"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMEVLDGR"	"[R].eIMEVLDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVK6"	"Coiled-coil and C2 domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Cc2d1b PE=1 SV=2"	"Q5FVK6"	"Coiled-coil and C2 domain-containing protein 1B OS=Rattus norvegicus OX=10116 GN=Cc2d1b PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"645.84973"	"1290.69219"	"1290.69250"	"-0.25"	"-0.00016"	"6/76"	"6"	"76"	"191312.165039063"	"HCD"	"MS2"	"30.45764"	"13.3"	"100.000"	"100.0874"	"35628"	"35628"	"35602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"20.0"	""	"17.7"	""	"16.1"	""	"24.5"	"28.7"	""	"873"	"26"	"36.000"	"29.000"	"0.106410442221796"	"27"	"0.0001991"	"0.00513"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"645.85297"	"1290.69866"	"1290.70037"	"-1.32"	"-0.00085"	"9/86"	"9"	"86"	"1401398.07525635"	"HCD"	"MS2"	"30.88595"	"90.2"	"100.000"	"56.9617"	"18179"	"18179"	"18153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.6"	""	"115.0"	""	"111.1"	""	"158.9"	""	"186.4"	"171.7"	""	"884"	"29"	"36.000"	"29.000"	"0.0516918730830783"	"22"	"0.0001991"	"0.002006"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"645.85303"	"1290.69878"	"1290.70037"	"-1.23"	"-0.00079"	"9/86"	"9"	"86"	"1369644.72485352"	"HCD"	"MS2"	"5.035127"	"90.9"	"100.000"	"57.5809"	"18395"	"18395"	"18375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.0"	""	"117.1"	""	"113.0"	""	"140.0"	"0.1"	"196.6"	"175.8"	""	"884"	"40"	"36.000"	"29.000"	"0.00422106723021474"	"23"	"0"	"7.644E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"645.85303"	"1290.69878"	"1290.70037"	"-1.23"	"-0.00079"	"9/86"	"9"	"86"	"1595025.36956787"	"HCD"	"MS2"	"8.498231"	"104.9"	"100.000"	"57.2586"	"18299"	"18299"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.0"	""	"142.8"	""	"130.9"	""	"173.3"	"0.2"	"213.7"	"199.7"	""	"884"	"38"	"36.000"	"29.000"	"0.00733537413087402"	"17"	"0"	"2.573E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPAQDLTFR"	"[R].gGPAQDLTFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"645.85382"	"1290.70036"	"1290.70037"	"0.00"	"0.00000"	"9/86"	"9"	"86"	"1490457.0536499"	"HCD"	"MS2"	"25.93297"	"94.1"	"100.000"	"57.2795"	"18273"	"18273"	"18250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.9"	""	"130.9"	""	"129.9"	""	"133.3"	"0.7"	"198.5"	"178.1"	""	"829"	"38"	"36.000"	"29.000"	"0.00666077149373838"	"23"	"0"	"6.143E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVPIYESPR"	"[R].tVPIYESPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"645.86548"	"1290.72368"	"1290.72552"	"-1.42"	"-0.00092"	"6/76"	"6"	"76"	"4141065.73284912"	"HCD"	"MS2"	"22.16974"	"145.5"	"100.000"	"55.7988"	"17679"	"17679"	"17662"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.8"	""	"186.5"	""	"196.7"	""	"213.1"	""	"290.6"	"294.0"	""	"894"	"29"	"36.000"	"29.000"	"0.0618454171400386"	"21"	"9.9E-05"	"0.0009622"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVPIYESPR"	"[R].tVPIYESPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"645.86554"	"1290.72380"	"1290.72552"	"-1.33"	"-0.00086"	"6/76"	"6"	"76"	"4229420.35003662"	"HCD"	"MS2"	"33.71856"	"219.1"	"100.000"	"55.4123"	"17556"	"17556"	"17538"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"315.2"	""	"276.2"	""	"285.2"	""	"342.5"	""	"433.0"	"426.9"	""	"894"	"27"	"36.000"	"29.000"	"0.0841991143001941"	"23"	"0.0001686"	"0.001581"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLENVK"	"[K].dDLENVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"645.86829"	"1290.72930"	"1290.73055"	"-0.97"	"-0.00063"	"12/58"	"12"	"58"	"1541030.25305176"	"HCD"	"MS2"	"17.62346"	"144.1"	"100.000"	"50.7566"	"15628"	"15628"	"15606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.3"	""	"130.0"	""	"127.7"	""	"277.8"	""	"369.9"	"325.0"	""	"891"	"36"	"36.000"	"29.000"	"0.0102765587257479"	""	"0.001488"	"0.01222"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLENVK"	"[K].dDLENVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"430.91513"	"1290.73084"	"1290.73055"	"0.22"	"0.00010"	"4/58"	"4"	"58"	"697422.696411133"	"HCD"	"MS2"	"45.26471"	"44.1"	"100.000"	"50.9268"	"15698"	"15698"	"15669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.9"	""	"41.0"	""	"55.4"	""	"78.9"	"0.6"	"103.3"	"101.5"	""	"863"	"19"	"36.000"	"29.000"	"0.510482431295409"	"23"	"0.004392"	"0.05221"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEVLDK"	"[K].tQEVLDk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"645.88586"	"1290.76445"	"1290.76694"	"-1.93"	"-0.00124"	"6/68"	"6"	"68"	"1170225.68188477"	"HCD"	"MS2"	"15.69957"	"105.6"	"100.000"	"47.6644"	"14407"	"14407"	"14379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.9"	""	"103.3"	""	"131.5"	""	"184.9"	""	"232.0"	"219.5"	""	"836"	"19"	"36.000"	"29.000"	"0.56777502067343"	"22"	"0.003749"	"0.04031"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEVLDK"	"[K].tQEVLDk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"645.88599"	"1290.76470"	"1290.76694"	"-1.74"	"-0.00112"	"6/68"	"6"	"68"	"760158.973571777"	"HCD"	"MS2"	"20.29833"	"74.9"	"100.000"	"47.9244"	"14475"	"14475"	"14453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.4"	""	"75.0"	""	"98.6"	""	"146.2"	""	"148.2"	"160.7"	""	"835"	"10"	"36.000"	"29.000"	"3.84287696206949"	"19"	"0.006267"	"0.07673"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQELEVK"	"[K].sQELEVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"645.88605"	"1290.76482"	"1290.76694"	"-1.64"	"-0.00106"	"12/66"	"12"	"66"	"2449860.93035889"	"HCD"	"MS2"	"35.92702"	"204.6"	"100.000"	"45.6331"	"13550"	"13550"	"13525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.9"	""	"254.4"	""	"252.2"	""	"370.8"	""	"383.0"	"389.1"	""	"836"	"34"	"36.000"	"29.000"	"0.0178721286411363"	""	"0.002525"	"0.02456"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"430.92673"	"1290.76563"	"1290.76694"	"-1.01"	"-0.00044"	"8/64"	"8"	"64"	"566642.657104492"	"HCD"	"MS2"	"33.88908"	"38.4"	"100.000"	"59.3662"	"19159"	"19159"	"19134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"39.2"	""	"48.2"	""	"66.2"	"0.0"	"74.4"	"84.5"	""	"836"	"24"	"36.000"	"29.000"	"0.181625273703717"	"17"	"0.001615"	"0.01468"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"645.88654"	"1290.76579"	"1290.76694"	"-0.89"	"-0.00057"	"7/64"	"7"	"64"	"11615719.003418"	"HCD"	"MS2"	"1.498741"	"719.9"	"89.139"	"59.2674"	"19119"	"19119"	"19104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"832.6"	""	"746.6"	""	"891.3"	""	"1288.9"	""	"1548.7"	"1537.1"	""	"836"	"40"	"36.000"	"29.000"	"0.00416079464452938"	"24"	"0.0001991"	"0.005451"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEENIK"	"[K].iSEENIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"645.88660"	"1290.76592"	"1290.76694"	"-0.79"	"-0.00051"	"6/56"	"6"	"56"	"2294555.59161377"	"HCD"	"MS2"	"37.53977"	"191.7"	"100.000"	"51.6471"	"15987"	"15987"	"15965"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.9"	""	"222.3"	""	"229.5"	""	"316.1"	""	"385.9"	"362.8"	""	"770"	"26"	"35.000"	"28.000"	"0.0960418969873036"	"21"	"0.002525"	"0.02444"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQELEVK"	"[K].sQELEVk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"645.88660"	"1290.76592"	"1290.76694"	"-0.79"	"-0.00051"	"12/66"	"12"	"66"	"2850034.20300293"	"HCD"	"MS2"	"26.42833"	"245.5"	"100.000"	"45.3627"	"13474"	"13474"	"13451"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"365.8"	""	"301.7"	""	"297.2"	""	"429.4"	""	"473.7"	"459.6"	""	"770"	"31"	"35.000"	"28.000"	"0.0312939748723178"	""	"0.002588"	"0.02652"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"645.88660"	"1290.76592"	"1290.76694"	"-0.79"	"-0.00051"	"7/64"	"7"	"64"	"13015426.1228638"	"HCD"	"MS2"	"1.472299"	"758.3"	"80.213"	"59.4884"	"19174"	"19174"	"19157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"874.3"	""	"741.4"	""	"943.4"	""	"1369.8"	""	"1649.1"	"1634.0"	""	"770"	"36"	"35.000"	"28.000"	"0.0090252809389817"	"22"	"0.0003294"	"0.00616"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEENIK"	"[K].iSEENIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"645.88672"	"1290.76616"	"1290.76694"	"-0.60"	"-0.00039"	"12/56"	"12"	"56"	"1453753.92956543"	"HCD"	"MS2"	"27.24092"	"122.6"	"100.000"	"51.9406"	"16105"	"16105"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.9"	""	"133.3"	""	"152.4"	""	"207.2"	""	"245.5"	"249.8"	""	"771"	"22"	"35.000"	"28.000"	"0.25294400015977"	"21"	"0.002189"	"0.02139"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"645.88678"	"1290.76628"	"1290.76694"	"-0.51"	"-0.00033"	"7/64"	"7"	"64"	"3324822.30474854"	"HCD"	"MS2"	"0"	"251.0"	"100.000"	"59.7762"	"19291"	"19291"	"19274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.7"	""	"256.1"	""	"302.5"	""	"416.5"	""	"539.0"	"578.5"	""	"771"	"44"	"35.000"	"28.000"	"0.00142568763305293"	"24"	"0.0001991"	"0.002252"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEELNK"	"[K].tVEELNk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"645.88678"	"1290.76628"	"1290.76694"	"-0.51"	"-0.00033"	"5/56"	"5"	"56"	"3263605.08392334"	"HCD"	"MS2"	"2.949092"	"243.8"	"100.000"	"48.2151"	"14593"	"14593"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"339.6"	""	"290.1"	""	"318.8"	""	"386.2"	""	"481.6"	"498.7"	""	"771"	"19"	"35.000"	"28.000"	"0.515257571628654"	"24"	"0.00511"	"0.06476"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEENIK"	"[K].iSEENIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"645.88684"	"1290.76641"	"1290.76694"	"-0.41"	"-0.00027"	"6/56"	"6"	"56"	"1661153.14154053"	"HCD"	"MS2"	"52.51939"	"148.1"	"100.000"	"51.2629"	"15868"	"15868"	"15848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.2"	""	"178.8"	""	"177.1"	""	"255.7"	""	"284.7"	"294.6"	""	"771"	"20"	"35.000"	"28.000"	"0.422692344613198"	"20"	"0.002462"	"0.02322"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEENIK"	"[K].iSEENIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"645.88696"	"1290.76665"	"1290.76694"	"-0.22"	"-0.00014"	"5/56"	"5"	"56"	"2143993.76843262"	"HCD"	"MS2"	"15.73245"	"173.3"	"100.000"	"51.5657"	"15987"	"15987"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.4"	""	"192.4"	""	"192.4"	""	"295.4"	""	"357.4"	"360.8"	""	"765"	"31"	"35.000"	"28.000"	"0.0310192604629094"	"24"	"0.001615"	"0.01344"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"645.88708"	"1290.76689"	"1290.76694"	"-0.03"	"-0.00002"	"12/64"	"12"	"64"	"4388217.20703125"	"HCD"	"MS2"	"41.80893"	"271.6"	"100.000"	"59.2008"	"19056"	"19056"	"19038"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"335.9"	""	"290.4"	""	"341.5"	""	"516.3"	"0.6"	"575.9"	"518.4"	""	"765"	"25"	"35.000"	"28.000"	"0.115513153305377"	"20"	"0.0001991"	"0.005702"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"645.88715"	"1290.76702"	"1290.76694"	"0.06"	"0.00004"	"7/64"	"7"	"64"	"5008251.75042725"	"HCD"	"MS2"	"0"	"360.2"	"100.000"	"59.5435"	"19229"	"19229"	"19217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"410.6"	""	"342.0"	""	"457.5"	""	"625.8"	""	"792.1"	"805.0"	""	"765"	"37"	"35.000"	"28.000"	"0.00780964763836095"	"24"	"0.0001991"	"0.004005"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"430.92731"	"1290.76737"	"1290.76694"	"0.33"	"0.00014"	"7/64"	"7"	"64"	"711112.677429199"	"HCD"	"MS2"	"35.29184"	"45.0"	"100.000"	"59.4331"	"19151"	"19151"	"19130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"55.7"	""	"57.8"	""	"76.6"	""	"92.2"	"94.8"	""	"759"	"19"	"35.000"	"28.000"	"0.456259352937308"	"15"	"0.00307"	"0.03379"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GITGIEDK"	"[R].gITGIEDk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"645.88739"	"1290.76750"	"1290.76694"	"0.44"	"0.00028"	"7/64"	"7"	"64"	"4017834.27160645"	"HCD"	"MS2"	"38.9084"	"258.1"	"100.000"	"58.9796"	"19001"	"19001"	"18984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.6"	""	"272.0"	""	"306.9"	""	"493.3"	""	"552.4"	"505.1"	""	"749"	"33"	"35.000"	"28.000"	"0.0180074335994424"	"21"	"0.0001991"	"0.002736"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITASEALK"	"[R].iTASEALk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"P15791"	"Calcium/calmodulin-dependent protein kinase type II subunit delta OS=Rattus norvegicus OX=10116 GN=Camk2d PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"645.90491"	"1290.80254"	"1290.80332"	"-0.61"	"-0.00039"	"7/62"	"7"	"62"	"1637980.93041992"	"HCD"	"MS2"	"25.1991"	"122.0"	"100.000"	"62.5555"	"20417"	"20417"	"20395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.4"	""	"142.1"	""	"161.1"	""	"226.4"	""	"234.2"	"229.4"	""	"556"	"23"	"34.000"	"27.000"	"0.124464298561029"	"20"	"0.0001991"	"0.00286"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"646.31097"	"1291.61467"	"1291.61900"	"-3.35"	"-0.00217"	"5/66"	"5"	"66"	"1472339.92449951"	"HCD"	"MS2"	"13.2707"	"84.3"	"100.000"	"73.6631"	"24925"	"24925"	"24905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.8"	""	"134.7"	""	"126.5"	""	"99.7"	""	"139.7"	"150.2"	""	"340"	"20"	"32.000"	"25.000"	"0.179245772386514"	"19"	"0.0001991"	"0.0056"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31195"	"1291.61662"	"1291.61900"	"-1.84"	"-0.00119"	"5/66"	"5"	"66"	"1586495.85455322"	"HCD"	"MS2"	"8.157347"	"89.3"	"100.000"	"73.7632"	"24995"	"24995"	"24976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.5"	""	"138.2"	""	"137.6"	""	"106.4"	"1.9"	"146.0"	"150.8"	""	"352"	"20"	"32.000"	"25.000"	"0.167306443683506"	"14"	"0.0001991"	"0.00451"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31244"	"1291.61760"	"1291.61900"	"-1.09"	"-0.00070"	"6/66"	"6"	"66"	"1338165.03387451"	"HCD"	"MS2"	"10.4072"	"86.9"	"100.000"	"73.9809"	"25054"	"25054"	"25037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.6"	""	"124.6"	""	"172.2"	""	"90.8"	""	"166.6"	"151.1"	""	"356"	"25"	"32.000"	"25.000"	"0.0593499014718559"	"14"	"0.0001991"	"0.003208"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDLYSYR"	"[K].dMDLYSYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.31256"	"1291.61785"	"1291.61900"	"-0.90"	"-0.00058"	"6/66"	"6"	"66"	"1390303.29693604"	"HCD"	"MS2"	"7.257913"	"86.9"	"100.000"	"74.0514"	"25113"	"25113"	"25096"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.8"	""	"131.2"	""	"164.8"	""	"83.4"	""	"162.3"	"150.5"	""	"356"	"24"	"32.000"	"25.000"	"0.0635945651910434"	"14"	"0.0001991"	"0.003018"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYGQSTYSR"	"[K].tYGQSTYSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"646.32825"	"1291.64922"	"1291.64800"	"0.95"	"0.00061"	"6/88"	"6"	"88"	"383946.511291504"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"28.0711"	"6442"	"6442"	"6429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.8"	""	"38.8"	""	"39.7"	""	"49.1"	"0.2"	"52.0"	"50.2"	""	"612"	"30"	"34.000"	"27.000"	"0.0330918789097169"	"20"	"0.001615"	"0.01402"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"431.24393"	"1291.71723"	"1291.72077"	"-2.74"	"-0.00118"	"9/70"	"9"	"70"	"378440.692871094"	"HCD"	"MS2"	"62.44008"	"12.2"	"100.000"	"93.4388"	"32906"	"32906"	"32882"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"16.3"	""	"18.5"	""	"17.0"	""	"21.9"	"26.0"	""	"945"	"22"	"36.000"	"29.000"	"0.273780059061701"	"24"	"0.0001991"	"0.003856"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"646.36389"	"1291.72051"	"1291.72077"	"-0.20"	"-0.00013"	"6/70"	"6"	"70"	"410155.871276855"	"HCD"	"MS2"	"38.2909"	"26.7"	"100.000"	"93.6901"	"33043"	"33043"	"33026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.4"	""	"28.6"	""	"37.1"	""	"46.2"	"0.4"	"51.4"	"56.8"	""	"885"	"12"	"36.000"	"29.000"	"2.8048734723119"	"22"	"0.001951"	"0.01709"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"646.36389"	"1291.72051"	"1291.72077"	"-0.20"	"-0.00013"	"6/70"	"6"	"70"	"522174.000915527"	"HCD"	"MS2"	"24.52785"	"32.3"	"100.000"	"93.7347"	"33025"	"33025"	"33009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.8"	""	"41.5"	""	"47.8"	""	"49.2"	"1.5"	"54.5"	"66.5"	""	"885"	"15"	"36.000"	"29.000"	"1.34559162386175"	"24"	"0.0003938"	"0.006373"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"646.36395"	"1291.72063"	"1291.72077"	"-0.11"	"-0.00007"	"7/70"	"7"	"70"	"2507427.81286621"	"HCD"	"MS2"	"1.297263"	"121.4"	"100.000"	"93.3783"	"32917"	"32917"	"32902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.5"	""	"183.9"	""	"178.1"	""	"169.0"	""	"185.1"	"216.8"	""	"885"	"46"	"36.000"	"29.000"	"0.0011992597971117"	"25"	"0"	"0.0002268"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"646.36395"	"1291.72063"	"1291.72077"	"-0.11"	"-0.00007"	"7/70"	"7"	"70"	"2592864.21057129"	"HCD"	"MS2"	"1.190643"	"124.0"	"100.000"	"93.4460"	"32909"	"32909"	"32892"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.8"	""	"185.7"	""	"190.4"	""	"161.1"	""	"193.2"	"199.8"	""	"885"	"44"	"36.000"	"29.000"	"0.00195394922953841"	"25"	"0"	"0.0001693"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"646.36401"	"1291.72075"	"1291.72077"	"-0.01"	"-0.00001"	"7/70"	"7"	"70"	"668295.905334473"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"93.0991"	"32805"	"32805"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.8"	""	"61.3"	""	"51.0"	""	"56.1"	""	"62.6"	"69.3"	""	"887"	"43"	"36.000"	"29.000"	"0.00205065982990572"	"25"	"0"	"4.465E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGFVLNR"	"[K].eIDGFVLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"646.36407"	"1291.72087"	"1291.72077"	"0.08"	"0.00005"	"7/70"	"7"	"70"	"477901.055847168"	"HCD"	"MS2"	"29.5882"	"29.0"	"100.000"	"93.1582"	"32793"	"32793"	"32769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"37.6"	""	"37.0"	""	"45.9"	""	"47.8"	"59.0"	""	"896"	"45"	"36.000"	"29.000"	"0.00149031479875714"	"25"	"9.9E-05"	"0.0007308"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDVQEIFR"	"[R].rDVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"1"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"431.24814"	"1291.72986"	"1291.73200"	"-1.66"	"-0.00071"	"6/76"	"6"	"76"	"1841634.06964111"	"HCD"	"MS2"	"28.69248"	"62.4"	"100.000"	"47.8256"	"14473"	"14473"	"14442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.8"	""	"77.7"	""	"84.8"	""	"85.3"	""	"122.1"	"133.4"	""	"914"	"47"	"36.000"	"29.000"	"0.000920271982187112"	"19"	"9.9E-05"	"0.0008869"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDVQEIFR"	"[R].rDVQEIFR.[ML]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63413"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3"	"Q63413; Q5U216"	"Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3; ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1"	"1"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"431.24890"	"1291.73215"	"1291.73200"	"0.12"	"0.00005"	"6/76"	"6"	"76"	"2145026.69622803"	"HCD"	"MS2"	"14.35033"	"68.0"	"100.000"	"48.1482"	"14566"	"14566"	"14541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.5"	""	"93.7"	""	"99.4"	""	"95.7"	"0.4"	"119.5"	"140.6"	""	"933"	"42"	"36.000"	"29.000"	"0.00293664634302883"	""	"0.0001686"	"0.001035"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAANASASK"	"[K].nAANASASk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"646.37146"	"1291.73564"	"1291.73703"	"-1.08"	"-0.00070"	"9/84"	"9"	"84"	"196467.386230469"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"23.1228"	"4483"	"4483"	"4471"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"19.0"	""	"15.0"	""	"35.4"	""	"37.6"	"29.8"	""	"918"	"31"	"36.000"	"29.000"	"0.0344994908354356"	"20"	"0.0001686"	"0.001187"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAANASASK"	"[K].nAANASASk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"646.37189"	"1291.73650"	"1291.73703"	"-0.42"	"-0.00027"	"6/84"	"6"	"84"	"126041.122436523"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"22.9336"	"4448"	"4448"	"4440"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"8.4"	""	"13.2"	""	"18.6"	""	"20.3"	"24.6"	""	"983"	"14"	"36.000"	"29.000"	"1.84299230603655"	"19"	"0.007443"	"0.09492"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISEQTGK"	"[K].aISEQTGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"646.38251"	"1291.75774"	"1291.76219"	"-3.44"	"-0.00222"	"6/68"	"6"	"68"	"990146.941650391"	"HCD"	"MS2"	"41.36662"	"82.7"	"100.000"	"34.9380"	"9249"	"9249"	"9226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.7"	""	"107.7"	""	"103.6"	""	"148.4"	""	"132.8"	"164.5"	""	"845"	"23"	"36.000"	"29.000"	"0.204092343861804"	"18"	"0.001615"	"0.0133"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISEQTGK"	"[K].aISEQTGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"646.38361"	"1291.75994"	"1291.76219"	"-1.74"	"-0.00113"	"7/68"	"7"	"68"	"4351123.42169189"	"HCD"	"MS2"	"2.868855"	"317.4"	"100.000"	"34.7640"	"9142"	"9142"	"9124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"520.6"	""	"366.3"	""	"386.8"	""	"506.5"	""	"547.9"	"683.7"	""	"837"	"44"	"36.000"	"29.000"	"0.00155129882066008"	"24"	"0.0001991"	"0.00273"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISEQTGK"	"[K].aISEQTGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"646.38391"	"1291.76055"	"1291.76219"	"-1.27"	"-0.00082"	"6/68"	"6"	"68"	"1009514.21520996"	"HCD"	"MS2"	"49.24006"	"79.7"	"100.000"	"35.0916"	"9273"	"9273"	"9247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.6"	""	"115.4"	""	"104.4"	""	"136.8"	""	"109.1"	"154.6"	""	"836"	"18"	"36.000"	"29.000"	"0.59865454189634"	"24"	"0.002525"	"0.02388"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AISEQTGK"	"[K].aISEQTGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"646.38428"	"1291.76128"	"1291.76219"	"-0.70"	"-0.00045"	"7/68"	"7"	"68"	"4365968.9510498"	"HCD"	"MS2"	"3.03763"	"325.0"	"100.000"	"34.6399"	"9128"	"9128"	"9104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"514.3"	""	"363.9"	""	"412.0"	""	"537.1"	""	"579.7"	"677.1"	""	"811"	"44"	"36.000"	"29.000"	"0.00151352938986165"	"24"	"0.0001991"	"0.002394"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPSPYK"	"[R].iEPSPYk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"646.38635"	"1291.76543"	"1291.76621"	"-0.60"	"-0.00039"	"5/52"	"5"	"52"	"2334348.93804932"	"HCD"	"MS2"	"24.06664"	"175.9"	"100.000"	"53.8816"	"16931"	"16931"	"16910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.2"	""	"217.8"	""	"215.6"	""	"297.2"	"0.6"	"375.6"	"366.0"	""	"739"	"29"	"35.000"	"28.000"	"0.0425220743714969"	"25"	"0.007104"	"0.09086"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPSPYK"	"[R].iEPSPYk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"Q66HG5"	"Transmembrane 9 superfamily member 2 OS=Rattus norvegicus OX=10116 GN=Tm9sf2 PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"646.38654"	"1291.76579"	"1291.76621"	"-0.32"	"-0.00021"	"6/52"	"6"	"52"	"2180412.25891113"	"HCD"	"MS2"	"24.93938"	"167.2"	"100.000"	"54.1991"	"17027"	"17027"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.0"	""	"191.4"	""	"201.5"	""	"297.7"	""	"361.7"	"342.9"	""	"739"	"20"	"35.000"	"28.000"	"0.340106116762797"	"21"	"0.00981"	"0.1317"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEELTK"	"[R].tIEELTk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8R5M4"	"Optineurin OS=Rattus norvegicus OX=10116 GN=Optn PE=1 SV=3"	"Q8R5M4"	"Optineurin OS=Rattus norvegicus OX=10116 GN=Optn PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"646.39825"	"1291.78923"	"1291.78734"	"1.47"	"0.00095"	"6/58"	"6"	"58"	"778067.427856445"	"HCD"	"MS2"	"46.65199"	"60.5"	"100.000"	"68.0645"	"22652"	"22652"	"22628"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.6"	""	"66.9"	""	"68.8"	""	"106.8"	""	"104.6"	"129.7"	""	"531"	"19"	"34.000"	"27.000"	"0.308364606974611"	"20"	"0.002559"	"0.02556"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEELTK"	"[R].tIEELTk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8R5M4"	"Optineurin OS=Rattus norvegicus OX=10116 GN=Optn PE=1 SV=3"	"Q8R5M4"	"Optineurin OS=Rattus norvegicus OX=10116 GN=Optn PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"646.39929"	"1291.79131"	"1291.78734"	"3.07"	"0.00198"	"5/58"	"5"	"58"	"711584.079162598"	"HCD"	"MS2"	"52.61584"	"61.3"	"100.000"	"68.0543"	"22680"	"22680"	"22657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.2"	""	"78.2"	""	"78.4"	""	"106.8"	"0.6"	"97.4"	"123.1"	""	"522"	"22"	"34.000"	"27.000"	"0.176051815229157"	"25"	"0.001615"	"0.01461"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"646.84283"	"1292.67839"	"1292.67963"	"-0.96"	"-0.00062"	"7/94"	"7"	"94"	"3282670.11437988"	"HCD"	"MS2"	"4.373255"	"185.6"	"100.000"	"42.9157"	"12443"	"12443"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"238.4"	""	"226.2"	""	"234.8"	""	"316.8"	""	"391.8"	"357.9"	""	"725"	"33"	"35.000"	"28.000"	"0.0176322612063155"	"17"	"0.0001686"	"0.001844"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"646.84308"	"1292.67888"	"1292.67963"	"-0.58"	"-0.00037"	"9/94"	"9"	"94"	"3789152.574646"	"HCD"	"MS2"	"3.02388"	"190.1"	"100.000"	"43.0330"	"12525"	"12525"	"12507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"253.7"	""	"217.4"	""	"249.8"	""	"317.6"	""	"384.7"	"382.6"	""	"720"	"35"	"35.000"	"28.000"	"0.0119757439185842"	"20"	"0"	"9.713E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"646.84326"	"1292.67925"	"1292.67963"	"-0.30"	"-0.00019"	"7/94"	"7"	"94"	"3049017.76715088"	"HCD"	"MS2"	"14.05755"	"172.0"	"100.000"	"42.7432"	"12407"	"12407"	"12383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.5"	""	"197.1"	""	"229.0"	""	"269.7"	""	"378.9"	"332.8"	""	"721"	"33"	"35.000"	"28.000"	"0.0176972289353013"	"21"	"0"	"9.019E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNTFSPEGR"	"[R].gVNTFSPEGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"P34064"	"Proteasome subunit alpha type-5 OS=Rattus norvegicus OX=10116 GN=Psma5 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"646.84369"	"1292.68010"	"1292.67963"	"0.36"	"0.00024"	"7/94"	"7"	"94"	"3374346.89099121"	"HCD"	"MS2"	"2.707705"	"175.2"	"100.000"	"43.2125"	"12564"	"12564"	"12546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.2"	""	"203.3"	""	"247.4"	""	"272.0"	"0.6"	"351.5"	"350.5"	""	"726"	"35"	"35.000"	"28.000"	"0.0105902600608242"	"24"	"0"	"0.0001231"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7903"	"0.0000"	"1"	"1"	"1"	"646.86096"	"1292.71465"	"1292.71602"	"-1.06"	"-0.00068"	"9/84"	"9"	"84"	"1701418.4019165"	"HCD"	"MS2"	"17.51033"	"96.6"	"100.000"	"53.3706"	"16723"	"16723"	"16700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.5"	""	"105.2"	""	"125.3"	""	"181.8"	""	"190.0"	"200.9"	""	"915"	"62"	"36.000"	"29.000"	"3.04362468962296E-05"	""	"0"	"2.897E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"646.86121"	"1292.71514"	"1292.71602"	"-0.68"	"-0.00044"	"9/84"	"9"	"84"	"5440832.07678223"	"HCD"	"MS2"	"0"	"243.8"	"100.000"	"53.6444"	"16834"	"16834"	"16822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"256.6"	""	"273.5"	""	"299.2"	""	"470.5"	"0.5"	"496.9"	"519.0"	""	"911"	"60"	"36.000"	"29.000"	"4.31011027002119E-05"	""	"0"	"7.662E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"646.86145"	"1292.71562"	"1292.71602"	"-0.30"	"-0.00020"	"9/84"	"9"	"84"	"3906492.12994385"	"HCD"	"MS2"	"4.736106"	"196.7"	"100.000"	"54.0448"	"16964"	"16964"	"16947"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.4"	""	"210.5"	""	"241.6"	""	"386.0"	"1.5"	"396.3"	"426.1"	""	"952"	"58"	"36.000"	"29.000"	"7.28797631760646E-05"	"21"	"0"	"7.668E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVGTGEAGFR"	"[R].vAVGTGEAGFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"646.86182"	"1292.71636"	"1292.71602"	"0.26"	"0.00017"	"10/84"	"10"	"84"	"2084343.55291748"	"HCD"	"MS2"	"11.68236"	"112.7"	"100.000"	"53.7319"	"16837"	"16837"	"16809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.5"	""	"124.2"	""	"140.4"	""	"214.9"	""	"246.6"	"237.4"	""	"936"	"40"	"36.000"	"29.000"	"0.00461578799275406"	"19"	"0"	"1.66E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEVK"	"[R].wGTDEVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"646.86560"	"1292.72392"	"1292.72507"	"-0.89"	"-0.00057"	"5/52"	"5"	"52"	"11089050.6223755"	"HCD"	"MS2"	"0.1476338"	"764.6"	"85.903"	"61.1114"	"19866"	"19866"	"19848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1068.4"	""	"1017.0"	""	"1061.9"	""	"1187.8"	""	"1433.7"	"1482.9"	""	"946"	"30"	"36.000"	"29.000"	"0.0511518258963925"	""	"0.00452"	"0.0527"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEVK"	"[R].wGTDEVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.1562"	"0.0000"	"1"	"1"	"1"	"646.86591"	"1292.72453"	"1292.72507"	"-0.42"	"-0.00027"	"5/52"	"5"	"52"	"10606640.9890137"	"HCD"	"MS2"	"0.269451"	"860.7"	"100.000"	"61.2244"	"19881"	"19881"	"19865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1245.2"	""	"1107.9"	""	"1179.1"	""	"1298.7"	""	"1616.0"	"1719.8"	""	"932"	"32"	"36.000"	"29.000"	"0.0281440061289393"	""	"0.004634"	"0.05442"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEVK"	"[R].wGTDEVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"646.86609"	"1292.72490"	"1292.72507"	"-0.13"	"-0.00009"	"6/52"	"6"	"52"	"5292462.12902832"	"HCD"	"MS2"	"0"	"438.6"	"100.000"	"60.9230"	"19758"	"19758"	"19741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"642.8"	""	"598.2"	""	"596.2"	""	"704.4"	""	"809.4"	"808.8"	""	"931"	"24"	"36.000"	"29.000"	"0.174549932545273"	""	"0.00455"	"0.05344"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEVK"	"[R].wGTDEVk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"646.86646"	"1292.72563"	"1292.72507"	"0.43"	"0.00028"	"5/52"	"5"	"52"	"4881153.17590332"	"HCD"	"MS2"	"0"	"396.8"	"100.000"	"60.8123"	"19745"	"19745"	"19730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"574.8"	""	"586.1"	""	"521.1"	""	"662.8"	""	"707.2"	"714.2"	""	"923"	"32"	"36.000"	"29.000"	"0.0317082085066568"	""	"0.004234"	"0.04817"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"646.86713"	"1292.72698"	"1292.72844"	"-1.14"	"-0.00073"	"12/60"	"12"	"60"	"2399038.32183838"	"HCD"	"MS2"	"23.30082"	"198.2"	"100.000"	"39.8122"	"11220"	"11220"	"11195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"357.4"	""	"275.9"	""	"263.7"	""	"271.2"	""	"338.7"	"371.0"	""	"958"	"34"	"36.000"	"29.000"	"0.0192015157743478"	""	"0.002189"	"0.02056"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"431.58057"	"1292.72715"	"1292.72844"	"-1.00"	"-0.00043"	"5/62"	"5"	"62"	"1169306.81103516"	"HCD"	"MS2"	"13.93542"	"62.2"	"100.000"	"65.0950"	"21448"	"21448"	"21426"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.3"	""	"79.1"	""	"85.2"	""	"105.3"	""	"112.6"	"119.1"	""	"958"	"27"	"36.000"	"29.000"	"0.107234742537423"	"20"	"0.003529"	"0.03901"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"646.86731"	"1292.72734"	"1292.72844"	"-0.85"	"-0.00055"	"12/62"	"12"	"62"	"8554050.93157959"	"HCD"	"MS2"	"4.261032"	"665.7"	"100.000"	"64.7639"	"21313"	"21313"	"21295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1037.4"	""	"862.3"	""	"961.2"	""	"1091.6"	""	"1149.6"	"1205.4"	""	"958"	"34"	"36.000"	"29.000"	"0.0171528193372163"	"20"	"0.00307"	"0.03348"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"646.86737"	"1292.72746"	"1292.72844"	"-0.76"	"-0.00049"	"12/60"	"12"	"60"	"8763819.1965332"	"HCD"	"MS2"	"0"	"658.7"	"100.000"	"40.4146"	"11465"	"11465"	"11450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1064.8"	""	"857.5"	""	"939.2"	""	"809.0"	""	"1232.7"	"1348.4"	""	"946"	"37"	"36.000"	"29.000"	"0.0104438623871794"	""	"0.003208"	"0.03457"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAASEK"	"[K].sLEAASEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	"0.0526"	"0.0000"	"1"	"1"	"1"	"431.58069"	"1292.72751"	"1292.74620"	"-14.46"	"-0.00623"	"7/68"	"7"	"68"	"3385085.277771"	"HCD"	"MS2"	"56.24874"	"162.9"	"100.000"	"40.3010"	"11384"	"11384"	"11357"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"253.5"	""	"218.2"	""	"238.6"	""	"224.4"	""	"285.4"	"328.4"	""	"946"	"19"	"36.000"	"29.000"	"0.64100459204204"	"23"	"0.008029"	"0.1018"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"431.58075"	"1292.72770"	"1292.72844"	"-0.58"	"-0.00025"	"5/62"	"5"	"62"	"1485179.32043457"	"HCD"	"MS2"	"19.22815"	"76.4"	"100.000"	"64.9191"	"21410"	"21410"	"21388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.3"	""	"99.7"	""	"106.1"	""	"130.9"	""	"139.3"	"146.8"	""	"946"	"22"	"36.000"	"29.000"	"0.328746502219501"	"16"	"0.006305"	"0.07833"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"646.86749"	"1292.72771"	"1292.72844"	"-0.57"	"-0.00037"	"12/62"	"12"	"62"	"2625340.3034668"	"HCD"	"MS2"	"1.311987"	"220.4"	"100.000"	"65.3528"	"21553"	"21553"	"21535"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"318.3"	""	"267.0"	""	"309.6"	""	"335.9"	""	"411.8"	"453.9"	""	"946"	"36"	"36.000"	"29.000"	"0.0120742771615877"	"22"	"0.001951"	"0.01661"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAASEK"	"[K].sLEAASEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	"0.3043"	"0.0000"	"1"	"1"	"1"	"431.58081"	"1292.72788"	"1292.74620"	"-14.17"	"-0.00611"	"8/68"	"8"	"68"	"3334820.03411865"	"HCD"	"MS2"	"53.8244"	"161.9"	"100.000"	"40.2029"	"11378"	"11378"	"11354"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.0"	""	"221.6"	""	"215.5"	""	"222.8"	""	"304.5"	"325.5"	""	"946"	"23"	"36.000"	"29.000"	"0.224316459028096"	""	"0.004114"	"0.04444"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"646.86761"	"1292.72795"	"1292.72844"	"-0.38"	"-0.00025"	"12/60"	"12"	"60"	"2421679.74572754"	"HCD"	"MS2"	"14.00562"	"204.9"	"100.000"	"39.8804"	"11213"	"11213"	"11194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.7"	""	"291.3"	""	"284.6"	""	"251.3"	""	"369.5"	"387.2"	""	"940"	"34"	"36.000"	"29.000"	"0.018582231143202"	""	"0.002419"	"0.02285"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"646.86768"	"1292.72807"	"1292.72844"	"-0.29"	"-0.00018"	"6/62"	"6"	"62"	"421807.335266113"	"HCD"	"MS2"	"10.17107"	"45.7"	"100.000"	"65.6327"	"21701"	"21701"	"21680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.2"	""	"54.0"	""	"62.0"	""	"76.2"	""	"82.8"	"88.7"	""	"940"	"31"	"36.000"	"29.000"	"0.0338141019661739"	"21"	"0.0001991"	"0.004871"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"646.86768"	"1292.72807"	"1292.72844"	"-0.29"	"-0.00018"	"12/62"	"12"	"62"	"8661176.64324951"	"HCD"	"MS2"	"1.666352"	"653.7"	"100.000"	"64.7399"	"21338"	"21338"	"21323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1007.4"	""	"822.5"	""	"934.4"	""	"1084.8"	""	"1141.1"	"1205.7"	""	"940"	"33"	"36.000"	"29.000"	"0.023019604510317"	"20"	"0.002875"	"0.03103"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"646.86780"	"1292.72832"	"1292.72844"	"-0.10"	"-0.00006"	"12/62"	"12"	"62"	"18454279.711792"	"HCD"	"MS2"	"3.338326"	"759.4"	"55.647"	"65.0158"	"21450"	"21450"	"21434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1179.3"	""	"934.7"	""	"1085.2"	""	"1193.0"	""	"1341.9"	"1463.9"	""	"940"	"33"	"36.000"	"29.000"	"0.0222893733072315"	"20"	"0.004234"	"0.04868"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"646.86798"	"1292.72869"	"1292.72844"	"0.19"	"0.00012"	"12/62"	"12"	"62"	"18191449.7164307"	"HCD"	"MS2"	"2.894646"	"730.8"	"51.856"	"65.0422"	"21427"	"21427"	"21410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1139.6"	""	"895.7"	""	"1029.6"	""	"1153.8"	""	"1270.4"	"1435.9"	""	"940"	"33"	"36.000"	"29.000"	"0.0230726701791723"	"20"	"0.004234"	"0.04878"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDMk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"646.86835"	"1292.72942"	"1292.72844"	"0.75"	"0.00049"	"12/62"	"12"	"62"	"3356874.86572266"	"HCD"	"MS2"	"3.585914"	"280.9"	"100.000"	"65.3080"	"21569"	"21569"	"21552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.5"	""	"338.1"	""	"391.0"	""	"421.9"	""	"511.2"	"591.7"	""	"942"	"36"	"36.000"	"29.000"	"0.0112725172126694"	"21"	"0.001999"	"0.01748"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"646.86841"	"1292.72954"	"1292.72844"	"0.85"	"0.00055"	"12/60"	"12"	"60"	"12351411.0484009"	"HCD"	"MS2"	"0"	"932.0"	"100.000"	"40.1632"	"11328"	"11328"	"11313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1615.5"	""	"1272.8"	""	"1343.9"	""	"1089.2"	""	"1715.1"	"1803.7"	""	"942"	"35"	"36.000"	"29.000"	"0.0156322289507279"	""	"0.003001"	"0.03235"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"646.86890"	"1292.73052"	"1292.72844"	"1.60"	"0.00104"	"12/60"	"12"	"60"	"15836480.1416016"	"HCD"	"MS2"	"0"	"909.4"	"78.055"	"40.1177"	"11343"	"11343"	"11325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1572.3"	""	"1219.8"	""	"1321.6"	""	"1071.9"	""	"1668.2"	"1764.2"	""	"960"	"37"	"36.000"	"29.000"	"0.010745861465128"	""	"0.004593"	"0.05422"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"646.86914"	"1292.73100"	"1292.72844"	"1.98"	"0.00128"	"12/60"	"12"	"60"	"11020514.9494629"	"HCD"	"MS2"	"0"	"803.7"	"100.000"	"40.4641"	"11450"	"11450"	"11437"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1284.5"	""	"999.6"	""	"1215.8"	""	"961.1"	""	"1532.8"	"1628.1"	""	"946"	"36"	"36.000"	"29.000"	"0.0107612108475519"	""	"0.004751"	"0.05617"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQANMGAK"	"[R].vQANmGAk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.87213"	"1292.73699"	"1292.73968"	"-2.08"	"-0.00135"	"7/70"	"7"	"70"	"654021.975891113"	"HCD"	"MS2"	"100"	"42.9"	"100.000"	"26.8844"	"6008"	"6008"	"5995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"70.4"	""	"70.3"	""	"88.2"	""	"60.0"	"61.5"	""	"896"	"16"	"36.000"	"29.000"	"1.23105658058987"	"13"	"0.007443"	"0.09481"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQANMGAK"	"[R].vQANmGAk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"646.87292"	"1292.73857"	"1292.73968"	"-0.85"	"-0.00055"	"7/70"	"7"	"70"	"973134.856201172"	"HCD"	"MS2"	"0"	"66.7"	"100.000"	"27.1754"	"6122"	"6122"	"6103"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.1"	""	"92.5"	""	"111.7"	""	"133.7"	"0.1"	"96.3"	"108.3"	""	"907"	"23"	"36.000"	"29.000"	"0.247501190004891"	"20"	"0.007069"	"0.08971"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQANMGAK"	"[R].vQANmGAk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"646.87317"	"1292.73906"	"1292.73968"	"-0.48"	"-0.00031"	"7/70"	"7"	"70"	"546396.910461426"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"27.0504"	"6037"	"6037"	"6019"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.1"	""	"53.2"	""	"59.0"	""	"73.2"	""	"44.5"	"47.8"	""	"939"	"24"	"36.000"	"29.000"	"0.17483790608652"	"20"	"0.005266"	"0.06765"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQANMGAK"	"[R].vQANmGAk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"646.87329"	"1292.73931"	"1292.73968"	"-0.29"	"-0.00019"	"7/70"	"7"	"70"	"1110290.30371094"	"HCD"	"MS2"	"0"	"66.6"	"100.000"	"27.3575"	"6157"	"6157"	"6144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"90.6"	""	"103.5"	""	"144.6"	""	"94.4"	"96.8"	""	"939"	"25"	"36.000"	"29.000"	"0.145759072662626"	"20"	"0.006033"	"0.07328"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEYTPTAR"	"[R].lLEYTPTAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18266"	"Glycogen synthase kinase-3 beta OS=Rattus norvegicus OX=10116 GN=Gsk3b PE=1 SV=1"	"P18266"	"Glycogen synthase kinase-3 beta OS=Rattus norvegicus OX=10116 GN=Gsk3b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"646.87354"	"1292.73979"	"1292.74117"	"-1.06"	"-0.00069"	"4/72"	"4"	"72"	"1028750.22619629"	"HCD"	"MS2"	"33.01413"	"51.2"	"100.000"	"75.7361"	"25797"	"25797"	"25777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.1"	""	"66.9"	""	"77.6"	""	"87.0"	""	"102.3"	"91.7"	""	"937"	"16"	"36.000"	"29.000"	"1.13164340093745"	"17"	"0.002875"	"0.03117"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEYTPTAR"	"[R].lLEYTPTAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P18266"	"Glycogen synthase kinase-3 beta OS=Rattus norvegicus OX=10116 GN=Gsk3b PE=1 SV=1"	"P18266"	"Glycogen synthase kinase-3 beta OS=Rattus norvegicus OX=10116 GN=Gsk3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"646.87463"	"1292.74199"	"1292.74117"	"0.64"	"0.00041"	"9/72"	"9"	"72"	"1012611.7208252"	"HCD"	"MS2"	"23.85444"	"53.6"	"100.000"	"75.6977"	"25750"	"25750"	"25735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.5"	""	"70.9"	""	"70.2"	""	"85.3"	"0.2"	"102.1"	"107.3"	""	"886"	"20"	"36.000"	"29.000"	"0.419183062485047"	"14"	"0.00329"	"0.03563"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEVESVK"	"[K].gSEVESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"646.87488"	"1292.74248"	"1292.74620"	"-2.88"	"-0.00186"	"11/64"	"11"	"64"	"1385473.29278564"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"37.3383"	"10182"	"10182"	"10162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.2"	""	"133.6"	""	"137.3"	""	"208.8"	""	"268.7"	"268.7"	""	"886"	"22"	"36.000"	"29.000"	"0.271271223534075"	"23"	"0.001615"	"0.01428"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEVESVK"	"[K].gSEVESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"646.87506"	"1292.74285"	"1292.74620"	"-2.60"	"-0.00168"	"7/64"	"7"	"64"	"1407293.24804688"	"HCD"	"MS2"	"0"	"123.3"	"100.000"	"37.2377"	"10178"	"10178"	"10158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.7"	""	"135.3"	""	"141.6"	""	"202.2"	""	"274.3"	"263.8"	""	"897"	"31"	"36.000"	"29.000"	"0.0382615401136889"	"29"	"0.0005161"	"0.006689"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEVESVK"	"[K].gSEVESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"646.87531"	"1292.74333"	"1292.74620"	"-2.22"	"-0.00143"	"7/64"	"7"	"64"	"1374565.63879395"	"HCD"	"MS2"	"0"	"122.0"	"100.000"	"37.1528"	"10144"	"10144"	"10118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.6"	""	"153.1"	""	"149.4"	""	"209.6"	""	"246.4"	"240.2"	""	"893"	"40"	"36.000"	"29.000"	"0.00443426315619946"	"24"	"0.0001991"	"0.003304"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETADAISK"	"[K].eTADAISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"646.87653"	"1292.74578"	"1292.74620"	"-0.33"	"-0.00021"	"7/68"	"7"	"68"	"8392387.56362915"	"HCD"	"MS2"	"0"	"614.5"	"100.000"	"40.8952"	"11660"	"11660"	"11640"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"847.9"	""	"662.6"	""	"747.7"	""	"1068.7"	""	"1214.8"	"1295.3"	""	"866"	"52"	"36.000"	"29.000"	"0.000300945529515949"	"27"	"0.0001686"	"0.001386"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETADAISK"	"[K].eTADAISk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"646.87659"	"1292.74590"	"1292.74620"	"-0.24"	"-0.00015"	"7/68"	"7"	"68"	"7252322.56414795"	"HCD"	"MS2"	"2.242181"	"527.5"	"100.000"	"40.9788"	"11659"	"11659"	"11642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"774.5"	""	"543.1"	""	"640.1"	""	"937.5"	""	"1031.4"	"1081.3"	""	"856"	"50"	"36.000"	"29.000"	"0.000462853731155518"	"26"	"0.0001991"	"0.002706"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLEAASEK"	"[K].sLEAASEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"431.58786"	"1292.74903"	"1292.74620"	"2.19"	"0.00094"	"7/68"	"7"	"68"	"2157219.89630127"	"HCD"	"MS2"	"52.86229"	"111.7"	"100.000"	"40.5009"	"11465"	"11465"	"11448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.5"	""	"142.5"	""	"154.5"	""	"166.4"	""	"211.4"	"218.6"	""	"804"	"20"	"36.000"	"29.000"	"0.37516822892039"	"25"	"0.003043"	"0.03279"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGTLETK"	"[K].vSGTLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"646.89429"	"1292.78130"	"1292.78259"	"-1.00"	"-0.00065"	"12/66"	"12"	"66"	"2796511.91485596"	"HCD"	"MS2"	"0"	"207.9"	"100.000"	"46.5840"	"13967"	"13967"	"13951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"245.4"	""	"310.6"	""	"291.2"	""	"306.6"	""	"367.6"	"454.8"	""	"620"	"38"	"34.000"	"27.000"	"0.00499300146905264"	""	"0.0001686"	"0.00108"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGTLETK"	"[K].vSGTLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"646.89441"	"1292.78154"	"1292.78259"	"-0.81"	"-0.00052"	"12/66"	"12"	"66"	"3093849.25994873"	"HCD"	"MS2"	"0"	"230.0"	"100.000"	"46.9798"	"14090"	"14090"	"14074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.9"	""	"339.3"	""	"334.4"	""	"376.0"	""	"406.3"	"471.1"	""	"622"	"38"	"34.000"	"27.000"	"0.00498609316504602"	""	"0.0001991"	"0.002342"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGTLETK"	"[K].vSGTLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"P81155"	"Voltage-dependent anion-selective channel protein 2 OS=Rattus norvegicus OX=10116 GN=Vdac2 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"646.89453"	"1292.78179"	"1292.78259"	"-0.62"	"-0.00040"	"9/66"	"9"	"66"	"450273.886474609"	"HCD"	"MS2"	"34.09864"	"46.2"	"100.000"	"47.3402"	"14237"	"14237"	"14212"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"62.7"	""	"71.6"	""	"68.1"	"0.1"	"81.9"	"95.1"	""	"604"	"25"	"34.000"	"27.000"	"0.101159562625664"	"26"	"0.0001991"	"0.004027"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVnDMk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"647.35968"	"1293.71208"	"1293.71246"	"-0.29"	"-0.00019"	"6/62"	"6"	"62"	"358986.201416016"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"74.8877"	"25452"	"25452"	"25430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.1"	""	"36.6"	""	"50.9"	""	"50.5"	"1.1"	"61.8"	"65.7"	""	"894"	"37"	"36.000"	"29.000"	"0.00900134739688487"	"26"	"0.0001991"	"0.005945"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMELESK"	"[K].vMELESk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"647.37805"	"1293.74883"	"1293.74884"	"-0.01"	"-0.00001"	"6/54"	"6"	"54"	"1057438.59429932"	"HCD"	"MS2"	"13.96035"	"86.7"	"100.000"	"69.2050"	"23115"	"23115"	"23092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.7"	""	"122.7"	""	"119.2"	""	"107.9"	"0.8"	"164.7"	"173.8"	""	"771"	"32"	"35.000"	"28.000"	"0.0261833000373925"	"17"	"0.001261"	"0.01005"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAQIVQK"	"[R].fAqIVqk.[G]"	"N-Term(TMT6plex); Q3(Deamidated); Q6(Deamidated); K7(TMT6plex)"	"1"	"1"	"P62078"	"Mitochondrial import inner membrane translocase subunit Tim8 B OS=Rattus norvegicus OX=10116 GN=Timm8b PE=3 SV=1"	"P62078"	"Mitochondrial import inner membrane translocase subunit Tim8 B OS=Rattus norvegicus OX=10116 GN=Timm8b PE=3 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"647.39441"	"1293.78154"	"1293.78186"	"-0.25"	"-0.00016"	"5/58"	"5"	"58"	"527882.715881348"	"HCD"	"MS2"	"24.4897"	"43.7"	"100.000"	"88.9423"	"31096"	"31096"	"31073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.2"	""	"71.1"	""	"61.2"	""	"63.0"	"2.1"	"77.9"	"71.5"	""	"509"	"32"	"34.000"	"27.000"	"0.0150552435897658"	""	"0.009781"	"0.1304"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEVIEK"	"[R].fAEVIEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"647.39484"	"1293.78240"	"1293.78186"	"0.41"	"0.00027"	"6/54"	"6"	"54"	"470111.266296387"	"HCD"	"MS2"	"6.048405"	"37.9"	"100.000"	"88.8004"	"31078"	"31078"	"31052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.7"	""	"60.4"	""	"53.6"	""	"48.2"	""	"72.7"	"72.3"	""	"509"	"30"	"34.000"	"27.000"	"0.0234254416011182"	""	"0.0001991"	"0.003215"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEVIEK"	"[R].fAEVIEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"647.39490"	"1293.78252"	"1293.78186"	"0.51"	"0.00033"	"10/54"	"10"	"54"	"350839.895263672"	"HCD"	"MS2"	"14.81669"	"29.3"	"100.000"	"89.1235"	"31208"	"31208"	"31186"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"36.4"	""	"42.6"	""	"40.0"	""	"50.0"	"58.9"	""	"508"	"21"	"34.000"	"27.000"	"0.207890056186237"	"27"	"0.001615"	"0.0143"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEVIEK"	"[R].fAEVIEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"647.39532"	"1293.78337"	"1293.78186"	"1.17"	"0.00076"	"6/54"	"6"	"54"	"309336.64630127"	"HCD"	"MS2"	"15.80759"	"25.8"	"100.000"	"89.2515"	"31220"	"31220"	"31202"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.2"	""	"34.4"	""	"37.0"	""	"41.8"	""	"45.2"	"52.3"	""	"521"	"30"	"34.000"	"27.000"	"0.0288275495726182"	""	"0.0001991"	"0.005222"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEYYASR"	"[R].nYEYYASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"647.81610"	"1294.62493"	"1294.62653"	"-1.24"	"-0.00080"	"6/78"	"6"	"78"	"1158736.67687988"	"HCD"	"MS2"	"9.289372"	"88.5"	"100.000"	"41.9771"	"12095"	"12095"	"12065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.3"	""	"114.7"	""	"156.2"	""	"107.0"	""	"156.1"	"168.9"	""	"427"	"30"	"33.000"	"26.000"	"0.0229296739534856"	"15"	"0.0001686"	"0.001872"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEYYASR"	"[R].nYEYYASR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"647.81653"	"1294.62578"	"1294.62653"	"-0.58"	"-0.00038"	"6/78"	"6"	"78"	"1159361.58843994"	"HCD"	"MS2"	"24.23901"	"87.0"	"100.000"	"42.1131"	"12116"	"12116"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.1"	""	"120.4"	""	"147.6"	""	"101.8"	""	"152.1"	"166.0"	""	"466"	"29"	"33.000"	"26.000"	"0.0303637859379385"	"17"	"0.0001991"	"0.002834"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].yNGTLNLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"647.85040"	"1294.69353"	"1294.69528"	"-1.35"	"-0.00088"	"7/86"	"7"	"86"	"2385474.50366211"	"HCD"	"MS2"	"0"	"142.9"	"100.000"	"55.6758"	"17662"	"17662"	"17646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.4"	""	"184.3"	""	"240.6"	""	"180.5"	"0.7"	"219.1"	"267.1"	""	"808"	"49"	"36.000"	"29.000"	"0.000533803436211377"	"24"	"0"	"0.000181"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].yNGTLNLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"647.85071"	"1294.69414"	"1294.69528"	"-0.88"	"-0.00057"	"7/86"	"7"	"86"	"2407970.12365723"	"HCD"	"MS2"	"0"	"153.5"	"100.000"	"56.0073"	"17762"	"17762"	"17750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"279.9"	""	"200.3"	""	"237.9"	""	"222.7"	"5.8"	"221.3"	"282.5"	""	"803"	"56"	"36.000"	"29.000"	"0.000105362374516885"	"24"	"0"	"0.0001042"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESPSGTMK"	"[R].eSPSGTMk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"647.85596"	"1294.70464"	"1294.70771"	"-2.37"	"-0.00154"	"7/66"	"7"	"66"	"1190374.27972412"	"HCD"	"MS2"	"24.14734"	"122.8"	"100.000"	"31.9718"	"8047"	"8047"	"8032"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.7"	""	"154.4"	""	"167.8"	""	"176.6"	""	"242.5"	"228.3"	""	"842"	"15"	"36.000"	"29.000"	"1.35295108676757"	"25"	"0.001049"	"0.008646"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESPSGTMK"	"[R].eSPSGTMk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"647.85724"	"1294.70720"	"1294.70771"	"-0.39"	"-0.00025"	"7/66"	"7"	"66"	"1872078.68835449"	"HCD"	"MS2"	"0"	"182.8"	"100.000"	"32.0340"	"8036"	"8036"	"8022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.4"	""	"247.3"	""	"288.1"	""	"235.8"	""	"331.8"	"333.3"	""	"849"	"27"	"36.000"	"29.000"	"0.0856796521382823"	""	"0.0001991"	"0.0032"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"647.86255"	"1294.71782"	"1294.72043"	"-2.02"	"-0.00131"	"7/74"	"7"	"74"	"2611987.8416748"	"HCD"	"MS2"	"3.572072"	"121.0"	"100.000"	"78.7574"	"27016"	"27016"	"26999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.4"	"2.5"	"148.4"	""	"190.5"	""	"179.5"	""	"209.9"	"269.1"	""	"816"	"32"	"36.000"	"29.000"	"0.0251570760759485"	"17"	"9.9E-05"	"0.0004304"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSDPTYR"	"[R].tLLSDPTYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"647.86255"	"1294.71782"	"1294.72043"	"-2.02"	"-0.00131"	"7/76"	"7"	"76"	"7010024.93395996"	"HCD"	"MS2"	"1.706021"	"315.6"	"100.000"	"63.7145"	"20922"	"20922"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"461.6"	""	"389.8"	""	"430.6"	""	"543.9"	"0.1"	"568.2"	"595.5"	""	"816"	"39"	"36.000"	"29.000"	"0.00498494261347268"	""	"9.9E-05"	"0.000755"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSDPTYR"	"[R].tLLSDPTYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"647.86279"	"1294.71831"	"1294.72043"	"-1.64"	"-0.00106"	"7/76"	"7"	"76"	"7368121.74304199"	"HCD"	"MS2"	"1.470123"	"171.8"	"100.000"	"63.7317"	"20896"	"20896"	"20882"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.4"	""	"223.5"	""	"240.6"	""	"287.9"	"2.2"	"307.8"	"313.9"	""	"838"	"39"	"36.000"	"29.000"	"0.00516670925122913"	""	"9.9E-05"	"0.0006683"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"647.86285"	"1294.71843"	"1294.72043"	"-1.55"	"-0.00100"	"7/74"	"7"	"74"	"2735345.93560791"	"HCD"	"MS2"	"1.582081"	"122.6"	"100.000"	"78.6559"	"26947"	"26947"	"26929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.4"	""	"163.7"	""	"195.7"	""	"181.9"	""	"217.2"	"258.6"	""	"838"	"30"	"36.000"	"29.000"	"0.040106431587254"	"16"	"9.9E-05"	"0.0009047"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALFEEISR"	"[R].tALFEEISR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"Q9Z1M9"	"Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus OX=10116 GN=Smc1a PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"647.86316"	"1294.71904"	"1294.72043"	"-1.07"	"-0.00070"	"4/78"	"4"	"78"	"378055.278381348"	"HCD"	"MS2"	"36.40261"	"21.8"	"100.000"	"93.9601"	"33153"	"33153"	"33126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"22.6"	""	"23.4"	""	"33.7"	"1.4"	"46.9"	"50.6"	""	"837"	"14"	"36.000"	"29.000"	"1.77294581291733"	"17"	"0.0001991"	"0.004997"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"647.86359"	"1294.71990"	"1294.72043"	"-0.41"	"-0.00027"	"6/74"	"6"	"74"	"680239.537597656"	"HCD"	"MS2"	"3.056681"	"38.1"	"100.000"	"78.9695"	"27075"	"27075"	"27056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"48.6"	""	"54.3"	""	"61.8"	""	"70.3"	"84.6"	""	"841"	"44"	"36.000"	"29.000"	"0.00182711549264146"	"18"	"0"	"5.207E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSDPTYR"	"[R].tLLSDPTYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"647.86359"	"1294.71990"	"1294.72043"	"-0.41"	"-0.00027"	"11/76"	"11"	"76"	"3658627.65148926"	"HCD"	"MS2"	"17.37032"	"166.7"	"100.000"	"63.4446"	"20780"	"20780"	"20763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.8"	""	"228.3"	""	"236.0"	""	"248.7"	"3.4"	"266.4"	"338.6"	""	"841"	"30"	"36.000"	"29.000"	"0.0464265059668822"	"29"	"0.0001991"	"0.002408"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAEIATYR"	"[K].lEAEIATYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"647.86365"	"1294.72002"	"1294.72043"	"-0.32"	"-0.00021"	"7/74"	"7"	"74"	"846795.036987305"	"HCD"	"MS2"	"0"	"46.0"	"100.000"	"79.0615"	"27139"	"27139"	"27118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"63.1"	""	"71.6"	""	"71.7"	""	"75.6"	"106.8"	""	"841"	"42"	"36.000"	"29.000"	"0.00256310265289491"	"18"	"0"	"0.000146"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLSDPTYR"	"[R].tLLSDPTYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"647.86365"	"1294.72002"	"1294.72043"	"-0.32"	"-0.00021"	"11/76"	"11"	"76"	"3940858.38946533"	"HCD"	"MS2"	"15.20351"	"176.9"	"100.000"	"63.4226"	"20802"	"20802"	"20782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.1"	""	"222.8"	""	"259.0"	""	"269.4"	"5.3"	"278.8"	"359.3"	""	"841"	"30"	"36.000"	"29.000"	"0.0448503668977323"	""	"9.9E-05"	"0.0007199"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPYPGSK"	"[R].tSPYPGSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIG0"	"ADP-ribose pyrophosphatase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nudt9 PE=2 SV=1"	"Q5XIG0"	"ADP-ribose pyrophosphatase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nudt9 PE=2 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"647.87549"	"1294.74370"	"1294.74072"	"2.30"	"0.00149"	"7/68"	"7"	"68"	"587991.296142578"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"37.6665"	"10315"	"10315"	"10300"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.8"	""	"59.5"	""	"73.5"	""	"68.6"	"0.1"	"105.4"	"90.0"	""	"673"	"36"	"35.000"	"28.000"	"0.00895333982622299"	"22"	"0.001261"	"0.009735"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVEAFAK"	"[K].gDVEAFAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"647.87573"	"1294.74419"	"1294.74072"	"2.68"	"0.00173"	"6/60"	"6"	"60"	"2011097.84918213"	"HCD"	"MS2"	"11.50373"	"152.3"	"100.000"	"64.0009"	"21037"	"21037"	"21019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"206.9"	""	"169.8"	""	"179.2"	""	"240.1"	"6.0"	"326.7"	"318.3"	""	"673"	"25"	"35.000"	"28.000"	"0.0970476600802103"	"22"	"0.001103"	"0.009072"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVEAFAK"	"[K].gDVEAFAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"3"	"647.87604"	"1294.74480"	"1294.74072"	"3.15"	"0.00204"	"6/60"	"6"	"60"	"2446803.3737793"	"HCD"	"MS2"	"72.01423"	"161.4"	"100.000"	"64.0710"	"21033"	"21033"	"21014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.3"	""	"189.4"	""	"204.1"	""	"268.0"	""	"306.4"	"323.3"	""	"648"	"0"	"35.000"	"28.000"	"29.9602208355984"	"13"	"0.008718"	"0.1103"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTVLSEAHL"	"[K].vPTVLSEAHL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.88190"	"1294.75652"	"1294.75682"	"-0.23"	"-0.00015"	"7/82"	"7"	"82"	"409486.164489746"	"HCD"	"MS2"	"17.50338"	"13.6"	"100.000"	"104.9395"	"37552"	"37552"	"37537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"6.8"	""	"27.5"	""	"25.3"	""	"27.2"	"31.3"	""	"601"	"51"	"34.000"	"27.000"	"0.000215697184527044"	"16"	"0.0001991"	"0.004238"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTVLSEAHL"	"[K].vPTVLSEAHL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.88196"	"1294.75664"	"1294.75682"	"-0.14"	"-0.00009"	"7/82"	"7"	"82"	"276589.786132813"	"HCD"	"MS2"	"15.05288"	"10.2"	"100.000"	"104.9085"	"37560"	"37560"	"37551"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"11.8"	""	"17.1"	""	"15.2"	""	"21.2"	"23.4"	""	"601"	"49"	"34.000"	"27.000"	"0.000394316069655271"	"16"	"9.9E-05"	"0.0005281"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTVLSEAHL"	"[K].vPTVLSEAHL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.88251"	"1294.75774"	"1294.75682"	"0.71"	"0.00046"	"7/82"	"7"	"82"	"312775.747314453"	"HCD"	"MS2"	"19.25675"	"11.3"	"100.000"	"104.6405"	"37435"	"37435"	"37417"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"14.7"	""	"18.1"	""	"22.6"	""	"18.8"	"23.3"	""	"565"	"49"	"34.000"	"27.000"	"0.00032137970824512"	"16"	"9.9E-05"	"0.000635"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPTVLSEAHL"	"[K].vPTVLSEAHL.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"P60815"	"Feline leukemia virus subgroup C receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Flvcr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.88257"	"1294.75786"	"1294.75682"	"0.80"	"0.00052"	"7/82"	"7"	"82"	"438540.315856934"	"HCD"	"MS2"	"29.28174"	"15.6"	"100.000"	"105.2051"	"37677"	"37677"	"37657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"14.0"	""	"25.3"	""	"25.5"	"2.0"	"33.2"	"36.4"	""	"565"	"52"	"34.000"	"27.000"	"0.000188807156713134"	"16"	"0.0001991"	"0.00497"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.26001"	"1294.76548"	"1294.76805"	"-1.99"	"-0.00086"	"12/80"	"12"	"80"	"700011.721801758"	"HCD"	"MS2"	"9.840152"	"19.1"	"100.000"	"81.6498"	"28191"	"28191"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.5"	""	"20.6"	""	"23.8"	""	"29.9"	""	"40.7"	"39.0"	""	"565"	"48"	"34.000"	"27.000"	"0.000455007391937862"	"15"	"0"	"5.424E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.26038"	"1294.76657"	"1294.76805"	"-1.14"	"-0.00049"	"12/80"	"12"	"80"	"783097.283691406"	"HCD"	"MS2"	"5.633638"	"22.5"	"100.000"	"81.5048"	"28105"	"28105"	"28081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.4"	""	"30.6"	""	"27.8"	""	"35.1"	""	"41.2"	"45.4"	""	"552"	"42"	"34.000"	"27.000"	"0.00193601662363912"	"15"	"0"	"0.0001262"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"647.88708"	"1294.76689"	"1294.76805"	"-0.89"	"-0.00058"	"10/80"	"10"	"80"	"1204372.71789551"	"HCD"	"MS2"	"7.600288"	"52.8"	"100.000"	"81.8623"	"28249"	"28249"	"28231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.0"	""	"55.6"	""	"71.5"	""	"87.9"	""	"100.0"	"110.4"	""	"544"	"51"	"34.000"	"27.000"	"0.000206333100407938"	"18"	"0"	"8.347E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.26059"	"1294.76722"	"1294.76805"	"-0.65"	"-0.00028"	"9/80"	"9"	"80"	"286334.68182373"	"HCD"	"MS2"	"67.89091"	"11.1"	"100.000"	"81.9589"	"28317"	"28317"	"28291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"15.9"	""	"17.3"	""	"15.7"	""	"23.6"	"18.9"	""	"544"	"12"	"34.000"	"27.000"	"1.70046972434987"	"13"	"0.0007633"	"0.007443"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"647.88757"	"1294.76787"	"1294.76805"	"-0.14"	"-0.00009"	"9/80"	"9"	"80"	"2840149.81500244"	"HCD"	"MS2"	"0"	"107.8"	"100.000"	"81.5486"	"28122"	"28122"	"28106"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.1"	""	"114.8"	""	"132.0"	""	"189.5"	"0.3"	"212.5"	"208.2"	""	"561"	"62"	"34.000"	"27.000"	"1.6785445241442E-05"	"21"	"0"	"2.51E-07"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.88770"	"1294.76811"	"1294.76805"	"0.05"	"0.00003"	"10/80"	"10"	"80"	"359163.847961426"	"HCD"	"MS2"	"34.40754"	"22.1"	"100.000"	"82.1692"	"28402"	"28402"	"28382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"28.7"	""	"27.4"	""	"34.5"	""	"39.0"	"49.4"	""	"561"	"8"	"34.000"	"27.000"	"4.11086169388133"	"13"	"0.002525"	"0.02512"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"647.88782"	"1294.76836"	"1294.76805"	"0.24"	"0.00015"	"9/80"	"9"	"80"	"1613302.67315674"	"HCD"	"MS2"	"0"	"65.6"	"100.000"	"81.8576"	"28276"	"28276"	"28259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.2"	""	"73.2"	""	"79.3"	""	"123.2"	""	"117.7"	"134.5"	""	"556"	"60"	"34.000"	"27.000"	"2.69801770894246E-05"	"20"	"0"	"7.74E-07"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"647.88788"	"1294.76848"	"1294.76805"	"0.33"	"0.00021"	"9/80"	"9"	"80"	"931071.453186035"	"HCD"	"MS2"	"13.03371"	"43.4"	"100.000"	"81.2579"	"28032"	"28032"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.8"	""	"47.4"	""	"52.5"	""	"76.4"	"0.4"	"84.7"	"88.5"	""	"556"	"53"	"34.000"	"27.000"	"0.00013741837098234"	"19"	"0"	"1.023E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"647.88788"	"1294.76848"	"1294.76805"	"0.33"	"0.00021"	"9/80"	"9"	"80"	"2977638.83239746"	"HCD"	"MS2"	"0"	"112.2"	"100.000"	"81.5599"	"28154"	"28154"	"28140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.8"	""	"125.2"	""	"139.2"	""	"198.6"	""	"216.4"	"225.3"	""	"556"	"62"	"34.000"	"27.000"	"1.69451257432767E-05"	"20"	"0"	"1.973E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGGIDVPVPR"	"[R].vGGGIDVPVPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"647.88794"	"1294.76860"	"1294.76805"	"0.43"	"0.00028"	"8/80"	"8"	"80"	"1326404.92144775"	"HCD"	"MS2"	"7.619055"	"57.3"	"100.000"	"81.2466"	"28000"	"28000"	"27982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.3"	""	"65.4"	""	"66.7"	""	"102.5"	""	"104.5"	"121.3"	""	"556"	"58"	"34.000"	"27.000"	"4.7867946384611E-05"	"19"	"0"	"7.371E-07"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYNGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.34265"	"1295.67803"	"1295.67930"	"-0.98"	"-0.00063"	"7/84"	"7"	"84"	"2804163.54260254"	"HCD"	"MS2"	"34.18865"	"176.6"	"100.000"	"44.6435"	"13181"	"13181"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.5"	""	"220.6"	""	"238.5"	""	"307.2"	"4.8"	"292.3"	"321.8"	""	"707"	"32"	"35.000"	"28.000"	"0.021846879744893"	"15"	"0.0001686"	"0.001586"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYNGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"648.34265"	"1295.67803"	"1295.67930"	"-0.98"	"-0.00063"	"7/84"	"7"	"84"	"2877315.4630127"	"HCD"	"MS2"	"24.37661"	"182.1"	"100.000"	"44.8838"	"13245"	"13245"	"13226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.1"	""	"238.0"	""	"255.4"	""	"309.4"	"12.3"	"304.5"	"313.4"	""	"707"	"33"	"35.000"	"28.000"	"0.016009929449593"	"16"	"0"	"0.0003803"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"648.34271"	"1295.67815"	"1295.67930"	"-0.89"	"-0.00057"	"8/86"	"8"	"86"	"2733782.61517334"	"HCD"	"MS2"	"17.70295"	"164.2"	"100.000"	"64.0946"	"21075"	"21075"	"21056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.1"	""	"182.3"	""	"202.3"	""	"272.1"	""	"304.0"	"338.4"	""	"707"	"29"	"35.000"	"28.000"	"0.046600375707969"	"19"	"9.9E-05"	"0.000736"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"648.34290"	"1295.67851"	"1295.67930"	"-0.60"	"-0.00039"	"7/86"	"7"	"86"	"2628063.45806885"	"HCD"	"MS2"	"14.74972"	"154.2"	"100.000"	"64.1397"	"21061"	"21061"	"21049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.7"	""	"173.6"	""	"198.1"	""	"234.2"	""	"272.6"	"324.7"	""	"732"	"31"	"35.000"	"28.000"	"0.0286075776479328"	"20"	"9.9E-05"	"0.0005455"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"648.34332"	"1295.67937"	"1295.67930"	"0.06"	"0.00004"	"8/86"	"8"	"86"	"1384680.02526855"	"HCD"	"MS2"	"19.27765"	"83.7"	"100.000"	"64.4332"	"21178"	"21178"	"21168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.6"	""	"88.7"	""	"114.6"	""	"122.0"	""	"153.8"	"184.4"	""	"768"	"36"	"35.000"	"28.000"	"0.00951330070131181"	"19"	"0"	"0.0001801"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"648.34338"	"1295.67949"	"1295.67930"	"0.15"	"0.00010"	"8/86"	"8"	"86"	"2679937.02233887"	"HCD"	"MS2"	"47.97482"	"149.2"	"100.000"	"63.3072"	"20755"	"20755"	"20734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"226.4"	""	"182.9"	""	"214.4"	""	"229.2"	""	"251.1"	"312.1"	""	"768"	"22"	"35.000"	"28.000"	"0.245093178697171"	"22"	"0.0001686"	"0.001928"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"648.34357"	"1295.67986"	"1295.67930"	"0.43"	"0.00028"	"8/86"	"8"	"86"	"1165424.38757324"	"HCD"	"MS2"	"25.93699"	"81.4"	"100.000"	"64.4365"	"21213"	"21213"	"21195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.4"	""	"85.9"	""	"117.8"	""	"119.0"	"0.0"	"149.1"	"173.1"	""	"763"	"23"	"35.000"	"28.000"	"0.186850619589062"	"18"	"0.0001991"	"0.003958"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNGTLNLDR"	"[K].ynGTLNLDR.[A]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"648.34393"	"1295.68059"	"1295.67930"	"1.00"	"0.00065"	"8/86"	"8"	"86"	"3077152.26672363"	"HCD"	"MS2"	"43.93516"	"174.5"	"100.000"	"63.3708"	"20749"	"20749"	"20731"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.0"	"3.3"	"222.5"	""	"233.8"	""	"270.0"	""	"297.9"	"374.9"	""	"752"	"15"	"35.000"	"28.000"	"1.32796871841776"	"25"	"0.000885"	"0.007738"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"648.36694"	"1295.72661"	"1295.72811"	"-1.16"	"-0.00075"	"6/54"	"6"	"54"	"904026.046447754"	"HCD"	"MS2"	"0"	"64.9"	"100.000"	"56.5948"	"18030"	"18030"	"18011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.4"	""	"77.6"	""	"90.0"	""	"101.8"	""	"130.9"	"130.0"	""	"782"	"18"	"35.000"	"28.000"	"0.565166950361658"	"23"	"0.008893"	"0.1136"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"648.36719"	"1295.72710"	"1295.72811"	"-0.78"	"-0.00051"	"10/54"	"10"	"54"	"985105.251403809"	"HCD"	"MS2"	"10.79348"	"74.5"	"100.000"	"57.1764"	"18231"	"18231"	"18211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.4"	""	"102.3"	""	"98.3"	""	"99.2"	"0.1"	"145.8"	"154.4"	""	"783"	"22"	"35.000"	"28.000"	"0.24307022690107"	"24"	"0.009781"	"0.1304"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"648.36719"	"1295.72710"	"1295.72811"	"-0.78"	"-0.00051"	"10/54"	"10"	"54"	"8349531.39892578"	"HCD"	"MS2"	"0"	"451.2"	"100.000"	"48.7707"	"14820"	"14820"	"14803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"440.5"	""	"410.8"	""	"451.2"	""	"1113.3"	""	"928.6"	"949.2"	""	"783"	"22"	"35.000"	"28.000"	"0.269607374018784"	"23"	"0.008135"	"0.1031"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"648.36731"	"1295.72734"	"1295.72811"	"-0.59"	"-0.00038"	"10/54"	"10"	"54"	"5599488.84521484"	"HCD"	"MS2"	"13.55141"	"329.9"	"100.000"	"48.1815"	"14618"	"14618"	"14605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"354.0"	""	"352.5"	""	"326.3"	""	"814.0"	""	"646.2"	"642.6"	""	"757"	"21"	"35.000"	"28.000"	"0.306948760397679"	"24"	"0.005549"	"0.07033"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"648.36731"	"1295.72734"	"1295.72811"	"-0.59"	"-0.00038"	"10/54"	"10"	"54"	"7303720.96826172"	"HCD"	"MS2"	"0"	"397.0"	"100.000"	"48.4771"	"14736"	"14736"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"391.1"	""	"363.2"	""	"392.0"	""	"993.7"	""	"818.8"	"817.7"	""	"757"	"23"	"35.000"	"28.000"	"0.2027990348688"	"24"	"0.006814"	"0.0846"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVDMLK"	"[R].sEVDmLk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"648.36829"	"1295.72930"	"1295.72811"	"0.92"	"0.00059"	"10/54"	"10"	"54"	"5676554.70782471"	"HCD"	"MS2"	"17.86971"	"335.7"	"100.000"	"48.4924"	"14706"	"14706"	"14694"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"357.5"	""	"343.3"	""	"369.1"	""	"806.3"	""	"668.8"	"645.5"	""	"736"	"21"	"35.000"	"28.000"	"0.272174741221431"	"23"	"0.005266"	"0.06797"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSLPTPPTR"	"[R].tPSLPTPPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"432.58847"	"1295.75086"	"1295.75207"	"-0.93"	"-0.00040"	"8/88"	"8"	"88"	"756502.104736328"	"HCD"	"MS2"	"67.57546"	"37.1"	"100.000"	"58.4064"	"18733"	"18733"	"18702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"50.2"	""	"48.9"	""	"58.0"	"0.6"	"74.3"	"71.8"	""	"586"	"12"	"34.000"	"27.000"	"1.80246823703991"	"16"	"0.00511"	"0.06554"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPSLPTPPTR"	"[R].tPSLPTPPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"648.37952"	"1295.75176"	"1295.75207"	"-0.24"	"-0.00016"	"6/88"	"6"	"88"	"1592297.31799316"	"HCD"	"MS2"	"54.44515"	"86.4"	"100.000"	"57.9875"	"18597"	"18597"	"18574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.6"	""	"106.6"	""	"112.6"	""	"156.2"	""	"172.2"	"168.0"	""	"582"	"8"	"34.000"	"27.000"	"4.89658151771506"	"17"	"0.003317"	"0.03649"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDEFSK"	"[K].vLDEFSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.38428"	"1295.76128"	"1295.76112"	"0.12"	"0.00008"	"6/54"	"6"	"54"	"1075063.11065674"	"HCD"	"MS2"	"29.04193"	"74.1"	"100.000"	"90.8613"	"31904"	"31904"	"31887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.6"	""	"89.7"	""	"105.9"	""	"147.5"	"1.1"	"121.9"	"126.4"	""	"491"	"18"	"33.000"	"26.000"	"0.347577372979464"	"14"	"0.002588"	"0.02713"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLDIYK"	"[K].eGLDIYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"648.38428"	"1295.76128"	"1295.76112"	"0.12"	"0.00008"	"6/54"	"6"	"54"	"1708258.73187256"	"HCD"	"MS2"	"20.03166"	"138.2"	"100.000"	"76.3492"	"26046"	"26046"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.9"	""	"167.2"	""	"145.7"	""	"264.0"	""	"282.8"	"284.6"	""	"491"	"32"	"33.000"	"26.000"	"0.0168675302023494"	""	"0.001103"	"0.00903"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLDIYK"	"[K].eGLDIYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"O55012"	"Phosphatidylinositol-binding clathrin assembly protein OS=Rattus norvegicus OX=10116 GN=Picalm PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"648.38434"	"1295.76140"	"1295.76112"	"0.21"	"0.00014"	"10/54"	"10"	"54"	"1668471.02154541"	"HCD"	"MS2"	"15.28998"	"135.0"	"100.000"	"76.2810"	"25987"	"25987"	"25968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.3"	""	"163.9"	""	"149.3"	""	"240.9"	""	"280.8"	"286.1"	""	"491"	"25"	"33.000"	"26.000"	"0.0772772211111873"	"25"	"0.001615"	"0.01386"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALIHDGLAR"	"[K].tALIHDGLAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"432.59210"	"1295.76175"	"1295.76330"	"-1.19"	"-0.00052"	"7/82"	"7"	"82"	"11975619.2040405"	"HCD"	"MS2"	"4.441645"	"150.3"	"100.000"	"44.8036"	"13212"	"13212"	"13195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.9"	""	"175.9"	""	"194.8"	""	"273.6"	"0.5"	"298.9"	"295.1"	""	"485"	"51"	"33.000"	"26.000"	"0.000200314202772466"	""	"0"	"0.0001501"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDEFSK"	"[K].vLDEFSk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.38452"	"1295.76177"	"1295.76112"	"0.50"	"0.00032"	"6/54"	"6"	"54"	"1096728.14935303"	"HCD"	"MS2"	"28.99186"	"68.2"	"100.000"	"90.9524"	"31903"	"31903"	"31883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.9"	""	"87.4"	""	"92.5"	""	"128.8"	""	"116.7"	"126.2"	""	"485"	"18"	"33.000"	"26.000"	"0.42727919125482"	"14"	"0.003001"	"0.03236"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALIHDGLAR"	"[K].tALIHDGLAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"0"	"3"	"3"	"0.7959"	"0.0000"	"1"	"1"	"1"	"432.59238"	"1295.76258"	"1295.76330"	"-0.56"	"-0.00024"	"7/82"	"7"	"82"	"11120419.9185791"	"HCD"	"MS2"	"17.67341"	"175.2"	"100.000"	"44.4947"	"13122"	"13122"	"13105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"206.8"	""	"182.9"	""	"208.0"	""	"328.7"	"0.8"	"374.1"	"363.1"	""	"489"	"49"	"33.000"	"26.000"	"0.00033672771514457"	"26"	"9.9E-05"	"0.0006283"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASHVAPK"	"[K].qASHVAPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"432.59894"	"1295.78226"	"1295.78359"	"-1.03"	"-0.00044"	"6/70"	"6"	"70"	"34158210.3684082"	"HCD"	"MS2"	"17.94255"	"561.7"	"45.165"	"21.1449"	"3770"	"3770"	"3751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"764.8"	""	"731.8"	""	"587.8"	""	"1015.6"	""	"1182.4"	"1051.7"	""	"360"	"30"	"32.000"	"25.000"	"0.0195106844523817"	"20"	"0.0001991"	"0.004224"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASHVAPK"	"[K].qASHVAPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"648.39478"	"1295.78227"	"1295.78359"	"-1.02"	"-0.00066"	"11/70"	"11"	"70"	"1998723.17492676"	"HCD"	"MS2"	"11.81083"	"120.3"	"100.000"	"21.1265"	"3763"	"3763"	"3739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.4"	""	"163.1"	""	"107.4"	""	"226.7"	""	"239.2"	"227.2"	""	"360"	"39"	"32.000"	"25.000"	"0.00210509890383577"	""	"0.0001686"	"0.001291"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASHVAPK"	"[K].qASHVAPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"432.59909"	"1295.78272"	"1295.78359"	"-0.67"	"-0.00029"	"6/70"	"6"	"70"	"35135975.2662354"	"HCD"	"MS2"	"14.65298"	"496.8"	"39.267"	"21.1709"	"3744"	"3744"	"3734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"661.9"	""	"666.5"	""	"487.8"	""	"894.5"	""	"1049.8"	"961.8"	""	"359"	"30"	"32.000"	"25.000"	"0.019411739425798"	"18"	"0.0001991"	"0.003375"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QASHVAPK"	"[K].qASHVAPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"648.39569"	"1295.78411"	"1295.78359"	"0.40"	"0.00026"	"7/70"	"7"	"70"	"1612256.51074219"	"HCD"	"MS2"	"0"	"97.3"	"100.000"	"21.1661"	"3742"	"3742"	"3720"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.4"	""	"138.7"	""	"101.6"	""	"178.0"	""	"218.4"	"169.1"	""	"369"	"28"	"32.000"	"25.000"	"0.0304085961236456"	"24"	"0.0001991"	"0.002177"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIDYNGER"	"[R].tVIDYnGER.[T]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"648.83624"	"1296.66521"	"1296.66331"	"1.46"	"0.00095"	"6/84"	"6"	"84"	"1075064.54882813"	"HCD"	"MS2"	"49.32813"	"71.2"	"100.000"	"47.5954"	"14341"	"14341"	"14318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.2"	""	"94.6"	""	"86.7"	""	"116.7"	""	"134.4"	"131.3"	""	"650"	"32"	"35.000"	"28.000"	"0.0212756756571864"	"19"	"0.0001991"	"0.003546"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"648.84448"	"1296.68169"	"1296.68194"	"-0.19"	"-0.00013"	"7/64"	"7"	"64"	"1427150.18829346"	"HCD"	"MS2"	"43.35445"	"81.0"	"100.000"	"90.9821"	"31915"	"31915"	"31899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.9"	""	"100.6"	""	"91.1"	""	"180.9"	""	"157.0"	"139.4"	""	"686"	"13"	"35.000"	"28.000"	"1.77948413352633"	"20"	"0.002711"	"0.02858"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"648.84460"	"1296.68193"	"1296.68194"	"-0.01"	"0.00000"	"7/64"	"7"	"64"	"1282282.76123047"	"HCD"	"MS2"	"17.31598"	"55.4"	"100.000"	"91.3007"	"32044"	"32044"	"32026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.5"	""	"56.5"	""	"57.2"	""	"122.1"	""	"112.8"	"109.1"	""	"686"	"22"	"35.000"	"28.000"	"0.227663873147854"	"17"	"0.001951"	"0.01635"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDELQLFR"	"[K].mDELQLFR.[G]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"648.84460"	"1296.68193"	"1296.68194"	"-0.01"	"0.00000"	"11/64"	"11"	"64"	"1355568.29266357"	"HCD"	"MS2"	"13.37394"	"58.9"	"100.000"	"91.1798"	"32032"	"32032"	"32019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.6"	""	"63.2"	""	"66.5"	""	"135.6"	""	"112.0"	"115.0"	""	"686"	"16"	"35.000"	"28.000"	"0.815256218312332"	"17"	"0.004234"	"0.0482"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"432.90170"	"1296.69056"	"1296.69317"	"-2.02"	"-0.00087"	"6/74"	"6"	"74"	"1523880.35516357"	"HCD"	"MS2"	"5.369585"	"34.7"	"100.000"	"52.1713"	"16199"	"16199"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.5"	""	"47.8"	""	"49.1"	""	"45.5"	"0.9"	"62.8"	"71.1"	""	"658"	"42"	"35.000"	"28.000"	"0.00223973119010241"	"25"	"9.9E-05"	"0.0004024"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"432.90213"	"1296.69184"	"1296.69317"	"-1.03"	"-0.00044"	"8/74"	"8"	"74"	"1011912.1819458"	"HCD"	"MS2"	"54.43948"	"34.2"	"100.000"	"51.2445"	"15861"	"15861"	"15839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"45.6"	""	"44.8"	""	"51.4"	"0.4"	"72.3"	"66.5"	""	"659"	"31"	"35.000"	"28.000"	"0.027217950438568"	"22"	"0.0001686"	"0.001251"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"432.90213"	"1296.69184"	"1296.69317"	"-1.03"	"-0.00044"	"6/74"	"6"	"74"	"3073374.9442749"	"HCD"	"MS2"	"9.494458"	"56.5"	"100.000"	"51.8599"	"16072"	"16072"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.7"	""	"87.6"	""	"82.2"	""	"73.2"	"0.8"	"108.8"	"104.5"	""	"659"	"41"	"35.000"	"28.000"	"0.00235969253665151"	"26"	"9.9E-05"	"0.000466"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"432.90216"	"1296.69193"	"1296.69317"	"-0.96"	"-0.00041"	"8/74"	"8"	"74"	"1126108.27941895"	"HCD"	"MS2"	"27.41661"	"36.5"	"100.000"	"51.5848"	"15962"	"15962"	"15942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.9"	""	"59.9"	""	"57.3"	""	"46.4"	""	"69.0"	"65.2"	""	"659"	"26"	"35.000"	"28.000"	"0.0870673685537581"	"18"	"0.0001686"	"0.001173"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"432.90240"	"1296.69266"	"1296.69317"	"-0.39"	"-0.00017"	"8/74"	"8"	"74"	"935619.254516602"	"HCD"	"MS2"	"16.82013"	"32.6"	"100.000"	"51.9224"	"16132"	"16132"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.3"	""	"54.6"	""	"39.2"	""	"56.0"	"0.4"	"54.0"	"66.5"	""	"671"	"23"	"35.000"	"28.000"	"0.154416080436545"	"22"	"0.0001991"	"0.00238"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLMPHDLAR"	"[K].dLMPHDLAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"432.90244"	"1296.69275"	"1296.69317"	"-0.32"	"-0.00014"	"6/74"	"6"	"74"	"3150873.34783936"	"HCD"	"MS2"	"7.220828"	"56.1"	"100.000"	"51.5678"	"15988"	"15988"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.5"	""	"83.0"	""	"81.2"	""	"68.5"	""	"107.5"	"107.9"	""	"671"	"38"	"35.000"	"28.000"	"0.00565838540017923"	"25"	"9.9E-05"	"0.0004372"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTIVTSYNR"	"[K].nTIVTSYNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"648.85803"	"1296.70879"	"1296.71093"	"-1.65"	"-0.00107"	"6/88"	"6"	"88"	"3509041.61700439"	"HCD"	"MS2"	"8.326857"	"217.6"	"100.000"	"39.5184"	"11067"	"11067"	"11054"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"371.8"	""	"303.8"	""	"314.3"	""	"329.4"	""	"356.7"	"384.8"	""	"684"	"43"	"35.000"	"28.000"	"0.00188376232170648"	"17"	"0"	"0.0003121"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTIVTSYNR"	"[K].nTIVTSYNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"648.85809"	"1296.70891"	"1296.71093"	"-1.56"	"-0.00101"	"8/88"	"8"	"88"	"1908989.21594238"	"HCD"	"MS2"	"0"	"119.3"	"100.000"	"39.1317"	"10948"	"10948"	"10931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.3"	""	"197.6"	""	"170.2"	""	"154.2"	"2.4"	"173.2"	"189.7"	""	"684"	"34"	"35.000"	"28.000"	"0.0144220204172575"	"18"	"9.9E-05"	"0.0007041"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTIVTSYNR"	"[K].nTIVTSYNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"648.85815"	"1296.70903"	"1296.71093"	"-1.46"	"-0.00095"	"6/88"	"6"	"88"	"2850050.00793457"	"HCD"	"MS2"	"100"	"176.5"	"100.000"	"39.2418"	"10958"	"10958"	"10932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.6"	""	"271.0"	""	"276.2"	""	"236.5"	""	"295.1"	"299.1"	""	"684"	"28"	"35.000"	"28.000"	"0.0567578722343645"	"19"	"9.9E-05"	"0.000516"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTIVTSYNR"	"[K].nTIVTSYNR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"648.85834"	"1296.70940"	"1296.71093"	"-1.18"	"-0.00077"	"6/88"	"6"	"88"	"3924930.57403564"	"HCD"	"MS2"	"4.168398"	"237.1"	"100.000"	"39.4342"	"11069"	"11069"	"11054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"423.3"	""	"333.1"	""	"356.0"	""	"334.6"	""	"397.8"	"398.2"	""	"674"	"30"	"35.000"	"28.000"	"0.0339335972403058"	"17"	"0.0001686"	"0.001322"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENYPLYIR"	"[K].eNYPLYIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"648.86121"	"1296.71514"	"1296.71495"	"0.14"	"0.00009"	"6/68"	"6"	"68"	"609337.254638672"	"HCD"	"MS2"	"43.13364"	"45.8"	"100.000"	"73.1352"	"24710"	"24710"	"24682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"58.5"	""	"62.1"	""	"71.5"	"0.3"	"90.0"	"92.0"	""	"649"	"29"	"35.000"	"28.000"	"0.0423852453198783"	"20"	"0.0005161"	"0.006557"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGFETK"	"[R].eQGFETk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"3"	"648.86304"	"1296.71880"	"1296.71999"	"-0.92"	"-0.00060"	"6/68"	"6"	"68"	"2918809.76574707"	"HCD"	"MS2"	"6.548519"	"240.2"	"100.000"	"40.7191"	"11553"	"11553"	"11534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"456.8"	""	"300.4"	""	"320.9"	""	"378.6"	""	"415.6"	"402.3"	""	"641"	"38"	"35.000"	"28.000"	"0.00499836577156039"	"28"	"0.001348"	"0.01081"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDK"	"[R].nISFnDk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"648.86316"	"1296.71904"	"1296.71999"	"-0.73"	"-0.00047"	"6/66"	"6"	"66"	"828827.568359375"	"HCD"	"MS2"	"8.820984"	"75.8"	"100.000"	"68.5531"	"22851"	"22851"	"22828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.7"	""	"73.1"	""	"73.5"	""	"143.3"	""	"180.2"	"159.5"	""	"641"	"34"	"35.000"	"28.000"	"0.012354581363188"	""	"0.0001991"	"0.004191"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGFETK"	"[R].eQGFETk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"3"	"648.86322"	"1296.71916"	"1296.71999"	"-0.64"	"-0.00041"	"6/68"	"6"	"68"	"2656007.34832764"	"HCD"	"MS2"	"0"	"250.3"	"100.000"	"40.9018"	"11663"	"11663"	"11640"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"428.7"	""	"304.3"	""	"350.6"	""	"395.8"	""	"437.7"	"453.1"	""	"615"	"36"	"34.000"	"27.000"	"0.00754822991573147"	"27"	"0.002035"	"0.01767"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDK"	"[R].nISFnDk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"648.86334"	"1296.71941"	"1296.71999"	"-0.45"	"-0.00029"	"6/66"	"6"	"66"	"792410.989685059"	"HCD"	"MS2"	"16.5122"	"77.1"	"100.000"	"68.6236"	"22912"	"22912"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.3"	""	"71.0"	""	"85.6"	""	"146.7"	""	"179.0"	"164.8"	""	"615"	"32"	"34.000"	"27.000"	"0.0182744838774289"	""	"0.0003938"	"0.00624"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGFETK"	"[R].eQGFETk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"3"	"648.86334"	"1296.71941"	"1296.71999"	"-0.45"	"-0.00029"	"6/68"	"6"	"68"	"2741064.06964111"	"HCD"	"MS2"	"0"	"257.8"	"100.000"	"41.0201"	"11676"	"11676"	"11657"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"453.1"	""	"311.1"	""	"357.4"	""	"393.5"	"0.4"	"456.8"	"467.8"	""	"615"	"38"	"34.000"	"27.000"	"0.00536840312023056"	""	"0.00212"	"0.01893"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGFETK"	"[R].eQGFETk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"3"	"648.86359"	"1296.71990"	"1296.71999"	"-0.07"	"-0.00005"	"6/68"	"6"	"68"	"2956793.10748291"	"HCD"	"MS2"	"0"	"250.1"	"100.000"	"40.6053"	"11542"	"11542"	"11521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"454.7"	""	"328.6"	""	"324.8"	""	"370.5"	""	"460.4"	"430.9"	""	"617"	"38"	"34.000"	"27.000"	"0.00499177691612886"	""	"0.002035"	"0.01844"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISFNDK"	"[R].nISFnDk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K7(TMT6plex)"	"2"	"2"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3;Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"P31977; O35763"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3; Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"648.86407"	"1296.72087"	"1296.71999"	"0.68"	"0.00044"	"5/66"	"5"	"66"	"878057.652648926"	"HCD"	"MS2"	"23.65655"	"79.9"	"100.000"	"66.2894"	"21936"	"21936"	"21909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.3"	""	"88.3"	""	"96.0"	""	"142.5"	""	"165.1"	"157.9"	""	"602"	"16"	"34.000"	"27.000"	"0.759567712516652"	"20"	"0.002419"	"0.02292"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQITGPPDR"	"[R].iAQITGPPDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"648.87817"	"1296.74907"	"1296.74732"	"1.35"	"0.00088"	"14/94"	"14"	"94"	"2529907.28302002"	"HCD"	"MS2"	"12.17296"	"137.1"	"100.000"	"55.9370"	"17765"	"17765"	"17751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.2"	""	"185.7"	""	"189.3"	""	"193.0"	"2.8"	"250.0"	"257.8"	""	"486"	"43"	"33.000"	"26.000"	"0.00109296504739069"	"26"	"0"	"0.0001758"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQITGPPDR"	"[R].iAQITGPPDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"648.87854"	"1296.74980"	"1296.74732"	"1.92"	"0.00124"	"7/94"	"7"	"94"	"2402828.43511963"	"HCD"	"MS2"	"0"	"134.3"	"100.000"	"56.2824"	"17871"	"17871"	"17857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.2"	""	"183.5"	""	"186.0"	""	"208.2"	""	"243.0"	"261.1"	""	"476"	"32"	"33.000"	"26.000"	"0.0152959676721451"	"22"	"9.9E-05"	"0.000782"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"648.88171"	"1296.75615"	"1296.75637"	"-0.17"	"-0.00011"	"6/64"	"6"	"64"	"1160190.31787109"	"HCD"	"MS2"	"29.40455"	"99.0"	"100.000"	"65.6683"	"21682"	"21682"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.6"	""	"103.8"	""	"96.3"	""	"232.3"	""	"206.4"	"197.2"	""	"415"	"29"	"33.000"	"26.000"	"0.0270407106528852"	""	"0.000264"	"0.005999"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"648.88184"	"1296.75640"	"1296.75637"	"0.02"	"0.00001"	"6/64"	"6"	"64"	"993569.415771484"	"HCD"	"MS2"	"11.57907"	"86.1"	"100.000"	"65.6695"	"21716"	"21716"	"21696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.5"	""	"93.1"	""	"81.8"	""	"225.3"	""	"163.3"	"176.4"	""	"415"	"30"	"33.000"	"26.000"	"0.0185788188851541"	""	"0.0009352"	"0.00806"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"648.88190"	"1296.75652"	"1296.75637"	"0.11"	"0.00007"	"10/64"	"10"	"64"	"704329.475097656"	"HCD"	"MS2"	"24.58541"	"67.6"	"100.000"	"65.9667"	"21837"	"21837"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"76.5"	""	"77.7"	""	"134.5"	""	"138.8"	"138.2"	""	"415"	"19"	"33.000"	"26.000"	"0.23879108070597"	""	"0.001348"	"0.01132"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESTLHLVLR"	"[K].eSTLHLVLR.[L]"	"N-Term(TMT6plex)"	"1"	"4"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62986; P62982; P0CG51; Q63429"	"Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus OX=10116 GN=Uba52 PE=1 SV=2; Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2; Polyubiquitin-B OS=Rattus norvegicus OX=10116 GN=Ubb PE=1 SV=1; Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.93234"	"1296.78247"	"1296.78370"	"-0.95"	"-0.00041"	"6/68"	"6"	"68"	"1128621.92297363"	"HCD"	"MS2"	"42.86085"	"34.2"	"100.000"	"61.8860"	"20145"	"20145"	"20127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.0"	""	"42.0"	""	"35.9"	""	"63.6"	"1.9"	"72.8"	"76.8"	""	"311"	"30"	"31.000"	"24.000"	"0.0145455582329944"	"14"	"0.0001686"	"0.001267"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESTLHLVLR"	"[K].eSTLHLVLR.[L]"	"N-Term(TMT6plex)"	"1"	"4"	"P62982"	"Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2"	"P62986; P62982; P0CG51; Q63429"	"Ubiquitin-60S ribosomal protein L40 OS=Rattus norvegicus OX=10116 GN=Uba52 PE=1 SV=2; Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus OX=10116 GN=Rps27a PE=1 SV=2; Polyubiquitin-B OS=Rattus norvegicus OX=10116 GN=Ubb PE=1 SV=1; Polyubiquitin-C OS=Rattus norvegicus OX=10116 GN=Ubc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"432.93250"	"1296.78293"	"1296.78370"	"-0.59"	"-0.00026"	"11/68"	"11"	"68"	"1277147.4543457"	"HCD"	"MS2"	"40.92645"	"39.6"	"100.000"	"61.8747"	"20174"	"20174"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.8"	""	"47.0"	""	"46.7"	""	"81.4"	"2.4"	"83.0"	"73.1"	""	"321"	"32"	"32.000"	"25.000"	"0.0105311315241617"	"14"	"9.9E-05"	"0.0004495"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFYINVER"	"[K].qFYINVER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"649.35815"	"1297.70903"	"1297.71020"	"-0.90"	"-0.00059"	"5/70"	"5"	"70"	"1047624.31970215"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"78.3977"	"26842"	"26842"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.5"	""	"80.0"	""	"78.5"	""	"101.8"	"0.8"	"115.4"	"122.3"	""	"614"	"37"	"34.000"	"27.000"	"0.00547190281606563"	"19"	"0.0001686"	"0.001562"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFYINVER"	"[K].qFYINVER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"649.35840"	"1297.70952"	"1297.71020"	"-0.53"	"-0.00034"	"5/70"	"5"	"70"	"972761.600891113"	"HCD"	"MS2"	"3.842053"	"59.3"	"100.000"	"78.4967"	"26909"	"26909"	"26887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.7"	""	"76.2"	""	"78.8"	""	"91.4"	""	"112.0"	"113.0"	""	"621"	"33"	"34.000"	"27.000"	"0.014127379267659"	"16"	"0.0001686"	"0.001262"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGTYDAK"	"[K].nAGTYDAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"649.36145"	"1297.71562"	"1297.71524"	"0.30"	"0.00019"	"7/74"	"7"	"74"	"1304337.3538208"	"HCD"	"MS2"	"34.51559"	"122.3"	"100.000"	"31.5041"	"7859"	"7859"	"7833"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.0"	""	"190.5"	""	"198.2"	""	"248.8"	""	"164.9"	"154.1"	""	"610"	"35"	"34.000"	"27.000"	"0.00957855151632246"	"22"	"9.9E-05"	"0.0004847"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDTEAK"	"[R].lYDTEAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RYI0"	"WD repeat-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Wdr91 PE=2 SV=1"	"B2RYI0"	"WD repeat-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Wdr91 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"649.37311"	"1297.73894"	"1297.74039"	"-1.12"	"-0.00072"	"6/52"	"6"	"52"	"1227650.98718262"	"HCD"	"MS2"	"0"	"112.7"	"100.000"	"50.7543"	"15627"	"15627"	"15606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.6"	""	"143.0"	""	"148.8"	""	"164.9"	""	"210.9"	"219.8"	""	"508"	"16"	"34.000"	"27.000"	"0.623496064583998"	"20"	"0.002875"	"0.03101"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEEGLK"	"[R].tYEEGLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"649.37317"	"1297.73906"	"1297.74039"	"-1.02"	"-0.00066"	"6/54"	"6"	"54"	"2854986.57421875"	"HCD"	"MS2"	"0"	"232.8"	"100.000"	"48.2908"	"14624"	"14624"	"14605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.8"	""	"259.0"	""	"268.2"	""	"429.7"	""	"510.6"	"487.5"	""	"510"	"33"	"34.000"	"27.000"	"0.0123463953733945"	"16"	"0.00212"	"0.01942"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"649.37354"	"1297.73979"	"1297.74039"	"-0.46"	"-0.00030"	"6/64"	"6"	"64"	"623352.973327637"	"HCD"	"MS2"	"17.7282"	"53.3"	"100.000"	"81.1844"	"27975"	"27975"	"27952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.0"	""	"35.0"	""	"42.1"	""	"135.3"	"1.2"	"109.3"	"124.2"	""	"473"	"19"	"33.000"	"26.000"	"0.307490105204873"	""	"0.001261"	"0.009944"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYEEGLK"	"[R].tYEEGLk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"649.37360"	"1297.73992"	"1297.74039"	"-0.36"	"-0.00024"	"6/54"	"6"	"54"	"2544691.49365234"	"HCD"	"MS2"	"6.073599"	"215.3"	"100.000"	"47.9475"	"14522"	"14522"	"14501"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"256.9"	""	"234.5"	""	"242.2"	""	"405.8"	""	"459.7"	"451.3"	""	"473"	"33"	"33.000"	"26.000"	"0.0116904477472386"	"17"	"0.001718"	"0.01525"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDTEAK"	"[R].lYDTEAk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RYI0"	"WD repeat-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Wdr91 PE=2 SV=1"	"B2RYI0"	"WD repeat-containing protein 91 OS=Rattus norvegicus OX=10116 GN=Wdr91 PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"649.37384"	"1297.74040"	"1297.74039"	"0.01"	"0.00001"	"8/52"	"8"	"52"	"873937.099731445"	"HCD"	"MS2"	"0"	"80.5"	"100.000"	"50.3576"	"15500"	"15500"	"15476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.0"	""	"102.2"	""	"112.4"	""	"121.4"	""	"149.5"	"158.4"	""	"473"	"13"	"33.000"	"26.000"	"1.24403083501402"	"19"	"0.002559"	"0.02582"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTESLFK"	"[K].nTESLFk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"P50115"	"Protein S100-A8 OS=Rattus norvegicus OX=10116 GN=S100a8 PE=1 SV=3"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"649.37402"	"1297.74077"	"1297.74039"	"0.29"	"0.00019"	"6/64"	"6"	"64"	"633525.94744873"	"HCD"	"MS2"	"14.95592"	"53.6"	"100.000"	"81.2075"	"28011"	"28011"	"27992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"41.0"	""	"33.0"	""	"149.5"	""	"114.8"	"119.9"	""	"473"	"31"	"33.000"	"26.000"	"0.0170935058551913"	""	"0.0001991"	"0.004743"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEAQHK"	"[K].nLEAQHk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"649.38513"	"1297.76299"	"1297.76286"	"0.10"	"0.00007"	"10/60"	"10"	"60"	"439622.511169434"	"HCD"	"MS2"	"27.40142"	"34.8"	"100.000"	"24.7818"	"5184"	"5184"	"5160"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"36.1"	""	"42.8"	""	"68.6"	"0.9"	"73.4"	"61.5"	""	"391"	"24"	"32.000"	"25.000"	"0.0700078534535653"	"24"	"0.0001991"	"0.003056"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEAQHK"	"[K].nLEAQHk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"649.38513"	"1297.76299"	"1297.76286"	"0.10"	"0.00007"	"6/60"	"6"	"60"	"417369.261535645"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"24.8924"	"5192"	"5192"	"5166"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"36.6"	""	"46.6"	""	"53.8"	"0.6"	"59.4"	"68.2"	""	"391"	"35"	"32.000"	"25.000"	"0.00574310506958479"	"22"	"0.0001991"	"0.00226"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"649.39117"	"1297.77507"	"1297.77677"	"-1.31"	"-0.00085"	"6/54"	"6"	"54"	"1259071.32318115"	"HCD"	"MS2"	"6.394033"	"110.8"	"100.000"	"61.1322"	"19874"	"19874"	"19864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.0"	""	"152.1"	""	"169.8"	""	"157.4"	""	"203.6"	"210.9"	""	"338"	"32"	"32.000"	"25.000"	"0.0116382238082183"	""	"0.0001991"	"0.005292"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"433.26321"	"1297.77509"	"1297.77677"	"-1.30"	"-0.00056"	"5/54"	"5"	"54"	"2071941.66217041"	"HCD"	"MS2"	"19.439"	"93.0"	"100.000"	"60.4717"	"19606"	"19606"	"19586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.1"	""	"132.1"	""	"137.9"	""	"151.7"	""	"162.1"	"165.8"	""	"338"	"32"	"32.000"	"25.000"	"0.0112431163398094"	"25"	"0.001348"	"0.01136"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"433.26324"	"1297.77518"	"1297.77677"	"-1.23"	"-0.00053"	"5/54"	"5"	"54"	"2477031.57397461"	"HCD"	"MS2"	"15.67613"	"105.1"	"100.000"	"60.7871"	"19734"	"19734"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.3"	""	"141.0"	""	"143.9"	""	"169.8"	"0.8"	"186.6"	"192.9"	""	"338"	"26"	"32.000"	"25.000"	"0.0469771542251319"	"21"	"0.004392"	"0.05185"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"649.39136"	"1297.77544"	"1297.77677"	"-1.03"	"-0.00067"	"6/54"	"6"	"54"	"1108711.93481445"	"HCD"	"MS2"	"13.56342"	"94.1"	"100.000"	"54.5049"	"17152"	"17152"	"17127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.5"	""	"117.9"	""	"136.2"	""	"148.5"	""	"187.2"	"200.6"	""	"341"	"19"	"32.000"	"25.000"	"0.213660570327512"	"23"	"0.002035"	"0.01795"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"433.26334"	"1297.77546"	"1297.77677"	"-1.02"	"-0.00044"	"5/54"	"5"	"54"	"2347789.5737915"	"HCD"	"MS2"	"12.01568"	"105.4"	"100.000"	"60.6028"	"19627"	"19627"	"19602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.3"	""	"140.0"	""	"143.7"	""	"162.6"	"0.3"	"208.7"	"187.9"	""	"347"	"21"	"32.000"	"25.000"	"0.1271450564996"	"21"	"0.002189"	"0.02076"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"433.26346"	"1297.77582"	"1297.77677"	"-0.73"	"-0.00032"	"5/54"	"5"	"54"	"2240922.90429688"	"HCD"	"MS2"	"19.84818"	"100.4"	"100.000"	"60.8932"	"19745"	"19745"	"19725"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.2"	""	"125.7"	""	"154.0"	""	"156.0"	"0.1"	"196.8"	"184.0"	""	"347"	"28"	"32.000"	"25.000"	"0.0250783800224419"	"23"	"0.004213"	"0.04701"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"649.39172"	"1297.77617"	"1297.77677"	"-0.47"	"-0.00030"	"6/54"	"6"	"54"	"1875146.44335938"	"HCD"	"MS2"	"34.62093"	"160.3"	"100.000"	"60.2781"	"19528"	"19528"	"19509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.8"	""	"239.1"	""	"230.2"	""	"262.5"	""	"276.5"	"280.9"	""	"333"	"31"	"32.000"	"25.000"	"0.0148393281199268"	"24"	"0.0009352"	"0.00817"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"649.39172"	"1297.77617"	"1297.77677"	"-0.47"	"-0.00030"	"12/54"	"12"	"54"	"17206981.5827637"	"HCD"	"MS2"	"0.1382876"	"882.5"	"70.881"	"60.5704"	"19646"	"19646"	"19628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1345.7"	""	"1238.8"	""	"1303.7"	""	"1391.3"	"0.8"	"1539.2"	"1532.5"	""	"333"	"34"	"32.000"	"25.000"	"0.00668981700063484"	"25"	"0.002525"	"0.02394"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"649.39178"	"1297.77629"	"1297.77677"	"-0.37"	"-0.00024"	"12/54"	"12"	"54"	"6924455.78845215"	"HCD"	"MS2"	"0"	"535.5"	"100.000"	"60.9943"	"19787"	"19787"	"19772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"776.4"	""	"717.6"	""	"790.4"	""	"807.1"	""	"973.2"	"1018.8"	""	"333"	"34"	"32.000"	"25.000"	"0.00668981700063484"	"25"	"0.001348"	"0.01134"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"649.39191"	"1297.77654"	"1297.77677"	"-0.18"	"-0.00012"	"12/54"	"12"	"54"	"10159613.9002686"	"HCD"	"MS2"	"0"	"669.8"	"86.270"	"60.8515"	"19761"	"19761"	"19744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"994.3"	""	"905.6"	""	"1014.0"	""	"1000.7"	""	"1185.1"	"1245.4"	""	"334"	"36"	"32.000"	"25.000"	"0.00467429880378939"	"25"	"0.00212"	"0.01911"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"649.39215"	"1297.77703"	"1297.77677"	"0.19"	"0.00013"	"12/54"	"12"	"54"	"18718790.4095459"	"HCD"	"MS2"	"0"	"923.5"	"66.171"	"60.6928"	"19664"	"19664"	"19647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1410.3"	""	"1281.3"	""	"1369.7"	""	"1407.7"	""	"1623.4"	"1657.4"	""	"334"	"36"	"32.000"	"25.000"	"0.00463144457476858"	"25"	"0.00192"	"0.01621"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSTYIK"	"[K].eVSTYIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"649.39240"	"1297.77751"	"1297.77677"	"0.57"	"0.00037"	"12/54"	"12"	"54"	"2116248.20648193"	"HCD"	"MS2"	"26.95135"	"167.8"	"100.000"	"60.3980"	"19543"	"19543"	"19524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.8"	""	"243.9"	""	"249.9"	""	"270.6"	""	"278.6"	"281.1"	""	"333"	"35"	"32.000"	"25.000"	"0.0053384384253016"	"25"	"0.001049"	"0.00871"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFDYNLR"	"[R].eLFDYNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"649.84998"	"1298.69267"	"1298.69422"	"-1.19"	"-0.00077"	"6/66"	"6"	"66"	"432038.750244141"	"HCD"	"MS2"	"16.80941"	"26.7"	"100.000"	"98.7880"	"35103"	"35103"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"36.5"	""	"39.2"	""	"47.4"	""	"47.4"	"42.7"	""	"580"	"37"	"34.000"	"27.000"	"0.005975826748483"	"20"	"0.0001991"	"0.0026"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFDYNLR"	"[R].eLFDYNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"649.85083"	"1298.69438"	"1298.69422"	"0.13"	"0.00008"	"5/66"	"5"	"66"	"238854.372009277"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"99.0786"	"35190"	"35190"	"35170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.6"	""	"16.8"	""	"18.1"	""	"30.4"	""	"32.2"	"30.3"	""	"589"	"30"	"34.000"	"27.000"	"0.0327404993684429"	"22"	"0.0009352"	"0.008039"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFDYNLR"	"[R].eLFDYNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"649.85101"	"1298.69475"	"1298.69422"	"0.41"	"0.00027"	"6/66"	"6"	"66"	"347664.255615234"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"99.0820"	"35221"	"35221"	"35202"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"27.3"	""	"24.2"	""	"36.9"	""	"35.9"	"36.4"	""	"585"	"44"	"34.000"	"27.000"	"0.00110185861202793"	"24"	"0.0001686"	"0.001587"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFDYNLR"	"[R].eLFDYNLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"649.85107"	"1298.69487"	"1298.69422"	"0.50"	"0.00033"	"6/66"	"6"	"66"	"521505.506774902"	"HCD"	"MS2"	"6.133509"	"31.1"	"100.000"	"98.7739"	"35067"	"35067"	"35050"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"37.0"	""	"38.1"	""	"51.9"	""	"57.1"	"56.2"	""	"585"	"36"	"34.000"	"27.000"	"0.00688851915539582"	"22"	"9.9E-05"	"0.0005865"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"649.87842"	"1298.74956"	"1298.75173"	"-1.67"	"-0.00109"	"5/78"	"5"	"78"	"327847.816894531"	"HCD"	"MS2"	"31.72902"	"17.2"	"100.000"	"90.2715"	"31630"	"31630"	"31606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"17.9"	""	"24.8"	""	"27.1"	""	"39.4"	"30.2"	""	"483"	"39"	"33.000"	"26.000"	"0.00277918293930081"	""	"0.0001686"	"0.001589"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"649.87897"	"1298.75066"	"1298.75173"	"-0.83"	"-0.00054"	"5/78"	"5"	"78"	"436686.280517578"	"HCD"	"MS2"	"17.99141"	"22.5"	"100.000"	"90.1898"	"31635"	"31635"	"31609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.4"	""	"30.5"	""	"30.3"	""	"33.2"	"0.3"	"42.3"	"44.0"	""	"483"	"31"	"33.000"	"26.000"	"0.0184466341734012"	"24"	"0.0001686"	"0.001055"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"649.87897"	"1298.75066"	"1298.75173"	"-0.83"	"-0.00054"	"7/78"	"7"	"78"	"2524606.87329102"	"HCD"	"MS2"	"0"	"99.4"	"100.000"	"90.4736"	"31749"	"31749"	"31733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.8"	""	"112.9"	""	"120.3"	""	"165.6"	""	"201.6"	"200.1"	""	"483"	"49"	"33.000"	"26.000"	"0.000274105111984864"	""	"0"	"5.169E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"649.87939"	"1298.75151"	"1298.75173"	"-0.17"	"-0.00011"	"7/78"	"7"	"78"	"991570.772949219"	"HCD"	"MS2"	"6.553175"	"50.3"	"100.000"	"90.8759"	"31872"	"31872"	"31855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"60.6"	""	"60.8"	""	"93.5"	""	"96.9"	"107.0"	""	"485"	"45"	"33.000"	"26.000"	"0.00079746520487426"	"26"	"0"	"6.21E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"649.87952"	"1298.75176"	"1298.75173"	"0.02"	"0.00001"	"5/78"	"5"	"78"	"1212897.89465332"	"HCD"	"MS2"	"6.453999"	"57.9"	"100.000"	"90.7527"	"31860"	"31860"	"31849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.3"	""	"60.4"	""	"72.7"	""	"101.9"	"0.2"	"116.9"	"111.8"	""	"485"	"40"	"33.000"	"26.000"	"0.00261042814305235"	""	"0"	"0.0002914"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDPVLDR"	"[K].eIIDPVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q5XIF6"	"Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"649.87970"	"1298.75212"	"1298.75173"	"0.30"	"0.00020"	"7/78"	"7"	"78"	"2477679.80621338"	"HCD"	"MS2"	"0.8180752"	"95.6"	"100.000"	"90.5669"	"31748"	"31748"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.5"	""	"122.1"	""	"109.0"	""	"163.5"	"0.3"	"199.6"	"180.5"	""	"485"	"49"	"33.000"	"26.000"	"0.000275240122800536"	""	"0"	"4.332E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPEELLLR"	"[K].lSPEELLLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"649.89722"	"1298.78716"	"1298.78812"	"-0.74"	"-0.00048"	"5/70"	"5"	"70"	"887065.855529785"	"HCD"	"MS2"	"5.501682"	"42.9"	"100.000"	"110.9355"	"39901"	"39901"	"39884"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"55.7"	""	"63.4"	""	"76.7"	""	"79.4"	"82.1"	""	"413"	"37"	"33.000"	"26.000"	"0.00373181457021256"	""	"0.0001686"	"0.001917"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPEELLLR"	"[K].lSPEELLLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"649.89728"	"1298.78728"	"1298.78812"	"-0.65"	"-0.00042"	"6/70"	"6"	"70"	"1021477.43792725"	"HCD"	"MS2"	"8.386482"	"47.0"	"100.000"	"110.7991"	"39832"	"39832"	"39815"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.2"	""	"60.8"	""	"65.6"	""	"76.5"	""	"85.8"	"85.1"	""	"409"	"45"	"33.000"	"26.000"	"0.000720598431281886"	""	"0.0001686"	"0.001617"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPEELLLR"	"[K].lSPEELLLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"649.89746"	"1298.78765"	"1298.78812"	"-0.36"	"-0.00024"	"5/70"	"5"	"70"	"10717956.3814087"	"HCD"	"MS2"	"0"	"390.6"	"100.000"	"110.6214"	"39773"	"39773"	"39756"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"579.5"	""	"509.9"	""	"541.6"	""	"659.6"	""	"684.5"	"729.9"	""	"409"	"38"	"33.000"	"26.000"	"0.00361154734330321"	""	"0"	"0.0003311"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPEELLLR"	"[K].lSPEELLLR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"649.89758"	"1298.78789"	"1298.78812"	"-0.18"	"-0.00011"	"11/70"	"11"	"70"	"9904348.98974609"	"HCD"	"MS2"	"0"	"391.6"	"100.000"	"110.4848"	"39704"	"39704"	"39687"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"551.4"	""	"511.6"	""	"576.7"	""	"686.4"	""	"677.6"	"708.0"	""	"409"	"36"	"33.000"	"26.000"	"0.00552959485460259"	""	"9.9E-05"	"0.0004506"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAAEEFK"	"[K].fAAEEFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"650.37048"	"1299.73369"	"1299.73491"	"-0.94"	"-0.00061"	"12/50"	"12"	"50"	"470178.033508301"	"HCD"	"MS2"	"6.149597"	"39.4"	"100.000"	"81.4567"	"28085"	"28085"	"28065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"38.4"	""	"41.5"	""	"82.0"	""	"78.8"	"98.0"	""	"610"	"36"	"34.000"	"27.000"	"0.00819030055925845"	"26"	"0.0001991"	"0.002316"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAAEEFK"	"[K].fAAEEFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"Q5BJP3"	"Ubiquitin-fold modifier 1 OS=Rattus norvegicus OX=10116 GN=Ufm1 PE=3 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"650.37067"	"1299.73406"	"1299.73491"	"-0.66"	"-0.00043"	"6/50"	"6"	"50"	"405581.656066895"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"81.5760"	"28161"	"28161"	"28140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"28.0"	""	"41.1"	""	"77.3"	"1.1"	"74.3"	"83.2"	""	"606"	"20"	"34.000"	"27.000"	"0.314371109992858"	"17"	"0.001261"	"0.009663"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVNILNNGR"	"[K].vAVNILNnGR.[F]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"650.38232"	"1299.75737"	"1299.75822"	"-0.65"	"-0.00042"	"9/86"	"9"	"86"	"244645.782470703"	"HCD"	"MS2"	"50.12964"	"16.2"	"100.000"	"79.1559"	"27178"	"27178"	"27150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"20.5"	""	"19.5"	""	"25.3"	""	"31.8"	"33.1"	""	"518"	"6"	"34.000"	"27.000"	"6.89127790487892"	"13"	"0.008289"	"0.106"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVNILNNGR"	"[K].vAVNILNnGR.[F]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.38239"	"1299.75749"	"1299.75822"	"-0.56"	"-0.00036"	"4/86"	"4"	"86"	"262371.052490234"	"HCD"	"MS2"	"46.72495"	"17.3"	"100.000"	"79.0570"	"27111"	"27111"	"27088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"27.4"	""	"26.7"	""	"27.6"	""	"34.6"	"30.1"	""	"531"	"2"	"34.000"	"27.000"	"16.9849598820643"	"13"	"0.004959"	"0.06189"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVNILNNGR"	"[K].vAVNILnNGR.[F]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"650.38239"	"1299.75749"	"1299.75822"	"-0.56"	"-0.00036"	"4/86"	"4"	"86"	"262371.052490234"	"HCD"	"MS2"	"46.72495"	"17.3"	"100.000"	"79.0570"	"27111"	"27111"	"27088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"27.4"	""	"26.7"	""	"27.6"	""	"34.6"	"30.1"	""	"531"	"2"	"34.000"	"27.000"	"16.9849598820643"	"13"	"0.004959"	"0.06189"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVHELEK"	"[K].sVHELEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"433.92682"	"1299.76590"	"1299.76727"	"-1.05"	"-0.00046"	"10/58"	"10"	"58"	"8055186.22424316"	"HCD"	"MS2"	"36.61432"	"359.1"	"100.000"	"34.4537"	"9016"	"9016"	"8997"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"397.3"	""	"503.5"	""	"502.3"	""	"679.2"	""	"703.9"	"621.5"	""	"459"	"36"	"33.000"	"26.000"	"0.00642366212856086"	"22"	"0.0001991"	"0.005037"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"650.38678"	"1299.76628"	"1299.76727"	"-0.76"	"-0.00049"	"7/78"	"7"	"78"	"993692.024414063"	"HCD"	"MS2"	"17.91748"	"52.7"	"100.000"	"36.5093"	"9882"	"9882"	"9860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.4"	""	"86.8"	""	"87.8"	""	"89.8"	""	"81.5"	"69.2"	""	"460"	"44"	"33.000"	"26.000"	"0.000862437905164613"	"19"	"0.0001686"	"0.001545"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"650.38678"	"1299.76628"	"1299.76727"	"-0.76"	"-0.00049"	"7/78"	"7"	"78"	"1675298.00158691"	"HCD"	"MS2"	"0"	"79.6"	"100.000"	"37.2465"	"10145"	"10145"	"10115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.8"	""	"132.6"	""	"140.2"	""	"143.7"	"0.4"	"104.4"	"91.5"	""	"460"	"31"	"33.000"	"26.000"	"0.0178948406739155"	"20"	"0.001488"	"0.01225"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"650.38678"	"1299.76628"	"1299.76727"	"-0.76"	"-0.00049"	"7/78"	"7"	"78"	"1594351.9107666"	"HCD"	"MS2"	"0"	"79.5"	"100.000"	"37.1459"	"10141"	"10141"	"10118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.3"	""	"122.8"	""	"134.9"	""	"142.2"	""	"119.5"	"102.5"	""	"460"	"38"	"33.000"	"26.000"	"0.004043224312105"	"21"	"0.0001991"	"0.004398"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVHELEK"	"[K].sVHELEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"433.92709"	"1299.76673"	"1299.76727"	"-0.42"	"-0.00018"	"5/58"	"5"	"58"	"5693908.85009766"	"HCD"	"MS2"	"30.56367"	"258.9"	"100.000"	"34.3228"	"8999"	"8999"	"8978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.3"	""	"346.3"	""	"378.9"	""	"480.3"	""	"529.9"	"433.9"	""	"442"	"14"	"33.000"	"26.000"	"0.834434541945169"	"15"	"0.005194"	"0.06604"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"650.38702"	"1299.76677"	"1299.76727"	"-0.39"	"-0.00025"	"6/78"	"6"	"78"	"703753.487426758"	"HCD"	"MS2"	"0"	"41.2"	"100.000"	"36.5869"	"9876"	"9876"	"9854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.3"	""	"67.1"	""	"72.8"	""	"67.5"	""	"62.8"	"54.5"	""	"442"	"35"	"33.000"	"26.000"	"0.00675137566020629"	"20"	"0.0009352"	"0.008337"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEHLSK"	"[R].dLEHLSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"3"	"433.92719"	"1299.76700"	"1299.76727"	"-0.21"	"-0.00009"	"7/58"	"7"	"58"	"2515832.78314209"	"HCD"	"MS2"	"24.66003"	"135.8"	"100.000"	"46.5465"	"13918"	"13918"	"13902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.6"	""	"162.1"	""	"153.3"	""	"219.9"	"0.9"	"262.8"	"256.0"	""	"444"	"27"	"33.000"	"26.000"	"0.0424964815354681"	""	"0.002834"	"0.0301"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEHLSK"	"[R].dLEHLSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"3"	"433.92719"	"1299.76700"	"1299.76727"	"-0.21"	"-0.00009"	"5/58"	"5"	"58"	"6445524.62365723"	"HCD"	"MS2"	"5.592123"	"300.8"	"100.000"	"46.8329"	"14031"	"14031"	"14020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"479.5"	""	"336.2"	""	"382.5"	""	"504.4"	""	"587.6"	"564.7"	""	"444"	"28"	"33.000"	"26.000"	"0.0334466768693457"	""	"0.001615"	"0.01418"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"650.38721"	"1299.76714"	"1299.76727"	"-0.10"	"-0.00007"	"7/78"	"7"	"78"	"1302215.66516113"	"HCD"	"MS2"	"0"	"68.9"	"100.000"	"37.4828"	"10277"	"10277"	"10260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.1"	""	"109.8"	""	"113.6"	""	"135.6"	""	"104.6"	"81.2"	""	"444"	"33"	"33.000"	"26.000"	"0.011152005487397"	"18"	"0.0001991"	"0.004435"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"650.38727"	"1299.76726"	"1299.76727"	"-0.01"	"-0.00001"	"5/78"	"5"	"78"	"572006.531738281"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"38.1809"	"10560"	"10560"	"10535"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.6"	""	"65.8"	""	"65.3"	""	"83.2"	""	"81.2"	"68.1"	""	"444"	"31"	"33.000"	"26.000"	"0.0171930519112159"	"21"	"0.0001991"	"0.005384"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"650.38739"	"1299.76750"	"1299.76727"	"0.18"	"0.00012"	"5/78"	"5"	"78"	"602566.823486328"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"38.2338"	"10546"	"10546"	"10518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"61.6"	""	"74.2"	""	"75.2"	""	"67.1"	"65.0"	""	"444"	"31"	"33.000"	"26.000"	"0.0159350332662242"	"18"	"0.0005161"	"0.006626"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEHLSK"	"[R].dLEHLSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.5517"	"0.0000"	"1"	"1"	"3"	"433.92740"	"1299.76764"	"1299.76727"	"0.29"	"0.00012"	"10/58"	"10"	"58"	"5723429.12835693"	"HCD"	"MS2"	"8.877352"	"270.0"	"100.000"	"46.4946"	"13931"	"13931"	"13914"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"405.4"	""	"303.3"	""	"342.2"	""	"459.8"	""	"537.1"	"515.3"	""	"444"	"29"	"33.000"	"26.000"	"0.0250814693057361"	""	"0.0009352"	"0.008303"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"650.38763"	"1299.76799"	"1299.76727"	"0.55"	"0.00036"	"7/78"	"7"	"78"	"1302317.74682617"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"37.5542"	"10270"	"10270"	"10248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.5"	""	"103.4"	""	"118.1"	""	"117.6"	"0.8"	"105.7"	"81.0"	""	"436"	"34"	"33.000"	"26.000"	"0.00796996645716613"	"17"	"0.0001991"	"0.00466"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"650.38770"	"1299.76811"	"1299.76727"	"0.65"	"0.00042"	"8/78"	"8"	"78"	"999483.128234863"	"HCD"	"MS2"	"20.2482"	"59.7"	"100.000"	"37.9167"	"10416"	"10416"	"10394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.1"	""	"84.2"	""	"83.6"	""	"126.3"	"0.2"	"101.1"	"90.3"	""	"433"	"34"	"33.000"	"26.000"	"0.00934238801332112"	"20"	"0.0001991"	"0.003838"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPGADK"	"[R].sAVPPGADk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"P63326"	"40S ribosomal protein S10 OS=Rattus norvegicus OX=10116 GN=Rps10 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"650.38776"	"1299.76824"	"1299.76727"	"0.74"	"0.00048"	"5/78"	"5"	"78"	"1064220.25775146"	"HCD"	"MS2"	"21.68282"	"57.9"	"100.000"	"37.7993"	"10404"	"10404"	"10378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	""	"80.6"	""	"84.5"	""	"112.4"	"1.6"	"95.6"	"83.0"	""	"433"	"19"	"33.000"	"26.000"	"0.280839312168026"	"15"	"0.002834"	"0.03062"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEHLSK"	"[R].dLEHLSk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.4348"	"0.0000"	"1"	"1"	"3"	"433.92764"	"1299.76838"	"1299.76727"	"0.85"	"0.00037"	"8/58"	"8"	"58"	"2769949.75292969"	"HCD"	"MS2"	"0"	"148.1"	"100.000"	"46.1876"	"13810"	"13810"	"13793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.6"	""	"171.3"	""	"177.4"	""	"265.4"	""	"273.0"	"277.0"	""	"433"	"23"	"33.000"	"26.000"	"0.110779117394477"	""	"0.004213"	"0.04757"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDGEWYR"	"[K].fVDGEWYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"650.82953"	"1300.65178"	"1300.65235"	"-0.44"	"-0.00029"	"6/60"	"6"	"60"	"2799664.27642822"	"HCD"	"MS2"	"21.21642"	"107.5"	"100.000"	"93.3466"	"32868"	"32868"	"32854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.2"	""	"124.1"	""	"120.1"	""	"190.7"	""	"216.3"	"220.2"	""	"539"	"30"	"34.000"	"27.000"	"0.0242414598222344"	"23"	"0.0001991"	"0.004791"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDGEWYR"	"[K].fVDGEWYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"650.83002"	"1300.65276"	"1300.65235"	"0.31"	"0.00020"	"6/60"	"6"	"60"	"791594.241516113"	"HCD"	"MS2"	"17.49159"	"41.0"	"100.000"	"92.9850"	"32759"	"32759"	"32739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.2"	""	"54.6"	""	"48.2"	""	"64.7"	""	"86.3"	"86.1"	""	"531"	"34"	"34.000"	"27.000"	"0.0117507212862277"	"19"	"0.0001991"	"0.004488"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDGEWYR"	"[K].fVDGEWYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"650.83014"	"1300.65300"	"1300.65235"	"0.50"	"0.00032"	"6/60"	"6"	"60"	"2888781.92871094"	"HCD"	"MS2"	"19.34798"	"114.4"	"100.000"	"93.2739"	"32876"	"32876"	"32862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.2"	""	"130.0"	""	"154.1"	""	"198.1"	""	"210.2"	"238.8"	""	"534"	"28"	"34.000"	"27.000"	"0.0396744816490631"	"21"	"0.00212"	"0.0191"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVDGEWYR"	"[K].fVDGEWYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"650.83044"	"1300.65361"	"1300.65235"	"0.97"	"0.00063"	"6/60"	"6"	"60"	"786716.654052734"	"HCD"	"MS2"	"22.26268"	"42.6"	"100.000"	"93.0699"	"32757"	"32757"	"32742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.5"	""	"53.8"	""	"50.7"	""	"74.6"	""	"84.9"	"80.5"	""	"540"	"24"	"34.000"	"27.000"	"0.113334925677572"	"25"	"0.0001991"	"0.003135"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"650.84009"	"1300.67290"	"1300.67348"	"-0.45"	"-0.00029"	"7/68"	"7"	"68"	"1502725.94818115"	"HCD"	"MS2"	"9.725576"	"86.6"	"100.000"	"76.2407"	"26002"	"26002"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.5"	""	"97.6"	""	"96.7"	""	"136.4"	""	"195.4"	"191.8"	""	"595"	"38"	"34.000"	"27.000"	"0.00469339352735556"	"24"	"9.9E-05"	"0.001003"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"650.84039"	"1300.67351"	"1300.67348"	"0.02"	"0.00001"	"11/68"	"11"	"68"	"1430432.76245117"	"HCD"	"MS2"	"7.524799"	"86.7"	"100.000"	"76.1634"	"25939"	"25939"	"25923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.7"	""	"110.5"	""	"96.6"	""	"136.6"	"0.1"	"184.0"	"187.6"	""	"598"	"41"	"34.000"	"27.000"	"0.00231031494943615"	"26"	"9.9E-05"	"0.0008897"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"650.84039"	"1300.67351"	"1300.67348"	"0.02"	"0.00001"	"6/68"	"6"	"68"	"1680862.24597168"	"HCD"	"MS2"	"0"	"95.6"	"100.000"	"76.4634"	"26062"	"26062"	"26047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.0"	""	"112.0"	""	"107.7"	""	"157.9"	"0.6"	"218.8"	"203.1"	""	"598"	"41"	"34.000"	"27.000"	"0.00220633364808601"	"26"	"9.9E-05"	"0.0008072"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYLNDLDR"	"[K].yYLNDLDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"650.84045"	"1300.67363"	"1300.67348"	"0.11"	"0.00007"	"11/68"	"11"	"68"	"1761765.84570313"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"76.5378"	"26123"	"26123"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.6"	""	"109.1"	""	"118.5"	""	"158.2"	""	"235.4"	"229.7"	""	"598"	"38"	"34.000"	"27.000"	"0.00488282532420406"	"23"	"9.9E-05"	"0.0008892"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"650.84259"	"1300.67790"	"1300.67852"	"-0.47"	"-0.00031"	"7/64"	"7"	"64"	"747337.872375488"	"HCD"	"MS2"	"0"	"78.6"	"100.000"	"31.3169"	"7783"	"7783"	"7760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.8"	""	"65.7"	""	"72.6"	""	"150.7"	""	"179.5"	"188.6"	""	"568"	"44"	"34.000"	"27.000"	"0.00112025873789379"	"19"	"0"	"0.000245"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"650.84259"	"1300.67790"	"1300.67852"	"-0.47"	"-0.00031"	"6/64"	"6"	"64"	"1529580.04797363"	"HCD"	"MS2"	"0"	"144.1"	"100.000"	"31.1342"	"7675"	"7675"	"7652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.9"	""	"111.5"	""	"142.2"	""	"288.4"	""	"321.9"	"305.9"	""	"568"	"32"	"34.000"	"27.000"	"0.0164937094576053"	"17"	"0.0001686"	"0.00119"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"650.84283"	"1300.67839"	"1300.67852"	"-0.10"	"-0.00006"	"7/64"	"7"	"64"	"1013731.67645264"	"HCD"	"MS2"	"0"	"96.9"	"100.000"	"31.4288"	"7790"	"7790"	"7770"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.7"	""	"70.3"	""	"100.5"	""	"193.7"	""	"229.9"	"219.1"	""	"574"	"44"	"34.000"	"27.000"	"0.0011399397469773"	"25"	"9.9E-05"	"0.0005492"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYK"	"[K].gDTSGDYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"650.84338"	"1300.67949"	"1300.67852"	"0.75"	"0.00049"	"12/64"	"12"	"64"	"1288008.51867676"	"HCD"	"MS2"	"0"	"123.8"	"100.000"	"30.9912"	"7655"	"7655"	"7636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.9"	""	"99.9"	""	"121.8"	""	"242.9"	""	"285.3"	"268.9"	""	"566"	"38"	"34.000"	"27.000"	"0.00413796140371251"	"18"	"0.0001686"	"0.001031"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPANLEEAR"	"[K].aTPANLEEAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.4815"	"0.0000"	"1"	"1"	"1"	"650.85675"	"1300.70622"	"1300.70585"	"0.29"	"0.00019"	"7/94"	"7"	"94"	"1217444.21466064"	"HCD"	"MS2"	"35.64836"	"62.7"	"100.000"	"37.9211"	"10454"	"10454"	"10426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.8"	""	"95.7"	""	"75.7"	""	"117.0"	""	"109.5"	"104.1"	""	"625"	"27"	"34.000"	"27.000"	"0.059820497656909"	""	"0.0001686"	"0.001166"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"650.87427"	"1300.74126"	"1300.74223"	"-0.75"	"-0.00049"	"6/72"	"6"	"72"	"1691095.94232178"	"HCD"	"MS2"	"40.57649"	"69.0"	"100.000"	"80.6354"	"27753"	"27753"	"27736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.6"	""	"84.4"	""	"101.7"	""	"112.1"	"0.4"	"117.8"	"133.4"	""	"631"	"44"	"34.000"	"28.000"	"0.00121618421843551"	""	"0"	"0.0002785"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"650.87476"	"1300.74224"	"1300.74223"	"0.00"	"0.00000"	"6/72"	"6"	"72"	"1727276.16534424"	"HCD"	"MS2"	"35.0215"	"69.8"	"100.000"	"80.7231"	"27815"	"27815"	"27795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.9"	""	"105.6"	""	"98.1"	""	"103.2"	""	"130.0"	"125.7"	""	"664"	"45"	"35.000"	"28.000"	"0.0010993553233222"	""	"0"	"7.763E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"650.87506"	"1300.74285"	"1300.74223"	"0.47"	"0.00031"	"6/72"	"6"	"72"	"1012654.02404785"	"HCD"	"MS2"	"12.39556"	"50.6"	"100.000"	"81.0158"	"27934"	"27934"	"27916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"65.5"	""	"68.2"	""	"82.3"	"2.0"	"98.4"	"102.7"	""	"681"	"45"	"35.000"	"28.000"	"0.00113010062796664"	""	"0"	"0.0001355"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLLLNNVR"	"[R].dDLLLNNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"D4AAT7"	"ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Rattus norvegicus OX=10116 GN=Naxd PE=3 SV=1"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"650.87512"	"1300.74297"	"1300.74223"	"0.57"	"0.00037"	"6/72"	"6"	"72"	"1101853.76977539"	"HCD"	"MS2"	"11.32193"	"54.8"	"100.000"	"80.9420"	"27877"	"27877"	"27859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.7"	""	"73.3"	""	"82.7"	""	"86.0"	"0.1"	"96.2"	"98.5"	""	"681"	"42"	"35.000"	"28.000"	"0.00218331860827248"	""	"0"	"8.468E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANNGNLLLR"	"[R].sANNGNLLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"650.88019"	"1300.75310"	"1300.75346"	"-0.28"	"-0.00018"	"8/86"	"8"	"86"	"974419.344726563"	"HCD"	"MS2"	"5.559149"	"57.3"	"100.000"	"47.7773"	"14453"	"14453"	"14426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.7"	""	"67.9"	""	"64.7"	""	"105.7"	"1.6"	"106.7"	"108.8"	""	"695"	"43"	"35.000"	"28.000"	"0.00193176729401465"	"23"	"0"	"0.0001044"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANNGNLLLR"	"[R].sANNGNLLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"650.88043"	"1300.75359"	"1300.75346"	"0.10"	"0.00006"	"9/86"	"9"	"86"	"895391.520568848"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"48.0328"	"14519"	"14519"	"14493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.9"	""	"85.4"	""	"79.9"	""	"96.2"	""	"101.9"	"114.8"	""	"694"	"40"	"35.000"	"28.000"	"0.003701088540669"	"17"	"0"	"4.458E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IILNELAQR"	"[K].iILnELAqR.[G]"	"N-Term(TMT6plex); N4(Deamidated); Q8(Deamidated)"	"1"	"1"	"P09875"	"UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"P09875"	"UDP-glucuronosyltransferase 2B1 OS=Rattus norvegicus OX=10116 GN=Ugt2b1 PE=2 SV=1"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"650.88763"	"1300.76799"	"1300.76738"	"0.47"	"0.00030"	"5/74"	"5"	"74"	"170751.72479248"	"HCD"	"MS2"	"38.38091"	"11.2"	"100.000"	"108.3609"	"38887"	"38887"	"38881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"12.4"	""	"10.1"	""	"20.5"	""	"20.9"	"29.9"	""	"739"	"15"	"35.000"	"28.000"	"1.13400362471053"	"27"	"0.0065"	"0.08036"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSSIAYDR"	"[K].fNSSIAYDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.33734"	"1301.66741"	"1301.66873"	"-1.02"	"-0.00066"	"7/88"	"7"	"88"	"318169.350952148"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"56.8538"	"18135"	"18135"	"18109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.9"	""	"29.6"	""	"38.2"	""	"41.0"	"1.1"	"47.8"	"55.4"	""	"538"	"37"	"34.000"	"27.000"	"0.00589864527609271"	"15"	"0.0009352"	"0.00833"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSSIAYDR"	"[K].fNSSIAYDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.33752"	"1301.66777"	"1301.66873"	"-0.74"	"-0.00048"	"6/88"	"6"	"88"	"709034.375183105"	"HCD"	"MS2"	"5.96071"	"47.4"	"100.000"	"57.3278"	"18292"	"18292"	"18280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.6"	""	"61.8"	""	"74.9"	""	"72.8"	"0.9"	"88.0"	"87.9"	""	"536"	"48"	"34.000"	"27.000"	"0.000444769291193266"	"15"	"0"	"5.835E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSSIAYDR"	"[K].fNSSIAYDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"651.33826"	"1301.66924"	"1301.66873"	"0.39"	"0.00025"	"7/88"	"7"	"88"	"870548.433227539"	"HCD"	"MS2"	"5.252525"	"59.2"	"100.000"	"57.1778"	"18266"	"18266"	"18247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.0"	""	"69.1"	""	"84.6"	""	"87.0"	""	"125.3"	"115.0"	""	"550"	"49"	"34.000"	"27.000"	"0.000355085300243722"	"21"	"0"	"6.642E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSGALHFLGR"	"[R].dSGALHFLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"434.57587"	"1301.71305"	"1301.71635"	"-2.54"	"-0.00110"	"10/74"	"10"	"74"	"1224321.81439209"	"HCD"	"MS2"	"38.84303"	"26.1"	"100.000"	"63.8383"	"20971"	"20971"	"20958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.3"	""	"34.3"	""	"33.1"	""	"40.8"	"0.5"	"51.5"	"44.2"	""	"723"	"28"	"35.000"	"28.000"	"0.0568994805504539"	"26"	"0"	"0.0003997"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSGALHFLGR"	"[R].dSGALHFLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"P01015"	"Angiotensinogen OS=Rattus norvegicus OX=10116 GN=Agt PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"434.57626"	"1301.71424"	"1301.71635"	"-1.62"	"-0.00070"	"13/74"	"13"	"74"	"1321805.449646"	"HCD"	"MS2"	"63.79431"	"27.7"	"100.000"	"63.9104"	"20969"	"20969"	"20946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"37.9"	""	"37.3"	""	"44.6"	"1.0"	"49.5"	"44.7"	""	"712"	"27"	"35.000"	"28.000"	"0.0697348703768133"	"24"	"0.0001686"	"0.001649"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQEPESIR"	"[R].lTQEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"651.36694"	"1301.72661"	"1301.72625"	"0.28"	"0.00018"	"7/86"	"7"	"86"	"584061.99017334"	"HCD"	"MS2"	"10.74792"	"48.6"	"100.000"	"45.4536"	"13477"	"13477"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	""	"50.9"	""	"64.8"	""	"83.5"	"2.0"	"93.2"	"89.9"	""	"774"	"32"	"35.000"	"28.000"	"0.025568836437894"	"19"	"0.0001991"	"0.003141"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHDAMK"	"[K].eLHDAMk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4242"	"0.0000"	"1"	"1"	"1"	"434.58069"	"1301.72751"	"1301.72878"	"-0.97"	"-0.00042"	"6/54"	"6"	"54"	"8292433.94989014"	"HCD"	"MS2"	"29.68049"	"345.6"	"100.000"	"34.7340"	"9130"	"9130"	"9108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"513.5"	""	"469.6"	""	"518.8"	""	"481.4"	""	"603.9"	"688.5"	""	"782"	"33"	"35.000"	"28.000"	"0.0213391323686687"	""	"0.0001991"	"0.003905"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHDAMK"	"[K].eLHDAMk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4800"	"0.0000"	"1"	"1"	"1"	"434.58087"	"1301.72806"	"1301.72878"	"-0.55"	"-0.00024"	"7/54"	"7"	"54"	"11215731.0646973"	"HCD"	"MS2"	"21.66236"	"481.9"	"100.000"	"34.6422"	"9129"	"9129"	"9104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"687.2"	""	"638.5"	""	"744.2"	""	"672.4"	""	"853.2"	"976.0"	""	"791"	"25"	"35.000"	"28.000"	"0.11275777247978"	"27"	"0.0001991"	"0.005706"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQEPESIR"	"[R].lTQEPESIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"651.36768"	"1301.72807"	"1301.72625"	"1.40"	"0.00091"	"7/86"	"7"	"86"	"687216.86505127"	"HCD"	"MS2"	"27.97733"	"55.5"	"100.000"	"45.1556"	"13390"	"13390"	"13360"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.0"	""	"60.0"	""	"76.5"	""	"101.6"	""	"100.3"	"103.6"	""	"791"	"31"	"35.000"	"28.000"	"0.0313434276205026"	"24"	"9.9E-05"	"0.0005434"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANNGNLLLR"	"[R].sANnGNLLLR.[N]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.0444"	"0.0000"	"1"	"1"	"1"	"651.37213"	"1301.73699"	"1301.73748"	"-0.38"	"-0.00025"	"7/86"	"7"	"86"	"1137612.24963379"	"HCD"	"MS2"	"0"	"63.4"	"100.000"	"58.2958"	"18723"	"18723"	"18699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.3"	""	"74.0"	""	"80.2"	""	"100.7"	""	"125.7"	"134.2"	""	"815"	"45"	"36.000"	"29.000"	"0.00127387734210301"	"24"	"0"	"5.124E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANNGNLLLR"	"[R].sAnNGNLLLR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	""	"0.0444"	"2"	"2"	"2"	"651.37213"	"1301.73699"	"1301.73748"	"-0.38"	"-0.00025"	"7/86"	"7"	"86"	"1137612.24963379"	"HCD"	"MS2"	"0"	"63.4"	"100.000"	"58.2958"	"18723"	"18723"	"18699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.3"	""	"74.0"	""	"80.2"	""	"100.7"	""	"125.7"	"134.2"	""	"815"	"43"	"36.000"	"29.000"	"0.00224971556506909"	"24"	"0"	"0.0002275"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANNGNLLLR"	"[R].sANnGNLLLR.[N]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	"0.0465"	"0.0000"	"1"	"1"	"1"	"651.37225"	"1301.73723"	"1301.73748"	"-0.19"	"-0.00012"	"7/86"	"7"	"86"	"1243313.60723877"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"58.6827"	"18845"	"18845"	"18826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.3"	""	"66.7"	""	"76.3"	""	"107.7"	"0.3"	"141.5"	"125.5"	""	"815"	"43"	"36.000"	"29.000"	"0.00195041762621475"	"23"	"0"	"0.0001407"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SANNGNLLLR"	"[R].sAnNGNLLLR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"0"	"2"	"2"	""	"0.0465"	"2"	"2"	"2"	"651.37225"	"1301.73723"	"1301.73748"	"-0.19"	"-0.00012"	"7/86"	"7"	"86"	"1243313.60723877"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"58.6827"	"18845"	"18845"	"18826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.3"	""	"66.7"	""	"76.3"	""	"107.7"	"0.3"	"141.5"	"125.5"	""	"815"	"41"	"36.000"	"29.000"	"0.00338943736724339"	"23"	"9.9E-05"	"0.0005095"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETEHK"	"[K].sLETEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"434.58630"	"1301.74436"	"1301.74654"	"-1.67"	"-0.00073"	"9/56"	"9"	"56"	"2927580.96728516"	"HCD"	"MS2"	"41.86707"	"156.6"	"100.000"	"26.9588"	"6001"	"6001"	"5989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.0"	""	"172.6"	""	"172.3"	""	"295.6"	""	"330.6"	"336.4"	""	"775"	"26"	"35.000"	"28.000"	"0.105747889083812"	"18"	"0.001615"	"0.01458"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETEHK"	"[K].sLETEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.58652"	"1301.74500"	"1301.74654"	"-1.18"	"-0.00051"	"7/56"	"7"	"56"	"1743439.14276123"	"HCD"	"MS2"	"42.53174"	"110.4"	"100.000"	"27.0219"	"6062"	"6062"	"6042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.2"	""	"146.5"	""	"140.9"	""	"185.9"	"4.4"	"207.2"	"220.8"	""	"775"	"10"	"35.000"	"28.000"	"3.69208513559165"	"13"	"0.006777"	"0.08391"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETEHK"	"[K].sLETEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"434.58667"	"1301.74546"	"1301.74654"	"-0.83"	"-0.00036"	"7/56"	"7"	"56"	"2129132.6416626"	"HCD"	"MS2"	"24.07004"	"130.5"	"100.000"	"27.2360"	"6110"	"6110"	"6095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.9"	""	"159.1"	""	"177.9"	""	"209.6"	"1.1"	"240.7"	"264.9"	""	"777"	"11"	"35.000"	"28.000"	"3.11451927626113"	"13"	"0.00714"	"0.0917"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETEHK"	"[K].sLETEHk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"434.58731"	"1301.74738"	"1301.74654"	"0.65"	"0.00028"	"9/56"	"9"	"56"	"2572813.60314941"	"HCD"	"MS2"	"46.99376"	"147.7"	"100.000"	"26.7241"	"5948"	"5948"	"5939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.8"	""	"154.2"	""	"163.3"	""	"284.8"	"3.1"	"308.9"	"301.6"	""	"754"	"28"	"35.000"	"28.000"	"0.0578550602515334"	"19"	"0.00307"	"0.03396"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPHVAEK"	"[K].yPHVAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176; P33272; P13107"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B3 OS=Rattus norvegicus OX=10116 GN=Cyp2b3 PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"434.59018"	"1301.75599"	"1301.76179"	"-4.46"	"-0.00194"	"7/48"	"7"	"48"	"6755912.29931641"	"HCD"	"MS2"	"31.63272"	"283.1"	"100.000"	"35.6721"	"9507"	"9507"	"9491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"436.9"	""	"378.1"	""	"391.6"	""	"436.4"	""	"467.1"	"571.7"	""	"838"	"14"	"36.000"	"29.000"	"1.60403567449749"	"18"	"0.004213"	"0.04618"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPHVAEK"	"[K].yPHVAEk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"4"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176; P33272; P13107"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B3 OS=Rattus norvegicus OX=10116 GN=Cyp2b3 PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"434.59045"	"1301.75681"	"1301.76179"	"-3.83"	"-0.00166"	"5/48"	"5"	"48"	"5428239.78771973"	"HCD"	"MS2"	"38.01363"	"253.9"	"100.000"	"35.4632"	"9460"	"9460"	"9435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"388.7"	""	"359.2"	""	"317.4"	""	"382.9"	""	"432.8"	"525.0"	""	"828"	"21"	"36.000"	"29.000"	"0.314775078653235"	"20"	"0.004357"	"0.05122"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.6410"	"0.0000"	"1"	"1"	"1"	"434.59195"	"1301.76130"	"1301.76263"	"-1.03"	"-0.00045"	"9/74"	"9"	"74"	"531562.089050293"	"HCD"	"MS2"	"21.02342"	"10.2"	"100.000"	"103.5620"	"37004"	"37004"	"36978"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.7"	""	"9.9"	""	"13.1"	""	"23.9"	""	"17.8"	"19.5"	""	"838"	"39"	"36.000"	"29.000"	"0.00569133334120018"	"29"	"0.0001991"	"0.002329"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"651.38452"	"1301.76177"	"1301.76263"	"-0.66"	"-0.00043"	"7/74"	"7"	"74"	"842207.264587402"	"HCD"	"MS2"	"44.89783"	"47.4"	"100.000"	"103.3709"	"36927"	"36927"	"36898"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.9"	""	"69.1"	""	"76.1"	""	"86.4"	""	"84.7"	"77.9"	""	"888"	"28"	"36.000"	"29.000"	"0.0678239329857704"	"25"	"0"	"0.0003454"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"651.38464"	"1301.76201"	"1301.76263"	"-0.48"	"-0.00031"	"7/74"	"7"	"74"	"14087072.6941528"	"HCD"	"MS2"	"0"	"453.1"	"76.702"	"103.8882"	"37152"	"37152"	"37134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"676.4"	""	"637.5"	""	"657.3"	""	"720.0"	""	"766.3"	"834.0"	""	"879"	"51"	"36.000"	"29.000"	"0.000381908108671329"	""	"0"	"0.0002459"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"434.59225"	"1301.76221"	"1301.76263"	"-0.32"	"-0.00014"	"11/74"	"11"	"74"	"637963.607421875"	"HCD"	"MS2"	"11.00589"	"11.3"	"100.000"	"103.8605"	"37141"	"37141"	"37118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"15.2"	""	"16.1"	""	"16.4"	""	"19.7"	"22.9"	""	"873"	"40"	"36.000"	"29.000"	"0.00418778375656705"	"27"	"0.0001991"	"0.002275"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"651.38477"	"1301.76225"	"1301.76263"	"-0.29"	"-0.00019"	"6/74"	"6"	"74"	"628353.572937012"	"HCD"	"MS2"	"19.23391"	"34.4"	"100.000"	"103.5938"	"37033"	"37033"	"37015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.3"	""	"43.6"	""	"46.5"	""	"64.9"	"0.8"	"60.4"	"60.3"	""	"873"	"40"	"36.000"	"29.000"	"0.00399010429901764"	"25"	"0"	"8.255E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"651.38483"	"1301.76238"	"1301.76263"	"-0.20"	"-0.00013"	"5/74"	"5"	"74"	"219820.952331543"	"HCD"	"MS2"	"11.77489"	"15.1"	"100.000"	"104.2744"	"37291"	"37291"	"37274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"17.2"	""	"24.6"	""	"24.1"	""	"29.1"	"28.2"	""	"873"	"22"	"36.000"	"29.000"	"0.271009333441423"	"17"	"0.001488"	"0.01257"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"651.38483"	"1301.76238"	"1301.76263"	"-0.20"	"-0.00013"	"7/74"	"7"	"74"	"1410704.24475098"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"104.1954"	"37276"	"37276"	"37258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.1"	""	"87.9"	""	"107.9"	""	"113.1"	"0.5"	"119.2"	"124.1"	""	"873"	"50"	"36.000"	"29.000"	"0.000413984659230842"	""	"0"	"0.0001073"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"651.38489"	"1301.76250"	"1301.76263"	"-0.10"	"-0.00007"	"7/74"	"7"	"74"	"1317726.0279541"	"HCD"	"MS2"	"1.59905"	"65.5"	"100.000"	"103.9627"	"37166"	"37166"	"37149"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.4"	""	"84.1"	""	"103.3"	""	"99.4"	"1.2"	"117.4"	"113.7"	""	"870"	"53"	"36.000"	"29.000"	"0.000226198258492079"	"28"	"0"	"3.522E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"651.38489"	"1301.76250"	"1301.76263"	"-0.10"	"-0.00007"	"7/74"	"7"	"74"	"14333458.8414917"	"HCD"	"MS2"	"0"	"445.6"	"75.950"	"103.6577"	"37043"	"37043"	"37026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"642.8"	""	"619.0"	""	"632.4"	""	"732.7"	""	"787.6"	"805.1"	""	"870"	"49"	"36.000"	"29.000"	"0.000584102758094971"	""	"9.9E-05"	"0.0005168"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLLNIR"	"[R].sEIDLLNIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"651.38507"	"1301.76286"	"1301.76263"	"0.18"	"0.00012"	"5/74"	"5"	"74"	"233309.838806152"	"HCD"	"MS2"	"13.30532"	"15.1"	"100.000"	"104.5077"	"37402"	"37402"	"37385"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"20.0"	""	"21.6"	""	"26.0"	""	"23.4"	"30.5"	""	"869"	"26"	"36.000"	"29.000"	"0.0979466937680231"	"22"	"0.002559"	"0.02605"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYVSDIDCR"	"[R].gYVSDIDcR.[W]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"P19468"	"Glutamate--cysteine ligase catalytic subunit OS=Rattus norvegicus OX=10116 GN=Gclc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.80444"	"1302.60161"	"1302.60197"	"-0.28"	"-0.00018"	"5/70"	"5"	"70"	"203315.258972168"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"72.0795"	"24311"	"24311"	"24282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"18.8"	""	"23.8"	""	"27.7"	"0.6"	"36.3"	"34.7"	""	"253"	"24"	"31.000"	"24.000"	"0.0484273300295781"	"14"	"0.003529"	"0.03859"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVQPEGPYR"	"[K].qVQPEGPYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"651.85339"	"1302.69951"	"1302.70037"	"-0.66"	"-0.00043"	"7/80"	"7"	"80"	"939286.045288086"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"34.5134"	"9040"	"9040"	"9023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.3"	""	"55.6"	""	"71.0"	""	"79.9"	""	"81.5"	"106.7"	""	"790"	"23"	"35.000"	"28.000"	"0.19980074149123"	"17"	"0.001217"	"0.009266"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVQPEGPYR"	"[K].qVQPEGPYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"651.85345"	"1302.69963"	"1302.70037"	"-0.56"	"-0.00037"	"7/80"	"7"	"80"	"905115.44708252"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"34.3871"	"9025"	"9025"	"9000"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	""	"54.7"	""	"66.4"	""	"80.3"	""	"76.6"	"108.4"	""	"786"	"23"	"35.000"	"28.000"	"0.198789092167224"	"17"	"0.0001991"	"0.004036"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"651.86340"	"1302.71953"	"1302.72150"	"-1.51"	"-0.00098"	"7/90"	"7"	"90"	"1124403.66729736"	"HCD"	"MS2"	"14.58598"	"61.5"	"100.000"	"58.7104"	"18892"	"18892"	"18871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.5"	""	"68.8"	""	"62.2"	""	"94.1"	""	"135.2"	"145.4"	""	"811"	"51"	"36.000"	"29.000"	"0.000361402255413234"	"27"	"0"	"8.094E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"651.86371"	"1302.72014"	"1302.72150"	"-1.04"	"-0.00068"	"7/90"	"7"	"90"	"1503734.80853271"	"HCD"	"MS2"	"2.987622"	"79.1"	"100.000"	"59.0188"	"19017"	"19017"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"92.9"	""	"85.9"	""	"116.3"	"0.7"	"165.6"	"181.3"	""	"818"	"48"	"36.000"	"29.000"	"0.000626214771827951"	"27"	"0"	"0.0001195"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLQQLAEER"	"[R].sLQQLAEER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"651.86505"	"1302.72283"	"1302.72150"	"1.02"	"0.00067"	"7/90"	"7"	"90"	"1665551.70379639"	"HCD"	"MS2"	"4.049065"	"85.5"	"100.000"	"59.1615"	"19040"	"19040"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.9"	""	"86.5"	""	"96.1"	""	"123.7"	""	"180.4"	"221.9"	""	"905"	"51"	"36.000"	"29.000"	"0.000335442884188666"	"28"	"0"	"0.0001953"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAQDNPK"	"[K].aTAQDNPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"651.87451"	"1302.74175"	"1302.74179"	"-0.03"	"-0.00002"	"7/70"	"7"	"70"	"556750.152770996"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"24.7566"	"5174"	"5174"	"5149"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.4"	""	"51.1"	""	"61.3"	""	"66.0"	""	"92.9"	"88.0"	""	"892"	"47"	"36.000"	"29.000"	"0.000893994524204862"	""	"0.0001686"	"0.001887"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAQDNPK"	"[K].aTAQDNPk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"Q9JM53"	"Apoptosis-inducing factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aifm1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"651.87451"	"1302.74175"	"1302.74179"	"-0.03"	"-0.00002"	"6/70"	"6"	"70"	"485738.86505127"	"HCD"	"MS2"	"0"	"41.1"	"100.000"	"24.8901"	"5191"	"5191"	"5166"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"51.8"	""	"49.2"	""	"69.3"	""	"75.7"	"82.0"	""	"892"	"21"	"36.000"	"29.000"	"0.33522381073212"	"22"	"0.001718"	"0.01515"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87622"	"1302.74516"	"1302.74665"	"-1.14"	"-0.00074"	"7/76"	"7"	"76"	"1303457.71569824"	"HCD"	"MS2"	"24.73717"	"54.8"	"100.000"	"110.1547"	"39569"	"39569"	"39549"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	""	"73.2"	""	"87.4"	""	"90.3"	""	"92.8"	"103.0"	""	"924"	"68"	"36.000"	"29.000"	"6.60149008832129E-06"	""	"0"	"2.668E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87622"	"1302.74516"	"1302.74665"	"-1.14"	"-0.00074"	"7/74"	"7"	"74"	"1303457.71569824"	"HCD"	"MS2"	"24.73717"	"54.8"	"100.000"	"110.1547"	"39569"	"39569"	"39549"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	""	"73.2"	""	"87.4"	""	"90.3"	""	"92.8"	"103.0"	""	"924"	"68"	"36.000"	"29.000"	"6.60149008832129E-06"	""	"0"	"2.668E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87628"	"1302.74529"	"1302.74665"	"-1.04"	"-0.00068"	"7/76"	"7"	"76"	"1576140.1151123"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"110.3208"	"39650"	"39650"	"39628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.4"	""	"95.3"	""	"89.0"	""	"104.1"	"0.7"	"105.9"	"114.1"	""	"924"	"64"	"36.000"	"29.000"	"1.83080451826013E-05"	""	"0"	"4.529E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87628"	"1302.74529"	"1302.74665"	"-1.04"	"-0.00068"	"7/74"	"7"	"74"	"1576140.1151123"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"110.3208"	"39650"	"39650"	"39628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.4"	""	"95.3"	""	"89.0"	""	"104.1"	"0.7"	"105.9"	"114.1"	""	"924"	"64"	"36.000"	"29.000"	"1.83080451826013E-05"	""	"0"	"4.53E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87653"	"1302.74578"	"1302.74665"	"-0.67"	"-0.00044"	"4/76"	"4"	"76"	"208006.775939941"	"HCD"	"MS2"	"42.21585"	"10.8"	"100.000"	"108.6957"	"39028"	"39028"	"39015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"12.9"	""	"10.8"	""	"21.3"	""	"23.1"	"22.6"	""	"930"	"18"	"36.000"	"29.000"	"0.759369155770866"	"22"	"0.005266"	"0.06733"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87653"	"1302.74578"	"1302.74665"	"-0.67"	"-0.00044"	"4/74"	"4"	"74"	"208006.775939941"	"HCD"	"MS2"	"42.21585"	"10.8"	"100.000"	"108.6957"	"39028"	"39028"	"39015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"12.9"	""	"10.8"	""	"21.3"	""	"23.1"	"22.6"	""	"930"	"18"	"36.000"	"29.000"	"0.759369155770866"	"22"	"0.005266"	"0.06733"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87659"	"1302.74590"	"1302.74665"	"-0.58"	"-0.00038"	"7/76"	"7"	"76"	"404276.125244141"	"HCD"	"MS2"	"25.92614"	"21.0"	"100.000"	"108.0471"	"38771"	"38771"	"38768"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"28.0"	""	"27.0"	""	"33.9"	""	"38.3"	"44.2"	""	"913"	"39"	"36.000"	"29.000"	"0.00637442156822036"	""	"0.0001686"	"0.001049"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87659"	"1302.74590"	"1302.74665"	"-0.58"	"-0.00038"	"7/74"	"7"	"74"	"404276.125244141"	"HCD"	"MS2"	"25.92614"	"21.0"	"100.000"	"108.0471"	"38771"	"38771"	"38768"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"28.0"	""	"27.0"	""	"33.9"	""	"38.3"	"44.2"	""	"913"	"39"	"36.000"	"29.000"	"0.00637442156822036"	""	"0.0001686"	"0.001049"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"434.92017"	"1302.74594"	"1302.74665"	"-0.54"	"-0.00023"	"8/76"	"8"	"76"	"236193.072814941"	"HCD"	"MS2"	"47.78497"	"4.4"	"100.000"	"107.7695"	"38687"	"38687"	"38676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.3"	""	"5.1"	""	"6.6"	""	"8.3"	""	"7.7"	"8.7"	""	"913"	"37"	"36.000"	"29.000"	"0.00934201976664813"	""	"9.9E-05"	"0.0005849"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"434.92017"	"1302.74594"	"1302.74665"	"-0.54"	"-0.00023"	"8/74"	"8"	"74"	"236193.072814941"	"HCD"	"MS2"	"47.78497"	"4.4"	"100.000"	"107.7695"	"38687"	"38687"	"38676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.3"	""	"5.1"	""	"6.6"	""	"8.3"	""	"7.7"	"8.7"	""	"913"	"37"	"36.000"	"29.000"	"0.00934201976664813"	""	"9.9E-05"	"0.0005849"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87665"	"1302.74602"	"1302.74665"	"-0.48"	"-0.00031"	"7/76"	"7"	"76"	"614217.242858887"	"HCD"	"MS2"	"39.01476"	"26.6"	"100.000"	"107.5161"	"38592"	"38592"	"38581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"39.3"	""	"39.9"	""	"37.1"	""	"42.6"	"54.4"	""	"913"	"41"	"36.000"	"29.000"	"0.00365966035936475"	""	"9.9E-05"	"0.000601"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87665"	"1302.74602"	"1302.74665"	"-0.48"	"-0.00031"	"7/74"	"7"	"74"	"614217.242858887"	"HCD"	"MS2"	"39.01476"	"26.6"	"100.000"	"107.5161"	"38592"	"38592"	"38581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"39.3"	""	"39.9"	""	"37.1"	""	"42.6"	"54.4"	""	"913"	"41"	"36.000"	"29.000"	"0.00365966035936475"	""	"9.9E-05"	"0.0006011"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87671"	"1302.74614"	"1302.74665"	"-0.39"	"-0.00025"	"7/76"	"7"	"76"	"891340.465759277"	"HCD"	"MS2"	"27.24486"	"39.0"	"100.000"	"107.2601"	"38473"	"38473"	"38460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.8"	""	"60.6"	""	"55.4"	""	"65.2"	""	"63.6"	"72.4"	""	"913"	"46"	"36.000"	"29.000"	"0.00127186431347949"	""	"0"	"0.0003741"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87671"	"1302.74614"	"1302.74665"	"-0.39"	"-0.00025"	"7/74"	"7"	"74"	"891340.465759277"	"HCD"	"MS2"	"27.24486"	"39.0"	"100.000"	"107.2601"	"38473"	"38473"	"38460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.8"	""	"60.6"	""	"55.4"	""	"65.2"	""	"63.6"	"72.4"	""	"913"	"46"	"36.000"	"29.000"	"0.00127186431347949"	""	"0"	"0.0003741"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87677"	"1302.74626"	"1302.74665"	"-0.29"	"-0.00019"	"6/76"	"6"	"76"	"358759.675537109"	"HCD"	"MS2"	"23.16901"	"20.0"	"100.000"	"108.3084"	"38889"	"38889"	"38880"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"25.4"	""	"25.9"	""	"32.3"	""	"43.4"	"39.0"	""	"913"	"43"	"36.000"	"29.000"	"0.00238473860278098"	""	"9.9E-05"	"0.0008143"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87677"	"1302.74626"	"1302.74665"	"-0.29"	"-0.00019"	"6/74"	"6"	"74"	"358759.675537109"	"HCD"	"MS2"	"23.16901"	"20.0"	"100.000"	"108.3084"	"38889"	"38889"	"38880"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"25.4"	""	"25.9"	""	"32.3"	""	"43.4"	"39.0"	""	"913"	"43"	"36.000"	"29.000"	"0.00238473860278098"	""	"9.9E-05"	"0.0008143"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87689"	"1302.74651"	"1302.74665"	"-0.11"	"-0.00007"	"7/76"	"7"	"76"	"2827820.83166504"	"HCD"	"MS2"	"0.3809318"	"106.4"	"100.000"	"108.0362"	"38788"	"38788"	"38785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.7"	""	"147.7"	""	"144.5"	""	"168.6"	""	"188.7"	"213.5"	""	"912"	"64"	"36.000"	"29.000"	"1.72967633147999E-05"	""	"0"	"4.843E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87689"	"1302.74651"	"1302.74665"	"-0.11"	"-0.00007"	"7/74"	"7"	"74"	"2827820.83166504"	"HCD"	"MS2"	"0.3809318"	"106.4"	"100.000"	"108.0362"	"38788"	"38788"	"38785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.7"	""	"147.7"	""	"144.5"	""	"168.6"	""	"188.7"	"213.5"	""	"912"	"64"	"36.000"	"29.000"	"1.72967633147999E-05"	""	"0"	"4.844E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"434.92038"	"1302.74659"	"1302.74665"	"-0.05"	"-0.00002"	"8/76"	"8"	"76"	"249785.868652344"	"HCD"	"MS2"	"30.14662"	"5.9"	"100.000"	"107.4731"	"38554"	"38554"	"38540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.5"	""	"9.7"	""	"7.7"	""	"7.8"	""	"13.5"	"12.1"	""	"910"	"39"	"36.000"	"29.000"	"0.00578111217869887"	""	"0.0001686"	"0.001541"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"434.92038"	"1302.74659"	"1302.74665"	"-0.05"	"-0.00002"	"8/74"	"8"	"74"	"249785.868652344"	"HCD"	"MS2"	"30.14662"	"5.9"	"100.000"	"107.4731"	"38554"	"38554"	"38540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.5"	""	"9.7"	""	"7.7"	""	"7.8"	""	"13.5"	"12.1"	""	"910"	"39"	"36.000"	"29.000"	"0.00578111217869887"	""	"0.0001686"	"0.001541"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87695"	"1302.74663"	"1302.74665"	"-0.01"	"-0.00001"	"4/76"	"4"	"76"	"176193.320556641"	"HCD"	"MS2"	"50.69173"	"11.4"	"100.000"	"108.4190"	"38909"	"38909"	"38899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"8.6"	""	"15.3"	""	"23.0"	""	"24.3"	"26.6"	""	"910"	"18"	"36.000"	"29.000"	"0.796180243324219"	"21"	"0.00455"	"0.05329"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87695"	"1302.74663"	"1302.74665"	"-0.01"	"-0.00001"	"4/74"	"4"	"74"	"176193.320556641"	"HCD"	"MS2"	"50.69173"	"11.4"	"100.000"	"108.4190"	"38909"	"38909"	"38899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"8.6"	""	"15.3"	""	"23.0"	""	"24.3"	"26.6"	""	"910"	"18"	"36.000"	"29.000"	"0.796180243324219"	"21"	"0.00455"	"0.05329"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87695"	"1302.74663"	"1302.74665"	"-0.01"	"-0.00001"	"7/76"	"7"	"76"	"2215857.18334961"	"HCD"	"MS2"	"0.6159004"	"92.0"	"100.000"	"107.7894"	"38675"	"38675"	"38668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.3"	""	"118.8"	""	"120.2"	""	"148.4"	"0.9"	"172.7"	"183.6"	""	"910"	"69"	"36.000"	"29.000"	"6.25189098630694E-06"	""	"0"	"2.348E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87695"	"1302.74663"	"1302.74665"	"-0.01"	"-0.00001"	"7/74"	"7"	"74"	"2215857.18334961"	"HCD"	"MS2"	"0.6159004"	"92.0"	"100.000"	"107.7894"	"38675"	"38675"	"38668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.3"	""	"118.8"	""	"120.2"	""	"148.4"	"0.9"	"172.7"	"183.6"	""	"910"	"69"	"36.000"	"29.000"	"6.25189098630694E-06"	""	"0"	"2.348E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87762"	"1302.74797"	"1302.74665"	"1.02"	"0.00066"	"7/76"	"7"	"76"	"11943676.0888672"	"HCD"	"MS2"	"0"	"401.6"	"91.121"	"107.5152"	"38570"	"38570"	"38566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"550.4"	""	"519.7"	""	"575.3"	""	"631.6"	""	"735.2"	"795.0"	""	"860"	"64"	"36.000"	"29.000"	"1.60867552956983E-05"	""	"0"	"8.42E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87762"	"1302.74797"	"1302.74665"	"1.02"	"0.00066"	"7/74"	"7"	"74"	"11943676.0888672"	"HCD"	"MS2"	"0"	"401.6"	"91.121"	"107.5152"	"38570"	"38570"	"38566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"550.4"	""	"519.7"	""	"575.3"	""	"631.6"	""	"735.2"	"795.0"	""	"860"	"64"	"36.000"	"29.000"	"1.60867552956983E-05"	""	"0"	"8.42E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIR"	"[R].sEIDLLDIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"651.87769"	"1302.74809"	"1302.74665"	"1.11"	"0.00072"	"7/76"	"7"	"76"	"11072392.3078613"	"HCD"	"MS2"	"0"	"385.5"	"100.000"	"107.7789"	"38691"	"38691"	"38683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"545.1"	""	"530.9"	""	"561.2"	""	"594.9"	""	"707.7"	"716.2"	""	"860"	"69"	"36.000"	"29.000"	"5.8139120217354E-06"	""	"0"	"4.975E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIR"	"[R].sEIDLLnIR.[R]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.87769"	"1302.74809"	"1302.74665"	"1.11"	"0.00072"	"7/74"	"7"	"74"	"11072392.3078613"	"HCD"	"MS2"	"0"	"385.5"	"100.000"	"107.7789"	"38691"	"38691"	"38683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"545.1"	""	"530.9"	""	"561.2"	""	"594.9"	""	"707.7"	"716.2"	""	"860"	"69"	"36.000"	"29.000"	"5.8139120217354E-06"	""	"0"	"4.975E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"651.88196"	"1302.75664"	"1302.75788"	"-0.95"	"-0.00062"	"9/88"	"9"	"88"	"17750167.4740601"	"HCD"	"MS2"	"0"	"501.0"	"67.109"	"66.2562"	"21955"	"21955"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"610.1"	""	"680.0"	""	"735.5"	""	"814.7"	"2.6"	"835.5"	"1069.5"	""	"848"	"63"	"36.000"	"29.000"	"1.99235102048611E-05"	"27"	"0"	"5.354E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"651.88208"	"1302.75688"	"1302.75788"	"-0.77"	"-0.00050"	"9/88"	"9"	"88"	"3264664.21148682"	"HCD"	"MS2"	"0"	"154.8"	"100.000"	"66.5451"	"22070"	"22070"	"22056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.2"	""	"200.6"	""	"228.0"	""	"251.1"	"0.1"	"270.4"	"334.1"	""	"848"	"63"	"36.000"	"29.000"	"2.08144939488704E-05"	"27"	"0"	"3.853E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"651.88208"	"1302.75688"	"1302.75788"	"-0.77"	"-0.00050"	"9/88"	"9"	"88"	"15933736.1759033"	"HCD"	"MS2"	"0"	"553.8"	"83.310"	"66.2644"	"21926"	"21926"	"21909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"680.8"	""	"760.8"	""	"838.8"	""	"868.7"	""	"912.5"	"1190.7"	""	"848"	"61"	"36.000"	"29.000"	"3.14315542311589E-05"	"27"	"0"	"1.664E-06"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"651.88232"	"1302.75737"	"1302.75788"	"-0.39"	"-0.00025"	"9/88"	"9"	"88"	"4142038.29443359"	"HCD"	"MS2"	"1.653509"	"202.3"	"100.000"	"65.9574"	"21833"	"21833"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.6"	""	"269.9"	""	"292.4"	""	"326.1"	"3.1"	"329.4"	"431.9"	""	"906"	"62"	"36.000"	"29.000"	"3.14846015867725E-05"	"24"	"0"	"5.011E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"651.88269"	"1302.75810"	"1302.75788"	"0.17"	"0.00011"	"9/88"	"9"	"88"	"2980149.7322998"	"HCD"	"MS2"	"0"	"141.5"	"100.000"	"66.5415"	"22035"	"22035"	"22023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.2"	""	"180.5"	""	"214.7"	""	"218.6"	"0.8"	"251.4"	"297.3"	""	"901"	"60"	"36.000"	"29.000"	"4.78293848518025E-05"	"23"	"0"	"5.916E-07"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTLDGTLIR"	"[K].gAGTLDGTLIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"651.88312"	"1302.75896"	"1302.75788"	"0.83"	"0.00054"	"9/88"	"9"	"88"	"5076808.01391602"	"HCD"	"MS2"	"1.345437"	"240.4"	"100.000"	"65.9677"	"21804"	"21804"	"21785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.7"	""	"325.7"	""	"357.4"	""	"385.7"	"2.1"	"392.4"	"498.8"	""	"844"	"63"	"36.000"	"29.000"	"2.06211295642676E-05"	"29"	"0"	"1.079E-06"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEDPLVK"	"[R].sGEDPLVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"651.88672"	"1302.76616"	"1302.76694"	"-0.60"	"-0.00039"	"7/62"	"7"	"62"	"1998580.19073486"	"HCD"	"MS2"	"0"	"145.6"	"100.000"	"51.1638"	"15794"	"15794"	"15773"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.4"	""	"169.6"	""	"163.4"	""	"292.6"	"0.9"	"297.7"	"300.7"	""	"796"	"36"	"35.000"	"29.000"	"0.0110887622511465"	"27"	"0.0001991"	"0.003536"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGEDPLVK"	"[R].sGEDPLVk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"P61954"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 OS=Rattus norvegicus OX=10116 GN=Gng11 PE=3 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"651.88678"	"1302.76628"	"1302.76694"	"-0.50"	"-0.00033"	"7/62"	"7"	"62"	"2356483.25671387"	"HCD"	"MS2"	"5.775732"	"166.2"	"100.000"	"50.8727"	"15709"	"15709"	"15686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.2"	""	"191.1"	""	"213.9"	""	"330.2"	""	"361.4"	"314.4"	""	"796"	"16"	"35.000"	"29.000"	"0.899255436547948"	"21"	"0.00455"	"0.05408"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAAVGSK"	"[R].nTPAAVGSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"651.89191"	"1302.77654"	"1302.77817"	"-1.25"	"-0.00082"	"8/92"	"8"	"92"	"619503.874511719"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"33.7654"	"8737"	"8737"	"8712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.4"	""	"64.4"	""	"62.5"	""	"74.7"	""	"90.2"	"99.2"	""	"719"	"45"	"35.000"	"28.000"	"0.00102258376812753"	"25"	"9.9E-05"	"0.0008984"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAAVGSK"	"[R].nTPAAVGSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"651.89191"	"1302.77654"	"1302.77817"	"-1.25"	"-0.00082"	"8/92"	"8"	"92"	"1790353.80419922"	"HCD"	"MS2"	"0"	"122.4"	"100.000"	"33.3425"	"8602"	"8602"	"8577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.7"	""	"154.3"	""	"150.2"	""	"201.7"	""	"223.6"	"248.0"	""	"719"	"44"	"35.000"	"28.000"	"0.00148490576965463"	"26"	"0.0001991"	"0.003652"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAAVGSK"	"[R].nTPAAVGSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.89215"	"1302.77703"	"1302.77817"	"-0.88"	"-0.00057"	"8/92"	"8"	"92"	"391952.461914063"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"33.6846"	"8742"	"8742"	"8713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.9"	""	"36.2"	""	"41.9"	""	"55.9"	""	"63.3"	"81.8"	""	"719"	"46"	"35.000"	"28.000"	"0.000905104855529308"	"15"	"0.0001991"	"0.003577"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEVNQVK"	"[K].gAEVNQVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"651.89264"	"1302.77800"	"1302.77817"	"-0.13"	"-0.00008"	"14/62"	"14"	"62"	"1022846.23352051"	"HCD"	"MS2"	"16.70969"	"93.4"	"100.000"	"34.9931"	"9233"	"9233"	"9216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.0"	""	"124.6"	""	"123.9"	""	"123.3"	""	"189.7"	"204.1"	""	"759"	"52"	"35.000"	"28.000"	"0.000249581149276382"	""	"0"	"0.000306"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEVNQVK"	"[K].gAEVNQVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"651.89294"	"1302.77861"	"1302.77817"	"0.34"	"0.00022"	"7/62"	"7"	"62"	"707457.260559082"	"HCD"	"MS2"	"14.52665"	"63.9"	"100.000"	"34.9334"	"9247"	"9247"	"9226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.5"	""	"83.8"	""	"91.9"	""	"86.8"	""	"122.2"	"133.9"	""	"754"	"46"	"35.000"	"28.000"	"0.000931840002671081"	"28"	"0.0001686"	"0.001077"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPAAVGSK"	"[R].nTPAAVGSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"651.89337"	"1302.77947"	"1302.77817"	"0.99"	"0.00065"	"8/92"	"8"	"92"	"1090523.01397705"	"HCD"	"MS2"	"100"	"83.8"	"100.000"	"33.4345"	"8602"	"8602"	"8572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.3"	""	"108.2"	""	"105.6"	""	"132.8"	""	"159.9"	"161.8"	""	"766"	"29"	"35.000"	"28.000"	"0.0459408233106212"	"17"	"0.001049"	"0.008556"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVIDIK"	"[R].qEVIDIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"651.90491"	"1302.80254"	"1302.80332"	"-0.60"	"-0.00039"	"12/66"	"12"	"66"	"679855.742370605"	"HCD"	"MS2"	"23.59031"	"60.1"	"100.000"	"70.4000"	"23634"	"23634"	"23616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.9"	""	"88.9"	"1.9"	"80.5"	""	"92.4"	""	"102.6"	"113.9"	""	"608"	"37"	"34.000"	"27.000"	"0.00666612700346536"	""	"0.0001991"	"0.004192"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLEEVIK"	"[K].nLEEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"651.90521"	"1302.80315"	"1302.80332"	"-0.13"	"-0.00009"	"6/62"	"6"	"62"	"340136.541259766"	"HCD"	"MS2"	"51.3299"	"30.6"	"100.000"	"79.0893"	"27124"	"27124"	"27099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.4"	""	"35.8"	""	"38.3"	""	"50.1"	""	"64.4"	"61.8"	""	"607"	"18"	"34.000"	"27.000"	"0.517796005062448"	""	"0.002588"	"0.0268"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEEVIK"	"[K].nLEEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"651.90527"	"1302.80327"	"1302.80332"	"-0.04"	"-0.00003"	"12/62"	"12"	"62"	"1233188.85412598"	"HCD"	"MS2"	"2.080985"	"95.1"	"100.000"	"79.3939"	"27247"	"27247"	"27233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.6"	""	"134.0"	""	"129.7"	""	"151.0"	""	"181.9"	"171.2"	""	"605"	"36"	"34.000"	"27.000"	"0.00779337149993279"	""	"0.0005161"	"0.006501"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEEVIK"	"[K].nLEEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"651.90533"	"1302.80339"	"1302.80332"	"0.05"	"0.00003"	"5/62"	"5"	"62"	"582012.460510254"	"HCD"	"MS2"	"15.41909"	"39.4"	"100.000"	"79.7097"	"27376"	"27376"	"27353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.0"	""	"47.7"	""	"59.5"	""	"67.2"	""	"73.5"	"73.3"	""	"605"	"10"	"34.000"	"27.000"	"2.86896585148521"	"19"	"0.004819"	"0.05744"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVIDIK"	"[R].qEVIDIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"651.90546"	"1302.80364"	"1302.80332"	"0.24"	"0.00016"	"12/66"	"12"	"66"	"447180.50201416"	"HCD"	"MS2"	"9.698344"	"39.0"	"100.000"	"70.1075"	"23516"	"23516"	"23497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"64.4"	""	"53.0"	""	"72.4"	"0.7"	"55.3"	"60.0"	""	"605"	"37"	"34.000"	"27.000"	"0.00633469017894895"	""	"0.0001991"	"0.002853"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVIDIK"	"[R].qEVIDIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"651.90564"	"1302.80400"	"1302.80332"	"0.52"	"0.00034"	"6/66"	"6"	"66"	"481673.595458984"	"HCD"	"MS2"	"35.4386"	"42.9"	"100.000"	"70.4007"	"23601"	"23601"	"23582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.0"	""	"59.1"	""	"67.8"	""	"62.0"	""	"71.0"	"79.4"	""	"606"	"32"	"34.000"	"27.000"	"0.020438199239247"	""	"0.0001991"	"0.003361"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVIDIK"	"[R].qEVIDIk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"651.90570"	"1302.80412"	"1302.80332"	"0.62"	"0.00040"	"12/66"	"12"	"66"	"602435.767700195"	"HCD"	"MS2"	"16.93665"	"54.5"	"100.000"	"70.0872"	"23474"	"23474"	"23448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.4"	""	"72.7"	""	"74.1"	""	"87.2"	""	"92.0"	"93.5"	""	"601"	"40"	"34.000"	"27.000"	"0.00333307031986352"	""	"0.0001686"	"0.001442"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEEVIK"	"[K].nLEEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.4872"	"0.0000"	"1"	"1"	"1"	"651.90576"	"1302.80425"	"1302.80332"	"0.71"	"0.00046"	"12/62"	"12"	"62"	"395520.59979248"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"79.2296"	"27208"	"27208"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"43.2"	""	"45.3"	""	"53.8"	""	"59.6"	"57.6"	""	"575"	"39"	"34.000"	"27.000"	"0.00368670042513606"	""	"0.0001686"	"0.001778"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEEVIK"	"[K].nLEEVIk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"Q8K4D8"	"Aldehyde dehydrogenase family 1 member A3 OS=Rattus norvegicus OX=10116 GN=Aldh1a3 PE=2 SV=1"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"651.90613"	"1302.80498"	"1302.80332"	"1.27"	"0.00083"	"12/62"	"12"	"62"	"1322713.75006104"	"HCD"	"MS2"	"0"	"105.8"	"100.000"	"79.5454"	"27336"	"27336"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.6"	""	"144.5"	""	"162.8"	""	"171.7"	"0.0"	"183.7"	"192.7"	""	"593"	"38"	"34.000"	"27.000"	"0.00492067518055237"	""	"0.0001991"	"0.004575"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"652.34540"	"1303.68352"	"1303.68438"	"-0.66"	"-0.00043"	"7/68"	"7"	"68"	"1638955.16741943"	"HCD"	"MS2"	"6.635977"	"86.6"	"100.000"	"70.9760"	"23866"	"23866"	"23852"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.3"	""	"109.3"	""	"104.9"	""	"132.3"	""	"175.8"	"183.5"	""	"745"	"48"	"35.000"	"28.000"	"0.000650318751962888"	"25"	"0"	"0.000192"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"652.34601"	"1303.68474"	"1303.68438"	"0.28"	"0.00018"	"7/68"	"7"	"68"	"1544914.99285889"	"HCD"	"MS2"	"4.323287"	"87.1"	"100.000"	"71.1911"	"23922"	"23922"	"23902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.2"	""	"106.5"	""	"98.0"	""	"141.0"	""	"183.9"	"189.7"	""	"754"	"46"	"35.000"	"28.000"	"0.00101237485601326"	"28"	"0"	"7.789E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"652.34601"	"1303.68474"	"1303.68438"	"0.28"	"0.00018"	"7/68"	"7"	"68"	"1582265.77252197"	"HCD"	"MS2"	"6.205946"	"86.1"	"100.000"	"70.8869"	"23798"	"23798"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.3"	""	"119.2"	""	"104.4"	""	"145.3"	""	"171.3"	"178.3"	""	"754"	"46"	"35.000"	"28.000"	"0.00105278902814648"	"22"	"0"	"0.0001639"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALWEDEGVR"	"[K].aLWEDEGVR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095; Q63803"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1; Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=3"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"652.34613"	"1303.68498"	"1303.68438"	"0.46"	"0.00030"	"7/68"	"7"	"68"	"1580031.21099854"	"HCD"	"MS2"	"6.756075"	"84.4"	"100.000"	"71.2643"	"23983"	"23983"	"23964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.6"	""	"103.8"	""	"104.6"	""	"130.7"	"0.5"	"179.8"	"187.4"	""	"752"	"48"	"35.000"	"28.000"	"0.000654919384395246"	""	"0"	"0.0001497"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"652.35907"	"1303.71086"	"1303.71674"	"-4.51"	"-0.00294"	"8/80"	"8"	"80"	"3601504.98919678"	"HCD"	"MS2"	"46.97108"	"205.1"	"100.000"	"39.2851"	"11009"	"11009"	"10990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"359.5"	""	"242.1"	""	"234.8"	""	"360.0"	""	"394.6"	"353.7"	""	"933"	"26"	"36.000"	"29.000"	"0.118536376713875"	"24"	"0.0001991"	"0.002359"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQQNSSR"	"[R].iLEQQNSSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"652.36115"	"1303.71501"	"1303.71674"	"-1.33"	"-0.00087"	"7/84"	"7"	"84"	"1372780.55303955"	"HCD"	"MS2"	"25.29117"	"83.9"	"100.000"	"32.8761"	"8412"	"8412"	"8391"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.1"	""	"98.2"	""	"100.1"	""	"139.8"	""	"169.4"	"156.2"	""	"894"	"42"	"36.000"	"29.000"	"0.00287943661685284"	""	"0"	"0.0003635"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"652.36115"	"1303.71501"	"1303.71674"	"-1.33"	"-0.00087"	"8/80"	"8"	"80"	"3594612.82232666"	"HCD"	"MS2"	"32.2022"	"205.0"	"100.000"	"39.3693"	"11007"	"11007"	"10997"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"336.1"	""	"231.0"	""	"230.3"	""	"387.8"	""	"393.2"	"365.0"	""	"894"	"26"	"36.000"	"29.000"	"0.113320249783256"	"23"	"0.0001686"	"0.001833"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"652.36127"	"1303.71526"	"1303.71674"	"-1.14"	"-0.00074"	"8/80"	"8"	"80"	"808321.499084473"	"HCD"	"MS2"	"15.30962"	"60.2"	"100.000"	"39.6832"	"11134"	"11134"	"11112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.5"	""	"66.9"	""	"70.9"	""	"104.5"	""	"121.2"	"121.7"	""	"891"	"25"	"36.000"	"29.000"	"0.13767266151848"	"22"	"0.0001991"	"0.002003"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"652.36133"	"1303.71538"	"1303.71674"	"-1.05"	"-0.00068"	"8/96"	"8"	"96"	"1043452.24645996"	"HCD"	"MS2"	"0"	"63.6"	"100.000"	"35.1282"	"9325"	"9325"	"9304"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.8"	""	"78.3"	""	"89.1"	""	"92.7"	""	"120.4"	"144.7"	""	"883"	"45"	"36.000"	"29.000"	"0.00154145449283796"	"27"	"0"	"4.053E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQQNSSR"	"[R].iLEQQNSSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"652.36145"	"1303.71562"	"1303.71674"	"-0.86"	"-0.00056"	"6/84"	"6"	"84"	"1349639.17919922"	"HCD"	"MS2"	"25.36661"	"82.2"	"100.000"	"32.9753"	"8415"	"8415"	"8393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.4"	""	"96.2"	""	"95.7"	""	"133.9"	""	"166.2"	"153.5"	""	"882"	"32"	"36.000"	"29.000"	"0.0307920490198033"	""	"9.9E-05"	"0.0005667"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"652.36157"	"1303.71587"	"1303.71674"	"-0.67"	"-0.00044"	"8/96"	"8"	"96"	"1218220.190979"	"HCD"	"MS2"	"0"	"67.9"	"100.000"	"35.2683"	"9344"	"9344"	"9325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"81.0"	""	"85.6"	""	"96.3"	"1.7"	"125.2"	"151.8"	""	"997"	"48"	"36.000"	"29.000"	"0.000747592890497933"	"26"	"0"	"3.009E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQQNSSR"	"[R].iLEQQNSSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"652.36188"	"1303.71648"	"1303.71674"	"-0.20"	"-0.00013"	"5/84"	"5"	"84"	"291423.755554199"	"HCD"	"MS2"	"19.6372"	"27.2"	"100.000"	"33.2022"	"8545"	"8545"	"8521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"31.4"	""	"43.6"	""	"46.1"	""	"47.8"	"50.4"	""	"989"	"12"	"36.000"	"29.000"	"3.40538560542244"	"24"	"0.004713"	"0.05538"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"652.36188"	"1303.71648"	"1303.71674"	"-0.20"	"-0.00013"	"8/96"	"8"	"96"	"1011227.72705078"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"35.4220"	"9443"	"9443"	"9421"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.5"	""	"67.8"	""	"68.0"	""	"79.1"	""	"106.1"	"128.3"	""	"989"	"50"	"36.000"	"29.000"	"0.000548486946147257"	"27"	"0"	"1.408E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSLGETAQR"	"[K].vNSLGETAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"652.36194"	"1303.71660"	"1303.71674"	"-0.11"	"-0.00007"	"7/96"	"7"	"96"	"634340.905639648"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"35.5850"	"9472"	"9472"	"9447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.2"	""	"54.3"	""	"51.1"	""	"52.1"	""	"79.3"	"84.2"	""	"989"	"40"	"36.000"	"29.000"	"0.00462558105865964"	"24"	"0"	"6.584E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITITNDQNR"	"[K].iTITNDQNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"652.36218"	"1303.71709"	"1303.71674"	"0.26"	"0.00017"	"8/80"	"8"	"80"	"939362.411865234"	"HCD"	"MS2"	"33.77314"	"65.7"	"100.000"	"39.5738"	"11124"	"11124"	"11108"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.9"	""	"72.8"	""	"70.5"	""	"119.9"	"0.4"	"133.4"	"120.8"	""	"988"	"24"	"36.000"	"29.000"	"0.198028158507888"	"22"	"9.9E-05"	"0.0006735"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQQNSSR"	"[R].iLEQQNSSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"652.36249"	"1303.71770"	"1303.71674"	"0.73"	"0.00048"	"6/84"	"6"	"84"	"322327.215454102"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"33.2899"	"8543"	"8543"	"8519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.2"	""	"35.6"	""	"31.1"	""	"38.6"	""	"48.3"	"49.8"	""	"980"	"27"	"36.000"	"29.000"	"0.106462357764324"	"29"	"0.001488"	"0.01198"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQVDPQK"	"[R].mQVDPQk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"652.37500"	"1303.74272"	"1303.74443"	"-1.31"	"-0.00085"	"12/58"	"12"	"58"	"1434219.58441162"	"HCD"	"MS2"	"29.96398"	"118.6"	"100.000"	"45.0054"	"13294"	"13294"	"13274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.1"	""	"159.8"	""	"161.4"	""	"151.6"	"1.6"	"241.8"	"247.0"	""	"932"	"24"	"36.000"	"29.000"	"0.176760782997736"	"20"	"0.002525"	"0.02486"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQEAVK"	"[K].eAAQEAVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"652.38361"	"1303.75994"	"1303.76219"	"-1.73"	"-0.00113"	"7/72"	"7"	"72"	"667681.59552002"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"32.6212"	"8271"	"8271"	"8256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.2"	""	"66.8"	""	"73.3"	""	"101.2"	""	"111.2"	"113.2"	""	"793"	"33"	"35.000"	"28.000"	"0.0212933107260805"	"23"	"0.0001686"	"0.001195"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGGDVQK"	"[K].eIGGDVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"652.38458"	"1303.76189"	"1303.76219"	"-0.23"	"-0.00015"	"12/66"	"12"	"66"	"8733882.42834473"	"HCD"	"MS2"	"11.18847"	"674.9"	"100.000"	"44.1614"	"12951"	"12951"	"12929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1222.0"	""	"800.9"	""	"867.6"	""	"1068.1"	""	"1254.4"	"1179.9"	""	"805"	"37"	"36.000"	"29.000"	"0.00727387585719398"	""	"0.0001991"	"0.003708"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGGDVQK"	"[K].eIGGDVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"652.38507"	"1303.76286"	"1303.76219"	"0.52"	"0.00034"	"12/66"	"12"	"66"	"7618399.09674072"	"HCD"	"MS2"	"14.11209"	"562.7"	"100.000"	"43.9369"	"12895"	"12895"	"12874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1049.7"	""	"692.0"	""	"704.5"	""	"907.4"	""	"1025.6"	"949.1"	""	"804"	"37"	"36.000"	"29.000"	"0.0072815871723308"	""	"0.0001991"	"0.003356"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEAEQLK"	"[RK].qEAEQLk.[NK]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P52287"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus OX=10116 GN=Gnb3 PE=1 SV=1"	"0"	"2"	"2"	"0.2333"	"0.0000"	"1"	"1"	"1"	"652.38519"	"1303.76311"	"1303.76219"	"0.71"	"0.00046"	"5/64"	"5"	"64"	"554660.005615234"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"37.1757"	"10153"	"10153"	"10131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.8"	""	"49.1"	""	"46.9"	""	"106.2"	"0.7"	"121.6"	"111.6"	""	"769"	"30"	"35.000"	"28.000"	"0.0367194649325242"	""	"0.001596"	"0.01304"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAQEAVK"	"[K].eAAQEAVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"652.38538"	"1303.76348"	"1303.76219"	"0.99"	"0.00064"	"7/72"	"7"	"72"	"682469.069152832"	"HCD"	"MS2"	"0"	"54.7"	"100.000"	"32.5226"	"8268"	"8268"	"8241"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.1"	""	"53.3"	""	"54.3"	""	"104.0"	"0.5"	"111.8"	"104.7"	""	"793"	"45"	"35.000"	"28.000"	"0.00133734417883242"	""	"0"	"0.0001817"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"435.26685"	"1303.78598"	"1303.78734"	"-1.04"	"-0.00045"	"5/56"	"5"	"56"	"484036.21282959"	"HCD"	"MS2"	"16.20736"	"21.9"	"100.000"	"105.7096"	"37861"	"37861"	"37843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"23.3"	""	"25.6"	""	"41.6"	""	"53.2"	"47.2"	""	"752"	"23"	"35.000"	"28.000"	"0.180379776687395"	""	"0.004314"	"0.05063"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"435.26685"	"1303.78598"	"1303.78734"	"-1.04"	"-0.00045"	"5/62"	"5"	"62"	"484036.21282959"	"HCD"	"MS2"	"16.20736"	"21.9"	"100.000"	"105.7096"	"37861"	"37861"	"37843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"23.3"	""	"25.6"	""	"41.6"	""	"53.2"	"47.2"	""	"752"	"23"	"35.000"	"28.000"	"0.180379776687395"	""	"0.004314"	"0.05063"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39679"	"1303.78630"	"1303.78734"	"-0.79"	"-0.00052"	"10/56"	"10"	"56"	"231921.200012207"	"HCD"	"MS2"	"11.01645"	"21.1"	"100.000"	"106.0779"	"38006"	"38006"	"37998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"21.7"	""	"27.9"	""	"43.7"	"0.8"	"45.0"	"42.2"	""	"752"	"25"	"35.000"	"28.000"	"0.129475573967015"	"27"	"0.001453"	"0.0116"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39679"	"1303.78630"	"1303.78734"	"-0.80"	"-0.00052"	"10/62"	"10"	"62"	"231921.200012207"	"HCD"	"MS2"	"11.01645"	"21.1"	"100.000"	"106.0779"	"38006"	"38006"	"37998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"21.7"	""	"27.9"	""	"43.7"	"0.8"	"45.0"	"42.2"	""	"752"	"25"	"35.000"	"28.000"	"0.129475573967015"	"27"	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39703"	"1303.78679"	"1303.78734"	"-0.42"	"-0.00027"	"10/56"	"10"	"56"	"850200.610839844"	"HCD"	"MS2"	"18.8984"	"36.7"	"100.000"	"105.7472"	"37894"	"37894"	"37875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.0"	""	"41.2"	""	"43.2"	""	"69.8"	""	"81.9"	"77.4"	""	"722"	"24"	"35.000"	"28.000"	"0.154350201900722"	"27"	"0.001348"	"0.0115"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39703"	"1303.78679"	"1303.78734"	"-0.42"	"-0.00027"	"10/62"	"10"	"62"	"850200.610839844"	"HCD"	"MS2"	"18.8984"	"36.7"	"100.000"	"105.7472"	"37894"	"37894"	"37875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.0"	""	"41.2"	""	"43.2"	""	"69.8"	""	"81.9"	"77.4"	""	"722"	"24"	"35.000"	"28.000"	"0.154350201900722"	"27"	"0.001348"	"0.0115"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"435.26712"	"1303.78681"	"1303.78734"	"-0.41"	"-0.00018"	"5/56"	"5"	"56"	"465630.334350586"	"HCD"	"MS2"	"23.65034"	"21.6"	"100.000"	"105.9648"	"37981"	"37981"	"37967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.9"	""	"23.3"	""	"25.0"	""	"37.1"	""	"50.3"	"47.4"	""	"722"	"23"	"35.000"	"28.000"	"0.180097299973064"	""	"0.004213"	"0.04713"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"435.26712"	"1303.78681"	"1303.78734"	"-0.41"	"-0.00018"	"5/62"	"5"	"62"	"465630.334350586"	"HCD"	"MS2"	"23.65034"	"21.6"	"100.000"	"105.9648"	"37981"	"37981"	"37967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.9"	""	"23.3"	""	"25.0"	""	"37.1"	""	"50.3"	"47.4"	""	"722"	"23"	"35.000"	"28.000"	"0.180097299973064"	""	"0.004213"	"0.04713"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39709"	"1303.78691"	"1303.78734"	"-0.33"	"-0.00021"	"6/56"	"6"	"56"	"970318.085144043"	"HCD"	"MS2"	"0"	"75.8"	"100.000"	"105.4924"	"37774"	"37774"	"37759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.8"	""	"77.0"	""	"84.9"	""	"155.5"	""	"167.8"	"156.8"	""	"722"	"34"	"35.000"	"28.000"	"0.0139800009816704"	""	"0.0001991"	"0.004415"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39709"	"1303.78691"	"1303.78734"	"-0.33"	"-0.00021"	"6/62"	"6"	"62"	"970318.085144043"	"HCD"	"MS2"	"0"	"75.8"	"100.000"	"105.4924"	"37774"	"37774"	"37759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.8"	""	"77.0"	""	"84.9"	""	"155.5"	""	"167.8"	"156.8"	""	"722"	"34"	"35.000"	"28.000"	"0.0139800009816704"	""	"0.0001991"	"0.004415"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39752"	"1303.78777"	"1303.78734"	"0.33"	"0.00021"	"12/56"	"12"	"56"	"2996230.18151855"	"HCD"	"MS2"	"0"	"233.7"	"100.000"	"106.0573"	"38019"	"38019"	"38004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.8"	""	"221.0"	""	"277.3"	""	"392.2"	""	"595.2"	"523.9"	""	"739"	"36"	"35.000"	"28.000"	"0.00829114370837731"	""	"0.001406"	"0.01156"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39752"	"1303.78777"	"1303.78734"	"0.33"	"0.00021"	"12/62"	"12"	"62"	"2996230.18151855"	"HCD"	"MS2"	"0"	"233.7"	"100.000"	"106.0573"	"38019"	"38019"	"38004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.8"	""	"221.0"	""	"277.3"	""	"392.2"	""	"595.2"	"523.9"	""	"739"	"36"	"35.000"	"28.000"	"0.00829114370837731"	""	"0.001453"	"0.01156"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39758"	"1303.78789"	"1303.78734"	"0.42"	"0.00028"	"6/56"	"6"	"56"	"253231.759399414"	"HCD"	"MS2"	"4.88779"	"22.7"	"100.000"	"106.3261"	"38124"	"38124"	"38114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"22.1"	""	"24.4"	""	"41.8"	""	"53.0"	"58.4"	""	"739"	"36"	"35.000"	"28.000"	"0.00900771097387253"	""	"0.0001991"	"0.004991"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39758"	"1303.78789"	"1303.78734"	"0.42"	"0.00028"	"6/62"	"6"	"62"	"253231.759399414"	"HCD"	"MS2"	"4.88779"	"22.7"	"100.000"	"106.3261"	"38124"	"38124"	"38114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"22.1"	""	"24.4"	""	"41.8"	""	"53.0"	"58.4"	""	"739"	"36"	"35.000"	"28.000"	"0.00900771097387253"	""	"0.0001991"	"0.004991"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLLEDLK"	"[R].dLLEDLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.39758"	"1303.78789"	"1303.78734"	"0.42"	"0.00028"	"12/56"	"12"	"56"	"3343342.19464111"	"HCD"	"MS2"	"0"	"260.9"	"100.000"	"105.7931"	"37895"	"37895"	"37878"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.6"	""	"276.8"	""	"294.4"	""	"470.2"	""	"617.2"	"594.7"	""	"739"	"38"	"35.000"	"28.000"	"0.00540274465961757"	""	"0.001488"	"0.01207"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLLQDLK"	"[].dLLqDLk.[]"	"N-Term(TMT6plex); Q4(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.39758"	"1303.78789"	"1303.78734"	"0.42"	"0.00028"	"12/62"	"12"	"62"	"3343342.19464111"	"HCD"	"MS2"	"0"	"260.9"	"100.000"	"105.7931"	"37895"	"37895"	"37878"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.6"	""	"276.8"	""	"294.4"	""	"470.2"	""	"617.2"	"594.7"	""	"739"	"38"	"35.000"	"28.000"	"0.00540274465961757"	""	"0.001488"	"0.01207"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADNLIK"	"[K].aTADNLIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"652.40186"	"1303.79643"	"1303.79857"	"-1.64"	"-0.00107"	"7/66"	"7"	"66"	"346862.861450195"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"56.9100"	"18123"	"18123"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	""	"35.7"	""	"39.7"	""	"62.4"	"1.0"	"68.0"	"66.1"	""	"693"	"28"	"35.000"	"28.000"	"0.0547902445607188"	"26"	"0.0001991"	"0.003565"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAEVLANK"	"[R].tAEVLANk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"435.27036"	"1303.79651"	"1303.79857"	"-1.58"	"-0.00069"	"8/62"	"8"	"62"	"1268808.57653809"	"HCD"	"MS2"	"31.41289"	"58.4"	"100.000"	"51.6511"	"16022"	"16022"	"15999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.7"	""	"61.8"	""	"74.1"	""	"105.5"	"0.7"	"117.3"	"113.7"	""	"693"	"20"	"35.000"	"28.000"	"0.327117093633072"	"26"	"0.003357"	"0.03742"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADNLIK"	"[K].aTADNLIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"652.40192"	"1303.79656"	"1303.79857"	"-1.55"	"-0.00101"	"7/66"	"7"	"66"	"1373186.39404297"	"HCD"	"MS2"	"0"	"118.7"	"100.000"	"55.9714"	"17779"	"17779"	"17763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.1"	""	"123.7"	""	"145.7"	""	"215.0"	"0.0"	"241.6"	"241.4"	""	"693"	"47"	"35.000"	"28.000"	"0.000751109472320024"	""	"0.0001686"	"0.00109"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAEVLANK"	"[R].tAEVLANk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"435.27042"	"1303.79670"	"1303.79857"	"-1.44"	"-0.00063"	"8/62"	"8"	"62"	"1383553.12341309"	"HCD"	"MS2"	"47.03053"	"66.5"	"100.000"	"51.8783"	"16080"	"16080"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.8"	""	"75.1"	""	"83.8"	""	"116.0"	""	"128.3"	"145.1"	""	"691"	"24"	"35.000"	"28.000"	"0.149433528622596"	""	"0.001261"	"0.009926"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADNLIK"	"[K].aTADNLIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.5957"	"0.0000"	"1"	"1"	"1"	"652.40216"	"1303.79704"	"1303.79857"	"-1.17"	"-0.00076"	"7/66"	"7"	"66"	"1664382.25244141"	"HCD"	"MS2"	"9.172879"	"131.6"	"100.000"	"56.2739"	"17901"	"17901"	"17882"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.6"	""	"156.8"	""	"166.6"	""	"242.3"	""	"249.1"	"275.2"	""	"691"	"47"	"35.000"	"28.000"	"0.000638922307856927"	""	"9.9E-05"	"0.0008951"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADNLIK"	"[K].aTADNLIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"652.40222"	"1303.79717"	"1303.79857"	"-1.08"	"-0.00070"	"7/66"	"7"	"66"	"1474472.53912354"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"56.2916"	"17874"	"17874"	"17857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.1"	""	"133.5"	""	"148.7"	""	"236.2"	"0.0"	"235.8"	"236.1"	""	"691"	"47"	"35.000"	"28.000"	"0.000740368702686981"	""	"0.0001686"	"0.001565"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADNLIK"	"[K].aTADNLIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"652.40228"	"1303.79729"	"1303.79857"	"-0.98"	"-0.00064"	"7/66"	"7"	"66"	"1652647.7220459"	"HCD"	"MS2"	"0"	"130.4"	"100.000"	"56.5894"	"17993"	"17993"	"17983"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.4"	""	"136.3"	""	"176.3"	""	"244.6"	""	"242.9"	"286.4"	""	"691"	"45"	"35.000"	"28.000"	"0.00105547524461596"	""	"9.9E-05"	"0.0005339"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADNLIK"	"[K].aTADNLIk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"652.40240"	"1303.79753"	"1303.79857"	"-0.80"	"-0.00052"	"6/66"	"6"	"66"	"351050.898010254"	"HCD"	"MS2"	"37.34892"	"31.7"	"100.000"	"56.6337"	"18046"	"18046"	"18025"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.2"	""	"34.3"	""	"38.9"	""	"58.9"	"0.0"	"60.5"	"70.7"	""	"691"	"15"	"35.000"	"28.000"	"1.21744135945179"	"24"	"0.001999"	"0.01742"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAEVLANK"	"[R].tAEVLANk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"652.40320"	"1303.79912"	"1303.79857"	"0.42"	"0.00027"	"7/62"	"7"	"62"	"2007957.52044678"	"HCD"	"MS2"	"42.78084"	"171.0"	"100.000"	"51.5263"	"15971"	"15971"	"15951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.7"	""	"196.7"	""	"217.0"	""	"318.7"	""	"342.4"	"348.8"	""	"678"	"46"	"35.000"	"28.000"	"0.000916641885432898"	""	"9.9E-05"	"0.0008374"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAEVLANK"	"[R].tAEVLANk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"652.40332"	"1303.79936"	"1303.79857"	"0.61"	"0.00040"	"7/62"	"7"	"62"	"1872587.00646973"	"HCD"	"MS2"	"46.98358"	"125.7"	"100.000"	"51.8003"	"16048"	"16048"	"16033"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.5"	""	"148.5"	""	"151.8"	""	"236.7"	"0.7"	"252.3"	"250.0"	""	"670"	"44"	"35.000"	"28.000"	"0.00146232803800455"	""	"0.0001686"	"0.001222"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQHIDYR"	"[K].mLQHIDYR.[M]"	"N-Term(TMT6plex)"	"1"	"2"	"P63164"	"Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"P17136; P63164"	"Small nuclear ribonucleoprotein-associated protein B OS=Rattus norvegicus OX=10116 GN=Snrpb PE=2 SV=2; Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"435.57065"	"1304.69739"	"1304.69826"	"-0.66"	"-0.00029"	"6/66"	"6"	"66"	"2920772.48028564"	"HCD"	"MS2"	"9.695376"	"55.5"	"100.000"	"47.9913"	"14502"	"14502"	"14481"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.6"	""	"58.3"	""	"67.0"	""	"71.0"	""	"126.0"	"127.6"	""	"814"	"31"	"36.000"	"29.000"	"0.0339308242140191"	"20"	"0.0004582"	"0.006457"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGESESNLR"	"[K].lAGESESNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"652.85370"	"1304.70012"	"1304.70076"	"-0.49"	"-0.00032"	"8/82"	"8"	"82"	"1640038.7208252"	"HCD"	"MS2"	"8.174026"	"98.4"	"100.000"	"38.6292"	"10707"	"10707"	"10686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.7"	""	"121.6"	""	"141.4"	""	"153.8"	"0.6"	"186.7"	"182.2"	""	"870"	"46"	"36.000"	"29.000"	"0.0011258726180916"	"22"	"0"	"2.289E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGESESNLR"	"[K].lAGESESNLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"652.85370"	"1304.70012"	"1304.70076"	"-0.49"	"-0.00032"	"8/82"	"8"	"82"	"1522797.83929443"	"HCD"	"MS2"	"16.66578"	"91.5"	"100.000"	"38.4981"	"10690"	"10690"	"10660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.9"	""	"121.0"	""	"118.8"	""	"144.5"	"0.1"	"167.9"	"171.9"	""	"870"	"48"	"36.000"	"29.000"	"0.000636047070888672"	"21"	"0"	"2.225E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALMLDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"652.85712"	"1304.70696"	"1304.70815"	"-0.92"	"-0.00060"	"6/78"	"6"	"78"	"386532.260986328"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"109.9693"	"39508"	"39508"	"39485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"28.0"	""	"29.9"	""	"32.5"	""	"32.9"	"52.6"	""	"848"	"45"	"36.000"	"29.000"	"0.00141372799011612"	"27"	"0.0001991"	"0.00217"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALMLDR"	"[K].dLEALMLDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"652.85748"	"1304.70769"	"1304.70815"	"-0.36"	"-0.00023"	"6/78"	"6"	"78"	"314901.17791748"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"109.7518"	"39408"	"39408"	"39398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"21.4"	""	"27.3"	""	"20.8"	""	"25.3"	"42.4"	""	"847"	"46"	"36.000"	"29.000"	"0.0010276693752674"	"26"	"0.0001991"	"0.002709"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"652.87085"	"1304.73442"	"1304.73715"	"-2.09"	"-0.00136"	"10/90"	"10"	"90"	"2457628.73297119"	"HCD"	"MS2"	"0"	"114.3"	"100.000"	"30.4166"	"7390"	"7390"	"7371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.6"	""	"143.0"	""	"160.9"	""	"203.3"	"2.9"	"196.6"	"203.4"	""	"897"	"43"	"36.000"	"29.000"	"0.00202657391052152"	"19"	"0"	"1.608E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5370"	"0.0000"	"1"	"1"	"1"	"652.87183"	"1304.73638"	"1304.73715"	"-0.59"	"-0.00038"	"8/100"	"8"	"100"	"8287788.11395264"	"HCD"	"MS2"	"2.0906"	"365.6"	"100.000"	"46.1118"	"13746"	"13746"	"13729"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"445.1"	""	"459.8"	""	"441.0"	""	"611.5"	"0.3"	"742.1"	"772.1"	""	"927"	"54"	"36.000"	"29.000"	"0.000205612606462219"	""	"0"	"1.877E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"652.87189"	"1304.73650"	"1304.73715"	"-0.50"	"-0.00032"	"8/100"	"8"	"100"	"3701272.78436279"	"HCD"	"MS2"	"0"	"185.5"	"100.000"	"45.8196"	"13626"	"13626"	"13605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.2"	""	"243.5"	""	"230.8"	""	"301.4"	""	"377.3"	"369.4"	""	"921"	"52"	"36.000"	"29.000"	"0.00031932258367063"	""	"0"	"3.693E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"652.87207"	"1304.73686"	"1304.73715"	"-0.22"	"-0.00014"	"8/100"	"8"	"100"	"8681004.99487305"	"HCD"	"MS2"	"0.283227"	"380.9"	"100.000"	"45.8022"	"13654"	"13654"	"13637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"484.9"	""	"454.3"	""	"465.5"	""	"643.2"	"4.4"	"799.9"	"765.1"	""	"921"	"52"	"36.000"	"29.000"	"0.000314216968652239"	""	"0"	"4.495E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSSGVSEIR"	"[R].qLSSGVSEIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5849"	"0.0000"	"1"	"1"	"1"	"652.87213"	"1304.73699"	"1304.73715"	"-0.12"	"-0.00008"	"8/100"	"8"	"100"	"2051403.07653809"	"HCD"	"MS2"	"32.76936"	"114.5"	"100.000"	"45.4847"	"13524"	"13524"	"13496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.9"	""	"150.7"	""	"139.3"	""	"192.2"	"0.1"	"231.4"	"225.8"	""	"921"	"53"	"36.000"	"29.000"	"0.000230265903356899"	""	"0"	"7.524E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"652.87244"	"1304.73760"	"1304.73715"	"0.35"	"0.00023"	"8/90"	"8"	"90"	"2330427.66986084"	"HCD"	"MS2"	"12.57132"	"111.1"	"100.000"	"30.2665"	"7370"	"7370"	"7345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.4"	""	"134.5"	""	"152.8"	""	"201.1"	"2.0"	"204.7"	"191.0"	""	"931"	"40"	"36.000"	"29.000"	"0.00437441201067839"	"23"	"0"	"0.0002644"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGTTPAAIR"	"[K].tTSGTTPAAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"652.87292"	"1304.73857"	"1304.73715"	"1.09"	"0.00071"	"8/90"	"8"	"90"	"447304.589355469"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"30.5349"	"7476"	"7476"	"7469"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.4"	""	"35.5"	""	"34.7"	""	"59.3"	""	"56.0"	"48.4"	""	"897"	"44"	"36.000"	"29.000"	"0.00167788598840016"	"20"	"0"	"0.0003091"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGETTPDK"	"[K].vGETTPDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"652.87628"	"1304.74529"	"1304.74620"	"-0.70"	"-0.00046"	"5/64"	"5"	"64"	"629903.132019043"	"HCD"	"MS2"	"100"	"59.1"	"100.000"	"36.3901"	"9834"	"9834"	"9814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.9"	""	"68.0"	""	"61.5"	""	"107.5"	""	"125.4"	"132.2"	""	"914"	"17"	"36.000"	"29.000"	"0.999807062144946"	"20"	"0.001348"	"0.01073"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGETTPDK"	"[K].vGETTPDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"P19234"	"NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufv2 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"652.87653"	"1304.74578"	"1304.74620"	"-0.33"	"-0.00021"	"6/64"	"6"	"64"	"660388.80090332"	"HCD"	"MS2"	"44.02287"	"52.8"	"100.000"	"36.4631"	"9827"	"9827"	"9807"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.2"	""	"65.6"	""	"52.5"	""	"94.9"	""	"101.3"	"121.1"	""	"890"	"21"	"36.000"	"29.000"	"0.374420838032112"	"23"	"0.004213"	"0.04657"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDQDEK"	"[K].lVDQDEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"Q9WUW3"	"Complement factor I OS=Rattus norvegicus OX=10116 GN=Cfi PE=2 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"652.87909"	"1304.75090"	"1304.74620"	"3.60"	"0.00235"	"6/60"	"6"	"60"	"1184917.78582764"	"HCD"	"MS2"	"16.99043"	"98.3"	"100.000"	"43.6399"	"12774"	"12774"	"12746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.4"	""	"112.6"	""	"98.2"	""	"190.4"	"2.6"	"177.8"	"174.6"	""	"890"	"25"	"36.000"	"29.000"	"0.132543981109599"	"21"	"0.00307"	"0.03358"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIFQAR"	"[R].lQAEIFQAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"3"	"652.87927"	"1304.75127"	"1304.75240"	"-0.87"	"-0.00057"	"5/78"	"5"	"78"	"244708.863952637"	"HCD"	"MS2"	"41.0222"	"17.3"	"100.000"	"86.4598"	"30133"	"30133"	"30117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.1"	""	"31.6"	""	"21.2"	""	"26.4"	""	"34.0"	"33.5"	""	"885"	"11"	"36.000"	"29.000"	"3.45870303530336"	"18"	"0.002189"	"0.02083"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGEVQLVR"	"[R].gAFGEVQLVR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"652.87970"	"1304.75212"	"1304.75240"	"-0.21"	"-0.00014"	"8/78"	"8"	"78"	"1053989.48504639"	"HCD"	"MS2"	"11.2455"	"58.7"	"100.000"	"84.3156"	"29268"	"29268"	"29251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.0"	""	"80.9"	""	"94.1"	""	"88.5"	""	"110.9"	"112.2"	""	"850"	"53"	"36.000"	"29.000"	"0.000192481471459039"	"27"	"0"	"9.073E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGEVQLVR"	"[R].gAFGEVQLVR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"652.87988"	"1304.75249"	"1304.75240"	"0.07"	"0.00004"	"8/78"	"8"	"78"	"1200072.95684814"	"HCD"	"MS2"	"2.089625"	"66.6"	"100.000"	"84.2517"	"29213"	"29213"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.2"	""	"92.6"	""	"96.1"	""	"101.8"	""	"120.7"	"135.8"	""	"851"	"53"	"36.000"	"29.000"	"0.000224853454630339"	"22"	"0"	"4.209E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGEVQLVR"	"[R].gAFGEVQLVR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"652.87994"	"1304.75261"	"1304.75240"	"0.16"	"0.00010"	"7/78"	"7"	"78"	"548361.100036621"	"HCD"	"MS2"	"19.40955"	"34.8"	"100.000"	"83.9607"	"29095"	"29095"	"29076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.6"	""	"52.5"	""	"47.4"	""	"52.2"	""	"66.6"	"71.1"	""	"851"	"41"	"36.000"	"29.000"	"0.0031907998607096"	"29"	"0"	"0.0001224"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFGEVQLVR"	"[R].gAFGEVQLVR.[H]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"652.88007"	"1304.75286"	"1304.75240"	"0.35"	"0.00023"	"8/78"	"8"	"78"	"687231.515319824"	"HCD"	"MS2"	"16.83021"	"42.9"	"100.000"	"84.0109"	"29144"	"29144"	"29130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"67.5"	""	"64.4"	""	"63.5"	""	"84.5"	"71.8"	""	"854"	"50"	"36.000"	"29.000"	"0.000430950982354744"	"28"	"0"	"6.277E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTEGLQK"	"[K].gNTEGLQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"652.88184"	"1304.75640"	"1304.75744"	"-0.80"	"-0.00052"	"7/70"	"7"	"70"	"3018168.77270508"	"HCD"	"MS2"	"6.080209"	"238.0"	"100.000"	"34.6880"	"9111"	"9111"	"9092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"391.0"	""	"237.1"	""	"275.2"	""	"465.6"	""	"389.5"	"496.5"	""	"855"	"31"	"36.000"	"29.000"	"0.034114272880706"	"26"	"0.0001991"	"0.004057"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNTEGLQK"	"[K].gNTEGLQk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"652.88214"	"1304.75701"	"1304.75744"	"-0.33"	"-0.00022"	"7/70"	"7"	"70"	"3998841.01202393"	"HCD"	"MS2"	"0"	"311.0"	"100.000"	"34.6054"	"9114"	"9114"	"9091"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"468.9"	""	"302.2"	""	"357.5"	""	"623.6"	""	"545.1"	"654.1"	""	"918"	"31"	"36.000"	"29.000"	"0.0373949266365565"	"26"	"0.0001991"	"0.003285"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEETVAK"	"[K].gLEETVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"652.89270"	"1304.77812"	"1304.78259"	"-3.42"	"-0.00223"	"14/60"	"14"	"60"	"2786103.17333984"	"HCD"	"MS2"	"11.37099"	"221.0"	"100.000"	"52.0950"	"16168"	"16168"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"299.7"	""	"296.1"	""	"312.3"	""	"359.3"	""	"412.5"	"417.8"	""	"847"	"51"	"36.000"	"29.000"	"0.00030892525559281"	""	"9.9E-05"	"0.0006067"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEETVAK"	"[K].gLEETVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"652.89276"	"1304.77825"	"1304.78259"	"-3.33"	"-0.00217"	"12/60"	"12"	"60"	"2704633.29815674"	"HCD"	"MS2"	"19.53275"	"223.6"	"100.000"	"51.7655"	"16068"	"16068"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.7"	""	"283.8"	""	"312.5"	""	"360.1"	""	"424.2"	"438.4"	""	"847"	"42"	"36.000"	"29.000"	"0.0025873394754751"	"25"	"0.0001991"	"0.002618"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VQELETK"	"[R].vQELETk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"652.89417"	"1304.78105"	"1304.78259"	"-1.18"	"-0.00077"	"6/64"	"6"	"64"	"1278582.16271973"	"HCD"	"MS2"	"24.83987"	"107.2"	"100.000"	"54.2106"	"17032"	"17032"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.1"	""	"135.8"	""	"130.1"	""	"202.0"	"1.6"	"188.6"	"227.2"	""	"862"	"12"	"36.000"	"29.000"	"2.94765919978296"	"21"	"0.004819"	"0.05726"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VQELQTK"	"[].vQELqTk.[]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"652.89417"	"1304.78105"	"1304.78259"	"-1.18"	"-0.00077"	"6/64"	"6"	"64"	"1278582.16271973"	"HCD"	"MS2"	"24.83987"	"107.2"	"100.000"	"54.2106"	"17032"	"17032"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.1"	""	"135.8"	""	"130.1"	""	"202.0"	"1.6"	"188.6"	"227.2"	""	"862"	"12"	"36.000"	"29.000"	"2.94765919978296"	"21"	"0.004819"	"0.05726"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVAVDTVK"	"[R].dVAVDTVk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"652.89429"	"1304.78130"	"1304.78259"	"-0.99"	"-0.00065"	"7/66"	"7"	"66"	"851364.99206543"	"HCD"	"MS2"	"25.45009"	"73.9"	"100.000"	"53.6836"	"16817"	"16817"	"16793"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.3"	""	"93.4"	""	"92.9"	""	"120.7"	""	"148.0"	"143.0"	""	"862"	"46"	"36.000"	"29.000"	"0.00102441816353532"	"26"	"0"	"0.0002898"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETADVIAK"	"[R].eTADVIAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"652.89429"	"1304.78130"	"1304.78259"	"-0.99"	"-0.00065"	"14/62"	"14"	"62"	"1549753.92010498"	"HCD"	"MS2"	"10.17537"	"115.5"	"100.000"	"51.0565"	"15784"	"15784"	"15766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.8"	""	"143.6"	""	"158.8"	""	"174.3"	""	"228.2"	"238.3"	""	"862"	"52"	"36.000"	"29.000"	"0.000254963064329629"	""	"9.9E-05"	"0.0008375"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVELSDVK"	"[K].gVELSDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"435.59872"	"1304.78162"	"1304.78259"	"-0.74"	"-0.00032"	"6/62"	"6"	"62"	"847925.554504395"	"HCD"	"MS2"	"22.39403"	"41.7"	"100.000"	"65.6360"	"21669"	"21669"	"21643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.8"	""	"53.8"	""	"38.9"	""	"69.9"	"1.6"	"87.9"	"85.1"	""	"862"	"37"	"36.000"	"29.000"	"0.00947277605170259"	"23"	"0.0005778"	"0.007067"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VQELETK"	"[R].vQELETk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.89447"	"1304.78166"	"1304.78259"	"-0.71"	"-0.00046"	"6/64"	"6"	"64"	"1557583.31390381"	"HCD"	"MS2"	"18.87999"	"132.7"	"100.000"	"53.9208"	"16947"	"16947"	"16926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.4"	""	"167.5"	""	"165.3"	""	"219.9"	"0.5"	"248.0"	"275.1"	""	"862"	"22"	"36.000"	"29.000"	"0.279561440859291"	"24"	"0.002628"	"0.02739"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VQELQTK"	"[].vQELqTk.[]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.89447"	"1304.78166"	"1304.78259"	"-0.71"	"-0.00046"	"6/64"	"6"	"64"	"1557583.31390381"	"HCD"	"MS2"	"18.87999"	"132.7"	"100.000"	"53.9208"	"16947"	"16947"	"16926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.4"	""	"167.5"	""	"165.3"	""	"219.9"	"0.5"	"248.0"	"275.1"	""	"862"	"22"	"36.000"	"29.000"	"0.279561440859291"	"24"	"0.002628"	"0.02739"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVELSDVK"	"[K].gVELSDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"652.89453"	"1304.78179"	"1304.78259"	"-0.61"	"-0.00040"	"14/62"	"14"	"62"	"2864881.72467041"	"HCD"	"MS2"	"2.025546"	"235.2"	"100.000"	"65.8479"	"21755"	"21755"	"21739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.6"	""	"277.6"	""	"243.2"	""	"420.6"	""	"474.7"	"551.0"	""	"862"	"50"	"36.000"	"29.000"	"0.00044002491747801"	"29"	"9.9E-05"	"0.0009707"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEQSIK"	"[R].eLEQSIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"652.89459"	"1304.78191"	"1304.78259"	"-0.52"	"-0.00034"	"12/62"	"12"	"62"	"1439371.54473877"	"HCD"	"MS2"	"2.214472"	"118.8"	"100.000"	"52.3742"	"16316"	"16316"	"16294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.7"	""	"131.1"	""	"149.1"	""	"206.8"	"2.5"	"253.3"	"222.8"	""	"805"	"33"	"36.000"	"29.000"	"0.0208817015668907"	""	"0.001162"	"0.009209"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVELSDVK"	"[K].gVELSDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"435.59888"	"1304.78208"	"1304.78259"	"-0.39"	"-0.00017"	"6/62"	"6"	"62"	"838755.307556152"	"HCD"	"MS2"	"32.03725"	"37.2"	"100.000"	"65.6142"	"21694"	"21694"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.4"	""	"39.3"	""	"40.1"	""	"72.4"	"0.4"	"70.8"	"78.6"	""	"805"	"37"	"36.000"	"29.000"	"0.00810524010569611"	"24"	"0.0001991"	"0.003696"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEQSIK"	"[R].eLEQSIk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"652.89471"	"1304.78215"	"1304.78259"	"-0.33"	"-0.00022"	"12/62"	"12"	"62"	"1212762.34204102"	"HCD"	"MS2"	"0"	"107.1"	"100.000"	"52.7239"	"16425"	"16425"	"16401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.0"	""	"126.8"	""	"124.7"	""	"191.6"	"0.1"	"219.1"	"197.3"	""	"805"	"36"	"36.000"	"29.000"	"0.00972222985864088"	""	"0.0009352"	"0.008401"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETADVIAK"	"[R].eTADVIAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"Q5U1Z2"	"Trafficking protein particle complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Trappc3 PE=2 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"652.89471"	"1304.78215"	"1304.78259"	"-0.33"	"-0.00022"	"7/62"	"7"	"62"	"1568318.59088135"	"HCD"	"MS2"	"0"	"136.7"	"100.000"	"51.3661"	"15873"	"15873"	"15853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.5"	""	"160.7"	""	"155.4"	""	"254.5"	"0.9"	"280.1"	"273.5"	""	"805"	"49"	"36.000"	"29.000"	"0.000550510852302329"	"27"	"9.9E-05"	"0.0007399"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GLEETVAK"	"[K].gLEETVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.89484"	"1304.78240"	"1304.78259"	"-0.15"	"-0.00010"	"6/60"	"6"	"60"	"1884051.45812988"	"HCD"	"MS2"	"9.137758"	"162.8"	"100.000"	"52.4014"	"16293"	"16293"	"16275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.3"	""	"206.5"	""	"208.1"	""	"259.4"	""	"306.3"	"335.9"	""	"805"	"27"	"36.000"	"29.000"	"0.0724045543339338"	""	"0.0001991"	"0.002433"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GLEETVAK"	"[K].gLEETVAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.89490"	"1304.78252"	"1304.78259"	"-0.05"	"-0.00003"	"5/60"	"5"	"60"	"1924300.40643311"	"HCD"	"MS2"	"10.57877"	"159.7"	"100.000"	"52.0680"	"16191"	"16191"	"16171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.8"	""	"206.0"	""	"204.7"	""	"253.8"	"1.5"	"299.5"	"312.4"	""	"798"	"30"	"36.000"	"29.000"	"0.0379291312668857"	""	"0.0001991"	"0.003506"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VQELETK"	"[R].vQELETk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.89502"	"1304.78276"	"1304.78259"	"0.13"	"0.00009"	"6/64"	"6"	"64"	"1598762.88824463"	"HCD"	"MS2"	"14.4431"	"138.1"	"100.000"	"54.2175"	"17068"	"17068"	"17047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.0"	""	"143.4"	""	"173.6"	""	"239.6"	""	"287.2"	"302.0"	""	"798"	"21"	"36.000"	"29.000"	"0.285741220674948"	"19"	"0.003904"	"0.04246"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VQELQTK"	"[].vQELqTk.[]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.89502"	"1304.78276"	"1304.78259"	"0.13"	"0.00009"	"6/64"	"6"	"64"	"1598762.88824463"	"HCD"	"MS2"	"14.4431"	"138.1"	"100.000"	"54.2175"	"17068"	"17068"	"17047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.0"	""	"143.4"	""	"173.6"	""	"239.6"	""	"287.2"	"302.0"	""	"798"	"21"	"36.000"	"29.000"	"0.285741220674948"	"19"	"0.003904"	"0.04246"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVELSDVK"	"[K].gVELSDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"652.89508"	"1304.78288"	"1304.78259"	"0.23"	"0.00015"	"7/62"	"7"	"62"	"3234605.20013428"	"HCD"	"MS2"	"4.743531"	"252.5"	"100.000"	"65.5889"	"21683"	"21683"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.8"	""	"325.1"	""	"242.2"	""	"500.9"	""	"476.1"	"522.8"	""	"798"	"49"	"36.000"	"29.000"	"0.000452869315453254"	"29"	"9.9E-05"	"0.0004287"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VQELETK"	"[R].vQELETk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"652.89514"	"1304.78301"	"1304.78259"	"0.32"	"0.00021"	"10/64"	"10"	"64"	"1662223.8807373"	"HCD"	"MS2"	"8.784785"	"138.3"	"100.000"	"54.5233"	"17159"	"17159"	"17142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.1"	""	"156.5"	""	"157.1"	""	"238.3"	""	"304.6"	"285.6"	""	"814"	"28"	"36.000"	"29.000"	"0.0617439499555949"	"20"	"0.002508"	"0.0234"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"VQELQTK"	"[].vQELqTk.[]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"652.89514"	"1304.78301"	"1304.78259"	"0.32"	"0.00021"	"10/64"	"10"	"64"	"1662223.8807373"	"HCD"	"MS2"	"8.784785"	"138.3"	"100.000"	"54.5233"	"17159"	"17159"	"17142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.1"	""	"156.5"	""	"157.1"	""	"238.3"	""	"304.6"	"285.6"	""	"814"	"28"	"36.000"	"29.000"	"0.0617439499555949"	"20"	"0.002508"	"0.02341"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVELSDVK"	"[K].gVELSDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"652.89514"	"1304.78301"	"1304.78259"	"0.32"	"0.00021"	"14/62"	"14"	"62"	"2954140.98187256"	"HCD"	"MS2"	"0"	"245.7"	"100.000"	"65.8768"	"21800"	"21800"	"21784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"293.8"	""	"279.8"	""	"248.7"	""	"447.1"	""	"513.5"	"558.4"	""	"814"	"50"	"36.000"	"29.000"	"0.000428148482646051"	"29"	"0"	"0.000394"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVELSDVK"	"[K].gVELSDVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"652.89520"	"1304.78313"	"1304.78259"	"0.41"	"0.00027"	"7/62"	"7"	"62"	"3335427.33734131"	"HCD"	"MS2"	"1.684248"	"262.3"	"100.000"	"65.5533"	"21635"	"21635"	"21615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"340.1"	""	"320.2"	""	"267.3"	""	"506.3"	"0.9"	"502.3"	"552.6"	""	"814"	"47"	"36.000"	"29.000"	"0.000728776582592364"	"28"	"0.0001686"	"0.001129"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNELLK"	"[K].eTNELLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"652.89551"	"1304.78374"	"1304.78259"	"0.88"	"0.00058"	"6/62"	"6"	"62"	"1366808.66693115"	"HCD"	"MS2"	"39.369"	"110.7"	"100.000"	"55.4036"	"17518"	"17518"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.4"	""	"112.7"	""	"117.3"	""	"228.1"	""	"228.3"	"230.0"	""	"743"	"29"	"35.000"	"28.000"	"0.0511633317694101"	""	"0.001872"	"0.01579"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNELLK"	"[K].eTNELLk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"G3V7P1"	"Syntaxin-12 OS=Rattus norvegicus OX=10116 GN=Stx12 PE=1 SV=1"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"652.89563"	"1304.78398"	"1304.78259"	"1.07"	"0.00070"	"10/62"	"10"	"62"	"1568534.35882568"	"HCD"	"MS2"	"39.28119"	"129.8"	"100.000"	"55.0862"	"17423"	"17423"	"17394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.3"	""	"126.8"	""	"137.6"	""	"258.7"	"0.3"	"284.9"	"255.6"	""	"751"	"24"	"35.000"	"28.000"	"0.140155434252293"	""	"0.002166"	"0.01995"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"653.33685"	"1305.66643"	"1305.66702"	"-0.45"	"-0.00029"	"9/88"	"9"	"88"	"279338.361938477"	"HCD"	"MS2"	"33.04222"	"20.7"	"100.000"	"82.0700"	"28334"	"28334"	"28311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"28.1"	""	"25.0"	""	"29.5"	"1.4"	"44.9"	"40.9"	""	"670"	"13"	"35.000"	"28.000"	"1.62197743140673"	"20"	"0.001348"	"0.01052"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"653.33685"	"1305.66643"	"1305.66702"	"-0.45"	"-0.00029"	"7/88"	"7"	"88"	"784425.218811035"	"HCD"	"MS2"	"21.41449"	"48.9"	"100.000"	"81.3990"	"28062"	"28062"	"28042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.4"	""	"55.8"	""	"64.0"	""	"60.2"	"0.6"	"109.3"	"112.7"	""	"670"	"48"	"35.000"	"28.000"	"0.000548333534678316"	""	"0"	"0.0003142"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"653.33685"	"1305.66643"	"1305.66702"	"-0.45"	"-0.00029"	"7/88"	"7"	"88"	"851392.866027832"	"HCD"	"MS2"	"27.87682"	"50.4"	"100.000"	"81.4768"	"28121"	"28121"	"28093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.2"	""	"66.4"	""	"65.2"	""	"54.0"	"1.0"	"112.0"	"113.6"	""	"670"	"46"	"35.000"	"28.000"	"0.000899590389295599"	""	"0"	"3.58E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5208"	"0.0000"	"1"	"1"	"1"	"653.33704"	"1305.66680"	"1305.66702"	"-0.17"	"-0.00011"	"7/88"	"7"	"88"	"1460192.11706543"	"HCD"	"MS2"	"10.58966"	"83.1"	"100.000"	"81.7217"	"28192"	"28192"	"28171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.9"	""	"104.7"	""	"106.1"	""	"81.2"	""	"190.1"	"191.5"	""	"667"	"48"	"35.000"	"28.000"	"0.000534682337795129"	""	"0"	"6.412E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNLAEDIMR"	"[R].dNLAEDIMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.5918"	"0.0000"	"1"	"1"	"1"	"653.33704"	"1305.66680"	"1305.66702"	"-0.17"	"-0.00011"	"7/88"	"7"	"88"	"1409077.89349365"	"HCD"	"MS2"	"16.56203"	"76.7"	"100.000"	"81.7859"	"28246"	"28246"	"28232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"112.6"	""	"88.8"	""	"82.0"	""	"157.8"	"187.4"	""	"667"	"49"	"35.000"	"28.000"	"0.000377655521139058"	""	"0"	"8.881E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNNLDSNR"	"[K].lMNNLDSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"653.34094"	"1305.67461"	"1305.67825"	"-2.79"	"-0.00182"	"7/78"	"7"	"78"	"1605866.60791016"	"HCD"	"MS2"	"38.70959"	"103.2"	"100.000"	"49.5741"	"15146"	"15146"	"15117"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.5"	""	"117.9"	""	"119.6"	""	"129.7"	""	"221.9"	"239.0"	""	"682"	"44"	"35.000"	"28.000"	"0.00133583980093754"	"24"	"0"	"0.0003563"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNNLDSNR"	"[K].lMNNLDSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"653.34161"	"1305.67595"	"1305.67825"	"-1.76"	"-0.00115"	"7/78"	"7"	"78"	"1321125.78771973"	"HCD"	"MS2"	"9.978028"	"117.7"	"100.000"	"49.9075"	"15281"	"15281"	"15262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.8"	""	"171.3"	""	"150.6"	""	"163.0"	""	"236.2"	"233.0"	""	"686"	"28"	"35.000"	"28.000"	"0.0506167340913631"	"21"	"0.0001686"	"0.001279"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNNLDSNR"	"[K].lMNNLDSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"653.34161"	"1305.67595"	"1305.67825"	"-1.76"	"-0.00115"	"7/78"	"7"	"78"	"1835712.54333496"	"HCD"	"MS2"	"14.43868"	"120.5"	"100.000"	"49.5972"	"15155"	"15155"	"15132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.6"	""	"130.2"	""	"154.8"	""	"148.8"	""	"244.7"	"296.5"	""	"686"	"42"	"35.000"	"28.000"	"0.00228714721840272"	"24"	"9.9E-05"	"0.0004153"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNNLDSNR"	"[K].lMNNLDSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"653.34204"	"1305.67681"	"1305.67825"	"-1.11"	"-0.00072"	"7/78"	"7"	"78"	"1666939.75439453"	"HCD"	"MS2"	"10.94981"	"109.4"	"100.000"	"49.2692"	"15056"	"15056"	"15035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.9"	""	"120.0"	""	"126.9"	""	"148.8"	"1.3"	"241.3"	"242.3"	""	"690"	"48"	"35.000"	"28.000"	"0.00049296841568633"	""	"0"	"0.000356"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMNNLDSNR"	"[K].lMNNLDSNR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"653.34229"	"1305.67729"	"1305.67825"	"-0.73"	"-0.00048"	"7/78"	"7"	"78"	"1569029.54650879"	"HCD"	"MS2"	"17.74243"	"130.9"	"100.000"	"49.5612"	"15175"	"15175"	"15157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.6"	""	"190.9"	""	"184.0"	""	"169.6"	""	"266.3"	"264.4"	""	"725"	"36"	"35.000"	"28.000"	"0.00931768471253713"	""	"9.9E-05"	"0.0005318"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"435.89993"	"1305.68525"	"1305.68731"	"-1.58"	"-0.00069"	"9/52"	"9"	"52"	"7420157.84362793"	"HCD"	"MS2"	"18.8418"	"366.7"	"100.000"	"20.9803"	"3667"	"3667"	"3651"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.3"	""	"391.1"	""	"461.4"	""	"925.8"	"4.9"	"692.0"	"622.5"	""	"785"	"31"	"35.000"	"28.000"	"0.0335613684807238"	"20"	"0.001348"	"0.01052"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"435.90002"	"1305.68552"	"1305.68731"	"-1.37"	"-0.00060"	"8/52"	"8"	"52"	"8308209.31463623"	"HCD"	"MS2"	"23.94086"	"396.7"	"100.000"	"20.9868"	"3707"	"3707"	"3697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"418.0"	""	"450.8"	""	"498.1"	""	"966.8"	""	"759.6"	"670.2"	""	"785"	"27"	"35.000"	"28.000"	"0.070605683418805"	"21"	"0.00192"	"0.01598"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"653.34680"	"1305.68633"	"1305.68731"	"-0.75"	"-0.00049"	"5/52"	"5"	"52"	"706470.181945801"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"20.9109"	"3677"	"3677"	"3658"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.4"	""	"59.5"	""	"76.0"	""	"123.6"	""	"79.8"	"76.3"	""	"763"	"25"	"35.000"	"28.000"	"0.112588631997323"	"21"	"0.004852"	"0.06004"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSDDMK"	"[K].hVSDDmk.[T]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"653.34747"	"1305.68767"	"1305.68731"	"0.28"	"0.00018"	"5/52"	"5"	"52"	"534961.705749512"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"20.9322"	"3648"	"3648"	"3630"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"49.9"	""	"51.1"	""	"93.8"	""	"66.6"	"57.9"	""	"764"	"22"	"35.000"	"28.000"	"0.254134345669065"	"15"	"0.005266"	"0.0665"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"653.36371"	"1305.72014"	"1305.72116"	"-0.78"	"-0.00051"	"8/84"	"8"	"84"	"1075711.22631836"	"HCD"	"MS2"	"0"	"63.1"	"100.000"	"57.7740"	"18474"	"18474"	"18455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"78.7"	""	"89.0"	""	"102.9"	""	"133.9"	"136.2"	""	"878"	"65"	"36.000"	"29.000"	"1.50475058293891E-05"	"24"	"0"	"8.525E-07"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"653.36389"	"1305.72051"	"1305.72116"	"-0.50"	"-0.00033"	"8/84"	"8"	"84"	"713616.76940918"	"HCD"	"MS2"	"14.22104"	"48.9"	"100.000"	"58.0752"	"18597"	"18597"	"18578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"45.7"	""	"72.6"	""	"79.0"	"0.1"	"106.6"	"104.2"	""	"878"	"61"	"36.000"	"29.000"	"3.57655180685148E-05"	"20"	"0"	"2.561E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"653.36401"	"1305.72075"	"1305.72116"	"-0.31"	"-0.00021"	"7/84"	"7"	"84"	"1056978.81610107"	"HCD"	"MS2"	"11.4975"	"59.5"	"100.000"	"57.4882"	"18393"	"18393"	"18372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.1"	""	"74.3"	""	"82.5"	""	"100.5"	"0.2"	"115.6"	"123.4"	""	"878"	"62"	"36.000"	"29.000"	"2.73819592776782E-05"	"21"	"0"	"3.732E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VASSTLLDDR"	"[R].vASSTLLDDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"653.36438"	"1305.72148"	"1305.72116"	"0.25"	"0.00016"	"8/84"	"8"	"84"	"706295.781738281"	"HCD"	"MS2"	"5.199054"	"45.0"	"100.000"	"57.7946"	"18518"	"18518"	"18498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"52.4"	""	"58.4"	""	"70.9"	"1.3"	"100.2"	"89.8"	""	"874"	"61"	"36.000"	"29.000"	"3.66000296289447E-05"	"21"	"0"	"6.046E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLQDEK"	"[R].nTLQDEk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"653.37421"	"1305.74114"	"1305.74145"	"-0.24"	"-0.00016"	"12/68"	"12"	"68"	"461657.989379883"	"HCD"	"MS2"	"0"	"44.5"	"100.000"	"34.3734"	"8984"	"8984"	"8959"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"29.0"	""	"29.2"	""	"105.9"	""	"137.0"	"89.8"	""	"871"	"38"	"36.000"	"29.000"	"0.00654618326232205"	"28"	"0.0001991"	"0.005365"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEIEEK"	"[K].sLEIEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"4"	"P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P36876; P97888; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"653.38647"	"1305.76567"	"1305.76660"	"-0.71"	"-0.00047"	"12/58"	"12"	"58"	"1472113.92871094"	"HCD"	"MS2"	"0"	"121.2"	"100.000"	"60.7085"	"19702"	"19702"	"19687"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.7"	""	"145.3"	""	"150.4"	""	"205.8"	"1.5"	"225.7"	"221.6"	""	"858"	"34"	"36.000"	"29.000"	"0.0166900367202546"	""	"0.001872"	"0.01546"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEIEEK"	"[K].sLEIEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"4"	"P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"P36876; P97888; P36877; P56932"	"Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2a PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2c PE=2 SV=1; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2b PE=1 SV=2; Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r2d PE=2 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"653.38684"	"1305.76641"	"1305.76660"	"-0.15"	"-0.00010"	"12/58"	"12"	"58"	"1671826.65924072"	"HCD"	"MS2"	"3.87855"	"135.7"	"100.000"	"60.8146"	"19713"	"19713"	"19695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.4"	""	"176.9"	""	"172.2"	""	"214.6"	""	"257.3"	"253.1"	""	"793"	"34"	"35.000"	"28.000"	"0.0146636873282876"	""	"0.001718"	"0.01504"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"653.39197"	"1305.77666"	"1305.77784"	"-0.90"	"-0.00059"	"14/70"	"14"	"70"	"3954445.37512207"	"HCD"	"MS2"	"0"	"279.2"	"100.000"	"35.9864"	"9635"	"9635"	"9616"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"417.0"	""	"384.0"	""	"386.0"	""	"455.6"	"2.5"	"508.4"	"490.2"	""	"769"	"48"	"35.000"	"28.000"	"0.00061644785272032"	""	"9.9E-05"	"0.0006632"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGSLETK"	"[K].vNGSLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"653.39276"	"1305.77825"	"1305.77784"	"0.31"	"0.00020"	"6/74"	"6"	"74"	"849866.520874023"	"HCD"	"MS2"	"0"	"82.4"	"100.000"	"43.3894"	"12637"	"12637"	"12608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.7"	""	"113.2"	""	"110.8"	""	"131.4"	""	"150.8"	"161.5"	""	"740"	"32"	"35.000"	"28.000"	"0.0238892064742823"	""	"0.0001686"	"0.001047"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.5400"	"0.0000"	"1"	"1"	"1"	"653.39276"	"1305.77825"	"1305.77784"	"0.31"	"0.00020"	"14/70"	"14"	"70"	"4471780.08807373"	"HCD"	"MS2"	"0"	"328.7"	"100.000"	"35.8835"	"9631"	"9631"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"488.9"	""	"451.9"	""	"440.3"	""	"545.1"	""	"609.3"	"582.8"	""	"740"	"50"	"35.000"	"28.000"	"0.000360746165955433"	""	"0.0001686"	"0.001907"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGSLETK"	"[K].vNGSLETk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.2973"	"0.0000"	"1"	"1"	"1"	"653.39282"	"1305.77837"	"1305.77784"	"0.41"	"0.00027"	"6/74"	"6"	"74"	"845734.996887207"	"HCD"	"MS2"	"0"	"78.3"	"100.000"	"43.2148"	"12600"	"12600"	"12571"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.2"	""	"106.8"	""	"102.4"	""	"121.6"	""	"149.1"	"155.9"	""	"740"	"37"	"35.000"	"28.000"	"0.00745077972449083"	""	"0.0001686"	"0.001152"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"653.39288"	"1305.77849"	"1305.77784"	"0.50"	"0.00033"	"14/70"	"14"	"70"	"540259.51940918"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"36.2866"	"9757"	"9757"	"9735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.8"	""	"57.6"	""	"69.1"	""	"75.2"	""	"100.1"	"97.5"	""	"740"	"49"	"35.000"	"28.000"	"0.00043873443682185"	""	"0"	"0.0002412"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDNTTAK"	"[K].vVDNTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.4889"	"0.0000"	"1"	"1"	"1"	"653.39343"	"1305.77959"	"1305.77784"	"1.34"	"0.00088"	"7/70"	"7"	"70"	"524870.903686523"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"36.1793"	"9751"	"9751"	"9731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"68.6"	""	"55.9"	""	"84.1"	""	"91.2"	"106.5"	""	"688"	"45"	"35.000"	"28.000"	"0.00101755628849373"	""	"0.0001686"	"0.001856"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPASPVVHIR"	"[K].tPASPVVHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"435.93237"	"1305.78257"	"1305.78404"	"-1.13"	"-0.00049"	"8/78"	"8"	"78"	"16075032.4943848"	"HCD"	"MS2"	"22.84324"	"158.3"	"66.616"	"38.5442"	"10672"	"10672"	"10658"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.1"	""	"165.3"	""	"173.5"	""	"309.6"	"3.6"	"315.8"	"335.4"	""	"703"	"54"	"35.000"	"28.000"	"0.000139934670449554"	"16"	"0"	"7.628E-06"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPASPVVHIR"	"[K].tPASPVVHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"435.93268"	"1305.78348"	"1305.78404"	"-0.42"	"-0.00018"	"6/78"	"6"	"78"	"19671656.9458008"	"HCD"	"MS2"	"22.42843"	"173.9"	"57.694"	"38.5119"	"10695"	"10695"	"10676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.6"	""	"193.1"	""	"191.8"	""	"314.8"	"3.4"	"380.6"	"357.7"	""	"715"	"53"	"35.000"	"28.000"	"0.000167600784116932"	"16"	"0"	"2.457E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"436.23639"	"1306.69461"	"1306.69528"	"-0.51"	"-0.00022"	"6/76"	"6"	"76"	"2423281.37414551"	"HCD"	"MS2"	"17.11491"	"100.9"	"100.000"	"28.8254"	"6787"	"6787"	"6764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.3"	""	"119.9"	""	"131.3"	""	"166.5"	"6.5"	"217.2"	"192.8"	""	"784"	"15"	"35.000"	"28.000"	"1.18382107439759"	"17"	"0.004959"	"0.06182"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"436.23651"	"1306.69498"	"1306.69528"	"-0.23"	"-0.00010"	"6/76"	"6"	"76"	"5616939.14794922"	"HCD"	"MS2"	"32.30269"	"202.7"	"100.000"	"28.7503"	"6715"	"6715"	"6697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"315.9"	""	"247.4"	""	"254.7"	""	"331.4"	""	"389.3"	"385.5"	""	"753"	"21"	"35.000"	"28.000"	"0.335555978207355"	"18"	"0.002166"	"0.01987"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREEYPDR"	"[K].iREEYPDR.[I]"	"N-Term(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"436.23657"	"1306.69516"	"1306.69528"	"-0.09"	"-0.00004"	"6/76"	"6"	"76"	"5029481.02703857"	"HCD"	"MS2"	"21.39809"	"188.3"	"100.000"	"28.5085"	"6660"	"6660"	"6647"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"275.6"	""	"232.5"	""	"244.5"	""	"304.2"	""	"378.2"	"353.8"	""	"754"	"20"	"35.000"	"28.000"	"0.373543643224574"	"18"	"0.001615"	"0.01471"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPSLLDVR"	"[R].yDPSLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"653.86371"	"1306.72014"	"1306.72043"	"-0.22"	"-0.00015"	"7/74"	"7"	"74"	"706048.052429199"	"HCD"	"MS2"	"24.35314"	"36.9"	"100.000"	"93.2308"	"32822"	"32822"	"32799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.1"	""	"47.4"	"1.6"	"51.9"	""	"56.7"	""	"63.3"	"67.9"	""	"914"	"43"	"36.000"	"29.000"	"0.00248837712348987"	"23"	"9.9E-05"	"0.0005782"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPSLLDVR"	"[R].yDPSLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"653.86389"	"1306.72051"	"1306.72043"	"0.06"	"0.00004"	"6/74"	"6"	"74"	"366646.316589355"	"HCD"	"MS2"	"20.72571"	"19.9"	"100.000"	"93.4499"	"32946"	"32946"	"32926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"24.5"	""	"31.0"	""	"34.6"	""	"37.3"	"34.8"	""	"910"	"22"	"36.000"	"29.000"	"0.286425313200025"	"25"	"0.005712"	"0.07116"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPSLLDVR"	"[R].yDPSLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"653.86414"	"1306.72099"	"1306.72043"	"0.43"	"0.00028"	"6/74"	"6"	"74"	"671493.064697266"	"HCD"	"MS2"	"9.081027"	"33.5"	"100.000"	"93.1335"	"32819"	"32819"	"32800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.5"	""	"41.5"	""	"53.1"	""	"51.8"	""	"56.4"	"54.9"	""	"921"	"26"	"36.000"	"29.000"	"0.119737347883761"	"20"	"0.00403"	"0.0438"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPSLLDVR"	"[R].yDPSLLDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"Q5PPN4"	"Carbonic anhydrase-related protein OS=Rattus norvegicus OX=10116 GN=Ca8 PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"653.86420"	"1306.72112"	"1306.72043"	"0.52"	"0.00034"	"6/74"	"6"	"74"	"372128.602966309"	"HCD"	"MS2"	"26.21097"	"20.7"	"100.000"	"93.5266"	"32941"	"32941"	"32923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"31.4"	""	"31.5"	""	"34.1"	""	"37.5"	"34.6"	""	"921"	"23"	"36.000"	"29.000"	"0.214402396067323"	"16"	"0.004634"	"0.05454"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLANNSSK"	"[R].dLANNSSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"653.87140"	"1306.73552"	"1306.73670"	"-0.90"	"-0.00059"	"12/76"	"12"	"76"	"1745399.75231934"	"HCD"	"MS2"	"7.762055"	"154.2"	"100.000"	"30.8672"	"7605"	"7605"	"7583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.6"	""	"196.2"	""	"204.3"	""	"264.6"	""	"263.7"	"267.1"	""	"823"	"40"	"36.000"	"29.000"	"0.00398446337851504"	"29"	"0.0001686"	"0.001677"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLANNSSK"	"[R].dLANNSSk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"653.87195"	"1306.73662"	"1306.73670"	"-0.06"	"-0.00004"	"7/76"	"7"	"76"	"1424955.01867676"	"HCD"	"MS2"	"20.48225"	"126.9"	"100.000"	"30.9577"	"7603"	"7603"	"7590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.5"	""	"160.3"	""	"158.8"	""	"197.2"	"2.0"	"234.4"	"224.4"	""	"906"	"44"	"36.000"	"29.000"	"0.00201417964163506"	"26"	"9.9E-05"	"0.0004186"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHAVGDIPGVR"	"[K].gHAVGDIPGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"436.25101"	"1306.73847"	"1306.74290"	"-3.39"	"-0.00148"	"6/80"	"6"	"80"	"10132984.7809448"	"HCD"	"MS2"	"34.54306"	"240.5"	"100.000"	"36.9254"	"10051"	"10051"	"10026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"417.7"	""	"366.1"	""	"292.3"	""	"439.6"	""	"419.7"	"341.6"	""	"881"	"35"	"36.000"	"29.000"	"0.0154862374052715"	"15"	"0"	"5.693E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLGESEK"	"[K].wLGESEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"653.87347"	"1306.73967"	"1306.74072"	"-0.80"	"-0.00053"	"6/52"	"6"	"52"	"608512.070983887"	"HCD"	"MS2"	"9.317634"	"55.1"	"100.000"	"67.8987"	"22585"	"22585"	"22564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.7"	""	"65.1"	""	"81.0"	""	"90.2"	""	"110.4"	"99.0"	""	"867"	"21"	"36.000"	"29.000"	"0.353174307123034"	"23"	"0.001453"	"0.0117"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHAVGDIPGVR"	"[K].gHAVGDIPGVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"P62268"	"40S ribosomal protein S23 OS=Rattus norvegicus OX=10116 GN=Rps23 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"436.25156"	"1306.74012"	"1306.74290"	"-2.13"	"-0.00093"	"7/80"	"7"	"80"	"9370753.58966064"	"HCD"	"MS2"	"28.12447"	"218.9"	"100.000"	"37.0008"	"10044"	"10044"	"10020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.8"	""	"333.7"	""	"263.8"	""	"393.1"	"0.9"	"396.1"	"303.1"	""	"854"	"38"	"36.000"	"29.000"	"0.00640365424759514"	"15"	"0"	"9.844E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLGESEK"	"[K].wLGESEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"Q793F9"	"Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"653.87433"	"1306.74138"	"1306.74072"	"0.50"	"0.00033"	"6/52"	"6"	"52"	"741526.388244629"	"HCD"	"MS2"	"11.17959"	"66.0"	"100.000"	"67.9806"	"22650"	"22650"	"22626"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.1"	""	"89.6"	""	"85.7"	""	"116.9"	""	"121.1"	"116.1"	""	"857"	"22"	"36.000"	"29.000"	"0.280511600587827"	"26"	"0.001615"	"0.01486"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEWLDGK"	"[K].tEWLDGk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"653.87439"	"1306.74150"	"1306.74072"	"0.60"	"0.00039"	"6/56"	"6"	"56"	"582975.444030762"	"HCD"	"MS2"	"9.203384"	"52.3"	"100.000"	"81.3251"	"28059"	"28059"	"28039"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.1"	""	"65.8"	""	"69.0"	""	"74.8"	"0.5"	"110.1"	"102.0"	""	"853"	"31"	"36.000"	"29.000"	"0.0374903103428373"	"24"	"0.0007633"	"0.007413"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLESFQVK"	"[K].QVLESFQVk.[S]"	"K9(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"653.88153"	"1306.75578"	"1306.75682"	"-0.79"	"-0.00052"	"6/82"	"6"	"82"	"915196.452209473"	"HCD"	"MS2"	"15.08253"	"29.5"	"100.000"	"111.2291"	"40020"	"40020"	"39996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.5"	""	"47.0"	""	"39.0"	""	"44.7"	""	"58.7"	"64.5"	""	"879"	"38"	"36.000"	"29.000"	"0.00765524120855613"	"18"	"0.003529"	"0.03861"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDVIDTK"	"[K].tGDVIDTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"653.88324"	"1306.75920"	"1306.76185"	"-2.03"	"-0.00132"	"7/68"	"7"	"68"	"1164416.21734619"	"HCD"	"MS2"	"0"	"99.7"	"100.000"	"47.1998"	"14218"	"14218"	"14193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.3"	""	"115.4"	""	"127.2"	""	"203.6"	"2.2"	"189.2"	"185.9"	""	"849"	"19"	"36.000"	"29.000"	"0.541848274340415"	"21"	"0.001488"	"0.01283"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDVIDTK"	"[K].tGDVIDTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"Q810F4"	"Protein FAM3C OS=Rattus norvegicus OX=10116 GN=Fam3c PE=2 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"653.88330"	"1306.75932"	"1306.76185"	"-1.93"	"-0.00126"	"7/68"	"7"	"68"	"1378951.61529541"	"HCD"	"MS2"	"14.73466"	"115.4"	"100.000"	"47.5678"	"14330"	"14330"	"14303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.6"	""	"130.3"	""	"127.6"	""	"240.1"	"0.0"	"233.2"	"222.8"	""	"850"	"17"	"36.000"	"29.000"	"0.759257219312122"	"25"	"0.0007633"	"0.007405"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASAEEIK"	"[R].tASAEEIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"653.88391"	"1306.76055"	"1306.76185"	"-1.00"	"-0.00065"	"7/66"	"7"	"66"	"1952457.91217041"	"HCD"	"MS2"	"0"	"173.5"	"100.000"	"39.0288"	"10871"	"10871"	"10845"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"277.1"	""	"213.6"	""	"242.0"	""	"262.6"	""	"327.6"	"323.2"	""	"848"	"40"	"36.000"	"29.000"	"0.00419146512134542"	""	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASAEEIK"	"[R].tASAEEIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"653.88458"	"1306.76189"	"1306.76185"	"0.03"	"0.00002"	"12/66"	"12"	"66"	"954909.973510742"	"HCD"	"MS2"	"18.64159"	"95.6"	"100.000"	"39.0538"	"10917"	"10917"	"10890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.5"	""	"127.1"	""	"130.9"	""	"165.2"	""	"176.7"	"175.3"	""	"772"	"33"	"35.000"	"28.000"	"0.0184326299631869"	""	"0.000264"	"0.006102"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVMEAAAK"	"[K].iVmEAAAk.[H]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"653.89429"	"1306.78130"	"1306.78048"	"0.63"	"0.00041"	"7/56"	"7"	"56"	"759678.627746582"	"HCD"	"MS2"	"9.420225"	"65.9"	"100.000"	"47.5379"	"14355"	"14355"	"14335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.3"	""	"69.4"	""	"76.0"	""	"156.6"	"0.4"	"125.8"	"126.5"	""	"669"	"26"	"35.000"	"28.000"	"0.0846050179811235"	"20"	"0.004392"	"0.05137"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"654.34302"	"1307.67876"	"1307.67930"	"-0.41"	"-0.00027"	"6/70"	"6"	"70"	"2254903.02490234"	"HCD"	"MS2"	"0"	"108.3"	"100.000"	"41.2320"	"11796"	"11796"	"11766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.9"	""	"129.4"	""	"149.1"	""	"159.9"	"0.9"	"205.2"	"236.9"	""	"760"	"27"	"35.000"	"28.000"	"0.0677303931630274"	"25"	"0.0001686"	"0.001911"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"654.34302"	"1307.67876"	"1307.67930"	"-0.41"	"-0.00027"	"8/70"	"8"	"70"	"2436703.87994385"	"HCD"	"MS2"	"16.52334"	"116.6"	"100.000"	"41.3722"	"11815"	"11815"	"11786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.0"	""	"149.5"	""	"145.4"	""	"189.5"	"0.1"	"219.2"	"235.8"	""	"760"	"30"	"35.000"	"28.000"	"0.034816378624636"	"25"	"9.9E-05"	"0.0004898"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIETDPANR"	"[R].yIETDPANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"654.34302"	"1307.67876"	"1307.67930"	"-0.41"	"-0.00027"	"5/70"	"5"	"70"	"2098993.35198975"	"HCD"	"MS2"	"33.2826"	"98.7"	"100.000"	"41.5307"	"11913"	"11913"	"11894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.2"	""	"132.3"	""	"119.1"	""	"148.3"	""	"203.4"	"221.4"	""	"760"	"16"	"35.000"	"28.000"	"1.02750417836136"	"16"	"0.001615"	"0.01491"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVEEGTGLR"	"[R].sMVEEGTGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"654.34375"	"1307.68022"	"1307.68267"	"-1.87"	"-0.00122"	"8/84"	"8"	"84"	"783852.651977539"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"45.3524"	"13436"	"13436"	"13410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.3"	""	"90.3"	""	"81.9"	""	"62.6"	""	"92.1"	"105.5"	""	"752"	"55"	"35.000"	"28.000"	"0.000124218947429842"	""	"0"	"1.325E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVEEGTGLR"	"[R].sMVEEGTGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"654.34436"	"1307.68144"	"1307.68267"	"-0.94"	"-0.00061"	"8/84"	"8"	"84"	"853463.956298828"	"HCD"	"MS2"	"16.76879"	"56.7"	"100.000"	"45.1510"	"13388"	"13388"	"13360"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.6"	""	"88.9"	""	"88.1"	""	"63.8"	""	"101.8"	"113.7"	""	"757"	"54"	"35.000"	"28.000"	"0.000141927281349916"	"28"	"0"	"7.528E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENFQNWLK"	"[R].ENFQNWLk.[D]"	"K8(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"654.35046"	"1307.69365"	"1307.69455"	"-0.69"	"-0.00045"	"5/68"	"5"	"68"	"630345.447570801"	"HCD"	"MS2"	"0"	"29.4"	"100.000"	"92.5968"	"32571"	"32571"	"32552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"44.6"	""	"42.2"	""	"42.5"	""	"59.5"	"51.3"	""	"879"	"32"	"36.000"	"29.000"	"0.0293061575069387"	"22"	"0.008893"	"0.1141"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"654.36115"	"1307.71501"	"1307.71568"	"-0.51"	"-0.00033"	"7/82"	"7"	"82"	"1952077.56433105"	"HCD"	"MS2"	"3.737896"	"91.0"	"100.000"	"77.8152"	"26632"	"26632"	"26612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.7"	""	"117.8"	""	"119.0"	""	"152.2"	"3.5"	"174.7"	"180.6"	""	"890"	"46"	"36.000"	"29.000"	"0.00112813224057157"	""	"0"	"1.018E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"654.36133"	"1307.71538"	"1307.71568"	"-0.23"	"-0.00015"	"8/82"	"8"	"82"	"1716465.49914551"	"HCD"	"MS2"	"0"	"87.5"	"100.000"	"77.6886"	"26553"	"26553"	"26540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.7"	""	"103.4"	""	"123.9"	""	"150.5"	""	"157.6"	"183.2"	""	"878"	"56"	"36.000"	"29.000"	"0.000103863874719625"	""	"0"	"3.754E-06"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"654.36145"	"1307.71562"	"1307.71568"	"-0.04"	"-0.00003"	"9/82"	"9"	"82"	"1973698.69543457"	"HCD"	"MS2"	"0"	"96.8"	"100.000"	"77.9764"	"26670"	"26670"	"26653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.8"	""	"110.5"	""	"130.9"	""	"163.7"	"2.6"	"174.9"	"214.6"	""	"878"	"53"	"36.000"	"29.000"	"0.000221546309630389"	""	"0"	"1.6E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEIVADTFR"	"[R].gAEIVADTFR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"654.36151"	"1307.71575"	"1307.71568"	"0.05"	"0.00003"	"8/82"	"8"	"82"	"1540752.47027588"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"78.1142"	"26753"	"26753"	"26742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.8"	""	"81.9"	""	"107.9"	""	"128.1"	"0.2"	"135.6"	"159.7"	""	"878"	"49"	"36.000"	"29.000"	"0.0005087032593521"	""	"0"	"6.98E-06"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFNAPSHIR"	"[R].hFNAPSHIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"654.36212"	"1307.71697"	"1307.71702"	"-0.04"	"-0.00003"	"6/76"	"6"	"76"	"191431.284484863"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"24.7823"	"5147"	"5147"	"5121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"20.8"	""	"27.2"	""	"27.8"	""	"23.2"	"21.7"	""	"873"	"27"	"36.000"	"29.000"	"0.0864936546763925"	"21"	"0.001261"	"0.009911"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASEAGDFLR"	"[R].lASEAGDFLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15589"	"Steryl-sulfatase OS=Rattus norvegicus OX=10116 GN=Sts PE=1 SV=2"	"P15589"	"Steryl-sulfatase OS=Rattus norvegicus OX=10116 GN=Sts PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"654.36292"	"1307.71855"	"1307.71568"	"2.20"	"0.00144"	"7/80"	"7"	"80"	"299436.384643555"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"94.5581"	"33361"	"33361"	"33335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"17.8"	""	"25.2"	""	"37.8"	""	"35.8"	"36.5"	""	"890"	"30"	"36.000"	"29.000"	"0.0441936641547315"	"23"	"0.0005161"	"0.006847"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LASEAGDFLR"	"[R].lASEAGDFLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15589"	"Steryl-sulfatase OS=Rattus norvegicus OX=10116 GN=Sts PE=1 SV=2"	"P15589"	"Steryl-sulfatase OS=Rattus norvegicus OX=10116 GN=Sts PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"654.36316"	"1307.71904"	"1307.71568"	"2.57"	"0.00168"	"7/80"	"7"	"80"	"237576.592895508"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"94.4606"	"33357"	"33357"	"33326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"15.8"	""	"20.5"	""	"34.1"	""	"35.0"	"25.4"	""	"887"	"25"	"36.000"	"29.000"	"0.145175598178765"	"22"	"0.002755"	"0.02929"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVDMEK"	"[K].vEVDMEk.[IA]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q56A18; Q9QUL6"	"SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 OS=Rattus norvegicus OX=10116 GN=Smarce1 PE=1 SV=1; Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"654.36652"	"1307.72576"	"1307.72811"	"-1.80"	"-0.00118"	"12/56"	"12"	"56"	"1055265.4887085"	"HCD"	"MS2"	"0"	"81.5"	"100.000"	"63.7648"	"20942"	"20942"	"20921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.2"	""	"100.9"	""	"117.6"	""	"116.1"	""	"165.2"	"165.1"	""	"835"	"32"	"36.000"	"29.000"	"0.0290841569641246"	"26"	"0.001217"	"0.009405"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQDVFTVIR"	"[K].tQDVFTVIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"654.37933"	"1307.75139"	"1307.75207"	"-0.52"	"-0.00034"	"6/88"	"6"	"88"	"252264.428527832"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"88.7196"	"31045"	"31045"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"23.2"	""	"27.1"	""	"27.2"	""	"29.6"	"33.7"	""	"815"	"30"	"36.000"	"29.000"	"0.042085027284777"	"15"	"0.001951"	"0.01702"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIANTVELR"	"[R].yIANTVELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"654.37933"	"1307.75139"	"1307.75207"	"-0.52"	"-0.00034"	"7/78"	"7"	"78"	"746549.992004395"	"HCD"	"MS2"	"49.44594"	"46.3"	"100.000"	"70.4161"	"23641"	"23641"	"23616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"54.3"	""	"55.9"	""	"85.3"	""	"101.2"	"87.5"	""	"815"	"55"	"36.000"	"29.000"	"0.000142931388635672"	"23"	"0"	"0.0002098"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQDVFTVIR"	"[K].tQDVFTVIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"654.37952"	"1307.75176"	"1307.75207"	"-0.24"	"-0.00016"	"6/88"	"6"	"88"	"188231.538391113"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"88.7555"	"31020"	"31020"	"30994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"20.0"	""	"22.5"	""	"20.4"	""	"24.4"	"23.4"	""	"815"	"34"	"36.000"	"29.000"	"0.0154215353272216"	"23"	"0.0001991"	"0.005717"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQDVFTVIR"	"[K].tQDVFTVIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"654.37970"	"1307.75212"	"1307.75207"	"0.04"	"0.00003"	"7/88"	"7"	"88"	"635952.679260254"	"HCD"	"MS2"	"34.77122"	"37.4"	"100.000"	"89.0393"	"31135"	"31135"	"31119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"41.6"	""	"41.9"	""	"61.1"	""	"85.4"	"82.3"	""	"815"	"29"	"36.000"	"29.000"	"0.05599221048176"	"18"	"0.0001991"	"0.003996"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIANTVELR"	"[R].yIANTVELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"654.37982"	"1307.75237"	"1307.75207"	"0.23"	"0.00015"	"7/78"	"7"	"78"	"2461484.98052979"	"HCD"	"MS2"	"0"	"117.4"	"100.000"	"70.7043"	"23758"	"23758"	"23741"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.6"	""	"141.6"	""	"139.3"	""	"202.8"	""	"243.3"	"247.0"	""	"815"	"61"	"36.000"	"29.000"	"3.46041043577298E-05"	"23"	"0"	"0.0001406"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIANTVELR"	"[R].yIANTVELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"654.37982"	"1307.75237"	"1307.75207"	"0.23"	"0.00015"	"7/78"	"7"	"78"	"2444650.55151367"	"HCD"	"MS2"	"1.674869"	"115.0"	"100.000"	"70.6358"	"23697"	"23697"	"23684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.6"	""	"131.4"	""	"142.4"	""	"200.1"	""	"244.0"	"244.6"	""	"815"	"61"	"36.000"	"29.000"	"3.42079944506655E-05"	"24"	"0"	"0.0001442"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIANTVELR"	"[R].yIANTVELR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"654.37994"	"1307.75261"	"1307.75207"	"0.42"	"0.00027"	"7/78"	"7"	"78"	"727787.674743652"	"HCD"	"MS2"	"26.76915"	"44.2"	"100.000"	"70.3315"	"23573"	"23573"	"23552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"56.9"	""	"53.7"	""	"75.2"	""	"89.3"	"96.0"	""	"815"	"51"	"36.000"	"29.000"	"0.000315593182604527"	"22"	"0"	"9.426E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVNGVASK"	"[K].sSVnGVASk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"654.38287"	"1307.75847"	"1307.75710"	"1.05"	"0.00068"	"8/88"	"8"	"88"	"722630.389465332"	"HCD"	"MS2"	"0"	"59.1"	"100.000"	"35.7225"	"9528"	"9528"	"9504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.4"	""	"72.8"	""	"78.7"	""	"89.6"	"1.4"	"115.6"	"123.5"	""	"710"	"36"	"35.000"	"28.000"	"0.00916702367675281"	"21"	"0"	"6.275E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVNGVASK"	"[K].sSVnGVASk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"654.38312"	"1307.75896"	"1307.75710"	"1.42"	"0.00093"	"7/88"	"7"	"88"	"659321.602966309"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"35.5344"	"9489"	"9489"	"9464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.3"	""	"58.2"	""	"70.5"	""	"82.1"	"0.1"	"98.3"	"108.7"	""	"707"	"33"	"35.000"	"28.000"	"0.016958577409307"	"19"	"0"	"0.0003447"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEMEK"	"[K].aLIEmEk.[Q]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"654.38525"	"1307.76323"	"1307.76450"	"-0.97"	"-0.00063"	"6/52"	"6"	"52"	"971500.536315918"	"HCD"	"MS2"	"30.22429"	"76.2"	"100.000"	"53.6468"	"16802"	"16802"	"16777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.8"	""	"80.2"	""	"77.7"	""	"181.5"	"2.5"	"146.0"	"147.8"	""	"768"	"24"	"35.000"	"28.000"	"0.158610240764222"	"27"	"0.009239"	"0.1189"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQGPVYK"	"[R].aSQGPVYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"654.38782"	"1307.76836"	"1307.77236"	"-3.06"	"-0.00200"	"6/66"	"6"	"66"	"919131.762878418"	"HCD"	"MS2"	"0"	"79.0"	"100.000"	"37.6935"	"10361"	"10361"	"10340"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.4"	""	"110.3"	""	"112.8"	""	"120.7"	"1.5"	"138.6"	"138.4"	""	"688"	"31"	"35.000"	"28.000"	"0.0281551887118367"	"23"	"0.002711"	"0.02843"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATPYGGVK"	"[R].gATPYGGVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"654.38885"	"1307.77043"	"1307.77236"	"-1.47"	"-0.00096"	"13/64"	"13"	"64"	"1455934.77258301"	"HCD"	"MS2"	"24.37014"	"123.0"	"100.000"	"42.7754"	"12420"	"12420"	"12398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.5"	""	"141.7"	""	"153.5"	""	"204.1"	"1.1"	"256.2"	"262.6"	""	"654"	"51"	"35.000"	"28.000"	"0.000251505653973721"	"27"	"0.0004582"	"0.006486"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVNGVASK"	"[K].sSVnGVASk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"654.38892"	"1307.77056"	"1307.75710"	"10.29"	"0.00673"	"8/88"	"8"	"88"	"744337.386657715"	"HCD"	"MS2"	"45.74751"	"66.1"	"100.000"	"38.1626"	"10517"	"10517"	"10486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.4"	""	"76.3"	""	"103.6"	""	"96.3"	"1.4"	"122.3"	"126.7"	""	"653"	"35"	"35.000"	"28.000"	"0.00986014236711257"	"23"	"0.0001686"	"0.001194"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GATPYGGVK"	"[R].gATPYGGVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"654.38892"	"1307.77056"	"1307.77236"	"-1.38"	"-0.00090"	"12/64"	"12"	"64"	"1458535.33178711"	"HCD"	"MS2"	"41.57148"	"119.7"	"100.000"	"42.9341"	"12451"	"12451"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.6"	""	"128.2"	""	"147.7"	""	"198.9"	""	"250.5"	"258.7"	""	"653"	"46"	"35.000"	"28.000"	"0.000882842405881537"	"25"	"0.0001991"	"0.004271"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASQGPVYK"	"[R].aSQGPVYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"654.38940"	"1307.77153"	"1307.77236"	"-0.63"	"-0.00041"	"6/66"	"6"	"66"	"1242661.29064941"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"37.8179"	"10376"	"10376"	"10349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.6"	""	"142.3"	""	"137.3"	""	"163.8"	""	"185.9"	"194.5"	""	"664"	"23"	"35.000"	"28.000"	"0.169487659991835"	"18"	"0.0001991"	"0.003263"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFQELGK"	"[K].qFQELGk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"654.38947"	"1307.77165"	"1307.77236"	"-0.54"	"-0.00035"	"10/60"	"10"	"60"	"914496.600585938"	"HCD"	"MS2"	"13.74618"	"84.5"	"100.000"	"61.1690"	"19858"	"19858"	"19834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.6"	""	"129.9"	""	"108.8"	""	"123.8"	"1.1"	"153.6"	"143.1"	""	"664"	"23"	"35.000"	"28.000"	"0.166011465612357"	"25"	"0.002508"	"0.02347"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVNGVASK"	"[K].sSVnGVASk.[S]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"654.39032"	"1307.77336"	"1307.75710"	"12.43"	"0.00813"	"8/88"	"8"	"88"	"931939.303649902"	"HCD"	"MS2"	"8.865858"	"88.3"	"100.000"	"38.0222"	"10495"	"10495"	"10471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.5"	""	"115.1"	""	"133.1"	""	"132.3"	""	"158.3"	"167.3"	""	"640"	"24"	"35.000"	"28.000"	"0.11944005049463"	"27"	"0.0001686"	"0.001726"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFYPTLR"	"[R].eGPFYPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"654.86108"	"1308.71489"	"1308.71495"	"-0.05"	"-0.00003"	"6/76"	"6"	"76"	"1823453.07397461"	"HCD"	"MS2"	"0"	"105.3"	"100.000"	"80.9373"	"27902"	"27902"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.9"	""	"139.1"	""	"151.5"	""	"177.5"	""	"190.4"	"204.3"	""	"860"	"34"	"36.000"	"29.000"	"0.0165374466279502"	"18"	"0"	"0.0003543"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFYPTLR"	"[R].eGPFYPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"654.86133"	"1308.71538"	"1308.71495"	"0.33"	"0.00021"	"6/76"	"6"	"76"	"1898941.26586914"	"HCD"	"MS2"	"0.9136137"	"113.2"	"100.000"	"80.8985"	"27860"	"27860"	"27843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.4"	""	"143.4"	""	"156.7"	""	"185.8"	""	"209.4"	"221.5"	""	"866"	"34"	"36.000"	"29.000"	"0.0179675100460679"	"18"	"0.0001686"	"0.001907"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPFYPTLR"	"[R].eGPFYPTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"Q4G009"	"Malignant T-cell-amplified sequence 1 OS=Rattus norvegicus OX=10116 GN=Mcts1 PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"654.86169"	"1308.71611"	"1308.71495"	"0.89"	"0.00058"	"6/76"	"6"	"76"	"714945.665344238"	"HCD"	"MS2"	"6.780315"	"43.6"	"100.000"	"80.6099"	"27742"	"27742"	"27721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.6"	""	"60.8"	""	"63.0"	""	"72.2"	""	"74.1"	"82.6"	""	"872"	"27"	"36.000"	"29.000"	"0.0869934369326431"	"21"	"0.0001991"	"0.003639"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"436.91196"	"1308.72132"	"1308.72336"	"-1.56"	"-0.00068"	"5/62"	"5"	"62"	"2232292.16027832"	"HCD"	"MS2"	"0"	"91.2"	"100.000"	"43.9015"	"12845"	"12845"	"12825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.8"	""	"94.8"	""	"115.0"	""	"193.3"	"2.6"	"170.7"	"182.6"	""	"888"	"32"	"36.000"	"29.000"	"0.0296744699400465"	"23"	"0.009751"	"0.1295"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"654.86493"	"1308.72258"	"1308.72336"	"-0.59"	"-0.00039"	"6/62"	"6"	"62"	"685136.802612305"	"HCD"	"MS2"	"19.38859"	"54.3"	"100.000"	"52.6157"	"16415"	"16415"	"16388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.3"	""	"62.8"	""	"74.6"	""	"98.9"	"1.2"	"109.8"	"97.8"	""	"878"	"25"	"36.000"	"29.000"	"0.139144011627609"	"22"	"0.008289"	"0.1057"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"654.86505"	"1308.72283"	"1308.72336"	"-0.41"	"-0.00027"	"6/62"	"6"	"62"	"2209375.31311035"	"HCD"	"MS2"	"15.65742"	"140.3"	"100.000"	"43.8051"	"12806"	"12806"	"12788"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.7"	""	"141.1"	""	"132.9"	""	"331.2"	""	"292.3"	"272.0"	""	"870"	"22"	"36.000"	"29.000"	"0.273835189542881"	"22"	"0.006958"	"0.08791"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"654.86505"	"1308.72283"	"1308.72336"	"-0.41"	"-0.00027"	"6/62"	"6"	"62"	"4510728.86431885"	"HCD"	"MS2"	"0"	"280.5"	"100.000"	"43.9646"	"12907"	"12907"	"12890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"325.9"	""	"247.3"	""	"288.2"	""	"642.7"	"0.3"	"566.0"	"594.4"	""	"870"	"22"	"36.000"	"29.000"	"0.248021458442125"	"22"	"0.005266"	"0.0674"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"654.86517"	"1308.72307"	"1308.72336"	"-0.22"	"-0.00014"	"6/62"	"6"	"62"	"701134.504638672"	"HCD"	"MS2"	"20.10404"	"61.5"	"100.000"	"54.0195"	"16954"	"16954"	"16931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.8"	""	"76.8"	""	"86.0"	""	"103.1"	""	"111.3"	"119.2"	""	"870"	"22"	"36.000"	"29.000"	"0.265759780833924"	"21"	"0.009005"	"0.1165"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"654.86523"	"1308.72319"	"1308.72336"	"-0.13"	"-0.00008"	"5/62"	"5"	"62"	"674861.531555176"	"HCD"	"MS2"	"23.83163"	"59.0"	"100.000"	"59.6217"	"19228"	"19228"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.6"	""	"72.2"	""	"82.9"	""	"101.0"	""	"108.9"	"113.5"	""	"865"	"17"	"36.000"	"29.000"	"0.80535268660669"	"19"	"0.007443"	"0.09566"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQEAEK"	"[R].mVQEAEk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"654.86530"	"1308.72331"	"1308.72336"	"-0.03"	"-0.00002"	"6/60"	"6"	"60"	"3020771.12921143"	"HCD"	"MS2"	"0"	"194.8"	"100.000"	"29.7537"	"7124"	"7124"	"7106"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.5"	""	"156.0"	""	"195.0"	""	"539.9"	"1.0"	"356.2"	"354.0"	""	"870"	"18"	"36.000"	"29.000"	"0.750739483015739"	"18"	"0.008485"	"0.1075"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVNDMK"	"[R].dLVNDmk.[S]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"654.86536"	"1308.72344"	"1308.72336"	"0.06"	"0.00004"	"6/62"	"6"	"62"	"5785244.27972412"	"HCD"	"MS2"	"0"	"322.9"	"100.000"	"44.1180"	"12933"	"12933"	"12913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"367.7"	""	"286.3"	""	"341.4"	""	"763.8"	""	"640.0"	"670.6"	""	"870"	"21"	"36.000"	"29.000"	"0.339226098077618"	"22"	"0.0065"	"0.08086"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGFVPAAYVK"	"[R].QGFVPAAYVk.[K]"	"K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"654.87872"	"1308.75017"	"1308.75134"	"-0.89"	"-0.00058"	"5/92"	"5"	"92"	"552072.147033691"	"HCD"	"MS2"	"36.25561"	"19.7"	"100.000"	"110.3599"	"39653"	"39653"	"39623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"31.0"	""	"26.1"	""	"25.0"	""	"38.0"	"42.1"	""	"747"	"28"	"35.000"	"28.000"	"0.0553720504802014"	"18"	"0.00452"	"0.05258"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAQDFK"	"[R].eIAQDFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"654.88098"	"1308.75469"	"1308.75637"	"-1.29"	"-0.00084"	"12/62"	"12"	"62"	"2579004.42553711"	"HCD"	"MS2"	"12.01426"	"221.0"	"100.000"	"65.0596"	"21467"	"21467"	"21449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.1"	""	"131.2"	""	"142.3"	""	"361.8"	"0.3"	"671.1"	"652.7"	""	"694"	"35"	"35.000"	"28.000"	"0.0101468087511164"	""	"0.001348"	"0.0107"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAQDFK"	"[R].eIAQDFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"436.92310"	"1308.75473"	"1308.75637"	"-1.25"	"-0.00055"	"5/62"	"5"	"62"	"414361.056640625"	"HCD"	"MS2"	"32.11093"	"22.2"	"100.000"	"65.4172"	"21580"	"21580"	"21551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"16.9"	""	"23.1"	""	"35.7"	"1.9"	"57.0"	"58.5"	""	"694"	"28"	"35.000"	"28.000"	"0.0582544994288529"	"25"	"0.001872"	"0.01582"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAQDFK"	"[R].eIAQDFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"654.88110"	"1308.75493"	"1308.75637"	"-1.10"	"-0.00072"	"4/62"	"4"	"62"	"4691603.14379883"	"HCD"	"MS2"	"26.67635"	"362.4"	"100.000"	"65.3483"	"21552"	"21552"	"21535"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.6"	""	"230.4"	""	"251.7"	""	"511.4"	""	"1069.4"	"1169.3"	""	"694"	"22"	"35.000"	"28.000"	"0.204328748408389"	"22"	"0.003984"	"0.04366"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAQDFK"	"[R].eIAQDFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"654.88123"	"1308.75517"	"1308.75637"	"-0.92"	"-0.00060"	"12/62"	"12"	"62"	"2118956.4888916"	"HCD"	"MS2"	"14.21595"	"175.6"	"100.000"	"65.0489"	"21429"	"21429"	"21410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.2"	""	"100.2"	""	"117.6"	""	"270.6"	"0.5"	"547.9"	"515.5"	""	"697"	"35"	"35.000"	"28.000"	"0.0104280422585795"	""	"0.001348"	"0.01138"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVNQLHER"	"[K].aLVNQLHER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"436.92358"	"1308.75620"	"1308.75855"	"-1.80"	"-0.00078"	"4/74"	"4"	"74"	"2625405.08996582"	"HCD"	"MS2"	"30.97851"	"112.4"	"100.000"	"35.9336"	"9614"	"9614"	"9589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.9"	""	"149.5"	""	"152.9"	""	"194.5"	""	"218.6"	"226.7"	""	"698"	"20"	"35.000"	"28.000"	"0.358777688046139"	"19"	"0.0001991"	"0.003907"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAQDFK"	"[R].eIAQDFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"654.88177"	"1308.75627"	"1308.75637"	"-0.08"	"-0.00005"	"12/62"	"12"	"62"	"4488783.48834229"	"HCD"	"MS2"	"26.33133"	"352.1"	"100.000"	"65.3472"	"21585"	"21585"	"21568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.7"	""	"220.1"	""	"256.5"	""	"503.9"	""	"1035.9"	"1125.4"	""	"698"	"23"	"35.000"	"28.000"	"0.18613387852518"	"22"	"0.003317"	"0.03664"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAQDFK"	"[R].eIAQDFk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2;Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"P84245; Q6LED0"	"Histone H3.3 OS=Rattus norvegicus OX=10116 GN=H3f3b PE=1 SV=2; Histone H3.1 OS=Rattus norvegicus OX=10116 PE=1 SV=3"	"0"	"3"	"3"	"0.4800"	"0.0000"	"1"	"1"	"1"	"436.92371"	"1308.75656"	"1308.75637"	"0.15"	"0.00006"	"5/62"	"5"	"62"	"477144.290405273"	"HCD"	"MS2"	"30.53342"	"24.9"	"100.000"	"65.3424"	"21583"	"21583"	"21552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.6"	""	"15.5"	""	"15.8"	""	"43.0"	"0.3"	"76.7"	"66.5"	""	"696"	"25"	"35.000"	"28.000"	"0.10509431986999"	"27"	"0.001596"	"0.01294"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"655.35010"	"1309.69292"	"1309.69495"	"-1.55"	"-0.00101"	"6/86"	"6"	"86"	"1817281.98626709"	"HCD"	"MS2"	"0"	"104.2"	"100.000"	"56.7048"	"18074"	"18074"	"18063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.7"	""	"130.1"	""	"120.0"	""	"150.3"	""	"227.8"	"228.8"	""	"733"	"32"	"35.000"	"28.000"	"0.0216807338925311"	"23"	"9.9E-05"	"0.0006071"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"655.35022"	"1309.69316"	"1309.69495"	"-1.36"	"-0.00089"	"6/86"	"6"	"86"	"1619770.62835693"	"HCD"	"MS2"	"16.00474"	"100.7"	"100.000"	"57.0407"	"18176"	"18176"	"18156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.7"	""	"131.3"	""	"116.0"	""	"141.6"	"0.2"	"207.1"	"226.7"	""	"731"	"28"	"35.000"	"28.000"	"0.0598256438581864"	"16"	"9.9E-05"	"0.0005395"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"655.35059"	"1309.69390"	"1309.69495"	"-0.80"	"-0.00053"	"14/86"	"14"	"86"	"3099193.99755859"	"HCD"	"MS2"	"4.647782"	"165.7"	"100.000"	"56.7519"	"18058"	"18058"	"18043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.8"	""	"192.7"	""	"188.1"	""	"239.8"	"1.7"	"364.8"	"374.3"	""	"755"	"40"	"35.000"	"28.000"	"0.0039256986260047"	"24"	"0"	"0.0003518"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYITGDELR"	"[K].nYITGDELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"655.35077"	"1309.69426"	"1309.69495"	"-0.52"	"-0.00034"	"14/86"	"14"	"86"	"3103720.64813232"	"HCD"	"MS2"	"5.975713"	"157.9"	"100.000"	"56.4185"	"17959"	"17959"	"17945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.0"	""	"175.6"	""	"177.8"	""	"232.3"	"2.5"	"354.4"	"356.2"	""	"764"	"41"	"35.000"	"28.000"	"0.00274829509597413"	"25"	"9.9E-05"	"0.0005194"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIIGESMSR"	"[R].sTIIGESMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"655.35199"	"1309.69670"	"1309.69832"	"-1.23"	"-0.00081"	"7/88"	"7"	"88"	"2336355.51031494"	"HCD"	"MS2"	"10.91918"	"122.6"	"100.000"	"51.1093"	"15806"	"15806"	"15782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.5"	""	"173.2"	""	"181.3"	""	"156.2"	""	"225.8"	"241.0"	""	"745"	"44"	"35.000"	"28.000"	"0.00150357908880433"	"18"	"0"	"3.499E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIIGESMSR"	"[R].sTIIGESMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"655.35229"	"1309.69731"	"1309.69832"	"-0.77"	"-0.00050"	"9/88"	"9"	"88"	"2501531.29510498"	"HCD"	"MS2"	"0"	"128.5"	"100.000"	"51.4511"	"15908"	"15908"	"15885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.3"	""	"192.8"	""	"197.9"	""	"137.5"	""	"228.7"	"260.8"	""	"747"	"40"	"35.000"	"28.000"	"0.00358336135871201"	"21"	"0"	"4.691E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIIGESMSR"	"[R].sTIIGESMSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"655.35321"	"1309.69914"	"1309.69832"	"0.63"	"0.00041"	"14/88"	"14"	"88"	"1044952.29882813"	"HCD"	"MS2"	"40.49734"	"82.7"	"100.000"	"51.4288"	"15932"	"15932"	"15911"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.6"	""	"97.8"	""	"111.6"	""	"144.5"	"2.3"	"145.3"	"149.9"	""	"755"	"14"	"35.000"	"28.000"	"1.52727399115785"	"15"	"0.0001686"	"0.001732"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"437.24823"	"1309.73014"	"1309.73133"	"-0.91"	"-0.00040"	"13/88"	"13"	"88"	"606852.417297363"	"HCD"	"MS2"	"14.67394"	"18.5"	"100.000"	"68.5105"	"22866"	"22866"	"22842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"15.7"	""	"27.0"	""	"27.6"	""	"47.1"	"39.4"	""	"768"	"49"	"35.000"	"28.000"	"0.000513252678353833"	"27"	"0"	"8.85E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"655.36890"	"1309.73052"	"1309.73133"	"-0.62"	"-0.00041"	"8/88"	"8"	"88"	"2462327.45013428"	"HCD"	"MS2"	"6.429376"	"130.4"	"100.000"	"68.1490"	"22718"	"22718"	"22699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.7"	""	"171.8"	""	"166.0"	""	"238.2"	""	"243.8"	"256.6"	""	"780"	"64"	"35.000"	"28.000"	"1.43901263442359E-05"	"20"	"0"	"9.988E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"655.36896"	"1309.73064"	"1309.73133"	"-0.53"	"-0.00035"	"8/88"	"8"	"88"	"726452.33203125"	"HCD"	"MS2"	"59.68743"	"51.4"	"100.000"	"68.9863"	"23026"	"23026"	"23001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.3"	""	"61.4"	""	"61.7"	""	"88.5"	"0.5"	"97.4"	"99.9"	""	"780"	"40"	"35.000"	"28.000"	"0.00371590503969224"	"19"	"0"	"3.386E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"655.36896"	"1309.73064"	"1309.73133"	"-0.53"	"-0.00035"	"8/88"	"8"	"88"	"3012671.98449707"	"HCD"	"MS2"	"0"	"142.7"	"100.000"	"68.6775"	"22901"	"22901"	"22886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.2"	""	"185.7"	""	"182.2"	""	"240.3"	"3.0"	"288.3"	"283.6"	""	"780"	"62"	"35.000"	"28.000"	"2.3936718201427E-05"	"18"	"0"	"3.758E-06"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"655.36896"	"1309.73064"	"1309.73133"	"-0.53"	"-0.00035"	"8/88"	"8"	"88"	"10051487.8817139"	"HCD"	"MS2"	"0"	"368.5"	"90.216"	"68.3804"	"22781"	"22781"	"22764"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"491.7"	""	"510.3"	""	"472.3"	""	"615.0"	""	"699.1"	"707.6"	""	"780"	"62"	"35.000"	"28.000"	"2.24421575561491E-05"	"22"	"0"	"8.268E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"437.24841"	"1309.73069"	"1309.73133"	"-0.49"	"-0.00022"	"11/88"	"11"	"88"	"281308.953979492"	"HCD"	"MS2"	"38.66933"	"13.7"	"100.000"	"68.6613"	"22895"	"22895"	"22876"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"16.8"	""	"14.8"	""	"24.3"	""	"25.0"	"34.3"	""	"779"	"35"	"35.000"	"28.000"	"0.0115214585572183"	"22"	"9.9E-05"	"0.0008001"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"655.36902"	"1309.73076"	"1309.73133"	"-0.44"	"-0.00029"	"8/88"	"8"	"88"	"2266381.00543213"	"HCD"	"MS2"	"1.58108"	"114.5"	"100.000"	"68.7709"	"22972"	"22972"	"22954"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.3"	""	"137.7"	""	"153.0"	""	"194.5"	""	"233.5"	"227.2"	""	"777"	"64"	"35.000"	"28.000"	"1.42033576541699E-05"	"21"	"0"	"1.196E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEISGTFTR"	"[K].gLEISGTFTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"655.36908"	"1309.73088"	"1309.73133"	"-0.34"	"-0.00022"	"7/84"	"7"	"84"	"435838.162780762"	"HCD"	"MS2"	"35.70715"	"27.2"	"100.000"	"79.8228"	"27422"	"27422"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"33.1"	""	"40.4"	""	"48.2"	""	"49.1"	"52.3"	""	"777"	"25"	"35.000"	"28.000"	"0.112561798382197"	"15"	"9.9E-05"	"0.0007364"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"655.36920"	"1309.73113"	"1309.73133"	"-0.16"	"-0.00010"	"8/88"	"8"	"88"	"9882227.27655029"	"HCD"	"MS2"	"0.1909721"	"398.8"	"100.000"	"68.4530"	"22843"	"22843"	"22826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"512.4"	""	"518.2"	""	"520.2"	""	"675.3"	"2.0"	"752.4"	"802.0"	""	"777"	"65"	"35.000"	"28.000"	"1.35641012563431E-05"	"22"	"0"	"6.144E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STIGVEFATR"	"[K].sTIGVEFATR.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"655.36926"	"1309.73125"	"1309.73133"	"-0.06"	"-0.00004"	"8/88"	"8"	"88"	"2174617.45452881"	"HCD"	"MS2"	"3.980901"	"117.4"	"100.000"	"68.0875"	"22661"	"22661"	"22643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.3"	""	"151.6"	""	"153.5"	""	"205.2"	""	"227.7"	"218.8"	""	"779"	"64"	"35.000"	"28.000"	"1.40769141498129E-05"	"19"	"0"	"2.866E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVAEIEK"	"[K].yVAEIEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"655.39069"	"1309.77410"	"1309.77677"	"-2.05"	"-0.00134"	"6/52"	"6"	"52"	"2739905.97351074"	"HCD"	"MS2"	"48.02413"	"194.1"	"100.000"	"66.2368"	"21914"	"21914"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.6"	""	"191.3"	""	"214.8"	""	"372.7"	""	"439.7"	"437.6"	""	"566"	"32"	"34.000"	"27.000"	"0.0185689110363722"	"23"	"0.001615"	"0.01323"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVHIVR"	"[K].tLAGDVHIVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"437.26312"	"1309.77481"	"1309.77895"	"-3.16"	"-0.00138"	"13/80"	"13"	"80"	"4018629.74578857"	"HCD"	"MS2"	"54.6151"	"126.5"	"100.000"	"48.5612"	"14734"	"14734"	"14718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.2"	""	"162.5"	""	"181.2"	""	"204.3"	""	"233.4"	"257.9"	""	"558"	"33"	"34.000"	"27.000"	"0.0155454823952008"	"15"	"0"	"0.0002335"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVAEIEK"	"[K].yVAEIEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"655.39136"	"1309.77544"	"1309.77677"	"-1.02"	"-0.00067"	"6/52"	"6"	"52"	"3299646.36053467"	"HCD"	"MS2"	"52.71027"	"235.1"	"100.000"	"66.2952"	"21971"	"21971"	"21953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"244.2"	""	"212.0"	""	"257.1"	""	"446.7"	""	"550.2"	"534.2"	""	"568"	"32"	"34.000"	"27.000"	"0.0183365801045842"	"23"	"0.001261"	"0.009681"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVAEIEK"	"[K].yVAEIEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"655.39154"	"1309.77580"	"1309.77677"	"-0.74"	"-0.00048"	"12/52"	"12"	"52"	"2754977.35772705"	"HCD"	"MS2"	"27.1406"	"213.9"	"100.000"	"66.5162"	"22025"	"22025"	"22017"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.6"	""	"186.7"	""	"247.7"	""	"366.6"	""	"523.5"	"508.0"	""	"568"	"34"	"34.000"	"27.000"	"0.0111511161653486"	""	"0.0008247"	"0.007634"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVAEIEK"	"[K].yVAEIEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"655.39160"	"1309.77593"	"1309.77677"	"-0.65"	"-0.00042"	"12/52"	"12"	"52"	"2104417.84936523"	"HCD"	"MS2"	"26.17742"	"161.9"	"100.000"	"66.5655"	"22078"	"22078"	"22066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.8"	""	"130.4"	""	"190.9"	""	"285.5"	""	"370.1"	"409.3"	""	"568"	"36"	"34.000"	"27.000"	"0.00787622909721123"	""	"0.001103"	"0.009107"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVHIVR"	"[K].tLAGDVHIVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"0.9322"	"0.0000"	"1"	"1"	"1"	"437.26389"	"1309.77710"	"1309.77895"	"-1.41"	"-0.00062"	"12/80"	"12"	"80"	"10168193.2536011"	"HCD"	"MS2"	"3.911888"	"248.1"	"100.000"	"48.8488"	"14852"	"14852"	"14835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"336.3"	""	"330.2"	""	"357.1"	""	"404.0"	""	"449.7"	"476.9"	""	"544"	"59"	"34.000"	"27.000"	"3.30041767326474E-05"	"20"	"0"	"3.819E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVHIVR"	"[K].tLAGDVHIVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"437.26395"	"1309.77729"	"1309.77895"	"-1.27"	"-0.00055"	"12/80"	"12"	"80"	"9740405.44067383"	"HCD"	"MS2"	"4.015472"	"238.8"	"100.000"	"48.5508"	"14767"	"14767"	"14750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.6"	""	"319.6"	""	"334.4"	""	"384.3"	""	"447.6"	"458.0"	""	"544"	"52"	"34.000"	"27.000"	"0.000161647467143436"	"16"	"0"	"4.291E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLAGDVHIVR"	"[K].tLAGDVHIVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"437.26410"	"1309.77774"	"1309.77895"	"-0.92"	"-0.00040"	"11/80"	"11"	"80"	"4406614.31542969"	"HCD"	"MS2"	"48.3731"	"134.8"	"100.000"	"48.2616"	"14650"	"14650"	"14632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.2"	""	"186.3"	""	"183.7"	""	"195.2"	""	"270.8"	"263.1"	""	"539"	"37"	"34.000"	"27.000"	"0.00581512118266644"	"17"	"0"	"0.000217"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLTAQAPQR"	"[R].vPLTAQAPQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"655.39349"	"1309.77971"	"1309.77895"	"0.58"	"0.00038"	"8/80"	"8"	"80"	"1278358.03076172"	"HCD"	"MS2"	"33.7064"	"65.6"	"100.000"	"47.0502"	"14157"	"14157"	"14129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"76.0"	""	"74.6"	""	"127.4"	"0.7"	"142.5"	"133.7"	""	"523"	"19"	"34.000"	"27.000"	"0.348715854510709"	"14"	"0.001615"	"0.01451"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLTAQAPQR"	"[R].vPLTAQAPQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"Q9WVR7"	"Protein phosphatase 1F OS=Rattus norvegicus OX=10116 GN=Ppm1f PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.39392"	"1309.78057"	"1309.77895"	"1.23"	"0.00081"	"8/80"	"8"	"80"	"1267705.4934082"	"HCD"	"MS2"	"35.75183"	"65.4"	"100.000"	"47.3816"	"14254"	"14254"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.1"	""	"71.3"	""	"83.2"	""	"119.3"	""	"136.5"	"135.6"	""	"509"	"20"	"34.000"	"27.000"	"0.273960396868793"	"14"	"9.9E-05"	"0.0008493"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDADEK"	"[R].fQDADEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"655.85309"	"1310.69890"	"1310.69925"	"-0.27"	"-0.00018"	"5/64"	"5"	"64"	"698975.682067871"	"HCD"	"MS2"	"0"	"73.9"	"100.000"	"43.3758"	"12666"	"12666"	"12635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.5"	""	"76.7"	""	"66.9"	""	"131.5"	""	"177.6"	"176.7"	""	"728"	"23"	"35.000"	"28.000"	"0.164097280453091"	"22"	"0.007642"	"0.09738"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQDADEK"	"[R].fQDADEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"655.85352"	"1310.69975"	"1310.69925"	"0.38"	"0.00025"	"6/64"	"6"	"64"	"721357.277526855"	"HCD"	"MS2"	"28.96791"	"75.7"	"100.000"	"43.5757"	"12713"	"12713"	"12688"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.0"	""	"75.0"	""	"84.7"	""	"133.0"	""	"169.2"	"169.7"	""	"730"	"23"	"35.000"	"28.000"	"0.178769269069483"	""	"0.006542"	"0.08111"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAFQAEVNR"	"[K].fAFQAEVNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"655.85541"	"1310.70354"	"1310.70545"	"-1.46"	"-0.00096"	"7/74"	"7"	"74"	"878956.574951172"	"HCD"	"MS2"	"51.60751"	"44.0"	"100.000"	"77.1016"	"26318"	"26318"	"26305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"52.3"	""	"54.5"	""	"76.2"	"1.8"	"96.2"	"88.1"	""	"744"	"8"	"35.000"	"28.000"	"6.20215963068994"	"16"	"0.004819"	"0.05807"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAFQAEVNR"	"[K].fAFQAEVNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"655.85596"	"1310.70464"	"1310.70545"	"-0.62"	"-0.00041"	"7/74"	"7"	"74"	"1665711.78771973"	"HCD"	"MS2"	"21.11272"	"83.9"	"100.000"	"76.7784"	"26190"	"26190"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.2"	""	"109.2"	""	"124.1"	""	"138.6"	""	"156.2"	"150.0"	""	"762"	"29"	"35.000"	"28.000"	"0.044047876427519"	"16"	"0.0001686"	"0.00108"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAFQAEVNR"	"[K].fAFQAEVNR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"655.85602"	"1310.70476"	"1310.70545"	"-0.53"	"-0.00035"	"7/74"	"7"	"74"	"1776285.05841064"	"HCD"	"MS2"	"21.96693"	"89.6"	"100.000"	"76.9196"	"26278"	"26278"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.9"	""	"120.3"	""	"129.6"	""	"148.7"	""	"161.1"	"168.3"	""	"762"	"39"	"35.000"	"28.000"	"0.0052835397080019"	"16"	"0"	"0.0002177"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASSIYINSR"	"[K].aASSIYINSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"655.86603"	"1310.72478"	"1310.72658"	"-1.37"	"-0.00090"	"8/88"	"8"	"88"	"638429.636291504"	"HCD"	"MS2"	"31.08021"	"62.9"	"100.000"	"44.4919"	"13087"	"13087"	"13056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.4"	""	"80.4"	""	"91.2"	""	"98.0"	""	"106.8"	"124.6"	""	"787"	"19"	"35.000"	"28.000"	"0.548207201958977"	"16"	"0.0042"	"0.0455"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTNEDFK"	"[K].vTNEDFk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"655.87140"	"1310.73552"	"1310.73564"	"-0.09"	"-0.00006"	"5/62"	"5"	"62"	"1220105.09332275"	"HCD"	"MS2"	"17.8433"	"117.7"	"100.000"	"51.8415"	"16065"	"16065"	"16044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.2"	""	"133.0"	""	"140.3"	""	"221.0"	""	"245.9"	"231.2"	""	"698"	"14"	"35.000"	"28.000"	"1.53400023787801"	"22"	"0.00394"	"0.04334"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEEQVK"	"[K].yGEEQVk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"D3ZYR1"	"F-BAR domain only protein 2 OS=Rattus norvegicus OX=10116 GN=Fcho2 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"655.87164"	"1310.73601"	"1310.73564"	"0.28"	"0.00019"	"6/54"	"6"	"54"	"1198546.78210449"	"HCD"	"MS2"	"0"	"124.6"	"100.000"	"38.7900"	"10809"	"10809"	"10786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.5"	""	"129.3"	""	"153.6"	""	"221.6"	""	"255.6"	"247.3"	""	"697"	"31"	"35.000"	"28.000"	"0.0301441319693329"	"25"	"0.001348"	"0.01109"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSENIYK"	"[K].vSENIYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"655.88922"	"1310.77117"	"1310.77202"	"-0.65"	"-0.00043"	"6/56"	"6"	"56"	"963084.653137207"	"HCD"	"MS2"	"47.27357"	"80.3"	"100.000"	"54.2657"	"17088"	"17088"	"17063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.3"	""	"98.3"	""	"101.3"	""	"110.6"	""	"158.4"	"172.5"	""	"561"	"26"	"34.000"	"27.000"	"0.0779709571606481"	"19"	"0.001453"	"0.0116"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSENIYK"	"[K].vSENIYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"655.88934"	"1310.77141"	"1310.77202"	"-0.47"	"-0.00031"	"6/56"	"6"	"56"	"934107.255493164"	"HCD"	"MS2"	"50.99531"	"80.0"	"100.000"	"54.6153"	"17197"	"17197"	"17173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.5"	""	"95.4"	""	"117.5"	""	"126.5"	""	"149.3"	"160.7"	""	"526"	"18"	"34.000"	"27.000"	"0.392604929719276"	"18"	"0.001488"	"0.01267"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLYK"	"[K].qAETLYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"655.88959"	"1310.77190"	"1310.77202"	"-0.10"	"-0.00006"	"6/62"	"6"	"62"	"1694926.17828369"	"HCD"	"MS2"	"9.25741"	"134.0"	"100.000"	"45.7561"	"13635"	"13635"	"13608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.0"	""	"167.9"	""	"190.9"	""	"223.3"	""	"237.5"	"251.0"	""	"524"	"18"	"34.000"	"27.000"	"0.41143505473539"	"15"	"0.002588"	"0.0263"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVGVDFK"	"[K].sTVGVDFk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"655.88971"	"1310.77214"	"1310.77202"	"0.09"	"0.00006"	"8/66"	"8"	"66"	"428192.306640625"	"HCD"	"MS2"	"25.6057"	"49.2"	"100.000"	"67.7007"	"22505"	"22505"	"22483"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.0"	""	"65.3"	""	"69.2"	""	"77.7"	""	"95.5"	"94.4"	""	"524"	"19"	"34.000"	"27.000"	"0.337521382543601"	"21"	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVGVDFK"	"[K].sTVGVDFk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"655.89001"	"1310.77275"	"1310.77202"	"0.56"	"0.00036"	"9/66"	"9"	"66"	"408426.619506836"	"HCD"	"MS2"	"24.11121"	"44.5"	"100.000"	"67.7617"	"22561"	"22561"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.0"	""	"46.2"	""	"58.2"	""	"83.1"	""	"91.2"	"88.5"	""	"524"	"21"	"34.000"	"27.000"	"0.211495577925196"	"23"	"0.00329"	"0.03569"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QAETLYK"	"[K].qAETLYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.89014"	"1310.77300"	"1310.77202"	"0.74"	"0.00049"	"5/62"	"5"	"62"	"1194948.97058105"	"HCD"	"MS2"	"16.92743"	"102.7"	"100.000"	"46.0242"	"13710"	"13710"	"13685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.2"	""	"120.3"	""	"135.7"	""	"174.1"	"0.3"	"197.4"	"203.1"	""	"518"	"31"	"34.000"	"27.000"	"0.0228191658109076"	"15"	"0.0005778"	"0.007059"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYMLTLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"656.34967"	"1311.69206"	"1311.69284"	"-0.59"	"-0.00039"	"7/76"	"7"	"76"	"2356379.72302246"	"HCD"	"MS2"	"4.875997"	"120.0"	"100.000"	"78.5657"	"26937"	"26937"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.5"	""	"191.8"	""	"152.6"	""	"98.8"	"1.8"	"242.2"	"249.5"	""	"719"	"33"	"35.000"	"28.000"	"0.0200770035007891"	"22"	"0.0001686"	"0.001095"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYMLTLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"656.34973"	"1311.69219"	"1311.69284"	"-0.50"	"-0.00033"	"7/76"	"7"	"76"	"1304375.58959961"	"HCD"	"MS2"	"23.27999"	"74.7"	"100.000"	"78.2595"	"26812"	"26812"	"26797"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.1"	""	"119.2"	""	"97.1"	""	"63.2"	"1.8"	"160.9"	"148.7"	""	"719"	"36"	"35.000"	"28.000"	"0.0098106751291949"	"23"	"9.9E-05"	"0.0005778"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYMLTLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"656.34973"	"1311.69219"	"1311.69284"	"-0.50"	"-0.00033"	"7/76"	"7"	"76"	"2392833.54638672"	"HCD"	"MS2"	"9.52796"	"122.6"	"100.000"	"78.4578"	"26867"	"26867"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.4"	""	"206.6"	""	"165.1"	""	"115.7"	"2.4"	"227.8"	"244.4"	""	"719"	"32"	"35.000"	"28.000"	"0.0204502628638361"	"22"	"0.0001686"	"0.001144"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYMLTLNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"656.35004"	"1311.69280"	"1311.69284"	"-0.03"	"-0.00002"	"7/76"	"7"	"76"	"1352391.89129639"	"HCD"	"MS2"	"23.52377"	"78.4"	"100.000"	"78.1604"	"26745"	"26745"	"26726"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.8"	""	"114.2"	""	"103.9"	""	"75.3"	"2.6"	"157.9"	"152.8"	""	"709"	"34"	"35.000"	"28.000"	"0.0145082903874289"	"23"	"9.9E-05"	"0.0005721"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASSSGEGK"	"[K].mASSSGEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"656.35107"	"1311.69487"	"1311.69787"	"-2.29"	"-0.00150"	"10/72"	"10"	"72"	"271671.830871582"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"28.0918"	"6450"	"6450"	"6433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.5"	""	"29.8"	""	"35.5"	""	"29.6"	"0.9"	"53.7"	"48.4"	""	"734"	"23"	"35.000"	"28.000"	"0.178511444488766"	"18"	"0.0001991"	"0.003879"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASSSGEGK"	"[K].mASSSGEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.35187"	"1311.69646"	"1311.69787"	"-1.08"	"-0.00071"	"7/72"	"7"	"72"	"185928.497802734"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"27.9072"	"6418"	"6418"	"6399"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.4"	""	"21.8"	""	"24.5"	""	"20.6"	""	"31.7"	"36.8"	""	"756"	"9"	"35.000"	"28.000"	"4.39027576031649"	"13"	"0.009555"	"0.1278"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASSSGEGK"	"[K].mASSSGEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"656.35211"	"1311.69695"	"1311.69787"	"-0.71"	"-0.00046"	"8/72"	"8"	"72"	"1892960.25109863"	"HCD"	"MS2"	"0"	"149.7"	"100.000"	"27.6159"	"6300"	"6300"	"6284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"251.2"	""	"215.3"	""	"210.7"	""	"158.3"	""	"289.9"	"295.0"	""	"757"	"48"	"35.000"	"28.000"	"0.000605432713830652"	"25"	"0"	"4.655E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MASSSGEGK"	"[K].mASSSGEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"656.35223"	"1311.69719"	"1311.69787"	"-0.52"	"-0.00034"	"8/72"	"8"	"72"	"1009986.25140381"	"HCD"	"MS2"	"0"	"88.5"	"100.000"	"27.8004"	"6335"	"6335"	"6314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.4"	""	"113.2"	""	"128.4"	""	"99.6"	""	"165.2"	"179.7"	""	"757"	"45"	"35.000"	"28.000"	"0.00125333129481161"	"21"	"0"	"2.626E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"656.35828"	"1311.70928"	"1311.71060"	"-1.01"	"-0.00066"	"8/86"	"8"	"86"	"5460809.39245605"	"HCD"	"MS2"	"17.56416"	"259.0"	"100.000"	"46.1278"	"13752"	"13752"	"13729"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"384.0"	""	"404.6"	""	"436.1"	""	"374.3"	""	"435.8"	"415.9"	""	"729"	"44"	"35.000"	"28.000"	"0.00157288703503721"	""	"0"	"3.387E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"656.35840"	"1311.70952"	"1311.71060"	"-0.82"	"-0.00054"	"8/86"	"8"	"86"	"465705.868469238"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"46.4124"	"13866"	"13866"	"13852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.6"	""	"54.5"	""	"56.7"	""	"65.7"	""	"69.0"	"73.3"	""	"731"	"24"	"35.000"	"28.000"	"0.132705029018472"	"26"	"0.001261"	"0.01022"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTLYVGTTR"	"[R].gDTLYVGTTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"656.35883"	"1311.71037"	"1311.71060"	"-0.17"	"-0.00011"	"8/86"	"8"	"86"	"5102784.90136719"	"HCD"	"MS2"	"19.33182"	"251.8"	"100.000"	"45.8206"	"13661"	"13661"	"13637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"368.7"	""	"402.7"	""	"422.7"	""	"358.1"	""	"403.8"	"429.1"	""	"729"	"44"	"35.000"	"28.000"	"0.00158378976710538"	""	"0"	"4.88E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGYDK"	"[R].eLEGYDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"656.36359"	"1311.71990"	"1311.71965"	"0.19"	"0.00012"	"10/58"	"10"	"58"	"1097568.43188477"	"HCD"	"MS2"	"7.419096"	"102.1"	"100.000"	"51.0602"	"15752"	"15752"	"15732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.5"	""	"132.5"	""	"130.3"	""	"150.3"	""	"210.8"	"218.0"	""	"681"	"23"	"35.000"	"28.000"	"0.162598717680444"	"26"	"0.001872"	"0.01545"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGYDK"	"[R].eLEGYDk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"Q5FVI3"	"Leucine-rich repeat-containing protein 57 OS=Rattus norvegicus OX=10116 GN=Lrrc57 PE=2 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"656.36414"	"1311.72099"	"1311.71965"	"1.02"	"0.00067"	"10/58"	"10"	"58"	"893652.208679199"	"HCD"	"MS2"	"0"	"87.9"	"100.000"	"50.7046"	"15641"	"15641"	"15619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.0"	""	"111.2"	""	"118.5"	""	"126.6"	""	"181.6"	"195.3"	""	"700"	"23"	"35.000"	"28.000"	"0.19145558701289"	"25"	"0.001951"	"0.01628"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"437.92261"	"1311.75327"	"1311.75604"	"-2.11"	"-0.00092"	"5/56"	"5"	"56"	"6102737.61523438"	"HCD"	"MS2"	"44.87274"	"285.3"	"100.000"	"55.9593"	"17743"	"17743"	"17730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"485.6"	""	"457.7"	""	"426.1"	""	"379.8"	""	"491.2"	"458.3"	""	"618"	"33"	"34.000"	"27.000"	"0.0169808130022006"	"24"	"0.002559"	"0.02612"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"656.38043"	"1311.75359"	"1311.75604"	"-1.87"	"-0.00123"	"6/56"	"6"	"56"	"11549791.3434448"	"HCD"	"MS2"	"0"	"766.0"	"85.189"	"56.0836"	"17824"	"17824"	"17810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1214.3"	""	"1149.4"	""	"1117.0"	""	"1018.8"	""	"1418.3"	"1340.0"	""	"618"	"34"	"34.000"	"27.000"	"0.0129109583293806"	"21"	"0.003568"	"0.03976"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"437.92276"	"1311.75373"	"1311.75604"	"-1.76"	"-0.00077"	"9/56"	"9"	"56"	"11249149.7015991"	"HCD"	"MS2"	"11.18133"	"503.1"	"100.000"	"55.2977"	"17509"	"17509"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"875.8"	""	"826.3"	""	"715.7"	""	"685.5"	""	"881.2"	"774.9"	""	"618"	"24"	"34.000"	"27.000"	"0.110651799064715"	"22"	"0.009275"	"0.1205"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"437.92288"	"1311.75409"	"1311.75604"	"-1.48"	"-0.00065"	"9/56"	"9"	"56"	"6968059.05828857"	"HCD"	"MS2"	"39.33426"	"318.6"	"100.000"	"55.5888"	"17627"	"17627"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"545.8"	""	"510.8"	""	"470.9"	""	"426.6"	""	"553.2"	"509.8"	""	"606"	"23"	"34.000"	"27.000"	"0.135969853149739"	"21"	"0.002711"	"0.02894"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"656.38074"	"1311.75420"	"1311.75604"	"-1.40"	"-0.00092"	"6/56"	"6"	"56"	"3875799.21588135"	"HCD"	"MS2"	"13.82954"	"310.1"	"100.000"	"56.3586"	"17935"	"17935"	"17923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"476.3"	""	"451.4"	""	"441.9"	""	"399.3"	""	"606.6"	"565.3"	""	"606"	"33"	"34.000"	"27.000"	"0.0144358589002041"	"21"	"0.002525"	"0.02461"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"656.38074"	"1311.75420"	"1311.75604"	"-1.40"	"-0.00092"	"6/56"	"6"	"56"	"25344594.5273438"	"HCD"	"MS2"	"0"	"915.5"	"45.537"	"55.7859"	"17706"	"17706"	"17694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1592.2"	""	"1448.3"	""	"1313.6"	""	"1183.4"	""	"1662.2"	"1460.2"	""	"606"	"34"	"34.000"	"27.000"	"0.0123720774058806"	"21"	"0.003568"	"0.03931"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"656.38074"	"1311.75420"	"1311.75604"	"-1.40"	"-0.00092"	"6/56"	"6"	"56"	"10087244.1898193"	"HCD"	"MS2"	"0"	"828.5"	"100.000"	"56.4380"	"17933"	"17933"	"17919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1317.8"	""	"1275.2"	""	"1220.1"	""	"1071.0"	""	"1558.8"	"1400.9"	""	"606"	"34"	"34.000"	"27.000"	"0.0134104276825876"	"21"	"0.002588"	"0.02643"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"656.38080"	"1311.75432"	"1311.75604"	"-1.31"	"-0.00086"	"6/56"	"6"	"56"	"28074397.7840576"	"HCD"	"MS2"	"0"	"695.7"	"31.933"	"56.1449"	"17817"	"17817"	"17808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1180.2"	""	"1090.6"	""	"1017.1"	""	"900.8"	""	"1274.2"	"1123.5"	""	"602"	"34"	"34.000"	"27.000"	"0.0122621463619038"	"21"	"0.003904"	"0.04234"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"656.38086"	"1311.75444"	"1311.75604"	"-1.22"	"-0.00080"	"6/56"	"6"	"56"	"3058734.62188721"	"HCD"	"MS2"	"20.45583"	"253.6"	"100.000"	"56.7267"	"18048"	"18048"	"18029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"360.1"	""	"383.7"	""	"353.6"	""	"341.3"	""	"490.6"	"477.4"	""	"604"	"33"	"34.000"	"27.000"	"0.0154172509992573"	"22"	"0.002189"	"0.02124"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"437.92303"	"1311.75455"	"1311.75604"	"-1.13"	"-0.00050"	"7/56"	"7"	"56"	"12254917.0828857"	"HCD"	"MS2"	"10.59429"	"581.4"	"100.000"	"55.6705"	"17627"	"17627"	"17608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"991.1"	""	"1003.0"	""	"855.2"	""	"772.3"	""	"975.9"	"903.8"	""	"604"	"21"	"34.000"	"27.000"	"0.24044012382603"	"19"	"0.004959"	"0.0618"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIYDDSK"	"[R].iIYDDSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.38092"	"1311.75456"	"1311.75604"	"-1.12"	"-0.00074"	"6/52"	"6"	"52"	"623953.16229248"	"HCD"	"MS2"	"34.60548"	"61.0"	"100.000"	"62.6596"	"20493"	"20493"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.5"	""	"87.1"	""	"78.7"	""	"96.4"	"0.0"	"107.9"	"112.0"	""	"604"	"22"	"34.000"	"27.000"	"0.196791775006375"	"14"	"0.001615"	"0.01428"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"437.92310"	"1311.75473"	"1311.75604"	"-0.99"	"-0.00043"	"7/56"	"7"	"56"	"3744675.22363281"	"HCD"	"MS2"	"56.79544"	"181.0"	"100.000"	"55.8937"	"17748"	"17748"	"17731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.0"	""	"277.6"	""	"270.2"	""	"235.1"	""	"342.2"	"317.9"	""	"604"	"25"	"34.000"	"27.000"	"0.104233409279429"	"22"	"0.001348"	"0.0111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIYDDSK"	"[R].iIYDDSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"656.38104"	"1311.75481"	"1311.75604"	"-0.94"	"-0.00062"	"6/52"	"6"	"52"	"516885.036865234"	"HCD"	"MS2"	"15.53809"	"53.5"	"100.000"	"63.2749"	"20742"	"20742"	"20718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.4"	""	"69.4"	""	"81.7"	""	"87.6"	""	"98.2"	"97.3"	""	"604"	"20"	"34.000"	"27.000"	"0.286422375916871"	"15"	"0.001951"	"0.01648"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"656.38116"	"1311.75505"	"1311.75604"	"-0.75"	"-0.00049"	"12/56"	"12"	"56"	"39402976.635498"	"HCD"	"MS2"	"0"	"1164.5"	"39.008"	"55.8746"	"17710"	"17710"	"17701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1978.6"	""	"1855.9"	""	"1699.2"	""	"1518.0"	"6.7"	"2053.0"	"1903.2"	""	"604"	"37"	"34.000"	"27.000"	"0.00591571091398809"	"24"	"0.004392"	"0.05196"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"656.38123"	"1311.75517"	"1311.75604"	"-0.66"	"-0.00043"	"6/56"	"6"	"56"	"43544720.3815918"	"HCD"	"MS2"	"0"	"898.5"	"26.646"	"55.4996"	"17592"	"17592"	"17583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1582.3"	""	"1461.1"	""	"1340.0"	""	"1126.5"	""	"1545.7"	"1448.1"	""	"604"	"32"	"34.000"	"27.000"	"0.0171004265289553"	"24"	"0.004959"	"0.06282"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIYDDSK"	"[R].iIYDDSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"656.38135"	"1311.75542"	"1311.75604"	"-0.47"	"-0.00031"	"5/52"	"5"	"52"	"2048381.22875977"	"HCD"	"MS2"	"5.563504"	"162.2"	"100.000"	"63.0735"	"20628"	"20628"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.9"	""	"223.3"	""	"237.2"	""	"245.4"	""	"270.8"	"306.1"	""	"572"	"33"	"34.000"	"27.000"	"0.0138473297129052"	"17"	"0.001488"	"0.01217"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"437.92334"	"1311.75547"	"1311.75604"	"-0.44"	"-0.00019"	"7/56"	"7"	"56"	"3499267.6675415"	"HCD"	"MS2"	"60.35607"	"169.5"	"100.000"	"56.3120"	"17882"	"17882"	"17870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"285.0"	""	"249.2"	""	"241.4"	""	"228.2"	"0.3"	"307.3"	"292.4"	""	"558"	"23"	"34.000"	"27.000"	"0.148458204335436"	"22"	"0.001453"	"0.01185"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"656.38141"	"1311.75554"	"1311.75604"	"-0.38"	"-0.00025"	"6/56"	"6"	"56"	"689235.259765625"	"HCD"	"MS2"	"10.87999"	"70.4"	"100.000"	"53.1544"	"16635"	"16635"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.8"	""	"120.1"	""	"111.0"	""	"96.4"	"1.1"	"97.3"	"108.8"	""	"558"	"13"	"34.000"	"27.000"	"1.44080167026908"	"16"	"0.002328"	"0.02197"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIYDDSK"	"[R].iIYDDSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"656.38153"	"1311.75578"	"1311.75604"	"-0.19"	"-0.00013"	"5/52"	"5"	"52"	"926814.437194824"	"HCD"	"MS2"	"17.86075"	"82.0"	"100.000"	"62.7766"	"20507"	"20507"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.6"	""	"106.8"	""	"115.1"	""	"114.2"	""	"147.1"	"156.0"	""	"558"	"33"	"34.000"	"27.000"	"0.0149143456271755"	"20"	"0.0001991"	"0.005798"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIYDDSK"	"[R].iIYDDSk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"656.38159"	"1311.75591"	"1311.75604"	"-0.10"	"-0.00007"	"5/52"	"5"	"52"	"2161878.12591553"	"HCD"	"MS2"	"4.688684"	"178.5"	"100.000"	"62.9568"	"20613"	"20613"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.7"	""	"213.8"	""	"244.4"	""	"295.6"	""	"316.2"	"325.2"	""	"558"	"33"	"34.000"	"27.000"	"0.013446343553741"	"17"	"0.0009352"	"0.007956"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"656.38165"	"1311.75603"	"1311.75604"	"-0.01"	"0.00000"	"6/56"	"6"	"56"	"18477412.4431152"	"HCD"	"MS2"	"0"	"1424.6"	"100.000"	"55.2174"	"17476"	"17476"	"17458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2553.1"	""	"2410.0"	""	"2003.5"	""	"1898.0"	""	"2391.0"	"2211.9"	""	"558"	"34"	"34.000"	"27.000"	"0.0114975207828155"	"21"	"0.002588"	"0.02636"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"656.38171"	"1311.75615"	"1311.75604"	"0.09"	"0.00006"	"6/56"	"6"	"56"	"681648.29309082"	"HCD"	"MS2"	"0"	"64.9"	"100.000"	"53.4143"	"16707"	"16707"	"16682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.9"	""	"122.6"	""	"94.7"	""	"96.7"	""	"98.5"	"101.4"	""	"556"	"13"	"34.000"	"27.000"	"1.29432933999382"	"19"	"0.002286"	"0.02167"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEATLEK"	"[K].yEATLEk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"656.38208"	"1311.75688"	"1311.75604"	"0.64"	"0.00042"	"6/56"	"6"	"56"	"21156621.163208"	"HCD"	"MS2"	"0"	"1731.1"	"100.000"	"55.5900"	"17594"	"17594"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3152.6"	""	"2887.7"	""	"2454.8"	""	"2287.5"	""	"2965.7"	"2622.7"	""	"557"	"34"	"34.000"	"27.000"	"0.0122694529486575"	"21"	"0.003904"	"0.04229"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVTYTK"	"[R].eIVTYTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"656.40009"	"1311.79289"	"1311.79242"	"0.36"	"0.00023"	"6/58"	"6"	"58"	"1438326.30731201"	"HCD"	"MS2"	"57.20748"	"121.4"	"100.000"	"60.2532"	"19484"	"19484"	"19464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.6"	""	"141.5"	""	"157.0"	""	"170.3"	""	"305.1"	"248.1"	""	"372"	"34"	"32.000"	"25.000"	"0.00830831481400792"	"21"	"0.001615"	"0.01445"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVTYTK"	"[R].eIVTYTk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"656.40021"	"1311.79314"	"1311.79242"	"0.54"	"0.00036"	"6/58"	"6"	"58"	"1361040.39398193"	"HCD"	"MS2"	"49.12883"	"116.4"	"100.000"	"60.0940"	"19453"	"19453"	"19429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.5"	""	"138.2"	""	"152.0"	""	"150.0"	""	"307.8"	"229.7"	""	"372"	"34"	"32.000"	"25.000"	"0.00804475725725117"	"21"	"0.0005161"	"0.006566"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLPQGVK"	"[R].dPLPQGVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"656.40460"	"1311.80193"	"1311.80366"	"-1.32"	"-0.00087"	"7/62"	"7"	"62"	"1212394.36920166"	"HCD"	"MS2"	"53.51816"	"102.1"	"100.000"	"60.3794"	"19569"	"19569"	"19552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.2"	""	"99.2"	""	"114.8"	""	"146.5"	""	"310.8"	"210.0"	""	"309"	"24"	"31.000"	"24.000"	"0.0550717001143547"	"21"	"0.003357"	"0.03738"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEHLEK"	"[K].vVEHLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"437.93884"	"1311.80198"	"1311.80366"	"-1.28"	"-0.00056"	"9/54"	"9"	"54"	"7140672.2130127"	"HCD"	"MS2"	"20.23878"	"334.1"	"100.000"	"41.8093"	"11992"	"11992"	"11970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"558.2"	""	"458.1"	""	"504.7"	""	"511.4"	""	"571.7"	"562.8"	""	"309"	"31"	"31.000"	"24.000"	"0.0135808978850372"	""	"0.0001991"	"0.003664"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEHLEK"	"[K].vVEHLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"3"	"3"	"0.6341"	"0.0000"	"1"	"1"	"1"	"437.93896"	"1311.80234"	"1311.80366"	"-1.00"	"-0.00044"	"6/54"	"6"	"54"	"8045468.84173584"	"HCD"	"MS2"	"15.60609"	"374.4"	"100.000"	"41.7240"	"11991"	"11991"	"11971"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"621.3"	""	"530.1"	""	"572.0"	""	"556.0"	""	"631.9"	"633.3"	""	"309"	"41"	"31.000"	"24.000"	"0.00125293483438419"	""	"0.0001686"	"0.001108"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPLPQGVK"	"[R].dPLPQGVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"Q920Q0"	"Paralemmin-1 OS=Rattus norvegicus OX=10116 GN=Palm PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"656.40588"	"1311.80449"	"1311.80366"	"0.64"	"0.00042"	"12/62"	"12"	"62"	"1059553.19433594"	"HCD"	"MS2"	"54.88544"	"95.3"	"100.000"	"60.5615"	"19610"	"19610"	"19588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.4"	""	"83.8"	""	"109.4"	""	"141.7"	"0.4"	"278.0"	"203.9"	""	"315"	"27"	"31.000"	"24.000"	"0.0327552228218832"	"19"	"0.002588"	"0.02641"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTDYLSR"	"[R].tDLTDYLSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"656.85217"	"1312.69707"	"1312.69461"	"1.87"	"0.00123"	"7/78"	"7"	"78"	"663740.270751953"	"HCD"	"MS2"	"25.43412"	"40.3"	"100.000"	"91.5100"	"32166"	"32166"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"47.4"	""	"48.3"	""	"79.5"	"0.6"	"74.6"	"81.0"	""	"614"	"25"	"34.000"	"27.000"	"0.100957450678927"	"16"	"9.9E-05"	"0.0007817"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLTDYLSR"	"[R].tDLTDYLSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"656.85217"	"1312.69707"	"1312.69461"	"1.87"	"0.00123"	"7/78"	"7"	"78"	"801821.983398438"	"HCD"	"MS2"	"11.875"	"51.3"	"100.000"	"91.6100"	"32170"	"32170"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"67.8"	""	"67.8"	""	"89.9"	""	"92.2"	"107.6"	""	"614"	"40"	"34.000"	"27.000"	"0.00331236643724557"	"21"	"0"	"9.298E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTGSYIANR"	"[R].tTTGSYIANR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"656.85547"	"1312.70366"	"1312.70585"	"-1.66"	"-0.00109"	"8/82"	"8"	"82"	"1365714.8347168"	"HCD"	"MS2"	"0"	"75.5"	"100.000"	"32.6283"	"8311"	"8311"	"8283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.6"	""	"88.8"	""	"115.3"	""	"110.8"	"1.7"	"136.5"	"149.9"	""	"609"	"58"	"34.000"	"27.000"	"5.10020105750051E-05"	"18"	"0"	"3.662E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTGSYIANR"	"[R].tTTGSYIANR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"656.85596"	"1312.70464"	"1312.70585"	"-0.92"	"-0.00060"	"8/82"	"8"	"82"	"1823984.43078613"	"HCD"	"MS2"	"8.108893"	"104.3"	"100.000"	"32.7569"	"8326"	"8326"	"8298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.0"	""	"119.7"	""	"156.6"	""	"159.5"	""	"187.7"	"195.5"	""	"605"	"55"	"34.000"	"27.000"	"9.30519286459064E-05"	"21"	"0"	"4.07E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMDVYQK"	"[K].aMDVYQk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"656.87012"	"1312.73296"	"1312.73353"	"-0.44"	"-0.00029"	"12/50"	"12"	"50"	"888708.16192627"	"HCD"	"MS2"	"33.59904"	"82.5"	"100.000"	"55.0014"	"17354"	"17354"	"17335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.8"	""	"105.1"	""	"118.2"	""	"106.2"	""	"151.6"	"155.3"	""	"567"	"33"	"34.000"	"27.000"	"0.0153303850555072"	"26"	"0.0005161"	"0.006684"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPEGSPVSR"	"[K].vGVPEGSPVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"656.87286"	"1312.73845"	"1312.74223"	"-2.88"	"-0.00189"	"7/90"	"7"	"90"	"861478.61114502"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"47.1540"	"14161"	"14161"	"14142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.7"	""	"57.1"	""	"65.3"	""	"71.8"	"1.0"	"91.3"	"78.3"	""	"562"	"43"	"34.000"	"27.000"	"0.00145782810939038"	"23"	"0.0001991"	"0.004806"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPEGSPVSR"	"[K].vGVPEGSPVSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"Q9R189"	"Protein unc-13 homolog D OS=Rattus norvegicus OX=10116 GN=Unc13d PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"656.87482"	"1312.74236"	"1312.74223"	"0.10"	"0.00006"	"7/90"	"7"	"90"	"636496.376037598"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"46.7744"	"14045"	"14045"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"48.5"	""	"49.4"	""	"60.8"	""	"65.5"	"70.4"	""	"553"	"39"	"34.000"	"27.000"	"0.00340169315129623"	"19"	"0.0001991"	"0.00205"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPGVDALSNV"	"[K].vLPGVDALSNV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"656.88666"	"1312.76604"	"1312.76738"	"-1.02"	"-0.00067"	"10/86"	"10"	"86"	"2316349.38153076"	"HCD"	"MS2"	"8.775135"	"19.0"	"100.000"	"113.7990"	"41057"	"41057"	"41039"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"23.8"	""	"29.0"	""	"30.3"	""	"32.1"	"35.6"	""	"526"	"48"	"34.000"	"27.000"	"0.000432469763205527"	"19"	"0"	"8.906E-06"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLPGVDALSNV"	"[K].vLPGVDALSNV.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"656.88708"	"1312.76689"	"1312.76738"	"-0.37"	"-0.00024"	"7/86"	"7"	"86"	"3215180.73309326"	"HCD"	"MS2"	"9.444581"	"26.4"	"100.000"	"113.7345"	"41018"	"41018"	"41001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.3"	""	"39.2"	""	"36.2"	""	"38.2"	""	"47.8"	"43.2"	""	"522"	"60"	"34.000"	"27.000"	"2.52720520484186E-05"	"21"	"0"	"3.6E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEVSPNLVR"	"[R].lGEVSPNLVR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.89233"	"1312.77739"	"1312.77862"	"-0.93"	"-0.00061"	"14/82"	"14"	"82"	"951398.803527832"	"HCD"	"MS2"	"43.24667"	"81.2"	"100.000"	"77.5170"	"26512"	"26512"	"26497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.5"	""	"126.5"	""	"134.3"	""	"103.8"	""	"135.7"	"147.8"	""	"474"	"18"	"33.000"	"26.000"	"0.384368993074066"	"14"	"0.0001991"	"0.002749"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTEELPLR"	"[K].lLTEELPLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"656.90503"	"1312.80278"	"1312.80377"	"-0.75"	"-0.00049"	"10/68"	"10"	"68"	"164309.445739746"	"HCD"	"MS2"	"22.56909"	"8.4"	"100.000"	"107.2971"	"38488"	"38488"	"38470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"7.2"	""	"10.7"	""	"11.8"	""	"16.0"	"23.8"	""	"350"	"29"	"32.000"	"25.000"	"0.0218292114992515"	"24"	"0.00212"	"0.01939"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTEELPLR"	"[K].lLTEELPLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"P11530"	"Dystrophin OS=Rattus norvegicus OX=10116 GN=Dmd PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"656.90533"	"1312.80339"	"1312.80377"	"-0.29"	"-0.00019"	"5/68"	"5"	"68"	"170120.053710938"	"HCD"	"MS2"	"24.68659"	"9.6"	"100.000"	"107.5830"	"38618"	"38618"	"38599"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.6"	""	"11.5"	""	"13.4"	""	"14.2"	""	"14.4"	"29.6"	""	"349"	"15"	"32.000"	"25.000"	"0.595381630780266"	"17"	"0.008255"	"0.105"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLQNEYR"	"[K].vYLQNEYR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"657.35626"	"1313.70525"	"1313.70512"	"0.10"	"0.00007"	"6/64"	"6"	"64"	"629146.217224121"	"HCD"	"MS2"	"23.99404"	"47.9"	"100.000"	"53.9966"	"16978"	"16978"	"16958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.7"	""	"51.8"	""	"62.6"	""	"80.0"	""	"80.6"	"109.6"	""	"649"	"31"	"35.000"	"28.000"	"0.0281977659303405"	"15"	"0.0001991"	"0.003324"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYLQNEYR"	"[K].vYLQNEYR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.35687"	"1313.70647"	"1313.70512"	"1.03"	"0.00068"	"6/64"	"6"	"64"	"452800.635986328"	"HCD"	"MS2"	"56.97158"	"36.9"	"100.000"	"54.2520"	"17049"	"17049"	"17021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"44.3"	""	"45.0"	""	"69.4"	""	"60.9"	"81.5"	""	"650"	"28"	"35.000"	"28.000"	"0.0527088281641653"	"15"	"0.001615"	"0.01387"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLINNINR"	"[R].eVLINNINR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"657.38672"	"1313.76616"	"1313.77387"	"-5.86"	"-0.00385"	"6/72"	"6"	"72"	"349738.235290527"	"HCD"	"MS2"	"38.19601"	"27.2"	"100.000"	"61.7699"	"20099"	"20099"	"20068"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"30.3"	""	"29.3"	""	"43.5"	""	"57.9"	"66.0"	""	"511"	"24"	"34.000"	"27.000"	"0.101482440889442"	"15"	"0.001615"	"0.01322"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLINNINR"	"[R].eVLINNINR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"657.39081"	"1313.77434"	"1313.77387"	"0.36"	"0.00024"	"6/72"	"6"	"72"	"215338.31628418"	"HCD"	"MS2"	"21.20558"	"18.1"	"100.000"	"62.0721"	"20254"	"20254"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"22.7"	""	"17.6"	""	"34.1"	""	"39.6"	"39.6"	""	"511"	"24"	"34.000"	"27.000"	"0.0931946334394928"	"23"	"0.0001991"	"0.003836"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLINNINR"	"[R].eVLINNINR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"657.39105"	"1313.77483"	"1313.77387"	"0.73"	"0.00048"	"5/72"	"5"	"72"	"287375.398986816"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"62.0760"	"20222"	"20222"	"20199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"25.4"	""	"29.3"	""	"42.6"	""	"50.2"	"45.7"	""	"511"	"28"	"34.000"	"27.000"	"0.043490149889491"	""	"0.001261"	"0.01024"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLINNINR"	"[R].eVLINNINR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"657.39111"	"1313.77495"	"1313.77387"	"0.83"	"0.00054"	"6/72"	"6"	"72"	"369735.294677734"	"HCD"	"MS2"	"57.09293"	"25.8"	"100.000"	"61.7333"	"20117"	"20117"	"20086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.1"	""	"26.7"	""	"33.9"	""	"42.4"	""	"54.1"	"54.2"	""	"513"	"24"	"34.000"	"27.000"	"0.0914297157238316"	"21"	"0.0001991"	"0.004241"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"657.39404"	"1313.78081"	"1313.78292"	"-1.61"	"-0.00106"	"6/72"	"6"	"72"	"396123.136962891"	"HCD"	"MS2"	"27.44899"	"28.9"	"100.000"	"34.4605"	"9055"	"9055"	"9030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"36.4"	""	"32.0"	""	"55.4"	""	"58.3"	"53.9"	""	"439"	"16"	"33.000"	"26.000"	"0.528974241596707"	"25"	"0.00329"	"0.03501"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"657.39429"	"1313.78130"	"1313.78292"	"-1.24"	"-0.00081"	"5/72"	"5"	"72"	"645426.936645508"	"HCD"	"MS2"	"0"	"51.1"	"100.000"	"33.9881"	"8828"	"8828"	"8802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.7"	""	"56.4"	""	"62.1"	""	"97.3"	""	"109.8"	"102.3"	""	"438"	"10"	"33.000"	"26.000"	"2.38475690440022"	"21"	"0.009635"	"0.1283"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"657.39447"	"1313.78166"	"1313.78292"	"-0.96"	"-0.00063"	"6/72"	"6"	"72"	"345001.114257813"	"HCD"	"MS2"	"44.4502"	"25.0"	"100.000"	"33.0948"	"8464"	"8464"	"8434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.5"	""	"26.2"	""	"30.6"	""	"50.1"	"0.6"	"57.2"	"44.1"	""	"438"	"24"	"33.000"	"26.000"	"0.0932060524762897"	""	"0.001261"	"0.009939"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"657.39478"	"1313.78227"	"1313.78292"	"-0.49"	"-0.00032"	"5/72"	"5"	"72"	"986595.327758789"	"HCD"	"MS2"	"35.01677"	"73.2"	"100.000"	"33.8591"	"8813"	"8813"	"8793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	""	"84.1"	""	"98.5"	""	"140.5"	"0.1"	"142.5"	"139.8"	""	"438"	"19"	"33.000"	"26.000"	"0.278897174742649"	"20"	"0.003818"	"0.04114"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"657.39478"	"1313.78227"	"1313.78292"	"-0.49"	"-0.00032"	"5/72"	"5"	"72"	"733793.505859375"	"HCD"	"MS2"	"0"	"57.0"	"100.000"	"33.1034"	"8505"	"8505"	"8478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.2"	""	"75.3"	""	"65.4"	""	"89.0"	"1.7"	"111.0"	"100.6"	""	"438"	"10"	"33.000"	"26.000"	"2.4123710878957"	"18"	"0.006845"	"0.08558"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"657.39520"	"1313.78313"	"1313.78292"	"0.16"	"0.00010"	"9/72"	"9"	"72"	"423414.34588623"	"HCD"	"MS2"	"36.02606"	"31.7"	"100.000"	"34.3047"	"8956"	"8956"	"8929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.5"	""	"39.2"	""	"40.6"	""	"59.7"	"1.4"	"60.9"	"56.2"	""	"421"	"15"	"33.000"	"26.000"	"0.665659447465443"	"19"	"0.004158"	"0.045"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"657.39539"	"1313.78349"	"1313.78292"	"0.44"	"0.00029"	"6/72"	"6"	"72"	"549609.850891113"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"33.6529"	"8691"	"8691"	"8664"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"43.2"	""	"44.6"	""	"72.7"	""	"73.0"	"66.7"	""	"423"	"18"	"33.000"	"26.000"	"0.32085615271765"	""	"0.00296"	"0.03154"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVPPQEK"	"[R].sAVPPQEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"657.39557"	"1313.78386"	"1313.78292"	"0.71"	"0.00047"	"9/72"	"9"	"72"	"508634.618896484"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"33.5653"	"8693"	"8693"	"8665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"32.6"	""	"40.9"	""	"63.7"	""	"76.2"	"66.4"	""	"416"	"14"	"33.000"	"26.000"	"0.774574749009502"	"23"	"0.004959"	"0.06129"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"657.40216"	"1313.79704"	"1313.79902"	"-1.50"	"-0.00099"	"9/84"	"9"	"84"	"1877452.35772705"	"HCD"	"MS2"	"0"	"74.9"	"100.000"	"80.6745"	"27796"	"27796"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.4"	""	"127.2"	""	"126.5"	""	"111.7"	"0.6"	"125.8"	"101.0"	""	"450"	"42"	"33.000"	"26.000"	"0.00132489822455007"	"25"	"0.0001686"	"0.001396"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"657.40240"	"1313.79753"	"1313.79902"	"-1.13"	"-0.00074"	"5/84"	"5"	"84"	"396592.49420166"	"HCD"	"MS2"	"23.81229"	"26.5"	"100.000"	"80.9765"	"27918"	"27918"	"27900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.2"	""	"31.1"	""	"44.3"	""	"45.8"	"1.9"	"48.6"	"46.1"	""	"450"	"29"	"33.000"	"26.000"	"0.0286538193228749"	"20"	"0.001615"	"0.01396"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"657.40265"	"1313.79802"	"1313.79902"	"-0.76"	"-0.00050"	"7/84"	"7"	"84"	"2240066.89282227"	"HCD"	"MS2"	"1.343734"	"90.2"	"100.000"	"80.4904"	"27693"	"27693"	"27673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.9"	""	"158.2"	""	"151.8"	""	"155.4"	""	"137.5"	"125.7"	""	"462"	"43"	"33.000"	"26.000"	"0.00107056238459082"	""	"0.0001686"	"0.001074"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"657.40283"	"1313.79839"	"1313.79902"	"-0.48"	"-0.00031"	"9/84"	"9"	"84"	"1620006.82550049"	"HCD"	"MS2"	"0"	"69.8"	"100.000"	"80.3749"	"27673"	"27673"	"27660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.1"	""	"100.0"	""	"130.7"	""	"124.6"	""	"108.8"	"89.5"	""	"462"	"38"	"33.000"	"26.000"	"0.00387803728186311"	"20"	"0.0001686"	"0.001397"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"657.40295"	"1313.79863"	"1313.79902"	"-0.29"	"-0.00019"	"7/84"	"7"	"84"	"753071.142211914"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"80.7921"	"27816"	"27816"	"27798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"56.2"	""	"63.5"	""	"61.8"	"0.1"	"57.0"	"64.0"	""	"461"	"42"	"33.000"	"26.000"	"0.00130217972694236"	"21"	"0.0001991"	"0.002852"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"657.40314"	"1313.79900"	"1313.79902"	"-0.01"	"-0.00001"	"7/84"	"7"	"84"	"933581.532348633"	"HCD"	"MS2"	"6.284503"	"45.3"	"100.000"	"80.1957"	"27574"	"27574"	"27556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.1"	""	"71.3"	""	"74.3"	""	"73.0"	""	"74.1"	"69.6"	""	"459"	"43"	"33.000"	"26.000"	"0.00124675951077514"	"20"	"0.0001991"	"0.003192"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITPAVVSER"	"[K].lITPAVVSER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"P62853"	"40S ribosomal protein S25 OS=Rattus norvegicus OX=10116 GN=Rps25 PE=2 SV=1"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"438.60492"	"1313.80021"	"1313.79902"	"0.90"	"0.00040"	"10/84"	"10"	"84"	"219707.151672363"	"HCD"	"MS2"	"7.48947"	"8.3"	"100.000"	"80.5108"	"27702"	"27702"	"27673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"9.1"	""	"13.8"	""	"12.4"	"2.4"	"15.6"	"14.7"	""	"446"	"33"	"33.000"	"26.000"	"0.0119207852145525"	"20"	"0.0001991"	"0.00528"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQIYDVYR"	"[K].eQIYDVYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"657.84778"	"1314.68828"	"1314.68913"	"-0.65"	"-0.00043"	"7/76"	"7"	"76"	"764384.449279785"	"HCD"	"MS2"	"0"	"47.0"	"100.000"	"63.7775"	"20915"	"20915"	"20894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"49.0"	""	"48.8"	""	"81.3"	"0.4"	"104.1"	"101.4"	""	"635"	"34"	"35.000"	"28.000"	"0.0140521808225134"	"20"	"0.0001686"	"0.001364"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYDNPK"	"[K].gYYDNPk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"657.85907"	"1314.71086"	"1314.70942"	"1.10"	"0.00072"	"5/52"	"5"	"52"	"2250034.00170898"	"HCD"	"MS2"	"0"	"213.9"	"100.000"	"41.1769"	"11773"	"11773"	"11750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"375.8"	""	"299.9"	""	"285.2"	""	"251.1"	"3.9"	"408.0"	"402.0"	""	"651"	"12"	"35.000"	"28.000"	"2.00240072067062"	"21"	"0.006925"	"0.08686"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYYDNPK"	"[K].gYYDNPk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"Q5FVQ4"	"Malectin OS=Rattus norvegicus OX=10116 GN=Mlec PE=2 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"657.85925"	"1314.71123"	"1314.70942"	"1.37"	"0.00090"	"6/52"	"6"	"52"	"2154397.39581299"	"HCD"	"MS2"	"0"	"194.9"	"100.000"	"41.2867"	"11780"	"11780"	"11758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"343.5"	""	"264.4"	""	"265.9"	""	"242.1"	"2.5"	"349.9"	"376.8"	""	"651"	"20"	"35.000"	"28.000"	"0.299606335605658"	"20"	"0.0042"	"0.04528"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNASEPK"	"[K].nPNASEPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"657.87439"	"1314.74150"	"1314.74179"	"-0.22"	"-0.00014"	"7/72"	"7"	"72"	"2552115.04180908"	"HCD"	"MS2"	"0"	"162.1"	"100.000"	"25.6557"	"5533"	"5533"	"5502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.8"	""	"198.1"	""	"186.8"	""	"280.3"	""	"350.0"	"340.8"	""	"596"	"38"	"34.000"	"27.000"	"0.00490022773518049"	"19"	"0.0001686"	"0.001356"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPNASEPK"	"[K].nPNASEPk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"657.87494"	"1314.74260"	"1314.74179"	"0.62"	"0.00041"	"7/72"	"7"	"72"	"2662577.95507813"	"HCD"	"MS2"	"0"	"160.2"	"100.000"	"25.8439"	"5570"	"5570"	"5542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.4"	"2.6"	"192.1"	""	"190.1"	""	"282.1"	""	"333.8"	"326.1"	""	"593"	"38"	"34.000"	"27.000"	"0.00480866693866923"	"19"	"9.9E-05"	"0.0009291"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSTNLALPE"	"[R].lQSTNLALPE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"B0K019"	"BAG family molecular chaperone regulator 1 OS=Rattus norvegicus OX=10116 GN=Bag1 PE=2 SV=1"	"B0K019"	"BAG family molecular chaperone regulator 1 OS=Rattus norvegicus OX=10116 GN=Bag1 PE=2 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"657.87622"	"1314.74516"	"1314.74665"	"-1.13"	"-0.00074"	"7/92"	"7"	"92"	"226933.222900391"	"HCD"	"MS2"	"22.06321"	"8.6"	"100.000"	"105.3310"	"37709"	"37709"	"37690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"8.5"	""	"10.3"	""	"17.2"	""	"18.1"	"18.8"	""	"629"	"42"	"34.000"	"27.000"	"0.00222648949188812"	""	"0"	"6.285E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSTNLALPE"	"[R].lQSTNLALPE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"B0K019"	"BAG family molecular chaperone regulator 1 OS=Rattus norvegicus OX=10116 GN=Bag1 PE=2 SV=1"	"B0K019"	"BAG family molecular chaperone regulator 1 OS=Rattus norvegicus OX=10116 GN=Bag1 PE=2 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"657.87622"	"1314.74516"	"1314.74665"	"-1.13"	"-0.00074"	"6/92"	"6"	"92"	"231439.535888672"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"105.5832"	"37828"	"37828"	"37806"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.1"	""	"10.6"	""	"12.9"	""	"12.9"	""	"14.7"	"18.7"	""	"629"	"48"	"34.000"	"27.000"	"0.000559268874457242"	"26"	"0"	"0.0001101"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPHLPSHR"	"[K].iEPHLPSHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"438.92047"	"1314.74686"	"1314.74798"	"-0.86"	"-0.00037"	"8/74"	"8"	"74"	"4113860.1862793"	"HCD"	"MS2"	"18.20227"	"139.7"	"100.000"	"31.2783"	"7729"	"7729"	"7706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.1"	""	"171.1"	""	"164.9"	""	"252.1"	"3.8"	"280.9"	"283.4"	""	"625"	"24"	"34.000"	"27.000"	"0.122701542312375"	"20"	"0.0001991"	"0.003762"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDPHVK"	"[K].fNDPHVk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"438.92316"	"1314.75492"	"1314.75704"	"-1.62"	"-0.00071"	"7/58"	"7"	"58"	"2470765.49395752"	"HCD"	"MS2"	"17.5982"	"142.4"	"100.000"	"40.6548"	"11527"	"11527"	"11508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.7"	""	"161.8"	""	"142.1"	""	"247.2"	"0.9"	"303.9"	"315.3"	""	"606"	"22"	"34.000"	"27.000"	"0.184689679863771"	"20"	"0.007069"	"0.0895"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDLVLDR"	"[K].eIIDLVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"657.89490"	"1314.78252"	"1314.78303"	"-0.39"	"-0.00026"	"7/78"	"7"	"78"	"4678150.76489258"	"HCD"	"MS2"	"0"	"188.0"	"100.000"	"113.3477"	"40860"	"40860"	"40841"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.2"	""	"238.0"	""	"260.3"	""	"316.5"	"0.6"	"338.4"	"356.4"	""	"594"	"47"	"34.000"	"27.000"	"0.000593958975280925"	"26"	"0"	"0.0001569"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIIDLVLDR"	"[K].eIIDLVLDR.[I]"	"N-Term(TMT6plex)"	"1"	"3"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"657.89508"	"1314.78288"	"1314.78303"	"-0.11"	"-0.00007"	"6/78"	"6"	"78"	"3920197.06500244"	"HCD"	"MS2"	"9.982257"	"152.8"	"100.000"	"113.4240"	"40905"	"40905"	"40879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"224.2"	""	"200.4"	""	"213.1"	""	"256.2"	""	"274.8"	"279.6"	""	"594"	"50"	"34.000"	"27.000"	"0.0003271571749338"	"27"	"0"	"9.363E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAVNPTVK"	"[K].aGAVNPTVk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"657.91058"	"1314.81389"	"1314.81456"	"-0.51"	"-0.00033"	"14/72"	"14"	"72"	"1736727.38366699"	"HCD"	"MS2"	"3.943911"	"123.1"	"100.000"	"42.0280"	"12081"	"12081"	"12060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.3"	""	"138.9"	""	"115.8"	""	"230.1"	"0.1"	"268.3"	"292.3"	""	"488"	"41"	"33.000"	"26.000"	"0.0020767768132138"	"26"	"0"	"0.0001111"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAVNPTVK"	"[K].aGAVNPTVk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"657.91107"	"1314.81487"	"1314.81456"	"0.24"	"0.00016"	"7/72"	"7"	"72"	"1269857.94500732"	"HCD"	"MS2"	"5.668608"	"102.6"	"100.000"	"41.9219"	"12072"	"12072"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.4"	""	"113.5"	""	"104.2"	""	"182.5"	"0.1"	"221.8"	"255.2"	""	"479"	"47"	"33.000"	"26.000"	"0.000502696102127834"	""	"0"	"5.412E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVAQPAENR"	"[R].aMVAQPAENR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"658.35333"	"1315.69939"	"1315.69899"	"0.31"	"0.00020"	"9/82"	"9"	"82"	"602415.805175781"	"HCD"	"MS2"	"28.21491"	"41.6"	"100.000"	"31.8207"	"7950"	"7950"	"7921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.9"	""	"54.0"	""	"65.1"	""	"51.0"	""	"75.1"	"80.6"	""	"713"	"24"	"35.000"	"28.000"	"0.132147677315488"	"18"	"0.001348"	"0.01097"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMVAQPAENR"	"[R].aMVAQPAENR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"658.35376"	"1315.70024"	"1315.69899"	"0.96"	"0.00063"	"7/82"	"7"	"82"	"513256.896057129"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"31.6505"	"7918"	"7918"	"7888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.2"	""	"49.2"	""	"44.5"	""	"36.9"	""	"72.9"	"57.2"	""	"701"	"29"	"35.000"	"28.000"	"0.043519913381114"	"18"	"0.0001991"	"0.001979"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"658.36401"	"1315.72075"	"1315.72077"	"-0.01"	"-0.00001"	"13/74"	"13"	"74"	"1101524.61187744"	"HCD"	"MS2"	"6.81448"	"48.7"	"100.000"	"89.4770"	"31349"	"31349"	"31338"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"69.6"	""	"69.1"	""	"69.5"	""	"88.9"	"107.5"	""	"728"	"32"	"35.000"	"28.000"	"0.0251247288597848"	""	"0"	"0.0001542"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"658.36426"	"1315.72124"	"1315.72077"	"0.36"	"0.00024"	"6/74"	"6"	"74"	"672460.902770996"	"HCD"	"MS2"	"12.8882"	"31.9"	"100.000"	"89.6535"	"31380"	"31380"	"31368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"35.1"	""	"56.8"	""	"43.2"	"0.1"	"62.9"	"63.9"	""	"727"	"27"	"35.000"	"28.000"	"0.0768253265980621"	"22"	"0.005832"	"0.07162"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"658.36456"	"1315.72185"	"1315.72077"	"0.82"	"0.00054"	"7/74"	"7"	"74"	"1277959.88964844"	"HCD"	"MS2"	"4.176421"	"59.6"	"100.000"	"89.3347"	"31253"	"31253"	"31235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.1"	""	"83.7"	""	"83.1"	""	"74.4"	"1.1"	"118.4"	"127.7"	""	"739"	"32"	"35.000"	"28.000"	"0.0248092961156139"	"26"	"0.0001991"	"0.003563"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGVPTLWR"	"[R].eEGVPTLWR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"658.36469"	"1315.72209"	"1315.72077"	"1.01"	"0.00066"	"8/74"	"8"	"74"	"1260217.97247314"	"HCD"	"MS2"	"3.390707"	"55.8"	"100.000"	"89.2044"	"31240"	"31240"	"31228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.0"	""	"73.6"	""	"76.3"	""	"74.0"	""	"113.8"	"125.0"	""	"732"	"25"	"35.000"	"28.000"	"0.125742208931354"	"27"	"0.0001991"	"0.003687"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNMPLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"658.36560"	"1315.72392"	"1315.72414"	"-0.16"	"-0.00011"	"7/76"	"7"	"76"	"1620745.7310791"	"HCD"	"MS2"	"4.565117"	"77.9"	"100.000"	"89.0278"	"31131"	"31131"	"31119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.9"	""	"102.3"	""	"84.8"	""	"79.4"	"0.5"	"172.5"	"192.5"	""	"681"	"45"	"35.000"	"28.000"	"0.000970771720085081"	""	"0"	"0.0001634"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELDNMPLR"	"[K].vELDNMPLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"658.36652"	"1315.72576"	"1315.72414"	"1.23"	"0.00081"	"7/76"	"7"	"76"	"1485511.74859619"	"HCD"	"MS2"	"4.744332"	"73.1"	"100.000"	"88.8996"	"31118"	"31118"	"31100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.3"	""	"85.5"	""	"93.4"	""	"83.2"	""	"163.7"	"168.0"	""	"669"	"50"	"35.000"	"28.000"	"0.000336043981848123"	""	"0"	"6.53E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSMPLnGLk.[E]"	"N-Term(Prot)(Acetyl); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"658.37756"	"1315.74785"	"1315.74929"	"-1.09"	"-0.00072"	"6/78"	"6"	"78"	"554788.975769043"	"HCD"	"MS2"	"3.801212"	"21.2"	"100.000"	"113.2716"	"40829"	"40829"	"40809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"21.4"	""	"27.1"	""	"28.7"	"0.4"	"52.9"	"47.6"	""	"777"	"43"	"35.000"	"28.000"	"0.00202484145264324"	"24"	"0.0001991"	"0.002798"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSMPLnGLk.[E]"	"N-Term(Prot)(Acetyl); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.37781"	"1315.74834"	"1315.74929"	"-0.72"	"-0.00048"	"4/78"	"4"	"78"	"68220.7866210938"	"HCD"	"MS2"	"19.58725"	"6.0"	"100.000"	"114.0930"	"41177"	"41177"	"41151"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.9"	""	"3.5"	""	"7.7"	""	"8.9"	""	"14.1"	"16.5"	""	"735"	"20"	"35.000"	"28.000"	"0.352579732082106"	"14"	"0.009444"	"0.1252"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSMPLNGLK"	"[M].aLSMPLnGLk.[E]"	"N-Term(Prot)(Acetyl); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"658.37836"	"1315.74944"	"1315.74929"	"0.11"	"0.00007"	"6/78"	"6"	"78"	"469602.045288086"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"113.3406"	"40871"	"40871"	"40847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"20.0"	""	"26.5"	""	"22.8"	""	"45.6"	"44.8"	""	"727"	"35"	"35.000"	"28.000"	"0.0104834545138652"	""	"0.0001991"	"0.002643"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINDIQLSR"	"[R].qINDIQLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"658.37994"	"1315.75261"	"1315.75313"	"-0.39"	"-0.00026"	"6/88"	"6"	"88"	"550117.124694824"	"HCD"	"MS2"	"14.95858"	"36.0"	"100.000"	"57.8749"	"18551"	"18551"	"18530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.7"	""	"42.3"	""	"51.5"	""	"54.4"	"0.8"	"67.9"	"70.8"	""	"759"	"36"	"35.000"	"28.000"	"0.00857455874798861"	"27"	"0.0001686"	"0.001596"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINDIQLSR"	"[R].qINDIQLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"658.38007"	"1315.75286"	"1315.75313"	"-0.21"	"-0.00014"	"6/88"	"6"	"88"	"643811.018798828"	"HCD"	"MS2"	"23.11425"	"39.3"	"100.000"	"57.7944"	"18483"	"18483"	"18455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"38.8"	""	"51.1"	""	"67.6"	"2.2"	"74.7"	"84.8"	""	"759"	"33"	"35.000"	"28.000"	"0.0192846508451733"	"25"	"0.0001686"	"0.00114"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINDIQLSR"	"[R].qINDIQLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"658.38025"	"1315.75322"	"1315.75313"	"0.07"	"0.00005"	"7/88"	"7"	"88"	"656546.687805176"	"HCD"	"MS2"	"18.0194"	"43.7"	"100.000"	"57.5688"	"18426"	"18426"	"18403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.0"	""	"57.0"	""	"50.0"	""	"76.2"	"2.1"	"81.2"	"78.4"	""	"759"	"49"	"35.000"	"28.000"	"0.000473382043655197"	"26"	"0"	"0.0001011"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QINDIQLSR"	"[R].qINDIQLSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"B0BNA7"	"Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus OX=10116 GN=Eif3i PE=2 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"658.38043"	"1315.75359"	"1315.75313"	"0.35"	"0.00023"	"7/88"	"7"	"88"	"597992.529418945"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"58.1237"	"18617"	"18617"	"18594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"42.1"	""	"51.3"	""	"62.9"	""	"71.0"	"81.4"	""	"775"	"44"	"35.000"	"28.000"	"0.00142978819445933"	""	"9.9E-05"	"0.0005624"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"3"	"658.38416"	"1315.76103"	"1315.76219"	"-0.88"	"-0.00058"	"6/64"	"6"	"64"	"3187044.84185791"	"HCD"	"MS2"	"31.58458"	"226.0"	"100.000"	"41.4246"	"11870"	"11870"	"11846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"389.4"	""	"279.1"	""	"281.2"	""	"420.8"	""	"380.6"	"391.5"	""	"714"	"23"	"35.000"	"28.000"	"0.162430737473567"	"28"	"0.0005161"	"0.006677"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"3"	"658.38416"	"1315.76103"	"1315.76219"	"-0.88"	"-0.00058"	"10/64"	"10"	"64"	"8045524.79943848"	"HCD"	"MS2"	"0"	"562.4"	"100.000"	"41.8391"	"12004"	"12004"	"11986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"865.5"	""	"696.4"	""	"751.6"	""	"964.2"	""	"989.8"	"1067.9"	""	"714"	"28"	"35.000"	"28.000"	"0.0607670587496997"	"22"	"0.001453"	"0.01163"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"439.25854"	"1315.76108"	"1315.76219"	"-0.84"	"-0.00037"	"8/64"	"8"	"64"	"5001056.99957275"	"HCD"	"MS2"	"8.385029"	"217.5"	"100.000"	"41.5819"	"11934"	"11934"	"11910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.0"	""	"278.5"	""	"298.3"	""	"371.2"	"4.8"	"416.0"	"390.9"	""	"714"	"25"	"35.000"	"28.000"	"0.113937901427097"	"19"	"0.001596"	"0.01301"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"3"	"658.38428"	"1315.76128"	"1315.76219"	"-0.69"	"-0.00045"	"6/64"	"6"	"64"	"2716044.30303955"	"HCD"	"MS2"	"36.02045"	"191.4"	"100.000"	"41.5527"	"11888"	"11888"	"11864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.3"	""	"242.5"	""	"240.8"	""	"363.0"	""	"345.9"	"315.7"	""	"714"	"23"	"35.000"	"28.000"	"0.170870942959182"	"26"	"0.0005161"	"0.006964"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"3"	"658.38464"	"1315.76201"	"1315.76219"	"-0.13"	"-0.00009"	"10/64"	"10"	"64"	"7488328.85949707"	"HCD"	"MS2"	"3.298512"	"516.4"	"100.000"	"41.7145"	"11988"	"11988"	"11971"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"746.2"	""	"620.8"	""	"685.0"	""	"911.2"	""	"962.1"	"978.0"	""	"698"	"26"	"35.000"	"28.000"	"0.0907455687544679"	"25"	"0.001615"	"0.01406"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALEPGQK"	"[K].dALEPGQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"439.25940"	"1315.76364"	"1315.76219"	"1.11"	"0.00049"	"6/64"	"6"	"64"	"4784752.28857422"	"HCD"	"MS2"	"8.991942"	"208.2"	"100.000"	"41.7103"	"11952"	"11952"	"11922"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.2"	""	"240.2"	""	"272.3"	""	"358.7"	""	"384.7"	"389.4"	""	"757"	"38"	"35.000"	"28.000"	"0.00538351445925987"	"26"	"0.0009352"	"0.008226"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"658.39246"	"1315.77764"	"1315.77828"	"-0.49"	"-0.00032"	"8/86"	"8"	"86"	"1204122.84088135"	"HCD"	"MS2"	"27.38708"	"59.7"	"100.000"	"96.0455"	"33964"	"33964"	"33945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.4"	""	"67.3"	""	"100.1"	""	"96.2"	""	"118.8"	"105.9"	""	"741"	"36"	"35.000"	"28.000"	"0.009306539228743"	""	"0"	"0.0001672"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"658.39270"	"1315.77812"	"1315.77828"	"-0.12"	"-0.00008"	"6/86"	"6"	"86"	"241535.116027832"	"HCD"	"MS2"	"11.14085"	"18.1"	"100.000"	"96.3800"	"34131"	"34131"	"34110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.6"	""	"18.2"	""	"36.0"	""	"29.9"	""	"27.3"	"38.8"	""	"738"	"18"	"35.000"	"28.000"	"0.592961322361751"	"17"	"0.002189"	"0.02073"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDELVTLR"	"[R].lQDELVTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"658.39270"	"1315.77812"	"1315.77828"	"-0.12"	"-0.00008"	"7/86"	"7"	"86"	"1158871.31781006"	"HCD"	"MS2"	"29.5869"	"57.3"	"100.000"	"96.0774"	"34009"	"34009"	"33990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.4"	""	"73.5"	""	"88.4"	""	"95.7"	"3.3"	"105.3"	"107.5"	""	"738"	"42"	"35.000"	"28.000"	"0.00225957294546441"	""	"0"	"0.0002101"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLVPDASK"	"[R].qLVPDASk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1Z9"	"PDZ and LIM domain protein 7 OS=Rattus norvegicus OX=10116 GN=Pdlim7 PE=1 SV=1"	"Q9Z1Z9"	"PDZ and LIM domain protein 7 OS=Rattus norvegicus OX=10116 GN=Pdlim7 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"658.40186"	"1315.79643"	"1315.79857"	"-1.62"	"-0.00107"	"6/74"	"6"	"74"	"394481.188171387"	"HCD"	"MS2"	"24.32286"	"31.2"	"100.000"	"54.3256"	"17079"	"17079"	"17053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"35.2"	""	"43.4"	""	"51.1"	"0.2"	"68.7"	"58.6"	""	"583"	"31"	"34.000"	"27.000"	"0.0208755804077061"	""	"0.001103"	"0.009054"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QWLQEIDR"	"[K].qWLQEIDR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"658.86108"	"1316.71489"	"1316.71602"	"-0.85"	"-0.00056"	"5/74"	"5"	"74"	"5390170.26513672"	"HCD"	"MS2"	"0"	"247.5"	"100.000"	"92.6993"	"32649"	"32649"	"32632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"346.8"	""	"243.3"	""	"264.5"	""	"448.4"	"3.0"	"525.0"	"519.9"	""	"792"	"31"	"35.000"	"28.000"	"0.0313108736687931"	"24"	"0.0001991"	"0.002998"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QWLQEIDR"	"[K].qWLQEIDR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"658.86139"	"1316.71550"	"1316.71602"	"-0.39"	"-0.00026"	"5/74"	"5"	"74"	"5253280.41644287"	"HCD"	"MS2"	"0"	"254.4"	"100.000"	"92.7740"	"32638"	"32638"	"32624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"371.3"	""	"245.1"	""	"264.2"	""	"468.6"	"0.9"	"534.5"	"531.9"	""	"792"	"31"	"35.000"	"28.000"	"0.0321140578910121"	"24"	"0.0001991"	"0.003942"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QWLQEIDR"	"[K].qWLQEIDR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.3030"	"0.0000"	"1"	"1"	"1"	"658.86157"	"1316.71587"	"1316.71602"	"-0.11"	"-0.00007"	"6/74"	"6"	"74"	"1113882.60821533"	"HCD"	"MS2"	"19.09333"	"61.1"	"100.000"	"92.4840"	"32525"	"32525"	"32504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.8"	""	"62.2"	""	"69.4"	""	"112.3"	"0.6"	"125.0"	"125.7"	""	"804"	"33"	"36.000"	"29.000"	"0.0218386633259958"	""	"0.0001686"	"0.001362"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QWLQEIDR"	"[K].qWLQEIDR.[Y]"	"N-Term(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"658.86218"	"1316.71709"	"1316.71602"	"0.81"	"0.00054"	"5/74"	"5"	"74"	"1124309.43469238"	"HCD"	"MS2"	"11.6005"	"64.9"	"100.000"	"92.4114"	"32531"	"32531"	"32513"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.2"	""	"66.5"	""	"68.4"	""	"130.1"	"0.1"	"130.8"	"134.8"	""	"811"	"30"	"36.000"	"29.000"	"0.0375829493380326"	"29"	"0.001049"	"0.008617"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATQPDGK"	"[R].aAATQPDGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"658.88171"	"1316.75615"	"1316.75744"	"-0.98"	"-0.00064"	"14/78"	"14"	"78"	"936106.672363281"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"27.3805"	"6166"	"6166"	"6148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.7"	""	"46.3"	""	"45.7"	""	"123.4"	""	"176.5"	"167.8"	""	"919"	"54"	"36.000"	"29.000"	"0.000191110925522003"	"28"	"0"	"0.0003996"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAATQPDGK"	"[R].aAATQPDGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"658.88226"	"1316.75725"	"1316.75744"	"-0.14"	"-0.00009"	"8/78"	"8"	"78"	"810869.753417969"	"HCD"	"MS2"	"0"	"60.2"	"100.000"	"27.1227"	"6101"	"6101"	"6088"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.3"	""	"41.9"	""	"44.9"	""	"113.0"	""	"161.2"	"151.5"	""	"947"	"46"	"36.000"	"29.000"	"0.00121149041744982"	"27"	"9.9E-05"	"0.0006079"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINDISVLR"	"[R].gTINDISVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI97"	"Alanyl-tRNA editing protein Aarsd1 OS=Rattus norvegicus OX=10116 GN=Aarsd1 PE=1 SV=1"	"Q5XI97"	"Alanyl-tRNA editing protein Aarsd1 OS=Rattus norvegicus OX=10116 GN=Aarsd1 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"658.89038"	"1316.77349"	"1316.77353"	"-0.03"	"-0.00002"	"8/94"	"8"	"94"	"903054.425109863"	"HCD"	"MS2"	"59.76208"	"59.0"	"100.000"	"81.1429"	"27958"	"27958"	"27939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.3"	""	"62.4"	""	"68.3"	""	"103.9"	""	"133.8"	"131.0"	""	"958"	"26"	"36.000"	"29.000"	"0.118395586546273"	""	"0"	"0.0002963"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINDISVLR"	"[R].gTINDISVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI97"	"Alanyl-tRNA editing protein Aarsd1 OS=Rattus norvegicus OX=10116 GN=Aarsd1 PE=1 SV=1"	"Q5XI97"	"Alanyl-tRNA editing protein Aarsd1 OS=Rattus norvegicus OX=10116 GN=Aarsd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"658.89099"	"1316.77471"	"1316.77353"	"0.89"	"0.00059"	"9/94"	"9"	"94"	"827928.289978027"	"HCD"	"MS2"	"63.87146"	"55.0"	"100.000"	"81.1449"	"27986"	"27986"	"27967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.1"	""	"54.6"	""	"62.7"	""	"90.0"	""	"123.4"	"126.0"	""	"860"	"24"	"36.000"	"29.000"	"0.166520787316295"	""	"0"	"5.008E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"658.89392"	"1316.78057"	"1316.78259"	"-1.54"	"-0.00101"	"14/66"	"14"	"66"	"11572354.6384888"	"HCD"	"MS2"	"0"	"481.7"	"57.487"	"55.2910"	"17507"	"17507"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"703.4"	""	"595.6"	""	"678.6"	""	"766.5"	""	"868.5"	"960.8"	""	"848"	"52"	"36.000"	"29.000"	"0.000294012541751025"	""	"9.9E-05"	"0.0008777"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"439.59842"	"1316.78070"	"1316.78259"	"-1.43"	"-0.00063"	"6/66"	"6"	"66"	"10957575.2950439"	"HCD"	"MS2"	"8.313904"	"348.7"	"63.055"	"55.0608"	"17412"	"17412"	"17394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"531.1"	""	"438.2"	""	"476.8"	""	"560.3"	""	"623.2"	"675.1"	""	"848"	"39"	"36.000"	"29.000"	"0.00575924901352953"	""	"0.0001991"	"0.004302"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.2632"	"0.0000"	"1"	"1"	"1"	"439.59845"	"1316.78080"	"1316.78259"	"-1.36"	"-0.00060"	"8/66"	"8"	"66"	"2520462.61767578"	"HCD"	"MS2"	"34.12874"	"146.3"	"100.000"	"55.1484"	"17414"	"17414"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.6"	""	"201.5"	""	"201.9"	""	"233.7"	""	"282.4"	"259.1"	""	"848"	"19"	"36.000"	"29.000"	"0.512113066085275"	"28"	"0.003317"	"0.03647"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.5143"	"0.0000"	"1"	"1"	"1"	"439.59851"	"1316.78098"	"1316.78259"	"-1.22"	"-0.00054"	"6/66"	"6"	"66"	"9226939.12988281"	"HCD"	"MS2"	"10.49794"	"480.6"	"100.000"	"55.4335"	"17530"	"17530"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"718.7"	""	"614.0"	""	"656.1"	""	"749.9"	""	"900.1"	"919.2"	""	"846"	"35"	"36.000"	"29.000"	"0.0130418850295548"	""	"0.000264"	"0.006106"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"658.89417"	"1316.78105"	"1316.78259"	"-1.17"	"-0.00077"	"7/66"	"7"	"66"	"2245369.02319336"	"HCD"	"MS2"	"14.71536"	"160.0"	"100.000"	"55.0244"	"17363"	"17363"	"17351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.5"	""	"215.0"	""	"205.4"	""	"277.4"	"1.9"	"280.5"	"274.8"	""	"846"	"48"	"36.000"	"29.000"	"0.00063582905165608"	""	"9.9E-05"	"0.0007837"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"439.59860"	"1316.78125"	"1316.78259"	"-1.01"	"-0.00044"	"8/66"	"8"	"66"	"2910413.42144775"	"HCD"	"MS2"	"40.21399"	"153.5"	"100.000"	"54.7736"	"17295"	"17295"	"17275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.5"	""	"225.0"	""	"215.1"	""	"259.2"	""	"266.4"	"260.6"	""	"846"	"26"	"36.000"	"29.000"	"0.0989328151952908"	"28"	"0.001453"	"0.01177"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"658.89429"	"1316.78130"	"1316.78259"	"-0.98"	"-0.00065"	"7/66"	"7"	"66"	"2605747.56274414"	"HCD"	"MS2"	"9.01081"	"190.3"	"100.000"	"54.6680"	"17252"	"17252"	"17236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.4"	""	"258.3"	""	"245.6"	""	"318.3"	"2.8"	"326.8"	"349.9"	""	"843"	"46"	"36.000"	"29.000"	"0.00103704494514822"	""	"9.9E-05"	"0.0005174"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"658.89465"	"1316.78203"	"1316.78259"	"-0.42"	"-0.00028"	"7/66"	"7"	"66"	"16747737.7692871"	"HCD"	"MS2"	"0"	"544.7"	"47.340"	"55.6247"	"17609"	"17609"	"17592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"768.1"	""	"684.6"	""	"768.0"	""	"867.8"	""	"981.2"	"1095.0"	""	"844"	"46"	"36.000"	"29.000"	"0.000986989314714247"	""	"0.0001991"	"0.003213"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"658.89465"	"1316.78203"	"1316.78259"	"-0.42"	"-0.00028"	"7/66"	"7"	"66"	"36358153.1981201"	"HCD"	"MS2"	"0"	"908.5"	"35.695"	"55.3116"	"17481"	"17481"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1379.1"	""	"1181.2"	""	"1237.3"	""	"1510.6"	""	"1635.2"	"1664.8"	""	"844"	"46"	"36.000"	"29.000"	"0.000991545050397986"	""	"0.0001991"	"0.004092"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDIPEGK"	"[K].lSDIPEGk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"658.89478"	"1316.78227"	"1316.78259"	"-0.24"	"-0.00016"	"7/64"	"7"	"64"	"1446237.30895996"	"HCD"	"MS2"	"9.541003"	"101.2"	"100.000"	"67.7951"	"22543"	"22543"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.0"	""	"133.8"	""	"128.4"	""	"169.9"	"0.8"	"197.2"	"210.4"	""	"832"	"29"	"36.000"	"29.000"	"0.0523712971306373"	"19"	"0.0001686"	"0.001523"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSDIPEGK"	"[K].lSDIPEGk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"658.89484"	"1316.78240"	"1316.78259"	"-0.15"	"-0.00010"	"7/64"	"7"	"64"	"1372357.22821045"	"HCD"	"MS2"	"18.1845"	"96.5"	"100.000"	"67.8147"	"22582"	"22582"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.5"	""	"117.4"	""	"121.7"	""	"154.1"	"3.2"	"180.5"	"220.8"	""	"832"	"34"	"36.000"	"29.000"	"0.0168303570946136"	"19"	"0.0001686"	"0.001435"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLDPVEK"	"[R].gTLDPVEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"658.89502"	"1316.78276"	"1316.78259"	"0.13"	"0.00009"	"7/66"	"7"	"66"	"42698716.0155029"	"HCD"	"MS2"	"0"	"820.7"	"31.224"	"54.9782"	"17379"	"17379"	"17364"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1215.1"	""	"1098.5"	""	"1105.2"	""	"1348.3"	""	"1472.5"	"1541.8"	""	"840"	"47"	"36.000"	"29.000"	"0.000851626742198938"	"29"	"0.0001991"	"0.003972"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].LRVDPVNFk.[F]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"439.60062"	"1316.78730"	"1316.78879"	"-1.13"	"-0.00050"	"8/78"	"8"	"78"	"1376951.70849609"	"HCD"	"MS2"	"36.92824"	"70.9"	"100.000"	"59.4123"	"19143"	"19143"	"19114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.9"	""	"93.0"	""	"103.0"	""	"126.6"	""	"127.5"	"123.9"	""	"834"	"19"	"36.000"	"29.000"	"0.563814258852013"	"16"	"0.004213"	"0.04748"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].LRVDPVNFk.[F]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"439.60065"	"1316.78739"	"1316.78879"	"-1.06"	"-0.00047"	"6/78"	"6"	"78"	"1971149.37683105"	"HCD"	"MS2"	"18.04922"	"92.0"	"100.000"	"59.7139"	"19265"	"19265"	"19244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.5"	""	"129.4"	""	"140.1"	""	"152.3"	""	"147.3"	"154.7"	""	"834"	"25"	"36.000"	"29.000"	"0.125353381819597"	"16"	"0.002462"	"0.02328"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRVDPVNFK"	"[K].LRVDPVNFk.[F]"	"K9(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"439.60068"	"1316.78748"	"1316.78879"	"-0.99"	"-0.00044"	"6/78"	"6"	"78"	"2335124.99920654"	"HCD"	"MS2"	"18.25746"	"102.2"	"100.000"	"59.3179"	"19139"	"19139"	"19118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.9"	""	"148.6"	""	"170.2"	""	"166.0"	""	"169.2"	"164.6"	""	"834"	"27"	"36.000"	"29.000"	"0.0833942399636854"	"20"	"0.001827"	"0.01536"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEQLIK"	"[K].eVEQLIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"658.91205"	"1316.81682"	"1316.81897"	"-1.64"	"-0.00108"	"12/58"	"12"	"58"	"3873115.34411621"	"HCD"	"MS2"	"0"	"268.3"	"100.000"	"76.8725"	"26229"	"26229"	"26214"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.7"	""	"283.4"	""	"317.0"	""	"436.3"	""	"588.7"	"570.9"	""	"693"	"38"	"35.000"	"28.000"	"0.00547902445607188"	""	"0.001453"	"0.01173"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEQLIK"	"[K].eVEQLIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.4722"	"0.0000"	"1"	"1"	"1"	"658.91235"	"1316.81743"	"1316.81897"	"-1.17"	"-0.00077"	"12/58"	"12"	"58"	"1425541.96350098"	"HCD"	"MS2"	"0"	"107.7"	"100.000"	"77.1867"	"26383"	"26383"	"26370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.2"	""	"105.1"	""	"133.4"	""	"178.4"	"2.8"	"230.2"	"235.4"	""	"691"	"36"	"35.000"	"28.000"	"0.0097375130275187"	""	"0.001162"	"0.009217"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGVVLEK"	"[R].vDGVVLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"658.91241"	"1316.81755"	"1316.81897"	"-1.08"	"-0.00071"	"7/66"	"7"	"66"	"503559.864685059"	"HCD"	"MS2"	"29.56451"	"33.8"	"100.000"	"81.7998"	"28252"	"28252"	"28232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.6"	""	"40.2"	""	"36.2"	""	"58.0"	""	"88.7"	"69.1"	""	"691"	"32"	"35.000"	"28.000"	"0.0211567060340909"	""	"0.0001991"	"0.002112"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEQLIK"	"[K].eVEQLIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"3"	"658.91248"	"1316.81767"	"1316.81897"	"-0.99"	"-0.00065"	"10/58"	"10"	"58"	"626863.752929688"	"HCD"	"MS2"	"0"	"46.2"	"100.000"	"77.2000"	"26357"	"26357"	"26345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.4"	""	"41.4"	""	"64.0"	""	"79.3"	""	"102.6"	"96.0"	""	"691"	"25"	"35.000"	"28.000"	"0.110014024375638"	""	"0.001348"	"0.01118"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQILLEK"	"[K].dQILLEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"658.91266"	"1316.81804"	"1316.81897"	"-0.71"	"-0.00047"	"6/68"	"6"	"68"	"900771.323364258"	"HCD"	"MS2"	"49.84861"	"58.4"	"100.000"	"81.1706"	"27996"	"27996"	"27976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.2"	""	"59.3"	""	"69.4"	""	"104.2"	""	"137.5"	"123.9"	""	"691"	"27"	"35.000"	"28.000"	"0.0762865635258031"	""	"0.002525"	"0.02386"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEQLIK"	"[K].eVEQLIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"658.91278"	"1316.81828"	"1316.81897"	"-0.52"	"-0.00034"	"12/58"	"12"	"58"	"4096064.73498535"	"HCD"	"MS2"	"10.81366"	"294.7"	"100.000"	"76.9127"	"26275"	"26275"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"411.7"	""	"301.4"	""	"361.7"	""	"496.0"	""	"638.0"	"592.8"	""	"691"	"38"	"35.000"	"28.000"	"0.00548842901640533"	""	"0.001261"	"0.00982"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGVVLEK"	"[R].vDGVVLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"658.91290"	"1316.81853"	"1316.81897"	"-0.34"	"-0.00022"	"7/66"	"7"	"66"	"681090.246765137"	"HCD"	"MS2"	"59.9372"	"46.7"	"100.000"	"81.5000"	"28130"	"28130"	"28109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.7"	""	"53.0"	""	"49.6"	""	"85.7"	""	"108.0"	"99.8"	""	"677"	"29"	"35.000"	"28.000"	"0.039953853516811"	""	"0.0001991"	"0.002739"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEQLIK"	"[K].eVEQLIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.2593"	"0.0000"	"1"	"1"	"1"	"658.91290"	"1316.81853"	"1316.81897"	"-0.34"	"-0.00022"	"10/58"	"10"	"58"	"1077467.3927002"	"HCD"	"MS2"	"50.65709"	"73.7"	"100.000"	"76.6231"	"26158"	"26158"	"26137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.1"	""	"71.2"	""	"91.9"	""	"134.9"	""	"154.9"	"147.2"	""	"677"	"27"	"35.000"	"28.000"	"0.0747409602126898"	""	"0.001316"	"0.01039"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGVVLEK"	"[R].vDGVVLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"1"	"658.91296"	"1316.81865"	"1316.81897"	"-0.24"	"-0.00016"	"7/66"	"7"	"66"	"635671.344787598"	"HCD"	"MS2"	"64.93477"	"44.4"	"100.000"	"81.4334"	"28076"	"28076"	"28058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"52.1"	""	"54.7"	""	"73.5"	""	"101.5"	"92.5"	""	"677"	"34"	"35.000"	"28.000"	"0.0145398080459914"	""	"0.0001991"	"0.002421"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGVVLEK"	"[R].vDGVVLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"658.91309"	"1316.81890"	"1316.81897"	"-0.06"	"-0.00004"	"12/66"	"12"	"66"	"455240.617248535"	"HCD"	"MS2"	"16.74919"	"32.0"	"100.000"	"81.7955"	"28222"	"28222"	"28199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"30.8"	""	"36.0"	""	"53.2"	""	"93.6"	"65.2"	""	"677"	"24"	"35.000"	"28.000"	"0.132299643225728"	""	"0.0001991"	"0.005416"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEQLIK"	"[K].eVEQLIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"P21670"	"Proteasome subunit alpha type-4 OS=Rattus norvegicus OX=10116 GN=Psma4 PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"658.91309"	"1316.81890"	"1316.81897"	"-0.06"	"-0.00004"	"6/58"	"6"	"58"	"1460026.14520264"	"HCD"	"MS2"	"40.33226"	"95.9"	"100.000"	"76.5831"	"26110"	"26110"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.1"	""	"105.1"	""	"110.9"	""	"168.1"	"1.0"	"201.6"	"183.7"	""	"677"	"34"	"35.000"	"28.000"	"0.0136948939339584"	""	"0.001261"	"0.009811"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQILLEK"	"[K].dQILLEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"658.91321"	"1316.81914"	"1316.81897"	"0.13"	"0.00008"	"6/68"	"6"	"68"	"705835.159179688"	"HCD"	"MS2"	"66.79454"	"46.8"	"100.000"	"81.0413"	"27917"	"27917"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.5"	""	"51.8"	""	"43.3"	""	"95.4"	""	"106.3"	"94.7"	""	"686"	"29"	"35.000"	"28.000"	"0.0484500377805604"	""	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDVDNASLAR"	"[R].qDVDNASLAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"659.35248"	"1317.69768"	"1317.69601"	"1.27"	"0.00084"	"7/100"	"7"	"100"	"433626.629943848"	"HCD"	"MS2"	"9.838435"	"30.3"	"100.000"	"33.4550"	"8648"	"8648"	"8623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.4"	""	"44.9"	""	"39.1"	""	"42.8"	""	"63.8"	"59.9"	""	"781"	"42"	"35.000"	"28.000"	"0.00232606067048079"	"23"	"9.9E-05"	"0.0007521"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDSEFK"	"[R].sFDSEFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"659.35791"	"1317.70854"	"1317.70909"	"-0.41"	"-0.00027"	"12/56"	"12"	"56"	"3981325.38677979"	"HCD"	"MS2"	"0"	"372.7"	"100.000"	"71.3911"	"24035"	"24035"	"24021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"472.1"	""	"410.0"	""	"485.5"	""	"687.0"	"4.3"	"763.3"	"714.7"	""	"911"	"35"	"36.000"	"29.000"	"0.0159767478585395"	"23"	"0.002588"	"0.02643"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDSEFK"	"[R].sFDSEFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"659.35803"	"1317.70879"	"1317.70909"	"-0.23"	"-0.00015"	"6/56"	"6"	"56"	"958359.095825195"	"HCD"	"MS2"	"0"	"93.7"	"100.000"	"71.6974"	"24159"	"24159"	"24139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.6"	""	"111.3"	""	"117.2"	""	"161.8"	""	"189.7"	"195.7"	""	"905"	"31"	"36.000"	"29.000"	"0.0326301134330262"	"22"	"0.001453"	"0.01175"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDSEFK"	"[R].sFDSEFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"659.35840"	"1317.70952"	"1317.70909"	"0.33"	"0.00022"	"12/56"	"12"	"56"	"3815670.56781006"	"HCD"	"MS2"	"1.489779"	"342.9"	"100.000"	"71.3244"	"23976"	"23976"	"23958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"444.1"	""	"397.2"	""	"438.6"	""	"591.4"	""	"692.1"	"693.2"	""	"890"	"36"	"36.000"	"29.000"	"0.0101475222204019"	"24"	"0.002559"	"0.02555"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDSEFK"	"[R].sFDSEFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"659.35852"	"1317.70976"	"1317.70909"	"0.51"	"0.00034"	"6/56"	"6"	"56"	"965491.018737793"	"HCD"	"MS2"	"14.10154"	"89.9"	"100.000"	"71.1169"	"23923"	"23923"	"23909"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.2"	""	"105.1"	""	"114.8"	""	"159.3"	"1.9"	"191.9"	"164.4"	""	"890"	"29"	"36.000"	"29.000"	"0.0601672290621453"	"22"	"0.001488"	"0.01283"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDSEFK"	"[R].sFDSEFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"659.35870"	"1317.71013"	"1317.70909"	"0.79"	"0.00052"	"6/56"	"6"	"56"	"1116359.20635986"	"HCD"	"MS2"	"14.79592"	"108.1"	"100.000"	"71.0366"	"23859"	"23859"	"23838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.2"	""	"131.3"	""	"136.4"	""	"213.8"	"1.0"	"204.2"	"192.6"	""	"920"	"29"	"36.000"	"29.000"	"0.0519706120749487"	"21"	"0.001615"	"0.01396"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"659.37158"	"1317.73589"	"1317.73642"	"-0.40"	"-0.00026"	"14/70"	"14"	"70"	"1727882.54766846"	"HCD"	"MS2"	"15.83245"	"79.7"	"100.000"	"90.6453"	"31780"	"31780"	"31763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.4"	""	"108.1"	""	"117.0"	""	"117.4"	"0.7"	"144.3"	"162.2"	""	"1009"	"32"	"37.000"	"30.000"	"0.0303292150560313"	""	"9.9E-05"	"0.0005904"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"659.37170"	"1317.73613"	"1317.73642"	"-0.22"	"-0.00014"	"6/70"	"6"	"70"	"4664166.82684326"	"HCD"	"MS2"	"4.367427"	"207.4"	"100.000"	"90.3491"	"31699"	"31699"	"31688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"293.5"	""	"304.1"	""	"325.3"	""	"279.2"	""	"386.4"	"378.1"	""	"1003"	"42"	"37.000"	"30.000"	"0.00339837216066754"	""	"9.9E-05"	"0.0004448"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"659.37183"	"1317.73638"	"1317.73642"	"-0.03"	"-0.00002"	"14/70"	"14"	"70"	"2426390.4541626"	"HCD"	"MS2"	"23.33549"	"112.1"	"100.000"	"90.0564"	"31581"	"31581"	"31563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.9"	""	"161.3"	""	"171.3"	""	"155.5"	"0.8"	"208.9"	"206.0"	""	"971"	"30"	"36.000"	"29.000"	"0.0446878267086165"	"29"	"9.9E-05"	"0.000599"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"659.37189"	"1317.73650"	"1317.73642"	"0.06"	"0.00004"	"6/70"	"6"	"70"	"895985.677124023"	"HCD"	"MS2"	"19.92798"	"47.3"	"100.000"	"90.6374"	"31815"	"31815"	"31798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"62.7"	""	"80.3"	""	"69.8"	"0.4"	"82.9"	"88.7"	""	"971"	"28"	"36.000"	"29.000"	"0.0820709072312805"	"27"	"0.0001686"	"0.001459"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTGEEWLVR"	"[R].vTGEEWLVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"659.37207"	"1317.73686"	"1317.73642"	"0.34"	"0.00022"	"6/70"	"6"	"70"	"5067719.36828613"	"HCD"	"MS2"	"5.02821"	"210.5"	"100.000"	"90.3409"	"31658"	"31658"	"31642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.7"	""	"306.5"	""	"330.3"	""	"293.1"	""	"383.0"	"387.6"	""	"972"	"45"	"36.000"	"29.000"	"0.00165438380194687"	""	"9.9E-05"	"0.0006145"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGVNNAEK"	"[K].qGVNNAEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"659.37964"	"1317.75200"	"1317.75268"	"-0.52"	"-0.00034"	"7/70"	"7"	"70"	"340035.373779297"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"24.9497"	"5215"	"5215"	"5193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"33.0"	""	"42.7"	""	"58.6"	""	"57.7"	"59.9"	""	"1002"	"46"	"36.000"	"30.000"	"0.0012877682871672"	"27"	"0"	"0.0002731"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLTGVDVLR"	"[R].eSLTGVDVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"Q9ES71"	"Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"659.38287"	"1317.75847"	"1317.75755"	"0.70"	"0.00046"	"10/84"	"10"	"84"	"599789.553588867"	"HCD"	"MS2"	"49.09265"	"32.1"	"100.000"	"81.9824"	"28298"	"28298"	"28279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.0"	""	"40.7"	""	"36.1"	""	"56.0"	""	"76.1"	"58.8"	""	"1015"	"34"	"37.000"	"30.000"	"0.0221531784861884"	"22"	"0"	"0.000122"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIIDQDK"	"[K].qIIDQDk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"659.39136"	"1317.77544"	"1317.77784"	"-1.82"	"-0.00120"	"6/64"	"6"	"64"	"1141533.73907471"	"HCD"	"MS2"	"31.43767"	"93.8"	"100.000"	"45.8034"	"13620"	"13620"	"13589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.7"	""	"94.4"	""	"99.5"	""	"168.4"	""	"187.1"	"214.7"	""	"857"	"42"	"36.000"	"29.000"	"0.00263603289956178"	""	"0.0004582"	"0.006426"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIIDQDK"	"[K].qIIDQDk.[H]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"659.39185"	"1317.77641"	"1317.77784"	"-1.08"	"-0.00071"	"6/64"	"6"	"64"	"1240000.19793701"	"HCD"	"MS2"	"16.17101"	"98.2"	"100.000"	"45.5238"	"13540"	"13540"	"13512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.8"	""	"101.5"	""	"107.3"	""	"173.1"	""	"208.7"	"211.1"	""	"850"	"38"	"36.000"	"29.000"	"0.00621425299144106"	""	"0.0009352"	"0.007819"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELANEVK"	"[R].gELANEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.3659"	"0.0000"	"1"	"1"	"1"	"659.39227"	"1317.77727"	"1317.77784"	"-0.43"	"-0.00028"	"7/70"	"7"	"70"	"3222679.65557861"	"HCD"	"MS2"	"41.21526"	"264.0"	"100.000"	"48.2172"	"14594"	"14594"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.5"	""	"294.2"	""	"306.1"	""	"535.1"	""	"572.4"	"551.8"	""	"873"	"41"	"36.000"	"29.000"	"0.00367268979328128"	""	"0.0001991"	"0.002344"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLQAIK"	"[K].gDDLQAIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"659.39233"	"1317.77739"	"1317.77784"	"-0.34"	"-0.00022"	"7/64"	"7"	"64"	"504202.230529785"	"HCD"	"MS2"	"51.20325"	"52.7"	"100.000"	"60.7157"	"19673"	"19673"	"19647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.2"	""	"39.0"	""	"58.6"	""	"97.2"	""	"126.8"	"114.2"	""	"860"	"31"	"36.000"	"29.000"	"0.0340775572106603"	"27"	"0.0001686"	"0.001507"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELANEVK"	"[R].gELANEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.4359"	"0.0000"	"1"	"1"	"1"	"659.39233"	"1317.77739"	"1317.77784"	"-0.34"	"-0.00022"	"7/70"	"7"	"70"	"3211314.68151855"	"HCD"	"MS2"	"37.45439"	"265.7"	"100.000"	"47.9015"	"14503"	"14503"	"14490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"270.8"	""	"308.7"	""	"315.6"	""	"510.8"	""	"583.0"	"543.5"	""	"860"	"39"	"36.000"	"29.000"	"0.00516973706885487"	""	"0.0001686"	"0.001472"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLQAIK"	"[K].gDDLQAIk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"G3V9R8"	"Heterogeneous nuclear ribonucleoprotein C OS=Rattus norvegicus OX=10116 GN=Hnrnpc PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"659.39246"	"1317.77764"	"1317.77784"	"-0.15"	"-0.00010"	"7/64"	"7"	"64"	"1136914.4251709"	"HCD"	"MS2"	"49.93332"	"107.4"	"100.000"	"60.4392"	"19593"	"19593"	"19574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.0"	""	"93.8"	""	"94.9"	""	"218.2"	"0.5"	"262.9"	"241.4"	""	"860"	"36"	"36.000"	"29.000"	"0.0111806861216107"	""	"0.0001991"	"0.003496"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EIDELIK"	"[R].eIDELIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"659.40503"	"1317.80278"	"1317.80299"	"-0.16"	"-0.00010"	"6/54"	"6"	"54"	"871178.991333008"	"HCD"	"MS2"	"20.54703"	"74.8"	"100.000"	"94.7727"	"33447"	"33447"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.4"	""	"72.4"	""	"84.9"	""	"123.3"	""	"125.0"	"228.5"	""	"861"	"32"	"36.000"	"29.000"	"0.0244891186728274"	""	"0.0007633"	"0.007357"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELNEILK"	"[].eLnEILk.[]"	"N-Term(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"659.40503"	"1317.80278"	"1317.80299"	"-0.16"	"-0.00010"	"6/62"	"6"	"62"	"871178.991333008"	"HCD"	"MS2"	"20.54703"	"74.8"	"100.000"	"94.7727"	"33447"	"33447"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.4"	""	"72.4"	""	"84.9"	""	"123.3"	""	"125.0"	"228.5"	""	"861"	"32"	"36.000"	"29.000"	"0.0244891186728274"	""	"0.0007633"	"0.007357"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EIDELIK"	"[R].eIDELIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"659.40509"	"1317.80290"	"1317.80299"	"-0.06"	"-0.00004"	"12/54"	"12"	"54"	"1125550.86096191"	"HCD"	"MS2"	"27.86665"	"97.2"	"100.000"	"94.4655"	"33359"	"33359"	"33342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.9"	""	"104.5"	""	"120.7"	""	"168.4"	""	"173.9"	"235.6"	""	"861"	"34"	"36.000"	"29.000"	"0.0169033644689528"	""	"0.0004582"	"0.006484"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELNEILK"	"[].eLnEILk.[]"	"N-Term(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"659.40509"	"1317.80290"	"1317.80299"	"-0.06"	"-0.00004"	"12/62"	"12"	"62"	"1125550.86096191"	"HCD"	"MS2"	"27.86665"	"97.2"	"100.000"	"94.4655"	"33359"	"33359"	"33342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.9"	""	"104.5"	""	"120.7"	""	"168.4"	""	"173.9"	"235.6"	""	"861"	"34"	"36.000"	"29.000"	"0.0169033644689528"	""	"0.0004582"	"0.006484"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EIDELIK"	"[R].eIDELIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"659.40515"	"1317.80303"	"1317.80299"	"0.03"	"0.00002"	"6/54"	"6"	"54"	"843414.297424316"	"HCD"	"MS2"	"27.66706"	"46.5"	"100.000"	"94.7510"	"33472"	"33472"	"33463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.1"	""	"51.0"	""	"59.2"	""	"70.1"	"0.6"	"84.5"	"131.7"	""	"861"	"32"	"36.000"	"29.000"	"0.0243766013930968"	""	"0.0005161"	"0.006598"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELNEILK"	"[].eLnEILk.[]"	"N-Term(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"659.40515"	"1317.80303"	"1317.80299"	"0.03"	"0.00002"	"6/62"	"6"	"62"	"843414.297424316"	"HCD"	"MS2"	"27.66706"	"46.5"	"100.000"	"94.7510"	"33472"	"33472"	"33463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.1"	""	"51.0"	""	"59.2"	""	"70.1"	"0.6"	"84.5"	"131.7"	""	"861"	"32"	"36.000"	"29.000"	"0.0243766013930968"	""	"0.0005161"	"0.006598"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EIDELIK"	"[R].eIDELIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"Q5RK30"	"Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"659.40540"	"1317.80351"	"1317.80299"	"0.40"	"0.00026"	"6/54"	"6"	"54"	"1071927.87634277"	"HCD"	"MS2"	"37.87681"	"89.2"	"100.000"	"94.4752"	"33327"	"33327"	"33303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.6"	""	"89.0"	""	"93.1"	""	"163.5"	""	"160.5"	"223.5"	""	"869"	"33"	"36.000"	"29.000"	"0.0233878220503327"	""	"0.001049"	"0.008594"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELNEILK"	"[].eLnEILk.[]"	"N-Term(TMT6plex); N3(Deamidated); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"659.40540"	"1317.80351"	"1317.80299"	"0.40"	"0.00026"	"6/62"	"6"	"62"	"1071927.87634277"	"HCD"	"MS2"	"37.87681"	"89.2"	"100.000"	"94.4752"	"33327"	"33327"	"33303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.6"	""	"89.0"	""	"93.1"	""	"163.5"	""	"160.5"	"223.5"	""	"869"	"33"	"36.000"	"29.000"	"0.0233878220503327"	""	"0.001049"	"0.008594"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENTAIK"	"[R].aLENTAIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"659.40997"	"1317.81267"	"1317.81422"	"-1.18"	"-0.00078"	"14/68"	"14"	"68"	"1147503.24346924"	"HCD"	"MS2"	"20.63563"	"85.7"	"100.000"	"53.2970"	"16693"	"16693"	"16671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.9"	""	"101.9"	""	"122.4"	""	"129.0"	"2.7"	"175.8"	"160.3"	""	"776"	"47"	"35.000"	"28.000"	"0.00072582467046193"	""	"0"	"0.0003"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITADQALK"	"[R].iTADQALk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"659.41077"	"1317.81426"	"1317.81422"	"0.03"	"0.00002"	"7/66"	"7"	"66"	"902751.367980957"	"HCD"	"MS2"	"46.77865"	"90.3"	"100.000"	"60.3080"	"19540"	"19540"	"19525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.7"	""	"90.7"	""	"90.6"	""	"164.3"	""	"213.0"	"194.8"	""	"754"	"38"	"35.000"	"28.000"	"0.0065364410715331"	"25"	"0.0001686"	"0.001906"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENTAIK"	"[R].aLENTAIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"659.41119"	"1317.81511"	"1317.81422"	"0.67"	"0.00044"	"14/68"	"14"	"68"	"1088522.88525391"	"HCD"	"MS2"	"17.38568"	"84.1"	"100.000"	"53.6054"	"16785"	"16785"	"16761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.8"	""	"109.5"	""	"113.0"	""	"127.0"	"2.0"	"169.9"	"152.3"	""	"752"	"47"	"35.000"	"28.000"	"0.000751948062981911"	""	"9.9E-05"	"0.0005304"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITADQALK"	"[R].iTADQALk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"659.41132"	"1317.81536"	"1317.81422"	"0.86"	"0.00057"	"6/66"	"6"	"66"	"779495.63494873"	"HCD"	"MS2"	"38.84836"	"77.2"	"100.000"	"60.4120"	"19549"	"19549"	"19524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.8"	""	"69.3"	""	"88.1"	""	"149.2"	""	"178.8"	"155.7"	""	"745"	"37"	"35.000"	"28.000"	"0.0076230062717994"	"26"	"0.0001991"	"0.002705"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISDQVLK"	"[K].gISDQVLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"659.41180"	"1317.81633"	"1317.81422"	"1.60"	"0.00105"	"11/64"	"11"	"64"	"491726.297851563"	"HCD"	"MS2"	"45.38266"	"42.5"	"100.000"	"65.6119"	"21693"	"21693"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.0"	""	"54.2"	""	"53.1"	""	"60.1"	""	"83.8"	"97.8"	""	"669"	"26"	"35.000"	"28.000"	"0.0914947388949595"	"24"	"0.0001991"	"0.0039"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISDQVLK"	"[K].gISDQVLk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"P16970"	"ATP-binding cassette sub-family D member 3 OS=Rattus norvegicus OX=10116 GN=Abcd3 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"659.41235"	"1317.81743"	"1317.81422"	"2.43"	"0.00160"	"7/64"	"7"	"64"	"458542.138366699"	"HCD"	"MS2"	"32.21949"	"36.0"	"100.000"	"65.4932"	"21611"	"21611"	"21583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.2"	""	"48.2"	""	"44.9"	""	"56.6"	""	"66.5"	"88.6"	""	"670"	"21"	"35.000"	"28.000"	"0.266713382389802"	"22"	"0.001615"	"0.01313"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETENAGLR"	"[R].sLETENAGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"659.86212"	"1318.71697"	"1318.71641"	"0.42"	"0.00028"	"7/88"	"7"	"88"	"1343827.58319092"	"HCD"	"MS2"	"6.057585"	"83.5"	"100.000"	"42.0303"	"12082"	"12082"	"12060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.0"	""	"78.5"	""	"72.1"	""	"143.1"	""	"192.6"	"246.0"	""	"912"	"46"	"36.000"	"29.000"	"0.00117480244759317"	""	"0"	"9.253E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETENAGLR"	"[R].sLETENAGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"659.86230"	"1318.71733"	"1318.71641"	"0.70"	"0.00046"	"7/88"	"7"	"88"	"1052297.80792236"	"HCD"	"MS2"	"4.527756"	"77.7"	"100.000"	"41.9265"	"12074"	"12074"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.4"	""	"70.4"	""	"75.6"	""	"139.2"	""	"178.5"	"211.8"	""	"912"	"41"	"36.000"	"29.000"	"0.00384560649540509"	""	"0"	"0.0001083"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQMk.[E]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"659.86517"	"1318.72307"	"1318.72380"	"-0.56"	"-0.00037"	"6/84"	"6"	"84"	"3364712.25115967"	"HCD"	"MS2"	"9.254598"	"117.5"	"100.000"	"111.9313"	"40305"	"40305"	"40298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.8"	""	"130.4"	""	"158.1"	""	"144.6"	""	"262.4"	"287.6"	""	"914"	"44"	"36.000"	"29.000"	"0.00197658820782999"	""	"9.9E-05"	"0.0008177"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQMk.[E]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"659.86554"	"1318.72380"	"1318.72380"	"0.00"	"0.00000"	"6/84"	"6"	"84"	"3481350.3760376"	"HCD"	"MS2"	"0"	"122.8"	"100.000"	"111.8411"	"40255"	"40255"	"40247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.5"	""	"146.7"	""	"170.4"	""	"155.8"	"1.8"	"261.6"	"298.2"	""	"911"	"50"	"36.000"	"29.000"	"0.000453407167603621"	""	"9.9E-05"	"0.000855"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAEAGGVAGK"	"[K].tAEAGGVAGk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.88922"	"1318.77117"	"1318.77309"	"-1.46"	"-0.00096"	"11/76"	"11"	"76"	"413818.666015625"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"33.9170"	"8799"	"8799"	"8771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.9"	""	"44.5"	""	"59.5"	""	"58.5"	"0.6"	"64.7"	"78.6"	""	"870"	"29"	"36.000"	"29.000"	"0.0601851374852725"	"14"	"0.0001991"	"0.001975"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATGAAAAEAK"	"[R].aTGAAAAEAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"Q6MG08"	"ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8831"	"0.0000"	"1"	"1"	"1"	"659.88971"	"1318.77214"	"1318.77309"	"-0.72"	"-0.00047"	"9/84"	"9"	"84"	"724169.940063477"	"HCD"	"MS2"	"20.27807"	"60.6"	"100.000"	"30.8544"	"7563"	"7563"	"7549"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.7"	""	"68.5"	""	"96.6"	""	"87.2"	""	"110.0"	"112.9"	""	"970"	"77"	"36.000"	"29.000"	"9.13569808402553E-07"	"26"	"0"	"1.784E-07"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLITEEK"	"[R].qLITEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.5405"	"0.0000"	"1"	"1"	"1"	"659.90106"	"1318.79485"	"1318.79824"	"-2.57"	"-0.00170"	"12/64"	"12"	"64"	"2929111.43054199"	"HCD"	"MS2"	"3.66432"	"233.5"	"100.000"	"52.6847"	"16443"	"16443"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.6"	""	"224.0"	""	"212.7"	""	"468.5"	""	"561.1"	"541.9"	""	"879"	"37"	"36.000"	"29.000"	"0.00807158601901598"	""	"0.001615"	"0.01458"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTAEADK"	"[R].lLTAEADk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUC8"	"Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1"	"Q9WUC8"	"Pleiotropic regulator 1 OS=Rattus norvegicus OX=10116 GN=Plrg1 PE=2 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"659.90137"	"1318.79546"	"1318.79824"	"-2.11"	"-0.00139"	"12/64"	"12"	"64"	"493239.545898438"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"65.7949"	"21734"	"21734"	"21707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.8"	""	"55.5"	""	"48.5"	""	"87.4"	""	"95.4"	"97.8"	""	"875"	"38"	"36.000"	"29.000"	"0.00732787508261566"	"25"	"0"	"0.0003237"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLITEEK"	"[R].qLITEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"659.90161"	"1318.79595"	"1318.79824"	"-1.74"	"-0.00115"	"12/64"	"12"	"64"	"2901311.60656738"	"HCD"	"MS2"	"0"	"225.8"	"100.000"	"53.0092"	"16541"	"16541"	"16522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.8"	""	"217.8"	""	"193.6"	""	"436.1"	""	"535.6"	"554.6"	""	"874"	"36"	"36.000"	"29.000"	"0.0118162980511557"	"27"	"0.002328"	"0.02203"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQQQLTK"	"[K].iQqqLTk.[A]"	"N-Term(TMT6plex); Q3(Deamidated); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.90228"	"1318.79729"	"1318.79824"	"-0.72"	"-0.00048"	"12/58"	"12"	"58"	"1371507.19415283"	"HCD"	"MS2"	"0"	"106.4"	"100.000"	"61.1184"	"19869"	"19869"	"19848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.1"	""	"132.3"	""	"155.8"	""	"164.2"	""	"201.8"	"187.9"	""	"871"	"40"	"36.000"	"29.000"	"0.00416858018048905"	""	"0.001049"	"0.008606"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEELTK"	"[].lQEELTk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"659.90228"	"1318.79729"	"1318.79824"	"-0.72"	"-0.00047"	"12/64"	"12"	"64"	"1371507.19415283"	"HCD"	"MS2"	"0"	"106.4"	"100.000"	"61.1184"	"19869"	"19869"	"19848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.1"	""	"132.3"	""	"155.8"	""	"164.2"	""	"201.8"	"187.9"	""	"871"	"40"	"36.000"	"29.000"	"0.00416858018048905"	""	"0.001049"	"0.008604"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLITEEK"	"[R].qLITEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"659.90228"	"1318.79729"	"1318.79824"	"-0.72"	"-0.00047"	"12/64"	"12"	"64"	"3966133.74401855"	"HCD"	"MS2"	"0"	"308.3"	"100.000"	"52.9866"	"16566"	"16566"	"16546"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.8"	""	"272.3"	""	"264.6"	""	"605.6"	""	"738.2"	"793.7"	""	"871"	"37"	"36.000"	"29.000"	"0.00787024331877758"	"28"	"0.002189"	"0.02062"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQQQLTK"	"[K].iQqqLTk.[A]"	"N-Term(TMT6plex); Q3(Deamidated); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.90240"	"1318.79753"	"1318.79824"	"-0.54"	"-0.00035"	"12/58"	"12"	"58"	"710009.921081543"	"HCD"	"MS2"	"10.12936"	"64.0"	"100.000"	"60.8006"	"19740"	"19740"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.4"	""	"85.2"	""	"91.3"	""	"98.4"	"0.4"	"113.9"	"107.5"	""	"871"	"42"	"36.000"	"29.000"	"0.00278604520852693"	""	"0.0001991"	"0.005917"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEELTK"	"[].lQEELTk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"659.90240"	"1318.79753"	"1318.79824"	"-0.53"	"-0.00035"	"12/64"	"12"	"64"	"710009.921081543"	"HCD"	"MS2"	"10.12936"	"64.0"	"100.000"	"60.8006"	"19740"	"19740"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.4"	""	"85.2"	""	"91.3"	""	"98.4"	"0.4"	"113.9"	"107.5"	""	"871"	"42"	"36.000"	"29.000"	"0.00278604520852693"	""	"0.0001991"	"0.005916"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQQQLTK"	"[K].iQqqLTk.[A]"	"N-Term(TMT6plex); Q3(Deamidated); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.90265"	"1318.79802"	"1318.79824"	"-0.17"	"-0.00011"	"12/58"	"12"	"58"	"1525654.39251709"	"HCD"	"MS2"	"2.559015"	"117.6"	"100.000"	"61.1578"	"19853"	"19853"	"19834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.5"	""	"159.2"	""	"157.7"	""	"181.3"	"0.9"	"202.4"	"226.0"	""	"824"	"40"	"36.000"	"29.000"	"0.00407283874998659"	""	"0.0009352"	"0.007888"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEELTK"	"[].lQEELTk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"659.90265"	"1318.79802"	"1318.79824"	"-0.16"	"-0.00011"	"12/64"	"12"	"64"	"1525654.39251709"	"HCD"	"MS2"	"2.559015"	"117.6"	"100.000"	"61.1578"	"19853"	"19853"	"19834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.5"	""	"159.2"	""	"157.7"	""	"181.3"	"0.9"	"202.4"	"226.0"	""	"824"	"40"	"36.000"	"29.000"	"0.00407283874998659"	""	"0.0009352"	"0.007886"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLITEEK"	"[R].qLITEEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"659.90265"	"1318.79802"	"1318.79824"	"-0.16"	"-0.00011"	"12/64"	"12"	"64"	"3784040.22454834"	"HCD"	"MS2"	"0"	"293.5"	"100.000"	"53.3198"	"16668"	"16668"	"16650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.3"	""	"250.2"	""	"260.3"	""	"575.5"	""	"715.1"	"744.1"	""	"824"	"37"	"36.000"	"29.000"	"0.00746272118159276"	"28"	"0.002286"	"0.02156"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDLESVK"	"[K].aVDLESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.6604"	"0.0000"	"1"	"1"	"1"	"659.90271"	"1318.79814"	"1318.79824"	"-0.07"	"-0.00005"	"14/62"	"14"	"62"	"2543858.43078613"	"HCD"	"MS2"	"0.9140083"	"186.3"	"100.000"	"73.9775"	"25082"	"25082"	"25065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.2"	""	"141.2"	""	"170.6"	""	"510.6"	""	"459.3"	"368.2"	""	"824"	"53"	"36.000"	"29.000"	"0.000187023946059884"	""	"9.9E-05"	"0.0007538"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDLESVK"	"[K].aVDLESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"659.90295"	"1318.79863"	"1318.79824"	"0.30"	"0.00020"	"7/62"	"7"	"62"	"950560.394348145"	"HCD"	"MS2"	"13.84239"	"75.4"	"100.000"	"73.5870"	"24894"	"24894"	"24873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.1"	""	"83.2"	""	"76.1"	""	"192.7"	""	"176.5"	"129.5"	""	"827"	"47"	"36.000"	"29.000"	"0.000737013620339784"	"26"	"9.9E-05"	"0.0004025"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDLESVK"	"[K].aVDLESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"659.90314"	"1318.79900"	"1318.79824"	"0.58"	"0.00038"	"7/62"	"7"	"62"	"934889.206115723"	"HCD"	"MS2"	"34.70898"	"72.8"	"100.000"	"73.6941"	"24967"	"24967"	"24944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.0"	""	"68.9"	""	"65.5"	""	"193.7"	""	"185.5"	"126.2"	""	"827"	"49"	"36.000"	"29.000"	"0.000480259001822981"	""	"0"	"0.0003494"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDLESVK"	"[K].aVDLESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"659.90326"	"1318.79924"	"1318.79824"	"0.76"	"0.00050"	"14/62"	"14"	"62"	"2461908.65563965"	"HCD"	"MS2"	"0.8875676"	"190.6"	"100.000"	"73.8681"	"25008"	"25008"	"24993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"138.1"	""	"192.5"	""	"510.4"	""	"469.5"	"363.0"	""	"821"	"53"	"36.000"	"29.000"	"0.00019467633494933"	"29"	"0"	"0.0002772"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IQQQLTK"	"[K].iQqqLTk.[A]"	"N-Term(TMT6plex); Q3(Deamidated); Q4(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"659.90363"	"1318.79997"	"1318.79824"	"1.32"	"0.00087"	"12/58"	"12"	"58"	"694778.222229004"	"HCD"	"MS2"	"0"	"63.8"	"100.000"	"60.8630"	"19733"	"19733"	"19710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.1"	""	"71.9"	""	"88.0"	""	"105.0"	"2.6"	"120.8"	"114.4"	""	"725"	"38"	"35.000"	"28.000"	"0.00621309523971804"	""	"0.0001991"	"0.002988"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LQEELTK"	"[].lQEELTk.[]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"659.90363"	"1318.79997"	"1318.79824"	"1.32"	"0.00087"	"12/64"	"12"	"64"	"694778.222229004"	"HCD"	"MS2"	"0"	"63.8"	"100.000"	"60.8630"	"19733"	"19733"	"19710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.1"	""	"71.9"	""	"88.0"	""	"105.0"	"2.6"	"120.8"	"114.4"	""	"725"	"38"	"35.000"	"28.000"	"0.00621309523971804"	""	"0.0001991"	"0.002988"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPNYQEGLR"	"[R].gGPNYQEGLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"660.34851"	"1319.68974"	"1319.69053"	"-0.59"	"-0.00039"	"7/84"	"7"	"84"	"528315.590148926"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"35.9891"	"9674"	"9674"	"9649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"56.4"	""	"52.2"	""	"83.7"	"1.0"	"86.3"	"92.6"	""	"735"	"27"	"35.000"	"28.000"	"0.0721534901737247"	"21"	"0.002035"	"0.01799"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"660.34998"	"1319.69267"	"1319.69390"	"-0.93"	"-0.00061"	"5/86"	"5"	"86"	"2038456.45153809"	"HCD"	"MS2"	"15.99025"	"132.1"	"100.000"	"45.0959"	"13365"	"13365"	"13344"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.0"	""	"165.5"	""	"173.0"	""	"196.6"	""	"179.4"	"236.5"	""	"771"	"32"	"35.000"	"28.000"	"0.0271659178086835"	"27"	"0"	"0.0003929"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.1379"	"0.0000"	"1"	"1"	"1"	"660.35010"	"1319.69292"	"1319.69390"	"-0.74"	"-0.00049"	"5/86"	"5"	"86"	"1736035.48120117"	"HCD"	"MS2"	"10.40295"	"111.9"	"100.000"	"45.6262"	"13547"	"13547"	"13525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.6"	""	"140.3"	""	"140.5"	""	"159.3"	""	"180.7"	"213.2"	""	"761"	"29"	"35.000"	"28.000"	"0.0492441517671719"	""	"9.9E-05"	"0.0006185"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"660.35016"	"1319.69304"	"1319.69390"	"-0.65"	"-0.00043"	"5/86"	"5"	"86"	"1421340.17102051"	"HCD"	"MS2"	"9.852638"	"98.3"	"100.000"	"45.3790"	"13481"	"13481"	"13464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.9"	""	"128.5"	""	"124.9"	""	"149.9"	"0.0"	"144.4"	"168.1"	""	"761"	"31"	"35.000"	"28.000"	"0.0303636978505465"	"28"	"0.0001686"	"0.001192"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTMQNLNDR"	"[K].vTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"5"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV3; Q6IFW8; Q6IFV1; Q6IFW6; Q6IFX0"	"Keratin, type I cytoskeletal 15 OS=Rattus norvegicus OX=10116 GN=Krt15 PE=1 SV=1; Keratin, type I cytoskeletal 27 OS=Rattus norvegicus OX=10116 GN=Krt27 PE=3 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1; Keratin, type I cytoskeletal 25 OS=Rattus norvegicus OX=10116 GN=Krt25 PE=3 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"660.35034"	"1319.69341"	"1319.69390"	"-0.37"	"-0.00025"	"7/86"	"7"	"86"	"1452650.85784912"	"HCD"	"MS2"	"0"	"99.3"	"100.000"	"45.3133"	"13420"	"13420"	"13394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.4"	""	"132.7"	""	"134.2"	""	"150.9"	"1.2"	"140.9"	"169.0"	""	"764"	"36"	"35.000"	"28.000"	"0.0092058387375828"	""	"0"	"0.000329"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEELNK"	"[R].nDEELNk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"660.36182"	"1319.71636"	"1319.72072"	"-3.30"	"-0.00218"	"6/64"	"6"	"64"	"1077268.70593262"	"HCD"	"MS2"	"41.86427"	"98.4"	"100.000"	"35.8602"	"9584"	"9584"	"9559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.6"	""	"81.0"	""	"78.8"	""	"181.5"	"1.0"	"245.8"	"252.2"	""	"923"	"32"	"36.000"	"29.000"	"0.0289848932592346"	""	"0.001615"	"0.01332"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDEELNK"	"[R].nDEELNk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"8"	"P02262"	"Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"Q4FZT6; Q00728; P0C169; Q64598; P0C170; A9UMV8; P02262; P0CC09"	"Histone H2A type 3 OS=Rattus norvegicus OX=10116 PE=2 SV=3; Histone H2A type 4 OS=Rattus norvegicus OX=10116 PE=2 SV=2; Histone H2A type 1-C OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 1-F OS=Rattus norvegicus OX=10116 PE=3 SV=3; Histone H2A type 1-E OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A.J OS=Rattus norvegicus OX=10116 GN=H2afj PE=2 SV=1; Histone H2A type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2A type 2-A OS=Rattus norvegicus OX=10116 GN=Hist2h2aa3 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"660.36310"	"1319.71892"	"1319.72072"	"-1.36"	"-0.00090"	"6/64"	"6"	"64"	"968435.292175293"	"HCD"	"MS2"	"11.28474"	"90.6"	"100.000"	"35.7962"	"9595"	"9595"	"9570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.3"	""	"78.8"	""	"67.6"	""	"175.1"	""	"228.4"	"225.2"	""	"932"	"34"	"36.000"	"29.000"	"0.0196058608827151"	"28"	"0.001615"	"0.01313"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGTGSAGATIR"	"[R].lSGTGSAGATIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"3"	"660.37286"	"1319.73845"	"1319.74804"	"-7.27"	"-0.00480"	"13/104"	"13"	"104"	"819388.370788574"	"HCD"	"MS2"	"34.74236"	"67.8"	"100.000"	"40.2857"	"11412"	"11412"	"11386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.8"	""	"100.2"	""	"75.2"	""	"94.9"	""	"116.0"	"133.3"	""	"971"	"12"	"36.000"	"29.000"	"3.19292880036057"	"23"	"0.002525"	"0.02519"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGTGSAGATIR"	"[R].lSGTGSAGATIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"660.37518"	"1319.74309"	"1319.74804"	"-3.75"	"-0.00248"	"11/104"	"11"	"104"	"2776724.58294678"	"HCD"	"MS2"	"4.599336"	"188.6"	"100.000"	"39.9752"	"11285"	"11285"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"407.8"	""	"307.1"	""	"225.7"	""	"219.6"	""	"307.8"	"315.1"	""	"1067"	"40"	"37.000"	"30.000"	"0.00572973351484054"	"26"	"0"	"0.0001177"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"660.37622"	"1319.74516"	"1319.75207"	"-5.23"	"-0.00345"	"7/86"	"7"	"86"	"401147.127075195"	"HCD"	"MS2"	""	"21.2"	"100.000"	"113.0290"	"40746"	"40746"	"40719"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"25.3"	""	"23.1"	""	"46.7"	""	"45.2"	"44.0"	""	"1058"	"39"	"37.000"	"30.000"	"0.00721864479255541"	"20"	"0.00511"	"0.06502"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGTGSAGATIR"	"[R].lSGTGSAGATIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"660.37646"	"1319.74565"	"1319.74804"	"-1.81"	"-0.00120"	"10/104"	"10"	"104"	"2355593.60821533"	"HCD"	"MS2"	"0"	"151.9"	"100.000"	"40.0069"	"11264"	"11264"	"11244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"338.4"	""	"229.0"	""	"171.9"	""	"173.7"	""	"245.4"	"278.6"	""	"1006"	"44"	"37.000"	"30.000"	"0.00191676109167068"	"20"	"0"	"1.064E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGTGSAGATIR"	"[R].lSGTGSAGATIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8514"	"0.0000"	"1"	"1"	"1"	"660.37701"	"1319.74675"	"1319.74804"	"-0.98"	"-0.00065"	"10/104"	"10"	"104"	"2033341.62493896"	"HCD"	"MS2"	"0"	"105.1"	"100.000"	"39.6809"	"11133"	"11133"	"11112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.1"	"2.8"	"145.9"	""	"149.7"	""	"153.6"	""	"144.6"	"236.2"	""	"1014"	"74"	"37.000"	"30.000"	"2.23361315797822E-06"	"28"	"0"	"3.158E-07"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSGTGSAGATIR"	"[R].lSGTGSAGATIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"660.37732"	"1319.74736"	"1319.74804"	"-0.52"	"-0.00034"	"10/104"	"10"	"104"	"2611251.16021729"	"HCD"	"MS2"	"0"	"124.1"	"100.000"	"39.6562"	"11157"	"11157"	"11141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.8"	""	"181.1"	""	"178.9"	""	"164.9"	"0.3"	"189.6"	"268.5"	""	"1010"	"74"	"37.000"	"30.000"	"2.22480206070809E-06"	"29"	"0"	"1.814E-07"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLK.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"660.37854"	"1319.74980"	"1319.75207"	"-1.72"	"-0.00113"	"8/86"	"8"	"86"	"335049.994567871"	"HCD"	"MS2"	"43.73227"	"18.5"	"100.000"	"86.4511"	"30097"	"30097"	"30085"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"23.1"	""	"23.3"	""	"32.9"	""	"36.6"	"39.4"	""	"1019"	"32"	"37.000"	"30.000"	"0.0299325825113921"	"17"	"0.0001991"	"0.002377"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"660.37854"	"1319.74980"	"1319.75207"	"-1.72"	"-0.00113"	"7/86"	"7"	"86"	"659940.064758301"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"69.2441"	"23131"	"23131"	"23108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.0"	""	"51.7"	""	"49.8"	""	"75.7"	""	"103.4"	"111.2"	""	"1019"	"36"	"37.000"	"30.000"	"0.0115649614203481"	"30"	"0.001872"	"0.0154"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLK.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"660.37860"	"1319.74993"	"1319.75207"	"-1.62"	"-0.00107"	"8/86"	"8"	"86"	"487110.439025879"	"HCD"	"MS2"	"32.77797"	"20.5"	"100.000"	"86.1703"	"29985"	"29985"	"29972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"21.5"	""	"23.0"	""	"41.4"	""	"43.0"	"44.4"	""	"1019"	"69"	"37.000"	"30.000"	"6.25380288275209E-06"	"24"	"0"	"7.029E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"660.37872"	"1319.75017"	"1319.75207"	"-1.44"	"-0.00095"	"6/86"	"6"	"86"	"343136.077880859"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"70.3452"	"23579"	"23579"	"23552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"26.6"	""	"38.0"	""	"44.5"	""	"58.3"	"61.2"	""	"1019"	"26"	"37.000"	"30.000"	"0.134941082062012"	"15"	"0.001348"	"0.01069"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"660.37878"	"1319.75029"	"1319.75207"	"-1.35"	"-0.00089"	"7/86"	"7"	"86"	"374147.475769043"	"HCD"	"MS2"	"35.0645"	"27.2"	"100.000"	"69.5662"	"23262"	"23262"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.8"	""	"29.7"	""	"34.3"	""	"48.2"	""	"61.0"	"55.1"	""	"1009"	"42"	"37.000"	"30.000"	"0.00285667721319799"	"23"	"0.0001686"	"0.001336"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"660.37897"	"1319.75066"	"1319.75207"	"-1.07"	"-0.00070"	"7/86"	"7"	"86"	"586693.111999512"	"HCD"	"MS2"	"51.24554"	"41.4"	"100.000"	"69.3101"	"23192"	"23192"	"23167"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"42.2"	""	"48.4"	""	"80.6"	""	"92.2"	"84.6"	""	"1006"	"44"	"37.000"	"30.000"	"0.00222621951298401"	"22"	"0.0001991"	"0.003527"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"660.37927"	"1319.75127"	"1319.75207"	"-0.61"	"-0.00040"	"7/86"	"7"	"86"	"400701.654296875"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"69.6370"	"23325"	"23325"	"23299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"33.5"	""	"35.5"	""	"52.6"	"0.8"	"58.8"	"56.4"	""	"1024"	"48"	"37.000"	"30.000"	"0.00081146531454009"	"24"	"0.0001991"	"0.002659"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"660.37927"	"1319.75127"	"1319.75207"	"-0.61"	"-0.00040"	"8/86"	"8"	"86"	"7294293.26782227"	"HCD"	"MS2"	"0"	"244.5"	"100.000"	"68.2630"	"22733"	"22733"	"22716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.2"	""	"270.6"	""	"270.8"	""	"491.2"	"1.8"	"545.3"	"494.0"	""	"1024"	"59"	"37.000"	"30.000"	"6.70301144575697E-05"	"27"	"0.0001991"	"0.005739"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLK.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"660.37933"	"1319.75139"	"1319.75207"	"-0.51"	"-0.00034"	"8/86"	"8"	"86"	"352331.765014648"	"HCD"	"MS2"	"36.7554"	"20.2"	"100.000"	"86.4022"	"30110"	"30110"	"30094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"22.6"	""	"22.2"	""	"38.4"	""	"41.3"	"46.1"	""	"1024"	"43"	"37.000"	"30.000"	"0.00235651365673654"	"18"	"9.9E-05"	"0.0007309"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"660.37933"	"1319.75139"	"1319.75207"	"-0.51"	"-0.00034"	"7/86"	"7"	"86"	"2193892.75805664"	"HCD"	"MS2"	"0"	"83.7"	"100.000"	"68.6142"	"22908"	"22908"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.6"	""	"80.6"	""	"112.1"	""	"155.6"	"1.0"	"186.1"	"172.8"	""	"1024"	"47"	"37.000"	"30.000"	"0.001000621801357"	"26"	"0.001261"	"0.00964"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"660.37946"	"1319.75163"	"1319.75207"	"-0.33"	"-0.00022"	"7/86"	"7"	"86"	"2151379.21234131"	"HCD"	"MS2"	"32.04357"	"110.7"	"100.000"	"67.9516"	"22606"	"22606"	"22591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.1"	""	"143.0"	""	"145.7"	""	"204.8"	""	"221.3"	"206.7"	""	"1020"	"42"	"37.000"	"30.000"	"0.00315188364070592"	"24"	"0.0001991"	"0.005253"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"660.37952"	"1319.75176"	"1319.75207"	"-0.24"	"-0.00016"	"6/86"	"6"	"86"	"285669.720275879"	"HCD"	"MS2"	"23.9416"	"22.6"	"100.000"	"70.5820"	"23708"	"23708"	"23689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"27.5"	""	"30.2"	""	"33.4"	""	"47.5"	"50.1"	""	"1020"	"30"	"37.000"	"30.000"	"0.0456636030430293"	"18"	"0.001261"	"0.01029"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"660.37952"	"1319.75176"	"1319.75207"	"-0.24"	"-0.00016"	"7/86"	"7"	"86"	"1871151.79107666"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"68.5763"	"22861"	"22861"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.4"	""	"82.0"	""	"93.7"	""	"148.9"	""	"169.6"	"157.3"	""	"1020"	"47"	"37.000"	"30.000"	"0.000974025161868782"	"27"	"0.0001991"	"0.003502"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"660.37970"	"1319.75212"	"1319.75207"	"0.04"	"0.00003"	"7/86"	"7"	"86"	"702743.068054199"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"68.9347"	"23039"	"23039"	"23016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.7"	""	"50.7"	""	"49.0"	""	"81.2"	""	"89.3"	"87.5"	""	"957"	"48"	"36.000"	"29.000"	"0.000777825079626607"	"24"	"0.0001991"	"0.00267"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"660.37970"	"1319.75212"	"1319.75207"	"0.04"	"0.00003"	"7/86"	"7"	"86"	"2242899.08532715"	"HCD"	"MS2"	"35.14439"	"112.3"	"100.000"	"68.0085"	"22661"	"22661"	"22641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.3"	""	"130.8"	""	"141.6"	""	"205.6"	"1.6"	"241.4"	"220.8"	""	"957"	"46"	"36.000"	"29.000"	"0.00108613033162641"	"22"	"0.0001991"	"0.003308"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vINAFNDGLK.[H]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"660.37982"	"1319.75237"	"1319.75207"	"0.23"	"0.00015"	"8/86"	"8"	"86"	"384886.139221191"	"HCD"	"MS2"	"59.61182"	"21.6"	"100.000"	"86.0357"	"29963"	"29963"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"24.2"	""	"29.2"	""	"32.1"	"0.5"	"42.1"	"47.5"	""	"961"	"38"	"36.000"	"29.000"	"0.00747641485986239"	"18"	"0.0001686"	"0.001123"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"660.38013"	"1319.75298"	"1319.75207"	"0.69"	"0.00046"	"6/86"	"6"	"86"	"256055.064453125"	"HCD"	"MS2"	"8.681119"	"22.3"	"100.000"	"70.6564"	"23705"	"23705"	"23684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"29.1"	""	"23.6"	""	"34.7"	""	"44.6"	"50.2"	""	"960"	"29"	"36.000"	"29.000"	"0.0640090287438395"	"14"	"0.001488"	"0.01226"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"660.38031"	"1319.75334"	"1319.75207"	"0.97"	"0.00064"	"6/86"	"6"	"86"	"7073551.87084961"	"HCD"	"MS2"	"0.8861262"	"242.4"	"100.000"	"68.2962"	"22779"	"22779"	"22762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"240.9"	""	"279.6"	""	"287.9"	""	"484.4"	""	"534.3"	"477.8"	""	"969"	"47"	"36.000"	"29.000"	"0.00103823049624267"	"18"	"0.002166"	"0.01979"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFNDGLk.[H]"	"K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"660.38037"	"1319.75347"	"1319.75207"	"1.06"	"0.00070"	"7/86"	"7"	"86"	"697682.363830566"	"HCD"	"MS2"	"3.64257"	"41.5"	"100.000"	"68.9080"	"22994"	"22994"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.6"	""	"48.6"	""	"49.0"	""	"78.0"	"1.2"	"88.9"	"86.1"	""	"967"	"46"	"36.000"	"29.000"	"0.00120336251338954"	"23"	"0.0001991"	"0.004824"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AAESIDQK"	"[K].aAESIDQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.0500"	"0.0000"	"1"	"1"	"1"	"660.38098"	"1319.75469"	"1319.75710"	"-1.83"	"-0.00121"	"7/64"	"7"	"64"	"549130.508056641"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"37.3915"	"10241"	"10241"	"10213"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.8"	""	"49.4"	""	"58.8"	""	"81.9"	"0.9"	"83.0"	"100.2"	""	"980"	"20"	"36.000"	"29.000"	"0.514275790039638"	"22"	"0.004959"	"0.06309"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQADK"	"[K].sLEAQADk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P58775"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"P58775"	"Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"660.38165"	"1319.75603"	"1319.75710"	"-0.81"	"-0.00054"	"7/74"	"7"	"74"	"1480459.86401367"	"HCD"	"MS2"	"20.47109"	"126.2"	"100.000"	"38.8635"	"10839"	"10839"	"10814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.8"	""	"113.7"	""	"127.0"	""	"197.6"	""	"230.0"	"398.7"	""	"986"	"11"	"36.000"	"29.000"	"4.21547889452149"	"20"	"0.002525"	"0.02478"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAESIDQK"	"[K].aAESIDQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"660.38232"	"1319.75737"	"1319.75710"	"0.20"	"0.00014"	"6/64"	"6"	"64"	"663936.645751953"	"HCD"	"MS2"	"16.45881"	"58.6"	"100.000"	"37.5335"	"10262"	"10262"	"10233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.5"	""	"68.3"	""	"61.2"	""	"110.2"	"1.3"	"106.5"	"117.2"	""	"955"	"29"	"36.000"	"29.000"	"0.0562306852356186"	"24"	"0.0001991"	"0.005288"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVQFK"	"[K].eNPVQFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"660.38885"	"1319.77043"	"1319.77236"	"-1.46"	"-0.00096"	"12/58"	"12"	"58"	"711449.506225586"	"HCD"	"MS2"	"0"	"62.2"	"100.000"	"58.9613"	"18959"	"18959"	"18933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.6"	""	"76.7"	""	"79.7"	""	"121.4"	""	"110.3"	"115.9"	""	"941"	"34"	"36.000"	"29.000"	"0.0167324535386708"	"23"	"0.001049"	"0.008641"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVQFK"	"[K].eNPVQFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"660.38922"	"1319.77117"	"1319.77236"	"-0.90"	"-0.00060"	"12/58"	"12"	"58"	"2027151.7008667"	"HCD"	"MS2"	"0"	"160.2"	"100.000"	"59.0165"	"19016"	"19016"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.6"	""	"191.0"	""	"198.0"	""	"292.0"	""	"290.6"	"314.0"	""	"926"	"37"	"36.000"	"29.000"	"0.00945324668381992"	"23"	"0.001827"	"0.01531"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVQFK"	"[K].eNPVQFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"660.38947"	"1319.77165"	"1319.77236"	"-0.53"	"-0.00035"	"6/58"	"6"	"58"	"1857015.96844482"	"HCD"	"MS2"	"4.763649"	"152.8"	"100.000"	"59.3435"	"19115"	"19115"	"19098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.3"	""	"184.0"	""	"183.3"	""	"287.8"	""	"273.5"	"315.2"	""	"926"	"30"	"36.000"	"29.000"	"0.0449346114834661"	"23"	"0.002328"	"0.02214"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVQFK"	"[K].eNPVQFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"660.38965"	"1319.77202"	"1319.77236"	"-0.26"	"-0.00017"	"6/58"	"6"	"58"	"653829.844787598"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"58.7241"	"18898"	"18898"	"18871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.4"	""	"70.3"	""	"67.8"	""	"107.2"	""	"97.4"	"113.8"	""	"921"	"33"	"36.000"	"29.000"	"0.0238357946113236"	"23"	"0.0009352"	"0.008122"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIDTSTIVR"	"[K].sVIDTSTIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"660.39020"	"1319.77312"	"1319.77320"	"-0.06"	"-0.00004"	"8/84"	"8"	"84"	"567533.03692627"	"HCD"	"MS2"	"53.92685"	"37.7"	"100.000"	"69.7574"	"23340"	"23340"	"23314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.1"	""	"39.7"	""	"44.9"	""	"72.1"	"0.9"	"87.8"	"71.5"	""	"891"	"40"	"36.000"	"29.000"	"0.00480670764753389"	""	"0"	"0.0001595"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIDTSTIVR"	"[K].sVIDTSTIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"P70483"	"Striatin OS=Rattus norvegicus OX=10116 GN=Strn PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"660.39264"	"1319.77800"	"1319.77320"	"3.64"	"0.00240"	"7/84"	"7"	"84"	"629183.612731934"	"HCD"	"MS2"	"27.94423"	"39.8"	"100.000"	"69.8905"	"23428"	"23428"	"23404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.1"	""	"43.8"	""	"54.5"	""	"74.0"	"0.5"	"82.6"	"76.2"	""	"885"	"36"	"36.000"	"29.000"	"0.0104210930812398"	""	"9.9E-05"	"0.001004"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTELEK"	"[K].qLTELEk.[E]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"1"	"1"	"O08656"	"Homeobox protein Hox-A1 OS=Rattus norvegicus OX=10116 GN=Hoxa1 PE=2 SV=1"	"O08656"	"Homeobox protein Hox-A1 OS=Rattus norvegicus OX=10116 GN=Hoxa1 PE=2 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"7"	"660.39459"	"1319.78191"	"1319.78225"	"-0.26"	"-0.00017"	"4/66"	"4"	"66"	"1225736.48291016"	"HCD"	"MS2"	"23.64579"	"104.1"	"100.000"	"67.3011"	"22374"	"22374"	"22352"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.5"	""	"122.7"	""	"119.7"	""	"200.6"	""	"219.2"	"216.6"	""	"852"	"21"	"36.000"	"29.000"	"0.352703361741454"	""	"0.003818"	"0.04175"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"660.39899"	"1319.79070"	"1319.79349"	"-2.11"	"-0.00139"	"8/76"	"8"	"76"	"798040.083007813"	"HCD"	"MS2"	"33.25994"	"64.4"	"100.000"	"32.3435"	"8160"	"8160"	"8134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.2"	""	"87.3"	""	"66.3"	""	"121.5"	""	"120.3"	"121.9"	""	"793"	"37"	"35.000"	"28.000"	"0.00759002474270861"	"24"	"0"	"0.0002371"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"660.39960"	"1319.79192"	"1319.79349"	"-1.19"	"-0.00078"	"7/76"	"7"	"76"	"2284222.90582275"	"HCD"	"MS2"	"0"	"156.1"	"100.000"	"32.8928"	"8381"	"8381"	"8361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.2"	""	"170.0"	""	"179.9"	""	"324.8"	"0.3"	"318.6"	"300.8"	""	"787"	"40"	"35.000"	"28.000"	"0.00427508482893315"	"26"	"0.001488"	"0.01259"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVVTDGVK"	"[K].sGVVTDGVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"660.39972"	"1319.79216"	"1319.79349"	"-1.00"	"-0.00066"	"8/74"	"8"	"74"	"2744357.70977783"	"HCD"	"MS2"	"13.90335"	"195.9"	"100.000"	"44.1713"	"12991"	"12991"	"12969"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"341.1"	""	"283.2"	""	"277.7"	""	"296.7"	""	"320.6"	"336.7"	""	"787"	"48"	"35.000"	"28.000"	"0.000669799373053414"	""	"0"	"0.0001308"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVVTDGVK"	"[K].sGVVTDGVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"660.39972"	"1319.79216"	"1319.79349"	"-1.00"	"-0.00066"	"13/74"	"13"	"74"	"2569325.39923096"	"HCD"	"MS2"	"15.00972"	"202.4"	"100.000"	"44.3726"	"13038"	"13038"	"13009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.0"	""	"311.0"	""	"303.5"	""	"317.4"	""	"307.9"	"320.6"	""	"787"	"47"	"35.000"	"28.000"	"0.000754996149453759"	""	"0"	"6.344E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAVSEIK"	"[K].tNAVSEIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"660.39978"	"1319.79228"	"1319.79349"	"-0.91"	"-0.00060"	"12/78"	"12"	"78"	"1157753.53955078"	"HCD"	"MS2"	"18.55368"	"93.2"	"100.000"	"47.6115"	"14385"	"14385"	"14363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.4"	""	"96.5"	""	"102.2"	""	"191.5"	"3.1"	"210.9"	"174.8"	""	"787"	"34"	"35.000"	"28.000"	"0.0141887696029016"	"22"	"9.9E-05"	"0.0008234"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVVTDGVK"	"[K].sGVVTDGVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"660.39984"	"1319.79241"	"1319.79349"	"-0.82"	"-0.00054"	"8/74"	"8"	"74"	"3255795.25909424"	"HCD"	"MS2"	"0"	"227.4"	"100.000"	"44.6730"	"13159"	"13159"	"13143"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"378.6"	""	"328.1"	""	"352.3"	""	"326.6"	""	"377.6"	"388.3"	""	"787"	"45"	"35.000"	"28.000"	"0.00112965215902672"	""	"0"	"8.325E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"660.39996"	"1319.79265"	"1319.79349"	"-0.63"	"-0.00042"	"7/76"	"7"	"76"	"485385.277160645"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"32.1759"	"8129"	"8129"	"8106"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"44.1"	""	"51.5"	""	"79.2"	""	"81.2"	"86.9"	""	"787"	"32"	"35.000"	"28.000"	"0.0235474962656236"	"23"	"0.0001991"	"0.002829"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"660.39996"	"1319.79265"	"1319.79349"	"-0.63"	"-0.00042"	"7/76"	"7"	"76"	"21290879.3543701"	"HCD"	"MS2"	"0"	"687.7"	"53.901"	"32.6007"	"8263"	"8263"	"8256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"761.8"	""	"686.9"	""	"757.2"	""	"1565.8"	""	"1467.8"	"1299.4"	""	"787"	"42"	"35.000"	"28.000"	"0.00278576666155158"	"27"	"0.002588"	"0.02726"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"660.39996"	"1319.79265"	"1319.79349"	"-0.63"	"-0.00042"	"7/76"	"7"	"76"	"16718272.6907959"	"HCD"	"MS2"	"0"	"814.9"	"85.300"	"32.4585"	"8242"	"8242"	"8236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"910.9"	""	"824.0"	""	"854.2"	""	"1891.1"	""	"1712.9"	"1549.5"	""	"787"	"43"	"35.000"	"28.000"	"0.00195409078490707"	"28"	"0.002834"	"0.03038"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"440.60254"	"1319.79306"	"1319.79349"	"-0.32"	"-0.00014"	"9/76"	"9"	"76"	"7654357.71789551"	"HCD"	"MS2"	"36.34768"	"336.9"	"100.000"	"32.5707"	"8251"	"8251"	"8239"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"384.7"	""	"345.4"	""	"389.1"	""	"711.2"	""	"714.0"	"662.6"	""	"755"	"27"	"35.000"	"28.000"	"0.0768983384333909"	"17"	"0.0001991"	"0.003236"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVVTDGVK"	"[K].sGVVTDGVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"660.40027"	"1319.79326"	"1319.79349"	"-0.17"	"-0.00011"	"13/74"	"13"	"74"	"3295145.2612915"	"HCD"	"MS2"	"0"	"252.6"	"100.000"	"44.4625"	"13108"	"13108"	"13100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"416.6"	""	"338.7"	""	"386.2"	""	"373.5"	"2.3"	"423.5"	"448.3"	""	"755"	"52"	"35.000"	"28.000"	"0.000259966241869964"	""	"0"	"0.0001679"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"660.40045"	"1319.79363"	"1319.79349"	"0.11"	"0.00007"	"8/76"	"8"	"76"	"2772359.47674561"	"HCD"	"MS2"	"0"	"181.8"	"100.000"	"32.7663"	"8367"	"8367"	"8347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.8"	""	"189.9"	""	"214.0"	""	"365.4"	""	"386.3"	"365.0"	""	"764"	"45"	"35.000"	"28.000"	"0.00132758813671305"	"23"	"0.001049"	"0.008796"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAVSEIK"	"[K].tNAVSEIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"660.40057"	"1319.79387"	"1319.79349"	"0.29"	"0.00019"	"7/78"	"7"	"78"	"1072432.70440674"	"HCD"	"MS2"	"46.08871"	"89.5"	"100.000"	"47.9267"	"14476"	"14476"	"14453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.4"	""	"86.6"	""	"88.1"	""	"196.8"	"4.9"	"194.1"	"169.5"	""	"757"	"33"	"35.000"	"28.000"	"0.0174207113100543"	"25"	"0.0001686"	"0.001267"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"440.60281"	"1319.79389"	"1319.79349"	"0.30"	"0.00013"	"9/76"	"9"	"76"	"8161031.9418335"	"HCD"	"MS2"	"33.85389"	"329.8"	"100.000"	"32.4975"	"8258"	"8258"	"8241"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"376.5"	""	"355.1"	""	"365.4"	""	"725.4"	""	"672.9"	"640.1"	""	"757"	"30"	"35.000"	"28.000"	"0.0402778132397904"	"22"	"0.0001991"	"0.001999"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"660.40070"	"1319.79411"	"1319.79349"	"0.48"	"0.00031"	"8/76"	"8"	"76"	"402689.341674805"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"33.1655"	"8530"	"8530"	"8506"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.6"	""	"38.3"	""	"44.5"	""	"71.7"	"2.1"	"67.2"	"70.6"	""	"757"	"25"	"35.000"	"28.000"	"0.112477559301284"	"20"	"0.0005778"	"0.007132"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTPASSAK"	"[K].tVTPASSAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"660.40137"	"1319.79546"	"1319.79349"	"1.49"	"0.00099"	"7/76"	"7"	"76"	"330064.480224609"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"33.1402"	"8520"	"8520"	"8490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"42.2"	""	"36.2"	""	"55.1"	"0.5"	"50.6"	"56.5"	""	"685"	"40"	"35.000"	"28.000"	"0.00345669113481264"	"18"	"0.001049"	"0.008579"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"660.40399"	"1319.80071"	"1319.80088"	"-0.13"	"-0.00009"	"12/50"	"12"	"50"	"1319695.75567627"	"HCD"	"MS2"	"32.25562"	"100.3"	"100.000"	"97.6245"	"34633"	"34633"	"34615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.1"	""	"155.6"	""	"123.5"	""	"158.0"	""	"218.5"	"168.9"	""	"668"	"34"	"35.000"	"28.000"	"0.0128749771460368"	"25"	"0.0005161"	"0.006973"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"660.40411"	"1319.80095"	"1319.80088"	"0.05"	"0.00004"	"12/50"	"12"	"50"	"1137727.94842529"	"HCD"	"MS2"	"9.505879"	"81.5"	"100.000"	"97.9339"	"34759"	"34759"	"34742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.0"	""	"119.4"	""	"104.1"	""	"106.0"	""	"171.7"	"156.7"	""	"655"	"35"	"35.000"	"28.000"	"0.00970982280069223"	"26"	"0.0001991"	"0.00437"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"660.40442"	"1319.80156"	"1319.80088"	"0.52"	"0.00034"	"12/50"	"12"	"50"	"1144985.94256592"	"HCD"	"MS2"	"9.429968"	"87.7"	"100.000"	"97.8876"	"34709"	"34709"	"34691"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.6"	""	"135.4"	""	"95.6"	""	"125.9"	""	"193.6"	"163.6"	""	"655"	"35"	"35.000"	"28.000"	"0.00925148191784894"	"26"	"0.0005778"	"0.007185"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"660.40454"	"1319.80181"	"1319.80088"	"0.70"	"0.00046"	"12/50"	"12"	"50"	"1691499.08795166"	"HCD"	"MS2"	"32.66271"	"126.4"	"100.000"	"97.5898"	"34588"	"34588"	"34567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"185.8"	""	"201.5"	""	"129.1"	""	"177.3"	"0.2"	"289.8"	"215.9"	""	"655"	"36"	"35.000"	"28.000"	"0.00908262334273478"	"26"	"0.001348"	"0.01087"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"660.85486"	"1320.70244"	"1320.70307"	"-0.48"	"-0.00031"	"7/76"	"7"	"76"	"821151.184448242"	"HCD"	"MS2"	"12.08356"	"39.7"	"100.000"	"102.5574"	"36600"	"36600"	"36577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.9"	""	"65.0"	""	"58.0"	""	"52.4"	""	"74.1"	"64.9"	""	"863"	"64"	"36.000"	"29.000"	"1.8364571526721E-05"	""	"0"	"3.629E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"660.85510"	"1320.70293"	"1320.70307"	"-0.11"	"-0.00007"	"6/76"	"6"	"76"	"219611.843688965"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"103.1550"	"36843"	"36843"	"36823"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"17.5"	""	"26.6"	""	"24.2"	""	"31.3"	"27.6"	""	"851"	"30"	"36.000"	"29.000"	"0.0451751459588058"	"27"	"0.0001991"	"0.005513"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"660.85510"	"1320.70293"	"1320.70307"	"-0.11"	"-0.00007"	"7/76"	"7"	"76"	"536661.477233887"	"HCD"	"MS2"	"13.45292"	"27.8"	"100.000"	"102.7494"	"36700"	"36700"	"36683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.1"	""	"34.4"	""	"44.1"	""	"41.0"	"0.7"	"46.7"	"54.3"	""	"851"	"68"	"36.000"	"29.000"	"6.38115897506261E-06"	""	"0"	"0.0001179"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7536"	"0.0000"	"1"	"1"	"1"	"660.85529"	"1320.70329"	"1320.70307"	"0.17"	"0.00011"	"7/76"	"7"	"76"	"3918320.61932373"	"HCD"	"MS2"	"0.8527885"	"163.6"	"100.000"	"102.8389"	"36715"	"36715"	"36699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"273.4"	""	"260.4"	""	"260.3"	""	"175.7"	""	"272.3"	"310.4"	""	"858"	"69"	"36.000"	"29.000"	"6.04584894522983E-06"	""	"0"	"6.928E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDMLDIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"660.85559"	"1320.70391"	"1320.70307"	"0.63"	"0.00042"	"7/76"	"7"	"76"	"3624128.14038086"	"HCD"	"MS2"	"0.3455057"	"149.7"	"100.000"	"103.0242"	"36811"	"36811"	"36801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.1"	""	"219.3"	""	"228.0"	""	"169.4"	""	"270.7"	"284.5"	""	"858"	"68"	"36.000"	"29.000"	"6.07375531601589E-06"	""	"0"	"1.467E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDLSLPVER"	"[K].yDLSLPVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"P84850"	"D-2-hydroxyglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=D2hgdh PE=3 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"660.87048"	"1320.73369"	"1320.73608"	"-1.81"	"-0.00120"	"7/76"	"7"	"76"	"867582.167358398"	"HCD"	"MS2"	"16.47793"	"46.6"	"100.000"	"94.1591"	"33198"	"33198"	"33179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.2"	""	"63.0"	""	"60.7"	""	"73.1"	"0.0"	"85.6"	"90.4"	""	"1036"	"15"	"37.000"	"30.000"	"1.60446319699419"	"19"	"0.002588"	"0.02623"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VInAFNDGLk.[H]"	"N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"660.87128"	"1320.73528"	"1320.73608"	"-0.61"	"-0.00040"	"5/86"	"5"	"86"	"222211.692932129"	"HCD"	"MS2"	"3.023545"	"13.4"	"100.000"	"113.3849"	"40875"	"40875"	"40857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"13.8"	""	"18.7"	""	"23.1"	""	"29.2"	"27.1"	""	"1034"	"28"	"37.000"	"30.000"	"0.0877991968322722"	"22"	"0.006237"	"0.07598"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFnDGLk.[H]"	"N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5192"	"0.0000"	"1"	"1"	"1"	"660.87183"	"1320.73638"	"1320.73608"	"0.22"	"0.00015"	"7/86"	"7"	"86"	"847702.495788574"	"HCD"	"MS2"	"2.587576"	"46.1"	"100.000"	"75.5296"	"25682"	"25682"	"25661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"52.9"	""	"60.1"	""	"77.1"	"1.6"	"96.9"	"95.9"	""	"1047"	"52"	"37.000"	"30.000"	"0.000301937243585843"	"28"	"0.0001686"	"0.001816"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFnDGLk.[H]"	"N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"660.87189"	"1320.73650"	"1320.73608"	"0.31"	"0.00021"	"7/86"	"7"	"86"	"918574.829956055"	"HCD"	"MS2"	"5.947508"	"47.4"	"100.000"	"75.6208"	"25750"	"25750"	"25729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"48.0"	""	"61.2"	""	"95.1"	""	"105.3"	"88.1"	""	"1047"	"48"	"37.000"	"30.000"	"0.0007497503652697"	"27"	"0.001615"	"0.01486"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFnDGLk.[H]"	"N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"660.87201"	"1320.73674"	"1320.73608"	"0.50"	"0.00033"	"7/86"	"7"	"86"	"1800229.01806641"	"HCD"	"MS2"	"3.02324"	"85.1"	"100.000"	"75.3097"	"25624"	"25624"	"25607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.0"	"2.8"	"94.3"	""	"111.5"	""	"155.4"	""	"190.9"	"163.9"	""	"1047"	"47"	"37.000"	"30.000"	"0.00104211749295979"	"23"	"0.0009964"	"0.008442"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].VINAFnDGLk.[H]"	"N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"660.87201"	"1320.73674"	"1320.73608"	"0.50"	"0.00033"	"7/86"	"7"	"86"	"1950993.60076904"	"HCD"	"MS2"	"1.500635"	"94.1"	"100.000"	"75.2209"	"25556"	"25556"	"25537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.7"	""	"111.5"	""	"127.8"	""	"162.0"	""	"204.8"	"185.7"	""	"1047"	"47"	"37.000"	"30.000"	"0.00106393889522511"	"25"	"0.0009352"	"0.00813"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGIETGEK"	"[K].eGIETGEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"660.87396"	"1320.74065"	"1320.74112"	"-0.35"	"-0.00023"	"6/68"	"6"	"68"	"465509.418518066"	"HCD"	"MS2"	"0"	"48.2"	"100.000"	"38.0268"	"10497"	"10497"	"10471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"41.0"	""	"39.1"	""	"114.7"	""	"108.1"	"114.5"	""	"1043"	"22"	"37.000"	"30.000"	"0.306375697344279"	"26"	"0.004158"	"0.04503"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSQSALPYR"	"[K].gLSQSALPYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"660.87683"	"1320.74639"	"1320.74732"	"-0.70"	"-0.00047"	"8/88"	"8"	"88"	"1236430.13336182"	"HCD"	"MS2"	"23.64704"	"81.6"	"100.000"	"59.3478"	"19151"	"19151"	"19134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.8"	""	"120.9"	""	"131.8"	""	"139.3"	""	"131.7"	"128.4"	""	"1042"	"27"	"37.000"	"30.000"	"0.116637371319411"	"21"	"9.9E-05"	"0.0009599"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSQSALPYR"	"[K].gLSQSALPYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"660.87701"	"1320.74675"	"1320.74732"	"-0.43"	"-0.00028"	"7/88"	"7"	"88"	"1314013.83398438"	"HCD"	"MS2"	"26.32994"	"83.3"	"100.000"	"59.5481"	"19198"	"19198"	"19173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.7"	""	"136.7"	""	"142.8"	""	"129.7"	""	"138.0"	"117.8"	""	"1037"	"27"	"37.000"	"30.000"	"0.0950055027999473"	"19"	"9.9E-05"	"0.0008655"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFTVDQIR"	"[M].vNFTVDQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"660.87714"	"1320.74700"	"1320.74732"	"-0.24"	"-0.00016"	"7/82"	"7"	"82"	"2620063.87945557"	"HCD"	"MS2"	"8.01758"	"127.4"	"100.000"	"85.2735"	"29625"	"29625"	"29607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.9"	"2.1"	"161.3"	""	"188.9"	""	"197.6"	""	"234.5"	"222.8"	""	"1034"	"45"	"37.000"	"30.000"	"0.00157213755827464"	"29"	"0"	"0.0001482"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFTVDQIR"	"[M].vNFTVDQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"660.87720"	"1320.74712"	"1320.74732"	"-0.15"	"-0.00010"	"7/82"	"7"	"82"	"1639958.0324707"	"HCD"	"MS2"	"1.737315"	"80.8"	"100.000"	"85.5424"	"29764"	"29764"	"29753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.1"	""	"98.2"	""	"118.6"	""	"108.1"	""	"151.1"	"167.1"	""	"1034"	"42"	"37.000"	"30.000"	"0.00292745712432777"	"21"	"0"	"0.0002881"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFTVDQIR"	"[M].vNFTVDQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"660.87732"	"1320.74736"	"1320.74732"	"0.03"	"0.00002"	"7/82"	"7"	"82"	"2838453.01690674"	"HCD"	"MS2"	"8.280609"	"135.4"	"100.000"	"85.2751"	"29655"	"29655"	"29637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.7"	"2.9"	"173.3"	""	"197.1"	""	"201.4"	"0.1"	"246.8"	"234.8"	""	"998"	"49"	"36.000"	"29.000"	"0.000574249394083273"	""	"0"	"0.0001234"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNFTVDQIR"	"[M].vNFTVDQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"660.87756"	"1320.74785"	"1320.74732"	"0.40"	"0.00027"	"7/82"	"7"	"82"	"1380325.79095459"	"HCD"	"MS2"	"3.95356"	"68.9"	"100.000"	"85.5825"	"29750"	"29750"	"29734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.0"	""	"82.7"	""	"90.6"	""	"91.5"	""	"132.8"	"158.8"	""	"1003"	"39"	"37.000"	"30.000"	"0.00569207924059666"	"22"	"0"	"0.0001859"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIDMK"	"[R].dQLIDMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.1111"	"0.0000"	"1"	"1"	"1"	"660.88312"	"1320.75896"	"1320.75974"	"-0.59"	"-0.00039"	"6/66"	"6"	"66"	"1986256.82952881"	"HCD"	"MS2"	"40.22878"	"119.2"	"100.000"	"79.1861"	"27163"	"27163"	"27144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.5"	""	"138.1"	""	"130.9"	""	"256.7"	""	"255.0"	"212.5"	""	"999"	"9"	"36.000"	"29.000"	"6.80041618891742"	"21"	"0.006033"	"0.07413"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIDMK"	"[R].dQLIDMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"660.88318"	"1320.75908"	"1320.75974"	"-0.50"	"-0.00033"	"12/66"	"12"	"66"	"5180837.13659668"	"HCD"	"MS2"	"0.8591138"	"397.9"	"100.000"	"79.0110"	"27119"	"27119"	"27102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"579.5"	""	"456.3"	""	"340.9"	""	"870.5"	""	"857.8"	"678.2"	""	"999"	"36"	"36.000"	"29.000"	"0.011709422932523"	""	"0.002189"	"0.02139"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIDMK"	"[R].dQLIDMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"660.88330"	"1320.75932"	"1320.75974"	"-0.32"	"-0.00021"	"12/66"	"12"	"66"	"5228006.99975586"	"HCD"	"MS2"	"0"	"396.8"	"100.000"	"78.8844"	"27041"	"27041"	"27024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"541.8"	""	"457.2"	""	"352.6"	""	"851.2"	"1.1"	"868.2"	"695.2"	""	"986"	"36"	"36.000"	"29.000"	"0.011690872368912"	""	"0.002462"	"0.02305"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIDMK"	"[R].dQLIDMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"660.88367"	"1320.76006"	"1320.75974"	"0.24"	"0.00016"	"6/66"	"6"	"66"	"1460112.59216309"	"HCD"	"MS2"	"0"	"122.9"	"100.000"	"78.5959"	"26923"	"26923"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.3"	""	"160.5"	""	"101.7"	""	"288.5"	""	"245.2"	"196.8"	""	"985"	"33"	"36.000"	"29.000"	"0.0232491047822319"	""	"0.001103"	"0.009064"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIDMK"	"[R].dQLIDMk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"660.88379"	"1320.76030"	"1320.75974"	"0.42"	"0.00028"	"12/66"	"12"	"66"	"1372969.92633057"	"HCD"	"MS2"	"9.053795"	"118.0"	"100.000"	"78.6973"	"26991"	"26991"	"26967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.2"	""	"149.5"	""	"100.1"	""	"271.6"	"0.3"	"231.0"	"207.6"	""	"985"	"36"	"36.000"	"29.000"	"0.0123425880711832"	""	"0.001103"	"0.0092"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLDSTK"	"[R].aEVLDSTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"660.89124"	"1320.77519"	"1320.77750"	"-1.75"	"-0.00115"	"9/66"	"9"	"66"	"360593.002746582"	"HCD"	"MS2"	"26.72371"	"35.6"	"100.000"	"51.3078"	"15850"	"15850"	"15821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.1"	""	"41.6"	""	"56.0"	""	"44.2"	""	"68.5"	"71.1"	""	"882"	"16"	"36.000"	"29.000"	"0.996411174667451"	"17"	"0.002525"	"0.02387"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLDSTK"	"[R].aEVLDSTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"660.89130"	"1320.77532"	"1320.77750"	"-1.66"	"-0.00109"	"12/66"	"12"	"66"	"1124646.30871582"	"HCD"	"MS2"	"27.2413"	"92.9"	"100.000"	"50.9613"	"15712"	"15712"	"15685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.5"	""	"125.2"	""	"123.7"	""	"131.3"	""	"199.4"	"193.8"	""	"882"	"40"	"36.000"	"29.000"	"0.00439985728145746"	"27"	"0"	"0.0003898"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITISGDK"	"[R].eITISGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"660.89166"	"1320.77605"	"1320.77750"	"-1.10"	"-0.00073"	"6/68"	"6"	"68"	"591707.950439453"	"HCD"	"MS2"	"0"	"54.4"	"100.000"	"58.3260"	"18700"	"18700"	"18670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.8"	""	"72.2"	""	"72.0"	""	"92.4"	"0.3"	"103.8"	"94.9"	""	"876"	"21"	"36.000"	"29.000"	"0.327698241223886"	"23"	"0.001951"	"0.01679"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLDSTK"	"[R].aEVLDSTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"660.89172"	"1320.77617"	"1320.77750"	"-1.01"	"-0.00067"	"12/66"	"12"	"66"	"967747.643554688"	"HCD"	"MS2"	"15.9017"	"82.4"	"100.000"	"50.6150"	"15605"	"15605"	"15583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.8"	""	"118.9"	""	"99.9"	""	"130.4"	""	"162.6"	"177.8"	""	"876"	"40"	"36.000"	"29.000"	"0.00436992627954279"	"27"	"9.9E-05"	"0.0007066"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVDLTK"	"[R].eTGVDLTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"660.89191"	"1320.77654"	"1320.77750"	"-0.73"	"-0.00048"	"7/68"	"7"	"68"	"1513367.57885742"	"HCD"	"MS2"	"7.924904"	"126.5"	"100.000"	"53.9136"	"16911"	"16911"	"16889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.2"	""	"154.8"	""	"148.5"	""	"222.4"	""	"237.8"	"237.9"	""	"872"	"52"	"36.000"	"29.000"	"0.000290727751377139"	""	"9.9E-05"	"0.0005233"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLDSTK"	"[R].aEVLDSTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"P20788"	"Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrfs1 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"660.89197"	"1320.77666"	"1320.77750"	"-0.64"	"-0.00042"	"11/66"	"11"	"66"	"511425.795288086"	"HCD"	"MS2"	"25.66133"	"48.9"	"100.000"	"50.9209"	"15729"	"15729"	"15702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"65.8"	""	"73.3"	""	"61.8"	"0.5"	"94.9"	"91.8"	""	"872"	"38"	"36.000"	"29.000"	"0.00728595507839468"	"21"	"0.0001686"	"0.001458"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVDLTK"	"[R].eTGVDLTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"660.89209"	"1320.77690"	"1320.77750"	"-0.45"	"-0.00030"	"7/68"	"7"	"68"	"3352716.02087402"	"HCD"	"MS2"	"0"	"254.4"	"100.000"	"54.1948"	"17025"	"17025"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"392.2"	""	"295.2"	""	"338.2"	""	"416.4"	""	"471.2"	"499.2"	""	"872"	"52"	"36.000"	"29.000"	"0.000271322924333753"	""	"0.0001686"	"0.00155"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVDLTK"	"[R].eTGVDLTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"660.89215"	"1320.77703"	"1320.77750"	"-0.36"	"-0.00024"	"7/68"	"7"	"68"	"2628644.47998047"	"HCD"	"MS2"	"0"	"202.2"	"100.000"	"53.9138"	"16944"	"16944"	"16926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"304.5"	""	"212.9"	""	"263.5"	""	"340.3"	""	"379.1"	"419.9"	""	"872"	"50"	"36.000"	"29.000"	"0.00045340519230147"	""	"9.9E-05"	"0.0005518"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITISGDK"	"[R].eITISGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"Q8R2H5"	"Phosphatidylinositol-glycan-specific phospholipase D OS=Rattus norvegicus OX=10116 GN=Gpld1 PE=2 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"660.89227"	"1320.77727"	"1320.77750"	"-0.18"	"-0.00012"	"6/68"	"6"	"68"	"711551.450439453"	"HCD"	"MS2"	"21.82813"	"65.5"	"100.000"	"57.9576"	"18585"	"18585"	"18558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.5"	""	"96.2"	""	"82.4"	""	"96.0"	"3.1"	"116.6"	"119.4"	""	"812"	"21"	"36.000"	"29.000"	"0.310117328132542"	"22"	"0.002286"	"0.02149"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGVDLTK"	"[R].eTGVDLTk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"660.89227"	"1320.77727"	"1320.77750"	"-0.18"	"-0.00012"	"7/68"	"7"	"68"	"1626241.67565918"	"HCD"	"MS2"	"5.481814"	"129.4"	"100.000"	"53.5961"	"16815"	"16815"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.4"	""	"158.6"	""	"157.3"	""	"235.5"	""	"237.9"	"250.4"	""	"812"	"50"	"36.000"	"29.000"	"0.000423180876333681"	""	"0"	"0.0002488"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDIDTAK"	"[R].sLDIDTAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPL2"	"DCN1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Dcun1d5 PE=2 SV=1"	"Q5PPL2"	"DCN1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Dcun1d5 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"660.89270"	"1320.77812"	"1320.77750"	"0.47"	"0.00031"	"7/66"	"7"	"66"	"341806.801757813"	"HCD"	"MS2"	"30.08688"	"35.2"	"100.000"	"65.2179"	"21532"	"21532"	"21505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.8"	""	"43.5"	""	"52.5"	""	"52.0"	""	"56.2"	"76.1"	""	"820"	"30"	"36.000"	"29.000"	"0.0432298627520416"	"20"	"9.9E-05"	"0.0008779"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"440.93204"	"1320.78156"	"1320.78370"	"-1.62"	"-0.00071"	"11/68"	"11"	"68"	"2983272.93231201"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"63.8142"	"20930"	"20930"	"20908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.5"	""	"49.5"	""	"51.2"	""	"61.9"	""	"59.8"	"65.3"	""	"789"	"42"	"35.000"	"28.000"	"0.00263055270454774"	"16"	"0"	"0.0001283"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"440.93210"	"1320.78174"	"1320.78370"	"-1.48"	"-0.00065"	"12/68"	"12"	"68"	"14397319.1208496"	"HCD"	"MS2"	"5.77196"	"83.4"	"80.952"	"64.0879"	"21073"	"21073"	"21056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.5"	""	"97.2"	""	"133.5"	""	"140.5"	"0.7"	"137.7"	"157.2"	""	"790"	"48"	"35.000"	"28.000"	"0.000694379827513684"	"17"	"0"	"9.072E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.93213"	"1320.78183"	"1320.78370"	"-1.41"	"-0.00062"	"9/68"	"9"	"68"	"2130072.90441895"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"63.7900"	"20952"	"20952"	"20937"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"40.7"	""	"57.3"	""	"62.6"	"0.6"	"60.4"	"66.1"	""	"790"	"30"	"35.000"	"28.000"	"0.0362741375611014"	"14"	"9.9E-05"	"0.0005029"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"440.93216"	"1320.78193"	"1320.78370"	"-1.35"	"-0.00059"	"11/68"	"11"	"68"	"13525219.3494263"	"HCD"	"MS2"	"8.276335"	"91.7"	"90.552"	"64.0962"	"21044"	"21044"	"21029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.0"	""	"120.3"	""	"139.4"	""	"141.8"	"1.7"	"152.6"	"165.0"	""	"788"	"44"	"35.000"	"28.000"	"0.00157578231405873"	"17"	"0"	"0.0003734"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.93231"	"1320.78238"	"1320.78370"	"-1.00"	"-0.00044"	"11/68"	"11"	"68"	"4849272.30822754"	"HCD"	"MS2"	"5.232267"	"46.7"	"100.000"	"64.3930"	"21196"	"21196"	"21179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.3"	""	"61.1"	""	"70.0"	""	"75.4"	""	"80.0"	"85.3"	""	"787"	"40"	"35.000"	"28.000"	"0.00394407111183653"	"15"	"0"	"0.0002463"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHDLVLPIR"	"[R].eHDLVLPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"440.93265"	"1320.78339"	"1320.78370"	"-0.24"	"-0.00010"	"11/68"	"11"	"68"	"6010647.21655273"	"HCD"	"MS2"	"5.992472"	"53.7"	"100.000"	"64.3691"	"21153"	"21153"	"21139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.4"	""	"57.7"	""	"78.8"	""	"86.9"	"0.4"	"94.6"	"108.9"	""	"822"	"42"	"36.000"	"29.000"	"0.00265975615072668"	"15"	"0"	"0.0001695"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"660.89917"	"1320.79106"	"1320.79276"	"-1.28"	"-0.00085"	"7/56"	"7"	"56"	"1175029.67907715"	"HCD"	"MS2"	"0"	"93.7"	"100.000"	"56.5077"	"17995"	"17995"	"17978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.1"	""	"118.5"	""	"128.7"	""	"145.8"	""	"183.3"	"176.1"	""	"719"	"36"	"35.000"	"28.000"	"0.00888584830133298"	"21"	"0.002286"	"0.02174"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"440.93530"	"1320.79135"	"1320.79276"	"-1.06"	"-0.00047"	"7/58"	"7"	"58"	"689770.647216797"	"HCD"	"MS2"	"34.13389"	"33.3"	"100.000"	"71.9110"	"24247"	"24247"	"24218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.6"	""	"53.6"	""	"50.3"	""	"57.6"	""	"41.2"	"52.7"	""	"718"	"19"	"35.000"	"28.000"	"0.492146554053182"	"23"	"0.004213"	"0.0471"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"660.89954"	"1320.79180"	"1320.79276"	"-0.73"	"-0.00048"	"7/56"	"7"	"56"	"2609057.97949219"	"HCD"	"MS2"	"0"	"179.3"	"100.000"	"56.8034"	"18114"	"18114"	"18101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.1"	""	"234.1"	""	"253.5"	""	"286.1"	""	"320.5"	"343.4"	""	"718"	"34"	"35.000"	"28.000"	"0.0138068449754282"	"20"	"0.0001686"	"0.001705"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"660.89954"	"1320.79180"	"1320.79276"	"-0.73"	"-0.00048"	"6/58"	"6"	"58"	"2199339.54852295"	"HCD"	"MS2"	"19.44187"	"142.4"	"100.000"	"71.7389"	"24146"	"24146"	"24132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.2"	""	"224.7"	""	"174.5"	""	"255.1"	"2.3"	"185.0"	"201.0"	""	"718"	"33"	"35.000"	"28.000"	"0.0178687613507438"	""	"0.001615"	"0.01334"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"660.89960"	"1320.79192"	"1320.79276"	"-0.64"	"-0.00042"	"6/56"	"6"	"56"	"2264012.63232422"	"HCD"	"MS2"	"20.24087"	"162.0"	"100.000"	"57.7279"	"18456"	"18456"	"18439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.9"	""	"196.5"	""	"227.0"	""	"254.9"	""	"309.2"	"314.0"	""	"718"	"33"	"35.000"	"28.000"	"0.0182849782709533"	"21"	"0.0001686"	"0.001134"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"660.89966"	"1320.79204"	"1320.79276"	"-0.54"	"-0.00036"	"7/56"	"7"	"56"	"2372124.28076172"	"HCD"	"MS2"	"12.76652"	"163.7"	"100.000"	"57.4080"	"18360"	"18360"	"18341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.2"	""	"212.6"	""	"245.0"	""	"257.5"	""	"299.1"	"318.4"	""	"719"	"33"	"35.000"	"28.000"	"0.0170489993701058"	"21"	"0.0001991"	"0.002213"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"660.89984"	"1320.79241"	"1320.79276"	"-0.27"	"-0.00018"	"6/58"	"6"	"58"	"2819119.19647217"	"HCD"	"MS2"	"6.782222"	"197.0"	"100.000"	"72.0273"	"24261"	"24261"	"24251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"417.0"	""	"298.1"	""	"279.3"	""	"340.5"	"2.5"	"245.6"	"273.1"	""	"721"	"33"	"35.000"	"28.000"	"0.0167843786715027"	""	"0.001615"	"0.01442"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"660.89984"	"1320.79241"	"1320.79276"	"-0.27"	"-0.00018"	"6/58"	"6"	"58"	"2691030.97143555"	"HCD"	"MS2"	"7.964147"	"181.1"	"100.000"	"72.1583"	"24343"	"24343"	"24328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"362.7"	""	"281.3"	""	"248.4"	""	"328.5"	""	"239.3"	"248.0"	""	"721"	"33"	"35.000"	"28.000"	"0.0164023195684092"	""	"0.001261"	"0.01015"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"660.89984"	"1320.79241"	"1320.79276"	"-0.27"	"-0.00018"	"7/56"	"7"	"56"	"3103580.56408691"	"HCD"	"MS2"	"9.159779"	"197.9"	"100.000"	"57.4221"	"18331"	"18331"	"18314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"272.6"	""	"246.5"	""	"283.5"	""	"317.3"	""	"362.6"	"397.6"	""	"721"	"33"	"35.000"	"28.000"	"0.0198109485025674"	"20"	"0.0001991"	"0.002271"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNVPLEK"	"[R].yNVPLEk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"660.89996"	"1320.79265"	"1320.79276"	"-0.08"	"-0.00005"	"6/58"	"6"	"58"	"2279217.13275146"	"HCD"	"MS2"	"33.50263"	"151.9"	"100.000"	"71.8488"	"24221"	"24221"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"324.4"	""	"241.7"	""	"196.8"	""	"259.0"	"1.9"	"194.4"	"213.4"	""	"721"	"31"	"35.000"	"28.000"	"0.0276633816914936"	""	"0.001615"	"0.01325"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"660.90002"	"1320.79277"	"1320.79276"	"0.01"	"0.00001"	"6/56"	"6"	"56"	"3123987.09960938"	"HCD"	"MS2"	"5.978567"	"211.3"	"100.000"	"57.0996"	"18234"	"18234"	"18216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"314.0"	""	"278.7"	""	"296.2"	""	"322.4"	""	"391.3"	"401.9"	""	"722"	"34"	"35.000"	"28.000"	"0.0158674523173055"	"21"	"0.0001686"	"0.001724"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"660.90009"	"1320.79289"	"1320.79276"	"0.10"	"0.00007"	"6/56"	"6"	"56"	"2807079.34893799"	"HCD"	"MS2"	"3.079847"	"200.1"	"100.000"	"57.1349"	"18214"	"18214"	"18196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.9"	""	"256.5"	""	"277.6"	""	"329.6"	""	"359.6"	"387.6"	""	"722"	"34"	"35.000"	"28.000"	"0.015721978640049"	"21"	"0.0001991"	"0.002465"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAPEYAK"	"[K].aLAPEYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"660.90021"	"1320.79314"	"1320.79276"	"0.29"	"0.00019"	"7/56"	"7"	"56"	"1282776.20611572"	"HCD"	"MS2"	"0"	"97.9"	"100.000"	"56.8252"	"18088"	"18088"	"18069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.8"	""	"134.8"	""	"137.1"	""	"161.1"	"1.5"	"187.6"	"175.8"	""	"722"	"32"	"35.000"	"28.000"	"0.0213553749937346"	"20"	"0.002508"	"0.02341"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPYPTDVAR"	"[R].sSPYPTDVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"661.34967"	"1321.69206"	"1321.69495"	"-2.18"	"-0.00144"	"8/84"	"8"	"84"	"1047638.33917236"	"HCD"	"MS2"	"28.6294"	"78.3"	"100.000"	"39.4821"	"11088"	"11088"	"11077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.3"	""	"110.7"	""	"107.3"	""	"109.0"	"1.8"	"152.6"	"133.1"	""	"792"	"20"	"35.000"	"28.000"	"0.366180476879536"	"25"	"0.006845"	"0.08599"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSTEEIVQR"	"[K].mSTEEIVQR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"Q63569"	"26S proteasome regulatory subunit 6A OS=Rattus norvegicus OX=10116 GN=Psmc3 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"661.35205"	"1321.69682"	"1321.69832"	"-1.13"	"-0.00075"	"7/72"	"7"	"72"	"687328.807556152"	"HCD"	"MS2"	"39.63312"	"59.8"	"100.000"	"47.7058"	"14386"	"14386"	"14361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.3"	""	"82.5"	""	"84.6"	""	"77.0"	""	"113.0"	"120.7"	""	"828"	"26"	"36.000"	"29.000"	"0.103038692976891"	"18"	"9.9E-05"	"0.0008873"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVMTQGASR"	"[R].vSGVMTQGASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"661.35828"	"1321.70928"	"1321.70955"	"-0.21"	"-0.00014"	"10/104"	"10"	"104"	"994869.304321289"	"HCD"	"MS2"	"13.68724"	"68.9"	"100.000"	"38.6819"	"10765"	"10765"	"10738"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.1"	""	"76.6"	""	"83.0"	""	"119.0"	"0.3"	"145.0"	"151.0"	""	"930"	"42"	"36.000"	"29.000"	"0.00319486824606618"	"23"	"0"	"2.243E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGVMTQGASR"	"[R].vSGVMTQGASR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"P70490"	"Lactadherin OS=Rattus norvegicus OX=10116 GN=Mfge8 PE=2 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"661.35840"	"1321.70952"	"1321.70955"	"-0.02"	"-0.00001"	"9/104"	"9"	"104"	"1203044.37609863"	"HCD"	"MS2"	"6.343115"	"73.4"	"100.000"	"38.7211"	"10745"	"10745"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.5"	""	"91.4"	""	"80.7"	""	"129.6"	""	"152.0"	"160.3"	""	"930"	"50"	"36.000"	"29.000"	"0.000422136546532856"	"23"	"0"	"5.235E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEMNGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"661.36243"	"1321.71758"	"1321.71861"	"-0.78"	"-0.00052"	"12/62"	"12"	"62"	"1630464.30316162"	"HCD"	"MS2"	"44.70614"	"150.2"	"100.000"	"40.9949"	"11666"	"11666"	"11642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.8"	""	"176.3"	""	"195.6"	""	"214.7"	""	"287.0"	"293.0"	""	"979"	"36"	"36.000"	"29.000"	"0.0126985079775716"	"27"	"0.0001991"	"0.002295"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEMNGK"	"[K].aVDEMNGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"661.36279"	"1321.71831"	"1321.71861"	"-0.23"	"-0.00015"	"7/62"	"7"	"62"	"1628608.04412842"	"HCD"	"MS2"	"51.31763"	"151.5"	"100.000"	"40.8330"	"11635"	"11635"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.7"	""	"185.9"	""	"215.2"	""	"196.0"	"0.5"	"287.8"	"299.5"	""	"972"	"41"	"36.000"	"29.000"	"0.0039051369538221"	"22"	"0.0001686"	"0.001052"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"661.36896"	"1321.73064"	"1321.73133"	"-0.52"	"-0.00035"	"8/86"	"8"	"86"	"6649070.36651611"	"HCD"	"MS2"	"0"	"292.9"	"100.000"	"95.3140"	"33667"	"33667"	"33649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"416.0"	""	"401.0"	""	"439.2"	""	"491.1"	""	"533.2"	"493.3"	""	"1004"	"39"	"37.000"	"30.000"	"0.00579033535426188"	"27"	"9.9E-05"	"0.0006034"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"661.36914"	"1321.73100"	"1321.73133"	"-0.25"	"-0.00016"	"7/86"	"7"	"86"	"857481.960205078"	"HCD"	"MS2"	"28.19197"	"50.3"	"100.000"	"95.0189"	"33580"	"33580"	"33562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.3"	""	"79.4"	""	"68.5"	""	"81.6"	"0.0"	"88.5"	"93.1"	""	"997"	"31"	"36.000"	"29.000"	"0.0410832850333982"	"22"	"0"	"0.0002143"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQAAMEK"	"[K].sVQAAMEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62651"	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ech1 PE=1 SV=2"	"Q62651"	"Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ech1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"661.36914"	"1321.73100"	"1321.75499"	"-18.15"	"-0.01199"	"7/78"	"7"	"78"	"1554694.5682373"	"HCD"	"MS2"	"0"	"136.6"	"100.000"	"46.7055"	"14017"	"14017"	"13993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.6"	""	"192.7"	""	"176.4"	""	"215.2"	""	"265.8"	"248.3"	""	"997"	"20"	"36.000"	"29.000"	"0.490529536221925"	"25"	"0.006697"	"0.08317"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"661.36920"	"1321.73113"	"1321.73133"	"-0.15"	"-0.00010"	"7/86"	"7"	"86"	"943885.813903809"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"95.6182"	"33823"	"33823"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.5"	""	"74.2"	""	"89.3"	""	"87.1"	"0.2"	"100.5"	"90.8"	""	"997"	"34"	"36.000"	"29.000"	"0.0182249003619143"	"25"	"0"	"0.0002032"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"661.36926"	"1321.73125"	"1321.73133"	"-0.06"	"-0.00004"	"7/86"	"7"	"86"	"2927371.40008545"	"HCD"	"MS2"	"0.6017432"	"137.7"	"100.000"	"81.4150"	"28068"	"28068"	"28058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.5"	""	"144.1"	""	"168.9"	""	"204.0"	"0.5"	"302.7"	"317.3"	""	"985"	"61"	"36.000"	"29.000"	"3.99398320993017E-05"	"28"	"0"	"0.0002062"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"661.36932"	"1321.73137"	"1321.73133"	"0.03"	"0.00002"	"7/86"	"7"	"86"	"835690.630310059"	"HCD"	"MS2"	"25.94955"	"50.3"	"100.000"	"95.0262"	"33550"	"33550"	"33530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.8"	""	"66.5"	""	"72.1"	""	"89.5"	"0.8"	"95.1"	"83.1"	""	"983"	"34"	"36.000"	"29.000"	"0.0194770653836549"	"25"	"0"	"0.0002772"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"661.36938"	"1321.73149"	"1321.73133"	"0.12"	"0.00008"	"13/86"	"13"	"86"	"614225.961730957"	"HCD"	"MS2"	"48.36848"	"36.5"	"100.000"	"80.8363"	"27834"	"27834"	"27814"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"45.9"	""	"38.0"	""	"83.1"	""	"70.0"	"70.2"	""	"987"	"26"	"36.000"	"29.000"	"0.116758137070922"	"22"	"0.0001686"	"0.001681"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"661.36938"	"1321.73149"	"1321.73133"	"0.12"	"0.00008"	"7/86"	"7"	"86"	"2723399.70550537"	"HCD"	"MS2"	"0"	"125.5"	"100.000"	"81.4886"	"28126"	"28126"	"28109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.0"	""	"138.7"	""	"144.7"	""	"195.9"	"1.8"	"252.4"	"300.5"	""	"987"	"57"	"36.000"	"29.000"	"9.33871575801296E-05"	"26"	"0"	"0.0002043"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"661.36938"	"1321.73149"	"1321.73133"	"0.12"	"0.00008"	"7/86"	"7"	"86"	"5318709.14465332"	"HCD"	"MS2"	"0"	"229.3"	"100.000"	"81.1292"	"27953"	"27953"	"27939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"275.1"	""	"260.7"	""	"233.3"	""	"369.3"	""	"508.2"	"536.1"	""	"987"	"61"	"36.000"	"29.000"	"3.84846159543228E-05"	"27"	"0"	"8.082E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"661.36938"	"1321.73149"	"1321.73133"	"0.12"	"0.00008"	"7/86"	"7"	"86"	"5752695.68609619"	"HCD"	"MS2"	"0"	"252.8"	"100.000"	"81.1981"	"28008"	"28008"	"27992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"307.4"	""	"266.7"	""	"276.9"	""	"421.4"	""	"546.3"	"590.2"	""	"987"	"61"	"36.000"	"29.000"	"3.95628124281819E-05"	"27"	"0"	"8.854E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"661.36945"	"1321.73161"	"1321.73133"	"0.21"	"0.00014"	"7/86"	"7"	"86"	"810146.44519043"	"HCD"	"MS2"	"8.416681"	"47.6"	"100.000"	"95.6326"	"33796"	"33796"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.6"	""	"61.0"	""	"74.7"	""	"74.8"	"0.7"	"88.9"	"83.6"	""	"987"	"31"	"36.000"	"29.000"	"0.0367525229122606"	""	"0"	"0.0002107"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITAEELR"	"[K].nFITAEELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"661.36987"	"1321.73247"	"1321.73133"	"0.86"	"0.00057"	"7/86"	"7"	"86"	"760387.192199707"	"HCD"	"MS2"	"20.3466"	"41.6"	"100.000"	"80.9165"	"27894"	"27894"	"27871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.7"	""	"46.3"	""	"49.9"	""	"71.8"	""	"93.7"	"78.8"	""	"982"	"60"	"36.000"	"29.000"	"4.66746953685235E-05"	"26"	"0"	"5.049E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AELNEFLTR"	"[K].aELNEFLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"661.36987"	"1321.73247"	"1321.73133"	"0.86"	"0.00057"	"7/86"	"7"	"86"	"6407888.57727051"	"HCD"	"MS2"	"0"	"288.1"	"100.000"	"95.3091"	"33698"	"33698"	"33680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.8"	""	"383.8"	""	"416.7"	""	"482.1"	""	"545.1"	"487.3"	""	"982"	"37"	"36.000"	"29.000"	"0.00997887292369685"	"25"	"0.0001686"	"0.001076"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"441.25174"	"1321.74067"	"1321.74256"	"-1.44"	"-0.00063"	"8/80"	"8"	"80"	"4195969.89691162"	"HCD"	"MS2"	"3.654737"	"53.8"	"100.000"	"49.9446"	"15296"	"15296"	"15278"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.2"	""	"71.9"	""	"67.4"	""	"94.7"	"0.9"	"103.1"	"100.9"	""	"896"	"39"	"36.000"	"29.000"	"0.00629909290810201"	"23"	"0"	"0.0001229"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"441.25192"	"1321.74121"	"1321.74256"	"-1.02"	"-0.00045"	"13/80"	"13"	"80"	"5093811.69970703"	"HCD"	"MS2"	"11.62916"	"58.6"	"100.000"	"49.0738"	"14977"	"14977"	"14956"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.0"	""	"76.1"	""	"80.1"	""	"96.5"	""	"116.2"	"108.3"	""	"891"	"57"	"36.000"	"29.000"	"8.99182215020135E-05"	"28"	"0"	"4.153E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"661.37427"	"1321.74126"	"1321.74256"	"-0.99"	"-0.00065"	"6/80"	"6"	"80"	"1262994.31872559"	"HCD"	"MS2"	"19.29992"	"84.8"	"100.000"	"49.2462"	"15047"	"15047"	"15022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.7"	""	"90.9"	""	"111.5"	""	"142.2"	"5.0"	"179.0"	"159.7"	""	"916"	"29"	"36.000"	"29.000"	"0.0600987553750795"	"21"	"0.0001991"	"0.005429"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"441.25220"	"1321.74204"	"1321.74256"	"-0.40"	"-0.00018"	"10/78"	"10"	"78"	"3115470.64044189"	"HCD"	"MS2"	"60.63923"	"127.9"	"100.000"	"40.6916"	"11542"	"11542"	"11518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.8"	""	"176.1"	""	"182.4"	""	"185.6"	"0.4"	"233.6"	"231.0"	""	"947"	"39"	"36.000"	"29.000"	"0.00611392326056008"	""	"0.0001686"	"0.001646"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.7679"	"0.0000"	"1"	"1"	"1"	"441.25220"	"1321.74204"	"1321.74256"	"-0.40"	"-0.00018"	"7/80"	"7"	"80"	"27541013.652832"	"HCD"	"MS2"	"1.581323"	"69.0"	"38.937"	"49.6569"	"15179"	"15179"	"15164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"90.2"	""	"79.8"	""	"141.5"	"1.0"	"136.8"	"109.2"	""	"947"	"56"	"36.000"	"29.000"	"0.000130713361492033"	"29"	"0"	"0.0001026"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"441.25223"	"1321.74213"	"1321.74256"	"-0.33"	"-0.00014"	"8/80"	"8"	"80"	"2196843.74554443"	"HCD"	"MS2"	"5.438738"	"46.3"	"100.000"	"49.6716"	"15220"	"15220"	"15200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"60.1"	""	"69.7"	""	"83.2"	"1.4"	"94.5"	"72.6"	""	"946"	"32"	"36.000"	"29.000"	"0.0310356710961274"	"19"	"9.9E-05"	"0.0007055"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"441.25226"	"1321.74222"	"1321.74256"	"-0.26"	"-0.00011"	"11/80"	"11"	"80"	"2277051.73602295"	"HCD"	"MS2"	"44.17824"	"53.8"	"100.000"	"49.3605"	"15059"	"15059"	"15036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.1"	""	"62.5"	""	"76.6"	""	"83.2"	"1.4"	"115.7"	"106.0"	""	"945"	"22"	"36.000"	"29.000"	"0.294714709765443"	"18"	"9.9E-05"	"0.0007027"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"441.25226"	"1321.74222"	"1321.74256"	"-0.26"	"-0.00011"	"10/78"	"10"	"78"	"4169196.34802246"	"HCD"	"MS2"	"34.65648"	"141.5"	"100.000"	"40.2811"	"11410"	"11410"	"11386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.7"	""	"224.3"	""	"203.1"	""	"197.1"	"1.7"	"254.9"	"256.4"	""	"945"	"42"	"36.000"	"29.000"	"0.00319449205872711"	"27"	"0"	"0.0001562"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVGPELHDR"	"[K].gLVGPELHDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"441.25235"	"1321.74250"	"1321.74256"	"-0.05"	"-0.00002"	"10/78"	"10"	"78"	"3981514.47857666"	"HCD"	"MS2"	"33.01188"	"129.4"	"100.000"	"40.3746"	"11414"	"11414"	"11389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.2"	""	"208.9"	""	"190.9"	""	"187.5"	""	"239.6"	"217.0"	""	"933"	"40"	"36.000"	"29.000"	"0.00469733623519367"	"27"	"0"	"0.0001541"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"441.25244"	"1321.74277"	"1321.74256"	"0.16"	"0.00007"	"8/80"	"8"	"80"	"26296311.2978516"	"HCD"	"MS2"	"2.200568"	"65.4"	"40.228"	"49.3659"	"15096"	"15096"	"15079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.9"	""	"85.9"	""	"81.7"	""	"125.3"	""	"131.3"	"112.7"	""	"935"	"57"	"36.000"	"29.000"	"8.99045383265499E-05"	"27"	"0"	"3.603E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHIEIGPDGR"	"[R].vHIEIGPDGR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q794E4; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"661.37512"	"1321.74297"	"1321.74256"	"0.30"	"0.00020"	"6/80"	"6"	"80"	"1176156.24334717"	"HCD"	"MS2"	"31.46794"	"85.8"	"100.000"	"49.6063"	"15159"	"15159"	"15132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.7"	""	"102.2"	""	"107.9"	""	"155.8"	"1.5"	"171.6"	"161.2"	""	"935"	"27"	"36.000"	"29.000"	"0.0945761466032092"	"21"	"0.0001686"	"0.001957"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].eMLQQSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"661.38049"	"1321.75371"	"1321.75499"	"-0.97"	"-0.00064"	"6/64"	"6"	"64"	"4583028.375"	"HCD"	"MS2"	"17.89666"	"352.5"	"100.000"	"42.6492"	"12334"	"12334"	"12314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"748.5"	""	"421.3"	""	"453.2"	""	"388.2"	""	"617.7"	"711.7"	""	"892"	"34"	"36.000"	"29.000"	"0.0160448203479461"	"26"	"0.002588"	"0.02719"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].eMLQQSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"661.38068"	"1321.75408"	"1321.75499"	"-0.69"	"-0.00046"	"6/64"	"6"	"64"	"2540632.55926514"	"HCD"	"MS2"	"19.06668"	"159.0"	"100.000"	"42.9664"	"12464"	"12464"	"12441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.8"	""	"179.4"	""	"198.7"	""	"187.4"	""	"330.8"	"340.7"	""	"898"	"25"	"36.000"	"29.000"	"0.142641645772175"	"21"	"0.00455"	"0.05381"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].eMLQQSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"661.38086"	"1321.75444"	"1321.75499"	"-0.42"	"-0.00028"	"6/64"	"6"	"64"	"2418718.14727783"	"HCD"	"MS2"	"24.98981"	"154.1"	"100.000"	"42.8099"	"12434"	"12434"	"12414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.2"	""	"170.8"	""	"188.5"	""	"178.1"	"1.1"	"330.5"	"328.9"	""	"898"	"17"	"36.000"	"29.000"	"0.883580944078374"	"19"	"0.004959"	"0.06149"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].eMLQQSk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"661.38104"	"1321.75481"	"1321.75499"	"-0.14"	"-0.00009"	"12/64"	"12"	"64"	"5153922.70013428"	"HCD"	"MS2"	"13.94085"	"390.9"	"100.000"	"42.5017"	"12308"	"12308"	"12287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"800.8"	""	"488.4"	""	"499.5"	""	"404.0"	""	"718.5"	"793.0"	""	"884"	"37"	"36.000"	"29.000"	"0.00844155140286278"	""	"0.002328"	"0.02215"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPFEEK"	"[K].iTPFEEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.3810"	"0.0000"	"1"	"1"	"1"	"661.39111"	"1321.77495"	"1321.77677"	"-1.38"	"-0.00091"	"6/56"	"6"	"56"	"4733471.45281982"	"HCD"	"MS2"	"0"	"315.6"	"100.000"	"77.1134"	"26354"	"26354"	"26341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"486.8"	""	"354.4"	""	"454.4"	""	"503.8"	"2.1"	"556.3"	"632.0"	""	"723"	"21"	"35.000"	"28.000"	"0.267367306933553"	"27"	"0.004672"	"0.05492"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPFEEK"	"[K].iTPFEEk.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"661.39148"	"1321.77568"	"1321.77677"	"-0.83"	"-0.00055"	"6/56"	"6"	"56"	"4604816.48626709"	"HCD"	"MS2"	"0"	"306.0"	"100.000"	"76.9962"	"26277"	"26277"	"26268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"453.8"	""	"379.0"	""	"429.5"	""	"504.0"	""	"538.5"	"597.9"	""	"720"	"23"	"35.000"	"28.000"	"0.190240290639065"	"26"	"0.004213"	"0.04683"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLPVETQR"	"[K].hLLPVETQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"441.26373"	"1321.77665"	"1321.77895"	"-1.74"	"-0.00077"	"4/68"	"4"	"68"	"5751777.81610107"	"HCD"	"MS2"	"29.07666"	"233.9"	"100.000"	"39.7382"	"11156"	"11156"	"11136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"316.6"	""	"307.8"	""	"323.5"	""	"368.8"	""	"449.8"	"456.8"	""	"732"	"22"	"35.000"	"28.000"	"0.243489975169837"	"15"	"0.0005161"	"0.006534"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLPVETQR"	"[K].hLLPVETQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.26407"	"1321.77765"	"1321.77895"	"-0.98"	"-0.00043"	"5/68"	"5"	"68"	"3695818.02996826"	"HCD"	"MS2"	"26.69393"	"153.2"	"100.000"	"40.0482"	"11281"	"11281"	"11257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"212.5"	""	"236.2"	""	"197.9"	""	"249.9"	""	"281.0"	"276.2"	""	"760"	"15"	"35.000"	"28.000"	"1.1961443593585"	"13"	"0.001348"	"0.01107"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLPVETQR"	"[K].hLLPVETQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"441.26416"	"1321.77793"	"1321.77895"	"-0.77"	"-0.00034"	"7/68"	"7"	"68"	"6689556.50494385"	"HCD"	"MS2"	"37.50798"	"232.9"	"100.000"	"39.7044"	"11176"	"11176"	"11162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"309.1"	"2.1"	"309.9"	""	"313.3"	""	"391.8"	""	"446.5"	"437.6"	""	"773"	"25"	"35.000"	"28.000"	"0.113540159048313"	"17"	"0.001872"	"0.0156"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLPVETQR"	"[K].hLLPVETQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"441.26419"	"1321.77802"	"1321.77895"	"-0.70"	"-0.00031"	"5/68"	"5"	"68"	"3424701.93798828"	"HCD"	"MS2"	"39.8158"	"152.0"	"100.000"	"40.0074"	"11298"	"11298"	"11282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.0"	""	"232.2"	""	"209.2"	""	"233.2"	""	"269.1"	"276.7"	""	"772"	"18"	"35.000"	"28.000"	"0.614592568641752"	"15"	"0.004672"	"0.05492"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"441.56760"	"1322.68824"	"1322.69019"	"-1.48"	"-0.00065"	"11/80"	"11"	"80"	"893901.998168945"	"HCD"	"MS2"	"36.56546"	"34.6"	"100.000"	"66.5254"	"22029"	"22029"	"22017"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"46.6"	""	"42.7"	""	"58.9"	""	"75.6"	"66.3"	""	"767"	"35"	"35.000"	"28.000"	"0.0126988785088574"	"19"	"0.0001991"	"0.002457"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"441.56763"	"1322.68833"	"1322.69019"	"-1.41"	"-0.00062"	"11/80"	"11"	"80"	"911192.728942871"	"HCD"	"MS2"	"25.28201"	"34.8"	"100.000"	"66.5037"	"22054"	"22054"	"22035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.0"	""	"40.6"	""	"44.3"	""	"54.9"	""	"74.3"	"70.3"	""	"764"	"31"	"35.000"	"28.000"	"0.0276734536748646"	"19"	"0.0001686"	"0.001608"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"661.84784"	"1322.68840"	"1322.69019"	"-1.36"	"-0.00090"	"9/80"	"9"	"80"	"1098592.74017334"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"66.8522"	"22192"	"22192"	"22175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.7"	""	"90.6"	""	"90.5"	""	"97.4"	""	"139.9"	"154.1"	""	"764"	"43"	"35.000"	"28.000"	"0.00187526808690294"	"17"	"0"	"2.362E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"661.84796"	"1322.68865"	"1322.69019"	"-1.17"	"-0.00077"	"8/80"	"8"	"80"	"3569779.98590088"	"HCD"	"MS2"	"0"	"181.6"	"100.000"	"66.6996"	"22098"	"22098"	"22083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.6"	""	"236.7"	""	"204.6"	""	"287.8"	""	"372.3"	"384.8"	""	"753"	"47"	"35.000"	"28.000"	"0.00070107580695357"	"18"	"0"	"4.061E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADLSEAANR"	"[K].fADLSEAANR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"661.84827"	"1322.68926"	"1322.69019"	"-0.71"	"-0.00047"	"8/80"	"8"	"80"	"6973406.58892822"	"HCD"	"MS2"	"0"	"310.6"	"100.000"	"66.5611"	"22077"	"22077"	"22066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.0"	""	"415.9"	""	"375.2"	""	"453.4"	""	"635.0"	"686.2"	""	"790"	"48"	"35.000"	"28.000"	"0.000700804844951615"	"18"	"0"	"9.259E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEEIANR"	"[R].aQYEEIANR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"661.84851"	"1322.68974"	"1322.69019"	"-0.34"	"-0.00023"	"7/80"	"7"	"80"	"1109395.37042236"	"HCD"	"MS2"	"38.69481"	"84.4"	"100.000"	"41.1379"	"11757"	"11757"	"11739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.5"	""	"96.2"	""	"114.2"	""	"127.3"	"0.0"	"145.0"	"181.9"	""	"790"	"31"	"35.000"	"28.000"	"0.0296891043137191"	"22"	"0"	"0.0002969"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEEIANR"	"[R].aQYEEIANR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"661.85010"	"1322.69292"	"1322.69019"	"2.06"	"0.00136"	"7/80"	"7"	"80"	"1133310.13812256"	"HCD"	"MS2"	"48.10994"	"88.2"	"100.000"	"41.2589"	"11769"	"11769"	"11746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.3"	""	"111.0"	""	"126.1"	""	"122.6"	""	"156.1"	"186.0"	""	"790"	"26"	"35.000"	"28.000"	"0.090906951787636"	"21"	"0.0001686"	"0.001479"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"5"	"661.85278"	"1322.69829"	"1322.69925"	"-0.73"	"-0.00048"	"12/54"	"12"	"54"	"8288268.76141357"	"HCD"	"MS2"	"3.280136"	"743.8"	"100.000"	"48.8604"	"14891"	"14891"	"14877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1096.4"	""	"648.5"	""	"791.9"	""	"1373.8"	""	"1424.7"	"1729.1"	""	"827"	"22"	"36.000"	"29.000"	"0.272568405683527"	""	"0.007412"	"0.09356"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"1"	"661.85284"	"1322.69841"	"1322.69925"	"-0.64"	"-0.00042"	"10/54"	"10"	"54"	"8425826.06817627"	"HCD"	"MS2"	"9.394857"	"709.8"	"100.000"	"48.5827"	"14779"	"14779"	"14766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1081.4"	""	"713.0"	""	"802.7"	""	"1324.5"	"12.6"	"1316.5"	"1481.0"	""	"827"	"21"	"36.000"	"29.000"	"0.327699300153675"	""	"0.007259"	"0.09237"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"661.85297"	"1322.69866"	"1322.69925"	"-0.45"	"-0.00030"	"6/54"	"6"	"54"	"3595045.81719971"	"HCD"	"MS2"	"23.73284"	"324.2"	"100.000"	"48.7476"	"14810"	"14810"	"14787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"495.3"	""	"367.4"	""	"377.2"	""	"570.1"	"2.0"	"545.5"	"715.6"	""	"839"	"13"	"36.000"	"29.000"	"2.12193445710307"	"24"	"0.007522"	"0.09608"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"661.85333"	"1322.69939"	"1322.69925"	"0.10"	"0.00007"	"12/54"	"12"	"54"	"3557095.70257568"	"HCD"	"MS2"	"9.542129"	"340.4"	"100.000"	"49.3055"	"15037"	"15037"	"15026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"472.5"	""	"294.1"	""	"396.9"	""	"607.3"	""	"657.0"	"808.0"	""	"831"	"21"	"36.000"	"29.000"	"0.313740820594988"	""	"0.004959"	"0.06172"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WGTDEEK"	"[K].wGTDEEk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"661.85339"	"1322.69951"	"1322.69925"	"0.20"	"0.00013"	"12/54"	"12"	"54"	"10468210.0662231"	"HCD"	"MS2"	"3.613837"	"861.9"	"100.000"	"49.0254"	"14923"	"14923"	"14910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1308.5"	""	"824.4"	""	"929.4"	""	"1618.1"	"5.2"	"1628.8"	"1862.6"	""	"831"	"21"	"36.000"	"29.000"	"0.301003141411159"	""	"0.008327"	"0.1065"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETYGAFLHR"	"[K].eTYGAFLHR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.57291"	"1322.70417"	"1322.70545"	"-0.97"	"-0.00043"	"6/66"	"6"	"66"	"1665508.2300415"	"HCD"	"MS2"	"53.7408"	"49.4"	"100.000"	"52.2888"	"16247"	"16247"	"16227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	"2.8"	"57.2"	""	"70.6"	""	"80.3"	""	"98.0"	"104.3"	""	"899"	"34"	"36.000"	"29.000"	"0.0196213866591954"	"15"	"9.9E-05"	"0.0005632"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETYGAFLHR"	"[K].eTYGAFLHR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"O54922"	"Exocyst complex component 7 OS=Rattus norvegicus OX=10116 GN=Exoc7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"441.57297"	"1322.70435"	"1322.70545"	"-0.83"	"-0.00037"	"9/66"	"9"	"66"	"1638471.59265137"	"HCD"	"MS2"	"58.06587"	"50.4"	"100.000"	"51.9361"	"16138"	"16138"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.5"	""	"64.3"	""	"66.9"	""	"85.0"	""	"98.2"	"100.7"	""	"899"	"26"	"36.000"	"29.000"	"0.102974500991911"	"14"	"0.0001991"	"0.002748"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"661.85980"	"1322.71233"	"1322.71535"	"-2.28"	"-0.00151"	"13/70"	"13"	"70"	"680761.674377441"	"HCD"	"MS2"	"15.50174"	"39.1"	"100.000"	"81.8832"	"28258"	"28258"	"28231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.3"	""	"48.2"	""	"48.7"	""	"58.5"	""	"85.5"	"78.7"	""	"897"	"50"	"36.000"	"29.000"	"0.000496320767113983"	"24"	"0"	"6.701E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"661.86078"	"1322.71428"	"1322.71535"	"-0.81"	"-0.00053"	"12/70"	"12"	"70"	"774002.165405273"	"HCD"	"MS2"	"27.51545"	"45.0"	"100.000"	"81.9520"	"28314"	"28314"	"28291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.3"	""	"57.1"	""	"55.1"	""	"70.5"	""	"99.9"	"82.3"	""	"963"	"44"	"36.000"	"29.000"	"0.0020445432004015"	"26"	"0"	"0.0003724"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"661.86139"	"1322.71550"	"1322.71535"	"0.12"	"0.00008"	"12/70"	"12"	"70"	"1382159.24084473"	"HCD"	"MS2"	"20.2931"	"96.6"	"100.000"	"82.1947"	"28385"	"28385"	"28368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.2"	""	"110.5"	""	"116.1"	""	"173.3"	""	"179.2"	"172.1"	""	"966"	"37"	"36.000"	"29.000"	"0.00933140697119174"	"23"	"0"	"0.0002117"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVLDEADR"	"[K].yLVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"Q64060"	"Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"661.86163"	"1322.71599"	"1322.71535"	"0.49"	"0.00032"	"7/70"	"7"	"70"	"1364294.42431641"	"HCD"	"MS2"	"16.07322"	"95.4"	"100.000"	"82.2381"	"28430"	"28430"	"28412"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.6"	""	"115.7"	""	"119.4"	""	"142.9"	""	"188.0"	"177.7"	""	"964"	"45"	"36.000"	"29.000"	"0.00157415335107066"	"23"	"0"	"0.0001219"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDTTWVK"	"[R].dDTTWVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"661.87164"	"1322.73601"	"1322.73564"	"0.28"	"0.00019"	"6/54"	"6"	"54"	"773590.111633301"	"HCD"	"MS2"	"0"	"68.1"	"100.000"	"61.8302"	"20123"	"20123"	"20100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.0"	""	"72.7"	""	"66.6"	""	"127.4"	""	"140.2"	"152.4"	""	"888"	"22"	"36.000"	"29.000"	"0.304356772544981"	"22"	"0.002711"	"0.02893"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDTTWVK"	"[R].dDTTWVk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"661.87195"	"1322.73662"	"1322.73564"	"0.74"	"0.00049"	"6/54"	"6"	"54"	"760706.943359375"	"HCD"	"MS2"	"5.642026"	"71.5"	"100.000"	"61.7520"	"20124"	"20124"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.9"	""	"75.1"	"2.3"	"82.4"	""	"121.9"	""	"138.6"	"154.1"	""	"939"	"21"	"36.000"	"29.000"	"0.377255514366147"	"23"	"0.002419"	"0.02273"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"661.87231"	"1322.73735"	"1322.73901"	"-1.25"	"-0.00083"	"7/62"	"7"	"62"	"1974434.6383667"	"HCD"	"MS2"	"5.696549"	"163.9"	"100.000"	"59.7829"	"19293"	"19293"	"19274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.3"	""	"255.3"	""	"246.4"	""	"199.1"	"0.0"	"311.3"	"305.6"	""	"930"	"45"	"36.000"	"29.000"	"0.00155043281934904"	""	"9.9E-05"	"0.0005407"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"661.87231"	"1322.73735"	"1322.73901"	"-1.25"	"-0.00083"	"7/62"	"7"	"62"	"1989057.15460205"	"HCD"	"MS2"	"4.047009"	"173.3"	"100.000"	"59.6240"	"19262"	"19262"	"19243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.8"	""	"253.9"	""	"262.4"	""	"213.7"	""	"333.7"	"325.8"	""	"930"	"47"	"36.000"	"29.000"	"0.000942872464577397"	""	"9.9E-05"	"0.001001"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NRDLSGYIR"	"[K].nRDLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"1"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"441.58414"	"1322.73786"	"1322.73781"	"0.03"	"0.00001"	"7/84"	"7"	"84"	"2998464.78588867"	"HCD"	"MS2"	"41.49012"	"126.2"	"100.000"	"40.6466"	"11559"	"11559"	"11537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.2"	""	"176.3"	""	"181.2"	""	"179.0"	""	"245.2"	"242.3"	""	"917"	"23"	"36.000"	"29.000"	"0.246796695283718"	"22"	"0.0005778"	"0.007117"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3600"	"0.0000"	"1"	"1"	"1"	"661.87262"	"1322.73796"	"1322.73901"	"-0.79"	"-0.00052"	"14/62"	"14"	"62"	"4671221.81274414"	"HCD"	"MS2"	"0"	"355.9"	"100.000"	"59.9256"	"19384"	"19384"	"19367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"500.9"	""	"498.8"	""	"543.7"	""	"400.1"	""	"699.5"	"736.3"	""	"917"	"50"	"36.000"	"29.000"	"0.000418156969844685"	""	"0.0001686"	"0.001711"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.4583"	"0.0000"	"1"	"1"	"1"	"441.58426"	"1322.73822"	"1322.73901"	"-0.59"	"-0.00026"	"4/62"	"4"	"62"	"1384800.70196533"	"HCD"	"MS2"	"61.73871"	"69.4"	"100.000"	"60.0065"	"19384"	"19384"	"19369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"88.1"	""	"107.3"	""	"90.6"	""	"138.9"	"143.9"	""	"917"	"24"	"36.000"	"29.000"	"0.172718691834122"	"27"	"0.0009352"	"0.008179"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"661.87286"	"1322.73845"	"1322.73901"	"-0.42"	"-0.00028"	"14/62"	"14"	"62"	"4763778.27941895"	"HCD"	"MS2"	"0"	"371.0"	"100.000"	"60.0619"	"19407"	"19407"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"517.1"	""	"530.8"	""	"545.9"	""	"400.1"	""	"741.1"	"792.3"	""	"917"	"50"	"36.000"	"29.000"	"0.000425931088338601"	""	"0.0001686"	"0.0014"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NRDLSGYIR"	"[K].nRDLSGYIR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"1"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"441.58447"	"1322.73886"	"1322.73781"	"0.79"	"0.00035"	"9/84"	"9"	"84"	"2846557.5557251"	"HCD"	"MS2"	"41.70059"	"123.1"	"100.000"	"40.7788"	"11578"	"11578"	"11550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.5"	""	"173.3"	""	"159.5"	""	"175.3"	""	"232.0"	"247.6"	""	"891"	"19"	"36.000"	"29.000"	"0.619223897205549"	"19"	"0.005426"	"0.0691"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAMk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.5870"	"0.0000"	"1"	"1"	"1"	"661.87317"	"1322.73906"	"1322.73901"	"0.04"	"0.00003"	"7/62"	"7"	"62"	"598318.661132813"	"HCD"	"MS2"	"5.978541"	"60.3"	"100.000"	"60.3705"	"19532"	"19532"	"19512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.1"	""	"90.7"	""	"91.1"	""	"70.1"	"2.4"	"122.2"	"122.0"	""	"896"	"47"	"36.000"	"29.000"	"0.00100294707007862"	""	"0"	"0.0001015"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSMTk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"661.87872"	"1322.75017"	"1322.75024"	"-0.05"	"-0.00004"	"9/76"	"9"	"76"	"779324.563781738"	"HCD"	"MS2"	"0"	"72.8"	"100.000"	"39.3859"	"11050"	"11050"	"11029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.9"	""	"119.8"	""	"109.4"	""	"98.7"	""	"134.3"	"121.7"	""	"882"	"25"	"36.000"	"29.000"	"0.156472704652007"	"20"	"0"	"6.39E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVSVSDK"	"[K].tEVSVSDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"661.88110"	"1322.75493"	"1322.75677"	"-1.39"	"-0.00092"	"6/68"	"6"	"68"	"1524602.0625"	"HCD"	"MS2"	"25.85239"	"139.3"	"100.000"	"40.9843"	"11696"	"11696"	"11679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.5"	""	"185.7"	""	"184.1"	""	"188.4"	""	"269.6"	"282.9"	""	"823"	"35"	"36.000"	"29.000"	"0.0139434370251282"	"22"	"0.0001686"	"0.001151"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEVSVSDK"	"[K].tEVSVSDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"661.88129"	"1322.75530"	"1322.75677"	"-1.11"	"-0.00074"	"7/68"	"7"	"68"	"1538163.09173584"	"HCD"	"MS2"	"27.16069"	"131.4"	"100.000"	"41.1209"	"11717"	"11717"	"11697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.9"	""	"166.3"	""	"175.3"	""	"187.1"	""	"253.9"	"262.8"	""	"816"	"34"	"36.000"	"29.000"	"0.0162427725585827"	"22"	"0.0001686"	"0.001113"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLTTK"	"[R].dGETLTTk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P24483"	"Adrenodoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdx1 PE=2 SV=1"	"P24483"	"Adrenodoxin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fdx1 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"661.88275"	"1322.75823"	"1322.75677"	"1.10"	"0.00073"	"7/68"	"7"	"68"	"619497.687011719"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"40.6663"	"11532"	"11532"	"11508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.7"	""	"70.5"	""	"76.6"	""	"82.3"	"3.1"	"109.2"	"103.0"	""	"772"	"13"	"35.000"	"28.000"	"1.78479074260115"	"17"	"0.004213"	"0.046"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"441.59476"	"1322.76972"	"1322.77202"	"-1.74"	"-0.00077"	"6/58"	"6"	"58"	"1077752.23217773"	"HCD"	"MS2"	"36.4431"	"51.6"	"100.000"	"71.0134"	"23850"	"23850"	"23826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.4"	""	"68.2"	""	"74.6"	""	"74.9"	""	"90.0"	"105.7"	""	"670"	"36"	"35.000"	"28.000"	"0.00816666624153531"	"21"	"0.0001991"	"0.002611"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"441.59518"	"1322.77100"	"1322.77202"	"-0.77"	"-0.00034"	"6/58"	"6"	"58"	"1203105.0279541"	"HCD"	"MS2"	"22.13539"	"53.3"	"100.000"	"71.3337"	"23980"	"23980"	"23958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.0"	""	"67.4"	""	"95.8"	""	"75.1"	""	"98.8"	"103.1"	""	"671"	"33"	"35.000"	"28.000"	"0.016814831688195"	"20"	"0.0001991"	"0.003561"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAEFLQK"	"[K].eAEFLQk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"Q5I6B8"	"Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma OS=Rattus norvegicus OX=10116 GN=Pip5k1c PE=1 SV=1"	"D3ZSI8; Q5CZZ9; Q5I6B8"	"Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha OS=Rattus norvegicus OX=10116 GN=Pip5k1a PE=1 SV=1; Phosphatidylinositol 4-phosphate 5-kinase type-1 beta OS=Rattus norvegicus OX=10116 GN=Pip5k1b PE=1 SV=1; Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma OS=Rattus norvegicus OX=10116 GN=Pip5k1c PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"661.88922"	"1322.77117"	"1322.77202"	"-0.65"	"-0.00043"	"5/54"	"5"	"54"	"303106.903137207"	"HCD"	"MS2"	"32.0936"	"27.2"	"100.000"	"70.3730"	"23590"	"23590"	"23566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"33.0"	""	"38.8"	""	"42.7"	""	"54.4"	"58.8"	""	"671"	"16"	"35.000"	"28.000"	"0.924043729969954"	"24"	"0.006423"	"0.08025"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"441.59531"	"1322.77137"	"1322.77202"	"-0.50"	"-0.00022"	"6/58"	"6"	"58"	"727902.458251953"	"HCD"	"MS2"	"33.51747"	"35.2"	"100.000"	"71.0752"	"23907"	"23907"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"49.2"	""	"50.2"	""	"56.9"	""	"61.4"	"76.2"	""	"671"	"31"	"35.000"	"28.000"	"0.0268344392554858"	"17"	"0.0001991"	"0.004077"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"441.59534"	"1322.77146"	"1322.77202"	"-0.43"	"-0.00019"	"6/58"	"6"	"58"	"1513671.55743408"	"HCD"	"MS2"	"15.68628"	"65.9"	"100.000"	"71.3633"	"24023"	"24023"	"24005"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.9"	""	"87.1"	""	"84.3"	""	"103.0"	""	"120.6"	"137.8"	""	"679"	"40"	"35.000"	"28.000"	"0.00331772036514497"	"24"	"9.9E-05"	"0.0005616"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFEEAAK"	"[K].gLFEEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"661.88947"	"1322.77165"	"1322.77202"	"-0.28"	"-0.00018"	"14/58"	"14"	"58"	"604180.346313477"	"HCD"	"MS2"	"9.542671"	"59.0"	"100.000"	"74.8360"	"25400"	"25400"	"25375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.0"	""	"69.1"	"2.2"	"84.5"	""	"93.3"	"1.6"	"113.5"	"121.3"	""	"671"	"47"	"35.000"	"28.000"	"0.000674050638630228"	""	"0"	"0.0003439"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"661.88953"	"1322.77178"	"1322.77202"	"-0.19"	"-0.00012"	"6/58"	"6"	"58"	"1811204.35540771"	"HCD"	"MS2"	"26.47235"	"153.1"	"100.000"	"71.7160"	"24136"	"24136"	"24116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"243.3"	""	"239.6"	""	"207.6"	""	"271.8"	"0.8"	"252.7"	"231.2"	""	"671"	"13"	"35.000"	"28.000"	"1.66223539015007"	"18"	"0.0007053"	"0.00724"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"661.88953"	"1322.77178"	"1322.77202"	"-0.19"	"-0.00012"	"7/58"	"7"	"58"	"8144192.2880249"	"HCD"	"MS2"	"0"	"598.9"	"100.000"	"71.1035"	"23887"	"23887"	"23870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"836.1"	""	"870.6"	""	"854.8"	""	"898.0"	""	"1072.4"	"1143.0"	""	"671"	"47"	"35.000"	"28.000"	"0.000702574728937974"	"20"	"0.0001686"	"0.001839"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"661.88953"	"1322.77178"	"1322.77202"	"-0.19"	"-0.00012"	"12/58"	"12"	"58"	"7660695.04766846"	"HCD"	"MS2"	"0"	"562.4"	"100.000"	"71.2184"	"23965"	"23965"	"23948"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"783.7"	""	"784.9"	""	"788.7"	""	"891.4"	""	"1000.0"	"1081.8"	""	"671"	"41"	"35.000"	"28.000"	"0.00261633002080553"	"19"	"0.0001991"	"0.002805"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"661.88959"	"1322.77190"	"1322.77202"	"-0.09"	"-0.00006"	"7/58"	"7"	"58"	"3686303.30853271"	"HCD"	"MS2"	"0"	"285.8"	"100.000"	"71.4027"	"24008"	"24008"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"376.7"	""	"380.7"	""	"413.5"	""	"444.2"	""	"525.9"	"573.2"	""	"671"	"47"	"35.000"	"28.000"	"0.00071893979667578"	"23"	"0.0001686"	"0.001229"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLFEEAAK"	"[K].gLFEEAAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"661.88971"	"1322.77214"	"1322.77202"	"0.09"	"0.00006"	"7/58"	"7"	"58"	"703846.739929199"	"HCD"	"MS2"	"15.52623"	"64.9"	"100.000"	"75.0261"	"25508"	"25508"	"25488"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"76.4"	""	"76.4"	""	"126.9"	"1.1"	"133.3"	"127.7"	""	"673"	"46"	"35.000"	"28.000"	"0.000897397940611478"	"27"	"0"	"0.0003267"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"661.88971"	"1322.77214"	"1322.77202"	"0.09"	"0.00006"	"7/58"	"7"	"58"	"532506.266540527"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"70.7945"	"23761"	"23761"	"23739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.0"	""	"65.6"	""	"58.9"	""	"80.8"	"1.2"	"82.0"	"89.5"	""	"673"	"43"	"35.000"	"28.000"	"0.00151350921171591"	"20"	"0"	"0.0003034"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"661.88971"	"1322.77214"	"1322.77202"	"0.09"	"0.00006"	"7/58"	"7"	"58"	"3389464.34649658"	"HCD"	"MS2"	"0"	"254.4"	"100.000"	"71.5039"	"24081"	"24081"	"24064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"340.6"	""	"339.8"	""	"370.8"	""	"393.4"	""	"451.5"	"516.0"	""	"673"	"47"	"35.000"	"28.000"	"0.000717769613273823"	"20"	"0.0001686"	"0.001337"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"661.88983"	"1322.77239"	"1322.77202"	"0.27"	"0.00018"	"12/58"	"12"	"58"	"765999.60534668"	"HCD"	"MS2"	"9.766651"	"68.6"	"100.000"	"70.9253"	"23846"	"23846"	"23829"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.4"	""	"100.6"	""	"86.1"	""	"117.7"	""	"115.4"	"125.3"	""	"671"	"37"	"35.000"	"28.000"	"0.00722258272000026"	"17"	"9.9E-05"	"0.0005604"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAGFK"	"[K].aLEEAGFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"3"	"661.89001"	"1322.77275"	"1322.77202"	"0.55"	"0.00036"	"10/58"	"10"	"58"	"1658094.98760986"	"HCD"	"MS2"	"25.39396"	"135.0"	"100.000"	"71.8098"	"24205"	"24205"	"24187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.2"	""	"204.7"	""	"167.2"	""	"231.9"	""	"227.2"	"225.6"	""	"671"	"11"	"35.000"	"28.000"	"2.68344392554858"	"19"	"0.0005778"	"0.007162"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEAVK"	"[R].rFDEAVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"441.59857"	"1322.78116"	"1322.78326"	"-1.58"	"-0.00070"	"4/62"	"4"	"62"	"7880936.46160889"	"HCD"	"MS2"	"37.86756"	"452.8"	"100.000"	"38.9210"	"10827"	"10827"	"10797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"671.1"	""	"608.7"	""	"609.0"	""	"692.5"	""	"830.9"	"883.9"	""	"587"	"16"	"34.000"	"27.000"	"0.720457066753556"	"17"	"0.006613"	"0.08248"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEAVK"	"[R].rFDEAVk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"441.59891"	"1322.78217"	"1322.78326"	"-0.82"	"-0.00036"	"8/62"	"8"	"62"	"7892488.58239746"	"HCD"	"MS2"	"35.08966"	"455.2"	"100.000"	"38.8336"	"10827"	"10827"	"10800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"683.7"	""	"607.6"	""	"596.2"	""	"693.3"	""	"864.1"	"873.6"	""	"620"	"14"	"34.000"	"27.000"	"1.36572007687031"	"17"	"0.006814"	"0.08483"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"662.34003"	"1323.67278"	"1323.67421"	"-1.08"	"-0.00072"	"7/84"	"7"	"84"	"1115984.71697998"	"HCD"	"MS2"	"35.30128"	"87.5"	"100.000"	"57.4238"	"18367"	"18367"	"18341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.2"	""	"98.8"	""	"112.6"	""	"155.5"	""	"189.2"	"182.9"	""	"669"	"27"	"35.000"	"28.000"	"0.0670495893153646"	"22"	"0"	"0.0003894"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"662.34076"	"1323.67424"	"1323.67421"	"0.02"	"0.00002"	"7/84"	"7"	"84"	"850343.072753906"	"HCD"	"MS2"	"17.91992"	"65.5"	"100.000"	"57.7299"	"18492"	"18492"	"18466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.4"	""	"73.7"	""	"80.7"	""	"126.4"	"0.7"	"135.4"	"131.3"	""	"691"	"38"	"35.000"	"28.000"	"0.00578692763667135"	"28"	"0.0001686"	"0.001557"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"662.34076"	"1323.67424"	"1323.67421"	"0.02"	"0.00002"	"6/84"	"6"	"84"	"721589.97479248"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"58.0822"	"18600"	"18600"	"18578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.3"	""	"66.7"	""	"73.3"	""	"112.6"	""	"124.6"	"124.1"	""	"691"	"24"	"35.000"	"28.000"	"0.123153866598767"	"18"	"0.0001991"	"0.002373"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIR"	"[K].eDAFQDTIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"662.34076"	"1323.67424"	"1323.67421"	"0.02"	"0.00002"	"7/84"	"7"	"84"	"1123711.70080566"	"HCD"	"MS2"	"14.75831"	"81.6"	"100.000"	"57.7807"	"18477"	"18477"	"18455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.7"	""	"86.7"	""	"115.5"	""	"157.6"	""	"175.5"	"152.5"	""	"691"	"31"	"35.000"	"28.000"	"0.0256122688369467"	"20"	"9.9E-05"	"0.0004618"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"662.35132"	"1323.69536"	"1323.69787"	"-1.90"	"-0.00126"	"12/72"	"12"	"72"	"2008185.53521729"	"HCD"	"MS2"	"0"	"168.7"	"100.000"	"30.0012"	"7223"	"7223"	"7203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"296.3"	""	"231.7"	""	"240.5"	""	"181.6"	"1.9"	"320.1"	"325.4"	""	"787"	"33"	"35.000"	"28.000"	"0.0199960740647581"	"17"	"0.0001686"	"0.001794"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"662.35229"	"1323.69731"	"1323.69787"	"-0.42"	"-0.00028"	"6/72"	"6"	"72"	"923238.455505371"	"HCD"	"MS2"	"0"	"82.6"	"100.000"	"30.1309"	"7315"	"7315"	"7295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.2"	""	"105.9"	""	"119.8"	""	"90.8"	""	"155.4"	"170.5"	""	"809"	"30"	"36.000"	"29.000"	"0.0384519639033966"	"18"	"0.0001686"	"0.001471"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"662.35242"	"1323.69756"	"1323.69787"	"-0.24"	"-0.00016"	"6/72"	"6"	"72"	"809940.317260742"	"HCD"	"MS2"	"9.763647"	"71.8"	"100.000"	"30.2972"	"7342"	"7342"	"7322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.3"	""	"92.1"	""	"86.3"	""	"87.4"	""	"139.3"	"158.6"	""	"801"	"30"	"36.000"	"29.000"	"0.0412669641236867"	"17"	"0.00192"	"0.01622"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TMADGNEK"	"[K].tMADGNEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"662.35345"	"1323.69963"	"1323.69787"	"1.33"	"0.00088"	"6/72"	"6"	"72"	"1596135.34887695"	"HCD"	"MS2"	"0"	"136.8"	"100.000"	"29.8349"	"7196"	"7196"	"7174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.9"	""	"187.2"	""	"196.0"	""	"143.8"	""	"255.6"	"273.6"	""	"804"	"37"	"36.000"	"29.000"	"0.007572269339749"	"19"	"9.9E-05"	"0.001005"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQIESDR"	"[K].fLSQIESDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"662.35864"	"1323.71001"	"1323.71060"	"-0.44"	"-0.00029"	"11/84"	"11"	"84"	"718714.187561035"	"HCD"	"MS2"	"4.500716"	"46.8"	"100.000"	"83.2548"	"28810"	"28810"	"28791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.5"	""	"58.3"	""	"65.8"	""	"67.8"	""	"88.0"	"95.7"	""	"841"	"43"	"36.000"	"29.000"	"0.00236464527242542"	""	"0"	"0.0001512"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTADGTFLVR"	"[R].dTADGTFLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"662.35931"	"1323.71135"	"1323.71060"	"0.57"	"0.00038"	"7/82"	"7"	"82"	"430640.973815918"	"HCD"	"MS2"	"25.18132"	"39.0"	"100.000"	"65.2571"	"21548"	"21548"	"21520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.6"	""	"40.3"	""	"47.6"	""	"75.3"	"1.7"	"72.5"	"82.0"	""	"828"	"25"	"36.000"	"29.000"	"0.130918295130971"	"17"	"0.0001686"	"0.001084"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQIESDR"	"[K].fLSQIESDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"662.35931"	"1323.71135"	"1323.71060"	"0.57"	"0.00038"	"6/84"	"6"	"84"	"1221806.98071289"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"83.4730"	"28927"	"28927"	"28909"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.7"	""	"89.0"	""	"88.7"	""	"102.9"	""	"117.2"	"122.5"	""	"828"	"45"	"36.000"	"29.000"	"0.00133659656638903"	""	"0"	"0.0001959"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLSQIESDR"	"[K].fLSQIESDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.5676"	"0.0000"	"1"	"1"	"1"	"662.35980"	"1323.71233"	"1323.71060"	"1.31"	"0.00087"	"7/84"	"7"	"84"	"397241.157104492"	"HCD"	"MS2"	"21.1046"	"28.2"	"100.000"	"83.1712"	"28805"	"28805"	"28780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"31.8"	""	"38.3"	""	"46.2"	""	"54.0"	"54.8"	""	"812"	"37"	"36.000"	"29.000"	"0.00787999666302669"	""	"0.0001991"	"0.003656"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].QNEGFSLTAk.[G]"	"K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"662.35980"	"1323.71233"	"1323.71060"	"1.31"	"0.00087"	"7/100"	"7"	"100"	"813125.831604004"	"HCD"	"MS2"	"44.38215"	"49.8"	"100.000"	"56.2433"	"17855"	"17855"	"17836"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"55.5"	""	"59.7"	""	"87.8"	""	"115.5"	"104.5"	""	"812"	"31"	"36.000"	"29.000"	"0.0340036888543514"	"15"	"0.0009352"	"0.007981"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTADGTFLVR"	"[R].dTADGTFLVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"Q63787"	"Phosphatidylinositol 3-kinase regulatory subunit alpha OS=Rattus norvegicus OX=10116 GN=Pik3r1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"662.36035"	"1323.71343"	"1323.71060"	"2.14"	"0.00142"	"7/82"	"7"	"82"	"520419.509277344"	"HCD"	"MS2"	"28.69134"	"43.9"	"100.000"	"65.3344"	"21546"	"21546"	"21519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"52.8"	""	"54.1"	""	"78.7"	"1.5"	"88.9"	"83.9"	""	"809"	"34"	"36.000"	"29.000"	"0.0162150587280244"	"20"	"9.9E-05"	"0.0005215"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAIGDYLGER"	"[K].tAIGDYLGER.[ED]"	"N-Term(TMT6plex)"	"1"	"2"	"P63035"	"Cytohesin-2 OS=Rattus norvegicus OX=10116 GN=Cyth2 PE=1 SV=1"	"P63035; P97694"	"Cytohesin-2 OS=Rattus norvegicus OX=10116 GN=Cyth2 PE=1 SV=1; Cytohesin-1 OS=Rattus norvegicus OX=10116 GN=Cyth1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.36096"	"1323.71465"	"1323.71060"	"3.06"	"0.00203"	"7/88"	"7"	"88"	"451117.20892334"	"HCD"	"MS2"	"47.31258"	"41.8"	"100.000"	"76.5600"	"26101"	"26101"	"26077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.6"	""	"53.9"	""	"52.6"	""	"65.6"	""	"83.9"	"83.9"	""	"815"	"26"	"36.000"	"29.000"	"0.111976686738923"	"14"	"0.0001991"	"0.004238"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSGGGGGTGK"	"[R].tSSGGGGGTGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8K3M6"	"ERC protein 2 OS=Rattus norvegicus OX=10116 GN=Erc2 PE=1 SV=1"	"Q8K3M6"	"ERC protein 2 OS=Rattus norvegicus OX=10116 GN=Erc2 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"662.36713"	"1323.72698"	"1323.72686"	"0.08"	"0.00006"	"7/96"	"7"	"96"	"289485.928039551"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"20.4739"	"3463"	"3463"	"3445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"20.5"	""	"22.3"	""	"44.1"	"1.2"	"67.3"	"65.2"	""	"804"	"19"	"36.000"	"29.000"	"0.476679036763198"	"22"	"0.008758"	"0.111"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTENMK"	"[K].vGSTENMk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"662.37024"	"1323.73320"	"1323.73426"	"-0.80"	"-0.00053"	"7/64"	"7"	"64"	"1282652.58880615"	"HCD"	"MS2"	"0"	"103.3"	"100.000"	"38.4959"	"10653"	"10653"	"10626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.1"	""	"107.5"	""	"120.2"	""	"199.9"	""	"245.7"	"203.8"	""	"824"	"24"	"36.000"	"29.000"	"0.147535732086286"	"29"	"0.0001991"	"0.003341"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTENMK"	"[K].vGSTENMk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"662.37054"	"1323.73381"	"1323.73426"	"-0.34"	"-0.00022"	"6/64"	"6"	"64"	"1296793.68969727"	"HCD"	"MS2"	"0"	"104.4"	"100.000"	"38.3809"	"10642"	"10642"	"10612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.9"	""	"116.4"	""	"103.3"	""	"202.1"	"1.0"	"263.6"	"199.6"	""	"823"	"25"	"36.000"	"29.000"	"0.141374095560798"	"28"	"0.0001991"	"0.003665"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLVGDLHGR"	"[R].dLLVGDLHGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"441.92438"	"1323.75858"	"1323.75822"	"0.28"	"0.00012"	"12/82"	"12"	"82"	"1058472.4473877"	"HCD"	"MS2"	"49.26821"	"42.3"	"100.000"	"59.8382"	"19316"	"19316"	"19290"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"56.6"	""	"63.1"	""	"72.3"	"0.6"	"88.4"	"71.9"	""	"706"	"19"	"35.000"	"28.000"	"0.415694908652845"	"25"	"9.9E-05"	"0.0007606"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLVGDLHGR"	"[R].dLLVGDLHGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"441.92477"	"1323.75977"	"1323.75822"	"1.17"	"0.00052"	"9/82"	"9"	"82"	"1031663.59814453"	"HCD"	"MS2"	"57.84019"	"42.2"	"100.000"	"59.6747"	"19283"	"19283"	"19259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"54.6"	""	"62.2"	""	"67.3"	""	"85.8"	"86.7"	""	"692"	"20"	"35.000"	"28.000"	"0.330427434763417"	"27"	"0.0001991"	"0.003259"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLVGDLHGR"	"[R].dLLVGDLHGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"441.92502"	"1323.76050"	"1323.75822"	"1.73"	"0.00076"	"9/82"	"9"	"82"	"724405.27355957"	"HCD"	"MS2"	"55.75967"	"32.4"	"100.000"	"60.1446"	"19474"	"19474"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"39.6"	""	"42.2"	""	"57.2"	"0.4"	"67.1"	"63.4"	""	"688"	"18"	"35.000"	"28.000"	"0.500677923720196"	"26"	"0.0001991"	"0.003654"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLYEEAK"	"[R].lLYEEAk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2R3"	"FERM domain-containing protein 8 OS=Rattus norvegicus OX=10116 GN=Frmd8 PE=1 SV=1"	"Q5U2R3"	"FERM domain-containing protein 8 OS=Rattus norvegicus OX=10116 GN=Frmd8 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"662.39886"	"1323.79045"	"1323.79242"	"-1.49"	"-0.00099"	"6/50"	"6"	"50"	"549514.61907959"	"HCD"	"MS2"	"39.0285"	"50.9"	"100.000"	"74.6977"	"25344"	"25344"	"25325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.2"	""	"52.8"	""	"56.1"	""	"88.0"	""	"113.3"	"109.0"	""	"521"	"28"	"34.000"	"27.000"	"0.0444434462335314"	"24"	"0.0001991"	"0.005467"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELAYLK"	"[K].eELAYLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"4"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"662.39948"	"1323.79167"	"1323.79242"	"-0.57"	"-0.00038"	"12/50"	"12"	"50"	"463201.878295898"	"HCD"	"MS2"	"26.53123"	"43.9"	"100.000"	"84.8192"	"29441"	"29441"	"29427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"28.7"	""	"48.8"	""	"88.8"	""	"101.5"	"113.5"	""	"515"	"34"	"34.000"	"27.000"	"0.00992606770989362"	""	"0.0001686"	"0.001563"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELAYLK"	"[K].eELAYLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"4"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"662.39954"	"1323.79180"	"1323.79242"	"-0.47"	"-0.00031"	"12/50"	"12"	"50"	"394080.334716797"	"HCD"	"MS2"	"25.30093"	"36.6"	"100.000"	"84.8137"	"29468"	"29468"	"29449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.7"	""	"36.7"	""	"38.4"	""	"53.9"	""	"82.5"	"99.0"	""	"515"	"35"	"34.000"	"27.000"	"0.00739225999871357"	""	"0.0001991"	"0.002149"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELAYLK"	"[K].eELAYLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"4"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"662.39954"	"1323.79180"	"1323.79242"	"-0.47"	"-0.00031"	"12/50"	"12"	"50"	"2244330.3704834"	"HCD"	"MS2"	"1.531445"	"183.0"	"100.000"	"85.1168"	"29561"	"29561"	"29543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.1"	""	"158.5"	""	"187.1"	""	"295.5"	""	"446.4"	"514.8"	""	"515"	"36"	"34.000"	"27.000"	"0.00632087545788895"	""	"0.001049"	"0.00878"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELAYLK"	"[K].eELAYLk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"4"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3056"	"0.0000"	"1"	"1"	"1"	"662.39978"	"1323.79228"	"1323.79242"	"-0.11"	"-0.00007"	"12/50"	"12"	"50"	"2213062.6842041"	"HCD"	"MS2"	"0"	"169.9"	"100.000"	"85.1140"	"29590"	"29590"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.6"	""	"132.4"	""	"167.5"	""	"295.0"	""	"398.0"	"477.0"	""	"501"	"36"	"33.000"	"26.000"	"0.00600907646214383"	""	"0.0001991"	"0.005021"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEWYAR"	"[K].eLEEWYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"662.84027"	"1324.67327"	"1324.67348"	"-0.16"	"-0.00011"	"6/62"	"6"	"62"	"1054019.99835205"	"HCD"	"MS2"	"15.86594"	"65.7"	"100.000"	"81.5973"	"28142"	"28142"	"28128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.9"	""	"79.1"	""	"79.5"	""	"92.5"	""	"138.0"	"133.9"	""	"606"	"31"	"34.000"	"27.000"	"0.0262085279389035"	"21"	"0.0001686"	"0.001951"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEWYAR"	"[K].eLEEWYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"P08081"	"Clathrin light chain A OS=Rattus norvegicus OX=10116 GN=Clta PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"662.84027"	"1324.67327"	"1324.67348"	"-0.16"	"-0.00011"	"6/62"	"6"	"62"	"1589497.12268066"	"HCD"	"MS2"	"11.1613"	"86.6"	"100.000"	"81.5648"	"28156"	"28156"	"28140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.9"	""	"104.9"	""	"96.2"	""	"142.7"	""	"178.4"	"185.5"	""	"606"	"36"	"34.000"	"27.000"	"0.00762856109110932"	"22"	"0.0001991"	"0.002519"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMTDESGK"	"[K].vMTDESGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"662.86176"	"1324.71623"	"1324.71827"	"-1.54"	"-0.00102"	"7/62"	"7"	"62"	"1901157.51727295"	"HCD"	"MS2"	"9.717156"	"148.6"	"100.000"	"40.3700"	"11412"	"11412"	"11389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.0"	""	"166.9"	""	"182.3"	""	"228.3"	"0.1"	"300.8"	"298.7"	""	"735"	"48"	"35.000"	"28.000"	"0.000521503639220742"	"20"	"9.9E-05"	"0.0009861"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMTDESGK"	"[K].vMTDESGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"662.86200"	"1324.71672"	"1324.71827"	"-1.17"	"-0.00078"	"7/62"	"7"	"62"	"469010.840026855"	"HCD"	"MS2"	"11.09071"	"50.1"	"100.000"	"40.5799"	"11532"	"11532"	"11509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.7"	""	"55.6"	""	"66.1"	""	"85.1"	"1.7"	"95.6"	"94.8"	""	"740"	"42"	"35.000"	"28.000"	"0.00232381592760927"	"19"	"0.002525"	"0.02381"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMTDESGK"	"[K].vMTDESGk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.86237"	"1324.71745"	"1324.71827"	"-0.62"	"-0.00041"	"7/62"	"7"	"62"	"2001378.47821045"	"HCD"	"MS2"	"11.68185"	"158.4"	"100.000"	"40.2788"	"11409"	"11409"	"11386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.5"	""	"164.9"	""	"197.2"	""	"243.3"	""	"322.6"	"323.0"	""	"740"	"49"	"35.000"	"28.000"	"0.000522638891510419"	"16"	"9.9E-05"	"0.0008766"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"662.87836"	"1324.74944"	"1324.75129"	"-1.40"	"-0.00093"	"5/62"	"5"	"62"	"668088.070922852"	"HCD"	"MS2"	"14.08405"	"64.8"	"100.000"	"52.8987"	"16496"	"16496"	"16475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.8"	""	"82.2"	""	"75.5"	""	"106.1"	""	"140.8"	"127.3"	""	"685"	"14"	"35.000"	"28.000"	"1.33247962160541"	"26"	"0.002189"	"0.02039"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLSFQK"	"[R].eDLSFQk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"662.87872"	"1324.75017"	"1324.75129"	"-0.84"	"-0.00056"	"6/56"	"6"	"56"	"242977.05456543"	"HCD"	"MS2"	"21.09385"	"27.2"	"100.000"	"69.1996"	"23147"	"23147"	"23120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"32.1"	""	"33.2"	""	"38.2"	""	"63.2"	"57.2"	""	"683"	"19"	"35.000"	"28.000"	"0.388499718108702"	"26"	"0.002628"	"0.0278"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLSFQK"	"[R].eDLSFQk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"P50545"	"Tyrosine-protein kinase HCK OS=Rattus norvegicus OX=10116 GN=Hck PE=1 SV=4"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"662.87872"	"1324.75017"	"1324.75129"	"-0.84"	"-0.00056"	"8/56"	"8"	"56"	"307933.899658203"	"HCD"	"MS2"	"44.15422"	"28.1"	"100.000"	"69.1059"	"23075"	"23075"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.9"	""	"31.4"	""	"33.5"	""	"50.0"	""	"55.5"	"56.5"	""	"683"	"12"	"35.000"	"28.000"	"1.9787489982978"	"24"	"0.005266"	"0.06621"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"662.87909"	"1324.75090"	"1324.75129"	"-0.29"	"-0.00019"	"6/62"	"6"	"62"	"1909350.75360107"	"HCD"	"MS2"	"0"	"172.7"	"100.000"	"52.7469"	"16434"	"16434"	"16416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.1"	""	"183.6"	""	"201.6"	""	"296.7"	""	"360.7"	"401.6"	""	"689"	"31"	"35.000"	"28.000"	"0.026927077868068"	"26"	"0.002035"	"0.01822"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"662.87927"	"1324.75127"	"1324.75129"	"-0.01"	"-0.00001"	"12/62"	"12"	"62"	"2825162.44970703"	"HCD"	"MS2"	"4.173829"	"228.9"	"100.000"	"52.1045"	"16206"	"16206"	"16187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.6"	""	"275.8"	""	"265.1"	""	"405.8"	""	"461.5"	"463.0"	""	"670"	"37"	"35.000"	"28.000"	"0.00662284829437473"	"28"	"0.001615"	"0.01398"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"662.87946"	"1324.75163"	"1324.75129"	"0.26"	"0.00017"	"10/62"	"10"	"62"	"2122041.57928467"	"HCD"	"MS2"	"1.464894"	"186.2"	"100.000"	"52.3996"	"16327"	"16327"	"16310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.3"	""	"198.3"	""	"210.9"	""	"313.2"	""	"401.9"	"413.4"	""	"672"	"24"	"35.000"	"28.000"	"0.147685982787109"	"25"	"0.002462"	"0.02324"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYEEIAK"	"[K].nYEEIAk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"Q63584"	"Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Tmed10 PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"662.87946"	"1324.75163"	"1324.75129"	"0.26"	"0.00017"	"12/62"	"12"	"62"	"2964784.83935547"	"HCD"	"MS2"	"6.915898"	"238.2"	"100.000"	"52.4477"	"16312"	"16312"	"16291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.7"	""	"269.4"	""	"265.3"	""	"418.3"	""	"495.9"	"511.9"	""	"672"	"37"	"35.000"	"28.000"	"0.00653640987425214"	"28"	"0.001827"	"0.01535"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAYQTGK"	"[K].aQAYQTGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"662.88403"	"1324.76079"	"1324.76252"	"-1.31"	"-0.00087"	"7/68"	"7"	"68"	"2110887.57366943"	"HCD"	"MS2"	"48.63346"	"144.3"	"100.000"	"31.8987"	"7982"	"7982"	"7953"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.3"	""	"191.7"	""	"216.7"	""	"189.0"	""	"236.4"	"250.2"	""	"591"	"31"	"34.000"	"27.000"	"0.0243532812986342"	"16"	"0.0001686"	"0.001951"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAYQTGK"	"[K].aQAYQTGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"662.88446"	"1324.76164"	"1324.76252"	"-0.66"	"-0.00044"	"7/68"	"7"	"68"	"1929268.82531738"	"HCD"	"MS2"	"25.11319"	"129.8"	"100.000"	"32.1945"	"8099"	"8099"	"8082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"238.1"	""	"179.2"	""	"187.2"	""	"171.5"	""	"219.6"	"232.7"	""	"672"	"29"	"35.000"	"28.000"	"0.0438873418412299"	"17"	"0.0001991"	"0.00284"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAYQTGK"	"[K].aQAYQTGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"662.88452"	"1324.76177"	"1324.76252"	"-0.57"	"-0.00038"	"7/68"	"7"	"68"	"2855164.78607178"	"HCD"	"MS2"	"25.88053"	"192.0"	"100.000"	"31.8183"	"7986"	"7986"	"7967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.3"	""	"251.9"	""	"275.7"	""	"250.8"	"1.3"	"315.5"	"328.8"	""	"672"	"31"	"35.000"	"28.000"	"0.0247365584758231"	"17"	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAYQTGK"	"[K].aQAYQTGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"662.88477"	"1324.76225"	"1324.76252"	"-0.20"	"-0.00013"	"7/68"	"7"	"68"	"1652147.89227295"	"HCD"	"MS2"	"29.70953"	"103.3"	"100.000"	"32.1071"	"8101"	"8101"	"8083"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.3"	""	"136.9"	""	"146.9"	""	"127.5"	""	"183.8"	"189.3"	""	"663"	"24"	"35.000"	"28.000"	"0.12986243226123"	"16"	"0.0001991"	"0.003416"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVYTEIK"	"[K].nVYTEIk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P29994"	"Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2"	"Q63269; P29995; P29994"	"Inositol 1,4,5-trisphosphate receptor type 3 OS=Rattus norvegicus OX=10116 GN=Itpr3 PE=1 SV=1; Inositol 1,4,5-trisphosphate receptor type 2 OS=Rattus norvegicus OX=10116 GN=Itpr2 PE=1 SV=1; Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"662.89667"	"1324.78606"	"1324.78767"	"-1.22"	"-0.00081"	"6/62"	"6"	"62"	"431582.159667969"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"60.9780"	"19780"	"19780"	"19757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.3"	""	"45.1"	""	"52.4"	""	"62.8"	""	"86.7"	"76.1"	""	"491"	"34"	"33.000"	"26.000"	"0.0109408608981587"	"22"	"0.0001991"	"0.00474"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVYTEIK"	"[K].nVYTEIk.[C]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"3"	"P29994"	"Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2"	"Q63269; P29995; P29994"	"Inositol 1,4,5-trisphosphate receptor type 3 OS=Rattus norvegicus OX=10116 GN=Itpr3 PE=1 SV=1; Inositol 1,4,5-trisphosphate receptor type 2 OS=Rattus norvegicus OX=10116 GN=Itpr2 PE=1 SV=1; Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"662.89764"	"1324.78801"	"1324.78767"	"0.26"	"0.00017"	"6/62"	"6"	"62"	"397288.719482422"	"HCD"	"MS2"	"37.29349"	"37.8"	"100.000"	"60.8398"	"19756"	"19756"	"19730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.0"	""	"44.3"	""	"49.1"	""	"65.4"	""	"74.0"	"76.6"	""	"471"	"32"	"33.000"	"26.000"	"0.0157394992587409"	"21"	"0.0001991"	"0.003281"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLVLEQGLR"	"[K].aPLVLEQGLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"662.91113"	"1324.81499"	"1324.81500"	"-0.01"	"-0.00001"	"9/78"	"9"	"78"	"434903.858764648"	"HCD"	"MS2"	"28.57055"	"19.3"	"100.000"	"91.4616"	"32146"	"32146"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.9"	""	"29.6"	""	"27.0"	""	"30.8"	""	"34.1"	"36.7"	""	"258"	"35"	"31.000"	"24.000"	"0.00384228619396365"	"18"	"0"	"2.229E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDTVGSDAYR"	"[R].lDTVGSDAYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"663.34845"	"1325.68962"	"1325.68986"	"-0.18"	"-0.00012"	"8/82"	"8"	"82"	"1213494.9473877"	"HCD"	"MS2"	"37.74914"	"76.7"	"100.000"	"53.6007"	"16817"	"16817"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.4"	""	"104.7"	""	"117.0"	""	"106.0"	""	"149.4"	"159.2"	""	"647"	"36"	"35.000"	"28.000"	"0.00772456950022414"	"22"	"0"	"3.038E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDTVGSDAYR"	"[R].lDTVGSDAYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"663.34851"	"1325.68974"	"1325.68986"	"-0.09"	"-0.00006"	"8/82"	"8"	"82"	"722597.534240723"	"HCD"	"MS2"	"25.94296"	"57.8"	"100.000"	"53.9230"	"16948"	"16948"	"16926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.0"	""	"70.2"	""	"80.4"	""	"80.8"	""	"119.3"	"118.6"	""	"647"	"36"	"35.000"	"28.000"	"0.00823899586711262"	"23"	"0"	"0.0002566"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDTVGSDAYR"	"[R].lDTVGSDAYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"663.34851"	"1325.68974"	"1325.68986"	"-0.09"	"-0.00006"	"8/82"	"8"	"82"	"932213.577697754"	"HCD"	"MS2"	"14.66686"	"64.0"	"100.000"	"54.2083"	"17031"	"17031"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.1"	""	"81.4"	""	"87.2"	""	"97.4"	"0.2"	"126.7"	"124.3"	""	"647"	"36"	"35.000"	"28.000"	"0.0081072634335589"	"18"	"9.9E-05"	"0.0005118"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDTVGSDAYR"	"[R].lDTVGSDAYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"Q62786"	"Prostaglandin F2 receptor negative regulator OS=Rattus norvegicus OX=10116 GN=Ptgfrn PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"663.34851"	"1325.68974"	"1325.68986"	"-0.09"	"-0.00006"	"8/82"	"8"	"82"	"1167615.02789307"	"HCD"	"MS2"	"35.33419"	"82.5"	"100.000"	"53.9113"	"16910"	"16910"	"16889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.9"	""	"98.7"	""	"110.5"	""	"112.7"	""	"176.9"	"166.3"	""	"647"	"33"	"35.000"	"28.000"	"0.0179835027226976"	"20"	"0"	"0.0002882"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEGQQK"	"[K].dYEGQQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"663.35858"	"1325.70989"	"1325.71015"	"-0.20"	"-0.00013"	"10/56"	"10"	"56"	"592715.559204102"	"HCD"	"MS2"	"100"	"57.7"	"100.000"	"29.5507"	"7082"	"7082"	"7060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.4"	"2.7"	"63.5"	""	"42.6"	""	"114.5"	""	"143.0"	"86.6"	""	"595"	"11"	"34.000"	"27.000"	"2.39600086256723"	"18"	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEGQQK"	"[K].dYEGQQk.[Q]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"663.35876"	"1325.71025"	"1325.71015"	"0.08"	"0.00005"	"10/56"	"10"	"56"	"992997.395202637"	"HCD"	"MS2"	"0"	"84.0"	"100.000"	"29.7308"	"7115"	"7115"	"7092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"76.9"	""	"62.7"	""	"182.6"	"0.6"	"184.1"	"145.0"	""	"597"	"23"	"34.000"	"27.000"	"0.164416097377013"	""	"0.001615"	"0.01481"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNNHMAK"	"[K].hNNHmAk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"442.57596"	"1325.71332"	"1325.71486"	"-1.16"	"-0.00051"	"9/60"	"9"	"60"	"2503621.22412109"	"HCD"	"MS2"	"8.322164"	"129.1"	"100.000"	"18.4782"	"2695"	"2695"	"2689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"270.1"	""	"74.5"	""	"79.4"	""	"51.1"	""	"44.8"	"711.0"	""	"610"	"22"	"34.000"	"27.000"	"0.215923464237162"	"14"	"0.006577"	"0.08183"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNNHMAK"	"[K].hNNHmAk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K7(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"442.57620"	"1325.71405"	"1325.71486"	"-0.61"	"-0.00027"	"5/60"	"5"	"60"	"2353003.9644165"	"HCD"	"MS2"	"7.528769"	"116.3"	"100.000"	"18.4513"	"2724"	"2724"	"2720"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.9"	""	"64.4"	""	"66.3"	""	"38.1"	""	"34.5"	"664.9"	""	"605"	"18"	"34.000"	"27.000"	"0.441291313733293"	"14"	"0.003317"	"0.03616"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEDPLPGR"	"[K].iLSEDPLPGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI01"	"La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2"	"Q5XI01"	"La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.38458"	"1325.76189"	"1325.76263"	"-0.56"	"-0.00037"	"9/76"	"9"	"76"	"271467.758911133"	"HCD"	"MS2"	"21.49378"	"14.0"	"100.000"	"87.2337"	"30409"	"30409"	"30391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"16.6"	""	"15.8"	""	"23.3"	""	"32.4"	"29.8"	""	"546"	"11"	"34.000"	"27.000"	"2.00061097546921"	"13"	"0.0009352"	"0.008402"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEDPLPGR"	"[K].iLSEDPLPGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI01"	"La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2"	"Q5XI01"	"La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.38495"	"1325.76262"	"1325.76263"	"-0.01"	"-0.00001"	"11/76"	"11"	"76"	"339692.892822266"	"HCD"	"MS2"	"26.6341"	"15.5"	"100.000"	"87.2906"	"30466"	"30466"	"30444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"19.2"	""	"21.7"	""	"25.1"	""	"29.8"	"36.4"	""	"549"	"28"	"34.000"	"27.000"	"0.0460831702974642"	"14"	"0"	"0.0003974"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEDPLPGR"	"[K].iLSEDPLPGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI01"	"La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2"	"Q5XI01"	"La-related protein 7 OS=Rattus norvegicus OX=10116 GN=Larp7 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"663.38531"	"1325.76335"	"1325.76263"	"0.54"	"0.00036"	"6/76"	"6"	"76"	"236938.792480469"	"HCD"	"MS2"	"11.89417"	"10.9"	"100.000"	"87.5314"	"30528"	"30528"	"30508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.8"	""	"15.1"	""	"14.1"	""	"19.8"	""	"21.3"	"21.5"	""	"547"	"33"	"34.000"	"27.000"	"0.0123014790313314"	"24"	"0.0001991"	"0.002288"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEEHLK"	"[K].lVEEHLk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5XI06"	"Histone acetyltransferase KAT8 OS=Rattus norvegicus OX=10116 GN=Kat8 PE=1 SV=1"	"Q5XI06"	"Histone acetyltransferase KAT8 OS=Rattus norvegicus OX=10116 GN=Kat8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"442.61069"	"1325.81751"	"1325.81931"	"-1.36"	"-0.00060"	"3/50"	"3"	"50"	"1503322.53686523"	"HCD"	"MS2"	"10.01572"	"75.1"	"100.000"	"64.8971"	"21367"	"21367"	"21348"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	""	"80.7"	""	"86.5"	""	"141.2"	"0.4"	"177.6"	"149.7"	""	"327"	"10"	"32.000"	"25.000"	"1.50147379525066"	"13"	"0.007601"	"0.09719"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].VLIVEPEGIk.[K]"	"K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.41602"	"1325.82475"	"1325.82417"	"0.44"	"0.00029"	"4/76"	"4"	"76"	"236305.131774902"	"HCD"	"MS2"	"56.72269"	"14.2"	"100.000"	"84.4959"	"29312"	"29312"	"29291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"22.7"	""	"19.1"	""	"24.6"	""	"27.9"	"26.9"	""	"291"	"20"	"31.000"	"24.000"	"0.161013760568751"	"14"	"0.006267"	"0.07659"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIVEPEGIK"	"[K].VLIVEPEGIk.[K]"	"K10(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"663.41638"	"1325.82549"	"1325.82417"	"0.99"	"0.00066"	"6/76"	"6"	"76"	"264552.523132324"	"HCD"	"MS2"	"51.6865"	"15.9"	"100.000"	"84.4722"	"29331"	"29331"	"29308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.1"	""	"19.2"	""	"21.4"	""	"32.4"	""	"31.6"	"31.6"	""	"289"	"42"	"31.000"	"24.000"	"0.000913835125238637"	"17"	"0.0001991"	"0.005189"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATFAEDSK"	"[K].aTFAEDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"663.86859"	"1326.72991"	"1326.73055"	"-0.49"	"-0.00032"	"7/66"	"7"	"66"	"1289195.95324707"	"HCD"	"MS2"	"100"	"121.9"	"100.000"	"44.5335"	"13137"	"13137"	"13121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.8"	""	"126.9"	""	"122.8"	""	"208.3"	""	"288.1"	"290.0"	""	"575"	"22"	"34.000"	"27.000"	"0.165820358225272"	"17"	"0.0001686"	"0.001601"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATFAEDSK"	"[K].aTFAEDSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"P42893"	"Endothelin-converting enzyme 1 OS=Rattus norvegicus OX=10116 GN=Ece1 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"663.86896"	"1326.73064"	"1326.73055"	"0.06"	"0.00004"	"7/66"	"7"	"66"	"1329829.81726074"	"HCD"	"MS2"	"0"	"131.7"	"100.000"	"44.7188"	"13178"	"13178"	"13156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.8"	""	"135.3"	""	"125.6"	""	"229.3"	"0.5"	"286.2"	"326.7"	""	"552"	"48"	"34.000"	"27.000"	"0.000405423652629707"	"26"	"9.9E-05"	"0.0004984"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYmLTLNR.[V]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.34515"	"1327.68303"	"1327.68775"	"-3.56"	"-0.00236"	"8/76"	"8"	"76"	"2772386.89624023"	"HCD"	"MS2"	"0"	"87.4"	"100.000"	"61.4636"	"20009"	"20009"	"19990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.3"	""	"97.7"	""	"93.0"	""	"206.4"	""	"161.0"	"185.2"	""	"506"	"15"	"34.000"	"27.000"	"0.831994626116237"	"13"	"0.005871"	"0.07242"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGYMLTLNR"	"[K].dGYmLTLNR.[V]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"664.34729"	"1327.68730"	"1327.68775"	"-0.34"	"-0.00022"	"8/76"	"8"	"76"	"1301977.26983643"	"HCD"	"MS2"	"0"	"60.6"	"100.000"	"62.0001"	"20191"	"20191"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.0"	""	"69.5"	""	"60.1"	""	"130.4"	""	"122.7"	"129.0"	""	"546"	"28"	"34.000"	"27.000"	"0.0444797816910644"	"25"	"0.001049"	"0.008839"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"664.35071"	"1327.69414"	"1327.69428"	"-0.10"	"-0.00007"	"8/92"	"8"	"92"	"550123.06463623"	"HCD"	"MS2"	"2.88432"	"13.8"	"100.000"	"79.1907"	"27165"	"27165"	"27144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"18.3"	""	"17.9"	""	"22.8"	""	"27.4"	"22.5"	""	"552"	"63"	"34.000"	"27.000"	"1.4187604783675E-05"	"22"	"0"	"6.064E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESSTASALVA"	"[K].yESSTASALVA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"P62278"	"40S ribosomal protein S13 OS=Rattus norvegicus OX=10116 GN=Rps13 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"664.35071"	"1327.69414"	"1327.69428"	"-0.10"	"-0.00007"	"9/92"	"9"	"92"	"601276.533996582"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"79.2508"	"27216"	"27216"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"21.1"	""	"21.4"	""	"19.1"	""	"33.9"	"34.7"	""	"552"	"66"	"34.000"	"27.000"	"7.19298379799694E-06"	"25"	"0"	"0.0002657"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYMEK"	"[K].lGEYMEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"664.37061"	"1327.73393"	"1327.73319"	"0.56"	"0.00037"	"4/54"	"4"	"54"	"514487.107177734"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"77.5140"	"26483"	"26483"	"26465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.8"	""	"65.5"	""	"69.1"	""	"54.5"	"0.3"	"91.3"	"103.0"	""	"646"	"17"	"35.000"	"28.000"	"0.58237473029764"	"20"	"0.001615"	"0.01485"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYMEK"	"[K].lGEYMEk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"664.37158"	"1327.73589"	"1327.73319"	"2.03"	"0.00135"	"6/54"	"6"	"54"	"474425.729980469"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"77.3861"	"26461"	"26461"	"26447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.5"	""	"56.6"	""	"60.4"	""	"58.2"	""	"86.8"	"87.2"	""	"652"	"14"	"35.000"	"28.000"	"1.23088534241685"	"15"	"0.002166"	"0.01983"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"664.42041"	"1327.83354"	"1327.83496"	"-1.07"	"-0.00071"	"6/66"	"6"	"66"	"781076.220397949"	"HCD"	"MS2"	"12.4544"	"62.2"	"100.000"	"75.5817"	"25734"	"25734"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"81.5"	""	"81.3"	""	"100.6"	""	"120.2"	"135.2"	""	"311"	"32"	"31.000"	"24.000"	"0.00917762679667218"	"19"	"0.0001686"	"0.001579"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"664.42072"	"1327.83415"	"1327.83496"	"-0.61"	"-0.00040"	"5/66"	"5"	"66"	"495822.497802734"	"HCD"	"MS2"	"39.98861"	"36.6"	"100.000"	"74.9638"	"25483"	"25483"	"25459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.7"	""	"47.8"	""	"42.7"	""	"69.9"	""	"75.6"	"66.4"	""	"311"	"21"	"31.000"	"24.000"	"0.12785873206677"	"18"	"0.001488"	"0.012"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"664.42133"	"1327.83537"	"1327.83496"	"0.31"	"0.00021"	"7/66"	"7"	"66"	"2202392.40997314"	"HCD"	"MS2"	"3.19875"	"133.2"	"100.000"	"75.2186"	"25555"	"25555"	"25537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.3"	""	"154.7"	""	"166.5"	""	"236.7"	""	"264.0"	"276.8"	""	"310"	"48"	"31.000"	"24.000"	"0.000227159915348166"	"21"	"9.9E-05"	"0.000477"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"664.42145"	"1327.83562"	"1327.83496"	"0.50"	"0.00033"	"7/66"	"7"	"66"	"2347991.81750488"	"HCD"	"MS2"	"4.246325"	"137.6"	"100.000"	"75.2750"	"25609"	"25609"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.6"	"2.1"	"157.0"	""	"168.9"	""	"231.0"	""	"270.6"	"287.9"	""	"310"	"47"	"31.000"	"24.000"	"0.000340668280281648"	"21"	"9.9E-05"	"0.0004154"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPNIVIAK"	"[K].dPNIVIAk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"664.42151"	"1327.83574"	"1327.83496"	"0.59"	"0.00039"	"7/66"	"7"	"66"	"794190.387207031"	"HCD"	"MS2"	"16.11782"	"53.5"	"100.000"	"74.9051"	"25428"	"25428"	"25403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.0"	""	"62.9"	""	"66.8"	""	"95.5"	""	"95.5"	"112.7"	""	"341"	"48"	"32.000"	"25.000"	"0.000249301208244871"	"21"	"0"	"0.0002249"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"664.83667"	"1328.66606"	"1328.66840"	"-1.76"	"-0.00117"	"6/78"	"6"	"78"	"881779.770385742"	"HCD"	"MS2"	"25.05017"	"61.9"	"100.000"	"48.9060"	"14875"	"14875"	"14851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.3"	""	"79.0"	""	"80.9"	""	"98.4"	""	"122.4"	"129.6"	""	"464"	"25"	"33.000"	"26.000"	"0.081000553191032"	"19"	"0.001049"	"0.008679"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.83673"	"1328.66619"	"1328.66840"	"-1.66"	"-0.00111"	"6/78"	"6"	"78"	"1143965.4319458"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"48.6264"	"14797"	"14797"	"14776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.4"	""	"97.6"	""	"114.4"	""	"122.3"	""	"138.9"	"143.6"	""	"457"	"26"	"33.000"	"26.000"	"0.0571328915147635"	"14"	"0.001615"	"0.0137"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"664.83698"	"1328.66667"	"1328.66840"	"-1.30"	"-0.00086"	"6/78"	"6"	"78"	"5219603.64959717"	"HCD"	"MS2"	"5.993433"	"244.9"	"100.000"	"49.2157"	"15000"	"15000"	"14982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.4"	""	"307.5"	""	"330.7"	""	"401.2"	""	"484.3"	"468.6"	""	"461"	"30"	"33.000"	"26.000"	"0.0209735009341734"	"17"	"0.001348"	"0.01119"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"664.83734"	"1328.66741"	"1328.66840"	"-0.75"	"-0.00050"	"6/78"	"6"	"78"	"5231548.34643555"	"HCD"	"MS2"	"12.47434"	"247.4"	"100.000"	"48.9224"	"14916"	"14916"	"14900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"342.3"	""	"305.3"	""	"343.3"	""	"432.8"	"0.6"	"448.4"	"471.4"	""	"466"	"31"	"33.000"	"26.000"	"0.0206231937090585"	"22"	"0.0001686"	"0.001814"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"664.83752"	"1328.66777"	"1328.66840"	"-0.47"	"-0.00031"	"12/78"	"12"	"78"	"1986729.63067627"	"HCD"	"MS2"	"2.747684"	"105.9"	"100.000"	"49.2282"	"15039"	"15039"	"15022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.7"	""	"131.9"	""	"147.2"	""	"169.5"	""	"194.6"	"211.8"	""	"473"	"31"	"33.000"	"26.000"	"0.0172516701175205"	"21"	"0.0001991"	"0.005383"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPEYFAER"	"[R].sTPEYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"664.83771"	"1328.66814"	"1328.66840"	"-0.19"	"-0.00013"	"12/78"	"12"	"78"	"2566466.59222412"	"HCD"	"MS2"	"6.324725"	"137.3"	"100.000"	"49.5121"	"15120"	"15120"	"15103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.5"	""	"180.4"	""	"189.7"	""	"206.7"	""	"252.7"	"272.4"	""	"470"	"31"	"33.000"	"26.000"	"0.0175415458226366"	"17"	"0.0009352"	"0.008097"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"664.85730"	"1328.70732"	"1328.70982"	"-1.88"	"-0.00125"	"7/66"	"7"	"66"	"3708497.78375244"	"HCD"	"MS2"	"0"	"301.0"	"100.000"	"42.4285"	"12244"	"12244"	"12227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"490.4"	""	"364.4"	""	"388.6"	""	"501.8"	"0.4"	"537.8"	"567.2"	""	"552"	"36"	"34.000"	"27.000"	"0.00663604132801914"	"20"	"0.0001991"	"0.00303"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"664.85785"	"1328.70842"	"1328.70982"	"-1.05"	"-0.00070"	"7/66"	"7"	"66"	"3882525.42199707"	"HCD"	"MS2"	"0"	"315.4"	"100.000"	"42.7181"	"12363"	"12363"	"12346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"489.0"	""	"344.2"	""	"416.2"	""	"507.4"	""	"595.5"	"641.5"	""	"554"	"36"	"34.000"	"27.000"	"0.00644881278373208"	"20"	"0.0001991"	"0.002489"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"664.85791"	"1328.70854"	"1328.70982"	"-0.96"	"-0.00064"	"7/66"	"7"	"66"	"5302047.00164795"	"HCD"	"MS2"	"0"	"416.6"	"100.000"	"42.3061"	"12228"	"12228"	"12215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"688.2"	""	"493.8"	""	"537.5"	""	"706.8"	""	"738.2"	"781.5"	""	"554"	"35"	"34.000"	"27.000"	"0.00906733724814382"	"20"	"0.0001686"	"0.001829"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSDYDGK"	"[K].sVSDYDGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"664.85852"	"1328.70976"	"1328.70982"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"2061723.85302734"	"HCD"	"MS2"	"0"	"172.5"	"100.000"	"42.6170"	"12355"	"12355"	"12335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.7"	""	"196.4"	""	"235.7"	""	"281.8"	""	"333.2"	"344.0"	""	"559"	"37"	"34.000"	"27.000"	"0.00521653123588291"	"21"	"0.0001686"	"0.001531"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPIDAITGEAR"	"[K].gPIDAITGEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZPX4"	"Plexin-A3 OS=Rattus norvegicus OX=10116 GN=Plxna3 PE=3 SV=1"	"D3ZPX4"	"Plexin-A3 OS=Rattus norvegicus OX=10116 GN=Plxna3 PE=3 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"664.87177"	"1328.73625"	"1328.73715"	"-0.67"	"-0.00045"	"7/90"	"7"	"90"	"435311.62512207"	"HCD"	"MS2"	"25.98776"	"33.2"	"100.000"	"68.5543"	"22884"	"22884"	"22858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.2"	""	"46.6"	""	"46.1"	""	"50.5"	"1.5"	"64.8"	"64.1"	""	"628"	"31"	"34.000"	"27.000"	"0.0255817145182544"	"20"	"0.0001991"	"0.002801"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVLIGEQAR"	"[R].dVVLIGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"664.88953"	"1328.77178"	"1328.77353"	"-1.32"	"-0.00088"	"7/88"	"7"	"88"	"632481.58770752"	"HCD"	"MS2"	"50.30902"	"35.5"	"100.000"	"69.5179"	"23242"	"23242"	"23225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"49.7"	""	"53.9"	""	"50.6"	"0.5"	"63.5"	"66.9"	""	"590"	"42"	"34.000"	"27.000"	"0.00180643365558808"	"26"	"0"	"3.273E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVDEGALLR"	"[R].gGIVDEGALLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"664.88971"	"1328.77214"	"1328.77353"	"-1.04"	"-0.00069"	"9/82"	"9"	"82"	"348545.97845459"	"HCD"	"MS2"	"17.22341"	"24.2"	"100.000"	"85.4962"	"29745"	"29745"	"29724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.2"	""	"30.0"	""	"26.7"	""	"33.8"	""	"62.9"	"39.7"	""	"615"	"56"	"34.000"	"27.000"	"7.35944595094657E-05"	""	"0"	"7.127E-06"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVDEGALLR"	"[R].gGIVDEGALLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"664.88983"	"1328.77239"	"1328.77353"	"-0.86"	"-0.00057"	"6/82"	"6"	"82"	"135579.578796387"	"HCD"	"MS2"	"29.31896"	"11.6"	"100.000"	"85.7114"	"29802"	"29802"	"29786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"18.9"	""	"13.6"	""	"11.7"	""	"27.6"	"23.1"	""	"615"	"27"	"34.000"	"27.000"	"0.0639506731284387"	"15"	"0.0001686"	"0.001545"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVLIGEQAR"	"[R].dVVLIGEQAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"664.88983"	"1328.77239"	"1328.77353"	"-0.86"	"-0.00057"	"7/88"	"7"	"88"	"637779.418762207"	"HCD"	"MS2"	"30.30022"	"31.5"	"100.000"	"69.5518"	"23290"	"23290"	"23271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.9"	""	"50.8"	""	"38.0"	""	"52.6"	""	"50.9"	"52.2"	""	"615"	"44"	"34.000"	"27.000"	"0.00110368494903339"	""	"0"	"5.254E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGIVDEGALLR"	"[R].gGIVDEGALLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"O08651"	"D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Phgdh PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"664.89026"	"1328.77324"	"1328.77353"	"-0.22"	"-0.00014"	"9/82"	"9"	"82"	"399261.119689941"	"HCD"	"MS2"	"12.69983"	"24.7"	"100.000"	"85.3818"	"29669"	"29669"	"29652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.8"	""	"29.0"	""	"27.5"	""	"34.4"	""	"63.0"	"43.5"	""	"603"	"43"	"34.000"	"27.000"	"0.0014102214509809"	"25"	"0"	"1.12E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLVGELGAAVR"	"[R].dLVGELGAAVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P17164"	"Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1"	"P17164"	"Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"664.89044"	"1328.77361"	"1328.77353"	"0.06"	"0.00004"	"9/88"	"9"	"88"	"515964.720214844"	"HCD"	"MS2"	"52.58241"	"25.7"	"100.000"	"100.5293"	"35780"	"35780"	"35755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"29.6"	""	"31.3"	""	"44.0"	"0.8"	"53.6"	"51.7"	""	"621"	"54"	"34.000"	"27.000"	"0.00013774048394071"	""	"0"	"1.302E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"664.91241"	"1328.81755"	"1328.81897"	"-1.07"	"-0.00071"	"9/60"	"9"	"60"	"292320.107727051"	"HCD"	"MS2"	"19.76093"	"21.5"	"100.000"	"93.1850"	"32840"	"32840"	"32816"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"22.6"	""	"23.6"	""	"35.6"	""	"48.0"	"52.8"	""	"486"	"25"	"33.000"	"26.000"	"0.0789962132646606"	"22"	"0.004392"	"0.0523"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"664.91254"	"1328.81780"	"1328.81897"	"-0.89"	"-0.00059"	"6/60"	"6"	"60"	"3733077.89019775"	"HCD"	"MS2"	"0"	"179.5"	"100.000"	"92.9197"	"32697"	"32697"	"32683"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.6"	""	"174.3"	""	"216.3"	""	"280.7"	""	"342.8"	"403.4"	""	"486"	"46"	"33.000"	"26.000"	"0.000559250361630267"	""	"0"	"0.0003879"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"664.91266"	"1328.81804"	"1328.81897"	"-0.70"	"-0.00047"	"6/60"	"6"	"60"	"3569953.71954346"	"HCD"	"MS2"	"0"	"170.5"	"100.000"	"92.8577"	"32708"	"32708"	"32691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.6"	"2.9"	"166.9"	""	"198.4"	""	"260.4"	"1.0"	"314.9"	"384.4"	""	"485"	"44"	"33.000"	"26.000"	"0.00108071640236395"	"26"	"9.9E-05"	"0.0004082"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"664.91266"	"1328.81804"	"1328.81897"	"-0.70"	"-0.00047"	"7/60"	"7"	"60"	"1903751.77600098"	"HCD"	"MS2"	"7.707022"	"106.4"	"100.000"	"94.0917"	"33206"	"33206"	"33188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.5"	""	"123.9"	""	"137.2"	""	"161.4"	""	"202.5"	"218.9"	""	"485"	"47"	"33.000"	"26.000"	"0.000525668245418776"	""	"0.002189"	"0.02097"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"664.91278"	"1328.81828"	"1328.81897"	"-0.52"	"-0.00034"	"5/60"	"5"	"60"	"570409.907226563"	"HCD"	"MS2"	"3.257078"	"37.9"	"100.000"	"94.3986"	"33331"	"33331"	"33310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.5"	""	"39.2"	""	"50.8"	""	"63.7"	""	"64.2"	"89.5"	""	"485"	"29"	"33.000"	"26.000"	"0.0284912657072836"	"24"	"0.002508"	"0.02347"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEEGVPK"	"[K].lVEEGVPk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYY8"	"Acetyl-coenzyme A transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc33a1 PE=2 SV=1"	"Q6AYY8"	"Acetyl-coenzyme A transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc33a1 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"664.91284"	"1328.81841"	"1328.81897"	"-0.43"	"-0.00028"	"5/58"	"5"	"58"	"301924.351135254"	"HCD"	"MS2"	"45.14339"	"25.3"	"100.000"	"65.3701"	"21594"	"21594"	"21568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"32.1"	""	"31.3"	""	"41.5"	"1.3"	"54.8"	"48.0"	""	"485"	"9"	"33.000"	"26.000"	"2.84257376145422"	"19"	"0.009275"	"0.1196"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"664.91296"	"1328.81865"	"1328.81897"	"-0.24"	"-0.00016"	"7/60"	"7"	"60"	"1913418.72619629"	"HCD"	"MS2"	"6.677391"	"102.6"	"100.000"	"94.1568"	"33197"	"33197"	"33179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.2"	""	"124.8"	""	"129.6"	""	"150.1"	""	"185.5"	"224.3"	""	"485"	"46"	"33.000"	"26.000"	"0.000596639144005799"	""	"0.0001686"	"0.001135"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"664.91302"	"1328.81877"	"1328.81897"	"-0.15"	"-0.00010"	"6/60"	"6"	"60"	"352816.502319336"	"HCD"	"MS2"	"15.68476"	"22.7"	"100.000"	"93.2196"	"32817"	"32817"	"32799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.2"	""	"18.0"	""	"29.3"	""	"34.9"	""	"48.8"	"52.0"	""	"481"	"36"	"33.000"	"26.000"	"0.00609698435634747"	""	"0.001951"	"0.01735"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"664.91302"	"1328.81877"	"1328.81897"	"-0.15"	"-0.00010"	"6/60"	"6"	"60"	"5163495.89599609"	"HCD"	"MS2"	"5.682978"	"270.5"	"100.000"	"93.8384"	"33068"	"33068"	"33051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"434.7"	""	"338.6"	""	"352.0"	""	"417.7"	""	"461.7"	"559.5"	""	"481"	"43"	"33.000"	"26.000"	"0.00119981719234133"	"26"	"0.0001686"	"0.001135"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"664.91315"	"1328.81902"	"1328.81897"	"0.03"	"0.00002"	"5/60"	"5"	"60"	"422230.361450195"	"HCD"	"MS2"	"25.42031"	"28.3"	"100.000"	"94.5006"	"33337"	"33337"	"33319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.8"	""	"34.2"	""	"37.3"	""	"45.9"	""	"50.4"	"56.2"	""	"485"	"27"	"33.000"	"26.000"	"0.0432226851106162"	"22"	"0.002084"	"0.01861"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"664.91315"	"1328.81902"	"1328.81897"	"0.03"	"0.00002"	"7/60"	"7"	"60"	"414603.348571777"	"HCD"	"MS2"	"23.83429"	"26.6"	"100.000"	"90.9742"	"31950"	"31950"	"31928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.4"	""	"30.9"	""	"31.6"	""	"42.1"	"1.1"	"46.9"	"54.2"	""	"485"	"32"	"33.000"	"26.000"	"0.0139544184804261"	"26"	"0.001596"	"0.01288"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"664.91315"	"1328.81902"	"1328.81897"	"0.03"	"0.00002"	"7/60"	"7"	"60"	"1556357.52069092"	"HCD"	"MS2"	"31.89105"	"86.8"	"100.000"	"92.3225"	"32459"	"32459"	"32449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.3"	""	"108.3"	""	"98.9"	""	"144.7"	""	"148.4"	"170.7"	""	"485"	"43"	"33.000"	"26.000"	"0.0011606779738824"	""	"0.001261"	"0.009879"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"664.91315"	"1328.81902"	"1328.81897"	"0.03"	"0.00002"	"6/60"	"6"	"60"	"5289109.40460205"	"HCD"	"MS2"	"5.860408"	"281.7"	"100.000"	"93.7780"	"33079"	"33079"	"33062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"431.5"	""	"352.2"	""	"376.3"	""	"416.9"	""	"477.3"	"621.5"	""	"485"	"46"	"33.000"	"26.000"	"0.000614768692895743"	"26"	"0.0001686"	"0.001033"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"664.91321"	"1328.81914"	"1328.81897"	"0.12"	"0.00008"	"6/60"	"6"	"60"	"1069347.52734375"	"HCD"	"MS2"	"3.785986"	"62.7"	"100.000"	"93.4777"	"32957"	"32957"	"32940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.0"	""	"82.8"	""	"80.0"	""	"106.0"	""	"101.6"	"117.9"	""	"485"	"43"	"33.000"	"26.000"	"0.00122662480535755"	"24"	"0.001596"	"0.01295"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"664.91327"	"1328.81926"	"1328.81897"	"0.22"	"0.00014"	"6/60"	"6"	"60"	"9286392.36877441"	"HCD"	"MS2"	"0"	"440.6"	"100.000"	"92.5565"	"32590"	"32590"	"32575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"769.3"	""	"439.1"	""	"489.2"	""	"730.4"	""	"785.2"	"963.6"	""	"485"	"44"	"33.000"	"26.000"	"0.00107327680297937"	"26"	"0.0001686"	"0.001284"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"664.91333"	"1328.81938"	"1328.81897"	"0.31"	"0.00020"	"7/60"	"7"	"60"	"586243.171203613"	"HCD"	"MS2"	"15.65974"	"36.7"	"100.000"	"91.2684"	"32031"	"32031"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"46.2"	""	"49.1"	""	"60.6"	""	"59.5"	"76.9"	""	"483"	"47"	"33.000"	"26.000"	"0.000478538776731931"	""	"0.0009352"	"0.008325"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"664.91333"	"1328.81938"	"1328.81897"	"0.31"	"0.00020"	"7/60"	"7"	"60"	"736298.693359375"	"HCD"	"MS2"	"7.296295"	"46.1"	"100.000"	"93.5289"	"32942"	"32942"	"32923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.4"	""	"60.4"	""	"59.0"	""	"82.9"	""	"76.5"	"83.9"	""	"483"	"46"	"33.000"	"26.000"	"0.000639612783473517"	""	"0.001348"	"0.0107"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"664.91345"	"1328.81963"	"1328.81897"	"0.49"	"0.00033"	"7/60"	"7"	"60"	"1724242.47021484"	"HCD"	"MS2"	"33.00539"	"95.2"	"100.000"	"92.2618"	"32470"	"32470"	"32453"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.9"	""	"114.0"	""	"99.3"	""	"170.6"	"0.2"	"152.6"	"189.4"	""	"483"	"47"	"33.000"	"26.000"	"0.000532006740827409"	""	"0.001596"	"0.01287"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"664.91351"	"1328.81975"	"1328.81897"	"0.58"	"0.00039"	"6/60"	"6"	"60"	"9186930.03674316"	"HCD"	"MS2"	"0.2996255"	"413.8"	"100.000"	"92.6270"	"32584"	"32584"	"32568"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"708.1"	""	"422.8"	""	"472.8"	""	"659.2"	""	"738.1"	"926.6"	""	"522"	"46"	"34.000"	"27.000"	"0.000587003252123139"	"27"	"0.0001686"	"0.001253"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIPELNGK"	"[K].vIPELnGk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"2"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797; Q9ESV6"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3; Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Rattus norvegicus OX=10116 GN=Gapdhs PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"664.91370"	"1328.82012"	"1328.81897"	"0.86"	"0.00057"	"7/60"	"7"	"60"	"339481.777954102"	"HCD"	"MS2"	"63.78821"	"22.4"	"100.000"	"90.9613"	"31907"	"31907"	"31883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.4"	""	"24.8"	""	"32.1"	""	"33.9"	""	"38.8"	"50.1"	""	"522"	"23"	"34.000"	"27.000"	"0.128718362832238"	"25"	"0.00212"	"0.01914"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"665.34802"	"1329.68877"	"1329.68880"	"-0.02"	"-0.00001"	"8/84"	"8"	"84"	"1079113.35906982"	"HCD"	"MS2"	"26.73949"	"21.8"	"100.000"	"99.2088"	"35272"	"35272"	"35255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.6"	""	"28.8"	""	"30.8"	""	"33.6"	"0.2"	"44.4"	"49.6"	""	"596"	"57"	"34.000"	"27.000"	"5.75726558471043E-05"	"22"	"0"	"4.399E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"665.34802"	"1329.68877"	"1329.68880"	"-0.02"	"-0.00001"	"8/84"	"8"	"84"	"1822217.94921875"	"HCD"	"MS2"	"18.39976"	"29.3"	"100.000"	"99.2123"	"35244"	"35244"	"35226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	""	"32.5"	""	"44.2"	""	"46.5"	""	"59.3"	"62.4"	""	"596"	"58"	"34.000"	"27.000"	"4.53123163860284E-05"	"23"	"0"	"0.0003239"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"665.34808"	"1329.68889"	"1329.68880"	"0.07"	"0.00005"	"8/84"	"8"	"84"	"2431140.20361328"	"HCD"	"MS2"	"2.421579"	"30.3"	"100.000"	"99.5170"	"35368"	"35368"	"35351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"46.1"	""	"38.4"	""	"51.9"	""	"55.4"	"66.9"	""	"596"	"60"	"34.000"	"27.000"	"2.93235309516818E-05"	"22"	"9.9E-05"	"0.0004315"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYNEAGVTFT"	"[K].vYNEAGVTFT.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"665.34833"	"1329.68938"	"1329.68880"	"0.44"	"0.00029"	"8/84"	"8"	"84"	"3525280.30987549"	"HCD"	"MS2"	"1.942997"	"43.4"	"100.000"	"99.4905"	"35386"	"35386"	"35369"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.6"	""	"62.1"	""	"58.9"	""	"70.0"	""	"86.6"	"92.8"	""	"595"	"60"	"34.000"	"27.000"	"2.83456858797037E-05"	"23"	"0"	"0.0001272"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSDYEMK"	"[K].vSDYEMk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"P04961"	"Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"665.35858"	"1329.70989"	"1329.71246"	"-1.94"	"-0.00129"	"6/54"	"6"	"54"	"595251.000610352"	"HCD"	"MS2"	"32.84191"	"59.1"	"100.000"	"56.1272"	"17842"	"17842"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.3"	""	"83.7"	""	"87.3"	""	"74.9"	"2.1"	"99.8"	"108.7"	""	"703"	"9"	"35.000"	"28.000"	"4.21624005057006"	"17"	"0.002559"	"0.02539"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPLAEWESR"	"[R].iPLAEWESR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"Q68FY0"	"Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Uqcrc1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"665.37201"	"1329.73674"	"1329.73642"	"0.24"	"0.00016"	"6/70"	"6"	"70"	"706650.695007324"	"HCD"	"MS2"	"36.61002"	"28.3"	"100.000"	"100.6783"	"35868"	"35868"	"35848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.7"	""	"35.6"	""	"40.9"	""	"43.3"	""	"62.1"	"58.3"	""	"726"	"16"	"35.000"	"28.000"	"0.924499381688371"	"17"	"0.0001991"	"0.002042"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYVDEFK"	"[K].aYVDEFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"665.37610"	"1329.74492"	"1329.74547"	"-0.42"	"-0.00028"	"12/50"	"12"	"50"	"1833463.68676758"	"HCD"	"MS2"	"0"	"168.2"	"100.000"	"76.8120"	"26235"	"26235"	"26218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.0"	""	"228.7"	""	"243.3"	""	"269.3"	"0.5"	"267.9"	"302.2"	""	"725"	"35"	"35.000"	"28.000"	"0.0109725611768672"	"25"	"0.001488"	"0.01257"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYVDEFK"	"[K].aYVDEFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"665.37683"	"1329.74639"	"1329.74547"	"0.69"	"0.00046"	"12/50"	"12"	"50"	"2287108.54705811"	"HCD"	"MS2"	"0"	"200.8"	"100.000"	"76.6961"	"26156"	"26156"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.5"	""	"282.6"	""	"292.7"	""	"289.1"	""	"350.8"	"356.3"	""	"731"	"37"	"35.000"	"28.000"	"0.00714311071085906"	"26"	"0.001615"	"0.0143"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYVDEFK"	"[K].aYVDEFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"665.37701"	"1329.74675"	"1329.74547"	"0.96"	"0.00064"	"12/50"	"12"	"50"	"3046498.26379395"	"HCD"	"MS2"	"2.571119"	"264.3"	"100.000"	"76.5334"	"26122"	"26122"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"500.9"	""	"393.7"	""	"380.2"	""	"390.6"	"1.5"	"406.5"	"422.9"	""	"729"	"36"	"35.000"	"28.000"	"0.00844690349913511"	"26"	"0.002166"	"0.01974"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYVDEFK"	"[K].aYVDEFk.[F]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"665.37726"	"1329.74724"	"1329.74547"	"1.33"	"0.00088"	"12/50"	"12"	"50"	"2695884.76080322"	"HCD"	"MS2"	"2.858947"	"223.2"	"100.000"	"76.3963"	"26034"	"26034"	"26016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"454.6"	""	"352.7"	""	"346.1"	""	"291.5"	""	"321.7"	"339.9"	""	"749"	"21"	"35.000"	"28.000"	"0.3180180879011"	"18"	"0.004672"	"0.05472"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQELR"	"[R].aLELEQELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.3939"	"0.0000"	"1"	"1"	"1"	"665.38135"	"1329.75542"	"1329.75755"	"-1.60"	"-0.00106"	"6/78"	"6"	"78"	"557188.880737305"	"HCD"	"MS2"	"15.54821"	"42.5"	"100.000"	"87.8301"	"30684"	"30684"	"30665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"59.6"	""	"53.4"	""	"74.2"	"0.4"	"74.4"	"80.4"	""	"730"	"33"	"35.000"	"28.000"	"0.0166070641954768"	""	"9.9E-05"	"0.0004671"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELEQELR"	"[R].aLELEQELR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"665.38147"	"1329.75566"	"1329.75755"	"-1.42"	"-0.00094"	"7/78"	"7"	"78"	"440556.475097656"	"HCD"	"MS2"	"20.56334"	"34.0"	"100.000"	"87.8495"	"30656"	"30656"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.1"	""	"40.4"	""	"48.1"	""	"66.6"	"1.1"	"63.1"	"61.1"	""	"730"	"29"	"35.000"	"28.000"	"0.0421010439104699"	""	"0.0001686"	"0.001179"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEELAR"	"[R].qLLEEELAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"665.38190"	"1329.75652"	"1329.75755"	"-0.77"	"-0.00051"	"7/84"	"7"	"84"	"709171.034545898"	"HCD"	"MS2"	"0"	"40.7"	"100.000"	"82.7837"	"28619"	"28619"	"28602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.9"	""	"63.4"	""	"51.9"	""	"58.4"	""	"66.9"	"89.3"	""	"744"	"49"	"35.000"	"28.000"	"0.000481440853019394"	""	"0"	"0.0001668"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLLEEELAR"	"[R].qLLEEELAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5918"	"0.0000"	"1"	"1"	"1"	"665.38220"	"1329.75713"	"1329.75755"	"-0.31"	"-0.00021"	"8/84"	"8"	"84"	"592064.557189941"	"HCD"	"MS2"	"0"	"36.0"	"100.000"	"82.8949"	"28692"	"28692"	"28675"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"47.6"	""	"50.7"	""	"49.2"	"0.6"	"68.6"	"70.3"	""	"743"	"49"	"35.000"	"28.000"	"0.000449737206614004"	""	"0"	"3.648E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADLQVQVTR"	"[K].aADLQVQVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"665.38794"	"1329.76860"	"1329.76878"	"-0.13"	"-0.00009"	"7/94"	"7"	"94"	"1311000.14727783"	"HCD"	"MS2"	"52.46576"	"83.1"	"100.000"	"52.6434"	"16426"	"16426"	"16404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.1"	""	"108.0"	""	"115.6"	""	"133.2"	""	"140.9"	"174.2"	""	"778"	"42"	"35.000"	"28.000"	"0.00226438151712869"	""	"0"	"2.55E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADLQVQVTR"	"[K].aADLQVQVTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"O35854"	"Branched-chain-amino-acid aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bcat2 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"665.38824"	"1329.76921"	"1329.76878"	"0.33"	"0.00022"	"7/94"	"7"	"94"	"1345819.02178955"	"HCD"	"MS2"	"44.44894"	"86.7"	"100.000"	"52.9839"	"16531"	"16531"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.3"	""	"119.4"	""	"123.5"	""	"136.9"	""	"153.2"	"166.9"	""	"789"	"43"	"35.000"	"28.000"	"0.00217293636231931"	""	"0"	"2.956E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGPSPEVVR"	"[R].fIGPSPEVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"665.39056"	"1329.77385"	"1329.77280"	"0.79"	"0.00052"	"6/76"	"6"	"76"	"440366.582275391"	"HCD"	"MS2"	"7.313102"	"26.2"	"100.000"	"81.0067"	"27903"	"27903"	"27886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"27.7"	""	"37.7"	""	"40.6"	""	"52.2"	"53.1"	""	"756"	"30"	"35.000"	"28.000"	"0.0394904242865462"	"26"	"0.003904"	"0.04228"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGPSPEVVR"	"[R].fIGPSPEVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"665.39056"	"1329.77385"	"1329.77280"	"0.79"	"0.00052"	"6/76"	"6"	"76"	"580734.468139648"	"HCD"	"MS2"	"9.117442"	"32.0"	"100.000"	"81.0137"	"27933"	"27933"	"27916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.1"	""	"41.4"	""	"43.7"	""	"42.6"	""	"55.5"	"67.2"	""	"756"	"32"	"35.000"	"28.000"	"0.0228292581904272"	"24"	"0.001261"	"0.009792"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GQISEPLK"	"[R].gQISEPLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"665.41040"	"1329.81352"	"1329.81422"	"-0.53"	"-0.00035"	"7/70"	"7"	"70"	"1274026.70092773"	"HCD"	"MS2"	"43.02306"	"91.9"	"100.000"	"52.9379"	"16512"	"16512"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.4"	""	"117.3"	""	"119.3"	""	"136.1"	""	"166.0"	"192.4"	""	"571"	"14"	"34.000"	"27.000"	"1.16039570476668"	"25"	"0.001049"	"0.008649"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQISEPLK"	"[R].gQISEPLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"665.41052"	"1329.81377"	"1329.81422"	"-0.34"	"-0.00023"	"7/70"	"7"	"70"	"1663147.62670898"	"HCD"	"MS2"	"32.93552"	"127.9"	"100.000"	"52.6388"	"16390"	"16390"	"16371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.1"	""	"167.9"	""	"189.5"	""	"194.0"	""	"232.7"	"247.2"	""	"571"	"45"	"34.000"	"27.000"	"0.000989933708041978"	"24"	"9.9E-05"	"0.0008044"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQISEPLK"	"[R].gQISEPLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"665.41052"	"1329.81377"	"1329.81422"	"-0.34"	"-0.00023"	"7/70"	"7"	"70"	"1808696.75567627"	"HCD"	"MS2"	"26.18387"	"131.8"	"100.000"	"52.3281"	"16297"	"16297"	"16278"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.9"	""	"170.6"	""	"187.6"	""	"197.4"	""	"242.1"	"250.7"	""	"571"	"45"	"34.000"	"27.000"	"0.000852326737701078"	"23"	"0"	"0.0002693"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAFEFLSSA"	"[K].eTAFEFLSSA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"665.83990"	"1330.67253"	"1330.67281"	"-0.21"	"-0.00014"	"7/90"	"7"	"90"	"2258713.19287109"	"HCD"	"MS2"	"5.409914"	"26.3"	"100.000"	"114.2346"	"41221"	"41221"	"41204"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"27.2"	""	"29.5"	""	"42.3"	"0.3"	"58.8"	"64.4"	""	"526"	"56"	"34.000"	"27.000"	"6.5456947470827E-05"	"22"	"9.9E-05"	"0.0008161"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAFEFLSSA"	"[K].eTAFEFLSSA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"665.84003"	"1330.67278"	"1330.67281"	"-0.03"	"-0.00002"	"7/90"	"7"	"90"	"1831569.35174561"	"HCD"	"MS2"	"2.473372"	"20.8"	"100.000"	"114.3066"	"41263"	"41263"	"41247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.7"	""	"22.7"	""	"25.2"	""	"37.9"	"1.7"	"48.1"	"41.0"	""	"525"	"56"	"34.000"	"27.000"	"6.50323290128737E-05"	"22"	"9.9E-05"	"0.0006617"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KQASGPER"	"[R].kQASGPER.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"1"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"444.26599"	"1330.78342"	"1330.78432"	"-0.68"	"-0.00030"	"6/76"	"6"	"76"	"1148990.20013428"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"19.4695"	"3080"	"3080"	"3071"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.1"	""	"162.8"	""	"177.8"	""	"145.1"	""	"145.7"	"201.0"	""	"855"	"10"	"36.000"	"29.000"	"4.33447117402431"	"16"	"0.002711"	"0.02861"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"665.90143"	"1330.79558"	"1330.79824"	"-2.00"	"-0.00133"	"7/62"	"7"	"62"	"1011783.04840088"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"56.5102"	"17996"	"17996"	"17978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.7"	""	"107.9"	""	"110.7"	""	"120.2"	""	"150.8"	"145.6"	""	"742"	"34"	"35.000"	"28.000"	"0.0137522547781336"	"25"	"0.002755"	"0.02908"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"665.90155"	"1330.79582"	"1330.79824"	"-1.81"	"-0.00121"	"7/62"	"7"	"62"	"986351.940917969"	"HCD"	"MS2"	"0"	"83.3"	"100.000"	"56.5480"	"17977"	"17977"	"17963"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.7"	""	"121.9"	""	"110.4"	""	"114.5"	""	"154.3"	"156.2"	""	"742"	"29"	"35.000"	"28.000"	"0.0428917641853269"	"21"	"0.00455"	"0.05302"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"665.90204"	"1330.79680"	"1330.79824"	"-1.08"	"-0.00072"	"7/62"	"7"	"62"	"930975.343383789"	"HCD"	"MS2"	"0"	"70.5"	"100.000"	"56.8102"	"18117"	"18117"	"18101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.6"	""	"87.2"	""	"90.0"	""	"114.2"	"0.5"	"138.0"	"137.8"	""	"739"	"45"	"35.000"	"28.000"	"0.00128414611653264"	"24"	"0.001615"	"0.01378"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"665.90234"	"1330.79741"	"1330.79824"	"-0.62"	"-0.00041"	"10/62"	"10"	"62"	"450988.751586914"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"57.1203"	"18243"	"18243"	"18216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"43.9"	""	"41.7"	""	"55.4"	"1.4"	"60.8"	"70.2"	""	"737"	"27"	"35.000"	"28.000"	"0.0752380432610722"	"19"	"0.004234"	"0.04809"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGLSPEK"	"[K].eLGLSPEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"665.90234"	"1330.79741"	"1330.79824"	"-0.62"	"-0.00041"	"10/68"	"10"	"68"	"331188.406738281"	"HCD"	"MS2"	"33.88715"	"29.3"	"100.000"	"65.2953"	"21530"	"21530"	"21503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"33.8"	""	"38.4"	""	"51.1"	"0.3"	"50.9"	"64.5"	""	"737"	"8"	"35.000"	"28.000"	"6.03166888146148"	"16"	"0.003568"	"0.03987"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"665.90247"	"1330.79766"	"1330.79824"	"-0.44"	"-0.00029"	"7/62"	"7"	"62"	"1006247.03613281"	"HCD"	"MS2"	"11.52843"	"69.0"	"100.000"	"56.8505"	"18098"	"18098"	"18081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.2"	""	"99.6"	""	"91.5"	""	"106.8"	""	"130.7"	"131.7"	""	"737"	"43"	"35.000"	"28.000"	"0.0018596768815216"	"23"	"0.001348"	"0.01089"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGLSPEK"	"[K].eLGLSPEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"3"	"665.90247"	"1330.79766"	"1330.79824"	"-0.44"	"-0.00029"	"10/68"	"10"	"68"	"1628523.70379639"	"HCD"	"MS2"	"8.068144"	"110.0"	"100.000"	"64.9800"	"21401"	"21401"	"21379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.4"	""	"118.6"	""	"135.1"	""	"197.7"	""	"234.2"	"235.7"	""	"737"	"12"	"35.000"	"28.000"	"2.12538441760044"	"18"	"0.002875"	"0.03091"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"665.90253"	"1330.79778"	"1330.79824"	"-0.35"	"-0.00023"	"11/66"	"11"	"66"	"1493680.81115723"	"HCD"	"MS2"	"0"	"118.0"	"100.000"	"51.7885"	"16077"	"16077"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.6"	""	"146.1"	""	"144.0"	""	"194.8"	""	"228.9"	"253.1"	""	"737"	"34"	"35.000"	"28.000"	"0.0159381346736401"	"20"	"0.0001686"	"0.001686"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"665.90253"	"1330.79778"	"1330.79824"	"-0.35"	"-0.00023"	"7/66"	"7"	"66"	"7278721.84765625"	"HCD"	"MS2"	"0"	"478.7"	"100.000"	"51.7630"	"16034"	"16034"	"16022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"690.4"	""	"663.6"	""	"678.1"	""	"751.5"	""	"856.9"	"898.2"	""	"737"	"48"	"35.000"	"28.000"	"0.000652285151139969"	"22"	"0.0001991"	"0.002035"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"665.90259"	"1330.79790"	"1330.79824"	"-0.25"	"-0.00017"	"6/62"	"6"	"62"	"356202.988769531"	"HCD"	"MS2"	"10.53617"	"28.1"	"100.000"	"57.4427"	"18339"	"18339"	"18314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.9"	""	"35.9"	""	"35.4"	""	"43.3"	"0.4"	"54.7"	"61.0"	""	"737"	"32"	"35.000"	"28.000"	"0.0216988886998535"	"21"	"0.004852"	"0.06011"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"665.90271"	"1330.79814"	"1330.79824"	"-0.07"	"-0.00005"	"7/62"	"7"	"62"	"890010.170654297"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"57.1395"	"18216"	"18216"	"18196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"74.9"	""	"96.5"	""	"96.6"	"0.2"	"129.7"	"132.6"	""	"734"	"45"	"35.000"	"28.000"	"0.00125217798565248"	"25"	"0.001488"	"0.01236"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"665.90271"	"1330.79814"	"1330.79824"	"-0.07"	"-0.00005"	"7/66"	"7"	"66"	"6953263.4541626"	"HCD"	"MS2"	"0"	"460.1"	"100.000"	"51.4818"	"15953"	"15953"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"646.3"	""	"639.3"	""	"650.0"	""	"704.5"	""	"853.4"	"875.4"	""	"734"	"48"	"35.000"	"28.000"	"0.000642193734725249"	"22"	"9.9E-05"	"0.0008224"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPEEAIK"	"[R].vSPEEAIk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"P68101"	"Eukaryotic translation initiation factor 2 subunit 1 OS=Rattus norvegicus OX=10116 GN=Eif2s1 PE=1 SV=2"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"665.90277"	"1330.79827"	"1330.79824"	"0.02"	"0.00001"	"6/62"	"6"	"62"	"952097.00189209"	"HCD"	"MS2"	"0"	"77.7"	"100.000"	"56.2168"	"17878"	"17878"	"17858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.3"	""	"105.9"	""	"117.9"	""	"114.8"	""	"142.7"	"135.3"	""	"734"	"31"	"35.000"	"28.000"	"0.0318908477548073"	"27"	"0.004234"	"0.04844"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGLSPEK"	"[K].eLGLSPEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"665.90277"	"1330.79827"	"1330.79824"	"0.02"	"0.00001"	"5/68"	"5"	"68"	"1416748.98101807"	"HCD"	"MS2"	"9.723745"	"96.7"	"100.000"	"64.9582"	"21426"	"21426"	"21404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.1"	""	"104.3"	""	"125.6"	""	"162.3"	""	"199.4"	"202.2"	""	"734"	"14"	"35.000"	"28.000"	"1.34792604282797"	"20"	"0.004819"	"0.05718"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"665.90289"	"1330.79851"	"1330.79824"	"0.20"	"0.00014"	"7/66"	"7"	"66"	"2340879.02789307"	"HCD"	"MS2"	"0"	"176.4"	"100.000"	"52.0538"	"16151"	"16151"	"16132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.5"	""	"228.8"	""	"235.4"	""	"280.1"	"0.7"	"325.7"	"354.4"	""	"734"	"47"	"35.000"	"28.000"	"0.000735641234043015"	"22"	"0.0001686"	"0.001421"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"665.90448"	"1330.80168"	"1330.79824"	"2.59"	"0.00172"	"14/66"	"14"	"66"	"1300590.09484863"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"51.1689"	"15830"	"15830"	"15814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.1"	""	"142.3"	""	"134.6"	""	"170.8"	""	"196.9"	"178.1"	""	"747"	"51"	"35.000"	"28.000"	"0.000331352770496178"	"25"	"9.9E-05"	"0.0007756"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTLEPVEK"	"[R].gTLEPVEk.[SA]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"665.90454"	"1330.80181"	"1330.79824"	"2.68"	"0.00178"	"14/66"	"14"	"66"	"920887.49786377"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"51.4694"	"15916"	"15916"	"15885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.3"	""	"101.1"	""	"93.5"	""	"128.7"	""	"138.3"	"151.4"	""	"747"	"46"	"35.000"	"28.000"	"0.000929588208378474"	"23"	"9.9E-05"	"0.0005062"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"665.90771"	"1330.80815"	"1330.80947"	"-0.99"	"-0.00066"	"8/78"	"8"	"78"	"7172675.09643555"	"HCD"	"MS2"	"0.3286392"	"494.2"	"100.000"	"59.7854"	"19328"	"19328"	"19314"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"759.8"	""	"666.2"	""	"673.5"	""	"788.5"	""	"867.8"	"925.9"	""	"700"	"62"	"35.000"	"28.000"	"2.32845604670609E-05"	"25"	"0"	"0.0001265"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"665.90802"	"1330.80876"	"1330.80947"	"-0.53"	"-0.00035"	"8/78"	"8"	"78"	"7475991.22491455"	"HCD"	"MS2"	"0"	"522.8"	"100.000"	"59.9696"	"19370"	"19370"	"19353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"790.0"	""	"689.3"	""	"726.3"	""	"847.6"	""	"910.2"	"988.3"	""	"700"	"60"	"35.000"	"28.000"	"3.82004117757065E-05"	"25"	"0"	"4.631E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"665.90833"	"1330.80937"	"1330.80947"	"-0.07"	"-0.00005"	"8/78"	"8"	"78"	"2024747.48144531"	"HCD"	"MS2"	"0"	"150.0"	"100.000"	"60.0800"	"19447"	"19447"	"19429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.1"	""	"202.1"	""	"208.0"	""	"235.7"	"0.0"	"263.4"	"283.5"	""	"698"	"59"	"35.000"	"28.000"	"4.45477144275159E-05"	"25"	"0"	"5.824E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"665.90839"	"1330.80950"	"1330.80947"	"0.02"	"0.00001"	"8/78"	"8"	"78"	"1006256.24633789"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"60.2990"	"19503"	"19503"	"19480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.4"	""	"88.7"	""	"113.8"	""	"123.8"	""	"136.5"	"141.4"	""	"698"	"51"	"35.000"	"28.000"	"0.000256345339986833"	"25"	"0"	"4.917E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"665.90845"	"1330.80962"	"1330.80947"	"0.11"	"0.00007"	"8/78"	"8"	"78"	"1757055.0904541"	"HCD"	"MS2"	"12.00132"	"125.0"	"100.000"	"59.4908"	"19208"	"19208"	"19197"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.9"	""	"173.3"	""	"168.1"	""	"201.1"	"0.4"	"218.4"	"223.9"	""	"698"	"43"	"35.000"	"28.000"	"0.00192675026308984"	"21"	"0"	"5.274E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gNDIIAAAk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"665.90863"	"1330.80998"	"1330.80947"	"0.39"	"0.00026"	"8/78"	"8"	"78"	"1957402.80554199"	"HCD"	"MS2"	"9.358997"	"146.1"	"100.000"	"59.6727"	"19248"	"19248"	"19232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.7"	""	"203.4"	""	"187.5"	""	"255.0"	"2.1"	"256.4"	"257.2"	""	"693"	"55"	"35.000"	"28.000"	"0.000100624384977193"	"24"	"0"	"6.011E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANFENHSGR"	"[R].aANFENHSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.33624"	"1331.66521"	"1331.66538"	"-0.13"	"-0.00008"	"5/92"	"5"	"92"	"244255.501647949"	"HCD"	"MS2"	"28.0673"	"14.5"	"100.000"	"21.3879"	"3870"	"3870"	"3843"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.6"	""	"16.3"	""	"17.5"	""	"28.7"	""	"27.8"	"27.4"	""	"503"	"11"	"34.000"	"27.000"	"1.86439525687181"	"13"	"0.007178"	"0.09195"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANFENHSGR"	"[R].aANFENHSGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.33649"	"1331.66570"	"1331.66538"	"0.24"	"0.00016"	"4/92"	"4"	"92"	"187111.862609863"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"21.4573"	"3861"	"3861"	"3833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"13.9"	""	"11.7"	""	"21.0"	""	"21.7"	"26.3"	""	"497"	"5"	"33.000"	"26.000"	"7.16681828526962"	"13"	"0.006814"	"0.08504"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGEIYCK"	"[K].dGEIYck.[GV]"	"N-Term(TMT6plex); C6(Methylthio); K7(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"666.34155"	"1331.67583"	"1331.67397"	"1.40"	"0.00093"	"4/52"	"4"	"52"	"455035.268798828"	"HCD"	"MS2"	"10.63621"	"46.2"	"100.000"	"70.8590"	"23787"	"23787"	"23766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.1"	""	"62.9"	""	"76.3"	""	"57.8"	""	"88.4"	"86.3"	""	"546"	"7"	"34.000"	"27.000"	"5.34764595867135"	"13"	"0.006267"	"0.07776"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGELYCK"	"[K].dGELYck.[GV]"	"N-Term(TMT6plex); C6(Methylthio); K7(TMT6plex)"	"1"	"1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"666.34155"	"1331.67583"	"1331.67397"	"1.40"	"0.00093"	"4/52"	"4"	"52"	"455035.268798828"	"HCD"	"MS2"	"10.63621"	"46.2"	"100.000"	"70.8590"	"23787"	"23787"	"23766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.1"	""	"62.9"	""	"76.3"	""	"57.8"	""	"88.4"	"86.3"	""	"546"	"7"	"34.000"	"27.000"	"5.34764595867135"	"13"	"0.006267"	"0.07776"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"666.34296"	"1331.67864"	"1331.67930"	"-0.50"	"-0.00033"	"6/86"	"6"	"86"	"2055829.63934326"	"HCD"	"MS2"	"0"	"128.8"	"100.000"	"46.3594"	"13877"	"13877"	"13866"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"206.9"	""	"172.4"	""	"145.6"	""	"222.3"	"2.2"	"242.3"	"228.1"	""	"575"	"30"	"34.000"	"27.000"	"0.02875"	"21"	"9.9E-05"	"0.0008721"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"666.34344"	"1331.67961"	"1331.67930"	"0.24"	"0.00016"	"8/86"	"8"	"86"	"2380883.76428223"	"HCD"	"MS2"	"20.46616"	"144.2"	"100.000"	"46.8879"	"14053"	"14053"	"14044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"236.2"	""	"184.6"	""	"165.6"	""	"255.4"	""	"277.4"	"246.5"	""	"578"	"20"	"34.000"	"27.000"	"0.306124326576236"	"21"	"0.0001686"	"0.00164"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"666.34357"	"1331.67986"	"1331.67930"	"0.42"	"0.00028"	"8/86"	"8"	"86"	"1620850.76037598"	"HCD"	"MS2"	"0"	"100.9"	"100.000"	"46.5971"	"13938"	"13938"	"13928"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.5"	""	"153.6"	""	"112.2"	""	"177.2"	"2.8"	"175.4"	"160.8"	""	"578"	"33"	"34.000"	"27.000"	"0.0161026681441328"	"21"	"9.9E-05"	"0.0005063"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"666.34430"	"1331.68132"	"1331.67930"	"1.52"	"0.00101"	"8/86"	"8"	"86"	"789073.944030762"	"HCD"	"MS2"	"0"	"54.6"	"100.000"	"46.3251"	"13832"	"13832"	"13818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.2"	""	"76.4"	""	"62.5"	""	"107.2"	"3.6"	"82.7"	"90.4"	""	"585"	"29"	"34.000"	"27.000"	"0.0387369899044439"	"23"	"0.0001686"	"0.001903"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGNTLTYYR"	"[R].dGNTLTYYR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"666.34479"	"1331.68230"	"1331.67930"	"2.25"	"0.00150"	"8/86"	"8"	"86"	"993357.698791504"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"46.0822"	"13768"	"13768"	"13749"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.3"	""	"87.2"	""	"85.8"	""	"116.8"	""	"110.5"	"104.6"	""	"566"	"30"	"34.000"	"27.000"	"0.0272763613685583"	"20"	"0.0001686"	"0.001195"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEELQR"	"[K].sILDEELQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"666.37140"	"1331.73552"	"1331.73681"	"-0.97"	"-0.00064"	"8/76"	"8"	"76"	"803985.979248047"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"77.0494"	"26329"	"26329"	"26323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.9"	""	"56.4"	""	"62.3"	""	"74.1"	"0.4"	"117.7"	"95.1"	""	"946"	"36"	"36.000"	"29.000"	"0.0117722951154757"	""	"0"	"0.0001135"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SILDEELQR"	"[K].sILDEELQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4894"	"0.0000"	"1"	"1"	"1"	"666.37183"	"1331.73638"	"1331.73681"	"-0.33"	"-0.00022"	"7/76"	"7"	"76"	"708889.764709473"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"77.0054"	"26280"	"26280"	"26268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.1"	""	"55.5"	""	"59.0"	""	"62.3"	""	"99.2"	"88.1"	""	"939"	"47"	"36.000"	"29.000"	"0.000909150112072931"	""	"0"	"0.0001061"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"666.37207"	"1331.73686"	"1331.73681"	"0.04"	"0.00003"	"6/86"	"6"	"86"	"855277.214782715"	"HCD"	"MS2"	"37.74769"	"50.8"	"100.000"	"68.6014"	"22871"	"22871"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.0"	""	"58.5"	""	"69.9"	""	"82.6"	"0.7"	"92.5"	"90.1"	""	"962"	"44"	"36.000"	"29.000"	"0.00203303603461755"	"29"	"0"	"2.712E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"666.37213"	"1331.73699"	"1331.73681"	"0.13"	"0.00009"	"6/86"	"6"	"86"	"643286.048400879"	"HCD"	"MS2"	"8.012491"	"37.1"	"100.000"	"68.9646"	"23051"	"23051"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.3"	""	"43.9"	""	"50.7"	""	"54.5"	"0.1"	"67.7"	"72.8"	""	"960"	"44"	"36.000"	"29.000"	"0.00179573082370585"	"24"	"0"	"5.166E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"666.37219"	"1331.73711"	"1331.73681"	"0.22"	"0.00015"	"7/86"	"7"	"86"	"822897.417114258"	"HCD"	"MS2"	"53.01692"	"54.0"	"100.000"	"68.6396"	"22919"	"22919"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.1"	""	"68.5"	""	"76.1"	""	"83.0"	""	"97.5"	"100.3"	""	"960"	"44"	"36.000"	"29.000"	"0.00189339504996134"	""	"0"	"0.0001951"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDGGLETIR"	"[R].eIDGGLETIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"666.37225"	"1331.73723"	"1331.73681"	"0.31"	"0.00021"	"7/86"	"7"	"86"	"622599.914794922"	"HCD"	"MS2"	"5.97947"	"38.1"	"100.000"	"68.9034"	"22992"	"22992"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.1"	""	"46.3"	""	"49.1"	""	"58.8"	"0.3"	"63.4"	"77.1"	""	"960"	"47"	"36.000"	"29.000"	"0.000865448515612593"	"29"	"0"	"8.636E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"666.38110"	"1331.75493"	"1331.75710"	"-1.63"	"-0.00109"	"11/78"	"11"	"78"	"1264564.98773193"	"HCD"	"MS2"	"13.95095"	"102.9"	"100.000"	"39.0148"	"10901"	"10901"	"10874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.9"	""	"132.9"	""	"136.8"	""	"154.2"	"0.6"	"214.8"	"191.6"	""	"941"	"37"	"36.000"	"29.000"	"0.00945278168332408"	"28"	"0.0001686"	"0.001362"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"666.38135"	"1331.75542"	"1331.75710"	"-1.26"	"-0.00084"	"5/78"	"5"	"78"	"756914.546264648"	"HCD"	"MS2"	"0"	"64.4"	"100.000"	"39.1433"	"10918"	"10918"	"10889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.9"	""	"85.7"	""	"80.9"	""	"111.5"	"0.3"	"127.1"	"117.1"	""	"943"	"33"	"36.000"	"29.000"	"0.021851522265566"	"26"	"0.0001991"	"0.002816"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.0769"	"0.0000"	"1"	"1"	"1"	"444.59036"	"1331.75653"	"1331.75710"	"-0.43"	"-0.00019"	"5/78"	"5"	"78"	"4499245.76611328"	"HCD"	"MS2"	"36.10228"	"211.1"	"100.000"	"38.9508"	"10839"	"10839"	"10813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"318.7"	""	"265.6"	""	"274.5"	""	"340.3"	"1.7"	"404.3"	"395.8"	""	"941"	"26"	"36.000"	"29.000"	"0.112605506338874"	""	"0.002559"	"0.02589"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"666.38196"	"1331.75664"	"1331.75710"	"-0.35"	"-0.00023"	"12/78"	"12"	"78"	"3671342.96136475"	"HCD"	"MS2"	"7.950211"	"258.4"	"100.000"	"38.7095"	"10776"	"10776"	"10754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"410.6"	"2.6"	"327.1"	""	"365.7"	""	"409.0"	""	"473.3"	"460.4"	""	"941"	"43"	"36.000"	"29.000"	"0.00236352188370283"	"28"	"9.9E-05"	"0.0007009"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDITGEPK"	"[R].nDITGEPk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"666.38202"	"1331.75676"	"1331.75710"	"-0.26"	"-0.00017"	"12/78"	"12"	"78"	"4537849.73608398"	"HCD"	"MS2"	"2.346229"	"313.7"	"100.000"	"38.8203"	"10785"	"10785"	"10765"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"520.9"	""	"409.9"	""	"419.8"	""	"517.8"	""	"584.1"	"518.2"	""	"941"	"45"	"36.000"	"29.000"	"0.0015225081558539"	"29"	"0.0001686"	"0.001683"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETQTLLR"	"[R].lEETQTLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"666.38855"	"1331.76982"	"1331.77320"	"-2.53"	"-0.00169"	"7/80"	"7"	"80"	"814534.324523926"	"HCD"	"MS2"	"30.18586"	"52.5"	"100.000"	"77.5690"	"26505"	"26505"	"26487"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.7"	""	"62.5"	""	"68.3"	""	"69.5"	""	"149.7"	"98.2"	""	"903"	"43"	"36.000"	"29.000"	"0.00227330524867739"	"29"	"0.0001686"	"0.001373"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETQTLLR"	"[R].lEETQTLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"666.38892"	"1331.77056"	"1331.77320"	"-1.98"	"-0.00132"	"7/80"	"7"	"80"	"687080.201416016"	"HCD"	"MS2"	"24.40958"	"53.3"	"100.000"	"77.6382"	"26561"	"26561"	"26545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.7"	""	"67.2"	""	"67.1"	""	"72.6"	""	"140.7"	"101.9"	""	"903"	"40"	"36.000"	"29.000"	"0.00430187468056679"	"27"	"9.9E-05"	"0.0008558"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETQTLLR"	"[R].lEETQTLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"666.38971"	"1331.77214"	"1331.77320"	"-0.79"	"-0.00053"	"7/80"	"7"	"80"	"1558410.79449463"	"HCD"	"MS2"	"5.307945"	"86.6"	"100.000"	"77.8796"	"26631"	"26631"	"26613"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.9"	""	"100.9"	""	"100.2"	""	"148.8"	""	"207.9"	"166.3"	""	"906"	"43"	"36.000"	"29.000"	"0.00214337520309551"	"20"	"0"	"0.0003117"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETQTLLR"	"[R].lEETQTLLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"666.39020"	"1331.77312"	"1331.77320"	"-0.06"	"-0.00004"	"6/80"	"6"	"80"	"1418473.59588623"	"HCD"	"MS2"	"0"	"84.2"	"100.000"	"77.9530"	"26688"	"26688"	"26670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.0"	""	"94.5"	""	"98.8"	""	"134.0"	""	"202.1"	"172.6"	""	"914"	"42"	"36.000"	"29.000"	"0.00259965789395636"	"24"	"0"	"0.0002619"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"666.39978"	"1331.79228"	"1331.79349"	"-0.90"	"-0.00060"	"7/72"	"7"	"72"	"9368599.60681152"	"HCD"	"MS2"	"0.6333033"	"597.2"	"89.236"	"60.7777"	"19731"	"19731"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"913.2"	""	"697.3"	""	"714.7"	""	"1028.0"	""	"1116.7"	"1197.3"	""	"819"	"38"	"36.000"	"29.000"	"0.00670276365524688"	""	"0.0001991"	"0.00458"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"666.40002"	"1331.79277"	"1331.79349"	"-0.54"	"-0.00036"	"7/72"	"7"	"72"	"3483982.82073975"	"HCD"	"MS2"	"22.57747"	"245.6"	"100.000"	"60.4668"	"19604"	"19604"	"19586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"388.4"	""	"304.2"	""	"298.1"	""	"439.3"	""	"461.8"	"436.1"	""	"819"	"35"	"36.000"	"29.000"	"0.0133737717274572"	""	"0.0001991"	"0.002297"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"666.40002"	"1331.79277"	"1331.79349"	"-0.54"	"-0.00036"	"7/72"	"7"	"72"	"3966810.8203125"	"HCD"	"MS2"	"19.29868"	"277.0"	"100.000"	"60.5867"	"19620"	"19620"	"19602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"444.2"	""	"332.5"	""	"333.9"	""	"490.3"	""	"509.7"	"515.0"	""	"819"	"38"	"36.000"	"29.000"	"0.00716562218991797"	""	"0.0001991"	"0.002159"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4324"	"0.0000"	"1"	"1"	"1"	"666.40009"	"1331.79289"	"1331.79349"	"-0.45"	"-0.00030"	"7/72"	"7"	"72"	"1779370.24676514"	"HCD"	"MS2"	"2.316786"	"140.4"	"100.000"	"61.0746"	"19851"	"19851"	"19832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.8"	""	"150.9"	""	"170.1"	""	"220.8"	"0.9"	"271.7"	"302.2"	""	"819"	"37"	"36.000"	"29.000"	"0.00729884105269992"	""	"0.0001686"	"0.001249"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4857"	"0.0000"	"1"	"1"	"1"	"666.40021"	"1331.79314"	"1331.79349"	"-0.26"	"-0.00017"	"7/72"	"7"	"72"	"1272511.51556396"	"HCD"	"MS2"	"3.8905"	"103.7"	"100.000"	"61.2013"	"19871"	"19871"	"19849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.2"	""	"109.0"	""	"122.8"	""	"176.0"	""	"206.9"	"218.4"	""	"819"	"35"	"36.000"	"29.000"	"0.0144295871691898"	""	"9.9E-05"	"0.0008402"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILDEAGK"	"[R].qILDEAGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"666.40039"	"1331.79350"	"1331.79349"	"0.01"	"0.00001"	"7/72"	"7"	"72"	"9690363.2109375"	"HCD"	"MS2"	"0.2045025"	"659.8"	"97.431"	"60.8839"	"19742"	"19742"	"19725"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1030.7"	""	"738.3"	""	"786.9"	""	"1130.3"	""	"1245.4"	"1328.1"	""	"815"	"38"	"36.000"	"29.000"	"0.00667002732481832"	""	"0.0001991"	"0.004023"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIIAAAK"	"[K].gnDIIAAAk.[R]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"666.40088"	"1331.79448"	"1331.79349"	"0.75"	"0.00050"	"12/78"	"12"	"78"	"323647.671569824"	"HCD"	"MS2"	"22.60661"	"27.8"	"100.000"	"67.4335"	"22397"	"22397"	"22375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"36.8"	""	"36.7"	""	"45.7"	""	"53.7"	"55.7"	""	"824"	"36"	"36.000"	"29.000"	"0.0114524186631683"	"22"	"0"	"0.000233"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVAQGGGK"	"[R].gTVVAQGGGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"Q32PZ3"	"Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1"	"0"	"2"	"2"	"0.5106"	"0.0000"	"1"	"1"	"1"	"666.40540"	"1331.80351"	"1331.80472"	"-0.91"	"-0.00060"	"8/80"	"8"	"80"	"420387.93145752"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"32.7201"	"8311"	"8311"	"8282"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.1"	""	"43.0"	""	"49.3"	""	"51.7"	"1.0"	"57.6"	"58.0"	""	"779"	"47"	"35.000"	"28.000"	"0.000725282939730187"	""	"0"	"2.407E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVNEAVK"	"[R].lTVNEAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"666.41736"	"1331.82744"	"1331.82987"	"-1.83"	"-0.00122"	"14/70"	"14"	"70"	"682117.226013184"	"HCD"	"MS2"	"15.72187"	"64.6"	"100.000"	"62.7520"	"20530"	"20530"	"20510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.3"	""	"86.9"	""	"104.2"	""	"86.5"	""	"110.0"	"122.6"	""	"675"	"51"	"35.000"	"28.000"	"0.000245625684031178"	""	"0"	"0.0003578"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVNEAVK"	"[R].lTVNEAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"666.41791"	"1331.82854"	"1331.82987"	"-1.00"	"-0.00067"	"7/70"	"7"	"70"	"313743.930236816"	"HCD"	"MS2"	"46.38073"	"32.1"	"100.000"	"63.0620"	"20624"	"20624"	"20593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.8"	""	"42.3"	""	"49.5"	""	"44.6"	"0.8"	"62.8"	"58.8"	""	"674"	"26"	"35.000"	"28.000"	"0.0834891233422418"	"23"	"0.0001991"	"0.00252"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVNEAVK"	"[R].lTVNEAVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"666.41864"	"1331.83000"	"1331.82987"	"0.10"	"0.00007"	"14/70"	"14"	"70"	"613886.819519043"	"HCD"	"MS2"	"34.36555"	"59.7"	"100.000"	"62.7443"	"20494"	"20494"	"20469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.2"	""	"96.6"	""	"86.6"	""	"81.8"	""	"102.2"	"118.9"	""	"667"	"49"	"35.000"	"28.000"	"0.000390028046905127"	""	"0"	"8.484E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPDVDMK"	"[R].vAPDVDMk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"666.88208"	"1332.75688"	"1332.75974"	"-2.15"	"-0.00143"	"7/60"	"7"	"60"	"1597319.55859375"	"HCD"	"MS2"	"0"	"127.4"	"100.000"	"63.7729"	"20913"	"20913"	"20894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"222.8"	""	"184.7"	""	"194.3"	""	"134.3"	""	"231.0"	"241.6"	""	"953"	"33"	"36.000"	"29.000"	"0.0225976305976507"	"21"	"0.004792"	"0.05659"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPDVDMK"	"[R].vAPDVDMk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6PTT0; Q6AYS7"	"Aminoacylase-1B OS=Rattus norvegicus OX=10116 GN=Acy1b PE=1 SV=1; Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"666.88269"	"1332.75810"	"1332.75974"	"-1.23"	"-0.00082"	"6/60"	"6"	"60"	"1580131.29730225"	"HCD"	"MS2"	"19.43813"	"124.1"	"100.000"	"63.6960"	"20914"	"20914"	"20889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.1"	"3.0"	"183.7"	""	"194.2"	""	"132.3"	"3.2"	"222.1"	"223.9"	""	"969"	"32"	"36.000"	"29.000"	"0.0300119200874701"	"21"	"0.0001991"	"0.002053"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLESSIQGLR"	"[K].tLESSIQGLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"666.88776"	"1332.76824"	"1332.76845"	"-0.16"	"-0.00010"	"8/86"	"8"	"86"	"1250698.09637451"	"HCD"	"MS2"	"21.42327"	"68.4"	"100.000"	"74.1710"	"25161"	"25161"	"25142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.2"	""	"103.2"	""	"92.0"	""	"117.0"	""	"129.7"	"118.7"	""	"950"	"53"	"36.000"	"29.000"	"0.000239714116342676"	"29"	"0"	"9.243E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLESSIQGLR"	"[K].tLESSIQGLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"666.88800"	"1332.76872"	"1332.76845"	"0.21"	"0.00014"	"8/86"	"8"	"86"	"2221729.70782471"	"HCD"	"MS2"	"6.331902"	"120.6"	"100.000"	"74.3175"	"25191"	"25191"	"25171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.5"	""	"164.1"	""	"170.6"	""	"199.0"	""	"225.6"	"221.4"	""	"954"	"55"	"36.000"	"29.000"	"0.000148771033161281"	""	"0"	"1.934E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLESSIQGLR"	"[K].tLESSIQGLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"Q99PD4"	"Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus OX=10116 GN=Arpc1a PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"666.88824"	"1332.76921"	"1332.76845"	"0.58"	"0.00038"	"8/86"	"8"	"86"	"1014915.44500732"	"HCD"	"MS2"	"21.02995"	"63.4"	"100.000"	"74.0224"	"25071"	"25071"	"25052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.3"	""	"85.0"	""	"79.9"	""	"103.1"	""	"117.2"	"121.9"	""	"947"	"53"	"36.000"	"29.000"	"0.00026626861747763"	"29"	"0"	"3.965E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEALGDK"	"[R].iEEALGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"666.89166"	"1332.77605"	"1332.77750"	"-1.09"	"-0.00073"	"7/66"	"7"	"66"	"810095.531066895"	"HCD"	"MS2"	"37.5839"	"65.5"	"100.000"	"75.1910"	"25544"	"25544"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.6"	""	"48.9"	""	"51.7"	""	"51.3"	""	"58.3"	"290.0"	""	"946"	"48"	"36.000"	"29.000"	"0.000816321322911366"	""	"0"	"0.0003377"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"666.89172"	"1332.77617"	"1332.77750"	"-1.00"	"-0.00067"	"7/68"	"7"	"68"	"730348.843688965"	"HCD"	"MS2"	"46.41061"	"54.8"	"100.000"	"83.4085"	"28901"	"28901"	"28878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"56.3"	""	"63.6"	""	"87.5"	"0.4"	"108.9"	"129.6"	""	"937"	"47"	"36.000"	"29.000"	"0.000994740030447103"	""	"9.9E-05"	"0.0004839"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIQDLEK"	"[K].eIQDLEk.[A]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"3"	"666.89209"	"1332.77690"	"1332.77750"	"-0.45"	"-0.00030"	"6/66"	"6"	"66"	"500465.45703125"	"HCD"	"MS2"	"65.05475"	"44.1"	"100.000"	"63.4752"	"20824"	"20824"	"20798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.4"	""	"53.6"	""	"54.9"	""	"65.4"	""	"88.1"	"86.9"	""	"934"	"16"	"36.000"	"29.000"	"1.10998441385382"	"25"	"0.006423"	"0.08015"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"666.89221"	"1332.77715"	"1332.77750"	"-0.27"	"-0.00018"	"7/68"	"7"	"68"	"1601458.9675293"	"HCD"	"MS2"	"9.036028"	"112.5"	"100.000"	"83.9470"	"29090"	"29090"	"29076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.3"	""	"131.8"	""	"114.2"	""	"170.2"	""	"237.8"	"292.2"	""	"934"	"47"	"36.000"	"29.000"	"0.000919002897293096"	""	"0"	"0.0003325"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"666.89221"	"1332.77715"	"1332.77750"	"-0.27"	"-0.00018"	"7/68"	"7"	"68"	"3364170.61431885"	"HCD"	"MS2"	"7.419692"	"237.8"	"100.000"	"83.6993"	"29019"	"29019"	"29004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.5"	""	"241.4"	""	"242.7"	""	"370.0"	""	"491.5"	"643.6"	""	"934"	"46"	"36.000"	"29.000"	"0.00112283742760324"	""	"0.0001686"	"0.001291"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDPSK"	"[K].sLDLDPSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"666.89227"	"1332.77727"	"1332.77750"	"-0.18"	"-0.00012"	"11/68"	"11"	"68"	"1428002.76739502"	"HCD"	"MS2"	"9.579591"	"111.0"	"100.000"	"71.7111"	"24134"	"24134"	"24116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"185.0"	""	"123.9"	""	"139.3"	""	"183.4"	""	"218.7"	"201.6"	""	"935"	"35"	"36.000"	"29.000"	"0.0134828472771169"	""	"0.0007633"	"0.007407"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDPSK"	"[K].sLDLDPSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"666.89227"	"1332.77727"	"1332.77750"	"-0.18"	"-0.00012"	"7/68"	"7"	"68"	"3742980.22247314"	"HCD"	"MS2"	"1.597411"	"246.0"	"100.000"	"71.4692"	"24066"	"24066"	"24050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"485.9"	""	"317.9"	""	"312.3"	""	"377.0"	""	"454.3"	"381.5"	""	"935"	"49"	"36.000"	"29.000"	"0.000626298851371625"	""	"0.0001686"	"0.001224"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDPSK"	"[K].sLDLDPSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"666.89233"	"1332.77739"	"1332.77750"	"-0.08"	"-0.00006"	"11/68"	"11"	"68"	"734362.858642578"	"HCD"	"MS2"	"43.20704"	"60.3"	"100.000"	"71.0826"	"23878"	"23878"	"23854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.9"	""	"71.6"	""	"83.4"	""	"96.4"	"0.8"	"104.6"	"93.1"	""	"942"	"25"	"36.000"	"29.000"	"0.161072317423957"	"29"	"0.0001991"	"0.005207"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDPSK"	"[K].sLDLDPSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"666.89233"	"1332.77739"	"1332.77750"	"-0.08"	"-0.00006"	"7/68"	"7"	"68"	"1728574.66973877"	"HCD"	"MS2"	"2.168592"	"128.4"	"100.000"	"71.7730"	"24190"	"24190"	"24171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.9"	""	"146.7"	""	"168.0"	""	"198.6"	""	"242.4"	"216.8"	""	"942"	"47"	"36.000"	"29.000"	"0.00105443765626569"	""	"0.0001991"	"0.003634"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEALGDK"	"[R].iEEALGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"666.89246"	"1332.77764"	"1332.77750"	"0.10"	"0.00007"	"14/66"	"14"	"66"	"2393004.58630371"	"HCD"	"MS2"	"7.307485"	"178.2"	"100.000"	"75.4836"	"25663"	"25663"	"25647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.3"	""	"90.5"	""	"92.6"	""	"60.9"	""	"73.2"	"1054.4"	""	"942"	"48"	"36.000"	"29.000"	"0.00073285981248599"	""	"9.9E-05"	"0.0009916"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDPSK"	"[K].sLDLDPSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"666.89252"	"1332.77776"	"1332.77750"	"0.19"	"0.00013"	"7/68"	"7"	"68"	"4018973.93951416"	"HCD"	"MS2"	"2.796079"	"271.5"	"100.000"	"71.4053"	"24009"	"24009"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"538.7"	""	"348.4"	""	"344.1"	""	"445.1"	"1.2"	"474.5"	"414.9"	""	"942"	"49"	"36.000"	"29.000"	"0.000620898923860068"	""	"9.9E-05"	"0.0005505"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEALGDK"	"[R].iEEALGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"666.89258"	"1332.77788"	"1332.77750"	"0.28"	"0.00019"	"7/66"	"7"	"66"	"729701.128479004"	"HCD"	"MS2"	"55.49914"	"58.5"	"100.000"	"75.2934"	"25617"	"25617"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.6"	""	"50.3"	""	"45.2"	""	"45.8"	""	"51.6"	"256.3"	""	"942"	"35"	"36.000"	"29.000"	"0.0159228537853017"	""	"9.9E-05"	"0.001015"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"666.89264"	"1332.77800"	"1332.77750"	"0.37"	"0.00025"	"7/68"	"7"	"68"	"3040113.7723999"	"HCD"	"MS2"	"8.476221"	"209.5"	"100.000"	"83.6563"	"28973"	"28973"	"28957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.2"	"3.0"	"197.8"	""	"213.1"	""	"320.9"	"0.5"	"450.8"	"574.2"	""	"940"	"46"	"36.000"	"29.000"	"0.0011326555514827"	""	"9.9E-05"	"0.0006273"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEALGDK"	"[R].iEEALGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"666.89276"	"1332.77825"	"1332.77750"	"0.56"	"0.00037"	"7/66"	"7"	"66"	"591199.899047852"	"HCD"	"MS2"	"19.00978"	"51.3"	"100.000"	"75.7966"	"25790"	"25790"	"25771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.4"	""	"34.2"	""	"37.6"	""	"36.1"	""	"49.0"	"252.1"	""	"976"	"46"	"36.000"	"29.000"	"0.00124858991280995"	""	"0"	"0.0001619"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"666.89288"	"1332.77849"	"1332.77750"	"0.74"	"0.00049"	"7/68"	"7"	"68"	"1439537.8637085"	"HCD"	"MS2"	"12.48124"	"101.7"	"100.000"	"84.0016"	"29141"	"29141"	"29130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.8"	""	"109.9"	""	"108.5"	""	"140.5"	"1.3"	"223.5"	"261.3"	""	"976"	"42"	"36.000"	"29.000"	"0.0032316165380646"	""	"9.9E-05"	"0.0009746"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEALGDK"	"[R].iEEALGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.3514"	"0.0000"	"1"	"1"	"1"	"666.89288"	"1332.77849"	"1332.77750"	"0.74"	"0.00049"	"12/66"	"12"	"66"	"2488929.62408447"	"HCD"	"MS2"	"7.42074"	"189.5"	"100.000"	"75.6161"	"25748"	"25748"	"25729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"336.9"	""	"99.4"	""	"117.5"	""	"56.9"	""	"76.3"	"1121.8"	""	"976"	"37"	"36.000"	"29.000"	"0.00875830009894272"	""	"0.0001686"	"0.0017"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDLDPSK"	"[K].sLDLDPSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"666.89301"	"1332.77873"	"1332.77750"	"0.92"	"0.00062"	"10/68"	"10"	"68"	"628867.153076172"	"HCD"	"MS2"	"46.83175"	"55.0"	"100.000"	"71.1606"	"23941"	"23941"	"23916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.0"	""	"69.2"	""	"70.8"	""	"86.4"	""	"97.4"	"94.1"	""	"976"	"24"	"36.000"	"29.000"	"0.18047615173277"	"28"	"0.0007633"	"0.007503"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAALEDK"	"[R].dLAALEDk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"666.89301"	"1332.77873"	"1332.77750"	"0.92"	"0.00062"	"7/68"	"7"	"68"	"713036.149536133"	"HCD"	"MS2"	"41.3189"	"53.5"	"100.000"	"83.3655"	"28855"	"28855"	"28832"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.7"	""	"63.6"	""	"61.0"	""	"81.3"	""	"106.6"	"117.4"	""	"976"	"49"	"36.000"	"29.000"	"0.000596238234160457"	""	"0"	"0.0003169"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEALGDK"	"[R].iEEALGDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"666.89386"	"1332.78044"	"1332.77750"	"2.21"	"0.00147"	"7/66"	"7"	"66"	"503292.99987793"	"HCD"	"MS2"	"29.13399"	"43.8"	"100.000"	"75.9199"	"25872"	"25872"	"25849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.9"	""	"30.1"	""	"42.1"	""	"30.7"	""	"36.6"	"203.6"	""	"941"	"38"	"36.000"	"29.000"	"0.00705601715103867"	""	"0.0001991"	"0.003341"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEAEIALK"	"[K].tEAEIALk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"666.90967"	"1332.81206"	"1332.81389"	"-1.37"	"-0.00091"	"7/62"	"7"	"62"	"979243.328308105"	"HCD"	"MS2"	"0"	"79.2"	"100.000"	"66.2482"	"21919"	"21919"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.1"	""	"94.5"	""	"97.0"	""	"118.9"	"0.5"	"160.6"	"195.0"	""	"866"	"44"	"36.000"	"29.000"	"0.00189883792136569"	""	"9.9E-05"	"0.0007144"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEAEIALK"	"[K].tEAEIALk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3556"	"0.0000"	"1"	"1"	"1"	"666.90973"	"1332.81218"	"1332.81389"	"-1.28"	"-0.00085"	"7/62"	"7"	"62"	"1027133.03070068"	"HCD"	"MS2"	"0"	"81.8"	"100.000"	"66.2379"	"21948"	"21948"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.2"	""	"95.9"	""	"105.3"	""	"131.6"	"0.2"	"163.3"	"189.9"	""	"866"	"45"	"36.000"	"29.000"	"0.00135671271862865"	""	"0"	"0.0003176"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"666.91003"	"1332.81279"	"1332.81389"	"-0.82"	"-0.00055"	"14/64"	"14"	"64"	"7123697.15545654"	"HCD"	"MS2"	"1.145008"	"459.7"	"100.000"	"80.4419"	"27674"	"27674"	"27660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"607.4"	""	"656.4"	""	"694.5"	""	"807.6"	""	"749.8"	"838.0"	""	"862"	"54"	"36.000"	"29.000"	"0.000174774178778253"	""	"0.0001686"	"0.001711"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESILDGLK"	"[R].eSILDGLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"666.91022"	"1332.81316"	"1332.81389"	"-0.55"	"-0.00037"	"7/64"	"7"	"64"	"1877894.07061768"	"HCD"	"MS2"	"21.18498"	"114.7"	"100.000"	"91.6356"	"32181"	"32181"	"32164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.3"	""	"134.5"	""	"158.0"	""	"196.0"	""	"201.3"	"218.8"	""	"862"	"46"	"36.000"	"29.000"	"0.00114677250077329"	""	"0"	"0.0003363"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLIDGIK"	"[R].eSLIDGIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"666.91022"	"1332.81316"	"1332.81389"	"-0.55"	"-0.00037"	"7/64"	"7"	"64"	"1877894.07061768"	"HCD"	"MS2"	"21.18498"	"114.7"	"100.000"	"91.6356"	"32181"	"32181"	"32164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.3"	""	"134.5"	""	"158.0"	""	"196.0"	""	"201.3"	"218.8"	""	"862"	"46"	"36.000"	"29.000"	"0.00114677250077329"	""	"0"	"0.0003363"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESILDGLK"	"[R].eSILDGLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"666.91040"	"1332.81352"	"1332.81389"	"-0.27"	"-0.00018"	"7/64"	"7"	"64"	"892271.00769043"	"HCD"	"MS2"	"43.7802"	"60.6"	"100.000"	"91.2240"	"32050"	"32050"	"32030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.1"	""	"79.6"	""	"73.9"	""	"115.1"	""	"101.6"	"106.0"	""	"862"	"32"	"36.000"	"29.000"	"0.0273827631628101"	"27"	"9.9E-05"	"0.000887"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLIDGIK"	"[R].eSLIDGIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"666.91040"	"1332.81352"	"1332.81389"	"-0.27"	"-0.00018"	"7/64"	"7"	"64"	"892271.00769043"	"HCD"	"MS2"	"43.7802"	"60.6"	"100.000"	"91.2240"	"32050"	"32050"	"32030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.1"	""	"79.6"	""	"73.9"	""	"115.1"	""	"101.6"	"106.0"	""	"862"	"32"	"36.000"	"29.000"	"0.0273827631628101"	"27"	"9.9E-05"	"0.000887"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"666.91040"	"1332.81352"	"1332.81389"	"-0.27"	"-0.00018"	"7/64"	"7"	"64"	"1031543.12261963"	"HCD"	"MS2"	"31.45528"	"72.4"	"100.000"	"80.1745"	"27593"	"27593"	"27570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.7"	""	"104.7"	""	"96.2"	""	"133.6"	""	"113.5"	"143.1"	""	"862"	"52"	"36.000"	"29.000"	"0.000271317164811452"	""	"0"	"0.0001364"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"666.91040"	"1332.81352"	"1332.81389"	"-0.27"	"-0.00018"	"14/64"	"14"	"64"	"2072441.75909424"	"HCD"	"MS2"	"9.306658"	"147.2"	"100.000"	"80.1632"	"27561"	"27561"	"27540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.9"	""	"211.9"	""	"208.0"	""	"263.1"	""	"241.7"	"274.4"	""	"862"	"54"	"36.000"	"29.000"	"0.000186843188585025"	""	"9.9E-05"	"0.0005649"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESILDGLK"	"[R].eSILDGLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"666.91040"	"1332.81352"	"1332.81389"	"-0.27"	"-0.00018"	"7/64"	"7"	"64"	"1265951.5758667"	"HCD"	"MS2"	"30.18822"	"79.4"	"100.000"	"91.3449"	"32062"	"32062"	"32042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.7"	""	"101.0"	""	"107.1"	""	"152.3"	""	"125.9"	"142.6"	""	"862"	"46"	"36.000"	"29.000"	"0.00117890082103819"	""	"9.9E-05"	"0.0006505"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLIDGIK"	"[R].eSLIDGIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"666.91040"	"1332.81352"	"1332.81389"	"-0.27"	"-0.00018"	"7/64"	"7"	"64"	"1265951.5758667"	"HCD"	"MS2"	"30.18822"	"79.4"	"100.000"	"91.3449"	"32062"	"32062"	"32042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.7"	""	"101.0"	""	"107.1"	""	"152.3"	""	"125.9"	"142.6"	""	"862"	"46"	"36.000"	"29.000"	"0.00117890082103819"	""	"9.9E-05"	"0.0006505"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESILDGLK"	"[R].eSILDGLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"B5DFN2"	"S-adenosylhomocysteine hydrolase-like protein 1 OS=Rattus norvegicus OX=10116 GN=Ahcyl1 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"666.91046"	"1332.81365"	"1332.81389"	"-0.18"	"-0.00012"	"7/64"	"7"	"64"	"2288018.72680664"	"HCD"	"MS2"	"15.982"	"140.2"	"100.000"	"91.5194"	"32170"	"32170"	"32153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"219.8"	""	"179.6"	""	"187.0"	""	"245.3"	"0.9"	"242.0"	"252.7"	""	"862"	"48"	"36.000"	"29.000"	"0.000728580041538246"	""	"9.9E-05"	"0.0006192"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLIDGIK"	"[R].eSLIDGIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"666.91046"	"1332.81365"	"1332.81389"	"-0.18"	"-0.00012"	"7/64"	"7"	"64"	"2288018.72680664"	"HCD"	"MS2"	"15.982"	"140.2"	"100.000"	"91.5194"	"32170"	"32170"	"32153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"219.8"	""	"179.6"	""	"187.0"	""	"245.3"	"0.9"	"242.0"	"252.7"	""	"862"	"48"	"36.000"	"29.000"	"0.000728580041538246"	""	"9.9E-05"	"0.0006192"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"666.91058"	"1332.81389"	"1332.81389"	"0.00"	"0.00000"	"14/64"	"14"	"64"	"2737033.5145874"	"HCD"	"MS2"	"2.59178"	"189.0"	"100.000"	"80.7529"	"27800"	"27800"	"27782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.7"	""	"259.7"	""	"289.5"	""	"325.5"	"0.5"	"323.0"	"371.3"	""	"844"	"54"	"36.000"	"29.000"	"0.000171914477233336"	""	"9.9E-05"	"0.0008982"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"666.91077"	"1332.81426"	"1332.81389"	"0.28"	"0.00018"	"14/64"	"14"	"64"	"7293175.92541504"	"HCD"	"MS2"	"0.8474732"	"490.4"	"100.000"	"80.4854"	"27718"	"27718"	"27700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"660.2"	""	"700.8"	""	"732.7"	""	"855.3"	""	"762.1"	"936.1"	""	"844"	"54"	"36.000"	"29.000"	"0.000172707998406065"	""	"0.0001686"	"0.00161"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEELATK"	"[K].aLEELATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"666.91107"	"1332.81487"	"1332.81389"	"0.73"	"0.00049"	"14/64"	"14"	"64"	"3287352.26977539"	"HCD"	"MS2"	"1.650951"	"220.7"	"100.000"	"80.7965"	"27845"	"27845"	"27827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.6"	""	"291.1"	""	"341.2"	""	"396.3"	""	"346.5"	"430.1"	""	"840"	"57"	"36.000"	"29.000"	"9.20978072847187E-05"	""	"9.9E-05"	"0.0007439"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDMLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"667.35272"	"1333.69817"	"1333.69832"	"-0.11"	"-0.00007"	"13/82"	"13"	"82"	"1558296.85913086"	"HCD"	"MS2"	"26.03293"	"75.2"	"100.000"	"60.2137"	"19502"	"19502"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.4"	""	"106.9"	""	"110.7"	""	"87.2"	""	"137.2"	"153.1"	""	"745"	"36"	"35.000"	"28.000"	"0.00891510119261006"	"21"	"9.9E-05"	"0.0005325"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEDMLGR"	"[R].tPVSEDMLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"667.35303"	"1333.69878"	"1333.69832"	"0.35"	"0.00023"	"8/82"	"8"	"82"	"1576718.17022705"	"HCD"	"MS2"	"23.20224"	"79.4"	"100.000"	"60.3288"	"19515"	"19515"	"19496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.7"	""	"118.3"	""	"110.6"	""	"94.9"	"0.6"	"156.0"	"159.5"	""	"746"	"39"	"35.000"	"28.000"	"0.00486081208362707"	"21"	"0"	"0.0002616"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"667.35760"	"1333.70793"	"1333.70955"	"-1.21"	"-0.00081"	"8/86"	"8"	"86"	"5161478.12011719"	"HCD"	"MS2"	"29.31194"	"273.7"	"100.000"	"55.1805"	"17461"	"17461"	"17442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"506.9"	""	"342.1"	""	"358.0"	""	"309.4"	""	"497.0"	"585.7"	""	"726"	"27"	"35.000"	"28.000"	"0.0725949858676687"	"27"	"0.0001686"	"0.001096"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"667.35773"	"1333.70818"	"1333.70955"	"-1.03"	"-0.00069"	"8/86"	"8"	"86"	"1761928.91638184"	"HCD"	"MS2"	"21.90685"	"123.6"	"100.000"	"55.4857"	"17586"	"17586"	"17568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.8"	""	"155.4"	""	"159.7"	""	"152.0"	""	"222.4"	"275.6"	""	"767"	"21"	"35.000"	"28.000"	"0.281686068438253"	"28"	"9.9E-05"	"0.0009595"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"667.35773"	"1333.70818"	"1333.70955"	"-1.03"	"-0.00069"	"8/86"	"8"	"86"	"1593009.54846191"	"HCD"	"MS2"	"17.39258"	"110.7"	"100.000"	"55.8607"	"17704"	"17704"	"17690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.3"	""	"144.4"	""	"148.3"	""	"132.6"	""	"212.9"	"244.0"	""	"767"	"19"	"35.000"	"28.000"	"0.536741738206599"	"21"	"0.0001686"	"0.001373"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTMQNLNDR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"667.35815"	"1333.70903"	"1333.70955"	"-0.39"	"-0.00026"	"13/86"	"13"	"86"	"6041649.09771729"	"HCD"	"MS2"	"21.52696"	"308.9"	"100.000"	"55.5532"	"17579"	"17579"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"531.3"	""	"378.8"	""	"433.4"	""	"348.9"	""	"570.5"	"671.7"	""	"760"	"32"	"35.000"	"28.000"	"0.0263501806286296"	""	"9.9E-05"	"0.0008173"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMTQNVER"	"[K].nIMTQNVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.9796"	"0.0000"	"1"	"1"	"1"	"667.35828"	"1333.70928"	"1333.70955"	"-0.21"	"-0.00014"	"7/88"	"7"	"88"	"1152836.71606445"	"HCD"	"MS2"	"46.01664"	"83.2"	"100.000"	"41.3967"	"11859"	"11859"	"11830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.9"	""	"104.7"	""	"98.4"	""	"116.7"	""	"187.7"	"179.8"	""	"760"	"49"	"35.000"	"28.000"	"0.000513787574013826"	"16"	"0"	"6.165E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIMTQNVER"	"[K].nIMTQNVER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"667.35858"	"1333.70989"	"1333.70955"	"0.25"	"0.00017"	"7/88"	"7"	"88"	"1437987.57293701"	"HCD"	"MS2"	"22.77086"	"99.8"	"100.000"	"41.5877"	"11902"	"11902"	"11880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.6"	""	"105.2"	""	"117.3"	""	"150.8"	"1.3"	"216.2"	"220.9"	""	"796"	"40"	"35.000"	"29.000"	"0.00417717886603624"	"19"	"0"	"0.0002343"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPALYASNVR"	"[R].nPALYASNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.37335"	"1333.73943"	"1333.74256"	"-2.35"	"-0.00157"	"7/90"	"7"	"90"	"633633.005310059"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"48.4764"	"14700"	"14700"	"14678"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.9"	""	"39.1"	""	"45.1"	""	"73.2"	""	"80.0"	"85.9"	""	"881"	"29"	"36.000"	"29.000"	"0.0532041994364537"	"14"	"0.0001686"	"0.001325"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYGGPVGAGIR"	"[R].sAYGGPVGAGIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"667.37390"	"1333.74053"	"1333.74256"	"-1.53"	"-0.00102"	"8/88"	"8"	"88"	"527609.557189941"	"HCD"	"MS2"	"10.36275"	"39.5"	"100.000"	"47.5770"	"14371"	"14371"	"14347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"35.5"	""	"45.0"	""	"82.8"	""	"82.1"	"84.3"	""	"878"	"30"	"36.000"	"29.000"	"0.0392161107358916"	"25"	"0.0001991"	"0.002588"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYGGPVGAGIR"	"[R].sAYGGPVGAGIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"667.37396"	"1333.74065"	"1333.74256"	"-1.44"	"-0.00096"	"9/88"	"9"	"88"	"795739.949707031"	"HCD"	"MS2"	"8.637834"	"52.8"	"100.000"	"47.8163"	"14431"	"14431"	"14406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.6"	""	"59.9"	""	"63.2"	""	"109.6"	"1.3"	"105.9"	"110.1"	""	"878"	"56"	"36.000"	"29.000"	"0.000111805848088483"	"22"	"0"	"7.802E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYGGPVGAGIR"	"[R].sAYGGPVGAGIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"667.37445"	"1333.74162"	"1333.74256"	"-0.70"	"-0.00047"	"11/88"	"11"	"88"	"2472256.92260742"	"HCD"	"MS2"	"20.59319"	"122.0"	"100.000"	"46.9237"	"14105"	"14105"	"14088"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.7"	""	"138.0"	""	"135.7"	""	"305.5"	"0.6"	"227.4"	"232.5"	""	"893"	"62"	"36.000"	"29.000"	"2.59311312423266E-05"	"27"	"0"	"4.844E-07"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPALYASNVR"	"[R].nPALYASNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.37451"	"1333.74175"	"1333.74256"	"-0.61"	"-0.00041"	"6/90"	"6"	"90"	"578897.741943359"	"HCD"	"MS2"	"28.32972"	"39.7"	"100.000"	"48.2066"	"14628"	"14628"	"14605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"47.4"	""	"46.2"	""	"76.4"	"1.5"	"90.1"	"79.0"	""	"893"	"22"	"36.000"	"29.000"	"0.281722454310406"	"14"	"0.0001991"	"0.002172"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYGGPVGAGIR"	"[R].sAYGGPVGAGIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8451"	"0.0000"	"1"	"1"	"1"	"667.37463"	"1333.74199"	"1333.74256"	"-0.43"	"-0.00029"	"10/88"	"10"	"88"	"7855166.35803223"	"HCD"	"MS2"	"0"	"351.7"	"100.000"	"47.2227"	"14227"	"14227"	"14209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.7"	""	"356.9"	""	"336.0"	""	"916.4"	"3.9"	"741.2"	"701.3"	""	"891"	"71"	"36.000"	"29.000"	"3.22736220213408E-06"	"28"	"0"	"5.738E-08"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYGGPVGAGIR"	"[R].sAYGGPVGAGIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.7460"	"0.0000"	"1"	"1"	"1"	"667.37488"	"1333.74248"	"1333.74256"	"-0.06"	"-0.00004"	"11/88"	"11"	"88"	"1526285.79040527"	"HCD"	"MS2"	"20.51599"	"84.7"	"100.000"	"47.2275"	"14191"	"14191"	"14172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.4"	""	"89.9"	""	"86.0"	""	"205.5"	""	"161.1"	"172.9"	""	"885"	"63"	"36.000"	"29.000"	"2.33299213679599E-05"	""	"0"	"1.631E-06"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYGGPVGAGIR"	"[R].sAYGGPVGAGIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.8451"	"0.0000"	"1"	"1"	"1"	"667.37488"	"1333.74248"	"1333.74256"	"-0.06"	"-0.00004"	"10/88"	"10"	"88"	"9805181.5914917"	"HCD"	"MS2"	"0.5162424"	"383.1"	"100.000"	"47.5080"	"14305"	"14305"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.4"	""	"378.6"	""	"344.2"	""	"1040.5"	"0.5"	"802.2"	"772.9"	""	"885"	"71"	"36.000"	"29.000"	"3.139881623238E-06"	"28"	"0"	"7.241E-08"	"1.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPALYASNVR"	"[R].nPALYASNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"667.37518"	"1333.74309"	"1333.74256"	"0.39"	"0.00026"	"7/90"	"7"	"90"	"1383937.98327637"	"HCD"	"MS2"	"19.63983"	"79.7"	"100.000"	"47.8877"	"14498"	"14498"	"14474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.4"	""	"92.1"	""	"111.3"	""	"143.8"	"1.2"	"138.4"	"183.1"	""	"814"	"40"	"36.000"	"29.000"	"0.0037462297570354"	"16"	"0"	"7.645E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPALYASNVR"	"[R].nPALYASNVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"Q1HAQ0"	"Lysophosphatidylcholine acyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Lpcat1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.37622"	"1333.74516"	"1333.74256"	"1.95"	"0.00130"	"7/90"	"7"	"90"	"1252560.65710449"	"HCD"	"MS2"	"21.88462"	"70.3"	"100.000"	"48.1573"	"14570"	"14570"	"14541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.5"	""	"77.4"	""	"92.6"	""	"119.4"	""	"131.3"	"165.0"	""	"835"	"29"	"36.000"	"29.000"	"0.0528027425069206"	"14"	"0"	"0.0002101"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGYPDTVLR"	"[K].aLGYPDTVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.38733"	"1333.76738"	"1333.76772"	"-0.25"	"-0.00017"	"13/74"	"13"	"74"	"1019909.86437988"	"HCD"	"MS2"	"7.216862"	"54.1"	"100.000"	"84.6684"	"29410"	"29410"	"29393"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"77.8"	""	"78.9"	""	"80.6"	"0.1"	"95.5"	"104.3"	""	"932"	"37"	"36.000"	"29.000"	"0.00842143142721092"	"15"	"0.0001991"	"0.003751"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGYPDTVLR"	"[K].aLGYPDTVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"667.38739"	"1333.76750"	"1333.76772"	"-0.16"	"-0.00011"	"16/74"	"16"	"74"	"4171858.24572754"	"HCD"	"MS2"	"2.831758"	"172.7"	"100.000"	"84.3207"	"29242"	"29242"	"29225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.9"	""	"236.9"	""	"260.7"	""	"263.7"	""	"309.3"	"318.2"	""	"932"	"45"	"36.000"	"29.000"	"0.00151839902666936"	"18"	"0"	"4.804E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGYPDTVLR"	"[K].aLGYPDTVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"667.38745"	"1333.76763"	"1333.76772"	"-0.07"	"-0.00005"	"13/74"	"13"	"74"	"4181480.61322021"	"HCD"	"MS2"	"2.231898"	"169.5"	"100.000"	"84.3547"	"29284"	"29284"	"29267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.0"	""	"245.8"	""	"255.0"	""	"230.5"	"0.7"	"294.7"	"316.4"	""	"931"	"38"	"36.000"	"29.000"	"0.0076545503715655"	"20"	"0"	"8.278E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGYPDTVLR"	"[K].aLGYPDTVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"667.38751"	"1333.76775"	"1333.76772"	"0.02"	"0.00002"	"13/74"	"13"	"74"	"1314784.12084961"	"HCD"	"MS2"	"4.558402"	"62.5"	"100.000"	"84.6230"	"29364"	"29364"	"29347"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.3"	""	"88.6"	""	"95.5"	""	"93.0"	""	"113.8"	"110.0"	""	"931"	"39"	"36.000"	"29.000"	"0.00564832509891447"	"21"	"0.001261"	"0.009917"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGYPDTVLR"	"[K].aLGYPDTVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"667.38824"	"1333.76921"	"1333.76772"	"1.12"	"0.00075"	"7/74"	"7"	"74"	"1946632.19891357"	"HCD"	"MS2"	"15.43116"	"105.6"	"100.000"	"84.0206"	"29119"	"29119"	"29101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.4"	""	"136.2"	""	"144.6"	""	"149.6"	""	"196.3"	"237.5"	""	"901"	"30"	"36.000"	"29.000"	"0.0408032536704639"	"21"	"0"	"5.937E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTDDGNK"	"[K].lLTDDGNk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"667.38849"	"1333.76970"	"1333.77275"	"-2.29"	"-0.00153"	"6/62"	"6"	"62"	"1003300.1305542"	"HCD"	"MS2"	"25.10069"	"97.5"	"100.000"	"55.7216"	"17680"	"17680"	"17667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.6"	""	"123.9"	""	"127.4"	""	"154.5"	""	"190.2"	"192.0"	""	"889"	"16"	"36.000"	"29.000"	"1.15046064078555"	"18"	"0.001951"	"0.01638"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGYPDTVLR"	"[K].aLGYPDTVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"667.38867"	"1333.77007"	"1333.76772"	"1.76"	"0.00118"	"7/74"	"7"	"74"	"2115423.22827148"	"HCD"	"MS2"	"15.15159"	"115.4"	"100.000"	"84.0475"	"29159"	"29159"	"29140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.3"	""	"151.7"	""	"161.5"	""	"163.4"	""	"228.2"	"243.4"	""	"883"	"30"	"36.000"	"29.000"	"0.0478553732540361"	"22"	"0"	"8.112E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"667.38904"	"1333.77080"	"1333.77275"	"-1.46"	"-0.00098"	"7/74"	"7"	"74"	"889032.639465332"	"HCD"	"MS2"	"4.346673"	"82.1"	"100.000"	"40.3378"	"11399"	"11399"	"11373"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.3"	""	"93.9"	""	"97.0"	""	"137.5"	"2.3"	"165.0"	"185.3"	""	"883"	"44"	"36.000"	"29.000"	"0.00170974250232894"	""	"9.9E-05"	"0.0006447"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"667.38916"	"1333.77104"	"1333.77275"	"-1.28"	"-0.00085"	"7/74"	"7"	"74"	"957222.238708496"	"HCD"	"MS2"	"5.8272"	"82.8"	"100.000"	"40.2374"	"11392"	"11392"	"11370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.7"	""	"88.4"	""	"96.6"	""	"133.3"	""	"171.2"	"203.1"	""	"881"	"42"	"36.000"	"29.000"	"0.00254065627124286"	""	"9.9E-05"	"0.0006937"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"667.38940"	"1333.77153"	"1333.77275"	"-0.91"	"-0.00061"	"14/74"	"14"	"74"	"883895.091552734"	"HCD"	"MS2"	"0"	"74.2"	"100.000"	"39.7107"	"11145"	"11145"	"11126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.9"	""	"79.2"	""	"75.9"	""	"140.8"	"2.1"	"153.1"	"160.5"	""	"874"	"48"	"36.000"	"29.000"	"0.000687830511771738"	""	"9.9E-05"	"0.0004674"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"1"	"667.38947"	"1333.77165"	"1333.77275"	"-0.82"	"-0.00055"	"6/66"	"6"	"66"	"1778411.72576904"	"HCD"	"MS2"	"0"	"142.4"	"100.000"	"33.4901"	"8624"	"8624"	"8604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.6"	""	"113.9"	""	"136.3"	""	"254.0"	""	"318.4"	"336.8"	""	"874"	"34"	"36.000"	"29.000"	"0.0176799664671782"	""	"0.001615"	"0.01468"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTDDGNK"	"[K].lLTDDGNk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"667.38959"	"1333.77190"	"1333.77275"	"-0.64"	"-0.00043"	"6/62"	"6"	"62"	"572474.992370605"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"56.0309"	"17803"	"17803"	"17787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.0"	""	"81.6"	""	"84.3"	""	"89.1"	""	"120.6"	"111.6"	""	"874"	"31"	"36.000"	"29.000"	"0.0366844014108977"	"29"	"0.0001991"	"0.003136"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"667.38965"	"1333.77202"	"1333.77275"	"-0.55"	"-0.00037"	"6/64"	"6"	"64"	"1811176.65704346"	"HCD"	"MS2"	"0"	"140.3"	"100.000"	"35.7134"	"9524"	"9524"	"9504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.9"	""	"126.3"	""	"143.3"	""	"285.6"	""	"298.8"	"288.2"	""	"874"	"32"	"36.000"	"29.000"	"0.0248016992563535"	""	"0.001488"	"0.01204"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3235"	"0.0000"	"1"	"1"	"1"	"667.38965"	"1333.77202"	"1333.77275"	"-0.55"	"-0.00037"	"6/66"	"6"	"66"	"2174663.77398682"	"HCD"	"MS2"	"2.302233"	"166.3"	"100.000"	"33.3631"	"8610"	"8610"	"8592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.3"	""	"130.4"	""	"164.3"	""	"305.7"	""	"386.9"	"381.8"	""	"874"	"34"	"36.000"	"29.000"	"0.0172377841006897"	""	"0.001453"	"0.01163"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"667.38977"	"1333.77226"	"1333.77275"	"-0.37"	"-0.00024"	"14/74"	"14"	"74"	"683403.524902344"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"39.6013"	"11135"	"11135"	"11117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.0"	""	"70.2"	""	"67.5"	""	"107.7"	"1.3"	"120.4"	"124.1"	""	"874"	"46"	"36.000"	"29.000"	"0.00113888910134952"	""	"0"	"0.0001994"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5306"	"0.0000"	"1"	"1"	"1"	"667.38977"	"1333.77226"	"1333.77275"	"-0.37"	"-0.00024"	"14/74"	"14"	"74"	"2688801.84588623"	"HCD"	"MS2"	"8.249173"	"204.8"	"100.000"	"40.0023"	"11262"	"11262"	"11244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.3"	""	"222.9"	""	"228.3"	""	"378.3"	"2.9"	"416.4"	"462.3"	""	"874"	"49"	"36.000"	"29.000"	"0.000551418632616123"	""	"0.0001686"	"0.001283"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQETQK"	"[K].iEQETQk.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"667.38983"	"1333.77239"	"1333.77275"	"-0.27"	"-0.00018"	"12/62"	"12"	"62"	"442178.161254883"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"36.3053"	"9800"	"9800"	"9791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.9"	""	"38.6"	""	"46.0"	""	"73.1"	""	"87.1"	"100.6"	""	"875"	"20"	"36.000"	"29.000"	"0.43249197891241"	""	"0.002035"	"0.01786"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3143"	"0.0000"	"1"	"1"	"1"	"667.38995"	"1333.77263"	"1333.77275"	"-0.09"	"-0.00006"	"6/66"	"6"	"66"	"3214514.73736572"	"HCD"	"MS2"	"6.274594"	"257.4"	"100.000"	"33.1912"	"8503"	"8503"	"8482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"367.7"	""	"229.6"	""	"242.2"	""	"498.0"	""	"555.7"	"557.6"	""	"856"	"35"	"36.000"	"29.000"	"0.0125153721771695"	""	"0.001488"	"0.01283"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"667.39008"	"1333.77287"	"1333.77275"	"0.09"	"0.00006"	"12/64"	"12"	"64"	"1314169.043396"	"HCD"	"MS2"	"0"	"111.3"	"100.000"	"35.5712"	"9503"	"9503"	"9490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.7"	""	"102.6"	""	"122.7"	""	"219.9"	""	"234.6"	"228.4"	""	"856"	"38"	"36.000"	"29.000"	"0.00675217623431322"	""	"0.001049"	"0.008828"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEEQTK"	"[K].qIEEQTk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"667.39014"	"1333.77300"	"1333.77275"	"0.18"	"0.00012"	"6/66"	"6"	"66"	"2371530.2020874"	"HCD"	"MS2"	"0"	"196.5"	"100.000"	"33.0621"	"8488"	"8488"	"8462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"290.2"	""	"177.4"	""	"177.8"	""	"386.3"	""	"423.6"	"412.3"	""	"856"	"35"	"36.000"	"29.000"	"0.012486587619925"	""	"0.001453"	"0.01164"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEAQAEK"	"[K].sLEAQAEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"667.39020"	"1333.77312"	"1333.77275"	"0.28"	"0.00018"	"14/74"	"14"	"74"	"2864095.57403564"	"HCD"	"MS2"	"8.779157"	"219.0"	"100.000"	"39.9089"	"11258"	"11258"	"11241"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.8"	""	"227.7"	""	"251.1"	""	"385.4"	""	"453.4"	"518.2"	""	"856"	"47"	"36.000"	"29.000"	"0.000871854009258049"	""	"0.0001686"	"0.001174"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLETEK"	"[R].qQLETEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"667.39050"	"1333.77373"	"1333.77275"	"0.73"	"0.00049"	"6/64"	"6"	"64"	"346851.318786621"	"HCD"	"MS2"	"14.7885"	"30.5"	"100.000"	"35.8858"	"9632"	"9632"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.5"	""	"28.0"	""	"33.4"	""	"53.2"	""	"61.0"	"65.2"	""	"845"	"22"	"36.000"	"29.000"	"0.243123373524949"	"23"	"0.002628"	"0.02771"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLTDDGNK"	"[K].lLTDDGNk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"667.39056"	"1333.77385"	"1333.77275"	"0.82"	"0.00055"	"7/62"	"7"	"62"	"1614813.23864746"	"HCD"	"MS2"	"39.55696"	"135.8"	"100.000"	"56.0715"	"17788"	"17788"	"17768"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.8"	""	"172.0"	""	"171.9"	""	"217.0"	""	"260.7"	"257.4"	""	"845"	"35"	"36.000"	"29.000"	"0.0137983359092812"	"29"	"0.0001686"	"0.001453"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEPLFK"	"[K].iqEPLFk.[Q]"	"N-Term(TMT6plex); Q2(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q80W83"	"Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r5b PE=2 SV=1"	"Q80W83"	"Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r5b PE=2 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"667.41034"	"1333.81340"	"1333.81316"	"0.18"	"0.00012"	"7/58"	"7"	"58"	"383480.626098633"	"HCD"	"MS2"	"34.31272"	"32.1"	"100.000"	"97.9780"	"34777"	"34777"	"34757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"44.9"	""	"48.0"	""	"38.7"	""	"64.4"	"55.7"	""	"693"	"24"	"35.000"	"28.000"	"0.13418477396534"	"19"	"0.001951"	"0.0165"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEPLFK"	"[K].iqEPLFk.[Q]"	"N-Term(TMT6plex); Q2(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q80W83"	"Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r5b PE=2 SV=1"	"Q80W83"	"Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2r5b PE=2 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"667.41107"	"1333.81487"	"1333.81316"	"1.28"	"0.00085"	"10/58"	"10"	"58"	"381835.828918457"	"HCD"	"MS2"	"53.61252"	"31.0"	"100.000"	"97.9129"	"34720"	"34720"	"34691"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"40.9"	""	"46.7"	""	"44.8"	""	"67.2"	"63.4"	""	"683"	"24"	"35.000"	"28.000"	"0.129536067368512"	"19"	"0.0001991"	"0.004197"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFEADPER"	"[R].eLFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"667.84363"	"1334.67998"	"1334.67896"	"0.76"	"0.00051"	"5/78"	"5"	"78"	"801649.504882813"	"HCD"	"MS2"	"7.690016"	"40.6"	"100.000"	"65.3264"	"21576"	"21576"	"21552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.8"	""	"53.3"	""	"51.2"	""	"63.3"	""	"74.8"	"72.9"	""	"671"	"35"	"35.000"	"28.000"	"0.0110329722158892"	"25"	"9.9E-05"	"0.001009"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"667.86285"	"1334.71843"	"1334.71872"	"-0.22"	"-0.00014"	"10/84"	"10"	"84"	"409866.591430664"	"HCD"	"MS2"	"44.22441"	"16.8"	"100.000"	"99.0031"	"35189"	"35189"	"35170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"18.0"	""	"22.4"	""	"35.0"	""	"33.2"	"35.3"	""	"893"	"37"	"36.000"	"29.000"	"0.00854715270521914"	"22"	"0.0001991"	"0.002999"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"667.86316"	"1334.71904"	"1334.71872"	"0.24"	"0.00016"	"10/84"	"10"	"84"	"863803.408813477"	"HCD"	"MS2"	"6.005421"	"23.4"	"100.000"	"99.2424"	"35256"	"35256"	"35241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"22.4"	""	"26.3"	""	"59.1"	""	"50.4"	"45.8"	""	"895"	"43"	"36.000"	"29.000"	"0.00240875727676039"	"25"	"0.0001686"	"0.001587"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGGLDVLQMK"	"[M].sGGLDVLQmk.[E]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"P38983"	"40S ribosomal protein SA OS=Rattus norvegicus OX=10116 GN=Rpsa PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"667.86322"	"1334.71916"	"1334.71872"	"0.33"	"0.00022"	"6/84"	"6"	"84"	"820965.204467773"	"HCD"	"MS2"	"3.252409"	"23.4"	"100.000"	"99.2919"	"35305"	"35305"	"35292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"21.8"	""	"20.6"	""	"61.9"	""	"44.2"	"58.3"	""	"894"	"43"	"36.000"	"29.000"	"0.00225064772128194"	"27"	"0.0001991"	"0.002207"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETIEQEK"	"[K].eTIEQEk.[QR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329; P63312"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2; Thymosin beta-10 OS=Rattus norvegicus OX=10116 GN=Tmsb10 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"667.87799"	"1334.74870"	"1334.75677"	"-6.04"	"-0.00403"	"12/62"	"12"	"62"	"1067774.21447754"	"HCD"	"MS2"	"0"	"88.2"	"100.000"	"36.8972"	"10002"	"10002"	"9977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.5"	""	"88.2"	""	"109.9"	""	"134.5"	""	"180.3"	"176.3"	""	"948"	"33"	"36.000"	"29.000"	"0.0249332184269195"	""	"0.002286"	"0.02166"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETIEQEK"	"[K].eTIEQEk.[QR]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329; P63312"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2; Thymosin beta-10 OS=Rattus norvegicus OX=10116 GN=Tmsb10 PE=1 SV=2"	"0"	"2"	"2"	"0.4412"	"0.0000"	"1"	"1"	"1"	"667.88104"	"1334.75481"	"1334.75677"	"-1.47"	"-0.00098"	"12/62"	"12"	"62"	"1718884.56115723"	"HCD"	"MS2"	"10.60892"	"129.1"	"100.000"	"36.8563"	"10023"	"10023"	"9995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.3"	""	"136.2"	""	"155.5"	""	"203.1"	""	"265.6"	"254.7"	""	"938"	"34"	"36.000"	"29.000"	"0.0195062076321696"	""	"0.001348"	"0.01102"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPEEVK"	"[K].sSTPEEVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"667.88116"	"1334.75505"	"1334.75677"	"-1.28"	"-0.00086"	"7/66"	"7"	"66"	"2623933.76489258"	"HCD"	"MS2"	"0"	"192.9"	"100.000"	"32.7960"	"8342"	"8342"	"8313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"286.3"	""	"221.3"	""	"207.1"	""	"362.8"	""	"378.7"	"377.4"	""	"934"	"43"	"36.000"	"29.000"	"0.00214939819862493"	"25"	"0.005507"	"0.06944"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSTPEEVK"	"[K].sSTPEEVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"667.88171"	"1334.75615"	"1334.75677"	"-0.46"	"-0.00031"	"7/66"	"7"	"66"	"3567866.59057617"	"HCD"	"MS2"	"0"	"239.2"	"100.000"	"32.7362"	"8355"	"8355"	"8331"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"377.9"	""	"254.0"	""	"267.0"	""	"448.9"	""	"460.5"	"460.5"	""	"926"	"45"	"36.000"	"29.000"	"0.0014209571806251"	"28"	"0.006958"	"0.08719"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEIANVQYR"	"[R].lEIANVQYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P27274"	"CD59 glycoprotein OS=Rattus norvegicus OX=10116 GN=Cd59 PE=1 SV=2"	"P27274"	"CD59 glycoprotein OS=Rattus norvegicus OX=10116 GN=Cd59 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.88525"	"1334.76323"	"1334.76297"	"0.20"	"0.00013"	"11/72"	"11"	"72"	"2030001.33666992"	"HCD"	"MS2"	"41.60434"	"100.8"	"100.000"	"80.6397"	"27781"	"27781"	"27764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.6"	""	"124.3"	""	"129.0"	""	"188.1"	""	"197.8"	"209.7"	""	"863"	"2"	"36.000"	"29.000"	"25.8214603268528"	"13"	"0.001615"	"0.01471"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATTSNPSK"	"[R].aATTSNPSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"667.88690"	"1334.76653"	"1334.76800"	"-1.10"	"-0.00074"	"16/80"	"16"	"80"	"769022.680419922"	"HCD"	"MS2"	"0"	"63.2"	"100.000"	"24.5116"	"5037"	"5037"	"5010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.7"	""	"95.4"	""	"130.9"	""	"44.7"	"2.1"	"45.4"	"101.4"	""	"878"	"66"	"36.000"	"29.000"	"1.20632553321195E-05"	"27"	"0"	"2.83E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATTSNPSK"	"[R].aATTSNPSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"P50463"	"Cysteine and glycine-rich protein 3 OS=Rattus norvegicus OX=10116 GN=Csrp3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"667.88721"	"1334.76714"	"1334.76800"	"-0.65"	"-0.00043"	"12/80"	"12"	"80"	"568626.664367676"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"24.3734"	"5018"	"5018"	"4994"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.7"	""	"99.4"	""	"96.6"	""	"29.6"	""	"37.0"	"60.7"	""	"875"	"25"	"36.000"	"29.000"	"0.152047070631402"	"19"	"0.0001991"	"0.001987"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTTTPEVK"	"[K].tTTTPEVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"667.89935"	"1334.79143"	"1334.79315"	"-1.29"	"-0.00086"	"6/66"	"6"	"66"	"462796.124755859"	"HCD"	"MS2"	"22.48016"	"50.8"	"100.000"	"37.5289"	"10260"	"10260"	"10233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"36.8"	""	"55.4"	""	"88.0"	""	"109.2"	"136.0"	""	"818"	"28"	"36.000"	"29.000"	"0.072731627870592"	"20"	"0.002673"	"0.02814"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAESVLK"	"[K].eTAESVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"667.89978"	"1334.79228"	"1334.79315"	"-0.65"	"-0.00043"	"14/64"	"14"	"64"	"1896445.27783203"	"HCD"	"MS2"	"16.97475"	"146.9"	"100.000"	"53.1409"	"16629"	"16629"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.5"	""	"153.0"	""	"188.5"	""	"255.3"	"0.4"	"298.0"	"300.2"	""	"809"	"49"	"36.000"	"29.000"	"0.00050456663151127"	"29"	"0"	"0.0003198"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEETVK"	"[K].aVTEETVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"667.89978"	"1334.79228"	"1334.79315"	"-0.65"	"-0.00043"	"14/62"	"14"	"62"	"3460420.91296387"	"HCD"	"MS2"	"13.16079"	"248.7"	"100.000"	"41.6566"	"11964"	"11964"	"11939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"375.6"	""	"362.0"	""	"370.0"	""	"366.5"	""	"424.0"	"460.9"	""	"809"	"47"	"36.000"	"29.000"	"0.000777890604344159"	"23"	"0.0001686"	"0.001284"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTEETVK"	"[K].aVTEETVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"667.89996"	"1334.79265"	"1334.79315"	"-0.38"	"-0.00025"	"14/62"	"14"	"62"	"3239887.56317139"	"HCD"	"MS2"	"16.96232"	"225.1"	"100.000"	"41.7840"	"11982"	"11982"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"365.7"	""	"302.4"	""	"325.3"	""	"342.9"	""	"403.7"	"391.8"	""	"809"	"49"	"36.000"	"29.000"	"0.00047524606097304"	"24"	"0.0001686"	"0.001067"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAESVLK"	"[K].eTAESVLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"667.90015"	"1334.79302"	"1334.79315"	"-0.10"	"-0.00007"	"7/64"	"7"	"64"	"1749551.39746094"	"HCD"	"MS2"	"9.503254"	"136.3"	"100.000"	"53.4396"	"16717"	"16717"	"16698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.2"	""	"158.8"	""	"157.8"	""	"238.9"	"4.0"	"277.9"	"276.8"	""	"782"	"48"	"35.000"	"28.000"	"0.000685767276220128"	""	"9.9E-05"	"0.0006287"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLNEMK"	"[K].dQLNEMk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"668.37054"	"1335.73381"	"1335.73426"	"-0.33"	"-0.00022"	"7/66"	"7"	"66"	"712683.809082031"	"HCD"	"MS2"	"37.26163"	"66.4"	"100.000"	"48.5001"	"14746"	"14746"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.2"	""	"65.0"	""	"69.3"	""	"128.6"	"1.4"	"135.4"	"146.1"	""	"970"	"25"	"36.000"	"29.000"	"0.144458046827316"	"28"	"0.002035"	"0.01779"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLNEMK"	"[K].dQLNEMk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"668.37054"	"1335.73381"	"1335.73426"	"-0.33"	"-0.00022"	"7/66"	"7"	"66"	"710427.810302734"	"HCD"	"MS2"	"57.00481"	"64.5"	"100.000"	"48.8395"	"14848"	"14848"	"14819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.0"	""	"58.9"	""	"70.6"	""	"122.0"	""	"141.3"	"150.0"	""	"970"	"25"	"36.000"	"29.000"	"0.165478562136635"	"27"	"0.001872"	"0.01547"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAEQMAK"	"[R].aEAEQMAk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"Q9Z1E1"	"Flotillin-1 OS=Rattus norvegicus OX=10116 GN=Flot1 PE=2 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"668.37073"	"1335.73418"	"1335.73426"	"-0.06"	"-0.00004"	"7/66"	"7"	"66"	"1201250.45288086"	"HCD"	"MS2"	"24.79698"	"111.9"	"100.000"	"37.2124"	"10168"	"10168"	"10147"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.1"	""	"111.4"	""	"124.3"	""	"176.9"	""	"272.2"	"282.8"	""	"962"	"19"	"36.000"	"29.000"	"0.668567215613623"	"14"	"0.0001991"	"0.004034"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIFQETAR"	"[K].eLIFQETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"668.37653"	"1335.74578"	"1335.74698"	"-0.90"	"-0.00060"	"6/84"	"6"	"84"	"509706.231933594"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"76.9479"	"26258"	"26258"	"26243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"39.5"	""	"34.5"	""	"45.8"	""	"65.0"	"56.1"	""	"934"	"29"	"36.000"	"29.000"	"0.0602999400777521"	"25"	"0.0001686"	"0.001065"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].sEIDLFNIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"668.37671"	"1335.74614"	"1335.74698"	"-0.63"	"-0.00042"	"6/74"	"6"	"74"	"323950.55090332"	"HCD"	"MS2"	"43.54337"	"18.8"	"100.000"	"109.0054"	"39127"	"39127"	"39115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.2"	""	"19.6"	""	"32.5"	""	"35.7"	""	"33.3"	"33.7"	""	"936"	"39"	"36.000"	"29.000"	"0.00638624907923617"	"23"	"9.9E-05"	"0.0008492"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIFQETAR"	"[K].eLIFQETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"668.37720"	"1335.74712"	"1335.74698"	"0.10"	"0.00007"	"7/84"	"7"	"84"	"1745805.80303955"	"HCD"	"MS2"	"7.434426"	"94.9"	"100.000"	"76.6570"	"26140"	"26140"	"26120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.9"	""	"112.4"	""	"128.5"	""	"166.1"	"1.3"	"193.9"	"187.7"	""	"929"	"44"	"36.000"	"29.000"	"0.00194529610997273"	"24"	"0"	"0.0002749"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIFQETAR"	"[K].eLIFQETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"668.37738"	"1335.74748"	"1335.74698"	"0.38"	"0.00025"	"7/84"	"7"	"84"	"1510610.14044189"	"HCD"	"MS2"	"0"	"84.5"	"100.000"	"76.7844"	"26223"	"26223"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.5"	""	"94.6"	""	"100.1"	""	"149.8"	""	"171.5"	"182.6"	""	"924"	"41"	"36.000"	"29.000"	"0.00329338099918452"	"23"	"0"	"0.0003421"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].sEIDLFNIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"668.37805"	"1335.74883"	"1335.74698"	"1.38"	"0.00092"	"7/74"	"7"	"74"	"13570891.5309448"	"HCD"	"MS2"	"0.2177343"	"410.4"	"70.176"	"109.2660"	"39222"	"39222"	"39217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"586.6"	""	"488.0"	""	"611.8"	""	"728.2"	""	"705.0"	"768.9"	""	"907"	"55"	"36.000"	"29.000"	"0.000145069893224505"	""	"9.9E-05"	"0.0005905"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].sEIDLFNIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"668.37811"	"1335.74895"	"1335.74698"	"1.47"	"0.00098"	"8/74"	"8"	"74"	"409025.284912109"	"HCD"	"MS2"	"36.23677"	"22.8"	"100.000"	"109.2886"	"39246"	"39246"	"39237"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.3"	""	"25.5"	""	"35.2"	""	"35.3"	"2.5"	"45.9"	"40.9"	""	"908"	"27"	"36.000"	"29.000"	"0.0959524024085838"	"23"	"0"	"0.0001811"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLFNIR"	"[R].sEIDLFNIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"668.37842"	"1335.74956"	"1335.74698"	"1.93"	"0.00129"	"7/74"	"7"	"74"	"14428730.5632324"	"HCD"	"MS2"	"0.1737386"	"492.7"	"77.094"	"109.5628"	"39348"	"39348"	"39337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"705.4"	""	"616.5"	""	"721.3"	""	"848.7"	"0.1"	"834.3"	"938.8"	""	"902"	"47"	"36.000"	"29.000"	"0.000986680492401248"	""	"9.9E-05"	"0.0005919"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQSDAK"	"[K].iSEQSDAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"668.37915"	"1335.75102"	"1335.75202"	"-0.74"	"-0.00050"	"7/72"	"7"	"72"	"3406405.87683105"	"HCD"	"MS2"	"10.24458"	"259.5"	"100.000"	"33.4757"	"8656"	"8656"	"8633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"408.2"	""	"304.8"	""	"315.7"	""	"446.5"	""	"498.3"	"487.7"	""	"897"	"45"	"36.000"	"29.000"	"0.00145466318381183"	"21"	"9.9E-05"	"0.0008263"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQSDAK"	"[K].iSEQSDAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"668.37933"	"1335.75139"	"1335.75202"	"-0.47"	"-0.00031"	"7/72"	"7"	"72"	"3877350.91210938"	"HCD"	"MS2"	"0"	"288.6"	"100.000"	"33.6138"	"8675"	"8675"	"8652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"446.7"	""	"350.5"	""	"350.3"	""	"489.7"	""	"553.3"	"546.8"	""	"897"	"43"	"36.000"	"29.000"	"0.00214665596406703"	"21"	"0.0001686"	"0.001089"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"668.40131"	"1335.79534"	"1335.79580"	"-0.34"	"-0.00023"	"12/50"	"12"	"50"	"2616475.26708984"	"HCD"	"MS2"	"4.054883"	"148.7"	"100.000"	"74.3382"	"25200"	"25200"	"25187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.1"	""	"128.0"	""	"116.0"	""	"574.9"	""	"276.2"	"196.0"	""	"702"	"21"	"35.000"	"28.000"	"0.302905470266207"	"25"	"0.00714"	"0.09121"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"668.40161"	"1335.79595"	"1335.79580"	"0.11"	"0.00008"	"6/50"	"6"	"50"	"2737833.76049805"	"HCD"	"MS2"	"0"	"156.9"	"100.000"	"74.4220"	"25263"	"25263"	"25246"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.8"	""	"144.4"	""	"130.4"	""	"587.9"	""	"283.6"	"225.8"	""	"690"	"23"	"35.000"	"28.000"	"0.177345059795937"	"20"	"0.004234"	"0.04837"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"668.40179"	"1335.79631"	"1335.79580"	"0.39"	"0.00026"	"6/50"	"6"	"50"	"1117395.39367676"	"HCD"	"MS2"	"8.4575"	"73.3"	"100.000"	"73.3853"	"24841"	"24841"	"24819"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.7"	""	"87.4"	""	"66.6"	""	"212.0"	"0.1"	"139.0"	"113.9"	""	"676"	"23"	"35.000"	"28.000"	"0.162149905639201"	"22"	"0.005426"	"0.06929"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"668.40186"	"1335.79643"	"1335.79580"	"0.48"	"0.00032"	"6/50"	"6"	"50"	"922888.947570801"	"HCD"	"MS2"	"22.77787"	"62.9"	"100.000"	"73.8751"	"25011"	"25011"	"24993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.7"	""	"67.5"	""	"50.9"	""	"183.7"	""	"120.1"	"111.2"	""	"676"	"17"	"35.000"	"28.000"	"0.675953311935867"	"20"	"0.004792"	"0.05679"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"668.40198"	"1335.79668"	"1335.79580"	"0.66"	"0.00044"	"12/50"	"12"	"50"	"2715740.40997314"	"HCD"	"MS2"	"4.624433"	"156.7"	"100.000"	"73.6825"	"24962"	"24962"	"24944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.3"	""	"135.4"	""	"131.6"	""	"549.2"	""	"295.4"	"243.1"	""	"676"	"21"	"35.000"	"28.000"	"0.296426277546548"	"22"	"0.0065"	"0.08085"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVEEILK"	"[K].mVEEILk.[Y]"	"N-Term(TMT6plex); M1(Oxidation); K7(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"668.40210"	"1335.79692"	"1335.79580"	"0.84"	"0.00056"	"6/50"	"6"	"50"	"2708879.66143799"	"HCD"	"MS2"	"2.919037"	"159.5"	"100.000"	"73.5801"	"24891"	"24891"	"24873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.9"	""	"151.6"	""	"118.4"	""	"591.6"	""	"300.4"	"223.1"	""	"676"	"22"	"35.000"	"28.000"	"0.193159779195091"	"26"	"0.00511"	"0.06457"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILMSALEEE"	"[K].gILmSALEEE.[-]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"668.84668"	"1336.68608"	"1336.68675"	"-0.50"	"-0.00033"	"6/84"	"6"	"84"	"148503.530029297"	"HCD"	"MS2"	"40.01884"	"5.9"	"100.000"	"107.3926"	"38545"	"38545"	"38529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"8.9"	""	"7.5"	""	"14.1"	""	"9.7"	"9.3"	""	"760"	"26"	"35.000"	"28.000"	"0.0876563931713626"	"23"	"0.0008247"	"0.007601"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILMSALEEE"	"[K].gILmSALEEE.[-]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"Q91XU8"	"Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Cds2 PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"668.84760"	"1336.68791"	"1336.68675"	"0.87"	"0.00058"	"5/84"	"5"	"84"	"116798.024658203"	"HCD"	"MS2"	"28.35493"	"5.2"	"100.000"	"107.0652"	"38398"	"38398"	"38382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"4.4"	""	"5.3"	""	"8.4"	""	"10.5"	"14.4"	""	"747"	"14"	"35.000"	"28.000"	"1.34676123168584"	"25"	"0.00329"	"0.03579"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"668.85175"	"1336.69621"	"1336.69798"	"-1.32"	"-0.00088"	"7/76"	"7"	"76"	"316006.29473877"	"HCD"	"MS2"	"26.30655"	"18.4"	"100.000"	"93.9277"	"33140"	"33140"	"33110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.5"	""	"23.7"	""	"24.5"	""	"31.5"	""	"35.9"	"38.7"	""	"768"	"19"	"35.000"	"28.000"	"0.4318483100033"	"15"	"0.003401"	"0.03824"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"668.85205"	"1336.69682"	"1336.69798"	"-0.87"	"-0.00058"	"8/76"	"8"	"76"	"1785303.31561279"	"HCD"	"MS2"	"60.35611"	"98.7"	"100.000"	"80.6883"	"27801"	"27801"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.0"	""	"118.7"	""	"129.6"	""	"188.5"	""	"196.3"	"202.3"	""	"774"	"13"	"35.000"	"28.000"	"1.91298235863905"	"15"	"0.005589"	"0.07048"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"668.85223"	"1336.69719"	"1336.69798"	"-0.59"	"-0.00040"	"6/76"	"6"	"76"	"303331.769042969"	"HCD"	"MS2"	"34.17423"	"21.9"	"100.000"	"94.7839"	"33452"	"33452"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.9"	""	"26.9"	""	"28.8"	""	"34.3"	""	"45.0"	"46.9"	""	"763"	"40"	"35.000"	"28.000"	"0.00413518117699089"	"18"	"0.001872"	"0.01544"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85242"	"1336.69756"	"1336.69798"	"-0.32"	"-0.00021"	"5/76"	"5"	"76"	"346772.646911621"	"HCD"	"MS2"	"39.98986"	"20.1"	"100.000"	"91.9238"	"32298"	"32298"	"32271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"26.8"	""	"24.8"	""	"32.3"	""	"42.0"	"38.1"	""	"764"	"2"	"35.000"	"28.000"	"24.2696415967366"	"13"	"0.007989"	"0.1011"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85260"	"1336.69792"	"1336.69798"	"-0.04"	"-0.00003"	"6/76"	"6"	"76"	"425709.658996582"	"HCD"	"MS2"	"51.00974"	"24.9"	"100.000"	"91.2337"	"32017"	"32017"	"31994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.8"	""	"40.4"	""	"34.6"	""	"35.1"	""	"50.6"	"44.1"	""	"766"	"8"	"35.000"	"28.000"	"6.00065659851421"	"13"	"0.006845"	"0.08595"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"668.85260"	"1336.69792"	"1336.69798"	"-0.04"	"-0.00003"	"7/76"	"7"	"76"	"1074729.50976563"	"HCD"	"MS2"	"14.00892"	"52.9"	"100.000"	"80.9788"	"27919"	"27919"	"27900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"65.6"	""	"65.1"	""	"116.8"	"0.5"	"98.2"	"98.0"	""	"766"	"31"	"35.000"	"28.000"	"0.032225433925011"	"15"	"0.0009352"	"0.008045"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.85266"	"1336.69805"	"1336.69798"	"0.05"	"0.00003"	"6/76"	"6"	"76"	"321048.874328613"	"HCD"	"MS2"	"22.53068"	"19.7"	"100.000"	"93.9028"	"33094"	"33094"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"26.2"	""	"32.0"	""	"27.7"	"1.2"	"32.4"	"34.5"	""	"766"	"11"	"35.000"	"28.000"	"3.1564489804998"	"13"	"0.002834"	"0.03017"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"668.85272"	"1336.69817"	"1336.69798"	"0.14"	"0.00009"	"5/76"	"5"	"76"	"1123972.99163818"	"HCD"	"MS2"	"19.35607"	"57.3"	"100.000"	"81.1036"	"27942"	"27942"	"27923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.8"	""	"63.6"	""	"70.2"	""	"117.0"	""	"116.8"	"110.9"	""	"766"	"28"	"35.000"	"28.000"	"0.0554879619907644"	"16"	"0.00307"	"0.03362"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"668.85284"	"1336.69841"	"1336.69798"	"0.32"	"0.00021"	"5/76"	"5"	"76"	"1098097.20471191"	"HCD"	"MS2"	"26.91539"	"56.4"	"100.000"	"80.7944"	"27817"	"27817"	"27798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.6"	""	"61.7"	""	"67.5"	""	"110.8"	""	"117.9"	"109.7"	""	"761"	"30"	"35.000"	"28.000"	"0.0362538940410999"	"15"	"0.0009352"	"0.007901"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELDMLDIR"	"[R].sELDmLDIR.[E]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"668.85315"	"1336.69902"	"1336.69798"	"0.78"	"0.00052"	"5/76"	"5"	"76"	"329604.315795898"	"HCD"	"MS2"	"48.63794"	"22.9"	"100.000"	"91.9231"	"32333"	"32333"	"32310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"35.5"	""	"30.5"	""	"34.0"	""	"46.9"	"43.5"	""	"759"	"17"	"35.000"	"28.000"	"0.687403565149139"	"15"	"0.002328"	"0.02199"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAQLFATDER"	"[R].gAQLFATDER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"668.85632"	"1336.70537"	"1336.70585"	"-0.36"	"-0.00024"	"8/90"	"8"	"90"	"2085193.10003662"	"HCD"	"MS2"	"37.48609"	"124.3"	"100.000"	"54.5647"	"17210"	"17210"	"17188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.4"	""	"162.2"	""	"152.1"	""	"246.2"	"0.3"	"226.8"	"215.3"	""	"772"	"35"	"35.000"	"28.000"	"0.0120389137946026"	"22"	"0"	"4.463E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAQLFATDER"	"[R].gAQLFATDER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"Q9WVS2"	"Probable tRNA N6-adenosine threonylcarbamoyltransferase OS=Rattus norvegicus OX=10116 GN=Osgep PE=2 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"668.85693"	"1336.70659"	"1336.70585"	"0.56"	"0.00037"	"8/90"	"8"	"90"	"2154516.4564209"	"HCD"	"MS2"	"48.20066"	"131.8"	"100.000"	"54.8981"	"17312"	"17312"	"17287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.2"	""	"153.2"	""	"142.1"	""	"285.8"	""	"251.6"	"239.8"	""	"767"	"35"	"35.000"	"28.000"	"0.0131754473019602"	"22"	"0"	"5.231E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86871"	"1336.73015"	"1336.73100"	"-0.63"	"-0.00042"	"6/76"	"6"	"76"	"883824.416320801"	"HCD"	"MS2"	"41.72281"	"60.7"	"100.000"	"82.6749"	"28575"	"28575"	"28555"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.8"	""	"70.4"	""	"81.8"	""	"103.7"	""	"124.9"	"120.7"	""	"856"	"33"	"36.000"	"29.000"	"0.0202508738835514"	"24"	"0.0001991"	"0.003037"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86871"	"1336.73015"	"1336.73100"	"-0.63"	"-0.00042"	"6/84"	"6"	"84"	"883824.416320801"	"HCD"	"MS2"	"41.72281"	"60.7"	"100.000"	"82.6749"	"28575"	"28575"	"28555"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.8"	""	"70.4"	""	"81.8"	""	"103.7"	""	"124.9"	"120.7"	""	"856"	"33"	"36.000"	"29.000"	"0.0202508738835514"	"24"	"0.0001991"	"0.003037"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86890"	"1336.73052"	"1336.73100"	"-0.36"	"-0.00024"	"7/76"	"7"	"76"	"816921.600952148"	"HCD"	"MS2"	"3.737933"	"52.5"	"100.000"	"82.9694"	"28694"	"28694"	"28677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.8"	""	"60.9"	""	"74.5"	""	"93.0"	""	"102.6"	"102.0"	""	"856"	"40"	"36.000"	"29.000"	"0.00469292667949284"	"24"	"0"	"0.0003684"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86890"	"1336.73052"	"1336.73100"	"-0.36"	"-0.00024"	"7/84"	"7"	"84"	"816921.600952148"	"HCD"	"MS2"	"3.737933"	"52.5"	"100.000"	"82.9694"	"28694"	"28694"	"28677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.8"	""	"60.9"	""	"74.5"	""	"93.0"	""	"102.6"	"102.0"	""	"856"	"40"	"36.000"	"29.000"	"0.00469292667949284"	"24"	"0"	"0.0003684"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86896"	"1336.73064"	"1336.73100"	"-0.27"	"-0.00018"	"12/76"	"12"	"76"	"818866.420837402"	"HCD"	"MS2"	"6.294119"	"52.2"	"100.000"	"83.0053"	"28737"	"28737"	"28720"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.7"	""	"66.8"	""	"83.6"	""	"76.5"	""	"105.8"	"101.6"	""	"856"	"37"	"36.000"	"29.000"	"0.00850048624628955"	"24"	"0"	"0.0002122"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86896"	"1336.73064"	"1336.73100"	"-0.27"	"-0.00018"	"12/84"	"12"	"84"	"818866.420837402"	"HCD"	"MS2"	"6.294119"	"52.2"	"100.000"	"83.0053"	"28737"	"28737"	"28720"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.7"	""	"66.8"	""	"83.6"	""	"76.5"	""	"105.8"	"101.6"	""	"856"	"37"	"36.000"	"29.000"	"0.00850048624628955"	"24"	"0"	"0.0002122"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"ELIFEETAR"	"[K].eLIFEETAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"668.86945"	"1336.73161"	"1336.73100"	"0.46"	"0.00031"	"7/76"	"7"	"76"	"960908.449035645"	"HCD"	"MS2"	"48.98545"	"65.8"	"100.000"	"82.7133"	"28619"	"28619"	"28601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.6"	""	"73.4"	""	"82.0"	""	"105.7"	""	"139.6"	"147.6"	""	"866"	"45"	"36.000"	"29.000"	"0.00129565058765135"	"24"	"0"	"0.0001504"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ELIFQETAR"	"[K].eLIFqETAR.[F]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"668.86945"	"1336.73161"	"1336.73100"	"0.46"	"0.00031"	"7/84"	"7"	"84"	"960908.449035645"	"HCD"	"MS2"	"48.98545"	"65.8"	"100.000"	"82.7133"	"28619"	"28619"	"28601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.6"	""	"73.4"	""	"82.0"	""	"105.7"	""	"139.6"	"147.6"	""	"866"	"45"	"36.000"	"29.000"	"0.00129565058765135"	"24"	"0"	"0.0001504"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGVSPDK"	"[R].eFGVSPDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"668.87708"	"1336.74687"	"1336.75129"	"-3.30"	"-0.00221"	"6/68"	"6"	"68"	"2225287.48376465"	"HCD"	"MS2"	"0"	"173.2"	"100.000"	"59.0214"	"19018"	"19018"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.6"	""	"213.1"	""	"208.7"	""	"307.3"	""	"349.2"	"334.2"	""	"883"	"35"	"36.000"	"29.000"	"0.0137698975137747"	"29"	"0.0001991"	"0.004603"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGVSPDK"	"[R].eFGVSPDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"668.87762"	"1336.74797"	"1336.75129"	"-2.48"	"-0.00166"	"6/68"	"6"	"68"	"2506549.82220459"	"HCD"	"MS2"	"0"	"205.2"	"100.000"	"59.2448"	"19074"	"19074"	"19054"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"273.8"	""	"246.2"	""	"269.1"	""	"360.6"	""	"388.1"	"410.9"	""	"874"	"33"	"36.000"	"29.000"	"0.0214526741878687"	"24"	"0.0001991"	"0.003091"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVYEK"	"[R].eNPVYEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"668.87872"	"1336.75017"	"1336.75129"	"-0.84"	"-0.00056"	"6/68"	"6"	"68"	"5396022.67449951"	"HCD"	"MS2"	"0"	"396.8"	"100.000"	"43.6652"	"12784"	"12784"	"12762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"625.3"	""	"460.7"	""	"490.4"	""	"639.1"	""	"762.1"	"787.0"	""	"849"	"32"	"36.000"	"29.000"	"0.0290320494270967"	""	"0.002588"	"0.02676"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENPVYEK"	"[R].eNPVYEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"668.87909"	"1336.75090"	"1336.75129"	"-0.29"	"-0.00019"	"6/68"	"6"	"68"	"5383087.48266602"	"HCD"	"MS2"	"0"	"382.5"	"100.000"	"43.9958"	"12883"	"12883"	"12865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"628.2"	""	"446.0"	""	"490.6"	""	"582.0"	""	"706.7"	"772.8"	""	"863"	"31"	"36.000"	"29.000"	"0.036139388523775"	"28"	"0.002588"	"0.02633"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLEQTNPR"	"[R].hLLEQTNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"446.25577"	"1336.75275"	"1336.75346"	"-0.53"	"-0.00024"	"5/76"	"5"	"76"	"7183318.53607178"	"HCD"	"MS2"	"19.12238"	"302.2"	"100.000"	"28.4294"	"6585"	"6585"	"6565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"390.3"	""	"413.6"	""	"477.1"	""	"419.5"	"2.1"	"593.8"	"568.7"	""	"913"	"21"	"36.000"	"29.000"	"0.33299735343121"	"16"	"0.0001991"	"0.005037"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLEQTNPR"	"[R].hLLEQTNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.88007"	"1336.75286"	"1336.75346"	"-0.46"	"-0.00030"	"5/76"	"5"	"76"	"211195.386413574"	"HCD"	"MS2"	"100"	"14.0"	"100.000"	"28.1781"	"6528"	"6528"	"6500"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"17.6"	""	"12.8"	""	"23.4"	""	"32.1"	"21.8"	""	"910"	"11"	"36.000"	"29.000"	"3.58931353516442"	"13"	"0.004959"	"0.06295"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLSADDK"	"[-].mVLSADDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"668.88013"	"1336.75298"	"1336.75466"	"-1.26"	"-0.00084"	"6/62"	"6"	"62"	"475885.988952637"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"64.1061"	"21080"	"21080"	"21056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"47.2"	""	"49.8"	""	"63.1"	"0.8"	"99.9"	"96.4"	""	"909"	"12"	"36.000"	"29.000"	"2.70105786090778"	"23"	"0.002588"	"0.02676"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQLIDMK"	"[R].dQLIDmk.[R]"	"N-Term(TMT6plex); M6(Oxidation); K7(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"668.88043"	"1336.75359"	"1336.75466"	"-0.80"	"-0.00054"	"8/66"	"8"	"66"	"263937.475646973"	"HCD"	"MS2"	"25.4512"	"23.7"	"100.000"	"66.7672"	"22158"	"22158"	"22141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"32.7"	""	"31.0"	""	"40.0"	""	"48.7"	"38.4"	""	"909"	"22"	"36.000"	"29.000"	"0.270728444233935"	"29"	"0.007601"	"0.09715"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLLEQTNPR"	"[R].hLLEQTNPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"446.25613"	"1336.75385"	"1336.75346"	"0.29"	"0.00013"	"7/76"	"7"	"76"	"6416949.59466553"	"HCD"	"MS2"	"21.71332"	"293.0"	"100.000"	"28.2401"	"6553"	"6553"	"6529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"377.2"	""	"410.1"	""	"452.5"	""	"423.3"	""	"552.6"	"562.0"	""	"907"	"16"	"36.000"	"29.000"	"1.26059996692884"	"20"	"0.002588"	"0.02721"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLSADDK"	"[-].mVLSADDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"668.88080"	"1336.75432"	"1336.75466"	"-0.25"	"-0.00017"	"5/62"	"5"	"62"	"379290.064880371"	"HCD"	"MS2"	"28.5995"	"37.4"	"100.000"	"64.1235"	"21054"	"21054"	"21043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"36.3"	""	"33.6"	""	"64.4"	""	"93.2"	"86.4"	""	"912"	"10"	"36.000"	"29.000"	"4.13966161761252"	"18"	"0.009514"	"0.1268"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLSADDK"	"[-].mVLSADDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"668.88104"	"1336.75481"	"1336.75466"	"0.11"	"0.00007"	"10/62"	"10"	"62"	"604772.484741211"	"HCD"	"MS2"	"0"	"50.0"	"100.000"	"64.4066"	"21201"	"21201"	"21179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.2"	""	"42.8"	""	"50.2"	""	"84.3"	""	"129.8"	"120.5"	""	"900"	"21"	"36.000"	"29.000"	"0.399220205417082"	""	"0.002462"	"0.02308"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVLSADDK"	"[-].mVLSADDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"668.88129"	"1336.75530"	"1336.75466"	"0.48"	"0.00032"	"7/62"	"7"	"62"	"585442.992553711"	"HCD"	"MS2"	"0"	"51.3"	"100.000"	"64.4447"	"21183"	"21183"	"21168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"51.3"	""	"50.0"	""	"90.4"	""	"130.0"	"118.0"	""	"901"	"28"	"36.000"	"29.000"	"0.0715640310243299"	"22"	"0.0001686"	"0.001457"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVTESSK"	"[K].dIVTESSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"668.88916"	"1336.77104"	"1336.77242"	"-1.03"	"-0.00069"	"12/68"	"12"	"68"	"1101917.20959473"	"HCD"	"MS2"	"0"	"94.0"	"100.000"	"44.8197"	"13219"	"13219"	"13195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.5"	""	"104.0"	""	"128.2"	""	"166.9"	""	"183.1"	"179.1"	""	"806"	"42"	"36.000"	"29.000"	"0.00253690991691451"	"28"	"9.9E-05"	"0.000843"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVTESSK"	"[K].dIVTESSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"668.88989"	"1336.77251"	"1336.77242"	"0.07"	"0.00005"	"12/68"	"12"	"68"	"1193395.7857666"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"44.6458"	"13182"	"13182"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.0"	""	"111.2"	""	"152.4"	""	"171.8"	""	"185.9"	"186.9"	""	"801"	"38"	"36.000"	"29.000"	"0.0063038013721872"	"26"	"0.0001686"	"0.001178"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVASSSQK"	"[R].aTVASSSQk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.89502"	"1336.78276"	"1336.78365"	"-0.66"	"-0.00044"	"7/76"	"7"	"76"	"252446.870361328"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"27.2819"	"6128"	"6128"	"6113"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"21.8"	""	"23.6"	""	"46.7"	""	"44.3"	"38.9"	""	"749"	"8"	"35.000"	"28.000"	"6.34529506267525"	"13"	"0.008792"	"0.112"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDSYVVK"	"[K].aPDSYVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"668.89612"	"1336.78496"	"1336.78767"	"-2.03"	"-0.00136"	"6/58"	"6"	"58"	"2079989.4921875"	"HCD"	"MS2"	"28.05044"	"160.2"	"100.000"	"58.3858"	"18724"	"18724"	"18702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.2"	""	"191.4"	""	"194.9"	""	"284.4"	"0.5"	"320.5"	"314.8"	""	"747"	"30"	"35.000"	"28.000"	"0.0416189008296512"	""	"0.0001991"	"0.002263"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDSYVVK"	"[K].aPDSYVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"668.89624"	"1336.78520"	"1336.78767"	"-1.85"	"-0.00123"	"6/58"	"6"	"58"	"1957155.15777588"	"HCD"	"MS2"	"0"	"152.1"	"100.000"	"58.0703"	"18631"	"18631"	"18606"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.6"	""	"194.9"	""	"171.3"	""	"277.8"	""	"286.5"	"299.7"	""	"733"	"33"	"35.000"	"28.000"	"0.019636947497864"	""	"0.00296"	"0.03155"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEENFLK"	"[R].vEENFLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"668.89685"	"1336.78642"	"1336.78767"	"-0.93"	"-0.00062"	"6/56"	"6"	"56"	"749445.733215332"	"HCD"	"MS2"	"6.415874"	"68.1"	"100.000"	"82.5121"	"28509"	"28509"	"28492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"84.3"	""	"84.7"	""	"116.5"	""	"143.5"	"145.2"	""	"727"	"28"	"35.000"	"28.000"	"0.063753556241948"	""	"0.001615"	"0.01451"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APDSYVVK"	"[K].aPDSYVVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"668.89685"	"1336.78642"	"1336.78767"	"-0.93"	"-0.00062"	"6/58"	"6"	"58"	"1704026.13812256"	"HCD"	"MS2"	"12.00375"	"148.8"	"100.000"	"58.3742"	"18755"	"18755"	"18731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.4"	""	"161.5"	""	"189.8"	""	"264.5"	"0.4"	"320.0"	"288.4"	""	"727"	"30"	"35.000"	"28.000"	"0.0394915714184803"	"20"	"0.000264"	"0.00603"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEENFLK"	"[R].vEENFLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"0"	"2"	"2"	"0.5517"	"0.0000"	"1"	"1"	"1"	"668.89728"	"1336.78728"	"1336.78767"	"-0.29"	"-0.00020"	"6/56"	"6"	"56"	"782565.741271973"	"HCD"	"MS2"	"19.8957"	"64.3"	"100.000"	"82.6065"	"28576"	"28576"	"28553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"79.8"	""	"82.9"	""	"111.7"	"0.3"	"134.3"	"137.4"	""	"733"	"29"	"35.000"	"28.000"	"0.0486490068757949"	"28"	"0.001316"	"0.01046"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEENFLK"	"[R].vEENFLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"668.89764"	"1336.78801"	"1336.78767"	"0.25"	"0.00017"	"6/56"	"6"	"56"	"529331.791259766"	"HCD"	"MS2"	"9.54805"	"46.2"	"100.000"	"82.2935"	"28453"	"28453"	"28428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.0"	""	"48.2"	""	"58.2"	""	"79.6"	""	"104.5"	"93.7"	""	"711"	"29"	"35.000"	"28.000"	"0.0457972715626909"	""	"0.001217"	"0.009452"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEENFLK"	"[R].vEENFLk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"Q5U2X6"	"Coiled-coil domain-containing protein 47 OS=Rattus norvegicus OX=10116 GN=Ccdc47 PE=2 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"668.89844"	"1336.78960"	"1336.78767"	"1.44"	"0.00096"	"6/56"	"6"	"56"	"444467.997436523"	"HCD"	"MS2"	"13.04191"	"40.9"	"100.000"	"82.2153"	"28393"	"28393"	"28368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.6"	""	"47.3"	""	"57.3"	""	"69.3"	"1.0"	"83.6"	"84.4"	""	"702"	"29"	"35.000"	"28.000"	"0.0465915454663139"	""	"0.001261"	"0.009725"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APFDLFENR"	"[R].aPFDLFENR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.35645"	"1337.70561"	"1337.70512"	"0.37"	"0.00025"	"5/72"	"5"	"72"	"591884.585449219"	"HCD"	"MS2"	"30.95688"	"27.9"	"100.000"	"109.8279"	"39439"	"39439"	"39418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.7"	""	"36.1"	""	"40.1"	""	"49.5"	"0.6"	"51.0"	"48.0"	""	"714"	"12"	"35.000"	"28.000"	"2.1314159731043"	"13"	"0.005082"	"0.06419"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGSDAWK"	"[R].eSGSDAWk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"669.35876"	"1337.71025"	"1337.71015"	"0.08"	"0.00005"	"12/64"	"12"	"64"	"2607380.20452881"	"HCD"	"MS2"	"28.698"	"247.3"	"100.000"	"44.1728"	"12956"	"12956"	"12929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"423.1"	""	"313.8"	""	"325.2"	""	"372.5"	""	"438.0"	"468.9"	""	"697"	"34"	"35.000"	"28.000"	"0.0135270402547741"	""	"0.0001686"	"0.001943"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESGSDAWK"	"[R].eSGSDAWk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"669.35889"	"1337.71050"	"1337.71015"	"0.26"	"0.00017"	"6/64"	"6"	"64"	"2781927.16400146"	"HCD"	"MS2"	"31.31645"	"249.5"	"100.000"	"43.9783"	"12912"	"12912"	"12890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"440.9"	""	"321.5"	""	"336.3"	""	"369.7"	""	"432.5"	"463.7"	""	"693"	"30"	"35.000"	"28.000"	"0.0312394399180464"	""	"0.0001991"	"0.003609"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMQPTHPIR"	"[K].eMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"3"	"3"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"669.36530"	"1337.72331"	"1337.71972"	"2.69"	"0.00180"	"5/84"	"5"	"84"	"543901.378601074"	"HCD"	"MS2"	"0"	"38.7"	"100.000"	"25.7338"	"5525"	"5525"	"5501"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"54.2"	""	"48.4"	""	"63.5"	""	"77.0"	"68.4"	""	"788"	"17"	"35.000"	"28.000"	"0.795236347290536"	""	"0.009382"	"0.1222"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGDETGAK"	"[K].tTGDETGAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"669.36853"	"1337.72978"	"1337.73128"	"-1.12"	"-0.00075"	"8/74"	"8"	"74"	"882706.329528809"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"25.4288"	"5402"	"5402"	"5387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.1"	""	"92.7"	""	"110.3"	""	"128.2"	""	"151.1"	"111.7"	""	"833"	"36"	"36.000"	"29.000"	"0.00941054998297037"	"25"	"0"	"0.0001766"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTGDETGAK"	"[K].tTGDETGAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"669.36963"	"1337.73198"	"1337.73128"	"0.52"	"0.00035"	"7/74"	"7"	"74"	"1299542.46136475"	"HCD"	"MS2"	"0"	"114.1"	"100.000"	"25.2839"	"5382"	"5382"	"5368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.3"	""	"137.4"	""	"151.8"	""	"211.5"	"0.5"	"222.6"	"171.1"	""	"816"	"45"	"36.000"	"29.000"	"0.00144763862807299"	"26"	"0"	"0.0001052"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].emLQQSk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"3"	"669.37830"	"1337.74932"	"1337.74991"	"-0.44"	"-0.00030"	"6/64"	"6"	"64"	"1742536.95239258"	"HCD"	"MS2"	"0"	"105.4"	"100.000"	"31.6322"	"7910"	"7910"	"7888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.2"	""	"106.6"	""	"135.3"	""	"200.3"	""	"187.5"	"167.3"	""	"860"	"18"	"36.000"	"29.000"	"0.764660146316737"	"15"	"0.008601"	"0.1098"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].emLQQSk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"3"	"669.37848"	"1337.74968"	"1337.74991"	"-0.17"	"-0.00011"	"9/64"	"9"	"64"	"2345580.04266357"	"HCD"	"MS2"	"6.959211"	"134.0"	"100.000"	"31.7793"	"7933"	"7933"	"7905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"228.0"	""	"151.8"	""	"180.3"	""	"270.6"	"0.4"	"219.3"	"216.9"	""	"862"	"17"	"36.000"	"29.000"	"0.778892048310709"	"14"	"0.004852"	"0.05988"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLQQSK"	"[R].emLQQSk.[I]"	"N-Term(TMT6plex); M2(Oxidation); K7(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"669.37866"	"1337.75005"	"1337.74991"	"0.10"	"0.00007"	"6/64"	"6"	"64"	"1982467.7053833"	"HCD"	"MS2"	"0"	"114.8"	"100.000"	"31.4469"	"7798"	"7798"	"7770"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.4"	""	"115.3"	""	"126.0"	""	"284.6"	""	"207.4"	"196.5"	""	"857"	"17"	"36.000"	"29.000"	"0.907717746453982"	"14"	"0.005956"	"0.07288"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].SLSQNYGVLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"669.38525"	"1337.76323"	"1337.76263"	"0.45"	"0.00030"	"6/88"	"6"	"88"	"1312600.7244873"	"HCD"	"MS2"	"22.21339"	"99.7"	"100.000"	"57.9139"	"18567"	"18567"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.3"	""	"123.2"	""	"120.2"	""	"182.4"	""	"195.3"	"189.8"	""	"851"	"33"	"36.000"	"29.000"	"0.0196743124605385"	""	"0.003904"	"0.04226"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSQNYGVLK"	"[K].SLSQNYGVLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.3243"	"0.0000"	"1"	"1"	"1"	"669.38684"	"1337.76641"	"1337.76263"	"2.82"	"0.00189"	"6/88"	"6"	"88"	"1123504.73693848"	"HCD"	"MS2"	"21.58491"	"81.6"	"100.000"	"58.1719"	"18637"	"18637"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.5"	""	"104.9"	""	"100.8"	""	"148.5"	""	"162.2"	"149.4"	""	"806"	"37"	"36.000"	"29.000"	"0.00776792540015948"	""	"0.005426"	"0.06896"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPEAQAK"	"[R].vHPEAQAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"446.60245"	"1337.79279"	"1337.79416"	"-1.02"	"-0.00046"	"9/60"	"9"	"60"	"12063489.2557373"	"HCD"	"MS2"	"13.07967"	"515.8"	"100.000"	"24.1220"	"4877"	"4877"	"4855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"673.1"	""	"541.1"	""	"650.4"	""	"928.1"	""	"1087.2"	"1025.9"	""	"583"	"31"	"34.000"	"27.000"	"0.022732047721753"	"23"	"0.0001686"	"0.001243"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPEAQAK"	"[R].vHPEAQAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"446.60260"	"1337.79325"	"1337.79416"	"-0.68"	"-0.00030"	"5/60"	"5"	"60"	"10462561.3786621"	"HCD"	"MS2"	"12.42652"	"421.0"	"100.000"	"24.0593"	"4889"	"4889"	"4866"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"547.1"	""	"445.2"	""	"513.1"	""	"786.5"	""	"852.3"	"854.2"	""	"583"	"26"	"34.000"	"27.000"	"0.0737290365964052"	"20"	"0.0001686"	"0.001339"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPEAQAK"	"[R].vHPEAQAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"669.40051"	"1337.79375"	"1337.79416"	"-0.30"	"-0.00020"	"7/60"	"7"	"60"	"742052.677124023"	"HCD"	"MS2"	"0"	"47.0"	"100.000"	"24.0730"	"4895"	"4895"	"4866"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.6"	""	"45.7"	""	"56.2"	""	"87.2"	""	"88.8"	"103.9"	""	"573"	"33"	"34.000"	"27.000"	"0.013967691241462"	"18"	"0.00212"	"0.01946"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHPEAQAK"	"[R].vHPEAQAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"669.40051"	"1337.79375"	"1337.79416"	"-0.30"	"-0.00020"	"7/60"	"7"	"60"	"895865.58782959"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"24.1426"	"4886"	"4886"	"4855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.6"	""	"49.4"	""	"63.1"	""	"102.2"	"0.9"	"99.8"	"101.2"	""	"573"	"37"	"34.000"	"27.000"	"0.00632593356009915"	"19"	"0"	"0.0003529"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDEIVK"	"[K].yLDEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"669.40778"	"1337.80828"	"1337.80807"	"0.15"	"0.00010"	"6/50"	"6"	"50"	"547368.365478516"	"HCD"	"MS2"	"47.72431"	"45.3"	"100.000"	"95.9277"	"33916"	"33916"	"33897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.4"	""	"56.7"	""	"63.4"	""	"66.4"	"1.4"	"87.1"	"92.9"	""	"484"	"28"	"33.000"	"26.000"	"0.0373951574368296"	""	"0.0001991"	"0.003109"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDEIVK"	"[K].yLDEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"669.40820"	"1337.80913"	"1337.80807"	"0.79"	"0.00053"	"6/50"	"6"	"50"	"513710.841491699"	"HCD"	"MS2"	"30.39082"	"41.8"	"100.000"	"95.9389"	"33953"	"33953"	"33933"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.5"	""	"53.9"	""	"62.8"	""	"71.3"	"0.0"	"70.6"	"90.7"	""	"488"	"31"	"33.000"	"26.000"	"0.0209599299247316"	""	"0.0001991"	"0.004168"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAmk.[Y]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"669.87048"	"1338.73369"	"1338.73392"	"-0.17"	"-0.00012"	"6/62"	"6"	"62"	"2531000.52276611"	"HCD"	"MS2"	"0"	"163.2"	"100.000"	"43.6724"	"12752"	"12752"	"12732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.2"	""	"161.8"	""	"168.1"	""	"414.8"	"2.8"	"315.3"	"322.7"	""	"861"	"33"	"36.000"	"29.000"	"0.0214769771851535"	"26"	"0.0001991"	"0.004681"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDADAMK"	"[R].lTDADAmk.[Y]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"669.87061"	"1338.73393"	"1338.73392"	"0.01"	"0.00001"	"6/62"	"6"	"62"	"2426971.06988525"	"HCD"	"MS2"	"0"	"167.7"	"100.000"	"43.5388"	"12732"	"12732"	"12714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.0"	""	"175.1"	""	"202.7"	""	"395.7"	"4.2"	"328.5"	"308.8"	""	"856"	"33"	"36.000"	"29.000"	"0.0228793545821904"	"24"	"0.001951"	"0.01716"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSmTk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"669.87537"	"1338.74346"	"1338.74516"	"-1.27"	"-0.00085"	"8/76"	"8"	"76"	"1090491.82598877"	"HCD"	"MS2"	"100"	"74.6"	"100.000"	"26.6952"	"5938"	"5938"	"5927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.4"	""	"118.4"	""	"127.0"	""	"178.7"	""	"109.5"	"78.8"	""	"872"	"31"	"36.000"	"29.000"	"0.0334569609361753"	"16"	"0.0001991"	"0.002198"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSmTk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"669.87543"	"1338.74358"	"1338.74516"	"-1.18"	"-0.00079"	"8/76"	"8"	"76"	"668754.516296387"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"27.2062"	"6098"	"6098"	"6084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.6"	""	"58.3"	""	"72.2"	""	"111.0"	""	"84.4"	"62.5"	""	"899"	"41"	"36.000"	"29.000"	"0.00378207116169515"	"19"	"9.9E-05"	"0.0007099"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSmTk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"669.87555"	"1338.74382"	"1338.74516"	"-1.00"	"-0.00067"	"8/76"	"8"	"76"	"625087.075500488"	"HCD"	"MS2"	"14.67486"	"44.3"	"100.000"	"26.9852"	"6047"	"6047"	"6034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"63.5"	""	"76.6"	""	"106.8"	""	"71.2"	"50.2"	""	"899"	"35"	"36.000"	"29.000"	"0.0151261950434283"	"20"	"0.0001686"	"0.001094"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAGVGSMTK"	"[R].gGAGVGSmTk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"669.87567"	"1338.74407"	"1338.74516"	"-0.81"	"-0.00055"	"8/76"	"8"	"76"	"1511191.49291992"	"HCD"	"MS2"	"0"	"92.1"	"100.000"	"26.9130"	"5984"	"5984"	"5977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.6"	""	"138.0"	""	"162.0"	""	"237.0"	""	"136.7"	"81.0"	""	"899"	"46"	"36.000"	"29.000"	"0.00125814210317565"	"22"	"0.0001991"	"0.002257"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.87640"	"1338.74553"	"1338.74665"	"-0.83"	"-0.00056"	"7/78"	"7"	"78"	"340325.56072998"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"78.9027"	"27048"	"27048"	"27024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.9"	""	"33.6"	""	"29.6"	""	"35.7"	""	"42.5"	"44.4"	""	"885"	"53"	"36.000"	"29.000"	"0.000221775350880068"	"16"	"0"	"0.0002409"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"669.87665"	"1338.74602"	"1338.74665"	"-0.47"	"-0.00031"	"6/78"	"6"	"78"	"1915313.07794189"	"HCD"	"MS2"	"0"	"92.8"	"100.000"	"78.6005"	"26952"	"26952"	"26935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.8"	""	"142.0"	""	"143.9"	""	"126.0"	"0.3"	"162.3"	"153.7"	""	"883"	"41"	"36.000"	"29.000"	"0.00319102868290358"	"20"	"0"	"0.000273"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"669.87677"	"1338.74626"	"1338.74665"	"-0.29"	"-0.00019"	"6/78"	"6"	"78"	"850783.066589355"	"HCD"	"MS2"	"2.473658"	"47.2"	"100.000"	"78.9003"	"27074"	"27074"	"27062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.3"	""	"66.0"	""	"77.4"	""	"61.3"	""	"91.9"	"82.6"	""	"883"	"44"	"36.000"	"29.000"	"0.00169406748884841"	"23"	"0"	"4.132E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"669.87689"	"1338.74651"	"1338.74665"	"-0.10"	"-0.00007"	"6/78"	"6"	"78"	"2025516.57513428"	"HCD"	"MS2"	"0"	"99.1"	"100.000"	"78.5845"	"26918"	"26918"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.7"	""	"148.4"	""	"152.3"	""	"130.9"	""	"185.1"	"166.2"	""	"894"	"48"	"36.000"	"29.000"	"0.000783984584323267"	"21"	"0"	"8.031E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLETVYLER"	"[R].sLETVYLER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"Q5HZV9"	"Protein phosphatase 1 regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Ppp1r7 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"669.87714"	"1338.74700"	"1338.74665"	"0.26"	"0.00017"	"13/78"	"13"	"78"	"654764.792419434"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"78.2918"	"26799"	"26799"	"26774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.2"	""	"60.0"	""	"57.0"	""	"51.2"	"0.0"	"71.4"	"65.4"	""	"879"	"43"	"36.000"	"29.000"	"0.00222822416286732"	"20"	"0"	"7.898E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEAGSEFK"	"[R].iEAGSEFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88764"	"Death-associated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Dapk3 PE=1 SV=1"	"O88764"	"Death-associated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Dapk3 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"669.88519"	"1338.76311"	"1338.76694"	"-2.86"	"-0.00191"	"6/64"	"6"	"64"	"578361.610717773"	"HCD"	"MS2"	"40.01921"	"59.6"	"100.000"	"63.7716"	"20945"	"20945"	"20921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.5"	""	"76.0"	""	"80.0"	""	"81.8"	"1.7"	"119.0"	"108.1"	""	"765"	"29"	"35.000"	"28.000"	"0.0518359950224271"	"21"	"9.9E-05"	"0.0008698"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEAGSEFK"	"[R].iEAGSEFk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O88764"	"Death-associated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Dapk3 PE=1 SV=1"	"O88764"	"Death-associated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Dapk3 PE=1 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"669.88629"	"1338.76531"	"1338.76694"	"-1.22"	"-0.00082"	"5/64"	"5"	"64"	"549868.818725586"	"HCD"	"MS2"	"0"	"55.4"	"100.000"	"63.8714"	"20953"	"20953"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.4"	""	"69.0"	""	"75.6"	""	"97.8"	"0.1"	"99.8"	"96.9"	""	"727"	"26"	"35.000"	"28.000"	"0.0910970713477173"	"21"	"9.9E-05"	"0.0009803"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSQEEIK"	"[R].fSQEEIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"669.88666"	"1338.76604"	"1338.76694"	"-0.67"	"-0.00045"	"6/62"	"6"	"62"	"1338014.39154053"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"59.5022"	"19179"	"19179"	"19157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.3"	""	"41.1"	""	"41.3"	""	"41.7"	""	"58.3"	"938.6"	""	"723"	"30"	"35.000"	"28.000"	"0.0390938373394205"	""	"0.001348"	"0.0109"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSQEEIK"	"[R].fSQEEIk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"P04466"	"Myosin regulatory light chain 2, skeletal muscle isoform OS=Rattus norvegicus OX=10116 GN=Mylpf PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"669.88666"	"1338.76604"	"1338.76694"	"-0.67"	"-0.00045"	"6/62"	"6"	"62"	"1431607.02667236"	"HCD"	"MS2"	"3.255083"	"130.2"	"100.000"	"59.4168"	"19179"	"19179"	"19161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"29.0"	""	"28.5"	""	"37.3"	""	"47.5"	"1080.4"	""	"723"	"30"	"35.000"	"28.000"	"0.0351648121395373"	""	"0.001951"	"0.01666"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPYSSK"	"[K].eLGPYSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"669.88666"	"1338.76604"	"1338.76694"	"-0.67"	"-0.00045"	"7/68"	"7"	"68"	"6696981.70050049"	"HCD"	"MS2"	"14.1687"	"472.0"	"100.000"	"52.3605"	"16311"	"16311"	"16294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"755.0"	""	"702.6"	""	"674.2"	""	"652.4"	""	"826.5"	"860.7"	""	"723"	"34"	"35.000"	"28.000"	"0.0135240977660347"	"24"	"0.0001991"	"0.005406"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPYSSK"	"[K].eLGPYSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"669.88678"	"1338.76628"	"1338.76694"	"-0.49"	"-0.00033"	"7/68"	"7"	"68"	"6577675.17584229"	"HCD"	"MS2"	"15.43369"	"455.5"	"100.000"	"52.6665"	"16402"	"16402"	"16385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"752.7"	""	"680.9"	""	"654.5"	""	"644.5"	""	"779.6"	"799.3"	""	"723"	"32"	"35.000"	"28.000"	"0.023994311995029"	"26"	"0.0001991"	"0.0054"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"669.88684"	"1338.76641"	"1338.76694"	"-0.40"	"-0.00027"	"7/64"	"7"	"64"	"1049883.8081665"	"HCD"	"MS2"	"26.17485"	"83.8"	"100.000"	"86.4719"	"30105"	"30105"	"30092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.6"	""	"83.2"	""	"85.3"	""	"197.7"	"1.2"	"195.1"	"158.1"	""	"723"	"17"	"35.000"	"28.000"	"0.753543454239671"	"23"	"0.0001991"	"0.002736"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"669.88696"	"1338.76665"	"1338.76694"	"-0.22"	"-0.00014"	"12/64"	"12"	"64"	"2350835.48638916"	"HCD"	"MS2"	"9.184062"	"188.0"	"100.000"	"86.2042"	"30031"	"30031"	"30020"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.4"	""	"198.3"	""	"174.0"	""	"405.4"	""	"473.3"	"352.7"	""	"723"	"35"	"35.000"	"28.000"	"0.012534537143859"	"25"	"0.0001686"	"0.001088"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFDETLAK"	"[K].gFDETLAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"669.88702"	"1338.76677"	"1338.76694"	"-0.12"	"-0.00008"	"6/60"	"6"	"60"	"388851.911437988"	"HCD"	"MS2"	"26.00348"	"35.7"	"100.000"	"71.5409"	"24065"	"24065"	"24037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.7"	""	"37.1"	""	"43.2"	""	"69.4"	""	"76.6"	"67.1"	""	"725"	"25"	"35.000"	"28.000"	"0.121145702009466"	"21"	"0.0001686"	"0.001387"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPYSSK"	"[K].eLGPYSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"669.88715"	"1338.76702"	"1338.76694"	"0.06"	"0.00004"	"7/68"	"7"	"68"	"3175187.10101318"	"HCD"	"MS2"	"8.458784"	"233.6"	"100.000"	"52.6755"	"16439"	"16439"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"338.8"	""	"313.2"	""	"308.0"	""	"322.4"	""	"471.0"	"466.4"	""	"698"	"31"	"35.000"	"28.000"	"0.0251087693323291"	"26"	"0.0001991"	"0.004966"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"669.88721"	"1338.76714"	"1338.76694"	"0.15"	"0.00010"	"6/64"	"6"	"64"	"802599.874511719"	"HCD"	"MS2"	"35.2707"	"60.9"	"100.000"	"86.4922"	"30145"	"30145"	"30135"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"62.4"	""	"65.2"	""	"144.9"	""	"133.5"	"121.1"	""	"698"	"16"	"35.000"	"28.000"	"0.941511061923277"	"21"	"0.0001991"	"0.002883"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"669.88721"	"1338.76714"	"1338.76694"	"0.15"	"0.00010"	"5/64"	"5"	"64"	"2240427.98754883"	"HCD"	"MS2"	"7.944317"	"185.6"	"100.000"	"86.1932"	"29995"	"29995"	"29981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.3"	""	"195.8"	""	"166.3"	""	"429.9"	""	"448.3"	"345.3"	""	"698"	"32"	"35.000"	"28.000"	"0.022429801334364"	"25"	"0.0001686"	"0.001559"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGPYSSK"	"[K].eLGPYSSk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"669.88727"	"1338.76726"	"1338.76694"	"0.24"	"0.00016"	"7/68"	"7"	"68"	"3248184.12872314"	"HCD"	"MS2"	"8.532064"	"251.2"	"100.000"	"52.9700"	"16525"	"16525"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"361.3"	""	"367.8"	""	"359.8"	""	"341.4"	""	"475.2"	"476.9"	""	"698"	"32"	"35.000"	"28.000"	"0.0223782142228221"	"26"	"0.0001991"	"0.002811"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"669.88739"	"1338.76750"	"1338.76694"	"0.42"	"0.00028"	"5/64"	"5"	"64"	"683595.433898926"	"HCD"	"MS2"	"9.537209"	"65.4"	"100.000"	"85.9066"	"29910"	"29910"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"83.3"	""	"61.3"	""	"130.3"	""	"150.2"	"126.0"	""	"714"	"32"	"35.000"	"28.000"	"0.0237502516764022"	"24"	"0.0001686"	"0.001354"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGSVDFK"	"[R].lDGSVDFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"669.88757"	"1338.76787"	"1338.76694"	"0.70"	"0.00047"	"12/64"	"12"	"64"	"646008.590820313"	"HCD"	"MS2"	"9.369061"	"62.5"	"100.000"	"85.9211"	"29886"	"29886"	"29870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.6"	""	"78.0"	""	"59.9"	""	"140.9"	"1.1"	"145.2"	"111.8"	""	"714"	"36"	"35.000"	"28.000"	"0.0090921840017286"	"25"	"0"	"0.0003732"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTPDITGYR"	"[R].sTTPDITGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"670.35614"	"1339.70500"	"1339.70551"	"-0.38"	"-0.00025"	"7/84"	"7"	"84"	"1161240.65380859"	"HCD"	"MS2"	"11.15382"	"71.5"	"100.000"	"47.7266"	"14432"	"14432"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.9"	""	"102.7"	""	"91.2"	""	"105.7"	""	"133.0"	"137.3"	""	"670"	"36"	"35.000"	"28.000"	"0.00758655843043674"	"19"	"0.0001991"	"0.002763"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STTPDITGYR"	"[R].sTTPDITGYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"670.35626"	"1339.70525"	"1339.70551"	"-0.20"	"-0.00013"	"7/84"	"7"	"84"	"1051819.8848877"	"HCD"	"MS2"	"25.31146"	"69.3"	"100.000"	"48.0351"	"14520"	"14520"	"14493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.5"	""	"94.8"	""	"85.9"	""	"109.1"	""	"127.2"	"135.6"	""	"674"	"29"	"35.000"	"28.000"	"0.0407033262430985"	"18"	"0.0001991"	"0.002235"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTENMK"	"[K].vGSTENmk.[H]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"670.36670"	"1339.72612"	"1339.72917"	"-2.28"	"-0.00153"	"7/64"	"7"	"64"	"723730.03137207"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"27.2098"	"6136"	"6136"	"6112"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.0"	""	"47.1"	""	"53.9"	""	"182.9"	""	"123.0"	"76.9"	""	"720"	"30"	"35.000"	"28.000"	"0.0321589974143986"	"16"	"0.004634"	"0.05436"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSTENMK"	"[K].vGSTENmk.[H]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"670.36719"	"1339.72710"	"1339.72917"	"-1.55"	"-0.00104"	"6/64"	"6"	"64"	"808648.236999512"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"27.4447"	"6192"	"6192"	"6172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.9"	""	"54.8"	""	"60.7"	""	"185.4"	""	"119.6"	"77.5"	""	"758"	"20"	"35.000"	"28.000"	"0.413655887514079"	"16"	"0.006885"	"0.0866"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDDIEK"	"[K].yVDDIEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"670.37842"	"1339.74956"	"1339.75095"	"-1.04"	"-0.00070"	"12/54"	"12"	"54"	"1146736.17370605"	"HCD"	"MS2"	"20.4531"	"105.1"	"100.000"	"63.1910"	"20676"	"20676"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.8"	""	"100.8"	""	"120.4"	""	"204.6"	"0.3"	"217.1"	"226.9"	""	"689"	"32"	"35.000"	"28.000"	"0.0195969834675703"	"25"	"0.001049"	"0.008905"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDDIEK"	"[K].yVDDIEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"670.37878"	"1339.75029"	"1339.75095"	"-0.49"	"-0.00033"	"6/54"	"6"	"54"	"600117.934875488"	"HCD"	"MS2"	"18.65114"	"59.2"	"100.000"	"63.5204"	"20810"	"20810"	"20789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.4"	""	"65.5"	""	"75.2"	""	"108.8"	"0.8"	"109.3"	"123.7"	""	"694"	"17"	"35.000"	"28.000"	"0.689174936323008"	"23"	"0.00212"	"0.01927"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDDIEK"	"[K].yVDDIEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"670.37915"	"1339.75102"	"1339.75095"	"0.05"	"0.00004"	"6/54"	"6"	"54"	"675642.202697754"	"HCD"	"MS2"	"4.98922"	"68.0"	"100.000"	"63.4590"	"20817"	"20817"	"20798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.1"	""	"76.3"	""	"88.4"	""	"125.4"	""	"132.4"	"141.8"	""	"667"	"28"	"35.000"	"28.000"	"0.0483165413157178"	"24"	"0.0008247"	"0.007556"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDDIEK"	"[K].yVDDIEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"670.37927"	"1339.75127"	"1339.75095"	"0.24"	"0.00016"	"12/54"	"12"	"54"	"1121438.91601563"	"HCD"	"MS2"	"12.88539"	"100.9"	"100.000"	"63.1574"	"20694"	"20694"	"20673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.3"	""	"110.5"	""	"110.8"	""	"204.0"	"0.2"	"205.1"	"205.6"	""	"667"	"34"	"35.000"	"28.000"	"0.0130947085955767"	""	"0.0005161"	"0.006782"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQSYQK"	"[R].vEQSYQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"670.38367"	"1339.76006"	"1339.76219"	"-1.59"	"-0.00106"	"12/60"	"12"	"60"	"928400.609680176"	"HCD"	"MS2"	"0"	"83.4"	"100.000"	"37.8500"	"10389"	"10389"	"10364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.5"	""	"108.3"	""	"115.9"	""	"130.3"	""	"152.8"	"164.7"	""	"636"	"32"	"35.000"	"28.000"	"0.0220509406313269"	"19"	"0.001348"	"0.01106"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLYAQGK"	"[K].dSLYAQGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"670.38483"	"1339.76238"	"1339.76219"	"0.14"	"0.00009"	"11/62"	"11"	"62"	"1474727.99993896"	"HCD"	"MS2"	"0"	"129.5"	"100.000"	"45.5215"	"13539"	"13539"	"13512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.9"	""	"172.2"	""	"164.6"	""	"267.5"	"1.1"	"222.9"	"199.2"	""	"622"	"34"	"34.000"	"27.000"	"0.0137644983804777"	"22"	"0.0001686"	"0.001145"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLYAQGK"	"[K].dSLYAQGk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"670.38489"	"1339.76250"	"1339.76219"	"0.23"	"0.00016"	"6/62"	"6"	"62"	"1259477.82629395"	"HCD"	"MS2"	"0"	"104.6"	"100.000"	"45.7205"	"13586"	"13586"	"13557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.2"	""	"122.2"	""	"141.0"	""	"210.3"	"1.3"	"176.5"	"166.6"	""	"622"	"41"	"34.000"	"27.000"	"0.0025047269521291"	"22"	"9.9E-05"	"0.0008056"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQSYQK"	"[R].vEQSYQk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"670.38501"	"1339.76274"	"1339.76219"	"0.42"	"0.00028"	"6/60"	"6"	"60"	"656034.635192871"	"HCD"	"MS2"	"100"	"61.6"	"100.000"	"37.7325"	"10377"	"10377"	"10350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.6"	""	"82.3"	""	"89.2"	""	"91.8"	""	"109.8"	"113.7"	""	"650"	"24"	"35.000"	"28.000"	"0.130582013525905"	"16"	"0.001615"	"0.01331"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEIIPLQR"	"[K].eLEIIPLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"670.41077"	"1339.81426"	"1339.81467"	"-0.31"	"-0.00021"	"6/70"	"6"	"70"	"975252.598754883"	"HCD"	"MS2"	"26.16191"	"39.2"	"100.000"	"103.0118"	"36785"	"36785"	"36762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.3"	""	"52.1"	""	"58.5"	""	"64.0"	"0.2"	"61.7"	"67.9"	""	"311"	"34"	"31.000"	"24.000"	"0.00569810428577381"	""	"9.9E-05"	"0.0005107"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEIIPLQR"	"[K].eLEIIPLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"670.41095"	"1339.81462"	"1339.81467"	"-0.03"	"-0.00002"	"13/70"	"13"	"70"	"940231.881896973"	"HCD"	"MS2"	"32.23304"	"40.4"	"100.000"	"103.2427"	"36892"	"36892"	"36873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.2"	""	"65.2"	""	"54.7"	""	"52.8"	"0.3"	"63.5"	"65.3"	""	"312"	"35"	"31.000"	"24.000"	"0.00509477018188844"	""	"0"	"0.0003438"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEIIPLQR"	"[K].eLEIIPLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"670.41095"	"1339.81462"	"1339.81467"	"-0.03"	"-0.00002"	"13/70"	"13"	"70"	"2543247.8637085"	"HCD"	"MS2"	"0"	"97.9"	"100.000"	"103.3057"	"36900"	"36900"	"36883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.8"	""	"141.2"	""	"136.2"	""	"148.3"	""	"171.7"	"168.2"	""	"312"	"37"	"31.000"	"24.000"	"0.0032818943660357"	""	"0"	"0.0002641"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEIIPLQR"	"[K].eLEIIPLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"670.41113"	"1339.81499"	"1339.81467"	"0.24"	"0.00016"	"13/70"	"13"	"70"	"2519385.63232422"	"HCD"	"MS2"	"0.4845127"	"98.9"	"100.000"	"103.5495"	"37016"	"37016"	"36999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.3"	""	"124.8"	""	"144.2"	""	"151.8"	""	"174.2"	"171.9"	""	"311"	"38"	"31.000"	"24.000"	"0.00230001354360156"	""	"0"	"0.000231"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEIIPLQR"	"[K].eLEIIPLQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"670.41150"	"1339.81572"	"1339.81467"	"0.79"	"0.00053"	"6/70"	"6"	"70"	"210095.165100098"	"HCD"	"MS2"	"59.1525"	"9.5"	"100.000"	"103.8651"	"37143"	"37143"	"37118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"12.2"	""	"11.4"	""	"18.3"	""	"19.0"	"19.4"	""	"313"	"12"	"31.000"	"24.000"	"1.09273371238077"	"22"	"0.003529"	"0.03848"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDSFTFIPR"	"[R].eDSFTFIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"670.85571"	"1340.70415"	"1340.70478"	"-0.47"	"-0.00032"	"7/72"	"7"	"72"	"246604.823913574"	"HCD"	"MS2"	"30.09667"	"16.2"	"100.000"	"98.0030"	"34756"	"34756"	"34734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.0"	""	"22.5"	""	"23.0"	""	"25.1"	""	"32.0"	"32.4"	""	"615"	"35"	"34.000"	"27.000"	"0.00979140737930784"	"24"	"9.9E-05"	"0.000535"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDSFTFIPR"	"[R].eDSFTFIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"670.85571"	"1340.70415"	"1340.70478"	"-0.47"	"-0.00032"	"7/72"	"7"	"72"	"285927.336547852"	"HCD"	"MS2"	"37.38254"	"18.8"	"100.000"	"97.9615"	"34771"	"34771"	"34742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"20.8"	""	"29.7"	""	"37.4"	""	"32.7"	"29.8"	""	"615"	"33"	"34.000"	"27.000"	"0.0163623289724539"	"19"	"9.9E-05"	"0.0004781"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"447.57639"	"1340.71460"	"1340.71602"	"-1.05"	"-0.00047"	"9/80"	"9"	"80"	"2487694.31048584"	"HCD"	"MS2"	"22.04086"	"37.6"	"100.000"	"65.7791"	"21727"	"21727"	"21707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.9"	""	"42.3"	""	"61.0"	""	"62.5"	"0.7"	"71.0"	"70.3"	""	"660"	"32"	"35.000"	"28.000"	"0.0206306988615976"	"20"	"0.0001991"	"0.004197"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"447.57642"	"1340.71469"	"1340.71602"	"-0.99"	"-0.00044"	"10/80"	"10"	"80"	"2196891.40557861"	"HCD"	"MS2"	"28.53257"	"37.9"	"100.000"	"65.7524"	"21750"	"21750"	"21725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"44.7"	""	"48.8"	""	"54.9"	"0.8"	"78.5"	"83.7"	""	"652"	"28"	"35.000"	"28.000"	"0.0579719087672688"	"24"	"0.0001686"	"0.001575"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"447.57648"	"1340.71488"	"1340.71602"	"-0.85"	"-0.00038"	"9/80"	"9"	"80"	"1431609.72363281"	"HCD"	"MS2"	"23.72161"	"29.9"	"100.000"	"66.0819"	"21884"	"21884"	"21862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.6"	""	"37.7"	""	"43.8"	""	"49.5"	"1.0"	"62.2"	"61.3"	""	"652"	"31"	"35.000"	"28.000"	"0.0237803148342989"	"22"	"0.0001686"	"0.001778"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"670.86127"	"1340.71526"	"1340.71602"	"-0.57"	"-0.00038"	"7/80"	"7"	"80"	"7537127.10736084"	"HCD"	"MS2"	"9.280996"	"359.2"	"100.000"	"65.6958"	"21693"	"21693"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"534.3"	""	"446.4"	""	"476.4"	""	"575.3"	"1.5"	"642.3"	"727.6"	""	"669"	"43"	"35.000"	"28.000"	"0.00187238917700114"	"20"	"0"	"0.0003505"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"447.57663"	"1340.71534"	"1340.71602"	"-0.51"	"-0.00023"	"5/80"	"5"	"80"	"1274879.50408936"	"HCD"	"MS2"	"26.57018"	"26.9"	"100.000"	"66.0921"	"21855"	"21855"	"21833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"32.2"	""	"35.3"	""	"45.4"	""	"49.9"	"62.4"	""	"669"	"25"	"35.000"	"28.000"	"0.114655824599788"	"15"	"0.0001991"	"0.003323"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"670.86176"	"1340.71623"	"1340.71602"	"0.16"	"0.00011"	"7/80"	"7"	"80"	"6961580.25628662"	"HCD"	"MS2"	"0"	"332.7"	"100.000"	"65.6971"	"21727"	"21727"	"21710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"514.9"	""	"408.7"	""	"421.7"	""	"509.2"	""	"607.7"	"692.7"	""	"671"	"45"	"35.000"	"28.000"	"0.0011579572454718"	"21"	"0"	"0.0002276"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"670.86176"	"1340.71623"	"1340.71602"	"0.16"	"0.00011"	"7/80"	"7"	"80"	"9568980.93652344"	"HCD"	"MS2"	"0"	"393.3"	"92.452"	"65.9899"	"21847"	"21847"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"632.0"	""	"439.9"	""	"479.8"	""	"643.3"	"0.8"	"719.3"	"812.7"	""	"671"	"45"	"35.000"	"28.000"	"0.00108066857947559"	"20"	"9.9E-05"	"0.0005789"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDIAFAYQR"	"[R].qDIAFAYQR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"670.86188"	"1340.71648"	"1340.71602"	"0.34"	"0.00023"	"7/80"	"7"	"80"	"8546373.15844727"	"HCD"	"MS2"	"0"	"373.1"	"100.000"	"66.0002"	"21818"	"21818"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"582.2"	""	"421.0"	""	"474.1"	""	"604.4"	""	"678.9"	"782.1"	""	"655"	"45"	"35.000"	"28.000"	"0.00106711519578158"	"20"	"0"	"0.0002831"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQSQGFK"	"[K].sVqSqGFk.[L]"	"N-Term(TMT6plex); Q3(Deamidated); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"670.87646"	"1340.74565"	"1340.74620"	"-0.41"	"-0.00028"	"7/72"	"7"	"72"	"953938.660644531"	"HCD"	"MS2"	"18.88848"	"86.9"	"100.000"	"60.0019"	"19382"	"19382"	"19369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.3"	""	"106.9"	""	"93.3"	""	"156.8"	""	"167.4"	"186.1"	""	"694"	"10"	"35.000"	"28.000"	"3.63353606173662"	"20"	"0.007178"	"0.09185"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLADYASK"	"[K].dLADYASk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"670.87653"	"1340.74578"	"1340.74620"	"-0.32"	"-0.00021"	"7/68"	"7"	"68"	"377445.726135254"	"HCD"	"MS2"	"19.32644"	"36.9"	"100.000"	"66.9569"	"22203"	"22203"	"22176"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"38.5"	""	"40.6"	""	"63.2"	""	"82.8"	"81.0"	""	"695"	"31"	"35.000"	"28.000"	"0.0250584849016057"	"19"	"9.9E-05"	"0.0006421"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQSQGFK"	"[K].sVqSqGFk.[L]"	"N-Term(TMT6plex); Q3(Deamidated); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"P37996"	"ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus OX=10116 GN=Arl3 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"670.87653"	"1340.74578"	"1340.74620"	"-0.32"	"-0.00021"	"8/72"	"8"	"72"	"839472.257324219"	"HCD"	"MS2"	"23.69137"	"79.3"	"100.000"	"59.8382"	"19349"	"19349"	"19327"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.3"	""	"88.2"	""	"82.4"	""	"142.0"	""	"146.4"	"181.4"	""	"695"	"12"	"35.000"	"28.000"	"2.26962867044996"	"20"	"0.006033"	"0.0737"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLADYASK"	"[K].dLADYASk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"Q6P7A2"	"Ubiquitin conjugation factor E4 A OS=Rattus norvegicus OX=10116 GN=Ube4a PE=2 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"670.87671"	"1340.74614"	"1340.74620"	"-0.05"	"-0.00003"	"7/68"	"7"	"68"	"364109.567687988"	"HCD"	"MS2"	"22.69021"	"33.7"	"100.000"	"66.9808"	"22245"	"22245"	"22219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.9"	""	"32.9"	""	"39.0"	""	"51.5"	"0.7"	"70.4"	"82.2"	""	"695"	"31"	"35.000"	"28.000"	"0.029171234531549"	"21"	"0"	"0.0002288"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSEPFFK"	"[K].qSEPFFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"670.88403"	"1340.76079"	"1340.76146"	"-0.50"	"-0.00033"	"6/62"	"6"	"62"	"402862.36895752"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"71.9159"	"24218"	"24218"	"24191"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"50.3"	""	"47.4"	""	"69.1"	"1.0"	"76.2"	"70.0"	""	"651"	"28"	"35.000"	"28.000"	"0.0537713565323545"	"23"	"0.002462"	"0.02295"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSEPFFK"	"[K].qSEPFFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"670.88403"	"1340.76079"	"1340.76146"	"-0.50"	"-0.00033"	"6/62"	"6"	"62"	"579693.890625"	"HCD"	"MS2"	"0"	"56.9"	"100.000"	"71.6078"	"24092"	"24092"	"24068"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.5"	""	"69.8"	""	"68.7"	""	"99.6"	""	"107.0"	"114.1"	""	"651"	"28"	"35.000"	"28.000"	"0.0485904580317963"	"24"	"0.001162"	"0.009248"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSEPFFK"	"[K].qSEPFFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"670.88409"	"1340.76091"	"1340.76146"	"-0.41"	"-0.00027"	"10/62"	"10"	"62"	"488231.184753418"	"HCD"	"MS2"	"11.05395"	"48.4"	"100.000"	"71.6764"	"24151"	"24151"	"24123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.1"	""	"56.5"	""	"66.1"	""	"94.0"	""	"84.7"	"92.5"	""	"651"	"22"	"35.000"	"28.000"	"0.190349172389029"	"24"	"0.001999"	"0.01738"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSEPFFK"	"[K].qSEPFFk.[V]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"670.88434"	"1340.76140"	"1340.76146"	"-0.04"	"-0.00003"	"6/62"	"6"	"62"	"473055.460571289"	"HCD"	"MS2"	"8.014502"	"43.8"	"100.000"	"71.9777"	"24274"	"24274"	"24250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.2"	""	"57.1"	""	"58.1"	""	"69.0"	""	"78.1"	"85.6"	""	"648"	"26"	"35.000"	"28.000"	"0.0836652301765609"	"23"	"0.000885"	"0.007734"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAPDEKI"	"[R].lPAPDEkI.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"1"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"670.91321"	"1340.81914"	"1340.81897"	"0.12"	"0.00008"	"5/58"	"5"	"58"	"1168666.862854"	"HCD"	"MS2"	"2.22943"	"65.8"	"100.000"	"83.5330"	"28951"	"28951"	"28940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.9"	""	"72.1"	""	"75.2"	""	"59.5"	""	"64.6"	"259.6"	""	"343"	"30"	"32.000"	"25.000"	"0.0157131814055923"	"25"	"0.008868"	"0.1125"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAPDEKI"	"[R].lPAPDEkI.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"1"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"670.91339"	"1340.81951"	"1340.81897"	"0.40"	"0.00027"	"6/58"	"6"	"58"	"832530.49041748"	"HCD"	"MS2"	"3.821015"	"30.8"	"100.000"	"83.8008"	"29060"	"29060"	"29048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"34.1"	""	"30.0"	""	"35.2"	""	"43.0"	"107.6"	""	"361"	"30"	"32.000"	"25.000"	"0.0171979707606269"	""	"0.008135"	"0.1042"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPAPDEKI"	"[R].lPAPDEkI.[-]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"1"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"670.91394"	"1340.82060"	"1340.81897"	"1.22"	"0.00082"	"5/58"	"5"	"58"	"288800.825927734"	"HCD"	"MS2"	"29.86663"	"19.1"	"100.000"	"83.2334"	"28830"	"28830"	"28810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.0"	""	"23.4"	""	"22.5"	""	"23.9"	""	"23.9"	"60.5"	""	"361"	"30"	"32.000"	"25.000"	"0.0170402988169609"	"22"	"0.003317"	"0.03719"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSFEQPDSR"	"[R].fSFEQPDSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"671.33496"	"1341.66265"	"1341.66365"	"-0.75"	"-0.00050"	"7/84"	"7"	"84"	"431709.696472168"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"68.4794"	"22821"	"22821"	"22796"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.9"	""	"34.3"	""	"39.5"	""	"53.2"	""	"56.4"	"54.5"	""	"438"	"60"	"33.000"	"26.000"	"2.05799405013655E-05"	"26"	"0"	"7.332E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSFEQPDSR"	"[R].fSFEQPDSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"671.33563"	"1341.66399"	"1341.66365"	"0.25"	"0.00017"	"7/84"	"7"	"84"	"651861.999389648"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"68.7607"	"22934"	"22934"	"22920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.5"	""	"49.2"	""	"47.1"	""	"63.8"	""	"78.8"	"67.3"	""	"444"	"56"	"33.000"	"26.000"	"5.71943296854572E-05"	""	"9.9E-05"	"0.0005021"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSFEQPDSR"	"[R].fSFEQPDSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"671.33582"	"1341.66435"	"1341.66365"	"0.53"	"0.00035"	"7/84"	"7"	"84"	"503002.410522461"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"68.8585"	"23008"	"23008"	"22985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.5"	""	"35.4"	""	"44.8"	""	"52.9"	"0.3"	"62.3"	"58.6"	""	"458"	"56"	"33.000"	"26.000"	"6.13529546383558E-05"	""	"0"	"5.88E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSFEQPDSR"	"[R].fSFEQPDSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"671.33588"	"1341.66448"	"1341.66365"	"0.62"	"0.00042"	"7/84"	"7"	"84"	"538141.405883789"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"68.5497"	"22882"	"22882"	"22858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.0"	""	"41.7"	""	"41.1"	""	"55.6"	""	"71.0"	"72.1"	""	"458"	"52"	"33.000"	"26.000"	"0.000129967714638557"	"26"	"0"	"0.000106"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAHSDWVR"	"[K].lEAHSDWVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"447.90808"	"1341.70969"	"1341.71126"	"-1.17"	"-0.00052"	"8/72"	"8"	"72"	"3242527.43359375"	"HCD"	"MS2"	"23.13688"	"74.4"	"100.000"	"45.4755"	"13520"	"13520"	"13496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.0"	""	"90.2"	""	"96.7"	""	"134.4"	""	"142.5"	"150.6"	""	"669"	"44"	"35.000"	"28.000"	"0.00138164389415709"	""	"0"	"0.0001256"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAHSDWVR"	"[K].lEAHSDWVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"447.90811"	"1341.70978"	"1341.71126"	"-1.11"	"-0.00049"	"8/72"	"8"	"72"	"3246478.81390381"	"HCD"	"MS2"	"17.29943"	"70.1"	"100.000"	"45.7851"	"13612"	"13612"	"13589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.3"	""	"75.9"	""	"96.8"	""	"120.9"	""	"133.5"	"152.4"	""	"669"	"54"	"35.000"	"28.000"	"0.000137846620138057"	""	"9.9E-05"	"0.0004354"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAHSDWVR"	"[K].lEAHSDWVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"3"	"3"	"0.7027"	"0.0000"	"1"	"1"	"1"	"447.90826"	"1341.71024"	"1341.71126"	"-0.76"	"-0.00034"	"8/72"	"8"	"72"	"1918317.44042969"	"HCD"	"MS2"	"58.98244"	"61.1"	"100.000"	"45.7838"	"13646"	"13646"	"13621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.0"	""	"81.3"	""	"84.2"	""	"93.0"	""	"122.8"	"120.1"	""	"657"	"37"	"35.000"	"28.000"	"0.00723661343113061"	"26"	"0.0001686"	"0.001454"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDMAVPDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"671.37292"	"1341.73857"	"1341.73979"	"-0.91"	"-0.00061"	"13/82"	"13"	"82"	"919965.061462402"	"HCD"	"MS2"	"7.316484"	"30.7"	"100.000"	"98.5060"	"34959"	"34959"	"34943"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.6"	""	"39.1"	""	"38.6"	""	"42.4"	"0.5"	"58.1"	"70.1"	""	"673"	"33"	"35.000"	"28.000"	"0.017538202028686"	""	"0.001872"	"0.01545"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDMAVPDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4390"	"0.0000"	"1"	"1"	"1"	"671.37329"	"1341.73931"	"1341.73979"	"-0.36"	"-0.00024"	"9/82"	"9"	"82"	"883652.583618164"	"HCD"	"MS2"	"10.0835"	"29.6"	"100.000"	"98.5388"	"35002"	"35002"	"34982"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.5"	""	"36.9"	""	"39.6"	""	"44.0"	""	"56.4"	"63.5"	""	"652"	"41"	"35.000"	"28.000"	"0.0026014626804936"	""	"0.0001991"	"0.004888"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDMAVPDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4884"	"0.0000"	"1"	"1"	"1"	"671.37341"	"1341.73955"	"1341.73979"	"-0.18"	"-0.00012"	"8/82"	"8"	"82"	"2345737.73516846"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"98.8367"	"35123"	"35123"	"35110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.8"	""	"63.8"	""	"70.4"	""	"64.6"	""	"119.8"	"123.3"	""	"654"	"43"	"35.000"	"28.000"	"0.00173599213263533"	""	"0"	"0.0001605"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDMAVPDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5106"	"0.0000"	"1"	"1"	"1"	"671.37347"	"1341.73967"	"1341.73979"	"-0.09"	"-0.00006"	"8/82"	"8"	"82"	"2362102.67987061"	"HCD"	"MS2"	"0"	"56.0"	"100.000"	"98.8060"	"35080"	"35080"	"35063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.8"	""	"65.1"	""	"73.5"	""	"68.2"	""	"129.4"	"126.1"	""	"655"	"47"	"35.000"	"28.000"	"0.000696965537559339"	""	"0"	"0.0002756"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEMAVPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"671.37354"	"1341.73979"	"1341.73979"	"0.00"	"0.00000"	"13/82"	"13"	"82"	"2870370.04650879"	"HCD"	"MS2"	"38.38207"	"88.2"	"100.000"	"89.3939"	"31317"	"31317"	"31302"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.0"	""	"112.0"	""	"137.3"	""	"118.0"	"0.9"	"167.8"	"172.6"	""	"654"	"29"	"35.000"	"28.000"	"0.0456612454065291"	"23"	"0.0001991"	"0.003084"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEMAVPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"671.37408"	"1341.74089"	"1341.73979"	"0.82"	"0.00055"	"12/82"	"12"	"82"	"722930.233764648"	"HCD"	"MS2"	"6.024516"	"26.7"	"100.000"	"89.2424"	"31216"	"31216"	"31202"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"34.7"	""	"38.6"	""	"29.3"	""	"58.0"	"56.8"	""	"655"	"28"	"35.000"	"28.000"	"0.0511930852964913"	"20"	"0.0001991"	"0.002149"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMAVPDVR"	"[K].vPEMAVPDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"671.37415"	"1341.74101"	"1341.73979"	"0.91"	"0.00061"	"6/82"	"6"	"82"	"620316.539489746"	"HCD"	"MS2"	"10.89483"	"23.6"	"100.000"	"89.1169"	"31205"	"31205"	"31186"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"25.6"	""	"28.8"	""	"34.0"	""	"45.6"	"55.5"	""	"656"	"30"	"35.000"	"28.000"	"0.0299139555308739"	"23"	"0.002166"	"0.01989"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLQQHK"	"[R].eTLQQHk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"671.39673"	"1341.78618"	"1341.78907"	"-2.15"	"-0.00144"	"12/56"	"12"	"56"	"514247.426025391"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"24.8878"	"5190"	"5190"	"5166"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.7"	""	"43.6"	""	"52.9"	""	"63.9"	"0.1"	"78.6"	"82.2"	""	"545"	"36"	"34.000"	"27.000"	"0.00725047578795175"	""	"0.0001991"	"0.002836"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLQQHK"	"[R].eTLQQHk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"447.93393"	"1341.78724"	"1341.78907"	"-1.37"	"-0.00061"	"6/56"	"6"	"56"	"13677418.6048584"	"HCD"	"MS2"	"28.86717"	"647.1"	"100.000"	"24.8718"	"5183"	"5183"	"5166"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1067.7"	""	"787.9"	""	"779.6"	""	"1014.8"	""	"1224.7"	"1259.2"	""	"522"	"34"	"34.000"	"27.000"	"0.011006278739486"	"27"	"0.002286"	"0.02161"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLQQHK"	"[R].eTLQQHk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"671.39771"	"1341.78813"	"1341.78907"	"-0.70"	"-0.00047"	"6/56"	"6"	"56"	"560670.51776123"	"HCD"	"MS2"	"0"	"39.8"	"100.000"	"24.7795"	"5183"	"5183"	"5160"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.8"	""	"45.7"	""	"55.5"	""	"61.8"	"0.4"	"74.3"	"66.2"	""	"529"	"29"	"34.000"	"27.000"	"0.0360102118512243"	"25"	"0.0001991"	"0.004549"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQPAIVK"	"[K].nLQPAIVk.[V]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"671.42920"	"1341.85112"	"1341.85061"	"0.38"	"0.00026"	"7/72"	"7"	"72"	"392576.050231934"	"HCD"	"MS2"	"37.7118"	"27.1"	"100.000"	"75.8890"	"25828"	"25828"	"25801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.7"	""	"37.4"	""	"33.5"	""	"58.7"	""	"32.4"	"51.2"	""	"298"	"29"	"31.000"	"24.000"	"0.0186718035066271"	""	"9.9E-05"	"0.0007417"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENGDFASFR"	"[K].aENGDFASFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"671.83228"	"1342.65727"	"1342.65889"	"-1.21"	"-0.00081"	"8/98"	"8"	"98"	"2449744.67486572"	"HCD"	"MS2"	"43.83729"	"115.2"	"100.000"	"57.2382"	"18256"	"18256"	"18238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.0"	""	"155.8"	""	"135.2"	""	"187.2"	""	"211.3"	"208.0"	""	"410"	"28"	"33.000"	"26.000"	"0.0295633647062598"	"21"	"0"	"3.622E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AENGDFASFR"	"[K].aENGDFASFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"671.83240"	"1342.65752"	"1342.65889"	"-1.03"	"-0.00069"	"8/98"	"8"	"98"	"2393554.5256958"	"HCD"	"MS2"	"42.51321"	"114.7"	"100.000"	"56.9456"	"18172"	"18172"	"18153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.2"	""	"153.7"	""	"142.0"	""	"192.9"	""	"219.2"	"210.5"	""	"414"	"33"	"33.000"	"26.000"	"0.010185218388606"	"22"	"0"	"7.343E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"671.84528"	"1342.68328"	"1342.68405"	"-0.57"	"-0.00039"	"12/72"	"12"	"72"	"6965541.50488281"	"HCD"	"MS2"	"0.2170254"	"309.6"	"100.000"	"95.3096"	"33666"	"33666"	"33649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"788.9"	""	"69.4"	""	"115.9"	""	"101.0"	""	"105.3"	"1765.5"	""	"503"	"38"	"34.000"	"27.000"	"0.00372853298414207"	"16"	"0"	"0.0002963"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"671.84552"	"1342.68376"	"1342.68405"	"-0.21"	"-0.00014"	"12/72"	"12"	"72"	"784343.928771973"	"HCD"	"MS2"	"13.89323"	"44.3"	"100.000"	"95.0139"	"33578"	"33578"	"33562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.4"	""	"18.7"	""	"20.4"	""	"23.9"	""	"27.8"	"222.1"	""	"501"	"39"	"33.000"	"26.000"	"0.00296351909709154"	"17"	"0"	"0.0001277"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"671.84552"	"1342.68376"	"1342.68405"	"-0.21"	"-0.00014"	"13/72"	"13"	"72"	"1042206.67297363"	"HCD"	"MS2"	"0"	"56.2"	"100.000"	"95.6159"	"33822"	"33822"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.5"	""	"21.1"	""	"24.4"	""	"29.4"	"0.4"	"26.3"	"318.2"	""	"501"	"39"	"33.000"	"26.000"	"0.00296351909709154"	"16"	"0"	"7.561E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"671.84583"	"1342.68437"	"1342.68405"	"0.24"	"0.00016"	"11/72"	"11"	"72"	"868268.979125977"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"95.6299"	"33795"	"33795"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.9"	""	"19.2"	""	"21.3"	""	"26.4"	"0.2"	"20.8"	"258.2"	""	"491"	"36"	"33.000"	"26.000"	"0.00590271067401703"	"18"	"9.9E-05"	"0.0004447"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"671.84607"	"1342.68486"	"1342.68405"	"0.61"	"0.00041"	"11/72"	"11"	"72"	"701175.399291992"	"HCD"	"MS2"	"12.99962"	"42.8"	"100.000"	"95.0168"	"33547"	"33547"	"33530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.3"	""	"23.7"	""	"23.5"	""	"27.9"	""	"34.1"	"195.6"	""	"508"	"36"	"34.000"	"27.000"	"0.00629265202638854"	"16"	"0"	"0.0002214"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVFDDTFDR"	"[R].vVFDDTFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"671.84613"	"1342.68498"	"1342.68405"	"0.70"	"0.00047"	"8/72"	"8"	"72"	"6839891.82727051"	"HCD"	"MS2"	"0"	"289.6"	"100.000"	"95.3047"	"33697"	"33697"	"33680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"736.3"	""	"63.9"	""	"111.5"	""	"82.8"	""	"95.4"	"1664.0"	""	"508"	"41"	"34.000"	"27.000"	"0.00211755020893387"	"16"	"0"	"0.0002617"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"671.85693"	"1342.70659"	"1342.70771"	"-0.83"	"-0.00056"	"10/64"	"10"	"64"	"1180779.78253174"	"HCD"	"MS2"	"48.63888"	"102.3"	"100.000"	"57.8635"	"18511"	"18511"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.9"	""	"146.7"	""	"153.1"	""	"130.1"	"0.9"	"175.3"	"188.6"	""	"610"	"22"	"34.000"	"27.000"	"0.181676953776348"	"17"	"0.0001991"	"0.003575"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"671.85724"	"1342.70720"	"1342.70771"	"-0.38"	"-0.00025"	"7/64"	"7"	"64"	"1261456.55706787"	"HCD"	"MS2"	"37.36049"	"98.0"	"100.000"	"59.3435"	"19149"	"19149"	"19134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.4"	""	"139.7"	""	"135.7"	""	"118.1"	""	"164.3"	"204.7"	""	"599"	"22"	"34.000"	"27.000"	"0.197422581625674"	"17"	"0.0001991"	"0.001988"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"671.85730"	"1342.70732"	"1342.70771"	"-0.29"	"-0.00019"	"6/64"	"6"	"64"	"1331785.8336792"	"HCD"	"MS2"	"31.0634"	"111.7"	"100.000"	"59.5504"	"19199"	"19199"	"19173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.1"	""	"146.0"	""	"160.2"	""	"129.8"	""	"202.6"	"229.2"	""	"599"	"26"	"34.000"	"27.000"	"0.0747131120719415"	"18"	"0.0001686"	"0.001917"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.85736"	"1342.70745"	"1342.70771"	"-0.20"	"-0.00013"	"12/64"	"12"	"64"	"835125.826965332"	"HCD"	"MS2"	"4.168133"	"76.5"	"100.000"	"59.8615"	"19325"	"19325"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.5"	""	"103.8"	""	"106.7"	""	"90.5"	""	"153.4"	"149.4"	""	"599"	"31"	"34.000"	"27.000"	"0.025141826596256"	"14"	"9.9E-05"	"0.0006978"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.85748"	"1342.70769"	"1342.70771"	"-0.01"	"-0.00001"	"12/64"	"12"	"64"	"921694.044067383"	"HCD"	"MS2"	"3.616717"	"86.8"	"100.000"	"59.6563"	"19275"	"19275"	"19259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.8"	""	"114.0"	""	"134.1"	""	"104.2"	"1.6"	"153.1"	"168.6"	""	"599"	"32"	"34.000"	"27.000"	"0.0174741808729987"	"15"	"9.9E-05"	"0.0007918"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"671.85767"	"1342.70806"	"1342.70771"	"0.26"	"0.00017"	"11/64"	"11"	"64"	"551529.68170166"	"HCD"	"MS2"	"26.26865"	"43.1"	"100.000"	"61.8633"	"20169"	"20169"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.7"	""	"51.4"	""	"57.1"	""	"68.0"	""	"75.1"	"92.6"	""	"595"	"20"	"34.000"	"27.000"	"0.269455448767215"	"19"	"0.0001991"	"0.003053"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"671.85767"	"1342.70806"	"1342.70771"	"0.26"	"0.00017"	"7/64"	"7"	"64"	"807554.139892578"	"HCD"	"MS2"	"30.89299"	"75.2"	"100.000"	"57.7253"	"18490"	"18490"	"18466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.5"	""	"92.9"	""	"107.2"	""	"98.9"	""	"140.8"	"149.9"	""	"595"	"29"	"34.000"	"27.000"	"0.0380615937986864"	"15"	"9.9E-05"	"0.0009034"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"671.87891"	"1342.75054"	"1342.75280"	"-1.68"	"-0.00113"	"11/100"	"11"	"100"	"576956.890319824"	"HCD"	"MS2"	"22.11937"	"34.4"	"100.000"	"56.5650"	"18018"	"18018"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.9"	""	"38.9"	""	"48.8"	""	"53.8"	""	"63.5"	"66.3"	""	"656"	"35"	"35.000"	"28.000"	"0.00941616030904099"	""	"0.001488"	"0.01248"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"671.87921"	"1342.75115"	"1342.75280"	"-1.23"	"-0.00082"	"14/100"	"14"	"100"	"2240772.27764893"	"HCD"	"MS2"	"44.07318"	"109.5"	"100.000"	"57.2014"	"18241"	"18241"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.8"	""	"139.8"	""	"128.4"	""	"167.0"	"0.4"	"204.3"	"201.5"	""	"657"	"20"	"35.000"	"28.000"	"0.336926657773587"	"28"	"0"	"0.0001336"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"671.87939"	"1342.75151"	"1342.75280"	"-0.96"	"-0.00064"	"7/100"	"7"	"100"	"658742.940612793"	"HCD"	"MS2"	"22.4839"	"37.9"	"100.000"	"56.9009"	"18119"	"18119"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.4"	""	"48.9"	""	"56.8"	""	"59.1"	""	"67.6"	"75.2"	""	"657"	"45"	"35.000"	"28.000"	"0.000989772478945141"	""	"0"	"0.0002627"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPQAEALDR"	"[R].tLPQAEALDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"671.87970"	"1342.75212"	"1342.75280"	"-0.50"	"-0.00034"	"9/100"	"9"	"100"	"1853104.78411865"	"HCD"	"MS2"	"46.95998"	"97.1"	"100.000"	"56.8701"	"18141"	"18141"	"18125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.2"	""	"138.3"	""	"118.2"	""	"143.8"	""	"184.1"	"180.3"	""	"653"	"22"	"35.000"	"28.000"	"0.21972687827683"	"27"	"0.0001686"	"0.001439"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFPDGFHPR"	"[R].aAFPDGFHPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"448.57263"	"1343.70334"	"1343.70579"	"-1.82"	"-0.00081"	"12/72"	"12"	"72"	"1964033.82037354"	"HCD"	"MS2"	"30.69307"	"34.0"	"100.000"	"53.1773"	"16644"	"16644"	"16625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"48.0"	""	"44.6"	""	"56.5"	""	"69.2"	"59.0"	""	"637"	"40"	"35.000"	"28.000"	"0.00319970129203669"	"24"	"0.0001686"	"0.001389"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFPDGFHPR"	"[R].aAFPDGFHPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"P15304"	"Hormone-sensitive lipase OS=Rattus norvegicus OX=10116 GN=Lipe PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"448.57288"	"1343.70407"	"1343.70579"	"-1.27"	"-0.00057"	"11/72"	"11"	"72"	"1937666.38214111"	"HCD"	"MS2"	"26.22051"	"32.8"	"100.000"	"53.4535"	"16723"	"16723"	"16698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.4"	""	"40.7"	""	"46.9"	""	"55.8"	""	"62.7"	"62.4"	""	"659"	"34"	"35.000"	"28.000"	"0.0119634219046748"	"23"	"0.0001686"	"0.001398"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVIGTYDGR"	"[K].yAVIGTYDGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R037"	"WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1"	"Q9R037"	"WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.36072"	"1343.71416"	"1343.71568"	"-1.13"	"-0.00076"	"5/76"	"5"	"76"	"170987.565429688"	"HCD"	"MS2"	"20.81141"	"15.8"	"100.000"	"67.9897"	"22654"	"22654"	"22626"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"21.0"	""	"23.3"	""	"22.3"	""	"24.4"	"39.9"	""	"671"	"30"	"35.000"	"28.000"	"0.0351311627871077"	"14"	"0.0001991"	"0.00448"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVIGTYDGR"	"[K].yAVIGTYDGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R037"	"WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1"	"Q9R037"	"WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.36133"	"1343.71538"	"1343.71568"	"-0.22"	"-0.00015"	"6/76"	"6"	"76"	"409474.476623535"	"HCD"	"MS2"	"10.24098"	"27.2"	"100.000"	"67.6730"	"22494"	"22494"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.4"	""	"35.0"	""	"37.9"	""	"41.5"	""	"50.3"	"54.9"	""	"688"	"44"	"35.000"	"28.000"	"0.00140138815564615"	"15"	"0"	"0.0003246"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAVIGTYDGR"	"[K].yAVIGTYDGR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R037"	"WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1"	"Q9R037"	"WD repeat-containing protein 44 OS=Rattus norvegicus OX=10116 GN=Wdr44 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.36145"	"1343.71562"	"1343.71568"	"-0.04"	"-0.00003"	"11/76"	"11"	"76"	"349463.663024902"	"HCD"	"MS2"	"18.32567"	"26.2"	"100.000"	"67.6257"	"22506"	"22506"	"22483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"37.2"	""	"42.1"	""	"40.0"	"0.2"	"44.1"	"47.1"	""	"683"	"37"	"35.000"	"28.000"	"0.00695649869536503"	"15"	"0"	"0.0001623"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELHALSTGR"	"[K].mELHALSTGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"448.58130"	"1343.72934"	"1343.73029"	"-0.70"	"-0.00031"	"8/84"	"8"	"84"	"4283350.46472168"	"HCD"	"MS2"	"35.41683"	"73.4"	"100.000"	"45.8252"	"13663"	"13663"	"13637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.2"	""	"93.8"	""	"102.0"	""	"105.7"	"2.5"	"132.8"	"139.2"	""	"708"	"60"	"35.000"	"28.000"	"3.47538771829075E-05"	""	"0"	"2.839E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELHALSTGR"	"[K].mELHALSTGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"448.58173"	"1343.73062"	"1343.73029"	"0.25"	"0.00011"	"8/84"	"8"	"84"	"3790346.87078857"	"HCD"	"MS2"	"51.74585"	"68.4"	"100.000"	"46.0932"	"13738"	"13738"	"13713"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.0"	""	"85.3"	""	"100.5"	""	"93.6"	""	"149.2"	"130.8"	""	"691"	"64"	"35.000"	"28.000"	"1.30151162548941E-05"	""	"0"	"3.128E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLGGEIIPR"	"[K].eMLGGEIIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"672.38037"	"1343.75347"	"1343.75544"	"-1.47"	"-0.00099"	"7/82"	"7"	"82"	"281704.41003418"	"HCD"	"MS2"	"27.73641"	"17.0"	"100.000"	"92.1497"	"32390"	"32390"	"32364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"24.1"	""	"23.2"	""	"19.3"	""	"34.8"	"30.9"	""	"694"	"31"	"35.000"	"28.000"	"0.0286635168503281"	"24"	"0"	"0.0002883"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLGGEIIPR"	"[K].eMLGGEIIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.38104"	"1343.75481"	"1343.75544"	"-0.47"	"-0.00031"	"8/82"	"8"	"82"	"329235.593994141"	"HCD"	"MS2"	"12.87364"	"19.1"	"100.000"	"92.4230"	"32536"	"32536"	"32513"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.6"	""	"30.9"	""	"28.1"	""	"23.8"	""	"29.8"	"35.8"	""	"646"	"50"	"35.000"	"28.000"	"0.000348499791280234"	"16"	"0"	"8.853E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLGGEIIPR"	"[K].eMLGGEIIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"672.38135"	"1343.75542"	"1343.75544"	"-0.01"	"-0.00001"	"8/82"	"8"	"82"	"394547.543518066"	"HCD"	"MS2"	"5.74233"	"21.7"	"100.000"	"92.4471"	"32510"	"32510"	"32488"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.9"	""	"31.9"	""	"35.5"	""	"21.0"	""	"39.0"	"40.8"	""	"637"	"57"	"35.000"	"28.000"	"6.93600562494481E-05"	"22"	"0"	"3.383E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMLGGEIIPR"	"[K].eMLGGEIIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"672.38153"	"1343.75578"	"1343.75544"	"0.26"	"0.00017"	"7/82"	"7"	"82"	"321363.99798584"	"HCD"	"MS2"	"39.71326"	"19.1"	"100.000"	"92.1028"	"32406"	"32406"	"32382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"28.4"	""	"28.1"	""	"20.9"	""	"36.2"	"39.9"	""	"635"	"46"	"35.000"	"28.000"	"0.000735772801364992"	"18"	"0"	"1.149E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQNPPQSK"	"[R].sQNPPQSk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q792H5"	"CUGBP Elav-like family member 2 OS=Rattus norvegicus OX=10116 GN=Celf2 PE=2 SV=1"	"Q792H5; Q4QQT3"	"CUGBP Elav-like family member 2 OS=Rattus norvegicus OX=10116 GN=Celf2 PE=2 SV=1; CUGBP Elav-like family member 1 OS=Rattus norvegicus OX=10116 GN=Celf1 PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"672.38739"	"1343.76750"	"1343.76833"	"-0.62"	"-0.00042"	"7/80"	"7"	"80"	"139227.86340332"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"23.3794"	"4617"	"4617"	"4604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"9.1"	""	"12.5"	""	"15.1"	""	"21.5"	"19.9"	""	"685"	"11"	"35.000"	"28.000"	"2.55070701062801"	"20"	"0.006814"	"0.08499"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELLALDPSR"	"[R].tELLALDPSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"672.38916"	"1343.77104"	"1343.77320"	"-1.60"	"-0.00108"	"6/88"	"6"	"88"	"471442.166625977"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"94.3202"	"33299"	"33299"	"33278"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"23.6"	"1.8"	"27.1"	""	"37.4"	""	"34.9"	"52.6"	""	"686"	"42"	"35.000"	"28.000"	"0.0021394104857047"	""	"0"	"0.0002977"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELLALDPSR"	"[R].tELLALDPSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"672.38965"	"1343.77202"	"1343.77320"	"-0.88"	"-0.00059"	"6/88"	"6"	"88"	"886720.569885254"	"HCD"	"MS2"	"11.3653"	"40.1"	"100.000"	"94.0806"	"33166"	"33166"	"33147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"46.2"	""	"60.7"	""	"61.1"	"0.3"	"65.4"	"90.1"	""	"704"	"46"	"35.000"	"28.000"	"0.000882150457067304"	""	"0"	"0.0003475"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELLALDPSR"	"[R].tELLALDPSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"672.38989"	"1343.77251"	"1343.77320"	"-0.51"	"-0.00034"	"6/88"	"6"	"88"	"399558.011352539"	"HCD"	"MS2"	"10.11466"	"20.2"	"100.000"	"94.3922"	"33293"	"33293"	"33271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.3"	""	"21.3"	""	"20.2"	""	"37.1"	""	"39.0"	"50.1"	""	"704"	"42"	"35.000"	"28.000"	"0.00231495558749108"	""	"0"	"0.0002444"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TELLALDPSR"	"[R].tELLALDPSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"P08289"	"Alkaline phosphatase, tissue-nonspecific isozyme OS=Rattus norvegicus OX=10116 GN=Alpl PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"672.38995"	"1343.77263"	"1343.77320"	"-0.42"	"-0.00028"	"6/88"	"6"	"88"	"854812.958862305"	"HCD"	"MS2"	"6.624199"	"37.3"	"100.000"	"94.0201"	"33177"	"33177"	"33158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"49.2"	""	"50.0"	""	"51.4"	""	"66.0"	"86.2"	""	"704"	"46"	"35.000"	"28.000"	"0.00086207026112935"	""	"9.9E-05"	"0.0004442"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].DILLISQNAk.[V]"	"K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"672.40826"	"1343.80925"	"1343.80958"	"-0.25"	"-0.00017"	"7/88"	"7"	"88"	"282257.710021973"	"HCD"	"MS2"	"31.02868"	"17.2"	"100.000"	"87.5836"	"30584"	"30584"	"30566"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"23.7"	""	"24.5"	""	"24.8"	""	"30.4"	"35.9"	""	"753"	"45"	"35.000"	"28.000"	"0.00113963290568014"	""	"0.0001686"	"0.001421"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLISQNAK"	"[K].DILLISQNAk.[V]"	"K10(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"672.40906"	"1343.81084"	"1343.80958"	"0.94"	"0.00063"	"6/88"	"6"	"88"	"269104.124511719"	"HCD"	"MS2"	"12.52156"	"15.0"	"100.000"	"87.6214"	"30564"	"30564"	"30546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"25.1"	""	"22.5"	""	"19.2"	""	"26.9"	"25.7"	""	"745"	"49"	"35.000"	"28.000"	"0.000483199278441523"	""	"0.0001991"	"0.003076"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SESGYGFNVR"	"[K].sESGYGFNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"672.84058"	"1344.67388"	"1344.67454"	"-0.50"	"-0.00033"	"7/80"	"7"	"80"	"1284320.26702881"	"HCD"	"MS2"	"5.507302"	"81.9"	"100.000"	"50.5506"	"15579"	"15579"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.3"	""	"103.0"	""	"109.0"	""	"134.5"	"1.4"	"155.0"	"149.5"	""	"534"	"49"	"34.000"	"27.000"	"0.000330758688603609"	"20"	"0"	"4.695E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SESGYGFNVR"	"[K].sESGYGFNVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"672.84088"	"1344.67449"	"1344.67454"	"-0.04"	"-0.00003"	"8/80"	"8"	"80"	"1242945.51251221"	"HCD"	"MS2"	"5.414042"	"79.1"	"100.000"	"50.8325"	"15659"	"15659"	"15637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.8"	""	"116.6"	""	"122.2"	""	"122.8"	""	"136.6"	"141.2"	""	"531"	"53"	"34.000"	"27.000"	"0.000133371957518194"	"21"	"0"	"4.048E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"448.91098"	"1344.71839"	"1344.71999"	"-1.19"	"-0.00053"	"5/56"	"5"	"56"	"1800053.81243896"	"HCD"	"MS2"	"16.07183"	"86.5"	"100.000"	"49.8412"	"15254"	"15254"	"15234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.1"	""	"91.6"	""	"101.4"	""	"155.8"	""	"171.7"	"177.8"	""	"706"	"28"	"35.000"	"28.000"	"0.0572498964367702"	"25"	"0.005266"	"0.06671"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"448.91116"	"1344.71894"	"1344.71999"	"-0.78"	"-0.00035"	"5/56"	"5"	"56"	"1776281.73834229"	"HCD"	"MS2"	"47.39821"	"86.4"	"100.000"	"49.5014"	"15151"	"15151"	"15127"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.4"	""	"95.4"	""	"119.2"	""	"144.7"	""	"180.0"	"174.1"	""	"705"	"27"	"35.000"	"28.000"	"0.0637028879418852"	"26"	"0.00212"	"0.01964"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"672.86322"	"1344.71916"	"1344.71999"	"-0.61"	"-0.00041"	"5/56"	"5"	"56"	"2737709.10546875"	"HCD"	"MS2"	"20.89243"	"232.2"	"100.000"	"49.7009"	"15197"	"15197"	"15177"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.4"	""	"244.6"	""	"266.1"	""	"403.8"	""	"472.5"	"467.2"	""	"706"	"16"	"35.000"	"28.000"	"0.89903107916252"	"26"	"0.004234"	"0.0484"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"672.86359"	"1344.71990"	"1344.71999"	"-0.07"	"-0.00005"	"5/56"	"5"	"56"	"3132793.48815918"	"HCD"	"MS2"	"27.16419"	"273.6"	"100.000"	"49.3819"	"15102"	"15102"	"15079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"395.4"	""	"290.9"	""	"322.9"	""	"491.6"	""	"559.2"	"537.4"	""	"706"	"15"	"35.000"	"28.000"	"1.21275955608656"	"17"	"0.00455"	"0.05406"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"672.86371"	"1344.72014"	"1344.71999"	"0.11"	"0.00008"	"12/56"	"12"	"56"	"6501415.04815674"	"HCD"	"MS2"	"5.803199"	"556.3"	"100.000"	"50.0135"	"15325"	"15325"	"15308"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"749.4"	""	"526.5"	""	"694.3"	""	"926.9"	""	"1211.4"	"1180.2"	""	"698"	"22"	"35.000"	"28.000"	"0.204562219415396"	"19"	"0.00455"	"0.05373"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDQEK"	"[K].fYGDQEk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"672.86383"	"1344.72038"	"1344.71999"	"0.30"	"0.00020"	"12/56"	"12"	"56"	"6901773.84246826"	"HCD"	"MS2"	"0"	"578.7"	"100.000"	"49.6579"	"15215"	"15215"	"15200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"804.7"	""	"560.8"	""	"681.4"	""	"972.5"	""	"1241.1"	"1242.1"	""	"698"	"20"	"35.000"	"28.000"	"0.390683821330036"	"17"	"0.0065"	"0.08031"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"672.86755"	"1344.72783"	"1344.73206"	"-3.14"	"-0.00211"	"13/86"	"13"	"86"	"2747272.2366333"	"HCD"	"MS2"	"0"	"140.4"	"100.000"	"65.1581"	"21507"	"21507"	"21492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.3"	""	"184.3"	""	"162.7"	""	"192.6"	""	"308.1"	"315.5"	""	"716"	"23"	"35.000"	"28.000"	"0.161392380225843"	"28"	"0.0001686"	"0.001317"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"672.86853"	"1344.72978"	"1344.73206"	"-1.69"	"-0.00114"	"6/86"	"6"	"86"	"1592389.54333496"	"HCD"	"MS2"	"5.879954"	"88.0"	"100.000"	"64.8948"	"21366"	"21366"	"21348"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.6"	""	"111.4"	""	"100.2"	""	"139.9"	""	"173.9"	"189.6"	""	"715"	"41"	"35.000"	"28.000"	"0.00313527793558849"	"28"	"0"	"0.0002497"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"672.86871"	"1344.73015"	"1344.73206"	"-1.42"	"-0.00095"	"7/86"	"7"	"86"	"1588482.23236084"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"64.8756"	"21392"	"21392"	"21373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.6"	""	"121.4"	""	"98.4"	""	"131.3"	""	"198.5"	"196.3"	""	"707"	"42"	"35.000"	"28.000"	"0.00206723294745074"	"27"	"0"	"0.0001783"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"672.87006"	"1344.73284"	"1344.73206"	"0.58"	"0.00039"	"8/86"	"8"	"86"	"2791030.52368164"	"HCD"	"MS2"	"5.489363"	"138.9"	"100.000"	"65.2008"	"21491"	"21491"	"21473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.7"	""	"197.9"	""	"163.9"	""	"180.1"	""	"291.4"	"294.4"	""	"759"	"26"	"35.000"	"28.000"	"0.088963483541391"	""	"9.9E-05"	"0.0005395"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNAQNAELR"	"[K].iSNAQNAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"672.87518"	"1344.74309"	"1344.74329"	"-0.15"	"-0.00010"	"7/98"	"7"	"98"	"762300.608459473"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"38.2293"	"10544"	"10544"	"10518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.3"	""	"58.1"	""	"65.8"	""	"79.8"	""	"90.4"	"88.6"	""	"797"	"53"	"36.000"	"29.000"	"0.000208654773979421"	"25"	"0"	"6.541E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISNAQNAELR"	"[K].iSNAQNAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"672.87531"	"1344.74333"	"1344.74329"	"0.03"	"0.00002"	"8/98"	"8"	"98"	"538103.557495117"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"38.2200"	"10576"	"10576"	"10551"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.4"	""	"45.0"	""	"59.4"	""	"53.0"	"0.1"	"80.9"	"73.9"	""	"793"	"50"	"35.000"	"28.000"	"0.00039467824797988"	"20"	"0"	"6.55E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.1053"	"0.0000"	"1"	"1"	"1"	"672.87854"	"1344.74980"	"1344.73206"	"13.19"	"0.00887"	"8/86"	"8"	"86"	"2971508.51654053"	"HCD"	"MS2"	"39.52407"	"143.5"	"100.000"	"65.2861"	"21526"	"21526"	"21503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.2"	""	"208.3"	""	"193.1"	""	"169.0"	"2.0"	"296.6"	"309.8"	""	"798"	"19"	"36.000"	"29.000"	"0.481917720207606"	""	"0.0001991"	"0.003977"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VELQELNDR"	"[K].vELQELNDR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P48675; P31000"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"672.87872"	"1344.75017"	"1344.73206"	"13.47"	"0.00905"	"7/86"	"7"	"86"	"2829989.53436279"	"HCD"	"MS2"	"42.39661"	"132.8"	"100.000"	"65.2782"	"21556"	"21556"	"21536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.2"	""	"208.8"	""	"187.4"	""	"156.1"	""	"265.7"	"283.3"	""	"771"	"13"	"35.000"	"28.000"	"1.78247883749415"	"20"	"0.004213"	"0.04727"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAETLGNIER"	"[R].iAETLGNIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"672.88733"	"1344.76738"	"1344.76845"	"-0.79"	"-0.00053"	"8/90"	"8"	"90"	"581738.529418945"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"83.9436"	"29117"	"29117"	"29100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.5"	""	"54.1"	""	"52.8"	""	"56.3"	"0.9"	"58.3"	"65.4"	""	"851"	"58"	"36.000"	"29.000"	"6.57505764023595E-05"	"25"	"0"	"3.906E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAETLGNIER"	"[R].iAETLGNIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.88770"	"1344.76811"	"1344.76845"	"-0.25"	"-0.00017"	"6/90"	"6"	"90"	"281388.492492676"	"HCD"	"MS2"	"8.218074"	"20.2"	"100.000"	"84.2577"	"29244"	"29244"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"21.3"	""	"29.1"	""	"31.8"	""	"43.7"	"36.2"	""	"868"	"18"	"36.000"	"29.000"	"0.761184137799325"	"14"	"0.00212"	"0.01949"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAETLGNIER"	"[R].iAETLGNIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"672.88770"	"1344.76811"	"1344.76845"	"-0.25"	"-0.00017"	"8/90"	"8"	"90"	"489732.246643066"	"HCD"	"MS2"	"16.15356"	"31.0"	"100.000"	"83.8203"	"29038"	"29038"	"29023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"37.1"	""	"53.9"	""	"49.8"	""	"55.5"	"56.6"	""	"868"	"55"	"36.000"	"29.000"	"0.000132583576313553"	"24"	"0"	"5.466E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGLTGQLR"	"[K].eLEGLTGQLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"672.88788"	"1344.76848"	"1344.76845"	"0.03"	"0.00002"	"7/86"	"7"	"86"	"294871.390319824"	"HCD"	"MS2"	"8.379106"	"23.4"	"100.000"	"81.6870"	"28178"	"28178"	"28155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"29.5"	""	"28.8"	""	"44.5"	"0.3"	"45.5"	"45.5"	""	"865"	"38"	"36.000"	"29.000"	"0.00665251881931062"	"27"	"0.0001686"	"0.001091"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGLTGQLR"	"[K].eLEGLTGQLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"Q62839"	"Golgin subfamily A member 2 OS=Rattus norvegicus OX=10116 GN=Golga2 PE=1 SV=4"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"672.88788"	"1344.76848"	"1344.76845"	"0.03"	"0.00002"	"7/86"	"7"	"86"	"316346.36920166"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"81.7328"	"28225"	"28225"	"28200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"29.0"	""	"30.0"	""	"36.1"	""	"48.2"	"48.4"	""	"865"	"28"	"36.000"	"29.000"	"0.061515720043062"	"29"	"0.0001686"	"0.001922"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAETLGNIER"	"[R].iAETLGNIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"672.88788"	"1344.76848"	"1344.76845"	"0.03"	"0.00002"	"7/90"	"7"	"90"	"433855.39855957"	"HCD"	"MS2"	"3.45623"	"27.6"	"100.000"	"84.1453"	"29170"	"29170"	"29146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"35.0"	""	"33.9"	""	"46.4"	""	"51.6"	"57.7"	""	"865"	"36"	"36.000"	"29.000"	"0.011775683157437"	"19"	"9.9E-05"	"0.0004798"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDIQTAVR"	"[K].lVTDIQTAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"672.90613"	"1344.80498"	"1344.80483"	"0.11"	"0.00007"	"8/88"	"8"	"88"	"849387.356140137"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"89.8187"	"31486"	"31486"	"31471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.6"	""	"66.8"	""	"64.5"	""	"95.8"	""	"66.0"	"71.9"	""	"802"	"47"	"36.000"	"29.000"	"0.000750143538286685"	"24"	"0"	"1.308E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDIQTAVR"	"[K].lVTDIQTAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"672.90619"	"1344.80510"	"1344.80483"	"0.20"	"0.00014"	"7/88"	"7"	"88"	"2469737.7074585"	"HCD"	"MS2"	"0"	"117.7"	"100.000"	"90.2185"	"31608"	"31608"	"31595"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.7"	""	"169.7"	""	"183.8"	""	"231.1"	""	"170.3"	"174.4"	""	"802"	"52"	"36.000"	"29.000"	"0.000282581920655826"	"24"	"0"	"3.536E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDIQTAVR"	"[K].lVTDIQTAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"672.90631"	"1344.80535"	"1344.80483"	"0.38"	"0.00026"	"7/88"	"7"	"88"	"456884.567993164"	"HCD"	"MS2"	"20.16304"	"32.3"	"100.000"	"90.5205"	"31729"	"31729"	"31716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"41.1"	""	"57.0"	""	"56.1"	""	"57.8"	"46.1"	""	"800"	"38"	"36.000"	"29.000"	"0.00639823211445868"	"23"	"9.9E-05"	"0.0005061"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDIQTAVR"	"[K].lVTDIQTAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"2"	"2"	"0.8154"	"0.0000"	"1"	"1"	"1"	"672.90631"	"1344.80535"	"1344.80483"	"0.38"	"0.00026"	"8/88"	"8"	"88"	"1183265.73083496"	"HCD"	"MS2"	"2.252913"	"57.4"	"100.000"	"89.9308"	"31492"	"31492"	"31475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"84.1"	""	"83.4"	""	"117.5"	"0.6"	"86.7"	"90.3"	""	"800"	"65"	"36.000"	"29.000"	"1.13255679831975E-05"	"29"	"0"	"5.051E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDIQTAVR"	"[K].lVTDIQTAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"672.90643"	"1344.80559"	"1344.80483"	"0.56"	"0.00038"	"8/88"	"8"	"88"	"2075376.74005127"	"HCD"	"MS2"	"0"	"100.4"	"100.000"	"90.1092"	"31602"	"31602"	"31586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.0"	""	"135.7"	""	"167.4"	""	"194.2"	""	"150.8"	"150.7"	""	"798"	"63"	"36.000"	"29.000"	"1.99513779455815E-05"	"26"	"0"	"4.082E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDIQTAVR"	"[K].lVTDIQTAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"P10960"	"Prosaposin OS=Rattus norvegicus OX=10116 GN=Psap PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"672.90765"	"1344.80803"	"1344.80483"	"2.38"	"0.00160"	"7/88"	"7"	"88"	"525284.475219727"	"HCD"	"MS2"	"6.885306"	"39.5"	"100.000"	"90.3929"	"31716"	"31716"	"31698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"57.7"	""	"64.6"	""	"62.7"	""	"72.9"	"64.5"	""	"716"	"27"	"35.000"	"28.000"	"0.0665093994922828"	"21"	"0.0001686"	"0.001231"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEGTLK"	"[K].eLPEGTLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"672.90948"	"1344.81169"	"1344.81389"	"-1.63"	"-0.00110"	"7/66"	"7"	"66"	"751394.828369141"	"HCD"	"MS2"	"35.21397"	"56.6"	"100.000"	"66.6893"	"22127"	"22127"	"22114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.1"	""	"72.5"	""	"72.9"	""	"92.8"	""	"106.4"	"114.4"	""	"697"	"30"	"35.000"	"28.000"	"0.0350108602912021"	"25"	"0.0001686"	"0.001094"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEGTLK"	"[K].eLPEGTLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.1176"	"0.0000"	"1"	"1"	"1"	"672.90985"	"1344.81243"	"1344.81389"	"-1.09"	"-0.00073"	"7/66"	"7"	"66"	"1206381.19049072"	"HCD"	"MS2"	"0"	"86.6"	"100.000"	"66.3767"	"21970"	"21970"	"21958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.0"	""	"119.1"	""	"123.3"	""	"137.1"	""	"142.9"	"168.1"	""	"696"	"17"	"35.000"	"28.000"	"0.757843000778898"	""	"0.007069"	"0.08971"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEGTLK"	"[K].eLPEGTLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"672.91028"	"1344.81328"	"1344.81389"	"-0.45"	"-0.00030"	"7/66"	"7"	"66"	"718595.938842773"	"HCD"	"MS2"	"14.80131"	"55.4"	"100.000"	"66.6698"	"22086"	"22086"	"22072"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"80.7"	""	"68.6"	""	"92.5"	"1.1"	"99.2"	"103.2"	""	"691"	"21"	"35.000"	"28.000"	"0.280832943334697"	"26"	"0.003818"	"0.0412"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVNDAQK"	"[R].vLVNDAQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"672.91571"	"1344.82414"	"1344.82512"	"-0.73"	"-0.00049"	"12/64"	"12"	"64"	"1015591.32867432"	"HCD"	"MS2"	"44.02148"	"85.6"	"100.000"	"50.8058"	"15682"	"15682"	"15655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.3"	""	"86.7"	""	"99.7"	""	"159.1"	"1.7"	"184.6"	"161.9"	""	"640"	"32"	"35.000"	"28.000"	"0.0210935646478183"	"27"	"9.9E-05"	"0.0005738"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLVNDAQK"	"[R].vLVNDAQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"672.91632"	"1344.82536"	"1344.82512"	"0.18"	"0.00012"	"7/64"	"7"	"64"	"1053570.37683105"	"HCD"	"MS2"	"26.29937"	"89.2"	"100.000"	"51.1338"	"15782"	"15782"	"15763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.5"	""	"91.1"	""	"104.4"	""	"167.3"	"4.6"	"179.3"	"176.2"	""	"639"	"28"	"35.000"	"28.000"	"0.0457584033817897"	"26"	"0.0001686"	"0.00123"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYFDQYPR"	"[K].qYFDQYPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"673.34015"	"1345.67302"	"1345.67382"	"-0.59"	"-0.00040"	"6/70"	"6"	"70"	"649261.768249512"	"HCD"	"MS2"	"40.27116"	"54.0"	"100.000"	"59.8014"	"19334"	"19334"	"19314"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.0"	""	"59.0"	""	"58.4"	""	"76.4"	"0.6"	"126.4"	"120.0"	""	"544"	"26"	"34.000"	"27.000"	"0.0637630237767019"	"17"	"0.001488"	"0.01284"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYFDQYPR"	"[K].qYFDQYPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.34033"	"1345.67339"	"1345.67382"	"-0.32"	"-0.00021"	"6/70"	"6"	"70"	"595624.629760742"	"HCD"	"MS2"	"31.96581"	"49.4"	"100.000"	"59.9810"	"19374"	"19374"	"19353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.4"	""	"55.4"	""	"65.2"	""	"74.1"	"0.5"	"106.7"	"113.7"	""	"543"	"26"	"34.000"	"27.000"	"0.0691464413576839"	"14"	"0.0001686"	"0.001333"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLYSDQMR"	"[K].fGLYSDQMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.34149"	"1345.67571"	"1345.67719"	"-1.10"	"-0.00074"	"5/70"	"5"	"70"	"302499.959899902"	"HCD"	"MS2"	"36.58048"	"25.5"	"100.000"	"81.4814"	"28123"	"28123"	"28093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"29.3"	""	"37.9"	""	"34.0"	"2.6"	"48.6"	"52.8"	""	"566"	"21"	"34.000"	"27.000"	"0.240872064811272"	"14"	"0.0001991"	"0.004441"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLYSDQMR"	"[K].fGLYSDQMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.34198"	"1345.67668"	"1345.67719"	"-0.37"	"-0.00025"	"9/70"	"9"	"70"	"333875.010986328"	"HCD"	"MS2"	"23.47657"	"24.8"	"100.000"	"81.4357"	"28077"	"28077"	"28058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.4"	""	"38.9"	""	"33.0"	""	"37.8"	""	"46.6"	"45.8"	""	"558"	"21"	"34.000"	"27.000"	"0.244683229099074"	"14"	"0.001316"	"0.01033"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HASGEGAMK"	"[K].hASGEGAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.24747"	"1345.72785"	"1345.72984"	"-1.48"	"-0.00066"	"7/68"	"7"	"68"	"6025379.0269165"	"HCD"	"MS2"	"26.39624"	"342.4"	"100.000"	"20.9935"	"3709"	"3709"	"3697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"494.3"	""	"464.8"	""	"477.6"	""	"537.8"	""	"634.8"	"637.6"	""	"819"	"40"	"36.000"	"29.000"	"0.0040761851840545"	"15"	"0"	"3.198E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HASGEGAMK"	"[K].hASGEGAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.24774"	"1345.72867"	"1345.72984"	"-0.87"	"-0.00039"	"7/68"	"7"	"68"	"6029959.18347168"	"HCD"	"MS2"	"23.50842"	"340.6"	"100.000"	"21.0285"	"3686"	"3686"	"3674"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"476.9"	""	"422.1"	""	"455.7"	""	"575.0"	""	"665.9"	"636.9"	""	"817"	"41"	"36.000"	"29.000"	"0.003007405993266"	"15"	"0"	"5.111E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HASGEGAMK"	"[K].hASGEGAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.36804"	"1345.72881"	"1345.72984"	"-0.77"	"-0.00052"	"12/68"	"12"	"68"	"413622.607788086"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"21.0004"	"3712"	"3712"	"3697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.0"	""	"51.4"	""	"49.3"	""	"27.6"	""	"49.8"	"57.9"	""	"817"	"26"	"36.000"	"29.000"	"0.114338386907064"	"14"	"9.9E-05"	"0.0007719"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HASGEGAMK"	"[K].hASGEGAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.36810"	"1345.72893"	"1345.72984"	"-0.68"	"-0.00046"	"6/68"	"6"	"68"	"297363.412780762"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"21.0675"	"3702"	"3702"	"3684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"22.9"	""	"30.0"	""	"26.9"	"0.6"	"33.5"	"38.9"	""	"817"	"17"	"36.000"	"29.000"	"0.818826823178668"	"14"	"0.008364"	"0.1071"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDFYSK"	"[R].vEDFYSk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"673.37323"	"1345.73918"	"1345.74039"	"-0.90"	"-0.00060"	"6/56"	"6"	"56"	"494926.69708252"	"HCD"	"MS2"	"32.58435"	"43.9"	"100.000"	"77.5208"	"26486"	"26486"	"26465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.4"	""	"47.9"	""	"45.6"	""	"77.2"	"3.9"	"99.4"	"83.4"	""	"890"	"33"	"36.000"	"29.000"	"0.0245674460479937"	"18"	"0.0001991"	"0.005892"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDLSAQQIR"	"[R].wDLSAQQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"673.37445"	"1345.74162"	"1345.74256"	"-0.70"	"-0.00047"	"6/74"	"6"	"74"	"186004.586242676"	"HCD"	"MS2"	"6.88052"	"16.7"	"100.000"	"84.6760"	"29385"	"29385"	"29363"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"22.0"	""	"25.2"	""	"26.2"	""	"26.5"	"31.4"	""	"879"	"22"	"36.000"	"29.000"	"0.269748401269927"	"25"	"0.001261"	"0.01026"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQPGTEK"	"[K].eVQPGTEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"673.38940"	"1345.77153"	"1345.77275"	"-0.91"	"-0.00061"	"3/78"	"3"	"78"	"217544.981506348"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"32.5042"	"8225"	"8225"	"8206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"18.0"	""	"18.0"	""	"37.3"	""	"39.8"	"37.8"	""	"804"	"10"	"36.000"	"29.000"	"4.33736582336391"	"16"	"0.009514"	"0.1261"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQPGTEK"	"[K].eVQPGTEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"Q9WTV1"	"Chitinase-3-like protein 1 OS=Rattus norvegicus OX=10116 GN=Chi3l1 PE=2 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"673.39026"	"1345.77324"	"1345.77275"	"0.36"	"0.00024"	"4/78"	"4"	"78"	"322841.143432617"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"32.4399"	"8235"	"8235"	"8216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"29.7"	""	"23.5"	""	"51.8"	""	"50.4"	"46.5"	""	"851"	"18"	"36.000"	"29.000"	"0.666652580331017"	"23"	"0.005426"	"0.06884"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDRPGSK"	"[R].eVDRPGSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.26575"	"1345.78269"	"1345.78398"	"-0.96"	"-0.00043"	"7/76"	"7"	"76"	"6807520.86688232"	"HCD"	"MS2"	"5.412143"	"461.3"	"100.000"	"24.0547"	"4887"	"4887"	"4866"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"682.5"	""	"549.1"	""	"572.4"	""	"765.0"	""	"921.3"	"888.0"	""	"860"	"11"	"36.000"	"29.000"	"3.31488491697705"	"13"	"0.003317"	"0.03669"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLELEK"	"[K].qQLELEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"673.40723"	"1345.80718"	"1345.80914"	"-1.46"	"-0.00098"	"12/64"	"12"	"64"	"1305323.75500488"	"HCD"	"MS2"	"29.88498"	"121.4"	"100.000"	"58.9499"	"18954"	"18954"	"18933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.7"	""	"124.5"	""	"120.9"	""	"278.9"	"1.9"	"253.9"	"208.3"	""	"720"	"33"	"35.000"	"28.000"	"0.0162668139974972"	""	"0.0009352"	"0.00807"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"673.40771"	"1345.80815"	"1345.80914"	"-0.73"	"-0.00049"	"8/74"	"8"	"74"	"1183065.76885986"	"HCD"	"MS2"	"37.14612"	"87.2"	"100.000"	"69.6994"	"23350"	"23350"	"23328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.5"	""	"102.3"	""	"107.2"	""	"155.6"	""	"177.2"	"174.1"	""	"716"	"57"	"35.000"	"28.000"	"6.94837144178215E-05"	"24"	"0"	"2.166E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIGEAAGK"	"[K].eLIGEAAGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"673.40771"	"1345.80815"	"1345.80914"	"-0.73"	"-0.00049"	"12/72"	"12"	"72"	"830279.277832031"	"HCD"	"MS2"	"48.74213"	"61.0"	"100.000"	"62.4772"	"20385"	"20385"	"20365"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.4"	""	"59.3"	""	"57.6"	""	"115.1"	"0.1"	"147.6"	"144.1"	""	"716"	"15"	"35.000"	"28.000"	"1.22428640419908"	"24"	"0.0009352"	"0.008347"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"673.40778"	"1345.80828"	"1345.80914"	"-0.64"	"-0.00043"	"8/74"	"8"	"74"	"628991.289916992"	"HCD"	"MS2"	"61.33655"	"49.7"	"100.000"	"69.5225"	"23244"	"23244"	"23225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"59.3"	""	"68.3"	""	"88.7"	""	"99.9"	"93.2"	""	"716"	"56"	"35.000"	"28.000"	"9.18085285073344E-05"	"27"	"0"	"5.685E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQLELEK"	"[K].qQLELEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"P02764"	"Alpha-1-acid glycoprotein OS=Rattus norvegicus OX=10116 GN=Orm1 PE=2 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"673.40778"	"1345.80828"	"1345.80914"	"-0.64"	"-0.00043"	"12/64"	"12"	"64"	"1249395.90826416"	"HCD"	"MS2"	"34.448"	"117.4"	"100.000"	"58.6759"	"18878"	"18878"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.3"	""	"124.8"	""	"122.8"	""	"272.1"	""	"235.7"	"208.5"	""	"716"	"34"	"35.000"	"28.000"	"0.0159912725990045"	""	"0.001217"	"0.009439"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEAILK"	"[R].eGQEAILk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"673.40790"	"1345.80852"	"1345.80914"	"-0.46"	"-0.00031"	"10/72"	"10"	"72"	"481108.697753906"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"51.9316"	"16136"	"16136"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.8"	""	"43.2"	""	"55.9"	""	"71.3"	"1.9"	"72.9"	"91.2"	""	"716"	"12"	"35.000"	"28.000"	"2.30082202799493"	"19"	"0.003001"	"0.03255"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIGEAAGK"	"[K].eLIGEAAGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"673.40790"	"1345.80852"	"1345.80914"	"-0.46"	"-0.00031"	"13/72"	"13"	"72"	"875833.110717773"	"HCD"	"MS2"	"10.14302"	"69.4"	"100.000"	"62.0862"	"20259"	"20259"	"20239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.1"	""	"90.8"	""	"90.4"	""	"103.7"	""	"137.1"	"125.9"	""	"716"	"45"	"35.000"	"28.000"	"0.00113470515176957"	""	"0"	"2.306E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LVEIDNGK"	"[R].lVEIDNGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"673.40796"	"1345.80864"	"1345.80914"	"-0.37"	"-0.00025"	"7/64"	"7"	"64"	"765745.458679199"	"HCD"	"MS2"	"7.893989"	"62.4"	"100.000"	"70.1541"	"23501"	"23501"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"70.0"	""	"63.0"	""	"98.8"	"0.6"	"133.1"	"157.4"	""	"716"	"27"	"35.000"	"28.000"	"0.0725910413588619"	"16"	"0.0001686"	"0.001042"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"673.40796"	"1345.80864"	"1345.80914"	"-0.37"	"-0.00025"	"8/74"	"8"	"74"	"765745.458679199"	"HCD"	"MS2"	"7.893989"	"62.4"	"100.000"	"70.1541"	"23501"	"23501"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"70.0"	""	"63.0"	""	"98.8"	"0.6"	"133.1"	"157.4"	""	"716"	"27"	"35.000"	"28.000"	"0.0753152681436398"	"16"	"0"	"0.0001324"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIGEAAGK"	"[K].eLIGEAAGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.6226"	"0.0000"	"1"	"1"	"1"	"673.40802"	"1345.80876"	"1345.80914"	"-0.28"	"-0.00019"	"14/72"	"14"	"72"	"920462.906555176"	"HCD"	"MS2"	"0"	"77.2"	"100.000"	"62.1752"	"20262"	"20262"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.6"	""	"94.5"	""	"99.3"	""	"125.7"	""	"149.4"	"151.4"	""	"726"	"53"	"35.000"	"28.000"	"0.00018361435230713"	""	"0"	"1.14E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEAILK"	"[R].eGQEAILk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"673.40802"	"1345.80876"	"1345.80914"	"-0.28"	"-0.00019"	"6/72"	"6"	"72"	"990819.718322754"	"HCD"	"MS2"	"13.40282"	"89.1"	"100.000"	"51.9866"	"16124"	"16124"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.2"	""	"104.7"	""	"113.4"	""	"154.7"	""	"168.4"	"172.8"	""	"726"	"32"	"35.000"	"28.000"	"0.0240938734555893"	"27"	"0.0005778"	"0.007102"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"673.40802"	"1345.80876"	"1345.80914"	"-0.28"	"-0.00019"	"8/74"	"8"	"74"	"2177650.02606201"	"HCD"	"MS2"	"14.39206"	"154.1"	"100.000"	"69.8038"	"23359"	"23359"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"212.1"	""	"175.9"	""	"175.8"	""	"289.6"	"0.6"	"315.2"	"292.7"	""	"726"	"60"	"35.000"	"28.000"	"3.80983901600793E-05"	"25"	"0"	"5.74E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDVIELK"	"[K].nGDVIELk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.0645"	"0.0000"	"1"	"1"	"1"	"673.40808"	"1345.80889"	"1345.80914"	"-0.19"	"-0.00013"	"6/76"	"6"	"76"	"516050.751708984"	"HCD"	"MS2"	"45.27414"	"43.4"	"100.000"	"72.0635"	"24304"	"24304"	"24282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.3"	""	"49.7"	""	"56.7"	""	"70.9"	""	"81.2"	"90.4"	""	"726"	"31"	"35.000"	"28.000"	"0.0300543005427577"	""	"0.001217"	"0.009436"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGDVIELK"	"[K].nGDVIELk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.3611"	"0.0000"	"1"	"1"	"1"	"673.40826"	"1345.80925"	"1345.80914"	"0.09"	"0.00006"	"12/76"	"12"	"76"	"407698.684997559"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"71.7939"	"24168"	"24168"	"24145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"47.6"	""	"49.8"	""	"50.8"	""	"59.3"	"70.7"	""	"719"	"36"	"35.000"	"28.000"	"0.00862380434387506"	""	"9.9E-05"	"0.0005439"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEAILK"	"[R].eGQEAILk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"673.40839"	"1345.80950"	"1345.80914"	"0.27"	"0.00018"	"6/72"	"6"	"72"	"1147190.7633667"	"HCD"	"MS2"	"18.80837"	"98.2"	"100.000"	"51.6117"	"16006"	"16006"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.2"	""	"109.4"	""	"128.6"	""	"178.5"	""	"184.2"	"192.9"	""	"719"	"32"	"35.000"	"28.000"	"0.0235341704577185"	"27"	"0.0001991"	"0.004339"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLAAVEAK"	"[K].aDLAAVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"673.40845"	"1345.80962"	"1345.80914"	"0.36"	"0.00024"	"14/74"	"14"	"74"	"2004373.48406982"	"HCD"	"MS2"	"8.046294"	"141.5"	"100.000"	"69.9874"	"23467"	"23467"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"177.2"	""	"153.5"	""	"174.6"	""	"240.1"	""	"294.6"	"304.1"	""	"739"	"51"	"35.000"	"28.000"	"0.000278364880799609"	"23"	"0"	"2.856E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDNGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"673.40851"	"1345.80974"	"1345.80914"	"0.45"	"0.00030"	"7/64"	"7"	"64"	"537421.957214355"	"HCD"	"MS2"	"4.645522"	"49.1"	"100.000"	"70.3058"	"23596"	"23596"	"23576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.9"	""	"46.7"	""	"51.1"	""	"79.6"	"0.7"	"106.3"	"125.6"	""	"739"	"29"	"35.000"	"28.000"	"0.0439151573037978"	""	"0.0001991"	"0.00245"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RMDLVLELK"	"[K].RMDLVLELk.[N]"	"K9(TMT6plex)"	"1"	"1"	"P29994"	"Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2"	"P29994"	"Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2"	"1"	"2"	"2"	"0.2903"	"0.0000"	"1"	"1"	"1"	"673.40924"	"1345.81120"	"1345.80747"	"2.77"	"0.00187"	"6/88"	"6"	"88"	"273293.306213379"	"HCD"	"MS2"	"42.63103"	"23.9"	"100.000"	"71.6787"	"24152"	"24152"	"24123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"37.2"	""	"33.5"	""	"34.7"	""	"36.9"	"48.9"	""	"712"	"31"	"35.000"	"28.000"	"0.0285397390566014"	""	"0.00329"	"0.03561"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQIGTVNDR"	"[R].tNQIGTVNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"673.86426"	"1346.72124"	"1346.72256"	"-0.98"	"-0.00066"	"9/104"	"9"	"104"	"356040.366577148"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"30.0654"	"7249"	"7249"	"7227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"30.2"	""	"32.6"	""	"32.4"	""	"39.5"	"36.2"	""	"951"	"47"	"36.000"	"29.000"	"0.000889509357743937"	""	"0"	"0.0002227"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNQIGTVNDR"	"[R].tNQIGTVNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"673.86462"	"1346.72197"	"1346.72256"	"-0.44"	"-0.00029"	"6/104"	"6"	"104"	"354580.900085449"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"29.9037"	"7224"	"7224"	"7203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.2"	""	"35.7"	""	"27.8"	""	"34.6"	""	"47.3"	"38.0"	""	"950"	"43"	"36.000"	"29.000"	"0.00253918070713562"	"29"	"9.9E-05"	"0.0005002"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"673.86633"	"1346.72539"	"1346.72658"	"-0.88"	"-0.00060"	"15/84"	"15"	"84"	"1058530.47229004"	"HCD"	"MS2"	"40.07936"	"65.8"	"100.000"	"68.3158"	"22754"	"22754"	"22732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.5"	""	"89.0"	""	"78.0"	""	"83.8"	""	"91.2"	"178.6"	""	"944"	"29"	"36.000"	"29.000"	"0.0642601890123928"	"25"	"0.0001686"	"0.001753"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"673.86682"	"1346.72637"	"1346.72658"	"-0.16"	"-0.00011"	"7/84"	"7"	"84"	"757152.72076416"	"HCD"	"MS2"	"11.13022"	"42.1"	"100.000"	"68.9624"	"23050"	"23050"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.5"	""	"54.8"	""	"50.6"	""	"47.9"	""	"46.9"	"134.8"	""	"961"	"41"	"36.000"	"29.000"	"0.00394178917050478"	"24"	"9.9E-05"	"0.0005186"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"673.86694"	"1346.72661"	"1346.72658"	"0.02"	"0.00001"	"10/84"	"10"	"84"	"2109569.11700439"	"HCD"	"MS2"	"4.229814"	"88.7"	"100.000"	"68.6198"	"22878"	"22878"	"22860"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.8"	""	"93.8"	""	"98.6"	""	"84.6"	""	"93.0"	"322.1"	""	"965"	"52"	"36.000"	"29.000"	"0.000324711236657184"	"27"	"0"	"4.231E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"673.86694"	"1346.72661"	"1346.72658"	"0.02"	"0.00001"	"7/84"	"7"	"84"	"2143855.9085083"	"HCD"	"MS2"	"3.776913"	"90.0"	"100.000"	"68.6584"	"22926"	"22926"	"22906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.1"	""	"95.5"	""	"108.4"	""	"84.6"	""	"93.6"	"325.9"	""	"965"	"44"	"36.000"	"29.000"	"0.00173579054212646"	"26"	"0"	"0.0002666"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"673.86725"	"1346.72722"	"1346.72658"	"0.48"	"0.00032"	"7/84"	"7"	"84"	"680275.782043457"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"68.9359"	"23005"	"23005"	"22986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"35.6"	""	"37.8"	""	"45.9"	"0.3"	"46.0"	"114.9"	""	"947"	"42"	"36.000"	"29.000"	"0.00284001074606984"	"24"	"9.9E-05"	"0.0004962"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAAFPGDVDR"	"[R].vAAAFPGDVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"673.86731"	"1346.72734"	"1346.72658"	"0.57"	"0.00038"	"4/84"	"4"	"84"	"831852.118896484"	"HCD"	"MS2"	"42.78008"	"55.6"	"100.000"	"68.3629"	"22806"	"22806"	"22778"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.3"	""	"69.6"	""	"70.9"	""	"73.6"	""	"79.6"	"145.6"	""	"951"	"12"	"36.000"	"29.000"	"3.23705830058874"	"19"	"0.001488"	"0.01217"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"THMQDLK"	"[R].tHmQDLk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K7(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"673.87848"	"1346.74968"	"1346.75024"	"-0.42"	"-0.00028"	"6/62"	"6"	"62"	"159853.953674316"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"23.7671"	"4770"	"4770"	"4740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"16.1"	""	"17.5"	""	"34.8"	""	"25.7"	"19.1"	""	"980"	"30"	"36.000"	"29.000"	"0.052625481204721"	"21"	"0.008364"	"0.1068"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"THMQNIK"	"[R].tHmQnIk.[D]"	"N-Term(TMT6plex); M3(Oxidation); N5(Deamidated); K7(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"673.87848"	"1346.74968"	"1346.75024"	"-0.42"	"-0.00028"	"6/54"	"6"	"54"	"159853.953674316"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"23.7671"	"4770"	"4770"	"4740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"16.1"	""	"17.5"	""	"34.8"	""	"25.7"	"19.1"	""	"980"	"30"	"36.000"	"29.000"	"0.052625481204721"	"21"	"0.008364"	"0.1068"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"673.89862"	"1346.78996"	"1346.79315"	"-2.37"	"-0.00159"	"7/64"	"7"	"64"	"1330349.74768066"	"HCD"	"MS2"	"83.91563"	"76.6"	"100.000"	"78.0222"	"26689"	"26689"	"26666"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.1"	""	"79.5"	""	"69.7"	""	"124.9"	""	"190.0"	"193.8"	""	"877"	"12"	"36.000"	"29.000"	"2.93068807853838"	"18"	"0.0001991"	"0.005008"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"673.89960"	"1346.79192"	"1346.79315"	"-0.92"	"-0.00062"	"7/64"	"7"	"64"	"735999.674377441"	"HCD"	"MS2"	"49.66937"	"43.7"	"100.000"	"76.2142"	"25960"	"25960"	"25936"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.7"	""	"31.0"	""	"34.8"	""	"84.6"	""	"112.5"	"129.8"	""	"865"	"33"	"36.000"	"29.000"	"0.0207484716535368"	"16"	"0.0001686"	"0.001349"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"673.89966"	"1346.79204"	"1346.79315"	"-0.83"	"-0.00056"	"9/64"	"9"	"64"	"649648.368469238"	"HCD"	"MS2"	"31.44591"	"55.0"	"100.000"	"78.4023"	"26844"	"26844"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"51.0"	""	"62.3"	""	"88.4"	"1.6"	"119.8"	"136.0"	""	"860"	"14"	"36.000"	"29.000"	"1.77610425855769"	"24"	"0.0001991"	"0.005981"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"673.89984"	"1346.79241"	"1346.79315"	"-0.55"	"-0.00037"	"12/64"	"12"	"64"	"900049.949829102"	"HCD"	"MS2"	"17.40234"	"70.5"	"100.000"	"76.5139"	"26082"	"26082"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"49.8"	""	"31.9"	""	"125.9"	""	"187.9"	"241.8"	""	"860"	"39"	"36.000"	"29.000"	"0.00577388933289282"	"22"	"0"	"0.0003085"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEELQQK"	"[K].lEELqQk.[V]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.1905"	"0.0000"	"1"	"1"	"5"	"673.90009"	"1346.79289"	"1346.79315"	"-0.19"	"-0.00013"	"6/54"	"6"	"54"	"288766.515563965"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"75.5471"	"25720"	"25720"	"25697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.6"	""	"32.8"	""	"47.6"	""	"37.5"	"0.4"	"51.4"	"44.1"	""	"890"	"21"	"36.000"	"29.000"	"0.358393406333585"	""	"0.001488"	"0.01274"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"673.90009"	"1346.79289"	"1346.79315"	"-0.19"	"-0.00013"	"12/64"	"12"	"64"	"1083176.40795898"	"HCD"	"MS2"	"0"	"86.4"	"100.000"	"76.5819"	"26141"	"26141"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.3"	""	"55.6"	""	"46.4"	""	"168.8"	"0.5"	"218.5"	"292.4"	""	"890"	"33"	"36.000"	"29.000"	"0.0208621955054643"	"21"	"0.0001686"	"0.001093"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEELQQK"	"[K].lEELqQk.[V]"	"N-Term(TMT6plex); Q5(Deamidated); K7(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"5"	"673.90015"	"1346.79302"	"1346.79315"	"-0.10"	"-0.00007"	"12/54"	"12"	"54"	"298184.187011719"	"HCD"	"MS2"	"15.21628"	"28.2"	"100.000"	"75.3938"	"25627"	"25627"	"25601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"32.1"	""	"40.3"	""	"41.5"	"0.6"	"54.5"	"48.6"	""	"890"	"22"	"36.000"	"29.000"	"0.30155047088675"	"27"	"0.0001991"	"0.0057"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"673.90027"	"1346.79326"	"1346.79315"	"0.08"	"0.00005"	"7/64"	"7"	"64"	"1151701.2166748"	"HCD"	"MS2"	"71.71028"	"66.7"	"100.000"	"78.0636"	"26733"	"26733"	"26713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.1"	""	"84.9"	""	"58.6"	""	"122.0"	""	"157.2"	"146.4"	""	"860"	"7"	"36.000"	"29.000"	"7.9701859806837"	"18"	"0.001488"	"0.01204"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEIDNGK"	"[R].lVEIDnGk.[Q]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"673.90033"	"1346.79338"	"1346.79315"	"0.17"	"0.00011"	"7/64"	"7"	"64"	"694500.435913086"	"HCD"	"MS2"	"53.53583"	"40.5"	"100.000"	"76.2542"	"26008"	"26008"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.6"	""	"31.7"	""	"29.0"	""	"73.9"	""	"107.3"	"117.3"	""	"859"	"22"	"36.000"	"29.000"	"0.246583020518047"	"18"	"0.0001991"	"0.002841"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"449.60577"	"1346.80277"	"1346.80439"	"-1.20"	"-0.00054"	"9/70"	"9"	"70"	"2165581.81420898"	"HCD"	"MS2"	"18.51798"	"101.3"	"100.000"	"53.2510"	"16674"	"16674"	"16657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.7"	""	"118.3"	""	"108.8"	""	"172.9"	""	"210.4"	"225.4"	""	"870"	"38"	"36.000"	"29.000"	"0.00686260902319216"	"25"	"0.0001991"	"0.004068"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"673.90515"	"1346.80303"	"1346.80439"	"-1.01"	"-0.00068"	"7/70"	"7"	"70"	"1292716.25073242"	"HCD"	"MS2"	"0"	"110.6"	"100.000"	"53.3060"	"16663"	"16663"	"16634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.5"	""	"138.6"	""	"123.0"	""	"189.2"	"1.2"	"206.7"	"237.9"	""	"870"	"46"	"36.000"	"29.000"	"0.00111812216550446"	"27"	"9.9E-05"	"0.0006399"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"673.90515"	"1346.80303"	"1346.80439"	"-1.01"	"-0.00068"	"12/70"	"12"	"70"	"20107104.348999"	"HCD"	"MS2"	"0"	"625.5"	"42.428"	"53.2764"	"16685"	"16685"	"16671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"770.5"	""	"689.1"	""	"697.5"	""	"1068.9"	""	"1255.4"	"1474.0"	""	"870"	"39"	"36.000"	"29.000"	"0.00586798853927369"	"25"	"0.0001991"	"0.003944"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"449.60587"	"1346.80304"	"1346.80439"	"-1.00"	"-0.00045"	"9/70"	"9"	"70"	"2111782.55688477"	"HCD"	"MS2"	"16.27147"	"97.4"	"100.000"	"53.6008"	"16783"	"16783"	"16761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.5"	""	"107.3"	""	"102.4"	""	"172.4"	""	"196.8"	"227.1"	""	"870"	"37"	"36.000"	"29.000"	"0.00949487511651706"	"24"	"0.0001991"	"0.00521"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"673.90527"	"1346.80327"	"1346.80439"	"-0.83"	"-0.00056"	"7/70"	"7"	"70"	"1882038.56744385"	"HCD"	"MS2"	"0"	"153.6"	"100.000"	"52.9978"	"16571"	"16571"	"16546"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.9"	""	"188.6"	""	"172.6"	""	"282.7"	"0.2"	"297.5"	"317.1"	""	"870"	"44"	"36.000"	"29.000"	"0.00162738105898343"	"27"	"0.0001686"	"0.001581"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNVLGEK"	"[R].tQNVLGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"673.90533"	"1346.80339"	"1346.80439"	"-0.74"	"-0.00050"	"7/80"	"7"	"80"	"3028252.84069824"	"HCD"	"MS2"	"0"	"215.0"	"100.000"	"47.3057"	"14261"	"14261"	"14241"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"328.0"	""	"302.2"	""	"301.0"	""	"366.5"	"4.1"	"382.0"	"351.3"	""	"870"	"48"	"36.000"	"29.000"	"0.000700630851302547"	"26"	"0.0001686"	"0.001366"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNVLGEK"	"[R].tQNVLGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"673.90546"	"1346.80364"	"1346.80439"	"-0.56"	"-0.00037"	"7/80"	"7"	"80"	"1407410.03631592"	"HCD"	"MS2"	"5.301633"	"99.3"	"100.000"	"47.5978"	"14380"	"14380"	"14363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.0"	""	"108.5"	""	"143.1"	""	"154.9"	""	"198.7"	"185.6"	""	"871"	"33"	"36.000"	"29.000"	"0.0230137907148091"	"23"	"0.0001686"	"0.001256"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"673.90546"	"1346.80364"	"1346.80439"	"-0.56"	"-0.00037"	"6/70"	"6"	"70"	"3920237.05438232"	"HCD"	"MS2"	"0"	"291.2"	"100.000"	"53.9021"	"16906"	"16906"	"16889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.5"	""	"225.9"	""	"240.1"	""	"489.3"	"0.7"	"773.6"	"792.8"	""	"871"	"31"	"36.000"	"29.000"	"0.0322098097287863"	""	"0.0001991"	"0.005464"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNVLGEK"	"[R].tQNVLGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"673.90552"	"1346.80376"	"1346.80439"	"-0.47"	"-0.00031"	"7/80"	"7"	"80"	"2971007.52203369"	"HCD"	"MS2"	"0"	"209.4"	"100.000"	"47.6115"	"14347"	"14347"	"14334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.7"	""	"285.2"	""	"295.1"	""	"357.2"	""	"378.1"	"346.5"	""	"871"	"46"	"36.000"	"29.000"	"0.00122176634932797"	"25"	"9.9E-05"	"0.0009141"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"673.90552"	"1346.80376"	"1346.80439"	"-0.47"	"-0.00031"	"7/70"	"7"	"70"	"17546582.0532227"	"HCD"	"MS2"	"0"	"708.8"	"56.090"	"53.5871"	"16778"	"16778"	"16761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"861.7"	""	"798.7"	""	"748.6"	""	"1252.7"	""	"1458.8"	"1626.1"	""	"871"	"43"	"36.000"	"29.000"	"0.00204638884297571"	"27"	"0.0001991"	"0.004357"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTANEVK"	"[K].vQTANEVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"673.90558"	"1346.80388"	"1346.80439"	"-0.38"	"-0.00025"	"7/74"	"7"	"74"	"750811.953857422"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"37.1161"	"10129"	"10129"	"10106"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.6"	""	"76.7"	""	"84.5"	""	"108.4"	"0.7"	"114.2"	"110.7"	""	"867"	"45"	"36.000"	"29.000"	"0.00143215196039459"	"26"	"0"	"0.0003619"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"673.90558"	"1346.80388"	"1346.80439"	"-0.38"	"-0.00025"	"6/70"	"6"	"70"	"3719375.49621582"	"HCD"	"MS2"	"0.6645654"	"292.3"	"100.000"	"53.5800"	"16808"	"16808"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.3"	""	"225.1"	""	"244.0"	""	"470.1"	"6.1"	"771.2"	"830.2"	""	"867"	"33"	"36.000"	"29.000"	"0.024098449552672"	""	"0.0001991"	"0.004535"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQNDLTk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"449.60617"	"1346.80396"	"1346.80439"	"-0.32"	"-0.00014"	"6/70"	"6"	"70"	"748329.393798828"	"HCD"	"MS2"	"17.86596"	"42.7"	"100.000"	"53.5547"	"16798"	"16798"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.4"	""	"43.8"	""	"42.6"	""	"71.0"	"0.6"	"98.7"	"105.8"	""	"878"	"19"	"36.000"	"29.000"	"0.518160759051109"	"20"	"0.004234"	"0.04894"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAENLQK"	"[R].vSAENLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"673.90582"	"1346.80437"	"1346.80439"	"-0.01"	"-0.00001"	"7/66"	"7"	"66"	"746113.217895508"	"HCD"	"MS2"	"13.83061"	"60.7"	"100.000"	"48.7636"	"14817"	"14817"	"14787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.5"	""	"71.5"	""	"84.0"	""	"93.7"	""	"113.0"	"130.2"	""	"878"	"26"	"36.000"	"29.000"	"0.101266201584811"	"21"	"0.0001686"	"0.001451"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQNVLGEK"	"[R].tQNVLGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"673.90601"	"1346.80474"	"1346.80439"	"0.26"	"0.00017"	"7/80"	"7"	"80"	"1053052.98803711"	"HCD"	"MS2"	"4.268289"	"82.3"	"100.000"	"47.9474"	"14484"	"14484"	"14465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.1"	""	"111.1"	""	"103.8"	""	"131.4"	""	"162.2"	"158.3"	""	"856"	"32"	"36.000"	"29.000"	"0.0254357043887466"	"21"	"0.0001686"	"0.001329"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTANEVK"	"[K].vQTANEVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"673.90607"	"1346.80486"	"1346.80439"	"0.35"	"0.00024"	"7/74"	"7"	"74"	"636538.735595703"	"HCD"	"MS2"	"0"	"54.2"	"100.000"	"37.4168"	"10251"	"10251"	"10229"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"73.1"	""	"79.2"	""	"79.0"	"0.6"	"107.1"	"102.1"	""	"858"	"16"	"36.000"	"29.000"	"1.16267221008117"	"21"	"0.0001991"	"0.002868"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTANEVK"	"[K].vQTANEVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"673.90613"	"1346.80498"	"1346.80439"	"0.44"	"0.00030"	"7/74"	"7"	"74"	"1009240.19018555"	"HCD"	"MS2"	"0"	"86.1"	"100.000"	"37.2442"	"10144"	"10144"	"10115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.9"	""	"109.9"	""	"114.7"	""	"146.5"	""	"161.8"	"154.4"	""	"858"	"43"	"36.000"	"29.000"	"0.00239032686291798"	""	"9.9E-05"	"0.0007022"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSAENLQK"	"[R].vSAENLQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"673.90717"	"1346.80705"	"1346.80439"	"1.98"	"0.00133"	"11/66"	"11"	"66"	"628680.44708252"	"HCD"	"MS2"	"16.81952"	"50.8"	"100.000"	"48.3782"	"14696"	"14696"	"14673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.0"	""	"61.3"	""	"64.2"	""	"88.4"	""	"93.4"	"103.1"	""	"831"	"29"	"36.000"	"29.000"	"0.0532808357093577"	"22"	"9.9E-05"	"0.0009688"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGVITK"	"[K].eLEGVITk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"673.91809"	"1346.82891"	"1346.82954"	"-0.47"	"-0.00032"	"14/68"	"14"	"68"	"1621746.97766113"	"HCD"	"MS2"	"26.49217"	"117.7"	"100.000"	"78.6582"	"26948"	"26948"	"26929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.7"	""	"165.0"	""	"159.3"	""	"186.2"	"0.4"	"209.3"	"213.7"	""	"832"	"37"	"36.000"	"29.000"	"0.00837709287942753"	"26"	"9.9E-05"	"0.0007941"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINSVDIK"	"[K].vInSVDIk.[Q]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"673.91840"	"1346.82952"	"1346.82954"	"-0.02"	"-0.00001"	"12/70"	"12"	"70"	"381303.971618652"	"HCD"	"MS2"	"25.41016"	"30.2"	"100.000"	"89.1338"	"31173"	"31173"	"31160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"36.1"	""	"41.5"	""	"49.9"	"1.4"	"62.4"	"55.8"	""	"852"	"39"	"36.000"	"29.000"	"0.0057201787344473"	""	"0.001217"	"0.009266"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEGVITK"	"[K].eLEGVITk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"673.91846"	"1346.82964"	"1346.82954"	"0.07"	"0.00005"	"12/68"	"12"	"68"	"1644271.12200928"	"HCD"	"MS2"	"25.32586"	"120.6"	"100.000"	"78.8448"	"27051"	"27051"	"27031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.0"	""	"155.9"	""	"160.4"	""	"195.7"	"1.6"	"215.9"	"213.5"	""	"823"	"41"	"36.000"	"29.000"	"0.00336023645814061"	"28"	"9.9E-05"	"0.0006315"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINSVDIK"	"[K].vInSVDIk.[Q]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"673.91876"	"1346.83025"	"1346.82954"	"0.53"	"0.00035"	"7/70"	"7"	"70"	"407668.548461914"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"89.0542"	"31180"	"31180"	"31165"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.3"	""	"36.8"	""	"41.9"	""	"51.0"	""	"61.1"	"46.2"	""	"827"	"48"	"36.000"	"29.000"	"0.000695785724252638"	"27"	"0.0001686"	"0.001925"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSYNTEWR"	"[K].ySYNTEWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"674.33008"	"1347.65288"	"1347.65308"	"-0.15"	"-0.00010"	"5/72"	"5"	"72"	"1170919.79205322"	"HCD"	"MS2"	"7.428285"	"80.5"	"100.000"	"58.4249"	"18740"	"18740"	"18718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.4"	""	"92.4"	""	"103.9"	""	"138.4"	"9.6"	"153.4"	"157.7"	""	"397"	"26"	"32.000"	"25.000"	"0.0492901921401171"	"16"	"0.001261"	"0.01007"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSYNTEWR"	"[K].ySYNTEWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"674.33026"	"1347.65325"	"1347.65308"	"0.12"	"0.00008"	"5/72"	"5"	"72"	"1238477.71185303"	"HCD"	"MS2"	"12.24552"	"88.7"	"100.000"	"58.1762"	"18674"	"18674"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.9"	""	"113.0"	""	"113.6"	""	"155.3"	"4.9"	"166.8"	"181.4"	""	"398"	"28"	"32.000"	"25.000"	"0.0327984315913577"	"15"	"0.0001991"	"0.002165"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPEVFQR"	"[K].dLDPEVFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"674.35773"	"1347.70818"	"1347.71060"	"-1.79"	"-0.00121"	"5/74"	"5"	"74"	"275401.761779785"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"82.9483"	"28686"	"28686"	"28661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.7"	""	"15.6"	""	"26.0"	""	"32.4"	""	"38.2"	"46.1"	""	"875"	"22"	"36.000"	"29.000"	"0.262408595861785"	"25"	"0.006267"	"0.07683"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLDPEVFQR"	"[K].dLDPEVFQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"674.35931"	"1347.71135"	"1347.71060"	"0.56"	"0.00038"	"4/74"	"4"	"74"	"282075.390014648"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"83.0145"	"28741"	"28741"	"28720"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"21.3"	""	"22.9"	""	"28.9"	""	"32.6"	"48.1"	""	"900"	"22"	"36.000"	"29.000"	"0.317111881035216"	""	"0.001951"	"0.01683"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTLSDDLER"	"[K].gLTLSDDLER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"674.36835"	"1347.72942"	"1347.73173"	"-1.71"	"-0.00115"	"7/84"	"7"	"84"	"1172386.06512451"	"HCD"	"MS2"	"50.91209"	"76.4"	"100.000"	"78.5819"	"26944"	"26944"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.6"	""	"93.7"	""	"104.6"	""	"118.6"	""	"148.2"	"147.1"	""	"928"	"30"	"36.000"	"29.000"	"0.0484750181718451"	"22"	"0"	"7.952E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLTLSDDLER"	"[K].gLTLSDDLER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"674.36902"	"1347.73076"	"1347.73173"	"-0.72"	"-0.00048"	"7/84"	"7"	"84"	"1250012.08618164"	"HCD"	"MS2"	"38.66814"	"82.0"	"100.000"	"78.4693"	"26871"	"26871"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.6"	""	"99.3"	""	"103.3"	""	"136.5"	""	"162.0"	"159.6"	""	"937"	"39"	"36.000"	"29.000"	"0.00528092008218227"	"23"	"0"	"1.869E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGGLEMELR"	"[R].tLGGLEMELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"674.37878"	"1347.75029"	"1347.75035"	"-0.05"	"-0.00003"	"7/86"	"7"	"86"	"685527.919677734"	"HCD"	"MS2"	"17.10785"	"40.9"	"100.000"	"101.1054"	"36040"	"36040"	"36023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.3"	""	"50.8"	""	"62.6"	""	"36.3"	"0.5"	"99.3"	"63.7"	""	"942"	"55"	"36.000"	"29.000"	"0.000144218477726831"	"28"	"0"	"1.317E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGGLEMELR"	"[R].tLGGLEMELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"674.37885"	"1347.75041"	"1347.75035"	"0.05"	"0.00003"	"7/86"	"7"	"86"	"791991.344360352"	"HCD"	"MS2"	"13.50642"	"46.0"	"100.000"	"100.9748"	"35961"	"35961"	"35946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.1"	""	"65.4"	""	"67.5"	""	"50.3"	"1.3"	"111.5"	"71.2"	""	"942"	"59"	"36.000"	"29.000"	"6.02588594258194E-05"	""	"0"	"1.728E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEVAEGK"	"[K].aADEVAEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.4889"	"0.0000"	"1"	"1"	"1"	"674.37946"	"1347.75163"	"1347.75202"	"-0.28"	"-0.00019"	"13/72"	"13"	"72"	"929415.931091309"	"HCD"	"MS2"	"0"	"73.0"	"100.000"	"37.9235"	"10419"	"10419"	"10394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.1"	""	"87.2"	""	"92.3"	""	"125.0"	""	"129.1"	"133.3"	""	"946"	"45"	"36.000"	"29.000"	"0.00165524064004413"	""	"0"	"6.741E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEVAEGK"	"[K].aADEVAEGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.3673"	"0.0000"	"1"	"1"	"1"	"674.37946"	"1347.75163"	"1347.75202"	"-0.28"	"-0.00019"	"8/72"	"8"	"72"	"880592.511352539"	"HCD"	"MS2"	"0"	"73.2"	"100.000"	"37.8084"	"10408"	"10408"	"10378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.9"	""	"85.8"	""	"95.7"	""	"121.3"	"0.7"	"132.8"	"133.8"	""	"946"	"49"	"36.000"	"29.000"	"0.00056998199979586"	""	"0"	"9.485E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHTDFEK"	"[K].iHTDFEk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"A0JPJ7"	"Obg-like ATPase 1 OS=Rattus norvegicus OX=10116 GN=Ola1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"449.92709"	"1347.76673"	"1347.76727"	"-0.40"	"-0.00018"	"5/54"	"5"	"54"	"3637164.84661865"	"HCD"	"MS2"	"46.89146"	"131.3"	"100.000"	"47.3907"	"14295"	"14295"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.3"	""	"182.2"	""	"184.4"	""	"199.3"	""	"238.8"	"230.1"	""	"865"	"18"	"36.000"	"29.000"	"0.651607556125766"	"14"	"0.002189"	"0.0207"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AATEALGEK"	"[K].aATEALGEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"674.39563"	"1347.78398"	"1347.78840"	"-3.28"	"-0.00221"	"5/74"	"5"	"74"	"586674.91973877"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"46.7893"	"14014"	"14014"	"13991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"53.3"	""	"58.9"	""	"82.4"	"2.0"	"84.8"	"90.5"	""	"954"	"4"	"36.000"	"29.000"	"19.2096025373244"	"17"	"0.005266"	"0.06759"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATEALGEK"	"[K].aATEALGEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"674.39618"	"1347.78508"	"1347.78840"	"-2.46"	"-0.00166"	"8/74"	"8"	"74"	"807166.170715332"	"HCD"	"MS2"	"100"	"73.8"	"100.000"	"46.1395"	"13791"	"13791"	"13774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.0"	""	"108.6"	""	"102.9"	""	"105.8"	"0.2"	"137.0"	"135.0"	""	"952"	"40"	"36.000"	"29.000"	"0.0048262181961066"	"29"	"0"	"0.0002391"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATEALGEK"	"[K].aATEALGEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.3171"	"0.0000"	"1"	"1"	"1"	"674.39624"	"1347.78520"	"1347.78840"	"-2.37"	"-0.00160"	"13/74"	"13"	"74"	"974253.866638184"	"HCD"	"MS2"	"0"	"82.1"	"100.000"	"46.4328"	"13874"	"13874"	"13862"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.3"	""	"119.2"	""	"111.2"	""	"106.8"	""	"154.7"	"161.5"	""	"931"	"41"	"36.000"	"29.000"	"0.00341916205627137"	""	"0"	"0.0001659"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILSADDK"	"[K].qILSADDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"674.39679"	"1347.78630"	"1347.78840"	"-1.56"	"-0.00105"	"10/76"	"10"	"76"	"1257139.37750244"	"HCD"	"MS2"	"9.69435"	"110.8"	"100.000"	"54.2383"	"17043"	"17043"	"17021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.1"	""	"91.1"	""	"120.6"	""	"221.8"	""	"258.3"	"236.4"	""	"933"	"12"	"36.000"	"29.000"	"3.21256296244605"	"22"	"0.001049"	"0.008744"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSVEEAK"	"[R].qVSVEEAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"674.39703"	"1347.78679"	"1347.78840"	"-1.20"	"-0.00081"	"14/76"	"14"	"76"	"1436934.17010498"	"HCD"	"MS2"	"0"	"115.4"	"100.000"	"42.3800"	"12225"	"12225"	"12200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.8"	""	"126.2"	""	"132.7"	""	"199.5"	""	"236.0"	"266.1"	""	"933"	"49"	"36.000"	"29.000"	"0.000646921594168736"	"25"	"0.0001686"	"0.001057"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAESVDAK"	"[K].vAAESVDAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"674.39709"	"1347.78691"	"1347.78840"	"-1.10"	"-0.00074"	"12/70"	"12"	"70"	"1303501.23114014"	"HCD"	"MS2"	"9.667071"	"104.5"	"100.000"	"43.3503"	"12621"	"12621"	"12594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.4"	""	"145.4"	""	"156.7"	""	"149.3"	""	"182.9"	"192.9"	""	"933"	"26"	"36.000"	"29.000"	"0.128189262242227"	"19"	"9.9E-05"	"0.0004892"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAESVDAK"	"[K].vAAESVDAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"674.39728"	"1347.78728"	"1347.78840"	"-0.83"	"-0.00056"	"14/70"	"14"	"70"	"1457504.46636963"	"HCD"	"MS2"	"44.11361"	"104.4"	"100.000"	"43.2425"	"12611"	"12611"	"12587"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.8"	""	"150.7"	""	"147.4"	""	"142.6"	""	"179.3"	"205.2"	""	"933"	"32"	"36.000"	"29.000"	"0.0323483138506729"	"20"	"0"	"0.0003882"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQnDLTk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"674.39734"	"1347.78740"	"1347.78840"	"-0.74"	"-0.00050"	"14/70"	"14"	"70"	"785907.835266113"	"HCD"	"MS2"	"47.28188"	"86.9"	"100.000"	"60.1746"	"19486"	"19486"	"19461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.6"	""	"91.9"	""	"95.5"	""	"144.0"	""	"158.1"	"179.7"	""	"930"	"33"	"36.000"	"29.000"	"0.0260287284695226"	""	"0.0001686"	"0.001341"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QILSADDK"	"[K].qILSADDk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"674.39740"	"1347.78752"	"1347.78840"	"-0.65"	"-0.00044"	"8/76"	"8"	"76"	"977959.555236816"	"HCD"	"MS2"	"38.68777"	"84.5"	"100.000"	"54.2266"	"17072"	"17072"	"17047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.9"	""	"103.9"	""	"96.9"	""	"131.7"	""	"184.3"	"179.5"	""	"930"	"13"	"36.000"	"29.000"	"2.09147632525379"	"23"	"0.005152"	"0.06581"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQDADLK"	"[K].iSQDADLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"674.39746"	"1347.78765"	"1347.78840"	"-0.56"	"-0.00038"	"6/74"	"6"	"74"	"1024423.32769775"	"HCD"	"MS2"	"42.25362"	"98.3"	"100.000"	"54.6843"	"17225"	"17225"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.9"	""	"103.8"	""	"118.2"	""	"159.8"	"0.5"	"199.3"	"213.0"	""	"930"	"28"	"36.000"	"29.000"	"0.0798827400028279"	""	"0.0001991"	"0.00264"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSVEEAK"	"[R].qVSVEEAk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"674.39777"	"1347.78826"	"1347.78840"	"-0.11"	"-0.00007"	"14/76"	"14"	"76"	"1419973.93682861"	"HCD"	"MS2"	"0"	"122.9"	"100.000"	"42.2234"	"12195"	"12195"	"12172"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.4"	""	"140.5"	""	"128.5"	""	"203.4"	"0.4"	"270.4"	"262.1"	""	"955"	"46"	"36.000"	"29.000"	"0.00117482553098049"	"26"	"9.9E-05"	"0.0009066"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISQDADLK"	"[K].iSQDADLk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.1923"	"0.0000"	"1"	"1"	"1"	"674.39783"	"1347.78838"	"1347.78840"	"-0.02"	"-0.00001"	"6/74"	"6"	"74"	"978095.563415527"	"HCD"	"MS2"	"0"	"95.7"	"100.000"	"54.5325"	"17197"	"17197"	"17173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.3"	""	"104.2"	""	"121.8"	""	"157.6"	"1.5"	"192.1"	"203.1"	""	"955"	"26"	"36.000"	"29.000"	"0.125018238642457"	""	"0.0001686"	"0.001927"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQNDLTK"	"[K].gIQnDLTk.[L]"	"N-Term(TMT6plex); N4(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"674.39795"	"1347.78862"	"1347.78840"	"0.16"	"0.00011"	"11/70"	"11"	"70"	"832127.809204102"	"HCD"	"MS2"	"44.0288"	"83.9"	"100.000"	"60.3127"	"19509"	"19509"	"19480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.9"	""	"100.4"	""	"93.5"	""	"135.7"	""	"164.1"	"187.6"	""	"934"	"32"	"36.000"	"29.000"	"0.0300827046995588"	""	"9.9E-05"	"0.001009"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"674.41412"	"1347.82097"	"1347.82479"	"-2.83"	"-0.00191"	"7/64"	"7"	"64"	"1415205.44287109"	"HCD"	"MS2"	"32.31666"	"121.6"	"100.000"	"55.9135"	"17725"	"17725"	"17709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.2"	""	"149.0"	""	"157.0"	""	"209.6"	"2.0"	"228.9"	"231.7"	""	"875"	"39"	"36.000"	"29.000"	"0.00512835472427307"	"24"	"9.9E-05"	"0.0008725"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"674.41479"	"1347.82231"	"1347.82479"	"-1.84"	"-0.00124"	"7/64"	"7"	"64"	"918192.325012207"	"HCD"	"MS2"	"13.94796"	"79.5"	"100.000"	"57.1479"	"18254"	"18254"	"18231"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.3"	""	"92.0"	""	"102.8"	""	"133.9"	"0.1"	"153.2"	"168.2"	""	"825"	"42"	"36.000"	"29.000"	"0.00291355991133472"	"23"	"9.9E-05"	"0.0005799"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAALEAK"	"[K].sTVAALEAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"449.94562"	"1347.82230"	"1347.82479"	"-1.85"	"-0.00083"	"9/76"	"9"	"76"	"291853.751220703"	"HCD"	"MS2"	"9.519812"	"17.5"	"100.000"	"63.1019"	"20672"	"20672"	"20646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"17.9"	""	"23.0"	""	"35.5"	"0.8"	"41.1"	"30.9"	""	"825"	"18"	"36.000"	"29.000"	"0.588063132360902"	"21"	"0.0001991"	"0.005025"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"674.41504"	"1347.82280"	"1347.82479"	"-1.47"	"-0.00099"	"14/64"	"14"	"64"	"2524051.58551025"	"HCD"	"MS2"	"0"	"193.4"	"100.000"	"55.8889"	"17746"	"17746"	"17731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.3"	""	"228.8"	""	"257.2"	""	"322.6"	""	"400.9"	"367.5"	""	"825"	"31"	"36.000"	"29.000"	"0.0317997680989077"	"20"	"0.0001991"	"0.004135"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"674.41522"	"1347.82317"	"1347.82479"	"-1.20"	"-0.00081"	"7/64"	"7"	"64"	"2372227.91973877"	"HCD"	"MS2"	"7.24958"	"166.6"	"100.000"	"56.8355"	"18127"	"18127"	"18109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"251.5"	""	"194.8"	""	"209.3"	""	"275.4"	""	"318.1"	"332.5"	""	"825"	"40"	"36.000"	"29.000"	"0.0041823844661638"	""	"0.0001686"	"0.001959"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"674.41528"	"1347.82329"	"1347.82479"	"-1.11"	"-0.00075"	"14/64"	"14"	"64"	"3508941.27392578"	"HCD"	"MS2"	"3.914484"	"238.1"	"100.000"	"56.4710"	"17980"	"17980"	"17968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"351.5"	""	"273.4"	""	"324.7"	""	"411.5"	""	"435.6"	"460.4"	""	"825"	"41"	"36.000"	"29.000"	"0.00298142543985895"	"28"	"0.0001686"	"0.001118"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAALEAK"	"[K].sTVAALEAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"674.41534"	"1347.82341"	"1347.82479"	"-1.02"	"-0.00069"	"8/76"	"8"	"76"	"561874.36517334"	"HCD"	"MS2"	"19.0563"	"47.9"	"100.000"	"62.9768"	"20589"	"20589"	"20561"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"33.1"	""	"32.8"	""	"109.9"	""	"147.8"	"104.1"	""	"825"	"56"	"36.000"	"29.000"	"9.36319251402076E-05"	"25"	"0"	"1.931E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"674.41534"	"1347.82341"	"1347.82479"	"-1.02"	"-0.00069"	"7/64"	"7"	"64"	"3721698.31341553"	"HCD"	"MS2"	"2.731107"	"258.1"	"100.000"	"56.7451"	"18055"	"18055"	"18043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"371.3"	""	"295.6"	""	"351.8"	""	"438.8"	"3.3"	"482.8"	"502.6"	""	"825"	"45"	"36.000"	"29.000"	"0.00117064159923214"	""	"0.0001686"	"0.001859"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"674.41541"	"1347.82353"	"1347.82479"	"-0.93"	"-0.00063"	"14/64"	"14"	"64"	"2792137.41992188"	"HCD"	"MS2"	"0"	"197.9"	"100.000"	"57.0339"	"18173"	"18173"	"18156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.8"	""	"226.4"	""	"251.2"	""	"324.6"	"0.3"	"370.9"	"402.3"	""	"825"	"47"	"36.000"	"29.000"	"0.000819264153409914"	"29"	"9.9E-05"	"0.0005702"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"674.41547"	"1347.82366"	"1347.82479"	"-0.84"	"-0.00057"	"7/64"	"7"	"64"	"1361390.13305664"	"HCD"	"MS2"	"17.57122"	"101.7"	"100.000"	"57.3232"	"18290"	"18290"	"18280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.6"	""	"104.0"	""	"137.8"	""	"179.5"	""	"187.6"	"207.1"	""	"825"	"41"	"36.000"	"29.000"	"0.00310044443782509"	""	"0.0001686"	"0.001157"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"674.41547"	"1347.82366"	"1347.82479"	"-0.84"	"-0.00057"	"14/64"	"14"	"64"	"2930408.3470459"	"HCD"	"MS2"	"6.315001"	"215.9"	"100.000"	"56.1885"	"17834"	"17834"	"17822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.7"	""	"249.7"	""	"263.5"	""	"389.6"	"1.6"	"403.9"	"405.2"	""	"825"	"45"	"36.000"	"29.000"	"0.00139773214407421"	""	"0.0001686"	"0.001513"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAALEAK"	"[K].sTVAALEAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.4242"	"0.0000"	"1"	"1"	"1"	"449.94608"	"1347.82367"	"1347.82479"	"-0.83"	"-0.00037"	"10/76"	"10"	"76"	"641670.12487793"	"HCD"	"MS2"	"43.40561"	"30.8"	"100.000"	"62.9308"	"20570"	"20570"	"20545"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"24.0"	""	"27.9"	""	"76.0"	""	"77.8"	"69.0"	""	"825"	"33"	"36.000"	"29.000"	"0.0203903158382069"	""	"9.9E-05"	"0.0004345"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"674.41553"	"1347.82378"	"1347.82479"	"-0.75"	"-0.00050"	"14/64"	"14"	"64"	"3796092.32897949"	"HCD"	"MS2"	"0"	"259.6"	"100.000"	"56.1731"	"17860"	"17860"	"17847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"383.6"	""	"297.6"	""	"335.5"	""	"452.0"	""	"487.1"	"506.1"	""	"824"	"47"	"36.000"	"29.000"	"0.000870757484412699"	""	"0.0001686"	"0.00149"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"674.41565"	"1347.82402"	"1347.82479"	"-0.57"	"-0.00038"	"10/64"	"10"	"64"	"1946571.79833984"	"HCD"	"MS2"	"63.05412"	"167.7"	"100.000"	"55.6002"	"17632"	"17632"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.4"	""	"192.4"	""	"217.6"	""	"261.8"	""	"340.3"	"323.0"	""	"824"	"20"	"36.000"	"29.000"	"0.373161831570059"	"17"	"0.0001991"	"0.003256"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.7021"	"0.0000"	"1"	"1"	"1"	"674.41589"	"1347.82451"	"1347.82479"	"-0.21"	"-0.00014"	"14/64"	"14"	"64"	"3615610.02246094"	"HCD"	"MS2"	"0"	"254.9"	"100.000"	"56.4632"	"17943"	"17943"	"17931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"385.4"	""	"300.0"	""	"318.0"	""	"456.4"	""	"456.3"	"500.2"	""	"830"	"47"	"36.000"	"29.000"	"0.000879119871128128"	""	"9.9E-05"	"0.0006828"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAALEAK"	"[K].sTVAALEAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"674.41595"	"1347.82463"	"1347.82479"	"-0.11"	"-0.00008"	"8/76"	"8"	"76"	"517772.311279297"	"HCD"	"MS2"	"23.53636"	"44.4"	"100.000"	"62.9337"	"20604"	"20604"	"20576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"27.9"	""	"34.7"	""	"111.1"	""	"125.7"	"97.0"	""	"830"	"59"	"36.000"	"29.000"	"5.47076546500909E-05"	"29"	"0"	"1.223E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVAALEAK"	"[K].sTVAALEAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.5161"	"0.0000"	"1"	"1"	"1"	"449.94647"	"1347.82486"	"1347.82479"	"0.06"	"0.00003"	"10/76"	"10"	"76"	"677231.078796387"	"HCD"	"MS2"	"21.08867"	"33.7"	"100.000"	"62.7909"	"20546"	"20546"	"20526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"34.0"	""	"26.5"	""	"81.0"	""	"86.6"	"74.9"	""	"830"	"31"	"36.000"	"29.000"	"0.0340445890896875"	"29"	"0"	"0.0003273"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.4242"	"0.0000"	"1"	"1"	"1"	"449.94693"	"1347.82624"	"1347.82479"	"1.08"	"0.00048"	"6/64"	"6"	"64"	"1718079.60925293"	"HCD"	"MS2"	"12.92893"	"66.5"	"100.000"	"56.8186"	"18085"	"18085"	"18069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.8"	""	"83.1"	""	"90.8"	""	"113.7"	"2.0"	"129.7"	"116.6"	""	"793"	"33"	"35.000"	"28.000"	"0.021539875643675"	""	"0.0007633"	"0.007443"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"449.94708"	"1347.82669"	"1347.82479"	"1.42"	"0.00064"	"6/64"	"6"	"64"	"1900281.02264404"	"HCD"	"MS2"	"60.20194"	"69.4"	"100.000"	"56.5123"	"17997"	"17997"	"17978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.5"	""	"75.9"	""	"87.0"	""	"121.9"	""	"135.4"	"137.1"	""	"672"	"27"	"35.000"	"28.000"	"0.0730027596098218"	""	"0.001261"	"0.009865"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSSIEQK"	"[R].vVSSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"1"	"449.94717"	"1347.82697"	"1347.82479"	"1.62"	"0.00073"	"6/64"	"6"	"64"	"1010055.51794434"	"HCD"	"MS2"	"55.55243"	"46.8"	"100.000"	"56.8194"	"18121"	"18121"	"18101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.0"	""	"56.6"	""	"67.5"	""	"80.4"	""	"86.4"	"98.1"	""	"672"	"34"	"35.000"	"28.000"	"0.0121154424055272"	""	"0.0001991"	"0.002583"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNNAGLNSEK"	"[-].mNNAGLNSEk.[V]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"P70645"	"Bleomycin hydrolase OS=Rattus norvegicus OX=10116 GN=Blmh PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"674.83893"	"1348.67058"	"1348.67283"	"-1.67"	"-0.00113"	"6/90"	"6"	"90"	"464069.963684082"	"HCD"	"MS2"	"21.20685"	"39.0"	"100.000"	"55.3804"	"17509"	"17509"	"17480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.7"	""	"54.0"	""	"45.1"	""	"62.8"	""	"79.9"	"79.7"	""	"558"	"38"	"34.000"	"27.000"	"0.00470548294083459"	"17"	"9.9E-05"	"0.0006891"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"674.85632"	"1348.70537"	"1348.70585"	"-0.35"	"-0.00024"	"7/98"	"7"	"98"	"590360.844787598"	"HCD"	"MS2"	"32.9536"	"49.3"	"100.000"	"57.8036"	"18522"	"18522"	"18498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.6"	""	"59.2"	""	"55.8"	""	"90.4"	"1.6"	"94.4"	"104.5"	""	"728"	"30"	"35.000"	"28.000"	"0.0364839106660355"	"18"	"9.9E-05"	"0.0004015"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"674.85681"	"1348.70635"	"1348.70585"	"0.37"	"0.00025"	"7/98"	"7"	"98"	"652212.366516113"	"HCD"	"MS2"	"45.12466"	"53.2"	"100.000"	"58.1328"	"18621"	"18621"	"18594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.2"	""	"52.4"	""	"60.0"	""	"94.3"	""	"117.8"	"109.9"	""	"738"	"41"	"35.000"	"28.000"	"0.00286435186035987"	"19"	"0"	"0.0001158"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFQGISPER"	"[K].aDFQGISPER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"P61805"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 OS=Rattus norvegicus OX=10116 GN=Dad1 PE=3 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"674.85706"	"1348.70683"	"1348.70585"	"0.73"	"0.00049"	"7/98"	"7"	"98"	"1192357.87890625"	"HCD"	"MS2"	"31.69462"	"83.8"	"100.000"	"58.0982"	"18642"	"18642"	"18622"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.3"	""	"88.7"	""	"96.9"	""	"160.4"	""	"171.6"	"178.7"	""	"741"	"38"	"35.000"	"28.000"	"0.00654317012564224"	"17"	"0"	"0.0001656"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFAYPDTHR"	"[R].lFAYPDTHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"450.24411"	"1348.71778"	"1348.72110"	"-2.46"	"-0.00111"	"8/66"	"8"	"66"	"666200.052001953"	"HCD"	"MS2"	"42.77427"	"24.6"	"100.000"	"59.3709"	"19126"	"19126"	"19098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.5"	"2.0"	"34.7"	""	"29.2"	""	"45.4"	"1.5"	"44.4"	"44.7"	""	"791"	"18"	"35.000"	"28.000"	"0.619650048227773"	"14"	"0.001261"	"0.009797"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFAYPDTHR"	"[R].lFAYPDTHR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"450.24484"	"1348.71997"	"1348.72110"	"-0.84"	"-0.00038"	"7/66"	"7"	"66"	"506182.925598145"	"HCD"	"MS2"	"39.75362"	"18.0"	"100.000"	"59.2189"	"19099"	"19099"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.9"	""	"30.4"	""	"24.1"	""	"26.9"	""	"34.4"	"32.4"	""	"825"	"15"	"36.000"	"29.000"	"1.26888993608054"	"18"	"0.001049"	"0.008904"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGAEQAEK"	"[K].sAGAEQAEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"674.87567"	"1348.74407"	"1348.74727"	"-2.37"	"-0.00160"	"14/84"	"14"	"84"	"736165.809265137"	"HCD"	"MS2"	"0"	"61.1"	"100.000"	"24.7589"	"5175"	"5175"	"5149"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.4"	""	"53.0"	""	"52.7"	""	"122.9"	"1.2"	"139.0"	"147.3"	""	"943"	"52"	"36.000"	"29.000"	"0.000280208752787243"	"26"	"0"	"4.725E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAGAEQAEK"	"[K].sAGAEQAEk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"674.87683"	"1348.74639"	"1348.74727"	"-0.65"	"-0.00044"	"13/84"	"13"	"84"	"691567.241943359"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"24.9131"	"5200"	"5200"	"5177"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.4"	""	"52.2"	""	"56.4"	""	"107.6"	"0.3"	"126.5"	"142.8"	""	"1009"	"47"	"37.000"	"30.000"	"0.00112424553280687"	"26"	"0"	"7.683E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNMGLVK"	"[R].dNNMGLVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"674.88593"	"1348.76457"	"1348.76589"	"-0.98"	"-0.00066"	"7/68"	"7"	"68"	"2146370.47253418"	"HCD"	"MS2"	"40.98538"	"177.6"	"100.000"	"55.9638"	"17745"	"17745"	"17730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"257.3"	""	"218.0"	""	"239.1"	""	"269.1"	""	"354.0"	"351.2"	""	"1028"	"13"	"37.000"	"30.000"	"2.71620859412443"	"17"	"0.001488"	"0.0123"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLDAVEK"	"[K].qSLDAVEk.[A]"	"N-Term(TMT6plex); Q1(Deamidated); K8(TMT6plex)"	"1"	"1"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"P32198"	"Carnitine O-palmitoyltransferase 1, liver isoform OS=Rattus norvegicus OX=10116 GN=Cpt1a PE=1 SV=2"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"3"	"674.88934"	"1348.77141"	"1348.77242"	"-0.75"	"-0.00050"	"6/80"	"6"	"80"	"1289638.3135376"	"HCD"	"MS2"	"0"	"107.2"	"100.000"	"64.7122"	"21326"	"21326"	"21307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.8"	""	"116.6"	""	"124.1"	""	"179.1"	""	"211.3"	"228.6"	""	"1007"	"19"	"37.000"	"30.000"	"0.566238604392347"	"26"	"0.004213"	"0.04608"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTLVSGGGK"	"[R].dGTLVSGGGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"674.89496"	"1348.78264"	"1348.78365"	"-0.75"	"-0.00051"	"15/82"	"15"	"82"	"1872505.91351318"	"HCD"	"MS2"	"7.070391"	"149.7"	"100.000"	"42.9249"	"12447"	"12447"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.8"	""	"201.3"	""	"197.8"	""	"240.4"	""	"256.9"	"291.8"	""	"897"	"44"	"36.000"	"29.000"	"0.00172489414247341"	"21"	"0"	"1.812E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGTLVSGGGK"	"[R].dGTLVSGGGk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"674.89502"	"1348.78276"	"1348.78365"	"-0.66"	"-0.00044"	"9/82"	"9"	"82"	"1923372.20465088"	"HCD"	"MS2"	"6.72879"	"142.2"	"100.000"	"42.7661"	"12416"	"12416"	"12398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.8"	""	"171.3"	""	"190.2"	""	"240.0"	""	"275.7"	"266.8"	""	"899"	"52"	"36.000"	"29.000"	"0.000310978021428062"	"23"	"0"	"1.182E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEEFFTYR"	"[R].eEEFFTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"675.33282"	"1349.65837"	"1349.65750"	"0.65"	"0.00044"	"6/66"	"6"	"66"	"306462.490661621"	"HCD"	"MS2"	"32.48491"	"24.3"	"100.000"	"82.9407"	"28711"	"28711"	"28688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.6"	""	"28.6"	""	"27.2"	""	"48.2"	""	"46.1"	"52.2"	""	"525"	"11"	"34.000"	"27.000"	"1.95942799082643"	"13"	"0.002799"	"0.0296"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"675.35541"	"1349.70354"	"1349.70447"	"-0.69"	"-0.00046"	"7/86"	"7"	"86"	"3278959.5881958"	"HCD"	"MS2"	"9.699489"	"135.8"	"100.000"	"36.0300"	"9653"	"9653"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.2"	""	"131.0"	""	"181.0"	""	"292.9"	"0.2"	"218.2"	"257.9"	""	"839"	"32"	"36.000"	"29.000"	"0.0238633804488991"	"20"	"0.0007633"	"0.007437"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITMQNLNDR"	"[K].iTmQNLNDR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFV4; Q63279"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"675.35590"	"1349.70452"	"1349.70447"	"0.04"	"0.00003"	"8/86"	"8"	"86"	"2940357.29772949"	"HCD"	"MS2"	"14.51955"	"128.5"	"100.000"	"35.9042"	"9639"	"9639"	"9617"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.7"	""	"120.9"	""	"164.2"	""	"268.5"	"0.0"	"221.8"	"247.9"	""	"862"	"34"	"36.000"	"29.000"	"0.0156126732317597"	"20"	"0.0001991"	"0.002612"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQMk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"675.35968"	"1349.71208"	"1349.71352"	"-1.07"	"-0.00072"	"6/68"	"6"	"68"	"1559914.37493896"	"HCD"	"MS2"	"51.43927"	"141.7"	"100.000"	"36.7092"	"9963"	"9963"	"9936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.1"	""	"134.8"	""	"128.1"	""	"222.1"	""	"340.7"	"326.0"	""	"864"	"29"	"36.000"	"29.000"	"0.0577409263148063"	"19"	"0.0001991"	"0.002275"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPASDQMK"	"[R].dPASDQMk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"675.36011"	"1349.71294"	"1349.71352"	"-0.43"	"-0.00029"	"6/68"	"6"	"68"	"2269320.36450195"	"HCD"	"MS2"	"19.11739"	"178.8"	"100.000"	"36.8833"	"9996"	"9996"	"9977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"281.5"	""	"155.2"	""	"173.4"	""	"267.0"	"1.3"	"423.1"	"398.6"	""	"849"	"33"	"36.000"	"29.000"	"0.0194481230910319"	"20"	"0.0001991"	"0.002406"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSVWPFEK"	"[R].IDSVWPFEk.[V]"	"K9(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"675.36877"	"1349.73027"	"1349.73027"	"0.00"	"0.00000"	"4/76"	"4"	"76"	"107358.475952148"	"HCD"	"MS2"	"10.32004"	"6.9"	"100.000"	"108.7960"	"39048"	"39048"	"39040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.0"	""	"9.1"	""	"11.6"	""	"9.8"	""	"14.2"	"14.3"	""	"913"	"17"	"36.000"	"29.000"	"0.830693441955457"	"22"	"0.006267"	"0.07796"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"675.37195"	"1349.73662"	"1349.73748"	"-0.64"	"-0.00043"	"7/100"	"7"	"100"	"1356414.12719727"	"HCD"	"MS2"	"24.55863"	"103.2"	"100.000"	"51.8669"	"16075"	"16075"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.7"	""	"124.7"	""	"137.3"	""	"163.8"	"4.9"	"202.7"	"209.0"	""	"955"	"37"	"36.000"	"29.000"	"0.00997638902482805"	"23"	"0"	"2.546E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"675.37201"	"1349.73674"	"1349.73748"	"-0.55"	"-0.00037"	"7/100"	"7"	"100"	"6864463.97088623"	"HCD"	"MS2"	"20.1988"	"383.8"	"100.000"	"51.2149"	"15849"	"15849"	"15839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"546.9"	""	"465.4"	""	"458.4"	""	"683.7"	""	"705.4"	"784.5"	""	"955"	"42"	"36.000"	"29.000"	"0.00270379260515766"	"21"	"0"	"4.488E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"675.37238"	"1349.73747"	"1349.73748"	"0.00"	"0.00000"	"7/100"	"7"	"100"	"1427841.80340576"	"HCD"	"MS2"	"20.89702"	"104.6"	"100.000"	"51.5234"	"15970"	"15970"	"15951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.9"	""	"129.9"	""	"127.1"	""	"173.3"	"2.3"	"202.4"	"210.5"	""	"943"	"39"	"36.000"	"29.000"	"0.00585439063029822"	"21"	"0.0001686"	"0.001636"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"675.37244"	"1349.73760"	"1349.73748"	"0.09"	"0.00006"	"7/100"	"7"	"100"	"3690797.93786621"	"HCD"	"MS2"	"31.21891"	"232.4"	"100.000"	"50.9349"	"15735"	"15735"	"15718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.2"	""	"295.1"	""	"288.6"	""	"381.6"	""	"422.9"	"472.8"	""	"943"	"41"	"36.000"	"29.000"	"0.00338440008334448"	"20"	"0"	"5.66E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"675.37244"	"1349.73760"	"1349.73748"	"0.09"	"0.00006"	"7/100"	"7"	"100"	"6664948.81549072"	"HCD"	"MS2"	"17.27393"	"354.4"	"100.000"	"51.5664"	"15955"	"15955"	"15942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"530.6"	""	"429.4"	""	"413.0"	""	"621.3"	""	"655.7"	"715.5"	""	"943"	"39"	"36.000"	"29.000"	"0.00600456702699356"	"21"	"0"	"5.322E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNLPSNTAFR"	"[K].tNLPSNTAFR.[G]"	"N-Term(TMT6plex)"	"2"	"3"	"Q5QE80; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1;Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"Q5QE80; Q5QE79; P22985"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1; Aldehyde oxidase 4 OS=Rattus norvegicus OX=10116 GN=Aox4 PE=2 SV=1; Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"675.37250"	"1349.73772"	"1349.73748"	"0.18"	"0.00012"	"7/100"	"7"	"100"	"4778217.82012939"	"HCD"	"MS2"	"43.70761"	"286.2"	"100.000"	"51.2820"	"15839"	"15839"	"15821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"410.7"	""	"356.9"	""	"369.0"	""	"477.4"	""	"537.3"	"567.8"	""	"938"	"31"	"36.000"	"29.000"	"0.0359892538510693"	"21"	"0"	"0.0001028"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQDSWK"	"[K].dIQDSWk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"675.37683"	"1349.74639"	"1349.74654"	"-0.11"	"-0.00008"	"6/64"	"6"	"64"	"492152.573913574"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"70.6212"	"23724"	"23724"	"23701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.6"	""	"55.3"	""	"58.2"	""	"85.2"	""	"94.0"	"91.9"	""	"935"	"33"	"36.000"	"29.000"	"0.0259885240273914"	"25"	"0.0001991"	"0.005285"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQDSWK"	"[K].dIQDSWk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"675.37750"	"1349.74773"	"1349.74654"	"0.88"	"0.00060"	"6/64"	"6"	"64"	"1156320.31646729"	"HCD"	"MS2"	"2.257565"	"108.9"	"100.000"	"70.9160"	"23842"	"23842"	"23829"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.3"	""	"119.4"	""	"136.3"	""	"170.0"	"2.7"	"224.2"	"219.8"	""	"957"	"35"	"36.000"	"29.000"	"0.0144172338257306"	"25"	"0.001217"	"0.009345"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQDSWK"	"[K].dIQDSWk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"675.37762"	"1349.74797"	"1349.74654"	"1.06"	"0.00072"	"6/64"	"6"	"64"	"923421.147766113"	"HCD"	"MS2"	"2.282822"	"86.2"	"100.000"	"70.8843"	"23797"	"23797"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.5"	""	"83.9"	""	"100.7"	""	"150.9"	"3.5"	"167.6"	"176.7"	""	"956"	"37"	"36.000"	"29.000"	"0.00987251714477433"	"23"	"0.0001991"	"0.004819"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQDSWK"	"[K].dIQDSWk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"675.37854"	"1349.74980"	"1349.74654"	"2.42"	"0.00163"	"6/64"	"6"	"64"	"761410.686340332"	"HCD"	"MS2"	"8.910961"	"77.8"	"100.000"	"70.5896"	"23678"	"23678"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.9"	""	"90.8"	""	"96.1"	""	"138.1"	""	"150.1"	"153.5"	""	"930"	"36"	"36.000"	"29.000"	"0.0110523073328057"	"26"	"0.001049"	"0.008642"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"675.38647"	"1349.76567"	"1349.76767"	"-1.48"	"-0.00100"	"12/74"	"12"	"74"	"1204714.32354736"	"HCD"	"MS2"	"33.90526"	"102.9"	"100.000"	"36.2022"	"9760"	"9760"	"9743"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.8"	""	"130.2"	""	"110.1"	""	"150.0"	""	"211.7"	"247.6"	""	"883"	"33"	"36.000"	"29.000"	"0.0210344280674591"	"21"	"0.0001686"	"0.001401"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"675.38690"	"1349.76653"	"1349.76767"	"-0.84"	"-0.00057"	"14/74"	"14"	"74"	"1366334.0447998"	"HCD"	"MS2"	"0"	"116.2"	"100.000"	"36.6055"	"9883"	"9883"	"9863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.5"	""	"136.0"	""	"115.9"	""	"162.7"	""	"224.1"	"308.2"	""	"881"	"44"	"36.000"	"29.000"	"0.00170980236218881"	"27"	"9.9E-05"	"0.0009779"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"675.38757"	"1349.76787"	"1349.76767"	"0.15"	"0.00010"	"14/74"	"14"	"74"	"1353506.53662109"	"HCD"	"MS2"	"0"	"114.2"	"100.000"	"36.4979"	"9877"	"9877"	"9860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.4"	""	"119.8"	""	"120.6"	""	"145.7"	""	"243.1"	"307.5"	""	"833"	"46"	"36.000"	"29.000"	"0.00113400509481445"	"27"	"9.9E-05"	"0.0008404"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSAQEEK"	"[K].sLSAQEEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"675.38971"	"1349.77214"	"1349.76767"	"3.32"	"0.00224"	"7/74"	"7"	"74"	"1479054.72973633"	"HCD"	"MS2"	"37.06822"	"120.2"	"100.000"	"36.3118"	"9767"	"9767"	"9746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.7"	""	"130.6"	""	"153.6"	""	"170.4"	""	"220.7"	"288.0"	""	"913"	"41"	"36.000"	"29.000"	"0.00332997353431211"	"25"	"0.0001991"	"0.002746"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].SSGSLLNNAMk.[G]"	"K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"675.86572"	"1350.72417"	"1350.72487"	"-0.52"	"-0.00035"	"6/94"	"6"	"94"	"1198252.1675415"	"HCD"	"MS2"	"6.585624"	"66.2"	"100.000"	"52.5283"	"16379"	"16379"	"16356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.1"	""	"99.2"	""	"95.3"	""	"90.3"	""	"107.9"	"115.8"	""	"892"	"44"	"36.000"	"29.000"	"0.00178786556061777"	"29"	"0.0007633"	"0.007354"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].SSGSLLNNAMk.[G]"	"K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.7679"	"0.0000"	"1"	"1"	"1"	"675.86578"	"1350.72429"	"1350.72487"	"-0.43"	"-0.00029"	"7/94"	"7"	"94"	"1248242.78100586"	"HCD"	"MS2"	"6.442686"	"68.9"	"100.000"	"52.8549"	"16478"	"16478"	"16464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.5"	""	"111.5"	""	"93.3"	""	"93.4"	"0.4"	"111.4"	"117.6"	""	"888"	"56"	"36.000"	"29.000"	"0.000123419269088512"	"29"	"9.9E-05"	"0.001022"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].SSGSLLNNAMk.[G]"	"K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"675.86652"	"1350.72576"	"1350.72487"	"0.66"	"0.00044"	"6/94"	"6"	"94"	"538481.131408691"	"HCD"	"MS2"	"11.72625"	"37.2"	"100.000"	"52.8413"	"16507"	"16507"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"54.2"	""	"51.7"	""	"52.3"	""	"66.1"	"73.4"	""	"908"	"36"	"36.000"	"29.000"	"0.0116695968537707"	"27"	"0.0001991"	"0.002825"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].SSGSLLNNAMk.[G]"	"K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"675.86694"	"1350.72661"	"1350.72487"	"1.29"	"0.00087"	"6/94"	"6"	"94"	"497231.339111328"	"HCD"	"MS2"	"21.9244"	"35.1"	"100.000"	"53.1772"	"16610"	"16610"	"16586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.7"	""	"51.7"	""	"44.1"	""	"56.6"	""	"56.8"	"68.9"	""	"913"	"36"	"36.000"	"29.000"	"0.0124577835785187"	"27"	"0.001718"	"0.01496"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSDEDLK"	"[R].vSSDEDLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"675.87830"	"1350.74932"	"1350.75168"	"-1.75"	"-0.00118"	"6/64"	"6"	"64"	"532064.183227539"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"45.3869"	"13450"	"13450"	"13424"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.6"	""	"66.6"	""	"64.0"	""	"70.4"	"2.2"	"80.3"	"92.1"	""	"865"	"23"	"36.000"	"29.000"	"0.233876244673964"	"26"	"0.005589"	"0.07045"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSDEDLK"	"[R].vSSDEDLk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"675.87909"	"1350.75090"	"1350.75168"	"-0.58"	"-0.00039"	"5/64"	"5"	"64"	"1232798.98077393"	"HCD"	"MS2"	"0"	"107.6"	"100.000"	"45.0788"	"13324"	"13324"	"13302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.6"	""	"118.4"	""	"129.0"	""	"190.6"	""	"234.0"	"205.0"	""	"861"	"13"	"36.000"	"29.000"	"2.34408392048663"	"24"	"0.002166"	"0.01996"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"450.92654"	"1350.76508"	"1350.76694"	"-1.38"	"-0.00062"	"6/66"	"6"	"66"	"5618318.89038086"	"HCD"	"MS2"	"4.208933"	"195.3"	"100.000"	"61.9334"	"20197"	"20197"	"20177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.9"	""	"272.0"	""	"290.2"	""	"275.1"	""	"348.4"	"363.3"	""	"856"	"30"	"36.000"	"29.000"	"0.0434954440548658"	"22"	"0.0001991"	"0.004178"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"675.88647"	"1350.76567"	"1350.76694"	"-0.94"	"-0.00063"	"7/66"	"7"	"66"	"4815601.79638672"	"HCD"	"MS2"	"4.433175"	"346.7"	"100.000"	"61.5901"	"20058"	"20058"	"20038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"591.9"	""	"508.7"	""	"491.1"	""	"535.9"	"0.1"	"590.7"	"560.4"	""	"857"	"38"	"36.000"	"29.000"	"0.0062079873924393"	"26"	"0.0001991"	"0.002162"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEVTTEK"	"[K].wEVTTEk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"675.88660"	"1350.76592"	"1350.76694"	"-0.76"	"-0.00051"	"12/56"	"12"	"56"	"459167.135498047"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"69.0061"	"23068"	"23068"	"23045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.5"	""	"58.1"	""	"54.8"	""	"63.4"	"0.6"	"86.5"	"89.0"	""	"888"	"36"	"36.000"	"29.000"	"0.0100781999423642"	"27"	"0.0001991"	"0.005512"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"675.88660"	"1350.76592"	"1350.76694"	"-0.76"	"-0.00051"	"5/66"	"5"	"66"	"2699502.57147217"	"HCD"	"MS2"	"11.87134"	"196.8"	"100.000"	"61.5867"	"20024"	"20024"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"353.5"	""	"293.0"	""	"290.5"	""	"289.5"	""	"320.2"	"315.2"	""	"888"	"32"	"36.000"	"29.000"	"0.0312883722621413"	"23"	"0.0001991"	"0.003416"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"675.88660"	"1350.76592"	"1350.76694"	"-0.76"	"-0.00051"	"7/66"	"7"	"66"	"12051291.413269"	"HCD"	"MS2"	"0"	"635.9"	"82.619"	"61.8908"	"20180"	"20180"	"20161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1008.9"	""	"919.8"	""	"940.0"	""	"920.5"	""	"1070.3"	"1160.7"	""	"888"	"39"	"36.000"	"29.000"	"0.00611481004188912"	"26"	"0.0001991"	"0.003457"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"675.88666"	"1350.76604"	"1350.76694"	"-0.67"	"-0.00045"	"7/66"	"7"	"66"	"13185623.2520752"	"HCD"	"MS2"	"0.3535363"	"688.1"	"76.875"	"61.8720"	"20140"	"20140"	"20127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1082.4"	""	"999.3"	""	"1017.8"	""	"1000.1"	"1.1"	"1178.2"	"1232.7"	""	"888"	"39"	"36.000"	"29.000"	"0.00627166669812502"	"26"	"0.0001991"	"0.003362"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"450.92691"	"1350.76618"	"1350.76694"	"-0.56"	"-0.00025"	"6/66"	"6"	"66"	"4023617.19219971"	"HCD"	"MS2"	"8.619741"	"153.6"	"100.000"	"61.7055"	"20072"	"20072"	"20053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.9"	""	"228.7"	""	"228.3"	""	"255.1"	""	"269.3"	"245.2"	""	"888"	"33"	"36.000"	"29.000"	"0.0241759177862035"	"22"	"0.001162"	"0.009241"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"450.92694"	"1350.76627"	"1350.76694"	"-0.49"	"-0.00022"	"6/66"	"6"	"66"	"4711707.52642822"	"HCD"	"MS2"	"5.119972"	"172.0"	"100.000"	"62.0209"	"20200"	"20200"	"20183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"275.2"	""	"238.7"	""	"265.5"	""	"247.8"	""	"293.1"	"309.6"	""	"888"	"38"	"36.000"	"29.000"	"0.00764509647293786"	"26"	"0.0001991"	"0.002369"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"450.92694"	"1350.76627"	"1350.76694"	"-0.49"	"-0.00022"	"6/66"	"6"	"66"	"3671579.28546143"	"HCD"	"MS2"	"9.458258"	"137.2"	"100.000"	"61.6243"	"20072"	"20072"	"20054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.9"	""	"207.6"	""	"206.6"	""	"211.5"	""	"218.7"	"246.3"	""	"888"	"29"	"36.000"	"29.000"	"0.0608671504177195"	"22"	"0.001488"	"0.01237"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"675.88678"	"1350.76628"	"1350.76694"	"-0.48"	"-0.00033"	"5/66"	"5"	"66"	"1587471.49176025"	"HCD"	"MS2"	"3.679492"	"121.4"	"100.000"	"62.1874"	"20300"	"20300"	"20281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.3"	""	"164.0"	""	"187.0"	""	"182.2"	""	"210.8"	"224.2"	""	"888"	"31"	"36.000"	"29.000"	"0.0315778800062078"	"23"	"0.001049"	"0.008745"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"675.88708"	"1350.76689"	"1350.76694"	"-0.03"	"-0.00002"	"5/66"	"5"	"66"	"442743.90246582"	"HCD"	"MS2"	"10.99807"	"36.9"	"100.000"	"62.5209"	"20403"	"20403"	"20379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"52.6"	""	"53.8"	""	"60.2"	""	"71.1"	"60.6"	""	"891"	"17"	"36.000"	"29.000"	"0.911691085660843"	"23"	"0.00192"	"0.01599"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPK"	"[R].tFEGVDPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"675.88708"	"1350.76689"	"1350.76694"	"-0.03"	"-0.00002"	"5/66"	"5"	"66"	"3368354.15136719"	"HCD"	"MS2"	"0"	"240.3"	"100.000"	"62.1615"	"20257"	"20257"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"350.5"	""	"332.7"	"2.6"	"340.0"	""	"354.7"	"2.8"	"420.8"	"472.1"	""	"891"	"32"	"36.000"	"29.000"	"0.029569753786405"	"25"	"0.0001686"	"0.001646"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEDSLTK"	"[K].lSEDSLTk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O54748"	"Serine/threonine-protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Stk3 PE=1 SV=1"	"O54748"	"Serine/threonine-protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Stk3 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"675.89825"	"1350.78923"	"1350.78807"	"0.86"	"0.00058"	"7/66"	"7"	"66"	"485358.010742188"	"HCD"	"MS2"	"55.55476"	"40.9"	"100.000"	"63.0005"	"20631"	"20631"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.3"	""	"44.1"	""	"46.9"	""	"75.1"	""	"84.9"	"84.5"	""	"780"	"9"	"35.000"	"28.000"	"4.8536069859084"	"20"	"0.002711"	"0.02837"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFENWLER"	"[R].eFENWLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"676.34540"	"1351.68352"	"1351.68438"	"-0.64"	"-0.00043"	"6/76"	"6"	"76"	"1227457.47479248"	"HCD"	"MS2"	"55.47467"	"58.1"	"100.000"	"101.1112"	"36015"	"36015"	"35996"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.9"	""	"59.0"	""	"65.9"	""	"97.8"	"0.1"	"111.0"	"131.6"	""	"783"	"17"	"35.000"	"28.000"	"0.768655548381312"	"17"	"0.001872"	"0.01552"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFENWLER"	"[R].eFENWLER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"676.34576"	"1351.68425"	"1351.68438"	"-0.10"	"-0.00006"	"6/76"	"6"	"76"	"1116630.82470703"	"HCD"	"MS2"	"47.87836"	"55.9"	"100.000"	"101.2442"	"36095"	"36095"	"36082"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.9"	""	"56.3"	""	"65.7"	""	"89.6"	""	"115.6"	"120.8"	""	"782"	"23"	"35.000"	"28.000"	"0.206622093444096"	"21"	"0.0001991"	"0.003911"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVHSYFAER"	"[R].nVHSYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"451.23621"	"1351.69406"	"1351.69561"	"-1.15"	"-0.00052"	"6/88"	"6"	"88"	"4975035.62341309"	"HCD"	"MS2"	"17.1016"	"96.8"	"100.000"	"37.2995"	"10166"	"10166"	"10147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.1"	""	"133.1"	""	"131.8"	""	"156.3"	"2.6"	"174.5"	"191.6"	""	"824"	"26"	"36.000"	"29.000"	"0.0995169863791315"	"22"	"0.0005778"	"0.007076"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVHSYFAER"	"[R].nVHSYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"451.23642"	"1351.69471"	"1351.69561"	"-0.67"	"-0.00030"	"7/88"	"7"	"88"	"8171043.6517334"	"HCD"	"MS2"	"54.56201"	"166.0"	"100.000"	"36.8701"	"10028"	"10028"	"10010"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.3"	""	"216.7"	""	"205.5"	""	"306.4"	"5.8"	"311.0"	"324.8"	""	"826"	"30"	"36.000"	"29.000"	"0.0368935164781851"	"23"	"0.0001686"	"0.00161"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVHSYFAER"	"[R].nVHSYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.6757"	"0.0000"	"1"	"1"	"1"	"451.23651"	"1351.69498"	"1351.69561"	"-0.47"	"-0.00021"	"7/88"	"7"	"88"	"11381540.81073"	"HCD"	"MS2"	"45.12213"	"168.4"	"100.000"	"36.9939"	"10041"	"10041"	"10020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.1"	""	"211.4"	""	"224.1"	""	"282.1"	"1.5"	"322.6"	"346.7"	""	"829"	"37"	"36.000"	"29.000"	"0.00815688867083487"	"27"	"0.0001686"	"0.001431"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVHSYFAER"	"[R].nVHSYFAER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"451.23700"	"1351.69645"	"1351.69561"	"0.61"	"0.00028"	"7/88"	"7"	"88"	"7189380.20562744"	"HCD"	"MS2"	"9.33489"	"101.8"	"100.000"	"37.1621"	"10148"	"10148"	"10131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.2"	""	"127.9"	""	"147.1"	""	"178.5"	"1.6"	"175.9"	"194.2"	""	"819"	"30"	"36.000"	"29.000"	"0.0365808595588784"	"23"	"0.0001686"	"0.001319"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LMTTGNNTVR"	"[K].lmTTGNNTVR.[F]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q3B7D1"	"Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus OX=10116 GN=Ube2z PE=1 SV=2"	"Q3B7D1"	"Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus OX=10116 GN=Ube2z PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"676.36322"	"1351.71916"	"1351.72012"	"-0.70"	"-0.00048"	"8/90"	"8"	"90"	"407115.483886719"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"29.9060"	"7225"	"7225"	"7203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"28.9"	""	"36.9"	""	"57.5"	""	"44.9"	"35.5"	""	"862"	"25"	"36.000"	"29.000"	"0.143046511205175"	"21"	"0.008135"	"0.1036"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANAEEMTK"	"[K].aNAEEMTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"676.36761"	"1351.72795"	"1351.72917"	"-0.90"	"-0.00061"	"10/74"	"10"	"74"	"1460275.79302979"	"HCD"	"MS2"	"60.14691"	"122.1"	"100.000"	"37.1138"	"10128"	"10128"	"10106"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.2"	""	"139.0"	""	"155.5"	""	"211.9"	""	"235.8"	"256.0"	""	"877"	"23"	"36.000"	"29.000"	"0.240419449117794"	"18"	"0.0001991"	"0.002783"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANAEEMTK"	"[K].aNAEEMTk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"676.36786"	"1351.72844"	"1351.72917"	"-0.54"	"-0.00037"	"6/74"	"6"	"74"	"1505468.40148926"	"HCD"	"MS2"	"64.23796"	"125.3"	"100.000"	"37.2006"	"10126"	"10126"	"10100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.6"	""	"157.6"	""	"142.5"	""	"225.0"	""	"232.0"	"269.7"	""	"879"	"25"	"36.000"	"29.000"	"0.13770790758367"	"19"	"0.0001991"	"0.002473"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASDMIDK"	"[K].nASDMIDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"676.36792"	"1351.72856"	"1351.72917"	"-0.45"	"-0.00030"	"7/78"	"7"	"78"	"2120990.99310303"	"HCD"	"MS2"	"17.46364"	"189.7"	"100.000"	"51.6465"	"16020"	"16020"	"15999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"257.4"	""	"259.4"	""	"263.2"	""	"230.7"	""	"391.7"	"400.6"	""	"878"	"32"	"36.000"	"29.000"	"0.0310788199344636"	"21"	"0.0001686"	"0.001954"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASDMIDK"	"[K].nASDMIDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"676.36816"	"1351.72905"	"1351.72917"	"-0.09"	"-0.00006"	"12/78"	"12"	"78"	"1163112.46777344"	"HCD"	"MS2"	"0"	"109.2"	"100.000"	"51.9802"	"16156"	"16156"	"16139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.8"	""	"135.6"	""	"145.0"	""	"133.9"	"1.1"	"237.6"	"251.4"	""	"879"	"40"	"36.000"	"29.000"	"0.0046021299686837"	"28"	"0.0001686"	"0.001311"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASDMIDK"	"[K].nASDMIDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"676.36816"	"1351.72905"	"1351.72917"	"-0.09"	"-0.00006"	"12/78"	"12"	"78"	"1345249.54840088"	"HCD"	"MS2"	"0"	"118.6"	"100.000"	"52.2861"	"16246"	"16246"	"16227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.3"	""	"133.3"	""	"169.6"	""	"122.4"	""	"253.7"	"282.4"	""	"879"	"40"	"36.000"	"29.000"	"0.00433469833934916"	"27"	"0.0001686"	"0.001067"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASDMIDK"	"[K].nASDMIDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"676.36816"	"1351.72905"	"1351.72917"	"-0.09"	"-0.00006"	"7/78"	"7"	"78"	"2317107.23919678"	"HCD"	"MS2"	"29.16194"	"204.7"	"100.000"	"51.9843"	"16123"	"16123"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.7"	""	"271.0"	""	"270.9"	""	"245.0"	""	"430.0"	"446.2"	""	"879"	"32"	"36.000"	"29.000"	"0.0299198133145899"	"19"	"0.0001991"	"0.002391"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"676.37366"	"1351.74004"	"1351.74190"	"-1.37"	"-0.00093"	"5/86"	"5"	"86"	"229206.577026367"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"76.3696"	"26055"	"26055"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.0"	""	"20.0"	""	"25.7"	""	"33.8"	""	"36.8"	"32.6"	""	"896"	"19"	"36.000"	"29.000"	"0.5131897977676"	"25"	"0.0001991"	"0.003343"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTFEDLIQR"	"[K].tTFEDLIQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"676.37378"	"1351.74028"	"1351.74190"	"-1.19"	"-0.00081"	"14/74"	"14"	"74"	"794627.566589355"	"HCD"	"MS2"	"27.66574"	"46.8"	"100.000"	"97.0383"	"34396"	"34396"	"34378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.0"	""	"51.1"	""	"59.3"	""	"81.9"	""	"96.9"	"99.9"	""	"896"	"35"	"36.000"	"29.000"	"0.0145639109228674"	"21"	"0"	"0.0001832"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTFEDLIQR"	"[K].tTFEDLIQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"676.37390"	"1351.74053"	"1351.74190"	"-1.01"	"-0.00069"	"7/74"	"7"	"74"	"767479.61328125"	"HCD"	"MS2"	"29.39129"	"44.2"	"100.000"	"96.9781"	"34341"	"34341"	"34322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.9"	""	"47.6"	""	"59.0"	""	"84.5"	""	"89.5"	"82.7"	""	"896"	"44"	"36.000"	"29.000"	"0.00171900845980541"	"22"	"0"	"5.137E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDYIAGLDSR"	"[K].iDYIAGLDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"676.37390"	"1351.74053"	"1351.74190"	"-1.01"	"-0.00069"	"8/86"	"8"	"86"	"6929828.34179688"	"HCD"	"MS2"	"0"	"262.1"	"100.000"	"99.9470"	"35571"	"35571"	"35558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"407.1"	""	"363.7"	""	"414.6"	""	"430.4"	"0.8"	"413.2"	"447.8"	""	"896"	"52"	"36.000"	"29.000"	"0.000301493542015374"	"19"	"0"	"4.102E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDYIAGLDSR"	"[K].iDYIAGLDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"676.37396"	"1351.74065"	"1351.74190"	"-0.92"	"-0.00062"	"8/86"	"8"	"86"	"500136.394836426"	"HCD"	"MS2"	"3.115278"	"26.3"	"100.000"	"100.2538"	"35695"	"35695"	"35678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"36.2"	""	"43.2"	""	"41.8"	"1.1"	"48.6"	"48.1"	""	"889"	"44"	"36.000"	"29.000"	"0.00190928941696992"	"22"	"0"	"9.948E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"676.37402"	"1351.74077"	"1351.74190"	"-0.83"	"-0.00056"	"8/86"	"8"	"86"	"234599.350524902"	"HCD"	"MS2"	"16.16765"	"17.5"	"100.000"	"76.2488"	"25974"	"25974"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"25.8"	""	"23.3"	""	"26.7"	""	"33.3"	"39.2"	""	"888"	"32"	"36.000"	"29.000"	"0.0306466472905067"	"23"	"0.0001686"	"0.001804"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDYIAGLDSR"	"[K].iDYIAGLDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"676.37408"	"1351.74089"	"1351.74190"	"-0.74"	"-0.00050"	"8/86"	"8"	"86"	"4494524.03912354"	"HCD"	"MS2"	"8.207237"	"172.6"	"100.000"	"99.6300"	"35414"	"35414"	"35398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"276.6"	""	"273.9"	""	"260.4"	""	"267.2"	""	"250.9"	"303.8"	""	"888"	"54"	"36.000"	"29.000"	"0.000171546937812006"	"19"	"0"	"3.583E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTFEDLIQR"	"[K].tTFEDLIQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"676.37421"	"1351.74114"	"1351.74190"	"-0.56"	"-0.00038"	"7/74"	"7"	"74"	"700556.271240234"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"97.3452"	"34520"	"34520"	"34504"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"41.6"	""	"50.8"	""	"76.3"	"1.8"	"77.5"	"85.9"	""	"888"	"42"	"36.000"	"29.000"	"0.00276938266954194"	"21"	"0"	"0.0001369"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"676.37421"	"1351.74114"	"1351.74190"	"-0.56"	"-0.00038"	"6/86"	"6"	"86"	"1185952.24517822"	"HCD"	"MS2"	"21.77722"	"72.0"	"100.000"	"75.3177"	"25596"	"25596"	"25569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.9"	""	"81.5"	""	"96.8"	""	"122.1"	"0.3"	"143.1"	"156.8"	""	"888"	"38"	"36.000"	"29.000"	"0.00650703241384424"	"24"	"0"	"0.0001272"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"676.37427"	"1351.74126"	"1351.74190"	"-0.47"	"-0.00032"	"6/86"	"6"	"86"	"982164.483154297"	"HCD"	"MS2"	"14.13861"	"61.1"	"100.000"	"75.4341"	"25674"	"25674"	"25651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.0"	""	"70.8"	""	"83.9"	""	"98.5"	""	"131.8"	"126.5"	""	"888"	"42"	"36.000"	"29.000"	"0.00279500745188596"	""	"0"	"0.0001505"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDYIAGLDSR"	"[K].iDYIAGLDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"676.37427"	"1351.74126"	"1351.74190"	"-0.47"	"-0.00032"	"8/86"	"8"	"86"	"4514723.01934814"	"HCD"	"MS2"	"0"	"171.7"	"100.000"	"99.9411"	"35541"	"35541"	"35524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.7"	""	"242.9"	""	"268.3"	""	"262.0"	""	"278.4"	"311.7"	""	"888"	"50"	"36.000"	"29.000"	"0.000438917574027681"	"21"	"0"	"2.725E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"676.37427"	"1351.74126"	"1351.74190"	"-0.47"	"-0.00032"	"7/86"	"7"	"86"	"7803923.83520508"	"HCD"	"MS2"	"0"	"348.7"	"100.000"	"75.7268"	"25794"	"25794"	"25777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"372.9"	"2.5"	"401.3"	""	"475.8"	""	"571.4"	""	"661.0"	"834.0"	""	"888"	"51"	"36.000"	"29.000"	"0.00037877645062381"	"28"	"9.9E-05"	"0.0004078"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTFEDLIQR"	"[K].tTFEDLIQR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"676.37433"	"1351.74138"	"1351.74190"	"-0.38"	"-0.00026"	"7/74"	"7"	"74"	"680222.743347168"	"HCD"	"MS2"	"1.948334"	"41.5"	"100.000"	"97.2875"	"34466"	"34466"	"34450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"39.9"	""	"51.1"	""	"79.9"	""	"89.1"	"81.1"	""	"904"	"44"	"36.000"	"29.000"	"0.00168321051227065"	"24"	"0"	"7.051E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"676.37433"	"1351.74138"	"1351.74190"	"-0.38"	"-0.00026"	"7/86"	"7"	"86"	"7669183.26043701"	"HCD"	"MS2"	"0"	"335.1"	"100.000"	"75.6265"	"25722"	"25722"	"25707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"370.6"	""	"371.6"	""	"471.5"	""	"546.3"	""	"649.0"	"778.2"	""	"904"	"51"	"36.000"	"29.000"	"0.000390965499286613"	"28"	"9.9E-05"	"0.0004184"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"676.37445"	"1351.74162"	"1351.74190"	"-0.20"	"-0.00014"	"7/86"	"7"	"86"	"2507225.89666748"	"HCD"	"MS2"	"0"	"121.8"	"100.000"	"75.9466"	"25851"	"25851"	"25833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.0"	""	"129.3"	""	"174.5"	""	"199.7"	""	"238.0"	"283.2"	""	"903"	"51"	"36.000"	"29.000"	"0.000392335633822765"	"28"	"0"	"0.0002022"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQEIATYR"	"[R].lEQEIATYR.[RS]"	"N-Term(TMT6plex)"	"1"	"6"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"P25030; Q6IFV4; Q6IFU7; Q6IFU8; Q6IFV1; Q63279"	"Keratin, type I cytoskeletal 20 OS=Rattus norvegicus OX=10116 GN=Krt20 PE=1 SV=2; Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 14 OS=Rattus norvegicus OX=10116 GN=Krt14 PE=2 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"676.37463"	"1351.74199"	"1351.74190"	"0.07"	"0.00005"	"7/86"	"7"	"86"	"3111879.12573242"	"HCD"	"MS2"	"0.4807869"	"139.1"	"100.000"	"76.0260"	"25915"	"25915"	"25897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.4"	""	"147.1"	""	"206.0"	""	"229.5"	"0.6"	"252.7"	"330.8"	""	"903"	"51"	"36.000"	"29.000"	"0.000377274762731408"	"28"	"0"	"0.0002936"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDYIAGLDSR"	"[K].iDYIAGLDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"676.37469"	"1351.74211"	"1351.74190"	"0.16"	"0.00011"	"8/86"	"8"	"86"	"302455.169128418"	"HCD"	"MS2"	"4.88765"	"18.9"	"100.000"	"100.2502"	"35666"	"35666"	"35649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"24.6"	""	"25.1"	""	"31.8"	""	"36.7"	"36.7"	""	"895"	"41"	"36.000"	"29.000"	"0.0037565834396743"	"24"	"0"	"0.0001234"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDYIAGLDSR"	"[K].iDYIAGLDSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"P36972"	"Adenine phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Aprt PE=1 SV=1"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"676.37494"	"1351.74260"	"1351.74190"	"0.52"	"0.00035"	"8/86"	"8"	"86"	"2677898.97650146"	"HCD"	"MS2"	"19.78464"	"114.0"	"100.000"	"99.6566"	"35452"	"35452"	"35440"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"177.2"	""	"178.2"	""	"168.1"	""	"176.2"	"1.9"	"181.2"	"195.2"	""	"905"	"53"	"36.000"	"29.000"	"0.000209227412183165"	"20"	"0"	"1.574E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTIIATGGYGR"	"[K].nTIIATGGYGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"676.37952"	"1351.75176"	"1351.75313"	"-1.02"	"-0.00069"	"8/108"	"8"	"108"	"1212778.79003906"	"HCD"	"MS2"	"7.055242"	"89.6"	"100.000"	"50.8381"	"15695"	"15695"	"15670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.7"	""	"129.6"	""	"124.3"	""	"142.7"	""	"176.4"	"172.7"	""	"909"	"43"	"36.000"	"29.000"	"0.00204424944048999"	"20"	"0"	"4.814E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATFSNPK"	"[K].eATFSNPk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"676.38391"	"1351.76055"	"1351.76219"	"-1.21"	"-0.00082"	"11/68"	"11"	"68"	"715418.702636719"	"HCD"	"MS2"	"0"	"64.8"	"100.000"	"44.8907"	"13248"	"13248"	"13226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.0"	""	"80.6"	""	"68.2"	""	"110.1"	"1.6"	"128.6"	"132.5"	""	"820"	"35"	"36.000"	"29.000"	"0.0119614507574048"	"21"	"0.0001991"	"0.002147"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTIIATGGYGR"	"[K].nTIIATGGYGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"676.38397"	"1351.76067"	"1351.75313"	"5.58"	"0.00377"	"7/108"	"7"	"108"	"736719.097106934"	"HCD"	"MS2"	"10.58649"	"64.4"	"100.000"	"51.0234"	"15737"	"15737"	"15717"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.0"	""	"80.7"	""	"81.6"	""	"122.3"	""	"132.5"	"131.5"	""	"820"	"11"	"36.000"	"29.000"	"2.94974080981517"	"21"	"0.002508"	"0.02338"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATFSNPK"	"[K].eATFSNPk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"P18395"	"Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"676.38458"	"1351.76189"	"1351.76219"	"-0.22"	"-0.00015"	"7/68"	"7"	"68"	"794634.710693359"	"HCD"	"MS2"	"0"	"71.4"	"100.000"	"44.6802"	"13196"	"13196"	"13174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.2"	""	"77.7"	""	"91.9"	""	"108.0"	"0.4"	"150.4"	"140.1"	""	"817"	"34"	"36.000"	"29.000"	"0.0163377430277408"	"21"	"0.0001991"	"0.002459"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVPVHVSSR"	"[K].eIVPVHVSSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"451.26727"	"1351.78727"	"1351.78952"	"-1.66"	"-0.00075"	"7/88"	"7"	"88"	"2025481.60388184"	"HCD"	"MS2"	"37.10579"	"79.2"	"100.000"	"42.6374"	"12364"	"12364"	"12335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.6"	""	"98.2"	""	"100.3"	""	"118.0"	""	"169.5"	"166.8"	""	"724"	"32"	"35.000"	"28.000"	"0.0213161403238724"	"20"	"9.9E-05"	"0.0005146"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVPVHVSSR"	"[K].eIVPVHVSSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"Q5XI22"	"Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus OX=10116 GN=Acat2 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"451.26773"	"1351.78864"	"1351.78952"	"-0.65"	"-0.00029"	"7/88"	"7"	"88"	"1909136.49237061"	"HCD"	"MS2"	"32.08649"	"76.8"	"100.000"	"42.8146"	"12402"	"12402"	"12378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.3"	""	"87.6"	""	"89.5"	""	"133.7"	"0.1"	"146.4"	"168.3"	""	"703"	"29"	"35.000"	"28.000"	"0.0443532378408621"	"15"	"9.9E-05"	"0.001008"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLVEEIK"	"[R].yLVEEIk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"Q64611"	"Cysteine sulfinic acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Csad PE=1 SV=1"	"0"	"2"	"2"	"0.4848"	"0.0000"	"1"	"1"	"1"	"676.41479"	"1351.82231"	"1351.82372"	"-1.04"	"-0.00071"	"6/50"	"6"	"50"	"334589.232788086"	"HCD"	"MS2"	"36.10023"	"29.5"	"100.000"	"93.1105"	"32810"	"32810"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"34.4"	""	"41.9"	""	"43.7"	""	"50.6"	"64.9"	""	"467"	"33"	"33.000"	"26.000"	"0.0112017760256667"	""	"0.005507"	"0.06969"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQTTTMAK"	"[K].nQTTTMAk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70582"	"Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1"	"P70582"	"Nuclear pore complex protein Nup54 OS=Rattus norvegicus OX=10116 GN=Nup54 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"676.88409"	"1352.76091"	"1352.76081"	"0.08"	"0.00005"	"12/74"	"12"	"74"	"375575.493041992"	"HCD"	"MS2"	"39.12437"	"37.1"	"100.000"	"30.2022"	"7344"	"7344"	"7319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.7"	""	"50.1"	""	"52.6"	""	"47.5"	""	"70.4"	"76.7"	""	"780"	"26"	"35.000"	"28.000"	"0.0942029725433526"	"16"	"0.0001686"	"0.001841"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"676.89362"	"1352.77995"	"1352.78259"	"-1.95"	"-0.00132"	"12/62"	"12"	"62"	"3083219.49749756"	"HCD"	"MS2"	"0"	"237.4"	"100.000"	"63.6983"	"20915"	"20915"	"20889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"350.8"	"2.5"	"334.6"	""	"309.4"	""	"394.5"	""	"413.0"	"444.6"	""	"698"	"37"	"35.000"	"28.000"	"0.00678930668486309"	"25"	"0.0001686"	"0.001228"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFLADVK"	"[K].dSFLADVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"676.89380"	"1352.78032"	"1352.78259"	"-1.68"	"-0.00113"	"7/66"	"7"	"66"	"421978.879211426"	"HCD"	"MS2"	"49.13929"	"38.0"	"100.000"	"93.5792"	"32998"	"32998"	"32984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.7"	""	"48.4"	""	"43.5"	""	"69.0"	""	"64.1"	"69.0"	""	"689"	"41"	"35.000"	"28.000"	"0.00281312626933035"	"22"	"0"	"0.0001191"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"676.89398"	"1352.78069"	"1352.78259"	"-1.41"	"-0.00095"	"12/62"	"12"	"62"	"3814310.25494385"	"HCD"	"MS2"	"0"	"315.7"	"100.000"	"63.7340"	"20897"	"20897"	"20882"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"486.3"	""	"446.1"	""	"421.3"	""	"514.3"	""	"538.3"	"582.8"	""	"687"	"39"	"35.000"	"28.000"	"0.00448669700073287"	"26"	"0.0001686"	"0.001248"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"451.59854"	"1352.78107"	"1352.78259"	"-1.12"	"-0.00051"	"6/62"	"6"	"62"	"6210429.7911377"	"HCD"	"MS2"	"4.042691"	"253.2"	"100.000"	"63.8589"	"20980"	"20980"	"20967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"365.1"	""	"341.0"	""	"344.4"	""	"414.1"	""	"470.0"	"467.0"	""	"687"	"36"	"35.000"	"28.000"	"0.0089521374442462"	""	"0.0001991"	"0.005463"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFLADVK"	"[K].dSFLADVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"676.89423"	"1352.78118"	"1352.78259"	"-1.04"	"-0.00071"	"7/66"	"7"	"66"	"518166.257568359"	"HCD"	"MS2"	"4.561153"	"49.2"	"100.000"	"94.0091"	"33137"	"33137"	"33115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.4"	""	"64.9"	""	"66.5"	""	"74.8"	""	"94.2"	"98.9"	""	"686"	"38"	"35.000"	"28.000"	"0.0053124410028698"	"23"	"0"	"0.0002217"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"676.89423"	"1352.78118"	"1352.78259"	"-1.04"	"-0.00071"	"7/62"	"7"	"62"	"1533960.6706543"	"HCD"	"MS2"	"0"	"126.3"	"100.000"	"64.5927"	"21277"	"21277"	"21259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.9"	""	"163.0"	""	"186.7"	""	"190.5"	""	"234.5"	"266.1"	""	"686"	"39"	"35.000"	"28.000"	"0.00442888210849442"	""	"9.9E-05"	"0.0006018"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"676.89423"	"1352.78118"	"1352.78259"	"-1.04"	"-0.00071"	"12/58"	"12"	"58"	"1744116.20843506"	"HCD"	"MS2"	"15.42942"	"148.7"	"100.000"	"54.6888"	"17261"	"17261"	"17244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.5"	""	"169.0"	""	"168.2"	""	"229.0"	""	"321.4"	"318.9"	""	"686"	"34"	"35.000"	"28.000"	"0.0144975334693102"	"22"	"0.001488"	"0.01232"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"676.89423"	"1352.78118"	"1352.78259"	"-1.04"	"-0.00071"	"12/62"	"12"	"62"	"40144246.4291992"	"HCD"	"MS2"	"0"	"898.4"	"30.400"	"63.9917"	"21034"	"21034"	"21019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1281.4"	""	"1204.8"	""	"1222.4"	""	"1440.1"	""	"1587.4"	"1783.8"	""	"686"	"36"	"35.000"	"28.000"	"0.00895971344558927"	"25"	"0.0009352"	"0.007941"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"451.59863"	"1352.78135"	"1352.78259"	"-0.92"	"-0.00041"	"6/62"	"6"	"62"	"4875023.08148193"	"HCD"	"MS2"	"0"	"203.3"	"100.000"	"63.8556"	"20947"	"20947"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"297.4"	""	"284.0"	""	"264.4"	""	"340.3"	""	"352.6"	"389.8"	""	"683"	"33"	"35.000"	"28.000"	"0.0160468838088681"	"28"	"0.001596"	"0.01288"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.89447"	"1352.78166"	"1352.78259"	"-0.68"	"-0.00046"	"9/58"	"9"	"58"	"1603294.13891602"	"HCD"	"MS2"	"40.05416"	"131.0"	"100.000"	"54.3899"	"17139"	"17139"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.3"	""	"150.7"	""	"160.7"	""	"212.4"	""	"279.3"	"261.6"	""	"681"	"17"	"35.000"	"28.000"	"0.612515546601353"	"14"	"0.003704"	"0.04017"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFLADVK"	"[K].dSFLADVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"676.89459"	"1352.78191"	"1352.78259"	"-0.50"	"-0.00034"	"7/66"	"7"	"66"	"594141.555236816"	"HCD"	"MS2"	"29.34065"	"52.1"	"100.000"	"93.7046"	"33013"	"33013"	"32993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	""	"68.6"	""	"65.3"	""	"79.6"	"0.2"	"102.5"	"98.8"	""	"681"	"43"	"35.000"	"28.000"	"0.00168700789969031"	"23"	"0"	"0.0002062"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"676.89459"	"1352.78191"	"1352.78259"	"-0.50"	"-0.00034"	"12/58"	"12"	"58"	"2134801.84356689"	"HCD"	"MS2"	"16.35551"	"181.8"	"100.000"	"55.0175"	"17360"	"17360"	"17351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"248.6"	""	"207.2"	""	"218.8"	""	"275.6"	""	"385.9"	"392.5"	""	"681"	"34"	"35.000"	"28.000"	"0.0143918663157438"	"22"	"0.001596"	"0.01301"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSFLADVK"	"[K].dSFLADVk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"P31211"	"Corticosteroid-binding globulin OS=Rattus norvegicus OX=10116 GN=Serpina6 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"676.89465"	"1352.78203"	"1352.78259"	"-0.41"	"-0.00028"	"14/66"	"14"	"66"	"539888.342224121"	"HCD"	"MS2"	"2.878206"	"48.8"	"100.000"	"93.9071"	"33131"	"33131"	"33110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.6"	""	"59.5"	""	"67.2"	""	"66.2"	"0.2"	"96.9"	"97.1"	""	"685"	"35"	"35.000"	"28.000"	"0.0107068218323995"	"25"	"0"	"0.0002711"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"676.89465"	"1352.78203"	"1352.78259"	"-0.41"	"-0.00028"	"12/62"	"12"	"62"	"36964645.9237061"	"HCD"	"MS2"	"0"	"1078.2"	"39.472"	"64.0251"	"21015"	"21015"	"21004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1572.6"	""	"1397.9"	""	"1490.4"	""	"1705.4"	"2.4"	"1919.3"	"2126.9"	""	"685"	"39"	"35.000"	"28.000"	"0.00441225471454898"	"26"	"0.0001991"	"0.005546"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"676.89471"	"1352.78215"	"1352.78259"	"-0.32"	"-0.00022"	"12/62"	"12"	"62"	"1629809.41729736"	"HCD"	"MS2"	"0"	"136.7"	"100.000"	"64.6078"	"21249"	"21249"	"21231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.5"	""	"170.3"	""	"191.1"	""	"202.0"	""	"263.1"	"295.5"	""	"685"	"40"	"35.000"	"28.000"	"0.0030878811463004"	"27"	"9.9E-05"	"0.0007337"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIADAFTK"	"[K].eIADAFTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"676.89478"	"1352.78227"	"1352.78259"	"-0.23"	"-0.00016"	"6/68"	"6"	"68"	"309688.252197266"	"HCD"	"MS2"	"21.64042"	"29.7"	"100.000"	"83.8814"	"29092"	"29092"	"29073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.8"	""	"44.5"	""	"38.2"	""	"51.6"	""	"47.6"	"56.5"	""	"685"	"30"	"35.000"	"28.000"	"0.033239966378158"	"20"	"9.9E-05"	"0.0008537"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIADAFTK"	"[K].eIADAFTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"676.89484"	"1352.78240"	"1352.78259"	"-0.14"	"-0.00010"	"7/68"	"7"	"68"	"1149591.29516602"	"HCD"	"MS2"	"0"	"94.6"	"100.000"	"84.1337"	"29165"	"29165"	"29146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.1"	""	"120.0"	""	"131.4"	""	"152.6"	"1.1"	"168.3"	"169.3"	""	"685"	"43"	"35.000"	"28.000"	"0.00183510355198319"	""	"9.9E-05"	"0.0004731"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"676.89484"	"1352.78240"	"1352.78259"	"-0.14"	"-0.00010"	"12/62"	"12"	"62"	"13192385.6723633"	"HCD"	"MS2"	"0"	"829.9"	"86.603"	"64.2896"	"21154"	"21154"	"21137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1103.9"	""	"1022.6"	""	"1183.2"	""	"1253.3"	""	"1548.9"	"1763.4"	""	"685"	"34"	"35.000"	"28.000"	"0.0135413067373334"	"23"	"0.0001991"	"0.003194"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVK"	"[R].eLYDAGVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"676.89490"	"1352.78252"	"1352.78259"	"-0.05"	"-0.00003"	"12/62"	"12"	"62"	"16536270.8309326"	"HCD"	"MS2"	"0"	"648.4"	"52.929"	"64.3002"	"21125"	"21125"	"21114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"850.2"	""	"825.9"	""	"927.3"	""	"993.3"	"0.0"	"1195.7"	"1356.2"	""	"685"	"36"	"35.000"	"28.000"	"0.00890554650384105"	"26"	"0.0001991"	"0.002883"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIADAFTK"	"[K].eIADAFTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5745"	"0.0000"	"1"	"1"	"1"	"676.89496"	"1352.78264"	"1352.78259"	"0.04"	"0.00003"	"7/68"	"7"	"68"	"1210203.94030762"	"HCD"	"MS2"	"0"	"97.9"	"100.000"	"84.1630"	"29205"	"29205"	"29196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.4"	""	"127.0"	""	"138.0"	""	"146.7"	""	"177.8"	"174.3"	""	"685"	"47"	"35.000"	"28.000"	"0.000759732273781574"	""	"0"	"0.0001935"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINEEYK"	"[R].vINEEYk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"Q71UF4"	"Histone-binding protein RBBP7 OS=Rattus norvegicus OX=10116 GN=Rbbp7 PE=2 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"676.89539"	"1352.78349"	"1352.78259"	"0.67"	"0.00045"	"12/58"	"12"	"58"	"1340510.30181885"	"HCD"	"MS2"	"42.30735"	"106.3"	"100.000"	"54.7419"	"17248"	"17248"	"17231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.1"	""	"121.1"	""	"119.8"	""	"164.2"	""	"231.7"	"228.9"	""	"686"	"30"	"35.000"	"28.000"	"0.032084414623261"	"21"	"0.001488"	"0.01274"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTLHNLR"	"[KR].eLQTLHNLR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9; Q6QLM7"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1; Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"451.59949"	"1352.78391"	"1352.78476"	"-0.63"	"-0.00029"	"7/82"	"7"	"82"	"4467464.93792725"	"HCD"	"MS2"	"32.46772"	"89.2"	"100.000"	"43.3734"	"12630"	"12630"	"12608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.5"	""	"96.7"	""	"133.5"	""	"143.5"	"0.6"	"173.0"	"166.5"	""	"686"	"52"	"35.000"	"28.000"	"0.000227140260769704"	"28"	"0"	"0.0001496"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQTLHNLR"	"[KR].eLQTLHNLR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9; Q6QLM7"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1; Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"3"	"3"	"0.7593"	"0.0000"	"1"	"1"	"1"	"451.59955"	"1352.78409"	"1352.78476"	"-0.50"	"-0.00022"	"7/82"	"7"	"82"	"4727684.64263916"	"HCD"	"MS2"	"34.31994"	"99.4"	"100.000"	"43.2034"	"12595"	"12595"	"12571"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.1"	""	"116.5"	""	"137.9"	""	"158.4"	""	"192.7"	"184.4"	""	"686"	"54"	"35.000"	"28.000"	"0.000136550759499849"	""	"9.9E-05"	"0.0004405"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIADAFTK"	"[K].eIADAFTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"676.89600"	"1352.78472"	"1352.78259"	"1.57"	"0.00106"	"14/68"	"14"	"68"	"298629.444946289"	"HCD"	"MS2"	"45.57202"	"26.3"	"100.000"	"83.8269"	"29041"	"29041"	"29023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.9"	""	"36.4"	""	"38.6"	""	"45.7"	""	"36.4"	"43.5"	""	"669"	"33"	"35.000"	"28.000"	"0.0159733542038498"	"23"	"0"	"0.0003543"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLMENLR"	"[K].yLGLmENLR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"677.37286"	"1353.73845"	"1353.73979"	"-0.99"	"-0.00067"	"7/68"	"7"	"68"	"408145.723999023"	"HCD"	"MS2"	"14.37832"	"24.2"	"100.000"	"80.9490"	"27880"	"27880"	"27859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"25.7"	""	"29.4"	""	"54.1"	""	"44.3"	"49.5"	""	"739"	"26"	"35.000"	"28.000"	"0.102003351787342"	"27"	"0.001162"	"0.009237"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLMENLR"	"[K].yLGLmENLR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"677.37299"	"1353.73870"	"1353.73979"	"-0.81"	"-0.00055"	"6/68"	"6"	"68"	"278894.511413574"	"HCD"	"MS2"	"22.381"	"22.7"	"100.000"	"80.6145"	"27744"	"27744"	"27721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.2"	""	"29.4"	""	"23.1"	""	"41.3"	""	"49.0"	"43.7"	""	"734"	"15"	"35.000"	"28.000"	"1.15788669677849"	"15"	"0.006033"	"0.07316"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLMENLR"	"[K].yLGLmENLR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"677.37366"	"1353.74004"	"1353.73979"	"0.18"	"0.00012"	"7/68"	"7"	"68"	"283669.807800293"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"81.2650"	"28008"	"28008"	"27982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.4"	""	"26.5"	""	"26.9"	""	"37.7"	"1.4"	"35.0"	"38.9"	""	"737"	"28"	"35.000"	"28.000"	"0.0633049240667572"	"22"	"0.0009352"	"0.008434"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGLMENLR"	"[K].yLGLmENLR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"Q63355"	"Unconventional myosin-Ic OS=Rattus norvegicus OX=10116 GN=Myo1c PE=1 SV=2"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"677.37378"	"1353.74028"	"1353.73979"	"0.36"	"0.00025"	"7/68"	"7"	"68"	"407868.496520996"	"HCD"	"MS2"	"5.479798"	"23.3"	"100.000"	"81.0529"	"27949"	"27949"	"27929"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"27.0"	""	"24.1"	""	"51.7"	""	"43.0"	"52.9"	""	"737"	"37"	"35.000"	"28.000"	"0.00695724812141984"	"28"	"0.002189"	"0.02046"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQTFADK"	"[R].sVQTFADk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"677.39240"	"1353.77751"	"1353.77784"	"-0.24"	"-0.00016"	"14/78"	"14"	"78"	"2892269.91674805"	"HCD"	"MS2"	"8.956691"	"232.0"	"100.000"	"55.1049"	"17430"	"17430"	"17410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"344.9"	""	"301.5"	""	"311.6"	""	"391.9"	""	"430.9"	"419.9"	""	"631"	"49"	"34.000"	"28.000"	"0.000409260059995438"	""	"9.9E-05"	"0.0005535"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQTFADK"	"[R].sVQTFADk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"677.39270"	"1353.77812"	"1353.77784"	"0.21"	"0.00014"	"14/78"	"14"	"78"	"2794261.48907471"	"HCD"	"MS2"	"4.687142"	"229.6"	"100.000"	"55.4819"	"17550"	"17550"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"338.2"	""	"290.0"	""	"320.6"	""	"383.2"	"0.7"	"404.4"	"437.7"	""	"654"	"47"	"35.000"	"28.000"	"0.000712111095559483"	"25"	"0.0001686"	"0.001265"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQIYTWDGR"	"[K].sQIYTWDGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"Q5U2Z5"	"Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Cmtr1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.85089"	"1354.69451"	"1354.69528"	"-0.57"	"-0.00039"	"5/90"	"5"	"90"	"174738.110778809"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"66.8143"	"22145"	"22145"	"22123"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"25.1"	""	"18.3"	""	"35.0"	""	"31.4"	"27.8"	""	"628"	"28"	"34.000"	"27.000"	"0.0533248506872988"	"14"	"0.0001991"	"0.004745"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPDENFK"	"[R].fPDENFk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"677.87408"	"1354.74089"	"1354.74072"	"0.12"	"0.00008"	"6/54"	"6"	"54"	"1174169.75073242"	"HCD"	"MS2"	"16.91115"	"109.1"	"100.000"	"84.3461"	"29252"	"29252"	"29241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.5"	""	"126.6"	""	"121.4"	""	"209.3"	""	"208.6"	"231.9"	""	"763"	"20"	"35.000"	"28.000"	"0.413518117699089"	"20"	"0.00296"	"0.03178"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTIEQYK"	"[R].dTIEQYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"677.88428"	"1354.76128"	"1354.76185"	"-0.42"	"-0.00029"	"8/58"	"8"	"58"	"780094.792663574"	"HCD"	"MS2"	"15.05148"	"66.9"	"100.000"	"54.2151"	"17034"	"17034"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.9"	""	"73.7"	""	"75.9"	""	"107.1"	""	"138.7"	"147.4"	""	"669"	"29"	"35.000"	"28.000"	"0.0425007038192257"	"25"	"0.001261"	"0.009584"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTIEQYK"	"[R].dTIEQYk.[G]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"677.88495"	"1354.76262"	"1354.76185"	"0.57"	"0.00038"	"8/58"	"8"	"58"	"706307.071716309"	"HCD"	"MS2"	"38.23743"	"62.0"	"100.000"	"53.8217"	"16907"	"16907"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.9"	""	"68.5"	""	"74.9"	""	"94.5"	""	"125.9"	"134.7"	""	"658"	"25"	"35.000"	"28.000"	"0.113291127221138"	"22"	"0.0009352"	"0.008023"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"677.90179"	"1354.79631"	"1354.79824"	"-1.42"	"-0.00096"	"6/68"	"6"	"68"	"470121.220825195"	"HCD"	"MS2"	"23.60753"	"34.2"	"100.000"	"52.3051"	"16288"	"16288"	"16262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"36.6"	""	"42.3"	""	"70.9"	"0.4"	"74.5"	"67.0"	""	"489"	"30"	"33.000"	"26.000"	"0.0245628560723067"	"19"	"0.002189"	"0.02019"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"677.90186"	"1354.79643"	"1354.79824"	"-1.33"	"-0.00090"	"6/68"	"6"	"68"	"477048.526916504"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"51.6517"	"15989"	"15989"	"15965"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"29.8"	""	"43.6"	""	"64.0"	"1.1"	"70.7"	"74.7"	""	"489"	"32"	"33.000"	"26.000"	"0.0169933445650461"	"20"	"0.00296"	"0.03162"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDYTTAK"	"[K].vVDYTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.90198"	"1354.79668"	"1354.79824"	"-1.15"	"-0.00078"	"12/62"	"12"	"62"	"2456916.11517334"	"HCD"	"MS2"	"0"	"169.1"	"100.000"	"57.1364"	"18249"	"18249"	"18231"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.0"	""	"216.7"	""	"221.1"	""	"266.2"	"0.6"	"327.0"	"338.9"	""	"489"	"32"	"33.000"	"26.000"	"0.0163410087845526"	"14"	"0.0001686"	"0.001894"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDYTTAK"	"[K].vVDYTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.90216"	"1354.79704"	"1354.79824"	"-0.88"	"-0.00060"	"12/62"	"12"	"62"	"826276.130126953"	"HCD"	"MS2"	"0"	"71.5"	"100.000"	"57.4515"	"18378"	"18378"	"18356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.3"	""	"88.7"	""	"96.6"	""	"109.0"	""	"134.7"	"155.6"	""	"489"	"30"	"33.000"	"26.000"	"0.0228706687329076"	"14"	"9.9E-05"	"0.0006656"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPPSPEK"	"[K].eLPPSPEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"677.90234"	"1354.79741"	"1354.79824"	"-0.61"	"-0.00041"	"6/68"	"6"	"68"	"484172.138427734"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"51.3407"	"15897"	"15897"	"15873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"39.6"	""	"37.9"	""	"72.3"	""	"70.9"	"72.3"	""	"487"	"34"	"33.000"	"26.000"	"0.0105803239585778"	"22"	"0.002559"	"0.02608"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDYTTAK"	"[K].vVDYTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"677.90247"	"1354.79766"	"1354.79824"	"-0.43"	"-0.00029"	"12/62"	"12"	"62"	"2402223.09259033"	"HCD"	"MS2"	"4.905095"	"178.5"	"100.000"	"57.4657"	"18348"	"18348"	"18330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.7"	""	"231.2"	""	"246.2"	""	"286.8"	""	"337.6"	"345.3"	""	"495"	"32"	"33.000"	"26.000"	"0.0139821901266045"	"22"	"0.0001686"	"0.001961"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDYTTAK"	"[K].vVDYTTAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"677.90253"	"1354.79778"	"1354.79824"	"-0.34"	"-0.00023"	"7/62"	"7"	"62"	"524437.689025879"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"57.7830"	"18478"	"18478"	"18455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"50.2"	""	"62.8"	""	"70.5"	"1.6"	"85.0"	"88.9"	""	"495"	"31"	"33.000"	"26.000"	"0.0192121161365601"	"14"	"9.9E-05"	"0.0008441"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDHVLGK"	"[K].eVDHVLGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"452.27499"	"1354.81043"	"1354.80947"	"0.71"	"0.00032"	"8/60"	"8"	"60"	"2060081.762146"	"HCD"	"MS2"	"32.54861"	"102.9"	"100.000"	"48.0232"	"14553"	"14553"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.9"	""	"126.2"	""	"126.6"	""	"173.9"	"0.5"	"208.7"	"200.8"	""	"449"	"14"	"33.000"	"26.000"	"0.940191553689727"	"18"	"0.00296"	"0.03166"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDHVLGK"	"[K].eVDHVLGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"452.27554"	"1354.81208"	"1354.80947"	"1.92"	"0.00087"	"7/60"	"7"	"60"	"1840938.22961426"	"HCD"	"MS2"	"40.60345"	"89.3"	"100.000"	"48.3777"	"14660"	"14660"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.3"	""	"114.8"	""	"106.8"	""	"154.5"	"0.2"	"171.6"	"189.9"	""	"438"	"18"	"33.000"	"26.000"	"0.38676228273027"	"22"	"0.001615"	"0.01453"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYFQNAQER"	"[K].aYFQNAQER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04638"	"Apolipoprotein A-II OS=Rattus norvegicus OX=10116 GN=Apoa2 PE=2 SV=1"	"P04638"	"Apolipoprotein A-II OS=Rattus norvegicus OX=10116 GN=Apoa2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"678.34912"	"1355.69097"	"1355.69053"	"0.32"	"0.00022"	"6/74"	"6"	"74"	"324494.821166992"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"39.7703"	"11169"	"11169"	"11146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"25.0"	""	"32.0"	""	"34.3"	""	"45.9"	"43.3"	""	"592"	"15"	"34.000"	"27.000"	"0.940354724912333"	"13"	"0.0001991"	"0.004177"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57941"	"1355.72367"	"1355.72691"	"-2.40"	"-0.00108"	"8/72"	"8"	"72"	"338114.919921875"	"HCD"	"MS2"	"42.7418"	"11.4"	"100.000"	"89.8776"	"31470"	"31470"	"31446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"13.9"	""	"15.8"	""	"17.8"	""	"22.1"	"25.4"	""	"699"	"11"	"35.000"	"28.000"	"2.53190368046209"	"13"	"0.004213"	"0.04757"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57941"	"1355.72367"	"1355.72691"	"-2.40"	"-0.00108"	"7/72"	"7"	"72"	"270829.180725098"	"HCD"	"MS2"	"40.7661"	"8.0"	"100.000"	"93.6391"	"33023"	"33023"	"32995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.2"	""	"11.6"	""	"9.8"	""	"10.1"	""	"11.6"	"18.1"	""	"699"	"10"	"35.000"	"28.000"	"3.87656597934209"	"13"	"0.004852"	"0.06017"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"452.57950"	"1355.72394"	"1355.72691"	"-2.19"	"-0.00099"	"5/72"	"5"	"72"	"1346968.22259521"	"HCD"	"MS2"	"25.14073"	"54.8"	"100.000"	"47.0525"	"14158"	"14158"	"14129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.2"	""	"57.0"	""	"67.2"	""	"122.0"	""	"113.8"	"111.0"	""	"699"	"3"	"35.000"	"28.000"	"16.5747573848455"	"13"	"0.007681"	"0.09794"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"452.57953"	"1355.72403"	"1355.72691"	"-2.13"	"-0.00096"	"5/72"	"5"	"72"	"206327.435913086"	"HCD"	"MS2"	"9.78763"	"6.1"	"100.000"	"105.4692"	"37765"	"37765"	"37747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.6"	""	"8.4"	""	"6.3"	""	"13.9"	""	"11.0"	"11.5"	""	"699"	"10"	"35.000"	"28.000"	"3.87656597934209"	"14"	"0.001951"	"0.01653"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"452.57959"	"1355.72422"	"1355.72691"	"-1.99"	"-0.00090"	"9/72"	"9"	"72"	"438116.54309082"	"HCD"	"MS2"	"21.03766"	"11.6"	"100.000"	"78.6374"	"26940"	"26940"	"26913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"14.2"	""	"19.2"	""	"17.2"	""	"24.4"	"23.4"	""	"699"	"17"	"35.000"	"28.000"	"0.622941379223107"	"21"	"0.001348"	"0.01113"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57962"	"1355.72431"	"1355.72691"	"-1.92"	"-0.00087"	"10/72"	"10"	"72"	"1500457.69482422"	"HCD"	"MS2"	"37.50537"	"25.8"	"100.000"	"62.6826"	"20502"	"20502"	"20483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.4"	""	"20.4"	""	"31.9"	""	"37.0"	""	"64.7"	"65.0"	""	"699"	"22"	"35.000"	"28.000"	"0.198814099329923"	"14"	"0.0001686"	"0.001607"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"452.57965"	"1355.72440"	"1355.72691"	"-1.86"	"-0.00084"	"9/72"	"9"	"72"	"950906.942749023"	"HCD"	"MS2"	"9.572307"	"24.1"	"100.000"	"69.4281"	"23206"	"23206"	"23184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	"1.8"	"32.1"	""	"34.7"	""	"39.4"	"0.5"	"39.0"	"46.4"	""	"699"	"18"	"35.000"	"28.000"	"0.594904398684035"	"17"	"0.0001991"	"0.00518"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57968"	"1355.72449"	"1355.72691"	"-1.79"	"-0.00081"	"10/72"	"10"	"72"	"389890.328186035"	"HCD"	"MS2"	"15.72274"	"6.2"	"100.000"	"116.2670"	"41897"	"41897"	"41893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"3.7"	""	"8.6"	""	"11.2"	""	"14.0"	"15.3"	""	"699"	"22"	"35.000"	"28.000"	"0.241794924336168"	"14"	"9.9E-05"	"0.000773"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57968"	"1355.72449"	"1355.72691"	"-1.79"	"-0.00081"	"9/72"	"9"	"72"	"1427151.60400391"	"HCD"	"MS2"	"19.87084"	"26.2"	"100.000"	"63.6593"	"20899"	"20899"	"20873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"29.6"	""	"35.4"	""	"48.1"	"0.2"	"47.1"	"50.5"	""	"699"	"21"	"35.000"	"28.000"	"0.288036271197044"	"14"	"0.0001991"	"0.002708"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"452.57971"	"1355.72458"	"1355.72691"	"-1.72"	"-0.00078"	"9/72"	"9"	"72"	"375334.191040039"	"HCD"	"MS2"	"33.01468"	"8.0"	"100.000"	"114.0004"	"41126"	"41126"	"41097"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.8"	""	"9.1"	""	"10.2"	""	"13.6"	""	"18.8"	"16.5"	""	"699"	"23"	"35.000"	"28.000"	"0.18554411325873"	"17"	"0.002084"	"0.01877"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57971"	"1355.72458"	"1355.72691"	"-1.72"	"-0.00078"	"7/72"	"7"	"72"	"247086.529174805"	"HCD"	"MS2"	"28.74969"	"5.6"	"100.000"	"109.6505"	"39382"	"39382"	"39363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.7"	""	"4.3"	""	"3.5"	""	"10.2"	""	"14.4"	"14.2"	""	"699"	"15"	"35.000"	"28.000"	"1.04579649049456"	"13"	"0.0001991"	"0.004901"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"452.57971"	"1355.72458"	"1355.72691"	"-1.72"	"-0.00078"	"5/72"	"5"	"72"	"317023.210510254"	"HCD"	"MS2"	"35.1548"	"9.0"	"100.000"	"105.1770"	"37647"	"37647"	"37630"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	"2.2"	"14.7"	""	"6.5"	""	"14.3"	""	"23.2"	"15.8"	""	"699"	"5"	"35.000"	"28.000"	"11.7070420985661"	"13"	"0.00455"	"0.05326"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"452.57974"	"1355.72467"	"1355.72691"	"-1.65"	"-0.00075"	"7/72"	"7"	"72"	"430174.741577148"	"HCD"	"MS2"	"20.8025"	"7.2"	"100.000"	"116.4526"	"41943"	"41943"	"41934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"8.7"	""	"12.9"	""	"11.2"	""	"13.0"	"13.1"	""	"699"	"27"	"35.000"	"28.000"	"0.0627259402577968"	"17"	"0.0001991"	"0.004107"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"452.57974"	"1355.72467"	"1355.72691"	"-1.65"	"-0.00075"	"6/72"	"6"	"72"	"848889.299072266"	"HCD"	"MS2"	"7.27073"	"15.7"	"100.000"	"67.0328"	"22234"	"22234"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"19.7"	""	"19.5"	""	"23.7"	""	"35.6"	"35.0"	""	"699"	"32"	"35.000"	"28.000"	"0.0239578135145205"	"17"	"0.0001686"	"0.001047"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57977"	"1355.72477"	"1355.72691"	"-1.59"	"-0.00072"	"5/72"	"5"	"72"	"283081.034790039"	"HCD"	"MS2"	"14.32846"	"9.3"	"100.000"	"94.2815"	"33248"	"33248"	"33227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"6.0"	""	"11.7"	""	"17.5"	""	"16.0"	"22.8"	""	"699"	"9"	"35.000"	"28.000"	"4.04061228646139"	"13"	"0.002922"	"0.03125"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"452.57977"	"1355.72477"	"1355.72691"	"-1.59"	"-0.00072"	"8/72"	"8"	"72"	"306148.656982422"	"HCD"	"MS2"	"10.40147"	"8.2"	"100.000"	"113.6716"	"41006"	"41006"	"40975"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.4"	""	"7.1"	""	"14.8"	""	"14.1"	""	"17.8"	"17.0"	""	"699"	"13"	"35.000"	"28.000"	"1.65366365007037"	"17"	"0.001615"	"0.01439"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57977"	"1355.72477"	"1355.72691"	"-1.59"	"-0.00072"	"9/72"	"9"	"72"	"444255.346923828"	"HCD"	"MS2"	"16.13035"	"7.8"	"100.000"	"116.1880"	"41872"	"41872"	"41867"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.0"	""	"7.5"	""	"10.9"	""	"12.6"	""	"18.8"	"16.1"	""	"699"	"21"	"35.000"	"28.000"	"0.262088026161693"	"14"	"0.0001991"	"0.005033"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57977"	"1355.72477"	"1355.72691"	"-1.59"	"-0.00072"	"9/72"	"9"	"72"	"1497802.0614624"	"HCD"	"MS2"	"8.540948"	"29.5"	"100.000"	"63.7088"	"20887"	"20887"	"20866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.8"	"2.4"	"31.5"	""	"40.3"	""	"48.6"	""	"64.5"	"58.9"	""	"699"	"19"	"35.000"	"28.000"	"0.459671078851187"	"14"	"0.0001991"	"0.003932"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57980"	"1355.72486"	"1355.72691"	"-1.52"	"-0.00069"	"8/72"	"8"	"72"	"234943.608764648"	"HCD"	"MS2"	"25.16848"	"6.7"	"100.000"	"107.9916"	"38751"	"38751"	"38741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.4"	""	"8.1"	""	"7.7"	""	"15.4"	""	"13.9"	"11.1"	""	"699"	"12"	"35.000"	"28.000"	"2.38477373602513"	"13"	"0.001348"	"0.01104"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57980"	"1355.72486"	"1355.72691"	"-1.52"	"-0.00069"	"9/72"	"9"	"72"	"1305083.7255249"	"HCD"	"MS2"	"44.91144"	"23.9"	"100.000"	"64.7147"	"21327"	"21327"	"21307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.7"	""	"21.6"	""	"32.5"	""	"37.1"	""	"59.7"	"54.9"	""	"699"	"18"	"35.000"	"28.000"	"0.572067374239019"	"14"	"0.0001991"	"0.005172"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57983"	"1355.72495"	"1355.72691"	"-1.45"	"-0.00066"	"7/72"	"7"	"72"	"378062.451049805"	"HCD"	"MS2"	"20.72584"	"5.5"	"100.000"	"118.7191"	"42383"	"42383"	"42380"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.0"	""	"4.5"	""	"6.4"	""	"10.8"	""	"12.0"	"11.3"	""	"703"	"10"	"35.000"	"28.000"	"3.34137584970183"	"13"	"0.002525"	"0.02397"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"452.57983"	"1355.72495"	"1355.72691"	"-1.45"	"-0.00066"	"7/72"	"7"	"72"	"2220922.37475586"	"HCD"	"MS2"	"5.746758"	"27.6"	"100.000"	"60.4372"	"19559"	"19559"	"19540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"28.6"	""	"29.5"	""	"52.5"	""	"57.1"	"65.3"	""	"703"	"34"	"35.000"	"28.000"	"0.0152028611608805"	"19"	"0.0001686"	"0.001029"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36615"	"1355.72502"	"1355.72691"	"-1.40"	"-0.00095"	"6/72"	"6"	"72"	"8831873.37335205"	"HCD"	"MS2"	"0"	"268.8"	"94.221"	"56.7714"	"18102"	"18102"	"18085"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.7"	""	"216.7"	""	"281.6"	""	"531.4"	""	"627.6"	"619.5"	""	"716"	"35"	"35.000"	"28.000"	"0.0107123073990573"	"26"	"9.9E-05"	"0.0006783"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"678.36615"	"1355.72502"	"1355.72691"	"-1.40"	"-0.00095"	"6/72"	"6"	"72"	"40135756.2995605"	"HCD"	"MS2"	"0"	"350.1"	"28.377"	"55.5775"	"17623"	"17623"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"366.9"	""	"286.5"	""	"372.1"	""	"710.4"	"3.0"	"826.2"	"767.5"	""	"716"	"34"	"35.000"	"28.000"	"0.0146853068869205"	"25"	"0.0001686"	"0.001658"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57986"	"1355.72504"	"1355.72691"	"-1.38"	"-0.00062"	"7/72"	"7"	"72"	"557890.872619629"	"HCD"	"MS2"	"39.46388"	"14.1"	"100.000"	"77.5529"	"26499"	"26499"	"26478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"15.6"	""	"13.6"	""	"27.5"	"1.0"	"26.8"	"32.6"	""	"716"	"11"	"35.000"	"28.000"	"2.7408358527423"	"13"	"0.002035"	"0.01764"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"452.57986"	"1355.72504"	"1355.72691"	"-1.38"	"-0.00062"	"6/72"	"6"	"72"	"1386325.16595459"	"HCD"	"MS2"	"53.75273"	"22.1"	"100.000"	"66.6560"	"22081"	"22081"	"22063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	"3.6"	"20.7"	""	"26.2"	""	"43.1"	""	"41.0"	"49.2"	""	"716"	"28"	"35.000"	"28.000"	"0.0519855959096412"	"17"	"9.9E-05"	"0.0008892"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57986"	"1355.72504"	"1355.72691"	"-1.38"	"-0.00062"	"9/72"	"9"	"72"	"2893116.07293701"	"HCD"	"MS2"	"25.39312"	"36.4"	"100.000"	"59.7668"	"19320"	"19320"	"19303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.6"	"3.7"	"33.6"	""	"35.8"	""	"59.2"	""	"87.2"	"92.7"	""	"716"	"26"	"35.000"	"28.000"	"0.0845051207478647"	"14"	"0.0001991"	"0.002191"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"452.57990"	"1355.72513"	"1355.72691"	"-1.32"	"-0.00059"	"8/72"	"8"	"72"	"236749.020996094"	"HCD"	"MS2"	"40.56844"	"5.6"	"100.000"	"107.7017"	"38662"	"38662"	"38649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.3"	""	"5.4"	""	"9.4"	""	"11.2"	""	"11.7"	"8.3"	""	"715"	"13"	"35.000"	"28.000"	"1.88919177509627"	"17"	"0.001596"	"0.01304"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57990"	"1355.72513"	"1355.72691"	"-1.32"	"-0.00059"	"4/72"	"4"	"72"	"239643.135437012"	"HCD"	"MS2"	"38.9474"	"5.4"	"100.000"	"109.0651"	"39149"	"39149"	"39140"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.0"	""	"4.8"	""	"6.8"	""	"10.6"	""	"14.1"	"11.5"	""	"715"	"1"	"35.000"	"28.000"	"28.6599907661095"	"13"	"0.009411"	"0.1238"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57990"	"1355.72513"	"1355.72691"	"-1.32"	"-0.00059"	"10/72"	"10"	"72"	"377280.916137695"	"HCD"	"MS2"	"15.59677"	"6.6"	"100.000"	"116.7813"	"42019"	"42019"	"42017"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"8.9"	""	"8.7"	""	"12.5"	""	"15.7"	"12.4"	""	"715"	"22"	"35.000"	"28.000"	"0.221960679737248"	"14"	"9.9E-05"	"0.0007611"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"452.57990"	"1355.72513"	"1355.72691"	"-1.32"	"-0.00059"	"9/72"	"9"	"72"	"397507.829833984"	"HCD"	"MS2"	"21.43721"	"10.6"	"100.000"	"112.9779"	"40712"	"40712"	"40681"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"12.3"	""	"12.5"	""	"20.0"	""	"23.5"	"22.3"	""	"715"	"23"	"35.000"	"28.000"	"0.191106758484417"	"16"	"0.001615"	"0.01484"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"452.57990"	"1355.72513"	"1355.72691"	"-1.32"	"-0.00059"	"7/72"	"7"	"72"	"853289.943481445"	"HCD"	"MS2"	"24.47331"	"18.1"	"100.000"	"69.8491"	"23411"	"23411"	"23388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"20.2"	""	"23.7"	""	"34.3"	""	"37.5"	"41.7"	""	"715"	"24"	"35.000"	"28.000"	"0.144969301422797"	"19"	"0.0001991"	"0.004688"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"452.57993"	"1355.72522"	"1355.72691"	"-1.25"	"-0.00056"	"4/72"	"4"	"72"	"273224.581115723"	"HCD"	"MS2"	"31.19035"	"9.6"	"100.000"	"99.3899"	"35316"	"35316"	"35294"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"11.9"	""	"12.5"	""	"17.1"	""	"16.9"	"23.0"	""	"715"	"11"	"35.000"	"28.000"	"3.02187187144803"	"20"	"0.002588"	"0.02632"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"452.57993"	"1355.72522"	"1355.72691"	"-1.25"	"-0.00056"	"10/72"	"10"	"72"	"530852.817626953"	"HCD"	"MS2"	"44.14051"	"12.5"	"100.000"	"74.0697"	"25120"	"25120"	"25096"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"14.4"	""	"15.4"	""	"22.6"	""	"26.4"	"24.1"	""	"715"	"25"	"35.000"	"28.000"	"0.121416034951071"	"18"	"9.9E-05"	"0.0007754"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"452.57993"	"1355.72522"	"1355.72691"	"-1.25"	"-0.00056"	"9/72"	"9"	"72"	"452915.915588379"	"HCD"	"MS2"	"21.07197"	"7.5"	"100.000"	"115.3025"	"41623"	"41623"	"41617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.6"	""	"8.6"	""	"8.3"	""	"13.9"	""	"16.4"	"17.0"	""	"715"	"19"	"35.000"	"28.000"	"0.435788781615639"	"15"	"0.0001686"	"0.001941"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57993"	"1355.72522"	"1355.72691"	"-1.25"	"-0.00056"	"5/72"	"5"	"72"	"498597.559631348"	"HCD"	"MS2"	"17.23249"	"6.9"	"100.000"	"119.9327"	"42604"	"42604"	"42601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.0"	""	"7.9"	""	"5.3"	""	"15.9"	""	"15.3"	"14.6"	""	"715"	"15"	"35.000"	"28.000"	"1.15684732352342"	"13"	"0.0001686"	"0.001781"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"452.57993"	"1355.72522"	"1355.72691"	"-1.25"	"-0.00056"	"6/72"	"6"	"72"	"1367435.86578369"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"66.6916"	"22128"	"22128"	"22114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"17.2"	""	"32.5"	""	"37.5"	"1.0"	"45.1"	"52.7"	""	"715"	"30"	"35.000"	"28.000"	"0.0401121597412952"	"17"	"0.0001686"	"0.001911"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"678.36627"	"1355.72527"	"1355.72691"	"-1.22"	"-0.00082"	"6/72"	"6"	"72"	"3624213.16040039"	"HCD"	"MS2"	"27.4505"	"182.0"	"100.000"	"57.0654"	"18220"	"18220"	"18209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.5"	""	"200.7"	""	"239.3"	""	"324.2"	""	"365.5"	"376.3"	""	"715"	"15"	"35.000"	"28.000"	"1.10478061712361"	"19"	"0.0001686"	"0.00196"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"9/72"	"9"	"72"	"326060.683349609"	"HCD"	"MS2"	"11.59359"	"6.1"	"100.000"	"114.4959"	"41340"	"41340"	"41310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"5.1"	""	"9.5"	""	"13.3"	""	"10.1"	"13.6"	""	"715"	"26"	"35.000"	"28.000"	"0.0986906583598773"	"14"	"9.9E-05"	"0.0009585"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"7/72"	"7"	"72"	"219816.36907959"	"HCD"	"MS2"	"38.10441"	"6.6"	"100.000"	"108.3807"	"38915"	"38915"	"38908"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"5.9"	""	"7.3"	""	"11.3"	""	"17.5"	"14.3"	""	"715"	"7"	"35.000"	"28.000"	"6.50543056953069"	"13"	"0.003568"	"0.03971"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"7/72"	"7"	"72"	"297950.256835938"	"HCD"	"MS2"	"35.04488"	"7.7"	"100.000"	"91.1320"	"31976"	"31976"	"31951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.9"	""	"7.8"	""	"11.1"	""	"12.9"	""	"16.1"	"17.5"	""	"715"	"16"	"35.000"	"28.000"	"0.931699894124604"	"17"	"0.001488"	"0.01203"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"6/72"	"6"	"72"	"313343.544067383"	"HCD"	"MS2"	"14.82887"	"9.6"	"100.000"	"94.7976"	"33458"	"33458"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"11.3"	""	"14.0"	""	"17.1"	""	"17.9"	"21.6"	""	"715"	"7"	"35.000"	"28.000"	"7.3160395762907"	"13"	"0.009275"	"0.12"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"8/72"	"8"	"72"	"403769.968933105"	"HCD"	"MS2"	"16.71611"	"6.0"	"100.000"	"119.4780"	"42513"	"42513"	"42510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"4.1"	""	"8.1"	""	"13.2"	""	"10.2"	"13.6"	""	"715"	"14"	"35.000"	"28.000"	"1.52151432695313"	"13"	"0.002189"	"0.02054"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"10/72"	"10"	"72"	"817853.205322266"	"HCD"	"MS2"	"12.00442"	"15.8"	"100.000"	"68.4011"	"22789"	"22789"	"22764"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"18.6"	""	"17.8"	""	"23.8"	""	"33.9"	"38.2"	""	"715"	"22"	"35.000"	"28.000"	"0.203364922776673"	"18"	"0.0001991"	"0.002838"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"9/72"	"9"	"72"	"807551.125976563"	"HCD"	"MS2"	"21.21527"	"18.7"	"100.000"	"69.5242"	"23279"	"23279"	"23259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"19.9"	""	"28.6"	""	"33.9"	""	"36.4"	"35.2"	""	"715"	"19"	"35.000"	"28.000"	"0.453185542044179"	"19"	"0.0001991"	"0.003722"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"452.57996"	"1355.72531"	"1355.72691"	"-1.18"	"-0.00053"	"10/72"	"10"	"72"	"1295227.8237915"	"HCD"	"MS2"	"16.98632"	"22.3"	"100.000"	"63.3532"	"20774"	"20774"	"20750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"22.0"	""	"21.9"	""	"46.4"	""	"48.3"	"51.4"	""	"715"	"31"	"35.000"	"28.000"	"0.0258985855726809"	"18"	"9.9E-05"	"0.000932"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36633"	"1355.72539"	"1355.72691"	"-1.13"	"-0.00076"	"6/72"	"6"	"72"	"17264057.9215088"	"HCD"	"MS2"	"0"	"205.3"	"55.438"	"56.4666"	"17979"	"17979"	"17968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.6"	""	"186.6"	""	"208.2"	""	"414.2"	"0.0"	"473.8"	"463.0"	""	"715"	"35"	"35.000"	"28.000"	"0.0105748945679218"	"26"	"0.0001686"	"0.001296"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"678.36633"	"1355.72539"	"1355.72691"	"-1.13"	"-0.00076"	"6/72"	"6"	"72"	"44860029.9333496"	"HCD"	"MS2"	"0"	"342.1"	"25.881"	"55.9317"	"17732"	"17732"	"17721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"357.8"	""	"286.6"	""	"347.6"	""	"687.7"	"0.6"	"793.4"	"783.4"	""	"715"	"34"	"35.000"	"28.000"	"0.0148688043251613"	"25"	"0.0001686"	"0.001959"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"5/72"	"5"	"72"	"320785.204956055"	"HCD"	"MS2"	"30.97089"	"9.8"	"100.000"	"95.1504"	"33601"	"33601"	"33577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.8"	""	"13.9"	""	"13.3"	""	"17.5"	""	"18.1"	"16.5"	""	"715"	"5"	"35.000"	"28.000"	"11.2532002229122"	"13"	"0.003786"	"0.04045"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"5/72"	"5"	"72"	"234484.844726563"	"HCD"	"MS2"	"34.62862"	"6.6"	"100.000"	"105.8904"	"37952"	"37952"	"37928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.8"	""	"7.2"	""	"7.1"	""	"13.4"	""	"13.5"	"16.4"	""	"715"	"5"	"35.000"	"28.000"	"11.8107110920661"	"13"	"0.006577"	"0.0814"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"7/72"	"7"	"72"	"293549.055480957"	"HCD"	"MS2"	"46.00294"	"8.1"	"100.000"	"106.6535"	"38234"	"38234"	"38211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"7.1"	""	"13.9"	""	"15.5"	""	"13.4"	"17.3"	""	"715"	"8"	"35.000"	"28.000"	"6.2413141966908"	"13"	"0.002035"	"0.01824"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"4/72"	"4"	"72"	"387000.592895508"	"HCD"	"MS2"	"4.238805"	"10.6"	"100.000"	"74.7576"	"25368"	"25368"	"25349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"9.3"	""	"15.4"	""	"17.6"	""	"20.0"	"24.1"	""	"715"	"9"	"35.000"	"28.000"	"4.96908065658773"	"15"	"0.004234"	"0.04854"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"7/72"	"7"	"72"	"548829.630615234"	"HCD"	"MS2"	"41.32919"	"6.4"	"100.000"	"114.7929"	"41444"	"41444"	"41432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.2"	""	"5.1"	""	"5.6"	""	"13.5"	""	"15.5"	"15.6"	""	"715"	"14"	"35.000"	"28.000"	"1.43971339771352"	"15"	"0.001999"	"0.01746"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"5/72"	"5"	"72"	"1264293.81359863"	"HCD"	"MS2"	"24.0847"	"48.0"	"100.000"	"47.3287"	"14232"	"14232"	"14212"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"51.3"	""	"53.8"	""	"100.4"	"0.3"	"104.1"	"96.4"	""	"715"	"8"	"35.000"	"28.000"	"5.61404702549245"	"13"	"0.002711"	"0.02849"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"452.57999"	"1355.72541"	"1355.72691"	"-1.11"	"-0.00050"	"7/72"	"7"	"72"	"4339138.75878906"	"HCD"	"MS2"	"43.61319"	"42.2"	"100.000"	"59.3919"	"19134"	"19134"	"19114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.7"	"6.7"	"34.5"	""	"48.7"	""	"75.2"	"1.3"	"96.3"	"98.0"	""	"715"	"42"	"35.000"	"28.000"	"0.00201500461957778"	"20"	"9.9E-05"	"0.0005558"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36639"	"1355.72551"	"1355.72691"	"-1.04"	"-0.00070"	"6/72"	"6"	"72"	"25571043.7937012"	"HCD"	"MS2"	"0"	"268.5"	"50.519"	"56.4886"	"17954"	"17954"	"17941"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.7"	""	"227.7"	""	"258.5"	""	"551.4"	"0.6"	"645.4"	"607.5"	""	"715"	"35"	"35.000"	"28.000"	"0.0108711639667927"	"26"	"0.0001686"	"0.001479"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"8/72"	"8"	"72"	"331439.987060547"	"HCD"	"MS2"	"20.3134"	"7.5"	"100.000"	"114.1647"	"41206"	"41206"	"41181"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.3"	""	"8.0"	""	"11.2"	""	"14.7"	""	"14.9"	"14.1"	""	"715"	"14"	"35.000"	"28.000"	"1.46647966817712"	"14"	"0.004819"	"0.05747"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"9/72"	"9"	"72"	"420768.65637207"	"HCD"	"MS2"	"16.79676"	"7.0"	"100.000"	"117.8909"	"42262"	"42262"	"42259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.6"	""	"9.7"	""	"8.7"	""	"13.1"	""	"12.3"	"15.1"	""	"715"	"18"	"35.000"	"28.000"	"0.563996028917517"	"14"	"0.0003938"	"0.00636"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"8/72"	"8"	"72"	"406883.755859375"	"HCD"	"MS2"	"36.91434"	"6.5"	"100.000"	"115.6776"	"41735"	"41735"	"41731"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"6.6"	""	"5.9"	""	"12.5"	""	"14.2"	"16.0"	""	"715"	"19"	"35.000"	"28.000"	"0.494624980482411"	"14"	"0.001718"	"0.015"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"9/72"	"9"	"72"	"397608.007080078"	"HCD"	"MS2"	"14.93494"	"6.6"	"100.000"	"117.6976"	"42215"	"42215"	"42213"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"5.1"	""	"12.1"	""	"10.6"	""	"15.6"	"11.2"	""	"715"	"21"	"35.000"	"28.000"	"0.29941671836036"	"14"	"0.0001991"	"0.005292"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"6/72"	"6"	"72"	"401288.065551758"	"HCD"	"MS2"	"21.44336"	"5.6"	"100.000"	"119.2269"	"42474"	"42474"	"42472"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.9"	""	"5.5"	""	"4.6"	""	"13.2"	""	"13.9"	"12.1"	""	"715"	"14"	"35.000"	"28.000"	"1.41995978935325"	"13"	"0.002462"	"0.02327"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"7/72"	"7"	"72"	"431173.487915039"	"HCD"	"MS2"	"28.03898"	"6.0"	"100.000"	"115.3988"	"41665"	"41665"	"41661"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"7.6"	""	"6.4"	""	"8.4"	""	"10.9"	"15.1"	""	"715"	"10"	"35.000"	"28.000"	"3.20830794034017"	"13"	"0.001261"	"0.0097"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"8/72"	"8"	"72"	"448259.878845215"	"HCD"	"MS2"	"21.14444"	"5.4"	"100.000"	"119.7381"	"42550"	"42550"	"42548"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.8"	""	"6.9"	""	"5.6"	""	"9.8"	""	"8.3"	"15.5"	""	"715"	"13"	"35.000"	"28.000"	"1.80001467641676"	"13"	"0.002035"	"0.01846"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"9/72"	"9"	"72"	"1587120.02825928"	"HCD"	"MS2"	"36.66256"	"22.9"	"100.000"	"62.2013"	"20306"	"20306"	"20281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.9"	"3.1"	"18.4"	""	"20.1"	""	"39.8"	"0.3"	"54.8"	"56.6"	""	"715"	"22"	"35.000"	"28.000"	"0.21690823782789"	"14"	"0.0001991"	"0.003214"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"452.58002"	"1355.72550"	"1355.72691"	"-1.05"	"-0.00047"	"7/72"	"7"	"72"	"2863676.76879883"	"HCD"	"MS2"	"9.440182"	"53.3"	"100.000"	"60.5753"	"19648"	"19648"	"19628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.8"	""	"46.4"	""	"60.7"	""	"85.2"	""	"165.4"	"110.3"	""	"715"	"30"	"35.000"	"28.000"	"0.03575"	"19"	"9.9E-05"	"0.000925"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"9/72"	"9"	"72"	"398173.178955078"	"HCD"	"MS2"	"17.85469"	"6.5"	"100.000"	"116.0142"	"41838"	"41838"	"41834"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"5.2"	""	"7.7"	""	"10.6"	""	"16.8"	"11.3"	""	"715"	"22"	"35.000"	"28.000"	"0.23838341999387"	"14"	"9.9E-05"	"0.0009078"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"5/72"	"5"	"72"	"426486.989929199"	"HCD"	"MS2"	"11.40433"	"8.2"	"100.000"	"116.7093"	"42002"	"42002"	"42000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.6"	""	"9.6"	""	"10.9"	""	"13.6"	""	"18.2"	"15.1"	""	"715"	"17"	"35.000"	"28.000"	"0.671855762007168"	"14"	"0.0001991"	"0.005158"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"8/72"	"8"	"72"	"447051.71270752"	"HCD"	"MS2"	"9.24841"	"6.9"	"100.000"	"117.3768"	"42154"	"42154"	"42151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.3"	""	"10.0"	""	"7.7"	""	"14.3"	""	"12.9"	"14.8"	""	"715"	"24"	"35.000"	"28.000"	"0.136545076825317"	"14"	"0.0001991"	"0.005462"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"8/72"	"8"	"72"	"436301.658325195"	"HCD"	"MS2"	"16.73703"	"5.8"	"100.000"	"118.4069"	"42342"	"42342"	"42338"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"3.4"	""	"5.2"	""	"11.8"	""	"12.8"	"13.4"	""	"715"	"14"	"35.000"	"28.000"	"1.56774724454557"	"13"	"0.001999"	"0.01762"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"9/72"	"9"	"72"	"522959.889953613"	"HCD"	"MS2"	"46.63955"	"6.3"	"100.000"	"114.8788"	"41490"	"41490"	"41476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"3.3"	""	"10.1"	""	"8.6"	""	"15.7"	"12.3"	""	"715"	"18"	"35.000"	"28.000"	"0.526351719619697"	"15"	"0.0001991"	"0.00262"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"7/72"	"7"	"72"	"412152.169189453"	"HCD"	"MS2"	"62.32427"	"12.0"	"100.000"	"78.7456"	"27011"	"27011"	"26983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"14.7"	""	"22.9"	""	"22.4"	""	"21.4"	"21.4"	""	"715"	"9"	"35.000"	"28.000"	"4.73452098832092"	"20"	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"8/72"	"8"	"72"	"527470.534851074"	"HCD"	"MS2"	"27.14561"	"11.5"	"100.000"	"75.0895"	"25503"	"25503"	"25476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"13.8"	""	"16.7"	""	"17.3"	"2.4"	"23.6"	"23.7"	""	"715"	"21"	"35.000"	"28.000"	"0.312806699643808"	"14"	"0.0001686"	"0.001245"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"9/72"	"9"	"72"	"558391.213439941"	"HCD"	"MS2"	"30.00511"	"12.9"	"100.000"	"74.4394"	"25240"	"25240"	"25224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"20.0"	""	"14.3"	""	"18.6"	"1.0"	"26.2"	"27.1"	""	"715"	"17"	"35.000"	"28.000"	"0.800342807038181"	"17"	"0.0001991"	"0.004343"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"452.58005"	"1355.72559"	"1355.72691"	"-0.98"	"-0.00044"	"6/72"	"6"	"72"	"12152198.8482056"	"HCD"	"MS2"	"3.950025"	"88.0"	"93.296"	"57.4378"	"18373"	"18373"	"18356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.9"	"11.9"	"92.4"	""	"93.2"	""	"164.2"	""	"201.8"	"182.6"	""	"715"	"33"	"35.000"	"28.000"	"0.0163033197452588"	"24"	"0.0001991"	"0.002983"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"678.36646"	"1355.72563"	"1355.72691"	"-0.95"	"-0.00064"	"6/72"	"6"	"72"	"13668257.6213379"	"HCD"	"MS2"	"5.684133"	"449.8"	"100.000"	"55.2954"	"17508"	"17508"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"473.9"	""	"397.0"	""	"472.7"	""	"896.0"	""	"1023.0"	"1018.0"	""	"718"	"34"	"35.000"	"28.000"	"0.0153848918822681"	"25"	"9.9E-05"	"0.0008605"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"4/72"	"4"	"72"	"219369.555603027"	"HCD"	"MS2"	"40.64369"	"7.4"	"100.000"	"104.6880"	"37474"	"37474"	"37453"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"8.7"	""	"9.6"	""	"14.8"	""	"15.6"	"14.2"	""	"718"	"9"	"35.000"	"28.000"	"4.56136103769866"	"19"	"0.004213"	"0.04642"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"6/72"	"6"	"72"	"235845.660339355"	"HCD"	"MS2"	"39.73854"	"5.5"	"100.000"	"107.3740"	"38538"	"38538"	"38517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.9"	""	"9.7"	""	"4.4"	""	"12.9"	""	"11.8"	"9.4"	""	"718"	"9"	"35.000"	"28.000"	"4.80943930785911"	"13"	"0.004852"	"0.05921"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"9/72"	"9"	"72"	"409179.40423584"	"HCD"	"MS2"	"21.33241"	"5.6"	"100.000"	"117.4462"	"42165"	"42165"	"42163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.5"	""	"3.0"	""	"6.9"	""	"12.5"	""	"10.2"	"13.7"	""	"718"	"15"	"35.000"	"28.000"	"1.14576208998117"	"13"	"0.0001991"	"0.003108"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"7/72"	"7"	"72"	"318089.370422363"	"HCD"	"MS2"	"48.73473"	"7.1"	"100.000"	"107.0025"	"38374"	"38374"	"38358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.7"	""	"9.9"	""	"7.7"	""	"14.0"	""	"14.3"	"12.9"	""	"718"	"14"	"35.000"	"28.000"	"1.4490869607537"	"13"	"0.004392"	"0.05229"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"8/72"	"8"	"72"	"323242.117675781"	"HCD"	"MS2"	"41.69825"	"7.3"	"100.000"	"90.5921"	"31758"	"31758"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.1"	""	"7.3"	""	"11.9"	""	"11.4"	""	"18.7"	"16.8"	""	"718"	"12"	"35.000"	"28.000"	"2.41042958200417"	"15"	"0.00307"	"0.03375"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"10/72"	"10"	"72"	"901665.58605957"	"HCD"	"MS2"	"72.12538"	"29.9"	"100.000"	"69.1973"	"23146"	"23146"	"23120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"43.0"	""	"41.1"	""	"52.6"	"0.3"	"50.1"	"49.4"	""	"718"	"13"	"35.000"	"28.000"	"1.66760983804967"	"17"	"0.0001991"	"0.002009"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"7/72"	"7"	"72"	"841426.016174316"	"HCD"	"MS2"	"30.80567"	"17.9"	"100.000"	"69.8289"	"23369"	"23369"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.6"	""	"20.2"	""	"21.0"	""	"34.0"	""	"39.9"	"37.2"	""	"718"	"24"	"35.000"	"28.000"	"0.140635333881694"	"20"	"0.0001686"	"0.001604"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"452.58008"	"1355.72568"	"1355.72691"	"-0.91"	"-0.00041"	"7/72"	"7"	"72"	"5718515.19927979"	"HCD"	"MS2"	"4.474741"	"55.6"	"100.000"	"58.6462"	"18830"	"18830"	"18813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.7"	"9.9"	"42.6"	""	"57.6"	""	"114.4"	"0.2"	"119.3"	"124.9"	""	"718"	"38"	"35.000"	"28.000"	"0.00631094577411171"	"16"	"0.0001686"	"0.001066"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36652"	"1355.72576"	"1355.72691"	"-0.86"	"-0.00058"	"6/72"	"6"	"72"	"14817777.5944214"	"HCD"	"MS2"	"0"	"251.5"	"87.156"	"56.8138"	"18083"	"18083"	"18069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.9"	""	"227.5"	""	"251.1"	""	"494.6"	"4.3"	"599.2"	"563.4"	""	"718"	"35"	"35.000"	"28.000"	"0.0106437446883924"	"26"	"9.9E-05"	"0.0009979"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36652"	"1355.72576"	"1355.72691"	"-0.86"	"-0.00058"	"6/72"	"6"	"72"	"36114834.4523926"	"HCD"	"MS2"	"0"	"418.9"	"37.463"	"56.2021"	"17838"	"17838"	"17833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"424.0"	""	"331.1"	""	"430.1"	""	"853.4"	"2.1"	"994.1"	"954.1"	""	"718"	"35"	"35.000"	"28.000"	"0.0106928739816508"	"26"	"0.0001686"	"0.001602"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"7/72"	"7"	"72"	"300517.74206543"	"HCD"	"MS2"	"40.62197"	"7.0"	"100.000"	"98.8822"	"35111"	"35111"	"35090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.9"	""	"12.1"	""	"5.9"	""	"10.7"	""	"18.8"	"13.3"	""	"722"	"14"	"35.000"	"28.000"	"1.60142720459247"	"13"	"0.0005161"	"0.006594"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"8/72"	"8"	"72"	"390959.018127441"	"HCD"	"MS2"	"20.68344"	"6.7"	"100.000"	"115.0498"	"41539"	"41539"	"41534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.0"	""	"4.9"	""	"7.9"	""	"13.2"	""	"16.4"	"12.9"	""	"722"	"25"	"35.000"	"28.000"	"0.12488411539523"	"17"	"0.0001991"	"0.00453"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"7/72"	"7"	"72"	"406605.225219727"	"HCD"	"MS2"	"37.96787"	"10.5"	"100.000"	"79.2691"	"27197"	"27197"	"27173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"13.7"	""	"17.0"	""	"14.2"	""	"24.0"	"20.2"	""	"722"	"20"	"35.000"	"28.000"	"0.371969389479423"	"14"	"0.0001686"	"0.0018"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"9/72"	"9"	"72"	"457117.995178223"	"HCD"	"MS2"	"22.65772"	"7.5"	"100.000"	"116.9610"	"42064"	"42064"	"42062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"4.4"	""	"8.8"	""	"18.7"	""	"14.5"	"15.6"	""	"722"	"22"	"35.000"	"28.000"	"0.209173759410104"	"14"	"0.0001991"	"0.004802"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"5/72"	"5"	"72"	"281755.257446289"	"HCD"	"MS2"	"27.32689"	"8.1"	"100.000"	"92.2155"	"32452"	"32452"	"32425"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.4"	""	"10.0"	""	"9.8"	""	"13.9"	""	"14.9"	"19.6"	""	"722"	"7"	"35.000"	"28.000"	"7.64728369824708"	"13"	"0.002189"	"0.02062"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"9/72"	"9"	"72"	"371208.961608887"	"HCD"	"MS2"	"15.53607"	"5.4"	"100.000"	"119.9912"	"42591"	"42591"	"42589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.4"	""	"4.1"	""	"7.4"	""	"12.2"	""	"13.5"	"8.8"	""	"722"	"16"	"35.000"	"28.000"	"0.880049705431119"	"14"	"0.0001686"	"0.001382"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"9/72"	"9"	"72"	"419863.505004883"	"HCD"	"MS2"	"9.932381"	"7.0"	"100.000"	"118.9146"	"42432"	"42432"	"42429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.8"	""	"7.9"	""	"8.8"	""	"10.8"	""	"14.4"	"19.0"	""	"722"	"20"	"35.000"	"28.000"	"0.395828628807689"	"14"	"0.0001991"	"0.005622"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58011"	"1355.72577"	"1355.72691"	"-0.84"	"-0.00038"	"8/72"	"8"	"72"	"499110.59375"	"HCD"	"MS2"	"18.32361"	"8.0"	"100.000"	"119.6782"	"42560"	"42560"	"42556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.7"	""	"8.7"	""	"8.6"	""	"15.6"	""	"17.0"	"17.8"	""	"722"	"12"	"35.000"	"28.000"	"2.06303787838544"	"13"	"0.002525"	"0.02516"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"7/72"	"7"	"72"	"265351.945861816"	"HCD"	"MS2"	"36.93964"	"5.9"	"100.000"	"109.3563"	"39256"	"39256"	"39247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.0"	""	"6.8"	""	"7.9"	""	"12.0"	""	"11.1"	"12.1"	""	"727"	"14"	"35.000"	"28.000"	"1.50488881796972"	"13"	"0.001453"	"0.01171"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"5/72"	"5"	"72"	"294594.837219238"	"HCD"	"MS2"	"57.82634"	"7.9"	"100.000"	"95.0416"	"33590"	"33590"	"33562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"11.3"	""	"9.8"	""	"13.5"	""	"13.7"	"16.7"	""	"727"	"8"	"35.000"	"28.000"	"5.94982805539008"	"13"	"0.001049"	"0.008633"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"9/72"	"9"	"72"	"410027.813781738"	"HCD"	"MS2"	"9.034211"	"6.2"	"100.000"	"118.6614"	"42381"	"42381"	"42378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.1"	""	"5.5"	""	"7.7"	""	"11.4"	""	"16.5"	"13.4"	""	"727"	"19"	"35.000"	"28.000"	"0.459731662305763"	"14"	"0.0007633"	"0.007305"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"9/72"	"9"	"72"	"393316.847290039"	"HCD"	"MS2"	"12.44778"	"7.1"	"100.000"	"116.5242"	"41962"	"41962"	"41959"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.7"	""	"6.6"	""	"9.3"	""	"12.8"	""	"16.0"	"15.9"	""	"727"	"25"	"35.000"	"28.000"	"0.102684387088186"	"17"	"0.0001991"	"0.003315"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"9/72"	"9"	"72"	"384096.394836426"	"HCD"	"MS2"	"12.53008"	"6.4"	"100.000"	"118.4641"	"42342"	"42342"	"42338"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.5"	""	"6.9"	""	"7.9"	""	"11.1"	""	"13.3"	"16.5"	""	"727"	"20"	"35.000"	"28.000"	"0.344750111409876"	"14"	"0.0001991"	"0.005673"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"7/72"	"7"	"72"	"366567.112854004"	"HCD"	"MS2"	"14.16637"	"7.0"	"100.000"	"115.1393"	"41581"	"41581"	"41577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.9"	""	"4.0"	""	"9.6"	""	"14.5"	""	"15.5"	"13.4"	""	"727"	"14"	"35.000"	"28.000"	"1.52582390680731"	"15"	"0.001999"	"0.01754"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"8/72"	"8"	"72"	"392291.921508789"	"HCD"	"MS2"	"40.43319"	"7.4"	"100.000"	"115.7253"	"41758"	"41758"	"41754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"7.1"	""	"7.9"	""	"18.6"	""	"17.5"	"13.1"	""	"727"	"18"	"35.000"	"28.000"	"0.600488113656247"	"14"	"0.0001991"	"0.005924"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"6/72"	"6"	"72"	"464995.790100098"	"HCD"	"MS2"	"28.69739"	"12.0"	"100.000"	"78.9465"	"27066"	"27066"	"27040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"15.4"	""	"22.1"	""	"16.8"	""	"24.2"	"26.7"	""	"727"	"15"	"35.000"	"28.000"	"1.24309527353733"	"14"	"0.001999"	"0.01741"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"6/72"	"6"	"72"	"506089.16027832"	"HCD"	"MS2"	"16.07191"	"6.8"	"100.000"	"119.1658"	"42474"	"42474"	"42471"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.2"	"2.0"	"6.3"	""	"9.3"	""	"14.2"	""	"13.8"	"14.0"	""	"727"	"15"	"35.000"	"28.000"	"1.27792220132036"	"13"	"0.006577"	"0.08169"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58014"	"1355.72586"	"1355.72691"	"-0.77"	"-0.00035"	"4/72"	"4"	"72"	"565896.2890625"	"HCD"	"MS2"	"14.30539"	"17.8"	"100.000"	"75.4007"	"25630"	"25630"	"25601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"20.9"	""	"15.0"	""	"20.1"	""	"30.4"	"59.3"	""	"727"	"8"	"35.000"	"28.000"	"5.76108675459615"	"13"	"0.002508"	"0.02357"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36658"	"1355.72588"	"1355.72691"	"-0.77"	"-0.00052"	"6/72"	"6"	"72"	"28121558.3181152"	"HCD"	"MS2"	"0"	"186.2"	"30.439"	"56.1686"	"17859"	"17859"	"17847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.2"	""	"159.0"	""	"184.3"	""	"374.1"	""	"442.4"	"427.4"	""	"727"	"35"	"35.000"	"28.000"	"0.0107276455389323"	"26"	"0.0001686"	"0.001308"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36658"	"1355.72588"	"1355.72691"	"-0.77"	"-0.00052"	"6/72"	"6"	"72"	"29594817.0163574"	"HCD"	"MS2"	"0"	"231.2"	"44.301"	"55.8524"	"17732"	"17732"	"17725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.3"	""	"197.3"	""	"238.1"	""	"466.4"	"0.1"	"542.1"	"525.9"	""	"727"	"35"	"35.000"	"28.000"	"0.0110790982872977"	"26"	"0.0001686"	"0.001147"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"10/72"	"10"	"72"	"403338.069885254"	"HCD"	"MS2"	"19.85128"	"7.0"	"100.000"	"117.0424"	"42081"	"42081"	"42078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.3"	""	"8.9"	""	"10.3"	""	"12.0"	""	"13.9"	"15.5"	""	"727"	"24"	"35.000"	"28.000"	"0.160141692884632"	"16"	"9.9E-05"	"0.0008997"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"4/72"	"4"	"72"	"238646.20098877"	"HCD"	"MS2"	"43.24114"	"5.7"	"100.000"	"108.3397"	"38880"	"38880"	"38866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.3"	""	"5.5"	""	"7.6"	""	"8.8"	""	"16.2"	"11.4"	""	"727"	"10"	"35.000"	"28.000"	"3.58512593026945"	"15"	"0.001348"	"0.01056"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"9/72"	"9"	"72"	"375538.243896484"	"HCD"	"MS2"	"11.80781"	"6.1"	"100.000"	"118.9770"	"42435"	"42435"	"42431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.3"	""	"7.4"	""	"8.6"	""	"9.6"	""	"10.6"	"15.5"	""	"727"	"17"	"35.000"	"28.000"	"0.675311919425832"	"14"	"0.002328"	"0.02218"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"10/72"	"10"	"72"	"874329.179199219"	"HCD"	"MS2"	"17.74158"	"15.0"	"100.000"	"67.3516"	"22395"	"22395"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"15.8"	""	"17.5"	""	"26.4"	""	"33.7"	"33.4"	""	"727"	"27"	"35.000"	"28.000"	"0.077179936193708"	"14"	"9.9E-05"	"0.0008016"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"452.58017"	"1355.72596"	"1355.72691"	"-0.71"	"-0.00032"	"7/72"	"7"	"72"	"5677105.00018311"	"HCD"	"MS2"	"42.74415"	"109.1"	"100.000"	"52.7101"	"16419"	"16419"	"16401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.2"	"6.6"	"129.7"	""	"144.3"	""	"193.2"	""	"212.0"	"229.0"	""	"727"	"21"	"35.000"	"28.000"	"0.286091144554168"	"19"	"0.0001991"	"0.002045"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36664"	"1355.72600"	"1355.72691"	"-0.68"	"-0.00046"	"6/72"	"6"	"72"	"14593788.3165894"	"HCD"	"MS2"	"7.782095"	"449.3"	"100.000"	"55.6638"	"17625"	"17625"	"17608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"480.5"	""	"404.6"	""	"460.6"	""	"884.1"	"3.2"	"1050.4"	"992.9"	""	"727"	"35"	"35.000"	"28.000"	"0.0109775245036613"	"26"	"9.9E-05"	"0.0008063"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"9/72"	"9"	"72"	"399639.282531738"	"HCD"	"MS2"	"26.11633"	"11.0"	"100.000"	"79.3772"	"27268"	"27268"	"27244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"8.7"	""	"17.1"	""	"18.3"	""	"21.5"	"23.2"	""	"727"	"24"	"35.000"	"28.000"	"0.160141692884632"	"17"	"0.001348"	"0.01056"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"7/72"	"7"	"72"	"368811.72833252"	"HCD"	"MS2"	"19.99128"	"8.1"	"100.000"	"114.3363"	"41262"	"41262"	"41236"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.2"	""	"8.2"	""	"10.2"	""	"19.7"	""	"15.6"	"15.4"	""	"727"	"25"	"35.000"	"28.000"	"0.12175993713387"	"16"	"0.0001991"	"0.004183"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"8/72"	"8"	"72"	"276045.005065918"	"HCD"	"MS2"	"23.83756"	"9.8"	"100.000"	"93.7574"	"33035"	"33035"	"33009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"13.4"	""	"13.3"	""	"17.9"	""	"19.2"	"14.9"	""	"727"	"11"	"35.000"	"28.000"	"3.03741697127059"	"16"	"0.00212"	"0.01918"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"7/72"	"7"	"72"	"419901.970825195"	"HCD"	"MS2"	"12.81132"	"6.3"	"100.000"	"115.9322"	"41809"	"41809"	"41806"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.1"	""	"8.9"	""	"6.4"	""	"10.9"	""	"14.2"	"13.7"	""	"727"	"20"	"35.000"	"28.000"	"0.347139805018792"	"15"	"0.0001686"	"0.00141"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"8/72"	"8"	"72"	"344121.759399414"	"HCD"	"MS2"	"23.53731"	"7.9"	"100.000"	"85.6419"	"29775"	"29775"	"29746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"11.4"	""	"10.1"	""	"12.8"	""	"17.2"	"14.9"	""	"727"	"13"	"35.000"	"28.000"	"1.70021723857896"	"16"	"0.002711"	"0.029"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"5/72"	"5"	"72"	"1004682.25744629"	"HCD"	"MS2"	"43.40805"	"32.6"	"100.000"	"69.0922"	"23069"	"23069"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.9"	""	"49.8"	""	"46.3"	""	"47.2"	""	"53.0"	"58.9"	""	"727"	"13"	"35.000"	"28.000"	"1.65388159864543"	"16"	"0.002084"	"0.01879"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"7/72"	"7"	"72"	"1336355.48529053"	"HCD"	"MS2"	"19.27222"	"20.3"	"100.000"	"63.0919"	"20636"	"20636"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.8"	"2.4"	"22.5"	""	"26.7"	""	"34.7"	""	"39.5"	"45.3"	""	"727"	"33"	"35.000"	"28.000"	"0.0178445012981471"	"21"	"0.0001686"	"0.001092"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58020"	"1355.72605"	"1355.72691"	"-0.64"	"-0.00029"	"7/72"	"7"	"72"	"3249856.23901367"	"HCD"	"MS2"	"13.49937"	"38.6"	"100.000"	"59.9051"	"19343"	"19343"	"19321"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.3"	"3.6"	"34.6"	""	"41.8"	""	"72.1"	""	"86.8"	"94.1"	""	"727"	"37"	"35.000"	"28.000"	"0.00670663104871738"	"15"	"9.9E-05"	"0.0009806"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"7/72"	"7"	"72"	"254296.043762207"	"HCD"	"MS2"	"9.517583"	"7.0"	"100.000"	"91.0065"	"31963"	"31963"	"31940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"5.4"	""	"11.8"	""	"12.5"	""	"12.3"	"13.4"	""	"727"	"19"	"35.000"	"28.000"	"0.473701123967411"	"14"	"0.0001991"	"0.005268"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"7/72"	"7"	"72"	"261994.348327637"	"HCD"	"MS2"	"13.65631"	"8.1"	"100.000"	"92.1695"	"32433"	"32433"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"7.1"	""	"12.3"	""	"15.1"	""	"15.7"	"18.1"	""	"727"	"11"	"35.000"	"28.000"	"2.78935901383021"	"14"	"0.002508"	"0.02355"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"6/72"	"6"	"72"	"396917.73248291"	"HCD"	"MS2"	"6.305901"	"9.7"	"100.000"	"79.6036"	"27333"	"27333"	"27307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"10.8"	""	"11.2"	""	"19.6"	""	"20.7"	"19.5"	""	"727"	"16"	"35.000"	"28.000"	"0.949520652324112"	"15"	"0.002189"	"0.02129"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"8/72"	"8"	"72"	"368068.514221191"	"HCD"	"MS2"	"20.20155"	"6.4"	"100.000"	"117.9496"	"42265"	"42265"	"42262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"11.3"	""	"8.0"	""	"13.8"	""	"10.4"	"12.7"	""	"727"	"11"	"35.000"	"28.000"	"2.64547958949135"	"13"	"0.001488"	"0.01285"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"8/72"	"8"	"72"	"481121.934020996"	"HCD"	"MS2"	"8.328918"	"7.4"	"100.000"	"119.4189"	"42519"	"42519"	"42516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.9"	""	"7.6"	""	"8.9"	""	"16.0"	""	"16.7"	"16.1"	""	"727"	"15"	"35.000"	"28.000"	"1.17355761324254"	"13"	"0.001615"	"0.01354"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"10/72"	"10"	"72"	"542163.659545898"	"HCD"	"MS2"	"23.71473"	"12.6"	"100.000"	"73.4336"	"24861"	"24861"	"24835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	"2.2"	"14.6"	""	"17.0"	""	"22.7"	""	"23.4"	"27.1"	""	"727"	"26"	"35.000"	"28.000"	"0.0848212005639144"	"18"	"9.9E-05"	"0.0005723"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"5/72"	"5"	"72"	"5297816.38989258"	"HCD"	"MS2"	"46.92832"	"110.5"	"100.000"	"52.4040"	"16328"	"16328"	"16310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.9"	"4.1"	"140.3"	""	"149.9"	""	"208.7"	""	"208.3"	"228.2"	""	"727"	"22"	"35.000"	"28.000"	"0.218024056218878"	"20"	"0.0001991"	"0.00279"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"452.58023"	"1355.72614"	"1355.72691"	"-0.57"	"-0.00026"	"7/72"	"7"	"72"	"7171709.12756348"	"HCD"	"MS2"	"9.457307"	"97.5"	"100.000"	"60.8859"	"19774"	"19774"	"19760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.8"	"11.1"	"36.0"	""	"71.0"	""	"85.7"	""	"525.6"	"185.7"	""	"727"	"33"	"35.000"	"28.000"	"0.017278435463021"	"22"	"0.0001686"	"0.001034"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58026"	"1355.72623"	"1355.72691"	"-0.50"	"-0.00023"	"8/72"	"8"	"72"	"243912.501037598"	"HCD"	"MS2"	"22.53527"	"6.6"	"100.000"	"107.6868"	"38635"	"38635"	"38628"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.0"	""	"6.2"	""	"6.6"	""	"14.6"	""	"17.0"	"10.7"	""	"727"	"13"	"35.000"	"28.000"	"1.98382982506677"	"13"	"0.004234"	"0.04819"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"452.58026"	"1355.72623"	"1355.72691"	"-0.50"	"-0.00023"	"5/72"	"5"	"72"	"269234.336486816"	"HCD"	"MS2"	"38.86307"	"9.7"	"100.000"	"102.0538"	"36398"	"36398"	"36369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"13.7"	""	"8.8"	""	"18.1"	""	"20.4"	"20.6"	""	"727"	"8"	"35.000"	"28.000"	"6.46404565549148"	"15"	"0.002525"	"0.02392"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.58026"	"1355.72623"	"1355.72691"	"-0.50"	"-0.00023"	"8/72"	"8"	"72"	"451497.338439941"	"HCD"	"MS2"	"16.1733"	"9.9"	"100.000"	"74.9615"	"25482"	"25482"	"25459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"12.2"	""	"14.6"	""	"16.5"	""	"19.5"	"18.8"	""	"727"	"25"	"35.000"	"28.000"	"0.106537969464849"	"19"	"0.0001991"	"0.005767"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"452.58026"	"1355.72623"	"1355.72691"	"-0.50"	"-0.00023"	"8/72"	"8"	"72"	"923675.708190918"	"HCD"	"MS2"	"30.94766"	"22.4"	"100.000"	"68.6373"	"22918"	"22918"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.0"	""	"28.6"	""	"36.2"	""	"33.4"	""	"43.6"	"42.9"	""	"727"	"15"	"35.000"	"28.000"	"1.02684387088186"	"18"	"0.0001991"	"0.004284"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.58026"	"1355.72623"	"1355.72691"	"-0.50"	"-0.00023"	"10/72"	"10"	"72"	"1285784.49291992"	"HCD"	"MS2"	"12.11663"	"20.3"	"100.000"	"63.0239"	"20640"	"20640"	"20620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.5"	""	"22.9"	""	"21.5"	""	"42.2"	""	"44.8"	"41.8"	""	"727"	"30"	"35.000"	"28.000"	"0.0384153164599165"	"20"	"0.0001686"	"0.001395"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"5/72"	"5"	"72"	"298874.077880859"	"HCD"	"MS2"	"52.36966"	"10.0"	"100.000"	"105.8644"	"37924"	"37924"	"37894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"11.8"	""	"12.9"	""	"16.4"	""	"21.5"	"20.6"	""	"730"	"6"	"35.000"	"28.000"	"8.19016902180709"	"13"	"0.0007633"	"0.007448"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"6/72"	"6"	"72"	"241073.981140137"	"HCD"	"MS2"	"31.20252"	"7.2"	"100.000"	"92.1474"	"32389"	"32389"	"32364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.8"	""	"9.7"	""	"8.1"	""	"14.2"	""	"13.3"	"14.9"	""	"730"	"12"	"35.000"	"28.000"	"2.3029943073527"	"15"	"0.002559"	"0.02595"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"8/72"	"8"	"72"	"388569.790588379"	"HCD"	"MS2"	"26.55654"	"9.3"	"100.000"	"79.6907"	"27396"	"27396"	"27366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"12.3"	""	"11.0"	""	"18.0"	""	"14.8"	"21.5"	""	"730"	"26"	"35.000"	"28.000"	"0.0984674892842395"	"18"	"0.0001991"	"0.004365"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"9/72"	"9"	"72"	"694076.199707031"	"HCD"	"MS2"	"60.18592"	"20.5"	"100.000"	"72.0081"	"24255"	"24255"	"24238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	"2.6"	"24.1"	""	"26.1"	""	"34.0"	""	"42.1"	"41.5"	""	"730"	"21"	"35.000"	"28.000"	"0.303593776452475"	"19"	"0.0009352"	"0.008212"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"9/72"	"9"	"72"	"533266.192626953"	"HCD"	"MS2"	"11.02827"	"7.3"	"100.000"	"117.6337"	"42209"	"42209"	"42205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"6.0"	""	"8.4"	""	"10.4"	""	"16.4"	"17.2"	""	"730"	"25"	"35.000"	"28.000"	"0.124535412742004"	"16"	"0.0001686"	"0.001189"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"452.58029"	"1355.72632"	"1355.72691"	"-0.44"	"-0.00020"	"7/72"	"7"	"72"	"5862339.84649658"	"HCD"	"MS2"	"10.90715"	"52.0"	"100.000"	"58.3994"	"18765"	"18765"	"18747"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.2"	"8.3"	"39.2"	""	"58.5"	""	"101.8"	"1.0"	"118.4"	"118.3"	""	"730"	"44"	"35.000"	"28.000"	"0.00131308507331846"	"26"	"9.9E-05"	"0.0006688"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"7/72"	"7"	"72"	"289441.753723145"	"HCD"	"MS2"	"28.69386"	"7.6"	"100.000"	"88.8315"	"31051"	"31051"	"31025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"5.9"	""	"15.1"	""	"10.0"	""	"15.4"	"14.0"	""	"730"	"14"	"35.000"	"28.000"	"1.36865145819601"	"16"	"0.001615"	"0.01382"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"8/72"	"8"	"72"	"492142.688903809"	"HCD"	"MS2"	"27.12608"	"10.8"	"100.000"	"74.6226"	"25345"	"25345"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"12.1"	""	"12.6"	""	"20.1"	""	"21.6"	"23.4"	""	"730"	"17"	"35.000"	"28.000"	"0.670336495322146"	"14"	"0.00192"	"0.01603"	"0.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"7/72"	"7"	"72"	"2014398.97314453"	"HCD"	"MS2"	"4.729768"	"25.5"	"100.000"	"60.2807"	"19529"	"19529"	"19509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	"2.4"	"27.2"	""	"28.5"	""	"45.8"	""	"56.6"	"56.7"	""	"730"	"37"	"35.000"	"28.000"	"0.00759089290792849"	"22"	"9.9E-05"	"0.0008814"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"10/72"	"10"	"72"	"1618626.24975586"	"HCD"	"MS2"	"23.0191"	"22.0"	"100.000"	"62.2099"	"20276"	"20276"	"20256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"24.3"	""	"24.1"	""	"38.9"	"0.7"	"48.1"	"52.3"	""	"730"	"25"	"35.000"	"28.000"	"0.121141477006703"	"14"	"0.0001991"	"0.003457"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"7/72"	"7"	"72"	"4345176.86090088"	"HCD"	"MS2"	"12.83477"	"71.1"	"100.000"	"60.7413"	"19683"	"19683"	"19663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	"6.6"	"45.5"	""	"71.1"	""	"90.2"	""	"273.8"	"144.8"	""	"730"	"32"	"35.000"	"28.000"	"0.0231895790125886"	"22"	"9.9E-05"	"0.0009759"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"452.58032"	"1355.72641"	"1355.72691"	"-0.37"	"-0.00017"	"7/72"	"7"	"72"	"11325317.2022705"	"HCD"	"MS2"	"3.078529"	"89.1"	"100.000"	"57.7647"	"18471"	"18471"	"18455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.3"	"13.3"	"92.8"	""	"93.7"	""	"164.3"	"0.2"	"200.1"	"186.1"	""	"730"	"37"	"35.000"	"28.000"	"0.0077498422863008"	"23"	"0.0001686"	"0.001391"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58035"	"1355.72651"	"1355.72691"	"-0.30"	"-0.00014"	"4/72"	"4"	"72"	"268149.265258789"	"HCD"	"MS2"	"41.78921"	"5.7"	"100.000"	"107.3873"	"38521"	"38521"	"38512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.1"	""	"5.0"	""	"9.6"	""	"9.3"	""	"10.9"	"11.8"	""	"730"	"5"	"35.000"	"28.000"	"11.5689212401087"	"13"	"0.002525"	"0.02438"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"452.58035"	"1355.72651"	"1355.72691"	"-0.30"	"-0.00014"	"9/72"	"9"	"72"	"549211.830932617"	"HCD"	"MS2"	"21.34157"	"16.5"	"100.000"	"72.8999"	"24614"	"24614"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"17.5"	""	"21.1"	""	"30.7"	""	"37.4"	"33.6"	""	"730"	"22"	"35.000"	"28.000"	"0.246202730109741"	"17"	"0.0001991"	"0.005475"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"452.58035"	"1355.72651"	"1355.72691"	"-0.30"	"-0.00014"	"7/72"	"7"	"72"	"3851282.69989014"	"HCD"	"MS2"	"23.88404"	"38.9"	"100.000"	"59.3800"	"19164"	"19164"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.5"	"4.6"	"34.5"	""	"39.9"	""	"68.6"	"2.4"	"91.1"	"98.8"	""	"730"	"39"	"35.000"	"28.000"	"0.00410480815497928"	"23"	"9.9E-05"	"0.0005014"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"6/72"	"6"	"72"	"280605.147583008"	"HCD"	"MS2"	"38.76295"	"9.8"	"100.000"	"91.8407"	"32264"	"32264"	"32240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.8"	""	"14.0"	""	"15.7"	""	"17.1"	""	"17.7"	"20.6"	""	"730"	"10"	"35.000"	"28.000"	"3.49375836022618"	"19"	"0.001348"	"0.0115"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"7/72"	"7"	"72"	"324539.187866211"	"HCD"	"MS2"	"24.9027"	"8.4"	"100.000"	"85.9994"	"29918"	"29918"	"29900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"8.7"	""	"11.4"	""	"20.3"	""	"13.1"	"15.2"	""	"730"	"16"	"35.000"	"28.000"	"0.843903648414092"	"18"	"0.002875"	"0.03118"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"7/72"	"7"	"72"	"468121.604797363"	"HCD"	"MS2"	"31.87458"	"13.2"	"100.000"	"75.2911"	"25616"	"25616"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"14.2"	""	"15.0"	""	"16.9"	""	"26.1"	"37.8"	""	"730"	"13"	"35.000"	"28.000"	"1.76722914168196"	"14"	"0.001049"	"0.008857"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"8/72"	"8"	"72"	"393351.413024902"	"HCD"	"MS2"	"25.34923"	"10.1"	"100.000"	"79.0661"	"27141"	"27141"	"27118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"12.7"	""	"20.4"	""	"12.5"	""	"19.6"	"20.3"	""	"730"	"21"	"35.000"	"28.000"	"0.276244006682655"	"17"	"0.0003938"	"0.006282"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"8/72"	"8"	"72"	"557595.338195801"	"HCD"	"MS2"	"43.94212"	"13.7"	"100.000"	"77.8954"	"26638"	"26638"	"26613"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"18.4"	""	"16.5"	""	"24.3"	""	"22.4"	"30.0"	""	"730"	"18"	"35.000"	"28.000"	"0.61559185426689"	"14"	"0.0001686"	"0.001558"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"10/72"	"10"	"72"	"889416.241394043"	"HCD"	"MS2"	"17.94291"	"14.2"	"100.000"	"67.3990"	"22383"	"22383"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.9"	""	"17.1"	""	"26.1"	""	"21.1"	""	"29.4"	"28.5"	""	"730"	"32"	"35.000"	"28.000"	"0.0205727744376473"	"19"	"0.0001686"	"0.001197"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"9/72"	"9"	"72"	"1367622.41217041"	"HCD"	"MS2"	"34.94532"	"19.2"	"100.000"	"65.9298"	"21822"	"21822"	"21798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"15.3"	""	"21.7"	""	"33.8"	"0.6"	"44.7"	"45.6"	""	"730"	"27"	"35.000"	"28.000"	"0.0773201814365703"	"15"	"0.0001686"	"0.001167"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"452.58038"	"1355.72660"	"1355.72691"	"-0.23"	"-0.00011"	"7/72"	"7"	"72"	"137734818.977051"	"HCD"	"MS2"	"3.061117"	"244.8"	"24.860"	"55.2520"	"17491"	"17491"	"17474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.6"	"42.1"	"206.6"	""	"231.0"	""	"503.2"	""	"542.1"	"552.2"	""	"730"	"39"	"35.000"	"28.000"	"0.00439838118235706"	"22"	"0.0001991"	"0.002252"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58041"	"1355.72669"	"1355.72691"	"-0.17"	"-0.00008"	"5/72"	"5"	"72"	"363803.875610352"	"HCD"	"MS2"	"56.73411"	"15.4"	"100.000"	"91.5060"	"32128"	"32128"	"32105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"19.0"	""	"20.4"	""	"25.5"	""	"28.7"	"34.8"	""	"732"	"9"	"35.000"	"28.000"	"4.53399550670115"	"13"	"0.004593"	"0.05418"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58041"	"1355.72669"	"1355.72691"	"-0.17"	"-0.00008"	"9/72"	"9"	"72"	"575636.894226074"	"HCD"	"MS2"	"37.01891"	"15.6"	"100.000"	"73.0142"	"24690"	"24690"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.1"	""	"16.7"	""	"21.8"	""	"21.8"	""	"32.8"	"36.9"	""	"732"	"19"	"35.000"	"28.000"	"0.436999646233924"	"14"	"0.000264"	"0.006155"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"452.58044"	"1355.72678"	"1355.72691"	"-0.10"	"-0.00005"	"6/72"	"6"	"72"	"252636.633911133"	"HCD"	"MS2"	"36.19223"	"7.7"	"100.000"	"109.6390"	"39364"	"39364"	"39355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"11.8"	""	"11.6"	""	"9.6"	""	"14.0"	"14.6"	""	"731"	"16"	"35.000"	"28.000"	"0.965800400801171"	"16"	"0.003568"	"0.0398"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"452.58044"	"1355.72678"	"1355.72691"	"-0.10"	"-0.00005"	"5/72"	"5"	"72"	"264041.469177246"	"HCD"	"MS2"	"38.72116"	"8.8"	"100.000"	"102.4394"	"36553"	"36553"	"36531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"6.0"	""	"12.5"	""	"14.7"	""	"18.3"	"20.7"	""	"731"	"20"	"35.000"	"28.000"	"0.37229515233378"	"19"	"0.001951"	"0.01722"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58044"	"1355.72678"	"1355.72691"	"-0.10"	"-0.00005"	"5/72"	"5"	"72"	"458942.259399414"	"HCD"	"MS2"	"38.99863"	"12.1"	"100.000"	"78.0313"	"26720"	"26720"	"26699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"16.9"	""	"15.1"	""	"17.8"	""	"23.3"	"26.9"	""	"731"	"16"	"35.000"	"28.000"	"0.84505968080918"	"14"	"0.0001991"	"0.004888"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"452.58044"	"1355.72678"	"1355.72691"	"-0.10"	"-0.00005"	"10/72"	"10"	"72"	"1465166.4553833"	"HCD"	"MS2"	"35.43238"	"27.3"	"100.000"	"62.7720"	"20505"	"20505"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"25.1"	""	"30.8"	""	"40.9"	""	"72.2"	"68.8"	""	"731"	"24"	"35.000"	"28.000"	"0.132095304794779"	"16"	"0.0001686"	"0.001802"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"452.58047"	"1355.72687"	"1355.72691"	"-0.03"	"-0.00001"	"6/72"	"6"	"72"	"212165.421875"	"HCD"	"MS2"	"15.39235"	"2.8"	"100.000"	"118.2092"	"42302"	"42302"	"42298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.9"	""	"4.6"	"1.7"	""	""	"4.7"	""	"6.4"	"6.4"	""	"737"	"12"	"35.000"	"28.000"	"2.1950149989044"	"17"	"0.001261"	"0.009861"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58047"	"1355.72687"	"1355.72691"	"-0.03"	"-0.00001"	"6/72"	"6"	"72"	"326066.70715332"	"HCD"	"MS2"	"41.43879"	"7.6"	"100.000"	"85.6322"	"29799"	"29799"	"29780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"6.2"	""	"8.2"	""	"14.0"	""	"15.7"	"17.7"	""	"737"	"14"	"35.000"	"28.000"	"1.42048774799837"	"13"	"0.001348"	"0.01148"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"452.58047"	"1355.72687"	"1355.72691"	"-0.03"	"-0.00001"	"5/72"	"5"	"72"	"362112.593933105"	"HCD"	"MS2"	"56.34348"	"11.2"	"100.000"	"104.1633"	"37247"	"37247"	"37220"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"11.0"	""	"13.6"	""	"18.8"	""	"23.2"	"28.2"	""	"737"	"4"	"35.000"	"28.000"	"14.1722071683713"	"13"	"0.002419"	"0.0228"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"452.58047"	"1355.72687"	"1355.72691"	"-0.03"	"-0.00001"	"8/72"	"8"	"72"	"605411.184326172"	"HCD"	"MS2"	"17.28786"	"13.1"	"100.000"	"73.2988"	"24777"	"24777"	"24746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"15.6"	""	"15.1"	""	"29.9"	""	"22.8"	"28.1"	""	"737"	"23"	"35.000"	"28.000"	"0.168825285254306"	"18"	"0.0001991"	"0.005312"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58051"	"1355.72696"	"1355.72691"	"0.04"	"0.00002"	"8/72"	"8"	"72"	"275302.169555664"	"HCD"	"MS2"	"29.25427"	"7.8"	"100.000"	"104.4503"	"37360"	"37360"	"37342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"8.6"	""	"7.3"	""	"14.7"	""	"14.9"	"19.1"	""	"734"	"15"	"35.000"	"28.000"	"1.25506455402531"	"13"	"0.0005778"	"0.007071"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.58051"	"1355.72696"	"1355.72691"	"0.04"	"0.00002"	"5/72"	"5"	"72"	"288190.645385742"	"HCD"	"MS2"	"58.18142"	"9.8"	"100.000"	"104.9848"	"37590"	"37590"	"37574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.4"	""	"10.0"	""	"10.1"	""	"21.2"	""	"26.0"	"16.1"	""	"734"	"5"	"35.000"	"28.000"	"11.5788669677849"	"13"	"0.00167"	"0.01493"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"452.58051"	"1355.72696"	"1355.72691"	"0.04"	"0.00002"	"8/72"	"8"	"72"	"316768.564697266"	"HCD"	"MS2"	"31.4691"	"8.9"	"100.000"	"86.0772"	"29980"	"29980"	"29951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.4"	""	"12.1"	""	"10.8"	""	"15.9"	""	"17.7"	"20.1"	""	"734"	"12"	"35.000"	"28.000"	"2.59816102868979"	"15"	"0.004213"	"0.04705"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"452.58051"	"1355.72696"	"1355.72691"	"0.04"	"0.00002"	"5/72"	"5"	"72"	"340303.495361328"	"HCD"	"MS2"	"35.81987"	"11.1"	"100.000"	"104.7378"	"37473"	"37473"	"37455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"9.9"	""	"11.2"	""	"20.4"	""	"29.1"	"19.7"	""	"734"	"7"	"35.000"	"28.000"	"8.21610657854581"	"14"	"0.001488"	"0.01246"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"678.36713"	"1355.72698"	"1355.72691"	"0.05"	"0.00003"	"7/72"	"7"	"72"	"519426.677429199"	"HCD"	"MS2"	"23.40144"	"34.0"	"100.000"	"57.5734"	"18428"	"18428"	"18403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.3"	""	"40.4"	""	"37.2"	""	"58.8"	""	"78.5"	"75.3"	""	"734"	"9"	"35.000"	"28.000"	"4.19436348867846"	"19"	"0.003317"	"0.03713"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"452.58054"	"1355.72705"	"1355.72691"	"0.10"	"0.00005"	"6/72"	"6"	"72"	"262451.235656738"	"HCD"	"MS2"	"44.80879"	"6.2"	"100.000"	"99.0307"	"35201"	"35201"	"35170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"8.0"	""	"7.4"	""	"12.6"	""	"11.9"	"12.5"	""	"734"	"12"	"35.000"	"28.000"	"2.17103119742399"	"17"	"0.001951"	"0.01673"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"452.58054"	"1355.72705"	"1355.72691"	"0.10"	"0.00005"	"7/72"	"7"	"72"	"301718.288330078"	"HCD"	"MS2"	"30.99212"	"7.9"	"100.000"	"86.3912"	"30074"	"30074"	"30056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"10.1"	""	"7.6"	""	"17.9"	""	"14.5"	"18.6"	""	"734"	"10"	"35.000"	"28.000"	"3.40930663948237"	"15"	"0.00212"	"0.01926"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"452.58054"	"1355.72705"	"1355.72691"	"0.10"	"0.00005"	"5/72"	"5"	"72"	"668332.981750488"	"HCD"	"MS2"	"52.13124"	"25.5"	"100.000"	"75.6346"	"25756"	"25756"	"25729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"22.7"	""	"18.3"	""	"27.3"	""	"26.4"	"115.1"	""	"734"	"7"	"35.000"	"28.000"	"7.93717698207816"	"15"	"0.002035"	"0.01813"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"678.36719"	"1355.72710"	"1355.72691"	"0.14"	"0.00009"	"6/72"	"6"	"72"	"6742329.72906494"	"HCD"	"MS2"	"4.77314"	"252.7"	"100.000"	"57.1326"	"18213"	"18213"	"18196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"249.6"	""	"260.3"	""	"273.7"	""	"485.2"	""	"585.5"	"553.7"	""	"735"	"35"	"35.000"	"28.000"	"0.0116481604266848"	"26"	"9.9E-05"	"0.0005919"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58057"	"1355.72715"	"1355.72691"	"0.17"	"0.00008"	"7/72"	"7"	"72"	"301576.296447754"	"HCD"	"MS2"	"41.50165"	"7.7"	"100.000"	"88.6872"	"31032"	"31032"	"31007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.0"	""	"11.5"	""	"14.3"	""	"11.5"	""	"14.7"	"15.2"	""	"741"	"19"	"35.000"	"28.000"	"0.497494418101579"	"14"	"0.0001991"	"0.005316"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"452.58057"	"1355.72715"	"1355.72691"	"0.17"	"0.00008"	"7/72"	"7"	"72"	"355411.045043945"	"HCD"	"MS2"	"32.61898"	"11.7"	"100.000"	"83.3071"	"28860"	"28860"	"28835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.7"	""	"14.6"	""	"16.1"	""	"14.2"	""	"25.9"	"26.9"	""	"741"	"14"	"35.000"	"28.000"	"1.62475623525632"	"14"	"0.00212"	"0.0192"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58057"	"1355.72715"	"1355.72691"	"0.17"	"0.00008"	"9/72"	"9"	"72"	"1351027.89941406"	"HCD"	"MS2"	"15.19492"	"22.6"	"100.000"	"63.4148"	"20767"	"20767"	"20747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"21.8"	""	"23.4"	""	"39.0"	"2.4"	"56.0"	"49.5"	""	"741"	"26"	"35.000"	"28.000"	"0.0941430387406018"	"14"	"0.0001686"	"0.001386"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58060"	"1355.72724"	"1355.72691"	"0.24"	"0.00011"	"8/72"	"8"	"72"	"511176.901977539"	"HCD"	"MS2"	"31.52671"	"13.8"	"100.000"	"77.6909"	"26582"	"26582"	"26567"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"22.4"	""	"12.6"	""	"17.9"	""	"32.6"	"28.8"	""	"739"	"13"	"35.000"	"28.000"	"1.73625873129627"	"14"	"0.0001991"	"0.00309"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"452.58063"	"1355.72733"	"1355.72691"	"0.31"	"0.00014"	"9/72"	"9"	"72"	"843351.637756348"	"HCD"	"MS2"	"27.81399"	"14.8"	"100.000"	"67.0292"	"22264"	"22264"	"22247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"12.7"	""	"19.6"	""	"26.1"	"1.0"	"30.2"	"36.9"	""	"739"	"30"	"35.000"	"28.000"	"0.0405148693474907"	"16"	"9.9E-05"	"0.0006401"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"452.58066"	"1355.72742"	"1355.72691"	"0.37"	"0.00017"	"7/72"	"7"	"72"	"498627.412902832"	"HCD"	"MS2"	"25.97965"	"11.6"	"100.000"	"78.2987"	"26802"	"26802"	"26774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"13.2"	""	"16.4"	""	"18.2"	""	"23.9"	"24.6"	""	"739"	"17"	"35.000"	"28.000"	"0.777346133493713"	"19"	"0.002035"	"0.01803"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"452.58069"	"1355.72751"	"1355.72691"	"0.44"	"0.00020"	"6/72"	"6"	"72"	"245341.846130371"	"HCD"	"MS2"	"11.0248"	"4.0"	"100.000"	"118.1514"	"42301"	"42301"	"42297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.6"	""	"5.2"	""	"4.9"	""	"6.3"	""	"9.7"	"8.3"	""	"718"	"15"	"35.000"	"28.000"	"1.21086143808534"	"18"	"0.001348"	"0.01112"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58078"	"1355.72779"	"1355.72691"	"0.64"	"0.00029"	"4/72"	"4"	"72"	"274259.253601074"	"HCD"	"MS2"	"50.8547"	"8.9"	"100.000"	"99.4464"	"35368"	"35368"	"35343"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.6"	""	"11.0"	""	"13.7"	""	"16.3"	""	"16.4"	"19.0"	""	"716"	"9"	"35.000"	"28.000"	"4.53819367977109"	"13"	"0.001872"	"0.01566"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58078"	"1355.72779"	"1355.72691"	"0.64"	"0.00029"	"10/72"	"10"	"72"	"756885.442321777"	"HCD"	"MS2"	"57.10673"	"15.0"	"100.000"	"68.3077"	"22783"	"22783"	"22762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"11.6"	""	"25.0"	""	"18.9"	""	"33.8"	"35.6"	""	"716"	"27"	"35.000"	"28.000"	"0.0679020719793591"	"15"	"9.9E-05"	"0.0006206"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"452.58081"	"1355.72788"	"1355.72691"	"0.71"	"0.00032"	"8/72"	"8"	"72"	"419186.881286621"	"HCD"	"MS2"	"23.38741"	"10.7"	"100.000"	"78.3838"	"26863"	"26863"	"26839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.8"	""	"10.4"	""	"13.3"	""	"20.4"	""	"23.1"	"21.2"	""	"716"	"21"	"35.000"	"28.000"	"0.258156477547478"	"18"	"0.0001991"	"0.002352"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"452.58081"	"1355.72788"	"1355.72691"	"0.71"	"0.00032"	"7/72"	"7"	"72"	"147483323.288574"	"HCD"	"MS2"	"2.527571"	"295.2"	"26.920"	"55.6291"	"17610"	"17610"	"17592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.4"	"55.1"	"248.7"	""	"281.3"	""	"609.8"	"0.2"	"645.4"	"671.7"	""	"716"	"37"	"35.000"	"28.000"	"0.00648459753157817"	"21"	"0.0001991"	"0.003309"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"452.58084"	"1355.72797"	"1355.72691"	"0.78"	"0.00035"	"7/72"	"7"	"72"	"55727444.0241699"	"HCD"	"MS2"	"2.268584"	"68.6"	"16.780"	"57.1320"	"18248"	"18248"	"18231"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	"16.2"	"57.8"	""	"73.8"	""	"130.1"	""	"161.1"	"159.9"	""	"716"	"33"	"35.000"	"28.000"	"0.0162885725533717"	"22"	"0.0001991"	"0.002525"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"452.58084"	"1355.72797"	"1355.72691"	"0.78"	"0.00035"	"6/72"	"6"	"72"	"39291408.6740723"	"HCD"	"MS2"	"1.811037"	"74.7"	"26.087"	"57.4612"	"18347"	"18347"	"18330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.7"	"13.9"	"56.1"	""	"78.5"	""	"136.6"	""	"171.8"	"181.3"	""	"716"	"28"	"35.000"	"28.000"	"0.0562189883951412"	"22"	"0.0001991"	"0.005001"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGQPPASMGR"	"[K].lPGQPPASmGR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"678.36768"	"1355.72807"	"1355.73029"	"-1.63"	"-0.00111"	"9/94"	"9"	"94"	"2918689.96063232"	"HCD"	"MS2"	"0"	"66.4"	"100.000"	"39.0790"	"10927"	"10927"	"10906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.8"	""	"72.1"	""	"85.6"	""	"155.7"	"1.0"	"126.6"	"119.8"	""	"716"	"30"	"35.000"	"28.000"	"0.0342675477523554"	"21"	"0.001999"	"0.01748"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"452.58093"	"1355.72824"	"1355.72691"	"0.98"	"0.00044"	"5/72"	"5"	"72"	"265539.257995605"	"HCD"	"MS2"	"27.46381"	"9.3"	"100.000"	"94.7232"	"33462"	"33462"	"33436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"10.1"	""	"9.2"	""	"14.0"	""	"21.6"	"23.1"	""	"716"	"12"	"35.000"	"28.000"	"2.25882729323909"	"13"	"0.008485"	"0.1077"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"452.58118"	"1355.72898"	"1355.72691"	"1.52"	"0.00069"	"7/72"	"7"	"72"	"323706681.879883"	"HCD"	"MS2"	"1.881491"	"94.1"	"3.928"	"56.8311"	"18126"	"18126"	"18109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.2"	"16.8"	"79.0"	""	"100.0"	""	"190.3"	""	"212.6"	"209.0"	""	"722"	"30"	"35.000"	"28.000"	"0.0336904802587714"	"23"	"0.002189"	"0.02015"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPGQPPASMGR"	"[K].lPGQPPASmGR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"678.36829"	"1355.72930"	"1355.73029"	"-0.73"	"-0.00050"	"10/94"	"10"	"94"	"3073327.94720459"	"HCD"	"MS2"	"0"	"68.3"	"100.000"	"39.1548"	"10922"	"10922"	"10903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.0"	""	"75.9"	""	"88.8"	""	"166.0"	""	"141.7"	"117.3"	""	"721"	"36"	"35.000"	"28.000"	"0.0095039746459005"	"21"	"0.0008247"	"0.007575"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"452.58133"	"1355.72943"	"1355.72691"	"1.86"	"0.00084"	"7/72"	"7"	"72"	"1343844497.78906"	"HCD"	"MS2"	"1.708976"	"79.5"	"0.824"	"55.6370"	"17647"	"17647"	"17637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	"18.2"	"73.3"	""	"78.7"	""	"151.3"	""	"185.7"	"182.5"	""	"721"	"33"	"35.000"	"28.000"	"0.0163269577555255"	"15"	"0.002559"	"0.02594"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"452.58142"	"1355.72971"	"1355.72691"	"2.06"	"0.00093"	"7/72"	"7"	"72"	"908676354.085938"	"HCD"	"MS2"	"1.786398"	"84.0"	"1.292"	"56.2076"	"17875"	"17875"	"17858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.6"	"18.5"	"74.2"	""	"79.2"	""	"173.1"	""	"179.0"	"198.1"	""	"718"	"37"	"35.000"	"28.000"	"0.00764001917507794"	"24"	"0.001488"	"0.01203"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"452.58148"	"1355.72989"	"1355.72691"	"2.20"	"0.00099"	"7/72"	"7"	"72"	"1350325528.39063"	"HCD"	"MS2"	"1.688355"	"89.9"	"0.860"	"55.9273"	"17731"	"17731"	"17721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.4"	"15.6"	"68.4"	""	"86.5"	""	"186.7"	"0.0"	"207.7"	"208.4"	""	"717"	"37"	"35.000"	"28.000"	"0.0072692425494838"	"23"	"0.00212"	"0.01892"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"452.58160"	"1355.73026"	"1355.72691"	"2.47"	"0.00111"	"6/72"	"6"	"72"	"708187040.931641"	"HCD"	"MS2"	"1.667699"	"105.9"	"1.998"	"56.8094"	"18082"	"18082"	"18069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.3"	"19.4"	"88.5"	""	"106.9"	""	"206.1"	""	"242.4"	"247.5"	""	"726"	"31"	"35.000"	"28.000"	"0.0287016341963937"	"22"	"0.002508"	"0.0234"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"452.58163"	"1355.73035"	"1355.72691"	"2.53"	"0.00115"	"7/72"	"7"	"72"	"243068388.633789"	"HCD"	"MS2"	"1.780608"	"94.6"	"5.292"	"57.1672"	"18228"	"18228"	"18211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.6"	"21.0"	"77.9"	""	"95.1"	""	"196.6"	"0.4"	"218.5"	"212.4"	""	"726"	"32"	"35.000"	"28.000"	"0.0230094705186265"	"25"	"0.001615"	"0.01392"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"452.58170"	"1355.73053"	"1355.72691"	"2.67"	"0.00121"	"7/72"	"7"	"72"	"687162339.8125"	"HCD"	"MS2"	"1.724317"	"101.7"	"2.022"	"56.5491"	"18012"	"18012"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.2"	"23.1"	"82.1"	""	"100.9"	""	"206.1"	""	"239.7"	"237.9"	""	"728"	"37"	"35.000"	"28.000"	"0.00724605095391336"	"22"	"0.001615"	"0.01481"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"452.58176"	"1355.73072"	"1355.72691"	"2.80"	"0.00127"	"7/72"	"7"	"72"	"1431011217.87109"	"HCD"	"MS2"	"1.641858"	"104.4"	"1.026"	"56.1976"	"17837"	"17837"	"17833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.1"	"18.3"	"88.6"	""	"107.1"	""	"209.2"	""	"236.6"	"240.7"	""	"728"	"35"	"35.000"	"28.000"	"0.0105950103097624"	"24"	"0.002525"	"0.02464"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"452.58194"	"1355.73127"	"1355.72691"	"3.21"	"0.00145"	"7/72"	"7"	"72"	"1262615119.59766"	"HCD"	"MS2"	"1.56675"	"112.3"	"1.191"	"55.9028"	"17752"	"17752"	"17744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.1"	"19.3"	"85.5"	""	"110.6"	""	"223.5"	""	"273.8"	"256.8"	""	"724"	"34"	"35.000"	"28.000"	"0.0153358753709934"	"21"	"0.001615"	"0.01357"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPENFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"452.58200"	"1355.73145"	"1355.72691"	"3.34"	"0.00151"	"7/72"	"7"	"72"	"873098365.828125"	"HCD"	"MS2"	"1.644584"	"100.5"	"1.610"	"56.5367"	"17973"	"17973"	"17963"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.3"	"16.1"	"95.2"	""	"99.9"	""	"201.2"	""	"234.2"	"224.3"	""	"724"	"34"	"35.000"	"28.000"	"0.014083434248793"	"22"	"0.001488"	"0.0121"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"678.39520"	"1355.78313"	"1355.78443"	"-0.96"	"-0.00065"	"9/92"	"9"	"92"	"5063942.8807373"	"HCD"	"MS2"	"31.44351"	"229.9"	"100.000"	"61.4245"	"19993"	"19993"	"19974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"369.3"	""	"288.6"	""	"297.1"	""	"390.6"	""	"426.7"	"408.5"	""	"530"	"28"	"34.000"	"27.000"	"0.0379529793307489"	"24"	"0"	"0.0001527"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"678.39526"	"1355.78325"	"1355.78443"	"-0.87"	"-0.00059"	"10/92"	"10"	"92"	"4864985.76031494"	"HCD"	"MS2"	"30.67196"	"221.3"	"100.000"	"61.4914"	"19990"	"19990"	"19973"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"351.4"	""	"294.8"	""	"289.6"	""	"358.7"	""	"414.3"	"390.2"	""	"530"	"29"	"34.000"	"27.000"	"0.0350950506826586"	"23"	"0"	"0.0001085"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"678.39539"	"1355.78349"	"1355.78443"	"-0.69"	"-0.00047"	"8/92"	"8"	"92"	"5625032.65350342"	"HCD"	"MS2"	"4.394743"	"246.5"	"100.000"	"61.7747"	"20101"	"20101"	"20084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"363.4"	""	"348.2"	""	"306.7"	""	"408.3"	""	"459.3"	"451.8"	""	"530"	"34"	"34.000"	"27.000"	"0.0102859846987522"	"25"	"0"	"6.589E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEIPVNLR"	"[K].tGQEIPVNLR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"678.39563"	"1355.78398"	"1355.78443"	"-0.33"	"-0.00022"	"11/92"	"11"	"92"	"5334913.99920654"	"HCD"	"MS2"	"5.77923"	"232.7"	"100.000"	"61.7381"	"20119"	"20119"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"352.7"	""	"314.4"	""	"288.1"	""	"390.3"	""	"440.9"	"419.4"	""	"535"	"34"	"34.000"	"27.000"	"0.0111512560078315"	"24"	"0"	"9.071E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"452.90704"	"1356.70658"	"1356.71093"	"-3.21"	"-0.00145"	"10/72"	"10"	"72"	"3235313.39215088"	"HCD"	"MS2"	"56.35891"	"34.4"	"100.000"	"65.9516"	"21798"	"21798"	"21769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	"4.4"	"30.6"	""	"35.6"	""	"64.0"	""	"84.6"	"76.7"	""	"619"	"33"	"34.000"	"27.000"	"0.0153341834054083"	"23"	"0.0001686"	"0.001307"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"452.90717"	"1356.70694"	"1356.71093"	"-2.94"	"-0.00133"	"10/72"	"10"	"72"	"2239716.41766357"	"HCD"	"MS2"	"16.65089"	"29.8"	"100.000"	"66.6411"	"22108"	"22108"	"22096"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	"3.9"	"28.5"	""	"33.5"	""	"57.0"	"1.3"	"68.1"	"62.1"	""	"619"	"32"	"34.000"	"27.000"	"0.0204956007895695"	"21"	"9.9E-05"	"0.0009603"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"452.90723"	"1356.70713"	"1356.71093"	"-2.80"	"-0.00127"	"7/72"	"7"	"72"	"11906062.0814209"	"HCD"	"MS2"	"29.85056"	"98.8"	"96.486"	"58.5169"	"18813"	"18813"	"18795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.1"	"17.5"	"71.1"	""	"92.7"	""	"215.2"	""	"231.0"	"226.3"	""	"632"	"38"	"34.000"	"28.000"	"0.0051604441553461"	"22"	"0.0001686"	"0.001074"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"452.90729"	"1356.70731"	"1356.71093"	"-2.67"	"-0.00121"	"6/72"	"6"	"72"	"4314571.45019531"	"HCD"	"MS2"	"4.288614"	"43.8"	"100.000"	"66.5002"	"22019"	"22019"	"22007"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	"5.5"	"40.8"	""	"44.5"	""	"85.4"	""	"107.2"	"92.3"	""	"632"	"42"	"34.000"	"28.000"	"0.00220641439688386"	""	"0.0001686"	"0.001341"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"452.90750"	"1356.70795"	"1356.71093"	"-2.20"	"-0.00099"	"7/72"	"7"	"72"	"4261070.61517334"	"HCD"	"MS2"	"38.01485"	"41.5"	"100.000"	"66.0173"	"21858"	"21858"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.3"	"8.7"	"28.9"	""	"46.5"	""	"79.4"	"0.2"	"99.9"	"95.4"	""	"633"	"38"	"35.000"	"28.000"	"0.00528900179429339"	"22"	"9.9E-05"	"0.0004901"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"452.90781"	"1356.70887"	"1356.71093"	"-1.52"	"-0.00069"	"10/72"	"10"	"72"	"6195059.09857178"	"HCD"	"MS2"	"20.86958"	"54.7"	"100.000"	"59.0924"	"19047"	"19047"	"19029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.8"	"6.9"	"31.0"	""	"48.3"	""	"120.9"	""	"133.5"	"132.2"	""	"631"	"32"	"34.000"	"28.000"	"0.0193641912629493"	"21"	"0.0001686"	"0.001187"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"452.90784"	"1356.70896"	"1356.71093"	"-1.45"	"-0.00066"	"7/72"	"7"	"72"	"17867833.1984253"	"HCD"	"MS2"	"1.980507"	"88.0"	"65.687"	"66.3183"	"21981"	"21981"	"21968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.1"	"18.4"	"57.0"	""	"91.8"	""	"182.4"	""	"226.3"	"187.6"	""	"642"	"43"	"35.000"	"28.000"	"0.00175592124088965"	"25"	"0.0001686"	"0.001896"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"452.90784"	"1356.70896"	"1356.71093"	"-1.45"	"-0.00066"	"10/72"	"10"	"72"	"13243701.1399536"	"HCD"	"MS2"	"23.64175"	"109.2"	"100.000"	"58.7863"	"18887"	"18887"	"18871"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.6"	"18.5"	"91.1"	""	"101.1"	""	"219.2"	""	"255.7"	"259.2"	""	"642"	"33"	"35.000"	"28.000"	"0.0161996276517893"	"27"	"0.0001686"	"0.001742"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"452.90802"	"1356.70951"	"1356.71093"	"-1.05"	"-0.00047"	"7/72"	"7"	"72"	"22577483.0169678"	"HCD"	"MS2"	"3.221291"	"100.5"	"60.148"	"66.2298"	"21911"	"21911"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.1"	"17.2"	"87.2"	""	"93.8"	""	"201.2"	""	"253.4"	"217.2"	""	"639"	"43"	"35.000"	"28.000"	"0.00155049675801798"	"24"	"9.9E-05"	"0.0008176"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"678.85840"	"1356.70952"	"1356.71093"	"-1.04"	"-0.00071"	"6/72"	"6"	"72"	"1490113.4855957"	"HCD"	"MS2"	"2.626481"	"51.2"	"100.000"	"59.0491"	"18994"	"18994"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.3"	""	"46.7"	""	"43.4"	""	"100.5"	"0.5"	"125.5"	"119.0"	""	"639"	"31"	"35.000"	"28.000"	"0.0253787870994408"	"25"	"0.001596"	"0.01303"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"678.85840"	"1356.70952"	"1356.71093"	"-1.04"	"-0.00071"	"10/72"	"10"	"72"	"1732969.03778076"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"66.2654"	"21959"	"21959"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"55.9"	""	"67.7"	""	"121.8"	""	"146.1"	"143.1"	""	"639"	"25"	"35.000"	"28.000"	"0.105553068361262"	"20"	"0.003317"	"0.03648"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"678.85840"	"1356.70952"	"1356.71093"	"-1.04"	"-0.00071"	"10/72"	"10"	"72"	"2017660.82501221"	"HCD"	"MS2"	"0"	"67.0"	"100.000"	"66.2025"	"21900"	"21900"	"21881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"52.2"	""	"73.0"	""	"142.8"	""	"157.1"	"146.0"	""	"639"	"25"	"35.000"	"28.000"	"0.110782423719584"	"23"	"0.004392"	"0.05189"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"678.85883"	"1356.71037"	"1356.71093"	"-0.41"	"-0.00028"	"6/72"	"6"	"72"	"1422133.01812744"	"HCD"	"MS2"	"0"	"46.6"	"100.000"	"58.7448"	"18906"	"18906"	"18887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.2"	""	"33.8"	""	"38.7"	""	"95.9"	""	"112.6"	"108.5"	""	"660"	"33"	"35.000"	"28.000"	"0.018302648527611"	"22"	"0.001999"	"0.01754"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"452.90869"	"1356.71152"	"1356.71093"	"0.43"	"0.00020"	"7/72"	"7"	"72"	"30078513.734375"	"HCD"	"MS2"	"5.087728"	"81.5"	"36.037"	"59.0789"	"19007"	"19007"	"18990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.3"	"11.8"	"51.2"	""	"68.3"	""	"188.4"	"1.2"	"202.5"	"187.7"	""	"666"	"43"	"35.000"	"28.000"	"0.00156474738165537"	"24"	"0.0001686"	"0.001035"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHVDPENFR"	"[K].lHVDPEnFR.[L]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"452.90878"	"1356.71180"	"1356.71093"	"0.64"	"0.00029"	"7/72"	"7"	"72"	"33095864.4237061"	"HCD"	"MS2"	"3.78347"	"92.6"	"36.402"	"58.8026"	"18930"	"18930"	"18917"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.1"	"19.0"	"65.0"	""	"78.7"	""	"197.6"	""	"240.0"	"225.6"	""	"649"	"39"	"35.000"	"28.000"	"0.00431732458633891"	"27"	"0.0001991"	"0.002116"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQELTALR"	"[K].lSPQELTALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"678.90570"	"1356.80412"	"1356.80483"	"-0.52"	"-0.00035"	"7/94"	"7"	"94"	"375353.663146973"	"HCD"	"MS2"	"4.712645"	"24.0"	"100.000"	"96.2183"	"34066"	"34066"	"34047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.4"	""	"27.0"	""	"26.0"	""	"45.4"	""	"51.6"	"50.5"	""	"573"	"40"	"34.000"	"27.000"	"0.00295886142750641"	"25"	"0.0003294"	"0.006205"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPQELTALR"	"[K].lSPQELTALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"678.90576"	"1356.80425"	"1356.80483"	"-0.43"	"-0.00029"	"7/94"	"7"	"94"	"394867.658203125"	"HCD"	"MS2"	"11.92654"	"26.5"	"100.000"	"96.1403"	"34002"	"34002"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.7"	""	"24.0"	""	"38.4"	""	"47.7"	"0.1"	"54.8"	"55.8"	""	"587"	"38"	"34.000"	"27.000"	"0.00439145165063716"	"23"	"9.9E-05"	"0.0004929"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"678.90948"	"1356.81169"	"1356.81389"	"-1.62"	"-0.00110"	"14/68"	"14"	"68"	"1504200.2925415"	"HCD"	"MS2"	"0"	"98.3"	"100.000"	"77.1203"	"26357"	"26357"	"26341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.5"	""	"148.2"	""	"120.0"	""	"134.3"	""	"177.0"	"208.8"	""	"511"	"34"	"34.000"	"27.000"	"0.0111273283726663"	"23"	"0.0001991"	"0.002508"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"452.94211"	"1356.81177"	"1356.81389"	"-1.56"	"-0.00071"	"8/68"	"8"	"68"	"854368.553588867"	"HCD"	"MS2"	"42.98196"	"29.9"	"100.000"	"77.2619"	"26382"	"26382"	"26367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.3"	""	"43.5"	""	"40.1"	""	"41.1"	""	"60.2"	"66.5"	""	"511"	"16"	"34.000"	"27.000"	"0.653718694104392"	"20"	"0.002588"	"0.02626"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"678.90997"	"1356.81267"	"1356.81389"	"-0.90"	"-0.00061"	"5/68"	"5"	"68"	"2621317.27496338"	"HCD"	"MS2"	"0"	"161.7"	"100.000"	"77.3008"	"26397"	"26397"	"26387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.2"	""	"256.8"	""	"190.4"	""	"237.5"	""	"293.3"	"326.6"	""	"511"	"34"	"34.000"	"27.000"	"0.0107248420409702"	"23"	"0.0001686"	"0.001725"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"678.91022"	"1356.81316"	"1356.81389"	"-0.54"	"-0.00037"	"5/68"	"5"	"68"	"2579038.72503662"	"HCD"	"MS2"	"0"	"150.3"	"100.000"	"77.4000"	"26467"	"26467"	"26455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.2"	""	"227.6"	""	"178.3"	""	"205.0"	""	"275.8"	"307.7"	""	"506"	"34"	"34.000"	"27.000"	"0.0105467954017995"	"27"	"0.0001991"	"0.002548"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"452.94260"	"1356.81324"	"1356.81389"	"-0.48"	"-0.00022"	"9/68"	"9"	"68"	"910624.52331543"	"HCD"	"MS2"	"33.18806"	"30.5"	"100.000"	"77.3380"	"26442"	"26442"	"26428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.8"	""	"43.5"	""	"41.1"	""	"47.6"	"0.2"	"56.6"	"61.0"	""	"509"	"28"	"34.000"	"27.000"	"0.0415611720739108"	"24"	"0.001951"	"0.01724"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"678.91028"	"1356.81328"	"1356.81389"	"-0.45"	"-0.00030"	"5/68"	"5"	"68"	"1426756.14886475"	"HCD"	"MS2"	"20.14738"	"92.2"	"100.000"	"77.0304"	"26290"	"26290"	"26276"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.1"	""	"143.3"	""	"115.3"	""	"125.6"	""	"159.7"	"172.6"	""	"510"	"34"	"34.000"	"27.000"	"0.0113380973204623"	"23"	"0.0001686"	"0.001384"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPSPIEK"	"[K].dLPSPIEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"678.91046"	"1356.81365"	"1356.81389"	"-0.18"	"-0.00012"	"6/68"	"6"	"68"	"513236.306213379"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"77.6102"	"26522"	"26522"	"26503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.2"	""	"52.7"	""	"45.8"	""	"46.2"	"0.1"	"71.4"	"64.9"	""	"508"	"28"	"34.000"	"27.000"	"0.0374829459452077"	"20"	"0.0003938"	"0.006342"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYSNNQYAR"	"[R].iYSNNQYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"679.35553"	"1357.70378"	"1357.70618"	"-1.77"	"-0.00120"	"8/74"	"8"	"74"	"808265.820922852"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"38.3833"	"10607"	"10607"	"10582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.0"	""	"63.7"	""	"74.0"	""	"81.5"	"1.2"	"90.5"	"93.5"	""	"614"	"27"	"34.000"	"27.000"	"0.0616791493470879"	"18"	"0"	"0.000266"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYSNNQYAR"	"[R].iYSNNQYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"679.35614"	"1357.70500"	"1357.70618"	"-0.87"	"-0.00059"	"5/74"	"5"	"74"	"810496.049560547"	"HCD"	"MS2"	"19.72149"	"52.0"	"100.000"	"38.2982"	"10608"	"10608"	"10581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.1"	""	"64.9"	""	"79.4"	""	"82.2"	""	"105.7"	"83.8"	""	"689"	"22"	"35.000"	"28.000"	"0.216366104611188"	"20"	"0.0001686"	"0.001306"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDEEFTK"	"[R].mDEEFTk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"679.35846"	"1357.70964"	"1357.70737"	"1.67"	"0.00113"	"6/56"	"6"	"56"	"1308708.90216064"	"HCD"	"MS2"	"18.88493"	"95.1"	"100.000"	"65.7847"	"21763"	"21763"	"21741"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.4"	""	"116.6"	""	"105.7"	""	"137.4"	"0.2"	"205.7"	"204.3"	""	"675"	"15"	"35.000"	"28.000"	"0.986901427522125"	"18"	"0.004357"	"0.05131"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPDMAVPDVR"	"[K].iPDmAVPDVR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"679.37054"	"1357.73381"	"1357.73470"	"-0.66"	"-0.00045"	"7/82"	"7"	"82"	"2805718.0480957"	"HCD"	"MS2"	"44.58603"	"88.4"	"100.000"	"71.1885"	"23921"	"23921"	"23902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.6"	""	"140.9"	""	"122.6"	""	"126.0"	""	"155.0"	"139.0"	""	"718"	"25"	"35.000"	"28.000"	"0.123053635370176"	"28"	"0.001103"	"0.009032"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLVVAHDDGR"	"[R].fLVVAHDDGR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"P85845"	"Fascin OS=Rattus norvegicus OX=10116 GN=Fscn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"453.25223"	"1357.74213"	"1357.74256"	"-0.32"	"-0.00014"	"7/74"	"7"	"74"	"1988562.44665527"	"HCD"	"MS2"	"4.237636"	"50.3"	"100.000"	"54.7050"	"17233"	"17233"	"17216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.6"	""	"60.8"	""	"76.8"	""	"91.7"	""	"93.0"	"91.8"	""	"733"	"49"	"35.000"	"28.000"	"0.000476512150349201"	"19"	"0"	"0.0001652"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"679.37964"	"1357.75200"	"1357.75246"	"-0.34"	"-0.00023"	"8/84"	"8"	"84"	"5586404.7902832"	"HCD"	"MS2"	"0"	"208.7"	"100.000"	"87.7783"	"30628"	"30628"	"30617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"321.4"	""	"313.6"	""	"318.6"	""	"299.3"	""	"335.9"	"387.9"	""	"756"	"43"	"35.000"	"28.000"	"0.00176397245758801"	"22"	"0"	"2.858E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"679.37970"	"1357.75212"	"1357.75246"	"-0.25"	"-0.00017"	"8/84"	"8"	"84"	"2897277.47521973"	"HCD"	"MS2"	"4.643769"	"121.0"	"100.000"	"88.0574"	"30739"	"30739"	"30730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.2"	""	"179.2"	""	"174.6"	""	"179.4"	""	"211.2"	"228.5"	""	"756"	"41"	"35.000"	"28.000"	"0.00273206985761621"	"22"	"0"	"4.038E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"679.37982"	"1357.75237"	"1357.75246"	"-0.07"	"-0.00005"	"8/84"	"8"	"84"	"2093167.57745361"	"HCD"	"MS2"	"7.259813"	"92.4"	"100.000"	"88.0377"	"30769"	"30769"	"30752"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.4"	""	"121.0"	""	"137.1"	""	"136.5"	"4.4"	"166.9"	"171.9"	""	"756"	"45"	"35.000"	"28.000"	"0.00124020020796759"	"21"	"0"	"1.728E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"679.37982"	"1357.75237"	"1357.75246"	"-0.07"	"-0.00005"	"8/84"	"8"	"84"	"5667307.24084473"	"HCD"	"MS2"	"0"	"219.8"	"100.000"	"87.7473"	"30651"	"30651"	"30635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"344.8"	""	"318.5"	""	"321.3"	""	"338.6"	""	"378.6"	"379.4"	""	"756"	"44"	"35.000"	"28.000"	"0.00136927853401512"	"24"	"0"	"2.578E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"679.38007"	"1357.75286"	"1357.75246"	"0.29"	"0.00020"	"8/84"	"8"	"84"	"1716282.92883301"	"HCD"	"MS2"	"2.71254"	"73.0"	"100.000"	"87.4499"	"30531"	"30531"	"30514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.3"	""	"108.9"	""	"107.5"	""	"110.0"	"6.2"	"114.4"	"127.1"	""	"765"	"42"	"35.000"	"28.000"	"0.00240786114942878"	"19"	"0"	"2.811E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"679.38013"	"1357.75298"	"1357.75246"	"0.38"	"0.00026"	"5/84"	"5"	"84"	"376940.713684082"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"88.3545"	"30858"	"30858"	"30839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"29.7"	""	"30.2"	""	"28.9"	""	"34.7"	"32.7"	""	"765"	"32"	"35.000"	"28.000"	"0.0229948954587354"	"20"	"0"	"0.0002559"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGDPLLEDTR"	"[K].iGDPLLEDTR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"679.38055"	"1357.75383"	"1357.75246"	"1.01"	"0.00069"	"6/84"	"6"	"84"	"1284879.79528809"	"HCD"	"MS2"	"3.781945"	"57.0"	"100.000"	"87.4899"	"30511"	"30511"	"30497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.5"	""	"80.7"	""	"90.4"	""	"82.2"	"4.5"	"86.9"	"102.0"	""	"761"	"43"	"35.000"	"28.000"	"0.00188953378311853"	"19"	"0"	"2.971E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"679.38385"	"1357.76042"	"1357.76369"	"-2.41"	"-0.00164"	"7/94"	"7"	"94"	"703873.40020752"	"HCD"	"MS2"	"33.74002"	"45.7"	"100.000"	"69.1336"	"23086"	"23086"	"23062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"56.7"	""	"61.1"	""	"83.7"	""	"87.9"	"76.0"	""	"690"	"39"	"35.000"	"28.000"	"0.00411925896040174"	"24"	"0"	"0.0001356"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNLQGDIVDR"	"[K].vNLQGDIVDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"679.38458"	"1357.76189"	"1357.76369"	"-1.33"	"-0.00090"	"7/94"	"7"	"94"	"894981.185791016"	"HCD"	"MS2"	"31.33524"	"57.8"	"100.000"	"69.2664"	"23174"	"23174"	"23152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"78.8"	""	"70.6"	""	"98.3"	""	"108.6"	"109.1"	""	"707"	"43"	"35.000"	"28.000"	"0.00173136812646746"	""	"0"	"0.0003121"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQTEGLSPR"	"[K].qLQTEGLSPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"679.38470"	"1357.76213"	"1357.76369"	"-1.15"	"-0.00078"	"8/98"	"8"	"98"	"999371.235656738"	"HCD"	"MS2"	"21.90164"	"63.9"	"100.000"	"45.6445"	"13555"	"13555"	"13525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.2"	""	"82.9"	""	"91.6"	""	"110.3"	"1.8"	"114.7"	"100.9"	""	"707"	"53"	"35.000"	"28.000"	"0.000164584684060366"	"26"	"0"	"0.000103"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQTEGLSPR"	"[K].qLQTEGLSPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"679.38470"	"1357.76213"	"1357.76369"	"-1.15"	"-0.00078"	"8/98"	"8"	"98"	"1614285.49432373"	"HCD"	"MS2"	"0"	"92.9"	"100.000"	"45.3950"	"13487"	"13487"	"13464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.9"	""	"124.3"	""	"128.7"	""	"156.3"	"0.5"	"166.3"	"151.2"	""	"707"	"53"	"35.000"	"28.000"	"0.000163828486126778"	"26"	"0"	"3.648E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQTEGLSPR"	"[K].qLQTEGLSPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"679.38477"	"1357.76225"	"1357.76369"	"-1.06"	"-0.00072"	"8/98"	"8"	"98"	"2470527.12567139"	"HCD"	"MS2"	"16.47733"	"120.8"	"100.000"	"45.9322"	"13672"	"13672"	"13653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.2"	""	"156.7"	""	"166.9"	""	"205.9"	""	"215.5"	"207.3"	""	"707"	"43"	"35.000"	"28.000"	"0.00171154931940979"	"23"	"0"	"3.59E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"679.38483"	"1357.76238"	"1357.76369"	"-0.97"	"-0.00066"	"7/82"	"7"	"82"	"2416858.12445068"	"HCD"	"MS2"	"1.323533"	"124.5"	"100.000"	"80.3426"	"27661"	"27661"	"27646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.7"	""	"102.1"	""	"106.0"	""	"224.6"	""	"297.4"	"328.3"	""	"707"	"42"	"35.000"	"28.000"	"0.00247394145586804"	""	"9.9E-05"	"0.0004964"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"679.38501"	"1357.76274"	"1357.76369"	"-0.70"	"-0.00048"	"7/82"	"7"	"82"	"2616608.94140625"	"HCD"	"MS2"	"2.699651"	"129.8"	"100.000"	"80.2462"	"27595"	"27595"	"27578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.0"	""	"107.2"	""	"120.2"	""	"226.3"	"0.6"	"313.7"	"333.6"	""	"705"	"43"	"35.000"	"28.000"	"0.00174646192258689"	""	"0"	"0.0002077"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLPDSVQIR"	"[R].nSLPDSVQIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"679.38513"	"1357.76299"	"1357.76369"	"-0.52"	"-0.00035"	"9/98"	"9"	"98"	"2244871.49517822"	"HCD"	"MS2"	"47.41092"	"126.2"	"100.000"	"60.1470"	"19441"	"19441"	"19422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.8"	""	"142.3"	""	"162.6"	""	"204.2"	"1.5"	"268.0"	"275.3"	""	"705"	"24"	"35.000"	"28.000"	"0.138407339728359"	"26"	"0"	"0.0003177"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLPDSVQIR"	"[R].nSLPDSVQIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"Q3KRD8"	"Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"679.38519"	"1357.76311"	"1357.76369"	"-0.43"	"-0.00029"	"7/98"	"7"	"98"	"2272579.81384277"	"HCD"	"MS2"	"52.50707"	"121.1"	"100.000"	"59.9625"	"19399"	"19399"	"19382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.2"	""	"137.4"	""	"153.1"	""	"194.5"	""	"248.2"	"271.8"	""	"710"	"20"	"35.000"	"28.000"	"0.365787072756774"	"23"	"0"	"0.0002751"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQTEGLSPR"	"[K].qLQTEGLSPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"679.38525"	"1357.76323"	"1357.76369"	"-0.34"	"-0.00023"	"7/98"	"7"	"98"	"1581476.19311523"	"HCD"	"MS2"	"22.69578"	"78.4"	"100.000"	"45.7033"	"13613"	"13613"	"13592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"99.7"	""	"99.1"	""	"154.2"	"0.0"	"136.0"	"145.1"	""	"709"	"37"	"35.000"	"28.000"	"0.00670835812809644"	"20"	"0"	"9.954E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"679.38531"	"1357.76335"	"1357.76369"	"-0.25"	"-0.00017"	"7/82"	"7"	"82"	"1343219.57354736"	"HCD"	"MS2"	"38.42228"	"70.9"	"100.000"	"80.0617"	"27547"	"27547"	"27524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.3"	""	"61.5"	""	"63.3"	""	"138.5"	"1.3"	"153.9"	"170.5"	""	"709"	"36"	"35.000"	"28.000"	"0.00962977720803455"	"25"	"0"	"0.0003938"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNQELENLR"	"[R].lNQELENLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"Q811A2"	"Bone marrow stromal antigen 2 OS=Rattus norvegicus OX=10116 GN=Bst2 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"679.38544"	"1357.76360"	"1357.76369"	"-0.07"	"-0.00005"	"8/82"	"8"	"82"	"1197899.11138916"	"HCD"	"MS2"	"16.917"	"65.8"	"100.000"	"79.9611"	"27479"	"27479"	"27462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.8"	""	"52.3"	""	"65.6"	""	"110.1"	"2.2"	"149.9"	"158.1"	""	"700"	"28"	"35.000"	"28.000"	"0.050242130167378"	"24"	"9.9E-05"	"0.0005476"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVLSQTEAR"	"[K].qPVLSQTEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"679.38550"	"1357.76372"	"1357.76369"	"0.02"	"0.00001"	"9/96"	"9"	"96"	"1171342.68334961"	"HCD"	"MS2"	"11.44556"	"58.0"	"100.000"	"35.6859"	"9550"	"9550"	"9528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.0"	""	"66.6"	""	"79.9"	""	"96.0"	""	"118.4"	"104.2"	""	"700"	"36"	"35.000"	"28.000"	"0.00849313533278846"	"27"	"0"	"5.458E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPVLSQTEAR"	"[K].qPVLSQTEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"P34067"	"Proteasome subunit beta type-4 OS=Rattus norvegicus OX=10116 GN=Psmb4 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"679.38568"	"1357.76409"	"1357.76369"	"0.29"	"0.00020"	"3/96"	"3"	"96"	"189655.596130371"	"HCD"	"MS2"	"100"	"14.0"	"100.000"	"36.0438"	"9659"	"9659"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"20.9"	""	"16.4"	""	"21.5"	"1.0"	"33.1"	"25.2"	""	"702"	"10"	"35.000"	"28.000"	"3.57525577206995"	"20"	"0.008868"	"0.1123"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YELEAFK"	"[K].yELEAFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"679.39136"	"1357.77544"	"1357.77677"	"-0.98"	"-0.00067"	"5/52"	"5"	"52"	"552308.059326172"	"HCD"	"MS2"	"48.15463"	"47.6"	"100.000"	"96.2698"	"34054"	"34054"	"34037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"57.8"	""	"63.2"	""	"74.1"	"0.4"	"92.9"	"101.4"	""	"700"	"24"	"35.000"	"28.000"	"0.153132736805388"	"24"	"0.001261"	"0.01014"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YELEAFK"	"[K].yELEAFk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"679.39172"	"1357.77617"	"1357.77677"	"-0.44"	"-0.00030"	"10/52"	"10"	"52"	"511457.341918945"	"HCD"	"MS2"	"37.70596"	"43.4"	"100.000"	"96.3614"	"34124"	"34124"	"34100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.0"	""	"52.7"	""	"54.4"	""	"68.2"	""	"92.2"	"87.9"	""	"705"	"22"	"35.000"	"28.000"	"0.241078855666704"	"24"	"0.001049"	"0.008703"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"679.39771"	"1357.78813"	"1357.78885"	"-0.53"	"-0.00036"	"7/82"	"7"	"82"	"2786852.25939941"	"HCD"	"MS2"	"7.190546"	"108.6"	"100.000"	"90.0159"	"31526"	"31526"	"31507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.7"	""	"143.2"	""	"153.7"	""	"177.6"	""	"191.6"	"199.8"	""	"738"	"45"	"35.000"	"28.000"	"0.00120788716410291"	"27"	"0.0001991"	"0.002519"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6038"	"0.0000"	"1"	"1"	"1"	"679.39801"	"1357.78874"	"1357.78885"	"-0.08"	"-0.00005"	"6/82"	"6"	"82"	"2750159.28063965"	"HCD"	"MS2"	"4.007751"	"106.0"	"100.000"	"89.9113"	"31523"	"31523"	"31509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.9"	""	"133.2"	""	"159.1"	""	"173.9"	""	"187.7"	"199.6"	""	"753"	"53"	"35.000"	"28.000"	"0.000194878972229389"	""	"0.0001686"	"0.001118"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"679.39813"	"1357.78899"	"1357.78885"	"0.10"	"0.00007"	"7/82"	"7"	"82"	"541725.906738281"	"HCD"	"MS2"	"11.01345"	"27.3"	"100.000"	"90.3476"	"31660"	"31660"	"31642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.5"	""	"38.6"	""	"39.5"	""	"39.7"	"1.1"	"45.6"	"54.2"	""	"753"	"40"	"35.000"	"28.000"	"0.00415685600393131"	"25"	"0.0001686"	"0.001683"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSTPDLEVR"	"[R].vLSTPDLEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"679.39813"	"1357.78899"	"1357.78885"	"0.10"	"0.00007"	"7/82"	"7"	"82"	"716855.616577148"	"HCD"	"MS2"	"7.524124"	"37.4"	"100.000"	"90.2082"	"31642"	"31642"	"31625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.0"	""	"47.0"	""	"54.8"	""	"53.6"	""	"77.2"	"73.4"	""	"753"	"44"	"35.000"	"28.000"	"0.00165487418212341"	"26"	"0"	"0.0003014"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPADNEK"	"[K].lIPADNEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"679.40765"	"1357.80803"	"1357.80914"	"-0.81"	"-0.00055"	"7/64"	"7"	"64"	"1114054.62017822"	"HCD"	"MS2"	"26.13803"	"75.0"	"100.000"	"59.6954"	"19291"	"19291"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.8"	""	"78.4"	""	"82.0"	""	"123.5"	"0.8"	"165.4"	"172.5"	""	"615"	"24"	"34.000"	"27.000"	"0.124120958337539"	"24"	"0.009411"	"0.1232"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIPADNEK"	"[K].lIPADNEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.2083"	"0.0000"	"1"	"1"	"1"	"679.40826"	"1357.80925"	"1357.80914"	"0.08"	"0.00006"	"7/64"	"7"	"64"	"1272170.96594238"	"HCD"	"MS2"	"22.19268"	"84.5"	"100.000"	"59.8682"	"19328"	"19328"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.7"	""	"87.8"	""	"96.9"	""	"148.5"	"3.2"	"196.2"	"167.0"	""	"619"	"24"	"34.000"	"27.000"	"0.12378290005106"	""	"0.006958"	"0.08789"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSGAPIK"	"[K].vLDSGAPIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"679.42621"	"1357.84514"	"1357.84552"	"-0.28"	"-0.00019"	"14/66"	"14"	"66"	"1570311.29119873"	"HCD"	"MS2"	"12.35033"	"106.5"	"100.000"	"71.7893"	"24166"	"24166"	"24145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.0"	""	"138.0"	""	"137.7"	""	"177.3"	"0.5"	"207.7"	"209.9"	""	"471"	"47"	"33.000"	"26.000"	"0.000452888102158343"	""	"0"	"2.976E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSGAPIK"	"[K].vLDSGAPIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"679.42627"	"1357.84526"	"1357.84552"	"-0.19"	"-0.00013"	"10/66"	"10"	"66"	"1211417.27105713"	"HCD"	"MS2"	"60.66462"	"75.3"	"100.000"	"71.5543"	"24101"	"24101"	"24080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.7"	""	"124.4"	""	"101.9"	""	"116.2"	""	"132.0"	"125.8"	""	"471"	"22"	"33.000"	"26.000"	"0.147228169148674"	"19"	"0"	"0.0001963"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSGAPIK"	"[K].vLDSGAPIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"679.42639"	"1357.84551"	"1357.84552"	"-0.01"	"-0.00001"	"8/66"	"8"	"66"	"1691181.52819824"	"HCD"	"MS2"	"12.46712"	"118.3"	"100.000"	"71.8466"	"24220"	"24220"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.0"	"2.6"	"165.8"	""	"163.2"	""	"187.8"	""	"239.1"	"225.6"	""	"471"	"52"	"33.000"	"26.000"	"0.000133349352568509"	"26"	"0"	"4.038E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLDSGAPIK"	"[K].vLDSGAPIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"679.42743"	"1357.84758"	"1357.84552"	"1.52"	"0.00103"	"6/66"	"6"	"66"	"1362371.45092773"	"HCD"	"MS2"	"53.39957"	"83.4"	"100.000"	"71.4926"	"24045"	"24045"	"24021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.3"	""	"133.9"	""	"121.3"	""	"121.5"	"1.8"	"150.5"	"148.3"	""	"466"	"29"	"33.000"	"26.000"	"0.0299471791766862"	"22"	"0.0001686"	"0.001444"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGVAFSSGER"	"[K].gYGVAFSSGER.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P20812"	"Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"P11711; P20812"	"Cytochrome P450 2A1 OS=Rattus norvegicus OX=10116 GN=Cyp2a1 PE=1 SV=2; Cytochrome P450 2A3 OS=Rattus norvegicus OX=10116 GN=Cyp2a3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.84698"	"1358.68669"	"1358.69019"	"-2.58"	"-0.00175"	"8/86"	"8"	"86"	"541268.032531738"	"HCD"	"MS2"	"0"	"46.8"	"100.000"	"52.8851"	"16525"	"16525"	"16498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.9"	""	"79.2"	""	"77.9"	""	"57.4"	"1.0"	"82.2"	"70.8"	""	"565"	"28"	"34.000"	"27.000"	"0.0417848119657519"	"14"	"0"	"0.0003801"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); M1(Oxidation); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"679.85461"	"1358.70195"	"1358.70262"	"-0.49"	"-0.00034"	"7/64"	"7"	"64"	"830510.456115723"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"42.0877"	"12140"	"12140"	"12113"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"65.7"	""	"68.4"	""	"166.7"	"0.7"	"114.5"	"106.6"	""	"662"	"28"	"35.000"	"28.000"	"0.0558249051403674"	"16"	"0.007443"	"0.0949"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFSAENGK"	"[R].mFSAEnGk.[-]"	"N-Term(TMT6plex); M1(Oxidation); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"679.85480"	"1358.70232"	"1358.70262"	"-0.23"	"-0.00015"	"7/64"	"7"	"64"	"630349.621398926"	"HCD"	"MS2"	"0"	"52.4"	"100.000"	"42.2628"	"12177"	"12177"	"12152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"48.8"	""	"63.2"	""	"126.4"	"1.7"	"108.7"	"81.1"	""	"651"	"28"	"35.000"	"28.000"	"0.0572204136343555"	"16"	"0.005673"	"0.07087"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVSADAYK"	"[K].mVSADAYk.[I]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"679.87695"	"1358.74663"	"1358.73901"	"5.61"	"0.00381"	"7/60"	"7"	"60"	"434429.816223145"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"44.5698"	"13118"	"13118"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.2"	""	"49.1"	""	"55.2"	""	"90.6"	"0.8"	"81.9"	"75.2"	""	"761"	"31"	"35.000"	"28.000"	"0.0332931326474039"	"18"	"0.008029"	"0.1017"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVDNITGQR"	"[R].nLVDNITGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"679.88147"	"1358.75566"	"1358.75894"	"-2.41"	"-0.00164"	"5/96"	"5"	"96"	"277715.192321777"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"64.4469"	"21184"	"21184"	"21168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"34.4"	""	"30.1"	""	"32.5"	""	"43.1"	"43.2"	""	"756"	"23"	"35.000"	"28.000"	"0.17238195422959"	"24"	"0.0008247"	"0.007621"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITGGAAAQDGR"	"[K].iITGGAAAQDGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"679.88202"	"1358.75676"	"1358.75894"	"-1.61"	"-0.00109"	"8/108"	"8"	"108"	"458078.513793945"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"39.9470"	"11240"	"11240"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"38.2"	""	"44.3"	""	"51.4"	""	"42.2"	"50.7"	""	"763"	"45"	"35.000"	"28.000"	"0.00116277193854308"	"24"	"0"	"4.121E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NLVDNITGQR"	"[R].nLVDNITGQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"679.88239"	"1358.75749"	"1358.75894"	"-1.07"	"-0.00072"	"6/96"	"6"	"96"	"231984.094543457"	"HCD"	"MS2"	"33.68758"	"21.3"	"100.000"	"64.4571"	"21222"	"21222"	"21195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	""	"29.2"	""	"29.8"	""	"30.9"	""	"41.3"	"43.2"	""	"830"	"10"	"36.000"	"29.000"	"4.05553446696661"	"18"	"0.001615"	"0.0145"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IITGGAAAQDGR"	"[K].iITGGAAAQDGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"679.88312"	"1358.75896"	"1358.75894"	"0.01"	"0.00001"	"10/108"	"10"	"108"	"459753.084838867"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"39.8627"	"11240"	"11240"	"11222"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"35.3"	""	"40.3"	""	"40.5"	""	"43.2"	"45.0"	""	"833"	"58"	"36.000"	"29.000"	"7.05691693886312E-05"	"26"	"0"	"9.325E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GADINAPDK"	"[K].gADINAPDk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"679.88739"	"1358.76750"	"1358.76800"	"-0.37"	"-0.00025"	"7/82"	"7"	"82"	"901504.647827148"	"HCD"	"MS2"	"41.74894"	"79.2"	"100.000"	"42.7800"	"12422"	"12422"	"12398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.8"	""	"70.0"	""	"88.1"	""	"153.3"	"1.0"	"167.3"	"174.3"	""	"793"	"35"	"35.000"	"28.000"	"0.011435184909897"	"25"	"0.0001686"	"0.001203"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQDSVPK"	"[K].nIQDSVPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"453.60507"	"1358.80066"	"1358.80439"	"-2.74"	"-0.00124"	"7/72"	"7"	"72"	"1246574.34527588"	"HCD"	"MS2"	"52.39223"	"74.5"	"100.000"	"50.1414"	"15412"	"15412"	"15387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.3"	""	"90.7"	""	"94.9"	""	"130.3"	"0.4"	"151.8"	"144.6"	""	"842"	"19"	"36.000"	"29.000"	"0.562706712466052"	"20"	"0.009514"	"0.1262"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQDSVPK"	"[K].nIQDSVPk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"679.90564"	"1358.80400"	"1358.80439"	"-0.28"	"-0.00019"	"5/72"	"5"	"72"	"574537.014221191"	"HCD"	"MS2"	"15.93851"	"49.9"	"100.000"	"50.4899"	"15519"	"15519"	"15494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.8"	""	"63.8"	""	"65.6"	""	"84.2"	""	"93.3"	"97.2"	""	"816"	"29"	"36.000"	"29.000"	"0.046415193261596"	"25"	"0.0001686"	"0.001252"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"680.35828"	"1359.70928"	"1359.71060"	"-0.97"	"-0.00066"	"8/84"	"8"	"84"	"2930787.47302246"	"HCD"	"MS2"	"28.30128"	"160.2"	"100.000"	"60.1791"	"19454"	"19454"	"19435"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.2"	""	"206.2"	""	"179.7"	""	"257.3"	""	"329.2"	"386.2"	""	"685"	"41"	"35.000"	"28.000"	"0.0025041513609307"	"20"	"0"	"6.608E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"680.35870"	"1359.71013"	"1359.71060"	"-0.34"	"-0.00023"	"8/84"	"8"	"84"	"3243583.08685303"	"HCD"	"MS2"	"2.627733"	"168.7"	"100.000"	"60.8836"	"19773"	"19773"	"19760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.0"	""	"189.8"	""	"214.1"	""	"226.7"	""	"344.0"	"476.3"	""	"692"	"56"	"35.000"	"28.000"	"8.41542587139541E-05"	"23"	"0"	"6.239E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"680.35876"	"1359.71025"	"1359.71060"	"-0.25"	"-0.00017"	"8/84"	"8"	"84"	"16347092.5805664"	"HCD"	"MS2"	"0"	"513.3"	"66.766"	"60.3057"	"19539"	"19539"	"19525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"481.8"	""	"623.1"	""	"622.7"	""	"696.0"	"6.6"	"1064.4"	"1391.6"	""	"692"	"54"	"35.000"	"28.000"	"0.000131242984800894"	"21"	"0"	"7.898E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"680.35901"	"1359.71074"	"1359.71060"	"0.11"	"0.00007"	"8/84"	"8"	"84"	"18385565.8659668"	"HCD"	"MS2"	"0"	"333.0"	"40.343"	"60.7711"	"19696"	"19696"	"19679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.2"	""	"376.7"	""	"383.0"	""	"470.7"	"2.9"	"697.9"	"950.0"	""	"710"	"50"	"35.000"	"28.000"	"0.000321535073318861"	"23"	"0"	"0.0001086"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.35907"	"1359.71086"	"1359.71060"	"0.20"	"0.00013"	"7/84"	"7"	"84"	"1077392.66247559"	"HCD"	"MS2"	"54.87442"	"79.3"	"100.000"	"60.0293"	"19427"	"19427"	"19397"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.5"	""	"92.2"	""	"99.6"	""	"118.9"	""	"172.3"	"191.8"	""	"712"	"7"	"35.000"	"28.000"	"7.00567519135637"	"13"	"0.001951"	"0.01644"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"680.35907"	"1359.71086"	"1359.71060"	"0.20"	"0.00013"	"8/84"	"8"	"84"	"1545350.597229"	"HCD"	"MS2"	"2.43476"	"90.1"	"100.000"	"61.0793"	"19821"	"19821"	"19802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.9"	""	"114.8"	""	"115.7"	""	"122.8"	""	"172.6"	"247.0"	""	"712"	"48"	"35.000"	"28.000"	"0.000545067136358803"	"21"	"0"	"3.221E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"680.35919"	"1359.71111"	"1359.71060"	"0.38"	"0.00026"	"8/84"	"8"	"84"	"19817444.7365723"	"HCD"	"MS2"	"0.1171376"	"517.8"	"55.912"	"60.4696"	"19573"	"19573"	"19556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"490.2"	""	"616.4"	""	"625.2"	""	"722.3"	""	"1050.0"	"1431.4"	""	"713"	"54"	"35.000"	"28.000"	"0.000132757643279754"	"23"	"0"	"5.046E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFVTTAER"	"[R].gYSFVTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"680.35931"	"1359.71135"	"1359.71060"	"0.56"	"0.00038"	"8/84"	"8"	"84"	"22426605.2817383"	"HCD"	"MS2"	"0"	"385.5"	"35.881"	"60.5982"	"19658"	"19658"	"19644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"361.5"	""	"463.3"	""	"452.5"	""	"527.4"	""	"801.1"	"1066.4"	""	"713"	"54"	"35.000"	"28.000"	"0.000133677875300515"	"26"	"0"	"9.847E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLENYDAIR"	"[R].hLENYDAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"453.91104"	"1359.71857"	"1359.72183"	"-2.40"	"-0.00109"	"7/80"	"7"	"80"	"3163634.1817627"	"HCD"	"MS2"	"43.81488"	"102.4"	"100.000"	"38.6821"	"10729"	"10729"	"10702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.6"	""	"120.0"	""	"152.9"	""	"173.0"	"4.3"	"193.2"	"177.4"	""	"729"	"44"	"35.000"	"28.000"	"0.00152299168642694"	"26"	"9.9E-05"	"0.001009"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLENYDAIR"	"[R].hLENYDAIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"Q91Y78"	"Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus norvegicus OX=10116 GN=Uchl3 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"453.91113"	"1359.71885"	"1359.72183"	"-2.19"	"-0.00099"	"8/80"	"8"	"80"	"2879224.49645996"	"HCD"	"MS2"	"56.56181"	"97.5"	"100.000"	"38.5535"	"10712"	"10712"	"10692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.0"	""	"126.0"	""	"131.2"	""	"166.0"	"2.8"	"179.1"	"184.8"	""	"728"	"45"	"35.000"	"28.000"	"0.00121646994569506"	"24"	"9.9E-05"	"0.0004464"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WINATDPSAR"	"[K].wINATDPSAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"680.36371"	"1359.72014"	"1359.72183"	"-1.24"	"-0.00084"	"6/92"	"6"	"92"	"935417.289733887"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"63.3509"	"20773"	"20773"	"20750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.3"	""	"77.6"	""	"84.1"	""	"111.6"	""	"146.8"	"129.4"	""	"740"	"28"	"35.000"	"28.000"	"0.0648935785681452"	"23"	"9.9E-05"	"0.0008948"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WINATDPSAR"	"[K].wINATDPSAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"680.36523"	"1359.72319"	"1359.72183"	"1.00"	"0.00068"	"6/92"	"6"	"92"	"902882.421386719"	"HCD"	"MS2"	"7.130261"	"62.3"	"100.000"	"63.3846"	"20755"	"20755"	"20731"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"76.7"	""	"74.4"	""	"102.6"	"1.3"	"127.2"	"120.4"	""	"746"	"28"	"35.000"	"28.000"	"0.0630534467502937"	"23"	"0.0001991"	"0.003629"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTNFYGK"	"[R].gDTNFYGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"680.36865"	"1359.73003"	"1359.73089"	"-0.63"	"-0.00043"	"11/66"	"11"	"66"	"1586377.58746338"	"HCD"	"MS2"	"11.36851"	"153.8"	"100.000"	"53.6697"	"16811"	"16811"	"16793"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.1"	""	"198.7"	""	"212.1"	""	"213.3"	""	"262.4"	"307.5"	""	"780"	"29"	"35.000"	"28.000"	"0.048424439996104"	"21"	"0.0001991"	"0.002303"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTNFYGK"	"[R].gDTNFYGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"680.36890"	"1359.73052"	"1359.73089"	"-0.27"	"-0.00019"	"6/66"	"6"	"66"	"1292498.284729"	"HCD"	"MS2"	"15.99242"	"123.5"	"100.000"	"53.3960"	"16733"	"16733"	"16712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.8"	""	"153.9"	""	"171.3"	""	"184.8"	""	"217.8"	"231.6"	""	"780"	"23"	"35.000"	"28.000"	"0.187527345895394"	"20"	"0.0001991"	"0.004812"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTNFYGK"	"[R].gDTNFYGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"680.36896"	"1359.73064"	"1359.73089"	"-0.18"	"-0.00012"	"12/66"	"12"	"66"	"2722660.66467285"	"HCD"	"MS2"	"8.722787"	"261.9"	"100.000"	"53.0990"	"16612"	"16612"	"16593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"457.5"	""	"368.4"	""	"363.1"	""	"383.4"	""	"443.5"	"463.7"	""	"780"	"33"	"35.000"	"28.000"	"0.0198182182598619"	"22"	"0.0001991"	"0.002024"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTNFYGK"	"[R].gDTNFYGk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"680.36920"	"1359.73113"	"1359.73089"	"0.18"	"0.00012"	"12/66"	"12"	"66"	"2015856.66345215"	"HCD"	"MS2"	"7.863256"	"201.9"	"100.000"	"53.3706"	"16689"	"16689"	"16666"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"351.8"	""	"283.5"	""	"284.6"	""	"295.8"	""	"328.9"	"364.8"	""	"812"	"31"	"36.000"	"29.000"	"0.0293444540262481"	"18"	"0.0001991"	"0.002089"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLTPDEEAR"	"[K].vTLTPDEEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"680.36945"	"1359.73161"	"1359.73173"	"-0.08"	"-0.00006"	"7/84"	"7"	"84"	"4427463.54193115"	"HCD"	"MS2"	"1.85616"	"184.9"	"100.000"	"49.4709"	"15104"	"15104"	"15090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.6"	""	"222.2"	""	"231.3"	""	"274.9"	""	"341.3"	"381.5"	""	"807"	"44"	"36.000"	"29.000"	"0.00148882461023056"	"22"	"0.0001991"	"0.0022"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTLTPDEEAR"	"[K].vTLTPDEEAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"680.36963"	"1359.73198"	"1359.73173"	"0.19"	"0.00013"	"7/84"	"7"	"84"	"4981251.77947998"	"HCD"	"MS2"	"0"	"213.5"	"100.000"	"49.1335"	"15001"	"15001"	"14985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"363.7"	""	"246.4"	""	"275.0"	""	"350.8"	"5.8"	"373.4"	"406.8"	""	"822"	"44"	"36.000"	"29.000"	"0.00146501415838186"	"23"	"0.0001991"	"0.00299"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"680.37622"	"1359.74516"	"1359.74698"	"-1.34"	"-0.00091"	"13/78"	"13"	"78"	"917218.901367188"	"HCD"	"MS2"	"17.60336"	"47.5"	"100.000"	"80.5661"	"27724"	"27724"	"27705"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.1"	""	"63.0"	""	"53.7"	""	"81.7"	""	"88.4"	"99.5"	""	"873"	"20"	"36.000"	"29.000"	"0.41113480888222"	"22"	"0.0001991"	"0.004687"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"453.92001"	"1359.74549"	"1359.74698"	"-1.10"	"-0.00050"	"8/78"	"8"	"78"	"2127884.33544922"	"HCD"	"MS2"	"11.22869"	"40.9"	"100.000"	"81.6363"	"28157"	"28157"	"28141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"51.7"	""	"40.6"	""	"68.8"	""	"74.3"	"94.5"	""	"865"	"32"	"36.000"	"29.000"	"0.0285749916263285"	"17"	"0.0001991"	"0.002882"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"453.92007"	"1359.74567"	"1359.74698"	"-0.96"	"-0.00044"	"9/78"	"9"	"78"	"966578.651733398"	"HCD"	"MS2"	"3.0878"	"23.8"	"100.000"	"82.5588"	"28528"	"28528"	"28507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"29.9"	""	"27.6"	""	"39.0"	""	"47.4"	"43.6"	""	"875"	"34"	"36.000"	"29.000"	"0.0188355392090124"	"16"	"0"	"0.0002839"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"453.92017"	"1359.74594"	"1359.74698"	"-0.76"	"-0.00035"	"8/78"	"8"	"78"	"2068740.83734131"	"HCD"	"MS2"	"14.52708"	"42.9"	"100.000"	"81.4608"	"28114"	"28114"	"28093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.2"	""	"51.9"	""	"38.3"	""	"73.0"	""	"89.5"	"94.7"	""	"875"	"35"	"36.000"	"29.000"	"0.0148928582994188"	"17"	"0.0001991"	"0.005945"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"453.92020"	"1359.74604"	"1359.74698"	"-0.70"	"-0.00032"	"8/78"	"8"	"78"	"1408615.0166626"	"HCD"	"MS2"	"3.141876"	"27.3"	"100.000"	"82.2476"	"28406"	"28406"	"28384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"33.9"	""	"37.0"	""	"44.9"	""	"47.3"	"50.2"	""	"872"	"40"	"36.000"	"29.000"	"0.00480271138960057"	"19"	"0"	"0.0002996"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"453.92023"	"1359.74613"	"1359.74698"	"-0.63"	"-0.00028"	"9/78"	"9"	"78"	"1246309.96191406"	"HCD"	"MS2"	"16.66634"	"26.4"	"100.000"	"81.0345"	"27914"	"27914"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.7"	""	"37.9"	""	"27.5"	""	"45.3"	"0.8"	"49.0"	"48.3"	""	"872"	"43"	"36.000"	"29.000"	"0.00239048756705492"	"22"	"0.0001686"	"0.001201"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"680.37671"	"1359.74614"	"1359.74698"	"-0.62"	"-0.00042"	"8/78"	"8"	"78"	"2363721.02764893"	"HCD"	"MS2"	"0.7754207"	"98.8"	"100.000"	"82.6653"	"28572"	"28572"	"28555"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.8"	""	"137.6"	""	"110.1"	""	"162.6"	"0.3"	"172.0"	"174.0"	""	"872"	"38"	"36.000"	"29.000"	"0.00684678182689429"	"20"	"9.9E-05"	"0.0006373"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"453.92026"	"1359.74622"	"1359.74698"	"-0.56"	"-0.00025"	"9/78"	"9"	"78"	"2207555.61590576"	"HCD"	"MS2"	"7.200429"	"40.2"	"100.000"	"81.7581"	"28235"	"28235"	"28216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.7"	""	"57.7"	""	"42.2"	""	"57.6"	""	"77.7"	"79.6"	""	"872"	"45"	"36.000"	"29.000"	"0.00125166033376276"	"22"	"9.9E-05"	"0.0006079"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"680.37677"	"1359.74626"	"1359.74698"	"-0.53"	"-0.00036"	"8/78"	"8"	"78"	"5035804.55218506"	"HCD"	"MS2"	"0.5941756"	"192.5"	"100.000"	"82.1207"	"28383"	"28383"	"28366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.4"	""	"262.3"	""	"192.0"	""	"323.1"	""	"316.0"	"337.9"	""	"872"	"49"	"36.000"	"29.000"	"0.000586795114368393"	"22"	"0"	"1.441E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"680.37677"	"1359.74626"	"1359.74698"	"-0.53"	"-0.00036"	"8/78"	"8"	"78"	"4569116.9788208"	"HCD"	"MS2"	"2.115601"	"186.8"	"100.000"	"81.1682"	"27968"	"27968"	"27952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.4"	""	"262.8"	""	"202.6"	""	"322.1"	""	"305.0"	"317.5"	""	"872"	"37"	"36.000"	"29.000"	"0.0081000274241998"	"20"	"0"	"9.958E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"453.92029"	"1359.74631"	"1359.74698"	"-0.49"	"-0.00022"	"9/78"	"9"	"78"	"1263299.49633789"	"HCD"	"MS2"	"23.33791"	"27.1"	"100.000"	"81.1380"	"27983"	"27983"	"27967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.0"	""	"36.3"	""	"31.4"	""	"51.3"	"3.1"	"42.8"	"43.6"	""	"880"	"41"	"36.000"	"29.000"	"0.00322442794581118"	"17"	"9.9E-05"	"0.0006332"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"453.92029"	"1359.74631"	"1359.74698"	"-0.49"	"-0.00022"	"8/78"	"8"	"78"	"1819449.605896"	"HCD"	"MS2"	"4.957439"	"33.2"	"100.000"	"82.0467"	"28352"	"28352"	"28334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.9"	""	"51.1"	""	"37.0"	""	"61.9"	"1.2"	"52.8"	"53.4"	""	"880"	"44"	"36.000"	"29.000"	"0.00156477780170353"	"21"	"9.9E-05"	"0.000569"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"680.37683"	"1359.74639"	"1359.74698"	"-0.44"	"-0.00030"	"8/78"	"8"	"78"	"3745503.29089355"	"HCD"	"MS2"	"0"	"156.9"	"100.000"	"82.4322"	"28506"	"28506"	"28490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.6"	""	"225.8"	""	"169.3"	""	"267.2"	""	"261.1"	"269.8"	""	"880"	"44"	"36.000"	"29.000"	"0.00194290996835458"	"20"	"0"	"5.064E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"453.92035"	"1359.74649"	"1359.74698"	"-0.36"	"-0.00016"	"9/78"	"9"	"78"	"1765062.80303955"	"HCD"	"MS2"	"2.577905"	"32.5"	"100.000"	"81.9432"	"28282"	"28282"	"28263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"46.9"	""	"32.7"	""	"49.3"	""	"60.2"	"64.2"	""	"880"	"43"	"36.000"	"29.000"	"0.00208186553943051"	"21"	"0.0001686"	"0.001071"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"680.37689"	"1359.74651"	"1359.74698"	"-0.35"	"-0.00024"	"8/78"	"8"	"78"	"5825038.27636719"	"HCD"	"MS2"	"7.033829"	"233.0"	"100.000"	"81.4474"	"28082"	"28082"	"28065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"404.2"	""	"308.4"	""	"228.7"	""	"429.3"	""	"406.2"	"429.1"	""	"880"	"36"	"36.000"	"29.000"	"0.0120907342736505"	"20"	"0"	"0.0001119"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"453.92038"	"1359.74659"	"1359.74698"	"-0.29"	"-0.00013"	"10/78"	"10"	"78"	"783674.669189453"	"HCD"	"MS2"	"19.82783"	"18.2"	"100.000"	"82.6787"	"28605"	"28605"	"28585"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"19.5"	""	"21.7"	""	"32.3"	""	"36.7"	"35.0"	""	"879"	"36"	"36.000"	"29.000"	"0.00999905320824324"	"22"	"9.9E-05"	"0.0004189"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"453.92038"	"1359.74659"	"1359.74698"	"-0.29"	"-0.00013"	"8/78"	"8"	"78"	"1267853.71905518"	"HCD"	"MS2"	"6.62215"	"27.3"	"100.000"	"82.3605"	"28480"	"28480"	"28458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"43.0"	""	"27.9"	""	"48.0"	"1.2"	"43.2"	"45.9"	""	"879"	"42"	"36.000"	"29.000"	"0.00293061575069387"	"20"	"9.9E-05"	"0.0005869"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"680.37695"	"1359.74663"	"1359.74698"	"-0.26"	"-0.00018"	"13/78"	"13"	"78"	"2863903.03704834"	"HCD"	"MS2"	"1.144431"	"118.6"	"100.000"	"80.8593"	"27844"	"27844"	"27830"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"222.8"	""	"168.5"	""	"138.5"	""	"187.0"	""	"206.7"	"198.8"	""	"880"	"34"	"36.000"	"29.000"	"0.016385235075201"	"21"	"0.0001991"	"0.003345"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"680.37695"	"1359.74663"	"1359.74698"	"-0.26"	"-0.00018"	"12/78"	"12"	"78"	"4699645.01965332"	"HCD"	"MS2"	"4.819481"	"194.8"	"100.000"	"81.2418"	"28025"	"28025"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"370.9"	""	"271.5"	""	"203.2"	""	"334.9"	"1.0"	"325.6"	"335.5"	""	"880"	"34"	"36.000"	"29.000"	"0.0183845361324514"	"20"	"9.9E-05"	"0.0007539"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"680.37701"	"1359.74675"	"1359.74698"	"-0.17"	"-0.00011"	"11/78"	"11"	"78"	"1033205.75469971"	"HCD"	"MS2"	"12.20867"	"50.5"	"100.000"	"83.2502"	"28808"	"28808"	"28791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.0"	""	"63.5"	""	"62.9"	""	"82.3"	""	"89.3"	"98.5"	""	"879"	"28"	"36.000"	"29.000"	"0.0756761238706349"	"20"	"0.0001686"	"0.001617"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"680.37701"	"1359.74675"	"1359.74698"	"-0.17"	"-0.00011"	"11/78"	"11"	"78"	"2720219.77172852"	"HCD"	"MS2"	"1.350097"	"108.4"	"100.000"	"80.9329"	"27901"	"27901"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.6"	""	"160.9"	""	"120.7"	""	"194.8"	""	"175.0"	"185.9"	""	"879"	"30"	"36.000"	"29.000"	"0.0458098510218357"	"22"	"0.0001991"	"0.005119"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"680.37701"	"1359.74675"	"1359.74698"	"-0.17"	"-0.00011"	"8/78"	"8"	"78"	"4849368.44671631"	"HCD"	"MS2"	"0"	"194.5"	"100.000"	"82.0540"	"28328"	"28328"	"28311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"361.4"	""	"270.8"	""	"211.1"	""	"334.2"	""	"336.6"	"327.6"	""	"879"	"35"	"36.000"	"29.000"	"0.0146203873672715"	"21"	"9.9E-05"	"0.0009303"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"453.92044"	"1359.74677"	"1359.74698"	"-0.16"	"-0.00007"	"9/78"	"9"	"78"	"1963809.93707275"	"HCD"	"MS2"	"14.2561"	"43.4"	"100.000"	"81.3273"	"28033"	"28033"	"28014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.0"	""	"50.4"	""	"46.2"	""	"74.8"	"1.0"	"80.7"	"92.7"	""	"879"	"30"	"36.000"	"29.000"	"0.042262859634962"	"18"	"0.0001686"	"0.001323"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"680.37708"	"1359.74687"	"1359.74698"	"-0.08"	"-0.00005"	"12/78"	"12"	"78"	"1483902.47064209"	"HCD"	"MS2"	"4.476045"	"69.1"	"100.000"	"83.0375"	"28750"	"28750"	"28732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.8"	""	"98.1"	""	"73.1"	""	"122.5"	""	"117.6"	"114.2"	""	"873"	"27"	"36.000"	"29.000"	"0.077980182642292"	"20"	"0.0001686"	"0.001048"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"680.37708"	"1359.74687"	"1359.74698"	"-0.08"	"-0.00005"	"8/78"	"8"	"78"	"3825978.06481934"	"HCD"	"MS2"	"0"	"151.9"	"100.000"	"82.3491"	"28448"	"28448"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.5"	""	"220.7"	""	"169.3"	""	"250.0"	""	"252.0"	"259.0"	""	"873"	"49"	"36.000"	"29.000"	"0.000594270603896388"	"23"	"0"	"3.221E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"680.37714"	"1359.74700"	"1359.74698"	"0.01"	"0.00001"	"13/78"	"13"	"78"	"1530919.8694458"	"HCD"	"MS2"	"3.049324"	"66.4"	"100.000"	"82.9600"	"28691"	"28691"	"28677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.7"	""	"88.7"	""	"75.0"	""	"121.1"	"1.2"	"114.8"	"118.9"	""	"873"	"34"	"36.000"	"29.000"	"0.0164053026971906"	"21"	"9.9E-05"	"0.0006062"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"680.37720"	"1359.74712"	"1359.74698"	"0.10"	"0.00007"	"8/78"	"8"	"78"	"2482488.73809814"	"HCD"	"MS2"	"3.880725"	"105.7"	"100.000"	"82.7411"	"28631"	"28631"	"28614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.8"	""	"155.7"	""	"106.7"	""	"200.8"	""	"166.7"	"173.1"	""	"893"	"36"	"36.000"	"29.000"	"0.010275937714729"	"20"	"0"	"2.885E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"680.37726"	"1359.74724"	"1359.74698"	"0.19"	"0.00013"	"7/78"	"7"	"78"	"5899161.8838501"	"HCD"	"MS2"	"0"	"234.3"	"100.000"	"81.7403"	"28200"	"28200"	"28187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"442.4"	""	"310.8"	""	"247.6"	""	"413.9"	""	"386.1"	"419.3"	""	"893"	"38"	"36.000"	"29.000"	"0.00702783348984166"	"21"	"0.0001686"	"0.001053"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"680.37726"	"1359.74724"	"1359.74698"	"0.19"	"0.00013"	"8/78"	"8"	"78"	"5829840.55810547"	"HCD"	"MS2"	"3.433177"	"217.9"	"100.000"	"81.8184"	"28260"	"28260"	"28243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"422.1"	""	"301.1"	""	"232.8"	""	"371.5"	""	"348.3"	"385.1"	""	"893"	"40"	"36.000"	"29.000"	"0.00467542896704727"	"21"	"0"	"4.068E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"680.37744"	"1359.74761"	"1359.74698"	"0.46"	"0.00031"	"8/78"	"8"	"78"	"1083544.31036377"	"HCD"	"MS2"	"22.02764"	"56.0"	"100.000"	"83.3282"	"28868"	"28868"	"28848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.3"	""	"72.9"	""	"60.8"	""	"91.9"	"0.1"	"106.4"	"113.3"	""	"890"	"33"	"36.000"	"29.000"	"0.0216950178096007"	"20"	"9.9E-05"	"0.0005403"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDSVPPVVR"	"[K].dFDSVPPVVR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"680.37756"	"1359.74785"	"1359.74698"	"0.64"	"0.00043"	"8/78"	"8"	"78"	"6116294.7265625"	"HCD"	"MS2"	"6.344014"	"250.4"	"100.000"	"81.5255"	"28141"	"28141"	"28125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"462.4"	""	"333.0"	""	"263.2"	""	"424.7"	"0.2"	"431.0"	"455.4"	""	"886"	"40"	"36.000"	"29.000"	"0.00427960539392488"	"22"	"0"	"0.000102"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"453.92368"	"1359.75647"	"1359.75822"	"-1.28"	"-0.00058"	"10/84"	"10"	"84"	"381962.975891113"	"HCD"	"MS2"	"14.99349"	"11.1"	"100.000"	"89.0380"	"31174"	"31174"	"31156"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"17.1"	""	"16.8"	""	"18.7"	""	"19.6"	"18.0"	""	"953"	"18"	"36.000"	"29.000"	"0.792616127901386"	"21"	"0.0001991"	"0.002087"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"453.92377"	"1359.75675"	"1359.75822"	"-1.08"	"-0.00049"	"10/84"	"10"	"84"	"464980.272399902"	"HCD"	"MS2"	"3.218934"	"13.8"	"100.000"	"89.2493"	"31219"	"31219"	"31202"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"18.7"	""	"16.1"	""	"23.7"	""	"21.9"	"27.9"	""	"953"	"18"	"36.000"	"29.000"	"0.781741026929581"	"19"	"0.001951"	"0.01697"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"453.92383"	"1359.75693"	"1359.75822"	"-0.94"	"-0.00043"	"8/84"	"8"	"84"	"528626.783630371"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"89.5288"	"31330"	"31330"	"31319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.8"	""	"21.4"	""	"21.8"	""	"21.5"	""	"20.4"	"28.3"	""	"955"	"10"	"36.000"	"29.000"	"4.52869816226178"	"13"	"0.001103"	"0.009007"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"453.92395"	"1359.75730"	"1359.75822"	"-0.67"	"-0.00031"	"10/84"	"10"	"84"	"504018.703308105"	"HCD"	"MS2"	"7.674942"	"14.4"	"100.000"	"89.4819"	"31351"	"31351"	"31338"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"14.5"	""	"20.8"	""	"28.9"	""	"24.0"	"30.4"	""	"949"	"14"	"36.000"	"29.000"	"1.75888002485832"	"14"	"0.0005778"	"0.007028"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"680.38232"	"1359.75737"	"1359.75822"	"-0.62"	"-0.00042"	"9/84"	"9"	"84"	"1261082.02441406"	"HCD"	"MS2"	"43.56428"	"41.7"	"100.000"	"88.7027"	"30998"	"30998"	"30982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"51.3"	""	"63.8"	""	"63.7"	""	"76.2"	"74.8"	""	"949"	"29"	"36.000"	"29.000"	"0.0665635102814649"	"22"	"0.0001686"	"0.001868"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"680.38232"	"1359.75737"	"1359.75822"	"-0.62"	"-0.00042"	"6/84"	"6"	"84"	"4335964.36633301"	"HCD"	"MS2"	"0"	"145.4"	"100.000"	"89.0001"	"31120"	"31120"	"31105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.4"	""	"200.1"	""	"199.2"	""	"245.3"	""	"282.4"	"259.5"	""	"949"	"46"	"36.000"	"29.000"	"0.0013159403896573"	""	"0"	"7.713E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"680.38239"	"1359.75749"	"1359.75822"	"-0.53"	"-0.00036"	"14/84"	"14"	"84"	"1242543.89379883"	"HCD"	"MS2"	"47.03787"	"41.1"	"100.000"	"88.5927"	"30993"	"30993"	"30978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"56.3"	""	"62.0"	""	"59.6"	""	"73.3"	"79.7"	""	"949"	"20"	"36.000"	"29.000"	"0.4626325830969"	"19"	"0"	"0.0002682"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"680.38239"	"1359.75749"	"1359.75822"	"-0.53"	"-0.00036"	"6/84"	"6"	"84"	"8345286.92510986"	"HCD"	"MS2"	"0.1574158"	"269.0"	"98.062"	"89.2910"	"31236"	"31236"	"31225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.9"	""	"347.7"	""	"401.8"	""	"434.7"	""	"520.1"	"485.8"	""	"949"	"46"	"36.000"	"29.000"	"0.00121404900333673"	""	"0"	"6.951E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"680.38245"	"1359.75762"	"1359.75822"	"-0.44"	"-0.00030"	"6/84"	"6"	"84"	"7818813.62158203"	"HCD"	"MS2"	"0.9360771"	"127.6"	"92.500"	"89.5844"	"31353"	"31353"	"31341"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.2"	""	"164.4"	""	"188.3"	""	"211.2"	"0.9"	"227.4"	"241.4"	""	"949"	"46"	"36.000"	"29.000"	"0.00131897394555178"	""	"0"	"0.0001548"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"680.38287"	"1359.75847"	"1359.75822"	"0.19"	"0.00013"	"6/84"	"6"	"84"	"8198950.99554443"	"HCD"	"MS2"	"0"	"267.2"	"100.000"	"89.1745"	"31229"	"31229"	"31213"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"372.8"	""	"363.0"	""	"364.7"	""	"454.1"	""	"498.3"	"482.7"	""	"956"	"49"	"36.000"	"29.000"	"0.000615783285709318"	""	"0"	"0.0001194"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"680.38300"	"1359.75871"	"1359.75822"	"0.37"	"0.00025"	"6/84"	"6"	"84"	"8060341.00744629"	"HCD"	"MS2"	"0.6800572"	"261.2"	"100.000"	"89.4494"	"31339"	"31339"	"31324"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"341.2"	""	"328.7"	""	"378.4"	""	"443.0"	""	"496.3"	"489.6"	""	"956"	"46"	"36.000"	"29.000"	"0.00134099727894092"	""	"0"	"0.000143"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"680.38306"	"1359.75884"	"1359.75822"	"0.46"	"0.00031"	"6/84"	"6"	"84"	"4585662.6831665"	"HCD"	"MS2"	"3.804595"	"154.5"	"100.000"	"89.7197"	"31447"	"31447"	"31434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.3"	""	"208.1"	""	"218.0"	""	"244.7"	""	"284.6"	"290.5"	""	"956"	"45"	"36.000"	"29.000"	"0.00139453011269256"	""	"0"	"0.0001374"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"680.38324"	"1359.75920"	"1359.75822"	"0.73"	"0.00049"	"9/84"	"9"	"84"	"3937624.51495361"	"HCD"	"MS2"	"11.01029"	"149.4"	"100.000"	"89.8960"	"31477"	"31477"	"31459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.4"	"2.5"	"189.7"	""	"211.5"	""	"245.6"	""	"288.9"	"273.4"	""	"918"	"30"	"36.000"	"29.000"	"0.0471859480840051"	"22"	"0"	"0.0001959"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLNADLR.[K]"	"N-Term(TMT6plex)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"680.38336"	"1359.75945"	"1359.75822"	"0.91"	"0.00062"	"6/84"	"6"	"84"	"4569741.70507813"	"HCD"	"MS2"	"0"	"143.2"	"100.000"	"88.8952"	"31117"	"31117"	"31100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.9"	"2.8"	"185.0"	""	"207.2"	""	"238.4"	""	"270.7"	"260.5"	""	"918"	"49"	"36.000"	"29.000"	"0.000591306544227148"	""	"0"	"3.41E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"680.39709"	"1359.78691"	"1359.78840"	"-1.09"	"-0.00074"	"8/78"	"8"	"78"	"1360761.91009521"	"HCD"	"MS2"	"51.43761"	"103.9"	"100.000"	"53.8400"	"16881"	"16881"	"16857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.0"	""	"118.4"	""	"134.3"	""	"173.0"	""	"198.9"	"194.4"	""	"849"	"44"	"36.000"	"29.000"	"0.00184025367875506"	"29"	"0"	"3.028E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"680.39740"	"1359.78752"	"1359.78840"	"-0.65"	"-0.00044"	"14/78"	"14"	"78"	"928444.018249512"	"HCD"	"MS2"	"18.60336"	"74.3"	"100.000"	"54.1691"	"17015"	"17015"	"16993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"89.9"	""	"88.1"	""	"120.4"	""	"163.1"	"146.6"	""	"849"	"29"	"36.000"	"29.000"	"0.0484036034819716"	"26"	"0.0001991"	"0.003863"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"680.39740"	"1359.78752"	"1359.78840"	"-0.65"	"-0.00044"	"8/78"	"8"	"78"	"1354772.58843994"	"HCD"	"MS2"	"36.2406"	"111.0"	"100.000"	"53.5247"	"16786"	"16786"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.2"	""	"129.7"	""	"165.2"	""	"172.7"	""	"213.4"	"213.6"	""	"849"	"43"	"36.000"	"29.000"	"0.00210318605996634"	"26"	"0"	"6.989E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAADPLASK"	"[K].eAADPLASk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"680.39752"	"1359.78777"	"1359.78840"	"-0.47"	"-0.00032"	"7/78"	"7"	"78"	"890030.043334961"	"HCD"	"MS2"	"17.73001"	"71.3"	"100.000"	"53.8517"	"16919"	"16919"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.2"	""	"82.3"	""	"90.1"	""	"115.0"	""	"146.6"	"148.9"	""	"855"	"29"	"36.000"	"29.000"	"0.0588757047952162"	"26"	"0"	"0.000189"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DIQDGLLK"	"[K].dIQDGLLk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.0488"	"0.0000"	"1"	"1"	"1"	"680.41553"	"1359.82378"	"1359.82479"	"-0.74"	"-0.00050"	"7/72"	"7"	"72"	"334262.900085449"	"HCD"	"MS2"	"33.24237"	"30.3"	"100.000"	"85.8720"	"29896"	"29896"	"29871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"38.8"	""	"39.4"	""	"48.7"	"3.3"	"62.7"	"58.7"	""	"690"	"41"	"35.000"	"28.000"	"0.00302565283294554"	""	"0.001488"	"0.01225"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQALEKTK"	"[R].aLEQALEKTK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"1"	"2"	"2"	"0.1224"	"0.0000"	"1"	"1"	"1"	"680.41565"	"1359.82402"	"1359.80450"	"14.36"	"0.00976"	"7/96"	"7"	"96"	"1846363.92980957"	"HCD"	"MS2"	"5.218129"	"142.5"	"100.000"	"76.4249"	"26077"	"26077"	"26058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.0"	""	"154.2"	""	"164.0"	""	"266.8"	""	"281.3"	"295.0"	""	"689"	"49"	"35.000"	"28.000"	"0.000393721586335076"	""	"0.005426"	"0.06917"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIQDGLLK"	"[K].dIQDGLLk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"680.41577"	"1359.82427"	"1359.82479"	"-0.38"	"-0.00026"	"6/72"	"6"	"72"	"796261.99798584"	"HCD"	"MS2"	"60.04736"	"59.0"	"100.000"	"79.9008"	"27481"	"27481"	"27461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.3"	""	"77.0"	""	"77.0"	""	"90.9"	""	"120.3"	"116.5"	""	"705"	"23"	"35.000"	"28.000"	"0.167941922848909"	"27"	"0.007872"	"0.1002"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LELEAAQK"	"[R].lELEAAQk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"680.41656"	"1359.82585"	"1359.82479"	"0.78"	"0.00053"	"7/62"	"7"	"62"	"417482.94934082"	"HCD"	"MS2"	"23.21498"	"37.0"	"100.000"	"70.0059"	"23475"	"23475"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"42.3"	""	"44.5"	""	"65.8"	""	"82.0"	"83.3"	""	"695"	"40"	"35.000"	"28.000"	"0.00384551764932238"	""	"0"	"0.0001382"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLRK"	"[R].aDAEVLRk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"1"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"453.94977"	"1359.83475"	"1359.83602"	"-0.93"	"-0.00042"	"6/62"	"6"	"62"	"6104514.57043457"	"HCD"	"MS2"	"24.89466"	"358.7"	"100.000"	"41.8319"	"12035"	"12035"	"12017"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"839.1"	""	"621.2"	""	"680.2"	""	"370.8"	""	"406.6"	"461.8"	""	"669"	"15"	"35.000"	"28.000"	"0.962489769729081"	"14"	"0.00452"	"0.0527"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADAEVLRK"	"[R].aDAEVLRk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"1"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"453.94992"	"1359.83521"	"1359.83602"	"-0.60"	"-0.00027"	"6/62"	"6"	"62"	"6026797.52227783"	"HCD"	"MS2"	"32.95028"	"336.9"	"100.000"	"41.9450"	"12047"	"12047"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"797.4"	""	"562.8"	""	"614.0"	""	"353.8"	""	"401.8"	"441.1"	""	"668"	"9"	"35.000"	"28.000"	"4.04339776605861"	"17"	"0.00511"	"0.06549"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"680.87378"	"1360.74028"	"1360.74223"	"-1.43"	"-0.00097"	"6/84"	"6"	"84"	"360580.621582031"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"92.3584"	"32510"	"32510"	"32481"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"18.3"	""	"25.9"	""	"34.0"	"0.8"	"36.9"	"34.0"	""	"999"	"43"	"36.000"	"29.000"	"0.00279598921946807"	"24"	"0.0001991"	"0.003091"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"680.87402"	"1360.74077"	"1360.74223"	"-1.07"	"-0.00073"	"5/84"	"5"	"84"	"443564.198669434"	"HCD"	"MS2"	"28.69434"	"23.2"	"100.000"	"95.4016"	"33703"	"33703"	"33681"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"27.8"	""	"27.4"	""	"39.9"	""	"52.6"	"47.4"	""	"983"	"26"	"36.000"	"29.000"	"0.111307267718199"	"17"	"0.0005161"	"0.00688"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"680.87445"	"1360.74162"	"1360.74223"	"-0.45"	"-0.00030"	"6/84"	"6"	"84"	"266637.203430176"	"HCD"	"MS2"	"19.3166"	"16.2"	"100.000"	"92.3755"	"32481"	"32481"	"32457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"17.4"	""	"20.1"	""	"28.3"	""	"32.5"	"39.2"	""	"987"	"48"	"36.000"	"29.000"	"0.000845837931255408"	"25"	"0.006384"	"0.07964"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5111"	"0.0000"	"1"	"1"	"1"	"680.87457"	"1360.74187"	"1360.74223"	"-0.27"	"-0.00018"	"6/84"	"6"	"84"	"597910.739501953"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"95.6507"	"33837"	"33837"	"33820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"32.4"	""	"40.7"	""	"44.6"	"0.5"	"53.8"	"62.7"	""	"987"	"45"	"36.000"	"29.000"	"0.00166451286823152"	"27"	"0.0001686"	"0.001664"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4359"	"0.0000"	"1"	"1"	"1"	"680.87457"	"1360.74187"	"1360.74223"	"-0.27"	"-0.00018"	"7/84"	"7"	"84"	"559846.111328125"	"HCD"	"MS2"	"6.469284"	"25.5"	"100.000"	"96.0089"	"33949"	"33949"	"33929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.5"	""	"31.7"	""	"33.8"	"1.9"	"43.6"	""	"47.0"	"53.6"	""	"987"	"39"	"36.000"	"29.000"	"0.00564010458218752"	"26"	"0.0001686"	"0.001349"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"680.87463"	"1360.74199"	"1360.74223"	"-0.18"	"-0.00012"	"6/84"	"6"	"84"	"1137755.81036377"	"HCD"	"MS2"	"8.870524"	"43.2"	"100.000"	"92.6670"	"32635"	"32635"	"32620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"45.7"	""	"54.4"	""	"82.6"	""	"93.2"	"79.8"	""	"986"	"46"	"36.000"	"29.000"	"0.00130872054205394"	"28"	"9.9E-05"	"0.00062"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"680.87469"	"1360.74211"	"1360.74223"	"-0.09"	"-0.00006"	"6/84"	"6"	"84"	"982450.56842041"	"HCD"	"MS2"	"6.903793"	"39.5"	"100.000"	"92.6682"	"32600"	"32600"	"32583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.3"	""	"47.4"	""	"51.6"	""	"70.8"	"0.1"	"81.2"	"77.7"	""	"985"	"49"	"36.000"	"29.000"	"0.000618594757119726"	"27"	"9.9E-05"	"0.001007"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"680.87469"	"1360.74211"	"1360.74223"	"-0.09"	"-0.00006"	"6/84"	"6"	"84"	"1395937.64733887"	"HCD"	"MS2"	"12.70453"	"52.2"	"100.000"	"92.9755"	"32755"	"32755"	"32739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.1"	""	"53.4"	""	"59.6"	""	"92.3"	"0.3"	"123.6"	"97.5"	""	"985"	"46"	"36.000"	"29.000"	"0.0012805785848589"	"26"	"0"	"1.762E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"680.87482"	"1360.74236"	"1360.74223"	"0.09"	"0.00006"	"6/84"	"6"	"84"	"608591.064331055"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"95.9253"	"33948"	"33948"	"33933"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.3"	""	"31.9"	""	"34.9"	""	"51.8"	"1.3"	"57.1"	"48.6"	""	"994"	"45"	"36.000"	"29.000"	"0.00153587682995925"	"27"	"0"	"0.0001342"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"680.87482"	"1360.74236"	"1360.74223"	"0.09"	"0.00006"	"6/84"	"6"	"84"	"1398473.48345947"	"HCD"	"MS2"	"6.459742"	"52.2"	"100.000"	"92.9590"	"32713"	"32713"	"32696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.9"	""	"63.0"	""	"57.0"	""	"94.0"	"0.6"	"119.9"	"102.8"	""	"994"	"49"	"36.000"	"29.000"	"0.000607234431101941"	"27"	"0"	"4.768E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"680.87488"	"1360.74248"	"1360.74223"	"0.18"	"0.00012"	"10/84"	"10"	"84"	"701449.61138916"	"HCD"	"MS2"	"35.03838"	"36.4"	"100.000"	"93.2882"	"32881"	"32881"	"32862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.0"	""	"36.0"	""	"52.3"	""	"68.7"	"0.6"	"69.5"	"75.0"	""	"996"	"40"	"36.000"	"29.000"	"0.00483313963688254"	"26"	"9.9E-05"	"0.0009814"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4222"	"0.0000"	"1"	"1"	"1"	"680.87500"	"1360.74272"	"1360.74223"	"0.36"	"0.00025"	"6/84"	"6"	"84"	"684650.712890625"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"95.7084"	"33827"	"33827"	"33808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"33.4"	""	"46.6"	""	"54.0"	""	"64.8"	"50.7"	""	"995"	"45"	"36.000"	"29.000"	"0.00154807887771024"	"27"	"9.9E-05"	"0.0005881"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"680.87500"	"1360.74272"	"1360.74223"	"0.36"	"0.00025"	"10/84"	"10"	"84"	"879065.95526123"	"HCD"	"MS2"	"20.21173"	"37.5"	"100.000"	"93.2494"	"32830"	"32830"	"32813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"39.3"	""	"46.4"	""	"70.1"	""	"85.9"	"74.8"	""	"995"	"38"	"36.000"	"29.000"	"0.00829455488244154"	"25"	"0"	"9.1E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGQLNADLR"	"[R].fPGQLnADLR.[K]"	"N-Term(TMT6plex); N6(Deamidated)"	"2"	"5"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q4QRB4; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"680.87512"	"1360.74297"	"1360.74223"	"0.54"	"0.00037"	"10/84"	"10"	"84"	"302606.757629395"	"HCD"	"MS2"	"14.68509"	"18.3"	"100.000"	"96.2529"	"34080"	"34080"	"34057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"23.5"	""	"25.6"	""	"33.7"	""	"40.3"	"32.0"	""	"968"	"25"	"36.000"	"29.000"	"0.160267462797574"	"26"	"0.001348"	"0.01122"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFELGGDK"	"[K].hFELGGDk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"454.25772"	"1360.75861"	"1360.76252"	"-2.87"	"-0.00130"	"6/64"	"6"	"64"	"2554898.82519531"	"HCD"	"MS2"	"42.22918"	"121.4"	"100.000"	"47.1307"	"14190"	"14190"	"14161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.6"	""	"194.7"	""	"177.8"	""	"200.7"	""	"202.1"	"180.6"	""	"996"	"27"	"36.000"	"29.000"	"0.0966561167041204"	"23"	"0.0001991"	"0.005616"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFELGGDK"	"[K].hFELGGDk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"454.25851"	"1360.76099"	"1360.76252"	"-1.13"	"-0.00051"	"6/64"	"6"	"64"	"3552631.2923584"	"HCD"	"MS2"	"17.09307"	"155.0"	"100.000"	"47.5196"	"14310"	"14310"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.1"	""	"270.2"	""	"236.2"	""	"268.9"	""	"231.4"	"212.9"	""	"968"	"29"	"36.000"	"29.000"	"0.0638036261461301"	"23"	"0.0005778"	"0.007092"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFELGGDK"	"[K].hFELGGDk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"P83883"	"60S ribosomal protein L36a OS=Rattus norvegicus OX=10116 GN=Rpl36a PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"454.25894"	"1360.76227"	"1360.76252"	"-0.18"	"-0.00008"	"6/64"	"6"	"64"	"2804220.70843506"	"HCD"	"MS2"	"10.69309"	"123.9"	"100.000"	"47.4229"	"14308"	"14308"	"14287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.7"	""	"187.9"	""	"208.8"	""	"202.8"	""	"199.5"	"170.5"	""	"1027"	"30"	"37.000"	"30.000"	"0.0531545502589843"	"19"	"0.0001991"	"0.003316"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEALPEK"	"[K].eSEALPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"680.88989"	"1360.77251"	"1360.77242"	"0.07"	"0.00005"	"6/68"	"6"	"68"	"555068.712036133"	"HCD"	"MS2"	"18.24042"	"48.2"	"100.000"	"45.8736"	"13683"	"13683"	"13653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.5"	""	"45.2"	""	"50.7"	""	"90.8"	""	"116.9"	"104.3"	""	"986"	"27"	"36.000"	"29.000"	"0.101823241681459"	"26"	"0.0001991"	"0.004989"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"680.89307"	"1360.77886"	"1360.77862"	"0.18"	"0.00012"	"7/108"	"7"	"108"	"348586.036560059"	"HCD"	"MS2"	"40.81931"	"13.0"	"100.000"	"91.5731"	"32155"	"32155"	"32132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"18.7"	""	"14.3"	""	"24.7"	""	"24.3"	"25.2"	""	"971"	"47"	"36.000"	"29.000"	"0.00100274206564601"	"22"	"0.0009352"	"0.008047"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"680.89313"	"1360.77898"	"1360.77862"	"0.27"	"0.00018"	"8/108"	"8"	"108"	"633827.538391113"	"HCD"	"MS2"	"28.72654"	"18.9"	"100.000"	"91.1868"	"32035"	"32035"	"32019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"17.2"	""	"27.8"	""	"25.8"	""	"36.2"	"47.1"	""	"984"	"48"	"36.000"	"29.000"	"0.000801613648058743"	"24"	"9.9E-05"	"0.0006528"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"680.89355"	"1360.77983"	"1360.77862"	"0.89"	"0.00061"	"7/108"	"7"	"108"	"322634.387817383"	"HCD"	"MS2"	"38.85574"	"12.9"	"100.000"	"91.5031"	"32163"	"32163"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.0"	""	"14.2"	""	"14.6"	""	"20.7"	""	"23.1"	"33.1"	""	"931"	"39"	"36.000"	"29.000"	"0.00560944230243072"	"22"	"0.000264"	"0.006106"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"680.89368"	"1360.78008"	"1360.77862"	"1.07"	"0.00073"	"8/108"	"8"	"108"	"593132.182312012"	"HCD"	"MS2"	"21.91941"	"20.3"	"100.000"	"91.2664"	"32030"	"32030"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"21.9"	""	"29.8"	""	"30.9"	"1.7"	"38.9"	"44.3"	""	"949"	"45"	"36.000"	"29.000"	"0.00151787572954857"	"23"	"0.001951"	"0.01646"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"680.89435"	"1360.78142"	"1360.77862"	"2.06"	"0.00140"	"6/108"	"6"	"108"	"191852.520629883"	"HCD"	"MS2"	"23.03462"	"10.8"	"100.000"	"91.8584"	"32307"	"32307"	"32280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"12.1"	""	"12.1"	""	"16.0"	""	"27.4"	"25.4"	""	"922"	"24"	"36.000"	"29.000"	"0.179349811842363"	"15"	"0.004852"	"0.05978"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"680.89478"	"1360.78227"	"1360.77862"	"2.69"	"0.00183"	"8/108"	"8"	"108"	"1206028.24841309"	"HCD"	"MS2"	"46.25365"	"63.4"	"100.000"	"90.8865"	"31914"	"31914"	"31900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.8"	""	"74.8"	""	"80.7"	""	"89.2"	""	"125.4"	"156.5"	""	"950"	"30"	"36.000"	"29.000"	"0.0457818786221386"	"21"	"0.0005161"	"0.006831"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQGPPPAGLLQ"	"[K].gPQGPPPAGLLQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"P06341"	"Rano class II histocompatibility antigen, A beta chain (Fragment) OS=Rattus norvegicus OX=10116 GN=RT1-B PE=3 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"680.89551"	"1360.78374"	"1360.77862"	"3.76"	"0.00256"	"6/108"	"6"	"108"	"1388045.65820313"	"HCD"	"MS2"	"47.25543"	"73.0"	"100.000"	"90.9475"	"31901"	"31901"	"31883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.1"	""	"83.7"	""	"86.9"	""	"111.7"	""	"151.6"	"181.7"	""	"979"	"25"	"36.000"	"29.000"	"0.145463052253576"	"21"	"0.008926"	"0.1153"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"680.90619"	"1360.80510"	"1360.80880"	"-2.72"	"-0.00185"	"12/64"	"12"	"64"	"2942586.63592529"	"HCD"	"MS2"	"18.73892"	"220.1"	"100.000"	"64.0534"	"21058"	"21058"	"21047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.3"	""	"242.1"	""	"242.3"	""	"531.3"	""	"458.0"	"400.0"	""	"889"	"32"	"36.000"	"29.000"	"0.026355530677581"	""	"0.0001991"	"0.002866"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLDVEK"	"[K].eGLLDVEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.2963"	"0.0000"	"1"	"1"	"1"	"680.90625"	"1360.80522"	"1360.80880"	"-2.63"	"-0.00179"	"12/68"	"12"	"68"	"450001.51373291"	"HCD"	"MS2"	"9.233274"	"40.9"	"100.000"	"85.9280"	"29889"	"29889"	"29870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.4"	""	"45.7"	""	"49.3"	""	"70.7"	""	"89.5"	"93.2"	""	"889"	"27"	"36.000"	"29.000"	"0.0983720598419706"	""	"0.0001991"	"0.003987"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLLDVEK"	"[K].eGLLDVEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"680.90631"	"1360.80535"	"1360.80880"	"-2.54"	"-0.00173"	"7/68"	"7"	"68"	"471049.245544434"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"85.9112"	"29912"	"29912"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"46.9"	""	"51.1"	""	"68.0"	""	"98.9"	"100.2"	""	"889"	"33"	"36.000"	"29.000"	"0.0218208550949832"	""	"0.0001991"	"0.002218"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"680.90662"	"1360.80596"	"1360.80880"	"-2.09"	"-0.00142"	"7/64"	"7"	"64"	"1932050.99780273"	"HCD"	"MS2"	"0"	"156.5"	"100.000"	"64.1029"	"21046"	"21046"	"21029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.6"	""	"176.7"	""	"175.7"	""	"383.3"	""	"345.7"	"275.7"	""	"841"	"24"	"36.000"	"29.000"	"0.157676147444226"	"24"	"0.0009352"	"0.008044"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"680.90698"	"1360.80669"	"1360.80880"	"-1.55"	"-0.00106"	"12/64"	"12"	"64"	"3659732.85577393"	"HCD"	"MS2"	"0"	"275.2"	"100.000"	"63.7958"	"20922"	"20922"	"20908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.6"	""	"326.0"	""	"282.4"	""	"685.9"	""	"561.2"	"456.5"	""	"839"	"32"	"36.000"	"29.000"	"0.0249305560539233"	""	"0.0001991"	"0.00534"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEVEVLK"	"[R].eGEVEVLk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"3"	"680.90729"	"1360.80730"	"1360.80880"	"-1.11"	"-0.00075"	"7/64"	"7"	"64"	"3657115.16711426"	"HCD"	"MS2"	"0"	"279.6"	"100.000"	"63.7808"	"20948"	"20948"	"20937"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"281.6"	""	"310.6"	""	"302.7"	""	"659.9"	""	"613.5"	"506.1"	""	"834"	"17"	"36.000"	"29.000"	"0.76583648917626"	"24"	"0.002525"	"0.02396"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQAAADLK"	"[K].vSQAAADLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"680.91272"	"1360.81816"	"1360.82004"	"-1.38"	"-0.00094"	"8/86"	"8"	"86"	"3300894.51977539"	"HCD"	"MS2"	"0"	"237.7"	"100.000"	"56.9043"	"18155"	"18155"	"18137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.4"	""	"289.7"	""	"271.1"	""	"408.4"	"0.5"	"516.3"	"511.9"	""	"734"	"55"	"35.000"	"28.000"	"0.000105357647360306"	""	"0"	"0.0001497"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQAAADLK"	"[K].vSQAAADLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.4746"	"0.0000"	"1"	"1"	"1"	"680.91278"	"1360.81828"	"1360.82004"	"-1.29"	"-0.00088"	"8/86"	"8"	"86"	"1634262.37054443"	"HCD"	"MS2"	"24.65024"	"121.7"	"100.000"	"56.9330"	"18132"	"18132"	"18110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.4"	""	"132.2"	""	"136.4"	""	"231.2"	""	"266.3"	"263.0"	""	"728"	"59"	"35.000"	"28.000"	"5.12981122625562E-05"	""	"0"	"6.124E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQAAADLK"	"[K].vSQAAADLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"680.91278"	"1360.81828"	"1360.82004"	"-1.29"	"-0.00088"	"8/86"	"8"	"86"	"3563250.96075439"	"HCD"	"MS2"	"0"	"258.0"	"100.000"	"57.2312"	"18253"	"18253"	"18238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"273.0"	""	"320.8"	""	"291.1"	""	"472.5"	""	"535.9"	"562.8"	""	"728"	"60"	"35.000"	"28.000"	"4.05603210227389E-05"	""	"0"	"0.0001334"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQAAADLK"	"[K].vSQAAADLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"680.91309"	"1360.81890"	"1360.82004"	"-0.84"	"-0.00057"	"8/86"	"8"	"86"	"1309539.45910645"	"HCD"	"MS2"	"4.674539"	"106.4"	"100.000"	"57.5392"	"18378"	"18378"	"18362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.1"	""	"128.0"	""	"118.3"	""	"180.1"	""	"234.8"	"240.3"	""	"728"	"57"	"35.000"	"28.000"	"7.78218200578812E-05"	""	"0"	"6.754E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQAAADLK"	"[K].vSQAAADLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"P63219"	"Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 OS=Rattus norvegicus OX=10116 GN=Gng5 PE=3 SV=1"	"0"	"2"	"2"	"0.6271"	"0.0000"	"1"	"1"	"1"	"680.91412"	"1360.82097"	"1360.82004"	"0.69"	"0.00047"	"8/86"	"8"	"86"	"1724428.04528809"	"HCD"	"MS2"	"1.457698"	"130.2"	"100.000"	"57.2102"	"18280"	"18280"	"18263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.7"	""	"160.7"	""	"148.4"	""	"222.8"	"3.1"	"280.2"	"291.5"	""	"729"	"59"	"35.000"	"28.000"	"4.21402912279021E-05"	""	"0"	"4.595E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLYSDQMR"	"[K].fGLYSDQmR.[E]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.33807"	"1361.66887"	"1361.67210"	"-2.37"	"-0.00162"	"6/70"	"6"	"70"	"1015900.81610107"	"HCD"	"MS2"	"14.53269"	"62.2"	"100.000"	"62.7541"	"20531"	"20531"	"20510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.0"	""	"73.9"	""	"71.5"	""	"118.4"	"0.3"	"133.8"	"122.1"	""	"458"	"30"	"33.000"	"26.000"	"0.0231118910911561"	"14"	"0.0001991"	"0.005347"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLYSDQMR"	"[K].fGLYSDQmR.[E]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.33936"	"1361.67143"	"1361.67210"	"-0.49"	"-0.00033"	"7/70"	"7"	"70"	"1615539.94067383"	"HCD"	"MS2"	"4.360837"	"91.9"	"100.000"	"63.0444"	"20648"	"20648"	"20636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.9"	""	"116.3"	""	"107.5"	""	"165.0"	"1.3"	"181.4"	"184.2"	""	"492"	"40"	"33.000"	"26.000"	"0.00238745451942391"	"15"	"0.0005161"	"0.00666"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLYSDQMR"	"[K].fGLYSDQmR.[E]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.33942"	"1361.67156"	"1361.67210"	"-0.40"	"-0.00027"	"6/70"	"6"	"70"	"758497.84564209"	"HCD"	"MS2"	"26.05294"	"51.2"	"100.000"	"62.7789"	"20508"	"20508"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.7"	""	"62.3"	""	"53.5"	""	"96.2"	"1.6"	"119.8"	"99.8"	""	"493"	"28"	"33.000"	"26.000"	"0.0349797679096362"	"15"	"0.001348"	"0.01088"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGLYSDQMR"	"[K].fGLYSDQmR.[E]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"681.33942"	"1361.67156"	"1361.67210"	"-0.40"	"-0.00027"	"7/70"	"7"	"70"	"1618201.17272949"	"HCD"	"MS2"	"0"	"86.3"	"100.000"	"63.0712"	"20627"	"20627"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.4"	""	"110.6"	""	"88.3"	""	"160.5"	""	"183.0"	"183.8"	""	"493"	"32"	"33.000"	"26.000"	"0.0162112656908111"	"16"	"0.001348"	"0.01136"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"681.34741"	"1361.68755"	"1361.68986"	"-1.70"	"-0.00116"	"8/84"	"8"	"84"	"600181.637451172"	"HCD"	"MS2"	"16.15976"	"42.6"	"100.000"	"50.7658"	"15632"	"15632"	"15606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"51.7"	""	"61.1"	""	"67.7"	""	"79.0"	"84.6"	""	"660"	"34"	"35.000"	"28.000"	"0.0124598823005387"	"15"	"0"	"4.023E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34760"	"1361.68791"	"1361.68986"	"-1.43"	"-0.00097"	"5/84"	"5"	"84"	"520993.584899902"	"HCD"	"MS2"	"34.82748"	"45.7"	"100.000"	"47.7035"	"14385"	"14385"	"14361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"59.8"	""	"55.5"	""	"80.5"	"0.0"	"87.4"	"88.2"	""	"664"	"6"	"35.000"	"28.000"	"8.9978362178776"	"13"	"0.007259"	"0.09211"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"454.56754"	"1361.68805"	"1361.68986"	"-1.33"	"-0.00060"	"10/84"	"10"	"84"	"3165785.89367676"	"HCD"	"MS2"	"25.29122"	"89.3"	"100.000"	"48.0346"	"14558"	"14558"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.1"	""	"133.7"	""	"131.1"	""	"135.1"	""	"153.1"	"156.9"	""	"664"	"26"	"35.000"	"28.000"	"0.077114861639056"	"16"	"0.0001991"	"0.002947"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"454.56769"	"1361.68851"	"1361.68986"	"-0.99"	"-0.00045"	"10/84"	"10"	"84"	"4460417.96691895"	"HCD"	"MS2"	"41.36113"	"142.4"	"100.000"	"48.3685"	"14656"	"14656"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.3"	""	"193.8"	""	"204.1"	""	"232.1"	""	"246.4"	"260.9"	""	"670"	"29"	"35.000"	"28.000"	"0.0381983678832991"	"15"	"0.0001991"	"0.002415"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"681.34790"	"1361.68852"	"1361.68986"	"-0.98"	"-0.00067"	"8/84"	"8"	"84"	"644219.544006348"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"50.2150"	"15442"	"15442"	"15419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.1"	""	"62.7"	""	"70.4"	""	"73.8"	""	"92.8"	"101.5"	""	"670"	"30"	"35.000"	"28.000"	"0.0337322109065354"	"16"	"0"	"7.2E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"681.34790"	"1361.68852"	"1361.68986"	"-0.98"	"-0.00067"	"8/84"	"8"	"84"	"4249697.04663086"	"HCD"	"MS2"	"0"	"248.5"	"100.000"	"42.3543"	"12248"	"12248"	"12226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"317.4"	""	"348.0"	""	"333.1"	""	"380.8"	"4.5"	"462.2"	"510.9"	""	"670"	"54"	"35.000"	"28.000"	"0.000132447817722823"	"24"	"0"	"1.213E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"681.34802"	"1361.68877"	"1361.68986"	"-0.80"	"-0.00055"	"11/84"	"11"	"84"	"703692.160888672"	"HCD"	"MS2"	"40.27422"	"65.5"	"100.000"	"50.9278"	"15732"	"15732"	"15702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.6"	""	"75.6"	""	"95.6"	""	"117.0"	""	"129.2"	"126.2"	""	"683"	"15"	"35.000"	"28.000"	"0.978116776723097"	"16"	"0.0001991"	"0.004158"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34802"	"1361.68877"	"1361.68986"	"-0.80"	"-0.00055"	"8/84"	"8"	"84"	"7116782.12023926"	"HCD"	"MS2"	"0"	"323.8"	"96.845"	"48.5804"	"14778"	"14778"	"14766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"410.9"	""	"486.3"	""	"497.9"	""	"452.7"	""	"578.6"	"643.7"	""	"683"	"59"	"35.000"	"28.000"	"3.90292951330707E-05"	"24"	"0"	"5.168E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"681.34808"	"1361.68889"	"1361.68986"	"-0.71"	"-0.00049"	"6/84"	"6"	"84"	"460544.241027832"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"51.3384"	"15896"	"15896"	"15873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.2"	""	"58.4"	""	"62.6"	""	"63.1"	""	"84.3"	"76.6"	""	"683"	"22"	"35.000"	"28.000"	"0.202018298070924"	"21"	"0.002328"	"0.02212"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34814"	"1361.68901"	"1361.68986"	"-0.62"	"-0.00042"	"8/84"	"8"	"84"	"5028002.36865234"	"HCD"	"MS2"	"0"	"256.0"	"100.000"	"48.9475"	"14891"	"14891"	"14879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.2"	""	"376.3"	""	"370.3"	""	"367.1"	""	"459.5"	"525.2"	""	"679"	"59"	"35.000"	"28.000"	"3.93404912414665E-05"	"24"	"0"	"7.267E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"681.34827"	"1361.68926"	"1361.68986"	"-0.44"	"-0.00030"	"7/84"	"7"	"84"	"522722.581604004"	"HCD"	"MS2"	"28.53695"	"41.3"	"100.000"	"50.5529"	"15580"	"15580"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"61.8"	""	"60.3"	""	"50.8"	""	"86.0"	"85.0"	""	"679"	"38"	"35.000"	"28.000"	"0.00491858044278446"	"22"	"0"	"2.816E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"681.34827"	"1361.68926"	"1361.68986"	"-0.44"	"-0.00030"	"8/84"	"8"	"84"	"601702.703979492"	"HCD"	"MS2"	"37.72306"	"45.2"	"100.000"	"47.3630"	"14284"	"14284"	"14263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.0"	""	"61.4"	""	"60.9"	""	"63.8"	""	"85.4"	"88.2"	""	"679"	"43"	"35.000"	"28.000"	"0.00181902965225779"	"21"	"0"	"6.815E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34839"	"1361.68950"	"1361.68986"	"-0.26"	"-0.00018"	"6/84"	"6"	"84"	"678168.747680664"	"HCD"	"MS2"	"9.723792"	"46.7"	"100.000"	"47.7035"	"14423"	"14423"	"14394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.8"	""	"66.9"	""	"64.4"	""	"63.3"	"1.2"	"88.0"	"91.6"	""	"680"	"8"	"35.000"	"28.000"	"5.65560301125857"	"13"	"0.009674"	"0.1285"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"681.34839"	"1361.68950"	"1361.68986"	"-0.26"	"-0.00018"	"8/84"	"8"	"84"	"1624304.32775879"	"HCD"	"MS2"	"42.08555"	"107.2"	"100.000"	"49.3752"	"15099"	"15099"	"15079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.8"	""	"153.7"	""	"171.2"	""	"135.5"	"3.2"	"205.9"	"213.1"	""	"680"	"40"	"35.000"	"28.000"	"0.00348721654925478"	"23"	"0"	"1.27E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"681.34839"	"1361.68950"	"1361.68986"	"-0.26"	"-0.00018"	"8/84"	"8"	"84"	"3986112.69055176"	"HCD"	"MS2"	"2.778669"	"234.4"	"100.000"	"42.5040"	"12275"	"12275"	"12254"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.3"	""	"303.9"	""	"321.1"	""	"347.9"	"2.7"	"443.4"	"478.4"	""	"680"	"56"	"35.000"	"28.000"	"8.90182222794455E-05"	"20"	"0"	"5.529E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34851"	"1361.68974"	"1361.68986"	"-0.09"	"-0.00006"	"7/84"	"7"	"84"	"529039.492370605"	"HCD"	"MS2"	"19.04207"	"44.1"	"100.000"	"51.0671"	"15755"	"15755"	"15732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"56.2"	""	"58.7"	""	"82.9"	""	"83.6"	"83.9"	""	"680"	"26"	"35.000"	"28.000"	"0.0844265255800494"	"14"	"0.0001991"	"0.004651"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"681.34851"	"1361.68974"	"1361.68986"	"-0.09"	"-0.00006"	"8/84"	"8"	"84"	"703191.68560791"	"HCD"	"MS2"	"0"	"56.3"	"100.000"	"42.6696"	"12377"	"12377"	"12351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.5"	""	"61.5"	""	"72.1"	""	"99.2"	"0.2"	"115.0"	"108.4"	""	"680"	"53"	"35.000"	"28.000"	"0.0001715848411716"	"18"	"0"	"1.643E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"681.34851"	"1361.68974"	"1361.68986"	"-0.09"	"-0.00006"	"8/84"	"8"	"84"	"805335.99609375"	"HCD"	"MS2"	"0"	"62.9"	"100.000"	"42.8030"	"12397"	"12397"	"12378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.6"	""	"72.8"	""	"82.8"	""	"104.5"	"0.9"	"117.3"	"133.4"	""	"680"	"50"	"35.000"	"28.000"	"0.000337659456463117"	"17"	"0"	"9.773E-06"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"681.34851"	"1361.68974"	"1361.68986"	"-0.09"	"-0.00006"	"8/84"	"8"	"84"	"1981060.20477295"	"HCD"	"MS2"	"47.75676"	"139.1"	"100.000"	"49.6639"	"15182"	"15182"	"15164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.3"	""	"202.7"	""	"224.7"	""	"177.0"	"1.1"	"262.0"	"270.4"	""	"680"	"37"	"35.000"	"28.000"	"0.00754186782732074"	"23"	"0"	"2.147E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34882"	"1361.69036"	"1361.68986"	"0.36"	"0.00025"	"7/84"	"7"	"84"	"1379450.31835938"	"HCD"	"MS2"	"44.56931"	"87.4"	"100.000"	"49.9109"	"15318"	"15318"	"15292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.9"	""	"106.0"	""	"175.0"	""	"117.0"	"0.8"	"160.2"	"152.4"	""	"700"	"23"	"35.000"	"28.000"	"0.188828717880295"	"14"	"9.9E-05"	"0.0004211"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"681.34888"	"1361.69048"	"1361.68986"	"0.45"	"0.00031"	"7/84"	"7"	"84"	"543875.66973877"	"HCD"	"MS2"	"47.81135"	"52.9"	"100.000"	"51.5271"	"15939"	"15939"	"15917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.8"	""	"62.7"	""	"76.7"	""	"89.0"	"1.6"	"99.1"	"99.1"	""	"700"	"12"	"35.000"	"28.000"	"2.28595693426615"	"20"	"0.0001991"	"0.004872"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34894"	"1361.69060"	"1361.68986"	"0.54"	"0.00037"	"7/84"	"7"	"84"	"1118804.40026855"	"HCD"	"MS2"	"38.29266"	"70.7"	"100.000"	"50.3079"	"15445"	"15445"	"15414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.2"	""	"98.1"	""	"130.4"	""	"99.0"	""	"131.5"	"122.0"	""	"696"	"26"	"35.000"	"28.000"	"0.0949684268417197"	"14"	"0"	"0.0001095"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"681.34906"	"1361.69084"	"1361.68986"	"0.72"	"0.00049"	"8/84"	"8"	"84"	"1826117.58905029"	"HCD"	"MS2"	"25.13538"	"109.3"	"100.000"	"49.9858"	"15313"	"15313"	"15292"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.6"	""	"144.4"	""	"200.9"	""	"148.1"	"1.7"	"205.3"	"185.2"	""	"697"	"19"	"35.000"	"28.000"	"0.411341741524628"	"16"	"0.0001686"	"0.001336"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"681.34924"	"1361.69121"	"1361.68986"	"0.99"	"0.00067"	"8/84"	"8"	"84"	"130455242.583008"	"HCD"	"MS2"	"0"	"342.8"	"5.718"	"48.2841"	"14658"	"14658"	"14655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"442.8"	""	"484.7"	""	"531.5"	""	"464.6"	""	"613.3"	"717.8"	""	"705"	"59"	"35.000"	"28.000"	"3.97337103301868E-05"	"24"	"0"	"0.0001275"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"681.34937"	"1361.69145"	"1361.68986"	"1.17"	"0.00080"	"8/84"	"8"	"84"	"366238592.132813"	"HCD"	"MS2"	"0.02797839"	"429.5"	"2.446"	"48.3480"	"14648"	"14648"	"14636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"559.4"	""	"639.0"	""	"637.6"	""	"621.6"	"1.7"	"749.3"	"860.7"	""	"700"	"57"	"35.000"	"28.000"	"6.45755396712815E-05"	"23"	"0"	"0.0003286"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34955"	"1361.69182"	"1361.68986"	"1.44"	"0.00098"	"8/84"	"8"	"84"	"63944641.8388672"	"HCD"	"MS2"	"0"	"349.9"	"11.330"	"48.6533"	"14772"	"14772"	"14756"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"452.5"	""	"502.8"	""	"525.4"	""	"479.4"	""	"629.3"	"729.7"	""	"699"	"59"	"35.000"	"28.000"	"4.05926290537199E-05"	"24"	"0"	"0.000181"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAER"	"[R].gYSFTTTAER.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"681.34985"	"1361.69243"	"1361.68986"	"1.89"	"0.00128"	"8/84"	"8"	"84"	"289059886.873047"	"HCD"	"MS2"	"0"	"549.5"	"4.222"	"48.0050"	"14546"	"14546"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"722.3"	""	"823.0"	""	"800.3"	""	"805.2"	"10.3"	"961.4"	"1083.4"	""	"696"	"59"	"35.000"	"28.000"	"4.0232706028285E-05"	"24"	"0"	"7.547E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYELFEFR"	"[K].eYELFEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.34991"	"1361.69255"	"1361.69388"	"-0.98"	"-0.00067"	"5/66"	"5"	"66"	"267166.983947754"	"HCD"	"MS2"	"26.10963"	"17.6"	"100.000"	"110.1288"	"39572"	"39572"	"39553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"23.5"	""	"35.2"	""	"27.3"	""	"27.4"	"31.4"	""	"701"	"27"	"35.000"	"28.000"	"0.0782867064102101"	"14"	"0.001348"	"0.01052"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYELFEFR"	"[K].eYELFEFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"O08700"	"Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.35046"	"1361.69365"	"1361.69388"	"-0.17"	"-0.00012"	"6/66"	"6"	"66"	"206237.744567871"	"HCD"	"MS2"	"15.72139"	"14.5"	"100.000"	"109.9671"	"39494"	"39494"	"39481"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"17.4"	""	"28.9"	""	"20.0"	""	"23.4"	"30.5"	""	"709"	"16"	"35.000"	"28.000"	"0.804667089992814"	"14"	"0.001615"	"0.01473"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"681.35754"	"1361.70781"	"1361.70849"	"-0.50"	"-0.00034"	"6/88"	"6"	"88"	"1597547.38342285"	"HCD"	"MS2"	"2.710641"	"63.3"	"100.000"	"85.1238"	"29564"	"29564"	"29543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.7"	""	"81.6"	""	"84.2"	""	"73.7"	"0.1"	"125.8"	"134.9"	""	"816"	"48"	"36.000"	"29.000"	"0.000593827304877443"	"21"	"9.9E-05"	"0.000586"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"681.35773"	"1361.70818"	"1361.70849"	"-0.23"	"-0.00016"	"6/88"	"6"	"88"	"344923.102905273"	"HCD"	"MS2"	"24.50497"	"23.1"	"100.000"	"84.8261"	"29444"	"29444"	"29427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.5"	""	"23.5"	""	"32.0"	""	"28.5"	""	"48.1"	"50.3"	""	"803"	"41"	"36.000"	"29.000"	"0.00293552342018592"	"20"	"0"	"0.0003951"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"681.35779"	"1361.70830"	"1361.70849"	"-0.14"	"-0.00009"	"6/88"	"6"	"88"	"913024.878723145"	"HCD"	"MS2"	"31.46372"	"58.6"	"100.000"	"85.4274"	"29717"	"29717"	"29699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.4"	""	"88.4"	""	"97.4"	""	"70.4"	""	"114.8"	"96.0"	""	"803"	"47"	"36.000"	"29.000"	"0.000737370144854361"	"24"	"9.9E-05"	"0.0005199"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"681.35791"	"1361.70854"	"1361.70849"	"0.04"	"0.00003"	"6/88"	"6"	"88"	"1562793.98974609"	"HCD"	"MS2"	"1.660922"	"63.6"	"100.000"	"85.1234"	"29593"	"29593"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.1"	""	"72.6"	""	"89.1"	""	"80.4"	""	"119.7"	"138.0"	""	"803"	"41"	"36.000"	"29.000"	"0.00338598905242356"	"21"	"0.0001991"	"0.002717"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"681.35803"	"1361.70879"	"1361.70849"	"0.22"	"0.00015"	"6/88"	"6"	"88"	"832177.62487793"	"HCD"	"MS2"	"30.16088"	"57.0"	"100.000"	"85.4420"	"29693"	"29693"	"29676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.8"	""	"88.8"	""	"92.3"	""	"75.7"	""	"102.3"	"93.4"	""	"810"	"44"	"36.000"	"29.000"	"0.00164230956856595"	"26"	"9.9E-05"	"0.000657"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLMHEk.[I]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"681.35815"	"1361.70903"	"1361.70849"	"0.40"	"0.00027"	"6/88"	"6"	"88"	"358360.395324707"	"HCD"	"MS2"	"21.81963"	"22.7"	"100.000"	"84.8416"	"29479"	"29479"	"29465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.8"	""	"30.7"	""	"30.2"	""	"29.8"	"0.3"	"40.2"	"49.4"	""	"834"	"44"	"36.000"	"29.000"	"0.00153509782008935"	"20"	"0"	"0.0002985"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTQSPSTSVR"	"[R].lGTQSPSTSVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P42335"	"Inositol-trisphosphate 3-kinase B OS=Rattus norvegicus OX=10116 GN=Itpkb PE=1 SV=3"	"P42335"	"Inositol-trisphosphate 3-kinase B OS=Rattus norvegicus OX=10116 GN=Itpkb PE=1 SV=3"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"681.38324"	"1361.75920"	"1361.75861"	"0.44"	"0.00030"	"14/106"	"14"	"106"	"420720.319885254"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"36.3076"	"9801"	"9801"	"9791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.3"	""	"35.1"	""	"43.5"	""	"62.8"	""	"79.5"	"67.4"	""	"944"	"12"	"36.000"	"29.000"	"2.98498393849576"	"21"	"0.002189"	"0.02081"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEEAAQK"	"[R].vEEEAAQk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"681.38336"	"1361.75945"	"1361.76767"	"-6.04"	"-0.00411"	"12/62"	"12"	"62"	"409955.326171875"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"36.5250"	"9851"	"9851"	"9837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"32.8"	""	"33.0"	""	"70.7"	""	"75.2"	"60.6"	""	"943"	"33"	"36.000"	"29.000"	"0.0214526870360748"	"28"	"0.0001686"	"0.001371"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANGNVEAK"	"[K].tANGNVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"681.39178"	"1361.77629"	"1361.77890"	"-1.91"	"-0.00130"	"12/88"	"12"	"88"	"241356.123840332"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"28.1069"	"6499"	"6499"	"6477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.0"	""	"22.3"	""	"28.3"	""	"35.1"	""	"40.0"	"43.4"	""	"833"	"23"	"36.000"	"29.000"	"0.201193991049565"	"17"	"0.002673"	"0.02806"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGNEGQLK"	"[R].gTGNEGQLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"681.39227"	"1361.77727"	"1361.77890"	"-1.20"	"-0.00082"	"7/80"	"7"	"80"	"443907.624267578"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"32.1486"	"8081"	"8081"	"8063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.6"	""	"50.7"	""	"66.0"	""	"68.0"	""	"62.9"	"82.6"	""	"925"	"23"	"36.000"	"29.000"	"0.211890622605472"	"21"	"0.001872"	"0.01572"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANGNVEAK"	"[K].tANGNVEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"Q62599"	"Metastasis-associated protein MTA1 OS=Rattus norvegicus OX=10116 GN=Mta1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"681.39264"	"1361.77800"	"1361.77890"	"-0.66"	"-0.00045"	"6/88"	"6"	"88"	"215397.887268066"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"28.4498"	"6594"	"6594"	"6565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"24.5"	""	"24.1"	""	"28.8"	""	"42.5"	"38.0"	""	"928"	"26"	"36.000"	"29.000"	"0.112854266021025"	"20"	"0.003529"	"0.0386"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGNEGQLK"	"[R].gTGNEGQLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"P06760"	"Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=2 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"681.39404"	"1361.78081"	"1361.77890"	"1.40"	"0.00095"	"8/80"	"8"	"80"	"382041.114501953"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"32.0061"	"8061"	"8061"	"8044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.4"	""	"38.3"	""	"46.9"	""	"57.1"	""	"71.3"	"65.4"	""	"886"	"42"	"36.000"	"29.000"	"0.00276314532118712"	""	"0"	"0.0001445"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMQTGIK"	"[R].ePMQTGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"681.39587"	"1361.78447"	"1361.78629"	"-1.34"	"-0.00091"	"7/72"	"7"	"72"	"6105519.80645752"	"HCD"	"MS2"	"52.07533"	"385.2"	"100.000"	"48.8648"	"14892"	"14892"	"14877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"557.1"	""	"597.8"	""	"559.0"	""	"417.7"	""	"734.0"	"789.5"	""	"880"	"30"	"36.000"	"29.000"	"0.0471468494304547"	"24"	"0.0005161"	"0.006829"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMQTGIK"	"[R].ePMQTGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"454.59988"	"1361.78510"	"1361.78629"	"-0.88"	"-0.00040"	"6/72"	"6"	"72"	"3427388.79187012"	"HCD"	"MS2"	"45.18166"	"146.1"	"100.000"	"49.1013"	"14988"	"14988"	"14972"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.7"	""	"214.8"	""	"212.9"	""	"158.0"	""	"271.3"	"314.3"	""	"875"	"35"	"36.000"	"29.000"	"0.0137713988741932"	"27"	"0.0001991"	"0.003549"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMQTGIK"	"[R].ePMQTGIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"681.39648"	"1361.78569"	"1361.78629"	"-0.44"	"-0.00030"	"7/72"	"7"	"72"	"5876615.8449707"	"HCD"	"MS2"	"48.83227"	"372.3"	"100.000"	"49.1767"	"14984"	"14984"	"14968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"534.3"	""	"582.0"	""	"520.5"	""	"416.1"	""	"726.9"	"756.2"	""	"877"	"27"	"36.000"	"29.000"	"0.0963761554216147"	"24"	"0.0001991"	"0.004916"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNVAGDSK"	"[R].rGNVAGDSk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"681.39844"	"1361.78960"	"1361.79013"	"-0.39"	"-0.00027"	"8/82"	"8"	"82"	"6100772.98590088"	"HCD"	"MS2"	"0"	"301.6"	"100.000"	"20.2943"	"3431"	"3431"	"3418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"519.1"	""	"380.6"	""	"451.0"	""	"462.1"	""	"537.4"	"506.9"	""	"922"	"19"	"36.000"	"29.000"	"0.560661746297976"	"23"	"0.001348"	"0.01102"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGNVAGDSK"	"[R].rGNVAGDSk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"681.39917"	"1361.79106"	"1361.79013"	"0.68"	"0.00047"	"8/82"	"8"	"82"	"5512512.0067749"	"HCD"	"MS2"	"0"	"270.7"	"100.000"	"20.3067"	"3396"	"3396"	"3379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"473.8"	""	"324.1"	""	"423.1"	""	"399.2"	""	"476.8"	"468.2"	""	"885"	"18"	"36.000"	"29.000"	"0.660561526238705"	"23"	"0.001615"	"0.01475"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINELGEK"	"[R].tINELGEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"681.40295"	"1361.79863"	"1361.80405"	"-3.98"	"-0.00271"	"7/78"	"7"	"78"	"1432001.76177979"	"HCD"	"MS2"	"8.554426"	"131.9"	"100.000"	"57.6634"	"18429"	"18429"	"18407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.3"	""	"147.1"	""	"167.2"	""	"221.9"	"0.3"	"269.7"	"270.2"	""	"811"	"41"	"36.000"	"29.000"	"0.002917365605805"	""	"9.9E-05"	"0.0008899"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINELGEK"	"[R].tINELGEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"681.40448"	"1361.80168"	"1361.80405"	"-1.74"	"-0.00118"	"7/78"	"7"	"78"	"1482546.15960693"	"HCD"	"MS2"	"4.623584"	"128.3"	"100.000"	"57.4422"	"18374"	"18374"	"18356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.5"	""	"155.1"	""	"149.6"	""	"221.6"	"0.4"	"260.5"	"255.4"	""	"818"	"42"	"36.000"	"29.000"	"0.00256875868754647"	""	"0.0001686"	"0.001464"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIENLAK"	"[R].eSIENLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"681.40472"	"1361.80217"	"1361.80405"	"-1.38"	"-0.00094"	"7/68"	"7"	"68"	"639135.105407715"	"HCD"	"MS2"	"12.91604"	"53.7"	"100.000"	"65.5231"	"21623"	"21623"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.8"	""	"59.8"	""	"67.4"	""	"91.1"	"1.3"	"109.6"	"113.8"	""	"816"	"30"	"36.000"	"29.000"	"0.039596806663616"	"25"	"0.0001686"	"0.001385"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"454.60580"	"1361.80286"	"1361.80405"	"-0.87"	"-0.00040"	"8/72"	"8"	"72"	"1735157.02874756"	"HCD"	"MS2"	"44.79794"	"98.5"	"100.000"	"46.9674"	"14123"	"14123"	"14100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.8"	""	"113.5"	""	"118.6"	""	"188.2"	""	"190.7"	"194.9"	""	"815"	"30"	"36.000"	"29.000"	"0.0369086034866017"	"24"	"0.002525"	"0.02379"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIENLAK"	"[R].eSIENLAk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"P08460"	"Nidogen-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nid1 PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"681.40509"	"1361.80290"	"1361.80405"	"-0.84"	"-0.00057"	"11/68"	"11"	"68"	"503591.992492676"	"HCD"	"MS2"	"23.41126"	"45.0"	"100.000"	"65.5358"	"21662"	"21662"	"21632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.6"	""	"50.1"	""	"49.9"	""	"82.8"	""	"90.1"	"98.5"	""	"815"	"29"	"36.000"	"29.000"	"0.0468951158494858"	"26"	"0.0001686"	"0.001846"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"681.40521"	"1361.80315"	"1361.80405"	"-0.66"	"-0.00045"	"14/72"	"14"	"72"	"2832915.7935791"	"HCD"	"MS2"	"0"	"216.7"	"100.000"	"46.9445"	"14114"	"14114"	"14100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"304.1"	""	"261.2"	""	"262.7"	""	"377.9"	""	"412.3"	"438.6"	""	"815"	"49"	"36.000"	"29.000"	"0.00046787260075998"	""	"9.9E-05"	"0.0005006"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"681.40533"	"1361.80339"	"1361.80405"	"-0.48"	"-0.00033"	"14/72"	"14"	"72"	"597385.77142334"	"HCD"	"MS2"	"0"	"49.0"	"100.000"	"46.6688"	"14002"	"14002"	"13977"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.8"	""	"69.3"	""	"54.8"	""	"91.1"	""	"93.4"	"80.6"	""	"843"	"47"	"36.000"	"29.000"	"0.000897010607881713"	"28"	"0"	"0.0001461"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"681.40533"	"1361.80339"	"1361.80405"	"-0.48"	"-0.00033"	"14/72"	"14"	"72"	"1640628.19335938"	"HCD"	"MS2"	"1.901859"	"127.0"	"100.000"	"47.3701"	"14249"	"14249"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.3"	""	"135.6"	""	"161.7"	""	"218.9"	""	"244.3"	"267.6"	""	"843"	"49"	"36.000"	"29.000"	"0.000531860305829967"	""	"9.9E-05"	"0.0006158"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGSDVALK"	"[R].vDGSDVALk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"681.40546"	"1361.80364"	"1361.80405"	"-0.30"	"-0.00021"	"8/70"	"8"	"70"	"1284658.61737061"	"HCD"	"MS2"	"18.16108"	"98.8"	"100.000"	"63.5285"	"20845"	"20845"	"20825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.4"	""	"120.9"	""	"118.2"	""	"177.4"	""	"205.2"	"190.2"	""	"843"	"54"	"36.000"	"29.000"	"0.000155882577777382"	"27"	"0"	"7.23E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDGSDVALK"	"[R].vDGSDVALk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"681.40564"	"1361.80400"	"1361.80405"	"-0.04"	"-0.00002"	"14/70"	"14"	"70"	"1367690.28936768"	"HCD"	"MS2"	"17.9616"	"109.2"	"100.000"	"63.5575"	"20825"	"20825"	"20805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.5"	""	"121.4"	""	"131.8"	""	"203.5"	""	"234.8"	"204.1"	""	"843"	"47"	"36.000"	"29.000"	"0.000939285415417432"	""	"0"	"6.062E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDQTIEK"	"[K].aVDQTIEk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"681.40570"	"1361.80412"	"1361.80405"	"0.05"	"0.00004"	"14/72"	"14"	"72"	"943678.041748047"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"47.0576"	"14122"	"14122"	"14100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.2"	""	"95.3"	""	"94.6"	""	"135.5"	"0.1"	"137.8"	"150.9"	""	"847"	"47"	"36.000"	"29.000"	"0.00089506260837082"	"27"	"9.9E-05"	"0.000456"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EQVSEAIK"	"[K].eQVSEAIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"681.40582"	"1361.80437"	"1361.80405"	"0.23"	"0.00016"	"7/76"	"7"	"76"	"624591.408813477"	"HCD"	"MS2"	"42.73315"	"51.9"	"100.000"	"47.2825"	"14252"	"14252"	"14225"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.9"	""	"59.5"	""	"73.8"	""	"85.6"	""	"103.4"	"102.7"	""	"851"	"14"	"36.000"	"29.000"	"1.57724647118486"	"25"	"0.00192"	"0.01622"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISSIEQK"	"[R].vISSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"4"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"681.42316"	"1361.83904"	"1361.84044"	"-1.03"	"-0.00070"	"14/64"	"14"	"64"	"1492337.96942139"	"HCD"	"MS2"	"15.55497"	"109.6"	"100.000"	"69.6879"	"23345"	"23345"	"23328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.4"	""	"143.8"	""	"145.7"	""	"183.5"	"2.4"	"206.1"	"202.1"	""	"637"	"49"	"35.000"	"28.000"	"0.000434619729003572"	""	"9.9E-05"	"0.0007066"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISSIEQK"	"[R].vISSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"4"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"454.61792"	"1361.83921"	"1361.84044"	"-0.90"	"-0.00041"	"8/64"	"8"	"64"	"528256.964355469"	"HCD"	"MS2"	"32.82965"	"29.8"	"100.000"	"69.7229"	"23326"	"23326"	"23298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.7"	""	"31.2"	""	"42.9"	""	"51.2"	""	"61.2"	"59.4"	""	"637"	"15"	"35.000"	"28.000"	"0.908049318199995"	"24"	"0.00307"	"0.03362"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISSIEQK"	"[R].vISSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"4"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"454.61807"	"1361.83966"	"1361.84044"	"-0.57"	"-0.00026"	"8/64"	"8"	"64"	"677750.427124023"	"HCD"	"MS2"	"16.1258"	"30.7"	"100.000"	"69.6416"	"23327"	"23327"	"23299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.3"	""	"40.0"	""	"43.2"	""	"49.4"	""	"58.0"	"64.9"	""	"637"	"24"	"35.000"	"28.000"	"0.141941515114605"	""	"0.00329"	"0.03566"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISSIEQK"	"[R].vISSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"4"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"681.42389"	"1361.84050"	"1361.84044"	"0.05"	"0.00003"	"14/64"	"14"	"64"	"1349955.24450684"	"HCD"	"MS2"	"18.98901"	"100.4"	"100.000"	"69.6376"	"23291"	"23291"	"23267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.6"	""	"119.2"	""	"139.1"	""	"154.1"	""	"190.3"	"200.9"	""	"646"	"49"	"35.000"	"28.000"	"0.000445864117466731"	""	"9.9E-05"	"0.0006685"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISSIEQK"	"[R].vISSIEQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"4"	"4"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P68511; P68255; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.2143"	"0.0000"	"1"	"1"	"1"	"454.61844"	"1361.84076"	"1361.84044"	"0.24"	"0.00011"	"7/64"	"7"	"64"	"576819.982849121"	"HCD"	"MS2"	"30.32764"	"27.6"	"100.000"	"69.4073"	"23198"	"23198"	"23168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.2"	""	"33.8"	""	"39.6"	""	"49.1"	""	"41.6"	"54.8"	""	"646"	"14"	"35.000"	"28.000"	"1.34648810860918"	"24"	"0.008718"	"0.1109"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"681.87872"	"1362.75017"	"1362.75168"	"-1.11"	"-0.00076"	"12/68"	"12"	"68"	"2066856.44122314"	"HCD"	"MS2"	"28.32444"	"155.1"	"100.000"	"42.9778"	"12469"	"12469"	"12441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.3"	""	"161.4"	""	"164.3"	""	"290.2"	""	"326.2"	"290.1"	""	"940"	"35"	"36.000"	"29.000"	"0.0135237725492577"	""	"0.0001686"	"0.001851"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"681.87903"	"1362.75078"	"1362.75168"	"-0.66"	"-0.00045"	"11/68"	"11"	"68"	"1488087.19537354"	"HCD"	"MS2"	"4.560463"	"126.3"	"100.000"	"43.3044"	"12602"	"12602"	"12578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"189.4"	""	"135.5"	""	"148.7"	""	"206.2"	""	"253.9"	"266.8"	""	"935"	"30"	"36.000"	"29.000"	"0.0453713409687267"	""	"0.0001991"	"0.002277"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"681.87927"	"1362.75127"	"1362.75168"	"-0.30"	"-0.00021"	"7/68"	"7"	"68"	"2363650.4420166"	"HCD"	"MS2"	"0"	"176.7"	"100.000"	"42.8190"	"12438"	"12438"	"12414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.2"	""	"169.4"	""	"193.9"	""	"329.9"	""	"371.5"	"352.1"	""	"948"	"29"	"36.000"	"29.000"	"0.0535523263554906"	"29"	"0.0001991"	"0.002668"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDPSTIEK"	"[R].dDPSTIEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"Q8CFN2"	"Cell division control protein 42 homolog OS=Rattus norvegicus OX=10116 GN=Cdc42 PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"681.87939"	"1362.75151"	"1362.75168"	"-0.12"	"-0.00008"	"7/68"	"7"	"68"	"1720707.71795654"	"HCD"	"MS2"	"0"	"144.3"	"100.000"	"43.1205"	"12561"	"12561"	"12539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.7"	"2.7"	"148.2"	""	"166.8"	""	"241.9"	""	"297.5"	"301.5"	""	"948"	"26"	"36.000"	"29.000"	"0.113443166853615"	"27"	"0.0001991"	"0.003494"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLMGNIDLSR"	"[R].vLmGNIDLSR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"681.88336"	"1362.75945"	"1362.76125"	"-1.32"	"-0.00090"	"13/86"	"13"	"86"	"555667.035766602"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"77.2921"	"26424"	"26424"	"26406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"33.6"	""	"27.8"	""	"67.9"	"0.5"	"75.3"	"72.2"	""	"915"	"11"	"36.000"	"29.000"	"3.502604476619"	"20"	"0.009411"	"0.1247"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.2083"	"0.0000"	"1"	"1"	"1"	"454.93350"	"1362.78595"	"1362.78807"	"-1.55"	"-0.00070"	"8/66"	"8"	"66"	"621330.166931152"	"HCD"	"MS2"	"12.80899"	"34.1"	"100.000"	"68.1256"	"22709"	"22709"	"22684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"46.2"	""	"43.9"	""	"55.4"	"0.3"	"65.9"	"63.0"	""	"971"	"24"	"36.000"	"29.000"	"0.190629116136506"	""	"0.0007633"	"0.007255"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"454.93390"	"1362.78714"	"1362.78807"	"-0.68"	"-0.00031"	"8/66"	"8"	"66"	"2774954.41101074"	"HCD"	"MS2"	"36.51747"	"102.8"	"100.000"	"67.5189"	"22431"	"22431"	"22418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.8"	""	"145.0"	""	"134.6"	""	"167.7"	""	"179.1"	"174.1"	""	"969"	"22"	"36.000"	"29.000"	"0.290598776445794"	""	"0.0009352"	"0.008206"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"454.93396"	"1362.78733"	"1362.78807"	"-0.54"	"-0.00025"	"6/66"	"6"	"66"	"2728980.11022949"	"HCD"	"MS2"	"17.17328"	"114.4"	"100.000"	"67.7929"	"22542"	"22542"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"207.0"	""	"139.9"	""	"152.1"	""	"168.9"	""	"205.5"	"210.2"	""	"994"	"32"	"36.000"	"29.000"	"0.0346223377513052"	""	"0.0001991"	"0.002926"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"454.93408"	"1362.78769"	"1362.78807"	"-0.27"	"-0.00012"	"6/66"	"6"	"66"	"3210856.65380859"	"HCD"	"MS2"	"17.71732"	"135.1"	"100.000"	"67.7756"	"22566"	"22566"	"22550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.5"	""	"163.9"	""	"181.4"	""	"204.7"	""	"238.6"	"253.2"	""	"992"	"38"	"36.000"	"29.000"	"0.00800721844185937"	""	"0.0005161"	"0.006525"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"681.89777"	"1362.78826"	"1362.78807"	"0.14"	"0.00009"	"7/66"	"7"	"66"	"2983215.17266846"	"HCD"	"MS2"	"0"	"230.3"	"100.000"	"68.0704"	"22686"	"22686"	"22668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"397.2"	""	"275.9"	"3.0"	"311.0"	""	"342.1"	"0.8"	"407.0"	"443.9"	""	"999"	"42"	"36.000"	"29.000"	"0.00301672340373502"	""	"0.0001686"	"0.001069"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.0625"	"0.0000"	"1"	"1"	"1"	"681.89783"	"1362.78838"	"1362.78807"	"0.23"	"0.00016"	"7/66"	"7"	"66"	"6085411.67327881"	"HCD"	"MS2"	"0"	"450.7"	"100.000"	"67.4831"	"22449"	"22449"	"22432"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"810.3"	""	"632.9"	""	"654.5"	""	"618.8"	""	"782.2"	"767.8"	""	"999"	"32"	"36.000"	"29.000"	"0.0334607362403555"	""	"0.0005161"	"0.007018"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"681.89789"	"1362.78850"	"1362.78807"	"0.32"	"0.00022"	"12/66"	"12"	"66"	"12192615.3075562"	"HCD"	"MS2"	"0"	"702.4"	"80.213"	"67.7215"	"22514"	"22514"	"22499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1280.0"	""	"909.9"	""	"997.8"	""	"997.6"	""	"1230.8"	"1233.2"	""	"941"	"32"	"36.000"	"29.000"	"0.0288775023430036"	""	"0.001049"	"0.008804"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"681.89795"	"1362.78862"	"1362.78807"	"0.41"	"0.00028"	"7/66"	"7"	"66"	"3088235.28253174"	"HCD"	"MS2"	"0"	"234.4"	"100.000"	"68.0071"	"22629"	"22629"	"22612"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"385.1"	""	"298.4"	""	"318.3"	""	"336.1"	""	"411.4"	"474.0"	""	"940"	"42"	"36.000"	"29.000"	"0.00290467708065055"	""	"0.0001991"	"0.002275"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"681.89795"	"1362.78862"	"1362.78807"	"0.41"	"0.00028"	"12/66"	"12"	"66"	"12405860.3839722"	"HCD"	"MS2"	"0"	"668.7"	"73.226"	"67.7688"	"22564"	"22564"	"22550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1173.1"	""	"872.3"	""	"881.7"	""	"1011.3"	"6.4"	"1183.4"	"1200.8"	""	"940"	"32"	"36.000"	"29.000"	"0.0286482341702879"	""	"0.0001991"	"0.005721"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEELGSK"	"[R].iEEELGSk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.2564"	"0.0000"	"1"	"1"	"1"	"681.89838"	"1362.78948"	"1362.78807"	"1.03"	"0.00070"	"7/66"	"7"	"66"	"6769475.90814209"	"HCD"	"MS2"	"0"	"510.4"	"100.000"	"67.4475"	"22403"	"22403"	"22391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"904.9"	""	"717.2"	""	"736.8"	""	"734.8"	""	"878.2"	"858.6"	""	"943"	"39"	"36.000"	"29.000"	"0.00646370752746729"	""	"0.0001991"	"0.005328"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVSNLEK"	"[R].qSVSNLEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"454.93729"	"1362.79731"	"1362.79930"	"-1.46"	"-0.00066"	"4/80"	"4"	"80"	"1148955.5612793"	"HCD"	"MS2"	"64.54319"	"72.5"	"100.000"	"42.6696"	"12343"	"12343"	"12314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"89.4"	""	"106.3"	""	"120.1"	""	"151.7"	"134.9"	""	"910"	"18"	"36.000"	"29.000"	"0.732843764006114"	"21"	"0.003568"	"0.03936"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATAGPGTTK"	"[K].tATAGPGTTk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"681.90295"	"1362.79863"	"1362.79930"	"-0.49"	"-0.00033"	"9/88"	"9"	"88"	"535009.00390625"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"28.5852"	"6649"	"6649"	"6624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.8"	""	"60.6"	""	"56.4"	""	"92.5"	""	"82.9"	"66.1"	""	"913"	"50"	"36.000"	"29.000"	"0.000483549325543432"	"20"	"0"	"6.709E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVSNLEK"	"[R].qSVSNLEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"454.93796"	"1362.79932"	"1362.79930"	"0.01"	"0.00001"	"7/80"	"7"	"80"	"868851.373352051"	"HCD"	"MS2"	"70.53777"	"55.8"	"100.000"	"42.3911"	"12263"	"12263"	"12242"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.6"	""	"74.5"	""	"76.0"	""	"92.3"	""	"113.9"	"110.2"	""	"913"	"15"	"36.000"	"29.000"	"1.42377309513888"	"21"	"0.004357"	"0.05117"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATAGPGTTK"	"[K].tATAGPGTTk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"681.90356"	"1362.79985"	"1362.79930"	"0.40"	"0.00028"	"9/88"	"9"	"88"	"602829.844055176"	"HCD"	"MS2"	"0"	"43.7"	"100.000"	"28.3618"	"6602"	"6602"	"6586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.5"	""	"53.7"	""	"63.2"	""	"87.8"	""	"93.5"	"61.9"	""	"865"	"57"	"36.000"	"29.000"	"8.68932641453276E-05"	"22"	"0"	"6.858E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEAMANK"	"[K].lEEAMANk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"682.38477"	"1363.76225"	"1363.76556"	"-2.42"	"-0.00165"	"14/60"	"14"	"60"	"347815.51373291"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"64.8121"	"21333"	"21333"	"21311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"26.3"	""	"39.7"	""	"42.4"	""	"75.8"	"90.9"	""	"952"	"43"	"36.000"	"29.000"	"0.00226259567548775"	"26"	"0"	"0.0003342"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTLGPMQK"	"[K].dTLGPmQk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q5RK09"	"Eukaryotic translation initiation factor 3 subunit G OS=Rattus norvegicus OX=10116 GN=Eif3g PE=1 SV=1"	"Q5RK09"	"Eukaryotic translation initiation factor 3 subunit G OS=Rattus norvegicus OX=10116 GN=Eif3g PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"682.38580"	"1363.76433"	"1363.76556"	"-0.90"	"-0.00061"	"5/60"	"5"	"60"	"531718.952453613"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"38.7991"	"10813"	"10813"	"10786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"36.8"	""	"49.7"	""	"96.7"	"2.7"	"86.0"	"81.8"	""	"921"	"18"	"36.000"	"29.000"	"0.733212118807064"	"19"	"0.005266"	"0.06781"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLNEAEK"	"[K].aMLNEAEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"682.38586"	"1363.76445"	"1363.76556"	"-0.81"	"-0.00055"	"11/68"	"11"	"68"	"509938.329711914"	"HCD"	"MS2"	"0"	"54.4"	"100.000"	"51.5792"	"15993"	"15993"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.9"	""	"61.2"	""	"56.0"	""	"79.9"	""	"114.0"	"136.1"	""	"923"	"18"	"36.000"	"29.000"	"0.80755424680028"	"16"	"0.00212"	"0.01918"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMLNEAEK"	"[K].aMLNEAEk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"682.38593"	"1363.76457"	"1363.76556"	"-0.72"	"-0.00049"	"9/68"	"9"	"68"	"459438.608276367"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"51.9061"	"16091"	"16091"	"16069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.9"	""	"53.8"	""	"58.9"	""	"71.9"	""	"99.9"	"113.9"	""	"924"	"19"	"36.000"	"29.000"	"0.585655162026325"	"16"	"0.002035"	"0.01849"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEAMANK"	"[K].lEEAMANk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"682.38623"	"1363.76518"	"1363.76556"	"-0.27"	"-0.00019"	"7/60"	"7"	"60"	"322190.927124023"	"HCD"	"MS2"	"31.9182"	"32.4"	"100.000"	"64.7603"	"21346"	"21346"	"21323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"30.6"	""	"50.2"	""	"42.5"	""	"65.3"	"68.9"	""	"909"	"46"	"36.000"	"29.000"	"0.00123462164768736"	"29"	"0"	"0.0001758"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLETSLK"	"[R].sQLETSLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"682.41229"	"1363.81731"	"1363.81970"	"-1.75"	"-0.00120"	"14/78"	"14"	"78"	"4307418.2130127"	"HCD"	"MS2"	"0"	"326.0"	"100.000"	"55.3024"	"17511"	"17511"	"17490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"505.2"	""	"413.7"	""	"428.6"	""	"523.7"	""	"608.9"	"612.2"	""	"663"	"45"	"35.000"	"28.000"	"0.00111297019121539"	""	"0.0001686"	"0.001147"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLETSLK"	"[R].sQLETSLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.5319"	"0.0000"	"1"	"1"	"1"	"682.41309"	"1363.81890"	"1363.81970"	"-0.59"	"-0.00040"	"14/78"	"14"	"78"	"4032172.35168457"	"HCD"	"MS2"	"5.392099"	"314.5"	"100.000"	"55.6476"	"17618"	"17618"	"17592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"467.4"	""	"403.2"	""	"440.8"	""	"499.3"	""	"587.0"	"587.2"	""	"662"	"47"	"35.000"	"28.000"	"0.0007191640902039"	""	"0.0001686"	"0.001858"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"682.87750"	"1364.74773"	"1364.74957"	"-1.35"	"-0.00092"	"7/68"	"7"	"68"	"2299800.55462646"	"HCD"	"MS2"	"0"	"184.9"	"100.000"	"65.8528"	"21757"	"21757"	"21739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.5"	""	"202.9"	""	"239.3"	""	"227.4"	"1.3"	"413.4"	"383.0"	""	"954"	"40"	"36.000"	"29.000"	"0.00469373297448061"	"26"	"0.0001686"	"0.001686"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"682.87750"	"1364.74773"	"1364.74957"	"-1.35"	"-0.00092"	"7/68"	"7"	"68"	"2429098.37365723"	"HCD"	"MS2"	"0"	"196.1"	"100.000"	"66.4624"	"22037"	"22037"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.3"	""	"187.9"	""	"269.8"	""	"244.4"	""	"444.3"	"433.9"	""	"954"	"40"	"36.000"	"29.000"	"0.00439054445726263"	"25"	"0.0001686"	"0.001913"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"455.58752"	"1364.74802"	"1364.74957"	"-1.14"	"-0.00052"	"6/68"	"6"	"68"	"3905343.5647583"	"HCD"	"MS2"	"5.456794"	"155.2"	"100.000"	"66.2347"	"21913"	"21913"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.2"	""	"169.6"	""	"194.9"	""	"181.0"	"0.2"	"350.0"	"355.4"	""	"953"	"29"	"36.000"	"29.000"	"0.0615265983876849"	"22"	"0.0005161"	"0.006497"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"455.58762"	"1364.74829"	"1364.74957"	"-0.94"	"-0.00043"	"6/68"	"6"	"68"	"1856531.83721924"	"HCD"	"MS2"	"43.08849"	"79.7"	"100.000"	"65.9470"	"21796"	"21796"	"21769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.5"	""	"86.7"	""	"100.9"	""	"98.8"	""	"186.0"	"170.9"	""	"949"	"31"	"36.000"	"29.000"	"0.0349330267761252"	"23"	"0.0001991"	"0.004401"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"455.58762"	"1364.74829"	"1364.74957"	"-0.94"	"-0.00043"	"8/68"	"8"	"68"	"2005642.08380127"	"HCD"	"MS2"	"35.27876"	"79.4"	"100.000"	"65.9805"	"21843"	"21843"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.6"	""	"88.9"	""	"99.9"	""	"101.7"	""	"181.6"	"165.1"	""	"949"	"30"	"36.000"	"29.000"	"0.0523885305143534"	"26"	"0.001951"	"0.01671"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"682.87781"	"1364.74834"	"1364.74957"	"-0.90"	"-0.00062"	"7/68"	"7"	"68"	"2331941.86932373"	"HCD"	"MS2"	"0"	"194.4"	"100.000"	"66.4406"	"21995"	"21995"	"21984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"281.7"	""	"191.4"	""	"239.3"	""	"222.2"	""	"466.9"	"464.2"	""	"947"	"40"	"36.000"	"29.000"	"0.00445984723953565"	"25"	"9.9E-05"	"0.0008337"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"682.87781"	"1364.74834"	"1364.74957"	"-0.90"	"-0.00062"	"7/68"	"7"	"68"	"17330444.7379761"	"HCD"	"MS2"	"0"	"779.0"	"61.624"	"66.1565"	"21882"	"21882"	"21865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1156.8"	""	"794.4"	""	"1038.1"	""	"885.7"	""	"1826.2"	"1707.3"	""	"947"	"41"	"36.000"	"29.000"	"0.00420068371699974"	"26"	"0.0001991"	"0.005222"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"455.58765"	"1364.74839"	"1364.74957"	"-0.87"	"-0.00040"	"6/68"	"6"	"68"	"3610778.7442627"	"HCD"	"MS2"	"4.934112"	"142.6"	"100.000"	"66.2976"	"21972"	"21972"	"21953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.5"	""	"151.2"	""	"180.5"	""	"164.0"	""	"334.2"	"318.7"	""	"956"	"31"	"36.000"	"29.000"	"0.0347078647654004"	"23"	"0.0005161"	"0.006756"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"682.87811"	"1364.74895"	"1364.74957"	"-0.46"	"-0.00031"	"7/68"	"7"	"68"	"2289034.67114258"	"HCD"	"MS2"	"0"	"179.2"	"100.000"	"65.8791"	"21801"	"21801"	"21784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"289.6"	""	"202.8"	""	"224.2"	""	"212.4"	""	"408.9"	"365.4"	""	"963"	"40"	"36.000"	"29.000"	"0.00446268559957157"	"26"	"0.0001686"	"0.001585"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDMAALEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"682.87842"	"1364.74956"	"1364.74957"	"-0.01"	"-0.00001"	"7/68"	"7"	"68"	"17447496.3442383"	"HCD"	"MS2"	"0"	"742.6"	"56.013"	"66.1853"	"21927"	"21927"	"21910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1127.5"	""	"765.5"	""	"973.6"	""	"836.8"	""	"1736.0"	"1619.3"	""	"952"	"42"	"36.000"	"29.000"	"0.00294175806465886"	"26"	"0.0001991"	"0.004084"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTEIVFAR"	"[R].yHTEIVFAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"455.58856"	"1364.75113"	"1364.75240"	"-0.93"	"-0.00042"	"7/66"	"7"	"66"	"3640649.84423828"	"HCD"	"MS2"	"13.49216"	"44.8"	"100.000"	"52.9449"	"16549"	"16549"	"16530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.3"	""	"65.6"	""	"57.7"	""	"67.6"	""	"95.3"	"86.3"	""	"978"	"42"	"36.000"	"29.000"	"0.00284648473489956"	"21"	"0"	"0.0002138"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTEIVFAR"	"[R].yHTEIVFAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"455.58871"	"1364.75159"	"1364.75240"	"-0.59"	"-0.00027"	"6/66"	"6"	"66"	"1483494.1126709"	"HCD"	"MS2"	"7.49635"	"35.3"	"100.000"	"53.5731"	"16772"	"16772"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"47.5"	""	"46.1"	""	"54.9"	"0.6"	"72.1"	"73.4"	""	"1002"	"32"	"36.000"	"30.000"	"0.0354680837976453"	"18"	"0.0001991"	"0.002577"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHTEIVFAR"	"[R].yHTEIVFAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"455.58887"	"1364.75205"	"1364.75240"	"-0.26"	"-0.00012"	"5/66"	"5"	"66"	"3390338.51824951"	"HCD"	"MS2"	"18.53806"	"41.8"	"100.000"	"53.2509"	"16640"	"16640"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"59.5"	""	"60.0"	""	"69.3"	"0.2"	"81.8"	"81.8"	""	"998"	"31"	"36.000"	"29.000"	"0.0386456437103457"	"20"	"9.9E-05"	"0.0006757"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNNMGLVK"	"[R].dNNmGLVk.[Q]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"682.88416"	"1364.76103"	"1364.76081"	"0.17"	"0.00011"	"11/68"	"11"	"68"	"396159.054138184"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"39.5045"	"11062"	"11062"	"11041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.0"	""	"32.5"	""	"38.7"	""	"76.9"	"0.3"	"56.7"	"61.0"	""	"1023"	"23"	"37.000"	"30.000"	"0.229533266950797"	"20"	"0.007443"	"0.09488"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTSDLQK"	"[R].nTTSDLQk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q923W4"	"Hepatoma-derived growth factor-related protein 3 OS=Rattus norvegicus OX=10116 GN=Hdgfl3 PE=1 SV=1"	"Q923W4"	"Hepatoma-derived growth factor-related protein 3 OS=Rattus norvegicus OX=10116 GN=Hdgfl3 PE=1 SV=1"	"0"	"2"	"2"	"0.5938"	"0.0000"	"1"	"1"	"1"	"682.89288"	"1364.77849"	"1364.77857"	"-0.06"	"-0.00004"	"12/76"	"12"	"76"	"304322.794067383"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"34.8760"	"9224"	"9224"	"9201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.4"	""	"39.2"	""	"36.0"	""	"62.5"	""	"64.3"	"60.7"	""	"938"	"32"	"36.000"	"29.000"	"0.0317082915458839"	"28"	"0.002559"	"0.02568"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTSDLQK"	"[R].nTTSDLQk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q923W4"	"Hepatoma-derived growth factor-related protein 3 OS=Rattus norvegicus OX=10116 GN=Hdgfl3 PE=1 SV=1"	"Q923W4"	"Hepatoma-derived growth factor-related protein 3 OS=Rattus norvegicus OX=10116 GN=Hdgfl3 PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"682.89307"	"1364.77886"	"1364.77857"	"0.21"	"0.00015"	"11/76"	"11"	"76"	"312639.377624512"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"35.0252"	"9246"	"9246"	"9225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.6"	""	"30.1"	""	"31.4"	""	"60.5"	""	"62.8"	"58.5"	""	"938"	"31"	"36.000"	"29.000"	"0.0340543694037087"	"28"	"0.0001686"	"0.001108"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSDPPLK"	"[R].sYSDPPLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"455.59845"	"1364.78080"	"1364.78259"	"-1.31"	"-0.00060"	"8/62"	"8"	"62"	"1435466.61663818"	"HCD"	"MS2"	"40.00066"	"69.9"	"100.000"	"54.1783"	"17019"	"17019"	"16993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.5"	"2.1"	"82.6"	""	"85.0"	""	"129.2"	"0.2"	"134.9"	"133.7"	""	"875"	"15"	"36.000"	"29.000"	"1.52748888021881"	"20"	"0.00212"	"0.01893"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSDPPLK"	"[R].sYSDPPLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"455.59872"	"1364.78162"	"1364.78259"	"-0.71"	"-0.00032"	"8/62"	"8"	"62"	"1850109.47949219"	"HCD"	"MS2"	"59.05255"	"96.5"	"100.000"	"53.8563"	"16921"	"16921"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.1"	""	"121.4"	""	"106.7"	""	"191.4"	"0.6"	"185.9"	"170.9"	""	"899"	"30"	"36.000"	"29.000"	"0.0484986551642308"	"29"	"0.0001991"	"0.004571"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSDPPLK"	"[R].sYSDPPLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"682.89453"	"1364.78179"	"1364.78259"	"-0.59"	"-0.00040"	"6/62"	"6"	"62"	"5150271.87597656"	"HCD"	"MS2"	"11.13332"	"335.1"	"100.000"	"53.9738"	"16969"	"16969"	"16958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"527.7"	""	"405.6"	""	"421.8"	""	"646.6"	"1.7"	"604.7"	"564.0"	""	"899"	"18"	"36.000"	"29.000"	"0.689810333768282"	"27"	"0.0009352"	"0.007914"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSDPPLK"	"[R].sYSDPPLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"682.89453"	"1364.78179"	"1364.78259"	"-0.59"	"-0.00040"	"6/62"	"6"	"62"	"4904040.31365967"	"HCD"	"MS2"	"11.541"	"335.1"	"100.000"	"54.4129"	"17114"	"17114"	"17098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"518.4"	""	"404.4"	""	"442.4"	""	"640.2"	"1.6"	"615.7"	"549.9"	""	"899"	"17"	"36.000"	"29.000"	"0.835083102563718"	"29"	"0.001316"	"0.01042"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSDPPLK"	"[R].sYSDPPLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"682.89496"	"1364.78264"	"1364.78259"	"0.04"	"0.00003"	"8/62"	"8"	"62"	"1150984.36047363"	"HCD"	"MS2"	"28.7909"	"94.7"	"100.000"	"53.6974"	"16856"	"16856"	"16832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.5"	""	"110.5"	""	"111.9"	""	"182.0"	""	"181.3"	"182.8"	""	"964"	"8"	"36.000"	"29.000"	"7.2785863430712"	"20"	"0.005266"	"0.06676"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSDPPLK"	"[R].sYSDPPLk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"682.89508"	"1364.78288"	"1364.78259"	"0.22"	"0.00015"	"10/62"	"10"	"62"	"1875967.35272217"	"HCD"	"MS2"	"23.97146"	"144.9"	"100.000"	"54.0955"	"16985"	"16985"	"16961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.4"	""	"170.4"	""	"170.4"	""	"292.9"	""	"291.4"	"244.5"	""	"965"	"16"	"36.000"	"29.000"	"1.13369783605931"	"20"	"0.001217"	"0.009362"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"682.89600"	"1364.78472"	"1364.78596"	"-0.91"	"-0.00062"	"5/60"	"5"	"60"	"2473546.16149902"	"HCD"	"MS2"	"4.09332"	"194.3"	"100.000"	"78.3840"	"26837"	"26837"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.3"	""	"292.8"	""	"325.9"	""	"171.1"	""	"319.1"	"447.5"	""	"941"	"29"	"36.000"	"29.000"	"0.0581513267435643"	"23"	"0.0001991"	"0.002627"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"682.89612"	"1364.78496"	"1364.78596"	"-0.73"	"-0.00050"	"7/60"	"7"	"60"	"1019868.04364014"	"HCD"	"MS2"	"19.94074"	"89.9"	"100.000"	"78.0820"	"26713"	"26713"	"26698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.4"	""	"139.4"	""	"145.0"	""	"95.9"	"2.4"	"149.6"	"176.9"	""	"947"	"40"	"36.000"	"29.000"	"0.0052157886306786"	"24"	"9.9E-05"	"0.0006004"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEMk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"682.89630"	"1364.78533"	"1364.78596"	"-0.46"	"-0.00032"	"14/60"	"14"	"60"	"2569503.93408203"	"HCD"	"MS2"	"4.402327"	"201.3"	"100.000"	"78.4831"	"26904"	"26904"	"26887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"313.3"	""	"294.1"	""	"345.6"	""	"180.6"	""	"340.7"	"433.6"	""	"949"	"29"	"36.000"	"29.000"	"0.058645705716942"	"23"	"0.0001991"	"0.004206"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVSVTASGK"	"[R].gTVSVTASGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"682.91034"	"1364.81340"	"1364.81495"	"-1.13"	"-0.00077"	"14/84"	"14"	"84"	"310028.086181641"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"40.0781"	"11293"	"11293"	"11272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"42.4"	""	"37.5"	""	"56.6"	"0.6"	"43.5"	"53.3"	""	"607"	"39"	"34.000"	"27.000"	"0.00376841475354296"	"24"	"0"	"0.0002222"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVSVTASGK"	"[R].gTVSVTASGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"682.91071"	"1364.81413"	"1364.81495"	"-0.60"	"-0.00041"	"8/84"	"8"	"84"	"2850965.47650146"	"HCD"	"MS2"	"0"	"202.9"	"100.000"	"40.3998"	"11424"	"11424"	"11405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.3"	""	"355.9"	""	"282.5"	""	"328.9"	"4.6"	"365.5"	"339.9"	""	"618"	"59"	"34.000"	"27.000"	"4.26538737762292E-05"	"27"	"0"	"1.579E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVSVTASGK"	"[R].gTVSVTASGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"682.91089"	"1364.81450"	"1364.81495"	"-0.33"	"-0.00022"	"9/84"	"9"	"84"	"2517960.06109619"	"HCD"	"MS2"	"0"	"183.0"	"100.000"	"40.3504"	"11438"	"11438"	"11418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.5"	""	"320.8"	""	"249.1"	""	"295.7"	""	"305.1"	"338.8"	""	"623"	"58"	"34.000"	"27.000"	"4.61804383522965E-05"	"27"	"0"	"2.651E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVSVTASGK"	"[R].gTVSVTASGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"682.91211"	"1364.81694"	"1364.81495"	"1.46"	"0.00100"	"8/84"	"8"	"84"	"478169.707336426"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"40.0303"	"11308"	"11308"	"11282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.6"	""	"72.4"	""	"60.5"	""	"56.8"	""	"68.2"	"73.8"	""	"579"	"60"	"34.000"	"27.000"	"2.80316439387631E-05"	"26"	"0"	"2.286E-06"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVYAEVK"	"[K].tPVYAEVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"682.91272"	"1364.81816"	"1364.81897"	"-0.59"	"-0.00041"	"7/66"	"7"	"66"	"751934.321289063"	"HCD"	"MS2"	"6.96454"	"57.0"	"100.000"	"59.6194"	"19227"	"19227"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.5"	""	"71.9"	""	"78.2"	""	"91.9"	""	"107.8"	"116.1"	""	"578"	"41"	"34.000"	"27.000"	"0.00205540705445812"	"20"	"0.0001991"	"0.004624"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVYAEVK"	"[K].tPVYAEVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"682.91296"	"1364.81865"	"1364.81897"	"-0.24"	"-0.00016"	"7/66"	"7"	"66"	"825009.709350586"	"HCD"	"MS2"	"10.41396"	"67.7"	"100.000"	"59.3250"	"19107"	"19107"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.0"	""	"83.9"	""	"93.4"	""	"120.8"	"0.4"	"128.7"	"133.8"	""	"575"	"37"	"34.000"	"27.000"	"0.00581618013870003"	"19"	"0.0009352"	"0.008297"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVYAEVK"	"[K].tPVYAEVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"682.91309"	"1364.81890"	"1364.81897"	"-0.06"	"-0.00004"	"7/66"	"7"	"66"	"889319.333312988"	"HCD"	"MS2"	"4.156393"	"67.9"	"100.000"	"59.3846"	"19166"	"19166"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.3"	""	"91.3"	""	"85.9"	""	"105.2"	""	"135.4"	"139.5"	""	"575"	"42"	"34.000"	"27.000"	"0.00202133291966602"	"23"	"0.0001991"	"0.005483"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVYAEVK"	"[K].tPVYAEVk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"682.91412"	"1364.82097"	"1364.81897"	"1.46"	"0.00100"	"6/66"	"6"	"66"	"612421.17175293"	"HCD"	"MS2"	"15.25324"	"52.6"	"100.000"	"59.0763"	"19041"	"19041"	"19014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.6"	""	"72.1"	""	"57.2"	""	"77.8"	"1.5"	"113.1"	"101.9"	""	"576"	"31"	"34.000"	"27.000"	"0.0210083762953316"	"17"	"0.003818"	"0.04151"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTENAFSPSR"	"[K].qTENAFSPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"683.35071"	"1365.69414"	"1365.69601"	"-1.37"	"-0.00093"	"8/104"	"8"	"104"	"538420.604675293"	"HCD"	"MS2"	"42.99929"	"32.7"	"100.000"	"33.2577"	"8530"	"8530"	"8508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"35.6"	""	"33.4"	""	"70.2"	"0.1"	"64.3"	"70.7"	""	"701"	"28"	"35.000"	"28.000"	"0.0542860224928824"	"21"	"0.0001686"	"0.001444"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTENAFSPSR"	"[K].qTENAFSPSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"683.35077"	"1365.69426"	"1365.69601"	"-1.28"	"-0.00087"	"8/104"	"8"	"104"	"584370.424804688"	"HCD"	"MS2"	"36.84958"	"33.8"	"100.000"	"33.1011"	"8504"	"8504"	"8478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"28.0"	""	"33.9"	""	"75.6"	""	"72.9"	"63.0"	""	"701"	"25"	"35.000"	"28.000"	"0.102964620301252"	"21"	"9.9E-05"	"0.0004565"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGGSGQVSER"	"[K].fIGGSGQVSER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"683.36810"	"1365.72893"	"1365.73239"	"-2.54"	"-0.00173"	"6/98"	"6"	"98"	"328279.779663086"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"46.8489"	"14038"	"14038"	"14020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"26.7"	""	"32.6"	""	"44.8"	""	"65.1"	"61.5"	""	"867"	"40"	"36.000"	"29.000"	"0.00406433130002369"	"24"	"0.0001991"	"0.003359"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGGSGQVSER"	"[K].fIGGSGQVSER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"683.36920"	"1365.73113"	"1365.73239"	"-0.93"	"-0.00063"	"6/98"	"6"	"98"	"447411.817443848"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"46.5489"	"13919"	"13919"	"13902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"35.5"	""	"37.4"	""	"55.5"	"1.0"	"71.5"	"60.2"	""	"911"	"37"	"36.000"	"29.000"	"0.00821274580961535"	"22"	"9.9E-05"	"0.000815"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIGGSGQVSER"	"[K].fIGGSGQVSER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"683.36951"	"1365.73174"	"1365.73239"	"-0.48"	"-0.00033"	"8/98"	"8"	"98"	"484244.926208496"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"46.2563"	"13837"	"13837"	"13820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"43.9"	""	"40.1"	""	"57.9"	""	"75.5"	"74.8"	""	"906"	"49"	"36.000"	"29.000"	"0.000576896895700548"	"23"	"0"	"0.0001384"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"683.37109"	"1365.73491"	"1365.73642"	"-1.10"	"-0.00075"	"7/76"	"7"	"76"	"1274303.69824219"	"HCD"	"MS2"	"1.615544"	"66.0"	"100.000"	"109.8612"	"39465"	"39465"	"39453"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.4"	""	"75.9"	""	"114.2"	""	"114.8"	""	"116.0"	"124.2"	""	"908"	"35"	"36.000"	"29.000"	"0.0153835246887198"	"21"	"0"	"0.0002571"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGFLLDGFPR"	"[K].nGFLLDGFPR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"683.37134"	"1365.73540"	"1365.73642"	"-0.75"	"-0.00051"	"6/90"	"6"	"90"	"668271.885620117"	"HCD"	"MS2"	"3.940575"	"36.2"	"100.000"	"112.2523"	"40436"	"40436"	"40415"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.4"	""	"41.6"	""	"55.7"	""	"68.7"	"0.6"	"63.9"	"76.5"	""	"939"	"46"	"36.000"	"29.000"	"0.0012695084519491"	"20"	"0"	"0.0001213"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"683.37146"	"1365.73564"	"1365.73642"	"-0.57"	"-0.00039"	"6/76"	"6"	"76"	"1194219.19000244"	"HCD"	"MS2"	"8.042963"	"58.5"	"100.000"	"109.5696"	"39350"	"39350"	"39337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.5"	""	"75.2"	""	"87.4"	""	"119.7"	""	"90.4"	"112.9"	""	"926"	"41"	"36.000"	"29.000"	"0.00366084204763918"	"21"	"0"	"0.0001432"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"683.37152"	"1365.73577"	"1365.73642"	"-0.48"	"-0.00033"	"7/76"	"7"	"76"	"2257137.42578125"	"HCD"	"MS2"	"0.755283"	"103.2"	"100.000"	"109.5719"	"39339"	"39339"	"39332"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.3"	""	"135.8"	""	"150.6"	""	"203.4"	""	"176.2"	"199.5"	""	"923"	"36"	"36.000"	"29.000"	"0.0109691179227738"	"23"	"0"	"0.0003105"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"683.37164"	"1365.73601"	"1365.73642"	"-0.30"	"-0.00020"	"7/76"	"7"	"76"	"1147952.86706543"	"HCD"	"MS2"	"8.486292"	"55.8"	"100.000"	"109.3099"	"39239"	"39239"	"39230"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.3"	""	"72.5"	""	"80.1"	""	"110.0"	"0.1"	"93.4"	"107.4"	""	"923"	"36"	"36.000"	"29.000"	"0.0104995746430131"	"19"	"0"	"0.0001399"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGFLLDGFPR"	"[K].nGFLLDGFPR.[T]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"P29410"	"Adenylate kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak2 PE=2 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"683.37219"	"1365.73711"	"1365.73642"	"0.51"	"0.00035"	"8/90"	"8"	"90"	"723619.491088867"	"HCD"	"MS2"	"4.883963"	"40.8"	"100.000"	"112.1922"	"40398"	"40398"	"40377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.6"	""	"44.2"	""	"53.0"	""	"71.4"	""	"70.3"	"96.6"	""	"939"	"36"	"36.000"	"29.000"	"0.0119024289201877"	"23"	"0"	"7.289E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVAFWSELR"	"[K].eVAFWSELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.37286"	"1365.73845"	"1365.73642"	"1.49"	"0.00102"	"6/76"	"6"	"76"	"295215.249511719"	"HCD"	"MS2"	"46.15775"	"19.7"	"100.000"	"109.8510"	"39448"	"39448"	"39433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"22.1"	""	"50.8"	""	"25.0"	""	"29.3"	"36.6"	""	"928"	"28"	"36.000"	"29.000"	"0.076827726304986"	"14"	"0.0001686"	"0.001452"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDGTITTK"	"[K].dGDGTITTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"683.38403"	"1365.76079"	"1365.76258"	"-1.31"	"-0.00090"	"8/78"	"8"	"78"	"2311589.06347656"	"HCD"	"MS2"	"0"	"175.7"	"100.000"	"37.1368"	"10137"	"10137"	"10118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.6"	""	"137.8"	""	"152.8"	""	"508.7"	""	"408.9"	"345.4"	""	"911"	"45"	"36.000"	"29.000"	"0.00149103686517311"	"24"	"0"	"0.0002158"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDGTITTK"	"[K].dGDGTITTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"P0DP29"	"Calmodulin-1 OS=Rattus norvegicus OX=10116 GN=Calm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"683.38446"	"1365.76164"	"1365.76258"	"-0.69"	"-0.00047"	"8/78"	"8"	"78"	"2068974.52679443"	"HCD"	"MS2"	"0"	"158.8"	"100.000"	"37.1638"	"10111"	"10111"	"10084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.2"	""	"120.2"	""	"145.0"	""	"456.7"	""	"383.4"	"303.6"	""	"910"	"47"	"36.000"	"29.000"	"0.000853122501170675"	"25"	"0"	"7.353E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQDTPGVK"	"[R].yQDTPGVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"683.39209"	"1365.77690"	"1365.77784"	"-0.68"	"-0.00047"	"7/70"	"7"	"70"	"4527170.41790771"	"HCD"	"MS2"	"5.530094"	"321.1"	"100.000"	"43.1944"	"12591"	"12591"	"12571"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"556.7"	""	"430.9"	""	"465.1"	""	"482.3"	"0.3"	"513.9"	"587.4"	""	"850"	"42"	"36.000"	"29.000"	"0.00264477621196893"	"25"	"0.0001991"	"0.003241"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQDTPGVK"	"[R].yQDTPGVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"683.39240"	"1365.77751"	"1365.77784"	"-0.24"	"-0.00016"	"12/70"	"12"	"70"	"2180731.23321533"	"HCD"	"MS2"	"18.47805"	"156.6"	"100.000"	"43.6744"	"12753"	"12753"	"12732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.0"	""	"193.3"	""	"214.4"	""	"217.1"	""	"302.8"	"345.7"	""	"835"	"36"	"36.000"	"29.000"	"0.0115519813695931"	"23"	"0.0001991"	"0.002082"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQDTPGVK"	"[R].yQDTPGVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"683.39240"	"1365.77751"	"1365.77784"	"-0.24"	"-0.00016"	"7/70"	"7"	"70"	"4131406.40563965"	"HCD"	"MS2"	"3.535312"	"310.3"	"100.000"	"43.3711"	"12629"	"12629"	"12608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"536.8"	""	"423.6"	""	"461.3"	""	"463.3"	""	"469.9"	"581.6"	""	"835"	"39"	"36.000"	"29.000"	"0.0051482126787307"	"25"	"0.0001991"	"0.003324"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQDTPGVK"	"[R].yQDTPGVk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"683.39246"	"1365.77764"	"1365.77784"	"-0.15"	"-0.00010"	"12/70"	"12"	"70"	"2282946.18304443"	"HCD"	"MS2"	"19.7196"	"159.5"	"100.000"	"43.5067"	"12719"	"12719"	"12698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"223.6"	""	"217.6"	""	"214.1"	""	"225.4"	""	"288.8"	"344.5"	""	"835"	"31"	"36.000"	"29.000"	"0.0335472156012495"	"22"	"0.0001686"	"0.001964"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQLEGSK"	"[K].mVQLEGSk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"683.39282"	"1365.77837"	"1365.78121"	"-2.08"	"-0.00142"	"7/70"	"7"	"70"	"990978.884887695"	"HCD"	"MS2"	"0"	"68.5"	"100.000"	"44.9211"	"13294"	"13294"	"13267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.9"	""	"91.8"	"2.4"	"103.4"	""	"120.9"	"2.0"	"112.0"	"105.4"	""	"869"	"27"	"36.000"	"29.000"	"0.0903628210546556"	"24"	"0.007989"	"0.1011"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGQLGLDHLR"	"[K].aGGQLGLDHLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"455.93112"	"1365.77881"	"1365.78001"	"-0.88"	"-0.00040"	"14/94"	"14"	"94"	"2220589.21923828"	"HCD"	"MS2"	"11.61193"	"46.6"	"100.000"	"47.8442"	"14442"	"14442"	"14422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"47.3"	""	"85.2"	""	"73.8"	""	"87.8"	"86.3"	""	"869"	"47"	"36.000"	"29.000"	"0.000924676415479488"	"19"	"0"	"9.309E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGQLGLDHLR"	"[K].aGGQLGLDHLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"455.93115"	"1365.77890"	"1365.78001"	"-0.81"	"-0.00037"	"13/94"	"13"	"94"	"1961618.02514648"	"HCD"	"MS2"	"4.466847"	"44.1"	"100.000"	"47.5289"	"14351"	"14351"	"14335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.2"	""	"45.2"	""	"95.7"	""	"76.3"	""	"75.7"	"76.6"	""	"869"	"46"	"36.000"	"29.000"	"0.00119947107852774"	"19"	"0"	"0.0001063"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQLEGSK"	"[K].mVQLEGSk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"683.39398"	"1365.78069"	"1365.78121"	"-0.38"	"-0.00026"	"7/70"	"7"	"70"	"2216324.0692749"	"HCD"	"MS2"	"0"	"126.4"	"100.000"	"45.2110"	"13412"	"13412"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.3"	""	"149.2"	""	"178.6"	""	"275.0"	"0.6"	"206.6"	"203.1"	""	"857"	"29"	"36.000"	"29.000"	"0.0497680731030586"	"22"	"0.003749"	"0.04033"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQLEGSK"	"[K].mVQLEGSk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"683.39429"	"1365.78130"	"1365.78121"	"0.07"	"0.00004"	"7/70"	"7"	"70"	"1196061.48040771"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"45.5457"	"13514"	"13514"	"13494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.3"	""	"92.5"	""	"103.6"	""	"172.5"	"3.5"	"129.7"	"118.2"	""	"853"	"30"	"36.000"	"29.000"	"0.0446600325743709"	"24"	"0.002834"	"0.03015"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVQLEGSK"	"[K].mVQLEGSk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"683.39447"	"1365.78166"	"1365.78121"	"0.33"	"0.00023"	"7/70"	"7"	"70"	"1451580.95159912"	"HCD"	"MS2"	"6.098993"	"92.1"	"100.000"	"45.2282"	"13385"	"13385"	"13362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.4"	""	"115.6"	""	"155.4"	""	"165.3"	"2.6"	"140.8"	"130.4"	""	"853"	"32"	"36.000"	"29.000"	"0.028178575557524"	"22"	"0.003704"	"0.04006"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"455.93759"	"1365.79822"	"1365.80517"	"-5.08"	"-0.00231"	"10/78"	"10"	"78"	"2033126.75811768"	"HCD"	"MS2"	"46.33374"	"36.3"	"100.000"	"55.5521"	"17613"	"17613"	"17591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"41.7"	""	"49.8"	""	"62.1"	"2.2"	"69.0"	"72.3"	""	"763"	"47"	"35.000"	"28.000"	"0.000811885046042405"	"17"	"0"	"0.0003085"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"455.93872"	"1365.80161"	"1365.80517"	"-2.60"	"-0.00119"	"10/78"	"10"	"78"	"1165507.18017578"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"56.3624"	"17903"	"17903"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"37.6"	""	"32.6"	""	"39.3"	"0.3"	"55.9"	"50.4"	""	"739"	"39"	"35.000"	"28.000"	"0.00472731391886205"	"25"	"9.9E-05"	"0.0004632"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"455.93918"	"1365.80298"	"1365.80517"	"-1.60"	"-0.00073"	"10/78"	"10"	"78"	"1864435.16540527"	"HCD"	"MS2"	"40.15312"	"35.3"	"100.000"	"55.9683"	"17747"	"17747"	"17730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.4"	""	"48.5"	""	"47.7"	""	"64.7"	""	"67.3"	"66.2"	""	"737"	"47"	"35.000"	"28.000"	"0.000819289694705042"	"19"	"0"	"0.0001853"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"455.93939"	"1365.80362"	"1365.80517"	"-1.13"	"-0.00051"	"12/78"	"12"	"78"	"8664524.44763184"	"HCD"	"MS2"	"17.25955"	"103.2"	"100.000"	"54.2979"	"17101"	"17101"	"17079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.5"	""	"130.7"	""	"136.9"	""	"182.9"	"1.5"	"194.0"	"189.2"	""	"727"	"52"	"35.000"	"28.000"	"0.00025497900097566"	"19"	"0"	"7.768E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"455.93942"	"1365.80371"	"1365.80517"	"-1.06"	"-0.00048"	"10/78"	"10"	"78"	"2342708.09301758"	"HCD"	"MS2"	"17.8165"	"36.3"	"100.000"	"52.8045"	"16492"	"16492"	"16466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.0"	""	"41.2"	""	"58.4"	""	"65.5"	""	"68.5"	"66.7"	""	"727"	"36"	"35.000"	"28.000"	"0.0101742970968709"	"23"	"9.9E-05"	"0.0007242"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVVPSPLPTR"	"[R].gNVVPSPLPTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"683.40564"	"1365.80400"	"1365.80517"	"-0.85"	"-0.00058"	"10/106"	"10"	"106"	"557308.894287109"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"62.6551"	"20491"	"20491"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"48.9"	""	"49.5"	""	"75.7"	""	"67.1"	"69.7"	""	"727"	"55"	"35.000"	"28.000"	"0.000108768819540708"	"22"	"0"	"2.319E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"683.40570"	"1365.80412"	"1365.80517"	"-0.76"	"-0.00052"	"8/78"	"8"	"78"	"3021227.41241455"	"HCD"	"MS2"	"0"	"133.8"	"100.000"	"55.2035"	"17436"	"17436"	"17418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.5"	""	"198.9"	""	"195.3"	""	"188.9"	"0.8"	"236.9"	"247.3"	""	"727"	"58"	"35.000"	"28.000"	"5.45135437705112E-05"	"20"	"0"	"3.049E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"455.93958"	"1365.80417"	"1365.80517"	"-0.73"	"-0.00033"	"13/78"	"13"	"78"	"18649469.6300049"	"HCD"	"MS2"	"2.608338"	"86.3"	"57.879"	"55.1738"	"17459"	"17459"	"17442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.8"	""	"113.0"	""	"122.1"	""	"137.8"	"0.9"	"164.7"	"151.0"	""	"727"	"69"	"35.000"	"28.000"	"4.74793117835924E-06"	"23"	"0"	"2.47E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.40582"	"1365.80437"	"1365.80517"	"-0.58"	"-0.00040"	"15/78"	"15"	"78"	"3805017.48010254"	"HCD"	"MS2"	"0"	"158.0"	"100.000"	"54.8013"	"17307"	"17307"	"17290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"244.0"	""	"234.2"	""	"230.7"	""	"227.6"	"2.6"	"271.3"	"284.9"	""	"729"	"61"	"35.000"	"28.000"	"3.24113807459222E-05"	"16"	"0"	"1.645E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"683.40588"	"1365.80449"	"1365.80517"	"-0.49"	"-0.00034"	"8/78"	"8"	"78"	"657969.501098633"	"HCD"	"MS2"	"10.06572"	"52.7"	"100.000"	"55.5279"	"17569"	"17569"	"17544"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.9"	""	"70.9"	""	"71.9"	""	"78.7"	"1.5"	"102.3"	"92.4"	""	"729"	"51"	"35.000"	"28.000"	"0.000264056907447334"	"20"	"0"	"2.201E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"455.93979"	"1365.80481"	"1365.80517"	"-0.26"	"-0.00012"	"13/78"	"13"	"78"	"19281570.3216553"	"HCD"	"MS2"	"2.664369"	"94.8"	"56.104"	"55.5464"	"17577"	"17577"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.5"	""	"133.8"	""	"132.1"	""	"152.4"	"0.2"	"169.7"	"173.3"	""	"729"	"69"	"35.000"	"28.000"	"4.82722489578455E-06"	"23"	"0"	"3.046E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"683.40607"	"1365.80486"	"1365.80517"	"-0.23"	"-0.00015"	"8/78"	"8"	"78"	"838271.761230469"	"HCD"	"MS2"	"2.586427"	"49.7"	"100.000"	"55.1116"	"17433"	"17433"	"17410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"63.9"	""	"72.0"	""	"73.5"	""	"94.7"	"91.4"	""	"729"	"52"	"35.000"	"28.000"	"0.000214139868997104"	"18"	"0"	"4.938E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVVPSPLPTR"	"[R].gNVVPSPLPTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"683.40607"	"1365.80486"	"1365.80517"	"-0.23"	"-0.00015"	"10/106"	"10"	"106"	"877737.93157959"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"62.3534"	"20368"	"20368"	"20345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.4"	""	"60.7"	""	"61.8"	""	"70.5"	""	"93.2"	"78.5"	""	"729"	"44"	"35.000"	"28.000"	"0.00131128632664268"	"20"	"0"	"0.0002205"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVVPSPLPTR"	"[R].gNVVPSPLPTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.40631"	"1365.80535"	"1365.80517"	"0.13"	"0.00009"	"6/106"	"6"	"106"	"501591.574523926"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"62.7351"	"20490"	"20490"	"20469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"39.1"	""	"42.3"	""	"63.0"	""	"72.3"	"65.6"	""	"696"	"31"	"35.000"	"28.000"	"0.0268892843613304"	"14"	"0.000885"	"0.00777"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNVVPSPLPTR"	"[R].gNVVPSPLPTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"Q9WU49"	"Calcium-regulated heat stable protein 1 OS=Rattus norvegicus OX=10116 GN=Carhsp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"683.40631"	"1365.80535"	"1365.80517"	"0.13"	"0.00009"	"6/106"	"6"	"106"	"868771.757263184"	"HCD"	"MS2"	"5.632381"	"42.9"	"100.000"	"62.4126"	"20359"	"20359"	"20333"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"59.6"	""	"67.1"	""	"74.4"	""	"77.6"	"73.3"	""	"696"	"30"	"35.000"	"28.000"	"0.0349606295016881"	"19"	"0.0001991"	"0.004479"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9815"	"0.0000"	"1"	"1"	"1"	"455.93997"	"1365.80536"	"1365.80517"	"0.14"	"0.00007"	"12/78"	"12"	"78"	"6333873.38970947"	"HCD"	"MS2"	"19.61691"	"93.5"	"100.000"	"54.6384"	"17206"	"17206"	"17188"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.2"	""	"132.1"	""	"116.0"	""	"168.2"	""	"175.5"	"178.8"	""	"696"	"54"	"35.000"	"28.000"	"0.00014742775218524"	"17"	"0"	"1.361E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9808"	"0.0000"	"1"	"1"	"1"	"683.40643"	"1365.80559"	"1365.80517"	"0.31"	"0.00021"	"8/78"	"8"	"78"	"3607997.41375732"	"HCD"	"MS2"	"2.251465"	"209.0"	"100.000"	"54.5186"	"17191"	"17191"	"17173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"313.9"	""	"275.5"	""	"295.7"	""	"310.4"	""	"381.0"	"405.4"	""	"704"	"52"	"35.000"	"28.000"	"0.000230431933271681"	"17"	"0"	"5.887E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.40674"	"1365.80620"	"1365.80517"	"0.76"	"0.00052"	"8/78"	"8"	"78"	"3329425.28771973"	"HCD"	"MS2"	"0"	"181.9"	"100.000"	"54.8913"	"17309"	"17309"	"17287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"277.8"	""	"253.7"	""	"261.8"	""	"269.6"	""	"329.6"	"334.7"	""	"700"	"53"	"35.000"	"28.000"	"0.000193227103748265"	"16"	"0"	"5.031E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"455.94061"	"1365.80729"	"1365.80517"	"1.55"	"0.00071"	"13/78"	"13"	"78"	"168978563.647949"	"HCD"	"MS2"	"1.824538"	"83.5"	"7.166"	"54.8656"	"17333"	"17333"	"17321"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.1"	""	"116.3"	""	"118.9"	""	"131.8"	""	"148.6"	"153.8"	""	"694"	"69"	"35.000"	"28.000"	"4.50121207031433E-06"	"23"	"0"	"4.048E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"455.94061"	"1365.80729"	"1365.80517"	"1.55"	"0.00071"	"12/78"	"12"	"78"	"177112345.851074"	"HCD"	"MS2"	"1.978672"	"118.6"	"9.226"	"54.9557"	"17336"	"17336"	"17319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.4"	"1.7"	"161.8"	""	"180.7"	""	"193.5"	""	"192.1"	"218.8"	""	"694"	"60"	"35.000"	"28.000"	"3.41451853699114E-05"	"24"	"0"	"9.828E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8986"	"0.0000"	"1"	"1"	"1"	"455.94067"	"1365.80747"	"1365.80517"	"1.69"	"0.00077"	"13/78"	"13"	"78"	"173815420.333984"	"HCD"	"MS2"	"1.777832"	"110.1"	"8.668"	"54.5900"	"17221"	"17221"	"17204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.6"	""	"147.4"	""	"149.4"	""	"166.4"	""	"195.3"	"205.0"	""	"663"	"69"	"35.000"	"28.000"	"4.3700210883145E-06"	"24"	"0"	"1.443E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSELPIVHR"	"[R].sVSELPIVHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"455.94128"	"1365.80930"	"1365.80517"	"3.03"	"0.00138"	"12/78"	"12"	"78"	"185902773.884766"	"HCD"	"MS2"	"1.691548"	"105.7"	"8.070"	"55.2381"	"17451"	"17451"	"17434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.3"	""	"138.5"	""	"145.3"	""	"163.0"	""	"194.9"	"201.6"	""	"632"	"54"	"34.000"	"28.000"	"0.000118218945893969"	"20"	"0"	"0.0001654"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNVTTIDTAR"	"[K].fNVTTIDTAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M883"	"Chloride intracellular channel protein 2 OS=Rattus norvegicus OX=10116 GN=Clic2 PE=2 SV=1"	"Q5M883"	"Chloride intracellular channel protein 2 OS=Rattus norvegicus OX=10116 GN=Clic2 PE=2 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"683.87939"	"1366.75151"	"1366.75280"	"-0.94"	"-0.00064"	"5/96"	"5"	"96"	"462135.604980469"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"76.9310"	"26283"	"26283"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.7"	""	"50.3"	""	"50.4"	""	"53.9"	"0.6"	"51.5"	"54.4"	""	"977"	"27"	"36.000"	"29.000"	"0.101827379639303"	"27"	"0.0001991"	"0.003679"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYSGVGLLSR"	"[K].eGYSGVGLLSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"683.87939"	"1366.75151"	"1366.75280"	"-0.94"	"-0.00064"	"8/98"	"8"	"98"	"951042.320861816"	"HCD"	"MS2"	"16.45005"	"62.6"	"100.000"	"72.5471"	"24470"	"24470"	"24448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.2"	""	"81.4"	""	"89.4"	""	"104.3"	"0.8"	"117.5"	"107.2"	""	"977"	"45"	"36.000"	"29.000"	"0.00158439903075157"	"19"	"0"	"8.166E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGYSGVGLLSR"	"[K].eGYSGVGLLSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"P43138"	"DNA-(apurinic or apyrimidinic site) lyase OS=Rattus norvegicus OX=10116 GN=Apex1 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"683.88007"	"1366.75286"	"1366.75280"	"0.04"	"0.00003"	"9/98"	"9"	"98"	"1040364.82794189"	"HCD"	"MS2"	"15.40477"	"69.1"	"100.000"	"72.6500"	"24541"	"24541"	"24526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"87.0"	""	"88.7"	""	"103.9"	""	"126.8"	"144.5"	""	"987"	"53"	"36.000"	"29.000"	"0.000257209589930357"	"23"	"0"	"9.656E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.2353"	"0.0000"	"1"	"1"	"1"	"683.88306"	"1366.75884"	"1366.76185"	"-2.21"	"-0.00151"	"7/64"	"7"	"64"	"1366737.02282715"	"HCD"	"MS2"	"53.23092"	"97.1"	"100.000"	"60.6187"	"19666"	"19666"	"19644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.7"	""	"131.4"	""	"132.2"	""	"156.5"	""	"162.0"	"162.8"	""	"925"	"34"	"36.000"	"29.000"	"0.018118061816235"	""	"0.0001991"	"0.002128"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"683.88367"	"1366.76006"	"1366.76185"	"-1.31"	"-0.00090"	"14/64"	"14"	"64"	"2121276.78118896"	"HCD"	"MS2"	"15.26729"	"149.1"	"100.000"	"61.2061"	"19904"	"19904"	"19888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.1"	""	"188.9"	""	"208.3"	""	"228.0"	""	"263.3"	"298.5"	""	"899"	"42"	"36.000"	"29.000"	"0.00310262791826189"	""	"0.0001991"	"0.002502"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELDFQK"	"[K].eELDFQk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"683.88397"	"1366.76067"	"1366.76185"	"-0.87"	"-0.00059"	"12/56"	"12"	"56"	"476810.554992676"	"HCD"	"MS2"	"9.327362"	"45.4"	"100.000"	"73.9153"	"25057"	"25057"	"25035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"22.5"	""	"15.7"	""	"90.1"	""	"123.6"	"149.0"	""	"916"	"22"	"36.000"	"29.000"	"0.322749425586953"	"29"	"0.001348"	"0.01103"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.3659"	"0.0000"	"1"	"1"	"1"	"683.88403"	"1366.76079"	"1366.76185"	"-0.78"	"-0.00053"	"14/64"	"14"	"64"	"2320809.64654541"	"HCD"	"MS2"	"35.56675"	"176.9"	"100.000"	"60.7847"	"19701"	"19701"	"19679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"318.0"	""	"230.7"	""	"256.2"	""	"282.7"	""	"289.9"	"297.5"	""	"916"	"41"	"36.000"	"29.000"	"0.00383588411214112"	""	"0.0001686"	"0.001061"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"456.25845"	"1366.76081"	"1366.76185"	"-0.77"	"-0.00035"	"5/64"	"5"	"64"	"1698393.12597656"	"HCD"	"MS2"	"0"	"75.4"	"100.000"	"60.9711"	"19777"	"19777"	"19757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.4"	""	"102.3"	""	"103.8"	""	"127.4"	"0.9"	"123.0"	"130.8"	""	"916"	"26"	"36.000"	"29.000"	"0.123556466005977"	"26"	"0.003208"	"0.03463"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.2791"	"0.0000"	"1"	"1"	"1"	"683.88409"	"1366.76091"	"1366.76185"	"-0.69"	"-0.00047"	"14/64"	"14"	"64"	"4971206.50262451"	"HCD"	"MS2"	"7.590033"	"386.8"	"100.000"	"60.9183"	"19788"	"19788"	"19771"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"659.0"	""	"519.3"	""	"566.8"	""	"606.4"	""	"636.3"	"673.1"	""	"911"	"43"	"36.000"	"29.000"	"0.00221558482192461"	""	"0.0001991"	"0.002165"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"3"	"3"	"0.2963"	"0.0000"	"1"	"1"	"1"	"456.25861"	"1366.76126"	"1366.76185"	"-0.43"	"-0.00020"	"5/64"	"5"	"64"	"1609093.14697266"	"HCD"	"MS2"	"11.02941"	"72.8"	"100.000"	"60.8306"	"19752"	"19752"	"19730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.7"	""	"96.4"	""	"109.3"	""	"117.4"	"2.3"	"129.9"	"122.7"	""	"911"	"27"	"36.000"	"29.000"	"0.086793735703226"	""	"0.001488"	"0.01239"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADEFVEK"	"[K].aADEFVEk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.3171"	"0.0000"	"1"	"1"	"1"	"683.88434"	"1366.76140"	"1366.76185"	"-0.33"	"-0.00023"	"14/64"	"14"	"64"	"4769630.91937256"	"HCD"	"MS2"	"7.877574"	"379.6"	"100.000"	"61.0770"	"19820"	"19820"	"19802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"635.1"	""	"476.0"	"3.4"	"556.7"	""	"606.4"	"1.8"	"622.2"	"689.6"	""	"911"	"41"	"36.000"	"29.000"	"0.00333033852526697"	""	"0.0001686"	"0.001452"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELDFQK"	"[K].eELDFQk.[N]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.3462"	"0.0000"	"1"	"1"	"1"	"683.88458"	"1366.76189"	"1366.76185"	"0.03"	"0.00002"	"6/56"	"6"	"56"	"635984.472167969"	"HCD"	"MS2"	"6.190655"	"57.3"	"100.000"	"73.6909"	"24936"	"24936"	"24918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"36.9"	""	"33.0"	""	"102.5"	""	"174.8"	"169.4"	""	"975"	"26"	"36.000"	"29.000"	"0.124157974813521"	""	"0.001348"	"0.01102"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATMELEK"	"[K].sATMELEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.2286"	"0.0000"	"1"	"1"	"1"	"683.88464"	"1366.76201"	"1366.76522"	"-2.35"	"-0.00161"	"12/68"	"12"	"68"	"626172.485046387"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"56.0164"	"17766"	"17766"	"17750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.6"	""	"80.2"	""	"82.6"	""	"75.0"	"0.2"	"129.9"	"140.8"	""	"975"	"35"	"36.000"	"29.000"	"0.0159578588753434"	""	"9.9E-05"	"0.0006154"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATMELEK"	"[K].sATMELEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"683.88586"	"1366.76445"	"1366.76522"	"-0.56"	"-0.00039"	"7/68"	"7"	"68"	"576466.27722168"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"55.7079"	"17675"	"17675"	"17660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.9"	""	"80.5"	""	"70.1"	""	"66.0"	""	"103.7"	"124.1"	""	"959"	"18"	"36.000"	"29.000"	"0.754724783511551"	"22"	"0.0009352"	"0.008132"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SATMELEK"	"[K].sATMELEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"683.88635"	"1366.76543"	"1366.76522"	"0.15"	"0.00010"	"5/68"	"5"	"68"	"412878.45111084"	"HCD"	"MS2"	"32.23656"	"42.6"	"100.000"	"56.0424"	"17808"	"17808"	"17787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.8"	""	"52.6"	""	"54.6"	""	"58.3"	"0.0"	"91.1"	"88.2"	""	"953"	"24"	"36.000"	"29.000"	"0.207044121817754"	""	"0.0001991"	"0.0033"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"683.88971"	"1366.77214"	"1366.77309"	"-0.69"	"-0.00047"	"7/70"	"7"	"70"	"560417.707763672"	"HCD"	"MS2"	"13.29616"	"53.2"	"100.000"	"52.4224"	"16336"	"16336"	"16310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.4"	""	"60.7"	""	"65.3"	""	"96.6"	""	"100.7"	"102.9"	""	"898"	"41"	"36.000"	"29.000"	"0.00329796726802544"	"25"	"0"	"5.164E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"683.88977"	"1366.77226"	"1366.77309"	"-0.60"	"-0.00041"	"7/70"	"7"	"70"	"685283.537109375"	"HCD"	"MS2"	"20.92105"	"65.4"	"100.000"	"52.7262"	"16426"	"16426"	"16401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.1"	""	"76.0"	""	"86.6"	""	"114.0"	""	"131.7"	"125.1"	""	"884"	"42"	"36.000"	"29.000"	"0.00288683704270183"	"27"	"0"	"2.85E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"683.88989"	"1366.77251"	"1366.77309"	"-0.42"	"-0.00029"	"8/70"	"8"	"70"	"6610184.3770752"	"HCD"	"MS2"	"0"	"521.6"	"100.000"	"52.0977"	"16204"	"16204"	"16187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"723.1"	""	"632.9"	""	"726.7"	""	"920.9"	""	"933.0"	"1015.7"	""	"883"	"45"	"36.000"	"29.000"	"0.00142538015473613"	""	"0"	"0.0003058"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"683.88995"	"1366.77263"	"1366.77309"	"-0.33"	"-0.00023"	"8/70"	"8"	"70"	"3150719.29278564"	"HCD"	"MS2"	"5.789956"	"254.8"	"100.000"	"51.8002"	"16082"	"16082"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"401.6"	""	"337.9"	""	"336.4"	""	"464.2"	""	"424.1"	"447.2"	""	"885"	"46"	"36.000"	"29.000"	"0.00113740013387522"	""	"0"	"8.425E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"683.89020"	"1366.77312"	"1366.77309"	"0.02"	"0.00002"	"8/70"	"8"	"70"	"7709949.20874023"	"HCD"	"MS2"	"0.3309251"	"590.2"	"100.000"	"52.3577"	"16276"	"16276"	"16259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"851.8"	""	"706.6"	""	"840.8"	""	"1062.5"	""	"1066.8"	"1068.1"	""	"909"	"46"	"36.000"	"29.000"	"0.00112858399635684"	""	"0"	"0.0001677"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEFSGANK"	"[K].vGEFSGANk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"P11232"	"Thioredoxin OS=Rattus norvegicus OX=10116 GN=Txn PE=1 SV=2"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"683.89032"	"1366.77336"	"1366.77309"	"0.20"	"0.00014"	"8/70"	"8"	"70"	"1418937.82830811"	"HCD"	"MS2"	"18.22112"	"127.4"	"100.000"	"52.0696"	"16158"	"16158"	"16132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.8"	""	"170.4"	""	"164.1"	""	"235.6"	""	"200.4"	"234.0"	""	"909"	"41"	"36.000"	"29.000"	"0.00348765796914947"	"29"	"0"	"8.742E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"684.34393"	"1367.68059"	"1367.67930"	"0.95"	"0.00065"	"8/74"	"8"	"74"	"725562.92401123"	"HCD"	"MS2"	"22.45419"	"40.8"	"100.000"	"75.2843"	"25613"	"25613"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.5"	""	"48.2"	""	"57.2"	""	"72.9"	""	"70.0"	"77.6"	""	"570"	"27"	"34.000"	"27.000"	"0.0571274527799071"	"18"	"0"	"0.0001882"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEWDVAEAR"	"[K].yEWDVAEAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"684.34436"	"1367.68144"	"1367.67930"	"1.57"	"0.00107"	"7/74"	"7"	"74"	"856147.841003418"	"HCD"	"MS2"	"24.60176"	"51.6"	"100.000"	"75.1865"	"25542"	"25542"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.1"	""	"57.4"	""	"68.8"	""	"90.5"	"0.0"	"98.0"	"93.4"	""	"577"	"39"	"34.000"	"27.000"	"0.00332771264881385"	"22"	"0"	"7.045E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.34979"	"1367.69231"	"1367.69390"	"-1.16"	"-0.00080"	"8/82"	"8"	"82"	"3339282.03009033"	"HCD"	"MS2"	"32.48959"	"188.9"	"100.000"	"51.4003"	"15887"	"15887"	"15869"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"315.0"	""	"260.2"	""	"268.6"	""	"280.0"	""	"320.9"	"345.6"	""	"623"	"35"	"34.000"	"27.000"	"0.00934239124664654"	"15"	"0"	"5.926E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"684.34998"	"1367.69267"	"1367.69390"	"-0.90"	"-0.00061"	"9/82"	"9"	"82"	"1495941.2947998"	"HCD"	"MS2"	"5.452669"	"89.5"	"100.000"	"51.3133"	"15888"	"15888"	"15873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.7"	""	"129.0"	""	"143.1"	""	"119.9"	""	"150.5"	"156.7"	""	"626"	"44"	"34.000"	"27.000"	"0.0011845252901645"	"19"	"0"	"1.014E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"684.35004"	"1367.69280"	"1367.69390"	"-0.81"	"-0.00055"	"8/82"	"8"	"82"	"805369.232116699"	"HCD"	"MS2"	"10.17861"	"53.6"	"100.000"	"51.7119"	"16013"	"16013"	"15994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.3"	""	"72.3"	""	"81.4"	""	"70.5"	""	"83.7"	"105.8"	""	"625"	"38"	"34.000"	"27.000"	"0.00523419648758262"	"21"	"0"	"0.0001315"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGMQLQGYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"684.35065"	"1367.69402"	"1367.69390"	"0.09"	"0.00006"	"8/82"	"8"	"82"	"3289193.87420654"	"HCD"	"MS2"	"39.22222"	"179.0"	"100.000"	"51.0224"	"15770"	"15770"	"15750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"304.7"	""	"246.8"	""	"256.3"	""	"274.5"	""	"296.9"	"313.9"	""	"627"	"36"	"34.000"	"27.000"	"0.0076249595684464"	"19"	"0"	"3.571E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"684.36230"	"1367.71733"	"1367.72072"	"-2.47"	"-0.00169"	"7/68"	"7"	"68"	"1013395.20953369"	"HCD"	"MS2"	"0"	"100.2"	"100.000"	"44.5859"	"13124"	"13124"	"13106"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.4"	""	"113.7"	""	"129.3"	""	"150.2"	""	"185.3"	"184.0"	""	"779"	"27"	"35.000"	"28.000"	"0.0728630693672478"	""	"0.0001991"	"0.002704"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"684.36371"	"1367.72014"	"1367.72072"	"-0.42"	"-0.00029"	"7/68"	"7"	"68"	"1009457.99151611"	"HCD"	"MS2"	"32.67527"	"98.8"	"100.000"	"44.0771"	"12953"	"12953"	"12922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.8"	""	"115.9"	""	"130.5"	""	"170.1"	"2.5"	"186.3"	"179.8"	""	"764"	"28"	"35.000"	"28.000"	"0.063250412604536"	"17"	"0.0001686"	"0.001818"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"684.36395"	"1367.72063"	"1367.72072"	"-0.06"	"-0.00004"	"7/68"	"7"	"68"	"1115113.79937744"	"HCD"	"MS2"	"17.05917"	"112.0"	"100.000"	"44.3662"	"13070"	"13070"	"13053"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.9"	""	"127.6"	""	"143.8"	""	"167.9"	""	"219.3"	"213.3"	""	"767"	"25"	"35.000"	"28.000"	"0.13451334366081"	"18"	"0.0001686"	"0.001948"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGETWDSK"	"[R].sGETWDSk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"O55096"	"Dipeptidyl peptidase 3 OS=Rattus norvegicus OX=10116 GN=Dpp3 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"684.36444"	"1367.72161"	"1367.72072"	"0.65"	"0.00044"	"7/68"	"7"	"68"	"838867.223571777"	"HCD"	"MS2"	"15.89414"	"85.4"	"100.000"	"44.2533"	"12989"	"12989"	"12961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"98.9"	""	"114.7"	""	"124.4"	""	"151.4"	"175.7"	""	"793"	"26"	"35.000"	"28.000"	"0.107955106865289"	"16"	"0.0001686"	"0.001214"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASDMIDK"	"[K].nASDmIDk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"684.36450"	"1367.72173"	"1367.72409"	"-1.73"	"-0.00118"	"11/78"	"11"	"78"	"904334.825134277"	"HCD"	"MS2"	"0"	"63.8"	"100.000"	"35.5116"	"9442"	"9442"	"9422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.2"	""	"60.1"	""	"61.7"	""	"165.9"	""	"130.5"	"129.2"	""	"793"	"28"	"35.000"	"28.000"	"0.0656512790515668"	"20"	"0.005832"	"0.07211"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NASDMIDK"	"[K].nASDmIDk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"684.36469"	"1367.72209"	"1367.72409"	"-1.46"	"-0.00100"	"11/78"	"11"	"78"	"909606.877319336"	"HCD"	"MS2"	"0"	"66.3"	"100.000"	"35.4678"	"9462"	"9462"	"9435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.3"	""	"51.2"	""	"64.0"	""	"187.8"	"0.0"	"146.3"	"129.5"	""	"794"	"33"	"35.000"	"28.000"	"0.0203605969444572"	"22"	"0.005832"	"0.07191"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37122"	"1367.73516"	"1367.73681"	"-1.21"	"-0.00083"	"7/78"	"7"	"78"	"748219.840637207"	"HCD"	"MS2"	"15.62929"	"36.7"	"100.000"	"69.7829"	"23350"	"23350"	"23328"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.0"	""	"48.8"	""	"52.8"	""	"59.1"	""	"62.1"	"75.3"	""	"845"	"42"	"36.000"	"29.000"	"0.00252828898912985"	"15"	"0"	"0.0001054"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37122"	"1367.73516"	"1367.73681"	"-1.21"	"-0.00083"	"7/78"	"7"	"78"	"876057.136352539"	"HCD"	"MS2"	"18.44123"	"42.8"	"100.000"	"69.8583"	"23415"	"23415"	"23388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.2"	""	"59.5"	""	"57.4"	""	"65.6"	""	"75.0"	"94.3"	""	"845"	"42"	"36.000"	"29.000"	"0.00258123005522604"	"15"	"0"	"0.0001333"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"684.37158"	"1367.73589"	"1367.73681"	"-0.68"	"-0.00046"	"7/78"	"7"	"78"	"2632777.31311035"	"HCD"	"MS2"	"0.9755667"	"109.4"	"100.000"	"70.1513"	"23534"	"23534"	"23520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.6"	""	"169.2"	""	"149.1"	""	"112.0"	""	"207.3"	"250.5"	""	"840"	"45"	"36.000"	"29.000"	"0.00120018802821748"	"16"	"0"	"5.181E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37164"	"1367.73601"	"1367.73681"	"-0.59"	"-0.00040"	"7/78"	"7"	"78"	"828823.788757324"	"HCD"	"MS2"	"9.648653"	"47.6"	"100.000"	"70.4345"	"23648"	"23648"	"23632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.9"	""	"62.9"	""	"61.7"	""	"67.6"	"1.9"	"91.3"	"101.5"	""	"851"	"43"	"36.000"	"29.000"	"0.00238725913801816"	"15"	"0"	"0.0002729"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.37183"	"1367.73638"	"1367.73681"	"-0.32"	"-0.00022"	"7/78"	"7"	"78"	"848108.468688965"	"HCD"	"MS2"	"12.77764"	"44.1"	"100.000"	"70.3614"	"23585"	"23585"	"23566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.0"	""	"55.3"	""	"50.9"	""	"69.5"	""	"83.9"	"103.4"	""	"851"	"43"	"36.000"	"29.000"	"0.00213255167908404"	"15"	"0"	"4.768E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLVSSEDYGR"	"[K].lLVSSEDYGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"684.37274"	"1367.73821"	"1367.73681"	"1.02"	"0.00070"	"7/78"	"7"	"78"	"2610995.22210693"	"HCD"	"MS2"	"0.9227422"	"111.6"	"100.000"	"70.0644"	"23465"	"23465"	"23448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.4"	""	"163.4"	""	"143.2"	""	"128.4"	""	"197.1"	"269.5"	""	"854"	"45"	"36.000"	"29.000"	"0.0012486130653391"	"19"	"0"	"1.451E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPQAMK"	"[K].gDYPQAMk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"684.37311"	"1367.73894"	"1367.73934"	"-0.30"	"-0.00020"	"11/62"	"11"	"62"	"1181223.14294434"	"HCD"	"MS2"	"8.89327"	"114.8"	"100.000"	"48.1113"	"14551"	"14551"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.0"	""	"142.6"	""	"162.1"	""	"135.8"	"3.7"	"218.4"	"230.8"	""	"842"	"22"	"36.000"	"29.000"	"0.286603900010065"	"24"	"0.0001991"	"0.004109"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPQAMK"	"[K].gDYPQAMk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"684.37335"	"1367.73943"	"1367.73934"	"0.06"	"0.00004"	"7/62"	"7"	"62"	"2253896.72253418"	"HCD"	"MS2"	"47.83408"	"201.7"	"100.000"	"47.7223"	"14430"	"14430"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"345.7"	""	"271.5"	""	"264.6"	""	"245.1"	"3.9"	"377.9"	"402.6"	""	"832"	"27"	"36.000"	"29.000"	"0.0851320968877464"	"29"	"0.0001991"	"0.004245"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"684.38123"	"1367.75517"	"1367.75710"	"-1.41"	"-0.00096"	"7/62"	"7"	"62"	"579003.764831543"	"HCD"	"MS2"	"20.91063"	"51.7"	"100.000"	"48.8809"	"14899"	"14899"	"14877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.2"	"1.9"	"41.3"	""	"65.7"	""	"84.0"	""	"115.2"	"121.6"	""	"762"	"24"	"35.000"	"28.000"	"0.165930023874202"	"15"	"0.0001686"	"0.001206"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPQAMK"	"[K].gDYPQAMk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.4074"	"0.0000"	"1"	"1"	"1"	"684.38141"	"1367.75554"	"1367.73934"	"11.84"	"0.00810"	"7/62"	"7"	"62"	"3032838.48101807"	"HCD"	"MS2"	"0"	"281.5"	"100.000"	"47.6413"	"14397"	"14397"	"14379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"484.3"	""	"364.1"	""	"397.7"	""	"357.8"	""	"524.4"	"541.2"	""	"764"	"27"	"35.000"	"28.000"	"0.0820471241117864"	""	"0.003786"	"0.04098"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPQAMK"	"[K].gDYPQAMk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"684.38159"	"1367.75591"	"1367.73934"	"12.11"	"0.00828"	"6/62"	"6"	"62"	"2489837.70697021"	"HCD"	"MS2"	"46.59523"	"226.1"	"100.000"	"48.0193"	"14513"	"14513"	"14493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"395.1"	""	"289.6"	""	"293.0"	""	"276.2"	""	"424.4"	"466.8"	""	"766"	"18"	"35.000"	"28.000"	"0.583712204704362"	"28"	"0.00296"	"0.03194"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"684.38177"	"1367.75627"	"1367.75710"	"-0.61"	"-0.00041"	"7/62"	"7"	"62"	"2034713.6852417"	"HCD"	"MS2"	"5.905862"	"167.2"	"100.000"	"48.9243"	"14882"	"14882"	"14863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"265.4"	"2.1"	"153.7"	""	"167.1"	""	"279.6"	""	"344.7"	"378.2"	""	"762"	"42"	"35.000"	"28.000"	"0.00261773075645422"	"27"	"9.9E-05"	"0.001002"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDEAAFQK"	"[R].tDEAAFQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"684.38177"	"1367.75627"	"1367.75710"	"-0.61"	"-0.00041"	"7/62"	"7"	"62"	"2034732.94689941"	"HCD"	"MS2"	"5.391498"	"170.6"	"100.000"	"48.5575"	"14769"	"14769"	"14750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"270.3"	""	"168.4"	""	"162.6"	""	"283.8"	""	"353.4"	"383.5"	""	"762"	"39"	"35.000"	"28.000"	"0.00433435995898728"	"27"	"0.0001686"	"0.001443"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGNDAYK"	"[K].eLGNDAYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"684.38257"	"1367.75786"	"1367.75710"	"0.55"	"0.00038"	"5/72"	"5"	"72"	"477502.319458008"	"HCD"	"MS2"	"42.60529"	"44.3"	"100.000"	"47.3399"	"14275"	"14275"	"14257"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.0"	""	"59.6"	""	"55.4"	""	"56.4"	"1.3"	"75.1"	"94.5"	""	"780"	"22"	"35.000"	"28.000"	"0.237719389923666"	"16"	"0.0001991"	"0.005877"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGNDAYK"	"[K].eLGNDAYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"684.38293"	"1367.75859"	"1367.75710"	"1.09"	"0.00075"	"10/72"	"10"	"72"	"878155.632995605"	"HCD"	"MS2"	"25.34948"	"84.2"	"100.000"	"47.7081"	"14387"	"14387"	"14361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.8"	""	"117.7"	""	"100.2"	""	"109.4"	"0.6"	"154.2"	"160.0"	""	"780"	"19"	"35.000"	"28.000"	"0.537111692868639"	"16"	"0.0001991"	"0.003519"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEGALETLLR"	"[K].hEGALETLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"456.59955"	"1367.78409"	"1367.78443"	"-0.25"	"-0.00011"	"7/82"	"7"	"82"	"834293.275939941"	"HCD"	"MS2"	"59.07102"	"19.2"	"100.000"	"62.3802"	"20346"	"20346"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"26.7"	""	"26.0"	""	"27.2"	""	"41.6"	"40.7"	""	"674"	"45"	"35.000"	"28.000"	"0.000963008013117358"	"20"	"0"	"2.169E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEGALETLLR"	"[K].hEGALETLLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"456.59961"	"1367.78427"	"1367.78443"	"-0.11"	"-0.00005"	"11/82"	"11"	"82"	"785875.911499023"	"HCD"	"MS2"	"18.71978"	"19.7"	"100.000"	"62.3212"	"20355"	"20355"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.7"	""	"18.8"	""	"26.7"	""	"35.1"	""	"42.7"	"43.6"	""	"670"	"42"	"35.000"	"28.000"	"0.001986299837343"	"24"	"0"	"6.322E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPDITGHK"	"[K].aAPDITGHk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"456.60550"	"1367.80194"	"1367.80472"	"-2.03"	"-0.00093"	"6/68"	"6"	"68"	"4388259.53039551"	"HCD"	"MS2"	"27.86699"	"192.3"	"100.000"	"36.1197"	"9727"	"9727"	"9706"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.7"	""	"227.6"	""	"216.6"	""	"355.8"	""	"428.7"	"403.3"	""	"548"	"26"	"34.000"	"27.000"	"0.0725689037978236"	"23"	"0"	"9.802E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPDITGHK"	"[K].aAPDITGHk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"P97546"	"Neuroplastin OS=Rattus norvegicus OX=10116 GN=Nptn PE=1 SV=2"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"456.60602"	"1367.80350"	"1367.80472"	"-0.89"	"-0.00041"	"6/68"	"6"	"68"	"5099510.24084473"	"HCD"	"MS2"	"3.817462"	"206.6"	"100.000"	"36.2752"	"9752"	"9752"	"9735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.9"	""	"238.2"	""	"261.5"	""	"377.3"	""	"469.6"	"440.5"	""	"592"	"25"	"34.000"	"27.000"	"0.095563426002694"	"17"	"0"	"0.0002518"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"684.85248"	"1368.69768"	"1368.69970"	"-1.47"	"-0.00101"	"6/68"	"6"	"68"	"1013589.89904785"	"HCD"	"MS2"	"19.26221"	"63.1"	"100.000"	"56.9870"	"18189"	"18189"	"18166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.9"	""	"82.7"	""	"93.5"	""	"98.9"	"0.3"	"115.4"	"123.5"	""	"593"	"29"	"34.000"	"27.000"	"0.0352390910435076"	"19"	"0.0009352"	"0.008357"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"684.85284"	"1368.69841"	"1368.69970"	"-0.94"	"-0.00064"	"7/68"	"7"	"68"	"2155812.23358154"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"57.2882"	"18311"	"18311"	"18295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.8"	""	"132.7"	""	"150.8"	""	"156.5"	""	"171.8"	"170.8"	""	"599"	"33"	"34.000"	"27.000"	"0.0147365840936595"	"23"	"0"	"0.0003309"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"684.85297"	"1368.69866"	"1368.69970"	"-0.76"	"-0.00052"	"7/68"	"7"	"68"	"2413123.58270264"	"HCD"	"MS2"	"0"	"112.0"	"100.000"	"57.5047"	"18364"	"18364"	"18346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.4"	""	"146.6"	""	"168.8"	""	"170.7"	""	"222.9"	"196.7"	""	"600"	"33"	"34.000"	"27.000"	"0.0166005032764721"	"22"	"0"	"0.0003604"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"684.85303"	"1368.69878"	"1368.69970"	"-0.67"	"-0.00046"	"9/68"	"9"	"68"	"371299.125915527"	"HCD"	"MS2"	"9.447633"	"30.5"	"100.000"	"57.8198"	"18493"	"18493"	"18470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.2"	""	"46.2"	""	"31.7"	""	"47.2"	"0.5"	"61.6"	"62.2"	""	"600"	"21"	"34.000"	"27.000"	"0.236658035285566"	"23"	"0.003529"	"0.03899"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYPTEDVPR"	"[R].yYPTEDVPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"684.85303"	"1368.69878"	"1368.69970"	"-0.67"	"-0.00046"	"11/68"	"11"	"68"	"636428.927185059"	"HCD"	"MS2"	"41.31721"	"48.7"	"100.000"	"57.2128"	"18246"	"18246"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.4"	""	"61.7"	""	"74.6"	""	"72.3"	"0.7"	"94.9"	"86.9"	""	"600"	"24"	"34.000"	"27.000"	"0.106935340027873"	"24"	"0.0001991"	"0.003251"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDFGAAFVER"	"[R].aGDFGAAFVER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"P97608"	"5-oxoprolinase OS=Rattus norvegicus OX=10116 GN=Oplah PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"684.85870"	"1368.71013"	"1368.71093"	"-0.58"	"-0.00040"	"7/94"	"7"	"94"	"517279.607116699"	"HCD"	"MS2"	"49.4719"	"22.6"	"100.000"	"86.3560"	"30092"	"30092"	"30071"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.5"	""	"28.7"	""	"31.0"	""	"36.9"	""	"42.9"	"36.4"	""	"656"	"25"	"35.000"	"28.000"	"0.113207146502161"	"21"	"0.001348"	"0.01105"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADDFIDK"	"[K].sADDFIDk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"684.87390"	"1368.74053"	"1368.74112"	"-0.43"	"-0.00030"	"7/68"	"7"	"68"	"803967.235168457"	"HCD"	"MS2"	"0"	"75.8"	"100.000"	"72.4249"	"24450"	"24450"	"24432"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.9"	""	"80.9"	""	"93.8"	""	"120.1"	""	"167.4"	"166.4"	""	"723"	"42"	"35.000"	"28.000"	"0.00230201580808212"	"27"	"0"	"0.0002333"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SADDFIDK"	"[K].sADDFIDk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"684.87402"	"1368.74077"	"1368.74112"	"-0.25"	"-0.00017"	"12/68"	"12"	"68"	"713309.239257813"	"HCD"	"MS2"	"0"	"66.6"	"100.000"	"72.3819"	"24403"	"24403"	"24384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.6"	""	"77.2"	""	"72.9"	""	"102.7"	""	"147.4"	"146.0"	""	"724"	"33"	"35.000"	"28.000"	"0.017088682093742"	"22"	"9.9E-05"	"0.0004998"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVIEDHSNR"	"[K].lGVIEDHSNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9531"	"0.0000"	"1"	"1"	"1"	"456.91891"	"1368.74219"	"1368.74329"	"-0.81"	"-0.00037"	"8/80"	"8"	"80"	"9779074.88165283"	"HCD"	"MS2"	"5.199941"	"149.1"	"93.113"	"40.5615"	"11524"	"11524"	"11509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.8"	""	"170.9"	""	"203.3"	""	"251.2"	"12.6"	"276.5"	"268.3"	""	"750"	"64"	"35.000"	"28.000"	"1.58500730349601E-05"	"19"	"0"	"1.332E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVIEDHSNR"	"[K].lGVIEDHSNR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"456.91916"	"1368.74292"	"1368.74329"	"-0.27"	"-0.00012"	"8/80"	"8"	"80"	"9923741.13555908"	"HCD"	"MS2"	"7.269582"	"133.0"	"84.371"	"40.6158"	"11511"	"11511"	"11495"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.4"	""	"155.5"	""	"172.6"	""	"225.8"	"7.2"	"243.8"	"233.5"	""	"755"	"66"	"35.000"	"28.000"	"8.74816480363101E-06"	"20"	"0"	"6.495E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].emPSVFGk.[ED]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"456.92398"	"1368.75739"	"1368.75974"	"-1.72"	"-0.00079"	"8/62"	"8"	"62"	"1191478.0949707"	"HCD"	"MS2"	"63.60873"	"44.0"	"100.000"	"63.2048"	"20682"	"20682"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"51.1"	""	"51.7"	""	"101.1"	"1.0"	"83.0"	"83.4"	""	"782"	"16"	"35.000"	"28.000"	"1.05239010833542"	"18"	"0.0007633"	"0.00751"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMPSVFGK"	"[K].emPSVFGk.[ED]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"2"	"2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q4V8H8; Q8R491"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.88281"	"1368.75835"	"1368.75974"	"-1.02"	"-0.00070"	"7/62"	"7"	"62"	"897794.24987793"	"HCD"	"MS2"	"20.29193"	"61.4"	"100.000"	"62.9847"	"20624"	"20624"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"70.1"	""	"66.9"	""	"181.0"	""	"97.8"	"107.7"	""	"779"	"27"	"35.000"	"28.000"	"0.0757717751792026"	"14"	"0.006845"	"0.08576"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIFATSK"	"[R].dEIFATSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"684.89185"	"1368.77641"	"1368.77750"	"-0.79"	"-0.00054"	"7/68"	"7"	"68"	"335761.354492188"	"HCD"	"MS2"	"24.21418"	"26.2"	"100.000"	"70.8653"	"23822"	"23822"	"23805"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"16.6"	""	"16.4"	""	"61.8"	""	"82.1"	"55.4"	""	"673"	"39"	"35.000"	"28.000"	"0.00473134991869716"	"24"	"0"	"0.0003612"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIFATSK"	"[R].dEIFATSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"684.89197"	"1368.77666"	"1368.77750"	"-0.62"	"-0.00042"	"9/68"	"9"	"68"	"192042.255859375"	"HCD"	"MS2"	"34.09352"	"18.6"	"100.000"	"70.9050"	"23806"	"23806"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"17.5"	""	"20.6"	""	"37.7"	""	"46.7"	"36.6"	""	"674"	"13"	"35.000"	"28.000"	"1.59451974270019"	"19"	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIFATSK"	"[R].dEIFATSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"684.89209"	"1368.77690"	"1368.77750"	"-0.44"	"-0.00030"	"7/68"	"7"	"68"	"695081.9765625"	"HCD"	"MS2"	"28.6353"	"57.7"	"100.000"	"70.5067"	"23644"	"23644"	"23623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"41.8"	""	"40.2"	""	"146.9"	"1.3"	"161.1"	"128.2"	""	"668"	"31"	"35.000"	"28.000"	"0.0249888613170726"	"23"	"9.9E-05"	"0.0009247"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIFATSK"	"[R].dEIFATSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"684.89215"	"1368.77703"	"1368.77750"	"-0.35"	"-0.00024"	"7/68"	"7"	"68"	"643706.763427734"	"HCD"	"MS2"	"38.34808"	"56.2"	"100.000"	"70.5728"	"23704"	"23704"	"23689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.7"	""	"34.2"	""	"37.5"	""	"154.9"	""	"170.1"	"113.6"	""	"668"	"40"	"35.000"	"28.000"	"0.00335541673952985"	"26"	"9.9E-05"	"0.0005578"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYAEELAK"	"[K].sYAEELAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"684.89215"	"1368.77703"	"1368.77750"	"-0.35"	"-0.00024"	"14/64"	"14"	"64"	"1521636.91174316"	"HCD"	"MS2"	"0"	"131.9"	"100.000"	"61.3489"	"19962"	"19962"	"19946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.8"	""	"153.6"	""	"185.4"	""	"220.8"	""	"250.4"	"254.9"	""	"668"	"45"	"35.000"	"28.000"	"0.00112394864171414"	"28"	"0.0001686"	"0.001031"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEMSTSK"	"[K].iVEmSTSk.[T]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.89264"	"1368.77800"	"1368.78087"	"-2.10"	"-0.00144"	"7/64"	"7"	"64"	"1621553.73162842"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"41.1553"	"11731"	"11731"	"11712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.8"	""	"122.8"	""	"133.6"	""	"260.6"	"0.6"	"154.8"	"138.0"	""	"694"	"27"	"35.000"	"28.000"	"0.0650623094299395"	"14"	"0.002525"	"0.02473"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYAEELAK"	"[K].sYAEELAk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"Q6P7R8"	"Very-long-chain 3-oxoacyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Hsd17b12 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"684.89282"	"1368.77837"	"1368.77750"	"0.63"	"0.00043"	"14/64"	"14"	"64"	"631534.051879883"	"HCD"	"MS2"	"14.55238"	"60.3"	"100.000"	"61.6380"	"20045"	"20045"	"20021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.0"	""	"71.3"	""	"83.8"	""	"93.5"	"0.1"	"115.5"	"117.3"	""	"670"	"44"	"35.000"	"28.000"	"0.00138052668897605"	""	"0"	"0.000377"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEMSTSK"	"[K].iVEmSTSk.[T]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.89331"	"1368.77934"	"1368.78087"	"-1.12"	"-0.00076"	"7/64"	"7"	"64"	"721217.723571777"	"HCD"	"MS2"	"10.60319"	"54.1"	"100.000"	"40.9156"	"11669"	"11669"	"11640"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.1"	""	"65.2"	""	"69.4"	""	"128.0"	""	"106.5"	"86.8"	""	"671"	"22"	"35.000"	"28.000"	"0.224746286459245"	"14"	"0.008485"	"0.1077"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEMSTSK"	"[K].iVEmSTSk.[T]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"684.89349"	"1368.77971"	"1368.78087"	"-0.85"	"-0.00058"	"7/64"	"7"	"64"	"1768903.76141357"	"HCD"	"MS2"	"20.79856"	"112.8"	"100.000"	"40.8455"	"11605"	"11605"	"11580"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.8"	""	"122.1"	""	"148.3"	""	"285.1"	""	"204.2"	"187.1"	""	"656"	"25"	"35.000"	"28.000"	"0.0937289698226983"	"16"	"0.004998"	"0.06351"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEMSTSK"	"[K].iVEmSTSk.[T]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.89386"	"1368.78044"	"1368.78087"	"-0.31"	"-0.00022"	"7/64"	"7"	"64"	"711895.345153809"	"HCD"	"MS2"	"0"	"47.3"	"100.000"	"41.2297"	"11795"	"11795"	"11766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.2"	""	"50.5"	""	"70.1"	""	"118.9"	"0.4"	"74.8"	"83.9"	""	"671"	"29"	"35.000"	"28.000"	"0.0447396440490795"	"14"	"0.002525"	"0.02416"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAETVAPAVR"	"[K].lLAETVAPAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"684.92426"	"1368.84123"	"1368.84122"	"0.01"	"0.00001"	"7/82"	"7"	"82"	"172566.019592285"	"HCD"	"MS2"	"20.26311"	"9.7"	"100.000"	"89.5879"	"31394"	"31394"	"31373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"9.2"	""	"13.2"	""	"21.9"	""	"18.2"	"23.8"	""	"296"	"50"	"31.000"	"24.000"	"0.000136855329742857"	"22"	"0"	"4.888E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLAETVAPAVR"	"[K].lLAETVAPAVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"684.92444"	"1368.84160"	"1368.84122"	"0.28"	"0.00019"	"6/82"	"6"	"82"	"173722.080566406"	"HCD"	"MS2"	"53.28166"	"10.1"	"100.000"	"89.6303"	"31371"	"31371"	"31352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"12.4"	""	"12.0"	""	"19.0"	""	"19.9"	"20.4"	""	"290"	"25"	"31.000"	"24.000"	"0.0418184567953358"	"20"	"0.0001991"	"0.004412"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEDAVQFIR"	"[K].yEDAVQFIR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q78EG7"	"Protein tyrosine phosphatase type IVA 1 OS=Rattus norvegicus OX=10116 GN=Ptp4a1 PE=1 SV=1"	"Q6P9X4; Q78EG7"	"Protein tyrosine phosphatase type IVA 2 OS=Rattus norvegicus OX=10116 GN=Ptp4a2 PE=2 SV=1; Protein tyrosine phosphatase type IVA 1 OS=Rattus norvegicus OX=10116 GN=Ptp4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"685.36896"	"1369.73064"	"1369.73133"	"-0.51"	"-0.00035"	"8/72"	"8"	"72"	"391016.93939209"	"HCD"	"MS2"	"33.8051"	"22.7"	"100.000"	"95.4544"	"33757"	"33757"	"33736"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.5"	""	"30.8"	""	"33.1"	""	"38.5"	""	"34.5"	"38.8"	""	"654"	"32"	"35.000"	"28.000"	"0.0215054112815222"	"22"	"0"	"0.000317"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEDAVQFIR"	"[K].yEDAVQFIR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q78EG7"	"Protein tyrosine phosphatase type IVA 1 OS=Rattus norvegicus OX=10116 GN=Ptp4a1 PE=1 SV=1"	"Q6P9X4; Q78EG7"	"Protein tyrosine phosphatase type IVA 2 OS=Rattus norvegicus OX=10116 GN=Ptp4a2 PE=2 SV=1; Protein tyrosine phosphatase type IVA 1 OS=Rattus norvegicus OX=10116 GN=Ptp4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"685.36920"	"1369.73113"	"1369.73133"	"-0.15"	"-0.00010"	"7/72"	"7"	"72"	"306787.017456055"	"HCD"	"MS2"	"10.1093"	"19.3"	"100.000"	"95.7589"	"33880"	"33880"	"33864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.0"	""	"26.7"	""	"27.7"	""	"24.6"	"0.6"	"34.5"	"40.0"	""	"670"	"29"	"35.000"	"28.000"	"0.0389085285636514"	"28"	"0.0001686"	"0.00147"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEDAVQFIR"	"[K].yEDAVQFIR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q78EG7"	"Protein tyrosine phosphatase type IVA 1 OS=Rattus norvegicus OX=10116 GN=Ptp4a1 PE=1 SV=1"	"Q6P9X4; Q78EG7"	"Protein tyrosine phosphatase type IVA 2 OS=Rattus norvegicus OX=10116 GN=Ptp4a2 PE=2 SV=1; Protein tyrosine phosphatase type IVA 1 OS=Rattus norvegicus OX=10116 GN=Ptp4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"685.36926"	"1369.73125"	"1369.73133"	"-0.06"	"-0.00004"	"6/72"	"6"	"72"	"434028.850463867"	"HCD"	"MS2"	"29.56112"	"24.3"	"100.000"	"95.4708"	"33731"	"33731"	"33711"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"37.2"	""	"35.0"	""	"29.6"	"0.8"	"44.0"	"47.2"	""	"672"	"29"	"35.000"	"28.000"	"0.0461678103604205"	"21"	"9.9E-05"	"0.0009422"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPANGk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"685.37952"	"1369.75176"	"1369.75162"	"0.10"	"0.00007"	"7/60"	"7"	"60"	"1083277.29846191"	"HCD"	"MS2"	"3.852408"	"94.3"	"100.000"	"65.3137"	"21537"	"21537"	"21519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.5"	""	"132.0"	""	"147.8"	""	"146.3"	"5.5"	"150.2"	"159.0"	""	"729"	"30"	"35.000"	"28.000"	"0.0346495447287715"	"19"	"0.0001991"	"0.002309"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPANGk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"685.38007"	"1369.75286"	"1369.75162"	"0.90"	"0.00062"	"5/60"	"5"	"60"	"990877.157531738"	"HCD"	"MS2"	"4.508162"	"87.4"	"100.000"	"65.3218"	"21574"	"21574"	"21552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.2"	""	"117.4"	""	"135.0"	""	"128.1"	"2.1"	"146.9"	"146.8"	""	"739"	"28"	"35.000"	"28.000"	"0.0545273564045443"	"18"	"0.0001686"	"0.001951"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDYQLSK"	"[K].gTDYQLSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.39087"	"1369.77446"	"1369.77275"	"1.25"	"0.00086"	"12/72"	"12"	"72"	"1746865.99938965"	"HCD"	"MS2"	"8.843779"	"142.9"	"100.000"	"49.5405"	"15167"	"15167"	"15143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.1"	""	"187.0"	""	"156.3"	""	"337.5"	""	"225.0"	"259.9"	""	"687"	"4"	"35.000"	"28.000"	"12.7328827932315"	"13"	"0.002189"	"0.02037"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTDYQLSK"	"[K].gTDYQLSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"685.39215"	"1369.77703"	"1369.77275"	"3.12"	"0.00214"	"4/72"	"4"	"72"	"1098978.44360352"	"HCD"	"MS2"	"29.44133"	"101.3"	"100.000"	"49.8110"	"15242"	"15242"	"15219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.0"	""	"121.9"	""	"119.0"	""	"170.2"	"0.3"	"174.0"	"235.3"	""	"705"	"16"	"35.000"	"28.000"	"0.959752211097464"	"24"	"0.001103"	"0.009167"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPVNPDK"	"[R].gANPVNPDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"685.39465"	"1369.78203"	"1369.78398"	"-1.43"	"-0.00098"	"7/76"	"7"	"76"	"483802.85546875"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"35.1903"	"9313"	"9313"	"9285"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"48.5"	""	"49.1"	""	"64.8"	""	"76.7"	"76.2"	""	"672"	"36"	"35.000"	"28.000"	"0.00923292435442405"	""	"0.000264"	"0.006101"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GANPVNPDK"	"[R].gANPVNPDk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"685.39624"	"1369.78520"	"1369.78398"	"0.89"	"0.00061"	"7/76"	"7"	"76"	"538062.058044434"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"35.0138"	"9279"	"9279"	"9260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"47.7"	""	"49.7"	""	"83.9"	"1.2"	"87.2"	"88.0"	""	"679"	"39"	"35.000"	"28.000"	"0.00434349952761479"	"28"	"0"	"0.000264"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"685.39716"	"1369.78703"	"1369.78885"	"-1.32"	"-0.00091"	"7/84"	"7"	"84"	"283690.368835449"	"HCD"	"MS2"	"26.14589"	"14.2"	"100.000"	"87.3490"	"30455"	"30455"	"30433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"20.1"	""	"18.9"	""	"19.4"	""	"26.5"	"26.2"	""	"667"	"36"	"35.000"	"28.000"	"0.00873164033241032"	"19"	"0.001453"	"0.01176"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"685.39722"	"1369.78716"	"1369.78885"	"-1.23"	"-0.00084"	"15/84"	"15"	"84"	"926854.37512207"	"HCD"	"MS2"	"2.580978"	"38.0"	"100.000"	"87.6491"	"30575"	"30575"	"30559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"62.2"	""	"59.7"	""	"39.1"	""	"61.6"	"75.4"	""	"667"	"58"	"35.000"	"28.000"	"4.8988691359423E-05"	"23"	"0"	"1.163E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.39740"	"1369.78752"	"1369.78885"	"-0.97"	"-0.00066"	"13/84"	"13"	"84"	"487810.139526367"	"HCD"	"MS2"	"5.232909"	"22.2"	"100.000"	"87.9537"	"30697"	"30697"	"30686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"30.4"	""	"35.5"	""	"31.3"	""	"37.6"	"43.8"	""	"653"	"45"	"35.000"	"28.000"	"0.00113209581672751"	"16"	"0.0001991"	"0.005491"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"685.39740"	"1369.78752"	"1369.78885"	"-0.97"	"-0.00066"	"15/84"	"15"	"84"	"1027927.35467529"	"HCD"	"MS2"	"3.214086"	"43.3"	"100.000"	"87.6135"	"30596"	"30596"	"30577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"67.7"	""	"58.9"	""	"55.6"	""	"77.5"	"86.2"	""	"653"	"61"	"35.000"	"28.000"	"2.90993431300668E-05"	"24"	"0"	"0.0002267"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"685.39752"	"1369.78777"	"1369.78885"	"-0.79"	"-0.00054"	"13/84"	"13"	"84"	"369993.084106445"	"HCD"	"MS2"	"11.96223"	"18.8"	"100.000"	"87.3161"	"30476"	"30476"	"30457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"26.1"	""	"29.8"	""	"25.2"	""	"30.9"	"38.1"	""	"653"	"43"	"35.000"	"28.000"	"0.00179425095314514"	"21"	"0.0001991"	"0.005847"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELIPAEEALR"	"[K].eLIPAEEALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"685.39783"	"1369.78838"	"1369.78885"	"-0.34"	"-0.00023"	"13/84"	"13"	"84"	"393874.864379883"	"HCD"	"MS2"	"5.377635"	"18.7"	"100.000"	"87.9063"	"30715"	"30715"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"28.8"	""	"34.7"	""	"23.0"	""	"26.6"	"36.9"	""	"659"	"45"	"35.000"	"28.000"	"0.00115839165154074"	"19"	"0.0001991"	"0.004919"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHEDKIR"	"[K].nHEDkIR.[V]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.26974"	"1369.79468"	"1369.79522"	"-0.39"	"-0.00018"	"4/62"	"4"	"62"	"1479532.53240967"	"HCD"	"MS2"	"8.083163"	"131.2"	"100.000"	"19.5314"	"3104"	"3104"	"3091"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.0"	""	"192.3"	""	"225.9"	""	"220.9"	""	"191.8"	"170.4"	""	"656"	"9"	"35.000"	"28.000"	"4.053907581698"	"13"	"0.009781"	"0.1301"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NHEDKIR"	"[K].nHEDkIR.[V]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"457.27002"	"1369.79551"	"1369.79522"	"0.21"	"0.00010"	"4/62"	"4"	"62"	"1369745.32702637"	"HCD"	"MS2"	"5.927875"	"125.6"	"100.000"	"19.5197"	"3137"	"3137"	"3124"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.1"	""	"185.5"	""	"215.8"	""	"205.5"	""	"177.6"	"157.5"	""	"625"	"12"	"34.000"	"27.000"	"1.90480280387553"	"17"	"0.006343"	"0.0794"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGHEATVGK"	"[R].lGHEATVGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"457.27774"	"1369.81867"	"1369.82037"	"-1.24"	"-0.00057"	"6/68"	"6"	"68"	"9067398.46081543"	"HCD"	"MS2"	"3.024171"	"316.7"	"100.000"	"34.7774"	"9184"	"9184"	"9166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"490.0"	""	"348.0"	""	"466.5"	""	"527.5"	"3.4"	"605.8"	"558.7"	""	"449"	"29"	"33.000"	"26.000"	"0.0280037598947541"	"20"	"0.0001686"	"0.001868"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"685.82446"	"1370.64165"	"1370.64258"	"-0.68"	"-0.00046"	"7/86"	"7"	"86"	"487220.087890625"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"84.5717"	"29371"	"29371"	"29351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"40.8"	""	"49.2"	""	"13.2"	""	"41.3"	"57.2"	""	"311"	"41"	"31.000"	"24.000"	"0.00123802778989893"	"16"	"0"	"0.0002587"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"685.82465"	"1370.64202"	"1370.64258"	"-0.41"	"-0.00028"	"6/86"	"6"	"86"	"578969.065307617"	"HCD"	"MS2"	"2.098755"	"28.8"	"100.000"	"84.5582"	"29337"	"29337"	"29318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"56.9"	""	"63.1"	""	"9.8"	"0.7"	"51.7"	"64.6"	""	"310"	"47"	"31.000"	"24.000"	"0.000295346411284303"	"20"	"0"	"0.0002021"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"685.82501"	"1370.64275"	"1370.64258"	"0.13"	"0.00009"	"7/86"	"7"	"86"	"1086002.49417114"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"84.2808"	"29253"	"29253"	"29235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"102.9"	""	"108.4"	""	"10.7"	""	"90.8"	"108.7"	""	"325"	"47"	"32.000"	"25.000"	"0.000314668569141323"	"19"	"0"	"0.0001593"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASADWGYDSK"	"[M].aSADWGYDSk.[N]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"685.82520"	"1370.64311"	"1370.64258"	"0.39"	"0.00027"	"7/86"	"7"	"86"	"885132.955200195"	"HCD"	"MS2"	"6.945675"	"43.7"	"100.000"	"84.2538"	"29214"	"29214"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.5"	""	"85.3"	""	"95.5"	""	"12.5"	"0.8"	"76.0"	"99.6"	""	"324"	"43"	"32.000"	"25.000"	"0.000791616822135391"	"17"	"0"	"0.0001194"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"685.86340"	"1370.71953"	"1370.72256"	"-2.21"	"-0.00151"	"12/80"	"12"	"80"	"598862.40838623"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"28.0404"	"6472"	"6472"	"6445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.9"	""	"42.6"	""	"51.8"	""	"45.4"	""	"60.6"	"63.1"	""	"615"	"41"	"34.000"	"27.000"	"0.00231656835848118"	"23"	"0"	"0.0001108"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"457.57867"	"1370.72147"	"1370.72256"	"-0.79"	"-0.00036"	"7/80"	"7"	"80"	"18686925.9785767"	"HCD"	"MS2"	"6.569926"	"176.2"	"76.256"	"28.2868"	"6528"	"6528"	"6513"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"294.9"	""	"193.9"	""	"243.6"	""	"280.5"	"17.1"	"325.1"	"314.0"	""	"624"	"52"	"34.000"	"27.000"	"0.000207565224734943"	""	"0"	"2.051E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"457.57877"	"1370.72174"	"1370.72256"	"-0.59"	"-0.00027"	"7/80"	"7"	"80"	"16734866.4512329"	"HCD"	"MS2"	"6.631668"	"181.4"	"80.609"	"28.0636"	"6481"	"6481"	"6461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"277.1"	""	"218.2"	""	"240.1"	""	"291.6"	"14.0"	"342.5"	"336.1"	""	"625"	"52"	"34.000"	"27.000"	"0.000196720682142874"	""	"0"	"1.765E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIHEDSTNR"	"[K].lGIHEDSTNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"685.86499"	"1370.72270"	"1370.72256"	"0.11"	"0.00007"	"7/80"	"7"	"80"	"578170.420837402"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"28.2983"	"6533"	"6533"	"6513"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.7"	""	"40.1"	""	"50.0"	""	"58.0"	""	"62.5"	"71.8"	""	"625"	"54"	"34.000"	"27.000"	"0.000128780474717916"	""	"0"	"4.988E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPAnGk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"457.58298"	"1370.73438"	"1370.73564"	"-0.92"	"-0.00042"	"7/60"	"7"	"60"	"1207311.28338623"	"HCD"	"MS2"	"46.24536"	"57.8"	"100.000"	"68.5957"	"22901"	"22901"	"22874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.1"	""	"54.8"	""	"70.5"	""	"95.7"	""	"120.3"	"118.5"	""	"715"	"20"	"35.000"	"28.000"	"0.381308113339817"	"17"	"0.001453"	"0.0118"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPAnGk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"685.87122"	"1370.73516"	"1370.73564"	"-0.35"	"-0.00024"	"7/60"	"7"	"60"	"735188.155761719"	"HCD"	"MS2"	"42.11171"	"64.4"	"100.000"	"68.2006"	"22707"	"22707"	"22684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.5"	""	"61.1"	""	"75.8"	""	"136.7"	""	"113.6"	"113.9"	""	"705"	"30"	"35.000"	"28.000"	"0.0377710555096256"	"22"	"0.001615"	"0.01348"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPAnGk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"457.58331"	"1370.73539"	"1370.73564"	"-0.18"	"-0.00008"	"7/60"	"7"	"60"	"1236430.14202881"	"HCD"	"MS2"	"29.1277"	"58.5"	"100.000"	"68.4471"	"22808"	"22808"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.5"	""	"62.4"	""	"65.6"	""	"110.1"	"0.2"	"112.7"	"108.9"	""	"705"	"19"	"35.000"	"28.000"	"0.474415774804721"	"19"	"0.001348"	"0.01063"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPAnGk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"685.87134"	"1370.73540"	"1370.73564"	"-0.17"	"-0.00012"	"7/60"	"7"	"60"	"2120204.6472168"	"HCD"	"MS2"	"1.161088"	"162.7"	"100.000"	"68.5799"	"22894"	"22894"	"22874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"278.4"	""	"158.1"	""	"196.7"	""	"278.5"	""	"311.4"	"319.0"	""	"705"	"29"	"35.000"	"28.000"	"0.0487707148587553"	"21"	"0.0001686"	"0.0016"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPAnGk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"685.87195"	"1370.73662"	"1370.73564"	"0.72"	"0.00049"	"7/60"	"7"	"60"	"2172114.86853027"	"HCD"	"MS2"	"0"	"161.6"	"100.000"	"68.5024"	"22830"	"22830"	"22812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"253.3"	""	"165.9"	""	"200.5"	""	"290.1"	""	"296.3"	"327.5"	""	"751"	"28"	"35.000"	"28.000"	"0.0547784754733393"	"19"	"0.0001686"	"0.001798"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDPANGK"	"[R].yFDPAnGk.[F]"	"N-Term(TMT6plex); N6(Deamidated); K8(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"685.87201"	"1370.73674"	"1370.73564"	"0.81"	"0.00055"	"7/60"	"7"	"60"	"889578.514038086"	"HCD"	"MS2"	"29.67142"	"72.7"	"100.000"	"68.2731"	"22769"	"22769"	"22746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.3"	""	"75.0"	""	"82.9"	""	"144.0"	""	"133.6"	"133.6"	""	"751"	"31"	"35.000"	"28.000"	"0.0307333527944614"	"22"	"0.0001991"	"0.002117"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTMEEK"	"[R].fQTMEEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"685.87366"	"1370.74004"	"1370.73901"	"0.75"	"0.00051"	"12/64"	"12"	"64"	"1275632.01605225"	"HCD"	"MS2"	"0"	"117.2"	"100.000"	"59.2790"	"19088"	"19088"	"19070"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.9"	""	"165.3"	""	"191.0"	""	"138.5"	"4.6"	"206.1"	"177.7"	""	"720"	"28"	"35.000"	"28.000"	"0.0555012163061841"	"24"	"0.004234"	"0.04956"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQTMEEK"	"[R].fQTMEEk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"685.87378"	"1370.74028"	"1370.73901"	"0.93"	"0.00064"	"12/64"	"12"	"64"	"1295799.78167725"	"HCD"	"MS2"	"0"	"111.5"	"100.000"	"59.0258"	"19020"	"19020"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.8"	""	"166.0"	""	"171.7"	""	"131.4"	""	"211.4"	"153.2"	""	"721"	"28"	"35.000"	"28.000"	"0.0616460521090048"	"23"	"0.004998"	"0.06341"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISAEEALPGR"	"[K].vISAEEALPGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"685.89520"	"1370.78313"	"1370.78410"	"-0.71"	"-0.00048"	"8/86"	"8"	"86"	"1014807.53540039"	"HCD"	"MS2"	"22.67082"	"58.7"	"100.000"	"72.2115"	"24364"	"24364"	"24342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.3"	""	"71.6"	""	"85.4"	""	"94.1"	"1.6"	"111.4"	"114.0"	""	"667"	"45"	"35.000"	"28.000"	"0.00111454045848709"	"26"	"0"	"0.0001457"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEGTPLVDGR"	"[K].vVEGTPLVDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08984"	"Delta(14)-sterol reductase OS=Rattus norvegicus OX=10116 GN=Lbr PE=1 SV=1"	"O08984"	"Delta(14)-sterol reductase OS=Rattus norvegicus OX=10116 GN=Lbr PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"685.89575"	"1370.78423"	"1370.78410"	"0.10"	"0.00007"	"8/92"	"8"	"92"	"1005958.5302124"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"63.9677"	"20991"	"20991"	"20984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.2"	""	"51.2"	""	"43.6"	""	"122.3"	"0.6"	"140.6"	"149.5"	""	"676"	"51"	"35.000"	"28.000"	"0.00029985873206883"	""	"0"	"0.000387"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISAEEALPGR"	"[K].vISAEEALPGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"685.89575"	"1370.78423"	"1370.78410"	"0.10"	"0.00007"	"6/86"	"6"	"86"	"1020200.00976563"	"HCD"	"MS2"	"22.13258"	"63.7"	"100.000"	"72.1155"	"24295"	"24295"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.7"	""	"81.7"	""	"93.7"	""	"99.2"	""	"118.4"	"118.1"	""	"676"	"43"	"35.000"	"28.000"	"0.00181935186490505"	"26"	"0"	"0.0002296"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVEGTPLVDGR"	"[K].vVEGTPLVDGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O08984"	"Delta(14)-sterol reductase OS=Rattus norvegicus OX=10116 GN=Lbr PE=1 SV=1"	"O08984"	"Delta(14)-sterol reductase OS=Rattus norvegicus OX=10116 GN=Lbr PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"685.89667"	"1370.78606"	"1370.78410"	"1.43"	"0.00098"	"9/92"	"9"	"92"	"1145066.94897461"	"HCD"	"MS2"	"18.15192"	"79.2"	"100.000"	"64.0030"	"21038"	"21038"	"21019"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"86.4"	""	"75.4"	""	"163.5"	"0.4"	"180.6"	"172.6"	""	"673"	"28"	"35.000"	"28.000"	"0.0564917552098241"	"22"	"0"	"0.0001709"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"457.60541"	"1370.80167"	"1370.80439"	"-1.98"	"-0.00091"	"7/62"	"7"	"62"	"195429.824951172"	"HCD"	"MS2"	"36.25293"	"8.0"	"100.000"	"118.9339"	"42426"	"42426"	"42424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.5"	""	"6.9"	""	"8.7"	""	"14.3"	""	"18.5"	"17.1"	""	"550"	"16"	"34.000"	"27.000"	"0.69555694902269"	"23"	"0.001615"	"0.01386"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60550"	"1370.80194"	"1370.80439"	"-1.78"	"-0.00081"	"8/62"	"8"	"62"	"2109259.48907471"	"HCD"	"MS2"	"43.27394"	"57.2"	"100.000"	"47.8140"	"14430"	"14430"	"14406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.0"	""	"55.2"	""	"59.8"	""	"113.2"	""	"139.4"	"116.0"	""	"550"	"10"	"34.000"	"27.000"	"2.46792918487706"	"13"	"0.005832"	"0.07165"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"457.60553"	"1370.80204"	"1370.80439"	"-1.71"	"-0.00078"	"8/62"	"8"	"62"	"1791781.29901123"	"HCD"	"MS2"	"22.1567"	"77.1"	"100.000"	"44.3956"	"13047"	"13047"	"13025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"81.1"	""	"89.5"	""	"142.6"	"1.8"	"172.0"	"150.4"	""	"550"	"28"	"34.000"	"27.000"	"0.0483428993838641"	"21"	"0.002189"	"0.0201"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"457.60556"	"1370.80213"	"1370.80439"	"-1.65"	"-0.00075"	"6/62"	"6"	"62"	"1475456.51025391"	"HCD"	"MS2"	"63.07247"	"66.7"	"100.000"	"45.2764"	"13405"	"13405"	"13378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.9"	""	"60.8"	""	"78.3"	""	"125.3"	""	"147.6"	"149.8"	""	"550"	"28"	"34.000"	"27.000"	"0.0413364040674756"	"23"	"0.0004582"	"0.006459"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60556"	"1370.80213"	"1370.80439"	"-1.65"	"-0.00075"	"9/62"	"9"	"62"	"1965642.72644043"	"HCD"	"MS2"	"28.97579"	"77.2"	"100.000"	"44.2585"	"13027"	"13027"	"13001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.6"	""	"69.3"	""	"80.8"	""	"148.9"	"1.6"	"187.2"	"163.3"	""	"550"	"19"	"34.000"	"27.000"	"0.323096827608371"	"14"	"0.002588"	"0.02727"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60562"	"1370.80231"	"1370.80439"	"-1.51"	"-0.00069"	"5/62"	"5"	"62"	"976452.966186523"	"HCD"	"MS2"	"55.02287"	"55.2"	"100.000"	"56.6763"	"18028"	"18028"	"18010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"62.2"	""	"70.0"	""	"107.2"	"0.1"	"112.3"	"102.1"	""	"550"	"4"	"34.000"	"27.000"	"11.228783124149"	"13"	"0.005712"	"0.07094"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"457.60562"	"1370.80231"	"1370.80439"	"-1.51"	"-0.00069"	"6/62"	"6"	"62"	"2950230.58343506"	"HCD"	"MS2"	"22.50629"	"115.6"	"100.000"	"42.5499"	"12294"	"12294"	"12270"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.0"	""	"98.9"	""	"108.1"	""	"235.9"	""	"308.4"	"246.2"	""	"550"	"34"	"34.000"	"27.000"	"0.0122273598554005"	"22"	"0.0001991"	"0.003466"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60568"	"1370.80249"	"1370.80439"	"-1.38"	"-0.00063"	"5/62"	"5"	"62"	"242061.108825684"	"HCD"	"MS2"	"33.46917"	"7.9"	"100.000"	"117.2160"	"42124"	"42124"	"42119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.7"	""	"8.5"	""	"8.6"	""	"11.8"	""	"20.6"	"16.6"	""	"526"	"4"	"34.000"	"27.000"	"9.83910847155502"	"13"	"0.007752"	"0.09887"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"457.60574"	"1370.80268"	"1370.80439"	"-1.25"	"-0.00057"	"6/62"	"6"	"62"	"11657640.2983398"	"HCD"	"MS2"	"9.268358"	"227.3"	"59.194"	"41.0409"	"11685"	"11685"	"11673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.2"	""	"178.0"	""	"204.6"	""	"514.4"	"0.8"	"540.4"	"506.9"	""	"529"	"36"	"34.000"	"27.000"	"0.00731856065211344"	"22"	"9.9E-05"	"0.000942"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"457.60577"	"1370.80277"	"1370.80439"	"-1.18"	"-0.00054"	"8/62"	"8"	"62"	"264223.783630371"	"HCD"	"MS2"	"21.46593"	"8.3"	"100.000"	"116.3673"	"41928"	"41928"	"41923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.2"	""	"8.5"	""	"6.6"	""	"20.4"	"1.5"	"16.6"	"16.8"	""	"529"	"20"	"34.000"	"27.000"	"0.275058883861786"	"20"	"0.0001991"	"0.003109"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"457.60577"	"1370.80277"	"1370.80439"	"-1.18"	"-0.00054"	"6/62"	"6"	"62"	"15287451.6854248"	"HCD"	"MS2"	"15.29508"	"259.5"	"53.089"	"40.7562"	"11568"	"11568"	"11550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.9"	""	"241.0"	""	"225.7"	""	"550.1"	"1.8"	"608.1"	"552.5"	""	"529"	"26"	"34.000"	"27.000"	"0.0612950884916662"	"20"	"0.0001991"	"0.001994"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.90503"	"1370.80278"	"1370.80439"	"-1.17"	"-0.00080"	"7/62"	"7"	"62"	"29013203.2817383"	"HCD"	"MS2"	"0"	"542.8"	"33.042"	"39.1570"	"10958"	"10958"	"10950"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"546.9"	""	"404.1"	""	"450.9"	""	"1247.8"	"8.4"	"1305.8"	"1207.1"	""	"514"	"41"	"34.000"	"27.000"	"0.00192279561631367"	"16"	"0.0001991"	"0.004265"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60580"	"1370.80286"	"1370.80439"	"-1.11"	"-0.00051"	"7/62"	"7"	"62"	"215427.730712891"	"HCD"	"MS2"	"29.94518"	"9.1"	"100.000"	"119.0274"	"42452"	"42452"	"42450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.0"	""	"9.0"	""	"7.8"	""	"20.7"	""	"22.1"	"20.0"	""	"512"	"15"	"34.000"	"27.000"	"0.736613994172331"	"13"	"0.002419"	"0.02265"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90509"	"1370.80290"	"1370.80439"	"-1.08"	"-0.00074"	"7/62"	"7"	"62"	"20348995.7009277"	"HCD"	"MS2"	"0"	"474.2"	"38.724"	"39.4250"	"11066"	"11066"	"11054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"473.3"	""	"360.2"	""	"386.6"	""	"1067.9"	""	"1165.3"	"1065.2"	""	"512"	"43"	"34.000"	"27.000"	"0.00135906417723133"	"18"	"0.0001991"	"0.002024"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"457.60583"	"1370.80295"	"1370.80439"	"-1.05"	"-0.00048"	"7/62"	"7"	"62"	"179654.972961426"	"HCD"	"MS2"	"28.6963"	"8.4"	"100.000"	"116.9476"	"42056"	"42056"	"42051"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.4"	""	"7.0"	""	"7.9"	""	"23.8"	""	"19.4"	"17.4"	""	"512"	"30"	"34.000"	"27.000"	"0.0269302239698745"	"15"	"0.0001991"	"0.002195"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60583"	"1370.80295"	"1370.80439"	"-1.05"	"-0.00048"	"7/62"	"7"	"62"	"195084.107421875"	"HCD"	"MS2"	"54.68208"	"7.9"	"100.000"	"116.3393"	"41920"	"41920"	"41911"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"7.7"	""	"7.9"	""	"18.4"	""	"20.1"	"12.3"	""	"512"	"26"	"34.000"	"27.000"	"0.0601506002137166"	"14"	"0.0001991"	"0.004134"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60583"	"1370.80295"	"1370.80439"	"-1.05"	"-0.00048"	"4/62"	"4"	"62"	"887970.698364258"	"HCD"	"MS2"	"31.00601"	"55.2"	"100.000"	"56.3701"	"17940"	"17940"	"17923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.5"	""	"68.7"	""	"58.6"	""	"109.8"	""	"107.6"	"113.5"	""	"512"	"13"	"34.000"	"27.000"	"1.14878819822882"	"13"	"0.002373"	"0.02255"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"457.60583"	"1370.80295"	"1370.80439"	"-1.05"	"-0.00048"	"6/62"	"6"	"62"	"13720853.6525879"	"HCD"	"MS2"	"5.893555"	"290.5"	"66.878"	"40.8904"	"11658"	"11658"	"11640"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"282.0"	""	"249.7"	""	"255.3"	""	"655.1"	"0.9"	"696.3"	"627.2"	""	"512"	"36"	"34.000"	"27.000"	"0.00625518221489657"	"22"	"9.9E-05"	"0.000944"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"685.90515"	"1370.80303"	"1370.80439"	"-0.99"	"-0.00068"	"7/62"	"7"	"62"	"884734.482666016"	"HCD"	"MS2"	"0"	"60.4"	"100.000"	"40.0737"	"11291"	"11291"	"11272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.6"	""	"56.4"	""	"60.7"	""	"123.0"	"1.3"	"141.0"	"126.4"	""	"512"	"34"	"34.000"	"27.000"	"0.0100055269322855"	"15"	"9.9E-05"	"0.0005263"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"457.60587"	"1370.80304"	"1370.80439"	"-0.98"	"-0.00045"	"6/62"	"6"	"62"	"8824889.10675049"	"HCD"	"MS2"	"13.07368"	"317.4"	"100.000"	"41.3518"	"11806"	"11806"	"11786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.3"	""	"264.9"	""	"294.1"	""	"711.2"	""	"760.5"	"658.7"	""	"512"	"40"	"34.000"	"27.000"	"0.00271794062642873"	"23"	"9.9E-05"	"0.0004424"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.90521"	"1370.80315"	"1370.80439"	"-0.90"	"-0.00062"	"7/62"	"7"	"62"	"6643553.69482422"	"HCD"	"MS2"	"0"	"316.3"	"79.087"	"39.7750"	"11171"	"11171"	"11159"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.8"	""	"235.2"	""	"270.8"	""	"711.6"	""	"773.2"	"710.2"	""	"512"	"41"	"34.000"	"27.000"	"0.00197351288080494"	"16"	"0.0001991"	"0.002279"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90521"	"1370.80315"	"1370.80439"	"-0.90"	"-0.00062"	"7/62"	"7"	"62"	"7146624.25653076"	"HCD"	"MS2"	"0"	"420.7"	"100.000"	"39.6929"	"11171"	"11171"	"11162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"412.0"	""	"326.3"	""	"340.4"	""	"954.1"	""	"1015.1"	"966.9"	""	"512"	"43"	"34.000"	"27.000"	"0.0013779706432417"	"18"	"0.0001686"	"0.00124"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60590"	"1370.80313"	"1370.80439"	"-0.91"	"-0.00042"	"8/62"	"8"	"62"	"211516.47857666"	"HCD"	"MS2"	"26.09829"	"9.1"	"100.000"	"116.7874"	"42016"	"42016"	"42013"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.2"	""	"12.4"	""	"8.4"	""	"18.9"	""	"24.8"	"14.7"	""	"512"	"21"	"34.000"	"27.000"	"0.21539715626117"	"14"	"0.004819"	"0.05886"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"457.60590"	"1370.80313"	"1370.80439"	"-0.91"	"-0.00042"	"11/62"	"11"	"62"	"13928890.9065552"	"HCD"	"MS2"	"3.308097"	"448.0"	"85.147"	"41.8275"	"12034"	"12034"	"12017"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.0"	""	"77.4"	""	"230.3"	""	"379.7"	""	"2722.3"	"851.8"	""	"512"	"37"	"34.000"	"27.000"	"0.00511964638625982"	"24"	"9.9E-05"	"0.0006989"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"457.60593"	"1370.80323"	"1370.80439"	"-0.85"	"-0.00039"	"4/62"	"4"	"62"	"216242.443359375"	"HCD"	"MS2"	"43.1039"	"10.4"	"100.000"	"116.2156"	"41880"	"41880"	"41875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"5.3"	""	"15.3"	""	"19.9"	""	"24.8"	"21.6"	""	"512"	"22"	"34.000"	"27.000"	"0.166816868879576"	"19"	"0.001217"	"0.009493"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"457.60593"	"1370.80323"	"1370.80439"	"-0.85"	"-0.00039"	"7/62"	"7"	"62"	"224961.566101074"	"HCD"	"MS2"	"21.01327"	"9.4"	"100.000"	"115.6138"	"41718"	"41718"	"41713"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"6.9"	""	"7.5"	""	"23.5"	""	"26.4"	"15.1"	""	"512"	"22"	"34.000"	"27.000"	"0.151091476523992"	"16"	"0.001488"	"0.01269"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60593"	"1370.80323"	"1370.80439"	"-0.85"	"-0.00039"	"5/62"	"5"	"62"	"220363.19140625"	"HCD"	"MS2"	"32.57811"	"9.4"	"100.000"	"119.7668"	"42575"	"42575"	"42573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"6.8"	""	"8.5"	""	"14.2"	""	"25.8"	"22.7"	""	"512"	"13"	"34.000"	"27.000"	"1.16476943398412"	"13"	"0.002525"	"0.02424"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"457.60593"	"1370.80323"	"1370.80439"	"-0.85"	"-0.00039"	"6/62"	"6"	"62"	"1945915.45697021"	"HCD"	"MS2"	"67.49352"	"82.9"	"100.000"	"45.1097"	"13371"	"13371"	"13344"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.7"	""	"83.0"	""	"87.1"	""	"164.5"	""	"189.4"	"178.3"	""	"512"	"28"	"34.000"	"27.000"	"0.0432752878500675"	"18"	"0.001348"	"0.0111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"457.60593"	"1370.80323"	"1370.80439"	"-0.85"	"-0.00039"	"6/62"	"6"	"62"	"4345555.60223389"	"HCD"	"MS2"	"9.671111"	"170.8"	"100.000"	"41.6505"	"11927"	"11927"	"11906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.2"	""	"141.1"	""	"159.3"	""	"361.8"	"0.3"	"441.6"	"353.4"	""	"512"	"38"	"34.000"	"27.000"	"0.00445902559588253"	"21"	"9.9E-05"	"0.0006453"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90533"	"1370.80339"	"1370.80439"	"-0.72"	"-0.00050"	"7/62"	"7"	"62"	"27862718.9492188"	"HCD"	"MS2"	"0"	"632.1"	"38.465"	"39.2122"	"10946"	"10946"	"10932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"641.9"	""	"466.7"	""	"510.3"	""	"1441.1"	""	"1554.0"	"1412.5"	""	"512"	"43"	"34.000"	"27.000"	"0.0013939267912766"	"18"	"0.0001991"	"0.003784"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90533"	"1370.80339"	"1370.80439"	"-0.72"	"-0.00050"	"7/62"	"7"	"62"	"19912366.4388428"	"HCD"	"MS2"	"0"	"1145.1"	"100.000"	"38.8841"	"10847"	"10847"	"10830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1264.2"	""	"912.4"	""	"932.1"	""	"2643.8"	""	"2699.2"	"2452.6"	""	"512"	"43"	"34.000"	"27.000"	"0.00140358903019739"	"18"	"0.0001991"	"0.003082"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60599"	"1370.80341"	"1370.80439"	"-0.71"	"-0.00033"	"4/62"	"4"	"62"	"195284.775939941"	"HCD"	"MS2"	"33.47525"	"8.5"	"100.000"	"117.2907"	"42134"	"42134"	"42132"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"6.6"	""	"8.9"	""	"16.4"	""	"21.8"	"17.9"	""	"512"	"15"	"34.000"	"27.000"	"0.867441039716358"	"13"	"0.002189"	"0.0209"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"457.60599"	"1370.80341"	"1370.80439"	"-0.71"	"-0.00033"	"6/62"	"6"	"62"	"9157728.17706299"	"HCD"	"MS2"	"6.236647"	"322.1"	"100.000"	"41.2067"	"11785"	"11785"	"11766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.1"	""	"260.0"	""	"289.1"	""	"728.8"	""	"801.1"	"653.7"	""	"512"	"38"	"34.000"	"27.000"	"0.00455239528969964"	"19"	"9.9E-05"	"0.0006122"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60602"	"1370.80350"	"1370.80439"	"-0.65"	"-0.00030"	"7/62"	"7"	"62"	"248737.713500977"	"HCD"	"MS2"	"20.04431"	"8.3"	"100.000"	"118.7675"	"42400"	"42400"	"42398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"4.7"	""	"8.4"	""	"20.8"	""	"19.8"	"16.6"	""	"514"	"11"	"34.000"	"27.000"	"2.03204407395955"	"13"	"0.003317"	"0.03693"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60602"	"1370.80350"	"1370.80439"	"-0.65"	"-0.00030"	"8/62"	"8"	"62"	"269846.215332031"	"HCD"	"MS2"	"25.48364"	"9.7"	"100.000"	"116.4909"	"41952"	"41952"	"41948"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"8.7"	""	"13.1"	""	"19.0"	""	"18.1"	"21.8"	""	"514"	"31"	"34.000"	"27.000"	"0.0196758327976193"	"14"	"0.0001686"	"0.001603"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"457.60602"	"1370.80350"	"1370.80439"	"-0.65"	"-0.00030"	"6/62"	"6"	"62"	"4427251.49578857"	"HCD"	"MS2"	"12.21576"	"176.5"	"100.000"	"41.5284"	"11912"	"11912"	"11894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.0"	""	"127.2"	""	"172.6"	""	"369.7"	"0.6"	"477.2"	"358.8"	""	"514"	"42"	"34.000"	"27.000"	"0.00178621249620321"	"22"	"9.9E-05"	"0.001019"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60602"	"1370.80350"	"1370.80439"	"-0.65"	"-0.00030"	"6/62"	"6"	"62"	"18924223.2320557"	"HCD"	"MS2"	"10.28098"	"261.7"	"40.818"	"40.3019"	"11419"	"11419"	"11402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"266.3"	""	"260.0"	""	"235.8"	""	"565.3"	"0.0"	"618.3"	"545.6"	""	"514"	"33"	"34.000"	"27.000"	"0.0122725023330027"	"15"	"0.0001686"	"0.001708"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"457.60602"	"1370.80350"	"1370.80439"	"-0.65"	"-0.00030"	"7/62"	"7"	"62"	"126713805.732056"	"HCD"	"MS2"	"7.460922"	"2279.9"	"52.203"	"38.8985"	"10817"	"10817"	"10797"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2507.2"	""	"1923.4"	""	"1859.8"	""	"5398.3"	""	"5379.5"	"4803.2"	""	"514"	"35"	"34.000"	"27.000"	"0.00829722989280148"	"21"	"0.0001991"	"0.003118"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.90540"	"1370.80351"	"1370.80439"	"-0.64"	"-0.00044"	"5/62"	"5"	"62"	"218639.696594238"	"HCD"	"MS2"	"20.18375"	"18.4"	"100.000"	"32.5915"	"8296"	"8296"	"8269"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"19.6"	""	"14.5"	""	"35.4"	""	"38.9"	"46.8"	""	"514"	"19"	"34.000"	"27.000"	"0.357217826221832"	"14"	"0.004234"	"0.04981"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90540"	"1370.80351"	"1370.80439"	"-0.64"	"-0.00044"	"7/62"	"7"	"62"	"17048845.2900391"	"HCD"	"MS2"	"0"	"730.0"	"73.340"	"39.4863"	"11055"	"11055"	"11041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"735.8"	""	"533.2"	""	"604.8"	""	"1649.4"	""	"1790.2"	"1646.3"	""	"514"	"43"	"34.000"	"27.000"	"0.00139615335193555"	"18"	"0.0001991"	"0.002935"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"685.90546"	"1370.80364"	"1370.80439"	"-0.55"	"-0.00037"	"7/62"	"7"	"62"	"381331.56829834"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"41.8112"	"12027"	"12027"	"12001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.1"	""	"27.0"	""	"26.6"	""	"43.5"	""	"162.1"	"65.7"	""	"514"	"30"	"34.000"	"27.000"	"0.0281794896408798"	"17"	"0.001453"	"0.01179"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"457.60608"	"1370.80368"	"1370.80439"	"-0.51"	"-0.00023"	"6/62"	"6"	"62"	"5646451.03515625"	"HCD"	"MS2"	"11.90278"	"218.4"	"100.000"	"42.2467"	"12170"	"12170"	"12152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.4"	""	"124.1"	""	"173.7"	""	"317.7"	""	"885.9"	"452.7"	""	"514"	"33"	"34.000"	"27.000"	"0.012020793131081"	"18"	"9.9E-05"	"0.0005716"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"457.60608"	"1370.80368"	"1370.80439"	"-0.51"	"-0.00023"	"12/62"	"12"	"62"	"13089112.0038452"	"HCD"	"MS2"	"5.413015"	"484.4"	"100.000"	"41.9383"	"12045"	"12045"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.8"	""	"77.6"	""	"256.7"	""	"415.2"	""	"2959.3"	"924.7"	""	"514"	"42"	"34.000"	"27.000"	"0.00176170474198334"	"25"	"9.9E-05"	"0.0006452"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60611"	"1370.80378"	"1370.80439"	"-0.45"	"-0.00020"	"6/62"	"6"	"62"	"3006251.00476074"	"HCD"	"MS2"	"23.71174"	"124.5"	"100.000"	"42.4671"	"12294"	"12294"	"12271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.7"	""	"103.3"	""	"113.4"	""	"268.9"	""	"298.9"	"276.2"	""	"512"	"39"	"34.000"	"27.000"	"0.0035747030043032"	"15"	"0.0001991"	"0.002616"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"457.60611"	"1370.80378"	"1370.80439"	"-0.45"	"-0.00020"	"6/62"	"6"	"62"	"4816941.04675293"	"HCD"	"MS2"	"14.16579"	"191.2"	"100.000"	"42.1408"	"12162"	"12162"	"12145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.6"	""	"137.5"	""	"156.4"	""	"290.8"	""	"703.8"	"390.4"	""	"512"	"34"	"34.000"	"27.000"	"0.0107954304877717"	"19"	"9.9E-05"	"0.0008839"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60614"	"1370.80387"	"1370.80439"	"-0.38"	"-0.00017"	"6/62"	"6"	"62"	"236897.622497559"	"HCD"	"MS2"	"20.48167"	"9.2"	"100.000"	"114.9796"	"41513"	"41513"	"41504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"10.2"	""	"8.6"	""	"21.0"	""	"19.5"	"19.0"	""	"512"	"17"	"34.000"	"27.000"	"0.553655942074117"	"14"	"0.00192"	"0.01615"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60614"	"1370.80387"	"1370.80439"	"-0.38"	"-0.00017"	"6/62"	"6"	"62"	"3672835.95306396"	"HCD"	"MS2"	"56.32566"	"132.0"	"100.000"	"42.7684"	"12417"	"12417"	"12398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.5"	"3.2"	"115.0"	""	"129.5"	""	"260.2"	"3.5"	"324.9"	"286.9"	""	"512"	"20"	"34.000"	"27.000"	"0.236722732528185"	"14"	"0.0001991"	"0.002513"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"457.60614"	"1370.80387"	"1370.80439"	"-0.38"	"-0.00017"	"9/62"	"9"	"62"	"11441715.2229004"	"HCD"	"MS2"	"19.90785"	"358.9"	"99.156"	"40.5938"	"11538"	"11538"	"11521"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"374.4"	""	"322.7"	""	"333.4"	""	"811.5"	""	"821.4"	"754.1"	""	"512"	"28"	"34.000"	"27.000"	"0.037431735666092"	"16"	"0.0001686"	"0.001722"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"457.60614"	"1370.80387"	"1370.80439"	"-0.38"	"-0.00017"	"11/62"	"11"	"62"	"80408999.486084"	"HCD"	"MS2"	"7.826095"	"2550.3"	"100.000"	"38.8132"	"10818"	"10818"	"10800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2885.8"	""	"2126.1"	""	"2075.1"	""	"6041.0"	""	"5951.0"	"5381.9"	""	"512"	"36"	"34.000"	"27.000"	"0.00597365263943936"	"21"	"0.0001991"	"0.002684"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"457.60617"	"1370.80396"	"1370.80439"	"-0.31"	"-0.00014"	"6/62"	"6"	"62"	"22020878.1140137"	"HCD"	"MS2"	"6.382094"	"368.9"	"48.037"	"40.3149"	"11390"	"11390"	"11373"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"370.9"	""	"402.9"	""	"317.0"	""	"752.1"	"4.4"	"904.4"	"760.7"	""	"512"	"40"	"34.000"	"27.000"	"0.00275575094689238"	"21"	"0.0001686"	"0.001437"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.90564"	"1370.80400"	"1370.80439"	"-0.28"	"-0.00019"	"7/62"	"7"	"62"	"416409.529174805"	"HCD"	"MS2"	"15.51045"	"38.1"	"100.000"	"40.3270"	"11429"	"11429"	"11402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"49.3"	""	"47.4"	""	"66.6"	""	"80.2"	"70.4"	""	"512"	"30"	"34.000"	"27.000"	"0.0283295688698283"	"15"	"0.0001991"	"0.002638"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60620"	"1370.80405"	"1370.80439"	"-0.24"	"-0.00011"	"8/62"	"8"	"62"	"214593.167358398"	"HCD"	"MS2"	"26.79282"	"10.2"	"100.000"	"117.7911"	"42238"	"42238"	"42236"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"6.4"	""	"11.5"	""	"21.9"	""	"22.1"	"23.3"	""	"512"	"19"	"34.000"	"27.000"	"0.327521613864326"	"14"	"0.0003294"	"0.006192"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"685.90570"	"1370.80412"	"1370.80439"	"-0.19"	"-0.00013"	"14/62"	"14"	"62"	"852432.065185547"	"HCD"	"MS2"	"3.82217"	"61.4"	"100.000"	"40.0100"	"11299"	"11299"	"11282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"54.8"	""	"54.6"	""	"138.1"	"1.4"	"144.5"	"127.2"	""	"512"	"46"	"34.000"	"27.000"	"0.000709969946790871"	"20"	"0"	"0.0003758"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.90570"	"1370.80412"	"1370.80439"	"-0.19"	"-0.00013"	"7/62"	"7"	"62"	"2689379.57897949"	"HCD"	"MS2"	"24.3162"	"199.1"	"100.000"	"39.6190"	"11108"	"11108"	"11086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"218.6"	""	"193.6"	""	"201.1"	""	"383.6"	""	"490.5"	"412.4"	""	"512"	"4"	"34.000"	"27.000"	"9.25209248357409"	"13"	"0.008926"	"0.1158"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60623"	"1370.80414"	"1370.80439"	"-0.18"	"-0.00008"	"5/62"	"5"	"62"	"221738.607788086"	"HCD"	"MS2"	"39.64394"	"9.0"	"100.000"	"117.5039"	"42183"	"42183"	"42179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"9.3"	""	"9.5"	""	"17.3"	""	"19.7"	"18.2"	""	"512"	"13"	"34.000"	"27.000"	"1.21685817841358"	"13"	"0.003043"	"0.03268"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"685.90576"	"1370.80425"	"1370.80439"	"-0.10"	"-0.00007"	"7/62"	"7"	"62"	"14322595.9882202"	"HCD"	"MS2"	"0"	"850.3"	"100.000"	"38.9348"	"10832"	"10832"	"10813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"939.3"	""	"682.7"	""	"712.0"	""	"1976.5"	""	"2015.1"	"1767.5"	""	"510"	"43"	"34.000"	"27.000"	"0.00142082365977642"	"18"	"0.0001686"	"0.001466"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60629"	"1370.80432"	"1370.80439"	"-0.04"	"-0.00002"	"6/62"	"6"	"62"	"2201622.55493164"	"HCD"	"MS2"	"42.92672"	"90.4"	"100.000"	"43.5618"	"12742"	"12742"	"12714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.2"	""	"76.3"	""	"98.0"	""	"185.3"	"2.0"	"208.7"	"182.8"	""	"549"	"36"	"34.000"	"27.000"	"0.00710464445209523"	"15"	"0.0001686"	"0.001389"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60629"	"1370.80432"	"1370.80439"	"-0.04"	"-0.00002"	"6/62"	"6"	"62"	"3359613.83978271"	"HCD"	"MS2"	"43.02401"	"126.8"	"100.000"	"42.8927"	"12434"	"12434"	"12409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.1"	""	"125.0"	""	"124.2"	""	"256.8"	"2.6"	"300.1"	"270.7"	""	"549"	"17"	"34.000"	"27.000"	"0.540184786524529"	"14"	"0.00307"	"0.03328"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60632"	"1370.80442"	"1370.80439"	"0.02"	"0.00001"	"7/62"	"7"	"62"	"1278422.40454102"	"HCD"	"MS2"	"47.23779"	"72.2"	"100.000"	"46.9720"	"14125"	"14125"	"14100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.6"	""	"73.1"	""	"85.2"	""	"146.7"	""	"148.3"	"155.4"	""	"549"	"18"	"34.000"	"27.000"	"0.402292882342397"	"14"	"0.002755"	"0.02918"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60638"	"1370.80460"	"1370.80439"	"0.16"	"0.00007"	"8/62"	"8"	"62"	"1400043.66192627"	"HCD"	"MS2"	"50.42178"	"54.9"	"100.000"	"47.4044"	"14301"	"14301"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.8"	""	"58.6"	""	"65.4"	""	"101.8"	""	"133.3"	"110.0"	""	"549"	"17"	"34.000"	"27.000"	"0.56694685276999"	"14"	"0.001951"	"0.01669"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60638"	"1370.80460"	"1370.80439"	"0.16"	"0.00007"	"6/62"	"6"	"62"	"2175143.63043213"	"HCD"	"MS2"	"34.96569"	"85.6"	"100.000"	"43.7226"	"12773"	"12773"	"12748"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.7"	""	"77.8"	""	"93.1"	""	"160.2"	"0.5"	"207.7"	"178.8"	""	"549"	"39"	"34.000"	"27.000"	"0.00345575025537499"	"15"	"0.0001991"	"0.004965"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60648"	"1370.80487"	"1370.80439"	"0.36"	"0.00016"	"7/62"	"7"	"62"	"206208.004699707"	"HCD"	"MS2"	"58.5719"	"8.8"	"100.000"	"115.0620"	"41555"	"41555"	"41547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.9"	""	"9.4"	""	"7.8"	""	"17.7"	""	"19.8"	"19.7"	""	"549"	"17"	"34.000"	"27.000"	"0.515872466212497"	"14"	"0.001718"	"0.01518"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"457.60660"	"1370.80524"	"1370.80439"	"0.62"	"0.00028"	"6/62"	"6"	"62"	"70756221.480957"	"HCD"	"MS2"	"3.996583"	"312.4"	"12.986"	"39.9685"	"11283"	"11283"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"298.3"	""	"245.6"	""	"292.9"	""	"678.5"	""	"767.8"	"698.0"	""	"532"	"40"	"34.000"	"27.000"	"0.00243154122231087"	"24"	"0.0001686"	"0.001128"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"457.60663"	"1370.80533"	"1370.80439"	"0.69"	"0.00032"	"11/62"	"11"	"62"	"2285729670.6875"	"HCD"	"MS2"	"4.019619"	"383.2"	"0.474"	"39.0906"	"10932"	"10932"	"10922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"390.4"	""	"286.7"	""	"317.2"	""	"860.4"	""	"950.9"	"849.9"	""	"532"	"37"	"34.000"	"27.000"	"0.005456091395676"	"25"	"0.0005161"	"0.00689"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"457.60684"	"1370.80597"	"1370.80439"	"1.16"	"0.00053"	"7/62"	"7"	"62"	"1748216215.41406"	"HCD"	"MS2"	"3.841642"	"338.9"	"0.566"	"39.3579"	"11003"	"11003"	"10997"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"326.1"	""	"244.9"	""	"280.9"	""	"768.8"	""	"838.1"	"776.0"	""	"531"	"37"	"34.000"	"27.000"	"0.00504736283319636"	"25"	"0.001316"	"0.0103"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"457.60684"	"1370.80597"	"1370.80439"	"1.16"	"0.00053"	"11/62"	"11"	"62"	"751423906.824219"	"HCD"	"MS2"	"3.832229"	"342.6"	"1.400"	"39.7155"	"11147"	"11147"	"11136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.3"	""	"253.2"	""	"274.5"	""	"790.0"	""	"845.0"	"780.9"	""	"531"	"35"	"34.000"	"27.000"	"0.00767475508768034"	"21"	"0.0007633"	"0.007533"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"457.60687"	"1370.80606"	"1370.80439"	"1.22"	"0.00056"	"11/62"	"11"	"62"	"93334379.4467773"	"HCD"	"MS2"	"3.706489"	"325.1"	"10.608"	"39.9908"	"11258"	"11258"	"11244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"307.1"	""	"269.6"	""	"283.2"	""	"703.8"	""	"789.4"	"748.6"	""	"531"	"45"	"34.000"	"27.000"	"0.000903783743656158"	"25"	"0.0001686"	"0.001885"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"685.90680"	"1370.80632"	"1370.80439"	"1.41"	"0.00097"	"11/62"	"11"	"62"	"370019.890563965"	"HCD"	"MS2"	"15.91004"	"34.0"	"100.000"	"41.9681"	"12057"	"12057"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.7"	""	"24.8"	""	"27.1"	""	"35.1"	""	"142.8"	"65.9"	""	"531"	"29"	"34.000"	"27.000"	"0.0364808144365823"	"17"	"0.0001686"	"0.001357"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60696"	"1370.80634"	"1370.80439"	"1.42"	"0.00065"	"8/62"	"8"	"62"	"1130690.12414551"	"HCD"	"MS2"	"51.03772"	"60.4"	"100.000"	"47.4597"	"14286"	"14286"	"14258"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.7"	""	"49.4"	""	"70.8"	""	"118.4"	"1.7"	"140.3"	"122.7"	""	"531"	"23"	"34.000"	"27.000"	"0.139015915913517"	"14"	"0.001596"	"0.01301"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"457.60706"	"1370.80661"	"1370.80439"	"1.63"	"0.00074"	"6/62"	"6"	"62"	"211134.902770996"	"HCD"	"MS2"	"16.81363"	"8.2"	"100.000"	"115.2564"	"41608"	"41608"	"41599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"8.2"	""	"7.6"	""	"14.5"	""	"19.4"	"18.7"	""	"508"	"12"	"34.000"	"27.000"	"1.79818229233571"	"13"	"0.004998"	"0.06369"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"457.60706"	"1370.80661"	"1370.80439"	"1.63"	"0.00074"	"11/62"	"11"	"62"	"646483796.1875"	"HCD"	"MS2"	"3.7304"	"365.5"	"1.680"	"39.6885"	"11170"	"11170"	"11162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"351.7"	""	"255.0"	""	"305.4"	""	"795.6"	""	"928.3"	"852.1"	""	"508"	"43"	"34.000"	"27.000"	"0.00137351598028178"	"26"	"0.0001991"	"0.005533"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLTDAEK"	"[M].vHLTDAEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"685.90704"	"1370.80681"	"1370.80439"	"1.77"	"0.00121"	"5/62"	"5"	"62"	"365491.205383301"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"40.4802"	"11457"	"11457"	"11437"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.0"	""	"37.7"	""	"40.0"	""	"59.4"	""	"72.1"	"68.7"	""	"508"	"17"	"34.000"	"27.000"	"0.471882331593292"	"18"	"0.005507"	"0.06999"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTSGEYK"	"[K].nDTSGEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"686.36011"	"1371.71294"	"1371.71563"	"-1.96"	"-0.00135"	"6/78"	"6"	"78"	"570678.031005859"	"HCD"	"MS2"	"0"	"56.5"	"100.000"	"29.9014"	"7223"	"7223"	"7203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.9"	""	"62.7"	""	"67.3"	""	"106.2"	""	"114.7"	"108.4"	""	"655"	"32"	"35.000"	"28.000"	"0.0208070880181446"	"20"	"0.0001686"	"0.001073"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDTSGEYK"	"[K].nDTSGEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"686.36090"	"1371.71453"	"1371.71563"	"-0.81"	"-0.00055"	"12/78"	"12"	"78"	"949434.329467773"	"HCD"	"MS2"	"0"	"90.7"	"100.000"	"30.0930"	"7260"	"7260"	"7236"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.1"	""	"93.6"	""	"97.8"	""	"163.6"	""	"183.2"	"178.3"	""	"650"	"37"	"35.000"	"28.000"	"0.00682155462177645"	"23"	"9.9E-05"	"0.0006111"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQPMTPEAVR"	"[R].nQPMTPEAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"686.36517"	"1371.72307"	"1371.72520"	"-1.55"	"-0.00107"	"6/94"	"6"	"94"	"293174.496826172"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"37.0536"	"10066"	"10066"	"10036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"30.5"	""	"26.6"	""	"31.8"	""	"32.2"	"39.9"	""	"711"	"32"	"35.000"	"28.000"	"0.0212246044380554"	"23"	"0.004234"	"0.04906"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQPMTPEAVR"	"[R].nQPMTPEAVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"686.36566"	"1371.72405"	"1371.72520"	"-0.84"	"-0.00058"	"7/94"	"7"	"94"	"265241.480895996"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"36.8195"	"10008"	"10008"	"9981"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"21.8"	""	"21.5"	""	"22.4"	""	"32.2"	"35.9"	""	"699"	"31"	"35.000"	"28.000"	"0.0286053443453109"	"21"	"0.0001991"	"0.00431"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDSTHYK"	"[K].yDSTHYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"686.36914"	"1371.73100"	"1371.73089"	"0.09"	"0.00006"	"6/52"	"6"	"52"	"379934.834533691"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"32.2105"	"8106"	"8106"	"8082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"42.1"	""	"36.7"	""	"50.0"	""	"54.2"	"59.0"	""	"722"	"28"	"35.000"	"28.000"	"0.0577440448329895"	"23"	"0.0001991"	"0.005538"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDSTHYK"	"[K].yDSTHYk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"686.36969"	"1371.73210"	"1371.73089"	"0.89"	"0.00061"	"6/52"	"6"	"52"	"334548.119384766"	"HCD"	"MS2"	"100"	"28.9"	"100.000"	"32.0956"	"8097"	"8097"	"8072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"35.6"	""	"37.9"	""	"40.0"	""	"57.3"	"52.2"	""	"748"	"13"	"35.000"	"28.000"	"1.874440253766"	"15"	"0.002834"	"0.03078"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"686.39294"	"1371.77861"	"1371.77934"	"-0.53"	"-0.00037"	"9/92"	"9"	"92"	"571391.909484863"	"HCD"	"MS2"	"7.058206"	"34.2"	"100.000"	"80.1655"	"27562"	"27562"	"27540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"41.7"	""	"44.7"	""	"63.2"	""	"64.1"	"62.6"	""	"689"	"57"	"35.000"	"28.000"	"7.00146990267528E-05"	""	"0"	"3.097E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"686.39343"	"1371.77959"	"1371.77934"	"0.18"	"0.00012"	"9/92"	"9"	"92"	"408155.795837402"	"HCD"	"MS2"	"30.33718"	"22.2"	"100.000"	"79.8710"	"27442"	"27442"	"27415"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"24.5"	""	"26.9"	""	"41.3"	""	"36.9"	"41.7"	""	"683"	"35"	"35.000"	"28.000"	"0.0101016125732735"	"21"	"0"	"7.936E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.6604"	"0.0000"	"1"	"1"	"1"	"686.39398"	"1371.78069"	"1371.77934"	"0.98"	"0.00067"	"9/92"	"9"	"92"	"479728.572753906"	"HCD"	"MS2"	"11.66996"	"29.7"	"100.000"	"80.2872"	"27638"	"27638"	"27624"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.1"	""	"40.5"	""	"33.6"	""	"51.2"	""	"59.0"	"58.2"	""	"669"	"53"	"35.000"	"28.000"	"0.000150105332932633"	""	"0"	"2.67E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDEANALLR"	"[K].qLDEANALLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"686.39410"	"1371.78093"	"1371.77934"	"1.16"	"0.00079"	"7/92"	"7"	"92"	"448969.913818359"	"HCD"	"MS2"	"34.27765"	"24.9"	"100.000"	"79.9857"	"27516"	"27516"	"27493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	"2.2"	"28.2"	""	"33.1"	""	"41.4"	"0.7"	"48.8"	"47.0"	""	"668"	"39"	"35.000"	"28.000"	"0.00380843429045431"	"27"	"0"	"1.871E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QATELALLQR"	"[K].qATELALLQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"686.41144"	"1371.81560"	"1371.81573"	"-0.10"	"-0.00007"	"5/92"	"5"	"92"	"192510.635620117"	"HCD"	"MS2"	"55.42429"	"16.6"	"100.000"	"80.5454"	"27716"	"27716"	"27689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"19.6"	""	"21.0"	""	"29.2"	""	"32.1"	"33.8"	""	"627"	"13"	"34.000"	"27.000"	"1.40681679744037"	"17"	"0.004819"	"0.05884"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QATELALLQR"	"[K].qATELALLQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"Q5FVC2"	"Rho guanine nucleotide exchange factor 2 OS=Rattus norvegicus OX=10116 GN=Arhgef2 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"686.41168"	"1371.81609"	"1371.81573"	"0.26"	"0.00018"	"6/92"	"6"	"92"	"207496.479064941"	"HCD"	"MS2"	"58.24602"	"17.0"	"100.000"	"80.5890"	"27761"	"27761"	"27732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"23.5"	""	"25.1"	""	"26.0"	""	"27.5"	"32.1"	""	"625"	"24"	"34.000"	"27.000"	"0.111647761922478"	"16"	"0.001872"	"0.01548"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAAAPLDK"	"[K].iDAAAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"686.41498"	"1371.82268"	"1371.82479"	"-1.54"	"-0.00105"	"14/76"	"14"	"76"	"943154.317565918"	"HCD"	"MS2"	"0"	"65.2"	"100.000"	"76.8243"	"26209"	"26209"	"26184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.3"	""	"101.6"	""	"99.7"	""	"81.8"	""	"103.1"	"96.4"	""	"565"	"50"	"34.000"	"27.000"	"0.000257643062118045"	"25"	"0"	"2.914E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAAAPLDK"	"[K].iDAAAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"686.41516"	"1371.82305"	"1371.82479"	"-1.27"	"-0.00087"	"14/76"	"14"	"76"	"2162857.53265381"	"HCD"	"MS2"	"0"	"143.3"	"100.000"	"77.0969"	"26316"	"26316"	"26305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"291.0"	""	"206.9"	""	"225.7"	""	"191.0"	""	"205.2"	"233.3"	""	"544"	"51"	"34.000"	"27.000"	"0.000241306435274325"	""	"0"	"5.714E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAAAPLDK"	"[K].iDAAAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"686.41565"	"1371.82402"	"1371.82479"	"-0.56"	"-0.00038"	"14/76"	"14"	"76"	"1900222.32556152"	"HCD"	"MS2"	"0"	"126.0"	"100.000"	"77.2144"	"26394"	"26394"	"26389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.6"	""	"190.3"	""	"213.0"	""	"166.4"	""	"180.0"	"210.7"	""	"554"	"50"	"34.000"	"27.000"	"0.000254964531375629"	"25"	"0"	"2.287E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAAAPLDK"	"[K].iDAAAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"P06757"	"Alcohol dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Adh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"686.41577"	"1371.82427"	"1371.82479"	"-0.38"	"-0.00026"	"14/76"	"14"	"76"	"1142134.15075684"	"HCD"	"MS2"	"0"	"75.9"	"100.000"	"76.9265"	"26281"	"26281"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.4"	""	"117.9"	""	"122.2"	""	"107.2"	""	"108.6"	"108.1"	""	"551"	"48"	"34.000"	"27.000"	"0.00040937526945007"	"23"	"0"	"4.819E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTDINQLPET"	"[K].lTDINQLPET.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"O35550"	"Rab GTPase-binding effector protein 1 OS=Rattus norvegicus OX=10116 GN=Rabep1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"686.87976"	"1372.75224"	"1372.75213"	"0.09"	"0.00006"	"4/90"	"4"	"90"	"157750.337097168"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"105.5269"	"37788"	"37788"	"37769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"5.9"	""	"7.1"	""	"8.5"	""	"14.0"	"18.4"	""	"788"	"15"	"35.000"	"28.000"	"1.22319647772257"	"21"	"0.005082"	"0.06433"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVLEADSAIR"	"[R].lGVLEADSAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"686.89221"	"1372.77715"	"1372.79975"	"-16.46"	"-0.01130"	"7/86"	"7"	"86"	"398711.074157715"	"HCD"	"MS2"	"39.89191"	"27.4"	"100.000"	"96.5970"	"34187"	"34187"	"34164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"37.6"	""	"38.4"	""	"43.4"	""	"52.0"	"55.8"	""	"792"	"11"	"35.000"	"28.000"	"3.32426154661682"	"13"	"0.00455"	"0.05347"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALHLLEEYR"	"[R].aLHLLEEYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"458.26392"	"1372.77719"	"1372.77862"	"-1.04"	"-0.00047"	"9/66"	"9"	"66"	"466156.922180176"	"HCD"	"MS2"	"29.02924"	"12.4"	"100.000"	"80.5844"	"27759"	"27759"	"27732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"15.1"	""	"17.2"	""	"19.8"	""	"28.3"	"20.9"	""	"794"	"29"	"35.000"	"28.000"	"0.0516167322479217"	"23"	"0.0001991"	"0.003317"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVLEADSAIR"	"[R].lGVLEADSAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"686.90344"	"1372.79961"	"1372.79975"	"-0.10"	"-0.00007"	"9/86"	"9"	"86"	"374726.239318848"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"96.3222"	"34108"	"34108"	"34084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"32.8"	""	"32.3"	""	"41.0"	"1.2"	"43.0"	"42.4"	""	"797"	"54"	"36.000"	"29.000"	"0.00016804605661629"	"26"	"0"	"4.892E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVLEADSAIR"	"[R].lGVLEADSAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"686.90363"	"1372.79997"	"1372.79975"	"0.17"	"0.00011"	"9/86"	"9"	"86"	"296447.479675293"	"HCD"	"MS2"	"44.98326"	"18.6"	"100.000"	"96.2464"	"34045"	"34045"	"34021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.1"	""	"21.3"	""	"29.5"	""	"27.3"	"1.3"	"41.1"	"29.4"	""	"793"	"25"	"35.000"	"28.000"	"0.120017117424217"	"19"	"0"	"9.295E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVLEADSAIR"	"[R].lGVLEADSAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"686.90405"	"1372.80083"	"1372.79975"	"0.79"	"0.00054"	"7/86"	"7"	"86"	"458231.093505859"	"HCD"	"MS2"	"54.41563"	"31.2"	"100.000"	"96.6203"	"34227"	"34227"	"34209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.0"	""	"37.2"	""	"47.7"	""	"48.6"	""	"56.0"	"62.4"	""	"778"	"14"	"35.000"	"28.000"	"1.54507512743612"	"21"	"0.0001686"	"0.001359"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVLEADSAIR"	"[R].lGVLEADSAIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"Q566Q8"	"UPF0696 protein C11orf68 homolog OS=Rattus norvegicus OX=10116 GN=Bles03 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"686.90576"	"1372.80425"	"1372.79975"	"3.28"	"0.00225"	"9/86"	"9"	"86"	"485874.152160645"	"HCD"	"MS2"	"40.69183"	"30.7"	"100.000"	"96.5555"	"34170"	"34170"	"34149"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.3"	""	"38.7"	""	"45.7"	""	"46.7"	"0.8"	"59.4"	"52.7"	""	"745"	"24"	"35.000"	"28.000"	"0.132472666166947"	"22"	"0"	"9.385E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEPVSELLK"	"[R].TKEPVSELLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"1"	"2"	"2"	"0.2600"	"0.0000"	"1"	"1"	"1"	"686.92560"	"1372.84392"	"1372.82490"	"13.86"	"0.00951"	"14/100"	"14"	"100"	"3140287.27508545"	"HCD"	"MS2"	"1.605122"	"185.6"	"100.000"	"90.4780"	"31750"	"31750"	"31733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.9"	""	"245.6"	""	"275.0"	""	"313.6"	"1.1"	"334.8"	"322.6"	""	"485"	"50"	"33.000"	"26.000"	"0.000255100754402132"	""	"0.003317"	"0.03647"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEPVSELLK"	"[R].TKEPVSELLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"1"	"2"	"2"	"0.2708"	"0.0000"	"1"	"1"	"1"	"686.92627"	"1372.84526"	"1372.82490"	"14.83"	"0.01018"	"10/100"	"10"	"100"	"3324562.88128662"	"HCD"	"MS2"	"3.556924"	"200.4"	"100.000"	"90.5713"	"31749"	"31749"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.0"	""	"258.7"	""	"289.1"	""	"334.6"	"3.1"	"366.0"	"346.3"	""	"514"	"48"	"34.000"	"27.000"	"0.000413935928240815"	""	"0.005266"	"0.0669"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEPVSELLK"	"[R].TKEPVSELLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"1"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"686.92627"	"1372.84526"	"1372.82490"	"14.83"	"0.01018"	"14/100"	"14"	"100"	"6151019.26031494"	"HCD"	"MS2"	"0"	"360.6"	"100.000"	"91.0183"	"31968"	"31968"	"31956"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"535.9"	""	"472.7"	""	"549.4"	""	"522.2"	""	"663.8"	"673.1"	""	"514"	"50"	"34.000"	"27.000"	"0.00024999603651068"	"26"	"0.006958"	"0.08717"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEPVSELLK"	"[R].TKEPVSELLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"1"	"2"	"2"	"0.2759"	"0.0000"	"1"	"1"	"1"	"686.92639"	"1372.84551"	"1372.82490"	"15.01"	"0.01030"	"8/100"	"8"	"100"	"1132811.11834717"	"HCD"	"MS2"	"6.247853"	"71.4"	"100.000"	"91.3138"	"32086"	"32086"	"32072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.3"	""	"85.9"	""	"108.4"	""	"98.0"	""	"149.3"	"134.8"	""	"514"	"58"	"34.000"	"27.000"	"3.76645795125669E-05"	""	"0.0009352"	"0.008254"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEPVSELLK"	"[R].TKEPVSELLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"1"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"686.92639"	"1372.84551"	"1372.82490"	"15.01"	"0.01030"	"14/100"	"14"	"100"	"8235685.09368896"	"HCD"	"MS2"	"0.3393882"	"478.2"	"100.000"	"90.7483"	"31859"	"31859"	"31849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"728.6"	""	"634.5"	""	"697.4"	""	"774.4"	"0.3"	"855.2"	"836.5"	""	"514"	"50"	"34.000"	"27.000"	"0.000248275075900382"	""	"0.008135"	"0.1039"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEPVSELLK"	"[R].TKEPVSELLk.[N]"	"K10(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"1"	"2"	"2"	"0.2791"	"0.0000"	"1"	"1"	"1"	"686.92645"	"1372.84563"	"1372.82490"	"15.10"	"0.01037"	"8/100"	"8"	"100"	"727240.860168457"	"HCD"	"MS2"	"4.633557"	"49.8"	"100.000"	"91.4553"	"32107"	"32107"	"32089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.7"	""	"59.0"	""	"80.1"	""	"73.5"	""	"102.8"	"82.6"	""	"514"	"43"	"34.000"	"27.000"	"0.00118013889299075"	"24"	"0.00212"	"0.01961"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGTTVPYTSR"	"[R].yGTTVPYTSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.36530"	"1373.72331"	"1373.72625"	"-2.13"	"-0.00147"	"8/84"	"8"	"84"	"1240076.66564941"	"HCD"	"MS2"	"0"	"74.4"	"100.000"	"48.1610"	"14609"	"14609"	"14593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.4"	""	"106.7"	""	"101.1"	""	"122.7"	""	"125.2"	"141.4"	""	"683"	"24"	"35.000"	"28.000"	"0.124563472875095"	"22"	"0.001488"	"0.0125"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGTTVPYTSR"	"[R].yGTTVPYTSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"D3ZAA9"	"MAGUK p55 subfamily member 2 OS=Rattus norvegicus OX=10116 GN=Mpp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"687.36603"	"1373.72478"	"1373.72625"	"-1.07"	"-0.00073"	"8/84"	"8"	"84"	"1184610.36950684"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"48.4534"	"14691"	"14691"	"14663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.5"	""	"94.3"	""	"106.1"	""	"119.8"	""	"124.3"	"147.0"	""	"711"	"32"	"35.000"	"28.000"	"0.024034749775185"	"23"	"0"	"0.0001842"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVSEYTYR"	"[K].iNVSEYTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"687.36615"	"1373.72502"	"1373.72625"	"-0.89"	"-0.00061"	"8/84"	"8"	"84"	"2354918.38189697"	"HCD"	"MS2"	"43.31882"	"148.0"	"100.000"	"73.7574"	"24963"	"24963"	"24945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.1"	""	"185.3"	""	"204.4"	""	"274.1"	""	"219.8"	"286.9"	""	"711"	"24"	"35.000"	"28.000"	"0.1441582843519"	""	"9.9E-05"	"0.0005336"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVSEYTYR"	"[K].iNVSEYTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"P20595"	"Guanylate cyclase soluble subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gucy1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"687.36749"	"1373.72771"	"1373.72625"	"1.06"	"0.00073"	"7/84"	"7"	"84"	"2423850.73248291"	"HCD"	"MS2"	"46.09793"	"155.8"	"100.000"	"73.8718"	"25039"	"25039"	"25021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.6"	""	"209.7"	""	"192.8"	""	"295.6"	"0.9"	"237.1"	"303.2"	""	"733"	"22"	"35.000"	"28.000"	"0.217808076132607"	"27"	"9.9E-05"	"0.0008327"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNPEEGK"	"[K].eLNPEEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"687.38629"	"1373.76531"	"1373.76767"	"-1.72"	"-0.00118"	"7/76"	"7"	"76"	"760647.600830078"	"HCD"	"MS2"	"24.75889"	"58.7"	"100.000"	"44.1024"	"12963"	"12963"	"12938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.3"	""	"62.7"	""	"66.8"	""	"93.3"	""	"122.6"	"132.9"	""	"826"	"28"	"36.000"	"29.000"	"0.0633796813896108"	"23"	"0.002525"	"0.0251"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELNPEEGK"	"[K].eLNPEEGk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"687.38702"	"1373.76677"	"1373.76767"	"-0.65"	"-0.00045"	"7/76"	"7"	"76"	"718260.01965332"	"HCD"	"MS2"	"25.73177"	"53.4"	"100.000"	"44.2878"	"13003"	"13003"	"12977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.9"	""	"50.9"	""	"53.7"	""	"86.9"	"3.4"	"115.3"	"123.3"	""	"820"	"32"	"36.000"	"29.000"	"0.025928885906425"	"26"	"0.002189"	"0.02102"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"687.39502"	"1373.78276"	"1373.78376"	"-0.73"	"-0.00050"	"8/100"	"8"	"100"	"1621128.62811279"	"HCD"	"MS2"	"29.71409"	"64.2"	"100.000"	"89.8524"	"31460"	"31460"	"31446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.9"	""	"82.3"	""	"92.6"	""	"129.0"	"1.5"	"115.7"	"106.0"	""	"870"	"54"	"36.000"	"29.000"	"0.000155413684596089"	"25"	"0"	"3.611E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8354"	"0.0000"	"1"	"1"	"1"	"687.39508"	"1373.78288"	"1373.78376"	"-0.64"	"-0.00044"	"8/100"	"8"	"100"	"8843672.50036621"	"HCD"	"MS2"	"0"	"195.0"	"80.997"	"90.1542"	"31583"	"31583"	"31567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.3"	""	"277.9"	""	"298.9"	""	"356.1"	""	"337.1"	"337.5"	""	"881"	"79"	"36.000"	"29.000"	"5.22331133567633E-07"	""	"0"	"1.287E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"687.39532"	"1373.78337"	"1373.78376"	"-0.28"	"-0.00019"	"9/100"	"9"	"100"	"3797966.59259033"	"HCD"	"MS2"	"7.213878"	"137.8"	"100.000"	"90.4284"	"31693"	"31693"	"31678"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.4"	""	"188.7"	""	"198.1"	""	"234.0"	"0.2"	"261.4"	"246.2"	""	"881"	"69"	"36.000"	"29.000"	"5.06927571330024E-06"	"28"	"0"	"2.389E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"687.39557"	"1373.78386"	"1373.78376"	"0.07"	"0.00005"	"7/100"	"7"	"100"	"1297404.02502441"	"HCD"	"MS2"	"35.14286"	"58.9"	"100.000"	"89.7264"	"31449"	"31449"	"31434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.9"	""	"76.8"	""	"87.1"	""	"111.0"	"1.0"	"106.6"	"105.4"	""	"879"	"41"	"36.000"	"29.000"	"0.00378406754085132"	"24"	"0"	"0.0001642"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8784"	"0.0000"	"1"	"1"	"1"	"687.39575"	"1373.78423"	"1373.78376"	"0.34"	"0.00023"	"8/100"	"8"	"100"	"4541498.00457764"	"HCD"	"MS2"	"1.053012"	"144.8"	"100.000"	"90.2937"	"31677"	"31677"	"31660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.8"	""	"192.9"	""	"203.5"	""	"257.7"	""	"268.7"	"270.1"	""	"879"	"74"	"36.000"	"29.000"	"1.67478429381563E-06"	"26"	"0"	"3.831E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVAVSDGVIK"	"[M].aSGVAVSDGVIk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"687.39587"	"1373.78447"	"1373.78376"	"0.52"	"0.00036"	"9/100"	"9"	"100"	"8109983.07128906"	"HCD"	"MS2"	"0.2633136"	"222.4"	"100.000"	"90.0126"	"31564"	"31564"	"31555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"278.1"	""	"313.8"	""	"326.7"	""	"403.5"	""	"401.3"	"383.7"	""	"872"	"72"	"36.000"	"29.000"	"2.59111381156389E-06"	"27"	"0"	"1.109E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"458.60223"	"1373.79215"	"1373.79416"	"-1.46"	"-0.00067"	"6/66"	"6"	"66"	"20282540.5097656"	"HCD"	"MS2"	"18.80366"	"783.5"	"100.000"	"37.9352"	"10459"	"10459"	"10439"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1210.1"	""	"1113.1"	""	"1058.0"	""	"1282.4"	""	"1328.9"	"1428.7"	""	"797"	"36"	"36.000"	"29.000"	"0.0109756013828026"	"26"	"9.9E-05"	"0.0008768"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"458.60257"	"1373.79316"	"1373.79416"	"-0.73"	"-0.00033"	"6/66"	"6"	"66"	"16526650.4475098"	"HCD"	"MS2"	"19.48515"	"676.2"	"100.000"	"38.0248"	"10460"	"10460"	"10439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1066.4"	""	"949.5"	""	"906.1"	""	"1089.9"	""	"1169.6"	"1225.6"	""	"848"	"34"	"36.000"	"29.000"	"0.01660985558937"	"25"	"9.9E-05"	"0.0009016"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"687.40027"	"1373.79326"	"1373.79416"	"-0.65"	"-0.00045"	"5/66"	"5"	"66"	"1465519.74230957"	"HCD"	"MS2"	"35.67721"	"119.6"	"100.000"	"38.2316"	"10545"	"10545"	"10518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.8"	""	"143.7"	""	"176.3"	""	"190.4"	""	"208.2"	"233.2"	""	"848"	"32"	"36.000"	"29.000"	"0.0296733006304964"	"23"	"0.0001686"	"0.001662"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"687.40039"	"1373.79350"	"1373.79416"	"-0.47"	"-0.00033"	"12/66"	"12"	"66"	"1716175.60424805"	"HCD"	"MS2"	"45.87234"	"134.1"	"100.000"	"38.1097"	"10531"	"10531"	"10503"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.5"	""	"189.0"	""	"174.3"	""	"214.0"	""	"223.7"	"257.7"	""	"832"	"33"	"36.000"	"29.000"	"0.0217316814623634"	"20"	"0.0001686"	"0.001093"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"458.60306"	"1373.79462"	"1373.79416"	"0.34"	"0.00015"	"6/66"	"6"	"66"	"58252998.7817383"	"HCD"	"MS2"	"6.165984"	"370.0"	"14.367"	"38.3236"	"10583"	"10583"	"10566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"563.9"	""	"499.2"	""	"516.7"	""	"584.9"	""	"622.4"	"719.7"	""	"835"	"34"	"36.000"	"29.000"	"0.0175249375816246"	"25"	"9.9E-05"	"0.0009631"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQEHFGK"	"[K].vAQEHFGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"458.60309"	"1373.79471"	"1373.79416"	"0.40"	"0.00019"	"6/66"	"6"	"66"	"56249886.2087402"	"HCD"	"MS2"	"5.105398"	"356.5"	"14.957"	"38.2339"	"10582"	"10582"	"10565"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"535.0"	""	"473.3"	""	"496.6"	""	"555.7"	"4.2"	"636.4"	"675.5"	""	"835"	"34"	"36.000"	"29.000"	"0.0154403265058261"	"21"	"9.9E-05"	"0.0009775"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQADGQVK"	"[K].aVQADGQVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"687.40924"	"1373.81120"	"1373.81529"	"-2.97"	"-0.00204"	"14/76"	"14"	"76"	"934143.637145996"	"HCD"	"MS2"	"0"	"78.3"	"100.000"	"36.4104"	"9806"	"9806"	"9789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"108.6"	""	"98.9"	""	"112.9"	""	"142.0"	"148.1"	""	"717"	"44"	"35.000"	"28.000"	"0.00136927021096157"	"24"	"0"	"7.016E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQADGQVK"	"[K].aVQADGQVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"687.40942"	"1373.81157"	"1373.81529"	"-2.70"	"-0.00186"	"11/76"	"11"	"76"	"261564.88104248"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"36.7069"	"9962"	"9962"	"9936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"30.6"	""	"27.3"	""	"34.6"	"0.5"	"44.5"	"53.6"	""	"717"	"22"	"35.000"	"28.000"	"0.213053738863683"	"23"	"0.0001991"	"0.003754"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGAGGNK"	"[K].iAEVGAGGNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"458.60919"	"1373.81302"	"1373.81529"	"-1.65"	"-0.00075"	"12/74"	"12"	"74"	"1312066.93487549"	"HCD"	"MS2"	"14.13844"	"58.6"	"100.000"	"46.4396"	"13909"	"13909"	"13895"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"66.2"	""	"77.9"	""	"102.7"	"1.3"	"104.0"	"116.6"	""	"725"	"28"	"35.000"	"28.000"	"0.0542385425334232"	"21"	"9.9E-05"	"0.0009863"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQADGQVK"	"[K].aVQADGQVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"687.41028"	"1373.81328"	"1373.81529"	"-1.46"	"-0.00100"	"14/76"	"14"	"76"	"1279484.62866211"	"HCD"	"MS2"	"0"	"100.4"	"100.000"	"36.3580"	"9821"	"9821"	"9803"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.5"	""	"121.9"	""	"141.7"	""	"164.6"	""	"171.9"	"182.4"	""	"725"	"45"	"35.000"	"28.000"	"0.00106981334466657"	"25"	"0"	"9.62E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQQLDNK"	"[K].aVQQLDNk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B1WC88"	"UPF0729 protein C18orf32 homolog OS=Rattus norvegicus OX=10116 PE=3 SV=1"	"B1WC88"	"UPF0729 protein C18orf32 homolog OS=Rattus norvegicus OX=10116 PE=3 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"687.41040"	"1373.81352"	"1373.81529"	"-1.28"	"-0.00088"	"7/66"	"7"	"66"	"502849.947631836"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"43.7456"	"12782"	"12782"	"12761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.7"	""	"34.8"	""	"47.5"	""	"77.2"	"1.4"	"92.6"	"100.2"	""	"722"	"43"	"35.000"	"28.000"	"0.00169631773206483"	"21"	"0.0001686"	"0.001094"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQADGQVK"	"[K].aVQADGQVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"687.41064"	"1373.81401"	"1373.81529"	"-0.93"	"-0.00064"	"14/76"	"14"	"76"	"675564.970581055"	"HCD"	"MS2"	"0"	"55.1"	"100.000"	"36.7042"	"9923"	"9923"	"9902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.7"	""	"69.9"	""	"78.3"	""	"77.0"	""	"107.3"	"109.3"	""	"719"	"45"	"35.000"	"28.000"	"0.00110840606811464"	"25"	"0"	"7.375E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGAGGNK"	"[K].iAEVGAGGNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"687.41107"	"1373.81487"	"1373.81529"	"-0.30"	"-0.00021"	"9/74"	"9"	"74"	"1570144.53808594"	"HCD"	"MS2"	"0"	"107.1"	"100.000"	"46.6138"	"13979"	"13979"	"13961"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.1"	""	"118.5"	""	"144.1"	""	"190.7"	""	"203.4"	"215.2"	""	"725"	"57"	"35.000"	"28.000"	"6.58124427755262E-05"	""	"0"	"2.192E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQQLDNK"	"[K].aVQQLDNk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B1WC88"	"UPF0729 protein C18orf32 homolog OS=Rattus norvegicus OX=10116 PE=3 SV=1"	"B1WC88"	"UPF0729 protein C18orf32 homolog OS=Rattus norvegicus OX=10116 PE=3 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"687.41150"	"1373.81572"	"1373.81529"	"0.32"	"0.00022"	"14/66"	"14"	"66"	"526333.452453613"	"HCD"	"MS2"	"0"	"44.9"	"100.000"	"43.5296"	"12729"	"12729"	"12698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.0"	""	"37.7"	""	"42.4"	""	"81.4"	"0.6"	"99.9"	"106.8"	""	"730"	"42"	"35.000"	"28.000"	"0.00238942203534555"	"25"	"0"	"0.0001838"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGAGGNK"	"[K].iAEVGAGGNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"687.41211"	"1373.81694"	"1373.81529"	"1.21"	"0.00083"	"16/74"	"16"	"74"	"1183833.70721436"	"HCD"	"MS2"	"5.692142"	"90.1"	"100.000"	"47.0186"	"14106"	"14106"	"14086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.2"	""	"107.3"	""	"118.6"	""	"167.2"	"1.4"	"162.4"	"170.6"	""	"710"	"46"	"35.000"	"28.000"	"0.000940217549205378"	"27"	"0"	"1.41E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEVGAGGNK"	"[K].iAEVGAGGNk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"P86252"	"Transcriptional activator protein Pur-alpha (Fragments) OS=Rattus norvegicus OX=10116 GN=Pura PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"687.41248"	"1373.81767"	"1373.81529"	"1.74"	"0.00119"	"9/74"	"9"	"74"	"765572.907653809"	"HCD"	"MS2"	"0"	"58.3"	"100.000"	"46.7023"	"13979"	"13979"	"13962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.7"	""	"66.2"	""	"77.6"	""	"114.6"	""	"97.8"	"112.9"	""	"693"	"57"	"35.000"	"28.000"	"7.35704206083076E-05"	"25"	"0"	"7.166E-06"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TESIPVAAK"	"[R].tESIPVAAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"687.42303"	"1373.83879"	"1373.84044"	"-1.20"	"-0.00082"	"11/68"	"11"	"68"	"608394.366210938"	"HCD"	"MS2"	"62.03902"	"55.4"	"100.000"	"57.7071"	"18447"	"18447"	"18423"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.3"	""	"77.2"	""	"78.5"	""	"97.1"	""	"90.8"	"108.5"	""	"627"	"32"	"34.000"	"27.000"	"0.0186310591725982"	""	"0.0001686"	"0.001313"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAELQDKTK"	"[K].iVAELQDKTK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"1"	"2"	"2"	"0.0784"	"0.0000"	"1"	"1"	"1"	"687.42310"	"1373.83891"	"1373.82015"	"13.66"	"0.00938"	"14/90"	"14"	"90"	"296183.53503418"	"HCD"	"MS2"	"18.68094"	"26.3"	"100.000"	"83.8961"	"29069"	"29069"	"29049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.3"	""	"30.5"	""	"33.1"	""	"52.1"	""	"48.4"	"50.9"	""	"627"	"51"	"34.000"	"27.000"	"0.000262565429946777"	""	"0.0005161"	"0.006677"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"687.42334"	"1373.83940"	"1373.84044"	"-0.75"	"-0.00052"	"7/72"	"7"	"72"	"1819561.95483398"	"HCD"	"MS2"	"4.503827"	"132.9"	"100.000"	"75.2578"	"25571"	"25571"	"25553"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"128.8"	""	"148.9"	""	"252.4"	""	"297.6"	"307.1"	""	"626"	"43"	"34.000"	"27.000"	"0.00160895662945299"	"21"	"9.9E-05"	"0.0004415"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TESIPVAAK"	"[R].tESIPVAAk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"Q923M1"	"Mitochondrial peptide methionine sulfoxide reductase OS=Rattus norvegicus OX=10116 GN=Msra PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"687.42346"	"1373.83965"	"1373.84044"	"-0.57"	"-0.00039"	"12/68"	"12"	"68"	"765587.858154297"	"HCD"	"MS2"	"65.33687"	"67.4"	"100.000"	"57.4675"	"18385"	"18385"	"18356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.9"	""	"98.8"	""	"84.5"	""	"108.2"	""	"132.4"	"133.1"	""	"641"	"37"	"35.000"	"28.000"	"0.00575212127399825"	""	"9.9E-05"	"0.0004249"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"687.42346"	"1373.83965"	"1373.84044"	"-0.57"	"-0.00039"	"12/72"	"12"	"72"	"2991452.27355957"	"HCD"	"MS2"	"0"	"207.0"	"100.000"	"74.7980"	"25416"	"25416"	"25404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.5"	""	"216.1"	""	"211.3"	""	"438.6"	""	"446.2"	"418.9"	""	"641"	"33"	"35.000"	"28.000"	"0.0170933834003783"	"17"	"0.0001686"	"0.001473"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"458.61807"	"1373.83966"	"1373.84044"	"-0.56"	"-0.00026"	"10/72"	"10"	"72"	"2217795.08636475"	"HCD"	"MS2"	"12.55395"	"90.9"	"100.000"	"74.9927"	"25463"	"25463"	"25446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.0"	""	"97.7"	""	"99.3"	""	"168.6"	""	"206.0"	"208.0"	""	"641"	"37"	"35.000"	"28.000"	"0.00594056885304447"	"17"	"0.0001991"	"0.003792"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"458.61807"	"1373.83966"	"1373.84044"	"-0.56"	"-0.00026"	"10/72"	"10"	"72"	"2202182.01635742"	"HCD"	"MS2"	"7.741798"	"87.9"	"100.000"	"75.1113"	"25543"	"25543"	"25518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.6"	""	"81.7"	""	"104.9"	""	"149.9"	""	"212.3"	"196.9"	""	"641"	"37"	"35.000"	"28.000"	"0.00591327441847021"	"17"	"0.0001686"	"0.001512"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIDQEVK"	"[K].aLIDQEVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"458.61810"	"1373.83976"	"1373.84044"	"-0.50"	"-0.00023"	"6/66"	"6"	"66"	"873846.769775391"	"HCD"	"MS2"	"24.01433"	"41.9"	"100.000"	"68.7120"	"22915"	"22915"	"22899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"52.9"	""	"58.2"	""	"68.4"	""	"78.7"	"77.4"	""	"641"	"45"	"35.000"	"28.000"	"0.00101117898179157"	"27"	"9.9E-05"	"0.0009319"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIDQEVK"	"[K].aLIDQEVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"3"	"3"	"0.7381"	"0.0000"	"1"	"1"	"1"	"458.61810"	"1373.83976"	"1373.84044"	"-0.50"	"-0.00023"	"6/66"	"6"	"66"	"982775.003051758"	"HCD"	"MS2"	"28.01256"	"48.3"	"100.000"	"68.7758"	"22974"	"22974"	"22954"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.2"	""	"58.2"	""	"61.4"	""	"78.6"	""	"100.7"	"89.0"	""	"641"	"42"	"35.000"	"28.000"	"0.00200829743627484"	"26"	"0.0001991"	"0.003919"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAELQDKTK"	"[K].iVAELQDKTK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"1"	"2"	"2"	"0.0755"	"0.0000"	"1"	"1"	"1"	"687.42365"	"1373.84001"	"1373.82015"	"14.46"	"0.00993"	"14/90"	"14"	"90"	"344743.600708008"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"83.9274"	"29111"	"29111"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.9"	""	"45.0"	""	"44.1"	""	"62.7"	""	"50.6"	"57.5"	""	"640"	"53"	"35.000"	"28.000"	"0.000159275867193259"	""	"0.001049"	"0.008559"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLIGNEK"	"[K].eLLIGNEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"687.42365"	"1373.84001"	"1373.84044"	"-0.31"	"-0.00021"	"7/72"	"7"	"72"	"923616.986694336"	"HCD"	"MS2"	"23.05076"	"75.7"	"100.000"	"76.0274"	"25884"	"25884"	"25865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.4"	""	"66.5"	""	"71.7"	""	"169.4"	"2.1"	"187.2"	"145.7"	""	"640"	"38"	"35.000"	"28.000"	"0.00495621318051993"	""	"9.9E-05"	"0.0006893"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"458.61823"	"1373.84012"	"1373.84044"	"-0.23"	"-0.00011"	"10/72"	"10"	"72"	"880454.387023926"	"HCD"	"MS2"	"18.38887"	"38.8"	"100.000"	"74.7886"	"25412"	"25412"	"25389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"46.9"	""	"45.3"	""	"76.7"	""	"86.2"	"77.0"	""	"640"	"37"	"35.000"	"28.000"	"0.00682574372206904"	"16"	"0.0001991"	"0.003648"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLIGNEK"	"[K].eLLIGNEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.5250"	"0.0000"	"1"	"1"	"1"	"687.42371"	"1373.84014"	"1373.84044"	"-0.22"	"-0.00015"	"7/72"	"7"	"72"	"998598.282592773"	"HCD"	"MS2"	"30.9658"	"82.1"	"100.000"	"76.0744"	"25935"	"25935"	"25913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.5"	"2.2"	"84.9"	""	"75.0"	""	"177.4"	""	"201.4"	"156.9"	""	"640"	"40"	"35.000"	"28.000"	"0.00337403806845202"	""	"9.9E-05"	"0.0006612"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIDQEVK"	"[K].aLIDQEVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"687.42383"	"1373.84038"	"1373.84044"	"-0.04"	"-0.00003"	"14/66"	"14"	"66"	"2832186.90179443"	"HCD"	"MS2"	"28.90572"	"198.6"	"100.000"	"68.5807"	"22862"	"22862"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"301.9"	""	"266.3"	""	"269.5"	""	"299.7"	""	"360.8"	"386.2"	""	"664"	"43"	"35.000"	"28.000"	"0.00162232583301821"	""	"9.9E-05"	"0.0005318"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"687.42383"	"1373.84038"	"1373.84044"	"-0.04"	"-0.00003"	"7/72"	"7"	"72"	"8242038.63934326"	"HCD"	"MS2"	"0"	"524.8"	"100.000"	"75.0908"	"25535"	"25535"	"25518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"538.1"	""	"518.5"	""	"544.3"	""	"1025.0"	""	"1202.5"	"1170.3"	""	"664"	"32"	"35.000"	"28.000"	"0.0190168282287295"	"17"	"0.0001991"	"0.002675"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"458.61832"	"1373.84040"	"1373.84044"	"-0.03"	"-0.00001"	"10/72"	"10"	"72"	"934161.723449707"	"HCD"	"MS2"	"17.00564"	"41.6"	"100.000"	"74.6888"	"25340"	"25340"	"25325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"44.7"	""	"54.6"	""	"78.5"	"0.0"	"92.3"	"81.6"	""	"664"	"34"	"35.000"	"28.000"	"0.0136501707406702"	"16"	"0.0001991"	"0.00273"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAELQDKTK"	"[K].iVAELQDKTK.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"1"	"2"	"2"	"0.1200"	"0.0000"	"1"	"1"	"1"	"687.42389"	"1373.84050"	"1373.82015"	"14.82"	"0.01018"	"14/90"	"14"	"90"	"643204.255737305"	"HCD"	"MS2"	"7.373173"	"51.2"	"100.000"	"84.2509"	"29241"	"29241"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.0"	""	"63.6"	""	"72.2"	""	"82.6"	""	"100.4"	"98.4"	""	"664"	"50"	"35.000"	"28.000"	"0.0003615247909867"	""	"0.002189"	"0.02084"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIDQEVK"	"[K].aLIDQEVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"687.42389"	"1373.84050"	"1373.84044"	"0.05"	"0.00003"	"14/66"	"14"	"66"	"2797025.56762695"	"HCD"	"MS2"	"32.56395"	"197.7"	"100.000"	"68.6557"	"22925"	"22925"	"22906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"309.3"	""	"279.6"	""	"273.9"	""	"290.4"	""	"355.6"	"376.9"	""	"664"	"42"	"35.000"	"28.000"	"0.00223428249886394"	""	"0.0001686"	"0.001028"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"687.42395"	"1373.84062"	"1373.84044"	"0.14"	"0.00009"	"12/72"	"12"	"72"	"2276976.19586182"	"HCD"	"MS2"	"1.35118"	"160.2"	"100.000"	"74.6518"	"25326"	"25326"	"25314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.6"	""	"171.9"	""	"176.7"	""	"330.3"	""	"348.7"	"324.9"	""	"664"	"33"	"35.000"	"28.000"	"0.0164489463347191"	"17"	"0.0001686"	"0.001505"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIDQEVK"	"[K].aLIDQEVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"687.42395"	"1373.84062"	"1373.84044"	"0.14"	"0.00009"	"7/66"	"7"	"66"	"1576722.96551514"	"HCD"	"MS2"	"28.12764"	"112.5"	"100.000"	"68.9603"	"23049"	"23049"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.0"	""	"158.8"	""	"160.0"	""	"174.3"	"0.4"	"183.9"	"206.9"	""	"664"	"39"	"35.000"	"28.000"	"0.00399151792292981"	""	"9.9E-05"	"0.0009895"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"687.42407"	"1373.84087"	"1373.84044"	"0.31"	"0.00022"	"7/72"	"7"	"72"	"1674571.87518311"	"HCD"	"MS2"	"2.918434"	"125.6"	"100.000"	"75.3834"	"25653"	"25653"	"25635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.6"	""	"128.7"	""	"138.0"	""	"230.0"	""	"286.6"	"275.4"	""	"664"	"45"	"35.000"	"28.000"	"0.00108677110699774"	"20"	"9.9E-05"	"0.000745"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIDQEVK"	"[K].aLIDQEVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"687.42419"	"1373.84111"	"1373.84044"	"0.49"	"0.00034"	"7/66"	"7"	"66"	"1575703.984375"	"HCD"	"MS2"	"32.07692"	"110.7"	"100.000"	"68.8964"	"22989"	"22989"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.2"	""	"147.8"	""	"145.8"	""	"183.7"	""	"184.8"	"193.1"	""	"643"	"29"	"35.000"	"28.000"	"0.0420901988244309"	""	"0.0001686"	"0.001402"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIILEEGK"	"[K].nIILEEGk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"687.42419"	"1373.84111"	"1373.84044"	"0.49"	"0.00034"	"12/72"	"12"	"72"	"8257939.17016602"	"HCD"	"MS2"	"0"	"533.3"	"100.000"	"74.9514"	"25447"	"25447"	"25432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"543.4"	""	"523.1"	""	"576.7"	""	"1025.4"	""	"1258.8"	"1152.9"	""	"643"	"35"	"35.000"	"28.000"	"0.0110963712196478"	"17"	"0.0001991"	"0.003486"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLQADPNK"	"[R].mLQADPNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.89282"	"1374.77837"	"1374.78154"	"-2.31"	"-0.00159"	"5/66"	"5"	"66"	"475865.671447754"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"50.6426"	"15616"	"15616"	"15594"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.1"	""	"57.8"	""	"54.4"	""	"63.3"	"2.9"	"82.5"	"94.9"	""	"926"	"15"	"36.000"	"29.000"	"1.49479277835295"	"18"	"0.002286"	"0.02179"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQQELPVR"	"[R].yLQQELPVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00972"	"[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bckdk PE=1 SV=2"	"Q00972"	"[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bckdk PE=1 SV=2"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"687.89984"	"1374.79241"	"1374.79427"	"-1.35"	"-0.00093"	"6/76"	"6"	"76"	"700460.430847168"	"HCD"	"MS2"	"44.48572"	"49.2"	"100.000"	"76.3674"	"26054"	"26054"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.4"	""	"54.2"	""	"60.6"	""	"93.1"	""	"110.9"	"96.2"	""	"911"	"31"	"36.000"	"29.000"	"0.0353580561624369"	""	"0.0001991"	"0.002681"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLQQELPVR"	"[R].yLQQELPVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00972"	"[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bckdk PE=1 SV=2"	"Q00972"	"[3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Bckdk PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"687.90131"	"1374.79534"	"1374.79427"	"0.78"	"0.00053"	"7/76"	"7"	"76"	"637441.717407227"	"HCD"	"MS2"	"38.81541"	"44.8"	"100.000"	"76.2881"	"25990"	"25990"	"25968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"48.1"	""	"60.2"	""	"81.5"	""	"95.8"	"93.9"	""	"896"	"38"	"36.000"	"29.000"	"0.00733293801599658"	"23"	"0.0001686"	"0.001168"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLELEGEK"	"[K].vLELEGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.91467"	"1374.82207"	"1374.82445"	"-1.73"	"-0.00119"	"7/64"	"7"	"64"	"802038.893127441"	"HCD"	"MS2"	"45.98687"	"52.0"	"100.000"	"82.5194"	"28512"	"28512"	"28492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.4"	""	"68.1"	""	"59.7"	""	"79.7"	"0.5"	"111.5"	"103.8"	""	"883"	"27"	"36.000"	"29.000"	"0.0786920225828331"	"23"	"0.0001686"	"0.001378"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLELEGEK"	"[K].vLELEGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"687.91522"	"1374.82317"	"1374.82445"	"-0.93"	"-0.00064"	"6/64"	"6"	"64"	"382426.695129395"	"HCD"	"MS2"	"30.0135"	"36.2"	"100.000"	"82.1784"	"28378"	"28378"	"28352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"43.5"	""	"36.5"	""	"59.8"	"0.3"	"80.9"	"79.3"	""	"880"	"13"	"36.000"	"29.000"	"2.31981139026042"	"16"	"0.00329"	"0.03551"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLELEGEK"	"[K].vLELEGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"687.91565"	"1374.82402"	"1374.82445"	"-0.31"	"-0.00022"	"6/64"	"6"	"64"	"842387.785522461"	"HCD"	"MS2"	"49.33749"	"54.8"	"100.000"	"82.5624"	"28558"	"28558"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.2"	""	"62.2"	""	"65.9"	""	"89.2"	""	"122.6"	"107.8"	""	"886"	"24"	"36.000"	"29.000"	"0.167264480579959"	"22"	"0.0001686"	"0.001495"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLELEGEK"	"[K].vLELEGEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"P61203"	"COP9 signalosome complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Cops2 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"687.91602"	"1374.82475"	"1374.82445"	"0.22"	"0.00015"	"7/64"	"7"	"64"	"618411.804992676"	"HCD"	"MS2"	"46.81288"	"43.4"	"100.000"	"82.2634"	"28441"	"28441"	"28412"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.6"	""	"54.9"	""	"57.8"	""	"75.8"	"0.1"	"94.1"	"76.6"	""	"894"	"15"	"36.000"	"29.000"	"1.53570402711244"	"16"	"0.0001991"	"0.002079"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.6491"	"0.0000"	"1"	"1"	"1"	"687.92072"	"1374.83415"	"1374.83569"	"-1.11"	"-0.00077"	"8/78"	"8"	"78"	"424907.896484375"	"HCD"	"MS2"	"21.34283"	"40.2"	"100.000"	"53.5481"	"16795"	"16795"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.1"	""	"41.5"	""	"54.5"	""	"64.5"	"0.9"	"73.4"	"82.7"	""	"778"	"57"	"35.000"	"28.000"	"7.48082682546052E-05"	""	"0"	"1.462E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"458.94962"	"1374.83429"	"1374.83569"	"-1.01"	"-0.00046"	"9/78"	"9"	"78"	"3757167.02453613"	"HCD"	"MS2"	"75.31087"	"122.4"	"100.000"	"53.3383"	"16676"	"16676"	"16650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.5"	""	"167.0"	""	"179.4"	""	"176.7"	""	"203.5"	"232.4"	""	"778"	"33"	"35.000"	"28.000"	"0.0206514048805855"	"24"	"0.0001991"	"0.002218"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"458.94968"	"1374.83448"	"1374.83569"	"-0.88"	"-0.00040"	"7/78"	"7"	"78"	"1640194.29840088"	"HCD"	"MS2"	"41.83424"	"58.8"	"100.000"	"53.4074"	"16738"	"16738"	"16712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.8"	""	"74.1"	""	"84.3"	""	"86.3"	""	"108.2"	"139.5"	""	"779"	"24"	"35.000"	"28.000"	"0.161252873342285"	"26"	"0.0001991"	"0.004385"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"687.92090"	"1374.83452"	"1374.83569"	"-0.85"	"-0.00058"	"8/78"	"8"	"78"	"1679166.21356201"	"HCD"	"MS2"	"7.401905"	"130.0"	"100.000"	"52.9475"	"16550"	"16550"	"16530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"221.9"	""	"205.6"	""	"180.8"	""	"206.3"	"0.8"	"206.9"	"206.8"	""	"779"	"64"	"35.000"	"28.000"	"1.73583108750827E-05"	""	"0"	"2.769E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"458.94971"	"1374.83457"	"1374.83569"	"-0.81"	"-0.00037"	"9/78"	"9"	"78"	"4299734.78009033"	"HCD"	"MS2"	"34.95419"	"137.5"	"100.000"	"53.0626"	"16597"	"16597"	"16577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.3"	""	"190.9"	""	"221.7"	""	"195.1"	"0.3"	"231.2"	"251.7"	""	"779"	"36"	"35.000"	"28.000"	"0.00930052494694682"	"28"	"0.0001686"	"0.001413"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"458.94977"	"1374.83475"	"1374.83569"	"-0.68"	"-0.00031"	"9/78"	"9"	"78"	"2906967.44628906"	"HCD"	"MS2"	"28.09419"	"102.0"	"100.000"	"53.6355"	"16797"	"16797"	"16777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.8"	""	"125.6"	""	"161.6"	""	"152.9"	""	"181.7"	"203.5"	""	"789"	"38"	"35.000"	"28.000"	"0.00608200828688601"	"27"	"0.0001686"	"0.001167"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.5116"	"0.0000"	"1"	"1"	"1"	"687.92108"	"1374.83489"	"1374.83569"	"-0.58"	"-0.00040"	"7/78"	"7"	"78"	"382146.874572754"	"HCD"	"MS2"	"53.76028"	"37.2"	"100.000"	"53.9228"	"16915"	"16915"	"16889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"39.6"	""	"54.7"	""	"64.9"	""	"66.2"	"75.9"	""	"789"	"43"	"35.000"	"28.000"	"0.00200931028632064"	""	"0"	"4.036E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7377"	"0.0000"	"1"	"1"	"1"	"687.92108"	"1374.83489"	"1374.83569"	"-0.58"	"-0.00040"	"8/78"	"8"	"78"	"4527048.08947754"	"HCD"	"MS2"	"0"	"305.9"	"100.000"	"53.2442"	"16672"	"16672"	"16657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"498.4"	""	"426.1"	""	"468.7"	""	"436.5"	"0.0"	"532.6"	"531.3"	""	"789"	"61"	"35.000"	"28.000"	"3.05525179233093E-05"	""	"0"	"2.862E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.6949"	"0.0000"	"1"	"1"	"1"	"687.92108"	"1374.83489"	"1374.83569"	"-0.58"	"-0.00040"	"8/78"	"8"	"78"	"4668340.96002197"	"HCD"	"MS2"	"0"	"311.2"	"100.000"	"53.5547"	"16764"	"16764"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"513.1"	"3.5"	"435.6"	""	"475.0"	""	"453.1"	""	"499.9"	"565.5"	""	"789"	"59"	"35.000"	"28.000"	"4.9322718742089E-05"	""	"0"	"3.465E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNVLAAAK"	"[K].eTNVLAAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"687.92145"	"1374.83562"	"1374.83569"	"-0.05"	"-0.00003"	"8/78"	"8"	"78"	"622709.410949707"	"HCD"	"MS2"	"15.19574"	"54.3"	"100.000"	"59.3158"	"19138"	"19138"	"19118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.7"	""	"71.2"	""	"74.7"	""	"89.0"	""	"107.1"	"97.3"	""	"788"	"57"	"35.000"	"28.000"	"8.82056128595926E-05"	"26"	"0"	"7.721E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNVLAAAK"	"[K].eTNVLAAAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"O08815"	"STE20-like serine/threonine-protein kinase OS=Rattus norvegicus OX=10116 GN=Slk PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"687.92151"	"1374.83574"	"1374.83569"	"0.04"	"0.00003"	"8/78"	"8"	"78"	"507924.577697754"	"HCD"	"MS2"	"16.68963"	"44.8"	"100.000"	"59.5826"	"19212"	"19212"	"19189"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"55.9"	""	"64.2"	""	"76.9"	""	"79.6"	"90.4"	""	"788"	"53"	"35.000"	"28.000"	"0.00020916847102701"	"21"	"0"	"0.0001085"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVELAANTK"	"[K].aVELAANTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"687.92169"	"1374.83611"	"1374.83569"	"0.31"	"0.00021"	"8/78"	"8"	"78"	"1415789.828125"	"HCD"	"MS2"	"16.19942"	"112.8"	"100.000"	"53.2600"	"16644"	"16644"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.7"	""	"162.0"	""	"158.8"	""	"187.8"	"0.0"	"172.5"	"192.0"	""	"788"	"59"	"35.000"	"28.000"	"5.12266813745117E-05"	"28"	"0"	"1.098E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KVTAQDVR"	"[K].kVTAQDVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"458.95346"	"1374.84583"	"1374.84692"	"-0.79"	"-0.00036"	"5/76"	"5"	"76"	"16610163.0164795"	"HCD"	"MS2"	"9.77123"	"694.9"	"76.490"	"27.3704"	"6200"	"6200"	"6186"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"975.8"	""	"866.6"	""	"894.2"	""	"1162.5"	"18.1"	"1321.2"	"1350.7"	""	"706"	"13"	"35.000"	"28.000"	"1.8271521167855"	"13"	"0.007752"	"0.09899"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDYLK"	"[K].eSYDYLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"688.37897"	"1375.75066"	"1375.75095"	"-0.21"	"-0.00015"	"4/54"	"4"	"54"	"1526095.57525635"	"HCD"	"MS2"	"0"	"133.1"	"100.000"	"66.2757"	"21930"	"21930"	"21909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.1"	""	"181.9"	""	"192.1"	""	"203.6"	"3.2"	"221.9"	"218.9"	""	"844"	"19"	"36.000"	"29.000"	"0.596090843830803"	"22"	"0.00307"	"0.03395"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDYLK"	"[K].eSYDYLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"688.37939"	"1375.75151"	"1375.75095"	"0.41"	"0.00028"	"6/54"	"6"	"54"	"2144330.42584229"	"HCD"	"MS2"	"0"	"177.1"	"100.000"	"66.5839"	"22085"	"22085"	"22076"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.9"	""	"229.2"	""	"271.3"	""	"252.2"	"1.8"	"309.7"	"311.3"	""	"887"	"26"	"36.000"	"29.000"	"0.109873668256036"	"22"	"0.00296"	"0.03191"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDYLK"	"[K].eSYDYLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"688.37946"	"1375.75163"	"1375.75095"	"0.50"	"0.00034"	"4/54"	"4"	"54"	"2082223.99810791"	"HCD"	"MS2"	"0"	"179.1"	"100.000"	"66.5667"	"22045"	"22045"	"22033"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"305.6"	""	"244.2"	""	"243.3"	""	"264.6"	""	"314.6"	"323.4"	""	"886"	"19"	"36.000"	"29.000"	"0.62575413226788"	"22"	"0.004213"	"0.04709"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDYLK"	"[K].eSYDYLk.[T]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"688.37958"	"1375.75188"	"1375.75095"	"0.67"	"0.00046"	"7/54"	"7"	"54"	"1652784.15789795"	"HCD"	"MS2"	"0"	"144.7"	"100.000"	"66.2998"	"21973"	"21973"	"21953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"257.6"	""	"201.8"	""	"206.7"	""	"213.9"	""	"231.6"	"257.8"	""	"884"	"20"	"36.000"	"29.000"	"0.397577931036275"	"20"	"0.004213"	"0.04771"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPEAFDPK"	"[R].gGPEAFDPk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"688.38312"	"1375.75896"	"1375.76219"	"-2.35"	"-0.00161"	"5/70"	"5"	"70"	"409865.153625488"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"56.7461"	"18091"	"18091"	"18069"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.7"	""	"55.4"	""	"46.7"	""	"68.8"	""	"76.1"	"81.4"	""	"950"	"32"	"36.000"	"29.000"	"0.0288864125607391"	"24"	"0.00504"	"0.06403"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPEAFDPK"	"[R].gGPEAFDPk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"688.38379"	"1375.76030"	"1375.76219"	"-1.37"	"-0.00094"	"6/70"	"6"	"70"	"347415.170043945"	"HCD"	"MS2"	"42.8559"	"33.8"	"100.000"	"57.2174"	"18248"	"18248"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"37.7"	""	"37.3"	""	"60.5"	""	"58.1"	"76.7"	""	"934"	"23"	"36.000"	"29.000"	"0.216928633529024"	"21"	"0.0065"	"0.08056"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPEAFDPK"	"[R].gGPEAFDPk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"P97878"	"Exocyst complex component 5 OS=Rattus norvegicus OX=10116 GN=Exoc5 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"688.38641"	"1375.76555"	"1375.76219"	"2.44"	"0.00168"	"6/70"	"6"	"70"	"462235.109191895"	"HCD"	"MS2"	"25.94308"	"43.6"	"100.000"	"56.9077"	"18122"	"18122"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"54.4"	""	"55.2"	""	"74.4"	""	"79.3"	"90.9"	""	"941"	"25"	"36.000"	"29.000"	"0.152953573419847"	"22"	"0.005799"	"0.07132"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPGELLGYR"	"[K].eLPGELLGYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"688.39215"	"1375.77703"	"1375.77828"	"-0.91"	"-0.00063"	"6/80"	"6"	"80"	"254501.589660645"	"HCD"	"MS2"	"22.57395"	"14.7"	"100.000"	"103.7754"	"37106"	"37106"	"37086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"16.9"	""	"24.2"	""	"25.8"	""	"20.8"	"38.0"	""	"1000"	"27"	"36.000"	"30.000"	"0.111421757463515"	"21"	"0.002711"	"0.02874"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLPDSDK"	"[K].gSVLPDSDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"688.39478"	"1375.78227"	"1375.78332"	"-0.76"	"-0.00052"	"12/76"	"12"	"76"	"1046324.95678711"	"HCD"	"MS2"	"25.07645"	"78.2"	"100.000"	"50.8404"	"15696"	"15696"	"15670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.1"	""	"79.8"	""	"77.1"	""	"165.7"	"0.1"	"168.5"	"164.1"	""	"1029"	"36"	"37.000"	"30.000"	"0.0141705066786749"	"26"	"0.0001991"	"0.003185"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLPDSDK"	"[K].gSVLPDSDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.3103"	"0.0000"	"1"	"1"	"1"	"688.39484"	"1375.78240"	"1375.78332"	"-0.67"	"-0.00046"	"6/76"	"6"	"76"	"983243.514099121"	"HCD"	"MS2"	"15.03921"	"72.4"	"100.000"	"51.1315"	"15781"	"15781"	"15763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.6"	""	"80.6"	""	"78.9"	""	"144.1"	""	"140.3"	"156.3"	""	"1030"	"29"	"37.000"	"30.000"	"0.0675782947994889"	""	"0.0005161"	"0.00649"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLENDLK"	"[R].eGLENDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"688.39490"	"1375.78252"	"1375.78332"	"-0.58"	"-0.00040"	"7/72"	"7"	"72"	"1789166.6083374"	"HCD"	"MS2"	"19.96923"	"147.9"	"100.000"	"60.4027"	"19578"	"19578"	"19564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.9"	""	"148.5"	""	"201.7"	""	"290.8"	"0.1"	"270.3"	"248.6"	""	"1030"	"41"	"37.000"	"30.000"	"0.00436322118282407"	"28"	"9.9E-05"	"0.0008516"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGLENDLK"	"[R].eGLENDLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"Q9QZA2"	"Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"688.39508"	"1375.78288"	"1375.78332"	"-0.31"	"-0.00022"	"12/72"	"12"	"72"	"1825492.74578857"	"HCD"	"MS2"	"20.72291"	"144.1"	"100.000"	"60.5499"	"19605"	"19605"	"19588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.7"	""	"164.4"	""	"169.8"	""	"267.8"	""	"267.8"	"271.7"	""	"1024"	"34"	"37.000"	"30.000"	"0.0221957569734415"	"27"	"0.0001991"	"0.003067"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLPDSDK"	"[K].gSVLPDSDk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"688.39655"	"1375.78581"	"1375.78332"	"1.82"	"0.00125"	"6/76"	"6"	"76"	"770784.329223633"	"HCD"	"MS2"	"38.66399"	"56.9"	"100.000"	"50.9935"	"15725"	"15725"	"15701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.5"	""	"70.3"	""	"58.5"	""	"108.8"	"0.0"	"113.4"	"114.8"	""	"997"	"11"	"36.000"	"29.000"	"3.98717376121004"	"22"	"0.007412"	"0.09409"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EHYIDLK"	"[K].eHYIDLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"1"	""	""	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"459.27054"	"1375.79706"	"1375.79857"	"-1.10"	"-0.00050"	"10/56"	"10"	"56"	"5063109.06707764"	"HCD"	"MS2"	"31.06507"	"133.6"	"100.000"	"52.7539"	"16471"	"16471"	"16452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.2"	""	"128.6"	""	"182.0"	""	"245.0"	""	"258.6"	"267.6"	""	"972"	"22"	"36.000"	"29.000"	"0.29966517090468"	"24"	"0.001615"	"0.01465"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QHYIDLK"	"[K].qHYIDLk.[D]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"459.27054"	"1375.79706"	"1375.79857"	"-1.10"	"-0.00050"	"10/60"	"10"	"60"	"5063109.06707764"	"HCD"	"MS2"	"31.06507"	"133.6"	"100.000"	"52.7539"	"16471"	"16471"	"16452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.2"	""	"128.6"	""	"182.0"	""	"245.0"	""	"258.6"	"267.6"	""	"972"	"22"	"36.000"	"29.000"	"0.29966517090468"	"24"	"0.001615"	"0.01465"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"EHYIDLK"	"[K].eHYIDLk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"0"	"1"	""	""	"Q05982"	"Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"459.27084"	"1375.79798"	"1375.79857"	"-0.43"	"-0.00020"	"9/56"	"9"	"56"	"4855206.43707275"	"HCD"	"MS2"	"25.94509"	"146.9"	"100.000"	"53.0901"	"16574"	"16574"	"16554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.5"	""	"160.0"	""	"190.9"	""	"261.0"	""	"275.1"	"300.0"	""	"966"	"26"	"36.000"	"29.000"	"0.134569652444818"	"23"	"0.001348"	"0.01115"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QHYIDLK"	"[K].qHYIDLk.[D]"	"N-Term(TMT6plex); Q1(Deamidated); K7(TMT6plex)"	"1"	"1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"459.27084"	"1375.79798"	"1375.79857"	"-0.43"	"-0.00020"	"9/60"	"9"	"60"	"4855206.43707275"	"HCD"	"MS2"	"25.94509"	"146.9"	"100.000"	"53.0901"	"16574"	"16574"	"16554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.5"	""	"160.0"	""	"190.9"	""	"261.0"	""	"275.1"	"300.0"	""	"966"	"26"	"36.000"	"29.000"	"0.134569652444818"	"23"	"0.001348"	"0.01115"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"688.41168"	"1375.81609"	"1375.81970"	"-2.63"	"-0.00181"	"12/74"	"12"	"74"	"584050.798583984"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"46.2998"	"13854"	"13854"	"13840"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.6"	""	"67.7"	""	"68.9"	""	"77.9"	""	"89.4"	"103.0"	""	"963"	"33"	"36.000"	"29.000"	"0.0238559266872507"	"21"	"0.0001991"	"0.003244"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"688.41187"	"1375.81645"	"1375.81970"	"-2.36"	"-0.00162"	"7/74"	"7"	"74"	"1466711.10150146"	"HCD"	"MS2"	"0"	"116.4"	"100.000"	"46.3412"	"13838"	"13838"	"13825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.3"	""	"152.4"	""	"157.4"	""	"191.0"	""	"218.6"	"214.6"	""	"963"	"48"	"36.000"	"29.000"	"0.000829079718855762"	"26"	"9.9E-05"	"0.0007231"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"688.41217"	"1375.81706"	"1375.81970"	"-1.92"	"-0.00132"	"7/74"	"7"	"74"	"1606823.5657959"	"HCD"	"MS2"	"0"	"126.7"	"100.000"	"46.0249"	"13745"	"13745"	"13717"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.0"	""	"166.4"	""	"183.1"	""	"189.2"	"0.4"	"224.4"	"232.2"	""	"931"	"49"	"36.000"	"29.000"	"0.000536932491515718"	"26"	"9.9E-05"	"0.0007861"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVVDQEK"	"[K].lSVVDQEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"688.41223"	"1375.81719"	"1375.81970"	"-1.83"	"-0.00126"	"11/70"	"11"	"70"	"1134479.32836914"	"HCD"	"MS2"	"32.4849"	"96.5"	"100.000"	"63.1979"	"20679"	"20679"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.8"	""	"98.0"	""	"86.8"	""	"93.3"	""	"109.8"	"385.5"	""	"931"	"28"	"36.000"	"29.000"	"0.0754952600320582"	""	"0.0001991"	"0.003275"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"688.41235"	"1375.81743"	"1375.81970"	"-1.65"	"-0.00114"	"6/74"	"6"	"74"	"518533.88470459"	"HCD"	"MS2"	"100"	"52.0"	"100.000"	"46.6358"	"13953"	"13953"	"13937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.3"	""	"69.8"	""	"63.0"	""	"79.2"	""	"99.2"	"103.1"	""	"931"	"18"	"36.000"	"29.000"	"0.727645227649364"	"20"	"0.0001991"	"0.005669"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"688.41248"	"1375.81767"	"1375.81970"	"-1.47"	"-0.00101"	"8/70"	"8"	"70"	"1658178.31695557"	"HCD"	"MS2"	"33.96319"	"139.1"	"100.000"	"66.9372"	"22227"	"22227"	"22203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.8"	""	"191.5"	""	"195.8"	""	"214.3"	"1.5"	"220.8"	"237.8"	""	"931"	"55"	"36.000"	"29.000"	"0.000139289918834111"	"28"	"0"	"7.806E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"688.41284"	"1375.81841"	"1375.81970"	"-0.94"	"-0.00065"	"13/70"	"13"	"70"	"1014671.19696045"	"HCD"	"MS2"	"57.73111"	"95.3"	"100.000"	"66.8443"	"22157"	"22157"	"22134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.4"	""	"132.6"	""	"124.5"	""	"155.3"	""	"155.5"	"164.0"	""	"929"	"41"	"36.000"	"29.000"	"0.00370668532235976"	"24"	"0"	"0.0001102"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETVQAK"	"[R].lEETVQAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"688.41290"	"1375.81853"	"1375.81970"	"-0.85"	"-0.00059"	"14/64"	"14"	"64"	"1407182.27423096"	"HCD"	"MS2"	"8.625961"	"122.7"	"100.000"	"54.5282"	"17161"	"17161"	"17142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"195.5"	""	"117.2"	""	"119.0"	""	"228.0"	""	"255.9"	"251.9"	""	"929"	"44"	"36.000"	"29.000"	"0.00178642882760067"	"26"	"9.9E-05"	"0.0009476"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETVQAK"	"[R].lEETVQAk.[-]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"688.41296"	"1375.81865"	"1375.81970"	"-0.76"	"-0.00053"	"14/64"	"14"	"64"	"1565161.49658203"	"HCD"	"MS2"	"18.7781"	"137.5"	"100.000"	"54.2198"	"17069"	"17069"	"17047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"189.5"	""	"137.2"	""	"148.4"	""	"238.6"	""	"295.7"	"300.2"	""	"929"	"46"	"36.000"	"29.000"	"0.00111682652060322"	""	"0.0001686"	"0.00164"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"459.27774"	"1375.81867"	"1375.81970"	"-0.75"	"-0.00034"	"7/70"	"7"	"70"	"2963898.17816162"	"HCD"	"MS2"	"3.288986"	"114.1"	"100.000"	"67.3771"	"22405"	"22405"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.5"	""	"141.9"	""	"158.7"	""	"178.1"	""	"199.5"	"225.2"	""	"931"	"40"	"36.000"	"29.000"	"0.00452813832668178"	"25"	"9.9E-05"	"0.0006539"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAENITK"	"[R].eIAENITk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.1364"	"0.0000"	"1"	"1"	"1"	"688.41309"	"1375.81890"	"1375.81970"	"-0.59"	"-0.00040"	"7/74"	"7"	"74"	"1847188.63330078"	"HCD"	"MS2"	"21.18279"	"138.1"	"100.000"	"58.9428"	"18986"	"18986"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"206.2"	""	"175.1"	""	"179.9"	""	"237.9"	"0.1"	"258.8"	"250.0"	""	"945"	"44"	"36.000"	"29.000"	"0.00171949854570105"	""	"9.9E-05"	"0.0009854"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"688.41321"	"1375.81914"	"1375.81970"	"-0.41"	"-0.00028"	"7/74"	"7"	"74"	"1089192.60870361"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"46.0679"	"13728"	"13728"	"13700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.0"	""	"125.2"	""	"117.8"	""	"147.0"	"2.7"	"139.7"	"158.1"	""	"945"	"49"	"36.000"	"29.000"	"0.000600346264711036"	"26"	"9.9E-05"	"0.0006138"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"688.41321"	"1375.81914"	"1375.81970"	"-0.41"	"-0.00028"	"8/70"	"8"	"70"	"9855688.91693115"	"HCD"	"MS2"	"0"	"691.7"	"91.980"	"67.2527"	"22354"	"22354"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1196.5"	""	"881.1"	""	"1019.1"	""	"1073.6"	"1.8"	"1160.2"	"1209.4"	""	"945"	"58"	"36.000"	"29.000"	"8.24900967254938E-05"	"28"	"0"	"0.0002684"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"688.41339"	"1375.81951"	"1375.81970"	"-0.14"	"-0.00010"	"8/70"	"8"	"70"	"1207579.37536621"	"HCD"	"MS2"	"6.648337"	"101.4"	"100.000"	"67.7283"	"22516"	"22516"	"22499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.9"	""	"132.6"	""	"148.8"	""	"157.6"	"0.0"	"174.4"	"195.3"	""	"943"	"55"	"36.000"	"29.000"	"0.000160502461444022"	"27"	"0"	"4.746E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVVDQEK"	"[K].lSVVDQEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.1304"	"0.0000"	"1"	"1"	"1"	"688.41345"	"1375.81963"	"1375.81970"	"-0.05"	"-0.00004"	"7/70"	"7"	"70"	"1132084.65673828"	"HCD"	"MS2"	"34.76244"	"96.1"	"100.000"	"63.1228"	"20680"	"20680"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.0"	""	"87.0"	""	"95.5"	""	"81.3"	"3.0"	"111.2"	"395.1"	""	"959"	"23"	"36.000"	"29.000"	"0.224279000247211"	""	"0.0001991"	"0.003136"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"688.41351"	"1375.81975"	"1375.81970"	"0.03"	"0.00002"	"8/70"	"8"	"70"	"4795463.53424072"	"HCD"	"MS2"	"1.069938"	"355.9"	"100.000"	"67.5428"	"22472"	"22472"	"22457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"546.0"	""	"439.2"	""	"526.1"	""	"575.1"	""	"601.1"	"686.1"	""	"959"	"58"	"36.000"	"29.000"	"8.52684977113663E-05"	"28"	"0"	"0.0001085"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"688.41351"	"1375.81975"	"1375.81970"	"0.03"	"0.00002"	"8/70"	"8"	"70"	"7757531.93029785"	"HCD"	"MS2"	"0.8641112"	"582.4"	"100.000"	"67.1204"	"22270"	"22270"	"22255"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1008.1"	""	"771.5"	""	"816.1"	""	"928.7"	"1.9"	"969.2"	"1012.7"	""	"959"	"58"	"36.000"	"29.000"	"8.33275497385325E-05"	"25"	"0"	"0.000149"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQEEIVAK"	"[R].tQEEIVAk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"688.41357"	"1375.81987"	"1375.81970"	"0.12"	"0.00009"	"7/74"	"7"	"74"	"694943.092895508"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"45.6802"	"13604"	"13604"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.5"	""	"82.5"	""	"75.0"	""	"100.3"	""	"109.9"	"119.5"	""	"959"	"42"	"36.000"	"29.000"	"0.00298392986738612"	"26"	"9.9E-05"	"0.0007409"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"688.41357"	"1375.81987"	"1375.81970"	"0.12"	"0.00009"	"8/70"	"8"	"70"	"7002257.85760498"	"HCD"	"MS2"	"0.6799532"	"494.7"	"100.000"	"67.4198"	"22392"	"22392"	"22375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"800.2"	""	"642.6"	""	"706.7"	""	"780.3"	""	"840.2"	"917.2"	""	"959"	"58"	"36.000"	"29.000"	"8.19952343585792E-05"	"25"	"0"	"5.586E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"459.27832"	"1375.82041"	"1375.81970"	"0.51"	"0.00024"	"7/70"	"7"	"70"	"1192938.8571167"	"HCD"	"MS2"	"13.45527"	"49.9"	"100.000"	"67.5993"	"22464"	"22464"	"22441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.1"	""	"58.8"	""	"59.6"	""	"83.5"	""	"101.1"	"104.7"	""	"915"	"30"	"36.000"	"29.000"	"0.0512142831686222"	"14"	"9.9E-05"	"0.0009002"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAENITK"	"[R].eIAENITk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"P40329"	"Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Rars PE=1 SV=2"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"688.41388"	"1375.82048"	"1375.81970"	"0.57"	"0.00039"	"7/74"	"7"	"74"	"1784807.3526001"	"HCD"	"MS2"	"17.85619"	"131.8"	"100.000"	"59.1638"	"19041"	"19041"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.8"	""	"165.1"	""	"172.9"	""	"235.4"	""	"250.8"	"235.0"	""	"915"	"42"	"36.000"	"29.000"	"0.0028470238046489"	""	"9.9E-05"	"0.0006921"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVTADDVK"	"[K].lGVTADDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"459.27841"	"1375.82068"	"1375.81970"	"0.71"	"0.00033"	"7/70"	"7"	"70"	"799255.305175781"	"HCD"	"MS2"	"16.74399"	"36.8"	"100.000"	"67.6949"	"22534"	"22534"	"22509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.4"	""	"47.0"	""	"48.2"	""	"63.4"	""	"74.9"	"72.9"	""	"915"	"35"	"36.000"	"29.000"	"0.0147024969642795"	"21"	"0.0001991"	"0.00236"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYDGDGYK"	"[R].tYDGDGYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q566C7"	"Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nudt3 PE=1 SV=1"	"Q566C7"	"Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nudt3 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"688.85663"	"1376.70598"	"1376.70982"	"-2.79"	"-0.00192"	"6/64"	"6"	"64"	"604528.52532959"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"42.5799"	"12306"	"12306"	"12286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.5"	""	"72.1"	""	"84.6"	""	"92.5"	"1.6"	"112.1"	"132.1"	""	"723"	"25"	"35.000"	"28.000"	"0.119153910952151"	"17"	"0.004852"	"0.05989"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLGFGGPDTR"	"[R].eVLGFGGPDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"688.87079"	"1376.73430"	"1376.73715"	"-2.07"	"-0.00142"	"5/98"	"5"	"98"	"1608887.62121582"	"HCD"	"MS2"	"30.71268"	"77.8"	"100.000"	"77.5119"	"26482"	"26482"	"26465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.7"	""	"111.4"	""	"110.5"	""	"119.4"	""	"139.4"	"141.8"	""	"914"	"34"	"36.000"	"29.000"	"0.018746327506488"	""	"0"	"0.000286"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLGFGGPDTR"	"[R].eVLGFGGPDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"688.87097"	"1376.73467"	"1376.73715"	"-1.80"	"-0.00124"	"12/98"	"12"	"98"	"563896.543823242"	"HCD"	"MS2"	"46.60453"	"30.6"	"100.000"	"77.2114"	"26362"	"26362"	"26345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.4"	""	"39.5"	""	"41.9"	""	"39.8"	""	"59.6"	"66.8"	""	"905"	"10"	"36.000"	"29.000"	"4.1746357078753"	"18"	"0.0001991"	"0.005758"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLGFGGPDTR"	"[R].eVLGFGGPDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"Q99JE6"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Rattus norvegicus OX=10116 GN=Plcb3 PE=1 SV=2"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"688.87256"	"1376.73784"	"1376.73715"	"0.51"	"0.00035"	"8/98"	"8"	"98"	"961240.317932129"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"77.4067"	"26469"	"26469"	"26455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.3"	""	"62.1"	""	"64.7"	""	"70.5"	"1.9"	"90.2"	"85.8"	""	"971"	"41"	"36.000"	"29.000"	"0.00416091873859344"	""	"0"	"7.317E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"688.88123"	"1376.75517"	"1376.75827"	"-2.25"	"-0.00155"	"10/88"	"10"	"88"	"1291373.4463501"	"HCD"	"MS2"	"38.22423"	"77.8"	"100.000"	"65.3577"	"21555"	"21555"	"21535"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.4"	""	"112.4"	""	"98.7"	""	"129.3"	""	"152.0"	"131.4"	""	"1073"	"55"	"37.000"	"30.000"	"0.000159797406438876"	""	"0"	"1.141E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7571"	"0.0000"	"1"	"1"	"1"	"688.88208"	"1376.75688"	"1376.75827"	"-1.01"	"-0.00070"	"9/88"	"9"	"88"	"5615514.23339844"	"HCD"	"MS2"	"0"	"249.7"	"100.000"	"65.9507"	"21831"	"21831"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"355.9"	""	"315.4"	""	"371.3"	""	"380.2"	""	"466.1"	"477.9"	""	"1083"	"70"	"37.000"	"30.000"	"5.95111662052709E-06"	""	"0"	"6.573E-07"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.5577"	"0.0000"	"1"	"1"	"1"	"688.88275"	"1376.75823"	"1376.75827"	"-0.04"	"-0.00002"	"9/88"	"9"	"88"	"1294061.55847168"	"HCD"	"MS2"	"35.67312"	"83.3"	"100.000"	"65.3539"	"21587"	"21587"	"21568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.1"	""	"112.8"	""	"117.7"	""	"121.2"	""	"169.9"	"151.3"	""	"1112"	"52"	"37.000"	"30.000"	"0.000384658019830928"	""	"0"	"5.428E-07"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7123"	"0.0000"	"1"	"1"	"1"	"688.88275"	"1376.75823"	"1376.75827"	"-0.04"	"-0.00002"	"9/88"	"9"	"88"	"9482556.41650391"	"HCD"	"MS2"	"0.5546728"	"433.7"	"100.000"	"65.6558"	"21711"	"21711"	"21696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"612.3"	""	"580.5"	""	"648.5"	""	"699.9"	"2.3"	"770.3"	"793.0"	""	"1112"	"73"	"37.000"	"30.000"	"2.90452281083511E-06"	""	"0"	"5.569E-07"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7206"	"0.0000"	"1"	"1"	"1"	"688.88281"	"1376.75835"	"1376.75827"	"0.05"	"0.00004"	"9/88"	"9"	"88"	"9669668.10003662"	"HCD"	"MS2"	"0.2753956"	"451.4"	"100.000"	"65.6522"	"21676"	"21676"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"639.8"	""	"626.7"	""	"668.6"	""	"699.5"	""	"833.1"	"814.0"	""	"1109"	"68"	"37.000"	"30.000"	"9.01366785063643E-06"	""	"0"	"6.672E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTDDSTLIR"	"[K].gLGTDDSTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.7821"	"0.0000"	"1"	"1"	"1"	"688.88287"	"1376.75847"	"1376.75827"	"0.14"	"0.00010"	"10/88"	"10"	"88"	"4763182.83648682"	"HCD"	"MS2"	"0"	"221.5"	"100.000"	"65.9610"	"21802"	"21802"	"21785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"300.4"	""	"285.7"	""	"339.9"	""	"331.5"	"0.4"	"427.1"	"413.9"	""	"1114"	"78"	"37.000"	"30.000"	"8.80755157873602E-07"	""	"0"	"2.652E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"688.89008"	"1376.77287"	"1376.77353"	"-0.48"	"-0.00033"	"7/100"	"7"	"100"	"403151.202270508"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"96.0502"	"33966"	"33966"	"33945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.5"	""	"22.0"	""	"27.7"	""	"45.0"	""	"48.7"	"42.4"	""	"1105"	"43"	"37.000"	"30.000"	"0.00309266074826048"	"25"	"0"	"0.0001115"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7091"	"0.0000"	"1"	"1"	"1"	"688.89032"	"1376.77336"	"1376.77353"	"-0.12"	"-0.00008"	"7/100"	"7"	"100"	"800479.244750977"	"HCD"	"MS2"	"1.270318"	"42.0"	"100.000"	"95.9990"	"33977"	"33977"	"33963"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.2"	""	"54.9"	""	"54.8"	""	"72.6"	"1.0"	"73.4"	"88.9"	""	"1112"	"55"	"37.000"	"30.000"	"0.000173011428343094"	""	"0"	"1.105E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"688.89032"	"1376.77336"	"1376.77353"	"-0.12"	"-0.00008"	"5/100"	"5"	"100"	"862464.213684082"	"HCD"	"MS2"	"72.16457"	"54.2"	"100.000"	"95.6876"	"33852"	"33852"	"33836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.5"	""	"58.0"	""	"57.1"	""	"99.3"	"0.6"	"114.4"	"116.1"	""	"1112"	"26"	"37.000"	"30.000"	"0.148277341747394"	"22"	"9.9E-05"	"0.0008699"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDLFVNIR"	"[K].aAEDLFVNIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"688.89038"	"1376.77349"	"1376.77353"	"-0.03"	"-0.00002"	"7/78"	"7"	"78"	"329141.523803711"	"HCD"	"MS2"	"35.22418"	"18.0"	"100.000"	"102.2389"	"36496"	"36496"	"36475"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"26.6"	""	"23.8"	""	"31.8"	""	"35.7"	"31.9"	""	"1114"	"50"	"37.000"	"30.000"	"0.000504493058700298"	"22"	"0"	"5.308E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDLFVNIR"	"[K].aAEDLFVNIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"P55161"	"Nck-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Nckap1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"688.89038"	"1376.77349"	"1376.77353"	"-0.03"	"-0.00002"	"8/78"	"8"	"78"	"352732.828369141"	"HCD"	"MS2"	"39.96218"	"19.4"	"100.000"	"102.0308"	"36388"	"36388"	"36369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"23.1"	""	"32.1"	""	"31.0"	""	"35.7"	"41.2"	""	"1114"	"48"	"37.000"	"30.000"	"0.000792237134427411"	"23"	"0"	"5.705E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTSLEPVAFR"	"[R].qTSLEPVAFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"688.89038"	"1376.77349"	"1376.77353"	"-0.03"	"-0.00002"	"5/96"	"5"	"96"	"452856.254760742"	"HCD"	"MS2"	"28.5836"	"30.6"	"100.000"	"71.8353"	"24185"	"24185"	"24161"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"36.7"	"2.0"	"40.3"	""	"44.5"	""	"57.6"	"66.0"	""	"1114"	"8"	"37.000"	"30.000"	"9.20142721613562"	"16"	"0.004392"	"0.052"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLAIAEFAR"	"[R].eQLAIAEFAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"P28480"	"T-complex protein 1 subunit alpha OS=Rattus norvegicus OX=10116 GN=Tcp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"688.89038"	"1376.77349"	"1376.77353"	"-0.03"	"-0.00002"	"7/100"	"7"	"100"	"1291078.20281982"	"HCD"	"MS2"	"44.02021"	"72.1"	"100.000"	"95.7430"	"33841"	"33841"	"33824"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.0"	""	"90.9"	""	"76.6"	""	"144.9"	""	"144.6"	"127.1"	""	"1114"	"54"	"37.000"	"30.000"	"0.000210307710345457"	"30"	"0"	"1.383E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEAIQLR"	"[K].rFDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"1"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"459.59909"	"1376.78272"	"1376.78476"	"-1.49"	"-0.00068"	"7/82"	"7"	"82"	"559694.069763184"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"59.7945"	"19298"	"19298"	"19274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"24.7"	""	"24.8"	""	"26.0"	""	"46.6"	"45.8"	""	"1058"	"40"	"37.000"	"30.000"	"0.00565530031108785"	"22"	"0.0001686"	"0.001792"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEAIQLR"	"[K].rFDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"1"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"459.59918"	"1376.78299"	"1376.78476"	"-1.29"	"-0.00059"	"8/82"	"8"	"82"	"2987730.67877197"	"HCD"	"MS2"	"8.372291"	"58.7"	"100.000"	"59.4952"	"19176"	"19176"	"19157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.2"	""	"72.6"	""	"80.5"	""	"95.5"	"2.9"	"113.4"	"105.2"	""	"1058"	"54"	"37.000"	"30.000"	"0.000221541795947379"	"26"	"0"	"0.0001886"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEAIQLR"	"[K].rFDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"1"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"459.59921"	"1376.78308"	"1376.78476"	"-1.22"	"-0.00056"	"7/82"	"7"	"82"	"716260.749694824"	"HCD"	"MS2"	"15.57508"	"22.4"	"100.000"	"59.5964"	"19251"	"19251"	"19227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.1"	""	"24.1"	""	"28.7"	""	"42.3"	""	"40.1"	"44.5"	""	"1058"	"45"	"37.000"	"30.000"	"0.00165750814816294"	"23"	"0"	"5.705E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDEAIQLR"	"[K].rFDEAIQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"P30835"	"ATP-dependent 6-phosphofructokinase, liver type OS=Rattus norvegicus OX=10116 GN=Pfkl PE=1 SV=3"	"1"	"3"	"3"	"0.8704"	"0.0000"	"1"	"1"	"1"	"459.59933"	"1376.78345"	"1376.78476"	"-0.95"	"-0.00044"	"8/82"	"8"	"82"	"2922874.04058838"	"HCD"	"MS2"	"50.7239"	"57.9"	"100.000"	"59.2788"	"19123"	"19123"	"19104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.1"	""	"70.8"	""	"78.5"	""	"91.1"	""	"108.2"	"111.3"	""	"1051"	"54"	"37.000"	"30.000"	"0.00020586035642014"	"23"	"0"	"4.497E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"459.60577"	"1376.80277"	"1376.80372"	"-0.69"	"-0.00032"	"6/62"	"6"	"62"	"1882981.70123291"	"HCD"	"MS2"	"44.74379"	"84.5"	"100.000"	"72.8007"	"24573"	"24573"	"24554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.3"	""	"96.1"	""	"108.8"	""	"147.0"	"1.6"	"157.5"	"157.5"	""	"864"	"42"	"36.000"	"29.000"	"0.00254380459113615"	""	"0.0001686"	"0.001304"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"688.90503"	"1376.80278"	"1376.80372"	"-0.68"	"-0.00047"	"7/62"	"7"	"62"	"3700801.89263916"	"HCD"	"MS2"	"5.43405"	"274.0"	"100.000"	"72.6786"	"24524"	"24524"	"24509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"426.0"	""	"317.0"	""	"364.3"	""	"477.0"	"3.7"	"504.3"	"502.9"	""	"864"	"42"	"36.000"	"29.000"	"0.00252048285046258"	""	"0.0001991"	"0.002395"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"459.60583"	"1376.80295"	"1376.80372"	"-0.56"	"-0.00026"	"6/62"	"6"	"62"	"1836900.79400635"	"HCD"	"MS2"	"45.27417"	"80.1"	"100.000"	"72.8550"	"24625"	"24625"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.1"	""	"93.7"	""	"112.3"	""	"139.4"	"2.0"	"154.9"	"143.2"	""	"864"	"33"	"36.000"	"29.000"	"0.0220030936296708"	""	"0.0001991"	"0.004599"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"688.90521"	"1376.80315"	"1376.80372"	"-0.41"	"-0.00028"	"14/62"	"14"	"62"	"4913853.55004883"	"HCD"	"MS2"	"10.10559"	"399.1"	"100.000"	"73.0697"	"24713"	"24713"	"24696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"558.5"	""	"460.4"	""	"484.6"	""	"742.1"	""	"732.4"	"808.5"	""	"864"	"45"	"36.000"	"29.000"	"0.00139150171783444"	""	"0.0001686"	"0.001957"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"688.90527"	"1376.80327"	"1376.80372"	"-0.32"	"-0.00022"	"6/62"	"6"	"62"	"2682804.77575684"	"HCD"	"MS2"	"100"	"185.6"	"100.000"	"72.9968"	"24653"	"24653"	"24634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.2"	""	"232.7"	""	"249.1"	""	"309.3"	""	"366.2"	"351.9"	""	"854"	"4"	"36.000"	"29.000"	"19.0733893848461"	"14"	"0.002711"	"0.02904"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.90540"	"1376.80351"	"1376.80372"	"-0.15"	"-0.00010"	"7/62"	"7"	"62"	"2442316.84838867"	"HCD"	"MS2"	"64.19276"	"163.9"	"100.000"	"73.1156"	"24731"	"24731"	"24712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.5"	""	"209.2"	""	"232.3"	""	"263.7"	""	"312.8"	"328.2"	""	"861"	"5"	"36.000"	"29.000"	"14.0272699781365"	"13"	"0.002559"	"0.02546"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDSDLK"	"[K].vLEDSDLk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"688.90564"	"1376.80400"	"1376.80372"	"0.21"	"0.00014"	"7/62"	"7"	"62"	"3647457.54156494"	"HCD"	"MS2"	"7.641455"	"267.9"	"100.000"	"72.7560"	"24585"	"24585"	"24568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"410.0"	""	"323.1"	""	"340.9"	""	"466.0"	""	"498.9"	"502.3"	""	"857"	"42"	"36.000"	"29.000"	"0.00243192863417562"	""	"9.9E-05"	"0.00096"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQVEQSK"	"[K].tVQVEQSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"688.90961"	"1376.81194"	"1376.81495"	"-2.19"	"-0.00151"	"7/78"	"7"	"78"	"552507.679443359"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"37.7444"	"10346"	"10346"	"10325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"64.0"	""	"65.5"	""	"73.0"	""	"88.1"	"101.4"	""	"723"	"42"	"35.000"	"28.000"	"0.00223927948640257"	""	"9.9E-05"	"0.0008121"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQVEQSK"	"[K].tVQVEQSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5814"	"0.0000"	"1"	"1"	"1"	"688.91028"	"1376.81328"	"1376.81495"	"-1.21"	"-0.00084"	"7/78"	"7"	"78"	"681640.577087402"	"HCD"	"MS2"	"15.15038"	"60.6"	"100.000"	"37.6269"	"10334"	"10334"	"10317"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.6"	""	"81.3"	""	"71.3"	""	"91.9"	"0.2"	"115.3"	"112.5"	""	"698"	"43"	"35.000"	"28.000"	"0.00184852541918189"	""	"0.0001686"	"0.001032"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSESQVK"	"[K].qLSESQVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"688.91046"	"1376.81365"	"1376.81495"	"-0.95"	"-0.00065"	"7/74"	"7"	"74"	"1278342.01409912"	"HCD"	"MS2"	"0"	"110.0"	"100.000"	"41.2251"	"11793"	"11793"	"11766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.8"	"2.8"	"129.7"	""	"125.8"	""	"186.2"	""	"205.8"	"211.3"	""	"691"	"53"	"35.000"	"28.000"	"0.000180903950840377"	""	"9.9E-05"	"0.00062"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLSESQVK"	"[K].qLSESQVk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"688.91064"	"1376.81401"	"1376.81495"	"-0.68"	"-0.00047"	"7/74"	"7"	"74"	"1237744.95532227"	"HCD"	"MS2"	"0"	"100.2"	"100.000"	"41.3585"	"11809"	"11809"	"11786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.2"	""	"113.8"	""	"137.7"	""	"155.8"	"0.1"	"186.8"	"194.7"	""	"700"	"53"	"35.000"	"28.000"	"0.000171422586778956"	""	"9.9E-05"	"0.0005779"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQVEQSK"	"[K].tVQVEQSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"688.91071"	"1376.81413"	"1376.81495"	"-0.59"	"-0.00041"	"7/78"	"7"	"78"	"2692489.20495605"	"HCD"	"MS2"	"0"	"203.9"	"100.000"	"37.3433"	"10221"	"10221"	"10200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"346.6"	""	"241.2"	""	"275.2"	""	"343.0"	""	"363.8"	"363.9"	""	"700"	"44"	"35.000"	"28.000"	"0.00146915644396853"	""	"0.0001686"	"0.001186"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQVEQSK"	"[K].tVQVEQSk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"688.91083"	"1376.81438"	"1376.81495"	"-0.42"	"-0.00029"	"7/78"	"7"	"78"	"2652992.05670166"	"HCD"	"MS2"	"5.933095"	"202.4"	"100.000"	"37.4417"	"10224"	"10224"	"10203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"327.2"	""	"261.8"	""	"257.4"	""	"337.8"	""	"346.3"	"388.1"	""	"700"	"42"	"35.000"	"28.000"	"0.00238269275542809"	""	"0.0001991"	"0.001998"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLmHEk.[I]"	"N-Term(Prot)(Acetyl); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"689.35486"	"1377.70244"	"1377.70340"	"-0.70"	"-0.00048"	"6/88"	"6"	"88"	"2268380.8649292"	"HCD"	"MS2"	"58.04747"	"93.5"	"100.000"	"67.6592"	"22488"	"22488"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.1"	""	"113.2"	""	"124.3"	""	"181.9"	""	"182.1"	"171.2"	""	"742"	"22"	"35.000"	"28.000"	"0.211530945016157"	"17"	"0.001718"	"0.01514"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNFLMHEK"	"[M].aTNFLmHEk.[I]"	"N-Term(Prot)(Acetyl); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"689.35553"	"1377.70378"	"1377.70340"	"0.28"	"0.00019"	"7/88"	"7"	"88"	"2096620.48303223"	"HCD"	"MS2"	"54.53884"	"108.2"	"100.000"	"67.6857"	"22530"	"22530"	"22509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.2"	""	"128.0"	""	"156.6"	""	"204.2"	""	"211.0"	"190.8"	""	"757"	"25"	"35.000"	"28.000"	"0.108409136160964"	"18"	"0.001453"	"0.0118"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITESEEVVSR"	"[R].iTESEEVVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"689.37347"	"1377.73967"	"1377.74229"	"-1.90"	"-0.00131"	"13/86"	"13"	"86"	"484387.566101074"	"HCD"	"MS2"	"38.22345"	"41.9"	"100.000"	"46.5656"	"13960"	"13960"	"13938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.1"	""	"56.0"	""	"43.0"	""	"67.6"	"0.1"	"87.0"	"89.1"	""	"945"	"19"	"36.000"	"29.000"	"0.611507535085118"	"21"	"0.002189"	"0.02137"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTAVLTEK"	"[K].gTTAVLTEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"459.94949"	"1377.83393"	"1377.83535"	"-1.03"	"-0.00047"	"7/76"	"7"	"76"	"2691717.13000488"	"HCD"	"MS2"	"45.78735"	"115.8"	"100.000"	"52.2591"	"16269"	"16269"	"16246"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.5"	""	"156.4"	""	"157.7"	""	"185.6"	"1.7"	"209.3"	"214.6"	""	"630"	"13"	"34.000"	"27.000"	"1.59334768530981"	"20"	"0.001718"	"0.01502"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTAVLTEK"	"[K].gTTAVLTEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.5965"	"0.0000"	"1"	"1"	"1"	"689.42084"	"1377.83440"	"1377.83535"	"-0.69"	"-0.00048"	"8/76"	"8"	"76"	"1725568.09112549"	"HCD"	"MS2"	"18.02631"	"136.4"	"100.000"	"52.1436"	"16222"	"16222"	"16203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.8"	""	"166.3"	""	"174.5"	""	"239.6"	""	"249.1"	"275.5"	""	"653"	"57"	"35.000"	"28.000"	"6.71248279588822E-05"	""	"0"	"4.119E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTAVLTEK"	"[K].gTTAVLTEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"689.42090"	"1377.83452"	"1377.83535"	"-0.60"	"-0.00042"	"13/76"	"13"	"76"	"1336715.17694092"	"HCD"	"MS2"	"33.98842"	"110.0"	"100.000"	"52.4200"	"16301"	"16301"	"16275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.0"	""	"136.2"	""	"141.6"	""	"182.6"	""	"215.9"	"212.2"	""	"653"	"45"	"35.000"	"28.000"	"0.00108613344150492"	""	"0"	"5.096E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTAVLTEK"	"[K].gTTAVLTEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"689.42114"	"1377.83501"	"1377.83535"	"-0.25"	"-0.00017"	"8/76"	"8"	"76"	"868104.817932129"	"HCD"	"MS2"	"0"	"76.8"	"100.000"	"52.4480"	"16346"	"16346"	"16326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.0"	""	"103.4"	""	"119.7"	""	"119.6"	""	"148.5"	"141.0"	""	"652"	"45"	"35.000"	"28.000"	"0.00101208642572984"	""	"0"	"0.0001827"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTTAVLTEK"	"[K].gTTAVLTEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.7018"	"0.0000"	"1"	"1"	"1"	"689.42114"	"1377.83501"	"1377.83535"	"-0.25"	"-0.00017"	"8/76"	"8"	"76"	"1197069.98242188"	"HCD"	"MS2"	"5.484447"	"98.1"	"100.000"	"52.7194"	"16423"	"16423"	"16401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.0"	""	"126.2"	""	"138.4"	""	"157.3"	""	"168.6"	"201.9"	""	"652"	"57"	"35.000"	"28.000"	"6.38583363562952E-05"	""	"0"	"1.303E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPSAEFSVDR"	"[R].aAPSAEFSVDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"689.86041"	"1378.71355"	"1378.71641"	"-2.08"	"-0.00143"	"8/92"	"8"	"92"	"651454.661376953"	"HCD"	"MS2"	"18.17417"	"48.5"	"100.000"	"52.1940"	"16209"	"16209"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.9"	""	"57.2"	""	"65.2"	""	"78.2"	"1.1"	"104.1"	"92.2"	""	"779"	"50"	"35.000"	"28.000"	"0.000390397890231341"	"22"	"9.9E-05"	"0.0009678"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPSAEFSVDR"	"[R].aAPSAEFSVDR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"689.86188"	"1378.71648"	"1378.71641"	"0.05"	"0.00003"	"9/92"	"9"	"92"	"698346.001403809"	"HCD"	"MS2"	"19.37922"	"48.8"	"100.000"	"51.8740"	"16112"	"16112"	"16091"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.7"	""	"58.3"	""	"68.0"	""	"86.2"	""	"92.3"	"99.7"	""	"799"	"51"	"36.000"	"29.000"	"0.000348752061671051"	"23"	"0"	"7.362E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQELESFR"	"[K].lQQELESFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"689.87958"	"1378.75188"	"1378.75280"	"-0.66"	"-0.00046"	"5/84"	"5"	"84"	"233808.063232422"	"HCD"	"MS2"	"27.30454"	"18.8"	"100.000"	"96.8398"	"34285"	"34285"	"34267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.8"	""	"22.4"	""	"27.2"	""	"34.0"	""	"34.4"	"36.4"	""	"905"	"25"	"36.000"	"29.000"	"0.154745697737453"	"23"	"0.0001991"	"0.005711"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQQELESFR"	"[K].lQQELESFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.5862"	"0.0000"	"1"	"1"	"1"	"689.87988"	"1378.75249"	"1378.75280"	"-0.22"	"-0.00015"	"6/84"	"6"	"84"	"340124.671691895"	"HCD"	"MS2"	"27.0065"	"24.8"	"100.000"	"96.9714"	"34369"	"34369"	"34350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.2"	""	"35.0"	""	"34.7"	""	"38.7"	""	"45.0"	"41.9"	""	"889"	"29"	"36.000"	"29.000"	"0.0598234927377869"	"26"	"9.9E-05"	"0.0008069"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAGELITQR"	"[R].fDAGELITQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"689.88000"	"1378.75273"	"1378.75280"	"-0.05"	"-0.00003"	"7/86"	"7"	"86"	"413074.192993164"	"HCD"	"MS2"	"14.34569"	"24.8"	"100.000"	"95.0929"	"33578"	"33578"	"33562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.7"	""	"34.9"	""	"33.1"	""	"40.2"	""	"44.0"	"51.8"	""	"905"	"42"	"36.000"	"29.000"	"0.00272658212698647"	"24"	"0"	"0.0003802"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAGELITQR"	"[R].fDAGELITQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"689.88025"	"1378.75322"	"1378.75280"	"0.31"	"0.00021"	"7/86"	"7"	"86"	"553546.910766602"	"HCD"	"MS2"	"6.357539"	"32.4"	"100.000"	"94.7856"	"33486"	"33486"	"33470"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.2"	""	"42.2"	""	"40.2"	""	"58.0"	"0.5"	"58.8"	"65.0"	""	"898"	"42"	"36.000"	"29.000"	"0.00300086418988308"	"23"	"0"	"0.0001084"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAGELITQR"	"[R].fDAGELITQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"689.88037"	"1378.75347"	"1378.75280"	"0.49"	"0.00034"	"7/86"	"7"	"86"	"518164.091674805"	"HCD"	"MS2"	"11.05419"	"28.7"	"100.000"	"94.8139"	"33464"	"33464"	"33443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.5"	""	"36.9"	""	"33.5"	""	"52.2"	""	"46.6"	"62.0"	""	"898"	"40"	"36.000"	"29.000"	"0.00455246212195769"	"27"	"0"	"0.0003396"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDAGELITQR"	"[R].fDAGELITQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"689.88049"	"1378.75371"	"1378.75280"	"0.66"	"0.00046"	"8/86"	"8"	"86"	"379553.228637695"	"HCD"	"MS2"	"6.291875"	"22.5"	"100.000"	"95.0901"	"33609"	"33609"	"33591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"26.6"	""	"28.8"	""	"36.8"	"0.2"	"41.9"	"49.4"	""	"896"	"41"	"36.000"	"29.000"	"0.00388398920339681"	"20"	"0"	"7.031E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDRR"	"[K].nTLFLDDRR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"460.25836"	"1378.76053"	"1378.76403"	"-2.54"	"-0.00117"	"7/90"	"7"	"90"	"2906574.98114014"	"HCD"	"MS2"	"15.56763"	"111.8"	"100.000"	"48.5956"	"14748"	"14748"	"14728"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.7"	""	"170.1"	""	"171.1"	""	"155.3"	"1.4"	"193.1"	"194.4"	""	"868"	"36"	"36.000"	"29.000"	"0.0115475467595268"	"24"	"0.001103"	"0.009186"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTLFLDDRR"	"[K].nTLFLDDRR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"1"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"460.25888"	"1378.76209"	"1378.76403"	"-1.41"	"-0.00065"	"7/90"	"7"	"90"	"2694984.89788818"	"HCD"	"MS2"	"52.05336"	"103.1"	"100.000"	"48.2639"	"14651"	"14651"	"14632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.1"	""	"146.3"	""	"164.6"	""	"147.5"	"2.2"	"156.0"	"183.6"	""	"938"	"35"	"36.000"	"29.000"	"0.0142946275013552"	"23"	"0.0001991"	"0.0048"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQLSGEGAK"	"[R].mQLSGEGAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"P97700"	"Mitochondrial 2-oxoglutarate/malate carrier protein OS=Rattus norvegicus OX=10116 GN=Slc25a11 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"3"	"689.88818"	"1378.76909"	"1378.77646"	"-5.34"	"-0.00368"	"7/82"	"7"	"82"	"752862.45513916"	"HCD"	"MS2"	"29.64532"	"64.0"	"100.000"	"48.1745"	"14615"	"14615"	"14593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"79.3"	""	"81.5"	""	"73.0"	""	"172.6"	"132.2"	""	"949"	"22"	"36.000"	"29.000"	"0.335920274690273"	"18"	"0.008135"	"0.1039"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"689.89166"	"1378.77605"	"1378.77795"	"-1.38"	"-0.00095"	"6/92"	"6"	"92"	"336306.302429199"	"HCD"	"MS2"	"58.49661"	"22.1"	"100.000"	"74.1076"	"25106"	"25106"	"25081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"40.9"	""	"32.0"	""	"31.0"	""	"33.2"	"35.9"	""	"871"	"10"	"36.000"	"29.000"	"4.65573399901467"	"19"	"0.006958"	"0.08791"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"689.89197"	"1378.77666"	"1378.77795"	"-0.93"	"-0.00064"	"7/92"	"7"	"92"	"573653.241699219"	"HCD"	"MS2"	"63.64762"	"46.9"	"100.000"	"73.3658"	"24804"	"24804"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.7"	""	"58.3"	""	"71.1"	""	"89.1"	""	"81.6"	"90.7"	""	"873"	"34"	"36.000"	"29.000"	"0.0167874312862797"	"24"	"0.000885"	"0.007785"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAK.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"689.89221"	"1378.77715"	"1378.77795"	"-0.58"	"-0.00040"	"6/92"	"6"	"92"	"148991.319396973"	"HCD"	"MS2"	"32.43219"	"8.1"	"100.000"	"102.4303"	"36549"	"36549"	"36531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.4"	""	"13.3"	""	"12.6"	""	"10.6"	""	"17.8"	"13.0"	""	"887"	"32"	"36.000"	"29.000"	"0.0293693019391731"	"18"	"0.0001686"	"0.001332"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7885"	"0.0000"	"1"	"1"	"1"	"689.89221"	"1378.77715"	"1378.77795"	"-0.58"	"-0.00040"	"7/92"	"7"	"92"	"984185.837402344"	"HCD"	"MS2"	"40.26638"	"54.6"	"100.000"	"72.5461"	"24499"	"24499"	"24478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.2"	""	"79.3"	""	"71.1"	""	"81.4"	""	"106.9"	"97.6"	""	"887"	"52"	"36.000"	"29.000"	"0.000295048644775472"	"27"	"0.0001991"	"0.00451"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAK.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.89240"	"1378.77751"	"1378.77795"	"-0.31"	"-0.00022"	"5/92"	"5"	"92"	"129354.31652832"	"HCD"	"MS2"	"27.37717"	"7.1"	"100.000"	"102.7465"	"36677"	"36677"	"36654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"7.8"	""	"11.6"	""	"10.1"	""	"13.1"	"14.7"	""	"869"	"16"	"36.000"	"29.000"	"1.05922880058122"	"14"	"0.002035"	"0.01782"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAK.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"689.89252"	"1378.77776"	"1378.77795"	"-0.14"	"-0.00009"	"7/92"	"7"	"92"	"220597.466796875"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"102.7331"	"36694"	"36694"	"36671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"13.3"	""	"11.0"	""	"16.2"	""	"15.6"	"13.7"	""	"880"	"36"	"36.000"	"29.000"	"0.0122026084604681"	"21"	"0"	"0.0002487"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"689.89258"	"1378.77788"	"1378.77795"	"-0.05"	"-0.00003"	"7/92"	"7"	"92"	"1346464.96862793"	"HCD"	"MS2"	"25.8081"	"66.2"	"100.000"	"72.4734"	"24440"	"24440"	"24416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.0"	""	"104.9"	""	"92.4"	""	"104.4"	""	"111.8"	"112.3"	""	"892"	"49"	"36.000"	"29.000"	"0.00052521226419028"	"26"	"0.0001991"	"0.00285"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].LVQEVTDFAk.[T]"	"K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"460.26425"	"1378.77820"	"1378.77795"	"0.18"	"0.00008"	"6/92"	"6"	"92"	"1660402.36505127"	"HCD"	"MS2"	"39.84679"	"66.5"	"100.000"	"72.6983"	"24561"	"24561"	"24536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.5"	""	"116.3"	""	"98.1"	""	"96.0"	""	"112.1"	"110.6"	""	"894"	"20"	"36.000"	"29.000"	"0.434818009028303"	"15"	"0.002084"	"0.0186"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLMDEVVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.4878"	"0.0000"	"1"	"1"	"1"	"689.90424"	"1378.80120"	"1378.80161"	"-0.30"	"-0.00021"	"7/64"	"7"	"64"	"5083313.51776123"	"HCD"	"MS2"	"2.827287"	"339.6"	"100.000"	"91.7941"	"32281"	"32281"	"32267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"596.9"	""	"560.5"	""	"517.1"	""	"320.3"	"3.0"	"574.8"	"639.5"	""	"854"	"41"	"36.000"	"29.000"	"0.00357625003468179"	""	"0.0001991"	"0.002278"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLMDEVVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"689.90460"	"1378.80193"	"1378.80161"	"0.23"	"0.00016"	"7/64"	"7"	"64"	"5040706.76757813"	"HCD"	"MS2"	"2.914728"	"333.9"	"100.000"	"91.8963"	"32287"	"32287"	"32271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"592.9"	""	"531.2"	""	"536.6"	""	"294.6"	""	"559.4"	"646.7"	""	"842"	"41"	"36.000"	"29.000"	"0.00368368169370751"	""	"0.0001991"	"0.002896"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLMDEVVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"689.90491"	"1378.80254"	"1378.80161"	"0.67"	"0.00046"	"14/64"	"14"	"64"	"1067179.36633301"	"HCD"	"MS2"	"41.87498"	"83.5"	"100.000"	"91.4916"	"32158"	"32158"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.6"	""	"119.6"	""	"168.0"	""	"84.2"	""	"131.9"	"142.5"	""	"833"	"45"	"36.000"	"29.000"	"0.00127530777013217"	""	"0"	"0.0002566"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLMDEVVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"689.90497"	"1378.80266"	"1378.80161"	"0.76"	"0.00053"	"14/64"	"14"	"64"	"1658572.09466553"	"HCD"	"MS2"	"36.00272"	"124.8"	"100.000"	"91.6057"	"32168"	"32168"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.2"	""	"204.9"	""	"230.8"	""	"124.2"	""	"190.5"	"221.5"	""	"833"	"44"	"36.000"	"29.000"	"0.00171638616704038"	""	"0"	"0.0003875"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGQEMNGK"	"[K].aSGQEMNGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"690.37103"	"1379.73479"	"1379.73532"	"-0.39"	"-0.00027"	"14/80"	"14"	"80"	"434944.570251465"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"27.8774"	"6406"	"6406"	"6386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.7"	""	"52.1"	""	"45.8"	""	"56.6"	""	"78.9"	"97.9"	""	"891"	"47"	"36.000"	"29.000"	"0.000943729885753208"	"22"	"0"	"0.0002768"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGQEMNGK"	"[K].aSGQEMNGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"690.37231"	"1379.73735"	"1379.73532"	"1.47"	"0.00102"	"14/80"	"14"	"80"	"406775.979675293"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"28.1239"	"6463"	"6463"	"6443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.3"	""	"51.7"	""	"44.8"	""	"51.2"	""	"76.3"	"81.0"	""	"886"	"47"	"36.000"	"29.000"	"0.000881868289171324"	"24"	"0"	"0.0003426"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITADPLDYR"	"[R].sITADPLDYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"690.37274"	"1379.73821"	"1379.73681"	"1.01"	"0.00070"	"6/86"	"6"	"86"	"342299.669799805"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"83.8522"	"29051"	"29051"	"29034"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.6"	""	"19.0"	""	"20.3"	""	"41.0"	""	"35.5"	"37.4"	""	"892"	"16"	"36.000"	"29.000"	"1.22556079228367"	"20"	"0.001718"	"0.01518"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITADPLDYR"	"[R].sITADPLDYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"690.37286"	"1379.73845"	"1379.73681"	"1.19"	"0.00082"	"5/86"	"5"	"86"	"288358.951782227"	"HCD"	"MS2"	"17.24515"	"18.3"	"100.000"	"83.8122"	"29064"	"29064"	"29048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"15.2"	""	"20.2"	""	"39.4"	""	"36.3"	"42.2"	""	"890"	"10"	"36.000"	"29.000"	"4.51190566652823"	"18"	"0.001951"	"0.01708"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITADPLDYR"	"[R].sITADPLDYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"690.37299"	"1379.73870"	"1379.73681"	"1.37"	"0.00094"	"7/86"	"7"	"86"	"339303.676635742"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"84.1799"	"29184"	"29184"	"29162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"18.2"	""	"19.7"	""	"40.8"	""	"34.9"	"40.8"	""	"890"	"21"	"36.000"	"29.000"	"0.374420838032112"	"16"	"0.004819"	"0.0586"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SITADPLDYR"	"[R].sITADPLDYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"P49793"	"Nuclear pore complex protein Nup98-Nup96 OS=Rattus norvegicus OX=10116 GN=Nup98 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"690.37323"	"1379.73918"	"1379.73681"	"1.72"	"0.00119"	"6/86"	"6"	"86"	"453331.933959961"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"84.1145"	"29186"	"29186"	"29171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"23.2"	""	"20.1"	""	"49.4"	""	"42.8"	"46.9"	""	"883"	"17"	"36.000"	"29.000"	"0.864829923352894"	"20"	"0.002084"	"0.01883"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSQQADLSR"	"[K].vFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"690.37604"	"1379.74480"	"1379.74804"	"-2.35"	"-0.00162"	"9/96"	"9"	"96"	"2494409.4262085"	"HCD"	"MS2"	"0"	"139.1"	"100.000"	"56.0004"	"17759"	"17759"	"17750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"193.6"	""	"185.2"	""	"182.2"	""	"214.1"	""	"283.7"	"270.5"	""	"873"	"30"	"36.000"	"29.000"	"0.0397177143503978"	"18"	"0"	"0.0001387"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSQQADLSR"	"[K].vFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"690.37622"	"1379.74516"	"1379.74804"	"-2.09"	"-0.00144"	"9/96"	"9"	"96"	"3164802.56622314"	"HCD"	"MS2"	"17.98813"	"163.0"	"100.000"	"55.6437"	"17649"	"17649"	"17637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.9"	""	"207.1"	""	"208.2"	""	"282.4"	""	"308.9"	"317.1"	""	"870"	"32"	"36.000"	"29.000"	"0.0250893411575629"	"25"	"0"	"0.0001004"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSQQADLSR"	"[K].vFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"690.37640"	"1379.74553"	"1379.74804"	"-1.82"	"-0.00126"	"8/96"	"8"	"96"	"5677799.11956787"	"HCD"	"MS2"	"12.17847"	"284.6"	"100.000"	"55.7347"	"17653"	"17653"	"17640"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"407.0"	""	"387.9"	""	"362.9"	""	"475.8"	""	"523.4"	"544.9"	""	"870"	"37"	"36.000"	"29.000"	"0.00840406217902362"	"22"	"0"	"0.0001318"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSPTTVNTGR"	"[K].aFSPTTVNTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"690.37738"	"1379.74748"	"1379.74804"	"-0.41"	"-0.00028"	"10/98"	"10"	"98"	"1219656.237854"	"HCD"	"MS2"	"37.44461"	"103.8"	"100.000"	"47.3126"	"14264"	"14264"	"14257"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.1"	""	"97.7"	""	"102.7"	""	"173.5"	""	"282.2"	"246.0"	""	"912"	"30"	"36.000"	"29.000"	"0.0419725004719446"	"17"	"0.0001991"	"0.003339"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSPTTVNTGR"	"[K].aFSPTTVNTGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"690.37756"	"1379.74785"	"1379.74804"	"-0.14"	"-0.00010"	"10/98"	"10"	"98"	"1134156.15167236"	"HCD"	"MS2"	"39.88688"	"95.5"	"100.000"	"47.6575"	"14366"	"14366"	"14345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.6"	""	"90.2"	""	"94.6"	""	"167.2"	""	"265.4"	"228.8"	""	"933"	"32"	"36.000"	"29.000"	"0.0310349927368112"	"19"	"0.0001686"	"0.001774"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPNSESK"	"[R].yPPNSESk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"690.38196"	"1379.75664"	"1379.75710"	"-0.33"	"-0.00023"	"7/68"	"7"	"68"	"319828.174194336"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"34.9975"	"9273"	"9273"	"9252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	""	"20.7"	""	"26.8"	""	"34.8"	""	"49.2"	"39.8"	""	"895"	"34"	"36.000"	"29.000"	"0.0172501565055433"	"18"	"0.002559"	"0.02588"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPNSESK"	"[R].yPPNSESk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.38208"	"1379.75688"	"1379.75710"	"-0.16"	"-0.00011"	"5/68"	"5"	"68"	"353680.18737793"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"34.7110"	"9121"	"9121"	"9092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"32.6"	""	"38.3"	""	"41.9"	"1.1"	"52.1"	"59.7"	""	"944"	"28"	"36.000"	"29.000"	"0.0825927637030838"	"14"	"0.002588"	"0.02624"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPNSESK"	"[R].yPPNSESk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"690.38239"	"1379.75749"	"1379.75710"	"0.28"	"0.00020"	"5/68"	"5"	"68"	"322330.243164063"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"35.2981"	"9356"	"9356"	"9338"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"26.3"	""	"23.4"	""	"34.0"	"2.0"	"40.8"	"49.4"	""	"942"	"30"	"36.000"	"29.000"	"0.0469916730060422"	"18"	"0.003357"	"0.03732"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPPNSESK"	"[R].yPPNSESk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"690.38330"	"1379.75932"	"1379.75710"	"1.61"	"0.00111"	"7/68"	"7"	"68"	"326077.111816406"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"34.6100"	"9116"	"9116"	"9091"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"25.6"	""	"23.7"	""	"32.2"	""	"51.5"	"55.5"	""	"931"	"31"	"36.000"	"29.000"	"0.0409184981584777"	"19"	"0.006033"	"0.0734"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFQALEK"	"[R].dAFQALEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"690.40021"	"1379.79314"	"1379.79349"	"-0.25"	"-0.00017"	"7/76"	"7"	"76"	"267050.297912598"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"86.0893"	"29954"	"29954"	"29937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"32.7"	""	"26.8"	""	"41.4"	"0.2"	"45.7"	"49.8"	""	"805"	"45"	"36.000"	"29.000"	"0.00125246582568517"	""	"0"	"0.0002303"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFQALEK"	"[R].dAFQALEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"690.40045"	"1379.79363"	"1379.79349"	"0.10"	"0.00007"	"7/76"	"7"	"76"	"396477.26550293"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"86.3791"	"30101"	"30101"	"30087"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"35.9"	""	"43.7"	""	"62.1"	""	"71.6"	"61.1"	""	"831"	"42"	"36.000"	"29.000"	"0.00250363508013896"	"28"	"0"	"0.0001548"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFQALEK"	"[R].dAFQALEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"690.40057"	"1379.79387"	"1379.79349"	"0.28"	"0.00019"	"7/76"	"7"	"76"	"387592.036804199"	"HCD"	"MS2"	"13.49363"	"35.6"	"100.000"	"86.3843"	"30071"	"30071"	"30056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"39.8"	""	"41.0"	""	"74.7"	"0.4"	"60.2"	"63.9"	""	"831"	"44"	"36.000"	"29.000"	"0.00161276477069115"	"29"	"0"	"9.231E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFQALEK"	"[R].dAFQALEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"Q5RJR2"	"Twinfilin-1 OS=Rattus norvegicus OX=10116 GN=Twf1 PE=1 SV=1"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"690.40063"	"1379.79399"	"1379.79349"	"0.37"	"0.00025"	"10/76"	"10"	"76"	"301879.207580566"	"HCD"	"MS2"	"14.65171"	"27.2"	"100.000"	"86.1003"	"29989"	"29989"	"29967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.4"	""	"37.5"	""	"32.7"	""	"47.9"	""	"57.0"	"45.1"	""	"831"	"19"	"36.000"	"29.000"	"0.480364636630817"	"28"	"0.0001991"	"0.005055"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDVMIAGK"	"[R].aTDVmIAGk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"690.40118"	"1379.79509"	"1379.79686"	"-1.28"	"-0.00088"	"6/66"	"6"	"66"	"876075.731750488"	"HCD"	"MS2"	"0"	"61.2"	"100.000"	"54.1806"	"17020"	"17020"	"16993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	""	"71.2"	""	"63.2"	""	"148.9"	"1.8"	"110.8"	"108.6"	""	"818"	"27"	"36.000"	"29.000"	"0.0831234017472915"	"18"	"0.001348"	"0.01135"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDVMIAGK"	"[R].aTDVmIAGk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.40125"	"1379.79521"	"1379.79686"	"-1.19"	"-0.00082"	"12/66"	"12"	"66"	"1041086.71380615"	"HCD"	"MS2"	"0"	"71.1"	"100.000"	"53.8586"	"16922"	"16922"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.8"	""	"82.3"	""	"75.5"	""	"181.4"	"3.4"	"130.2"	"118.2"	""	"818"	"30"	"36.000"	"29.000"	"0.044434808005938"	"14"	"0.0001991"	"0.005318"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDVMIAGK"	"[R].aTDVmIAGk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"690.40143"	"1379.79558"	"1379.79686"	"-0.93"	"-0.00064"	"7/66"	"7"	"66"	"759747.938476563"	"HCD"	"MS2"	"0"	"55.5"	"100.000"	"54.1852"	"17055"	"17055"	"17031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.5"	""	"59.3"	""	"68.2"	""	"123.7"	"0.3"	"101.8"	"100.7"	""	"820"	"27"	"36.000"	"29.000"	"0.0761699826587597"	"21"	"0.001162"	"0.009259"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATDVMIAGK"	"[R].aTDVmIAGk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.40222"	"1379.79717"	"1379.79686"	"0.22"	"0.00015"	"7/66"	"7"	"66"	"761488.497436523"	"HCD"	"MS2"	"0"	"58.8"	"100.000"	"54.5302"	"17162"	"17162"	"17142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.0"	""	"67.0"	""	"73.1"	""	"135.3"	"0.2"	"100.0"	"103.8"	""	"805"	"28"	"36.000"	"29.000"	"0.060223485157801"	"14"	"0.001217"	"0.009365"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLEVPQALGR"	"[R].aPLEVPQALGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"690.41327"	"1379.81926"	"1379.82082"	"-1.13"	"-0.00078"	"7/88"	"7"	"88"	"545008.368164063"	"HCD"	"MS2"	"7.722089"	"22.7"	"100.000"	"87.6204"	"30599"	"30599"	"30577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"34.7"	""	"28.9"	""	"28.0"	""	"49.0"	"47.4"	""	"710"	"26"	"35.000"	"28.000"	"0.0826472396471078"	"18"	"0.0001686"	"0.001956"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLEVPQALGR"	"[R].aPLEVPQALGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.41333"	"1379.81938"	"1379.82082"	"-1.04"	"-0.00072"	"8/88"	"8"	"88"	"432241.013061523"	"HCD"	"MS2"	"6.684018"	"18.1"	"100.000"	"87.7297"	"30608"	"30608"	"30588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"23.9"	""	"22.5"	""	"24.0"	""	"39.3"	"39.1"	""	"710"	"24"	"35.000"	"28.000"	"0.158572675213592"	"14"	"0.0001686"	"0.001318"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLEVPQALGR"	"[R].aPLEVPQALGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.41339"	"1379.81951"	"1379.82082"	"-0.95"	"-0.00065"	"9/88"	"9"	"88"	"562741.693115234"	"HCD"	"MS2"	"8.492291"	"23.1"	"100.000"	"87.4045"	"30477"	"30477"	"30460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"32.6"	""	"25.6"	""	"39.6"	""	"47.4"	"45.2"	""	"700"	"29"	"35.000"	"28.000"	"0.0394519109661429"	"14"	"9.9E-05"	"0.0007878"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APLEVPQALGR"	"[R].aPLEVPQALGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.41418"	"1379.82109"	"1379.82082"	"0.20"	"0.00014"	"9/88"	"9"	"88"	"641827.15020752"	"HCD"	"MS2"	"21.44456"	"26.0"	"100.000"	"87.3207"	"30478"	"30478"	"30457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.8"	""	"31.7"	""	"34.1"	""	"43.2"	"0.1"	"55.4"	"48.9"	""	"687"	"31"	"35.000"	"28.000"	"0.027411117507655"	"14"	"0.0001686"	"0.001139"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTNIGPDTMR"	"[R].fTNIGPDTMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"690.85992"	"1380.71257"	"1380.71430"	"-1.25"	"-0.00086"	"8/98"	"8"	"98"	"429203.078552246"	"HCD"	"MS2"	"14.99408"	"33.4"	"100.000"	"76.5899"	"26113"	"26113"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.2"	""	"42.5"	""	"40.7"	""	"60.9"	""	"71.8"	"60.3"	""	"726"	"25"	"35.000"	"28.000"	"0.104690343563496"	"15"	"0.0001991"	"0.002791"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTNIGPDTMR"	"[R].fTNIGPDTMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"P04937"	"Fibronectin OS=Rattus norvegicus OX=10116 GN=Fn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"690.86066"	"1380.71404"	"1380.71430"	"-0.19"	"-0.00013"	"7/98"	"7"	"98"	"389929.391967773"	"HCD"	"MS2"	"25.19701"	"32.7"	"100.000"	"76.6579"	"26172"	"26172"	"26153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"39.2"	""	"37.3"	""	"51.9"	"0.8"	"70.3"	"68.0"	""	"732"	"23"	"35.000"	"28.000"	"0.184706034908251"	"16"	"0.0001991"	"0.00597"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.3500"	"0.0000"	"1"	"1"	"1"	"690.87457"	"1380.74187"	"1380.74449"	"-1.90"	"-0.00131"	"7/68"	"7"	"68"	"315600.616394043"	"HCD"	"MS2"	"21.20687"	"28.4"	"100.000"	"62.6298"	"20481"	"20481"	"20452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"30.8"	""	"39.1"	""	"38.5"	""	"59.3"	"62.5"	""	"932"	"20"	"36.000"	"29.000"	"0.424019585046629"	"27"	"0.008792"	"0.1112"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"690.87457"	"1380.74187"	"1380.74449"	"-1.90"	"-0.00131"	"7/68"	"7"	"68"	"590342.38684082"	"HCD"	"MS2"	"26.70164"	"58.5"	"100.000"	"55.1506"	"17415"	"17415"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.1"	""	"65.3"	""	"75.0"	""	"92.4"	""	"103.5"	"128.0"	""	"932"	"15"	"36.000"	"29.000"	"1.51142261684797"	"21"	"0.009411"	"0.1232"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"690.87506"	"1380.74285"	"1380.74449"	"-1.19"	"-0.00082"	"7/68"	"7"	"68"	"341193.02166748"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"51.5769"	"15992"	"15992"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.5"	""	"34.6"	""	"31.6"	""	"48.6"	""	"65.5"	"64.4"	""	"922"	"21"	"36.000"	"29.000"	"0.361161065315224"	"25"	"0.007717"	"0.09806"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"690.87524"	"1380.74321"	"1380.74449"	"-0.92"	"-0.00064"	"9/68"	"9"	"68"	"409027.887451172"	"HCD"	"MS2"	"37.58124"	"37.1"	"100.000"	"50.6242"	"15609"	"15609"	"15583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.4"	""	"38.0"	""	"46.6"	""	"66.4"	"0.5"	"76.2"	"65.3"	""	"932"	"17"	"36.000"	"29.000"	"1.00319628838156"	"22"	"0.008135"	"0.1027"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"690.87524"	"1380.74321"	"1380.74449"	"-0.92"	"-0.00064"	"7/64"	"7"	"64"	"1296055.38842773"	"HCD"	"MS2"	"0"	"112.7"	"100.000"	"56.2716"	"17900"	"17900"	"17882"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.0"	""	"109.6"	""	"120.5"	""	"201.2"	""	"231.7"	"238.4"	""	"932"	"39"	"36.000"	"29.000"	"0.00546243040345428"	"24"	"0.0001686"	"0.00118"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"690.87537"	"1380.74346"	"1380.74449"	"-0.75"	"-0.00052"	"6/68"	"6"	"68"	"325684.479003906"	"HCD"	"MS2"	"40.46072"	"31.7"	"100.000"	"49.9995"	"15319"	"15319"	"15292"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.0"	""	"34.6"	""	"39.7"	""	"49.7"	"0.5"	"71.3"	"62.3"	""	"926"	"20"	"36.000"	"29.000"	"0.493834004129609"	"22"	"0.007069"	"0.08908"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"690.87561"	"1380.74394"	"1380.74449"	"-0.39"	"-0.00027"	"6/68"	"6"	"68"	"407372.144287109"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"58.9913"	"18971"	"18971"	"18949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.3"	""	"40.4"	""	"42.7"	""	"47.7"	"0.4"	"75.2"	"78.1"	""	"924"	"19"	"36.000"	"29.000"	"0.525583806050425"	"23"	"0.006237"	"0.07582"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"690.87561"	"1380.74394"	"1380.74449"	"-0.39"	"-0.00027"	"7/68"	"7"	"68"	"346610.424865723"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"51.8829"	"16082"	"16082"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"30.2"	""	"38.3"	""	"45.7"	"1.0"	"69.1"	"71.0"	""	"924"	"26"	"36.000"	"29.000"	"0.111594290551356"	"27"	"0.006033"	"0.07417"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"690.87567"	"1380.74407"	"1380.74449"	"-0.31"	"-0.00021"	"7/64"	"7"	"64"	"1277864.96520996"	"HCD"	"MS2"	"0"	"111.6"	"100.000"	"56.5434"	"17975"	"17975"	"17963"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.8"	""	"108.9"	""	"127.6"	""	"190.6"	""	"225.3"	"245.7"	""	"923"	"41"	"36.000"	"29.000"	"0.00372538966459839"	"23"	"9.9E-05"	"0.0006998"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"690.87573"	"1380.74419"	"1380.74449"	"-0.22"	"-0.00015"	"6/68"	"6"	"68"	"435275.734680176"	"HCD"	"MS2"	"17.95249"	"37.8"	"100.000"	"58.5076"	"18810"	"18810"	"18779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.4"	""	"42.8"	""	"50.1"	""	"49.4"	""	"83.2"	"83.0"	""	"923"	"25"	"36.000"	"29.000"	"0.132486523860439"	"22"	"0.004819"	"0.0574"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"690.87592"	"1380.74455"	"1380.74449"	"0.05"	"0.00003"	"7/68"	"7"	"68"	"3032561.16717529"	"HCD"	"MS2"	"0"	"188.0"	"100.000"	"43.0055"	"12514"	"12514"	"12491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"213.2"	""	"146.9"	""	"178.4"	""	"454.2"	"0.1"	"429.8"	"364.8"	""	"922"	"20"	"36.000"	"29.000"	"0.439239031614903"	"24"	"0.002286"	"0.02156"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDMAALEK"	"[R].eDmAALEk.[D]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"2"	"4"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q6AYZ1; P68370; Q6P9V9; Q5XIF6"	"Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"690.87598"	"1380.74468"	"1380.74449"	"0.14"	"0.00009"	"7/68"	"7"	"68"	"323543.120361328"	"HCD"	"MS2"	"19.07372"	"30.8"	"100.000"	"62.6751"	"20466"	"20466"	"20443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"42.5"	""	"39.8"	""	"37.3"	""	"60.9"	"67.3"	""	"922"	"22"	"36.000"	"29.000"	"0.297646599584976"	"28"	"0.006033"	"0.07413"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"690.87604"	"1380.74480"	"1380.74449"	"0.23"	"0.00016"	"6/64"	"6"	"64"	"587210.404785156"	"HCD"	"MS2"	"100"	"56.1"	"100.000"	"55.9828"	"17784"	"17784"	"17763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.4"	""	"62.6"	""	"73.4"	""	"83.8"	"0.1"	"114.2"	"118.8"	""	"921"	"14"	"36.000"	"29.000"	"1.7347209943209"	"18"	"0.001348"	"0.01053"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIDTAMK"	"[K].eDIDTAMk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"690.87640"	"1380.74553"	"1380.74449"	"0.76"	"0.00052"	"7/64"	"7"	"64"	"806279.350097656"	"HCD"	"MS2"	"0"	"69.2"	"100.000"	"56.2708"	"17866"	"17866"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.9"	""	"73.9"	""	"81.8"	""	"116.7"	""	"139.2"	"137.8"	""	"898"	"26"	"36.000"	"29.000"	"0.114880506322063"	"23"	"0.0001991"	"0.003344"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSQQADLSR"	"[K].vFSQqADLSR.[I]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.0333"	"0.0000"	"1"	"1"	"1"	"690.87714"	"1380.74700"	"1380.73206"	"10.82"	"0.00747"	"9/96"	"9"	"96"	"3849106.01184082"	"HCD"	"MS2"	"0"	"200.7"	"100.000"	"55.3482"	"17530"	"17530"	"17506"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.8"	""	"272.0"	""	"276.0"	""	"316.0"	""	"391.0"	"388.1"	""	"907"	"30"	"36.000"	"29.000"	"0.0444198708382845"	"24"	"0.001951"	"0.01733"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFSQQADLSR"	"[K].vFSqQADLSR.[I]"	"N-Term(TMT6plex); Q4(Deamidated)"	"1"	"2"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0333"	"2"	"2"	"2"	"690.87714"	"1380.74700"	"1380.73206"	"10.82"	"0.00747"	"9/96"	"9"	"96"	"3849106.01184082"	"HCD"	"MS2"	"0"	"200.7"	"100.000"	"55.3482"	"17530"	"17530"	"17506"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.8"	""	"272.0"	""	"276.0"	""	"316.0"	""	"391.0"	"388.1"	""	"907"	"29"	"36.000"	"29.000"	"0.0610347670564372"	"24"	"0.001615"	"0.01414"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSENPSK"	"[K].fNSENPSk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"460.92197"	"1380.75135"	"1380.75235"	"-0.73"	"-0.00033"	"8/76"	"8"	"76"	"7594427.68408203"	"HCD"	"MS2"	"67.73878"	"427.2"	"100.000"	"40.3112"	"11422"	"11422"	"11402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"648.5"	""	"581.6"	""	"531.5"	""	"664.6"	""	"798.3"	"827.5"	""	"890"	"20"	"36.000"	"29.000"	"0.445"	"24"	"0.007792"	"0.0996"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSENPSK"	"[K].fNSENPSk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"690.87946"	"1380.75163"	"1380.75235"	"-0.52"	"-0.00036"	"12/76"	"12"	"76"	"2409230.96417236"	"HCD"	"MS2"	"0"	"202.5"	"100.000"	"40.5836"	"11498"	"11498"	"11479"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"279.5"	""	"271.7"	""	"254.7"	""	"273.7"	"0.6"	"408.0"	"433.7"	""	"901"	"34"	"36.000"	"29.000"	"0.0182261439209698"	"22"	"0.0001991"	"0.004516"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSENPSK"	"[K].fNSENPSk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"690.88000"	"1380.75273"	"1380.75235"	"0.28"	"0.00019"	"12/76"	"12"	"76"	"3125518.54162598"	"HCD"	"MS2"	"0"	"255.3"	"100.000"	"40.2895"	"11379"	"11379"	"11357"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.2"	""	"368.5"	""	"327.8"	""	"363.0"	""	"507.1"	"480.3"	""	"899"	"21"	"36.000"	"29.000"	"0.399695902477148"	"20"	"0.001615"	"0.01442"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSENPSK"	"[K].fNSENPSk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"690.88019"	"1380.75310"	"1380.75235"	"0.54"	"0.00037"	"7/76"	"7"	"76"	"5312667.68347168"	"HCD"	"MS2"	"0"	"411.7"	"100.000"	"40.3846"	"11452"	"11452"	"11434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"618.6"	""	"546.8"	""	"495.8"	""	"560.8"	""	"805.9"	"882.9"	""	"903"	"42"	"36.000"	"29.000"	"0.00317437152427551"	"24"	"0.0001991"	"0.002236"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVK"	"[K].eTTEESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5526"	"0.0000"	"1"	"1"	"1"	"690.88489"	"1380.76250"	"1380.76225"	"0.18"	"0.00013"	"7/66"	"7"	"66"	"600933.049194336"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"32.1463"	"8080"	"8080"	"8063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.2"	""	"44.8"	""	"53.5"	""	"99.1"	""	"105.2"	"97.5"	""	"932"	"38"	"36.000"	"29.000"	"0.00752291087481142"	""	"9.9E-05"	"0.0007666"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETTEESVK"	"[K].eTTEESVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5128"	"0.0000"	"1"	"1"	"1"	"690.88538"	"1380.76348"	"1380.76225"	"0.89"	"0.00061"	"7/66"	"7"	"66"	"735131.532226563"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"32.0589"	"8082"	"8082"	"8064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.6"	""	"53.9"	""	"68.8"	""	"114.7"	""	"141.5"	"118.1"	""	"932"	"39"	"36.000"	"29.000"	"0.00573305247198569"	""	"0.0001686"	"0.001116"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTPTTTVYR"	"[K].vNTPTTTVYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"690.88751"	"1380.76775"	"1380.76845"	"-0.51"	"-0.00035"	"8/96"	"8"	"96"	"2066275.40032959"	"HCD"	"MS2"	"0"	"131.2"	"100.000"	"44.1961"	"12965"	"12965"	"12945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.2"	""	"197.6"	""	"231.6"	""	"155.0"	""	"221.6"	"230.7"	""	"942"	"31"	"36.000"	"29.000"	"0.0403664825103504"	"18"	"0.000885"	"0.007796"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTPTTTVYR"	"[K].vNTPTTTVYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"690.88763"	"1380.76799"	"1380.76845"	"-0.33"	"-0.00023"	"7/96"	"7"	"96"	"2000317.81652832"	"HCD"	"MS2"	"12.87603"	"116.2"	"100.000"	"43.8970"	"12843"	"12843"	"12825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.5"	""	"163.6"	""	"169.4"	""	"162.5"	""	"214.8"	"218.0"	""	"942"	"40"	"36.000"	"29.000"	"0.00446705096214723"	"17"	"0.0001991"	"0.003244"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTPTTTVYR"	"[K].vNTPTTTVYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.88776"	"1380.76824"	"1380.76845"	"-0.15"	"-0.00010"	"7/96"	"7"	"96"	"1129797.02642822"	"HCD"	"MS2"	"0"	"85.1"	"100.000"	"44.0611"	"12946"	"12946"	"12922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.6"	""	"133.0"	""	"156.3"	""	"105.0"	"1.7"	"144.8"	"141.6"	""	"956"	"32"	"36.000"	"29.000"	"0.0286700134450134"	"15"	"0.002559"	"0.0254"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTPTTTVYR"	"[K].vNTPTTTVYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.88782"	"1380.76836"	"1380.76845"	"-0.06"	"-0.00004"	"7/96"	"7"	"96"	"3441036.78222656"	"HCD"	"MS2"	"0"	"164.4"	"100.000"	"43.7504"	"12819"	"12819"	"12794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.6"	""	"230.8"	""	"238.9"	""	"227.9"	"0.4"	"298.3"	"295.5"	""	"957"	"43"	"36.000"	"29.000"	"0.00241480430884149"	"15"	"0.0001991"	"0.003611"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEmk.[F]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"690.89288"	"1380.77849"	"1380.78087"	"-1.73"	"-0.00119"	"5/60"	"5"	"60"	"2103253.35375977"	"HCD"	"MS2"	"20.19015"	"148.5"	"100.000"	"57.0728"	"18189"	"18189"	"18170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.6"	""	"129.3"	""	"155.9"	""	"408.5"	""	"269.5"	"302.5"	""	"881"	"22"	"36.000"	"29.000"	"0.302653647826269"	"25"	"0.00329"	"0.03579"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEmk.[F]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"690.89313"	"1380.77898"	"1380.78087"	"-1.37"	"-0.00095"	"5/60"	"5"	"60"	"2087871.65063477"	"HCD"	"MS2"	"11.91197"	"89.4"	"100.000"	"56.8013"	"18113"	"18113"	"18101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.0"	""	"87.4"	""	"103.0"	""	"227.1"	""	"157.8"	"182.2"	""	"882"	"21"	"36.000"	"29.000"	"0.391235801308741"	"24"	"0.0042"	"0.04512"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEmk.[F]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"690.89325"	"1380.77922"	"1380.78087"	"-1.20"	"-0.00083"	"9/60"	"9"	"60"	"1964269.4597168"	"HCD"	"MS2"	"45.24418"	"151.1"	"100.000"	"56.5010"	"17993"	"17993"	"17978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.2"	""	"139.4"	""	"145.0"	""	"359.7"	""	"284.1"	"341.1"	""	"881"	"20"	"36.000"	"29.000"	"0.490846742047157"	"24"	"0.004213"	"0.04776"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEmk.[F]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"690.89355"	"1380.77983"	"1380.78087"	"-0.75"	"-0.00052"	"6/60"	"6"	"60"	"877265.94909668"	"HCD"	"MS2"	"25.49767"	"74.5"	"100.000"	"57.3990"	"18321"	"18321"	"18300"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.1"	""	"75.4"	""	"90.8"	""	"155.4"	"2.1"	"139.6"	"157.3"	""	"884"	"20"	"36.000"	"29.000"	"0.426012428441795"	"23"	"0.007069"	"0.09026"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEmk.[F]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"690.89362"	"1380.77995"	"1380.78087"	"-0.67"	"-0.00046"	"6/60"	"6"	"60"	"1888520.90820313"	"HCD"	"MS2"	"44.54556"	"145.1"	"100.000"	"56.7565"	"18060"	"18060"	"18043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.0"	""	"129.7"	""	"149.9"	""	"328.3"	""	"299.5"	"305.4"	""	"880"	"13"	"36.000"	"29.000"	"2.2256285128137"	"23"	"0.005266"	"0.06719"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGTDEMK"	"[K].iLGTDEmk.[F]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"690.89410"	"1380.78093"	"1380.78087"	"0.04"	"0.00003"	"9/60"	"9"	"60"	"908757.456665039"	"HCD"	"MS2"	"22.86833"	"77.0"	"100.000"	"57.1134"	"18240"	"18240"	"18216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.1"	""	"75.7"	""	"93.9"	""	"179.0"	""	"139.8"	"160.0"	""	"875"	"20"	"36.000"	"29.000"	"0.481923447924369"	"24"	"0.006465"	"0.08028"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENNVMNIR"	"[K].yENNVMNIR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.35834"	"1381.70940"	"1381.70955"	"-0.11"	"-0.00008"	"7/76"	"7"	"76"	"668916.901916504"	"HCD"	"MS2"	"32.20733"	"51.5"	"100.000"	"58.8876"	"18964"	"18964"	"18942"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.7"	""	"72.1"	""	"75.3"	""	"63.2"	""	"100.2"	"96.5"	""	"697"	"25"	"35.000"	"28.000"	"0.116466971449101"	"14"	"9.9E-05"	"0.0009339"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENNVMNIR"	"[K].yENNVMNIR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.35846"	"1381.70964"	"1381.70955"	"0.07"	"0.00005"	"8/76"	"8"	"76"	"932193.237304688"	"HCD"	"MS2"	"10.17373"	"73.0"	"100.000"	"59.2005"	"19091"	"19091"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.7"	""	"99.9"	""	"111.0"	""	"84.7"	"1.8"	"128.6"	"141.0"	""	"683"	"30"	"35.000"	"28.000"	"0.0351067565810191"	"14"	"9.9E-05"	"0.0005132"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENNVMNIR"	"[K].yENNVMNIR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.35919"	"1381.71111"	"1381.70955"	"1.13"	"0.00078"	"7/76"	"7"	"76"	"953365.942138672"	"HCD"	"MS2"	"19.34085"	"69.7"	"100.000"	"59.1778"	"19047"	"19047"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.2"	""	"100.1"	""	"100.0"	""	"81.7"	""	"131.3"	"132.0"	""	"675"	"28"	"35.000"	"28.000"	"0.0582470288546693"	"14"	"9.9E-05"	"0.0005951"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLQFEDK"	"[K].gSLQFEDk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"691.39240"	"1381.77751"	"1381.77275"	"3.45"	"0.00238"	"7/74"	"7"	"74"	"585571.828796387"	"HCD"	"MS2"	"32.19489"	"59.0"	"100.000"	"62.3258"	"20357"	"20357"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.6"	""	"69.6"	""	"70.7"	""	"84.8"	"0.6"	"140.0"	"124.4"	""	"738"	"33"	"35.000"	"28.000"	"0.017499529256103"	"27"	"0.0001686"	"0.001471"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"691.42078"	"1381.83428"	"1381.83647"	"-1.58"	"-0.00109"	"9/100"	"9"	"100"	"594084.682739258"	"HCD"	"MS2"	"0"	"28.8"	"100.000"	"95.3324"	"33675"	"33675"	"33649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.7"	""	"43.5"	""	"41.7"	""	"48.9"	""	"53.9"	"45.3"	""	"461"	"62"	"33.000"	"26.000"	"1.31422864760712E-05"	"22"	"0"	"2.2E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"691.42157"	"1381.83586"	"1381.83647"	"-0.44"	"-0.00030"	"9/100"	"9"	"100"	"793729.704650879"	"HCD"	"MS2"	"18.69872"	"37.7"	"100.000"	"95.6347"	"33797"	"33797"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"58.4"	""	"46.9"	""	"61.9"	""	"64.2"	"72.3"	""	"447"	"41"	"33.000"	"26.000"	"0.00163409585158544"	"18"	"0"	"1.238E-06"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"691.42163"	"1381.83599"	"1381.83647"	"-0.35"	"-0.00024"	"10/100"	"10"	"100"	"858787.257324219"	"HCD"	"MS2"	"8.544214"	"39.1"	"100.000"	"95.6209"	"33824"	"33824"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"58.4"	""	"52.7"	""	"69.7"	"1.7"	"61.7"	"68.9"	""	"447"	"56"	"33.000"	"26.000"	"5.79799087433555E-05"	"19"	"0"	"9.657E-07"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"691.42212"	"1381.83696"	"1381.83647"	"0.36"	"0.00025"	"8/100"	"8"	"100"	"526321.058044434"	"HCD"	"MS2"	"7.215978"	"24.8"	"100.000"	"95.3252"	"33705"	"33705"	"33680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"37.6"	""	"34.1"	""	"43.5"	""	"42.6"	"39.7"	""	"419"	"49"	"33.000"	"26.000"	"0.000287199730011537"	"20"	"0"	"2.126E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFNPEHTR"	"[K].rPFNPEHTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"691.87720"	"1382.74712"	"1382.74905"	"-1.40"	"-0.00096"	"6/84"	"6"	"84"	"1736484.53839111"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"20.4418"	"3450"	"3450"	"3439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.9"	""	"60.2"	""	"59.3"	""	"69.7"	"0.1"	"72.5"	"71.2"	""	"764"	"32"	"35.000"	"28.000"	"0.0221852007493141"	"23"	"0.0001991"	"0.002616"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFNPEHTR"	"[K].rPFNPEHTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.58743"	"1382.74775"	"1382.74905"	"-0.94"	"-0.00043"	"8/84"	"8"	"84"	"73987817.7172852"	"HCD"	"MS2"	"30.31822"	"450.4"	"18.226"	"20.4869"	"3506"	"3506"	"3495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"599.5"	""	"603.5"	""	"600.5"	""	"755.0"	""	"830.3"	"883.5"	""	"786"	"27"	"35.000"	"28.000"	"0.079504653722056"	"14"	"0.001261"	"0.01007"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFNPEHTR"	"[K].rPFNPEHTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.58759"	"1382.74820"	"1382.74905"	"-0.61"	"-0.00028"	"8/84"	"8"	"84"	"61453545.6478271"	"HCD"	"MS2"	"39.47533"	"621.0"	"28.869"	"20.4877"	"3468"	"3468"	"3454"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"832.2"	""	"846.4"	""	"815.9"	""	"1045.9"	""	"1169.7"	"1187.2"	""	"779"	"24"	"35.000"	"28.000"	"0.140769141498129"	"14"	"0.001316"	"0.01031"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPFNPEHTR"	"[K].rPFNPEHTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"691.87817"	"1382.74907"	"1382.74905"	"0.02"	"0.00001"	"12/84"	"12"	"84"	"1373472.08898926"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"20.4111"	"3476"	"3476"	"3467"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.5"	""	"48.8"	""	"46.9"	""	"59.9"	"2.2"	"61.4"	"64.3"	""	"770"	"28"	"35.000"	"28.000"	"0.0569456729444759"	"22"	"0.008792"	"0.1117"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPSETAK"	"[R].yEPSETAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"691.88190"	"1382.75652"	"1382.75677"	"-0.18"	"-0.00012"	"7/64"	"7"	"64"	"1808043.41833496"	"HCD"	"MS2"	"0"	"148.2"	"100.000"	"38.8406"	"10794"	"10794"	"10765"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"212.9"	""	"226.3"	""	"202.7"	""	"219.3"	""	"259.7"	"286.7"	""	"777"	"39"	"35.000"	"28.000"	"0.00472488261251114"	"26"	"0.0001686"	"0.001263"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPSETAK"	"[R].yEPSETAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"691.88232"	"1382.75737"	"1382.75677"	"0.44"	"0.00030"	"7/64"	"7"	"64"	"1635068.22833252"	"HCD"	"MS2"	"0"	"129.9"	"100.000"	"38.7532"	"10794"	"10794"	"10770"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.4"	""	"185.5"	""	"177.0"	""	"186.9"	"1.8"	"239.5"	"253.0"	""	"783"	"40"	"35.000"	"28.000"	"0.00402468380716514"	"26"	"0.0001686"	"0.001283"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"461.59076"	"1382.75772"	"1382.75894"	"-0.88"	"-0.00041"	"4/98"	"4"	"98"	"2978018.78466797"	"HCD"	"MS2"	"37.82153"	"101.3"	"100.000"	"44.9136"	"13257"	"13257"	"13240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.6"	""	"170.8"	""	"131.6"	""	"139.5"	""	"190.4"	"195.8"	""	"742"	"18"	"35.000"	"28.000"	"0.579927775419794"	"19"	"0.0001991"	"0.003786"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"461.59103"	"1382.75855"	"1382.75894"	"-0.29"	"-0.00013"	"12/98"	"12"	"98"	"10071483.682312"	"HCD"	"MS2"	"9.46037"	"99.8"	"91.797"	"44.4602"	"13107"	"13107"	"13100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.9"	""	"139.5"	""	"123.7"	""	"150.5"	""	"171.1"	"193.8"	""	"753"	"34"	"35.000"	"28.000"	"0.0137014011101893"	"25"	"0"	"6.833E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDQVIGSHR"	"[K].eIDQVIGSHR.[L]"	"N-Term(TMT6plex)"	"2"	"3"	"Q64583; P00176"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2;Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"Q64583; P00176; P33272"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"461.59113"	"1382.75882"	"1382.75894"	"-0.09"	"-0.00004"	"13/98"	"13"	"98"	"10396091.8411255"	"HCD"	"MS2"	"12.38318"	"119.4"	"100.000"	"44.6065"	"13132"	"13132"	"13121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.9"	""	"170.6"	""	"147.7"	""	"175.8"	""	"182.0"	"258.6"	""	"760"	"36"	"35.000"	"28.000"	"0.00903199308917453"	"23"	"0"	"7.314E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"691.88708"	"1382.76689"	"1382.76800"	"-0.80"	"-0.00055"	"12/64"	"12"	"64"	"4114376.05633545"	"HCD"	"MS2"	"0"	"339.8"	"100.000"	"36.9968"	"10080"	"10080"	"10058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"530.3"	""	"407.9"	""	"449.0"	""	"575.4"	"0.4"	"637.1"	"618.8"	""	"728"	"31"	"35.000"	"28.000"	"0.0322924788381818"	"23"	"0.0001991"	"0.003976"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"691.88721"	"1382.76714"	"1382.76800"	"-0.62"	"-0.00043"	"12/64"	"12"	"64"	"3914457.25952148"	"HCD"	"MS2"	"0"	"349.5"	"100.000"	"37.0812"	"10077"	"10077"	"10052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"553.2"	""	"404.2"	""	"429.1"	""	"591.9"	""	"681.6"	"656.9"	""	"726"	"34"	"35.000"	"28.000"	"0.0146186283460142"	"21"	"0.0001991"	"0.004541"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"691.88745"	"1382.76763"	"1382.76800"	"-0.27"	"-0.00019"	"7/64"	"7"	"64"	"493391.941833496"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"37.3525"	"10225"	"10225"	"10200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.8"	""	"54.4"	""	"53.8"	""	"76.7"	"0.7"	"104.7"	"104.6"	""	"727"	"29"	"35.000"	"28.000"	"0.0412576431496886"	"21"	"9.9E-05"	"0.0008245"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASENVNK"	"[R].yASENVNk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"2"	"2"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"Q6NYB7; P10536"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"691.88770"	"1382.76811"	"1382.76800"	"0.08"	"0.00006"	"7/64"	"7"	"64"	"643164.056640625"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"37.4142"	"10213"	"10213"	"10187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.6"	""	"77.7"	""	"65.4"	""	"100.3"	"0.3"	"133.6"	"114.6"	""	"765"	"32"	"35.000"	"28.000"	"0.0236391273052944"	"21"	"9.9E-05"	"0.0006529"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDVGHVPIR"	"[K].nFDVGHVPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"461.59549"	"1382.77192"	"1382.77420"	"-1.65"	"-0.00076"	"12/90"	"12"	"90"	"2461693.42736816"	"HCD"	"MS2"	"9.599164"	"44.0"	"100.000"	"61.2496"	"19922"	"19922"	"19900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.8"	""	"57.9"	""	"65.3"	""	"62.5"	"2.0"	"87.9"	"81.8"	""	"747"	"33"	"35.000"	"28.000"	"0.0184625041589583"	"19"	"0"	"0.000151"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFDVGHVPIR"	"[K].nFDVGHVPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"P38062"	"Methionine aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Metap2 PE=1 SV=2"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"461.59601"	"1382.77347"	"1382.77420"	"-0.53"	"-0.00024"	"10/90"	"10"	"90"	"2699143.50537109"	"HCD"	"MS2"	"4.606952"	"45.5"	"100.000"	"61.3301"	"19924"	"19924"	"19896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.3"	""	"61.5"	""	"67.3"	""	"70.8"	"1.0"	"88.1"	"83.1"	""	"740"	"41"	"35.000"	"28.000"	"0.00318567688308302"	"21"	"0"	"6.851E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDYETLK"	"[R].gVDYETLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"691.89996"	"1382.79265"	"1382.79315"	"-0.36"	"-0.00025"	"7/62"	"7"	"62"	"744441.806213379"	"HCD"	"MS2"	"13.45908"	"65.6"	"100.000"	"69.8935"	"23395"	"23395"	"23374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.7"	""	"81.8"	""	"81.0"	""	"95.6"	"1.6"	"148.7"	"119.7"	""	"677"	"28"	"35.000"	"28.000"	"0.0493808627103206"	"18"	"0.0001686"	"0.001535"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISYEEGK"	"[R].vISYEEGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"691.90002"	"1382.79277"	"1382.79315"	"-0.28"	"-0.00019"	"7/62"	"7"	"62"	"1561332.69219971"	"HCD"	"MS2"	"25.83612"	"129.4"	"100.000"	"59.2833"	"19125"	"19125"	"19104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.9"	""	"194.8"	""	"196.1"	""	"182.5"	""	"221.4"	"194.8"	""	"676"	"38"	"35.000"	"28.000"	"0.00535693899051856"	"19"	"0.0001686"	"0.001196"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISYEEGK"	"[R].vISYEEGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"Q62639"	"GTP-binding protein Rheb OS=Rattus norvegicus OX=10116 GN=Rheb PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"691.90009"	"1382.79289"	"1382.79315"	"-0.19"	"-0.00013"	"7/62"	"7"	"62"	"1586246.01629639"	"HCD"	"MS2"	"32.56937"	"130.8"	"100.000"	"59.4587"	"19161"	"19161"	"19144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.0"	""	"187.9"	""	"201.8"	""	"178.3"	""	"236.2"	"213.4"	""	"702"	"38"	"35.000"	"28.000"	"0.00560153580680093"	"19"	"9.9E-05"	"0.0009503"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSFEEAK"	"[K].iTSFEEAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"691.90021"	"1382.79314"	"1382.79315"	"-0.01"	"-0.00001"	"7/64"	"7"	"64"	"900818.492004395"	"HCD"	"MS2"	"19.3579"	"73.9"	"100.000"	"75.4710"	"25689"	"25689"	"25665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.5"	""	"110.8"	""	"87.7"	""	"117.5"	"0.2"	"142.7"	"138.8"	""	"701"	"30"	"35.000"	"28.000"	"0.0330893337138216"	"16"	"0.0001686"	"0.001602"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSFEEAK"	"[K].iTSFEEAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"691.90021"	"1382.79314"	"1382.79315"	"-0.01"	"-0.00001"	"7/64"	"7"	"64"	"1059011.36456299"	"HCD"	"MS2"	"17.1902"	"88.0"	"100.000"	"75.3757"	"25619"	"25619"	"25601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.1"	""	"110.2"	""	"121.9"	""	"148.5"	""	"186.1"	"159.1"	""	"701"	"30"	"35.000"	"28.000"	"0.03505"	"17"	"0.0001686"	"0.001472"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDYETLK"	"[R].gVDYETLk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"Q8VHE9"	"All-trans-retinol 13,14-reductase OS=Rattus norvegicus OX=10116 GN=Retsat PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"691.90027"	"1382.79326"	"1382.79315"	"0.08"	"0.00005"	"12/62"	"12"	"62"	"682815.504089355"	"HCD"	"MS2"	"8.436916"	"61.9"	"100.000"	"69.9644"	"23458"	"23458"	"23435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.2"	""	"78.3"	""	"71.3"	""	"81.2"	""	"145.3"	"110.2"	""	"701"	"34"	"35.000"	"28.000"	"0.0144107977247135"	"21"	"9.9E-05"	"0.0008065"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSFEEAK"	"[K].iTSFEEAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"691.90033"	"1382.79338"	"1382.79315"	"0.17"	"0.00011"	"7/64"	"7"	"64"	"1283731.7288208"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"75.7703"	"25811"	"25811"	"25793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.4"	""	"134.2"	""	"137.0"	""	"178.9"	""	"196.6"	"221.4"	""	"701"	"31"	"35.000"	"28.000"	"0.0308097392149225"	"22"	"0.0001686"	"0.00163"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSFEEAK"	"[K].iTSFEEAk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"691.90070"	"1382.79411"	"1382.79315"	"0.70"	"0.00048"	"7/64"	"7"	"64"	"914493.822021484"	"HCD"	"MS2"	"0"	"78.2"	"100.000"	"75.7208"	"25760"	"25760"	"25743"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.5"	""	"96.5"	""	"103.3"	""	"124.0"	""	"150.6"	"167.9"	""	"670"	"32"	"35.000"	"28.000"	"0.0211857970211033"	"18"	"9.9E-05"	"0.0007154"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHPETLEK"	"[K].aHPETLEk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.90485"	"1382.80242"	"1382.80439"	"-1.42"	"-0.00099"	"4/62"	"4"	"62"	"143417.933288574"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"31.2157"	"7704"	"7704"	"7681"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"5.6"	""	"10.0"	""	"8.9"	"1.2"	"12.2"	"39.2"	""	"617"	"12"	"34.000"	"27.000"	"1.87609647894484"	"13"	"0.004672"	"0.05524"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"691.91345"	"1382.81963"	"1382.82048"	"-0.62"	"-0.00043"	"9/100"	"9"	"100"	"889464.498474121"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"103.8975"	"37156"	"37156"	"37134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.9"	""	"44.1"	""	"49.4"	""	"62.1"	""	"66.2"	"62.9"	""	"521"	"39"	"34.000"	"27.000"	"0.0032870607276087"	"21"	"0"	"2.92E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.91370"	"1382.82012"	"1382.82048"	"-0.26"	"-0.00018"	"16/100"	"16"	"100"	"862003.710266113"	"HCD"	"MS2"	"1.867912"	"35.3"	"100.000"	"103.6644"	"37045"	"37045"	"37026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"40.3"	""	"53.7"	""	"61.8"	"3.0"	"71.3"	"57.5"	""	"521"	"28"	"34.000"	"27.000"	"0.0373084947760758"	"15"	"0"	"9.891E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"691.91370"	"1382.82012"	"1382.82048"	"-0.26"	"-0.00018"	"10/100"	"10"	"100"	"1483372.27288818"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"103.3408"	"36915"	"36915"	"36898"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.4"	""	"72.2"	""	"82.4"	""	"105.7"	""	"113.5"	"101.1"	""	"521"	"51"	"34.000"	"27.000"	"0.000193111317858889"	"21"	"0"	"1.932E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.91382"	"1382.82036"	"1382.82048"	"-0.09"	"-0.00006"	"8/100"	"8"	"100"	"307422.230285645"	"HCD"	"MS2"	"19.39548"	"20.7"	"100.000"	"101.0755"	"36028"	"36028"	"36009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"26.8"	""	"31.1"	""	"37.8"	""	"35.8"	"43.5"	""	"524"	"39"	"34.000"	"27.000"	"0.00303599667312643"	"15"	"0"	"0.0001742"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"691.91394"	"1382.82060"	"1382.82048"	"0.09"	"0.00006"	"10/100"	"10"	"100"	"779596.090881348"	"HCD"	"MS2"	"26.71725"	"41.5"	"100.000"	"100.6701"	"35837"	"35837"	"35819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.2"	""	"46.7"	""	"51.3"	""	"83.4"	""	"80.1"	"71.2"	""	"535"	"53"	"34.000"	"27.000"	"0.000141359104849861"	"20"	"0"	"6.257E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.91400"	"1382.82073"	"1382.82048"	"0.18"	"0.00012"	"7/100"	"7"	"100"	"270710.659301758"	"HCD"	"MS2"	"29.23481"	"18.6"	"100.000"	"100.9841"	"35964"	"35964"	"35946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"22.4"	""	"31.3"	""	"28.7"	""	"38.0"	"32.2"	""	"535"	"26"	"34.000"	"27.000"	"0.0635804776672155"	"14"	"0.0001991"	"0.003171"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"691.91400"	"1382.82073"	"1382.82048"	"0.18"	"0.00012"	"10/100"	"10"	"100"	"1530191.49316406"	"HCD"	"MS2"	"2.390826"	"57.1"	"100.000"	"103.5773"	"37026"	"37026"	"37015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.0"	""	"75.7"	""	"73.7"	""	"107.9"	""	"111.2"	"96.0"	""	"535"	"51"	"34.000"	"27.000"	"0.000204797092348761"	"24"	"0"	"1.822E-06"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGVAPIIDVVR"	"[K].nGVAPIIDVVR.[S]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"P18445"	"60S ribosomal protein L27a OS=Rattus norvegicus OX=10116 GN=Rpl27a PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"691.91425"	"1382.82121"	"1382.82048"	"0.53"	"0.00037"	"8/100"	"8"	"100"	"720864.036560059"	"HCD"	"MS2"	"26.47754"	"39.3"	"100.000"	"100.7868"	"35912"	"35912"	"35893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.1"	""	"42.9"	""	"50.3"	""	"80.1"	"0.1"	"77.8"	"73.8"	""	"495"	"42"	"33.000"	"26.000"	"0.00150860382066942"	"19"	"0"	"3.628E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGmQLQGYR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"692.34747"	"1383.68767"	"1383.68882"	"-0.83"	"-0.00057"	"8/82"	"8"	"82"	"530346.613342285"	"HCD"	"MS2"	"36.00525"	"31.3"	"100.000"	"37.8475"	"10424"	"10424"	"10394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.4"	""	"31.1"	""	"98.4"	""	"33.6"	""	"47.4"	"44.1"	""	"616"	"28"	"34.000"	"27.000"	"0.0543939648771338"	"20"	"0.003904"	"0.04223"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGMQLQGYR"	"[R].dAGmQLQGYR.[Y]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.34802"	"1383.68877"	"1383.68882"	"-0.03"	"-0.00002"	"7/82"	"7"	"82"	"388510.104858398"	"HCD"	"MS2"	"100"	"24.9"	"100.000"	"37.8983"	"10409"	"10409"	"10380"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.6"	""	"20.6"	""	"72.0"	""	"30.3"	""	"36.8"	"36.4"	""	"623"	"15"	"34.000"	"27.000"	"0.958204157791732"	"13"	"0.004213"	"0.04673"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"692.35059"	"1383.69390"	"1383.69534"	"-1.04"	"-0.00072"	"8/84"	"8"	"84"	"1140869.70556641"	"HCD"	"MS2"	"22.94626"	"60.2"	"100.000"	"64.1122"	"21050"	"21050"	"21043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.0"	""	"70.4"	""	"79.2"	""	"86.3"	""	"117.4"	"127.8"	""	"663"	"56"	"35.000"	"28.000"	"7.80698837611527E-05"	"27"	"0"	"8.971E-06"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"692.35077"	"1383.69426"	"1383.69534"	"-0.78"	"-0.00054"	"7/84"	"7"	"84"	"2140507.33233643"	"HCD"	"MS2"	"17.62585"	"107.7"	"100.000"	"64.4081"	"21169"	"21169"	"21152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.4"	""	"113.2"	""	"125.1"	""	"168.9"	""	"212.3"	"266.0"	""	"674"	"41"	"35.000"	"28.000"	"0.00244697707655647"	"23"	"0"	"2.084E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"692.35101"	"1383.69475"	"1383.69534"	"-0.43"	"-0.00030"	"8/84"	"8"	"84"	"1465666.23535156"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"64.1176"	"21084"	"21084"	"21072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.2"	""	"89.5"	""	"95.8"	""	"113.3"	"1.6"	"153.4"	"172.4"	""	"675"	"57"	"35.000"	"28.000"	"6.95462595728624E-05"	"28"	"0"	"1.035E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSEEIESAFR"	"[K].sSEEIESAFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"692.35132"	"1383.69536"	"1383.69534"	"0.01"	"0.00001"	"7/84"	"7"	"84"	"1850165.35473633"	"HCD"	"MS2"	"21.15477"	"87.6"	"100.000"	"64.4320"	"21212"	"21212"	"21195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.0"	""	"104.6"	""	"98.0"	""	"138.4"	""	"164.4"	"211.2"	""	"688"	"29"	"35.000"	"28.000"	"0.0407904449369503"	"21"	"0"	"6.042E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"692.36084"	"1383.71440"	"1383.71563"	"-0.89"	"-0.00061"	"5/76"	"5"	"76"	"635108.593505859"	"HCD"	"MS2"	"10.15535"	"62.3"	"100.000"	"42.4719"	"12262"	"12262"	"12240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.8"	""	"62.4"	""	"68.6"	""	"85.4"	"1.0"	"106.8"	"120.1"	""	"671"	"11"	"35.000"	"28.000"	"2.77135732083143"	"16"	"0.00856"	"0.1095"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"692.36151"	"1383.71575"	"1383.71563"	"0.08"	"0.00006"	"7/76"	"7"	"76"	"3119185.06750488"	"HCD"	"MS2"	"11.8955"	"282.1"	"100.000"	"42.1477"	"12130"	"12130"	"12104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"469.7"	""	"301.3"	""	"325.9"	""	"501.5"	""	"547.5"	"530.1"	""	"701"	"39"	"35.000"	"28.000"	"0.00422365097100315"	"26"	"0.0001686"	"0.001194"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNDGTDEK"	"[R].fNDGTDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"692.36151"	"1383.71575"	"1383.71563"	"0.08"	"0.00006"	"12/76"	"12"	"76"	"3813917.96990967"	"HCD"	"MS2"	"5.486018"	"349.9"	"100.000"	"42.0417"	"12121"	"12121"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"592.6"	""	"355.9"	""	"408.4"	""	"577.6"	""	"695.7"	"689.5"	""	"701"	"30"	"35.000"	"28.000"	"0.0377301057377257"	"26"	"0.0001991"	"0.00384"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPQAMK"	"[K].gDYPQAmk.[H]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"692.37018"	"1383.73308"	"1383.73426"	"-0.85"	"-0.00059"	"11/62"	"11"	"62"	"622227.645996094"	"HCD"	"MS2"	"15.29272"	"48.0"	"100.000"	"36.7046"	"9961"	"9961"	"9936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.8"	""	"50.2"	""	"62.1"	""	"87.0"	""	"92.1"	"89.3"	""	"718"	"19"	"35.000"	"28.000"	"0.459297888192551"	"24"	"0.004234"	"0.04793"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDYPQAMK"	"[K].gDYPQAmk.[H]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"O35814"	"Stress-induced-phosphoprotein 1 OS=Rattus norvegicus OX=10116 GN=Stip1 PE=1 SV=1"	"0"	"2"	"2"	"0.4828"	"0.0000"	"1"	"1"	"1"	"692.37085"	"1383.73442"	"1383.73426"	"0.12"	"0.00008"	"7/62"	"7"	"62"	"594215.31048584"	"HCD"	"MS2"	"22.31416"	"44.0"	"100.000"	"36.7868"	"9957"	"9957"	"9933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.3"	""	"55.4"	""	"58.3"	""	"75.9"	""	"78.9"	"78.2"	""	"714"	"29"	"35.000"	"28.000"	"0.0405198861195017"	""	"0.0001991"	"0.00542"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDPLSDNPR"	"[R].iQDPLSDNPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"692.37433"	"1383.74138"	"1383.74296"	"-1.14"	"-0.00079"	"9/96"	"9"	"96"	"1215063.375"	"HCD"	"MS2"	"26.86071"	"71.4"	"100.000"	"59.6287"	"19264"	"19264"	"19243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.1"	""	"108.7"	""	"113.9"	""	"106.9"	""	"123.0"	"119.2"	""	"714"	"50"	"35.000"	"28.000"	"0.000352913454792527"	"27"	"0"	"1.029E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDPLSDNPR"	"[R].iQDPLSDNPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"Q68FP2"	"Serum paraoxonase/lactonase 3 OS=Rattus norvegicus OX=10116 GN=Pon3 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"692.37500"	"1383.74272"	"1383.74296"	"-0.17"	"-0.00012"	"9/96"	"9"	"96"	"1265812.61450195"	"HCD"	"MS2"	"42.14988"	"79.9"	"100.000"	"59.7922"	"19297"	"19297"	"19274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.3"	""	"131.0"	""	"116.7"	""	"119.4"	""	"151.4"	"128.6"	""	"694"	"42"	"35.000"	"28.000"	"0.00232985811965306"	"25"	"0"	"9.156E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.87201"	"1384.73674"	"1384.73821"	"-1.06"	"-0.00073"	"6/88"	"6"	"88"	"338430.993347168"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"29.1656"	"6925"	"6925"	"6901"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.7"	""	"25.1"	""	"28.7"	""	"40.6"	""	"40.6"	"40.9"	""	"677"	"28"	"35.000"	"28.000"	"0.0542698564748579"	"14"	"0.002084"	"0.01869"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9855"	"0.0000"	"1"	"1"	"1"	"462.25064"	"1384.73737"	"1384.73821"	"-0.61"	"-0.00028"	"10/88"	"10"	"88"	"12564959.6807861"	"HCD"	"MS2"	"45.59629"	"379.7"	"100.000"	"29.0621"	"6883"	"6883"	"6865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"509.7"	""	"433.7"	""	"466.0"	""	"711.2"	""	"728.9"	"762.6"	""	"655"	"69"	"35.000"	"28.000"	"4.01986348204379E-06"	"18"	"0"	"5.298E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"462.25067"	"1384.73746"	"1384.73821"	"-0.54"	"-0.00025"	"10/88"	"10"	"88"	"15143250.7770386"	"HCD"	"MS2"	"36.51189"	"359.5"	"80.265"	"29.2901"	"6935"	"6935"	"6915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"498.2"	""	"414.3"	""	"426.2"	""	"663.9"	""	"673.8"	"739.0"	""	"655"	"68"	"35.000"	"28.000"	"5.19052520531015E-06"	"21"	"0"	"5.808E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDDHTLIR"	"[K].gAGTDDHTLIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"692.87262"	"1384.73796"	"1384.73821"	"-0.18"	"-0.00012"	"10/88"	"10"	"88"	"369063.893310547"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"29.3521"	"6961"	"6961"	"6930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"25.7"	""	"22.2"	""	"41.6"	"1.0"	"50.1"	"46.0"	""	"661"	"25"	"35.000"	"28.000"	"0.0942261537410042"	"14"	"0.0003294"	"0.006177"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNYNTLER"	"[R].vFNYNTLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"692.87390"	"1384.74053"	"1384.74223"	"-1.23"	"-0.00085"	"5/80"	"5"	"80"	"315602.738098145"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"82.0446"	"28324"	"28324"	"28295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"29.8"	""	"32.1"	""	"37.5"	""	"42.2"	"39.8"	""	"687"	"26"	"35.000"	"28.000"	"0.0950444455198854"	"16"	"0.0009352"	"0.008348"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNYNTLER"	"[R].vFNYNTLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"692.87433"	"1384.74138"	"1384.74223"	"-0.61"	"-0.00042"	"6/80"	"6"	"80"	"459990.213684082"	"HCD"	"MS2"	"4.497671"	"32.4"	"100.000"	"82.3585"	"28451"	"28451"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.9"	""	"44.9"	""	"44.1"	""	"49.9"	""	"68.9"	"55.9"	""	"683"	"43"	"35.000"	"28.000"	"0.00192039562552504"	"19"	"0"	"0.000379"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNYNTLER"	"[R].vFNYNTLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"692.87488"	"1384.74248"	"1384.74223"	"0.18"	"0.00012"	"6/80"	"6"	"80"	"378435.700317383"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"82.4785"	"28524"	"28524"	"28505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"32.5"	""	"34.9"	""	"38.2"	"1.2"	"50.0"	"48.0"	""	"687"	"28"	"35.000"	"28.000"	"0.0490825074748564"	"19"	"0.0001686"	"0.001594"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFNYNTLER"	"[R].vFNYNTLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"692.87500"	"1384.74272"	"1384.74223"	"0.36"	"0.00025"	"5/80"	"5"	"80"	"342117.153747559"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"82.1504"	"28395"	"28395"	"28366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"27.0"	""	"29.6"	""	"39.3"	""	"50.3"	"45.3"	""	"685"	"25"	"35.000"	"28.000"	"0.0971987267241232"	"16"	"0.0001991"	"0.00231"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSNSYAIK"	"[K].gSSNSYAIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"692.89435"	"1384.78142"	"1384.78365"	"-1.61"	"-0.00112"	"8/80"	"8"	"80"	"2073622.58905029"	"HCD"	"MS2"	"9.244096"	"181.7"	"100.000"	"41.5842"	"11935"	"11935"	"11910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.3"	""	"252.5"	""	"258.5"	""	"316.0"	"1.9"	"342.6"	"284.6"	""	"666"	"33"	"35.000"	"28.000"	"0.0153618752328606"	""	"9.9E-05"	"0.0005777"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSNSYAIK"	"[K].gSSNSYAIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"P24050"	"40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"692.89496"	"1384.78264"	"1384.78365"	"-0.73"	"-0.00051"	"14/80"	"14"	"80"	"2023194.94134521"	"HCD"	"MS2"	"15.41814"	"171.9"	"100.000"	"41.7080"	"11951"	"11951"	"11922"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.4"	""	"242.2"	""	"252.3"	""	"304.4"	""	"321.0"	"262.0"	""	"644"	"34"	"35.000"	"28.000"	"0.013269540114934"	""	"0"	"0.0002033"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVPSDIAISR"	"[K].tPVPSDIAISR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"692.90295"	"1384.79863"	"1384.79975"	"-0.80"	"-0.00056"	"10/98"	"10"	"98"	"3491192.5748291"	"HCD"	"MS2"	"0"	"107.5"	"100.000"	"69.3107"	"23158"	"23158"	"23139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.0"	""	"144.3"	""	"147.3"	""	"158.1"	"3.6"	"205.9"	"193.1"	""	"623"	"40"	"34.000"	"27.000"	"0.00290708714698263"	"24"	"9.9E-05"	"0.0004652"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVPSDIAISR"	"[K].tPVPSDIAISR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"692.90332"	"1384.79936"	"1384.79975"	"-0.28"	"-0.00019"	"10/98"	"10"	"98"	"719962.421264648"	"HCD"	"MS2"	"21.44697"	"32.2"	"100.000"	"69.6399"	"23292"	"23292"	"23267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.2"	""	"43.9"	""	"44.4"	""	"44.2"	"0.2"	"64.1"	"64.5"	""	"628"	"30"	"34.000"	"27.000"	"0.031472384475646"	"22"	"0.0001991"	"0.002587"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVPSDIAISR"	"[K].tPVPSDIAISR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"692.90332"	"1384.79936"	"1384.79975"	"-0.28"	"-0.00019"	"10/98"	"10"	"98"	"3005044.54199219"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"69.4413"	"23245"	"23245"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.1"	""	"114.4"	""	"135.7"	""	"147.4"	"0.6"	"205.8"	"176.2"	""	"628"	"42"	"34.000"	"27.000"	"0.00206980603106717"	""	"9.9E-05"	"0.0004137"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVPSDIAISR"	"[K].tPVPSDIAISR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"692.90393"	"1384.80058"	"1384.79975"	"0.61"	"0.00042"	"8/98"	"8"	"98"	"1772215.59515381"	"HCD"	"MS2"	"15.29272"	"79.7"	"100.000"	"69.0162"	"23038"	"23038"	"23016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.6"	""	"106.0"	""	"110.6"	""	"145.8"	""	"152.4"	"136.9"	""	"613"	"11"	"34.000"	"27.000"	"2.54935595842969"	"20"	"0.002755"	"0.02908"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEEPVLK"	"[K].iVEEPVLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"692.94391"	"1384.88054"	"1384.88157"	"-0.75"	"-0.00052"	"7/58"	"7"	"58"	"301420.69744873"	"HCD"	"MS2"	"27.97725"	"23.2"	"100.000"	"88.5411"	"30933"	"30933"	"30914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"32.9"	""	"33.8"	""	"36.4"	""	"43.4"	"42.5"	""	"252"	"40"	"31.000"	"24.000"	"0.00120329065838701"	""	"0"	"0.0001894"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVIELPVK"	"[K].eVIELPVk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"692.94415"	"1384.88103"	"1384.88157"	"-0.39"	"-0.00027"	"6/62"	"6"	"62"	"409679.480895996"	"HCD"	"MS2"	"16.66145"	"28.1"	"100.000"	"100.2951"	"35712"	"35712"	"35691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"32.7"	""	"38.5"	""	"46.2"	""	"57.5"	"57.4"	""	"252"	"35"	"31.000"	"24.000"	"0.00416265621706387"	""	"0.0001686"	"0.001139"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEEPVLK"	"[K].iVEEPVLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"692.94427"	"1384.88127"	"1384.88157"	"-0.22"	"-0.00015"	"7/58"	"7"	"58"	"335945.364501953"	"HCD"	"MS2"	"24.62106"	"25.6"	"100.000"	"88.4682"	"30943"	"30943"	"30928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"36.5"	""	"37.5"	""	"49.6"	""	"48.2"	"43.6"	""	"262"	"44"	"31.000"	"24.000"	"0.000491214632941584"	""	"0"	"3.305E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEEPVLK"	"[K].iVEEPVLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"692.94434"	"1384.88140"	"1384.88157"	"-0.13"	"-0.00009"	"5/58"	"5"	"58"	"181744.497619629"	"HCD"	"MS2"	"16.54424"	"16.6"	"100.000"	"88.8026"	"31079"	"31079"	"31052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"26.7"	""	"17.5"	""	"28.2"	""	"34.4"	"34.8"	""	"262"	"25"	"31.000"	"24.000"	"0.0425864359574919"	"21"	"0.0001991"	"0.004428"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEEPVLK"	"[K].iVEEPVLk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"692.94446"	"1384.88164"	"1384.88157"	"0.05"	"0.00003"	"12/58"	"12"	"58"	"264973.32244873"	"HCD"	"MS2"	"7.993396"	"19.9"	"100.000"	"88.8661"	"31065"	"31065"	"31041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"28.1"	""	"23.7"	""	"33.6"	""	"40.2"	"38.3"	""	"262"	"35"	"31.000"	"24.000"	"0.00458428168807148"	""	"0.0001991"	"0.004977"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVIELPVK"	"[K].eVIELPVk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"692.94458"	"1384.88188"	"1384.88157"	"0.22"	"0.00015"	"6/62"	"6"	"62"	"556402.456481934"	"HCD"	"MS2"	"23.67692"	"37.7"	"100.000"	"100.2525"	"35667"	"35667"	"35649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.9"	""	"43.4"	""	"50.5"	""	"68.5"	""	"76.2"	"71.3"	""	"262"	"29"	"31.000"	"24.000"	"0.0182083794688949"	""	"0.0001686"	"0.001865"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNMFSGLK"	"[R].dNmFSGLk.[I]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"693.38019"	"1385.75310"	"1385.74991"	"2.30"	"0.00160"	"6/76"	"6"	"76"	"620638.364624023"	"HCD"	"MS2"	"9.64095"	"47.4"	"100.000"	"62.4886"	"20390"	"20390"	"20365"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.8"	""	"53.6"	""	"53.9"	""	"95.1"	""	"86.0"	"101.7"	""	"708"	"27"	"35.000"	"28.000"	"0.0787051701290597"	"21"	"0.00981"	"0.1318"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"693.40063"	"1385.79399"	"1385.79499"	"-0.72"	"-0.00050"	"11/94"	"11"	"94"	"1152135.6484375"	"HCD"	"MS2"	"17.73225"	"40.3"	"100.000"	"90.2462"	"31619"	"31619"	"31606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.4"	""	"53.0"	""	"57.2"	""	"65.2"	""	"72.6"	"74.0"	""	"697"	"55"	"35.000"	"28.000"	"0.000117274281927359"	"18"	"0"	"1.699E-07"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"693.40082"	"1385.79436"	"1385.79499"	"-0.46"	"-0.00032"	"10/94"	"10"	"94"	"1140455.94018555"	"HCD"	"MS2"	"21.73228"	"42.2"	"100.000"	"90.1345"	"31612"	"31612"	"31600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"55.7"	""	"60.6"	""	"64.2"	""	"71.9"	"80.3"	""	"693"	"53"	"35.000"	"28.000"	"0.000163193643596544"	"19"	"0"	"1.12E-06"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLIDAGVDALR"	"[K].nLIDAGVDALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"693.40094"	"1385.79460"	"1385.79499"	"-0.28"	"-0.00020"	"9/108"	"9"	"108"	"782043.264343262"	"HCD"	"MS2"	"36.36023"	"39.6"	"100.000"	"103.2038"	"36859"	"36859"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.5"	""	"49.5"	""	"52.0"	""	"73.6"	""	"62.0"	"71.0"	""	"696"	"59"	"35.000"	"28.000"	"3.94983763853965E-05"	""	"0"	"1.264E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"693.40100"	"1385.79473"	"1385.79499"	"-0.19"	"-0.00013"	"11/94"	"11"	"94"	"681541.218322754"	"HCD"	"MS2"	"31.23469"	"38.7"	"100.000"	"89.5466"	"31377"	"31377"	"31362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.4"	""	"62.2"	""	"57.9"	""	"58.6"	"0.2"	"63.6"	"66.9"	""	"697"	"72"	"35.000"	"28.000"	"1.97789294984879E-06"	"22"	"0"	"5.673E-08"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLIDAGVDALR"	"[K].nLIDAGVDALR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"693.40125"	"1385.79521"	"1385.79499"	"0.16"	"0.00011"	"8/108"	"8"	"108"	"754799.995361328"	"HCD"	"MS2"	"26.04657"	"37.8"	"100.000"	"103.4847"	"36989"	"36989"	"36972"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.1"	""	"44.6"	""	"50.7"	""	"66.1"	"1.5"	"64.2"	"71.9"	""	"697"	"58"	"35.000"	"28.000"	"4.96824246370363E-05"	""	"0"	"2.683E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"693.40125"	"1385.79521"	"1385.79499"	"0.16"	"0.00011"	"10/94"	"10"	"94"	"3568715.67932129"	"HCD"	"MS2"	"0.640088"	"143.3"	"100.000"	"89.9744"	"31509"	"31509"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"235.5"	""	"197.7"	""	"209.6"	""	"223.5"	"0.2"	"240.7"	"248.4"	""	"697"	"70"	"35.000"	"28.000"	"3.16375454767098E-06"	""	"0"	"2.478E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"693.40143"	"1385.79558"	"1385.79499"	"0.42"	"0.00029"	"10/94"	"10"	"94"	"749236.08416748"	"HCD"	"MS2"	"28.66313"	"39.2"	"100.000"	"89.6584"	"31382"	"31382"	"31368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.2"	""	"53.6"	""	"55.9"	""	"60.3"	"0.1"	"69.8"	"62.4"	""	"690"	"69"	"35.000"	"28.000"	"3.99778187873518E-06"	"24"	"0"	"2.003E-08"	"1.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIAGLGDVAEVR"	"[R].gIAGLGDVAEVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"693.40143"	"1385.79558"	"1385.79499"	"0.42"	"0.00029"	"9/94"	"9"	"94"	"3564004.76782227"	"HCD"	"MS2"	"0.7672481"	"140.7"	"100.000"	"89.8465"	"31498"	"31498"	"31483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"221.4"	""	"212.1"	""	"220.4"	""	"201.7"	"1.0"	"232.0"	"241.8"	""	"690"	"74"	"35.000"	"28.000"	"1.52692988465106E-06"	"26"	"0"	"2.626E-08"	"1.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVHTEWTQR"	"[R].tVHTEWTQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"462.91516"	"1386.73093"	"1386.73273"	"-1.30"	"-0.00060"	"5/78"	"5"	"78"	"5061652.41522217"	"HCD"	"MS2"	"26.23155"	"109.0"	"100.000"	"31.0240"	"7630"	"7630"	"7610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.6"	""	"147.4"	""	"151.9"	""	"148.8"	"2.0"	"207.6"	"206.3"	""	"657"	"26"	"35.000"	"28.000"	"0.0761264142514645"	"20"	"0.0001991"	"0.005312"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVHTEWTQR"	"[R].tVHTEWTQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"462.91544"	"1386.73175"	"1386.73273"	"-0.70"	"-0.00032"	"7/78"	"7"	"78"	"5985404.71008301"	"HCD"	"MS2"	"24.41906"	"123.3"	"100.000"	"30.9246"	"7628"	"7628"	"7609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.3"	""	"168.8"	""	"163.3"	""	"171.2"	"0.7"	"225.2"	"263.5"	""	"689"	"26"	"35.000"	"28.000"	"0.0834044506600613"	"23"	"0.0001991"	"0.002534"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVHTEWTQR"	"[R].tVHTEWTQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.86981"	"1386.73235"	"1386.73273"	"-0.27"	"-0.00019"	"4/78"	"4"	"78"	"113097.232421875"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"31.0348"	"7673"	"7673"	"7649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"14.1"	""	"11.2"	""	"15.2"	""	"18.4"	"18.7"	""	"680"	"16"	"35.000"	"28.000"	"0.85601015543801"	"13"	"0.007069"	"0.08979"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"693.86981"	"1386.73235"	"1386.73392"	"-1.14"	"-0.00079"	"7/66"	"7"	"66"	"2387503.91998291"	"HCD"	"MS2"	"0"	"228.7"	"100.000"	"44.7372"	"13185"	"13185"	"13169"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"392.9"	""	"368.9"	""	"359.5"	""	"259.9"	"0.7"	"400.6"	"380.1"	""	"680"	"38"	"35.000"	"28.000"	"0.00488066407340243"	"25"	"0.0001686"	"0.001144"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"693.87024"	"1386.73320"	"1386.73392"	"-0.52"	"-0.00036"	"7/66"	"7"	"66"	"448587.813964844"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"44.7719"	"13233"	"13233"	"13215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.2"	""	"64.1"	""	"82.7"	""	"56.5"	""	"95.6"	"87.7"	""	"679"	"25"	"35.000"	"28.000"	"0.10347603489787"	"17"	"0.0001686"	"0.001038"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAMGEEYK"	"[K].tAMGEEYk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"693.87024"	"1386.73320"	"1386.73392"	"-0.52"	"-0.00036"	"7/66"	"7"	"66"	"1785761.6036377"	"HCD"	"MS2"	"18.54973"	"179.8"	"100.000"	"44.4763"	"13114"	"13114"	"13100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"317.4"	""	"265.2"	""	"274.5"	""	"209.4"	"0.3"	"308.8"	"325.3"	""	"679"	"39"	"35.000"	"28.000"	"0.00451689274903562"	"25"	"0.0001686"	"0.001196"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIQSQLDGVR"	"[K].aAIQSQLDGVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62825"	"Exocyst complex component 3 OS=Rattus norvegicus OX=10116 GN=Exoc3 PE=1 SV=1"	"Q62825"	"Exocyst complex component 3 OS=Rattus norvegicus OX=10116 GN=Exoc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"693.89795"	"1386.78862"	"1386.79024"	"-1.17"	"-0.00081"	"6/100"	"6"	"100"	"300670.844848633"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"56.7552"	"18095"	"18095"	"18069"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.2"	""	"41.2"	""	"35.7"	""	"50.0"	"0.6"	"66.7"	"55.1"	""	"799"	"21"	"36.000"	"29.000"	"0.349556018203361"	"19"	"0.002189"	"0.02045"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIQSQLDGVR"	"[K].aAIQSQLDGVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62825"	"Exocyst complex component 3 OS=Rattus norvegicus OX=10116 GN=Exoc3 PE=1 SV=1"	"Q62825"	"Exocyst complex component 3 OS=Rattus norvegicus OX=10116 GN=Exoc3 PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"693.89868"	"1386.79009"	"1386.79024"	"-0.11"	"-0.00008"	"7/100"	"7"	"100"	"243391.303405762"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"56.7107"	"18042"	"18042"	"18020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"21.3"	""	"32.2"	""	"36.6"	""	"44.2"	"35.6"	""	"794"	"45"	"35.000"	"28.000"	"0.0011797514146"	""	"0.0001991"	"0.004642"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIQSQLDGVR"	"[K].aAIQSQLDGVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62825"	"Exocyst complex component 3 OS=Rattus norvegicus OX=10116 GN=Exoc3 PE=1 SV=1"	"Q62825"	"Exocyst complex component 3 OS=Rattus norvegicus OX=10116 GN=Exoc3 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"693.89935"	"1386.79143"	"1386.79024"	"0.86"	"0.00059"	"6/100"	"6"	"100"	"244652.396728516"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"56.4506"	"17972"	"17972"	"17955"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.1"	""	"26.6"	""	"27.4"	""	"35.4"	""	"52.5"	"41.6"	""	"782"	"25"	"35.000"	"28.000"	"0.11302558340049"	"25"	"0.0007633"	"0.007294"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEIAPGDK"	"[K].aQEIAPGDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"693.90265"	"1386.79802"	"1386.79930"	"-0.92"	"-0.00064"	"8/88"	"8"	"88"	"1318210.56774902"	"HCD"	"MS2"	"0"	"91.5"	"100.000"	"41.3227"	"11829"	"11829"	"11798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.6"	""	"103.7"	""	"116.4"	""	"164.3"	""	"164.1"	"162.8"	""	"703"	"46"	"35.000"	"28.000"	"0.00083738529347958"	"28"	"0.0001686"	"0.001055"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"693.92078"	"1386.83428"	"1386.83569"	"-1.02"	"-0.00070"	"6/88"	"6"	"88"	"1372756.09411621"	"HCD"	"MS2"	"34.15693"	"90.9"	"100.000"	"53.0345"	"16552"	"16552"	"16522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.4"	""	"132.7"	""	"127.9"	""	"149.6"	""	"151.5"	"164.5"	""	"628"	"48"	"34.000"	"27.000"	"0.000503419052676672"	"27"	"0"	"6.646E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"462.94977"	"1386.83475"	"1386.83569"	"-0.67"	"-0.00031"	"10/88"	"10"	"88"	"3916094.06262207"	"HCD"	"MS2"	"18.39111"	"134.9"	"100.000"	"52.9955"	"16570"	"16570"	"16546"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.5"	""	"181.1"	""	"200.4"	""	"240.2"	""	"245.2"	"252.6"	""	"629"	"38"	"34.000"	"27.000"	"0.00461977314318997"	"26"	"0"	"0.0003829"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"693.92102"	"1386.83476"	"1386.83569"	"-0.66"	"-0.00046"	"14/88"	"14"	"88"	"9187995.92663574"	"HCD"	"MS2"	"0.6093501"	"516.0"	"100.000"	"52.9381"	"16547"	"16547"	"16530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"681.5"	""	"689.8"	""	"724.5"	""	"928.3"	""	"899.4"	"969.3"	""	"629"	"51"	"34.000"	"27.000"	"0.000255047252695033"	""	"0"	"0.000237"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"693.92108"	"1386.83489"	"1386.83569"	"-0.58"	"-0.00040"	"14/88"	"14"	"88"	"2679591.77111816"	"HCD"	"MS2"	"0"	"156.5"	"100.000"	"53.2487"	"16673"	"16673"	"16657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"186.2"	""	"210.3"	""	"222.9"	""	"277.5"	""	"278.7"	"308.9"	""	"629"	"51"	"34.000"	"27.000"	"0.000255047252695033"	""	"0"	"0.0001128"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"462.94989"	"1386.83512"	"1386.83569"	"-0.41"	"-0.00019"	"10/88"	"10"	"88"	"3784463.07940674"	"HCD"	"MS2"	"16.60446"	"138.2"	"100.000"	"53.3248"	"16670"	"16670"	"16650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.8"	""	"185.5"	""	"202.6"	""	"247.8"	""	"243.2"	"262.9"	""	"629"	"40"	"34.000"	"27.000"	"0.00323311125760776"	"27"	"9.9E-05"	"0.0004581"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"693.92120"	"1386.83513"	"1386.83569"	"-0.40"	"-0.00028"	"14/88"	"14"	"88"	"1775943.69415283"	"HCD"	"MS2"	"0"	"113.2"	"100.000"	"53.6329"	"16796"	"16796"	"16777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.1"	""	"147.6"	""	"171.7"	""	"203.1"	"0.3"	"186.7"	"224.7"	""	"629"	"51"	"34.000"	"27.000"	"0.000259788935142023"	""	"0"	"7.923E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"693.92126"	"1386.83525"	"1386.83569"	"-0.31"	"-0.00022"	"7/88"	"7"	"88"	"9645197.08935547"	"HCD"	"MS2"	"0.5502277"	"552.2"	"100.000"	"53.3154"	"16667"	"16667"	"16650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"692.5"	""	"711.7"	""	"844.2"	""	"1009.1"	"6.5"	"942.1"	"1024.0"	""	"633"	"60"	"35.000"	"28.000"	"2.87987550788108E-05"	""	"0"	"0.0001869"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPANIGVTK"	"[K].ePANIGVTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"693.92194"	"1386.83660"	"1386.83569"	"0.66"	"0.00045"	"7/88"	"7"	"88"	"910463.589294434"	"HCD"	"MS2"	"17.424"	"61.4"	"100.000"	"52.6571"	"16432"	"16432"	"16404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.6"	""	"85.4"	""	"78.5"	""	"103.3"	""	"112.1"	"111.2"	""	"650"	"56"	"35.000"	"28.000"	"8.27719832090139E-05"	"24"	"0"	"0.0001149"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEHSIDGK"	"[K].gSEHSIDGk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.25775"	"1387.75870"	"1387.75816"	"0.39"	"0.00018"	"10/74"	"10"	"74"	"7143523.63079834"	"HCD"	"MS2"	"48.81985"	"319.1"	"100.000"	"25.0736"	"5263"	"5263"	"5252"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"391.5"	""	"367.4"	""	"347.2"	""	"590.5"	""	"657.2"	"684.1"	""	"781"	"16"	"35.000"	"28.000"	"0.880280412345524"	"14"	"0.002525"	"0.025"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSEHSIDGK"	"[K].gSEHSIDGk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.25809"	"1387.75971"	"1387.75816"	"1.11"	"0.00051"	"11/74"	"11"	"74"	"7893257.77502441"	"HCD"	"MS2"	"52.17982"	"359.7"	"100.000"	"24.9150"	"5236"	"5236"	"5216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"430.0"	""	"428.0"	""	"398.6"	""	"660.0"	""	"729.0"	"772.5"	""	"764"	"18"	"35.000"	"28.000"	"0.559839275245159"	"14"	"0.002673"	"0.02823"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYNVDYK"	"[K].qYNVDYk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"694.38446"	"1387.76164"	"1387.76219"	"-0.39"	"-0.00027"	"12/60"	"12"	"60"	"516617.629089355"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"51.9912"	"16126"	"16126"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.1"	""	"65.5"	""	"76.4"	""	"83.1"	""	"99.0"	"96.0"	""	"761"	"34"	"35.000"	"28.000"	"0.0146000606909812"	"18"	"0.0001991"	"0.003509"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYNVDYK"	"[K].qYNVDYk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.38580"	"1387.76433"	"1387.76219"	"1.54"	"0.00107"	"6/60"	"6"	"60"	"438981.624572754"	"HCD"	"MS2"	"29.25512"	"46.9"	"100.000"	"51.6231"	"16011"	"16011"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.5"	""	"56.0"	""	"63.2"	""	"79.3"	""	"86.8"	"83.5"	""	"800"	"32"	"36.000"	"29.000"	"0.0246638000744593"	"15"	"0.0005778"	"0.007064"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSLQEILER"	"[K].gNSLQEILER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"694.38983"	"1387.77239"	"1387.77426"	"-1.35"	"-0.00094"	"7/100"	"7"	"100"	"412816.432983398"	"HCD"	"MS2"	"17.00982"	"28.8"	"100.000"	"89.5937"	"31356"	"31356"	"31341"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.3"	""	"30.3"	""	"40.5"	""	"50.5"	""	"56.6"	"59.9"	""	"843"	"37"	"36.000"	"29.000"	"0.00932819420098776"	"25"	"0.0001686"	"0.00147"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSLQEILER"	"[K].gNSLQEILER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"694.39001"	"1387.77275"	"1387.77426"	"-1.09"	"-0.00075"	"7/100"	"7"	"100"	"545461.931518555"	"HCD"	"MS2"	"26.01633"	"34.5"	"100.000"	"89.4148"	"31325"	"31325"	"31316"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.6"	""	"39.3"	""	"40.2"	""	"68.6"	""	"70.4"	"61.7"	""	"845"	"36"	"36.000"	"29.000"	"0.00965665494426119"	"20"	"0"	"0.0001148"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSLQEILER"	"[K].gNSLQEILER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"694.39020"	"1387.77312"	"1387.77426"	"-0.82"	"-0.00057"	"8/100"	"8"	"100"	"908684.377197266"	"HCD"	"MS2"	"25.91466"	"51.7"	"100.000"	"89.2977"	"31238"	"31238"	"31225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.4"	""	"51.8"	""	"56.0"	""	"104.7"	""	"113.7"	"91.4"	""	"847"	"46"	"36.000"	"29.000"	"0.00105403107429259"	"24"	"0"	"1.783E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSLQEILER"	"[K].gNSLQEILER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"Q9Z1A6"	"Vigilin OS=Rattus norvegicus OX=10116 GN=Hdlbp PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"694.39063"	"1387.77397"	"1387.77426"	"-0.21"	"-0.00014"	"9/100"	"9"	"100"	"837147.771484375"	"HCD"	"MS2"	"27.81351"	"48.4"	"100.000"	"89.1443"	"31216"	"31216"	"31201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"52.0"	""	"48.6"	""	"109.0"	"1.2"	"99.5"	"94.1"	""	"846"	"37"	"36.000"	"29.000"	"0.00753946218630542"	"19"	"0"	"6.864E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"463.26910"	"1387.79276"	"1387.79455"	"-1.29"	"-0.00060"	"6/76"	"6"	"76"	"32619468.8422852"	"HCD"	"MS2"	"7.041564"	"510.9"	"41.917"	"24.7916"	"5151"	"5151"	"5135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"672.4"	""	"653.5"	""	"761.4"	""	"829.5"	""	"941.4"	"992.1"	""	"850"	"34"	"36.000"	"29.000"	"0.0163075579334219"	"27"	"9.9E-05"	"0.0006229"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"463.26935"	"1387.79349"	"1387.79455"	"-0.76"	"-0.00035"	"6/76"	"6"	"76"	"32515725.6452637"	"HCD"	"MS2"	"7.244128"	"576.8"	"44.747"	"24.6582"	"5134"	"5134"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"765.9"	""	"730.6"	""	"855.6"	""	"920.2"	""	"1072.5"	"1126.7"	""	"838"	"34"	"36.000"	"29.000"	"0.0166423259227696"	"27"	"0"	"0.0003527"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"694.40112"	"1387.79497"	"1387.79455"	"0.30"	"0.00021"	"14/76"	"14"	"76"	"775511.848388672"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"24.7709"	"5142"	"5142"	"5121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.0"	""	"78.3"	""	"91.2"	""	"102.9"	""	"115.7"	"125.2"	""	"888"	"49"	"36.000"	"29.000"	"0.000561542938277191"	""	"0"	"1.944E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGTHLEAK"	"[R].sSGTHLEAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.6275"	"0.0000"	"1"	"1"	"1"	"694.40125"	"1387.79521"	"1387.79455"	"0.48"	"0.00033"	"14/76"	"14"	"76"	"950408.51373291"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"24.6809"	"5143"	"5143"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.7"	""	"88.4"	""	"126.5"	""	"117.7"	""	"124.7"	"138.4"	""	"889"	"51"	"36.000"	"29.000"	"0.000370571286563428"	""	"0"	"4.703E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTPTPDGK"	"[R].tLTPTPDGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"694.41394"	"1387.82060"	"1387.81970"	"0.65"	"0.00045"	"7/76"	"7"	"76"	"1685000.2925415"	"HCD"	"MS2"	"12.96011"	"113.6"	"100.000"	"49.1515"	"14974"	"14974"	"14952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.4"	""	"166.9"	""	"164.7"	""	"177.1"	""	"191.1"	"201.6"	""	"791"	"28"	"35.000"	"28.000"	"0.0637010348713006"	"22"	"0.002328"	"0.02212"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLTPTPDGK"	"[R].tLTPTPDGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"Q9Z1I6"	"Rho guanine nucleotide exchange factor 1 OS=Rattus norvegicus OX=10116 GN=Arhgef1 PE=2 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"694.41498"	"1387.82268"	"1387.81970"	"2.15"	"0.00149"	"7/76"	"7"	"76"	"2029951.85662842"	"HCD"	"MS2"	"34.60984"	"132.6"	"100.000"	"48.8396"	"14882"	"14882"	"14864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.7"	""	"178.9"	""	"179.2"	""	"218.2"	""	"258.8"	"226.4"	""	"766"	"28"	"35.000"	"28.000"	"0.0626900727706851"	"23"	"0.002525"	"0.02518"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEQAALK"	"[R].aQAEQAALk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4468"	"0.0000"	"1"	"1"	"1"	"694.41815"	"1387.82903"	"1387.83094"	"-1.37"	"-0.00095"	"14/78"	"14"	"78"	"1045270.00286865"	"HCD"	"MS2"	"0"	"84.6"	"100.000"	"41.1163"	"11715"	"11715"	"11697"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.8"	""	"108.5"	""	"112.5"	""	"125.6"	"0.2"	"149.7"	"187.6"	""	"711"	"47"	"35.000"	"28.000"	"0.000693169755213985"	""	"0"	"5.491E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEQAALK"	"[R].aQAEQAALk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5532"	"0.0000"	"1"	"1"	"1"	"694.41846"	"1387.82964"	"1387.83094"	"-0.94"	"-0.00065"	"14/78"	"14"	"78"	"1197754.39160156"	"HCD"	"MS2"	"21.14909"	"98.2"	"100.000"	"41.0095"	"11706"	"11706"	"11689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.3"	""	"120.1"	""	"130.7"	""	"141.1"	"2.2"	"191.4"	"212.6"	""	"707"	"47"	"35.000"	"28.000"	"0.000672031171952887"	""	"0"	"7.953E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEAEAVLK"	"[K].gLEAEAVLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"463.29013"	"1387.85584"	"1387.85609"	"-0.18"	"-0.00008"	"7/68"	"7"	"68"	"1226302.62182617"	"HCD"	"MS2"	"25.13868"	"37.5"	"100.000"	"84.2555"	"29243"	"29243"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"50.8"	""	"57.2"	""	"59.6"	"1.0"	"75.7"	"63.3"	""	"601"	"27"	"34.000"	"27.000"	"0.054430769783219"	"23"	"9.9E-05"	"0.0004454"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEAEAVLK"	"[K].gLEAEAVLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"694.43158"	"1387.85588"	"1387.85609"	"-0.15"	"-0.00010"	"8/68"	"8"	"68"	"2684845.22961426"	"HCD"	"MS2"	"14.91195"	"175.7"	"100.000"	"84.2416"	"29237"	"29237"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.2"	""	"260.8"	""	"270.8"	""	"254.5"	""	"313.8"	"329.5"	""	"601"	"42"	"34.000"	"27.000"	"0.00187001235693332"	"25"	"0"	"0.000142"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEAEAVLK"	"[K].gLEAEAVLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"694.43158"	"1387.85588"	"1387.85609"	"-0.15"	"-0.00010"	"8/68"	"8"	"68"	"2615676.59869385"	"HCD"	"MS2"	"17.90774"	"176.7"	"100.000"	"84.2468"	"29211"	"29211"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.5"	""	"241.3"	""	"273.1"	""	"251.8"	""	"329.7"	"333.3"	""	"601"	"38"	"34.000"	"27.000"	"0.00481775239902357"	"25"	"0"	"0.0001009"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEAEAVLK"	"[K].gLEAEAVLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"694.43164"	"1387.85600"	"1387.85609"	"-0.06"	"-0.00004"	"8/68"	"8"	"68"	"754610.776000977"	"HCD"	"MS2"	"45.93573"	"59.5"	"100.000"	"83.9261"	"29081"	"29081"	"29061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.9"	""	"78.3"	""	"88.0"	""	"94.4"	""	"114.6"	"111.9"	""	"601"	"56"	"34.000"	"27.000"	"7.42753105577347E-05"	""	"0"	"1.364E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEAEAVLK"	"[K].gLEAEAVLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"694.43182"	"1387.85637"	"1387.85609"	"0.20"	"0.00014"	"13/68"	"13"	"68"	"697297.63494873"	"HCD"	"MS2"	"60.1879"	"54.1"	"100.000"	"83.9252"	"29110"	"29110"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.5"	""	"70.6"	""	"61.2"	""	"95.2"	"0.0"	"105.9"	"99.0"	""	"601"	"31"	"34.000"	"27.000"	"0.0259922859592096"	"25"	"0"	"7.212E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"694.88098"	"1388.75469"	"1388.75744"	"-1.98"	"-0.00137"	"9/60"	"9"	"60"	"385590.300292969"	"HCD"	"MS2"	"100"	"35.6"	"100.000"	"29.8074"	"7185"	"7185"	"7164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"46.8"	""	"45.4"	""	"53.7"	""	"69.2"	"78.1"	""	"875"	"15"	"36.000"	"29.000"	"1.35200425172469"	"23"	"0.002525"	"0.02464"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"694.88287"	"1388.75847"	"1388.75744"	"0.75"	"0.00052"	"9/60"	"9"	"60"	"416022.321289063"	"HCD"	"MS2"	"100"	"37.4"	"100.000"	"29.9484"	"7202"	"7202"	"7182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"45.6"	""	"48.5"	""	"66.8"	"0.6"	"69.3"	"71.1"	""	"946"	"13"	"36.000"	"29.000"	"2.26392033668608"	"22"	"0.002462"	"0.0232"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59134"	"1388.75946"	"1388.75744"	"1.46"	"0.00068"	"8/60"	"8"	"60"	"9281940.5333252"	"HCD"	"MS2"	"6.708591"	"367.9"	"100.000"	"29.9499"	"7242"	"7242"	"7227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"492.8"	""	"457.6"	""	"471.5"	""	"600.6"	""	"720.6"	"749.9"	""	"929"	"21"	"36.000"	"29.000"	"0.399931597889747"	"15"	"0.003904"	"0.04213"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59134"	"1388.75946"	"1388.75744"	"1.46"	"0.00068"	"8/60"	"8"	"60"	"9281940.5333252"	"HCD"	"MS2"	"6.708591"	"367.9"	"100.000"	"29.9499"	"7242"	"7242"	"7227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"492.8"	""	"457.6"	""	"471.5"	""	"600.6"	""	"720.6"	"749.9"	""	"929"	"21"	"36.000"	"29.000"	"0.399931597889747"	"15"	"0.005426"	"0.06859"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59140"	"1388.75965"	"1388.75744"	"1.59"	"0.00074"	"8/60"	"8"	"60"	"8813907.50067139"	"HCD"	"MS2"	"5.071912"	"358.4"	"99.785"	"30.1045"	"7264"	"7264"	"7250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"456.1"	"3.2"	"428.3"	""	"478.0"	""	"556.6"	""	"709.7"	"773.9"	""	"921"	"22"	"36.000"	"29.000"	"0.307064517222873"	"15"	"0.002189"	"0.02083"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59140"	"1388.75965"	"1388.75744"	"1.59"	"0.00074"	"8/60"	"8"	"60"	"8813907.50067139"	"HCD"	"MS2"	"5.071912"	"358.4"	"99.785"	"30.1045"	"7264"	"7264"	"7250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"456.1"	"3.2"	"428.3"	""	"478.0"	""	"556.6"	""	"709.7"	"773.9"	""	"921"	"22"	"36.000"	"29.000"	"0.307064517222873"	"15"	"0.002875"	"0.03124"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59232"	"1388.76239"	"1388.75744"	"3.57"	"0.00165"	"7/60"	"7"	"60"	"6052237.00860596"	"HCD"	"MS2"	"9.953837"	"248.0"	"100.000"	"29.6400"	"7118"	"7118"	"7101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.3"	""	"319.4"	""	"323.8"	""	"419.9"	""	"477.4"	"483.1"	""	"914"	"16"	"36.000"	"29.000"	"1.270328963366"	"13"	"0.004275"	"0.05028"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59232"	"1388.76239"	"1388.75744"	"3.57"	"0.00165"	"7/60"	"7"	"60"	"6052237.00860596"	"HCD"	"MS2"	"9.953837"	"248.0"	"100.000"	"29.6400"	"7118"	"7118"	"7101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.3"	""	"319.4"	""	"323.8"	""	"419.9"	""	"477.4"	"483.1"	""	"914"	"16"	"36.000"	"29.000"	"1.270328963366"	"13"	"0.006814"	"0.08487"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEEGHPFK"	"[K].sEEGHPFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"463.59244"	"1388.76276"	"1388.75744"	"3.83"	"0.00177"	"8/60"	"8"	"60"	"9635182.13739014"	"HCD"	"MS2"	"4.146224"	"384.3"	"100.000"	"29.8226"	"7152"	"7152"	"7141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"538.7"	""	"496.1"	""	"473.1"	""	"636.8"	""	"776.8"	"727.6"	""	"914"	"22"	"36.000"	"29.000"	"0.304029832384196"	"15"	"0.003529"	"0.03859"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TDEGHPFK"	"[].tDEGHPFk.[]"	"N-Term(TMT6plex); K8(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"463.59244"	"1388.76276"	"1388.75744"	"3.83"	"0.00177"	"8/60"	"8"	"60"	"9635182.13739014"	"HCD"	"MS2"	"4.146224"	"384.3"	"100.000"	"29.8226"	"7152"	"7152"	"7141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"538.7"	""	"496.1"	""	"473.1"	""	"636.8"	""	"776.8"	"727.6"	""	"914"	"22"	"36.000"	"29.000"	"0.304029832384196"	"15"	"0.004959"	"0.06276"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSQGPTFGIK"	"[R].QPSQGPTFGIk.[G]"	"K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"694.88586"	"1388.76445"	"1388.77353"	"-6.54"	"-0.00454"	"5/108"	"5"	"108"	"225737.727050781"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"93.1151"	"32812"	"32812"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"16.3"	""	"17.0"	""	"16.7"	""	"23.6"	"23.0"	""	"932"	"25"	"36.000"	"29.000"	"0.136894473781407"	"24"	"0.003208"	"0.03476"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSQGPTFGIK"	"[R].QPSQGPTFGIk.[G]"	"K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"694.88831"	"1388.76933"	"1388.77353"	"-3.02"	"-0.00210"	"5/108"	"5"	"108"	"241116.096130371"	"HCD"	"MS2"	"18.90605"	"11.6"	"100.000"	"93.2377"	"32825"	"32825"	"32799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"21.1"	""	"17.8"	""	"17.8"	""	"17.5"	"19.2"	""	"1010"	"23"	"37.000"	"30.000"	"0.260790266482396"	"14"	"0.0005161"	"0.006862"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSQGPTFGIK"	"[R].QPSQGPTFGIk.[G]"	"K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"694.89008"	"1388.77287"	"1388.77353"	"-0.47"	"-0.00033"	"7/108"	"7"	"108"	"547166.74395752"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"93.4153"	"32932"	"32932"	"32915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"29.6"	""	"27.4"	""	"31.0"	""	"38.7"	"32.1"	""	"1001"	"47"	"36.000"	"30.000"	"0.00101019236502262"	"17"	"0.001348"	"0.01089"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSQGPTFGIK"	"[R].QPSQGPTFGIk.[G]"	"K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"694.89050"	"1388.77373"	"1388.77353"	"0.14"	"0.00010"	"7/108"	"7"	"108"	"493919.878479004"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"93.5358"	"32945"	"32945"	"32923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"31.5"	""	"30.6"	""	"31.1"	""	"35.3"	"36.1"	""	"1006"	"43"	"37.000"	"30.000"	"0.00261557986256358"	"17"	"0.00212"	"0.01902"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEVIADK"	"[K].qQEVIADk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"694.90833"	"1388.80937"	"1388.81495"	"-4.02"	"-0.00279"	"7/78"	"7"	"78"	"814492.428283691"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"42.6327"	"12328"	"12328"	"12298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.6"	""	"78.0"	""	"84.4"	""	"125.3"	""	"145.0"	"169.4"	""	"849"	"48"	"36.000"	"29.000"	"0.000641029025442681"	"28"	"9.9E-05"	"0.0006463"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEVIADK"	"[K].qQEVIADk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"694.90894"	"1388.81059"	"1388.81495"	"-3.14"	"-0.00218"	"7/78"	"7"	"78"	"746330.739196777"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"42.6742"	"12345"	"12345"	"12314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.3"	""	"66.1"	""	"60.7"	""	"111.1"	""	"138.8"	"127.9"	""	"878"	"44"	"36.000"	"29.000"	"0.00162354570923537"	"26"	"0"	"0.0003828"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDAALNK"	"[K].lEGDAALNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"694.91022"	"1388.81316"	"1388.81495"	"-1.29"	"-0.00090"	"8/70"	"8"	"70"	"937532.77130127"	"HCD"	"MS2"	"0"	"83.9"	"100.000"	"61.9632"	"20176"	"20176"	"20151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.8"	""	"91.2"	""	"95.6"	""	"155.8"	""	"155.9"	"195.3"	""	"818"	"40"	"36.000"	"29.000"	"0.00393299421858919"	"28"	"0.0001991"	"0.005424"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEVIADK"	"[K].qQEVIADk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"694.91034"	"1388.81340"	"1388.81495"	"-1.12"	"-0.00077"	"12/78"	"12"	"78"	"666289.93371582"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"42.5637"	"12334"	"12334"	"12303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.4"	""	"52.3"	""	"56.8"	""	"94.8"	""	"117.0"	"106.2"	""	"810"	"37"	"36.000"	"29.000"	"0.00789687062902008"	""	"9.9E-05"	"0.0006241"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDAALNK"	"[K].lEGDAALNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"694.91046"	"1388.81365"	"1388.81495"	"-0.94"	"-0.00065"	"8/70"	"8"	"70"	"959034.473327637"	"HCD"	"MS2"	"0"	"81.0"	"100.000"	"61.8194"	"20151"	"20151"	"20133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.0"	""	"88.7"	""	"89.5"	""	"154.4"	""	"163.0"	"174.5"	""	"811"	"43"	"36.000"	"29.000"	"0.00201832387958959"	""	"0"	"0.0001178"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETLPEK"	"[K].tLETLPEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"694.92310"	"1388.83891"	"1388.84010"	"-0.86"	"-0.00059"	"5/68"	"5"	"68"	"572222.151306152"	"HCD"	"MS2"	"35.22208"	"40.1"	"100.000"	"71.1191"	"23924"	"23924"	"23909"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"41.3"	""	"53.5"	""	"71.1"	""	"85.0"	"77.1"	""	"728"	"32"	"35.000"	"28.000"	"0.0221871430595421"	""	"0.001453"	"0.01187"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLETLPEK"	"[K].tLETLPEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"P19356"	"Porphobilinogen deaminase OS=Rattus norvegicus OX=10116 GN=Hmbs PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"694.92340"	"1388.83953"	"1388.84010"	"-0.42"	"-0.00029"	"5/68"	"5"	"68"	"496273.237365723"	"HCD"	"MS2"	"29.21355"	"41.2"	"100.000"	"70.8981"	"23803"	"23803"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.5"	""	"53.1"	""	"52.6"	""	"77.2"	""	"83.2"	"77.0"	""	"729"	"32"	"35.000"	"28.000"	"0.0229983952063031"	""	"0.0001991"	"0.002724"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQSNIVK"	"[K].lEQSNIVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"694.92920"	"1388.85112"	"1388.85134"	"-0.15"	"-0.00011"	"6/70"	"6"	"70"	"404970.047180176"	"HCD"	"MS2"	"24.52729"	"39.6"	"100.000"	"58.6919"	"18885"	"18885"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"45.4"	""	"46.9"	""	"72.0"	""	"77.5"	"78.2"	""	"658"	"20"	"35.000"	"28.000"	"0.293897504148254"	"18"	"0.008893"	"0.1147"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQSNIVK"	"[K].lEQSNIVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"694.92950"	"1388.85173"	"1388.85134"	"0.29"	"0.00020"	"6/70"	"6"	"70"	"456822.971618652"	"HCD"	"MS2"	"45.95821"	"44.8"	"100.000"	"58.9291"	"18946"	"18946"	"18917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"48.0"	""	"59.7"	""	"72.8"	""	"102.3"	"85.4"	""	"658"	"22"	"35.000"	"28.000"	"0.188884316066211"	"19"	"0.007069"	"0.08996"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTYENVER"	"[K].hLTYENVER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"463.91553"	"1389.73203"	"1389.73239"	"-0.26"	"-0.00012"	"9/80"	"9"	"80"	"2912003.62738037"	"HCD"	"MS2"	"45.86041"	"101.6"	"100.000"	"33.2276"	"8555"	"8555"	"8532"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.3"	""	"143.1"	""	"161.3"	""	"139.1"	""	"193.1"	"181.3"	""	"802"	"23"	"36.000"	"29.000"	"0.18287080329647"	"17"	"0.0001991"	"0.002738"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTYENVER"	"[K].hLTYENVER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.91586"	"1389.73304"	"1389.73239"	"0.46"	"0.00021"	"9/80"	"9"	"80"	"2880818.39746094"	"HCD"	"MS2"	"40.07063"	"95.5"	"100.000"	"33.3151"	"8553"	"8553"	"8534"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.4"	""	"122.8"	""	"135.4"	""	"150.2"	""	"190.0"	"171.1"	""	"800"	"23"	"36.000"	"29.000"	"0.2094401746343"	"14"	"0.0001991"	"0.002482"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"695.37897"	"1389.75066"	"1389.75268"	"-1.46"	"-0.00101"	"7/76"	"7"	"76"	"3295091.90185547"	"HCD"	"MS2"	"0"	"267.1"	"100.000"	"46.0158"	"13741"	"13741"	"13717"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"535.1"	""	"303.7"	""	"363.6"	""	"456.3"	""	"428.0"	"438.8"	""	"829"	"30"	"36.000"	"29.000"	"0.0416413245070395"	"17"	"0.0001991"	"0.005989"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"695.37927"	"1389.75127"	"1389.75268"	"-1.02"	"-0.00071"	"7/76"	"7"	"76"	"575893.779602051"	"HCD"	"MS2"	"39.72974"	"57.0"	"100.000"	"45.6870"	"13607"	"13607"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.9"	""	"70.6"	""	"77.4"	""	"99.7"	"0.4"	"91.4"	"90.0"	""	"883"	"41"	"36.000"	"29.000"	"0.00379254469744632"	"17"	"9.9E-05"	"0.0006983"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.37933"	"1389.75139"	"1389.75268"	"-0.93"	"-0.00065"	"6/76"	"6"	"76"	"305469.63873291"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"46.8731"	"14085"	"14085"	"14064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.3"	""	"43.0"	""	"52.6"	""	"61.2"	""	"66.8"	"58.3"	""	"883"	"25"	"36.000"	"29.000"	"0.146869192779303"	"14"	"0.007069"	"0.08976"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"695.37946"	"1389.75163"	"1389.75268"	"-0.76"	"-0.00053"	"11/76"	"11"	"76"	"1221628.97180176"	"HCD"	"MS2"	"0"	"111.6"	"100.000"	"46.0955"	"13739"	"13739"	"13713"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.0"	""	"129.3"	""	"136.4"	""	"200.8"	"2.4"	"190.8"	"171.0"	""	"883"	"35"	"36.000"	"29.000"	"0.0142866599534431"	"17"	"0.0001991"	"0.002125"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"695.37952"	"1389.75176"	"1389.75268"	"-0.67"	"-0.00046"	"7/76"	"7"	"76"	"2904845.94207764"	"HCD"	"MS2"	"15.80027"	"257.5"	"100.000"	"46.5771"	"13964"	"13964"	"13951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"475.5"	""	"310.3"	""	"382.8"	""	"437.3"	""	"390.8"	"439.5"	""	"883"	"34"	"36.000"	"29.000"	"0.0159562454355389"	"17"	"0.0001991"	"0.002681"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"695.37970"	"1389.75212"	"1389.75268"	"-0.40"	"-0.00028"	"7/76"	"7"	"76"	"1123057.5592041"	"HCD"	"MS2"	"11.38714"	"103.8"	"100.000"	"47.0094"	"14102"	"14102"	"14086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.3"	""	"121.0"	""	"143.5"	""	"173.5"	""	"163.9"	"194.4"	""	"882"	"32"	"36.000"	"29.000"	"0.0281474197410032"	"16"	"9.9E-05"	"0.001023"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"695.37970"	"1389.75212"	"1389.75268"	"-0.40"	"-0.00028"	"7/76"	"7"	"76"	"6389168.12927246"	"HCD"	"MS2"	"9.936307"	"540.8"	"100.000"	"46.2816"	"13847"	"13847"	"13840"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1074.5"	""	"626.4"	""	"763.0"	""	"898.2"	""	"861.1"	"887.9"	""	"882"	"41"	"36.000"	"29.000"	"0.00364282735763536"	"18"	"0.0001991"	"0.004408"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"695.37970"	"1389.75212"	"1389.75268"	"-0.40"	"-0.00028"	"7/76"	"7"	"76"	"6227491.35290527"	"HCD"	"MS2"	"5.223944"	"536.0"	"100.000"	"46.7093"	"13982"	"13982"	"13970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1050.4"	""	"648.2"	""	"754.2"	""	"896.4"	""	"831.9"	"888.4"	""	"882"	"44"	"36.000"	"29.000"	"0.00193392037718769"	"19"	"0.0001991"	"0.003365"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"695.38000"	"1389.75273"	"1389.75268"	"0.03"	"0.00002"	"6/76"	"6"	"76"	"5456281.83825684"	"HCD"	"MS2"	"23.6777"	"400.6"	"100.000"	"46.4237"	"13870"	"13870"	"13862"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"756.4"	"3.3"	"454.1"	""	"551.5"	""	"669.3"	""	"670.7"	"687.5"	""	"894"	"20"	"36.000"	"29.000"	"0.47896912944121"	"16"	"0.001615"	"0.01454"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"695.38971"	"1389.77214"	"1389.77868"	"-4.70"	"-0.00327"	"10/86"	"10"	"86"	"381558.913330078"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"98.2198"	"34843"	"34843"	"34829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"27.2"	""	"25.0"	""	"28.3"	""	"40.5"	"47.2"	""	"851"	"18"	"36.000"	"29.000"	"0.616452423683296"	"17"	"0.002462"	"0.02301"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSAGSSPPSK"	"[R].nSAGSSPPSk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O70535"	"Leukemia inhibitory factor receptor OS=Rattus norvegicus OX=10116 GN=Lifr PE=2 SV=1"	"O70535"	"Leukemia inhibitory factor receptor OS=Rattus norvegicus OX=10116 GN=Lifr PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.39008"	"1389.77287"	"1389.77381"	"-0.68"	"-0.00047"	"11/104"	"11"	"104"	"293251.794616699"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"25.1377"	"5288"	"5288"	"5272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"22.1"	""	"27.1"	""	"53.1"	""	"57.0"	"49.5"	""	"846"	"31"	"36.000"	"29.000"	"0.0316475698716218"	"14"	"0"	"0.0003841"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSAGSSPPSK"	"[R].nSAGSSPPSk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O70535"	"Leukemia inhibitory factor receptor OS=Rattus norvegicus OX=10116 GN=Lifr PE=2 SV=1"	"O70535"	"Leukemia inhibitory factor receptor OS=Rattus norvegicus OX=10116 GN=Lifr PE=2 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"695.39069"	"1389.77410"	"1389.77381"	"0.20"	"0.00014"	"11/104"	"11"	"104"	"296599.131164551"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"24.9561"	"5253"	"5253"	"5232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.4"	""	"27.9"	""	"21.6"	""	"41.1"	""	"53.7"	"45.5"	""	"871"	"34"	"36.000"	"29.000"	"0.0175787568637392"	"18"	"9.9E-05"	"0.0006432"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"695.39197"	"1389.77666"	"1389.77868"	"-1.45"	"-0.00101"	"7/86"	"7"	"86"	"852644.393066406"	"HCD"	"MS2"	"5.556346"	"43.2"	"100.000"	"97.6243"	"34602"	"34602"	"34583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.2"	""	"60.7"	""	"56.9"	""	"65.8"	""	"82.0"	"77.1"	""	"843"	"59"	"36.000"	"29.000"	"5.75171792072231E-05"	""	"0"	"4.06E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"695.39221"	"1389.77715"	"1389.77868"	"-1.10"	"-0.00076"	"7/86"	"7"	"86"	"1378150.08288574"	"HCD"	"MS2"	"5.712113"	"64.5"	"100.000"	"97.7053"	"34666"	"34666"	"34647"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.6"	""	"84.8"	""	"100.0"	""	"91.2"	"0.5"	"106.7"	"125.3"	""	"842"	"59"	"36.000"	"29.000"	"5.16751916317689E-05"	""	"0"	"2.292E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"695.39270"	"1389.77812"	"1389.77868"	"-0.40"	"-0.00028"	"7/86"	"7"	"86"	"2283104.66760254"	"HCD"	"MS2"	"0"	"103.1"	"100.000"	"98.0077"	"34789"	"34789"	"34773"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"177.2"	""	"125.0"	""	"152.2"	""	"146.7"	"0.6"	"163.0"	"211.1"	""	"863"	"60"	"36.000"	"29.000"	"4.69873335273376E-05"	""	"0"	"2.373E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAETTLLELR"	"[R].dAETTLLELR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6949"	"0.0000"	"1"	"1"	"1"	"695.39276"	"1389.77825"	"1389.77868"	"-0.31"	"-0.00021"	"8/86"	"8"	"86"	"3002382.75048828"	"HCD"	"MS2"	"0"	"127.3"	"100.000"	"97.9224"	"34724"	"34724"	"34707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.7"	""	"170.5"	""	"209.0"	""	"190.0"	"0.7"	"206.2"	"243.2"	""	"865"	"59"	"36.000"	"29.000"	"5.49523300502694E-05"	""	"0"	"8.329E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"695.39349"	"1389.77971"	"1389.78121"	"-1.08"	"-0.00075"	"11/66"	"11"	"66"	"465144.632446289"	"HCD"	"MS2"	"25.97165"	"45.4"	"100.000"	"65.1052"	"21486"	"21486"	"21463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.3"	""	"50.0"	""	"55.9"	""	"73.2"	""	"94.4"	"93.7"	""	"848"	"34"	"36.000"	"29.000"	"0.0158622889427351"	"24"	"0.001103"	"0.009087"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"695.39392"	"1389.78057"	"1389.78121"	"-0.46"	"-0.00032"	"7/66"	"7"	"66"	"903431.365722656"	"HCD"	"MS2"	"15.66665"	"76.2"	"100.000"	"65.7765"	"21726"	"21726"	"21707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.4"	""	"86.6"	""	"90.7"	""	"116.3"	"1.0"	"161.7"	"170.4"	""	"842"	"29"	"36.000"	"29.000"	"0.0492359243619366"	"24"	"0.0001686"	"0.001818"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"695.39398"	"1389.78069"	"1389.78121"	"-0.37"	"-0.00026"	"11/66"	"11"	"66"	"1798910.83630371"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"65.3957"	"21604"	"21604"	"21584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.8"	""	"144.9"	""	"142.7"	""	"196.2"	""	"253.3"	"263.2"	""	"842"	"33"	"36.000"	"29.000"	"0.0202900022800178"	"22"	"0.0001686"	"0.001873"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"695.39398"	"1389.78069"	"1389.78121"	"-0.37"	"-0.00026"	"7/66"	"7"	"66"	"1346615.88592529"	"HCD"	"MS2"	"0"	"108.9"	"100.000"	"65.7020"	"21729"	"21729"	"21710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.4"	""	"115.3"	""	"124.9"	""	"160.1"	""	"225.1"	"263.3"	""	"842"	"31"	"36.000"	"29.000"	"0.0345368000162853"	"22"	"0.0001686"	"0.00137"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"695.39423"	"1389.78118"	"1389.78121"	"-0.02"	"-0.00002"	"12/66"	"12"	"66"	"2033633.22875977"	"HCD"	"MS2"	"0"	"146.5"	"100.000"	"65.4658"	"21600"	"21600"	"21583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.4"	""	"166.1"	""	"183.7"	""	"204.6"	""	"306.6"	"319.5"	""	"879"	"36"	"36.000"	"29.000"	"0.0112968894652691"	"22"	"0.0001686"	"0.001305"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVMPEVNk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"695.39441"	"1389.78154"	"1389.78121"	"0.24"	"0.00017"	"7/66"	"7"	"66"	"801361.691650391"	"HCD"	"MS2"	"18.36508"	"67.5"	"100.000"	"65.1755"	"21481"	"21481"	"21457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.9"	""	"77.7"	""	"82.2"	""	"104.1"	""	"134.7"	"149.6"	""	"822"	"32"	"36.000"	"29.000"	"0.0272798401935184"	"24"	"0.00212"	"0.01938"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIEENIK"	"[R].sVIEENIk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"695.41821"	"1389.82915"	"1389.83535"	"-4.46"	"-0.00310"	"11/68"	"11"	"68"	"333345.890197754"	"HCD"	"MS2"	"100"	"34.8"	"100.000"	"64.0397"	"21053"	"21053"	"21033"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.0"	""	"41.3"	""	"44.8"	""	"51.0"	""	"75.3"	"70.0"	""	"898"	"25"	"36.000"	"29.000"	"0.156403454451169"	"21"	"0.0001991"	"0.003901"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIEENIK"	"[R].sVIEENIk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"695.41882"	"1389.83037"	"1389.83535"	"-3.58"	"-0.00249"	"7/68"	"7"	"68"	"535566.606811523"	"HCD"	"MS2"	"38.05229"	"51.2"	"100.000"	"63.9814"	"20997"	"20997"	"20984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.6"	""	"60.5"	""	"75.8"	""	"64.0"	"0.3"	"95.4"	"114.9"	""	"933"	"43"	"36.000"	"29.000"	"0.00261728880819147"	""	"0"	"0.0003553"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"3"	"3"	"0.2105"	"0.0000"	"1"	"1"	"1"	"463.94949"	"1389.83393"	"1389.81506"	"13.57"	"0.00629"	"11/114"	"11"	"114"	"3654362.14666748"	"HCD"	"MS2"	"13.60216"	"129.3"	"100.000"	"68.0600"	"22650"	"22650"	"22628"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.3"	""	"185.9"	""	"178.2"	""	"215.7"	"0.1"	"247.4"	"241.4"	""	"891"	"38"	"36.000"	"29.000"	"0.00735948981111027"	"18"	"0.007831"	"0.09987"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2333"	"0.0000"	"1"	"1"	"1"	"695.42084"	"1389.83440"	"1389.81506"	"13.91"	"0.00967"	"9/114"	"9"	"114"	"8596011.72149658"	"HCD"	"MS2"	"0"	"334.4"	"100.000"	"68.1454"	"22685"	"22685"	"22668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"416.3"	""	"456.8"	"1.4"	"465.1"	""	"552.3"	""	"620.7"	"661.0"	""	"909"	"60"	"36.000"	"29.000"	"4.31056191570258E-05"	"26"	"0.001488"	"0.01268"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2542"	"0.0000"	"1"	"1"	"1"	"695.42108"	"1389.83489"	"1389.81506"	"14.26"	"0.00991"	"7/114"	"7"	"114"	"5044259.27868652"	"HCD"	"MS2"	"6.380171"	"216.6"	"100.000"	"68.5705"	"22891"	"22891"	"22874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"240.6"	""	"289.4"	""	"288.3"	""	"323.5"	"4.7"	"443.9"	"470.0"	""	"914"	"59"	"36.000"	"29.000"	"5.45652563740174E-05"	"24"	"0.001261"	"0.009717"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2542"	"0.0000"	"1"	"1"	"1"	"695.42114"	"1389.83501"	"1389.81506"	"14.35"	"0.00997"	"7/114"	"7"	"114"	"6093490.58795166"	"HCD"	"MS2"	"3.731932"	"243.6"	"100.000"	"68.4588"	"22813"	"22813"	"22796"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.9"	""	"324.1"	""	"344.7"	""	"376.2"	"2.1"	"470.5"	"504.6"	""	"916"	"59"	"36.000"	"29.000"	"5.2828159208206E-05"	"25"	"0.006267"	"0.07682"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2333"	"0.0000"	"1"	"1"	"1"	"695.42120"	"1389.83513"	"1389.81506"	"14.44"	"0.01003"	"9/114"	"9"	"114"	"9966535.57818604"	"HCD"	"MS2"	"0"	"358.1"	"100.000"	"68.2571"	"22763"	"22763"	"22746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"441.0"	""	"493.1"	""	"481.2"	""	"586.8"	""	"697.9"	"701.0"	""	"915"	"60"	"36.000"	"29.000"	"4.33901446960161E-05"	"26"	"0.001049"	"0.008553"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVQNILK"	"[R].nTVqnILk.[G]"	"N-Term(TMT6plex); Q4(Deamidated); N5(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q6AY31"	"Uncharacterized protein C4orf36 homolog OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"Q6AY31"	"Uncharacterized protein C4orf36 homolog OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"695.42126"	"1389.83525"	"1389.83535"	"-0.07"	"-0.00005"	"12/70"	"12"	"70"	"378024.047180176"	"HCD"	"MS2"	"18.25138"	"32.9"	"100.000"	"85.7780"	"29829"	"29829"	"29808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.0"	""	"33.2"	""	"34.0"	""	"61.3"	"1.1"	"61.4"	"83.4"	""	"913"	"30"	"36.000"	"29.000"	"0.044100222625885"	"29"	"0.0001991"	"0.002123"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"695.42126"	"1389.83525"	"1389.81506"	"14.53"	"0.01010"	"16/114"	"16"	"114"	"1838692.44744873"	"HCD"	"MS2"	"7.51536"	"142.2"	"100.000"	"67.9694"	"22645"	"22645"	"22626"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.7"	""	"201.2"	""	"195.8"	""	"226.4"	"0.3"	"260.4"	"267.1"	""	"913"	"66"	"36.000"	"29.000"	"1.26310886113035E-05"	"25"	"0.0001686"	"0.001561"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEGVVEITGK"	"[K].TKEGVVEITGk.[H]"	"K11(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"1"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"695.42139"	"1389.83550"	"1389.81506"	"14.70"	"0.01022"	"16/114"	"16"	"114"	"1233189.60205078"	"HCD"	"MS2"	"24.05029"	"96.4"	"100.000"	"67.8642"	"22571"	"22571"	"22552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.5"	""	"144.3"	""	"133.1"	""	"165.5"	"2.8"	"167.2"	"170.7"	""	"913"	"66"	"36.000"	"29.000"	"1.28363272907711E-05"	"27"	"9.9E-05"	"0.0009905"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTVQNILK"	"[R].nTVqnILk.[G]"	"N-Term(TMT6plex); Q4(Deamidated); N5(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q6AY31"	"Uncharacterized protein C4orf36 homolog OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"Q6AY31"	"Uncharacterized protein C4orf36 homolog OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"695.42175"	"1389.83623"	"1389.83535"	"0.63"	"0.00044"	"12/70"	"12"	"70"	"457248.922912598"	"HCD"	"MS2"	"13.83748"	"39.8"	"100.000"	"85.8237"	"29876"	"29876"	"29861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"39.2"	""	"35.7"	""	"70.8"	""	"86.1"	"95.1"	""	"918"	"32"	"36.000"	"29.000"	"0.0280422389431657"	"29"	"0.0001991"	"0.002231"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEESLKR"	"[K].gIEESLkR.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.95316"	"1389.84491"	"1389.84659"	"-1.20"	"-0.00056"	"5/62"	"5"	"62"	"6986895.82525635"	"HCD"	"MS2"	"11.83764"	"431.4"	"100.000"	"41.9565"	"12086"	"12086"	"12065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"808.5"	""	"640.7"	""	"661.8"	""	"627.3"	""	"666.4"	"671.3"	""	"808"	"18"	"36.000"	"29.000"	"0.60170187539521"	"14"	"0.009348"	"0.1217"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIEESLKR"	"[K].gIEESLkR.[M]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"Q9WVK7"	"Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadh PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.95322"	"1389.84510"	"1389.84659"	"-1.07"	"-0.00050"	"5/62"	"5"	"62"	"6786128.86962891"	"HCD"	"MS2"	"11.17401"	"390.9"	"100.000"	"42.1016"	"12111"	"12111"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"725.7"	""	"577.4"	""	"626.5"	""	"582.5"	""	"546.3"	"633.3"	""	"808"	"13"	"36.000"	"29.000"	"2.05769671907107"	"13"	"0.009084"	"0.1169"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIELDGKR"	"[R].tIELDGkR.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"P35280"	"Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"463.95367"	"1389.84647"	"1389.84659"	"-0.08"	"-0.00004"	"5/66"	"5"	"66"	"1585383.35406494"	"HCD"	"MS2"	"47.18007"	"100.9"	"100.000"	"44.2241"	"13013"	"13013"	"12985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.3"	""	"145.3"	""	"139.4"	""	"168.2"	""	"161.0"	"181.6"	""	"801"	"4"	"36.000"	"29.000"	"15.9441921806675"	"13"	"0.008327"	"0.1065"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"695.87140"	"1390.73552"	"1390.73670"	"-0.85"	"-0.00059"	"7/76"	"7"	"76"	"1271243.60498047"	"HCD"	"MS2"	"9.300799"	"121.7"	"100.000"	"50.7851"	"15673"	"15673"	"15655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.5"	""	"107.7"	""	"131.2"	""	"226.6"	"1.7"	"215.6"	"230.3"	""	"854"	"32"	"36.000"	"29.000"	"0.0261473617266478"	"20"	"0.004819"	"0.05815"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"695.87170"	"1390.73613"	"1390.73670"	"-0.41"	"-0.00028"	"6/76"	"6"	"76"	"1662043.71478271"	"HCD"	"MS2"	"8.75927"	"134.9"	"100.000"	"54.4152"	"17115"	"17115"	"17098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"268.4"	""	"136.3"	""	"165.0"	""	"242.5"	""	"227.5"	"237.3"	""	"854"	"45"	"36.000"	"29.000"	"0.00147037420435946"	"23"	"0.0001686"	"0.001119"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"695.87177"	"1390.73625"	"1390.73670"	"-0.32"	"-0.00022"	"7/76"	"7"	"76"	"1458572.16998291"	"HCD"	"MS2"	"9.331721"	"137.9"	"100.000"	"50.9199"	"15695"	"15695"	"15669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.5"	""	"130.2"	""	"156.4"	""	"268.2"	""	"246.2"	"253.0"	""	"891"	"32"	"36.000"	"29.000"	"0.0274061296792246"	"19"	"0.0001991"	"0.003974"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"695.87183"	"1390.73638"	"1390.73670"	"-0.23"	"-0.00016"	"7/76"	"7"	"76"	"1573438.55633545"	"HCD"	"MS2"	"6.609509"	"127.4"	"100.000"	"54.1024"	"17021"	"17021"	"16999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.5"	""	"115.6"	""	"167.4"	""	"225.5"	""	"237.5"	"230.2"	""	"884"	"34"	"36.000"	"29.000"	"0.0167657223358367"	"23"	"0.00511"	"0.06465"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPDQWSK"	"[K].nGPDQWSk.[L]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"695.87244"	"1390.73760"	"1390.73670"	"0.64"	"0.00045"	"6/76"	"6"	"76"	"4491036.00567627"	"HCD"	"MS2"	"36.19889"	"331.0"	"100.000"	"53.8013"	"16898"	"16898"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"576.2"	""	"323.4"	""	"427.9"	""	"642.2"	"5.1"	"603.5"	"555.1"	""	"883"	"22"	"36.000"	"29.000"	"0.306853236215454"	"21"	"0.001951"	"0.01665"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"695.89355"	"1390.77983"	"1390.78132"	"-1.07"	"-0.00074"	"8/96"	"8"	"96"	"708850.29498291"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"67.3402"	"22390"	"22390"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.0"	""	"45.1"	""	"64.2"	""	"45.7"	"1.5"	"67.5"	"88.8"	""	"1064"	"72"	"37.000"	"30.000"	"3.37218686388685E-06"	"22"	"0"	"0.0003121"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"695.89398"	"1390.78069"	"1390.78132"	"-0.45"	"-0.00032"	"8/96"	"8"	"96"	"686473.960449219"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"67.2884"	"22338"	"22338"	"22311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"41.9"	""	"52.7"	""	"41.5"	""	"72.5"	"88.9"	""	"1048"	"58"	"37.000"	"30.000"	"9.29675287986447E-05"	"22"	"0"	"0.0001367"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9383"	"0.0000"	"1"	"1"	"1"	"695.89404"	"1390.78081"	"1390.78132"	"-0.37"	"-0.00025"	"9/96"	"9"	"96"	"837726.436584473"	"HCD"	"MS2"	"0"	"44.7"	"100.000"	"67.6445"	"22513"	"22513"	"22495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.9"	""	"67.4"	""	"67.8"	""	"56.7"	""	"75.3"	"94.0"	""	"1048"	"81"	"37.000"	"30.000"	"4.29864209228825E-07"	"22"	"0"	"2.667E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].EITALAPSTMk.[I]"	"K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9531"	"0.0000"	"1"	"1"	"1"	"695.89435"	"1390.78142"	"1390.78132"	"0.07"	"0.00005"	"8/96"	"8"	"96"	"896937.713745117"	"HCD"	"MS2"	"0"	"48.7"	"100.000"	"67.5878"	"22459"	"22459"	"22441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.0"	""	"67.1"	""	"73.0"	""	"55.3"	"0.7"	"85.3"	"108.0"	""	"1042"	"64"	"37.000"	"30.000"	"2.0551225438122E-05"	"19"	"0"	"0.0001594"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQADAEK"	"[K].sLAQADAEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"695.90015"	"1390.79302"	"1390.79422"	"-0.86"	"-0.00060"	"8/88"	"8"	"88"	"1505912.77197266"	"HCD"	"MS2"	"0"	"119.0"	"100.000"	"42.1915"	"12148"	"12148"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.8"	""	"135.3"	""	"164.1"	""	"171.0"	"1.4"	"206.3"	"248.4"	""	"1046"	"44"	"37.000"	"30.000"	"0.00194312924817821"	"28"	"0"	"0.0001667"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAQADAEK"	"[K].sLAQADAEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"695.90027"	"1390.79326"	"1390.79422"	"-0.69"	"-0.00048"	"8/88"	"8"	"88"	"1424594.13568115"	"HCD"	"MS2"	"0"	"117.9"	"100.000"	"42.0186"	"12112"	"12112"	"12081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.6"	""	"132.7"	""	"163.8"	""	"170.7"	""	"210.4"	"251.5"	""	"1045"	"43"	"37.000"	"30.000"	"0.00236094730935897"	"27"	"0"	"9.524E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIEETAAK"	"[K].nGIEETAAk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.7292"	"0.0000"	"1"	"1"	"1"	"695.90033"	"1390.79338"	"1390.79422"	"-0.60"	"-0.00042"	"14/84"	"14"	"84"	"917415.394897461"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"38.7256"	"10783"	"10783"	"10754"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.9"	""	"89.3"	""	"102.3"	""	"154.7"	"2.1"	"155.6"	"153.9"	""	"1045"	"48"	"37.000"	"30.000"	"0.000865139805912828"	"29"	"0"	"0.0002136"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLGDADQK"	"[R].sVLGDADQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"695.90051"	"1390.79375"	"1390.79422"	"-0.34"	"-0.00023"	"8/78"	"8"	"78"	"686007.463806152"	"HCD"	"MS2"	"0"	"60.8"	"100.000"	"49.7720"	"15226"	"15226"	"15205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.5"	""	"54.6"	""	"73.4"	""	"105.1"	""	"122.9"	"118.2"	""	"1046"	"51"	"37.000"	"30.000"	"0.000461850787918908"	"27"	"0"	"1.39E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAEELQTK"	"[K].nAEELQTk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.90070"	"1390.79411"	"1390.79422"	"-0.07"	"-0.00005"	"7/78"	"7"	"78"	"461942.083435059"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"39.0629"	"10921"	"10921"	"10890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.6"	""	"38.2"	""	"43.4"	""	"76.7"	"2.9"	"77.1"	"73.2"	""	"1045"	"13"	"37.000"	"30.000"	"2.64902645073533"	"13"	"0.007443"	"0.09521"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVLGDADQK"	"[R].sVLGDADQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"695.90076"	"1390.79424"	"1390.79422"	"0.02"	"0.00001"	"14/78"	"14"	"78"	"768787.099182129"	"HCD"	"MS2"	"0"	"63.8"	"100.000"	"49.4692"	"15138"	"15138"	"15111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.0"	""	"63.7"	""	"72.6"	""	"107.6"	"0.4"	"133.6"	"117.0"	""	"1044"	"51"	"37.000"	"30.000"	"0.000387855989982078"	"27"	"0"	"4.79E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGIEETAAK"	"[K].nGIEETAAk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"Q6AYS8"	"Estradiol 17-beta-dehydrogenase 11 OS=Rattus norvegicus OX=10116 GN=Hsd17b11 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"695.90308"	"1390.79888"	"1390.79422"	"3.35"	"0.00233"	"14/84"	"14"	"84"	"941069.294555664"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"38.8062"	"10780"	"10780"	"10749"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.2"	""	"106.9"	""	"93.0"	""	"137.8"	""	"146.6"	"145.3"	""	"1009"	"46"	"37.000"	"30.000"	"0.00129378219642319"	"27"	"0"	"8.748E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAFPVAGQK"	"[K].dAFPVAGQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"695.90820"	"1390.80913"	"1390.80947"	"-0.25"	"-0.00017"	"8/66"	"8"	"66"	"1408821.61309814"	"HCD"	"MS2"	"19.94544"	"91.6"	"100.000"	"61.5569"	"20012"	"20012"	"19989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.8"	""	"81.2"	""	"102.4"	""	"178.0"	""	"193.6"	"233.6"	""	"938"	"15"	"36.000"	"29.000"	"1.57098790965021"	"19"	"0.001261"	"0.009715"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVNSELVK"	"[R].sGVNSELVk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"695.91852"	"1390.82976"	"1390.83060"	"-0.60"	"-0.00042"	"8/84"	"8"	"84"	"408981.184509277"	"HCD"	"MS2"	"12.58161"	"45.0"	"100.000"	"50.3553"	"15499"	"15499"	"15476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.5"	""	"59.8"	""	"65.3"	""	"67.4"	""	"79.1"	"79.4"	""	"725"	"26"	"35.000"	"28.000"	"0.0980184906989455"	"22"	"0.0009352"	"0.007889"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVNSELVK"	"[R].sGVNSELVk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"695.91876"	"1390.83025"	"1390.83060"	"-0.25"	"-0.00018"	"13/84"	"13"	"84"	"578904.920837402"	"HCD"	"MS2"	"0"	"52.1"	"100.000"	"50.3401"	"15458"	"15458"	"15430"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.9"	""	"85.5"	""	"81.4"	""	"79.5"	""	"94.3"	"79.1"	""	"725"	"44"	"35.000"	"28.000"	"0.0013101107520686"	""	"0"	"7.674E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVNSELVK"	"[R].sGVNSELVk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"695.91901"	"1390.83074"	"1390.83060"	"0.10"	"0.00007"	"8/84"	"8"	"84"	"522914.745300293"	"HCD"	"MS2"	"0"	"58.1"	"100.000"	"50.6417"	"15581"	"15581"	"15558"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.5"	""	"89.6"	""	"85.8"	""	"94.2"	"0.4"	"98.5"	"100.4"	""	"725"	"35"	"35.000"	"28.000"	"0.0127734440752901"	"27"	"0"	"0.0001987"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGVNSELVK"	"[R].sGVNSELVk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"Q6AXS3"	"Protein DEK OS=Rattus norvegicus OX=10116 GN=Dek PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"695.91931"	"1390.83135"	"1390.83060"	"0.54"	"0.00037"	"13/84"	"13"	"84"	"836900.84197998"	"HCD"	"MS2"	"10.69881"	"71.4"	"100.000"	"50.0376"	"15370"	"15370"	"15339"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.7"	""	"122.3"	""	"120.0"	""	"118.5"	"1.6"	"110.2"	"111.0"	""	"724"	"43"	"35.000"	"28.000"	"0.00170493792155697"	"24"	"0"	"3.857E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAMFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"696.34454"	"1391.68181"	"1391.68267"	"-0.62"	"-0.00043"	"8/80"	"8"	"80"	"733587.565002441"	"HCD"	"MS2"	"9.534825"	"53.0"	"100.000"	"69.1151"	"23078"	"23078"	"23062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	""	"72.9"	""	"65.9"	""	"83.2"	""	"106.7"	"98.9"	""	"576"	"51"	"34.000"	"27.000"	"0.000237351777123744"	"25"	"0"	"5.481E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAMFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"696.34454"	"1391.68181"	"1391.68267"	"-0.62"	"-0.00043"	"8/80"	"8"	"80"	"7156795.33605957"	"HCD"	"MS2"	"18.52236"	"403.3"	"100.000"	"68.5415"	"22846"	"22846"	"22828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"550.1"	""	"575.9"	""	"475.3"	""	"591.8"	""	"869.0"	"771.5"	""	"576"	"57"	"34.000"	"27.000"	"5.37517350960385E-05"	"22"	"0"	"2.529E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAMFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"696.34467"	"1391.68205"	"1391.68267"	"-0.44"	"-0.00031"	"8/80"	"8"	"80"	"560600.617126465"	"HCD"	"MS2"	"9.434486"	"41.8"	"100.000"	"69.2180"	"23154"	"23154"	"23136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.0"	""	"56.7"	""	"48.0"	""	"66.4"	"0.5"	"86.3"	"80.0"	""	"576"	"49"	"34.000"	"27.000"	"0.000338370495822585"	"27"	"0"	"9.25E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAMFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"696.34485"	"1391.68242"	"1391.68267"	"-0.18"	"-0.00012"	"8/80"	"8"	"80"	"7256901.48016357"	"HCD"	"MS2"	"18.6294"	"418.0"	"100.000"	"68.6098"	"22907"	"22907"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"557.3"	""	"601.1"	""	"499.7"	""	"596.6"	""	"895.8"	"822.3"	""	"574"	"60"	"34.000"	"27.000"	"3.01218677023217E-05"	"22"	"0"	"3.896E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAMFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"696.34491"	"1391.68254"	"1391.68267"	"-0.09"	"-0.00006"	"8/80"	"8"	"80"	"5226037.99121094"	"HCD"	"MS2"	"0.8204954"	"270.0"	"100.000"	"68.9118"	"23030"	"23030"	"23016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"400.8"	""	"381.5"	""	"298.0"	""	"369.9"	"0.8"	"598.6"	"514.2"	""	"593"	"60"	"34.000"	"27.000"	"2.71659375321173E-05"	"22"	"0"	"2.608E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAMFR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"696.34491"	"1391.68254"	"1391.68267"	"-0.09"	"-0.00006"	"8/80"	"8"	"80"	"6402785.77276611"	"HCD"	"MS2"	"1.431358"	"327.3"	"99.918"	"68.8136"	"22956"	"22956"	"22942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"471.8"	""	"471.9"	""	"356.7"	""	"454.6"	"0.7"	"724.2"	"627.6"	""	"593"	"63"	"34.000"	"27.000"	"1.50669274719206E-05"	"22"	"0"	"2.655E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"696.35913"	"1391.71099"	"1391.71166"	"-0.48"	"-0.00034"	"7/78"	"7"	"78"	"778851.379089355"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"52.1110"	"16175"	"16175"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.7"	""	"73.9"	""	"76.0"	""	"84.6"	"0.9"	"107.6"	"126.6"	""	"716"	"33"	"35.000"	"28.000"	"0.0162137333605496"	"20"	"0"	"0.000196"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"696.35919"	"1391.71111"	"1391.71166"	"-0.40"	"-0.00028"	"7/78"	"7"	"78"	"753056.23638916"	"HCD"	"MS2"	"10.02355"	"59.0"	"100.000"	"51.8093"	"16086"	"16086"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.3"	""	"72.5"	""	"70.2"	""	"85.8"	""	"102.4"	"123.7"	""	"716"	"45"	"35.000"	"28.000"	"0.00120194065898978"	"20"	"0"	"8.191E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETWLSENQR"	"[R].eTWLSENQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"Q9QWN8"	"Spectrin beta chain, non-erythrocytic 2 OS=Rattus norvegicus OX=10116 GN=Sptbn2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"696.35938"	"1391.71147"	"1391.71166"	"-0.13"	"-0.00009"	"5/78"	"5"	"78"	"291358.742858887"	"HCD"	"MS2"	"8.772732"	"28.0"	"100.000"	"52.1229"	"16214"	"16214"	"16187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.1"	""	"29.5"	""	"34.2"	""	"37.7"	""	"57.4"	"63.6"	""	"703"	"12"	"35.000"	"28.000"	"2.34922887025368"	"19"	"0.001827"	"0.0153"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTEAAAADVQR"	"[R].mTEAAAADVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"696.36041"	"1391.71355"	"1391.71503"	"-1.06"	"-0.00074"	"5/94"	"5"	"94"	"190870.196960449"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"40.8398"	"11638"	"11638"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.3"	""	"20.1"	""	"27.2"	""	"31.7"	""	"37.7"	"27.4"	""	"723"	"25"	"35.000"	"28.000"	"0.11724877167179"	"16"	"0.002189"	"0.02065"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAESHTFK"	"[R].gGAESHTFk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63255"	"Cysteine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Crip1 PE=1 SV=2"	"P63255"	"Cysteine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Crip1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"464.59390"	"1391.76715"	"1391.76833"	"-0.85"	"-0.00039"	"11/70"	"11"	"70"	"8903037.78253174"	"HCD"	"MS2"	"29.24023"	"452.0"	"100.000"	"27.5549"	"6236"	"6236"	"6217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"611.5"	""	"496.2"	""	"657.3"	""	"904.3"	""	"876.9"	"744.6"	""	"1039"	"20"	"37.000"	"30.000"	"0.560512822198396"	"19"	"0.0001991"	"0.002844"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGAESHTFK"	"[R].gGAESHTFk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63255"	"Cysteine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Crip1 PE=1 SV=2"	"P63255"	"Cysteine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Crip1 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"464.59390"	"1391.76715"	"1391.76833"	"-0.85"	"-0.00039"	"7/70"	"7"	"70"	"9935356.07995605"	"HCD"	"MS2"	"28.98738"	"525.8"	"100.000"	"27.2557"	"6154"	"6154"	"6137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"734.8"	""	"539.7"	""	"756.3"	""	"1061.5"	""	"1031.6"	"859.9"	""	"1039"	"17"	"37.000"	"30.000"	"1.06557875189988"	"16"	"0.001718"	"0.0151"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLSGADIK"	"[K].dDLSGADIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"696.39227"	"1391.77727"	"1391.77823"	"-0.69"	"-0.00048"	"14/76"	"14"	"76"	"1655238.50134277"	"HCD"	"MS2"	"12.93468"	"143.0"	"100.000"	"60.9505"	"19801"	"19801"	"19787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.6"	""	"173.0"	""	"183.1"	""	"244.2"	""	"269.7"	"264.5"	""	"1004"	"46"	"37.000"	"30.000"	"0.00129033868294997"	""	"0"	"0.0001991"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLSGADIK"	"[K].dDLSGADIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"696.39246"	"1391.77764"	"1391.77823"	"-0.43"	"-0.00030"	"14/76"	"14"	"76"	"1134536.65081787"	"HCD"	"MS2"	"50.24133"	"102.5"	"100.000"	"60.6509"	"19679"	"19679"	"19657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.0"	""	"117.5"	""	"135.0"	""	"186.2"	""	"191.3"	"195.3"	""	"998"	"49"	"36.000"	"29.000"	"0.000615319311781224"	""	"0"	"5.602E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLSGADIK"	"[K].dDLSGADIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6182"	"0.0000"	"1"	"1"	"1"	"696.39264"	"1391.77800"	"1391.77823"	"-0.16"	"-0.00011"	"8/76"	"8"	"76"	"1563336.71673584"	"HCD"	"MS2"	"26.52757"	"142.5"	"100.000"	"60.7893"	"19703"	"19703"	"19679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.6"	""	"163.8"	""	"176.0"	""	"262.9"	""	"268.8"	"271.9"	""	"1003"	"55"	"37.000"	"30.000"	"0.000152851933729844"	""	"0"	"4.193E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDLSGADIK"	"[K].dDLSGADIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"P62193"	"26S proteasome regulatory subunit 4 OS=Rattus norvegicus OX=10116 GN=Psmc1 PE=1 SV=1"	"0"	"2"	"2"	"0.5102"	"0.0000"	"1"	"1"	"1"	"696.39288"	"1391.77849"	"1391.77823"	"0.19"	"0.00013"	"14/76"	"14"	"76"	"1338882.7857666"	"HCD"	"MS2"	"9.250739"	"110.7"	"100.000"	"61.0839"	"19823"	"19823"	"19802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.7"	""	"132.7"	""	"159.8"	""	"179.0"	""	"220.0"	"208.1"	""	"998"	"49"	"36.000"	"29.000"	"0.000587625380786882"	""	"0"	"0.000202"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVSASLK"	"[K].eEAVSASLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"696.40924"	"1391.81120"	"1391.81462"	"-2.45"	"-0.00171"	"13/76"	"13"	"76"	"1388437.52111816"	"HCD"	"MS2"	"0"	"116.4"	"100.000"	"53.5293"	"16788"	"16788"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.6"	""	"107.6"	""	"105.1"	""	"232.9"	""	"272.3"	"289.9"	""	"852"	"43"	"36.000"	"29.000"	"0.00210576352656392"	"28"	"0"	"0.0002326"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLDAVSVK"	"[R].sDLDAVSVk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"696.40967"	"1391.81206"	"1391.81462"	"-1.84"	"-0.00128"	"8/76"	"8"	"76"	"748138.412658691"	"HCD"	"MS2"	"0"	"67.7"	"100.000"	"66.4177"	"21986"	"21986"	"21976"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.9"	""	"74.7"	""	"86.2"	""	"120.1"	""	"123.6"	"145.9"	""	"855"	"57"	"36.000"	"29.000"	"7.65484002600089E-05"	"24"	"0"	"2.531E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDLDAVSVK"	"[R].sDLDAVSVk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"696.40991"	"1391.81255"	"1391.81462"	"-1.49"	"-0.00103"	"8/76"	"8"	"76"	"598074.844482422"	"HCD"	"MS2"	"0"	"57.7"	"100.000"	"66.3983"	"22012"	"22012"	"21998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"63.2"	""	"67.3"	""	"105.4"	""	"107.3"	"129.9"	""	"788"	"57"	"35.000"	"28.000"	"7.6647187215933E-05"	"23"	"0"	"1.797E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVSASLK"	"[K].eEAVSASLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"696.41022"	"1391.81316"	"1391.81462"	"-1.05"	"-0.00073"	"8/76"	"8"	"76"	"2860232.63671875"	"HCD"	"MS2"	"22.20417"	"237.7"	"100.000"	"54.0102"	"16950"	"16950"	"16931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.6"	"3.1"	"206.0"	""	"225.2"	""	"485.8"	""	"537.5"	"551.8"	""	"787"	"32"	"35.000"	"28.000"	"0.0231177060220467"	""	"0"	"0.0003949"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVQETIDK"	"[R].tVQETIDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"696.41241"	"1391.81755"	"1391.81462"	"2.11"	"0.00147"	"12/78"	"12"	"78"	"341170.171142578"	"HCD"	"MS2"	"0"	"33.9"	"100.000"	"48.6333"	"14800"	"14800"	"14776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.4"	""	"41.5"	""	"35.9"	""	"59.3"	"0.4"	"70.0"	"68.3"	""	"735"	"21"	"35.000"	"28.000"	"0.32304077493535"	"20"	"0.002711"	"0.02853"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEAVSASLK"	"[K].eEAVSASLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"696.41357"	"1391.81987"	"1391.81462"	"3.78"	"0.00263"	"7/76"	"7"	"76"	"338071.059204102"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"53.6996"	"16824"	"16824"	"16793"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"34.1"	""	"38.5"	""	"62.9"	"0.7"	"73.2"	"64.9"	""	"742"	"22"	"35.000"	"28.000"	"0.261441128586812"	"24"	"0.001488"	"0.01245"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDNDFLEVR"	"[R].vGDNDFLEVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"D2XV59"	"GTP-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gtpbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.86975"	"1392.73223"	"1392.73206"	"0.12"	"0.00008"	"6/94"	"6"	"94"	"334649.165466309"	"HCD"	"MS2"	"40.06489"	"19.1"	"100.000"	"88.4789"	"30908"	"30908"	"30889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"23.8"	""	"19.3"	""	"36.5"	""	"39.9"	"39.1"	""	"825"	"19"	"36.000"	"29.000"	"0.538795491354384"	"14"	"0.003529"	"0.03898"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMVAAGDNK"	"[K].eMVAAGDNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"P13264"	"Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gls PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"696.88116"	"1392.75505"	"1392.75572"	"-0.48"	"-0.00033"	"12/78"	"12"	"78"	"274874.647033691"	"HCD"	"MS2"	"25.72009"	"24.1"	"100.000"	"40.4274"	"11436"	"11436"	"11405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"33.8"	""	"29.4"	""	"36.0"	""	"43.6"	"44.0"	""	"911"	"23"	"36.000"	"29.000"	"0.203933410052333"	"21"	"0.008364"	"0.1068"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGTVSGEEK"	"[K].aGGTVSGEEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"696.89038"	"1392.77349"	"1392.77348"	"0.00"	"0.00000"	"14/82"	"14"	"82"	"793461.327758789"	"HCD"	"MS2"	"0"	"71.4"	"100.000"	"29.2235"	"6908"	"6908"	"6885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.6"	""	"81.5"	""	"93.8"	""	"121.9"	""	"125.0"	"121.3"	""	"964"	"55"	"36.000"	"29.000"	"0.00016945213233464"	""	"0"	"1.677E-06"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAVAASSAK"	"[K].dDAVAASSAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"696.89056"	"1392.77385"	"1392.77348"	"0.27"	"0.00019"	"9/86"	"9"	"86"	"425192.875305176"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"35.6239"	"9488"	"9488"	"9463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.0"	""	"41.1"	""	"42.5"	""	"76.6"	"0.0"	"86.5"	"73.4"	""	"972"	"56"	"36.000"	"29.000"	"0.000126951041823801"	"25"	"0"	"8.852E-07"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGTVSGEEK"	"[K].aGGTVSGEEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"696.89093"	"1392.77458"	"1392.77348"	"0.79"	"0.00055"	"16/82"	"16"	"82"	"611321.14855957"	"HCD"	"MS2"	"0"	"51.2"	"100.000"	"28.9747"	"6848"	"6848"	"6828"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.6"	""	"59.0"	""	"69.1"	""	"91.8"	""	"85.7"	"86.4"	""	"942"	"50"	"36.000"	"29.000"	"0.000433531748295744"	""	"0"	"2.826E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDAVAASSAK"	"[K].dDAVAASSAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"696.89105"	"1392.77483"	"1392.77348"	"0.97"	"0.00067"	"8/86"	"8"	"86"	"277911.41986084"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"35.6239"	"9525"	"9525"	"9496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.3"	""	"25.4"	""	"28.1"	""	"48.9"	""	"50.1"	"57.2"	""	"942"	"31"	"36.000"	"29.000"	"0.0383725717773815"	"14"	"0"	"0.0001714"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMPPAFIK"	"[R].dmPPAFIk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"464.93634"	"1392.79447"	"1392.79613"	"-1.19"	"-0.00055"	"8/56"	"8"	"56"	"1357437.77105713"	"HCD"	"MS2"	"39.28975"	"52.2"	"100.000"	"76.0342"	"25887"	"25887"	"25865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.4"	"8.0"	"45.5"	""	"51.8"	""	"136.0"	"0.1"	"100.0"	"99.9"	""	"958"	"15"	"36.000"	"29.000"	"1.68785647229351"	"19"	"0.001217"	"0.00948"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMPPAFIK"	"[R].dmPPAFIk.[V]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"464.93661"	"1392.79529"	"1392.79613"	"-0.60"	"-0.00028"	"8/56"	"8"	"56"	"1451206.01702881"	"HCD"	"MS2"	"45.55793"	"52.7"	"100.000"	"76.0535"	"25927"	"25927"	"25897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.9"	"11.8"	"46.6"	""	"56.6"	""	"136.0"	""	"110.5"	"90.7"	""	"949"	"28"	"36.000"	"29.000"	"0.0809536093581982"	"16"	"0.001615"	"0.01403"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEESITK"	"[R].vEEESITk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25; O55156"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2; CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus OX=10116 GN=Clip2 PE=1 SV=1"	"0"	"2"	"2"	"0.7174"	"0.0000"	"1"	"1"	"1"	"696.90210"	"1392.79692"	"1392.79863"	"-1.23"	"-0.00085"	"7/66"	"7"	"66"	"551154.184692383"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"50.0731"	"15349"	"15349"	"15324"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.4"	""	"51.2"	""	"63.9"	""	"77.0"	""	"99.0"	"93.2"	""	"882"	"46"	"36.000"	"29.000"	"0.0010825266318171"	"29"	"0"	"0.0003849"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEESITK"	"[R].vEEESITk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25; O55156"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2; CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus OX=10116 GN=Clip2 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"696.90308"	"1392.79888"	"1392.79863"	"0.18"	"0.00012"	"7/66"	"7"	"66"	"559713.266662598"	"HCD"	"MS2"	"9.474186"	"45.6"	"100.000"	"49.7429"	"15249"	"15249"	"15228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"55.0"	""	"55.1"	""	"82.3"	"1.3"	"94.6"	"88.0"	""	"885"	"44"	"36.000"	"29.000"	"0.00180681328452216"	""	"0"	"0.0002336"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"696.90802"	"1392.80876"	"1392.80987"	"-0.79"	"-0.00055"	"7/78"	"7"	"78"	"370245.1015625"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"33.7169"	"8755"	"8755"	"8729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.0"	""	"38.8"	""	"37.1"	""	"66.7"	""	"63.8"	"72.0"	""	"805"	"45"	"36.000"	"29.000"	"0.00129349836680273"	"24"	"0"	"0.0003833"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"696.90808"	"1392.80889"	"1392.80987"	"-0.70"	"-0.00049"	"7/78"	"7"	"78"	"2937946.60894775"	"HCD"	"MS2"	"0"	"220.6"	"100.000"	"33.3906"	"8622"	"8622"	"8592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"369.9"	""	"247.8"	""	"231.0"	""	"396.3"	"0.7"	"426.4"	"419.2"	""	"805"	"46"	"36.000"	"29.000"	"0.00112658998115283"	"27"	"9.9E-05"	"0.0008922"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"696.90820"	"1392.80913"	"1392.80987"	"-0.53"	"-0.00037"	"7/78"	"7"	"78"	"464739.402587891"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"33.8297"	"8763"	"8763"	"8739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"42.3"	""	"45.5"	""	"80.4"	"0.0"	"82.1"	"82.1"	""	"805"	"42"	"36.000"	"29.000"	"0.00230020151260427"	"22"	"9.9E-05"	"0.0004908"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTQTTIK"	"[R].eNTQTTIk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"696.90820"	"1392.80913"	"1392.80987"	"-0.53"	"-0.00037"	"7/78"	"7"	"78"	"2505306.95172119"	"HCD"	"MS2"	"7.074862"	"188.3"	"100.000"	"33.5104"	"8633"	"8633"	"8604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"343.2"	""	"209.7"	""	"212.7"	""	"326.6"	""	"357.7"	"336.3"	""	"805"	"45"	"36.000"	"29.000"	"0.00118240398491452"	"27"	"0.0001686"	"0.00149"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITVPDTYEAR"	"[R].iTVPDTYEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"697.37958"	"1393.75188"	"1393.75246"	"-0.42"	"-0.00029"	"6/84"	"6"	"84"	"391037.609619141"	"HCD"	"MS2"	"18.35217"	"24.8"	"100.000"	"70.2433"	"23571"	"23571"	"23547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"29.3"	""	"30.4"	""	"43.2"	"1.1"	"47.8"	"41.6"	""	"897"	"19"	"36.000"	"29.000"	"0.567234251840811"	"20"	"0.009846"	"0.133"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITVPDTYEAR"	"[R].iTVPDTYEAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"697.38043"	"1393.75359"	"1393.75246"	"0.81"	"0.00056"	"6/84"	"6"	"84"	"399251.139831543"	"HCD"	"MS2"	"24.85394"	"27.9"	"100.000"	"70.1863"	"23514"	"23514"	"23496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"35.9"	""	"40.3"	""	"45.3"	"0.7"	"44.8"	"53.3"	""	"903"	"27"	"36.000"	"29.000"	"0.0934668818979155"	"15"	"0.003317"	"0.03643"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNLGEMK"	"[R].dLNLGEmk.[S]"	"N-Term(TMT6plex); M7(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"697.39240"	"1393.77751"	"1393.77612"	"1.00"	"0.00070"	"5/76"	"5"	"76"	"350434.606384277"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"62.4909"	"20391"	"20391"	"20365"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"35.0"	""	"30.3"	""	"60.3"	"0.5"	"58.2"	"52.2"	""	"912"	"20"	"36.000"	"29.000"	"0.494270672793668"	"23"	"0.004593"	"0.05426"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQSSASSK"	"[K].qIQSSASSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"697.40564"	"1393.80400"	"1393.80511"	"-0.80"	"-0.00056"	"7/88"	"7"	"88"	"236734.68737793"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"28.6414"	"6713"	"6713"	"6691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	"1.9"	"23.8"	""	"24.1"	""	"28.4"	""	"30.0"	"30.0"	""	"805"	"26"	"36.000"	"29.000"	"0.0937056731210166"	"23"	"0.004114"	"0.04477"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQSSASSK"	"[K].qIQSSASSk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"697.40698"	"1393.80669"	"1393.80511"	"1.13"	"0.00079"	"5/88"	"5"	"88"	"218584.778503418"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"28.9041"	"6778"	"6778"	"6750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"19.2"	""	"19.4"	""	"25.5"	""	"29.8"	"40.7"	""	"785"	"19"	"35.000"	"28.000"	"0.545556407751242"	"18"	"0.004959"	"0.06213"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEVDEMK"	"[K].wEVDEMk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"697.87292"	"1394.73857"	"1394.73901"	"-0.31"	"-0.00022"	"10/54"	"10"	"54"	"408334.039428711"	"HCD"	"MS2"	"12.84834"	"41.4"	"100.000"	"89.1269"	"31170"	"31170"	"31160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.2"	""	"39.7"	""	"49.4"	""	"58.8"	""	"115.0"	"92.8"	""	"845"	"20"	"36.000"	"29.000"	"0.393393077385158"	"20"	"0.001217"	"0.009335"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEVDEMK"	"[K].wEVDEMk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"697.87305"	"1394.73882"	"1394.73901"	"-0.14"	"-0.00010"	"6/54"	"6"	"54"	"813861.654296875"	"HCD"	"MS2"	"17.51443"	"81.0"	"100.000"	"88.7739"	"31027"	"31027"	"31010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.8"	""	"76.8"	""	"77.4"	""	"116.6"	""	"218.0"	"213.7"	""	"845"	"27"	"36.000"	"29.000"	"0.0917966248069931"	"22"	"0.001261"	"0.009948"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEVDEMK"	"[K].wEVDEMk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"697.87311"	"1394.73894"	"1394.73901"	"-0.05"	"-0.00003"	"6/54"	"6"	"54"	"505683.659484863"	"HCD"	"MS2"	"9.84703"	"51.9"	"100.000"	"88.9714"	"31147"	"31147"	"31131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"43.3"	""	"62.0"	""	"68.7"	""	"131.1"	"137.4"	""	"844"	"29"	"36.000"	"29.000"	"0.0542390970496206"	"23"	"0.0003294"	"0.00616"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEVDEMK"	"[K].wEVDEMk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"697.87323"	"1394.73918"	"1394.73901"	"0.13"	"0.00009"	"6/54"	"6"	"54"	"718271.288452148"	"HCD"	"MS2"	"25.5414"	"73.8"	"100.000"	"88.6342"	"31010"	"31010"	"30991"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.5"	""	"69.9"	""	"66.8"	""	"110.1"	"0.7"	"203.9"	"186.6"	""	"821"	"28"	"36.000"	"29.000"	"0.0716659993773867"	"22"	"0.001049"	"0.00878"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"697.87640"	"1394.74553"	"1394.74771"	"-1.56"	"-0.00109"	"4/86"	"4"	"86"	"215018.156066895"	"HCD"	"MS2"	"33.6181"	"24.0"	"100.000"	"67.1732"	"22291"	"22291"	"22269"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"30.8"	""	"33.7"	""	"43.7"	""	"46.0"	"41.5"	""	"817"	"7"	"36.000"	"29.000"	"7.65935256545541"	"14"	"0.006885"	"0.08651"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"697.87646"	"1394.74565"	"1394.74771"	"-1.47"	"-0.00103"	"7/86"	"7"	"86"	"692544.892456055"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"66.4807"	"22045"	"22045"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.8"	""	"59.9"	""	"63.9"	""	"64.3"	""	"93.0"	"109.3"	""	"817"	"40"	"36.000"	"29.000"	"0.00418015187346688"	"21"	"9.9E-05"	"0.0006741"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"697.87683"	"1394.74639"	"1394.74771"	"-0.95"	"-0.00066"	"5/86"	"5"	"86"	"478951.07623291"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"64.3551"	"21147"	"21147"	"21124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.0"	""	"47.1"	""	"50.4"	""	"61.1"	"1.0"	"59.1"	"55.9"	""	"824"	"21"	"36.000"	"29.000"	"0.308245834210596"	"19"	"0.003255"	"0.03485"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"697.87683"	"1394.74639"	"1394.74771"	"-0.95"	"-0.00066"	"7/86"	"7"	"86"	"956117.326782227"	"HCD"	"MS2"	"0"	"57.0"	"100.000"	"64.6341"	"21294"	"21294"	"21275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.7"	""	"74.8"	""	"77.6"	""	"110.2"	"0.2"	"85.4"	"89.8"	""	"824"	"32"	"36.000"	"29.000"	"0.0269089787690759"	"18"	"9.9E-05"	"0.0004484"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"697.87695"	"1394.74663"	"1394.74771"	"-0.77"	"-0.00054"	"7/86"	"7"	"86"	"840434.315429688"	"HCD"	"MS2"	"4.3691"	"52.7"	"100.000"	"64.6928"	"21284"	"21284"	"21263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"74.5"	""	"75.2"	""	"90.8"	""	"79.7"	"87.6"	""	"806"	"35"	"36.000"	"29.000"	"0.0133753466393702"	"20"	"0"	"0.0003057"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"697.87720"	"1394.74712"	"1394.74771"	"-0.42"	"-0.00030"	"7/86"	"7"	"86"	"1370124.71057129"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"66.8281"	"22150"	"22150"	"22134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.7"	""	"103.5"	""	"98.4"	""	"97.4"	""	"172.0"	"210.4"	""	"809"	"40"	"36.000"	"29.000"	"0.0037404041135801"	"22"	"0"	"0.0002397"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"697.87732"	"1394.74736"	"1394.74771"	"-0.25"	"-0.00017"	"6/86"	"6"	"86"	"1155641.69219971"	"HCD"	"MS2"	"12.30328"	"75.0"	"100.000"	"66.5462"	"22037"	"22037"	"22023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.7"	""	"98.0"	""	"86.0"	""	"103.0"	""	"155.1"	"173.9"	""	"817"	"37"	"36.000"	"29.000"	"0.00857416942460209"	"20"	"0"	"0.0002173"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"697.87732"	"1394.74736"	"1394.74771"	"-0.25"	"-0.00017"	"7/86"	"7"	"86"	"1621437.03790283"	"HCD"	"MS2"	"0"	"101.0"	"100.000"	"66.7604"	"22155"	"22155"	"22141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.1"	""	"117.1"	""	"118.0"	""	"116.5"	"0.4"	"206.8"	"248.9"	""	"817"	"41"	"36.000"	"29.000"	"0.00328997093229819"	"21"	"0"	"0.0003338"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENEIQTYR"	"[R].lENEIQTYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.87750"	"1394.74773"	"1394.74771"	"0.01"	"0.00001"	"6/86"	"6"	"86"	"401398.062927246"	"HCD"	"MS2"	"38.56546"	"30.9"	"100.000"	"64.3101"	"21162"	"21162"	"21137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"39.8"	""	"44.8"	""	"57.3"	"1.9"	"50.5"	"55.2"	""	"818"	"20"	"36.000"	"29.000"	"0.395114809506834"	"14"	"0.0001991"	"0.005447"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELYQNLTR"	"[K].eELYQNLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"697.87762"	"1394.74797"	"1394.74771"	"0.19"	"0.00013"	"6/86"	"6"	"86"	"391364.172790527"	"HCD"	"MS2"	"6.518412"	"32.5"	"100.000"	"67.0637"	"22278"	"22278"	"22258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.1"	""	"41.7"	""	"38.8"	""	"48.1"	"0.1"	"60.6"	"73.6"	""	"818"	"36"	"36.000"	"29.000"	"0.011213038363185"	"23"	"0.0001991"	"0.003361"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"697.88818"	"1394.76909"	"1394.77539"	"-4.52"	"-0.00315"	"9/60"	"9"	"60"	"263743.778015137"	"HCD"	"MS2"	"43.43158"	"22.2"	"100.000"	"85.8103"	"29842"	"29842"	"29822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.6"	""	"34.9"	""	"34.1"	""	"24.1"	""	"39.2"	"44.0"	""	"827"	"19"	"36.000"	"29.000"	"0.54259465824444"	"16"	"0.001718"	"0.01499"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"697.88934"	"1394.77141"	"1394.77539"	"-2.86"	"-0.00199"	"7/60"	"7"	"60"	"450182.996398926"	"HCD"	"MS2"	"0"	"40.8"	"100.000"	"85.9135"	"29913"	"29913"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.7"	""	"69.5"	""	"60.9"	""	"44.0"	""	"73.7"	"74.6"	""	"823"	"30"	"36.000"	"29.000"	"0.0370996523124851"	"20"	"0.0009352"	"0.008377"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"697.88953"	"1394.77178"	"1394.77539"	"-2.59"	"-0.00181"	"6/60"	"6"	"60"	"323899.774475098"	"HCD"	"MS2"	"8.088992"	"30.7"	"100.000"	"86.4466"	"30095"	"30095"	"30085"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"40.9"	""	"42.8"	""	"33.2"	""	"56.4"	"57.3"	""	"850"	"26"	"36.000"	"29.000"	"0.0998593948860532"	"22"	"0.001348"	"0.01101"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"465.59601"	"1394.77347"	"1394.77539"	"-1.38"	"-0.00064"	"8/60"	"8"	"60"	"340523.744384766"	"HCD"	"MS2"	"10.16503"	"15.2"	"100.000"	"86.1371"	"30004"	"30004"	"29983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"26.2"	""	"18.3"	""	"18.7"	""	"25.4"	"34.7"	""	"855"	"16"	"36.000"	"29.000"	"1.07630688661691"	"18"	"0.0005161"	"0.00681"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"465.59613"	"1394.77384"	"1394.77539"	"-1.12"	"-0.00052"	"9/60"	"9"	"60"	"330179.019287109"	"HCD"	"MS2"	"28.40361"	"14.6"	"100.000"	"86.2415"	"30014"	"30014"	"29994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"20.3"	""	"26.3"	""	"13.3"	""	"24.7"	"28.5"	""	"856"	"28"	"36.000"	"29.000"	"0.0684610836247079"	"14"	"0.0001991"	"0.004039"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"697.89081"	"1394.77434"	"1394.77539"	"-0.76"	"-0.00053"	"7/60"	"7"	"60"	"694882.464538574"	"HCD"	"MS2"	"3.853608"	"61.6"	"100.000"	"86.2409"	"30045"	"30045"	"30030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.8"	""	"87.0"	""	"99.9"	""	"53.2"	"0.2"	"114.7"	"114.6"	""	"843"	"25"	"36.000"	"29.000"	"0.148182725682678"	"23"	"0.001049"	"0.008719"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEMGPFK"	"[R].eVEMGPFk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536; Q9R0L4"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1; Cullin-associated NEDD8-dissociated protein 2 OS=Rattus norvegicus OX=10116 GN=Cand2 PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"697.89136"	"1394.77544"	"1394.77539"	"0.03"	"0.00002"	"6/60"	"6"	"60"	"771613.850036621"	"HCD"	"MS2"	"2.016082"	"67.2"	"100.000"	"86.1032"	"29959"	"29959"	"29945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.4"	""	"116.7"	""	"91.1"	""	"62.6"	""	"121.0"	"120.1"	""	"888"	"29"	"36.000"	"29.000"	"0.0607271598564556"	"23"	"0.0001991"	"0.005193"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFEELEK"	"[R].aAFEELEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"697.90002"	"1394.79277"	"1394.79315"	"-0.27"	"-0.00019"	"6/62"	"6"	"62"	"393746.969665527"	"HCD"	"MS2"	"25.77049"	"32.1"	"100.000"	"83.3762"	"28888"	"28888"	"28864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"39.4"	""	"36.8"	""	"48.0"	""	"62.3"	"65.6"	""	"804"	"19"	"36.000"	"29.000"	"0.549826987889531"	"21"	"0.0001991"	"0.003528"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"697.90045"	"1394.79363"	"1394.79652"	"-2.08"	"-0.00145"	"7/64"	"7"	"64"	"2632947.94232178"	"HCD"	"MS2"	"8.504704"	"169.4"	"100.000"	"58.9478"	"18953"	"18953"	"18933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.7"	""	"186.1"	""	"196.6"	""	"427.2"	"1.3"	"294.5"	"302.5"	""	"799"	"22"	"36.000"	"29.000"	"0.227780626776159"	"18"	"0.003317"	"0.03696"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAFEELEK"	"[R].aAFEELEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"Q5U4E6"	"Golgin subfamily A member 4 OS=Rattus norvegicus OX=10116 GN=Golga4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"697.90070"	"1394.79411"	"1394.79315"	"0.69"	"0.00048"	"6/62"	"6"	"62"	"388282.43762207"	"HCD"	"MS2"	"41.83025"	"31.7"	"100.000"	"83.1880"	"28783"	"28783"	"28763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.3"	""	"45.2"	""	"42.2"	""	"46.9"	""	"55.1"	"65.3"	""	"802"	"16"	"36.000"	"29.000"	"1.04266398482927"	"17"	"0.0001991"	"0.003725"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QALMSELK"	"[K].qALmSELk.[I]"	"N-Term(TMT6plex); Q1(Deamidated); M4(Oxidation); K8(TMT6plex)"	"1"	"2"	"Q05030"	"Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2"	"P20786; Q05030"	"Platelet-derived growth factor receptor alpha OS=Rattus norvegicus OX=10116 GN=Pdgfra PE=1 SV=2; Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"697.90070"	"1394.79411"	"1394.79652"	"-1.73"	"-0.00120"	"6/72"	"6"	"72"	"705546.714782715"	"HCD"	"MS2"	"17.51198"	"62.6"	"100.000"	"59.6771"	"19250"	"19250"	"19232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.5"	""	"72.8"	""	"81.9"	""	"104.9"	""	"131.9"	"133.5"	""	"802"	"3"	"36.000"	"29.000"	"20.6606686477284"	"15"	"0.007681"	"0.09758"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"697.90094"	"1394.79460"	"1394.79652"	"-1.38"	"-0.00096"	"7/64"	"7"	"64"	"2226206.4901123"	"HCD"	"MS2"	"4.784997"	"145.7"	"100.000"	"58.6782"	"18879"	"18879"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.5"	""	"142.6"	""	"178.9"	""	"377.0"	"1.0"	"245.1"	"273.8"	""	"788"	"22"	"35.000"	"28.000"	"0.229877371083856"	"18"	"0.002628"	"0.0273"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"697.90131"	"1394.79534"	"1394.79652"	"-0.85"	"-0.00059"	"7/64"	"7"	"64"	"848648.079406738"	"HCD"	"MS2"	"6.705584"	"59.5"	"100.000"	"60.5960"	"19624"	"19624"	"19602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.6"	""	"69.0"	""	"75.9"	""	"148.4"	""	"95.0"	"102.6"	""	"794"	"20"	"35.000"	"28.000"	"0.387963176719457"	"17"	"0.001718"	"0.01495"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"697.90143"	"1394.79558"	"1394.79652"	"-0.68"	"-0.00047"	"12/64"	"12"	"64"	"2785383.73852539"	"HCD"	"MS2"	"31.88737"	"139.1"	"100.000"	"60.2025"	"19497"	"19497"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.4"	""	"153.7"	""	"166.5"	""	"383.9"	""	"213.2"	"237.9"	""	"794"	"20"	"35.000"	"28.000"	"0.357923741629565"	"18"	"0.003818"	"0.04187"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLMDEVVK"	"[K].sLmDEVVk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.90173"	"1394.79619"	"1394.79652"	"-0.24"	"-0.00017"	"12/64"	"12"	"64"	"2818679.6517334"	"HCD"	"MS2"	"38.51438"	"142.7"	"100.000"	"60.2967"	"19502"	"19502"	"19480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.0"	""	"151.5"	""	"175.1"	""	"385.9"	""	"229.5"	"251.4"	""	"790"	"22"	"35.000"	"28.000"	"0.253277782751139"	"14"	"0.002673"	"0.02791"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYEEIVK"	"[K].rYEEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"465.61798"	"1394.83939"	"1394.84077"	"-0.99"	"-0.00046"	"6/62"	"6"	"62"	"9065844.40460205"	"HCD"	"MS2"	"34.69915"	"419.4"	"100.000"	"42.6144"	"12320"	"12320"	"12298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"704.1"	""	"604.1"	""	"642.7"	""	"611.3"	""	"697.4"	"707.8"	""	"473"	"16"	"33.000"	"26.000"	"0.579203456696282"	"21"	"0.003357"	"0.03774"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYEEIVK"	"[K].rYEEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"697.92365"	"1394.84001"	"1394.84077"	"-0.54"	"-0.00038"	"12/62"	"12"	"62"	"2224711.0894165"	"HCD"	"MS2"	"0"	"122.2"	"100.000"	"42.7801"	"12388"	"12388"	"12362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.3"	""	"171.1"	""	"176.7"	""	"176.0"	"1.9"	"197.4"	"233.6"	""	"468"	"22"	"33.000"	"26.000"	"0.144615837632389"	"19"	"0.009751"	"0.1299"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYEEIVK"	"[K].rYEEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"465.61823"	"1394.84012"	"1394.84077"	"-0.47"	"-0.00022"	"6/62"	"6"	"62"	"6562609.53399658"	"HCD"	"MS2"	"45.83878"	"307.0"	"100.000"	"42.4348"	"12281"	"12281"	"12258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"498.3"	""	"422.6"	""	"465.2"	""	"478.0"	""	"511.6"	"528.2"	""	"468"	"13"	"33.000"	"26.000"	"1.19458169994245"	"20"	"0.001488"	"0.01201"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYEEIVK"	"[K].rYEEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"465.61880"	"1394.84186"	"1394.84077"	"0.78"	"0.00036"	"6/62"	"6"	"62"	"90964935.3955078"	"HCD"	"MS2"	"4.553812"	"466.6"	"11.015"	"42.9113"	"12442"	"12442"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"734.8"	""	"632.8"	""	"727.5"	""	"661.8"	""	"802.2"	"861.0"	""	"471"	"16"	"33.000"	"26.000"	"0.561036235033971"	"22"	"0.008758"	"0.111"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYEEIVK"	"[K].rYEEIVk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"465.61920"	"1394.84305"	"1394.84077"	"1.63"	"0.00076"	"6/62"	"6"	"62"	"104541013.404785"	"HCD"	"MS2"	"4.009549"	"521.0"	"11.320"	"42.7226"	"12399"	"12399"	"12383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"830.3"	""	"712.7"	""	"789.8"	""	"734.5"	""	"910.9"	"958.1"	""	"472"	"16"	"33.000"	"26.000"	"0.553238000415501"	"26"	"0.009674"	"0.1285"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDNFFPER"	"[R].eIDNFFPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"Q5XIS1"	"Protein phosphatase Slingshot homolog 3 OS=Rattus norvegicus OX=10116 GN=Ssh3 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"698.35626"	"1395.70525"	"1395.71060"	"-3.83"	"-0.00267"	"6/88"	"6"	"88"	"562082.563842773"	"HCD"	"MS2"	"47.80576"	"36.5"	"100.000"	"98.5710"	"35015"	"35015"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"48.7"	""	"56.3"	""	"51.0"	"0.1"	"68.9"	"65.6"	""	"701"	"20"	"35.000"	"28.000"	"0.385201546721099"	"18"	"0.001615"	"0.01391"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVWDYVTVR"	"[K].eVWDYVTVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"698.37842"	"1395.74956"	"1395.74698"	"1.85"	"0.00129"	"5/76"	"5"	"76"	"147873.621582031"	"HCD"	"MS2"	"36.49694"	"11.2"	"100.000"	"103.6783"	"37051"	"37051"	"37026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"12.6"	""	"15.9"	""	"14.5"	""	"15.6"	"31.3"	""	"789"	"10"	"35.000"	"28.000"	"4.34557257614088"	"19"	"0.00329"	"0.03552"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTWDPAQPPR"	"[K].vTWDPAQPPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.38159"	"1395.75591"	"1395.75822"	"-1.65"	"-0.00115"	"9/82"	"9"	"82"	"614362.722290039"	"HCD"	"MS2"	"25.15457"	"42.3"	"100.000"	"70.6949"	"23754"	"23754"	"23730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	""	"57.8"	""	"51.9"	""	"68.5"	"0.7"	"82.6"	"79.1"	""	"833"	"14"	"36.000"	"29.000"	"1.56536278886137"	"13"	"0.002328"	"0.02224"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTWDPAQPPR"	"[K].vTWDPAQPPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.38220"	"1395.75713"	"1395.75822"	"-0.78"	"-0.00054"	"7/82"	"7"	"82"	"805454.029418945"	"HCD"	"MS2"	"47.90016"	"58.2"	"100.000"	"70.9373"	"23819"	"23819"	"23794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.1"	""	"79.0"	""	"81.1"	""	"78.3"	""	"118.3"	"119.0"	""	"820"	"14"	"36.000"	"29.000"	"1.71705361698347"	"13"	"0.005426"	"0.0692"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTWDPAQPPR"	"[K].vTWDPAQPPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"Q64680"	"Cytochrome P450 2D4 OS=Rattus norvegicus OX=10116 GN=Cyp2d4 PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"698.38287"	"1395.75847"	"1395.75822"	"0.18"	"0.00013"	"4/82"	"4"	"82"	"467575.994812012"	"HCD"	"MS2"	"13.08989"	"35.9"	"100.000"	"70.5987"	"23682"	"23682"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.0"	""	"44.1"	""	"48.3"	""	"54.9"	"0.6"	"68.8"	"78.2"	""	"835"	"18"	"36.000"	"29.000"	"0.626118418822242"	"15"	"0.00329"	"0.03541"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEIFAQSK"	"[R].dEIFAQSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"3"	"698.39630"	"1395.78533"	"1395.78840"	"-2.20"	"-0.00154"	"5/72"	"5"	"72"	"283054.127075195"	"HCD"	"MS2"	"14.48574"	"32.5"	"100.000"	"65.4472"	"21592"	"21592"	"21567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"36.2"	""	"36.3"	""	"54.3"	"2.1"	"62.1"	"75.7"	""	"749"	"5"	"35.000"	"28.000"	"12.9554296995883"	"17"	"0.006885"	"0.0867"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAYEEGGK"	"[R].iAAYEEGGk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"698.39764"	"1395.78801"	"1395.78840"	"-0.28"	"-0.00020"	"14/66"	"14"	"66"	"338686.952026367"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"54.1162"	"17027"	"17027"	"16999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"37.1"	""	"39.6"	""	"46.9"	"1.5"	"48.7"	"51.4"	""	"756"	"25"	"35.000"	"28.000"	"0.126035184024503"	"24"	"9.9E-05"	"0.0004834"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLALGGSHLR"	"[R].aDGLALGGSHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI28"	"Ribonucleoprotein PTB-binding 1 OS=Rattus norvegicus OX=10116 GN=Raver1 PE=1 SV=1"	"Q5XI28"	"Ribonucleoprotein PTB-binding 1 OS=Rattus norvegicus OX=10116 GN=Raver1 PE=1 SV=1"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"465.93475"	"1395.78971"	"1395.79058"	"-0.62"	"-0.00029"	"12/102"	"12"	"102"	"3350291.05334473"	"HCD"	"MS2"	"23.20536"	"67.3"	"100.000"	"47.6966"	"14382"	"14382"	"14361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.2"	"2.2"	"94.9"	""	"89.8"	""	"105.8"	"1.2"	"124.9"	"129.5"	""	"743"	"43"	"35.000"	"28.000"	"0.00171379478949181"	"26"	"0"	"4.756E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGLALGGSHLR"	"[R].aDGLALGGSHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI28"	"Ribonucleoprotein PTB-binding 1 OS=Rattus norvegicus OX=10116 GN=Raver1 PE=1 SV=1"	"Q5XI28"	"Ribonucleoprotein PTB-binding 1 OS=Rattus norvegicus OX=10116 GN=Raver1 PE=1 SV=1"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"465.93503"	"1395.79053"	"1395.79058"	"-0.03"	"-0.00002"	"12/102"	"12"	"102"	"3296079.13458252"	"HCD"	"MS2"	"13.06588"	"73.2"	"100.000"	"47.3884"	"14294"	"14294"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.6"	""	"90.2"	""	"97.6"	""	"122.0"	"2.7"	"139.5"	"145.4"	""	"751"	"39"	"35.000"	"28.000"	"0.00467315236720155"	"23"	"0"	"8.198E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAAYEEGGK"	"[R].iAAYEEGGk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"698.39966"	"1395.79204"	"1395.78840"	"2.61"	"0.00182"	"7/66"	"7"	"66"	"273329.808776855"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"54.3669"	"17096"	"17096"	"17069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.5"	""	"28.1"	""	"28.5"	""	"33.6"	"2.0"	"39.9"	"40.7"	""	"738"	"15"	"35.000"	"28.000"	"1.28240843572543"	"20"	"0.00192"	"0.01592"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"698.41504"	"1395.82280"	"1395.82479"	"-1.42"	"-0.00099"	"12/72"	"12"	"72"	"475681.56842041"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"57.9185"	"18569"	"18569"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.7"	""	"57.2"	""	"71.3"	""	"77.7"	"0.9"	"76.8"	"83.6"	""	"511"	"34"	"34.000"	"27.000"	"0.0101482440889442"	"24"	"0.0001991"	"0.002013"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"698.41547"	"1395.82366"	"1395.82479"	"-0.81"	"-0.00057"	"7/72"	"7"	"72"	"871797.757080078"	"HCD"	"MS2"	"0"	"79.9"	"100.000"	"58.2686"	"18676"	"18676"	"18658"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.8"	""	"100.1"	""	"115.0"	""	"124.7"	"0.1"	"129.0"	"155.1"	""	"503"	"42"	"34.000"	"27.000"	"0.00170819713603222"	"25"	"9.9E-05"	"0.0006268"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"698.41571"	"1395.82414"	"1395.82479"	"-0.46"	"-0.00032"	"7/72"	"7"	"72"	"1664478.40344238"	"HCD"	"MS2"	"15.87781"	"134.0"	"100.000"	"58.5218"	"18815"	"18815"	"18795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"187.3"	""	"157.2"	""	"193.8"	""	"228.3"	""	"220.5"	"287.7"	""	"503"	"29"	"34.000"	"27.000"	"0.0329259253634351"	"17"	"0.0001991"	"0.002185"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"698.41583"	"1395.82439"	"1395.82479"	"-0.29"	"-0.00020"	"7/72"	"7"	"72"	"3281299.29998779"	"HCD"	"MS2"	"0"	"256.8"	"100.000"	"58.1993"	"18684"	"18684"	"18669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"423.7"	""	"317.2"	""	"362.5"	""	"397.5"	"1.1"	"394.7"	"533.0"	""	"524"	"44"	"34.000"	"27.000"	"0.00112279712344129"	"25"	"9.9E-05"	"0.0006512"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQGEVYK"	"[R].lTQGEVYk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"698.41602"	"1395.82475"	"1395.82479"	"-0.02"	"-0.00002"	"7/72"	"7"	"72"	"3765821.86938477"	"HCD"	"MS2"	"0"	"295.6"	"100.000"	"58.5748"	"18801"	"18801"	"18782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"473.8"	""	"348.8"	""	"424.9"	""	"464.2"	""	"461.4"	"630.2"	""	"523"	"44"	"34.000"	"27.000"	"0.00112323775599018"	"25"	"0.0001686"	"0.001668"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGSGSQVDSAR"	"[R].fGGSGSQVDSAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"698.85406"	"1396.70085"	"1396.70182"	"-0.69"	"-0.00048"	"10/110"	"10"	"110"	"693964.723999023"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"34.5249"	"9045"	"9045"	"9023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.8"	""	"54.6"	""	"59.8"	""	"59.2"	"1.4"	"79.8"	"78.7"	""	"653"	"72"	"35.000"	"28.000"	"1.97643795607152E-06"	"23"	"0"	"2.791E-08"	"1.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGGSGSQVDSAR"	"[R].fGGSGSQVDSAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"698.85431"	"1396.70134"	"1396.70182"	"-0.34"	"-0.00024"	"10/110"	"10"	"110"	"784102.416503906"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"34.4284"	"9042"	"9042"	"9016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.7"	""	"46.5"	""	"61.5"	""	"70.0"	"0.6"	"89.2"	"83.3"	""	"664"	"71"	"35.000"	"28.000"	"2.85849925725287E-06"	"23"	"0"	"7.049E-08"	"1.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"698.88007"	"1396.75286"	"1396.75466"	"-1.29"	"-0.00090"	"5/64"	"5"	"64"	"380385.737915039"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"63.1933"	"20677"	"20677"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"52.1"	""	"51.0"	""	"38.4"	""	"72.9"	"69.4"	""	"758"	"30"	"35.000"	"28.000"	"0.0402382616178317"	"24"	"0.001488"	"0.0124"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"698.88049"	"1396.75371"	"1396.75466"	"-0.68"	"-0.00047"	"7/64"	"7"	"64"	"986694.804870605"	"HCD"	"MS2"	"0"	"90.0"	"100.000"	"62.5578"	"20418"	"20418"	"20395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.3"	""	"135.3"	""	"120.9"	""	"103.1"	"0.3"	"174.5"	"164.4"	""	"747"	"44"	"35.000"	"28.000"	"0.00160431855396686"	""	"0"	"0.0002664"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"698.88049"	"1396.75371"	"1396.75466"	"-0.68"	"-0.00047"	"5/64"	"5"	"64"	"960139.550354004"	"HCD"	"MS2"	"19.98323"	"84.5"	"100.000"	"62.5124"	"20433"	"20433"	"20408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.5"	""	"122.3"	""	"104.5"	""	"101.2"	""	"160.0"	"169.4"	""	"747"	"30"	"35.000"	"28.000"	"0.0336736819895825"	"25"	"9.9E-05"	"0.0008785"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"698.88062"	"1396.75395"	"1396.75466"	"-0.50"	"-0.00035"	"7/64"	"7"	"64"	"3692257.87353516"	"HCD"	"MS2"	"0"	"293.6"	"100.000"	"62.7980"	"20549"	"20549"	"20536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"502.3"	""	"397.6"	""	"399.1"	""	"274.1"	"1.1"	"570.2"	"639.5"	""	"746"	"41"	"35.000"	"28.000"	"0.00325618320408765"	""	"0.0001686"	"0.001607"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.4333"	"0.0000"	"1"	"1"	"1"	"698.88086"	"1396.75444"	"1396.75466"	"-0.16"	"-0.00011"	"5/64"	"5"	"64"	"478310.926635742"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"63.1205"	"20679"	"20679"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.1"	""	"54.4"	""	"55.7"	""	"50.9"	"0.8"	"87.0"	"96.0"	""	"768"	"30"	"35.000"	"28.000"	"0.0352639717049695"	""	"0.0001991"	"0.003416"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEMPVDk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"698.88098"	"1396.75469"	"1396.75466"	"0.02"	"0.00001"	"7/64"	"7"	"64"	"3673972.3168335"	"HCD"	"MS2"	"0"	"284.3"	"100.000"	"62.8778"	"20548"	"20548"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"479.6"	""	"407.0"	""	"383.5"	""	"275.3"	""	"531.8"	"618.0"	""	"768"	"43"	"35.000"	"28.000"	"0.0020908901869149"	"28"	"9.9E-05"	"0.0008085"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDAEYTK"	"[K].lVDAEYTk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"698.90741"	"1396.80754"	"1396.80880"	"-0.90"	"-0.00063"	"7/64"	"7"	"64"	"438542.834655762"	"HCD"	"MS2"	"20.87186"	"43.0"	"100.000"	"69.0645"	"23058"	"23058"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.7"	""	"48.0"	""	"55.7"	""	"73.5"	"1.4"	"86.9"	"79.8"	""	"559"	"44"	"34.000"	"27.000"	"0.00111784557558227"	"16"	"0"	"0.0002179"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIDSYIK"	"[K].eAIDSYIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"698.90778"	"1396.80828"	"1396.80880"	"-0.38"	"-0.00026"	"14/64"	"14"	"64"	"5316346.22296143"	"HCD"	"MS2"	"0"	"423.2"	"100.000"	"81.4494"	"28110"	"28110"	"28093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"617.1"	"3.0"	"490.5"	""	"497.8"	""	"730.8"	""	"822.7"	"852.5"	""	"577"	"48"	"34.000"	"27.000"	"0.000465742443644441"	"27"	"0.0001686"	"0.001116"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIDSYIK"	"[K].eAIDSYIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"698.90784"	"1396.80840"	"1396.80880"	"-0.29"	"-0.00020"	"7/64"	"7"	"64"	"637566.792175293"	"HCD"	"MS2"	"0"	"58.5"	"100.000"	"81.1403"	"27984"	"27984"	"27967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.1"	""	"78.0"	""	"73.4"	""	"97.5"	"0.3"	"111.2"	"112.3"	""	"575"	"41"	"34.000"	"27.000"	"0.00234767431765595"	"24"	"0"	"0.0002594"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIDSYIK"	"[K].eAIDSYIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"698.90790"	"1396.80852"	"1396.80880"	"-0.20"	"-0.00014"	"14/64"	"14"	"64"	"2300007.34729004"	"HCD"	"MS2"	"0.6599977"	"204.1"	"100.000"	"81.7147"	"28189"	"28189"	"28171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"279.2"	""	"248.4"	""	"248.4"	""	"321.8"	""	"411.0"	"432.7"	""	"573"	"44"	"34.000"	"27.000"	"0.00117794395096446"	"24"	"9.9E-05"	"0.0004204"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIDSYIK"	"[K].eAIDSYIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"698.90796"	"1396.80864"	"1396.80880"	"-0.12"	"-0.00008"	"14/64"	"14"	"64"	"1520182.88342285"	"HCD"	"MS2"	"0"	"121.8"	"100.000"	"81.1385"	"27956"	"27956"	"27939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"189.3"	""	"145.0"	""	"147.5"	""	"212.4"	""	"227.3"	"236.1"	""	"573"	"46"	"34.000"	"27.000"	"0.000790905555807129"	"25"	"9.9E-05"	"0.0005304"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIDSYIK"	"[K].eAIDSYIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"698.90802"	"1396.80876"	"1396.80880"	"-0.03"	"-0.00002"	"14/64"	"14"	"64"	"2900691.88842773"	"HCD"	"MS2"	"1.853911"	"245.8"	"100.000"	"81.7514"	"28233"	"28233"	"28216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"344.0"	""	"282.9"	""	"296.6"	""	"388.8"	""	"494.0"	"528.3"	""	"572"	"46"	"34.000"	"27.000"	"0.000787709409154715"	"25"	"0.0001686"	"0.001073"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIDSYIK"	"[K].eAIDSYIk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"698.90808"	"1396.80889"	"1396.80880"	"0.06"	"0.00004"	"14/64"	"14"	"64"	"5524226.03607178"	"HCD"	"MS2"	"0.2426643"	"454.2"	"100.000"	"81.4083"	"28066"	"28066"	"28058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"626.7"	""	"544.9"	""	"523.8"	""	"768.7"	"1.1"	"886.9"	"958.7"	""	"572"	"48"	"34.000"	"27.000"	"0.00046597866533496"	"27"	"9.9E-05"	"0.0006098"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDAEYTK"	"[K].lVDAEYTk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"698.90887"	"1396.81047"	"1396.80880"	"1.20"	"0.00083"	"12/64"	"12"	"64"	"478657.795043945"	"HCD"	"MS2"	"13.5961"	"46.6"	"100.000"	"69.1144"	"23112"	"23112"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.0"	""	"63.6"	""	"63.6"	""	"71.7"	"0.8"	"84.8"	"90.4"	""	"560"	"37"	"34.000"	"27.000"	"0.00578306443626947"	"16"	"9.9E-05"	"0.0004179"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSETAQQAMR"	"[R].fSETAQQAMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7A9"	"Lysosomal alpha-glucosidase OS=Rattus norvegicus OX=10116 GN=Gaa PE=2 SV=1"	"Q6P7A9"	"Lysosomal alpha-glucosidase OS=Rattus norvegicus OX=10116 GN=Gaa PE=2 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"699.35590"	"1397.70452"	"1397.70446"	"0.04"	"0.00003"	"5/84"	"5"	"84"	"365132.727478027"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"49.2065"	"14997"	"14997"	"14968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.5"	""	"44.0"	""	"48.0"	""	"49.9"	""	"56.4"	"56.6"	""	"655"	"22"	"35.000"	"28.000"	"0.198706147940236"	"24"	"0.002035"	"0.01785"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNK"	"[K].lYEEGSNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"699.38666"	"1397.76604"	"1397.76767"	"-1.16"	"-0.00081"	"7/64"	"7"	"64"	"1187046.2277832"	"HCD"	"MS2"	"32.0727"	"105.6"	"100.000"	"43.9384"	"12860"	"12860"	"12835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.9"	""	"100.0"	""	"114.1"	""	"199.5"	""	"229.1"	"237.7"	""	"678"	"26"	"35.000"	"28.000"	"0.0935835893258697"	"17"	"0.0001991"	"0.002103"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNK"	"[K].lYEEGSNk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"699.38678"	"1397.76628"	"1397.76767"	"-0.99"	"-0.00069"	"5/64"	"5"	"64"	"1071942.93847656"	"HCD"	"MS2"	"8.765709"	"99.0"	"100.000"	"43.8264"	"12850"	"12850"	"12826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.2"	""	"97.5"	""	"102.1"	""	"191.8"	""	"212.0"	"225.6"	""	"671"	"23"	"35.000"	"28.000"	"0.175263921409205"	"20"	"0.0001991"	"0.003236"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSFDELSK"	"[K].nSFDELSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"699.38770"	"1397.76811"	"1397.76767"	"0.32"	"0.00022"	"11/80"	"11"	"80"	"754528.068847656"	"HCD"	"MS2"	"32.62417"	"76.2"	"100.000"	"66.0219"	"21860"	"21860"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.7"	""	"107.1"	""	"105.9"	""	"110.0"	""	"150.1"	"143.5"	""	"707"	"26"	"35.000"	"28.000"	"0.0908634909208794"	"16"	"0.0001686"	"0.001398"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"699.41058"	"1397.81389"	"1397.81529"	"-1.00"	"-0.00070"	"14/68"	"14"	"68"	"1320566.01416016"	"HCD"	"MS2"	"0"	"109.2"	"100.000"	"38.5601"	"10715"	"10715"	"10692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.4"	""	"86.2"	""	"85.7"	""	"213.8"	""	"285.6"	"286.7"	""	"540"	"47"	"34.000"	"27.000"	"0.000501607202874758"	""	"9.9E-05"	"0.0006639"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.3824"	"0.0000"	"1"	"1"	"1"	"466.60956"	"1397.81412"	"1397.81529"	"-0.83"	"-0.00039"	"10/68"	"10"	"68"	"99126576.4228516"	"HCD"	"MS2"	"30.34475"	"468.4"	"13.362"	"38.5809"	"10724"	"10724"	"10708"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"359.1"	""	"380.6"	""	"351.6"	""	"956.3"	""	"1161.7"	"1266.8"	""	"539"	"34"	"34.000"	"27.000"	"0.0103171268323884"	""	"0.0001991"	"0.003518"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6383"	"0.0000"	"1"	"1"	"1"	"699.41119"	"1397.81511"	"1397.81529"	"-0.12"	"-0.00009"	"14/68"	"14"	"68"	"1216608.51800537"	"HCD"	"MS2"	"0"	"101.4"	"100.000"	"38.6452"	"10714"	"10714"	"10686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.8"	""	"74.4"	""	"70.3"	""	"208.2"	""	"269.3"	"266.1"	""	"547"	"47"	"34.000"	"27.000"	"0.000535744018203889"	""	"9.9E-05"	"0.0005469"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLNDDVVK"	"[K].hLNDDVVk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.3793"	"0.0000"	"1"	"1"	"1"	"466.61002"	"1397.81549"	"1397.81529"	"0.15"	"0.00007"	"11/68"	"11"	"68"	"128802319.254395"	"HCD"	"MS2"	"21.83209"	"534.8"	"12.324"	"38.6960"	"10735"	"10735"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"408.8"	""	"438.9"	""	"396.9"	""	"1069.8"	""	"1322.8"	"1483.2"	""	"546"	"29"	"34.000"	"27.000"	"0.0315618642118443"	""	"0.0001991"	"0.003227"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTLEPQLALR"	"[R].qTLEPQLALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P80203"	"Serine/threonine-protein kinase receptor R3 OS=Rattus norvegicus OX=10116 GN=Acvrl1 PE=1 SV=2"	"P80203"	"Serine/threonine-protein kinase receptor R3 OS=Rattus norvegicus OX=10116 GN=Acvrl1 PE=1 SV=2"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"699.41907"	"1397.83086"	"1397.83138"	"-0.37"	"-0.00026"	"7/94"	"7"	"94"	"843872.135009766"	"HCD"	"MS2"	"71.8624"	"40.5"	"100.000"	"78.3446"	"26847"	"26847"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.4"	""	"40.7"	""	"40.6"	""	"80.0"	""	"89.1"	"85.9"	""	"466"	"24"	"33.000"	"26.000"	"0.099393027880771"	"24"	"0.0005161"	"0.007018"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTLEPQLALR"	"[R].qTLEPQLALR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P80203"	"Serine/threonine-protein kinase receptor R3 OS=Rattus norvegicus OX=10116 GN=Acvrl1 PE=1 SV=2"	"P80203"	"Serine/threonine-protein kinase receptor R3 OS=Rattus norvegicus OX=10116 GN=Acvrl1 PE=1 SV=2"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"699.41986"	"1397.83245"	"1397.83138"	"0.76"	"0.00053"	"3/94"	"3"	"94"	"373298.009094238"	"HCD"	"MS2"	"55.07026"	"26.4"	"100.000"	"78.2226"	"26771"	"26771"	"26742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.6"	""	"21.2"	""	"30.1"	""	"63.1"	""	"51.2"	"55.4"	""	"446"	"6"	"33.000"	"26.000"	"5.89257152882794"	"18"	"0.006157"	"0.07498"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQNHNNK"	"[R].sVQNHNNk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"466.93323"	"1398.78513"	"1398.78538"	"-0.18"	"-0.00008"	"7/66"	"7"	"66"	"1682675.46759033"	"HCD"	"MS2"	"18.35247"	"125.3"	"100.000"	"18.9583"	"2888"	"2888"	"2859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.2"	""	"137.9"	""	"161.9"	""	"218.0"	"14.0"	"235.2"	"243.8"	""	"666"	"15"	"35.000"	"28.000"	"1.17069626695923"	"19"	"0.00455"	"0.05304"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"466.93353"	"1398.78604"	"1398.77398"	"8.63"	"0.00402"	"6/112"	"6"	"112"	"1316970.27026367"	"HCD"	"MS2"	"18.57106"	"60.4"	"100.000"	"72.9231"	"24623"	"24623"	"24602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.1"	""	"77.4"	""	"78.5"	""	"104.3"	"1.3"	"116.3"	"114.2"	"NoQuanLabels"	"644"	"17"	"35.000"	"28.000"	"0.712616496493015"	"25"	"0.008893"	"0.1139"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQNHNNK"	"[R].sVQNHNNk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"466.93353"	"1398.78604"	"1398.78538"	"0.47"	"0.00022"	"7/66"	"7"	"66"	"2050985.57617188"	"HCD"	"MS2"	"13.64504"	"142.4"	"100.000"	"18.8742"	"2893"	"2893"	"2872"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.9"	""	"167.2"	""	"175.9"	""	"240.3"	""	"283.6"	"283.0"	""	"644"	"17"	"35.000"	"28.000"	"0.632202009141207"	"21"	"0.00296"	"0.03155"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSELTSEK"	"[R].fSELTSEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"699.89691"	"1398.78655"	"1398.78807"	"-1.09"	"-0.00076"	"12/66"	"12"	"66"	"705250.061950684"	"HCD"	"MS2"	"34.3931"	"63.4"	"100.000"	"74.5073"	"25298"	"25298"	"25277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"77.1"	""	"71.9"	""	"121.2"	"0.6"	"129.9"	"119.6"	""	"643"	"31"	"35.000"	"28.000"	"0.0228655144639545"	""	"0.0001991"	"0.003557"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSELTSEK"	"[R].fSELTSEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"699.89691"	"1398.78655"	"1398.78807"	"-1.09"	"-0.00076"	"7/66"	"7"	"66"	"698264.433288574"	"HCD"	"MS2"	"39.68201"	"64.4"	"100.000"	"74.3795"	"25216"	"25216"	"25199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.4"	""	"70.1"	""	"70.2"	""	"123.0"	"1.7"	"133.9"	"128.6"	""	"643"	"42"	"35.000"	"28.000"	"0.00218867348820038"	""	"0"	"0.0002955"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSELTSEK"	"[R].fSELTSEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"699.89691"	"1398.78655"	"1398.78807"	"-1.09"	"-0.00076"	"14/66"	"14"	"66"	"1010471.15985107"	"HCD"	"MS2"	"7.528192"	"92.3"	"100.000"	"74.8094"	"25420"	"25420"	"25404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.5"	""	"106.5"	""	"113.3"	""	"159.0"	""	"186.0"	"182.4"	""	"643"	"44"	"35.000"	"28.000"	"0.00135887959486391"	""	"9.9E-05"	"0.0006513"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"699.89722"	"1398.78716"	"1398.78807"	"-0.65"	"-0.00046"	"14/66"	"14"	"66"	"1134739.21893311"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"88.5917"	"30953"	"30953"	"30940"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.3"	""	"137.3"	""	"157.3"	""	"148.4"	"1.9"	"191.9"	"181.6"	""	"636"	"50"	"35.000"	"28.000"	"0.000326909182804219"	""	"0"	"0.0003992"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"699.89722"	"1398.78716"	"1398.78807"	"-0.65"	"-0.00046"	"7/66"	"7"	"66"	"4175574.44036865"	"HCD"	"MS2"	"0"	"343.0"	"100.000"	"88.3131"	"30841"	"30841"	"30828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"569.7"	""	"464.0"	""	"514.7"	""	"553.4"	""	"568.8"	"577.4"	""	"636"	"45"	"35.000"	"28.000"	"0.0010676456132926"	"26"	"0.0001686"	"0.001333"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGPLSPSIQSR"	"[K].gAGPLSPSIQSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.89728"	"1398.78728"	"1398.79024"	"-2.12"	"-0.00148"	"10/102"	"10"	"102"	"451831.728393555"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"47.0255"	"14109"	"14109"	"14086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"42.7"	""	"42.8"	""	"50.8"	"1.0"	"60.5"	"63.3"	""	"636"	"45"	"35.000"	"28.000"	"0.000989525795199714"	"15"	"0"	"0.0001335"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSELTSEK"	"[R].fSELTSEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"699.89740"	"1398.78752"	"1398.78807"	"-0.39"	"-0.00027"	"7/66"	"7"	"66"	"1083405.68164063"	"HCD"	"MS2"	"10.2056"	"98.5"	"100.000"	"74.6585"	"25328"	"25328"	"25314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.3"	""	"109.5"	""	"122.6"	""	"183.6"	""	"195.4"	"189.0"	""	"671"	"45"	"35.000"	"28.000"	"0.0011579572454718"	""	"9.9E-05"	"0.0009653"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETDLSFK"	"[R].tETDLSFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUD9"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"Q9WUD9"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"2"	"2"	"0.0652"	"0.0000"	"1"	"1"	"1"	"699.89752"	"1398.78777"	"1398.78807"	"-0.21"	"-0.00015"	"14/66"	"14"	"66"	"953073.91986084"	"HCD"	"MS2"	"5.197585"	"89.6"	"100.000"	"72.4267"	"24421"	"24421"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.6"	""	"114.5"	""	"119.2"	""	"142.6"	""	"155.6"	"182.4"	""	"668"	"46"	"35.000"	"28.000"	"0.000756391198736082"	""	"0"	"0.0001956"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"699.89752"	"1398.78777"	"1398.78807"	"-0.21"	"-0.00015"	"7/66"	"7"	"66"	"885134.700500488"	"HCD"	"MS2"	"0"	"80.7"	"100.000"	"88.0042"	"30717"	"30717"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.8"	""	"124.6"	""	"123.3"	""	"128.7"	"0.6"	"122.8"	"121.5"	""	"668"	"45"	"35.000"	"28.000"	"0.00117151125900158"	"22"	"0"	"0.0003473"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"699.89758"	"1398.78789"	"1398.78807"	"-0.13"	"-0.00009"	"7/66"	"7"	"66"	"903117.33770752"	"HCD"	"MS2"	"0"	"85.4"	"100.000"	"87.9086"	"30716"	"30716"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.5"	""	"126.7"	""	"125.8"	""	"134.5"	""	"132.6"	"133.0"	""	"668"	"43"	"35.000"	"28.000"	"0.00174079033509097"	"23"	"9.9E-05"	"0.0004183"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TETDLSFK"	"[R].tETDLSFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WUD9"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"Q9WUD9"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4"	"0"	"2"	"2"	"0.0652"	"0.0000"	"1"	"1"	"1"	"699.89764"	"1398.78801"	"1398.78807"	"-0.04"	"-0.00003"	"7/66"	"7"	"66"	"1025898.71783447"	"HCD"	"MS2"	"0"	"102.5"	"100.000"	"72.5049"	"24482"	"24482"	"24462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.5"	""	"127.7"	""	"128.9"	""	"161.9"	""	"203.5"	"203.2"	""	"669"	"46"	"35.000"	"28.000"	"0.000925541980390151"	"20"	"9.9E-05"	"0.0004188"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"699.89771"	"1398.78813"	"1398.78807"	"0.05"	"0.00003"	"7/66"	"7"	"66"	"1636791.50634766"	"HCD"	"MS2"	"1.158952"	"143.3"	"100.000"	"88.4523"	"30937"	"30937"	"30928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.7"	""	"186.3"	""	"213.0"	""	"211.8"	""	"252.4"	"272.5"	""	"669"	"43"	"35.000"	"28.000"	"0.00151494240477761"	"25"	"0"	"0.0003491"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISLSDYK"	"[K].dISLSDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"699.89777"	"1398.78826"	"1398.78807"	"0.13"	"0.00009"	"7/66"	"7"	"66"	"4297754.87615967"	"HCD"	"MS2"	"0"	"362.0"	"100.000"	"88.1921"	"30832"	"30832"	"30815"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"601.9"	""	"482.3"	""	"561.4"	""	"551.7"	"0.8"	"601.7"	"623.8"	""	"671"	"45"	"35.000"	"28.000"	"0.00113420752547107"	"26"	"0.0001686"	"0.001672"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGPLSPSIQSR"	"[K].gAGPLSPSIQSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.89819"	"1398.78911"	"1398.79024"	"-0.81"	"-0.00057"	"7/102"	"7"	"102"	"436250.914550781"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"46.6390"	"13990"	"13990"	"13961"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.4"	""	"38.1"	""	"38.7"	""	"51.2"	""	"64.7"	"68.3"	""	"686"	"39"	"35.000"	"28.000"	"0.00393816692173431"	"15"	"9.9E-05"	"0.0006749"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"699.89862"	"1398.78996"	"1398.77398"	"11.43"	"0.00799"	"9/112"	"9"	"112"	"1176705.06030273"	"HCD"	"MS2"	"4.55177"	"86.4"	"100.000"	"72.2043"	"24361"	"24361"	"24342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.8"	""	"111.7"	""	"115.1"	""	"142.1"	"1.8"	"158.0"	"171.5"	"NoQuanLabels"	"681"	"24"	"35.000"	"28.000"	"0.124485026544269"	""	"0.009239"	"0.1185"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTEDLSFK"	"[R].tTEDLSFk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"F1LM93"	"Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.0769"	"0.0000"	"1"	"1"	"1"	"699.89862"	"1398.78996"	"1398.78807"	"1.36"	"0.00095"	"6/66"	"6"	"66"	"1095118.66021729"	"HCD"	"MS2"	"3.105788"	"86.3"	"100.000"	"72.1109"	"24293"	"24293"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.7"	""	"106.0"	""	"114.7"	""	"126.1"	""	"163.9"	"185.0"	""	"681"	"26"	"35.000"	"28.000"	"0.0774670675177891"	""	"0.0001991"	"0.003197"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"699.89911"	"1398.79094"	"1398.77398"	"12.13"	"0.00848"	"8/112"	"8"	"112"	"2446226.17327881"	"HCD"	"MS2"	"0"	"148.4"	"100.000"	"71.8192"	"24178"	"24178"	"24161"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.6"	""	"206.3"	""	"193.4"	""	"229.1"	""	"288.3"	"291.8"	"NoQuanLabels"	"671"	"27"	"35.000"	"28.000"	"0.074078558792784"	""	"0.004357"	"0.05123"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0577"	"0.0000"	"1"	"1"	"1"	"466.93564"	"1398.79236"	"1398.77398"	"13.14"	"0.00613"	"11/112"	"11"	"112"	"1867879.03692627"	"HCD"	"MS2"	"11.19697"	"40.6"	"100.000"	"72.5378"	"24466"	"24466"	"24448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.5"	""	"48.6"	""	"56.9"	""	"74.8"	"0.7"	"79.9"	"75.4"	"NoQuanLabels"	"691"	"52"	"35.000"	"28.000"	"0.000203914473199372"	""	"0.002508"	"0.02354"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.1957"	"0.0000"	"1"	"1"	"1"	"466.93579"	"1398.79282"	"1398.77398"	"13.47"	"0.00628"	"11/112"	"11"	"112"	"1731141.88696289"	"HCD"	"MS2"	"12.70062"	"38.6"	"100.000"	"72.6452"	"24539"	"24539"	"24526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.3"	""	"52.6"	""	"49.9"	""	"68.0"	"0.6"	"79.1"	"71.3"	"NoQuanLabels"	"691"	"46"	"35.000"	"28.000"	"0.000848101930369178"	""	"0.0005161"	"0.006722"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0484"	"0.0000"	"1"	"1"	"1"	"466.93591"	"1398.79319"	"1398.77398"	"13.73"	"0.00640"	"8/112"	"8"	"112"	"10504745.3886719"	"HCD"	"MS2"	"3.139955"	"60.1"	"78.613"	"72.2174"	"24337"	"24337"	"24320"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.1"	""	"77.3"	""	"82.4"	""	"95.7"	""	"119.9"	"125.2"	"NoQuanLabels"	"675"	"62"	"35.000"	"28.000"	"2.1891412132253E-05"	""	"0.006925"	"0.0868"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0484"	"2"	"2"	"2"	"466.93591"	"1398.79319"	"1398.79427"	"-0.77"	"-0.00036"	"8/66"	"8"	"66"	"10504745.3886719"	"HCD"	"MS2"	"3.139955"	"60.1"	"78.613"	"72.2174"	"24337"	"24337"	"24320"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.1"	""	"77.3"	""	"82.4"	""	"95.7"	""	"119.9"	"125.2"	""	"675"	"59"	"35.000"	"28.000"	"4.16172881214756E-05"	""	"0.0001686"	"0.001902"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0469"	"0.0000"	"1"	"1"	"1"	"466.93600"	"1398.79346"	"1398.77398"	"13.93"	"0.00650"	"8/112"	"8"	"112"	"9544605.3258667"	"HCD"	"MS2"	"3.769294"	"59.0"	"83.027"	"72.3462"	"24419"	"24419"	"24402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.0"	""	"79.0"	""	"81.9"	""	"97.3"	""	"105.5"	"123.7"	"NoQuanLabels"	"671"	"64"	"35.000"	"28.000"	"1.26675470055477E-05"	""	"0.002711"	"0.02836"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0469"	"2"	"2"	"2"	"466.93600"	"1398.79346"	"1398.79427"	"-0.58"	"-0.00027"	"8/66"	"8"	"66"	"9544605.3258667"	"HCD"	"MS2"	"3.769294"	"59.0"	"83.027"	"72.3462"	"24419"	"24419"	"24402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.0"	""	"79.0"	""	"81.9"	""	"97.3"	""	"105.5"	"123.7"	""	"671"	"61"	"35.000"	"28.000"	"2.49857577245459E-05"	""	"9.9E-05"	"0.0004989"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.1579"	"0.0000"	"1"	"1"	"1"	"466.93610"	"1398.79374"	"1398.77398"	"14.13"	"0.00659"	"13/112"	"13"	"112"	"2984546.79333496"	"HCD"	"MS2"	"10.70033"	"27.9"	"100.000"	"71.3293"	"23978"	"23978"	"23958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	""	"34.1"	""	"41.2"	""	"41.1"	"0.3"	"50.7"	"51.4"	"NoQuanLabels"	"679"	"57"	"35.000"	"28.000"	"6.40973063018191E-05"	""	"0.002035"	"0.01839"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0545"	"0.0000"	"1"	"1"	"1"	"466.93619"	"1398.79401"	"1398.77398"	"14.32"	"0.00668"	"11/112"	"11"	"112"	"2742657.00305176"	"HCD"	"MS2"	"9.379829"	"24.8"	"100.000"	"71.4346"	"24052"	"24052"	"24034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"30.7"	""	"34.9"	""	"40.7"	""	"50.3"	"48.4"	"NoQuanLabels"	"689"	"55"	"35.000"	"28.000"	"9.75414542552887E-05"	"27"	"0.001951"	"0.01683"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0462"	"2"	"2"	"2"	"466.93665"	"1398.79538"	"1398.79427"	"0.80"	"0.00037"	"8/66"	"8"	"66"	"62457500.6518555"	"HCD"	"MS2"	"2.07049"	"51.4"	"15.534"	"72.0497"	"24299"	"24299"	"24282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.4"	""	"75.7"	""	"64.4"	""	"88.7"	""	"98.0"	"102.4"	""	"674"	"62"	"35.000"	"28.000"	"2.19093705645622E-05"	""	"0.0001686"	"0.001298"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0448"	"2"	"2"	"2"	"466.93683"	"1398.79593"	"1398.79427"	"1.19"	"0.00056"	"8/66"	"8"	"66"	"57995139.1259766"	"HCD"	"MS2"	"1.965658"	"63.6"	"21.202"	"71.7271"	"24172"	"24172"	"24155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.6"	""	"93.1"	""	"91.8"	""	"94.9"	"0.9"	"116.5"	"115.9"	""	"663"	"64"	"35.000"	"28.000"	"1.25742917518776E-05"	""	"0.0001991"	"0.003681"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"699.90192"	"1398.79656"	"1398.77398"	"16.14"	"0.01129"	"13/112"	"13"	"112"	"944437.48034668"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"71.5363"	"24063"	"24063"	"24037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.9"	""	"87.5"	""	"72.6"	""	"94.8"	""	"104.2"	"94.9"	"NoQuanLabels"	"667"	"42"	"35.000"	"28.000"	"0.00188840802894258"	""	"0.005426"	"0.06928"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TKLLPLEEHYR"	"[R].TKLLPLEEHYR.[F]"	""	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"1"	"3"	"3"	"0.0448"	"0.0000"	"1"	"1"	"1"	"466.93747"	"1398.79786"	"1398.77398"	"17.07"	"0.00796"	"8/112"	"8"	"112"	"59444333.8681641"	"HCD"	"MS2"	"2.012589"	"69.8"	"21.165"	"71.9298"	"24224"	"24224"	"24207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.7"	""	"95.3"	""	"104.8"	""	"115.2"	"0.7"	"126.6"	"131.3"	"NoQuanLabels"	"658"	"67"	"35.000"	"28.000"	"6.19720550442144E-06"	""	"0.007752"	"0.09888"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0448"	"2"	"2"	"2"	"466.93747"	"1398.79786"	"1398.79427"	"2.57"	"0.00120"	"8/66"	"8"	"66"	"59444333.8681641"	"HCD"	"MS2"	"2.012589"	"69.8"	"21.165"	"71.9298"	"24224"	"24224"	"24207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.7"	""	"95.3"	""	"104.8"	""	"115.2"	"0.7"	"126.6"	"131.3"	""	"658"	"64"	"35.000"	"28.000"	"1.24507610371924E-05"	""	"0.0001686"	"0.001497"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LLPLEEHYR"	"[K].lLPLEEHYR.[F]"	"N-Term(TMT6plex)"	"2"	"2"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1;EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q4V8H8; Q641Z6"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1; EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0323"	"2"	"2"	"2"	"466.93762"	"1398.79831"	"1398.79427"	"2.89"	"0.00135"	"8/66"	"8"	"66"	"58396229.0733643"	"HCD"	"MS2"	"1.728985"	"83.8"	"27.693"	"71.6286"	"24101"	"24101"	"24084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.7"	""	"108.2"	""	"125.1"	""	"129.7"	""	"155.1"	"163.1"	""	"624"	"60"	"34.000"	"27.000"	"3.35084696650468E-05"	""	"0.0001991"	"0.004832"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"699.91620"	"1398.82512"	"1398.82663"	"-1.08"	"-0.00075"	"5/100"	"5"	"100"	"225340.475097656"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"92.8460"	"32703"	"32703"	"32679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"16.4"	""	"23.9"	""	"27.5"	""	"25.0"	"27.9"	""	"544"	"25"	"34.000"	"27.000"	"0.0777264627797985"	"23"	"9.9E-05"	"0.001019"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.0968"	"0.0000"	"1"	"1"	"1"	"699.91681"	"1398.82634"	"1398.82663"	"-0.21"	"-0.00014"	"7/100"	"7"	"100"	"301151.303344727"	"HCD"	"MS2"	"8.657276"	"19.8"	"100.000"	"92.8732"	"32678"	"32678"	"32653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.0"	""	"21.6"	""	"33.7"	""	"28.7"	""	"36.9"	"35.6"	""	"533"	"31"	"34.000"	"27.000"	"0.0225786105868469"	""	"0.0007633"	"0.007484"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.2703"	"0.0000"	"1"	"1"	"1"	"699.91711"	"1398.82695"	"1398.82663"	"0.23"	"0.00016"	"8/100"	"8"	"100"	"562228.373596191"	"HCD"	"MS2"	"13.78916"	"29.3"	"100.000"	"92.5692"	"32560"	"32560"	"32536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"33.0"	""	"38.5"	""	"60.6"	""	"52.1"	"55.4"	""	"533"	"37"	"34.000"	"27.000"	"0.00512503945754557"	""	"0"	"0.0003604"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"699.91711"	"1398.82695"	"1398.82663"	"0.23"	"0.00016"	"9/100"	"9"	"100"	"561761.023254395"	"HCD"	"MS2"	"14.11155"	"29.3"	"100.000"	"92.5012"	"32568"	"32568"	"32545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"33.6"	""	"40.6"	""	"46.8"	"1.3"	"64.1"	"55.0"	""	"533"	"44"	"34.000"	"27.000"	"0.000965377590780502"	""	"0"	"9.155E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETPGPQIK"	"[K].aETPGPQIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"699.91968"	"1398.83208"	"1398.83569"	"-2.58"	"-0.00180"	"7/70"	"7"	"70"	"1456746.85449219"	"HCD"	"MS2"	"0"	"112.2"	"100.000"	"46.3206"	"13830"	"13830"	"13818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.1"	""	"137.2"	""	"166.8"	""	"180.9"	""	"215.4"	"214.7"	""	"496"	"44"	"33.000"	"26.000"	"0.00105305651858686"	"25"	"0.0001686"	"0.001594"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETPGPQIK"	"[K].aETPGPQIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"699.91986"	"1398.83245"	"1398.83569"	"-2.32"	"-0.00162"	"12/70"	"12"	"70"	"1104897.58135986"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"46.0318"	"13748"	"13748"	"13717"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.9"	""	"112.7"	""	"129.2"	""	"137.4"	"1.7"	"186.9"	"185.3"	""	"494"	"38"	"33.000"	"26.000"	"0.00373849628363743"	"24"	"0.0001686"	"0.001308"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETPGPQIK"	"[K].aETPGPQIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"699.92059"	"1398.83391"	"1398.83569"	"-1.27"	"-0.00089"	"6/70"	"6"	"70"	"455111.433776855"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"45.9942"	"13698"	"13698"	"13669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.8"	""	"44.0"	""	"48.4"	""	"64.7"	""	"62.5"	"68.6"	""	"480"	"30"	"33.000"	"26.000"	"0.0229198220645144"	"21"	"0.0009352"	"0.008121"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETPGPQIK"	"[K].aETPGPQIk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"699.92108"	"1398.83489"	"1398.83569"	"-0.57"	"-0.00040"	"12/70"	"12"	"70"	"529471.530822754"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"45.6825"	"13605"	"13605"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.6"	""	"55.4"	""	"59.9"	""	"70.3"	""	"87.1"	"99.8"	""	"447"	"39"	"33.000"	"26.000"	"0.0031280776659498"	"22"	"0.0001991"	"0.003055"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"700.38928"	"1399.77129"	"1399.77426"	"-2.12"	"-0.00149"	"8/108"	"8"	"108"	"875770.031738281"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"56.5733"	"17987"	"17987"	"17972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.3"	""	"63.3"	""	"62.8"	""	"71.1"	""	"83.4"	"72.3"	""	"714"	"38"	"35.000"	"28.000"	"0.00526827232379494"	"19"	"0"	"1.893E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"700.38965"	"1399.77202"	"1399.77426"	"-1.60"	"-0.00112"	"7/108"	"7"	"108"	"852346.19354248"	"HCD"	"MS2"	"0"	"48.1"	"100.000"	"56.2830"	"17905"	"17905"	"17882"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"62.5"	""	"71.9"	""	"74.1"	"2.6"	"86.1"	"76.5"	""	"729"	"42"	"35.000"	"28.000"	"0.00254505711286129"	"24"	"0"	"2.377E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"700.38971"	"1399.77214"	"1399.77426"	"-1.51"	"-0.00106"	"8/108"	"8"	"108"	"319287.994934082"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"56.8986"	"18118"	"18118"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.3"	""	"28.9"	""	"27.4"	""	"40.5"	""	"42.7"	"42.1"	""	"723"	"48"	"35.000"	"28.000"	"0.000613915080364921"	"23"	"0"	"5.987E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"700.38989"	"1399.77251"	"1399.77426"	"-1.25"	"-0.00088"	"11/108"	"11"	"108"	"691189.385009766"	"HCD"	"MS2"	"0"	"41.6"	"100.000"	"55.9737"	"17780"	"17780"	"17763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.0"	""	"59.0"	""	"60.3"	""	"70.4"	"0.9"	"70.8"	"69.1"	""	"724"	"33"	"35.000"	"28.000"	"0.0167767784944536"	"22"	"0"	"6.816E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQIEAGTPGR"	"[K].iEQIEAGTPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"700.39020"	"1399.77312"	"1399.77426"	"-0.81"	"-0.00057"	"9/108"	"9"	"108"	"661068.135131836"	"HCD"	"MS2"	"100"	"46.5"	"100.000"	"56.2937"	"17875"	"17875"	"17857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.6"	""	"57.0"	""	"58.0"	""	"91.9"	""	"90.5"	"81.5"	""	"743"	"22"	"35.000"	"28.000"	"0.22027175808147"	"19"	"0"	"0.0001898"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"700.39484"	"1399.78240"	"1399.78332"	"-0.66"	"-0.00046"	"8/76"	"8"	"76"	"950125.005737305"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"35.3577"	"9380"	"9380"	"9358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.8"	""	"86.8"	""	"76.3"	""	"100.7"	""	"108.4"	"109.9"	""	"711"	"53"	"35.000"	"28.000"	"0.000167432439534117"	"23"	"0.0001991"	"0.004524"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"700.39502"	"1399.78276"	"1399.78332"	"-0.40"	"-0.00028"	"5/76"	"5"	"76"	"385508.139099121"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"35.6514"	"9499"	"9499"	"9478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"33.9"	""	"38.9"	""	"49.2"	""	"50.8"	"56.2"	""	"737"	"34"	"35.000"	"28.000"	"0.0150465693863597"	"21"	"0.004893"	"0.06068"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"700.39502"	"1399.78276"	"1399.78332"	"-0.40"	"-0.00028"	"7/76"	"7"	"76"	"1206242.27587891"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"35.2474"	"9373"	"9373"	"9349"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.0"	""	"108.2"	""	"101.4"	""	"130.2"	""	"134.5"	"132.5"	""	"737"	"38"	"35.000"	"28.000"	"0.00542547157146457"	"21"	"0.0001686"	"0.001701"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPDASPEPK"	"[K].tPDASPEPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"O88761"	"26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus OX=10116 GN=Psmd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"700.39514"	"1399.78301"	"1399.78332"	"-0.22"	"-0.00015"	"6/76"	"6"	"76"	"277183.338623047"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"35.5436"	"9492"	"9492"	"9474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"30.9"	""	"26.3"	""	"34.3"	""	"36.3"	"37.4"	""	"736"	"35"	"35.000"	"28.000"	"0.0123836257530181"	"23"	"0.002462"	"0.02296"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPETGLFTLR"	"[R].hPETGLFTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"467.26672"	"1399.78562"	"1399.78952"	"-2.78"	"-0.00130"	"8/82"	"8"	"82"	"1255196.30639648"	"HCD"	"MS2"	"54.70655"	"30.9"	"100.000"	"61.8371"	"20126"	"20126"	"20100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.5"	""	"40.0"	""	"36.2"	""	"56.9"	""	"62.4"	"67.4"	""	"741"	"38"	"35.000"	"28.000"	"0.00609239723451132"	"18"	"0"	"8.167E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPETGLFTLR"	"[R].hPETGLFTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"467.26794"	"1399.78928"	"1399.78952"	"-0.17"	"-0.00008"	"7/82"	"7"	"82"	"3248281.13360596"	"HCD"	"MS2"	"9.990348"	"46.3"	"100.000"	"62.1317"	"20244"	"20244"	"20224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"59.5"	""	"64.4"	""	"76.6"	""	"90.2"	"97.8"	""	"751"	"44"	"35.000"	"28.000"	"0.00154031640671471"	"21"	"0"	"0.0001119"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPETGLFTLR"	"[R].hPETGLFTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"467.26797"	"1399.78937"	"1399.78952"	"-0.10"	"-0.00005"	"7/82"	"7"	"82"	"3145749.90020752"	"HCD"	"MS2"	"5.262073"	"47.5"	"100.000"	"62.0836"	"20258"	"20258"	"20239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.8"	""	"67.2"	""	"59.5"	""	"76.9"	"1.8"	"94.1"	"98.4"	""	"745"	"42"	"35.000"	"28.000"	"0.00224970864442701"	"21"	"0"	"0.0001098"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPQVPAIFR"	"[K].dQPQVPAIFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50298; P50297"	"Arylamine N-acetyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Nat2 PE=2 SV=1; Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"700.39844"	"1399.78960"	"1399.78952"	"0.06"	"0.00004"	"5/88"	"5"	"88"	"185013.32824707"	"HCD"	"MS2"	"26.20032"	"11.9"	"100.000"	"93.1197"	"32814"	"32814"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"13.2"	""	"16.5"	""	"24.9"	""	"21.7"	"24.0"	""	"744"	"19"	"35.000"	"28.000"	"0.491521975917406"	"16"	"0.005426"	"0.06892"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPETGLFTLR"	"[R].hPETGLFTLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"467.26816"	"1399.78992"	"1399.78952"	"0.29"	"0.00014"	"8/82"	"8"	"82"	"1064284.36206055"	"HCD"	"MS2"	"46.19307"	"29.5"	"100.000"	"61.7681"	"20131"	"20131"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"33.1"	""	"35.8"	""	"45.3"	""	"62.1"	"65.3"	""	"744"	"34"	"35.000"	"28.000"	"0.0142083268752497"	"18"	"0.0001991"	"0.002842"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQPQVPAIFR"	"[K].dQPQVPAIFR.[L]"	"N-Term(TMT6plex)"	"1"	"2"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50298; P50297"	"Arylamine N-acetyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Nat2 PE=2 SV=1; Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"700.39917"	"1399.79106"	"1399.78952"	"1.11"	"0.00077"	"4/88"	"4"	"88"	"176493.771911621"	"HCD"	"MS2"	"17.51441"	"11.7"	"100.000"	"93.1955"	"32808"	"32808"	"32783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"11.2"	""	"15.8"	""	"21.6"	""	"21.3"	"22.2"	""	"721"	"18"	"35.000"	"28.000"	"0.549421017743923"	"20"	"0.00504"	"0.06383"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.3929"	"0.0000"	"1"	"1"	"1"	"700.40894"	"1399.81059"	"1399.81064"	"-0.04"	"-0.00003"	"9/100"	"9"	"100"	"376509.342590332"	"HCD"	"MS2"	"38.33173"	"17.7"	"100.000"	"98.8504"	"35128"	"35128"	"35110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"26.6"	""	"27.1"	""	"27.6"	""	"30.2"	"35.2"	""	"681"	"28"	"35.000"	"28.000"	"0.0542147071560924"	""	"0.0001991"	"0.003742"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGGQILIADLR"	"[R].nGGQILIADLR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"Q5XFW8"	"Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1"	"0"	"2"	"2"	"0.2174"	"0.0000"	"1"	"1"	"1"	"700.40894"	"1399.81059"	"1399.81064"	"-0.04"	"-0.00003"	"12/100"	"12"	"100"	"419605.885498047"	"HCD"	"MS2"	"54.01503"	"19.6"	"100.000"	"98.7806"	"35070"	"35070"	"35050"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"32.6"	""	"30.2"	""	"32.0"	""	"34.6"	"32.9"	""	"681"	"23"	"35.000"	"28.000"	"0.175435353480088"	""	"0.002525"	"0.02442"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVILEGELER"	"[K].lVILEGELER.[AS]"	"N-Term(TMT6plex)"	"2"	"2"	"P09495; P58775"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"P09495; P58775"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"700.42120"	"1399.83513"	"1399.83580"	"-0.48"	"-0.00033"	"8/80"	"8"	"80"	"892969.169006348"	"HCD"	"MS2"	"42.50257"	"44.8"	"100.000"	"111.0210"	"39922"	"39922"	"39895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.2"	""	"60.5"	""	"71.1"	""	"75.5"	""	"80.8"	"92.3"	""	"540"	"54"	"34.000"	"27.000"	"0.000116242184832762"	"23"	"0"	"3.81E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVILEGELER"	"[K].lVILEGELER.[AS]"	"N-Term(TMT6plex)"	"2"	"2"	"P09495; P58775"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"P09495; P58775"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"700.42145"	"1399.83562"	"1399.83580"	"-0.13"	"-0.00009"	"7/80"	"7"	"80"	"495982.380310059"	"HCD"	"MS2"	"19.92147"	"28.1"	"100.000"	"111.1482"	"39987"	"39987"	"39964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"34.8"	""	"47.3"	""	"46.9"	"0.4"	"53.3"	"55.3"	""	"540"	"42"	"34.000"	"27.000"	"0.00173925701689098"	"22"	"0"	"5.338E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTQVDGNSPVR"	"[K].vTQVDGNSPVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"700.88727"	"1400.76726"	"1400.76951"	"-1.61"	"-0.00112"	"8/108"	"8"	"108"	"745561.551330566"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"39.0265"	"10870"	"10870"	"10845"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.4"	""	"53.9"	""	"50.9"	""	"66.4"	""	"79.6"	"74.2"	""	"745"	"56"	"35.000"	"28.000"	"9.61891921011386E-05"	"23"	"0"	"3.265E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGDLQNGK"	"[R].nPGDLQNGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"700.89954"	"1400.79180"	"1400.78980"	"1.43"	"0.00100"	"8/80"	"8"	"80"	"283801.041442871"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"38.4660"	"10641"	"10641"	"10610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"34.4"	""	"22.2"	""	"42.4"	""	"40.3"	"40.2"	""	"768"	"44"	"35.000"	"28.000"	"0.00166851926081884"	"22"	"0.0001991"	"0.00255"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGDLQNGK"	"[R].nPGDLQNGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"Q63514"	"C4b-binding protein alpha chain OS=Rattus norvegicus OX=10116 GN=C4bpa PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"700.89954"	"1400.79180"	"1400.78980"	"1.43"	"0.00100"	"6/80"	"6"	"80"	"278002.860168457"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"38.4222"	"10659"	"10659"	"10628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.3"	""	"39.5"	""	"29.1"	""	"38.7"	""	"46.1"	"41.7"	""	"768"	"17"	"35.000"	"28.000"	"0.697158014504884"	"14"	"0.009444"	"0.1252"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGHEFK"	"[K].lPDGHEFk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"467.60223"	"1400.79215"	"1400.79382"	"-1.19"	"-0.00056"	"9/62"	"9"	"62"	"3926985.98413086"	"HCD"	"MS2"	"29.85991"	"180.3"	"100.000"	"57.9809"	"18594"	"18594"	"18574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.5"	""	"220.1"	""	"220.0"	""	"339.7"	""	"361.7"	"381.2"	""	"768"	"26"	"35.000"	"28.000"	"0.107233683503514"	"21"	"9.9E-05"	"0.0006011"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.6512"	"0.0000"	"1"	"1"	"1"	"467.60229"	"1400.79233"	"1400.79466"	"-1.66"	"-0.00078"	"10/90"	"10"	"90"	"1018539.11895752"	"HCD"	"MS2"	"16.30713"	"21.2"	"100.000"	"68.3942"	"22786"	"22786"	"22764"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"26.8"	""	"32.8"	""	"32.6"	"1.1"	"39.4"	"40.9"	""	"768"	"43"	"35.000"	"28.000"	"0.00179197202040687"	""	"0"	"0.0003137"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDGHEFK"	"[K].lPDGHEFk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"P11762"	"Galectin-1 OS=Rattus norvegicus OX=10116 GN=Lgals1 PE=1 SV=2"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"467.60239"	"1400.79261"	"1400.79382"	"-0.87"	"-0.00041"	"7/62"	"7"	"62"	"4966620.93328857"	"HCD"	"MS2"	"15.64251"	"216.7"	"100.000"	"58.3122"	"18694"	"18694"	"18670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.2"	""	"267.1"	""	"235.3"	""	"430.9"	""	"442.1"	"441.8"	""	"763"	"38"	"35.000"	"28.000"	"0.00638990707204086"	"28"	"0"	"0.0002332"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"700.90027"	"1400.79326"	"1400.79466"	"-1.00"	"-0.00070"	"7/90"	"7"	"90"	"8754264.62145996"	"HCD"	"MS2"	"0"	"338.6"	"100.000"	"68.4138"	"22827"	"22827"	"22810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"467.4"	""	"464.8"	""	"469.1"	""	"534.8"	""	"663.0"	"612.9"	""	"777"	"46"	"35.000"	"28.000"	"0.0010724844971416"	"23"	"0"	"0.0001169"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"467.60263"	"1400.79334"	"1400.79466"	"-0.94"	"-0.00044"	"8/90"	"8"	"90"	"440586.911193848"	"HCD"	"MS2"	"17.87284"	"15.7"	"100.000"	"68.7548"	"22966"	"22966"	"22938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"19.9"	""	"21.8"	""	"24.7"	""	"32.4"	"28.5"	""	"777"	"31"	"35.000"	"28.000"	"0.0307178646977932"	"21"	"0.0001991"	"0.003388"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"700.90039"	"1400.79350"	"1400.79466"	"-0.82"	"-0.00058"	"9/94"	"9"	"94"	"348162.385314941"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"86.3201"	"30045"	"30045"	"30032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	""	"23.7"	""	"25.9"	""	"31.0"	"1.2"	"32.1"	"39.2"	""	"777"	"39"	"35.000"	"28.000"	"0.00526491086698378"	"19"	"0"	"4.376E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"700.90039"	"1400.79350"	"1400.79466"	"-0.82"	"-0.00058"	"6/90"	"6"	"90"	"1578324.97390747"	"HCD"	"MS2"	"33.92172"	"75.4"	"100.000"	"68.1142"	"22704"	"22704"	"22684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.6"	""	"101.8"	""	"95.0"	""	"122.6"	"0.8"	"156.2"	"130.3"	""	"777"	"29"	"35.000"	"28.000"	"0.050279508440332"	"21"	"0.0001991"	"0.002708"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"700.90039"	"1400.79350"	"1400.79466"	"-0.82"	"-0.00058"	"7/90"	"7"	"90"	"8855544.20800781"	"HCD"	"MS2"	"0"	"345.1"	"100.000"	"68.3849"	"22782"	"22782"	"22764"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"470.1"	""	"468.2"	""	"481.6"	""	"551.7"	"0.1"	"682.1"	"617.1"	""	"777"	"46"	"35.000"	"28.000"	"0.00109242347260999"	"23"	"0"	"0.0001448"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"467.60269"	"1400.79352"	"1400.79466"	"-0.81"	"-0.00038"	"10/90"	"10"	"90"	"999586.865722656"	"HCD"	"MS2"	"32.81592"	"20.9"	"100.000"	"68.3998"	"22821"	"22821"	"22794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"23.5"	""	"30.2"	""	"32.7"	"1.3"	"48.8"	"39.7"	""	"777"	"49"	"35.000"	"28.000"	"0.000539996597226388"	""	"9.9E-05"	"0.0006927"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"700.90045"	"1400.79363"	"1400.79466"	"-0.74"	"-0.00052"	"7/90"	"7"	"90"	"4441759.33880615"	"HCD"	"MS2"	"0"	"165.0"	"100.000"	"68.6730"	"22900"	"22900"	"22886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.9"	""	"208.3"	""	"227.8"	""	"258.7"	"1.3"	"320.0"	"313.7"	""	"777"	"46"	"35.000"	"28.000"	"0.00106265190017016"	"24"	"0"	"7.035E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"467.60275"	"1400.79370"	"1400.79466"	"-0.68"	"-0.00032"	"10/94"	"10"	"94"	"521268.474182129"	"HCD"	"MS2"	"10.05932"	"12.7"	"100.000"	"85.9949"	"29916"	"29916"	"29900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"16.2"	""	"23.8"	""	"17.5"	""	"29.5"	"23.2"	""	"771"	"28"	"35.000"	"28.000"	"0.0668381441134221"	"20"	"0"	"0.0002634"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"700.90051"	"1400.79375"	"1400.79466"	"-0.65"	"-0.00046"	"7/90"	"7"	"90"	"4497651.38952637"	"HCD"	"MS2"	"0"	"164.9"	"100.000"	"68.7274"	"22955"	"22955"	"22938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.1"	""	"219.6"	""	"232.2"	""	"255.0"	"0.3"	"331.2"	"295.5"	""	"771"	"46"	"35.000"	"28.000"	"0.00105444609399124"	"25"	"0"	"7.371E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"467.60284"	"1400.79398"	"1400.79466"	"-0.49"	"-0.00023"	"14/94"	"14"	"94"	"1304402.9730835"	"HCD"	"MS2"	"12.94857"	"21.2"	"100.000"	"85.3795"	"29668"	"29668"	"29652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"26.8"	""	"31.2"	""	"42.8"	"2.0"	"39.9"	"34.7"	""	"779"	"43"	"35.000"	"28.000"	"0.0020207261516283"	"19"	"0"	"3.254E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"700.90063"	"1400.79399"	"1400.79466"	"-0.48"	"-0.00033"	"12/94"	"12"	"94"	"208306.615539551"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"86.6012"	"30155"	"30155"	"30144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"19.2"	""	"21.7"	""	"20.8"	""	"34.7"	"31.6"	""	"780"	"22"	"35.000"	"28.000"	"0.272310637590097"	"24"	"0.002035"	"0.01837"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"700.90070"	"1400.79411"	"1400.79466"	"-0.39"	"-0.00027"	"8/94"	"8"	"94"	"713720.657165527"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"85.1652"	"29581"	"29581"	"29559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.0"	""	"53.1"	""	"50.5"	""	"58.5"	"0.1"	"56.2"	"65.5"	""	"780"	"49"	"35.000"	"28.000"	"0.000520073358543696"	"23"	"0"	"2.333E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"467.60294"	"1400.79425"	"1400.79466"	"-0.29"	"-0.00014"	"11/94"	"11"	"94"	"576065.237060547"	"HCD"	"MS2"	"8.096361"	"16.2"	"100.000"	"85.9850"	"29942"	"29942"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"21.0"	""	"23.0"	""	"25.7"	"1.3"	"32.9"	"32.7"	""	"780"	"41"	"35.000"	"28.000"	"0.0027865356716945"	"21"	"0"	"2.883E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"467.60297"	"1400.79435"	"1400.79466"	"-0.22"	"-0.00010"	"10/94"	"10"	"94"	"3014984.91174316"	"HCD"	"MS2"	"5.825074"	"37.3"	"100.000"	"85.6789"	"29789"	"29789"	"29778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"39.5"	""	"61.0"	""	"59.5"	""	"65.4"	"75.1"	""	"780"	"49"	"35.000"	"28.000"	"0.00048536069859084"	"22"	"0"	"2.361E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7903"	"0.0000"	"1"	"1"	"1"	"700.90082"	"1400.79436"	"1400.79466"	"-0.21"	"-0.00015"	"9/94"	"9"	"94"	"11162194.1698608"	"HCD"	"MS2"	"0"	"370.7"	"87.201"	"85.4457"	"29725"	"29725"	"29713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"624.9"	""	"544.8"	""	"500.9"	""	"519.1"	""	"617.6"	"704.7"	""	"780"	"62"	"35.000"	"28.000"	"2.34998238568999E-05"	""	"0"	"1.04E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"700.90088"	"1400.79448"	"1400.79466"	"-0.13"	"-0.00009"	"9/94"	"9"	"94"	"705713.533691406"	"HCD"	"MS2"	"11.09326"	"35.0"	"100.000"	"85.1625"	"29609"	"29609"	"29589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.8"	""	"54.0"	""	"45.6"	""	"52.6"	"0.2"	"60.2"	"58.3"	""	"780"	"60"	"35.000"	"28.000"	"3.88208112767095E-05"	"27"	"0"	"1.265E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"700.90088"	"1400.79448"	"1400.79466"	"-0.13"	"-0.00009"	"7/90"	"7"	"90"	"1987514.09863281"	"HCD"	"MS2"	"39.72585"	"91.4"	"100.000"	"68.0925"	"22663"	"22663"	"22643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.9"	""	"118.6"	""	"124.9"	""	"146.9"	"1.4"	"184.6"	"152.0"	""	"780"	"40"	"35.000"	"28.000"	"0.00374166246291214"	"20"	"0"	"0.0003348"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"700.90088"	"1400.79448"	"1400.79466"	"-0.13"	"-0.00009"	"9/94"	"9"	"94"	"13481465.9324951"	"HCD"	"MS2"	"0.08221637"	"270.2"	"52.601"	"85.7500"	"29847"	"29847"	"29834"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.5"	""	"370.2"	""	"368.7"	""	"363.3"	"0.3"	"472.3"	"548.9"	""	"780"	"54"	"35.000"	"28.000"	"0.000146239470875738"	"27"	"0"	"5.521E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"700.90088"	"1400.79448"	"1400.79466"	"-0.13"	"-0.00009"	"15/94"	"15"	"94"	"12414389.9203491"	"HCD"	"MS2"	"0"	"322.2"	"69.440"	"85.7620"	"29823"	"29823"	"29808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"503.2"	""	"440.9"	""	"479.1"	""	"434.0"	""	"570.4"	"625.2"	""	"780"	"57"	"35.000"	"28.000"	"8.20473591508924E-05"	"27"	"0"	"8.431E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"700.90094"	"1400.79460"	"1400.79466"	"-0.04"	"-0.00003"	"12/94"	"12"	"94"	"288639.667480469"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"86.3583"	"30093"	"30093"	"30071"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"23.2"	""	"22.1"	""	"28.6"	"0.8"	"30.9"	"29.0"	""	"778"	"29"	"35.000"	"28.000"	"0.0467680865066174"	"24"	"9.9E-05"	"0.0004284"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVDTLPQETR"	"[R].lVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.90094"	"1400.79460"	"1400.79466"	"-0.04"	"-0.00003"	"6/90"	"6"	"90"	"453203.35534668"	"HCD"	"MS2"	"0"	"27.5"	"100.000"	"69.0406"	"23082"	"23082"	"23061"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"42.7"	""	"36.2"	""	"43.0"	""	"51.7"	"47.9"	""	"778"	"32"	"35.000"	"28.000"	"0.0253483445289668"	"14"	"0.0001991"	"0.002277"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"467.60306"	"1400.79462"	"1400.79466"	"-0.03"	"-0.00001"	"10/94"	"10"	"94"	"2732896.67700195"	"HCD"	"MS2"	"3.883491"	"33.8"	"100.000"	"85.6876"	"29821"	"29821"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.4"	""	"40.3"	""	"50.9"	""	"47.5"	"1.5"	"61.5"	"67.4"	""	"778"	"51"	"35.000"	"28.000"	"0.000280510809402148"	"23"	"0"	"2.273E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"700.90100"	"1400.79473"	"1400.79466"	"0.05"	"0.00003"	"9/94"	"9"	"94"	"1725663.78564453"	"HCD"	"MS2"	"0.6136857"	"76.4"	"100.000"	"86.0480"	"29938"	"29938"	"29921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.2"	""	"104.0"	""	"106.6"	""	"98.9"	""	"129.8"	"160.8"	""	"778"	"62"	"35.000"	"28.000"	"2.41518054315495E-05"	"28"	"0"	"1.512E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"467.60312"	"1400.79480"	"1400.79466"	"0.10"	"0.00005"	"10/94"	"10"	"94"	"1438925.46655273"	"HCD"	"MS2"	"14.80106"	"21.5"	"100.000"	"85.3880"	"29701"	"29701"	"29683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.7"	""	"32.6"	""	"34.8"	""	"32.8"	""	"38.9"	"34.9"	""	"778"	"51"	"35.000"	"28.000"	"0.000295086676686352"	"23"	"0"	"1.304E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"700.90118"	"1400.79509"	"1400.79466"	"0.31"	"0.00022"	"7/94"	"7"	"94"	"211738.352050781"	"HCD"	"MS2"	"25.17661"	"17.6"	"100.000"	"86.6721"	"30217"	"30217"	"30196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"22.3"	""	"26.0"	""	"27.2"	""	"31.8"	"33.2"	""	"774"	"15"	"35.000"	"28.000"	"1.31434980492488"	"25"	"0.002559"	"0.02593"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"700.90125"	"1400.79521"	"1400.79466"	"0.40"	"0.00028"	"9/94"	"9"	"94"	"11519997.7417603"	"HCD"	"MS2"	"0"	"423.3"	"100.000"	"85.4762"	"29707"	"29707"	"29689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"706.1"	""	"618.6"	""	"597.5"	""	"593.6"	""	"699.1"	"790.8"	""	"774"	"60"	"35.000"	"28.000"	"3.6451127385434E-05"	"28"	"0"	"1.398E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"700.90131"	"1400.79534"	"1400.79466"	"0.48"	"0.00034"	"7/94"	"7"	"94"	"162818.362609863"	"HCD"	"MS2"	"57.53196"	"12.2"	"100.000"	"86.9151"	"30281"	"30281"	"30257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"10.7"	""	"14.6"	""	"21.1"	""	"21.9"	"26.1"	""	"772"	"7"	"35.000"	"28.000"	"8.38662655041406"	"18"	"0.006267"	"0.07774"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDIDSAPITAR"	"[R].lDIDSAPITAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"700.90167"	"1400.79607"	"1400.79466"	"1.01"	"0.00070"	"9/94"	"9"	"94"	"1563936.91650391"	"HCD"	"MS2"	"1.465025"	"72.8"	"100.000"	"86.0475"	"29968"	"29968"	"29951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.4"	""	"99.3"	""	"109.9"	""	"95.2"	""	"131.6"	"147.1"	""	"765"	"51"	"35.000"	"28.000"	"0.000296231637659464"	"23"	"0"	"7.64E-07"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAIQQSGVER"	"[R].lAAIQQSGVER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"700.90582"	"1400.80437"	"1400.80589"	"-1.09"	"-0.00076"	"9/98"	"9"	"98"	"957424.591552734"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"55.1438"	"17412"	"17412"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.4"	""	"64.8"	""	"76.0"	""	"84.9"	"0.8"	"91.8"	"94.2"	""	"804"	"49"	"36.000"	"29.000"	"0.000567840092938347"	"19"	"0"	"1.577E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAIQQSGVER"	"[R].lAAIQQSGVER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"P28073"	"Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"700.90619"	"1400.80510"	"1400.80589"	"-0.57"	"-0.00040"	"7/98"	"7"	"98"	"483728.213867188"	"HCD"	"MS2"	"16.02877"	"30.5"	"100.000"	"54.9642"	"17373"	"17373"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"40.1"	""	"51.3"	""	"48.8"	"1.5"	"51.1"	"59.1"	""	"789"	"31"	"35.000"	"28.000"	"0.0304822490820254"	"15"	"0"	"2.608E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLQESALIR"	"[R].eLLQESALIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"700.91870"	"1400.83013"	"1400.83105"	"-0.66"	"-0.00046"	"8/94"	"8"	"94"	"425717.995544434"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"97.1814"	"34454"	"34454"	"34431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.8"	""	"31.8"	""	"40.0"	""	"37.1"	""	"50.3"	"38.9"	""	"735"	"53"	"35.000"	"28.000"	"0.000203356165136783"	""	"0"	"4.454E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLQESALIR"	"[R].eLLQESALIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"700.91876"	"1400.83025"	"1400.83105"	"-0.57"	"-0.00040"	"8/94"	"8"	"94"	"295556.377075195"	"HCD"	"MS2"	"25.16442"	"18.1"	"100.000"	"97.0820"	"34383"	"34383"	"34361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"24.6"	""	"30.3"	""	"26.5"	""	"36.8"	"29.8"	""	"735"	"56"	"35.000"	"28.000"	"8.38025711460153E-05"	"28"	"0"	"8.371E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLQESALIR"	"[R].eLLQESALIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"700.91919"	"1400.83110"	"1400.83105"	"0.04"	"0.00003"	"8/94"	"8"	"94"	"462914.347473145"	"HCD"	"MS2"	"4.561138"	"26.2"	"100.000"	"97.3727"	"34500"	"34500"	"34488"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"39.4"	""	"39.1"	""	"41.7"	"2.1"	"42.2"	"50.7"	""	"737"	"55"	"35.000"	"28.000"	"0.000128658206253859"	""	"0"	"1.674E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLQESALIR"	"[R].eLLQESALIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"700.91968"	"1400.83208"	"1400.83105"	"0.74"	"0.00052"	"8/94"	"8"	"94"	"286698.337646484"	"HCD"	"MS2"	"15.55234"	"19.7"	"100.000"	"97.4906"	"34579"	"34579"	"34557"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"25.2"	""	"29.7"	""	"29.2"	"1.1"	"34.9"	"41.0"	""	"732"	"40"	"35.000"	"28.000"	"0.00391274085795492"	"23"	"0"	"5.48E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"467.62152"	"1400.85001"	"1400.85134"	"-0.95"	"-0.00044"	"5/80"	"5"	"80"	"3206567.26477051"	"HCD"	"MS2"	"13.70927"	"116.6"	"100.000"	"59.6887"	"19289"	"19289"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.0"	""	"151.4"	""	"207.6"	""	"210.1"	"0.1"	"182.7"	"207.6"	""	"590"	"30"	"34.000"	"27.000"	"0.0308902921675015"	"19"	"0"	"1.348E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"700.92883"	"1400.85039"	"1400.85134"	"-0.68"	"-0.00047"	"16/80"	"16"	"80"	"1854240.96270752"	"HCD"	"MS2"	"13.48846"	"127.2"	"100.000"	"59.4978"	"19177"	"19177"	"19157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.1"	""	"179.8"	""	"213.4"	""	"250.1"	""	"184.6"	"211.1"	""	"590"	"59"	"34.000"	"27.000"	"3.67131810472559E-05"	"23"	"0"	"4.383E-06"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"467.62170"	"1400.85056"	"1400.85134"	"-0.55"	"-0.00026"	"5/80"	"5"	"80"	"3269962.92498779"	"HCD"	"MS2"	"35.34793"	"116.4"	"100.000"	"59.5527"	"19200"	"19200"	"19173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.7"	""	"153.3"	""	"198.6"	""	"214.3"	"1.1"	"190.4"	"203.4"	""	"590"	"32"	"34.000"	"27.000"	"0.0186561496155985"	"19"	"0"	"4.996E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"467.62177"	"1400.85074"	"1400.85134"	"-0.42"	"-0.00020"	"5/80"	"5"	"80"	"3278515.93322754"	"HCD"	"MS2"	"11.16729"	"119.8"	"100.000"	"59.8522"	"19322"	"19322"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.9"	""	"153.5"	""	"208.1"	""	"238.6"	"1.0"	"183.8"	"210.5"	""	"622"	"32"	"34.000"	"27.000"	"0.0198043407002362"	"19"	"0"	"3.047E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"467.62177"	"1400.85074"	"1400.85134"	"-0.42"	"-0.00020"	"5/80"	"5"	"80"	"3112003.36871338"	"HCD"	"MS2"	"23.97086"	"111.5"	"100.000"	"59.3825"	"19165"	"19165"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.8"	""	"156.0"	""	"187.1"	""	"223.4"	""	"162.4"	"198.1"	""	"622"	"35"	"34.000"	"27.000"	"0.010858263811384"	"20"	"0"	"2.113E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"700.92950"	"1400.85173"	"1400.85134"	"0.28"	"0.00020"	"9/80"	"9"	"80"	"3604786.94958496"	"HCD"	"MS2"	"1.859175"	"234.0"	"100.000"	"59.8175"	"19307"	"19307"	"19290"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"272.4"	"2.1"	"317.7"	""	"388.8"	""	"452.7"	""	"357.7"	"424.9"	""	"622"	"76"	"34.000"	"27.000"	"8.31304993094288E-07"	"26"	"0"	"7.813E-07"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPAVDVAVK"	"[R].gSPAVDVAVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"P02767"	"Transthyretin OS=Rattus norvegicus OX=10116 GN=Ttr PE=1 SV=1"	"0"	"2"	"2"	"0.8904"	"0.0000"	"1"	"1"	"1"	"700.92950"	"1400.85173"	"1400.85134"	"0.28"	"0.00020"	"9/80"	"9"	"80"	"4597090.21209717"	"HCD"	"MS2"	"0.9641684"	"272.5"	"100.000"	"59.5458"	"19230"	"19230"	"19217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"320.5"	""	"376.4"	""	"477.0"	""	"542.3"	""	"389.7"	"471.7"	""	"622"	"73"	"34.000"	"27.000"	"1.40203995112394E-06"	"25"	"0"	"7.932E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"701.33673"	"1401.66619"	"1401.66702"	"-0.59"	"-0.00042"	"9/80"	"9"	"80"	"6350772.80755615"	"HCD"	"MS2"	"0"	"233.2"	"100.000"	"80.2739"	"27606"	"27606"	"27594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"401.3"	""	"307.7"	""	"338.4"	""	"244.0"	"0.8"	"456.3"	"461.5"	""	"357"	"49"	"32.000"	"25.000"	"0.000201204745927329"	"25"	"0"	"2.026E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"701.33691"	"1401.66655"	"1401.66702"	"-0.33"	"-0.00023"	"13/80"	"13"	"80"	"3277049.53045654"	"HCD"	"MS2"	"2.843017"	"130.7"	"100.000"	"80.5594"	"27722"	"27722"	"27705"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.1"	""	"196.2"	""	"180.4"	""	"138.0"	"0.6"	"254.6"	"257.8"	""	"372"	"51"	"32.000"	"25.000"	"0.000137250186804013"	""	"0"	"1.149E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"701.33698"	"1401.66667"	"1401.66702"	"-0.24"	"-0.00017"	"13/80"	"13"	"80"	"571455.455200195"	"HCD"	"MS2"	"8.250799"	"30.4"	"100.000"	"80.8686"	"27847"	"27847"	"27830"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.1"	""	"41.3"	""	"44.7"	""	"35.2"	"3.2"	"60.0"	"56.2"	""	"374"	"42"	"32.000"	"25.000"	"0.0011372124523912"	""	"0"	"9.504E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"701.33710"	"1401.66692"	"1401.66702"	"-0.07"	"-0.00005"	"9/80"	"9"	"80"	"2171080.86755371"	"HCD"	"MS2"	"0"	"92.0"	"100.000"	"79.8176"	"27447"	"27447"	"27429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.3"	""	"140.5"	""	"123.4"	""	"99.1"	""	"169.6"	"176.3"	""	"370"	"44"	"32.000"	"25.000"	"0.000700118781726623"	"25"	"0"	"2.178E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"701.33710"	"1401.66692"	"1401.66702"	"-0.07"	"-0.00005"	"13/80"	"13"	"80"	"5582709.98339844"	"HCD"	"MS2"	"0"	"215.2"	"100.000"	"80.0023"	"27495"	"27495"	"27478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.0"	""	"297.8"	""	"312.1"	""	"204.9"	""	"420.1"	"427.1"	""	"370"	"49"	"32.000"	"25.000"	"0.000231297920590278"	"25"	"0"	"2.035E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"701.33716"	"1401.66704"	"1401.66702"	"0.02"	"0.00001"	"13/80"	"13"	"80"	"1609765.91333008"	"HCD"	"MS2"	"4.454276"	"70.3"	"100.000"	"79.6958"	"27370"	"27370"	"27353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.1"	""	"97.3"	""	"111.1"	""	"75.3"	"1.5"	"131.3"	"134.4"	""	"370"	"49"	"32.000"	"25.000"	"0.000228124394147348"	""	"0"	"1.415E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"701.33716"	"1401.66704"	"1401.66702"	"0.02"	"0.00001"	"9/80"	"9"	"80"	"6159017.78900146"	"HCD"	"MS2"	"0"	"227.4"	"100.000"	"80.4026"	"27685"	"27685"	"27668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"391.1"	""	"318.9"	""	"325.7"	""	"208.9"	""	"453.4"	"459.1"	""	"370"	"50"	"32.000"	"25.000"	"0.000207573414045863"	"25"	"0"	"2.876E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"701.33728"	"1401.66728"	"1401.66702"	"0.19"	"0.00013"	"13/80"	"13"	"80"	"2366023.90698242"	"HCD"	"MS2"	"3.282455"	"98.4"	"100.000"	"80.7137"	"27812"	"27812"	"27795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.9"	""	"131.2"	""	"139.4"	""	"110.0"	""	"193.7"	"204.5"	""	"370"	"47"	"32.000"	"25.000"	"0.000392800225470041"	"25"	"0"	"1.21E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"701.33728"	"1401.66728"	"1401.66702"	"0.19"	"0.00013"	"9/80"	"9"	"80"	"5973519.8026123"	"HCD"	"MS2"	"0"	"236.1"	"100.000"	"80.1238"	"27572"	"27572"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"404.7"	""	"334.5"	""	"350.8"	""	"232.4"	"1.1"	"457.4"	"456.3"	""	"370"	"51"	"32.000"	"25.000"	"0.000153876297653994"	""	"0"	"6.503E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAMSDAYDR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"701.33752"	"1401.66777"	"1401.66702"	"0.54"	"0.00038"	"6/80"	"6"	"80"	"342277.003356934"	"HCD"	"MS2"	"12.46275"	"21.2"	"100.000"	"81.0181"	"27935"	"27935"	"27916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.3"	""	"23.9"	""	"28.1"	""	"25.4"	""	"38.1"	"42.6"	""	"369"	"31"	"32.000"	"25.000"	"0.014655355930663"	"21"	"0.00192"	"0.01618"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"701.35486"	"1401.70244"	"1401.70340"	"-0.69"	"-0.00048"	"7/80"	"7"	"80"	"851220.886169434"	"HCD"	"MS2"	"2.814286"	"50.0"	"100.000"	"90.3133"	"31646"	"31646"	"31632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.9"	""	"68.2"	""	"72.5"	""	"61.7"	""	"110.6"	"102.1"	""	"582"	"38"	"34.000"	"27.000"	"0.00450705636103532"	"17"	"0"	"0.0001627"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"701.35529"	"1401.70329"	"1401.70340"	"-0.08"	"-0.00005"	"7/80"	"7"	"80"	"3765343.59039307"	"HCD"	"MS2"	"0"	"183.8"	"100.000"	"89.9087"	"31522"	"31522"	"31509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.7"	""	"278.7"	""	"284.3"	""	"211.8"	"2.2"	"337.0"	"386.7"	""	"586"	"43"	"34.000"	"27.000"	"0.00159172347127283"	"17"	"0"	"0.000344"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"701.35535"	"1401.70342"	"1401.70340"	"0.01"	"0.00001"	"7/80"	"7"	"80"	"790629.8203125"	"HCD"	"MS2"	"2.468743"	"49.4"	"100.000"	"89.7298"	"31410"	"31410"	"31397"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.0"	""	"76.2"	""	"85.1"	""	"51.7"	"0.0"	"89.1"	"95.2"	""	"587"	"44"	"34.000"	"27.000"	"0.00123483265430834"	"17"	"0"	"9.022E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"701.35541"	"1401.70354"	"1401.70340"	"0.10"	"0.00007"	"6/80"	"6"	"80"	"800062.362548828"	"HCD"	"MS2"	"0"	"50.2"	"100.000"	"89.6364"	"31413"	"31413"	"31398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.0"	""	"85.9"	""	"74.8"	""	"57.7"	"1.6"	"89.8"	"93.9"	""	"586"	"37"	"34.000"	"27.000"	"0.00622110627366065"	"16"	"0"	"0.0003701"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"701.35541"	"1401.70354"	"1401.70340"	"0.10"	"0.00007"	"6/80"	"6"	"80"	"1164080.57354736"	"HCD"	"MS2"	"1.498888"	"68.3"	"100.000"	"90.2036"	"31640"	"31640"	"31625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.7"	""	"97.8"	""	"106.5"	""	"82.3"	"0.0"	"133.9"	"142.1"	""	"586"	"39"	"34.000"	"27.000"	"0.00334863352093403"	"18"	"0"	"0.0001945"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVMQEEFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"701.35571"	"1401.70415"	"1401.70340"	"0.53"	"0.00037"	"7/80"	"7"	"80"	"3525273.21624756"	"HCD"	"MS2"	"0.6016801"	"184.0"	"100.000"	"90.0391"	"31536"	"31536"	"31523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"270.5"	""	"270.4"	""	"302.7"	""	"187.4"	""	"345.4"	"368.0"	""	"594"	"41"	"34.000"	"27.000"	"0.00253954813726751"	"17"	"0"	"0.0003965"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"701.38550"	"1401.76372"	"1401.76660"	"-2.06"	"-0.00144"	"12/54"	"12"	"54"	"1152995.74212646"	"HCD"	"MS2"	"7.629275"	"107.7"	"100.000"	"75.6447"	"25729"	"25729"	"25707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.4"	""	"156.1"	""	"156.8"	""	"157.6"	""	"186.1"	"223.3"	""	"834"	"29"	"36.000"	"29.000"	"0.0569031167957581"	"22"	"0.002189"	"0.02106"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"467.92624"	"1401.76416"	"1401.76660"	"-1.74"	"-0.00081"	"5/54"	"5"	"54"	"996211.627624512"	"HCD"	"MS2"	"12.4917"	"40.4"	"100.000"	"75.7805"	"25784"	"25784"	"25759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.8"	""	"57.2"	""	"52.1"	""	"65.5"	""	"74.3"	"84.3"	""	"824"	"22"	"36.000"	"29.000"	"0.254622756857027"	"21"	"0.008893"	"0.114"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"701.38641"	"1401.76555"	"1401.76660"	"-0.75"	"-0.00053"	"12/54"	"12"	"54"	"3901376.82312012"	"HCD"	"MS2"	"4.246386"	"329.0"	"100.000"	"76.2351"	"25969"	"25969"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"426.6"	""	"400.2"	""	"483.4"	""	"510.2"	""	"565.8"	"738.1"	""	"819"	"31"	"36.000"	"29.000"	"0.0332854096369199"	"23"	"0.002834"	"0.0302"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"701.38654"	"1401.76579"	"1401.76660"	"-0.58"	"-0.00040"	"12/54"	"12"	"54"	"1492752.62054443"	"HCD"	"MS2"	"8.598105"	"137.7"	"100.000"	"75.7772"	"25814"	"25814"	"25793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.9"	""	"194.4"	""	"194.9"	""	"208.5"	""	"234.4"	"278.0"	""	"819"	"30"	"36.000"	"29.000"	"0.0371752507107967"	"23"	"0.001718"	"0.01519"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"467.92679"	"1401.76581"	"1401.76660"	"-0.56"	"-0.00026"	"7/54"	"7"	"54"	"1960480.44433594"	"HCD"	"MS2"	"9.749008"	"74.4"	"100.000"	"76.0941"	"25911"	"25911"	"25893"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.7"	""	"93.6"	""	"102.3"	""	"122.4"	""	"128.8"	"162.4"	""	"819"	"17"	"36.000"	"29.000"	"0.759021199788365"	"20"	"0.008893"	"0.1141"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"467.92685"	"1401.76599"	"1401.76660"	"-0.43"	"-0.00020"	"7/54"	"7"	"54"	"1577228.57562256"	"HCD"	"MS2"	"16.55206"	"59.5"	"100.000"	"75.9360"	"25879"	"25879"	"25849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"76.4"	""	"90.5"	""	"90.0"	""	"99.3"	"121.3"	""	"832"	"17"	"36.000"	"29.000"	"0.790848564448092"	"20"	"0.008893"	"0.1138"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"701.38678"	"1401.76628"	"1401.76660"	"-0.23"	"-0.00016"	"5/54"	"5"	"54"	"3515508.02563477"	"HCD"	"MS2"	"5.092691"	"303.2"	"100.000"	"76.3399"	"26043"	"26043"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"389.7"	""	"369.7"	""	"443.3"	""	"475.2"	""	"514.2"	"686.0"	""	"829"	"31"	"36.000"	"29.000"	"0.02961587271583"	"22"	"0.002588"	"0.02711"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"701.38696"	"1401.76665"	"1401.76660"	"0.03"	"0.00002"	"12/54"	"12"	"54"	"7124929.45373535"	"HCD"	"MS2"	"0"	"579.4"	"100.000"	"75.9422"	"25850"	"25850"	"25833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"773.9"	""	"758.1"	""	"822.5"	""	"939.7"	""	"988.2"	"1212.7"	""	"820"	"31"	"36.000"	"29.000"	"0.0323432648223607"	"24"	"0.003818"	"0.04148"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEEYEK"	"[R].vFEEYEk.[I]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"701.38696"	"1401.76665"	"1401.76660"	"0.03"	"0.00002"	"5/54"	"5"	"54"	"8042132.78759766"	"HCD"	"MS2"	"1.843806"	"684.9"	"100.000"	"76.0607"	"25930"	"25930"	"25913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"918.5"	""	"907.1"	""	"964.3"	""	"1094.3"	""	"1158.5"	"1449.4"	""	"820"	"32"	"36.000"	"29.000"	"0.0286935218360932"	"23"	"0.00307"	"0.03298"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSVVVSGTPIR"	"[R].aSSVVVSGTPIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P25093"	"Fumarylacetoacetase OS=Rattus norvegicus OX=10116 GN=Fah PE=1 SV=1"	"P25093"	"Fumarylacetoacetase OS=Rattus norvegicus OX=10116 GN=Fah PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"701.41608"	"1401.82488"	"1401.82629"	"-1.01"	"-0.00071"	"12/102"	"12"	"102"	"756364.805297852"	"HCD"	"MS2"	"15.38317"	"43.7"	"100.000"	"54.4911"	"17180"	"17180"	"17157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.7"	""	"58.9"	""	"71.8"	""	"69.9"	"0.0"	"74.6"	"79.9"	""	"800"	"46"	"36.000"	"29.000"	"0.00104006382526611"	"24"	"0"	"5.48E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSVVVSGTPIR"	"[R].aSSVVVSGTPIR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P25093"	"Fumarylacetoacetase OS=Rattus norvegicus OX=10116 GN=Fah PE=1 SV=1"	"P25093"	"Fumarylacetoacetase OS=Rattus norvegicus OX=10116 GN=Fah PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"701.41620"	"1401.82512"	"1401.82629"	"-0.84"	"-0.00059"	"13/102"	"13"	"102"	"637537.732055664"	"HCD"	"MS2"	"13.54282"	"39.2"	"100.000"	"54.9395"	"17329"	"17329"	"17303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	""	"50.3"	""	"60.2"	""	"57.6"	"2.0"	"72.3"	"68.9"	""	"800"	"35"	"36.000"	"29.000"	"0.0120243052105129"	"21"	"0"	"2.303E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALTDNSLVAR"	"[R].iALTDNSLVAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"701.41663"	"1401.82598"	"1401.82629"	"-0.23"	"-0.00016"	"6/96"	"6"	"96"	"451313.174621582"	"HCD"	"MS2"	"10.09985"	"20.1"	"100.000"	"88.7001"	"30997"	"30997"	"30982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"26.3"	""	"26.2"	""	"31.6"	"0.4"	"39.8"	"37.4"	""	"800"	"44"	"36.000"	"29.000"	"0.00173005532414004"	"22"	"0"	"4.127E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IALTDNSLVAR"	"[R].iALTDNSLVAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"P05426"	"60S ribosomal protein L7 OS=Rattus norvegicus OX=10116 GN=Rpl7 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"701.41699"	"1401.82671"	"1401.82629"	"0.29"	"0.00021"	"8/96"	"8"	"96"	"333425.926452637"	"HCD"	"MS2"	"16.56869"	"23.0"	"100.000"	"88.6389"	"31012"	"31012"	"30991"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"33.9"	""	"33.6"	""	"39.1"	""	"35.9"	"44.6"	""	"800"	"60"	"36.000"	"29.000"	"4.20784749529289E-05"	"22"	"0"	"5.356E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIDEVPSR"	"[R].kIDEVPSR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"467.95294"	"1401.84427"	"1401.84659"	"-1.65"	"-0.00077"	"6/78"	"6"	"78"	"3260440.64990234"	"HCD"	"MS2"	"48.09846"	"193.0"	"100.000"	"36.0346"	"9655"	"9655"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.1"	""	"229.8"	""	"255.9"	""	"278.4"	""	"446.8"	"362.3"	""	"693"	"9"	"35.000"	"28.000"	"4.62065176244592"	"18"	"0.00307"	"0.03308"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KIDEVPSR"	"[R].kIDEVPSR.[A]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"Q5BJT7"	"Coiled-coil domain-containing protein 93 OS=Rattus norvegicus OX=10116 GN=Ccdc93 PE=1 SV=1"	"1"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"467.95316"	"1401.84491"	"1401.84659"	"-1.19"	"-0.00056"	"6/78"	"6"	"78"	"3420729.18267822"	"HCD"	"MS2"	"51.65018"	"203.6"	"100.000"	"35.9111"	"9642"	"9642"	"9617"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.2"	""	"255.3"	""	"271.3"	""	"297.2"	""	"450.6"	"379.6"	""	"667"	"7"	"35.000"	"28.000"	"7.41473848532243"	"18"	"0.004392"	"0.05181"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALTGGYYDTR"	"[R].gALTGGYYDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"701.86035"	"1402.71343"	"1402.71641"	"-2.13"	"-0.00149"	"4/92"	"4"	"92"	"274525.074707031"	"HCD"	"MS2"	"22.67864"	"23.2"	"100.000"	"51.8852"	"16083"	"16083"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.7"	""	"25.3"	""	"28.6"	""	"36.1"	"0.3"	"51.4"	"49.0"	""	"597"	"10"	"34.000"	"27.000"	"2.87702963551755"	"19"	"0.004959"	"0.06274"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALTGGYYDTR"	"[R].gALTGGYYDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"701.86151"	"1402.71575"	"1402.71641"	"-0.47"	"-0.00033"	"8/92"	"8"	"92"	"426832.528259277"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"51.5825"	"15961"	"15961"	"15942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"32.0"	""	"37.2"	""	"51.3"	""	"69.3"	"67.1"	""	"633"	"33"	"35.000"	"28.000"	"0.0154658471732007"	"24"	"9.9E-05"	"0.0007674"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALTGGYYDTR"	"[R].gALTGGYYDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"701.86169"	"1402.71611"	"1402.71641"	"-0.21"	"-0.00015"	"8/92"	"8"	"92"	"461021.449584961"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"51.2308"	"15855"	"15855"	"15839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.8"	""	"39.6"	""	"37.9"	""	"52.9"	""	"74.0"	"77.9"	""	"635"	"47"	"35.000"	"28.000"	"0.00058175982910286"	"27"	"0"	"4.331E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALTGGYYDTR"	"[R].gALTGGYYDTR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"701.86182"	"1402.71636"	"1402.71641"	"-0.04"	"-0.00003"	"7/92"	"7"	"92"	"315582.208312988"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"51.5330"	"15974"	"15974"	"15951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.9"	""	"32.6"	""	"32.0"	""	"39.3"	""	"55.8"	"58.0"	""	"627"	"30"	"34.000"	"27.000"	"0.03135"	"21"	"9.9E-05"	"0.000484"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGEDAK"	"[K].dFYGEDAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"701.86566"	"1402.72405"	"1402.72547"	"-1.01"	"-0.00071"	"6/66"	"6"	"66"	"489830.124938965"	"HCD"	"MS2"	"25.51631"	"43.0"	"100.000"	"56.9181"	"18161"	"18161"	"18137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.3"	""	"51.3"	""	"50.3"	""	"65.8"	""	"77.6"	"96.8"	""	"648"	"21"	"35.000"	"28.000"	"0.284803295453207"	"24"	"0.0001991"	"0.004506"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGEDAK"	"[K].dFYGEDAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.86584"	"1402.72441"	"1402.72547"	"-0.75"	"-0.00053"	"8/66"	"8"	"66"	"543463.222839355"	"HCD"	"MS2"	"21.18905"	"58.5"	"100.000"	"57.3438"	"18299"	"18299"	"18280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"74.0"	""	"64.0"	""	"93.5"	"0.2"	"109.1"	"143.8"	""	"641"	"12"	"35.000"	"28.000"	"1.9134980935012"	"13"	"0.009005"	"0.1165"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEESFSSK"	"[R].mEESFSSk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"701.86749"	"1402.72771"	"1402.72884"	"-0.80"	"-0.00056"	"6/66"	"6"	"66"	"446009.434631348"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"55.1598"	"17453"	"17453"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"48.4"	""	"50.9"	""	"64.5"	""	"98.9"	"103.6"	""	"677"	"26"	"35.000"	"28.000"	"0.0832834434003972"	"21"	"0.0001686"	"0.00153"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGEDAK"	"[K].dFYGEDAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"701.86749"	"1402.72771"	"1402.72547"	"1.60"	"0.00112"	"11/66"	"11"	"66"	"669364.536560059"	"HCD"	"MS2"	"33.85765"	"61.3"	"100.000"	"57.2399"	"18292"	"18292"	"18263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.5"	""	"72.8"	""	"72.7"	""	"90.0"	""	"98.5"	"162.4"	""	"677"	"12"	"35.000"	"28.000"	"2.23130363540203"	"19"	"0.002525"	"0.02489"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEESFSSK"	"[R].mEESFSSk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.86804"	"1402.72881"	"1402.72884"	"-0.02"	"-0.00002"	"10/66"	"10"	"66"	"412196.656616211"	"HCD"	"MS2"	"10.86336"	"44.7"	"100.000"	"55.5325"	"17571"	"17571"	"17544"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.2"	""	"55.2"	""	"58.8"	""	"61.7"	"0.1"	"97.3"	"98.8"	""	"701"	"14"	"35.000"	"28.000"	"1.26674156855184"	"13"	"0.002189"	"0.02011"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"701.88995"	"1402.77263"	"1402.77795"	"-3.79"	"-0.00266"	"7/86"	"7"	"86"	"422133.315856934"	"HCD"	"MS2"	"72.76567"	"12.5"	"100.000"	"104.7564"	"37480"	"37480"	"37463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.4"	""	"17.0"	""	"18.4"	""	"17.1"	""	"23.7"	"28.4"	""	"998"	"35"	"36.000"	"29.000"	"0.0141286460590389"	"23"	"0.001999"	"0.0175"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7045"	"0.0000"	"1"	"1"	"1"	"468.26263"	"1402.77335"	"1402.77392"	"-0.41"	"-0.00019"	"13/98"	"13"	"98"	"597619.389709473"	"HCD"	"MS2"	"45.07069"	"18.0"	"100.000"	"91.4662"	"32148"	"32148"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"17.5"	""	"24.7"	""	"30.1"	""	"39.6"	"37.8"	""	"994"	"44"	"36.000"	"29.000"	"0.00208620215043531"	"28"	"0"	"8.888E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"701.89063"	"1402.77397"	"1402.77392"	"0.03"	"0.00002"	"10/98"	"10"	"98"	"1399383.42095947"	"HCD"	"MS2"	"3.099408"	"70.9"	"100.000"	"91.5518"	"32183"	"32183"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.7"	""	"78.5"	""	"82.4"	""	"106.5"	""	"135.5"	"175.9"	""	"1000"	"58"	"36.000"	"30.000"	"8.56978653754213E-05"	"29"	"0"	"2.793E-07"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"701.89075"	"1402.77422"	"1402.77392"	"0.21"	"0.00015"	"9/98"	"9"	"98"	"1020601.7088623"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"91.6815"	"32199"	"32199"	"32180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.3"	""	"64.1"	""	"68.3"	""	"92.9"	""	"114.9"	"130.5"	""	"1000"	"54"	"36.000"	"30.000"	"0.000193183488527034"	""	"0"	"1.318E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6792"	"0.0000"	"1"	"1"	"1"	"701.89075"	"1402.77422"	"1402.77392"	"0.21"	"0.00015"	"9/98"	"9"	"98"	"2152210.57446289"	"HCD"	"MS2"	"27.21371"	"114.2"	"100.000"	"91.3747"	"32075"	"32075"	"32058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.6"	""	"112.1"	""	"114.6"	""	"181.1"	""	"257.3"	"289.4"	""	"1000"	"53"	"36.000"	"30.000"	"0.000230128286790678"	""	"0"	"1.925E-06"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTGAEALLER"	"[K].dVTGAEALLER.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6275"	"0.0000"	"1"	"1"	"1"	"701.89099"	"1402.77471"	"1402.77392"	"0.56"	"0.00039"	"9/98"	"9"	"98"	"1971759.04901123"	"HCD"	"MS2"	"32.20131"	"110.5"	"100.000"	"91.2794"	"32073"	"32073"	"32057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.2"	""	"112.4"	""	"100.0"	""	"202.0"	""	"240.0"	"279.3"	""	"998"	"51"	"36.000"	"29.000"	"0.000373336580755066"	""	"0"	"5.665E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"701.89185"	"1402.77641"	"1402.77795"	"-1.09"	"-0.00077"	"8/86"	"8"	"86"	"411249.038818359"	"HCD"	"MS2"	"47.03079"	"12.1"	"100.000"	"104.8066"	"37520"	"37520"	"37510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"14.6"	""	"15.3"	""	"19.5"	""	"22.8"	"25.9"	""	"985"	"66"	"36.000"	"29.000"	"1.1492280956734E-05"	"25"	"0.0001991"	"0.003065"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.89215"	"1402.77703"	"1402.77795"	"-0.66"	"-0.00046"	"8/86"	"8"	"86"	"699071.312316895"	"HCD"	"MS2"	"32.01065"	"32.9"	"100.000"	"103.7405"	"37076"	"37076"	"37058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"38.0"	""	"48.3"	""	"42.7"	""	"47.8"	"95.7"	""	"957"	"17"	"36.000"	"29.000"	"0.876762451104625"	"14"	"0.006237"	"0.07605"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8953"	"0.0000"	"1"	"1"	"1"	"701.89215"	"1402.77703"	"1402.77795"	"-0.66"	"-0.00046"	"9/86"	"9"	"86"	"913414.041687012"	"HCD"	"MS2"	"42.01108"	"31.4"	"100.000"	"103.3406"	"36931"	"36931"	"36911"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.3"	""	"41.3"	""	"50.9"	""	"42.4"	""	"48.4"	"78.6"	""	"957"	"86"	"36.000"	"29.000"	"1.30281257591528E-07"	"27"	"0"	"0.0001737"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9012"	"0.0000"	"1"	"1"	"1"	"701.89215"	"1402.77703"	"1402.77795"	"-0.66"	"-0.00046"	"9/86"	"9"	"86"	"1134875.54815674"	"HCD"	"MS2"	"30.55779"	"38.8"	"100.000"	"103.1995"	"36857"	"36857"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.4"	""	"42.5"	""	"59.1"	""	"58.1"	"0.3"	"61.0"	"98.6"	""	"957"	"81"	"36.000"	"29.000"	"3.39532961970482E-07"	"26"	"9.9E-05"	"0.001022"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"701.89233"	"1402.77739"	"1402.77795"	"-0.40"	"-0.00028"	"9/86"	"9"	"86"	"889783.497619629"	"HCD"	"MS2"	"20.80895"	"27.7"	"100.000"	"104.2579"	"37302"	"37302"	"37288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"40.1"	""	"43.6"	""	"36.5"	""	"48.8"	"61.5"	""	"975"	"82"	"36.000"	"29.000"	"3.19870817322667E-07"	"26"	"9.9E-05"	"0.0007336"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.9103"	"0.0000"	"1"	"1"	"1"	"701.89240"	"1402.77751"	"1402.77795"	"-0.31"	"-0.00022"	"9/86"	"9"	"86"	"1141584.92822266"	"HCD"	"MS2"	"14.33702"	"34.6"	"100.000"	"103.7916"	"37097"	"37097"	"37082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.8"	""	"51.4"	""	"55.8"	""	"45.4"	""	"57.5"	"81.9"	""	"978"	"78"	"36.000"	"29.000"	"7.60867193854881E-07"	"25"	"0.0001686"	"0.001922"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8902"	"0.0000"	"1"	"1"	"1"	"701.89252"	"1402.77776"	"1402.77795"	"-0.14"	"-0.00010"	"9/86"	"9"	"86"	"824445.131225586"	"HCD"	"MS2"	"23.49593"	"26.8"	"100.000"	"104.1083"	"37224"	"37224"	"37204"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"33.0"	""	"46.4"	""	"44.4"	"0.1"	"41.5"	"55.6"	""	"973"	"82"	"36.000"	"29.000"	"3.28157885475039E-07"	"26"	"0"	"9.76E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8902"	"0.0000"	"1"	"1"	"1"	"701.89252"	"1402.77776"	"1402.77795"	"-0.14"	"-0.00010"	"9/86"	"9"	"86"	"1395225.81518555"	"HCD"	"MS2"	"17.85852"	"43.4"	"100.000"	"103.5035"	"36980"	"36980"	"36962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.9"	""	"70.6"	""	"74.1"	""	"53.7"	"1.2"	"74.7"	"88.3"	""	"973"	"82"	"36.000"	"29.000"	"2.95857678122096E-07"	"26"	"0.0001686"	"0.001917"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8902"	"0.0000"	"1"	"1"	"1"	"701.89288"	"1402.77849"	"1402.77795"	"0.39"	"0.00027"	"9/86"	"9"	"86"	"1367380.79174805"	"HCD"	"MS2"	"18.72302"	"45.8"	"100.000"	"103.6519"	"37056"	"37056"	"37040"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"71.5"	""	"73.0"	""	"63.7"	"1.9"	"77.6"	"99.0"	""	"975"	"82"	"36.000"	"29.000"	"3.04070732297679E-07"	"26"	"0"	"0.000184"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVPPTYADLGK"	"[M].aVPPTYADLGk.[S]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"Q9Z2L0"	"Voltage-dependent anion-selective channel protein 1 OS=Rattus norvegicus OX=10116 GN=Vdac1 PE=1 SV=4"	"0"	"2"	"2"	"0.8851"	"0.0000"	"1"	"1"	"1"	"701.89294"	"1402.77861"	"1402.77795"	"0.47"	"0.00033"	"9/86"	"9"	"86"	"1226419.3237915"	"HCD"	"MS2"	"17.66307"	"35.9"	"100.000"	"103.9623"	"37183"	"37183"	"37166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.2"	""	"50.9"	""	"58.6"	""	"50.1"	"2.7"	"61.4"	"71.4"	""	"979"	"87"	"36.000"	"29.000"	"1.07090931492331E-07"	"28"	"9.9E-05"	"0.0005613"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"468.26718"	"1402.78699"	"1402.78918"	"-1.56"	"-0.00073"	"10/80"	"10"	"80"	"938630.405822754"	"HCD"	"MS2"	"3.361923"	"14.6"	"100.000"	"110.1198"	"39555"	"39555"	"39533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"16.3"	""	"21.9"	""	"28.0"	""	"26.1"	"27.5"	""	"1040"	"36"	"37.000"	"30.000"	"0.0119674974505242"	"15"	"0.0001686"	"0.00136"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"468.26727"	"1402.78727"	"1402.78918"	"-1.37"	"-0.00064"	"11/80"	"11"	"80"	"1869498.4642334"	"HCD"	"MS2"	"6.955415"	"22.9"	"100.000"	"110.3138"	"39647"	"39647"	"39628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.7"	""	"29.2"	""	"30.6"	""	"39.1"	""	"46.1"	"39.5"	""	"1037"	"53"	"37.000"	"30.000"	"0.000283627776760524"	"19"	"0"	"5.918E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.89838"	"1402.78948"	"1402.78918"	"0.21"	"0.00015"	"8/80"	"8"	"80"	"2739125.30999756"	"HCD"	"MS2"	"2.365012"	"138.0"	"100.000"	"110.2722"	"39630"	"39630"	"39613"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.2"	""	"132.2"	""	"375.6"	""	"195.6"	""	"226.7"	"226.6"	""	"1002"	"58"	"36.000"	"30.000"	"7.92205267674462E-05"	"16"	"0"	"5.821E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFDALLINPR"	"[K].dFDALLINPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"701.89844"	"1402.78960"	"1402.78918"	"0.30"	"0.00021"	"8/80"	"8"	"80"	"2548781.14172363"	"HCD"	"MS2"	"2.395397"	"133.4"	"100.000"	"110.1105"	"39551"	"39551"	"39533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.9"	""	"135.8"	""	"339.8"	""	"191.6"	"7.4"	"221.8"	"212.5"	""	"1002"	"49"	"36.000"	"30.000"	"0.000648392116566443"	"16"	"0"	"3.593E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"0.4483"	"0.0000"	"1"	"1"	"1"	"468.28052"	"1402.82700"	"1402.83060"	"-2.57"	"-0.00120"	"8/68"	"8"	"68"	"1137268.11975098"	"HCD"	"MS2"	"29.62041"	"55.5"	"100.000"	"50.7645"	"15665"	"15665"	"15644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.1"	""	"68.9"	""	"57.1"	""	"99.8"	""	"112.4"	"118.1"	""	"850"	"29"	"36.000"	"29.000"	"0.056414264453514"	""	"0.0005778"	"0.00702"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"701.91779"	"1402.82829"	"1402.83060"	"-1.64"	"-0.00115"	"7/68"	"7"	"68"	"1102866.1585083"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"50.5070"	"15561"	"15561"	"15539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.2"	""	"94.3"	""	"104.2"	""	"201.2"	"0.8"	"172.6"	"178.3"	""	"828"	"40"	"36.000"	"29.000"	"0.00402717350643664"	""	"0.0001686"	"0.00112"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPTDGSVK"	"[K].gALPTDGSVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80Z70"	"Protein sel-1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Sel1l PE=1 SV=2"	"Q80Z70"	"Protein sel-1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Sel1l PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"701.91809"	"1402.82891"	"1402.83060"	"-1.21"	"-0.00085"	"7/78"	"7"	"78"	"387633.415893555"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"52.8114"	"16495"	"16495"	"16466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.2"	""	"37.6"	""	"36.8"	""	"63.3"	""	"64.6"	"62.4"	""	"791"	"10"	"35.000"	"28.000"	"3.73376076571083"	"17"	"0.008255"	"0.1048"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPTDGSVK"	"[K].gALPTDGSVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80Z70"	"Protein sel-1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Sel1l PE=1 SV=2"	"Q80Z70"	"Protein sel-1 homolog 1 OS=Rattus norvegicus OX=10116 GN=Sel1l PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"701.91846"	"1402.82964"	"1402.83060"	"-0.69"	"-0.00048"	"9/78"	"9"	"78"	"375912.17791748"	"HCD"	"MS2"	"28.63361"	"33.3"	"100.000"	"53.1358"	"16593"	"16593"	"16570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.6"	""	"38.9"	""	"45.8"	""	"57.9"	"0.3"	"61.5"	"64.2"	""	"798"	"14"	"36.000"	"29.000"	"1.59945820333294"	"16"	"0.004213"	"0.04686"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6098"	"0.0000"	"1"	"1"	"1"	"701.91870"	"1402.83013"	"1402.83060"	"-0.34"	"-0.00024"	"7/68"	"7"	"68"	"1082009.75811768"	"HCD"	"MS2"	"14.02094"	"95.1"	"100.000"	"50.8371"	"15661"	"15661"	"15637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.7"	""	"103.6"	""	"106.2"	""	"195.9"	""	"154.7"	"192.0"	""	"824"	"41"	"36.000"	"29.000"	"0.00292346040400916"	""	"9.9E-05"	"0.00088"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVEQLQK"	"[K].eAVEQLQk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"701.91913"	"1402.83098"	"1402.83060"	"0.27"	"0.00019"	"12/68"	"12"	"68"	"801142.214538574"	"HCD"	"MS2"	"44.45011"	"72.2"	"100.000"	"51.1407"	"15785"	"15785"	"15763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.6"	""	"72.1"	""	"78.1"	""	"139.4"	""	"148.5"	"151.4"	""	"821"	"30"	"36.000"	"29.000"	"0.0436830708981081"	"24"	"9.9E-05"	"0.0008128"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQVQETK"	"[R].lVQVQETk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"701.93634"	"1402.86540"	"1402.86699"	"-1.13"	"-0.00079"	"14/68"	"14"	"68"	"1229340.81585693"	"HCD"	"MS2"	"30.0885"	"94.8"	"100.000"	"58.7265"	"18863"	"18863"	"18842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.0"	""	"142.7"	""	"70.7"	""	"179.7"	"1.0"	"183.6"	"140.8"	""	"624"	"48"	"34.000"	"27.000"	"0.000483230785100694"	""	"9.9E-05"	"0.0004997"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQVQETK"	"[R].lVQVQETk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6042"	"0.0000"	"1"	"1"	"1"	"701.93707"	"1402.86687"	"1402.86699"	"-0.08"	"-0.00006"	"14/68"	"14"	"68"	"1176298.72723389"	"HCD"	"MS2"	"26.0995"	"92.6"	"100.000"	"58.4870"	"18801"	"18801"	"18779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.7"	""	"144.4"	""	"61.9"	""	"173.2"	""	"194.0"	"145.4"	""	"626"	"48"	"34.000"	"27.000"	"0.000478128176228517"	""	"9.9E-05"	"0.0006802"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSSPTVNTTLR"	"[R].vSSPTVNTTLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"702.40558"	"1403.80388"	"1403.80556"	"-1.20"	"-0.00084"	"8/102"	"8"	"102"	"1790785.92248535"	"HCD"	"MS2"	"4.770813"	"92.0"	"100.000"	"49.4117"	"15114"	"15114"	"15095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.4"	""	"137.1"	""	"139.8"	""	"158.1"	""	"142.3"	"147.7"	""	"990"	"15"	"36.000"	"29.000"	"1.50523808770976"	"27"	"0.003568"	"0.03957"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSTTIEAVKR"	"[M].aGSTTIEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"Q63610"	"Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2"	"1"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"702.40594"	"1403.80461"	"1403.80556"	"-0.67"	"-0.00047"	"7/90"	"7"	"90"	"2019822.97241211"	"HCD"	"MS2"	"0"	"94.0"	"100.000"	"49.8087"	"15241"	"15241"	"15219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.1"	""	"147.9"	""	"169.4"	""	"145.7"	""	"130.2"	"139.5"	""	"1002"	"19"	"36.000"	"30.000"	"0.701193248608881"	"25"	"0.001453"	"0.01174"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVQNLSK"	"[K].qEVQNLSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"702.41626"	"1403.82524"	"1403.82585"	"-0.43"	"-0.00030"	"14/80"	"14"	"80"	"772081.493896484"	"HCD"	"MS2"	"0"	"70.4"	"100.000"	"42.4831"	"12301"	"12301"	"12271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.3"	""	"81.1"	""	"98.2"	""	"120.8"	"2.6"	"122.3"	"133.0"	""	"941"	"45"	"36.000"	"29.000"	"0.0014573357802814"	""	"0"	"0.0002045"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVQNLSK"	"[K].qEVQNLSk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"702.41632"	"1403.82536"	"1403.82585"	"-0.35"	"-0.00024"	"7/80"	"7"	"80"	"779576.096801758"	"HCD"	"MS2"	"0"	"72.8"	"100.000"	"42.7087"	"12359"	"12359"	"12330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.9"	""	"82.2"	""	"86.1"	""	"114.7"	""	"135.8"	"158.2"	""	"941"	"27"	"36.000"	"29.000"	"0.10059111631108"	"28"	"0.0001991"	"0.002745"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQAGQDLK"	"[K].sVQAGQDLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64270"	"Translation initiation factor eIF-2B subunit alpha OS=Rattus norvegicus OX=10116 GN=Eif2b1 PE=2 SV=1"	"Q64270"	"Translation initiation factor eIF-2B subunit alpha OS=Rattus norvegicus OX=10116 GN=Eif2b1 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"702.41675"	"1403.82622"	"1403.82585"	"0.26"	"0.00018"	"8/88"	"8"	"88"	"392751.862670898"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"43.0168"	"12485"	"12485"	"12457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.7"	""	"39.7"	""	"49.9"	""	"64.2"	"0.3"	"81.6"	"77.4"	""	"941"	"44"	"36.000"	"29.000"	"0.0019255714040297"	"27"	"0"	"0.0002996"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQAGQDLK"	"[K].sVQAGQDLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64270"	"Translation initiation factor eIF-2B subunit alpha OS=Rattus norvegicus OX=10116 GN=Eif2b1 PE=2 SV=1"	"Q64270"	"Translation initiation factor eIF-2B subunit alpha OS=Rattus norvegicus OX=10116 GN=Eif2b1 PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"702.41687"	"1403.82646"	"1403.82585"	"0.44"	"0.00031"	"8/88"	"8"	"88"	"555067.14239502"	"HCD"	"MS2"	"7.464015"	"50.4"	"100.000"	"42.8167"	"12437"	"12437"	"12414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.7"	""	"53.2"	""	"66.7"	""	"75.3"	"0.7"	"108.6"	"108.5"	""	"943"	"42"	"36.000"	"29.000"	"0.00326198302788279"	"27"	"0"	"8.863E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"702.42871"	"1403.85015"	"1403.85100"	"-0.61"	"-0.00043"	"8/70"	"8"	"70"	"995202.217590332"	"HCD"	"MS2"	"10.20902"	"75.0"	"100.000"	"89.1686"	"31187"	"31187"	"31182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.3"	""	"80.5"	""	"108.0"	""	"128.4"	"1.4"	"137.6"	"139.1"	""	"763"	"47"	"35.000"	"28.000"	"0.000755952560344644"	"28"	"0"	"6.244E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"702.42883"	"1403.85039"	"1403.85100"	"-0.44"	"-0.00031"	"11/70"	"11"	"70"	"233103.967102051"	"HCD"	"MS2"	"25.9233"	"19.6"	"100.000"	"89.4802"	"31311"	"31311"	"31297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"24.0"	""	"23.9"	""	"34.2"	""	"34.1"	"40.7"	""	"766"	"38"	"35.000"	"28.000"	"0.00657958912281356"	"24"	"0.001103"	"0.009022"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVLETVK"	"[R].eQVLETVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"702.42896"	"1403.85063"	"1403.85100"	"-0.26"	"-0.00018"	"7/78"	"7"	"78"	"577176.846313477"	"HCD"	"MS2"	"25.50007"	"44.7"	"100.000"	"67.3471"	"22393"	"22393"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.7"	""	"58.8"	""	"48.3"	""	"81.6"	"0.3"	"94.3"	"86.6"	""	"765"	"46"	"35.000"	"28.000"	"0.000892547708822484"	""	"0"	"0.0001697"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"702.42902"	"1403.85076"	"1403.85100"	"-0.18"	"-0.00012"	"7/70"	"7"	"70"	"829382.203186035"	"HCD"	"MS2"	"7.730745"	"58.8"	"100.000"	"89.1420"	"31215"	"31215"	"31201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.3"	""	"73.8"	""	"74.1"	""	"97.1"	""	"96.7"	"119.9"	""	"765"	"50"	"35.000"	"28.000"	"0.000400526669629469"	"25"	"9.9E-05"	"0.0004632"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVLETVK"	"[R].eQVLETVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"702.42914"	"1403.85100"	"1403.85100"	"0.00"	"0.00000"	"12/78"	"12"	"78"	"442880.501953125"	"HCD"	"MS2"	"14.78103"	"35.0"	"100.000"	"67.6903"	"22532"	"22532"	"22509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.1"	""	"42.7"	""	"39.2"	""	"76.4"	""	"68.5"	"63.8"	""	"765"	"40"	"35.000"	"28.000"	"0.00404232697274225"	""	"0.0001686"	"0.001072"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVLETVK"	"[R].eQVLETVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"702.42938"	"1403.85149"	"1403.85100"	"0.35"	"0.00024"	"7/78"	"7"	"78"	"596916.243164063"	"HCD"	"MS2"	"20.94394"	"46.6"	"100.000"	"67.5578"	"22447"	"22447"	"22427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.3"	""	"52.6"	""	"54.0"	""	"88.9"	""	"91.1"	"99.4"	""	"763"	"48"	"35.000"	"28.000"	"0.000624445502924709"	""	"0"	"0.0001342"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVLETVK"	"[R].eQVLETVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.5532"	"0.0000"	"1"	"1"	"1"	"702.42957"	"1403.85185"	"1403.85100"	"0.61"	"0.00043"	"14/78"	"14"	"78"	"524635.068969727"	"HCD"	"MS2"	"21.4619"	"39.6"	"100.000"	"67.2584"	"22326"	"22326"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.6"	""	"51.8"	""	"53.4"	""	"66.8"	""	"74.8"	"78.1"	""	"766"	"47"	"35.000"	"28.000"	"0.000733160019283076"	""	"0"	"0.0002518"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"702.42963"	"1403.85198"	"1403.85100"	"0.69"	"0.00049"	"7/70"	"7"	"70"	"481800.603210449"	"HCD"	"MS2"	"15.46634"	"39.5"	"100.000"	"88.8465"	"31097"	"31097"	"31068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.7"	""	"45.0"	""	"53.8"	""	"64.1"	""	"72.7"	"79.1"	""	"766"	"46"	"35.000"	"28.000"	"0.000993570695691506"	"25"	"0"	"0.0001733"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIALDGDTK"	"[R].iIALDGDTk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"702.43048"	"1403.85369"	"1403.85100"	"1.91"	"0.00134"	"8/70"	"8"	"70"	"381337.377807617"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"88.9099"	"31083"	"31083"	"31057"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.2"	""	"40.0"	""	"43.8"	""	"48.7"	""	"47.0"	"60.5"	""	"733"	"38"	"35.000"	"28.000"	"0.00529753675978382"	"23"	"9.9E-05"	"0.0004273"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.82458"	"1404.64189"	"1404.64490"	"-2.14"	"-0.00150"	"8/96"	"8"	"96"	"1093840.98217773"	"HCD"	"MS2"	"0"	"74.6"	"100.000"	"39.0998"	"10900"	"10900"	"10873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.0"	""	"117.0"	""	"126.9"	""	"65.1"	"1.3"	"122.5"	"140.7"	""	"229"	"49"	"30.000"	"23.000"	"0.000152688203982701"	"16"	"0"	"9.723E-06"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTMNSYEMR"	"[R].sGTMNSYEMR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.82562"	"1404.64397"	"1404.64490"	"-0.66"	"-0.00047"	"8/96"	"8"	"96"	"899795.666687012"	"HCD"	"MS2"	"0"	"62.2"	"100.000"	"39.0492"	"10915"	"10915"	"10890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.2"	""	"91.8"	""	"96.1"	""	"60.5"	""	"118.0"	"126.8"	""	"235"	"47"	"30.000"	"23.000"	"0.000238801948785006"	"15"	"0"	"2.666E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETYDFLFK"	"[M].aETYDFLFk.[F]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"702.86566"	"1404.72405"	"1404.72485"	"-0.57"	"-0.00040"	"5/70"	"5"	"70"	"163458.738342285"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"115.3775"	"41658"	"41658"	"41652"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"12.6"	""	"14.6"	""	"10.9"	""	"13.6"	"14.1"	""	"702"	"36"	"35.000"	"28.000"	"0.00929623548650951"	"21"	"0.0007633"	"0.007289"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AETYDFLFK"	"[M].aETYDFLFk.[F]"	"N-Term(Prot)(Acetyl); K9(TMT6plex)"	"1"	"1"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"P51146"	"Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"702.86572"	"1404.72417"	"1404.72485"	"-0.48"	"-0.00034"	"5/70"	"5"	"70"	"231934.766113281"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"115.3069"	"41624"	"41624"	"41617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"13.4"	""	"14.3"	""	"11.7"	""	"16.0"	"12.9"	""	"703"	"23"	"35.000"	"28.000"	"0.188332525115939"	"22"	"0.001615"	"0.01358"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"468.92178"	"1404.75080"	"1404.75235"	"-1.11"	"-0.00052"	"7/68"	"7"	"68"	"57025181.6721191"	"HCD"	"MS2"	"4.030758"	"396.2"	"18.288"	"48.1219"	"14594"	"14594"	"14577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"637.2"	""	"494.7"	""	"525.3"	""	"687.4"	""	"718.4"	"689.2"	""	"922"	"46"	"36.000"	"29.000"	"0.00110586197566798"	""	"9.9E-05"	"0.0007417"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"702.87915"	"1404.75102"	"1404.75235"	"-0.94"	"-0.00066"	"14/68"	"14"	"68"	"508958.001647949"	"HCD"	"MS2"	"0"	"48.5"	"100.000"	"48.2264"	"14598"	"14598"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.7"	""	"58.3"	""	"60.4"	""	"77.5"	"1.0"	"86.1"	"89.1"	""	"922"	"45"	"36.000"	"29.000"	"0.00134493385345454"	"26"	"0"	"0.0002742"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"702.87927"	"1404.75127"	"1404.75235"	"-0.77"	"-0.00054"	"6/68"	"6"	"68"	"640119.425842285"	"HCD"	"MS2"	"0"	"63.6"	"100.000"	"48.1424"	"14602"	"14602"	"14577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.5"	""	"72.7"	""	"88.1"	""	"104.1"	"3.3"	"122.0"	"128.0"	""	"914"	"20"	"36.000"	"29.000"	"0.415830365592939"	"21"	"0.0001991"	"0.005578"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6744"	"0.0000"	"1"	"1"	"1"	"468.92200"	"1404.75144"	"1404.75235"	"-0.65"	"-0.00030"	"7/68"	"7"	"68"	"65142199.2617188"	"HCD"	"MS2"	"3.878731"	"497.0"	"21.496"	"48.4237"	"14679"	"14679"	"14663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"795.8"	""	"646.3"	""	"643.4"	""	"851.0"	""	"880.8"	"892.7"	""	"913"	"43"	"36.000"	"29.000"	"0.0024515501504302"	"29"	"9.9E-05"	"0.0005281"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"702.87939"	"1404.75151"	"1404.75235"	"-0.60"	"-0.00042"	"7/68"	"7"	"68"	"610356.807983398"	"HCD"	"MS2"	"0"	"55.7"	"100.000"	"47.9291"	"14515"	"14515"	"14490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.5"	""	"68.3"	""	"73.6"	""	"84.9"	"0.1"	"96.4"	"104.2"	""	"913"	"42"	"36.000"	"29.000"	"0.00277613628083735"	"24"	"0.0001686"	"0.001229"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"468.92209"	"1404.75171"	"1404.75235"	"-0.45"	"-0.00021"	"7/68"	"7"	"68"	"10718287.0931396"	"HCD"	"MS2"	"8.932335"	"368.3"	"100.000"	"47.8118"	"14467"	"14467"	"14442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"623.8"	""	"503.1"	""	"473.7"	""	"649.3"	""	"620.6"	"619.3"	""	"944"	"43"	"36.000"	"29.000"	"0.00222301298059362"	"27"	"0"	"0.0002215"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DADFHVDK"	"[R].dADFHVDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"468.92261"	"1404.75327"	"1404.75235"	"0.65"	"0.00031"	"7/68"	"7"	"68"	"10472024.3233032"	"HCD"	"MS2"	"8.637986"	"379.8"	"100.000"	"48.1320"	"14559"	"14559"	"14541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"677.4"	""	"522.5"	""	"456.3"	""	"669.1"	"1.5"	"652.0"	"613.2"	""	"937"	"44"	"36.000"	"29.000"	"0.00172866004930116"	""	"0"	"0.00034"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IISTTNGGQER"	"[R].iISTTNGGQER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"702.88617"	"1404.76506"	"1404.76442"	"0.46"	"0.00032"	"6/104"	"6"	"104"	"225913.381652832"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"35.2132"	"9322"	"9322"	"9301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"18.5"	""	"19.5"	""	"26.2"	""	"31.6"	"34.5"	""	"970"	"20"	"36.000"	"29.000"	"0.462106139551471"	"14"	"0.0001991"	"0.004362"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFLIQASPR"	"[R].dEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"702.88715"	"1404.76702"	"1404.76845"	"-1.02"	"-0.00071"	"7/94"	"7"	"94"	"538309.87487793"	"HCD"	"MS2"	"27.35579"	"32.8"	"100.000"	"82.1367"	"28389"	"28389"	"28366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.2"	""	"26.8"	""	"34.0"	""	"66.0"	""	"78.1"	"72.0"	""	"979"	"41"	"36.000"	"29.000"	"0.00435263947191466"	"26"	"0"	"5.979E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"702.88745"	"1404.76763"	"1404.76845"	"-0.58"	"-0.00041"	"6/100"	"6"	"100"	"628784.173095703"	"HCD"	"MS2"	"16.64308"	"39.4"	"100.000"	"84.0971"	"29150"	"29150"	"29131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"33.3"	""	"44.4"	""	"82.6"	"2.3"	"78.3"	"79.6"	""	"958"	"36"	"36.000"	"29.000"	"0.0108226973393585"	"23"	"0"	"0.0001493"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"702.88745"	"1404.76763"	"1404.76845"	"-0.58"	"-0.00041"	"10/92"	"10"	"92"	"979566.336364746"	"HCD"	"MS2"	"27.72891"	"48.3"	"100.000"	"82.6327"	"28558"	"28558"	"28539"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.8"	""	"61.2"	""	"67.2"	""	"77.0"	""	"95.5"	"87.9"	""	"958"	"44"	"36.000"	"29.000"	"0.00203392771130284"	""	"0"	"3.7E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFLIQASPR"	"[R].dEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"702.88751"	"1404.76775"	"1404.76845"	"-0.50"	"-0.00035"	"8/94"	"8"	"94"	"443133.274597168"	"HCD"	"MS2"	"23.60127"	"29.9"	"100.000"	"82.0308"	"28318"	"28318"	"28295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.0"	""	"27.4"	""	"31.8"	""	"60.8"	""	"60.8"	"69.7"	""	"974"	"47"	"36.000"	"29.000"	"0.000953957355997418"	"22"	"0"	"1.291E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"1"	"702.88763"	"1404.76799"	"1404.76845"	"-0.32"	"-0.00023"	"7/100"	"7"	"100"	"539729.419921875"	"HCD"	"MS2"	"8.685559"	"32.4"	"100.000"	"83.5015"	"28910"	"28910"	"28896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.0"	""	"36.0"	""	"41.1"	""	"58.9"	""	"67.4"	"61.7"	""	"981"	"32"	"36.000"	"29.000"	"0.0338562623783639"	""	"0.0001686"	"0.001236"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"702.88763"	"1404.76799"	"1404.76845"	"-0.32"	"-0.00023"	"10/92"	"10"	"92"	"2488990.30004883"	"HCD"	"MS2"	"5.14009"	"111.7"	"100.000"	"83.2089"	"28792"	"28792"	"28775"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.4"	""	"141.1"	""	"146.7"	""	"184.3"	""	"212.0"	"227.2"	""	"981"	"61"	"36.000"	"29.000"	"3.52078099868603E-05"	""	"0"	"2.832E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFLIQASPR"	"[R].dEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"702.88770"	"1404.76811"	"1404.76845"	"-0.24"	"-0.00017"	"8/94"	"8"	"94"	"811643.66015625"	"HCD"	"MS2"	"13.51149"	"42.3"	"100.000"	"82.4420"	"28509"	"28509"	"28490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"43.1"	""	"42.2"	""	"78.2"	""	"99.3"	"96.0"	""	"981"	"49"	"36.000"	"29.000"	"0.000645117780190293"	"26"	"0"	"4.582E-06"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"702.88770"	"1404.76811"	"1404.76845"	"-0.24"	"-0.00017"	"8/100"	"8"	"100"	"830302.001464844"	"HCD"	"MS2"	"3.370055"	"48.7"	"100.000"	"83.6139"	"28984"	"28984"	"28965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.3"	""	"49.9"	""	"55.3"	""	"93.0"	"3.0"	"95.9"	"86.3"	""	"981"	"52"	"36.000"	"29.000"	"0.000286179823646272"	"29"	"0"	"0.0001148"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.5682"	"0.0000"	"1"	"1"	"1"	"702.88776"	"1404.76824"	"1404.76845"	"-0.15"	"-0.00010"	"10/92"	"10"	"92"	"1617137.3182373"	"HCD"	"MS2"	"9.242541"	"76.5"	"100.000"	"82.7478"	"28633"	"28633"	"28614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.3"	""	"106.1"	""	"111.8"	""	"132.8"	""	"134.9"	"134.9"	""	"973"	"44"	"36.000"	"29.000"	"0.00177044665075886"	""	"0"	"8.963E-06"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.7049"	"0.0000"	"1"	"1"	"1"	"702.88776"	"1404.76824"	"1404.76845"	"-0.15"	"-0.00010"	"10/92"	"10"	"92"	"5060422.50384521"	"HCD"	"MS2"	"1.590787"	"201.2"	"100.000"	"83.0331"	"28749"	"28749"	"28732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"269.9"	""	"260.6"	""	"296.3"	""	"336.3"	""	"354.2"	"389.4"	""	"973"	"61"	"36.000"	"29.000"	"4.17910078212375E-05"	""	"0"	"4.594E-06"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFLIQASPR"	"[R].dEFLIQASPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"702.88794"	"1404.76860"	"1404.76845"	"0.11"	"0.00008"	"8/94"	"8"	"94"	"867818.53112793"	"HCD"	"MS2"	"14.28519"	"46.3"	"100.000"	"82.3167"	"28434"	"28434"	"28416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.7"	""	"41.3"	""	"54.1"	""	"94.4"	""	"108.2"	"96.0"	""	"963"	"55"	"36.000"	"29.000"	"0.00013633152459774"	"27"	"0"	"2.449E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"702.88794"	"1404.76860"	"1404.76845"	"0.11"	"0.00008"	"8/100"	"8"	"100"	"1533859.24700928"	"HCD"	"MS2"	"0.9193221"	"77.7"	"100.000"	"83.9067"	"29102"	"29102"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.9"	""	"71.1"	""	"74.8"	""	"166.1"	""	"158.7"	"160.2"	""	"963"	"53"	"36.000"	"29.000"	"0.000249227689584198"	"25"	"0"	"3.457E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"702.88794"	"1404.76860"	"1404.76845"	"0.11"	"0.00008"	"10/92"	"10"	"92"	"4901943.68212891"	"HCD"	"MS2"	"0.4709083"	"196.3"	"100.000"	"82.9277"	"28678"	"28678"	"28661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"284.4"	""	"255.6"	""	"282.6"	""	"326.8"	""	"345.4"	"365.9"	""	"963"	"60"	"36.000"	"29.000"	"4.7928770845476E-05"	""	"0"	"2.845E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFEQPLAISR"	"[K].dFEQPLAISR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"702.88818"	"1404.76909"	"1404.76845"	"0.46"	"0.00032"	"9/100"	"9"	"100"	"1564691.67279053"	"HCD"	"MS2"	"0"	"79.2"	"100.000"	"83.7832"	"29024"	"29024"	"29009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.4"	""	"71.2"	""	"83.3"	""	"166.7"	"0.5"	"166.9"	"165.2"	""	"985"	"43"	"36.000"	"29.000"	"0.00230890590706543"	"24"	"0"	"0.0003113"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGPAFTDAIR"	"[K].vEGPAFTDAIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.6415"	"0.0000"	"1"	"1"	"1"	"702.88824"	"1404.76921"	"1404.76845"	"0.55"	"0.00038"	"10/92"	"10"	"92"	"1783637.63006592"	"HCD"	"MS2"	"8.080587"	"84.4"	"100.000"	"83.3232"	"28866"	"28866"	"28848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.6"	""	"111.2"	""	"109.4"	""	"142.6"	"1.3"	"157.3"	"173.5"	""	"983"	"53"	"36.000"	"29.000"	"0.000238519297829683"	""	"0"	"7.909E-06"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"702.88928"	"1404.77129"	"1404.77182"	"-0.38"	"-0.00026"	"9/90"	"9"	"90"	"933124.183166504"	"HCD"	"MS2"	"12.97619"	"42.3"	"100.000"	"99.5364"	"35404"	"35404"	"35385"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"61.3"	""	"60.5"	""	"54.9"	""	"75.2"	"88.9"	""	"969"	"29"	"36.000"	"29.000"	"0.0670337910611828"	"18"	"0"	"0.0001729"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"702.88940"	"1404.77153"	"1404.77182"	"-0.20"	"-0.00014"	"14/90"	"14"	"90"	"798269.017211914"	"HCD"	"MS2"	"26.13399"	"36.1"	"100.000"	"99.5264"	"35371"	"35371"	"35351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"49.9"	""	"50.2"	""	"48.5"	""	"65.6"	"80.4"	""	"957"	"14"	"36.000"	"29.000"	"1.94931462929268"	"19"	"0.0001991"	"0.003517"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"702.88971"	"1404.77214"	"1404.77182"	"0.23"	"0.00016"	"8/90"	"8"	"90"	"730660.6875"	"HCD"	"MS2"	"14.39273"	"41.9"	"100.000"	"99.2111"	"35273"	"35273"	"35255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.7"	""	"61.4"	""	"62.6"	""	"57.9"	"0.4"	"80.1"	"84.2"	""	"965"	"51"	"36.000"	"29.000"	"0.000371105437438289"	"18"	"0"	"0.0003655"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"702.88977"	"1404.77226"	"1404.77182"	"0.32"	"0.00022"	"8/90"	"8"	"90"	"1661405.94342041"	"HCD"	"MS2"	"2.299266"	"86.7"	"100.000"	"99.2380"	"35255"	"35255"	"35241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.5"	""	"128.4"	""	"125.1"	""	"117.9"	""	"158.7"	"173.3"	""	"955"	"55"	"36.000"	"29.000"	"0.000157388637564736"	"23"	"0"	"3.437E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"468.94128"	"1404.80930"	"1404.80987"	"-0.40"	"-0.00019"	"9/76"	"9"	"76"	"3656148.29107666"	"HCD"	"MS2"	"10.47205"	"142.4"	"100.000"	"45.2132"	"13413"	"13413"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.0"	""	"200.4"	""	"223.9"	""	"220.3"	""	"256.3"	"248.2"	""	"940"	"30"	"36.000"	"29.000"	"0.0523718430788113"	"26"	"0.0001991"	"0.004889"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"468.94147"	"1404.80985"	"1404.80987"	"-0.01"	"-0.00001"	"10/76"	"10"	"76"	"3474780.4442749"	"HCD"	"MS2"	"7.919834"	"131.6"	"100.000"	"45.4723"	"13484"	"13484"	"13464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.0"	""	"181.2"	""	"226.5"	""	"208.7"	""	"238.3"	"222.4"	""	"939"	"38"	"36.000"	"29.000"	"0.00831066155930029"	"28"	"0.0001991"	"0.005236"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"702.90863"	"1404.80998"	"1404.80987"	"0.08"	"0.00006"	"7/76"	"7"	"76"	"2447942.59320068"	"HCD"	"MS2"	"0"	"190.6"	"100.000"	"45.3170"	"13455"	"13455"	"13436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.6"	""	"253.6"	""	"272.1"	""	"303.0"	"3.2"	"358.3"	"331.2"	""	"939"	"41"	"36.000"	"29.000"	"0.00351265580489987"	""	"0.0001991"	"0.002065"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"702.90869"	"1404.81011"	"1404.80987"	"0.17"	"0.00012"	"14/76"	"14"	"76"	"3454832.77941895"	"HCD"	"MS2"	"0"	"268.9"	"100.000"	"45.5387"	"13511"	"13511"	"13494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"363.1"	""	"356.5"	""	"445.0"	""	"423.4"	"3.4"	"510.3"	"444.5"	""	"939"	"45"	"36.000"	"29.000"	"0.00153332987204912"	""	"0.0001991"	"0.002299"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"702.90906"	"1404.81084"	"1404.80987"	"0.69"	"0.00049"	"14/76"	"14"	"76"	"3262174.90771484"	"HCD"	"MS2"	"0"	"260.3"	"100.000"	"45.2557"	"13396"	"13396"	"13378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"402.3"	""	"384.7"	""	"419.0"	""	"421.6"	""	"443.6"	"390.9"	""	"940"	"50"	"36.000"	"29.000"	"0.000511797143866713"	""	"0.0001686"	"0.001523"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVQTNDLK"	"[R].eVQTNDLk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.4800"	"0.0000"	"1"	"1"	"1"	"702.90912"	"1404.81096"	"1404.80987"	"0.78"	"0.00055"	"14/76"	"14"	"76"	"4217536.89715576"	"HCD"	"MS2"	"0"	"187.7"	"100.000"	"45.0226"	"13335"	"13335"	"13315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"282.7"	""	"269.2"	""	"270.8"	""	"356.2"	""	"325.4"	"275.6"	""	"940"	"50"	"36.000"	"29.000"	"0.000491018503033776"	""	"9.9E-05"	"0.0008319"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNNLAVSSK"	"[K].nNNLAVSSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"702.91315"	"1404.81902"	"1404.82110"	"-1.48"	"-0.00104"	"6/82"	"6"	"82"	"373128.991027832"	"HCD"	"MS2"	"100"	"35.7"	"100.000"	"38.2291"	"10580"	"10580"	"10551"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.4"	""	"43.1"	""	"52.0"	""	"47.4"	""	"70.9"	"77.7"	""	"906"	"27"	"36.000"	"29.000"	"0.0895567246970674"	"22"	"0.0001686"	"0.001283"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNNLAVSSK"	"[K].nNNLAVSSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"702.91449"	"1404.82170"	"1404.82110"	"0.43"	"0.00030"	"7/82"	"7"	"82"	"352023.893981934"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"38.3165"	"10580"	"10580"	"10550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"40.2"	""	"55.8"	""	"49.3"	""	"58.6"	"56.8"	""	"886"	"32"	"36.000"	"29.000"	"0.0253165036045637"	"21"	"0"	"0.0003105"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSEELLDK"	"[K].lSEELLDk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"Q6P7D4"	"Cytochrome P450 20A1 OS=Rattus norvegicus OX=10116 GN=Cyp20a1 PE=2 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"3"	"702.92059"	"1404.83391"	"1404.83502"	"-0.79"	"-0.00055"	"5/66"	"5"	"66"	"545852.908203125"	"HCD"	"MS2"	"29.26329"	"39.9"	"100.000"	"98.0147"	"34792"	"34792"	"34773"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"41.2"	""	"58.0"	""	"65.8"	"0.5"	"77.4"	"89.1"	""	"813"	"16"	"36.000"	"29.000"	"1.13516907146298"	"22"	"0.001718"	"0.01497"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEDLEK"	"[K].lTVEDLEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"468.94952"	"1404.83402"	"1404.83502"	"-0.71"	"-0.00033"	"6/66"	"6"	"66"	"698360.054870605"	"HCD"	"MS2"	"15.19659"	"31.2"	"100.000"	"94.1357"	"33224"	"33224"	"33204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.4"	""	"37.5"	""	"32.9"	""	"61.8"	""	"60.9"	"60.3"	""	"813"	"39"	"36.000"	"29.000"	"0.00488720492671977"	"28"	"0.0003938"	"0.006281"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEDLEK"	"[K].lTVEDLEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"702.92084"	"1404.83440"	"1404.83502"	"-0.44"	"-0.00031"	"14/66"	"14"	"66"	"504147.354370117"	"HCD"	"MS2"	"16.56286"	"44.8"	"100.000"	"93.9209"	"33137"	"33137"	"33110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"39.6"	""	"46.4"	""	"99.1"	""	"109.0"	"93.8"	""	"815"	"49"	"36.000"	"29.000"	"0.000485431118271155"	"27"	"0"	"0.0002464"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEDLEK"	"[K].lTVEDLEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"702.92084"	"1404.83440"	"1404.83502"	"-0.44"	"-0.00031"	"14/66"	"14"	"66"	"905281.731323242"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"94.2396"	"33266"	"33266"	"33247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.4"	""	"58.8"	""	"81.1"	""	"153.3"	""	"180.5"	"165.6"	""	"815"	"47"	"36.000"	"29.000"	"0.000790910995119058"	"27"	"9.9E-05"	"0.0005251"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEDLEK"	"[K].lTVEDLEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"702.92096"	"1404.83464"	"1404.83502"	"-0.27"	"-0.00019"	"14/66"	"14"	"66"	"543943.628723145"	"HCD"	"MS2"	"0"	"44.7"	"100.000"	"94.3486"	"33275"	"33275"	"33255"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	""	"38.5"	""	"51.4"	""	"84.4"	""	"108.9"	"100.9"	""	"814"	"47"	"36.000"	"29.000"	"0.000795416158500584"	"28"	"0"	"0.0003922"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEDLEK"	"[K].lTVEDLEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"468.94974"	"1404.83466"	"1404.83502"	"-0.25"	"-0.00012"	"9/66"	"9"	"66"	"705726.526306152"	"HCD"	"MS2"	"30.70307"	"29.2"	"100.000"	"94.2100"	"33219"	"33219"	"33195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"29.9"	""	"34.6"	""	"62.1"	"0.5"	"60.3"	"58.3"	""	"814"	"29"	"36.000"	"29.000"	"0.055666563201751"	"26"	"0.003529"	"0.03927"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVEDLEK"	"[K].lTVEDLEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"Q66HR2"	"Microtubule-associated protein RP/EB family member 1 OS=Rattus norvegicus OX=10116 GN=Mapre1 PE=1 SV=3"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"702.92157"	"1404.83586"	"1404.83502"	"0.60"	"0.00042"	"14/66"	"14"	"66"	"991489.822998047"	"HCD"	"MS2"	"5.870339"	"80.8"	"100.000"	"94.0483"	"33153"	"33153"	"33131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.0"	""	"72.7"	""	"84.9"	""	"178.1"	"0.6"	"172.9"	"169.2"	""	"831"	"47"	"36.000"	"29.000"	"0.000752611808483445"	"27"	"0"	"0.0002018"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGVDSQIK"	"[K].sLGVDSQIk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"468.95285"	"1404.84400"	"1404.84625"	"-1.60"	"-0.00075"	"5/78"	"5"	"78"	"287764.260070801"	"HCD"	"MS2"	"58.57446"	"16.4"	"100.000"	"63.3692"	"20781"	"20781"	"20750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"23.2"	""	"21.3"	""	"30.2"	""	"28.0"	"30.7"	""	"710"	"7"	"35.000"	"28.000"	"7.00210071320773"	"19"	"0.001615"	"0.0139"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TSPSSSPASLSR"	"[K].tSPSSSPASLSR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"703.37714"	"1405.74700"	"1405.74844"	"-1.03"	"-0.00072"	"4/108"	"4"	"108"	"171319.063598633"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"31.1411"	"7678"	"7678"	"7652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"12.0"	""	"13.9"	""	"17.4"	""	"15.3"	"17.3"	""	"868"	"8"	"36.000"	"29.000"	"6.86261649043347"	"16"	"0.004713"	"0.05555"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSSSPASLSR"	"[K].tSPSSSPASLSR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"703.37775"	"1405.74822"	"1405.74844"	"-0.16"	"-0.00011"	"4/108"	"4"	"108"	"170640.198852539"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"31.0325"	"7672"	"7672"	"7649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.8"	""	"10.5"	""	"15.6"	""	"15.8"	""	"17.7"	"19.7"	""	"854"	"12"	"36.000"	"29.000"	"2.96775383610416"	"21"	"0.006033"	"0.07328"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"469.25888"	"1405.76209"	"1405.76369"	"-1.14"	"-0.00054"	"13/106"	"13"	"106"	"1802983.73590088"	"HCD"	"MS2"	"7.77418"	"19.1"	"100.000"	"78.9463"	"27092"	"27092"	"27073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.6"	""	"26.5"	""	"27.7"	""	"33.8"	""	"31.9"	"39.4"	""	"900"	"41"	"36.000"	"29.000"	"0.00390132844091197"	"21"	"0"	"4.545E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"703.38477"	"1405.76225"	"1405.76369"	"-1.02"	"-0.00072"	"10/106"	"10"	"106"	"19108720.321228"	"HCD"	"MS2"	"18.11805"	"306.8"	"58.082"	"78.9235"	"27057"	"27057"	"27040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"441.8"	""	"429.3"	""	"303.2"	""	"604.8"	"1.5"	"608.8"	"519.4"	""	"900"	"42"	"36.000"	"29.000"	"0.00253636945121679"	"16"	"0"	"9.595E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"469.25916"	"1405.76291"	"1405.76369"	"-0.56"	"-0.00026"	"13/106"	"13"	"106"	"4786248.9241333"	"HCD"	"MS2"	"3.491037"	"28.6"	"100.000"	"79.1794"	"27161"	"27161"	"27144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.8"	""	"41.2"	""	"31.7"	""	"50.2"	""	"46.1"	"58.8"	""	"892"	"40"	"36.000"	"29.000"	"0.00436852533492279"	"16"	"0"	"0.0002096"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"469.25919"	"1405.76300"	"1405.76369"	"-0.49"	"-0.00023"	"11/106"	"11"	"106"	"1311199.24707031"	"HCD"	"MS2"	"9.132708"	"18.9"	"100.000"	"79.4745"	"27280"	"27280"	"27259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.9"	""	"23.5"	""	"19.7"	""	"28.1"	"1.4"	"40.9"	"38.1"	""	"892"	"41"	"36.000"	"29.000"	"0.00325338049573538"	"19"	"0"	"6.014E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"469.25919"	"1405.76300"	"1405.76369"	"-0.49"	"-0.00023"	"14/106"	"14"	"106"	"5303029.52722168"	"HCD"	"MS2"	"1.864958"	"27.7"	"100.000"	"79.2413"	"27213"	"27213"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.9"	""	"38.4"	""	"29.4"	""	"45.9"	"0.3"	"52.5"	"49.3"	""	"892"	"49"	"36.000"	"29.000"	"0.000615651382012886"	"20"	"0"	"0.000245"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"469.25922"	"1405.76310"	"1405.76369"	"-0.43"	"-0.00020"	"13/106"	"13"	"106"	"2280388.91912842"	"HCD"	"MS2"	"8.945648"	"21.8"	"100.000"	"78.8612"	"27031"	"27031"	"27009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"25.2"	""	"27.4"	""	"33.8"	"0.9"	"46.2"	"38.4"	""	"893"	"42"	"36.000"	"29.000"	"0.00283022826076218"	"19"	"0"	"0.0001279"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"703.38531"	"1405.76335"	"1405.76369"	"-0.24"	"-0.00017"	"9/106"	"9"	"106"	"18317710.8800049"	"HCD"	"MS2"	"16.54816"	"302.3"	"63.498"	"79.0502"	"27135"	"27135"	"27118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"435.6"	""	"439.2"	""	"295.3"	""	"599.6"	""	"582.8"	"514.1"	""	"897"	"46"	"36.000"	"29.000"	"0.00104655594093303"	"21"	"0"	"2.012E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"703.38538"	"1405.76348"	"1405.76369"	"-0.16"	"-0.00011"	"16/106"	"16"	"106"	"661057.69921875"	"HCD"	"MS2"	"22.12257"	"40.3"	"100.000"	"79.8161"	"27419"	"27419"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	""	"51.3"	""	"52.4"	""	"65.9"	""	"74.5"	"83.5"	""	"894"	"30"	"36.000"	"29.000"	"0.0454263165713201"	"14"	"0"	"0.000211"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"703.38562"	"1405.76396"	"1405.76369"	"0.19"	"0.00013"	"9/106"	"9"	"106"	"3132630.41833496"	"HCD"	"MS2"	"0.6142957"	"124.4"	"100.000"	"79.6587"	"27383"	"27383"	"27366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.5"	""	"160.8"	""	"119.3"	""	"227.1"	"3.1"	"249.3"	"226.7"	""	"883"	"51"	"36.000"	"29.000"	"0.000368918732549096"	"18"	"0"	"1.852E-06"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"469.25952"	"1405.76401"	"1405.76369"	"0.23"	"0.00011"	"5/106"	"5"	"106"	"1670202.7911377"	"HCD"	"MS2"	"5.707982"	"19.1"	"100.000"	"79.5477"	"27337"	"27337"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"25.1"	""	"24.0"	""	"32.5"	"1.3"	"34.4"	"36.5"	""	"883"	"42"	"36.000"	"29.000"	"0.00287693935977862"	"19"	"0"	"0.0002474"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"703.38586"	"1405.76445"	"1405.76369"	"0.54"	"0.00038"	"8/106"	"8"	"106"	"4497287.09991455"	"HCD"	"MS2"	"0.7319134"	"167.8"	"100.000"	"79.5022"	"27292"	"27292"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"232.5"	""	"227.0"	""	"168.8"	""	"323.7"	""	"343.7"	"296.1"	""	"912"	"61"	"36.000"	"29.000"	"3.79284279622818E-05"	"22"	"0"	"5.606E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"703.38605"	"1405.76482"	"1405.76369"	"0.80"	"0.00056"	"8/106"	"8"	"106"	"17953487.7056885"	"HCD"	"MS2"	"1.325694"	"467.7"	"73.366"	"79.3589"	"27261"	"27261"	"27244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"683.7"	""	"630.0"	""	"453.3"	""	"916.9"	""	"933.0"	"818.4"	""	"910"	"56"	"36.000"	"29.000"	"0.00010519894795299"	"22"	"0"	"6.306E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"703.38635"	"1405.76543"	"1405.76369"	"1.23"	"0.00087"	"18/106"	"18"	"106"	"22172942.2111816"	"HCD"	"MS2"	"1.066036"	"308.8"	"42.237"	"79.2116"	"27174"	"27174"	"27160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"442.2"	""	"407.4"	""	"305.4"	""	"609.0"	""	"599.5"	"565.7"	""	"889"	"53"	"36.000"	"29.000"	"0.000203175700283812"	"24"	"0"	"9.364E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVMPEVNK"	"[K].dVmPEVNk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"703.39093"	"1405.77458"	"1405.77612"	"-1.09"	"-0.00077"	"7/66"	"7"	"66"	"543856.24395752"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"44.2608"	"13028"	"13028"	"13001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.0"	""	"30.7"	""	"45.1"	""	"94.8"	""	"75.7"	"89.5"	""	"948"	"29"	"36.000"	"29.000"	"0.0605031995376577"	"24"	"0.004234"	"0.04798"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSQPQVVTR"	"[R].yVSQPQVVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O54980"	"Synaptogyrin-2 OS=Rattus norvegicus OX=10116 GN=Syngr2 PE=1 SV=2"	"O54980"	"Synaptogyrin-2 OS=Rattus norvegicus OX=10116 GN=Syngr2 PE=1 SV=2"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"703.40228"	"1405.79729"	"1405.80008"	"-1.99"	"-0.00140"	"6/96"	"6"	"96"	"1742280.78265381"	"HCD"	"MS2"	"0"	"111.4"	"100.000"	"45.7068"	"13580"	"13580"	"13557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.4"	""	"128.6"	""	"154.6"	""	"199.4"	""	"223.9"	"217.6"	""	"955"	"28"	"36.000"	"29.000"	"0.0696583809281479"	"27"	"0.000885"	"0.007712"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSQPQVVTR"	"[R].yVSQPQVVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O54980"	"Synaptogyrin-2 OS=Rattus norvegicus OX=10116 GN=Syngr2 PE=1 SV=2"	"O54980"	"Synaptogyrin-2 OS=Rattus norvegicus OX=10116 GN=Syngr2 PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"703.40289"	"1405.79851"	"1405.80008"	"-1.12"	"-0.00079"	"6/96"	"6"	"96"	"1513655.58258057"	"HCD"	"MS2"	"0"	"99.5"	"100.000"	"45.4478"	"13509"	"13509"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.1"	""	"117.9"	""	"124.9"	""	"178.2"	""	"211.4"	"190.9"	""	"953"	"28"	"36.000"	"29.000"	"0.0701556907409191"	"29"	"0.003317"	"0.03633"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVTGDNVNTAR"	"[R].mVTGDNVNTAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"703.86627"	"1406.72527"	"1406.72593"	"-0.47"	"-0.00033"	"7/102"	"7"	"102"	"705824.518188477"	"HCD"	"MS2"	"13.32537"	"53.7"	"100.000"	"35.9203"	"9646"	"9646"	"9617"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.8"	""	"63.2"	""	"67.1"	""	"92.4"	""	"100.9"	"111.5"	""	"775"	"42"	"35.000"	"28.000"	"0.00227652124105288"	"20"	"0.000885"	"0.007681"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"703.87762"	"1406.74797"	"1406.74771"	"0.19"	"0.00013"	"5/106"	"5"	"106"	"243034.65246582"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"85.9527"	"29929"	"29929"	"29903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.5"	""	"27.5"	"2.0"	"28.5"	""	"20.8"	""	"24.7"	"24.3"	""	"892"	"31"	"36.000"	"29.000"	"0.0350215093036092"	"17"	"0.002189"	"0.02117"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPVTSVDAAFR"	"[K].nPVTSVDAAFR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"703.87860"	"1406.74993"	"1406.74771"	"1.57"	"0.00111"	"11/106"	"11"	"106"	"214682.209228516"	"HCD"	"MS2"	"12.79522"	"14.0"	"100.000"	"85.9740"	"29908"	"29908"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.2"	""	"20.2"	""	"21.7"	""	"19.8"	""	"21.1"	"20.1"	""	"948"	"25"	"36.000"	"29.000"	"0.152678660706835"	"17"	"0.001348"	"0.01116"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTEDIEK"	"[K].vDTEDIEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"703.89124"	"1406.77519"	"1406.77790"	"-1.92"	"-0.00135"	"6/66"	"6"	"66"	"568853.975830078"	"HCD"	"MS2"	"0"	"51.1"	"100.000"	"57.8221"	"18494"	"18494"	"18470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.4"	""	"57.8"	""	"58.8"	""	"75.7"	""	"113.5"	"105.1"	""	"972"	"11"	"36.000"	"29.000"	"4.19407574214747"	"20"	"0.002525"	"0.02521"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVAQVESLR"	"[R].fEVAQVESLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"703.89502"	"1406.78276"	"1406.78410"	"-0.95"	"-0.00067"	"9/94"	"9"	"94"	"176255.441589355"	"HCD"	"MS2"	"9.520146"	"14.0"	"100.000"	"95.9712"	"33966"	"33966"	"33947"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"14.4"	""	"15.7"	""	"23.0"	""	"31.3"	"35.2"	""	"938"	"10"	"36.000"	"29.000"	"5.20202988358066"	"20"	"0.003317"	"0.03621"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFEGTNDILR"	"[R].iFEGTNDILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"703.89508"	"1406.78288"	"1406.78410"	"-0.86"	"-0.00061"	"8/88"	"8"	"88"	"802506.553405762"	"HCD"	"MS2"	"13.41415"	"43.2"	"100.000"	"101.9639"	"36361"	"36361"	"36339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.4"	""	"58.0"	""	"61.6"	""	"66.1"	""	"73.2"	"80.5"	""	"938"	"60"	"36.000"	"29.000"	"4.29707409867217E-05"	"27"	"0"	"3.472E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFEGTNDILR"	"[R].iFEGTNDILR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"703.89569"	"1406.78411"	"1406.78410"	"0.01"	"0.00000"	"15/88"	"15"	"88"	"606204.520874023"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"102.1211"	"36449"	"36449"	"36430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"45.9"	""	"47.7"	""	"46.5"	""	"59.7"	"63.7"	""	"937"	"46"	"36.000"	"29.000"	"0.00119594056029679"	"23"	"0"	"8.868E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVAQVESLR"	"[R].fEVAQVESLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"703.89575"	"1406.78423"	"1406.78410"	"0.09"	"0.00007"	"7/94"	"7"	"94"	"371476.500854492"	"HCD"	"MS2"	"7.376558"	"22.4"	"100.000"	"95.6574"	"33839"	"33839"	"33820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"26.9"	""	"33.2"	""	"36.8"	""	"51.6"	"45.6"	""	"937"	"35"	"36.000"	"29.000"	"0.0161699841878849"	"20"	"0"	"0.0002869"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEVAQVESLR"	"[R].fEVAQVESLR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"F1MA98"	"Nucleoprotein TPR OS=Rattus norvegicus OX=10116 GN=Tpr PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"703.89612"	"1406.78496"	"1406.78410"	"0.61"	"0.00043"	"8/94"	"8"	"94"	"433215.557250977"	"HCD"	"MS2"	"30.11652"	"26.2"	"100.000"	"95.6484"	"33803"	"33803"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"25.6"	""	"38.3"	""	"42.8"	"0.5"	"52.3"	"58.9"	""	"945"	"19"	"36.000"	"29.000"	"0.60590120030497"	"24"	"0.0001991"	"0.00524"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEAAAEATK"	"[K].sAEAAAEATk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"703.89685"	"1406.78642"	"1406.78913"	"-1.92"	"-0.00135"	"16/88"	"16"	"88"	"604178.565002441"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"35.5505"	"9495"	"9495"	"9474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.0"	"2.1"	"59.8"	""	"77.5"	""	"75.1"	""	"69.5"	"83.7"	""	"933"	"46"	"36.000"	"29.000"	"0.00131477563743487"	"20"	"0"	"3.793E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEAAAEATK"	"[K].sAEAAAEATk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"703.89722"	"1406.78716"	"1406.78913"	"-1.40"	"-0.00099"	"16/88"	"16"	"88"	"609445.987670898"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"35.6927"	"9516"	"9516"	"9491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.7"	""	"59.7"	""	"67.1"	""	"66.2"	""	"83.0"	"93.0"	""	"907"	"47"	"36.000"	"29.000"	"0.000938809101676737"	"20"	"0"	"6.495E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSPTRPNPPVR"	"[R].gSPTRPNPPVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"469.60681"	"1406.80588"	"1406.80656"	"-0.48"	"-0.00023"	"5/96"	"5"	"96"	"1690915.67938232"	"HCD"	"MS2"	"11.56763"	"92.5"	"100.000"	"23.7166"	"4749"	"4749"	"4724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.6"	""	"126.0"	""	"119.9"	""	"153.1"	""	"181.8"	"172.3"	""	"872"	"7"	"36.000"	"29.000"	"9.08838025030418"	"16"	"0.0005778"	"0.007074"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEQSGSLK"	"[K].sLEQSGSLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"703.91528"	"1406.82329"	"1406.82552"	"-1.58"	"-0.00111"	"13/86"	"13"	"86"	"1741701.72186279"	"HCD"	"MS2"	"40.79102"	"148.5"	"100.000"	"48.6278"	"14761"	"14761"	"14740"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"236.6"	""	"192.0"	""	"195.5"	""	"224.7"	""	"278.3"	"282.9"	""	"774"	"44"	"35.000"	"28.000"	"0.00143453439329857"	"23"	"0"	"0.000315"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEQSGSLK"	"[K].sLEQSGSLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"703.91571"	"1406.82414"	"1406.82552"	"-0.97"	"-0.00069"	"8/86"	"8"	"86"	"1735611.0489502"	"HCD"	"MS2"	"31.42063"	"155.8"	"100.000"	"48.3000"	"14664"	"14664"	"14655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"247.1"	""	"195.5"	""	"194.5"	""	"251.0"	""	"285.9"	"303.6"	""	"763"	"43"	"35.000"	"28.000"	"0.00173178726752052"	"23"	"0"	"0.0003173"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLGTQSK"	"[K].sEVLGTQSk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"703.91595"	"1406.82463"	"1406.82552"	"-0.63"	"-0.00044"	"8/82"	"8"	"82"	"594894.092651367"	"HCD"	"MS2"	"0"	"52.9"	"100.000"	"43.0951"	"12551"	"12551"	"12523"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.6"	""	"61.8"	""	"73.2"	""	"92.9"	""	"89.7"	"87.6"	""	"758"	"52"	"35.000"	"28.000"	"0.000225755952397495"	"26"	"0"	"1.063E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEQSGSLK"	"[K].sLEQSGSLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"703.91632"	"1406.82536"	"1406.82552"	"-0.11"	"-0.00008"	"10/86"	"10"	"86"	"361378.208251953"	"HCD"	"MS2"	"100"	"39.7"	"100.000"	"48.6287"	"14798"	"14798"	"14776"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.4"	""	"48.6"	""	"52.6"	""	"59.5"	""	"80.6"	"81.6"	""	"755"	"10"	"35.000"	"28.000"	"3.40343104446249"	"15"	"0.002588"	"0.02681"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVLGTQSK"	"[K].sEVLGTQSk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"703.91663"	"1406.82598"	"1406.82552"	"0.33"	"0.00023"	"8/82"	"8"	"82"	"585533.919128418"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"43.3112"	"12605"	"12605"	"12578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.8"	""	"69.4"	""	"58.1"	""	"83.7"	"2.2"	"86.3"	"96.4"	""	"749"	"59"	"35.000"	"28.000"	"4.23108570044963E-05"	"27"	"0"	"2.452E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEQSGSLK"	"[K].sLEQSGSLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"703.91711"	"1406.82695"	"1406.82552"	"1.02"	"0.00072"	"8/86"	"8"	"86"	"454944.45123291"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"48.9335"	"14886"	"14886"	"14863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"65.4"	""	"54.4"	""	"68.1"	"0.6"	"74.1"	"87.8"	""	"728"	"55"	"35.000"	"28.000"	"0.000119426686693175"	"24"	"0"	"6.993E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEMEVVK"	"[K].tLEMEVVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"703.91962"	"1406.83196"	"1406.83291"	"-0.68"	"-0.00048"	"7/64"	"7"	"64"	"1297434.37054443"	"HCD"	"MS2"	"0"	"102.8"	"100.000"	"87.6423"	"30573"	"30573"	"30559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.9"	""	"88.7"	""	"102.9"	""	"156.5"	""	"249.7"	"303.4"	""	"746"	"42"	"35.000"	"28.000"	"0.00232118006368096"	"26"	"9.9E-05"	"0.0009967"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEMEVVK"	"[K].tLEMEVVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"703.91968"	"1406.83208"	"1406.83291"	"-0.59"	"-0.00042"	"7/64"	"7"	"64"	"1210392.76428223"	"HCD"	"MS2"	"1.899889"	"101.3"	"100.000"	"87.6112"	"30595"	"30595"	"30577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.2"	""	"99.6"	""	"93.4"	""	"128.4"	""	"254.5"	"302.6"	""	"746"	"42"	"35.000"	"28.000"	"0.00220652489547452"	"26"	"0.0001686"	"0.001273"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEMEVVK"	"[K].tLEMEVVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"703.91992"	"1406.83257"	"1406.83291"	"-0.24"	"-0.00017"	"7/64"	"7"	"64"	"404087.777160645"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"87.9303"	"30688"	"30688"	"30670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"35.1"	""	"35.3"	""	"56.6"	"1.4"	"88.2"	"100.0"	""	"739"	"43"	"35.000"	"28.000"	"0.00205406623061414"	"24"	"0"	"0.0003391"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEMEVVK"	"[K].tLEMEVVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"703.92023"	"1406.83318"	"1406.83291"	"0.19"	"0.00013"	"12/64"	"12"	"64"	"242526.084533691"	"HCD"	"MS2"	"18.87708"	"22.9"	"100.000"	"87.9154"	"30719"	"30719"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"25.2"	""	"25.3"	""	"31.1"	""	"56.5"	"61.4"	""	"739"	"38"	"35.000"	"28.000"	"0.00556691310956001"	"25"	"0"	"0.0003807"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34076"	"1407.67424"	"1407.67758"	"-2.37"	"-0.00167"	"9/80"	"9"	"80"	"460964.299438477"	"HCD"	"MS2"	"39.27796"	"30.0"	"100.000"	"56.7850"	"18107"	"18107"	"18085"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"38.3"	""	"36.8"	""	"47.2"	""	"60.2"	"61.7"	""	"481"	"28"	"33.000"	"26.000"	"0.0354091156835069"	"14"	"0.002373"	"0.02244"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"704.34125"	"1407.67522"	"1407.67758"	"-1.68"	"-0.00118"	"7/80"	"7"	"80"	"791117.062438965"	"HCD"	"MS2"	"60.24409"	"64.5"	"100.000"	"59.5113"	"19183"	"19183"	"19157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.2"	""	"95.3"	""	"93.0"	""	"92.2"	"0.4"	"127.4"	"114.2"	""	"490"	"17"	"33.000"	"26.000"	"0.545966611571225"	"16"	"0.0004582"	"0.006475"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"704.34137"	"1407.67546"	"1407.67758"	"-1.51"	"-0.00106"	"6/80"	"6"	"80"	"406560.828552246"	"HCD"	"MS2"	"22.79833"	"33.6"	"100.000"	"61.9279"	"20162"	"20162"	"20139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"40.3"	""	"43.1"	""	"47.4"	""	"76.9"	"69.6"	""	"504"	"20"	"34.000"	"27.000"	"0.249115379853548"	"16"	"0.006577"	"0.08119"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34137"	"1407.67546"	"1407.67758"	"-1.51"	"-0.00106"	"9/80"	"9"	"80"	"477494.289794922"	"HCD"	"MS2"	"15.81151"	"29.5"	"100.000"	"54.3116"	"17107"	"17107"	"17079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"36.6"	""	"34.5"	""	"46.5"	"1.2"	"64.4"	"54.9"	""	"504"	"6"	"34.000"	"27.000"	"5.98963752229468"	"13"	"0.008217"	"0.1045"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34161"	"1407.67595"	"1407.67758"	"-1.16"	"-0.00082"	"7/80"	"7"	"80"	"724012.577087402"	"HCD"	"MS2"	"45.58336"	"56.6"	"100.000"	"56.4494"	"17938"	"17938"	"17919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"59.3"	""	"57.4"	""	"145.2"	""	"101.2"	"117.9"	""	"495"	"19"	"33.000"	"26.000"	"0.292129357323803"	"14"	"0.0001991"	"0.002549"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"704.34167"	"1407.67607"	"1407.67758"	"-1.07"	"-0.00075"	"11/80"	"11"	"80"	"434237.726928711"	"HCD"	"MS2"	"23.63382"	"34.2"	"100.000"	"61.8308"	"20156"	"20156"	"20133"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"43.4"	""	"44.1"	""	"49.5"	""	"74.1"	"72.0"	""	"495"	"19"	"33.000"	"26.000"	"0.330046554460423"	"16"	"0.00329"	"0.03541"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"704.34174"	"1407.67620"	"1407.67758"	"-0.99"	"-0.00069"	"8/80"	"8"	"80"	"354352.856689453"	"HCD"	"MS2"	"9.9403"	"26.5"	"100.000"	"61.0033"	"19822"	"19822"	"19800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.3"	""	"32.4"	""	"30.9"	""	"52.1"	""	"55.8"	"50.5"	""	"495"	"20"	"33.000"	"26.000"	"0.233117675139403"	"15"	"0.005392"	"0.06819"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"704.34174"	"1407.67620"	"1407.67758"	"-0.99"	"-0.00069"	"7/80"	"7"	"80"	"589841.115356445"	"HCD"	"MS2"	"55.37975"	"48.6"	"100.000"	"59.3961"	"19171"	"19171"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.2"	""	"77.6"	""	"64.0"	""	"63.9"	""	"95.4"	"97.7"	""	"495"	"23"	"33.000"	"26.000"	"0.117374891351911"	"21"	"0.0001991"	"0.002808"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"704.34174"	"1407.67620"	"1407.67758"	"-0.99"	"-0.00069"	"12/80"	"12"	"80"	"534102.641723633"	"HCD"	"MS2"	"32.2483"	"45.7"	"100.000"	"59.9072"	"19377"	"19377"	"19353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.2"	""	"54.6"	""	"44.1"	""	"77.8"	""	"104.8"	"96.5"	""	"495"	"14"	"33.000"	"26.000"	"1.01994135976589"	"15"	"0.0001991"	"0.004402"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34186"	"1407.67644"	"1407.67758"	"-0.81"	"-0.00057"	"7/80"	"7"	"80"	"2035677.40530396"	"HCD"	"MS2"	"2.141875"	"96.7"	"100.000"	"50.8269"	"15690"	"15690"	"15670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.0"	""	"87.1"	""	"82.4"	""	"292.5"	"2.1"	"195.2"	"164.6"	""	"495"	"41"	"33.000"	"26.000"	"0.00183474284721977"	"15"	"0.0001686"	"0.001249"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"704.34186"	"1407.67644"	"1407.67758"	"-0.81"	"-0.00057"	"7/80"	"7"	"80"	"1525927.80810547"	"HCD"	"MS2"	"35.16152"	"74.7"	"100.000"	"50.6003"	"15564"	"15564"	"15542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.5"	""	"72.6"	""	"68.2"	""	"210.8"	""	"153.9"	"122.0"	""	"495"	"39"	"33.000"	"26.000"	"0.00325518145967579"	"17"	"9.9E-05"	"0.0008441"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34192"	"1407.67656"	"1407.67758"	"-0.72"	"-0.00051"	"11/80"	"11"	"80"	"447264.287536621"	"HCD"	"MS2"	"22.00957"	"39.4"	"100.000"	"61.3992"	"19952"	"19952"	"19928"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.4"	""	"43.8"	""	"41.7"	""	"67.5"	"1.0"	"84.6"	"83.2"	""	"495"	"24"	"33.000"	"26.000"	"0.106800971514872"	"14"	"0.0001686"	"0.00122"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34192"	"1407.67656"	"1407.67758"	"-0.72"	"-0.00051"	"7/80"	"7"	"80"	"421810.260131836"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"62.1253"	"20275"	"20275"	"20255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"37.5"	""	"37.0"	""	"48.4"	""	"62.7"	"61.9"	""	"495"	"22"	"33.000"	"26.000"	"0.171622886989101"	"14"	"0.0001991"	"0.004202"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34198"	"1407.67668"	"1407.67758"	"-0.64"	"-0.00045"	"6/80"	"6"	"80"	"357273.010864258"	"HCD"	"MS2"	"22.15881"	"24.9"	"100.000"	"61.0977"	"19829"	"19829"	"19802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"36.7"	""	"28.1"	""	"40.2"	"1.7"	"56.0"	"46.4"	""	"495"	"27"	"33.000"	"26.000"	"0.0542719221499236"	"14"	"0.003904"	"0.04236"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"704.34198"	"1407.67668"	"1407.67758"	"-0.64"	"-0.00045"	"7/80"	"7"	"80"	"425229.008605957"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"62.2557"	"20295"	"20295"	"20272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"50.3"	""	"39.8"	""	"57.4"	"0.1"	"60.5"	"65.9"	""	"495"	"19"	"33.000"	"26.000"	"0.2914574784464"	"17"	"0.0001991"	"0.004322"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34198"	"1407.67668"	"1407.67758"	"-0.64"	"-0.00045"	"11/80"	"11"	"80"	"953858.690307617"	"HCD"	"MS2"	"64.44619"	"70.3"	"100.000"	"63.3154"	"20727"	"20727"	"20699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.3"	""	"74.8"	""	"87.2"	""	"113.3"	"0.2"	"171.3"	"152.8"	""	"495"	"5"	"33.000"	"26.000"	"7.84467947103263"	"13"	"0.001348"	"0.01149"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"704.34216"	"1407.67705"	"1407.67758"	"-0.38"	"-0.00027"	"7/80"	"7"	"80"	"2884705.58734131"	"HCD"	"MS2"	"6.184874"	"126.1"	"100.000"	"50.9085"	"15690"	"15690"	"15669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.5"	""	"119.1"	""	"106.4"	""	"388.4"	"0.6"	"256.0"	"203.8"	""	"501"	"39"	"33.000"	"26.000"	"0.00299094020168301"	"17"	"9.9E-05"	"0.0007841"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34222"	"1407.67717"	"1407.67758"	"-0.29"	"-0.00021"	"7/80"	"7"	"80"	"1374251.36657715"	"HCD"	"MS2"	"4.420924"	"69.1"	"100.000"	"51.2030"	"15810"	"15810"	"15789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"65.1"	""	"67.1"	""	"212.2"	"1.4"	"127.8"	"110.5"	""	"507"	"39"	"34.000"	"27.000"	"0.00304073073348367"	"15"	"0.0001991"	"0.002868"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34229"	"1407.67729"	"1407.67758"	"-0.20"	"-0.00014"	"7/80"	"7"	"80"	"541357.889404297"	"HCD"	"MS2"	"35.26815"	"42.2"	"100.000"	"59.8291"	"19312"	"19312"	"19290"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"52.0"	""	"47.3"	""	"64.3"	""	"100.3"	"84.4"	""	"507"	"24"	"34.000"	"27.000"	"0.109895007671239"	"14"	"0.0001991"	"0.003315"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"704.34229"	"1407.67729"	"1407.67758"	"-0.20"	"-0.00014"	"7/80"	"7"	"80"	"2802689.18817139"	"HCD"	"MS2"	"5.729424"	"124.9"	"100.000"	"50.5326"	"15571"	"15571"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.1"	""	"125.4"	""	"113.5"	""	"394.0"	"0.4"	"240.8"	"201.6"	""	"507"	"39"	"34.000"	"27.000"	"0.00311155845098656"	"22"	"0.0001991"	"0.002396"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"704.34235"	"1407.67742"	"1407.67758"	"-0.12"	"-0.00008"	"6/80"	"6"	"80"	"466635.08581543"	"HCD"	"MS2"	"23.76887"	"40.7"	"100.000"	"61.3232"	"19952"	"19952"	"19931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.6"	""	"53.9"	""	"47.7"	""	"81.9"	"0.8"	"75.2"	"81.1"	""	"509"	"18"	"34.000"	"27.000"	"0.405217121034523"	"17"	"0.003529"	"0.03905"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34235"	"1407.67742"	"1407.67758"	"-0.12"	"-0.00008"	"7/80"	"7"	"80"	"459139.012268066"	"HCD"	"MS2"	"25.43725"	"37.4"	"100.000"	"60.6855"	"19693"	"19693"	"19673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.3"	""	"40.3"	""	"40.8"	""	"63.8"	""	"85.3"	"91.0"	""	"509"	"19"	"34.000"	"27.000"	"0.303869972586158"	"14"	"0.0001991"	"0.003907"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34235"	"1407.67742"	"1407.67758"	"-0.12"	"-0.00008"	"10/80"	"10"	"80"	"443431.603515625"	"HCD"	"MS2"	"38.84341"	"28.9"	"100.000"	"54.6935"	"17229"	"17229"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.8"	""	"38.0"	""	"34.4"	""	"43.2"	""	"63.8"	"64.7"	""	"509"	"15"	"34.000"	"27.000"	"0.872344016760716"	"13"	"0.004213"	"0.04741"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"704.34241"	"1407.67754"	"1407.67758"	"-0.03"	"-0.00002"	"7/80"	"7"	"80"	"398550.188720703"	"HCD"	"MS2"	"11.73974"	"30.7"	"100.000"	"62.7863"	"20544"	"20544"	"20526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"37.0"	""	"38.9"	""	"43.2"	"1.5"	"66.9"	"62.3"	""	"507"	"19"	"34.000"	"27.000"	"0.341175599753183"	"15"	"0.003568"	"0.0394"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"704.34259"	"1407.67790"	"1407.67758"	"0.23"	"0.00016"	"6/80"	"6"	"80"	"406613.796386719"	"HCD"	"MS2"	"29.80568"	"28.1"	"100.000"	"62.6152"	"20442"	"20442"	"20411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"34.1"	""	"35.3"	""	"42.7"	"0.3"	"61.7"	"59.2"	""	"511"	"28"	"34.000"	"27.000"	"0.0389395478595208"	"17"	"9.9E-05"	"0.0008796"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"704.34265"	"1407.67803"	"1407.67758"	"0.32"	"0.00022"	"7/80"	"7"	"80"	"503932.996276855"	"HCD"	"MS2"	"45.79057"	"42.1"	"100.000"	"60.7617"	"19692"	"19692"	"19663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"43.3"	""	"42.9"	""	"79.3"	"1.7"	"93.2"	"96.3"	""	"512"	"17"	"34.000"	"27.000"	"0.481105105101636"	"19"	"0.0001991"	"0.004508"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTADYAMFR"	"[R].tSTADYAmFR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"P02680"	"Fibrinogen gamma chain OS=Rattus norvegicus OX=10116 GN=Fgg PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.34277"	"1407.67827"	"1407.67758"	"0.49"	"0.00034"	"7/80"	"7"	"80"	"1299374.4942627"	"HCD"	"MS2"	"34.58092"	"68.6"	"100.000"	"50.2472"	"15455"	"15455"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.0"	""	"63.4"	""	"69.1"	""	"205.0"	""	"129.7"	"119.4"	""	"507"	"38"	"34.000"	"27.000"	"0.00361391524978154"	"15"	"9.9E-05"	"0.0008686"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"704.36877"	"1407.73027"	"1407.73173"	"-1.03"	"-0.00073"	"7/86"	"7"	"86"	"2047833.03540039"	"HCD"	"MS2"	"5.705743"	"111.0"	"100.000"	"66.6297"	"22103"	"22103"	"22096"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.5"	""	"137.3"	""	"137.9"	""	"191.6"	""	"209.3"	"197.3"	""	"832"	"48"	"36.000"	"29.000"	"0.000613893917842772"	"17"	"0"	"4.906E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTASPLEEER"	"[R].fTASPLEEER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"704.36896"	"1407.73064"	"1407.73173"	"-0.77"	"-0.00054"	"7/86"	"7"	"86"	"1898776.51867676"	"HCD"	"MS2"	"5.89664"	"102.3"	"100.000"	"66.6400"	"22074"	"22074"	"22063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.8"	""	"126.9"	""	"144.0"	""	"170.0"	"0.7"	"196.5"	"177.3"	""	"832"	"48"	"36.000"	"29.000"	"0.000616727523420716"	"21"	"0"	"4.264E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWEGDDIK"	"[R].sWEGDDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"704.37848"	"1407.74968"	"1407.75202"	"-1.66"	"-0.00117"	"12/66"	"12"	"66"	"920776.106445313"	"HCD"	"MS2"	"22.58316"	"83.8"	"100.000"	"65.3968"	"21571"	"21571"	"21551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.2"	""	"109.3"	""	"121.7"	""	"140.4"	""	"152.4"	"153.5"	""	"911"	"33"	"36.000"	"29.000"	"0.0249165771098204"	"25"	"0.0001686"	"0.001785"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWEGDDIK"	"[R].sWEGDDIk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"O55043"	"Rho guanine nucleotide exchange factor 7 OS=Rattus norvegicus OX=10116 GN=Arhgef7 PE=1 SV=1"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"704.37909"	"1407.75090"	"1407.75202"	"-0.79"	"-0.00056"	"6/66"	"6"	"66"	"748341.099182129"	"HCD"	"MS2"	"25.91177"	"66.5"	"100.000"	"65.3566"	"21588"	"21588"	"21568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.1"	""	"95.1"	""	"85.0"	""	"106.6"	""	"125.5"	"123.4"	""	"879"	"26"	"36.000"	"29.000"	"0.101615247528217"	"29"	"0.0009352"	"0.008255"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFITTVQQR"	"[K].gEFITTVQQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"704.39221"	"1407.77715"	"1407.77934"	"-1.56"	"-0.00110"	"8/84"	"8"	"84"	"1111056.97241211"	"HCD"	"MS2"	"33.57247"	"76.0"	"100.000"	"57.8935"	"18523"	"18523"	"18502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.9"	""	"97.1"	""	"91.6"	""	"118.6"	"0.3"	"149.5"	"149.1"	""	"920"	"34"	"36.000"	"29.000"	"0.0193534249056844"	"18"	"0"	"7.09E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFITTVQQR"	"[K].gEFITTVQQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"704.39246"	"1407.77764"	"1407.77934"	"-1.21"	"-0.00085"	"8/84"	"8"	"84"	"1218827.15100098"	"HCD"	"MS2"	"23.00525"	"73.9"	"100.000"	"58.5032"	"18772"	"18772"	"18750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.2"	""	"101.2"	""	"99.7"	""	"112.7"	""	"134.6"	"140.1"	""	"912"	"40"	"36.000"	"29.000"	"0.00451819366871102"	"21"	"0"	"6.981E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFITTVQQR"	"[K].gEFITTVQQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"704.39252"	"1407.77776"	"1407.77934"	"-1.13"	"-0.00079"	"8/84"	"8"	"84"	"1863686.74975586"	"HCD"	"MS2"	"16.1575"	"110.3"	"100.000"	"58.1951"	"18646"	"18646"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.8"	""	"146.0"	""	"167.2"	""	"167.3"	""	"178.9"	"215.5"	""	"922"	"43"	"36.000"	"29.000"	"0.00255094400348455"	"21"	"0"	"7.504E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQTQLIQR"	"[R].eYQTQLIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"704.39270"	"1407.77812"	"1407.77934"	"-0.87"	"-0.00061"	"6/82"	"6"	"82"	"777418.581542969"	"HCD"	"MS2"	"39.02855"	"61.9"	"100.000"	"50.0215"	"15363"	"15363"	"15339"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"73.1"	""	"81.8"	""	"110.6"	"0.3"	"119.3"	"115.9"	""	"922"	"38"	"36.000"	"29.000"	"0.00660238621565104"	"21"	"0"	"0.0002288"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFITTVQQR"	"[K].gEFITTVQQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"704.39276"	"1407.77825"	"1407.77934"	"-0.78"	"-0.00055"	"8/84"	"8"	"84"	"1339964.17028809"	"HCD"	"MS2"	"22.98436"	"78.1"	"100.000"	"58.1741"	"18673"	"18673"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.3"	""	"109.3"	""	"105.8"	""	"120.0"	""	"137.9"	"155.1"	""	"922"	"42"	"36.000"	"29.000"	"0.00292887559583654"	"21"	"0"	"2.065E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFITTVQQR"	"[K].gEFITTVQQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"704.39288"	"1407.77849"	"1407.77934"	"-0.61"	"-0.00043"	"8/84"	"8"	"84"	"1809701.78753662"	"HCD"	"MS2"	"18.60355"	"109.4"	"100.000"	"57.8657"	"18547"	"18547"	"18530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.4"	""	"148.5"	""	"160.9"	""	"163.3"	"0.7"	"198.1"	"202.8"	""	"912"	"46"	"36.000"	"29.000"	"0.00128518261665659"	"21"	"0"	"2.365E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQTQLIQR"	"[R].eYQTQLIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"704.39294"	"1407.77861"	"1407.77934"	"-0.52"	"-0.00037"	"7/82"	"7"	"82"	"606044.444213867"	"HCD"	"MS2"	"12.87811"	"49.5"	"100.000"	"50.4208"	"15491"	"15491"	"15462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.8"	""	"60.7"	""	"69.0"	""	"83.6"	"1.7"	"98.9"	"87.4"	""	"913"	"40"	"36.000"	"29.000"	"0.00509848072611825"	"21"	"0"	"0.0002437"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFITTVQQR"	"[K].gEFITTVQQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"704.39368"	"1407.78008"	"1407.77934"	"0.52"	"0.00037"	"7/84"	"7"	"84"	"1005480.97192383"	"HCD"	"MS2"	"43.36972"	"69.2"	"100.000"	"57.5757"	"18429"	"18429"	"18403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.1"	""	"81.6"	""	"84.9"	""	"111.5"	"0.1"	"127.5"	"137.4"	""	"939"	"16"	"36.000"	"29.000"	"1.24061091156265"	"21"	"0.0001991"	"0.00453"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"704.40686"	"1407.80644"	"1407.80953"	"-2.19"	"-0.00154"	"8/76"	"8"	"76"	"767671.496887207"	"HCD"	"MS2"	"78.29727"	"69.1"	"100.000"	"39.0631"	"10885"	"10885"	"10857"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.2"	""	"90.1"	""	"88.1"	""	"123.4"	"1.1"	"123.8"	"120.1"	""	"844"	"13"	"36.000"	"29.000"	"2.08599109908445"	"20"	"0.0001991"	"0.002703"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"469.94061"	"1407.80729"	"1407.80953"	"-1.60"	"-0.00075"	"6/76"	"6"	"76"	"5067001.32928467"	"HCD"	"MS2"	"43.4571"	"225.0"	"100.000"	"38.7877"	"10808"	"10808"	"10786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.9"	""	"272.1"	""	"297.7"	""	"365.5"	""	"453.7"	"450.2"	""	"840"	"36"	"36.000"	"29.000"	"0.0114353454939272"	"24"	"0.0001991"	"0.002244"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"704.40735"	"1407.80742"	"1407.80953"	"-1.50"	"-0.00106"	"14/76"	"14"	"76"	"2478168.74041748"	"HCD"	"MS2"	"7.286935"	"177.3"	"100.000"	"38.6865"	"10767"	"10767"	"10738"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"267.0"	""	"221.3"	""	"258.0"	""	"288.3"	""	"317.5"	"328.9"	""	"840"	"43"	"36.000"	"29.000"	"0.00191977039638247"	""	"0"	"8.873E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"469.94067"	"1407.80747"	"1407.80953"	"-1.47"	"-0.00069"	"9/76"	"9"	"76"	"4503758.14916992"	"HCD"	"MS2"	"48.65197"	"238.3"	"100.000"	"38.8638"	"10803"	"10803"	"10781"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"316.7"	""	"284.4"	""	"327.4"	""	"419.8"	""	"458.0"	"459.4"	""	"818"	"25"	"36.000"	"29.000"	"0.119873533730738"	"20"	"0.001103"	"0.008921"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVVESSEK"	"[R].aTVVESSEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.5349"	"0.0000"	"1"	"1"	"1"	"704.40741"	"1407.80754"	"1407.80953"	"-1.41"	"-0.00099"	"14/76"	"14"	"76"	"2015565.35827637"	"HCD"	"MS2"	"0"	"150.6"	"100.000"	"38.7556"	"10759"	"10759"	"10734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.3"	""	"193.3"	""	"210.4"	""	"240.1"	"0.2"	"257.4"	"284.1"	""	"779"	"43"	"35.000"	"28.000"	"0.00177217849428444"	""	"0"	"0.0001421"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVVFGVEK"	"[K].dGVVFGVEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"704.41528"	"1407.82329"	"1407.82479"	"-1.06"	"-0.00075"	"8/78"	"8"	"78"	"611463.454162598"	"HCD"	"MS2"	"36.5024"	"48.0"	"100.000"	"87.2192"	"30437"	"30437"	"30419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.8"	""	"58.5"	""	"62.1"	""	"74.1"	""	"93.4"	"100.6"	""	"728"	"42"	"35.000"	"28.000"	"0.00238836876934258"	"28"	"0"	"2.869E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVVFGVEK"	"[K].dGVVFGVEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"704.41589"	"1407.82451"	"1407.82479"	"-0.20"	"-0.00014"	"8/78"	"8"	"78"	"427220.971679688"	"HCD"	"MS2"	"47.42062"	"33.3"	"100.000"	"87.2291"	"30407"	"30407"	"30391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"40.1"	""	"46.8"	""	"48.9"	""	"66.7"	"62.3"	""	"735"	"26"	"35.000"	"28.000"	"0.0916763562151536"	"21"	"0"	"0.000139"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVVFGVEK"	"[K].dGVVFGVEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"704.41669"	"1407.82610"	"1407.82479"	"0.93"	"0.00066"	"8/78"	"8"	"78"	"1481616.840271"	"HCD"	"MS2"	"13.71654"	"119.9"	"100.000"	"87.5199"	"30523"	"30523"	"30508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.0"	""	"142.1"	""	"140.7"	""	"162.0"	""	"267.6"	"285.2"	""	"723"	"30"	"35.000"	"28.000"	"0.0374203893254583"	"22"	"9.9E-05"	"0.0006028"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.84814"	"1408.68901"	"1408.69059"	"-1.12"	"-0.00079"	"9/106"	"9"	"106"	"382287.119140625"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"29.7136"	"7147"	"7147"	"7130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"11.3"	""	"6.7"	""	"17.5"	""	"25.2"	"24.5"	""	"509"	"37"	"34.000"	"27.000"	"0.00551680694676612"	"15"	"9.9E-05"	"0.001006"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTAAPTDPTDGP"	"[R].hTAAPTDPTDGP.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"Q6P742"	"Proteolipid protein 2 OS=Rattus norvegicus OX=10116 GN=Plp2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.84918"	"1408.69109"	"1408.69059"	"0.35"	"0.00025"	"11/106"	"11"	"106"	"395329.940490723"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"29.8499"	"7163"	"7163"	"7141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"11.8"	""	"9.7"	""	"13.5"	""	"17.2"	"23.8"	""	"541"	"38"	"34.000"	"27.000"	"0.00453072047965151"	"15"	"9.9E-05"	"0.0005766"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPFDYNGPR"	"[K].gRPFDYnGPR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"470.24280"	"1408.71384"	"1408.71708"	"-2.30"	"-0.00108"	"8/88"	"8"	"88"	"1665560.18395996"	"HCD"	"MS2"	"45.75237"	"66.9"	"100.000"	"40.9260"	"11638"	"11638"	"11611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.3"	""	"74.2"	""	"82.8"	""	"123.4"	"0.2"	"146.7"	"123.5"	""	"691"	"24"	"35.000"	"28.000"	"0.13287646069667"	"15"	"0.001261"	"0.009607"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GRPFDYNGPR"	"[K].gRPFDYnGPR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"470.24344"	"1408.71576"	"1408.71708"	"-0.93"	"-0.00044"	"7/88"	"7"	"88"	"1579546.8616333"	"HCD"	"MS2"	"66.92211"	"67.4"	"100.000"	"40.7869"	"11616"	"11616"	"11595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.1"	""	"72.9"	""	"86.7"	""	"110.7"	""	"143.0"	"128.5"	""	"724"	"25"	"35.000"	"28.000"	"0.109322252278553"	"24"	"0.0001686"	"0.001596"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQESLEFGK"	"[M].aEQESLEFGk.[A]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"704.86200"	"1408.71672"	"1408.71574"	"0.70"	"0.00049"	"4/96"	"4"	"96"	"147154.426818848"	"HCD"	"MS2"	"48.20699"	"11.6"	"100.000"	"91.9323"	"32337"	"32337"	"32310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"17.4"	""	"16.6"	""	"19.7"	""	"22.3"	"22.2"	""	"726"	"13"	"35.000"	"28.000"	"1.87027997983177"	"15"	"0.0005161"	"0.006772"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTFTVAQNER"	"[K].nTFTVAQNER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"704.87177"	"1408.73625"	"1408.73821"	"-1.39"	"-0.00098"	"8/104"	"8"	"104"	"752362.912109375"	"HCD"	"MS2"	"20.26743"	"59.9"	"100.000"	"38.9850"	"10889"	"10889"	"10861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.6"	""	"81.6"	""	"75.3"	""	"93.5"	""	"117.3"	"110.0"	""	"854"	"14"	"36.000"	"29.000"	"1.67659387415629"	"21"	"0.0001991"	"0.003085"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQITAGR"	"[K].yEELQITAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"704.88513"	"1408.76299"	"1408.76336"	"-0.26"	"-0.00019"	"9/92"	"9"	"92"	"1068069.84942627"	"HCD"	"MS2"	"24.72065"	"63.1"	"100.000"	"71.1954"	"23924"	"23924"	"23902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.4"	""	"81.7"	""	"103.3"	""	"86.3"	""	"119.9"	"103.1"	""	"940"	"27"	"36.000"	"29.000"	"0.0970728673230948"	"26"	"0.0001686"	"0.001106"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELQITAGR"	"[K].yEELQITAGR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"Q4FZU2"	"Keratin, type II cytoskeletal 6A OS=Rattus norvegicus OX=10116 GN=Krt6a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.88519"	"1408.76311"	"1408.76336"	"-0.18"	"-0.00013"	"9/92"	"9"	"92"	"1258769.39703369"	"HCD"	"MS2"	"20.59464"	"67.3"	"100.000"	"71.3403"	"24014"	"24014"	"23996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.6"	""	"103.4"	""	"104.3"	""	"87.5"	""	"108.1"	"111.0"	""	"940"	"31"	"36.000"	"29.000"	"0.0354077114954847"	"14"	"0"	"0.000255"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFLDEK"	"[K].gEIFLDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"704.90619"	"1408.80510"	"1408.80880"	"-2.63"	"-0.00185"	"7/66"	"7"	"66"	"415869.153686523"	"HCD"	"MS2"	"39.67089"	"38.2"	"100.000"	"90.2301"	"31613"	"31613"	"31595"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.5"	""	"51.6"	""	"57.7"	""	"56.2"	"0.3"	"68.0"	"76.7"	""	"792"	"38"	"35.000"	"28.000"	"0.00655684905533933"	"26"	"0.0001686"	"0.001579"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFLDEK"	"[K].gEIFLDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"704.90796"	"1408.80864"	"1408.80880"	"-0.11"	"-0.00008"	"14/66"	"14"	"66"	"2156449.50762939"	"HCD"	"MS2"	"4.535496"	"181.7"	"100.000"	"90.5136"	"31726"	"31726"	"31716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.0"	""	"244.8"	""	"260.0"	""	"263.8"	""	"322.5"	"382.4"	""	"791"	"46"	"35.000"	"28.000"	"0.00110699711191539"	"28"	"9.9E-05"	"0.0009071"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFLDEK"	"[K].gEIFLDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"704.90796"	"1408.80864"	"1408.80880"	"-0.11"	"-0.00008"	"14/66"	"14"	"66"	"2244794.83233643"	"HCD"	"MS2"	"4.313362"	"193.5"	"100.000"	"90.4411"	"31735"	"31735"	"31726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"256.0"	""	"253.0"	""	"282.0"	""	"290.1"	""	"341.3"	"416.3"	""	"791"	"44"	"35.000"	"28.000"	"0.00167937037540767"	"27"	"0.0001686"	"0.001144"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFLDEK"	"[K].gEIFLDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"704.90839"	"1408.80950"	"1408.80880"	"0.49"	"0.00035"	"7/66"	"7"	"66"	"443070.909484863"	"HCD"	"MS2"	"48.70642"	"43.2"	"100.000"	"90.1529"	"31620"	"31620"	"31600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.9"	""	"55.4"	""	"64.6"	""	"62.9"	""	"77.1"	"90.4"	""	"789"	"43"	"35.000"	"28.000"	"0.00182409312942008"	"26"	"9.9E-05"	"0.0005406"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFLDEK"	"[K].gEIFLDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"704.90869"	"1408.81011"	"1408.80880"	"0.93"	"0.00065"	"7/66"	"7"	"66"	"790559.149169922"	"HCD"	"MS2"	"10.76704"	"71.1"	"100.000"	"90.7296"	"31851"	"31851"	"31837"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.6"	""	"98.3"	""	"103.9"	""	"97.0"	""	"134.9"	"149.8"	""	"790"	"43"	"35.000"	"28.000"	"0.00193017681940419"	"26"	"9.9E-05"	"0.0008966"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEIFLDEK"	"[K].gEIFLDEk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"704.90906"	"1408.81084"	"1408.80880"	"1.45"	"0.00102"	"7/66"	"7"	"66"	"909328.325073242"	"HCD"	"MS2"	"10.03526"	"78.8"	"100.000"	"90.8021"	"31842"	"31842"	"31831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.3"	""	"107.3"	""	"111.5"	""	"110.9"	""	"148.5"	"170.7"	""	"775"	"40"	"35.000"	"28.000"	"0.00389288618732878"	"25"	"0.0001991"	"0.00207"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAPVPLANAVVQ"	"[R].tAPVPLANAVVQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.92139"	"1408.83550"	"1408.83613"	"-0.45"	"-0.00032"	"5/96"	"5"	"96"	"261534.813842773"	"HCD"	"MS2"	"38.77134"	"6.4"	"100.000"	"104.2485"	"37298"	"37298"	"37273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.3"	""	"12.0"	""	"8.1"	""	"10.9"	""	"9.6"	"12.8"	""	"579"	"38"	"34.000"	"27.000"	"0.00454620031854563"	"15"	"0.0001991"	"0.00541"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAPVPLANAVVQ"	"[R].tAPVPLANAVVQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.92145"	"1408.83562"	"1408.83613"	"-0.36"	"-0.00026"	"5/96"	"5"	"96"	"258371.650085449"	"HCD"	"MS2"	"39.49495"	"6.4"	"100.000"	"104.0156"	"37187"	"37187"	"37165"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"7.8"	""	"11.8"	""	"8.0"	""	"9.6"	"11.0"	""	"579"	"35"	"34.000"	"27.000"	"0.0100843652702925"	"15"	"0.0001991"	"0.002824"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAPVPLANAVVQ"	"[R].tAPVPLANAVVQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.92163"	"1408.83599"	"1408.83613"	"-0.10"	"-0.00007"	"8/96"	"8"	"96"	"356088.326843262"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"104.5283"	"37410"	"37410"	"37398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"7.0"	""	"6.5"	""	"6.2"	""	"12.2"	"12.3"	""	"579"	"46"	"34.000"	"27.000"	"0.000686512687789049"	"16"	"0.0001686"	"0.001429"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAPVPLANAVVQ"	"[R].tAPVPLANAVVQ.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"Q641W2"	"UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Myg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.92169"	"1408.83611"	"1408.83613"	"-0.02"	"-0.00001"	"8/96"	"8"	"96"	"407818.156433105"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"104.2886"	"37296"	"37296"	"37286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.1"	""	"9.2"	""	"6.7"	""	"10.2"	""	"10.9"	"11.7"	""	"579"	"44"	"34.000"	"27.000"	"0.00104147432527587"	"15"	"0.0001686"	"0.001608"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"705.36401"	"1409.72075"	"1409.72222"	"-1.04"	"-0.00074"	"10/90"	"10"	"90"	"3146303.42071533"	"HCD"	"MS2"	"12.07233"	"163.0"	"100.000"	"54.8424"	"17323"	"17323"	"17306"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.7"	""	"225.0"	""	"209.0"	""	"257.1"	"1.4"	"310.9"	"308.1"	""	"769"	"50"	"35.000"	"28.000"	"0.000399849303761273"	"23"	"0"	"9.349E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"705.36426"	"1409.72124"	"1409.72222"	"-0.70"	"-0.00049"	"7/90"	"7"	"90"	"4321492.4630127"	"HCD"	"MS2"	"0.6148782"	"229.8"	"100.000"	"55.1391"	"17444"	"17444"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"321.8"	""	"296.6"	""	"318.0"	""	"360.3"	"2.2"	"444.1"	"435.8"	""	"767"	"51"	"35.000"	"28.000"	"0.000331715196850478"	"26"	"0"	"9.207E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"705.36438"	"1409.72148"	"1409.72222"	"-0.53"	"-0.00037"	"7/90"	"7"	"90"	"3020257.14593506"	"HCD"	"MS2"	"9.2239"	"153.3"	"100.000"	"55.2058"	"17437"	"17437"	"17418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"222.6"	""	"186.9"	""	"204.2"	""	"244.2"	"0.1"	"304.7"	"290.6"	""	"773"	"54"	"35.000"	"28.000"	"0.0001567290489508"	"23"	"0"	"4.3E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTDEFTLNR"	"[K].gAGTDEFTLNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"705.36444"	"1409.72161"	"1409.72222"	"-0.44"	"-0.00031"	"10/90"	"10"	"90"	"4028758.22698975"	"HCD"	"MS2"	"1.015164"	"217.1"	"100.000"	"55.5073"	"17561"	"17561"	"17544"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.5"	""	"282.5"	""	"284.7"	""	"330.6"	"1.0"	"400.6"	"423.6"	""	"775"	"48"	"35.000"	"28.000"	"0.000602936682246966"	"25"	"0"	"2.653E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEDLYEAR"	"[R].lTAEDLYEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"705.37628"	"1409.74529"	"1409.74738"	"-1.48"	"-0.00104"	"13/84"	"13"	"84"	"1232112.98931885"	"HCD"	"MS2"	"2.586501"	"73.3"	"100.000"	"83.4338"	"28911"	"28911"	"28894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.8"	""	"108.1"	""	"109.7"	""	"96.0"	"1.7"	"118.9"	"132.7"	""	"863"	"44"	"36.000"	"29.000"	"0.00178229997108754"	"22"	"0"	"4.056E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTAEDLYEAR"	"[R].lTAEDLYEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"705.37683"	"1409.74639"	"1409.74738"	"-0.70"	"-0.00049"	"7/84"	"7"	"84"	"1231956.97302246"	"HCD"	"MS2"	"4.050468"	"76.7"	"100.000"	"83.3931"	"28866"	"28866"	"28848"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.9"	""	"119.8"	""	"122.6"	""	"81.2"	"1.6"	"131.4"	"143.7"	""	"859"	"38"	"36.000"	"29.000"	"0.00716082677790681"	""	"0"	"5.141E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"705.37701"	"1409.74675"	"1409.74738"	"-0.44"	"-0.00031"	"6/86"	"6"	"86"	"439092.05291748"	"HCD"	"MS2"	"14.39375"	"22.4"	"100.000"	"101.7612"	"36279"	"36279"	"36264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.0"	""	"34.3"	""	"30.5"	""	"30.4"	""	"45.6"	"40.8"	""	"868"	"40"	"36.000"	"29.000"	"0.00416379874077915"	"25"	"9.9E-05"	"0.0007216"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8033"	"0.0000"	"1"	"1"	"1"	"705.37714"	"1409.74700"	"1409.74738"	"-0.27"	"-0.00019"	"7/86"	"7"	"86"	"1643097.42541504"	"HCD"	"MS2"	"9.172179"	"75.3"	"100.000"	"101.6439"	"36257"	"36257"	"36240"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.9"	""	"99.3"	""	"91.3"	""	"106.5"	"0.5"	"136.2"	"148.2"	""	"868"	"61"	"36.000"	"29.000"	"3.73671288448117E-05"	"28"	"0"	"6.084E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"705.37732"	"1409.74736"	"1409.74738"	"-0.01"	"-0.00001"	"7/86"	"7"	"86"	"1721736.8862915"	"HCD"	"MS2"	"7.890059"	"73.8"	"100.000"	"101.4801"	"36165"	"36165"	"36150"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.7"	""	"86.3"	""	"86.5"	""	"108.2"	""	"146.3"	"148.7"	""	"860"	"53"	"36.000"	"29.000"	"0.000199741568345782"	"25"	"0"	"1E-05"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLDSYIDGR"	"[K].eLLDSYIDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"705.37744"	"1409.74761"	"1409.74738"	"0.16"	"0.00012"	"8/86"	"8"	"86"	"415377.441223145"	"HCD"	"MS2"	"10.63306"	"22.4"	"100.000"	"101.9182"	"36367"	"36367"	"36355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.5"	""	"29.0"	""	"27.1"	""	"35.3"	"1.2"	"42.2"	"46.2"	""	"859"	"34"	"36.000"	"29.000"	"0.0155225536003714"	"20"	"0"	"9.68E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGLIYEETR"	"[R].iSGLIYEETR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.6200"	"0.0000"	"1"	"1"	"1"	"705.39526"	"1409.78325"	"1409.78376"	"-0.36"	"-0.00026"	"8/86"	"8"	"86"	"1281440.89727783"	"HCD"	"MS2"	"0.9613859"	"66.6"	"100.000"	"94.9776"	"33531"	"33531"	"33516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"19.4"	""	"35.2"	""	"92.3"	""	"224.0"	"234.2"	""	"839"	"50"	"36.000"	"29.000"	"0.000378209092225699"	""	"0"	"1.334E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGLIYEETR"	"[R].iSGLIYEETR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.6481"	"0.0000"	"1"	"1"	"1"	"705.39551"	"1409.78374"	"1409.78376"	"-0.02"	"-0.00001"	"8/86"	"8"	"86"	"1303529.61663818"	"HCD"	"MS2"	"0"	"66.5"	"100.000"	"94.6688"	"33405"	"33405"	"33393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"27.6"	""	"29.8"	""	"107.3"	"1.3"	"218.5"	"221.7"	""	"837"	"54"	"36.000"	"29.000"	"0.000154773093238041"	""	"0"	"1.821E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGLIYEETR"	"[R].iSGLIYEETR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"705.39563"	"1409.78398"	"1409.78376"	"0.16"	"0.00011"	"8/86"	"8"	"86"	"1166903.59222412"	"HCD"	"MS2"	"2.959874"	"57.5"	"100.000"	"94.6335"	"33425"	"33425"	"33413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"23.3"	""	"28.5"	""	"92.4"	"0.6"	"186.0"	"195.3"	""	"838"	"56"	"36.000"	"29.000"	"0.000102615749833295"	""	"0"	"1.652E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISGLIYEETR"	"[R].iSGLIYEETR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"705.39581"	"1409.78435"	"1409.78376"	"0.42"	"0.00029"	"8/86"	"8"	"86"	"1376161.01330566"	"HCD"	"MS2"	"0"	"68.4"	"100.000"	"94.9402"	"33549"	"33549"	"33536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.8"	""	"25.7"	""	"30.3"	""	"99.6"	"0.4"	"229.3"	"238.2"	""	"833"	"56"	"36.000"	"29.000"	"0.000100141710620289"	""	"0"	"9.645E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQTSIATAYR"	"[K].aVQTSIATAYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"Q5FVC7"	"Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Acap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"705.40143"	"1409.79558"	"1409.79499"	"0.42"	"0.00029"	"7/104"	"7"	"104"	"459159.425048828"	"HCD"	"MS2"	"31.75405"	"36.2"	"100.000"	"54.3210"	"17077"	"17077"	"17053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"51.7"	""	"46.9"	""	"49.2"	""	"79.0"	"69.7"	""	"824"	"32"	"36.000"	"29.000"	"0.0239826525721599"	"16"	"0"	"0.0001257"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGYIQDK"	"[K].vEGYIQDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"705.40442"	"1409.80156"	"1409.80405"	"-1.77"	"-0.00125"	"12/70"	"12"	"70"	"430992.21295166"	"HCD"	"MS2"	"36.88186"	"42.8"	"100.000"	"68.6049"	"22905"	"22905"	"22874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.0"	""	"56.1"	""	"54.2"	""	"69.9"	""	"88.2"	"77.2"	""	"771"	"38"	"35.000"	"28.000"	"0.00610976325693759"	"26"	"0.0001991"	"0.002732"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASVSEPAK"	"[K].yASVSEPAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"470.60559"	"1409.80222"	"1409.80405"	"-1.30"	"-0.00061"	"6/70"	"6"	"70"	"1604020.9864502"	"HCD"	"MS2"	"71.88723"	"91.6"	"100.000"	"46.1853"	"13809"	"13809"	"13793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.0"	""	"111.6"	""	"121.3"	""	"154.8"	"2.8"	"166.4"	"161.0"	""	"771"	"9"	"35.000"	"28.000"	"4.69920490385536"	"13"	"0.001615"	"0.01483"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYVLEGK"	"[R].aDGYVLEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"705.40491"	"1409.80254"	"1409.80405"	"-1.07"	"-0.00076"	"8/74"	"8"	"74"	"3483362.39178467"	"HCD"	"MS2"	"0"	"270.0"	"100.000"	"69.5403"	"23285"	"23285"	"23271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"463.0"	""	"369.1"	""	"433.9"	""	"412.3"	"1.7"	"470.3"	"402.4"	""	"775"	"45"	"35.000"	"28.000"	"0.00112530877860497"	"24"	"9.9E-05"	"0.0005541"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQFTEEK"	"[R].aVQFTEEk.[LF]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2; Q5PPJ9"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1; Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"705.40497"	"1409.80266"	"1409.80405"	"-0.99"	"-0.00070"	"7/70"	"7"	"70"	"1707119.08148193"	"HCD"	"MS2"	"8.440902"	"143.8"	"100.000"	"58.8739"	"18923"	"18923"	"18901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.4"	""	"168.8"	""	"191.5"	""	"236.0"	""	"291.1"	"269.0"	""	"776"	"43"	"35.000"	"28.000"	"0.00184005890280975"	"22"	"0.0001686"	"0.001778"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYVLEGK"	"[R].aDGYVLEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"705.40497"	"1409.80266"	"1409.80405"	"-0.99"	"-0.00070"	"8/74"	"8"	"74"	"4310853.58044434"	"HCD"	"MS2"	"0"	"344.8"	"100.000"	"69.2571"	"23170"	"23170"	"23152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"555.6"	""	"489.4"	""	"501.8"	""	"568.7"	""	"630.9"	"516.9"	""	"776"	"43"	"35.000"	"28.000"	"0.0021668643555789"	"23"	"9.9E-05"	"0.0006906"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"470.60574"	"1409.80268"	"1409.80405"	"-0.98"	"-0.00046"	"6/68"	"6"	"68"	"3966032.15246582"	"HCD"	"MS2"	"20.90078"	"136.5"	"100.000"	"47.1561"	"14200"	"14200"	"14177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.6"	""	"156.3"	""	"168.5"	""	"205.3"	""	"255.8"	"318.1"	""	"776"	"33"	"35.000"	"28.000"	"0.020884867561632"	"25"	"0.0001991"	"0.002196"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASVSEPAK"	"[K].yASVSEPAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"705.40509"	"1409.80290"	"1409.80405"	"-0.81"	"-0.00057"	"7/70"	"7"	"70"	"621910.473571777"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"46.4672"	"13888"	"13888"	"13867"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.5"	""	"80.0"	""	"74.3"	""	"75.3"	""	"95.2"	"102.2"	""	"766"	"41"	"35.000"	"28.000"	"0.00282617320139446"	"24"	"0"	"9.036E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYVLEGK"	"[R].aDGYVLEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"705.40509"	"1409.80290"	"1409.80405"	"-0.81"	"-0.00057"	"8/74"	"8"	"74"	"4269668.81005859"	"HCD"	"MS2"	"1.444629"	"323.1"	"100.000"	"69.1984"	"23112"	"23112"	"23092"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"521.3"	""	"478.0"	""	"483.0"	""	"521.3"	""	"567.2"	"487.8"	""	"766"	"44"	"35.000"	"28.000"	"0.00169121481336319"	"24"	"9.9E-05"	"0.0009249"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"470.60583"	"1409.80295"	"1409.80405"	"-0.78"	"-0.00037"	"6/68"	"6"	"68"	"4766274.59088135"	"HCD"	"MS2"	"9.660948"	"162.9"	"100.000"	"47.5564"	"14325"	"14325"	"14303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.3"	""	"188.8"	""	"202.9"	""	"231.3"	""	"289.1"	"402.1"	""	"766"	"36"	"35.000"	"28.000"	"0.00871362315985703"	"27"	"0.0001686"	"0.001759"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"705.40533"	"1409.80339"	"1409.80405"	"-0.47"	"-0.00033"	"7/68"	"7"	"68"	"3685039.78088379"	"HCD"	"MS2"	"3.368028"	"302.6"	"100.000"	"47.3770"	"14252"	"14252"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"425.5"	""	"379.7"	""	"374.3"	""	"473.4"	""	"495.2"	"722.0"	""	"783"	"44"	"35.000"	"28.000"	"0.00150567682670756"	"28"	"0.0001686"	"0.001956"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YASVSEPAK"	"[K].yASVSEPAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"705.40546"	"1409.80364"	"1409.80405"	"-0.29"	"-0.00021"	"8/70"	"8"	"70"	"767326.48034668"	"HCD"	"MS2"	"0"	"62.7"	"100.000"	"46.1509"	"13795"	"13795"	"13779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.8"	""	"90.8"	""	"93.8"	""	"85.0"	""	"109.9"	"104.4"	""	"783"	"53"	"35.000"	"28.000"	"0.000183540439109871"	"20"	"0"	"1.101E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEGYIQDK"	"[K].vEGYIQDk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"Q8K4M9"	"Oxysterol-binding protein-related protein 1 OS=Rattus norvegicus OX=10116 GN=Osbpl1a PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"705.40552"	"1409.80376"	"1409.80405"	"-0.21"	"-0.00015"	"7/70"	"7"	"70"	"380190.104125977"	"HCD"	"MS2"	"30.80237"	"36.0"	"100.000"	"68.4540"	"22811"	"22811"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"39.9"	""	"49.6"	""	"64.6"	""	"63.7"	"69.9"	""	"783"	"46"	"35.000"	"28.000"	"0.000898942195735989"	"27"	"0"	"0.000193"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVQFTEEK"	"[R].aVQFTEEk.[LF]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2; Q5PPJ9"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1; Endophilin-B2 OS=Rattus norvegicus OX=10116 GN=Sh3glb2 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"705.40558"	"1409.80388"	"1409.80405"	"-0.12"	"-0.00009"	"7/70"	"7"	"70"	"1301078.16461182"	"HCD"	"MS2"	"7.63725"	"113.6"	"100.000"	"58.5909"	"18843"	"18843"	"18827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.9"	""	"163.9"	""	"153.1"	""	"191.6"	""	"227.5"	"189.0"	""	"783"	"42"	"35.000"	"28.000"	"0.00234278139466115"	"22"	"9.9E-05"	"0.001009"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"705.40564"	"1409.80400"	"1409.80405"	"-0.03"	"-0.00002"	"7/68"	"7"	"68"	"11282682.2953491"	"HCD"	"MS2"	"0"	"756.7"	"88.119"	"47.2964"	"14258"	"14258"	"14241"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1055.2"	""	"851.5"	""	"881.5"	""	"1144.2"	""	"1361.2"	"1897.4"	""	"783"	"44"	"35.000"	"28.000"	"0.00148501816617196"	"28"	"0.0001991"	"0.002984"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYVLEGK"	"[R].aDGYVLEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"705.40601"	"1409.80474"	"1409.80405"	"0.48"	"0.00034"	"8/74"	"8"	"74"	"3131580.04992676"	"HCD"	"MS2"	"0"	"249.8"	"100.000"	"69.4833"	"23228"	"23228"	"23212"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"392.5"	""	"346.5"	""	"400.2"	""	"396.6"	""	"445.9"	"382.1"	""	"785"	"45"	"35.000"	"28.000"	"0.00112937887778375"	"24"	"0"	"0.0002296"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQEEYIK"	"[K].aAQEEYIk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"705.40613"	"1409.80498"	"1409.80405"	"0.66"	"0.00046"	"7/68"	"7"	"68"	"2013069.81988525"	"HCD"	"MS2"	"9.978703"	"167.7"	"100.000"	"47.0042"	"14138"	"14138"	"14113"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"256.6"	""	"184.0"	""	"206.5"	""	"266.9"	"0.7"	"282.1"	"392.9"	""	"783"	"41"	"35.000"	"28.000"	"0.00306007285496331"	"26"	"0.0001686"	"0.00136"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADGYVLEGK"	"[R].aDGYVLEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"705.41632"	"1409.82536"	"1409.80405"	"15.12"	"0.01066"	"6/74"	"6"	"74"	"993549.239074707"	"HCD"	"MS2"	"29.42591"	"62.9"	"100.000"	"69.8468"	"23410"	"23410"	"23388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.4"	""	"88.7"	""	"95.5"	""	"81.3"	"0.2"	"124.6"	"116.9"	""	"674"	"30"	"35.000"	"28.000"	"0.0351260973705544"	"18"	"0.004213"	"0.04741"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.41791"	"1409.82854"	"1409.83138"	"-2.02"	"-0.00142"	"7/98"	"7"	"98"	"1149257.32550049"	"HCD"	"MS2"	"22.42716"	"68.9"	"100.000"	"66.3238"	"21949"	"21949"	"21938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.8"	""	"92.4"	""	"101.1"	""	"106.5"	"0.2"	"105.0"	"135.8"	""	"673"	"48"	"35.000"	"28.000"	"0.000500017343629578"	"16"	"0"	"1.028E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"705.41803"	"1409.82878"	"1409.83138"	"-1.84"	"-0.00130"	"5/98"	"5"	"98"	"693559.290649414"	"HCD"	"MS2"	"47.78666"	"54.5"	"100.000"	"66.2791"	"21965"	"21965"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.9"	""	"72.3"	""	"74.2"	""	"80.8"	""	"108.5"	"100.2"	""	"673"	"21"	"35.000"	"28.000"	"0.289058049986566"	"19"	"0.003568"	"0.03968"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.41846"	"1409.82964"	"1409.83138"	"-1.24"	"-0.00087"	"6/98"	"6"	"98"	"463172.060119629"	"HCD"	"MS2"	"33.46416"	"30.1"	"100.000"	"66.9224"	"22189"	"22189"	"22164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"41.5"	""	"38.8"	""	"44.8"	""	"61.0"	"68.3"	""	"652"	"33"	"35.000"	"28.000"	"0.0176692290270929"	"15"	"9.9E-05"	"0.0004945"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.41852"	"1409.82976"	"1409.83138"	"-1.15"	"-0.00081"	"7/98"	"7"	"98"	"2770797.41864014"	"HCD"	"MS2"	"19.94718"	"123.2"	"100.000"	"66.6171"	"22065"	"22065"	"22051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"192.5"	""	"192.0"	""	"196.8"	""	"177.3"	""	"194.8"	"210.9"	""	"654"	"41"	"35.000"	"28.000"	"0.00260344107586463"	"15"	"0"	"2.609E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"705.41864"	"1409.83000"	"1409.83138"	"-0.98"	"-0.00069"	"9/98"	"9"	"98"	"950435.183288574"	"HCD"	"MS2"	"11.12685"	"53.6"	"100.000"	"66.8502"	"22191"	"22191"	"22175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.9"	""	"63.4"	""	"74.1"	""	"75.6"	"0.4"	"101.7"	"106.1"	""	"654"	"55"	"35.000"	"28.000"	"9.5180449760778E-05"	"19"	"0"	"1.908E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLAPEQPVTLR"	"[R].gLAPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"705.41882"	"1409.83037"	"1409.83138"	"-0.72"	"-0.00051"	"9/98"	"9"	"98"	"2978921.80792236"	"HCD"	"MS2"	"18.90091"	"129.5"	"100.000"	"66.5678"	"22079"	"22079"	"22066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.8"	""	"195.5"	""	"185.7"	""	"205.6"	""	"224.2"	"209.4"	""	"654"	"56"	"35.000"	"28.000"	"8.54176762888541E-05"	"22"	"0"	"1.651E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNWTGEFSAR"	"[K].nNWTGEFSAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"705.85138"	"1410.69548"	"1410.69634"	"-0.61"	"-0.00043"	"7/98"	"7"	"98"	"561502.876953125"	"HCD"	"MS2"	"22.76581"	"44.9"	"100.000"	"64.7777"	"21319"	"21319"	"21295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.2"	""	"56.1"	""	"63.2"	""	"70.1"	""	"86.4"	"84.7"	""	"590"	"28"	"34.000"	"27.000"	"0.0477333611104704"	"18"	"0"	"0.0003151"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNWTGEFSAR"	"[K].nNWTGEFSAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"Q6P7Q1"	"BRISC and BRCA1-A complex member 2 OS=Rattus norvegicus OX=10116 GN=Babam2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"705.85321"	"1410.69914"	"1410.69634"	"1.99"	"0.00140"	"11/98"	"11"	"98"	"411278.646850586"	"HCD"	"MS2"	"48.24422"	"39.0"	"100.000"	"64.6892"	"21317"	"21317"	"21291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.2"	""	"54.5"	""	"55.4"	""	"49.2"	"0.7"	"74.9"	"81.7"	""	"591"	"10"	"34.000"	"27.000"	"3.12289573972636"	"15"	"0.005392"	"0.06832"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPSTSYTPSR"	"[R].vSPSTSYTPSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"B1H268"	"Mini-chromosome maintenance complex-binding protein OS=Rattus norvegicus OX=10116 GN=Mcmbp PE=2 SV=1"	"B1H268"	"Mini-chromosome maintenance complex-binding protein OS=Rattus norvegicus OX=10116 GN=Mcmbp PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.87427"	"1410.74126"	"1410.74262"	"-0.97"	"-0.00068"	"4/96"	"4"	"96"	"216443.149230957"	"HCD"	"MS2"	"21.47692"	"16.2"	"100.000"	"38.3443"	"10627"	"10627"	"10596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"16.7"	""	"20.5"	""	"24.8"	""	"32.9"	"33.0"	""	"748"	"10"	"35.000"	"28.000"	"4.13877295207647"	"13"	"0.007717"	"0.09831"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGHWEEAAR"	"[R].lLGHWEEAAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"470.92703"	"1410.76654"	"1410.76911"	"-1.82"	"-0.00086"	"7/74"	"7"	"74"	"2035178.77490234"	"HCD"	"MS2"	"7.80711"	"33.9"	"100.000"	"66.3893"	"22008"	"22008"	"21998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.3"	""	"44.6"	""	"39.9"	""	"67.1"	"1.6"	"55.4"	"62.0"	""	"792"	"46"	"35.000"	"28.000"	"0.00102966318701345"	"18"	"0"	"2.684E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGHWEEAAR"	"[R].lLGHWEEAAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"470.92740"	"1410.76764"	"1410.76911"	"-1.04"	"-0.00049"	"9/74"	"9"	"74"	"5902141.66387939"	"HCD"	"MS2"	"2.392565"	"81.3"	"100.000"	"66.1289"	"21870"	"21870"	"21849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.2"	""	"95.3"	""	"112.2"	""	"154.6"	"1.3"	"138.3"	"155.9"	""	"795"	"54"	"35.000"	"29.000"	"0.000143660420399246"	"20"	"0"	"1.352E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLGHWEEAAR"	"[R].lLGHWEEAAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"470.92767"	"1410.76847"	"1410.76911"	"-0.46"	"-0.00022"	"9/74"	"9"	"74"	"4497461.98492432"	"HCD"	"MS2"	"3.393737"	"67.9"	"100.000"	"66.1210"	"21900"	"21900"	"21878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"88.2"	""	"94.2"	""	"132.3"	"3.5"	"114.1"	"124.9"	""	"801"	"54"	"36.000"	"29.000"	"0.000145078320865888"	"21"	"0"	"1.199E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"705.90240"	"1410.79753"	"1410.79930"	"-1.25"	"-0.00088"	"8/76"	"8"	"76"	"2152822.38574219"	"HCD"	"MS2"	"0"	"168.5"	"100.000"	"46.6803"	"14006"	"14006"	"13993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.2"	""	"215.8"	""	"214.4"	""	"244.1"	""	"319.8"	"314.6"	""	"697"	"52"	"35.000"	"28.000"	"0.000197789294984879"	""	"0"	"3.634E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"705.90265"	"1410.79802"	"1410.79930"	"-0.91"	"-0.00064"	"8/76"	"8"	"76"	"2718770.01068115"	"HCD"	"MS2"	"0"	"211.1"	"100.000"	"46.6818"	"13971"	"13971"	"13962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"374.9"	""	"303.3"	""	"294.2"	""	"299.1"	"1.2"	"356.7"	"366.8"	""	"698"	"50"	"35.000"	"28.000"	"0.000352229257240763"	"26"	"0"	"6.18E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"705.90283"	"1410.79839"	"1410.79930"	"-0.65"	"-0.00046"	"8/76"	"8"	"76"	"3697159.80871582"	"HCD"	"MS2"	"0"	"277.3"	"100.000"	"46.9750"	"14088"	"14088"	"14074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.0"	""	"369.7"	""	"393.1"	""	"372.2"	""	"496.5"	"508.4"	""	"685"	"50"	"35.000"	"28.000"	"0.0003263326861781"	""	"0"	"6.501E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"705.90295"	"1410.79863"	"1410.79930"	"-0.47"	"-0.00033"	"8/76"	"8"	"76"	"4310711.6696167"	"HCD"	"MS2"	"0"	"322.4"	"100.000"	"46.3778"	"13885"	"13885"	"13874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"611.8"	""	"454.8"	""	"419.2"	""	"453.8"	"0.5"	"553.7"	"555.6"	""	"718"	"55"	"35.000"	"28.000"	"0.000117245031749869"	""	"0"	"5.171E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"470.93814"	"1410.79987"	"1410.79930"	"0.40"	"0.00019"	"7/76"	"7"	"76"	"4264295.84625244"	"HCD"	"MS2"	"50.15272"	"195.8"	"100.000"	"46.4693"	"13921"	"13921"	"13902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"311.0"	""	"256.4"	""	"271.1"	""	"292.0"	"2.2"	"340.6"	"380.9"	""	"713"	"45"	"35.000"	"28.000"	"0.00112735198585003"	"20"	"9.9E-05"	"0.0007127"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSGQGVVK"	"[R].dYSGQGVVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"470.93835"	"1410.80051"	"1410.79930"	"0.86"	"0.00040"	"5/76"	"5"	"76"	"4097753.94451904"	"HCD"	"MS2"	"51.07893"	"214.7"	"100.000"	"46.7916"	"14015"	"14015"	"13991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"318.2"	""	"283.8"	""	"293.0"	""	"356.9"	""	"381.8"	"405.2"	""	"711"	"12"	"35.000"	"28.000"	"2.24305335962709"	"13"	"0.00455"	"0.05317"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELFVTSK"	"[R].eELFVTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"705.91553"	"1410.82378"	"1410.82445"	"-0.48"	"-0.00034"	"14/68"	"14"	"68"	"1056995.53320313"	"HCD"	"MS2"	"1.923038"	"92.0"	"100.000"	"83.8823"	"29063"	"29063"	"29049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.1"	""	"141.3"	""	"150.3"	""	"120.5"	""	"143.2"	"167.0"	""	"570"	"48"	"34.000"	"27.000"	"0.000477358719667535"	"26"	"0"	"0.0002964"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELFVTSK"	"[R].eELFVTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"705.91553"	"1410.82378"	"1410.82445"	"-0.48"	"-0.00034"	"7/68"	"7"	"68"	"1470784.92779541"	"HCD"	"MS2"	"42.14847"	"116.1"	"100.000"	"83.6090"	"28982"	"28982"	"28965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.7"	""	"188.4"	""	"174.4"	""	"151.3"	""	"188.6"	"190.6"	""	"570"	"42"	"34.000"	"27.000"	"0.00194019267227716"	"24"	"0"	"0.0002988"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELFVTSK"	"[R].eELFVTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"705.91589"	"1410.82451"	"1410.82445"	"0.04"	"0.00003"	"7/68"	"7"	"68"	"1142084.18591309"	"HCD"	"MS2"	"5.326375"	"95.2"	"100.000"	"83.9090"	"29103"	"29103"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"158.1"	""	"144.2"	""	"150.9"	""	"116.2"	""	"162.9"	"174.6"	""	"563"	"41"	"34.000"	"27.000"	"0.0021501977307712"	"22"	"0.0001686"	"0.001077"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELFVTSK"	"[R].eELFVTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"705.91608"	"1410.82488"	"1410.82445"	"0.30"	"0.00021"	"7/68"	"7"	"68"	"1408636.4319458"	"HCD"	"MS2"	"30.45272"	"114.0"	"100.000"	"83.5938"	"28947"	"28947"	"28931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.6"	""	"179.8"	""	"175.3"	""	"149.6"	""	"179.2"	"192.0"	""	"561"	"44"	"34.000"	"27.000"	"0.00111155988608651"	""	"0"	"0.0002992"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELFVTSK"	"[R].eELFVTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.91626"	"1410.82524"	"1410.82445"	"0.56"	"0.00040"	"8/68"	"8"	"68"	"191250.431640625"	"HCD"	"MS2"	"10.17519"	"15.5"	"100.000"	"84.1822"	"29185"	"29185"	"29162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"15.4"	""	"26.8"	"1.9"	"22.7"	"1.1"	"26.3"	"30.2"	""	"563"	"17"	"34.000"	"27.000"	"0.535153535798408"	"14"	"0.001261"	"0.01021"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSDSMTK"	"[K].tSPSDSMTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"706.37787"	"1411.74846"	"1411.75030"	"-1.30"	"-0.00092"	"11/78"	"11"	"78"	"251258.705200195"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"35.9593"	"9662"	"9662"	"9633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.2"	""	"32.3"	""	"29.0"	""	"24.2"	""	"42.9"	"53.6"	""	"727"	"32"	"35.000"	"28.000"	"0.0233616985244737"	"18"	"0.004213"	"0.04678"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPSDSMTK"	"[K].tSPSDSMTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"P69735"	"Rab3 GTPase-activating protein catalytic subunit (Fragments) OS=Rattus norvegicus OX=10116 GN=Rab3gap1 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"706.37836"	"1411.74944"	"1411.75030"	"-0.61"	"-0.00043"	"5/78"	"5"	"78"	"260140.6796875"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"36.0392"	"9657"	"9657"	"9632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"29.5"	""	"32.7"	""	"27.1"	"0.4"	"44.8"	"53.9"	""	"730"	"22"	"35.000"	"28.000"	"0.20620199580649"	"18"	"0.007379"	"0.09322"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THFEYEK"	"[R].tHFEYEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"471.25763"	"1411.75833"	"1411.76219"	"-2.73"	"-0.00128"	"6/58"	"6"	"58"	"5683699.0824585"	"HCD"	"MS2"	"19.92402"	"207.3"	"100.000"	"40.9385"	"11678"	"11678"	"11656"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.4"	""	"284.6"	""	"297.3"	""	"350.3"	""	"365.8"	"394.9"	""	"770"	"27"	"35.000"	"28.000"	"0.0800683224534922"	"18"	"0.0005778"	"0.007058"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THFEYEK"	"[R].tHFEYEk.[E]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"471.25821"	"1411.76007"	"1411.76219"	"-1.50"	"-0.00070"	"10/58"	"10"	"58"	"7072458.38598633"	"HCD"	"MS2"	"0"	"261.9"	"100.000"	"41.0888"	"11704"	"11704"	"11684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"372.5"	""	"387.1"	""	"338.9"	""	"406.9"	""	"487.3"	"493.4"	""	"770"	"26"	"35.000"	"28.000"	"0.0917192995703095"	"21"	"0.001316"	"0.01033"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEGELHDLR"	"[R].tLEGELHDLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"471.26273"	"1411.77362"	"1411.77426"	"-0.45"	"-0.00021"	"13/86"	"13"	"86"	"2840407.68322754"	"HCD"	"MS2"	"6.897813"	"57.1"	"100.000"	"62.3179"	"20320"	"20320"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"42.2"	""	"50.6"	""	"103.3"	"2.4"	"138.4"	"162.1"	""	"704"	"60"	"35.000"	"28.000"	"3.75441834673051E-05"	"28"	"0"	"1.335E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSSTTNTGK"	"[R].gTSSTTNTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"471.26422"	"1411.77811"	"1411.77929"	"-0.84"	"-0.00039"	"11/90"	"11"	"90"	"1800529.72558594"	"HCD"	"MS2"	"6.255835"	"98.9"	"100.000"	"21.5210"	"3924"	"3924"	"3899"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.9"	""	"131.5"	""	"130.1"	""	"163.3"	"0.1"	"186.8"	"184.8"	""	"700"	"40"	"35.000"	"28.000"	"0.00388211185341841"	"20"	"0.0001686"	"0.001399"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSSTTNTGK"	"[R].gTSSTTNTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"706.39294"	"1411.77861"	"1411.77929"	"-0.48"	"-0.00034"	"9/90"	"9"	"90"	"2986532.9050293"	"HCD"	"MS2"	"0"	"255.4"	"100.000"	"21.4797"	"3907"	"3907"	"3883"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"418.3"	""	"383.0"	""	"318.9"	""	"400.1"	""	"446.3"	"453.5"	""	"680"	"57"	"35.000"	"28.000"	"6.30200751961036E-05"	"20"	"0"	"3.39E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSSTTNTGK"	"[R].gTSSTTNTGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"706.39319"	"1411.77910"	"1411.77929"	"-0.14"	"-0.00010"	"9/90"	"9"	"90"	"2252398.49176025"	"HCD"	"MS2"	"0"	"199.1"	"100.000"	"21.5008"	"3879"	"3879"	"3849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"324.4"	""	"294.8"	""	"236.3"	""	"304.5"	"0.2"	"375.2"	"350.5"	""	"679"	"57"	"35.000"	"28.000"	"6.27826696143057E-05"	"23"	"0"	"6.038E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"706.39429"	"1411.78130"	"1411.78332"	"-1.43"	"-0.00101"	"8/74"	"8"	"74"	"488990.649108887"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"48.0369"	"14559"	"14559"	"14529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.4"	""	"58.4"	""	"67.3"	""	"65.7"	"0.7"	"99.8"	"82.7"	""	"671"	"60"	"35.000"	"28.000"	"3.34728371412467E-05"	""	"0"	"5.115E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"706.39478"	"1411.78227"	"1411.78332"	"-0.74"	"-0.00052"	"8/74"	"8"	"74"	"291744.345031738"	"HCD"	"MS2"	"100"	"28.5"	"100.000"	"48.4488"	"14689"	"14689"	"14663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"37.4"	""	"39.4"	""	"42.1"	"0.3"	"51.8"	"60.1"	""	"653"	"15"	"35.000"	"28.000"	"0.992848960883305"	"13"	"0.002286"	"0.0217"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"706.39490"	"1411.78252"	"1411.78332"	"-0.57"	"-0.00040"	"8/74"	"8"	"74"	"5298347.09173584"	"HCD"	"MS2"	"0"	"418.8"	"100.000"	"47.7129"	"14427"	"14427"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"607.0"	""	"497.4"	""	"612.8"	""	"586.1"	""	"908.3"	"765.7"	""	"696"	"61"	"35.000"	"28.000"	"2.89453792343729E-05"	""	"0"	"0.0001528"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.6222"	"0.0000"	"1"	"1"	"1"	"471.26572"	"1411.78260"	"1411.78332"	"-0.51"	"-0.00024"	"7/74"	"7"	"74"	"3461425.89672852"	"HCD"	"MS2"	"8.760502"	"140.9"	"100.000"	"47.6852"	"14415"	"14415"	"14394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.9"	""	"169.1"	""	"194.6"	""	"195.1"	"2.2"	"311.5"	"276.8"	""	"696"	"45"	"35.000"	"28.000"	"0.00116299873929088"	""	"0"	"0.0003074"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7627"	"0.0000"	"1"	"1"	"1"	"706.39496"	"1411.78264"	"1411.78332"	"-0.48"	"-0.00034"	"8/74"	"8"	"74"	"4503835.29730225"	"HCD"	"MS2"	"0"	"372.5"	"100.000"	"48.0490"	"14526"	"14526"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"562.1"	""	"458.5"	""	"535.8"	""	"513.7"	""	"786.5"	"678.1"	""	"696"	"59"	"35.000"	"28.000"	"4.67282206475976E-05"	""	"0"	"8.126E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"471.26578"	"1411.78278"	"1411.78332"	"-0.38"	"-0.00018"	"9/74"	"9"	"74"	"1910005.93920898"	"HCD"	"MS2"	"13.78261"	"89.3"	"100.000"	"48.0743"	"14536"	"14536"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.0"	""	"109.9"	""	"122.0"	""	"139.6"	"0.8"	"191.0"	"177.8"	""	"696"	"34"	"35.000"	"28.000"	"0.0126351163059995"	"25"	"0.0001991"	"0.005158"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5532"	"0.0000"	"1"	"1"	"1"	"471.26578"	"1411.78278"	"1411.78332"	"-0.38"	"-0.00018"	"7/74"	"7"	"74"	"6180603.2878418"	"HCD"	"MS2"	"31.14101"	"230.8"	"100.000"	"47.3838"	"14292"	"14292"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"362.5"	""	"282.6"	""	"313.4"	""	"360.0"	""	"457.2"	"411.9"	""	"696"	"47"	"35.000"	"28.000"	"0.000750895054385128"	""	"9.9E-05"	"0.0005994"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"706.39508"	"1411.78288"	"1411.78332"	"-0.31"	"-0.00022"	"8/74"	"8"	"74"	"14679750.5181885"	"HCD"	"MS2"	"0"	"1115.7"	"100.000"	"47.4115"	"14304"	"14304"	"14287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1663.7"	""	"1437.0"	""	"1558.6"	""	"1658.7"	""	"2274.5"	"1997.7"	""	"696"	"61"	"35.000"	"28.000"	"2.97563216083869E-05"	""	"0"	"0.0002465"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"471.26593"	"1411.78324"	"1411.78332"	"-0.06"	"-0.00003"	"7/74"	"7"	"74"	"6803232.72387695"	"HCD"	"MS2"	"32.66612"	"249.2"	"100.000"	"47.7312"	"14396"	"14396"	"14374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"376.8"	""	"326.3"	""	"353.0"	""	"373.5"	"0.2"	"483.4"	"448.2"	""	"689"	"45"	"35.000"	"28.000"	"0.00110710605556159"	""	"0"	"0.0003451"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAEDYGVTK"	"[K].aAEDYGVTk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"706.39526"	"1411.78325"	"1411.78332"	"-0.05"	"-0.00003"	"8/74"	"8"	"74"	"16710201.8949585"	"HCD"	"MS2"	"0"	"997.3"	"75.576"	"47.7566"	"14407"	"14407"	"14390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1507.5"	""	"1293.2"	""	"1395.3"	""	"1467.2"	"5.4"	"2024.6"	"1760.1"	""	"689"	"61"	"35.000"	"28.000"	"2.94570482588774E-05"	""	"0"	"0.000167"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLEVGRPEGR"	"[R].lGLEVGRPEGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"471.27792"	"1411.81922"	"1411.82188"	"-1.88"	"-0.00089"	"11/98"	"11"	"98"	"3218211.43878174"	"HCD"	"MS2"	"11.00836"	"119.8"	"100.000"	"48.0668"	"14571"	"14571"	"14545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.9"	""	"158.8"	""	"171.3"	""	"199.8"	""	"230.8"	"224.2"	""	"567"	"26"	"34.000"	"27.000"	"0.0788048711409759"	"24"	"0"	"0.0003056"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGLEVGRPEGR"	"[R].lGLEVGRPEGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"471.27823"	"1411.82013"	"1411.82188"	"-1.24"	"-0.00058"	"13/98"	"13"	"98"	"3183754.29351807"	"HCD"	"MS2"	"6.65924"	"120.4"	"100.000"	"48.3984"	"14668"	"14668"	"14647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.0"	""	"165.8"	""	"155.5"	""	"184.7"	"0.6"	"239.8"	"232.4"	""	"569"	"25"	"34.000"	"27.000"	"0.0948598144311404"	"22"	"0"	"3.575E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmmGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"706.86438"	"1412.72148"	"1412.72276"	"-0.90"	"-0.00064"	"8/88"	"8"	"88"	"964593.761108398"	"HCD"	"MS2"	"6.301716"	"49.0"	"100.000"	"51.2466"	"15828"	"15828"	"15805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.9"	""	"40.4"	""	"58.8"	""	"141.7"	"1.0"	"93.5"	"91.3"	""	"617"	"20"	"34.000"	"27.000"	"0.317143027972017"	"26"	"0.002559"	"0.02611"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANVMMGPYR"	"[R].lANVmmGPYR.[Q]"	"N-Term(TMT6plex); M5(Oxidation); M6(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"706.86438"	"1412.72148"	"1412.72276"	"-0.90"	"-0.00064"	"7/88"	"7"	"88"	"1105246.92285156"	"HCD"	"MS2"	"6.822852"	"52.8"	"100.000"	"50.9095"	"15724"	"15724"	"15702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	"1.9"	"45.7"	""	"50.9"	""	"148.6"	"0.9"	"109.2"	"101.1"	""	"617"	"16"	"34.000"	"27.000"	"0.724861725231703"	"25"	"0.008135"	"0.1043"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.58731"	"1412.74738"	"1412.74957"	"-1.55"	"-0.00073"	"8/64"	"8"	"64"	"2394062.13726807"	"HCD"	"MS2"	"41.91122"	"107.6"	"100.000"	"42.7869"	"12391"	"12391"	"12362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.3"	""	"107.1"	""	"129.9"	""	"252.4"	""	"219.8"	"205.4"	""	"742"	"13"	"35.000"	"28.000"	"1.8896175316222"	"13"	"0.004213"	"0.04595"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"706.87750"	"1412.74773"	"1412.74957"	"-1.31"	"-0.00092"	"7/64"	"7"	"64"	"868535.256530762"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"42.9227"	"12446"	"12446"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"63.9"	""	"77.9"	""	"164.5"	""	"104.9"	"110.3"	""	"739"	"28"	"35.000"	"28.000"	"0.0643597639718201"	"23"	"0.003904"	"0.04226"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"706.87787"	"1412.74846"	"1412.74957"	"-0.79"	"-0.00056"	"7/64"	"7"	"64"	"1189584.48083496"	"HCD"	"MS2"	"21.75606"	"78.5"	"100.000"	"42.4394"	"12283"	"12283"	"12258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.8"	""	"84.5"	""	"95.4"	""	"183.1"	""	"131.2"	"133.9"	""	"724"	"24"	"35.000"	"28.000"	"0.154777764786874"	"23"	"0.005755"	"0.07123"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"706.87811"	"1412.74895"	"1412.74957"	"-0.44"	"-0.00031"	"7/64"	"7"	"64"	"1316442.02325439"	"HCD"	"MS2"	"7.175529"	"88.1"	"100.000"	"42.6190"	"12322"	"12322"	"12298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.9"	""	"94.9"	""	"111.8"	""	"216.6"	""	"153.0"	"150.2"	""	"751"	"22"	"35.000"	"28.000"	"0.235835913734401"	"25"	"0.007412"	"0.09451"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEMPVDK"	"[K].yGEmPVDk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"706.87860"	"1412.74993"	"1412.74957"	"0.25"	"0.00018"	"7/64"	"7"	"64"	"962271.31262207"	"HCD"	"MS2"	"0"	"70.4"	"100.000"	"42.7409"	"12406"	"12406"	"12383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.5"	""	"62.7"	""	"87.6"	""	"172.8"	""	"120.3"	"136.0"	""	"750"	"24"	"35.000"	"28.000"	"0.154536569661499"	"25"	"0.006577"	"0.08181"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"706.88617"	"1412.76506"	"1412.76733"	"-1.61"	"-0.00113"	"7/66"	"7"	"66"	"445386.148803711"	"HCD"	"MS2"	"0"	"48.3"	"100.000"	"45.9906"	"13731"	"13731"	"13701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.8"	""	"52.8"	""	"57.7"	""	"82.7"	""	"104.3"	"98.6"	""	"717"	"42"	"35.000"	"28.000"	"0.00239601294448348"	"20"	"0"	"0.0003947"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSSEELDK"	"[K].fSSEELDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q99068"	"Alpha-2-macroglobulin receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Lrpap1 PE=1 SV=2"	"Q99068"	"Alpha-2-macroglobulin receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Lrpap1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"706.88678"	"1412.76628"	"1412.76733"	"-0.74"	"-0.00052"	"7/66"	"7"	"66"	"368629.666503906"	"HCD"	"MS2"	"13.76615"	"39.8"	"100.000"	"68.9517"	"23012"	"23012"	"22986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.5"	""	"49.9"	""	"56.8"	""	"68.1"	"1.5"	"76.5"	"71.5"	""	"693"	"21"	"35.000"	"28.000"	"0.28164577385086"	"20"	"0.0001991"	"0.00506"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"706.88684"	"1412.76641"	"1412.76733"	"-0.66"	"-0.00046"	"7/66"	"7"	"66"	"384614.865600586"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"46.3436"	"13839"	"13839"	"13825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.3"	""	"44.0"	""	"49.1"	""	"59.0"	"0.5"	"80.2"	"80.1"	""	"714"	"41"	"35.000"	"28.000"	"0.00293540626031104"	"19"	"0"	"0.0003486"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"706.88684"	"1412.76641"	"1412.76733"	"-0.66"	"-0.00046"	"7/66"	"7"	"66"	"1763298.19555664"	"HCD"	"MS2"	"0"	"162.3"	"100.000"	"46.0518"	"13721"	"13721"	"13700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.6"	""	"173.9"	""	"191.6"	""	"279.8"	""	"313.7"	"315.8"	""	"714"	"46"	"35.000"	"28.000"	"0.000846580412921211"	"23"	"9.9E-05"	"0.0004528"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTYEEAK"	"[R].dVTYEEAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"706.88715"	"1412.76702"	"1412.76733"	"-0.22"	"-0.00016"	"7/66"	"7"	"66"	"1387331.36120605"	"HCD"	"MS2"	"0"	"126.4"	"100.000"	"45.6733"	"13601"	"13601"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.7"	""	"135.3"	""	"149.8"	""	"223.2"	""	"231.0"	"248.5"	""	"715"	"46"	"35.000"	"28.000"	"0.000820873141700169"	"22"	"9.9E-05"	"0.0005601"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEETIGK"	"[K].dYEETIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"706.88727"	"1412.76726"	"1412.76733"	"-0.05"	"-0.00004"	"5/64"	"5"	"64"	"1392728.76538086"	"HCD"	"MS2"	"33.00794"	"134.8"	"100.000"	"58.3764"	"18756"	"18756"	"18731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.5"	""	"144.9"	""	"165.6"	""	"233.2"	""	"272.9"	"267.5"	""	"710"	"30"	"35.000"	"28.000"	"0.0334370806765609"	"22"	"0.0001991"	"0.002631"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISPGPNSQER"	"[R].vISPGPNSQER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"706.88818"	"1412.76909"	"1412.76951"	"-0.30"	"-0.00021"	"4/102"	"4"	"102"	"182641.872680664"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"34.3092"	"8958"	"8958"	"8929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"11.9"	""	"11.0"	""	"17.4"	""	"20.3"	"16.4"	""	"726"	"17"	"35.000"	"28.000"	"0.717639979360606"	"20"	"0.002189"	"0.02042"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEETIGK"	"[K].dYEETIGk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"706.88855"	"1412.76982"	"1412.76733"	"1.76"	"0.00125"	"7/64"	"7"	"64"	"903822.303833008"	"HCD"	"MS2"	"0"	"94.5"	"100.000"	"58.5515"	"18792"	"18792"	"18766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.8"	"2.6"	"114.9"	""	"104.8"	""	"143.5"	""	"190.0"	"188.8"	""	"718"	"17"	"35.000"	"28.000"	"0.688802077900633"	"19"	"0.0003938"	"0.006317"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISPGPNSQER"	"[R].vISPGPNSQER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"Q4KM62"	"Palmdelphin OS=Rattus norvegicus OX=10116 GN=Palmd PE=1 SV=1"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"706.88910"	"1412.77092"	"1412.76951"	"1.00"	"0.00071"	"4/102"	"4"	"102"	"184335.314025879"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"34.2103"	"8954"	"8954"	"8925"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"8.1"	""	"13.8"	""	"19.4"	""	"23.6"	"19.8"	""	"706"	"21"	"35.000"	"28.000"	"0.309581289863703"	"22"	"0.002189"	"0.02117"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGQEYAAK"	"[K].sTGQEYAAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91XS8"	"Serine/threonine-protein kinase 17B OS=Rattus norvegicus OX=10116 GN=Stk17b PE=1 SV=1"	"Q91XS8"	"Serine/threonine-protein kinase 17B OS=Rattus norvegicus OX=10116 GN=Stk17b PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"706.89117"	"1412.77507"	"1412.77857"	"-2.47"	"-0.00175"	"7/82"	"7"	"82"	"217236.163818359"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"32.9197"	"8430"	"8430"	"8404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"26.5"	""	"26.6"	""	"29.1"	""	"26.8"	"26.3"	""	"697"	"37"	"35.000"	"28.000"	"0.00661002013542085"	""	"0"	"0.0002308"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGQEYAAK"	"[K].sTGQEYAAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q91XS8"	"Serine/threonine-protein kinase 17B OS=Rattus norvegicus OX=10116 GN=Stk17b PE=1 SV=1"	"Q91XS8"	"Serine/threonine-protein kinase 17B OS=Rattus norvegicus OX=10116 GN=Stk17b PE=1 SV=1"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"706.89148"	"1412.77568"	"1412.77857"	"-2.04"	"-0.00144"	"6/82"	"6"	"82"	"175205.096618652"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"33.0166"	"8432"	"8432"	"8403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"22.4"	""	"24.9"	""	"25.7"	""	"26.5"	"31.7"	""	"697"	"31"	"35.000"	"28.000"	"0.0302832709606276"	"25"	"0.00212"	"0.01932"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDSSEILK"	"[R].yDSSEILk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q924C3"	"Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Rattus norvegicus OX=10116 GN=Enpp1 PE=1 SV=2"	"Q924C3"	"Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 OS=Rattus norvegicus OX=10116 GN=Enpp1 PE=1 SV=2"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"706.90582"	"1412.80437"	"1412.80372"	"0.46"	"0.00033"	"7/62"	"7"	"62"	"785505.096496582"	"HCD"	"MS2"	"36.87343"	"79.9"	"100.000"	"73.4682"	"24875"	"24875"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.4"	""	"95.5"	""	"102.9"	""	"125.4"	""	"146.1"	"161.2"	""	"605"	"26"	"34.000"	"27.000"	"0.0777544724287581"	""	"9.9E-05"	"0.001011"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELNEPPK"	"[K].qELNEPPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"706.91022"	"1412.81316"	"1412.81495"	"-1.27"	"-0.00090"	"6/76"	"6"	"76"	"377343.154907227"	"HCD"	"MS2"	"31.75047"	"33.2"	"100.000"	"41.7471"	"11967"	"11967"	"11938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.7"	""	"33.2"	""	"31.8"	""	"79.4"	"0.2"	"71.7"	"62.7"	""	"560"	"14"	"34.000"	"27.000"	"0.998063173593482"	"22"	"0.003818"	"0.04204"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELNEPPK"	"[K].qELNEPPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"706.91058"	"1412.81389"	"1412.81495"	"-0.75"	"-0.00053"	"9/76"	"9"	"76"	"357713.174255371"	"HCD"	"MS2"	"35.00871"	"30.5"	"100.000"	"41.5562"	"11924"	"11924"	"11894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"27.3"	""	"25.1"	""	"67.6"	""	"68.1"	"66.3"	""	"547"	"21"	"34.000"	"27.000"	"0.199966539332715"	"23"	"0.0001991"	"0.005534"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEDELLAK"	"[R].hEDELLAk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"471.60974"	"1412.81467"	"1412.81495"	"-0.20"	"-0.00009"	"7/60"	"7"	"60"	"11227035.1552124"	"HCD"	"MS2"	"42.01989"	"446.0"	"100.000"	"44.9617"	"13276"	"13276"	"13266"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"473.6"	""	"489.2"	""	"530.9"	""	"961.3"	""	"950.7"	"833.4"	""	"566"	"8"	"34.000"	"27.000"	"4.17624948917078"	"13"	"0.001348"	"0.01125"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPEGVLYTR"	"[K].ySPEGVLYTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"707.38202"	"1413.75676"	"1413.75755"	"-0.56"	"-0.00039"	"7/86"	"7"	"86"	"1042638.79980469"	"HCD"	"MS2"	"0"	"55.7"	"100.000"	"72.7641"	"24558"	"24558"	"24538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.8"	""	"74.4"	""	"85.6"	""	"81.0"	""	"103.4"	"104.8"	""	"654"	"42"	"35.000"	"28.000"	"0.0019344065437538"	"18"	"0.0001991"	"0.002924"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPEGVLYTR"	"[K].ySPEGVLYTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"707.38245"	"1413.75762"	"1413.75755"	"0.05"	"0.00003"	"7/86"	"7"	"86"	"1360224.2388916"	"HCD"	"MS2"	"10.76308"	"69.6"	"100.000"	"72.7997"	"24602"	"24602"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.0"	""	"95.5"	""	"97.8"	""	"105.0"	"0.4"	"134.1"	"120.5"	""	"650"	"40"	"35.000"	"28.000"	"0.00302610059527045"	"18"	"9.9E-05"	"0.0004999"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPEGVLYTR"	"[K].ySPEGVLYTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"707.38263"	"1413.75798"	"1413.75755"	"0.31"	"0.00022"	"7/86"	"7"	"86"	"1203111.06030273"	"HCD"	"MS2"	"41.71251"	"57.9"	"100.000"	"72.5138"	"24486"	"24486"	"24462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.2"	""	"68.3"	""	"84.9"	""	"98.6"	""	"103.7"	"102.9"	""	"651"	"38"	"35.000"	"28.000"	"0.00561760233842811"	"17"	"0.0001991"	"0.003963"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPEGVLYTR"	"[K].ySPEGVLYTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"707.38281"	"1413.75835"	"1413.75755"	"0.57"	"0.00040"	"7/86"	"7"	"86"	"1380877.33929443"	"HCD"	"MS2"	"26.52538"	"72.1"	"100.000"	"72.4688"	"24438"	"24438"	"24416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.4"	""	"98.1"	""	"109.3"	""	"114.9"	""	"136.2"	"125.8"	""	"651"	"38"	"35.000"	"28.000"	"0.0053524299590646"	"18"	"9.9E-05"	"0.0007477"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGYQSSQK"	"[K].aSGYQSSQk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.39093"	"1413.77458"	"1413.77381"	"0.54"	"0.00038"	"12/82"	"12"	"82"	"267538.641723633"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"26.2705"	"5782"	"5782"	"5758"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"26.4"	""	"24.8"	""	"40.4"	""	"45.9"	"37.5"	""	"687"	"27"	"35.000"	"28.000"	"0.0732700927665849"	"14"	"0.0001686"	"0.001818"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQSGLQPTGLLN"	"[K].gQSGLQPTGLLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.39606"	"1413.78484"	"1413.78991"	"-3.59"	"-0.00254"	"10/118"	"10"	"118"	"828934.155151367"	"HCD"	"MS2"	"5.218528"	"15.1"	"100.000"	"93.5937"	"32968"	"32968"	"32951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"21.1"	""	"21.8"	""	"25.2"	""	"29.3"	"29.2"	""	"695"	"35"	"35.000"	"28.000"	"0.0106403229320751"	"15"	"0"	"8.081E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQSGLQPTGLLN"	"[K].gQSGLQPTGLLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"707.39624"	"1413.78520"	"1413.78991"	"-3.33"	"-0.00235"	"8/118"	"8"	"118"	"715142.798950195"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"93.4756"	"32956"	"32956"	"32940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"19.6"	""	"15.2"	""	"22.4"	""	"24.8"	"23.1"	""	"698"	"19"	"35.000"	"28.000"	"0.443430362717781"	"16"	"0.0001991"	"0.004208"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQSGLQPTGLLN"	"[K].gQSGLQPTGLLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"707.39655"	"1413.78581"	"1413.78991"	"-2.90"	"-0.00205"	"6/118"	"6"	"118"	"534906.042114258"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"93.8891"	"33088"	"33088"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"19.4"	""	"21.9"	""	"20.9"	""	"23.1"	"25.1"	""	"682"	"20"	"35.000"	"28.000"	"0.363709277339518"	"14"	"0.0001991"	"0.004367"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQSGLQPTGLLN"	"[K].gQSGLQPTGLLN.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"P18211"	"Rano class II histocompatibility antigen, D-1 beta chain OS=Rattus norvegicus OX=10116 GN=RT1-Db1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"707.39655"	"1413.78581"	"1413.78991"	"-2.90"	"-0.00205"	"8/118"	"8"	"118"	"718726.280395508"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"93.7874"	"33082"	"33082"	"33062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"25.6"	""	"20.5"	""	"24.5"	""	"23.8"	"25.5"	""	"682"	"36"	"35.000"	"28.000"	"0.00884615162482515"	"15"	"0.0001991"	"0.002163"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSETSAFVK"	"[K].sSETSAFVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"707.40265"	"1413.79802"	"1413.79897"	"-0.67"	"-0.00047"	"10/72"	"10"	"72"	"1042856.18377686"	"HCD"	"MS2"	"43.11255"	"69.2"	"100.000"	"50.8818"	"15713"	"15713"	"15686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"81.9"	""	"92.4"	""	"145.2"	""	"131.6"	"123.3"	""	"696"	"10"	"35.000"	"28.000"	"3.60229474004411"	"16"	"0.0001991"	"0.002414"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSETSAFVK"	"[K].sSETSAFVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"707.40308"	"1413.79888"	"1413.79897"	"-0.06"	"-0.00005"	"13/72"	"13"	"72"	"1576410.03302002"	"HCD"	"MS2"	"22.14203"	"117.9"	"100.000"	"51.1247"	"15778"	"15778"	"15763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.9"	"3.0"	"171.1"	""	"170.7"	""	"222.2"	""	"197.3"	"203.0"	""	"704"	"27"	"35.000"	"28.000"	"0.0773646675220258"	"21"	"9.9E-05"	"0.0007657"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSETSAFVK"	"[K].sSETSAFVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"707.40332"	"1413.79936"	"1413.79897"	"0.28"	"0.00020"	"8/72"	"8"	"72"	"2154722.29284668"	"HCD"	"MS2"	"8.615814"	"177.2"	"100.000"	"50.5484"	"15578"	"15578"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.6"	""	"251.3"	""	"259.1"	""	"287.4"	""	"308.5"	"300.2"	""	"703"	"38"	"35.000"	"28.000"	"0.00572697555472862"	"27"	"9.9E-05"	"0.0005012"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSETSAFVK"	"[K].sSETSAFVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"Q920A6"	"Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus OX=10116 GN=Scpep1 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"707.40356"	"1413.79985"	"1413.79897"	"0.63"	"0.00044"	"7/72"	"7"	"72"	"1516300.51257324"	"HCD"	"MS2"	"5.963649"	"131.7"	"100.000"	"50.8255"	"15656"	"15656"	"15637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.5"	""	"193.3"	""	"189.3"	""	"226.0"	""	"228.2"	"206.6"	""	"703"	"39"	"35.000"	"28.000"	"0.00452819717420137"	"24"	"0"	"0.0001536"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"471.94589"	"1413.82312"	"1413.82629"	"-2.24"	"-0.00106"	"8/106"	"8"	"106"	"3034621.67987061"	"HCD"	"MS2"	"43.70024"	"54.7"	"100.000"	"71.7456"	"24148"	"24148"	"24132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"56.1"	""	"57.0"	""	"109.8"	"0.1"	"121.9"	"113.5"	""	"618"	"27"	"34.000"	"27.000"	"0.0575384925228826"	"21"	"0"	"0.0002206"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"471.94632"	"1413.82441"	"1413.82629"	"-1.34"	"-0.00063"	"8/106"	"8"	"106"	"3006854.01727295"	"HCD"	"MS2"	"46.15893"	"58.2"	"100.000"	"71.8515"	"24222"	"24222"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"59.9"	""	"69.9"	""	"114.5"	""	"122.2"	"134.6"	""	"619"	"25"	"34.000"	"27.000"	"0.0894665423592114"	"20"	"9.9E-05"	"0.0004452"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"471.94638"	"1413.82459"	"1413.82629"	"-1.21"	"-0.00057"	"8/106"	"8"	"106"	"3499572.10552979"	"HCD"	"MS2"	"51.84472"	"67.5"	"100.000"	"71.5497"	"24099"	"24099"	"24080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.8"	""	"78.0"	""	"81.0"	""	"122.3"	""	"141.4"	"142.6"	""	"632"	"23"	"34.000"	"28.000"	"0.176883402072455"	"25"	"9.9E-05"	"0.0004778"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"707.41602"	"1413.82475"	"1413.82629"	"-1.09"	"-0.00077"	"10/106"	"10"	"106"	"1054577.02935791"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"72.0643"	"24274"	"24274"	"24259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.2"	""	"62.2"	""	"61.1"	""	"89.5"	""	"110.1"	"112.1"	""	"629"	"44"	"34.000"	"27.000"	"0.00116043454750312"	"26"	"0"	"0.0001863"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"471.94656"	"1413.82514"	"1413.82629"	"-0.82"	"-0.00039"	"4/106"	"4"	"106"	"3611184.62872314"	"HCD"	"MS2"	"49.17102"	"69.9"	"100.000"	"71.4351"	"24022"	"24022"	"24005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.6"	""	"78.7"	""	"79.8"	""	"134.3"	""	"145.5"	"146.4"	""	"625"	"22"	"34.000"	"27.000"	"0.200839911661569"	"25"	"0"	"0.0003822"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"707.41656"	"1413.82585"	"1413.82629"	"-0.31"	"-0.00022"	"9/106"	"9"	"106"	"1095503.50537109"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"72.1627"	"24344"	"24344"	"24328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"56.4"	""	"54.7"	""	"91.3"	"0.2"	"95.6"	"114.0"	""	"632"	"43"	"34.000"	"28.000"	"0.0015405900287267"	""	"9.9E-05"	"0.0007799"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"707.41663"	"1413.82598"	"1413.82629"	"-0.23"	"-0.00016"	"10/106"	"10"	"106"	"7642947.41699219"	"HCD"	"MS2"	"0"	"262.5"	"100.000"	"71.8813"	"24235"	"24235"	"24218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"364.1"	""	"261.6"	""	"307.7"	""	"480.7"	"2.3"	"513.2"	"561.8"	""	"632"	"49"	"34.000"	"28.000"	"0.000443289130641578"	""	"0"	"2.294E-06"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"707.41669"	"1413.82610"	"1413.82629"	"-0.14"	"-0.00010"	"10/106"	"10"	"106"	"2076163.59558105"	"HCD"	"MS2"	"0"	"88.1"	"100.000"	"71.1931"	"23923"	"23923"	"23902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.0"	""	"96.0"	""	"90.1"	""	"166.5"	""	"169.0"	"189.4"	""	"632"	"52"	"34.000"	"28.000"	"0.000184793666589656"	""	"0"	"1.737E-06"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"707.41675"	"1413.82622"	"1413.82629"	"-0.05"	"-0.00004"	"10/106"	"10"	"106"	"1598723.29907227"	"HCD"	"MS2"	"0"	"76.0"	"100.000"	"71.2689"	"23985"	"23985"	"23964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.0"	""	"80.9"	""	"84.0"	""	"142.9"	"0.6"	"148.7"	"158.3"	""	"632"	"50"	"34.000"	"28.000"	"0.000312382777911593"	""	"0"	"0.0001003"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"707.41675"	"1413.82622"	"1413.82629"	"-0.05"	"-0.00004"	"10/106"	"10"	"106"	"7475676.09912109"	"HCD"	"MS2"	"0"	"274.9"	"100.000"	"71.7779"	"24162"	"24162"	"24145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"379.1"	""	"287.1"	""	"292.4"	""	"506.6"	"0.8"	"551.2"	"593.2"	""	"632"	"50"	"34.000"	"28.000"	"0.00032113458694714"	""	"0"	"9.077E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"707.41675"	"1413.82622"	"1413.82629"	"-0.05"	"-0.00004"	"10/106"	"10"	"106"	"10518093.4158325"	"HCD"	"MS2"	"0"	"377.3"	"100.000"	"71.5706"	"24108"	"24108"	"24094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"519.1"	"3.0"	"404.6"	""	"442.9"	""	"696.8"	""	"748.2"	"766.4"	""	"632"	"53"	"34.000"	"28.000"	"0.000161691460030737"	""	"0"	"7.98E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSGGIIVNGPR"	"[K].tLSGGIIVnGPR.[L]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8036"	"0.0000"	"1"	"1"	"1"	"707.41693"	"1413.82659"	"1413.82629"	"0.21"	"0.00015"	"7/98"	"7"	"98"	"672856.876159668"	"HCD"	"MS2"	"14.63294"	"38.4"	"100.000"	"76.9182"	"26246"	"26246"	"26231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.5"	""	"55.8"	""	"45.6"	""	"52.4"	""	"69.1"	"74.7"	""	"632"	"56"	"34.000"	"28.000"	"8.6037361335262E-05"	"27"	"0"	"1.234E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLSGGIIVNGPR"	"[K].tLSGGIIVnGPR.[L]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"707.41718"	"1413.82707"	"1413.82629"	"0.55"	"0.00039"	"9/98"	"9"	"98"	"603421.984191895"	"HCD"	"MS2"	"36.41232"	"36.0"	"100.000"	"77.0562"	"26332"	"26332"	"26323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.4"	""	"50.1"	""	"48.4"	""	"52.9"	"0.9"	"62.3"	"68.4"	""	"628"	"61"	"34.000"	"27.000"	"2.51726911903731E-05"	"26"	"0"	"4.252E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELTPQVISAAR"	"[R].eLTPQVISAAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"707.41730"	"1413.82732"	"1413.82629"	"0.72"	"0.00051"	"10/106"	"10"	"106"	"10256545.0029297"	"HCD"	"MS2"	"0"	"382.3"	"100.000"	"71.4743"	"24038"	"24038"	"24021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"536.5"	""	"398.5"	""	"418.2"	""	"710.1"	"1.9"	"761.7"	"802.2"	""	"622"	"45"	"34.000"	"27.000"	"0.000899001443415662"	""	"0"	"6.846E-06"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPSAPLDK"	"[K].iDPSAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"707.42004"	"1413.83281"	"1413.83535"	"-1.80"	"-0.00127"	"8/76"	"8"	"76"	"2286011.65563965"	"HCD"	"MS2"	"0"	"136.4"	"100.000"	"79.2481"	"27215"	"27215"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"221.3"	""	"181.5"	""	"182.5"	""	"230.4"	"2.1"	"227.8"	"245.0"	""	"571"	"40"	"34.000"	"27.000"	"0.003017213988805"	"18"	"0"	"0.0001578"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPSAPLDK"	"[K].iDPSAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"707.42029"	"1413.83330"	"1413.83535"	"-1.45"	"-0.00103"	"8/76"	"8"	"76"	"1985597.63134766"	"HCD"	"MS2"	"3.88548"	"121.3"	"100.000"	"79.1055"	"27130"	"27130"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.2"	""	"165.0"	""	"158.4"	""	"209.3"	"0.5"	"202.0"	"214.3"	""	"571"	"40"	"34.000"	"27.000"	"0.00313766167157985"	"18"	"0"	"9.057E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPSAPLDK"	"[K].iDPSAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"707.42053"	"1413.83379"	"1413.83535"	"-1.11"	"-0.00078"	"6/76"	"6"	"76"	"942380.752990723"	"HCD"	"MS2"	"0"	"58.7"	"100.000"	"79.7377"	"27387"	"27387"	"27367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.2"	""	"62.9"	""	"85.1"	""	"95.2"	""	"117.3"	"123.0"	""	"549"	"27"	"34.000"	"27.000"	"0.0535232342633583"	"21"	"0.0005161"	"0.006687"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPSAPLDK"	"[K].iDPSAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"707.42102"	"1413.83476"	"1413.83535"	"-0.42"	"-0.00029"	"7/76"	"7"	"76"	"2787278.27362061"	"HCD"	"MS2"	"0"	"172.6"	"100.000"	"79.3890"	"27245"	"27245"	"27233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"263.0"	""	"221.8"	""	"242.1"	""	"268.7"	""	"321.6"	"318.7"	""	"580"	"39"	"34.000"	"27.000"	"0.00326887262290898"	"20"	"0"	"9.844E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPSAPLDK"	"[K].iDPSAPLDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"P12711"	"Alcohol dehydrogenase class-3 OS=Rattus norvegicus OX=10116 GN=Adh5 PE=1 SV=2"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"707.42169"	"1413.83611"	"1413.83535"	"0.53"	"0.00038"	"8/76"	"8"	"76"	"2858595.89129639"	"HCD"	"MS2"	"0"	"175.5"	"100.000"	"79.5410"	"27335"	"27335"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.9"	""	"218.5"	""	"238.7"	""	"292.5"	"0.3"	"318.6"	"333.0"	""	"575"	"50"	"34.000"	"27.000"	"0.00030035706302598"	"24"	"0"	"0.0001065"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPEERPK"	"[K].vTPEERPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"471.95334"	"1413.84546"	"1413.84659"	"-0.79"	"-0.00037"	"9/66"	"9"	"66"	"11454222.1164551"	"HCD"	"MS2"	"12.93793"	"595.5"	"100.000"	"28.2997"	"6577"	"6577"	"6559"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"918.2"	""	"805.7"	""	"842.8"	""	"956.6"	""	"1051.4"	"1065.2"	""	"507"	"12"	"34.000"	"27.000"	"1.47903333933394"	"17"	"0.001615"	"0.01431"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPEERPK"	"[K].vTPEERPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"471.95352"	"1413.84601"	"1413.84659"	"-0.41"	"-0.00019"	"9/66"	"9"	"66"	"10137706.7574463"	"HCD"	"MS2"	"31.68069"	"515.6"	"100.000"	"28.5439"	"6632"	"6632"	"6608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"792.3"	""	"691.3"	""	"717.8"	""	"841.4"	""	"911.5"	"931.1"	""	"535"	"13"	"34.000"	"27.000"	"1.44651781387943"	"16"	"0.002799"	"0.02975"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPEERPK"	"[K].vTPEERPk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"707.42682"	"1413.84636"	"1413.84659"	"-0.16"	"-0.00011"	"6/66"	"6"	"66"	"194606.05847168"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"28.6998"	"6695"	"6695"	"6672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.8"	""	"15.1"	""	"10.0"	""	"13.0"	""	"23.5"	"19.1"	""	"534"	"19"	"34.000"	"27.000"	"0.356050222387608"	"18"	"0.004959"	"0.06245"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGPGSFQPAPR"	"[R].gGGGPGSFqPAPR.[G]"	"N-Term(TMT6plex); Q9(Deamidated)"	"1"	"1"	"Q68A21"	"Transcriptional activator protein Pur-beta OS=Rattus norvegicus OX=10116 GN=Purb PE=1 SV=3"	"Q68A21"	"Transcriptional activator protein Pur-beta OS=Rattus norvegicus OX=10116 GN=Purb PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"707.86719"	"1414.72710"	"1414.72764"	"-0.39"	"-0.00027"	"7/104"	"7"	"104"	"669082.762207031"	"HCD"	"MS2"	"0"	"49.3"	"100.000"	"36.9731"	"10033"	"10033"	"10004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.7"	""	"59.5"	""	"49.0"	""	"84.5"	""	"120.4"	"90.3"	""	"626"	"5"	"34.000"	"27.000"	"9.6949224065479"	"13"	"0.007792"	"0.09961"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYYTTPASR"	"[R].nIYYTTPASR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"707.87946"	"1414.75163"	"1414.75280"	"-0.82"	"-0.00058"	"9/98"	"9"	"98"	"293933.86730957"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"48.9750"	"14937"	"14937"	"14915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"29.6"	""	"32.1"	""	"34.8"	""	"54.5"	"55.8"	""	"756"	"11"	"35.000"	"28.000"	"3.12962137883262"	"16"	"0.006305"	"0.07855"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYYTTPASR"	"[R].nIYYTTPASR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"707.88007"	"1414.75286"	"1414.75280"	"0.04"	"0.00003"	"6/98"	"6"	"98"	"311286.934448242"	"HCD"	"MS2"	"19.6138"	"24.5"	"100.000"	"49.3628"	"15060"	"15060"	"15036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"30.4"	""	"30.1"	""	"40.7"	""	"48.9"	"52.7"	""	"758"	"30"	"35.000"	"28.000"	"0.0370372906742252"	"20"	"0.0001686"	"0.001664"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"707.89563"	"1414.78398"	"1414.78516"	"-0.83"	"-0.00059"	"11/106"	"11"	"106"	"2316938.63812256"	"HCD"	"MS2"	"0.79169"	"126.2"	"100.000"	"70.7829"	"23756"	"23756"	"23739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.4"	""	"169.9"	""	"183.5"	""	"204.7"	""	"223.2"	"212.8"	""	"795"	"43"	"35.000"	"29.000"	"0.00211513033058551"	"18"	"0"	"2.322E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"707.89581"	"1414.78435"	"1414.78516"	"-0.57"	"-0.00040"	"11/106"	"11"	"106"	"2290152.87298584"	"HCD"	"MS2"	"1.15921"	"114.7"	"100.000"	"70.9092"	"23840"	"23840"	"23829"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.3"	"2.8"	"139.3"	""	"163.7"	""	"183.9"	""	"203.3"	"201.0"	""	"804"	"43"	"36.000"	"29.000"	"0.00204751010164993"	"20"	"0"	"4.77E-07"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAGDNLGALVR"	"[R].aEAGDNLGALVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"707.89587"	"1414.78447"	"1414.78516"	"-0.49"	"-0.00034"	"10/106"	"10"	"106"	"778415.945617676"	"HCD"	"MS2"	"22.94886"	"45.7"	"100.000"	"71.0780"	"23876"	"23876"	"23854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"55.9"	""	"58.8"	""	"86.7"	"0.2"	"81.5"	"84.2"	""	"775"	"30"	"35.000"	"28.000"	"0.0396526034508792"	"23"	"0"	"8.403E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"472.26990"	"1414.79514"	"1414.79824"	"-2.19"	"-0.00103"	"8/62"	"8"	"62"	"4494143.31341553"	"HCD"	"MS2"	"10.47749"	"128.5"	"100.000"	"85.8473"	"29856"	"29856"	"29844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.0"	""	"152.1"	""	"142.3"	""	"217.6"	""	"323.5"	"271.7"	""	"789"	"16"	"35.000"	"28.000"	"1.08654322346691"	"21"	"0.005426"	"0.06883"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"472.27045"	"1414.79679"	"1414.79824"	"-1.03"	"-0.00048"	"7/62"	"7"	"62"	"4016259.08654785"	"HCD"	"MS2"	"10.31906"	"132.1"	"100.000"	"86.1239"	"29967"	"29967"	"29957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.8"	""	"151.1"	""	"139.3"	""	"223.5"	""	"330.2"	"307.7"	""	"778"	"14"	"35.000"	"28.000"	"1.58106455045268"	"21"	"0.004114"	"0.04491"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"472.27063"	"1414.79734"	"1414.79824"	"-0.64"	"-0.00030"	"8/62"	"8"	"62"	"4177775.41687012"	"HCD"	"MS2"	"7.258589"	"141.7"	"100.000"	"86.1210"	"29997"	"29997"	"29983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.5"	""	"150.9"	""	"166.7"	""	"236.9"	""	"341.3"	"351.6"	""	"773"	"17"	"35.000"	"28.000"	"0.794601715347871"	"20"	"0.004751"	"0.05632"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"707.90240"	"1414.79753"	"1414.79824"	"-0.50"	"-0.00035"	"12/62"	"12"	"62"	"3268807.15386963"	"HCD"	"MS2"	"0"	"289.9"	"100.000"	"85.6721"	"29787"	"29787"	"29778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"259.6"	""	"362.9"	""	"304.2"	""	"518.2"	"0.9"	"673.9"	"639.5"	""	"773"	"32"	"35.000"	"28.000"	"0.0250120620986827"	"25"	"0.002189"	"0.02113"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"707.90247"	"1414.79766"	"1414.79824"	"-0.41"	"-0.00029"	"6/62"	"6"	"62"	"483475.710449219"	"HCD"	"MS2"	"3.826465"	"47.9"	"100.000"	"86.5453"	"30166"	"30166"	"30153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"57.8"	""	"53.3"	""	"82.3"	""	"112.0"	"111.4"	""	"773"	"33"	"35.000"	"28.000"	"0.0188429761424959"	"25"	"0.0001991"	"0.003544"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"707.90283"	"1414.79839"	"1414.79824"	"0.11"	"0.00007"	"12/62"	"12"	"62"	"3785350.28137207"	"HCD"	"MS2"	"0"	"328.0"	"100.000"	"86.2733"	"30059"	"30059"	"30043"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.9"	""	"357.2"	""	"363.9"	""	"502.7"	""	"792.1"	"839.4"	""	"782"	"35"	"35.000"	"28.000"	"0.0118080112267719"	"27"	"0.002084"	"0.0188"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"707.90283"	"1414.79839"	"1414.79824"	"0.11"	"0.00007"	"12/62"	"12"	"62"	"3718261.60852051"	"HCD"	"MS2"	"0"	"323.5"	"100.000"	"85.6809"	"29819"	"29819"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.1"	""	"394.9"	""	"363.2"	""	"558.7"	""	"744.1"	"724.1"	""	"782"	"32"	"35.000"	"28.000"	"0.0255374046085162"	"24"	"0.002328"	"0.02214"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"707.90289"	"1414.79851"	"1414.79824"	"0.19"	"0.00014"	"12/62"	"12"	"62"	"4609207.22589111"	"HCD"	"MS2"	"0"	"398.1"	"100.000"	"86.2555"	"30020"	"30020"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"346.0"	""	"444.6"	""	"433.1"	""	"629.5"	""	"949.7"	"993.5"	""	"781"	"35"	"35.000"	"28.000"	"0.011684793405955"	"27"	"0.002525"	"0.02365"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"707.90308"	"1414.79888"	"1414.79824"	"0.45"	"0.00032"	"12/62"	"12"	"62"	"13354649.3059082"	"HCD"	"MS2"	"0"	"801.2"	"71.869"	"85.9690"	"29936"	"29936"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"697.1"	""	"924.1"	""	"853.0"	""	"1313.2"	"1.4"	"1945.8"	"1899.9"	""	"781"	"33"	"35.000"	"28.000"	"0.017483204528087"	"25"	"0.003317"	"0.03692"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQEFYK"	"[K].eLQEFYk.[D]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"P40241"	"CD9 antigen OS=Rattus norvegicus OX=10116 GN=Cd9 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"707.90308"	"1414.79888"	"1414.79824"	"0.45"	"0.00032"	"12/62"	"12"	"62"	"12398819.1474609"	"HCD"	"MS2"	"0"	"751.3"	"72.849"	"85.9558"	"29901"	"29901"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"644.0"	""	"828.4"	""	"807.0"	""	"1265.6"	""	"1847.0"	"1769.0"	""	"781"	"33"	"35.000"	"28.000"	"0.0177264201301904"	"26"	"0.003818"	"0.04191"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEYGEIK"	"[K].fAEYGEIk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"707.90332"	"1414.79936"	"1414.79824"	"0.80"	"0.00056"	"7/62"	"7"	"62"	"446848.787475586"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"85.1346"	"29598"	"29598"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.9"	""	"42.4"	""	"42.7"	""	"89.5"	""	"99.9"	"100.0"	""	"782"	"41"	"35.000"	"28.000"	"0.00317816731820163"	"28"	"0"	"0.0001781"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEYGEIK"	"[K].fAEYGEIk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"Q27W01"	"RNA-binding protein 8A OS=Rattus norvegicus OX=10116 GN=Rbm8a PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"707.90375"	"1414.80022"	"1414.79824"	"1.40"	"0.00099"	"7/62"	"7"	"62"	"359428.241149902"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"85.0799"	"29546"	"29546"	"29527"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"24.7"	""	"29.8"	""	"69.7"	""	"70.6"	"76.7"	""	"775"	"43"	"35.000"	"28.000"	"0.00200572647380845"	""	"0.0001686"	"0.001394"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEHTSQGAK"	"[R].vEHTSQGAk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"472.27274"	"1414.80365"	"1414.80545"	"-1.27"	"-0.00060"	"9/76"	"9"	"76"	"2456410.31762695"	"HCD"	"MS2"	"6.408313"	"134.3"	"100.000"	"20.6633"	"3577"	"3577"	"3550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.0"	""	"137.3"	""	"163.1"	""	"186.5"	"1.0"	"191.4"	"398.6"	""	"751"	"26"	"35.000"	"28.000"	"0.0872187667032094"	"19"	"0.0001686"	"0.001532"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEHTSQGAK"	"[R].vEHTSQGAk.[W]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"472.27313"	"1414.80484"	"1414.80545"	"-0.43"	"-0.00020"	"6/76"	"6"	"76"	"2248042.82116699"	"HCD"	"MS2"	"7.250986"	"129.2"	"100.000"	"20.6871"	"3549"	"3549"	"3522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.2"	""	"146.4"	""	"159.9"	""	"160.4"	"1.5"	"203.5"	"349.7"	""	"785"	"26"	"35.000"	"28.000"	"0.0924356843929184"	"19"	"0.0001991"	"0.002304"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELPSVVR"	"[R].aEVSELPSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"707.90704"	"1414.80681"	"1414.81031"	"-2.47"	"-0.00175"	"7/92"	"7"	"92"	"841334.475524902"	"HCD"	"MS2"	"5.361704"	"51.4"	"100.000"	"78.9509"	"27094"	"27094"	"27073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.6"	""	"73.6"	""	"78.2"	""	"80.4"	"1.4"	"85.3"	"84.5"	""	"767"	"42"	"35.000"	"28.000"	"0.00223236584015129"	""	"0"	"0.000189"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVSELPSVVR"	"[R].aEVSELPSVVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"707.90717"	"1414.80705"	"1414.81031"	"-2.30"	"-0.00163"	"7/92"	"7"	"92"	"1278124.65106201"	"HCD"	"MS2"	"15.06996"	"69.3"	"100.000"	"78.9004"	"27047"	"27047"	"27024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.1"	""	"95.4"	""	"103.2"	""	"106.8"	"2.3"	"119.6"	"119.0"	""	"743"	"41"	"35.000"	"28.000"	"0.00283764993599112"	""	"0"	"0.0003321"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"707.90820"	"1414.80913"	"1414.81031"	"-0.83"	"-0.00059"	"7/94"	"7"	"94"	"184030.688537598"	"HCD"	"MS2"	"19.68948"	"14.7"	"100.000"	"99.8549"	"35533"	"35533"	"35511"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"18.4"	""	"21.5"	""	"19.9"	""	"27.3"	"32.3"	""	"751"	"28"	"35.000"	"28.000"	"0.0593758638746029"	"23"	"9.9E-05"	"0.0005851"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"707.90845"	"1414.80962"	"1414.81031"	"-0.49"	"-0.00035"	"8/94"	"8"	"94"	"1561684.47796631"	"HCD"	"MS2"	"2.455908"	"75.4"	"100.000"	"99.3610"	"35333"	"35333"	"35319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.7"	""	"89.3"	""	"80.2"	""	"132.2"	""	"160.5"	"166.6"	""	"757"	"55"	"35.000"	"28.000"	"0.000113518301343683"	"28"	"0"	"4.484E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVNEAELLR"	"[K].lEVNEAELLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"707.90875"	"1414.81023"	"1414.81031"	"-0.06"	"-0.00004"	"8/94"	"8"	"94"	"1301909.47637939"	"HCD"	"MS2"	"7.205569"	"66.6"	"100.000"	"99.2838"	"35273"	"35273"	"35254"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.5"	""	"78.3"	""	"67.1"	""	"119.9"	"0.4"	"149.7"	"146.2"	""	"759"	"53"	"35.000"	"28.000"	"0.000203334831526313"	"28"	"0"	"5.421E-06"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEALIPVINK"	"[-].mEALIPVINk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"707.91223"	"1414.81719"	"1414.81770"	"-0.37"	"-0.00026"	"9/74"	"9"	"74"	"417444.181213379"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"112.6502"	"40598"	"40598"	"40575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"12.1"	""	"16.3"	""	"45.0"	""	"26.4"	"31.6"	""	"726"	"37"	"35.000"	"28.000"	"0.00702921172912618"	"15"	"0.0001686"	"0.001376"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEALIPVINK"	"[-].mEALIPVINk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"O35303"	"Dynamin-1-like protein OS=Rattus norvegicus OX=10116 GN=Dnm1l PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"707.91272"	"1414.81816"	"1414.81770"	"0.32"	"0.00023"	"10/74"	"10"	"74"	"593352.748657227"	"HCD"	"MS2"	"23.84392"	"20.7"	"100.000"	"112.5599"	"40548"	"40548"	"40521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"22.3"	""	"24.9"	""	"54.6"	""	"43.4"	"33.5"	""	"700"	"49"	"35.000"	"28.000"	"0.00043658422998503"	"17"	"0"	"0.000294"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDSYLFSLAR"	"[R].dDSYLFSLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P41740"	"Atrial natriuretic peptide receptor 3 OS=Rattus norvegicus OX=10116 GN=Npr3 PE=2 SV=1"	"P41740"	"Atrial natriuretic peptide receptor 3 OS=Rattus norvegicus OX=10116 GN=Npr3 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"708.37140"	"1415.73552"	"1415.73681"	"-0.91"	"-0.00064"	"6/84"	"6"	"84"	"137954.909790039"	"HCD"	"MS2"	"34.73228"	"10.2"	"100.000"	"107.8099"	"38683"	"38683"	"38668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"12.2"	""	"11.7"	""	"15.8"	""	"24.1"	"23.1"	""	"704"	"15"	"35.000"	"28.000"	"1.09784913360106"	"13"	"0.006423"	"0.08013"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPQEPIMK"	"[K].dPQEPIMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"708.39990"	"1415.79253"	"1415.79686"	"-3.06"	"-0.00216"	"7/72"	"7"	"72"	"804145.398498535"	"HCD"	"MS2"	"0"	"71.0"	"100.000"	"54.7165"	"17238"	"17238"	"17216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.7"	""	"83.8"	""	"106.0"	""	"90.2"	""	"147.7"	"157.7"	""	"901"	"32"	"36.000"	"29.000"	"0.0308812446016924"	"27"	"0.0001686"	"0.001408"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPQEPIMK"	"[K].dPQEPIMk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"708.40155"	"1415.79582"	"1415.79686"	"-0.73"	"-0.00052"	"7/72"	"7"	"72"	"1016570.59820557"	"HCD"	"MS2"	"21.91385"	"85.7"	"100.000"	"54.3853"	"17137"	"17137"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.5"	""	"110.0"	""	"117.2"	""	"108.9"	""	"184.3"	"181.2"	""	"894"	"30"	"36.000"	"29.000"	"0.0490125753676004"	"28"	"0.0001686"	"0.001213"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVIIESDLER"	"[K].lVIIESDLER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P04692"	"Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"708.41888"	"1415.83049"	"1415.83071"	"-0.15"	"-0.00011"	"5/80"	"5"	"80"	"118411.400390625"	"HCD"	"MS2"	"15.19068"	"7.6"	"100.000"	"108.2095"	"38832"	"38832"	"38823"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.3"	""	"7.7"	""	"9.3"	""	"14.2"	""	"14.6"	"14.8"	""	"784"	"30"	"35.000"	"28.000"	"0.0398369487605312"	"20"	"0.0009352"	"0.008065"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAQQIQK"	"[R].eLAQQIQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.4773"	"0.0000"	"1"	"1"	"1"	"708.43353"	"1415.85979"	"1415.86224"	"-1.73"	"-0.00122"	"7/64"	"7"	"64"	"375971.902832031"	"HCD"	"MS2"	"14.39497"	"35.0"	"100.000"	"54.9688"	"17375"	"17375"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.6"	""	"39.0"	""	"40.9"	""	"57.2"	""	"72.6"	"77.4"	""	"628"	"44"	"34.000"	"27.000"	"0.00117470724717425"	""	"9.9E-05"	"0.0008746"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAQQIQK"	"[R].eLAQQIQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"708.43396"	"1415.86064"	"1415.86224"	"-1.12"	"-0.00080"	"12/64"	"12"	"64"	"963734.125061035"	"HCD"	"MS2"	"35.96349"	"83.7"	"100.000"	"54.6358"	"17239"	"17239"	"17220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.7"	""	"105.7"	""	"110.8"	""	"135.7"	""	"164.5"	"164.7"	""	"615"	"36"	"34.000"	"27.000"	"0.00792218755778292"	""	"9.9E-05"	"0.0006625"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAQQIQK"	"[R].eLAQQIQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"708.43445"	"1415.86162"	"1415.86224"	"-0.43"	"-0.00031"	"12/64"	"12"	"64"	"414561.87878418"	"HCD"	"MS2"	"10.20254"	"36.8"	"100.000"	"55.3391"	"17492"	"17492"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"42.3"	""	"41.4"	""	"63.5"	""	"72.8"	"78.8"	""	"621"	"35"	"34.000"	"27.000"	"0.0107167131063783"	""	"0"	"0.0002462"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAQQIQK"	"[R].eLAQQIQk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"708.43494"	"1415.86260"	"1415.86224"	"0.26"	"0.00018"	"12/64"	"12"	"64"	"924968.895263672"	"HCD"	"MS2"	"28.85968"	"78.8"	"100.000"	"55.0040"	"17355"	"17355"	"17335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.2"	""	"93.2"	""	"99.7"	""	"115.6"	""	"158.1"	"160.9"	""	"620"	"37"	"34.000"	"27.000"	"0.00552537417908908"	""	"9.9E-05"	"0.000468"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEEQLVK"	"[R].vLEEQLVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6EV76"	"Alpha-(1,6)-fucosyltransferase OS=Rattus norvegicus OX=10116 GN=Fut8 PE=2 SV=1"	"Q6EV76"	"Alpha-(1,6)-fucosyltransferase OS=Rattus norvegicus OX=10116 GN=Fut8 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"708.44739"	"1415.88750"	"1415.88739"	"0.08"	"0.00006"	"11/64"	"11"	"64"	"261633.780761719"	"HCD"	"MS2"	"20.62397"	"22.3"	"100.000"	"89.0530"	"31141"	"31141"	"31119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"23.2"	""	"25.1"	""	"43.5"	"0.7"	"45.8"	"42.5"	""	"516"	"32"	"34.000"	"27.000"	"0.0172830229229464"	"23"	"0.0001686"	"0.001191"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLLEVQK"	"[R].eVLLEVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"708.44781"	"1415.88835"	"1415.88739"	"0.68"	"0.00048"	"6/66"	"6"	"66"	"324962.245300293"	"HCD"	"MS2"	"15.58278"	"20.5"	"100.000"	"92.2341"	"32459"	"32459"	"32437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"20.5"	""	"21.1"	""	"35.0"	""	"41.0"	"54.0"	""	"513"	"22"	"34.000"	"27.000"	"0.150344439197848"	"26"	"0.0001991"	"0.004727"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLLEVQK"	"[R].eVLLEVQk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"708.44830"	"1415.88933"	"1415.88739"	"1.37"	"0.00097"	"12/66"	"12"	"66"	"348920.756286621"	"HCD"	"MS2"	"20.51644"	"20.5"	"100.000"	"92.3132"	"32456"	"32456"	"32436"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"19.5"	""	"27.2"	""	"30.0"	""	"43.5"	"51.4"	""	"509"	"23"	"34.000"	"27.000"	"0.143115867260944"	""	"0.0001991"	"0.002494"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"708.87372"	"1416.74016"	"1416.74112"	"-0.68"	"-0.00048"	"7/64"	"7"	"64"	"574452.077575684"	"HCD"	"MS2"	"12.8391"	"59.7"	"100.000"	"89.0843"	"31192"	"31192"	"31178"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.9"	""	"67.4"	""	"70.1"	""	"120.0"	""	"119.3"	"104.9"	""	"801"	"27"	"36.000"	"29.000"	"0.0745765898233478"	"19"	"0.0001686"	"0.001834"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"708.87396"	"1416.74065"	"1416.74112"	"-0.33"	"-0.00023"	"7/64"	"7"	"64"	"580798.475830078"	"HCD"	"MS2"	"8.879192"	"58.1"	"100.000"	"89.1846"	"31193"	"31193"	"31182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.6"	""	"63.2"	""	"73.8"	""	"106.9"	"0.6"	"117.8"	"100.5"	""	"801"	"39"	"36.000"	"29.000"	"0.00501883040564036"	"23"	"0.0001686"	"0.00141"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"708.87415"	"1416.74101"	"1416.74112"	"-0.07"	"-0.00005"	"12/64"	"12"	"64"	"636518.788879395"	"HCD"	"MS2"	"2.493651"	"64.8"	"100.000"	"89.3638"	"31304"	"31304"	"31291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.5"	""	"73.5"	""	"79.0"	""	"120.8"	""	"130.4"	"119.9"	""	"819"	"35"	"36.000"	"29.000"	"0.0135598194247121"	"18"	"9.9E-05"	"0.0007317"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDFTEFGK"	"[R].dDFTEFGk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"708.87433"	"1416.74138"	"1416.74112"	"0.19"	"0.00013"	"7/64"	"7"	"64"	"633067.877868652"	"HCD"	"MS2"	"0"	"65.3"	"100.000"	"89.4710"	"31307"	"31307"	"31297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.8"	""	"78.5"	""	"85.3"	""	"118.4"	""	"126.6"	"114.9"	""	"819"	"44"	"36.000"	"29.000"	"0.00182916930985819"	"20"	"9.9E-05"	"0.0006261"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRDLEDSLAR"	"[K].lRDLEDSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"1"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"472.93799"	"1416.79941"	"1416.80081"	"-0.99"	"-0.00047"	"10/96"	"10"	"96"	"2917523.61322021"	"HCD"	"MS2"	"20.49013"	"80.2"	"100.000"	"76.0180"	"25880"	"25880"	"25865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"73.1"	""	"68.7"	""	"143.6"	""	"185.0"	"221.7"	""	"961"	"46"	"36.000"	"29.000"	"0.00128734038007555"	"25"	"0"	"0.0002434"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRDLEDSLAR"	"[K].lRDLEDSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"1"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"472.93811"	"1416.79978"	"1416.80081"	"-0.73"	"-0.00034"	"8/96"	"8"	"96"	"2673250.89874268"	"HCD"	"MS2"	"35.93608"	"81.8"	"100.000"	"75.8715"	"25852"	"25852"	"25836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.1"	""	"76.4"	""	"76.7"	""	"143.5"	"0.8"	"187.7"	"200.5"	""	"961"	"34"	"36.000"	"29.000"	"0.0191731465585009"	"20"	"9.9E-05"	"0.0009407"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRDLEDSLAR"	"[K].lRDLEDSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"1"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"472.93851"	"1416.80097"	"1416.80081"	"0.11"	"0.00005"	"8/96"	"8"	"96"	"2547328.53057861"	"HCD"	"MS2"	"35.4464"	"72.8"	"100.000"	"75.7301"	"25763"	"25763"	"25743"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.4"	""	"79.7"	""	"69.2"	""	"125.7"	"0.1"	"154.2"	"179.1"	""	"932"	"42"	"36.000"	"29.000"	"0.0030506045711535"	"25"	"9.9E-05"	"0.0005957"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STSVPENPK"	"[R].sTSVPENPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06536"	"Glucocorticoid receptor OS=Rattus norvegicus OX=10116 GN=Nr3c1 PE=1 SV=2"	"P06536"	"Glucocorticoid receptor OS=Rattus norvegicus OX=10116 GN=Nr3c1 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"708.90881"	"1416.81035"	"1416.80987"	"0.34"	"0.00024"	"6/78"	"6"	"78"	"324333.541259766"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"37.3594"	"10228"	"10228"	"10200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"25.0"	""	"30.6"	""	"44.1"	"0.8"	"42.9"	"34.6"	""	"898"	"18"	"36.000"	"29.000"	"0.641573387371485"	"19"	"0.002711"	"0.02899"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLTELEATVR"	"[K].rLTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"1"	"3"	"3"	"0.7381"	"0.0000"	"1"	"1"	"1"	"472.95026"	"1416.83622"	"1416.83719"	"-0.69"	"-0.00033"	"9/100"	"9"	"100"	"2101675.36468506"	"HCD"	"MS2"	"34.99806"	"63.2"	"100.000"	"52.2263"	"16222"	"16222"	"16195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.0"	""	"83.5"	""	"94.9"	""	"105.8"	""	"114.7"	"108.3"	""	"723"	"42"	"35.000"	"28.000"	"0.00247803993862637"	"26"	"9.9E-05"	"0.0004723"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLTELEATVR"	"[K].rLTELEATVR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"Q6AYH5"	"Dynactin subunit 2 OS=Rattus norvegicus OX=10116 GN=Dctn2 PE=1 SV=1"	"1"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"472.95047"	"1416.83686"	"1416.83719"	"-0.24"	"-0.00011"	"9/100"	"9"	"100"	"2066987.79412842"	"HCD"	"MS2"	"36.48867"	"66.3"	"100.000"	"51.9247"	"16133"	"16133"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.1"	""	"97.0"	""	"85.1"	""	"99.6"	"2.0"	"134.1"	"130.8"	""	"719"	"43"	"35.000"	"28.000"	"0.00163945271284491"	"23"	"9.9E-05"	"0.0005392"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVVEQEK"	"[K].lNVVEQEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.3415"	"0.0000"	"1"	"1"	"1"	"708.92645"	"1416.84563"	"1416.84625"	"-0.44"	"-0.00031"	"7/72"	"7"	"72"	"1015177.04205322"	"HCD"	"MS2"	"38.68364"	"84.5"	"100.000"	"64.9455"	"21387"	"21387"	"21364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.5"	""	"104.1"	""	"106.1"	""	"129.0"	""	"167.7"	"152.0"	""	"710"	"41"	"35.000"	"28.000"	"0.00309904835777779"	""	"9.9E-05"	"0.0008206"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVVEQEK"	"[K].lNVVEQEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.3023"	"0.0000"	"1"	"1"	"1"	"708.92657"	"1416.84587"	"1416.84625"	"-0.27"	"-0.00019"	"14/72"	"14"	"72"	"1934089.37213135"	"HCD"	"MS2"	"1.378172"	"148.1"	"100.000"	"65.2732"	"21554"	"21554"	"21536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.2"	""	"162.3"	""	"186.5"	""	"239.8"	""	"301.9"	"288.5"	""	"709"	"43"	"35.000"	"28.000"	"0.00175637092640298"	""	"0.0001686"	"0.001283"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVVEQEK"	"[K].lNVVEQEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"708.92664"	"1416.84599"	"1416.84625"	"-0.18"	"-0.00013"	"12/72"	"12"	"72"	"1066268.27441406"	"HCD"	"MS2"	"31.86995"	"92.8"	"100.000"	"64.9628"	"21428"	"21428"	"21404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.6"	"2.0"	"114.7"	""	"109.3"	""	"144.4"	""	"183.5"	"172.5"	""	"709"	"34"	"35.000"	"28.000"	"0.0150874637455912"	""	"0.0001686"	"0.001223"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNVVEQEK"	"[K].lNVVEQEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"0.3111"	"0.0000"	"1"	"1"	"1"	"708.92670"	"1416.84612"	"1416.84625"	"-0.09"	"-0.00007"	"14/72"	"14"	"72"	"2090363.26123047"	"HCD"	"MS2"	"0"	"157.2"	"100.000"	"65.2403"	"21507"	"21507"	"21489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.4"	""	"171.2"	""	"196.3"	""	"253.9"	""	"320.6"	"318.5"	""	"707"	"45"	"35.000"	"28.000"	"0.00118137946649231"	""	"0.0001686"	"0.001252"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEELAGLK"	"[R].aQEELAGLk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"708.92676"	"1416.84624"	"1416.84625"	"-0.01"	"-0.00001"	"8/80"	"8"	"80"	"1218125.97424316"	"HCD"	"MS2"	"38.81411"	"84.5"	"100.000"	"72.1920"	"24326"	"24326"	"24304"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.1"	""	"102.0"	""	"117.2"	""	"106.9"	"1.3"	"167.6"	"176.5"	""	"707"	"30"	"35.000"	"28.000"	"0.0348649798170633"	"28"	"9.9E-05"	"0.0004332"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQEELAGLK"	"[R].aQEELAGLk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"708.92712"	"1416.84697"	"1416.84625"	"0.51"	"0.00036"	"8/80"	"8"	"80"	"1153590.71508789"	"HCD"	"MS2"	"41.1752"	"79.0"	"100.000"	"72.2790"	"24391"	"24391"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.8"	""	"99.9"	""	"105.2"	""	"106.6"	""	"150.4"	"165.6"	""	"710"	"35"	"35.000"	"28.000"	"0.0118912730901029"	"27"	"0"	"0.0001106"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"709.33337"	"1417.65947"	"1417.66193"	"-1.74"	"-0.00123"	"7/80"	"7"	"80"	"693521.442077637"	"HCD"	"MS2"	"26.55922"	"40.7"	"100.000"	"66.2402"	"21949"	"21949"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"46.5"	""	"48.1"	""	"62.4"	""	"85.9"	"86.3"	""	"285"	"14"	"31.000"	"24.000"	"0.620604420001935"	"19"	"0.004213"	"0.04647"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"709.33405"	"1417.66081"	"1417.66193"	"-0.79"	"-0.00056"	"6/80"	"6"	"80"	"495221.266479492"	"HCD"	"MS2"	"26.69347"	"34.8"	"100.000"	"68.5935"	"22900"	"22900"	"22874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.6"	""	"47.3"	""	"49.2"	""	"48.2"	"0.2"	"62.5"	"69.0"	""	"288"	"16"	"31.000"	"24.000"	"0.353478083858644"	"19"	"0.008926"	"0.116"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33405"	"1417.66081"	"1417.66193"	"-0.79"	"-0.00056"	"14/80"	"14"	"80"	"845568.078308105"	"HCD"	"MS2"	"61.16167"	"64.2"	"100.000"	"71.1609"	"23910"	"23910"	"23886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.7"	""	"80.0"	""	"87.7"	""	"98.1"	"2.5"	"130.2"	"126.5"	""	"288"	"11"	"31.000"	"24.000"	"1.13334593716094"	"13"	"0.004392"	"0.05186"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"709.33417"	"1417.66106"	"1417.66193"	"-0.62"	"-0.00044"	"12/80"	"12"	"80"	"597054.833068848"	"HCD"	"MS2"	"55.17193"	"42.7"	"100.000"	"73.9925"	"25059"	"25059"	"25037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"62.3"	""	"58.3"	""	"57.4"	""	"75.3"	"84.4"	""	"292"	"16"	"31.000"	"24.000"	"0.331400268375038"	"16"	"0.008289"	"0.1057"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"10/80"	"10"	"80"	"452417.799377441"	"HCD"	"MS2"	"29.36854"	"28.3"	"100.000"	"67.2665"	"22360"	"22360"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.5"	""	"41.0"	""	"37.6"	""	"41.1"	""	"61.8"	"49.2"	""	"292"	"26"	"31.000"	"24.000"	"0.0338339618895398"	"24"	"0.000885"	"0.007806"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"6/80"	"6"	"80"	"420464.295654297"	"HCD"	"MS2"	"53.01853"	"24.2"	"100.000"	"73.2055"	"24768"	"24768"	"24744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"31.0"	""	"34.8"	""	"32.9"	""	"42.0"	"50.4"	""	"292"	"18"	"31.000"	"24.000"	"0.232998355496563"	"20"	"0.0073"	"0.09242"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"8/80"	"8"	"80"	"503183.12097168"	"HCD"	"MS2"	"28.64389"	"31.5"	"100.000"	"68.3596"	"22772"	"22772"	"22748"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.1"	""	"39.2"	""	"45.2"	""	"42.2"	"0.3"	"63.9"	"59.5"	""	"292"	"24"	"31.000"	"24.000"	"0.060583290224617"	"19"	"0.001615"	"0.01417"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"7/80"	"7"	"80"	"496199.769897461"	"HCD"	"MS2"	"34.49178"	"32.2"	"100.000"	"66.9395"	"22228"	"22228"	"22203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.7"	""	"39.9"	""	"44.2"	""	"38.8"	"1.0"	"69.6"	"65.0"	""	"292"	"26"	"31.000"	"24.000"	"0.0385791678569004"	"18"	"0.001951"	"0.01678"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"8/80"	"8"	"80"	"542323.798278809"	"HCD"	"MS2"	"45.47777"	"35.5"	"100.000"	"69.2349"	"23127"	"23127"	"23108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.7"	""	"44.5"	""	"51.7"	""	"55.2"	""	"73.1"	"61.1"	""	"292"	"22"	"31.000"	"24.000"	"0.100775011360675"	"14"	"0.004852"	"0.06026"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"709.33423"	"1417.66118"	"1417.66193"	"-0.53"	"-0.00038"	"7/80"	"7"	"80"	"509900.818847656"	"HCD"	"MS2"	"43.12988"	"26.0"	"100.000"	"75.1574"	"25562"	"25562"	"25534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"29.5"	""	"37.0"	""	"26.3"	""	"57.7"	"52.2"	""	"292"	"17"	"31.000"	"24.000"	"0.306445223009034"	"24"	"0.009781"	"0.1307"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"709.33429"	"1417.66130"	"1417.66193"	"-0.44"	"-0.00031"	"7/80"	"7"	"80"	"436535.808166504"	"HCD"	"MS2"	"27.94337"	"29.0"	"100.000"	"64.6629"	"21272"	"21272"	"21247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.4"	""	"38.0"	""	"42.0"	""	"39.5"	"0.3"	"54.7"	"51.3"	""	"293"	"21"	"31.000"	"24.000"	"0.119079670618041"	"18"	"0.007681"	"0.09775"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"709.33429"	"1417.66130"	"1417.66193"	"-0.44"	"-0.00031"	"12/80"	"12"	"80"	"448954.833862305"	"HCD"	"MS2"	"29.6436"	"27.9"	"100.000"	"73.5374"	"24903"	"24903"	"24881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.0"	""	"44.6"	""	"45.7"	""	"26.4"	"2.5"	"48.7"	"50.9"	""	"293"	"16"	"31.000"	"24.000"	"0.357962575969667"	"17"	"0.007563"	"0.0968"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"709.33429"	"1417.66130"	"1417.66193"	"-0.44"	"-0.00031"	"13/80"	"13"	"80"	"435822.963867188"	"HCD"	"MS2"	"46.66045"	"27.7"	"100.000"	"73.6745"	"24930"	"24930"	"24905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"31.5"	""	"41.9"	""	"33.5"	"1.9"	"58.2"	"56.1"	""	"293"	"15"	"31.000"	"24.000"	"0.460084523652866"	"18"	"0.002525"	"0.02428"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.33429"	"1417.66130"	"1417.66193"	"-0.44"	"-0.00031"	"9/80"	"9"	"80"	"534401.274353027"	"HCD"	"MS2"	"45.62046"	"33.3"	"100.000"	"67.6684"	"22492"	"22492"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"46.7"	""	"49.4"	""	"44.9"	"0.1"	"63.0"	"70.2"	""	"293"	"30"	"31.000"	"24.000"	"0.0156616539806119"	"20"	"0.0001686"	"0.001918"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"709.33429"	"1417.66130"	"1417.66193"	"-0.44"	"-0.00031"	"13/80"	"13"	"80"	"3387788.0256958"	"HCD"	"MS2"	"0"	"107.1"	"100.000"	"52.5905"	"16405"	"16405"	"16388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.3"	""	"123.3"	""	"145.5"	""	"187.3"	"3.1"	"212.0"	"189.9"	""	"293"	"39"	"31.000"	"24.000"	"0.00194016034906018"	"16"	"0.0001991"	"0.004403"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"709.33435"	"1417.66142"	"1417.66193"	"-0.36"	"-0.00025"	"6/80"	"6"	"80"	"560495.890014648"	"HCD"	"MS2"	"31.99344"	"36.4"	"100.000"	"69.2273"	"23158"	"23158"	"23136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.6"	""	"39.7"	""	"49.4"	""	"47.5"	"2.9"	"80.4"	"73.1"	""	"293"	"20"	"31.000"	"24.000"	"0.145156879926791"	"18"	"0.007989"	"0.1011"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33435"	"1417.66142"	"1417.66193"	"-0.36"	"-0.00025"	"9/80"	"9"	"80"	"3764616.09936523"	"HCD"	"MS2"	"0"	"123.0"	"100.000"	"52.8873"	"16492"	"16492"	"16475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.8"	""	"156.4"	""	"178.3"	""	"231.0"	"1.7"	"218.4"	"201.4"	""	"293"	"39"	"31.000"	"24.000"	"0.0016859225698036"	"15"	"0.0001686"	"0.001527"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"709.33441"	"1417.66155"	"1417.66193"	"-0.27"	"-0.00019"	"5/80"	"5"	"80"	"496510.967163086"	"HCD"	"MS2"	"49.5293"	"32.0"	"100.000"	"61.0010"	"19821"	"19821"	"19800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.9"	""	"39.3"	""	"32.9"	""	"48.2"	""	"72.6"	"72.8"	""	"291"	"3"	"31.000"	"24.000"	"7.04470794834865"	"15"	"0.008135"	"0.1025"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"709.33441"	"1417.66155"	"1417.66193"	"-0.27"	"-0.00019"	"12/80"	"12"	"80"	"3872606.87719727"	"HCD"	"MS2"	"0"	"121.1"	"100.000"	"52.2866"	"16280"	"16280"	"16262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.9"	""	"137.3"	""	"166.3"	""	"232.0"	"1.2"	"215.6"	"214.8"	""	"291"	"36"	"31.000"	"24.000"	"0.00328747904567152"	"15"	"0"	"0.0002256"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"709.33447"	"1417.66167"	"1417.66193"	"-0.19"	"-0.00013"	"6/80"	"6"	"80"	"450233.208496094"	"HCD"	"MS2"	"38.04491"	"26.1"	"100.000"	"73.3680"	"24805"	"24805"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.9"	""	"37.5"	""	"35.3"	""	"33.6"	""	"51.9"	"52.9"	""	"293"	"17"	"31.000"	"24.000"	"0.319769932085"	"14"	"0.007104"	"0.09044"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"709.33453"	"1417.66179"	"1417.66193"	"-0.10"	"-0.00007"	"7/80"	"7"	"80"	"429965.372619629"	"HCD"	"MS2"	"48.45987"	"24.1"	"100.000"	"74.9766"	"25457"	"25457"	"25432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.7"	""	"36.1"	""	"31.1"	""	"26.7"	"0.7"	"43.5"	"49.2"	""	"293"	"15"	"31.000"	"24.000"	"0.486225380314574"	"20"	"0.004314"	"0.05066"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"709.33453"	"1417.66179"	"1417.66193"	"-0.10"	"-0.00007"	"7/80"	"7"	"80"	"545013.754272461"	"HCD"	"MS2"	"35.15191"	"34.2"	"100.000"	"68.2754"	"22770"	"22770"	"22746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"38.3"	""	"47.1"	""	"45.8"	""	"68.7"	"62.7"	""	"293"	"17"	"31.000"	"24.000"	"0.27279576552111"	"18"	"0.004959"	"0.06231"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"709.33453"	"1417.66179"	"1417.66193"	"-0.10"	"-0.00007"	"8/80"	"8"	"80"	"3811782.98150635"	"HCD"	"MS2"	"0.7914065"	"123.7"	"100.000"	"52.5929"	"16372"	"16372"	"16355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.7"	""	"152.7"	""	"180.7"	""	"223.6"	"4.1"	"205.4"	"216.3"	""	"293"	"35"	"31.000"	"24.000"	"0.00441405382543267"	"18"	"0.0001991"	"0.003115"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"709.33459"	"1417.66191"	"1417.66193"	"-0.01"	"-0.00001"	"8/80"	"8"	"80"	"563906.075134277"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"66.1403"	"21875"	"21875"	"21849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.0"	""	"43.5"	""	"58.4"	""	"56.4"	""	"78.1"	"74.2"	""	"293"	"26"	"31.000"	"24.000"	"0.0341851606124167"	"16"	"0.002588"	"0.02644"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"709.33466"	"1417.66203"	"1417.66193"	"0.07"	"0.00005"	"7/80"	"7"	"80"	"338489.465209961"	"HCD"	"MS2"	"6.736425"	"20.7"	"100.000"	"53.2186"	"16627"	"16627"	"16602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"25.6"	""	"24.3"	""	"34.8"	""	"45.4"	"38.3"	""	"293"	"25"	"31.000"	"24.000"	"0.0479554117997498"	"23"	"0.00452"	"0.0525"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.33472"	"1417.66216"	"1417.66193"	"0.16"	"0.00011"	"7/80"	"7"	"80"	"496243.590454102"	"HCD"	"MS2"	"15.11202"	"27.8"	"100.000"	"67.0397"	"22237"	"22237"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.3"	""	"31.7"	""	"37.8"	""	"37.5"	""	"63.2"	"50.7"	""	"295"	"36"	"31.000"	"24.000"	"0.00398833858706055"	"21"	"0.001827"	"0.0153"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"709.33478"	"1417.66228"	"1417.66193"	"0.24"	"0.00017"	"11/80"	"11"	"80"	"526632.863525391"	"HCD"	"MS2"	"35.34881"	"32.9"	"100.000"	"67.9392"	"22633"	"22633"	"22611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"39.7"	""	"49.6"	""	"42.6"	""	"67.6"	"66.8"	""	"295"	"17"	"31.000"	"24.000"	"0.287602078464312"	"18"	"0.008868"	"0.1123"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"709.33490"	"1417.66252"	"1417.66193"	"0.42"	"0.00030"	"9/80"	"9"	"80"	"785557.331176758"	"HCD"	"MS2"	"23.66806"	"42.6"	"100.000"	"52.2977"	"16251"	"16251"	"16227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.0"	""	"57.8"	""	"52.5"	""	"81.7"	"0.2"	"76.3"	"69.7"	""	"295"	"41"	"31.000"	"24.000"	"0.00126996578447229"	"19"	"0.0001991"	"0.002708"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.33496"	"1417.66265"	"1417.66193"	"0.50"	"0.00036"	"13/80"	"13"	"80"	"631460.583190918"	"HCD"	"MS2"	"64.96481"	"49.2"	"100.000"	"74.4750"	"25285"	"25285"	"25261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.1"	""	"77.4"	""	"73.8"	""	"67.7"	""	"85.2"	"88.5"	""	"299"	"13"	"31.000"	"24.000"	"0.777394014817607"	"13"	"0.003357"	"0.03748"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"709.33508"	"1417.66289"	"1417.66193"	"0.68"	"0.00048"	"11/80"	"11"	"80"	"458742.421691895"	"HCD"	"MS2"	"15.11447"	"33.2"	"100.000"	"64.7168"	"21328"	"21328"	"21307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"37.6"	""	"46.9"	""	"44.7"	"0.1"	"74.7"	"64.2"	""	"299"	"28"	"31.000"	"24.000"	"0.0234769239247866"	"18"	"0.006613"	"0.0827"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"709.33508"	"1417.66289"	"1417.66193"	"0.68"	"0.00048"	"10/80"	"10"	"80"	"857174.810913086"	"HCD"	"MS2"	"33.40511"	"44.0"	"100.000"	"51.9731"	"16153"	"16153"	"16123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.7"	""	"53.9"	"2.2"	"55.8"	""	"81.0"	""	"83.6"	"73.6"	""	"299"	"33"	"31.000"	"24.000"	"0.00735599105843769"	"18"	"0.0001686"	"0.001763"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPAMSDAYDR"	"[R].fPAmSDAYDR.[D]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"709.33594"	"1417.66460"	"1417.66193"	"1.88"	"0.00133"	"8/80"	"8"	"80"	"490933.897888184"	"HCD"	"MS2"	"26.09716"	"29.8"	"100.000"	"67.3621"	"22368"	"22368"	"22343"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.7"	""	"42.8"	""	"40.0"	""	"42.9"	""	"55.0"	"58.9"	""	"322"	"39"	"32.000"	"25.000"	"0.00217183024097256"	""	"0.001488"	"0.01259"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"709.35236"	"1417.69744"	"1417.69832"	"-0.62"	"-0.00044"	"14/80"	"14"	"80"	"1497175.42449951"	"HCD"	"MS2"	"22.30426"	"71.2"	"100.000"	"61.5592"	"20013"	"20013"	"19989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.1"	""	"74.2"	""	"85.3"	""	"188.6"	"0.1"	"128.1"	"126.9"	""	"554"	"24"	"34.000"	"27.000"	"0.117079206151572"	"18"	"0.0001991"	"0.003099"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"709.35248"	"1417.69768"	"1417.69832"	"-0.45"	"-0.00032"	"6/80"	"6"	"80"	"2074572.94573975"	"HCD"	"MS2"	"11.18591"	"101.9"	"100.000"	"62.0421"	"20241"	"20241"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.8"	""	"98.0"	""	"114.1"	""	"290.3"	""	"188.2"	"180.8"	""	"551"	"24"	"34.000"	"27.000"	"0.118065117369495"	"20"	"0.0001991"	"0.004605"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"709.35260"	"1417.69792"	"1417.69832"	"-0.28"	"-0.00020"	"6/80"	"6"	"80"	"1535452.39831543"	"HCD"	"MS2"	"11.57667"	"74.5"	"100.000"	"61.8535"	"20132"	"20132"	"20115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.7"	""	"71.1"	""	"83.8"	""	"196.8"	""	"149.4"	"132.7"	""	"549"	"26"	"34.000"	"27.000"	"0.0618788663735842"	"19"	"0.0001991"	"0.002993"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"709.35260"	"1417.69792"	"1417.69832"	"-0.28"	"-0.00020"	"7/80"	"7"	"80"	"1263631.80285645"	"HCD"	"MS2"	"34.19664"	"61.8"	"100.000"	"61.4384"	"19999"	"19999"	"19974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.3"	""	"74.3"	""	"72.7"	""	"160.8"	""	"112.2"	"106.4"	""	"549"	"25"	"34.000"	"27.000"	"0.0925853662268595"	"19"	"0.001488"	"0.01228"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"709.35278"	"1417.69829"	"1417.69832"	"-0.02"	"-0.00001"	"6/80"	"6"	"80"	"1553833.55291748"	"HCD"	"MS2"	"12.34651"	"73.9"	"100.000"	"62.1682"	"20259"	"20259"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.4"	""	"84.7"	""	"92.2"	""	"199.8"	"1.5"	"138.2"	"116.2"	""	"549"	"27"	"34.000"	"27.000"	"0.059093858618184"	"22"	"0.0005778"	"0.007139"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVMQEEFSR"	"[K].fVmQEEFSR.[D]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"709.35278"	"1417.69829"	"1417.69832"	"-0.02"	"-0.00001"	"6/80"	"6"	"80"	"1715427.93743896"	"HCD"	"MS2"	"8.821352"	"81.5"	"100.000"	"61.7448"	"20121"	"20121"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.9"	""	"84.7"	""	"95.4"	""	"228.5"	"0.5"	"147.1"	"143.9"	""	"549"	"25"	"34.000"	"27.000"	"0.0913150473792041"	"21"	"0.0001991"	"0.004982"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SWQGLDEVVR"	"[R].sWQGLDEVVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63616"	"Vacuolar protein sorting-associated protein 33B OS=Rattus norvegicus OX=10116 GN=Vps33b PE=2 SV=1"	"Q63616"	"Vacuolar protein sorting-associated protein 33B OS=Rattus norvegicus OX=10116 GN=Vps33b PE=2 SV=1"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"709.38495"	"1417.76262"	"1417.76369"	"-0.76"	"-0.00054"	"6/98"	"6"	"98"	"193716.640625"	"HCD"	"MS2"	"26.42601"	"15.0"	"100.000"	"94.6549"	"33400"	"33400"	"33380"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"17.7"	""	"20.7"	""	"27.4"	""	"28.2"	"26.7"	""	"921"	"33"	"36.000"	"29.000"	"0.0250166777652266"	"22"	"0.004234"	"0.04922"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTEEGDAPK"	"[K].lTEEGDAPk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"709.39978"	"1417.79228"	"1417.79388"	"-1.13"	"-0.00080"	"12/72"	"12"	"72"	"787958.070129395"	"HCD"	"MS2"	"44.52841"	"61.1"	"100.000"	"44.3960"	"13082"	"13082"	"13064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.1"	""	"37.8"	""	"61.1"	""	"145.9"	"2.1"	"136.4"	"134.1"	""	"972"	"35"	"36.000"	"29.000"	"0.0162418789452692"	"23"	"9.9E-05"	"0.0004141"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTEEGDAPK"	"[K].lTEEGDAPk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"709.40143"	"1417.79558"	"1417.79388"	"1.20"	"0.00085"	"12/72"	"12"	"72"	"790718.08203125"	"HCD"	"MS2"	"34.91518"	"63.6"	"100.000"	"44.6249"	"13140"	"13140"	"13121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"54.5"	""	"59.3"	""	"158.8"	"2.8"	"138.1"	"130.4"	""	"1028"	"38"	"37.000"	"30.000"	"0.00767296326523604"	"24"	"0.0001686"	"0.001294"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALPTWDK"	"[R].eALPTWDk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"709.40741"	"1417.80754"	"1417.80914"	"-1.12"	"-0.00080"	"5/68"	"5"	"68"	"327241.609924316"	"HCD"	"MS2"	"39.58922"	"28.4"	"100.000"	"86.7345"	"30242"	"30242"	"30223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"40.2"	""	"38.3"	""	"44.8"	"0.6"	"54.7"	"49.4"	""	"1011"	"25"	"37.000"	"30.000"	"0.173269116099231"	"21"	"0.004819"	"0.05895"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALPTWDK"	"[R].eALPTWDk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"709.40802"	"1417.80876"	"1417.80914"	"-0.26"	"-0.00019"	"6/68"	"6"	"68"	"478107.795288086"	"HCD"	"MS2"	"20.57111"	"38.6"	"100.000"	"86.6544"	"30176"	"30176"	"30158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.7"	""	"52.7"	""	"54.2"	""	"60.6"	""	"71.4"	"69.0"	""	"1024"	"27"	"37.000"	"30.000"	"0.10453698276708"	"23"	"0.003043"	"0.03283"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"709.40845"	"1417.80962"	"1417.80998"	"-0.25"	"-0.00018"	"13/86"	"13"	"86"	"579125.09387207"	"HCD"	"MS2"	"3.747689"	"29.5"	"100.000"	"108.9648"	"39125"	"39125"	"39120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"29.1"	""	"20.1"	""	"59.7"	""	"74.4"	"67.2"	""	"1019"	"46"	"37.000"	"30.000"	"0.00115118252492759"	""	"0"	"3.791E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"709.40887"	"1417.81047"	"1417.80998"	"0.35"	"0.00025"	"11/86"	"11"	"86"	"379169.503601074"	"HCD"	"MS2"	"6.031881"	"21.0"	"100.000"	"109.2239"	"39207"	"39207"	"39198"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"17.8"	""	"16.5"	""	"47.1"	""	"46.3"	"57.3"	""	"1019"	"36"	"37.000"	"30.000"	"0.0125934345188572"	"29"	"0"	"0.0001934"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"709.40894"	"1417.81059"	"1417.80998"	"0.44"	"0.00031"	"7/86"	"7"	"86"	"813892.375427246"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"108.6961"	"39010"	"39010"	"39000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"38.2"	""	"35.8"	""	"87.1"	""	"95.2"	"107.3"	""	"1019"	"45"	"37.000"	"30.000"	"0.00176662425305565"	"29"	"0"	"2.356E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"709.40906"	"1417.81084"	"1417.81131"	"-0.33"	"-0.00024"	"16/106"	"16"	"106"	"1418713.33288574"	"HCD"	"MS2"	"0"	"49.0"	"100.000"	"37.5238"	"10293"	"10293"	"10276"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.1"	""	"56.8"	""	"60.3"	""	"90.7"	""	"92.5"	"101.1"	""	"1014"	"45"	"37.000"	"30.000"	"0.00145884099627098"	"17"	"0"	"8.43E-07"	"1.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"709.40912"	"1417.81096"	"1417.81131"	"-0.25"	"-0.00018"	"12/106"	"12"	"106"	"1296964.02630615"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"37.5886"	"10284"	"10284"	"10263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.3"	""	"55.5"	""	"59.0"	""	"67.0"	""	"88.7"	"84.5"	""	"1014"	"58"	"37.000"	"30.000"	"8.74999811239033E-05"	"19"	"0"	"2.695E-07"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"709.40912"	"1417.81096"	"1417.80998"	"0.69"	"0.00049"	"9/86"	"9"	"86"	"3802784.06719971"	"HCD"	"MS2"	"0"	"165.3"	"100.000"	"109.2306"	"39225"	"39225"	"39220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.4"	""	"118.9"	""	"112.4"	""	"363.2"	""	"403.5"	"424.9"	""	"1014"	"51"	"37.000"	"30.000"	"0.000388157479704007"	""	"0"	"9.211E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"709.40912"	"1417.81096"	"1417.80998"	"0.69"	"0.00049"	"7/86"	"7"	"86"	"4080084.73907471"	"HCD"	"MS2"	"0"	"178.5"	"100.000"	"108.9545"	"39108"	"39108"	"39102"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.5"	""	"141.0"	""	"128.7"	""	"406.1"	""	"419.5"	"443.1"	""	"1014"	"43"	"37.000"	"30.000"	"0.00238785504483255"	""	"0"	"6.368E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDTIEIITDR"	"[K].iDTIEIITDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"709.40924"	"1417.81120"	"1417.80998"	"0.87"	"0.00061"	"11/86"	"11"	"86"	"345310.140991211"	"HCD"	"MS2"	"3.838297"	"20.4"	"100.000"	"109.4934"	"39321"	"39321"	"39312"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"17.0"	""	"17.8"	""	"45.3"	""	"43.7"	"48.8"	""	"1014"	"33"	"37.000"	"30.000"	"0.0243224858458801"	"30"	"0"	"0.0003871"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPAAAAAAPPGPR"	"[K].aAPAAAAAAPPGPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"P08461"	"Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.40936"	"1417.81145"	"1417.81131"	"0.10"	"0.00007"	"6/106"	"6"	"106"	"116365.084472656"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"37.9350"	"10424"	"10424"	"10394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.4"	""	"8.8"	""	"8.4"	""	"13.0"	""	"12.7"	"15.5"	""	"1014"	"9"	"37.000"	"30.000"	"6.19452427703589"	"13"	"0.002373"	"0.02247"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELERPGK"	"[R].mELERPGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"473.27908"	"1417.82270"	"1417.82374"	"-0.74"	"-0.00035"	"8/66"	"8"	"66"	"19096348.7282715"	"HCD"	"MS2"	"6.970434"	"659.5"	"66.540"	"43.1756"	"12549"	"12549"	"12530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"975.2"	""	"966.2"	""	"573.5"	""	"943.3"	"7.1"	"1476.5"	"1324.2"	""	"967"	"22"	"36.000"	"29.000"	"0.305067876056174"	"19"	"0.001872"	"0.01557"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELERPGK"	"[R].mELERPGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"473.27911"	"1417.82279"	"1417.82374"	"-0.67"	"-0.00032"	"8/66"	"8"	"66"	"17959687.8577881"	"HCD"	"MS2"	"6.045522"	"691.7"	"69.718"	"42.9938"	"12509"	"12509"	"12491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1015.6"	""	"1006.8"	""	"591.4"	""	"996.4"	"2.9"	"1568.5"	"1391.0"	""	"974"	"14"	"36.000"	"29.000"	"1.96123195716499"	"15"	"0.002462"	"0.02325"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELERPGK"	"[R].mELERPGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"3"	"473.27914"	"1417.82288"	"1417.82374"	"-0.61"	"-0.00029"	"6/66"	"6"	"66"	"1662486.57757568"	"HCD"	"MS2"	"31.96967"	"105.8"	"100.000"	"43.3965"	"12674"	"12674"	"12651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.4"	""	"139.8"	""	"126.5"	""	"150.4"	"2.0"	"216.4"	"215.5"	""	"974"	"3"	"36.000"	"29.000"	"27.38602253677"	"14"	"0.006198"	"0.07562"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MELERPGK"	"[R].mELERPGk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"473.27939"	"1417.82361"	"1417.82374"	"-0.09"	"-0.00004"	"7/66"	"7"	"66"	"2208386.86547852"	"HCD"	"MS2"	"18.78934"	"132.4"	"100.000"	"43.5022"	"12683"	"12683"	"12656"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.0"	""	"169.0"	""	"152.5"	""	"189.1"	"2.2"	"282.7"	"286.6"	""	"966"	"15"	"36.000"	"29.000"	"1.70980715743299"	"13"	"0.003317"	"0.03588"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESLALAVK"	"[K].eESLALAVk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"709.43652"	"1417.86577"	"1417.86665"	"-0.62"	"-0.00044"	"16/68"	"16"	"68"	"755284.570068359"	"HCD"	"MS2"	"22.75533"	"56.8"	"100.000"	"85.3772"	"29667"	"29667"	"29652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"59.7"	""	"62.0"	""	"99.9"	"0.9"	"113.8"	"133.5"	""	"715"	"59"	"35.000"	"28.000"	"4.61610890316838E-05"	"25"	"0"	"5.662E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESLALAVK"	"[K].eESLALAVk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"709.43689"	"1417.86650"	"1417.86665"	"-0.11"	"-0.00007"	"16/68"	"16"	"68"	"1208437.28808594"	"HCD"	"MS2"	"25.34665"	"87.9"	"100.000"	"85.4248"	"29716"	"29716"	"29699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.7"	""	"98.3"	""	"107.0"	""	"161.1"	"1.3"	"181.6"	"178.6"	""	"715"	"61"	"35.000"	"28.000"	"2.56021269151112E-05"	"26"	"0"	"6.835E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNMTPEEAER"	"[K].lNMTPEEAER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"709.85962"	"1418.71196"	"1418.71470"	"-1.93"	"-0.00137"	"6/98"	"6"	"98"	"435551.453063965"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"51.7234"	"16051"	"16051"	"16029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"41.8"	""	"48.5"	""	"58.5"	"1.6"	"77.9"	"67.5"	""	"622"	"27"	"34.000"	"27.000"	"0.0688272454687353"	"17"	"0.001162"	"0.009234"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.85968"	"1418.71208"	"1418.71470"	"-1.84"	"-0.00131"	"8/98"	"8"	"98"	"305761.927185059"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"57.1211"	"18209"	"18209"	"18184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"37.6"	""	"27.5"	""	"43.2"	"1.8"	"63.9"	"58.9"	""	"622"	"7"	"34.000"	"27.000"	"6.12012636098829"	"13"	"0.008868"	"0.1124"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"709.86023"	"1418.71318"	"1418.71470"	"-1.07"	"-0.00076"	"8/98"	"8"	"98"	"395844.161621094"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"57.0237"	"18204"	"18204"	"18182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"31.6"	""	"35.3"	""	"41.9"	""	"61.3"	"52.8"	""	"624"	"19"	"34.000"	"27.000"	"0.366568037141133"	"18"	"0.007104"	"0.09089"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.86029"	"1418.71330"	"1418.71470"	"-0.98"	"-0.00070"	"8/98"	"8"	"98"	"298118.752624512"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"57.4542"	"18344"	"18344"	"18314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.1"	""	"29.8"	""	"35.2"	""	"43.7"	""	"54.2"	"52.1"	""	"623"	"11"	"34.000"	"27.000"	"2.37387611622916"	"13"	"0.008718"	"0.1108"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNMTPEEAER"	"[K].lNMTPEEAER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"709.86090"	"1418.71453"	"1418.71470"	"-0.12"	"-0.00009"	"12/98"	"12"	"98"	"371350.901245117"	"HCD"	"MS2"	"17.70731"	"31.5"	"100.000"	"51.9175"	"16096"	"16096"	"16069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.3"	""	"32.1"	""	"40.1"	""	"48.3"	""	"62.1"	"70.5"	""	"653"	"33"	"35.000"	"28.000"	"0.0180668810658938"	"20"	"0.0001991"	"0.005006"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPLAQMEEER"	"[K].sPLAQMEEER.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.86102"	"1418.71477"	"1418.71470"	"0.05"	"0.00004"	"9/98"	"9"	"98"	"353729.159362793"	"HCD"	"MS2"	"32.37581"	"26.0"	"100.000"	"57.3893"	"18353"	"18353"	"18325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.1"	""	"33.8"	""	"32.3"	""	"35.6"	""	"54.6"	"54.7"	""	"652"	"21"	"35.000"	"28.000"	"0.258355433736634"	"14"	"0.001872"	"0.01543"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFAETHIK"	"[K].dFAETHIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"473.60574"	"1418.80268"	"1418.80439"	"-1.20"	"-0.00057"	"7/64"	"7"	"64"	"2608039.92218018"	"HCD"	"MS2"	"55.9244"	"130.6"	"100.000"	"48.6876"	"14786"	"14786"	"14756"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.4"	"3.0"	"165.3"	""	"176.3"	""	"228.3"	""	"253.3"	"245.6"	""	"1020"	"17"	"37.000"	"30.000"	"1.07540035646598"	"16"	"0.001951"	"0.01729"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIDEHATK"	"[K].fIDEHATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"473.60574"	"1418.80268"	"1418.80439"	"-1.20"	"-0.00057"	"10/64"	"10"	"64"	"8867936.14300537"	"HCD"	"MS2"	"44.01424"	"399.8"	"100.000"	"44.5492"	"13109"	"13109"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"537.7"	""	"471.9"	""	"461.3"	""	"729.4"	""	"801.9"	"794.5"	""	"1020"	"33"	"37.000"	"30.000"	"0.0262766608736696"	"21"	"0.0001991"	"0.002306"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTGEFEK"	"[R].hLTGEFEk.[EK]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"473.60590"	"1418.80313"	"1418.80439"	"-0.88"	"-0.00042"	"11/64"	"11"	"64"	"9728367.20300293"	"HCD"	"MS2"	"20.35479"	"335.5"	"98.607"	"45.4275"	"13500"	"13500"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"509.9"	""	"390.2"	""	"434.5"	""	"586.7"	""	"642.4"	"618.7"	""	"1016"	"42"	"37.000"	"30.000"	"0.00322005813318519"	"20"	"0.0001991"	"0.002281"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIDEHATK"	"[K].fIDEHATk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"473.60608"	"1418.80368"	"1418.80439"	"-0.49"	"-0.00023"	"9/64"	"9"	"64"	"9655540.14343262"	"HCD"	"MS2"	"53.52302"	"415.2"	"100.000"	"44.3432"	"13061"	"13061"	"13045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"559.1"	""	"503.6"	""	"462.5"	""	"747.9"	""	"811.8"	"855.9"	""	"1014"	"27"	"37.000"	"30.000"	"0.10617150151164"	"19"	"0.0004582"	"0.006486"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLTGEFEK"	"[R].hLTGEFEk.[EK]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"Q8K586; P62828"	"GTP-binding nuclear protein Ran, testis-specific isoform OS=Rattus norvegicus OX=10116 GN=Rasl2-9 PE=2 SV=1; GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"473.60620"	"1418.80405"	"1418.80439"	"-0.24"	"-0.00011"	"10/64"	"10"	"64"	"8747630.1953125"	"HCD"	"MS2"	"31.25177"	"322.2"	"100.000"	"45.6631"	"13562"	"13562"	"13541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"472.8"	""	"394.4"	""	"415.3"	""	"584.0"	""	"612.9"	"575.7"	""	"1008"	"38"	"37.000"	"30.000"	"0.00728501644455947"	"22"	"0.0001686"	"0.001272"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFAETHIK"	"[K].dFAETHIk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"Q5SGE0"	"Leucine-rich PPR motif-containing protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Lrpprc PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"473.60742"	"1418.80771"	"1418.80439"	"2.34"	"0.00111"	"6/64"	"6"	"64"	"3132303.18395996"	"HCD"	"MS2"	"57.92311"	"153.9"	"100.000"	"48.4150"	"14711"	"14711"	"14686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.2"	""	"188.5"	""	"197.5"	""	"278.7"	"1.3"	"309.6"	"290.8"	""	"1001"	"23"	"36.000"	"30.000"	"0.276314758360019"	"18"	"0.0001991"	"0.003689"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAAAGSDEK"	"[K].vIAAAGSDEk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNC9"	"Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"B0BNC9"	"Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"709.91534"	"1418.82341"	"1418.82552"	"-1.48"	"-0.00105"	"7/76"	"7"	"76"	"414380.321289063"	"HCD"	"MS2"	"59.60146"	"32.0"	"100.000"	"47.2642"	"14206"	"14206"	"14186"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"46.3"	""	"54.2"	""	"43.1"	""	"56.3"	"64.4"	""	"937"	"38"	"36.000"	"29.000"	"0.00680314292839857"	"23"	"0"	"0.0002356"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIAAAGSDEK"	"[K].vIAAAGSDEk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNC9"	"Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"B0BNC9"	"Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"709.91693"	"1418.82659"	"1418.82552"	"0.75"	"0.00054"	"7/76"	"7"	"76"	"422433.726196289"	"HCD"	"MS2"	"60.03541"	"34.2"	"100.000"	"46.9029"	"14097"	"14097"	"14075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"57.4"	""	"49.1"	""	"46.6"	""	"53.3"	"64.2"	""	"899"	"41"	"36.000"	"29.000"	"0.00380828722656198"	"27"	"0.0001991"	"0.002586"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEK"	"[R].eLLTLDEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"709.92822"	"1418.84917"	"1418.85067"	"-1.06"	"-0.00075"	"14/68"	"14"	"68"	"550698.331665039"	"HCD"	"MS2"	"39.87407"	"47.1"	"100.000"	"94.8777"	"33523"	"33523"	"33507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"56.2"	""	"58.9"	""	"83.6"	"1.6"	"102.0"	"96.3"	""	"784"	"47"	"35.000"	"28.000"	"0.000736692192186881"	"28"	"0"	"0.0001011"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEK"	"[R].eLLTLDEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"709.92834"	"1418.84941"	"1418.85067"	"-0.88"	"-0.00063"	"7/68"	"7"	"68"	"316556.87298584"	"HCD"	"MS2"	"35.49045"	"24.5"	"100.000"	"95.1734"	"33643"	"33643"	"33623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"25.3"	""	"27.2"	""	"35.9"	"0.1"	"58.6"	"61.9"	""	"784"	"37"	"35.000"	"28.000"	"0.00759077409867069"	""	"0.0001686"	"0.001248"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEK"	"[R].eLLTLDEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"709.92865"	"1418.85002"	"1418.85067"	"-0.45"	"-0.00032"	"7/68"	"7"	"68"	"738788.870117188"	"HCD"	"MS2"	"38.47828"	"59.6"	"100.000"	"94.9132"	"33504"	"33504"	"33490"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.7"	""	"57.9"	""	"78.6"	""	"100.8"	""	"150.8"	"116.3"	""	"785"	"42"	"35.000"	"28.000"	"0.00248793861668344"	"26"	"9.9E-05"	"0.0004214"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEK"	"[R].eLLTLDEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"709.92938"	"1418.85149"	"1418.85067"	"0.58"	"0.00041"	"7/68"	"7"	"68"	"256133.825683594"	"HCD"	"MS2"	"45.81942"	"20.5"	"100.000"	"95.2195"	"33629"	"33629"	"33607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.9"	""	"25.4"	""	"24.8"	""	"31.3"	""	"51.6"	"38.2"	""	"787"	"37"	"35.000"	"28.000"	"0.0071440541330123"	""	"0.001103"	"0.009097"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMSAPGTR"	"[K].gASQAGMSAPGTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"710.36377"	"1419.72026"	"1419.72118"	"-0.64"	"-0.00046"	"6/132"	"6"	"132"	"117348.620422363"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"27.8783"	"6366"	"6366"	"6349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.5"	""	"6.5"	""	"7.8"	""	"15.3"	""	"19.1"	"18.4"	""	"678"	"34"	"35.000"	"28.000"	"0.0135581270169012"	"19"	"0"	"0.0002587"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMSAPGTR"	"[K].gASQAGMSAPGTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.36389"	"1419.72051"	"1419.72118"	"-0.47"	"-0.00034"	"4/132"	"4"	"132"	"116928.123779297"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"27.6319"	"6307"	"6307"	"6284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.1"	""	"8.4"	""	"6.8"	""	"13.6"	""	"12.3"	"13.2"	""	"678"	"8"	"35.000"	"28.000"	"5.74380514351644"	"13"	"0.003317"	"0.03599"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"473.93753"	"1419.79804"	"1419.79963"	"-1.12"	"-0.00053"	"8/76"	"8"	"76"	"12871095.7531128"	"HCD"	"MS2"	"7.066851"	"452.1"	"100.000"	"28.4831"	"6650"	"6650"	"6639"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"459.4"	""	"477.3"	""	"412.9"	""	"833.1"	""	"1034.9"	"1090.1"	""	"1060"	"24"	"37.000"	"30.000"	"0.231353391087288"	""	"0.002189"	"0.02029"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"710.40308"	"1419.79888"	"1419.79963"	"-0.53"	"-0.00038"	"11/76"	"11"	"76"	"281349.456359863"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"28.5198"	"6665"	"6665"	"6647"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"29.2"	""	"24.4"	""	"48.6"	"0.2"	"55.7"	"55.1"	""	"1095"	"18"	"37.000"	"30.000"	"0.828674783518824"	"23"	"0.006384"	"0.07962"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHASNIYK"	"[R].eHASNIYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"Q9QZA6"	"CD151 antigen OS=Rattus norvegicus OX=10116 GN=Cd151 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"473.93784"	"1419.79895"	"1419.79963"	"-0.48"	"-0.00023"	"10/68"	"10"	"68"	"6867667.81402588"	"HCD"	"MS2"	"5.969361"	"261.3"	"100.000"	"28.6609"	"6679"	"6679"	"6663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.9"	""	"300.4"	""	"275.0"	""	"445.9"	"8.2"	"583.7"	"573.4"	""	"1095"	"33"	"37.000"	"30.000"	"0.0280791607735272"	"20"	"0.0001991"	"0.002033"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6829"	"0.0000"	"1"	"1"	"1"	"473.93787"	"1419.79905"	"1419.79963"	"-0.42"	"-0.00020"	"6/76"	"6"	"76"	"40159125.2333984"	"HCD"	"MS2"	"6.111419"	"429.3"	"26.377"	"28.7702"	"6765"	"6765"	"6748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"371.9"	""	"379.7"	""	"331.6"	""	"760.5"	""	"1064.6"	"1197.6"	""	"1093"	"41"	"37.000"	"30.000"	"0.00451429739443928"	"28"	"9.9E-05"	"0.0008517"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"710.40363"	"1419.79997"	"1419.79963"	"0.24"	"0.00017"	"7/76"	"7"	"76"	"212037.784118652"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"28.8231"	"6786"	"6786"	"6764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"14.2"	""	"13.5"	""	"31.8"	""	"55.6"	"45.1"	""	"1075"	"35"	"37.000"	"30.000"	"0.0157535511932205"	"25"	"0"	"0.000397"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"473.93820"	"1419.80005"	"1419.79963"	"0.29"	"0.00014"	"10/76"	"10"	"76"	"65356435.8374023"	"HCD"	"MS2"	"5.300328"	"518.7"	"20.254"	"28.9524"	"6797"	"6797"	"6779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"446.7"	""	"449.4"	""	"383.1"	""	"921.4"	""	"1311.5"	"1444.4"	""	"1075"	"36"	"37.000"	"30.000"	"0.0130730965487718"	"26"	"0.0001686"	"0.001496"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVYDAHTK"	"[K].qVYDAHTk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"710.40387"	"1419.80046"	"1419.79963"	"0.58"	"0.00041"	"12/76"	"12"	"76"	"716084.967041016"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"28.8559"	"6758"	"6758"	"6734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"52.8"	""	"45.5"	""	"106.6"	""	"149.7"	"164.2"	""	"1075"	"36"	"37.000"	"30.000"	"0.012571250157794"	"30"	"9.9E-05"	"0.0008432"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"710.40729"	"1419.80730"	"1419.80953"	"-1.57"	"-0.00112"	"7/78"	"7"	"78"	"1968862.0201416"	"HCD"	"MS2"	"0"	"138.4"	"100.000"	"40.9981"	"11701"	"11701"	"11689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.0"	""	"180.1"	""	"171.4"	""	"243.0"	""	"297.8"	"288.0"	""	"1037"	"43"	"37.000"	"30.000"	"0.00284936943095178"	"26"	"0"	"0.0001291"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"710.40729"	"1419.80730"	"1419.80953"	"-1.57"	"-0.00112"	"14/78"	"14"	"78"	"1848384.8560791"	"HCD"	"MS2"	"0"	"125.9"	"100.000"	"41.1372"	"11723"	"11723"	"11712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.6"	""	"151.5"	""	"153.3"	""	"224.4"	""	"261.8"	"277.8"	""	"1037"	"48"	"37.000"	"30.000"	"0.000846737434983213"	"27"	"0"	"7.056E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"710.40759"	"1419.80791"	"1419.80953"	"-1.14"	"-0.00081"	"8/78"	"8"	"78"	"1024686.44140625"	"HCD"	"MS2"	"26.151"	"87.1"	"100.000"	"71.7434"	"24147"	"24147"	"24132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.4"	""	"85.3"	""	"114.3"	""	"140.9"	""	"179.2"	"186.7"	""	"1024"	"43"	"37.000"	"30.000"	"0.00249040489314028"	"25"	"0"	"4.89E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"710.40784"	"1419.80840"	"1419.80953"	"-0.80"	"-0.00057"	"7/78"	"7"	"78"	"1408121.08190918"	"HCD"	"MS2"	"0"	"105.9"	"100.000"	"40.7271"	"11592"	"11592"	"11563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.1"	""	"137.4"	""	"124.0"	""	"215.5"	""	"217.8"	"199.1"	""	"1024"	"45"	"37.000"	"30.000"	"0.00177120961446974"	"28"	"0"	"6.252E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIASEPTEK"	"[K].sIASEPTEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"710.40790"	"1419.80852"	"1419.80953"	"-0.71"	"-0.00051"	"8/78"	"8"	"78"	"1362029.12567139"	"HCD"	"MS2"	"0"	"106.3"	"100.000"	"40.8501"	"11607"	"11607"	"11580"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.5"	""	"141.8"	""	"129.0"	""	"192.6"	"1.2"	"218.7"	"213.2"	""	"1035"	"46"	"37.000"	"30.000"	"0.00129990122830621"	"27"	"0"	"4.383E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"710.40833"	"1419.80937"	"1419.80953"	"-0.11"	"-0.00008"	"14/78"	"14"	"78"	"1709444.00683594"	"HCD"	"MS2"	"11.77913"	"127.6"	"100.000"	"71.5083"	"24082"	"24082"	"24064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.5"	""	"144.6"	""	"145.9"	""	"225.5"	"0.6"	"251.1"	"257.0"	""	"1030"	"52"	"37.000"	"30.000"	"0.000345785859256866"	"25"	"0"	"3.858E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"710.40857"	"1419.80986"	"1419.80953"	"0.23"	"0.00017"	"13/78"	"13"	"78"	"1208928.76702881"	"HCD"	"MS2"	"28.4937"	"100.6"	"100.000"	"71.8054"	"24204"	"24204"	"24187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.8"	""	"109.2"	""	"116.2"	""	"160.7"	""	"211.0"	"211.6"	""	"1036"	"43"	"37.000"	"30.000"	"0.00253121922139588"	"29"	"0"	"0.00011"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDGLDVSK"	"[K].eVDGLDVSk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"710.40863"	"1419.80998"	"1419.80953"	"0.32"	"0.00023"	"16/78"	"16"	"78"	"1764040.79943848"	"HCD"	"MS2"	"16.44825"	"135.0"	"100.000"	"71.4097"	"24011"	"24011"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.6"	""	"156.8"	""	"157.7"	""	"245.7"	"0.0"	"275.5"	"259.1"	""	"1029"	"61"	"37.000"	"30.000"	"3.84047886201979E-05"	"28"	"0"	"3.441E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTIATIEK"	"[K].aDTIATIEk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2GUZ1"	"Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus OX=10116 GN=Usp4 PE=1 SV=1"	"B2GUZ1"	"Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus OX=10116 GN=Usp4 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"710.42786"	"1419.84844"	"1419.84592"	"1.77"	"0.00126"	"7/76"	"7"	"76"	"482005.618286133"	"HCD"	"MS2"	"53.55532"	"46.4"	"100.000"	"72.0312"	"24291"	"24291"	"24266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.7"	""	"54.3"	""	"60.6"	""	"74.4"	""	"83.4"	"106.4"	""	"754"	"18"	"35.000"	"28.000"	"0.611422406704317"	"24"	"0.0001991"	"0.004317"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSQVVAGTK"	"[K].aTSQVVAGTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8554"	"0.0000"	"1"	"1"	"1"	"710.43158"	"1419.85588"	"1419.85715"	"-0.89"	"-0.00063"	"18/98"	"18"	"98"	"3428909.73596191"	"HCD"	"MS2"	"3.793023"	"219.0"	"100.000"	"38.5946"	"10729"	"10729"	"10708"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"352.4"	""	"356.3"	""	"142.6"	""	"436.9"	"2.0"	"441.9"	"343.7"	""	"646"	"83"	"35.000"	"28.000"	"1.53533277979526E-07"	""	"0"	"4.417E-07"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSQVVAGTK"	"[K].aTSQVVAGTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8675"	"0.0000"	"1"	"1"	"1"	"710.43243"	"1419.85759"	"1419.85715"	"0.31"	"0.00022"	"18/98"	"18"	"98"	"3152710.70977783"	"HCD"	"MS2"	"0"	"213.3"	"100.000"	"38.6706"	"10724"	"10724"	"10702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.6"	""	"349.3"	""	"151.2"	""	"405.5"	"3.3"	"443.4"	"323.6"	""	"631"	"83"	"34.000"	"28.000"	"1.57398055793634E-07"	"28"	"0"	"2.171E-06"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVTGDNINTAR"	"[R].mVTGDNINTAR.[A]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"710.87378"	"1420.74028"	"1420.74158"	"-0.91"	"-0.00065"	"10/102"	"10"	"102"	"816103.120178223"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"42.7363"	"12370"	"12370"	"12346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.9"	""	"66.3"	""	"67.2"	""	"88.1"	""	"117.1"	"110.5"	""	"798"	"42"	"36.000"	"29.000"	"0.0028052585563365"	""	"0"	"2.18E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVTGDNINTAR"	"[R].mVTGDNINTAR.[A]"	"N-Term(TMT6plex)"	"1"	"3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11506; Q64568; P11505"	"Plasma membrane calcium-transporting ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2b2 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2b3 PE=1 SV=2; Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"710.87469"	"1420.74211"	"1420.74158"	"0.38"	"0.00027"	"13/102"	"13"	"102"	"800239.56060791"	"HCD"	"MS2"	"17.15467"	"57.8"	"100.000"	"42.5822"	"12341"	"12341"	"12319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.1"	""	"70.8"	""	"76.3"	""	"95.6"	"0.6"	"119.9"	"115.3"	""	"801"	"44"	"36.000"	"29.000"	"0.00168889449623147"	"23"	"0"	"4.479E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"474.25885"	"1420.76200"	"1420.76336"	"-0.96"	"-0.00045"	"13/92"	"13"	"92"	"1479795.99517822"	"HCD"	"MS2"	"52.0022"	"36.2"	"100.000"	"53.9253"	"16949"	"16949"	"16926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.5"	""	"39.6"	""	"43.9"	""	"68.1"	""	"70.1"	"76.3"	""	"916"	"60"	"36.000"	"29.000"	"4.97582935616616E-05"	"24"	"0"	"2.045E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"710.88477"	"1420.76225"	"1420.76336"	"-0.78"	"-0.00055"	"7/92"	"7"	"92"	"581537.94329834"	"HCD"	"MS2"	"0"	"38.5"	"100.000"	"54.7786"	"17263"	"17263"	"17241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"39.8"	""	"49.4"	""	"69.6"	"1.6"	"71.3"	"80.5"	""	"927"	"34"	"36.000"	"29.000"	"0.0203258978418706"	"22"	"9.9E-05"	"0.0007997"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"710.88477"	"1420.76225"	"1420.76336"	"-0.78"	"-0.00055"	"10/92"	"10"	"92"	"5502371.12854004"	"HCD"	"MS2"	"0"	"212.8"	"100.000"	"54.1713"	"17049"	"17049"	"17031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.2"	""	"241.8"	""	"288.6"	""	"359.8"	"3.8"	"435.2"	"411.0"	""	"927"	"45"	"36.000"	"29.000"	"0.00154187702951771"	"28"	"0"	"5.357E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"710.88501"	"1420.76274"	"1420.76336"	"-0.43"	"-0.00031"	"7/92"	"7"	"92"	"2800497.52624512"	"HCD"	"MS2"	"11.39728"	"120.8"	"100.000"	"54.1968"	"17026"	"17026"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.9"	""	"145.6"	""	"141.0"	""	"236.6"	""	"230.1"	"228.7"	""	"920"	"43"	"36.000"	"29.000"	"0.00243084815816583"	"27"	"0"	"6.016E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"710.88501"	"1420.76274"	"1420.76336"	"-0.43"	"-0.00031"	"10/92"	"10"	"92"	"3399237.71582031"	"HCD"	"MS2"	"0"	"150.0"	"100.000"	"53.8862"	"16933"	"16933"	"16910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.5"	""	"168.2"	""	"198.4"	""	"267.6"	"0.8"	"300.6"	"288.4"	""	"920"	"44"	"36.000"	"29.000"	"0.00176912219740863"	"25"	"0"	"5.797E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"474.25912"	"1420.76282"	"1420.76336"	"-0.38"	"-0.00018"	"12/92"	"12"	"92"	"2122038.90216064"	"HCD"	"MS2"	"45.69241"	"85.9"	"100.000"	"54.2358"	"17076"	"17076"	"17047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.4"	""	"115.5"	""	"117.8"	""	"141.8"	""	"161.8"	"166.6"	""	"918"	"31"	"36.000"	"29.000"	"0.0379151418855925"	"21"	"0.0001686"	"0.00117"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8393"	"0.0000"	"1"	"1"	"1"	"474.25922"	"1420.76310"	"1420.76336"	"-0.19"	"-0.00009"	"14/92"	"14"	"92"	"2086314.07598877"	"HCD"	"MS2"	"58.4095"	"49.7"	"100.000"	"54.3486"	"17088"	"17088"	"17069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"56.2"	""	"66.4"	""	"91.9"	""	"100.0"	"95.9"	""	"918"	"56"	"36.000"	"29.000"	"0.000103469579837796"	"25"	"0"	"3.17E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPEYEAAATR"	"[R].lAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"710.88525"	"1420.76323"	"1420.76336"	"-0.09"	"-0.00006"	"9/92"	"9"	"92"	"5989641.42181396"	"HCD"	"MS2"	"0"	"129.7"	"100.000"	"54.4865"	"17144"	"17144"	"17127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.6"	""	"149.9"	""	"170.6"	""	"223.5"	"2.0"	"251.3"	"262.6"	""	"918"	"47"	"36.000"	"29.000"	"0.00097009146928502"	"28"	"0"	"1.485E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLISMEEINR"	"[R].sLISMEEINR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"710.88617"	"1420.76506"	"1420.76673"	"-1.17"	"-0.00083"	"7/86"	"7"	"86"	"238864.837280273"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"87.5536"	"30572"	"30572"	"30554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"21.5"	""	"24.2"	""	"17.1"	""	"28.9"	"34.3"	""	"953"	"29"	"36.000"	"29.000"	"0.0631048741520258"	"18"	"9.9E-05"	"0.0007993"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSAEINEIIR"	"[K].mSAEINEIIR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"710.88647"	"1420.76567"	"1420.76673"	"-0.75"	"-0.00053"	"9/90"	"9"	"90"	"676641.668823242"	"HCD"	"MS2"	"4.915489"	"38.2"	"100.000"	"68.6247"	"22880"	"22880"	"22860"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.7"	""	"41.3"	""	"45.0"	""	"62.8"	""	"78.9"	"89.1"	""	"947"	"27"	"36.000"	"29.000"	"0.0867600878992768"	"14"	"0.004213"	"0.04688"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLISMEEINR"	"[R].sLISMEEINR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"710.88666"	"1420.76604"	"1420.76673"	"-0.49"	"-0.00035"	"8/86"	"8"	"86"	"291429.988220215"	"HCD"	"MS2"	"21.08421"	"18.2"	"100.000"	"87.2515"	"30450"	"30450"	"30429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.3"	""	"25.2"	""	"23.9"	""	"26.1"	""	"34.5"	"38.0"	""	"947"	"34"	"36.000"	"29.000"	"0.0191566684718739"	"18"	"9.9E-05"	"0.0009426"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLISMEEINR"	"[R].sLISMEEINR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"710.88672"	"1420.76616"	"1420.76673"	"-0.40"	"-0.00028"	"7/86"	"7"	"86"	"292936.794250488"	"HCD"	"MS2"	"30.95332"	"21.2"	"100.000"	"87.3767"	"30466"	"30466"	"30445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"26.3"	""	"28.6"	""	"32.1"	"0.5"	"43.6"	"43.2"	""	"943"	"28"	"36.000"	"29.000"	"0.0718590873415423"	"23"	"0"	"0.0003988"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLISMEEINR"	"[R].sLISMEEINR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"Q9JHB5"	"Translin-associated protein X OS=Rattus norvegicus OX=10116 GN=Tsnax PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"710.88739"	"1420.76750"	"1420.76673"	"0.54"	"0.00039"	"6/86"	"6"	"86"	"190957.930419922"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"87.7020"	"30597"	"30597"	"30572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.6"	""	"16.2"	""	"18.6"	""	"17.2"	""	"22.6"	"23.4"	""	"941"	"12"	"36.000"	"29.000"	"3.24010905429982"	"17"	"0.004959"	"0.06167"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDAESWK"	"[K].qVDAESWk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"710.89532"	"1420.78337"	"1420.78365"	"-0.20"	"-0.00014"	"7/76"	"7"	"76"	"565723.427978516"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"64.1244"	"21087"	"21087"	"21072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.7"	""	"70.4"	""	"74.6"	""	"83.4"	"0.4"	"114.3"	"116.4"	""	"1024"	"43"	"37.000"	"30.000"	"0.00260777405981284"	"25"	"0.0001686"	"0.001228"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAGHPLAQNER"	"[K].vAGHPLAQNER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"Q5U211"	"Sorting nexin-3 OS=Rattus norvegicus OX=10116 GN=Snx3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"710.89600"	"1420.78472"	"1420.78583"	"-0.78"	"-0.00056"	"5/86"	"5"	"86"	"210691.559448242"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"23.9057"	"4789"	"4789"	"4759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"12.3"	""	"15.3"	""	"15.4"	""	"14.9"	"13.6"	""	"1019"	"18"	"37.000"	"30.000"	"0.843614796387726"	"20"	"0.001261"	"0.009853"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDAESWK"	"[K].qVDAESWk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"710.89697"	"1420.78667"	"1420.78365"	"2.12"	"0.00151"	"11/76"	"11"	"76"	"559120.713806152"	"HCD"	"MS2"	"0"	"64.0"	"100.000"	"64.1581"	"21067"	"21067"	"21060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.9"	""	"78.9"	""	"79.4"	""	"97.0"	""	"121.0"	"129.4"	""	"1026"	"36"	"37.000"	"30.000"	"0.0129752987217687"	""	"0.0001686"	"0.001527"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"710.89996"	"1420.79265"	"1420.79355"	"-0.63"	"-0.00045"	"7/68"	"7"	"68"	"6441990.02246094"	"HCD"	"MS2"	"0"	"490.5"	"100.000"	"69.6606"	"23300"	"23300"	"23283"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"722.4"	""	"489.8"	""	"565.8"	""	"900.4"	""	"997.5"	"981.9"	""	"1040"	"42"	"37.000"	"30.000"	"0.00331133670872116"	""	"0.0001991"	"0.002296"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"710.90021"	"1420.79314"	"1420.79355"	"-0.29"	"-0.00020"	"12/68"	"12"	"68"	"2229849.04406738"	"HCD"	"MS2"	"2.268117"	"189.2"	"100.000"	"70.0614"	"23498"	"23498"	"23481"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"262.7"	""	"193.0"	""	"209.5"	""	"342.7"	""	"383.0"	"412.5"	""	"1036"	"35"	"37.000"	"30.000"	"0.0180023731627581"	"27"	"0.0001991"	"0.003173"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"710.90027"	"1420.79326"	"1420.79355"	"-0.20"	"-0.00014"	"7/68"	"7"	"68"	"6406510.41351318"	"HCD"	"MS2"	"0"	"505.9"	"100.000"	"69.7592"	"23374"	"23374"	"23356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"746.7"	""	"522.9"	""	"576.9"	""	"949.6"	""	"1021.8"	"991.7"	""	"1036"	"44"	"37.000"	"30.000"	"0.00225595150569125"	""	"0.0001991"	"0.00358"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"710.90082"	"1420.79436"	"1420.79355"	"0.57"	"0.00041"	"7/68"	"7"	"68"	"1014691.43225098"	"HCD"	"MS2"	"0"	"95.7"	"100.000"	"69.3568"	"23177"	"23177"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.9"	""	"106.1"	""	"118.4"	""	"179.8"	""	"184.8"	"179.5"	""	"1054"	"41"	"37.000"	"30.000"	"0.00400691947947476"	"30"	"0.0001686"	"0.001184"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"710.90112"	"1420.79497"	"1420.79355"	"1.00"	"0.00071"	"7/68"	"7"	"68"	"1414618.78863525"	"HCD"	"MS2"	"11.27104"	"124.0"	"100.000"	"69.4642"	"23255"	"23255"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.0"	""	"149.2"	""	"125.4"	""	"264.1"	""	"231.4"	"216.2"	""	"1057"	"41"	"37.000"	"30.000"	"0.00378481792297519"	"27"	"0.0001686"	"0.001802"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYEHAPK"	"[R].aFYEHAPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"474.26990"	"1420.79514"	"1420.79891"	"-2.65"	"-0.00126"	"7/56"	"7"	"56"	"3599754.27355957"	"HCD"	"MS2"	"9.835333"	"137.0"	"100.000"	"42.5477"	"12293"	"12293"	"12270"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"249.7"	""	"187.7"	""	"152.5"	""	"253.2"	""	"234.1"	"221.9"	""	"1002"	"19"	"36.000"	"30.000"	"0.587269878139613"	"19"	"0.004213"	"0.04557"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIDDLEEK"	"[K].tIDDLEEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"710.90125"	"1420.79521"	"1420.79355"	"1.17"	"0.00083"	"7/68"	"7"	"68"	"1095929.22473145"	"HCD"	"MS2"	"6.973593"	"95.6"	"100.000"	"70.0688"	"23466"	"23466"	"23448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.8"	""	"100.6"	""	"103.0"	""	"164.7"	""	"202.4"	"193.8"	""	"1002"	"41"	"36.000"	"30.000"	"0.00433348927306622"	"30"	"0.0001686"	"0.001949"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFYEHAPK"	"[R].aFYEHAPk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"474.27032"	"1420.79642"	"1420.79891"	"-1.75"	"-0.00083"	"6/56"	"6"	"56"	"5377334.12908936"	"HCD"	"MS2"	"7.105571"	"180.8"	"100.000"	"42.3612"	"12251"	"12251"	"12226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"338.0"	""	"238.1"	""	"199.1"	""	"321.4"	""	"296.4"	"316.8"	""	"1001"	"31"	"36.000"	"30.000"	"0.036425379217068"	"21"	"0.0001991"	"0.005189"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPAVVAYSER"	"[R].vTPAVVAYSER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"Q6AYB4"	"Heat shock 70 kDa protein 14 OS=Rattus norvegicus OX=10116 GN=Hspa14 PE=2 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"710.90338"	"1420.79949"	"1420.79975"	"-0.18"	"-0.00013"	"6/96"	"6"	"96"	"295249.334533691"	"HCD"	"MS2"	"19.08665"	"22.8"	"100.000"	"65.6005"	"21688"	"21688"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.6"	""	"33.3"	""	"33.4"	""	"31.1"	""	"47.3"	"43.7"	""	"1017"	"39"	"37.000"	"30.000"	"0.00596061343381224"	"22"	"0.0005161"	"0.006648"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"710.90509"	"1420.80290"	"1420.80478"	"-1.32"	"-0.00094"	"9/82"	"9"	"82"	"1392266.73406982"	"HCD"	"MS2"	"0"	"110.5"	"100.000"	"38.3741"	"10603"	"10603"	"10582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.5"	""	"176.4"	""	"150.0"	""	"152.3"	"0.0"	"193.8"	"209.0"	""	"997"	"55"	"36.000"	"29.000"	"0.000144432577846911"	"21"	"0"	"7.808E-06"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGTAGSDEK"	"[K].vVGTAGSDEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"710.90558"	"1420.80388"	"1420.80478"	"-0.63"	"-0.00045"	"9/82"	"9"	"82"	"1815577.31140137"	"HCD"	"MS2"	"0"	"136.3"	"100.000"	"38.2936"	"10606"	"10606"	"10581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.5"	""	"204.6"	""	"197.0"	""	"194.7"	""	"247.9"	"250.2"	""	"972"	"48"	"36.000"	"29.000"	"0.00080470420224619"	"22"	"0"	"7.243E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"710.90564"	"1420.80400"	"1420.80478"	"-0.55"	"-0.00039"	"8/84"	"8"	"84"	"3590365.42004395"	"HCD"	"MS2"	"0"	"295.9"	"100.000"	"40.1332"	"11315"	"11315"	"11299"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"558.1"	""	"324.9"	""	"360.8"	""	"480.8"	""	"549.4"	"534.1"	""	"971"	"60"	"36.000"	"29.000"	"5.23828633642582E-05"	""	"0"	"0.0001881"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"710.90588"	"1420.80449"	"1420.80478"	"-0.20"	"-0.00014"	"8/84"	"8"	"84"	"2359027.89172363"	"HCD"	"MS2"	"0"	"190.6"	"100.000"	"40.1200"	"11344"	"11344"	"11325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"330.4"	""	"197.1"	""	"243.2"	""	"304.1"	""	"362.0"	"370.7"	""	"970"	"56"	"36.000"	"29.000"	"0.000125239619245778"	""	"0"	"7.954E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"710.90594"	"1420.80461"	"1420.80478"	"-0.12"	"-0.00008"	"14/84"	"14"	"84"	"983249.42956543"	"HCD"	"MS2"	"0"	"86.1"	"100.000"	"39.8483"	"11200"	"11200"	"11178"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.2"	""	"101.2"	""	"101.8"	""	"146.6"	"0.4"	"146.9"	"145.5"	""	"974"	"54"	"36.000"	"29.000"	"0.000214550218527691"	""	"0"	"7.093E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQTSDLEK"	"[K].aAQTSDLEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"710.90649"	"1420.80571"	"1420.80478"	"0.66"	"0.00047"	"16/84"	"16"	"84"	"1265088.753479"	"HCD"	"MS2"	"0"	"108.2"	"100.000"	"39.8053"	"11217"	"11217"	"11195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.7"	""	"122.0"	""	"136.1"	""	"165.9"	""	"198.3"	"185.1"	""	"976"	"61"	"36.000"	"29.000"	"4.31936417597447E-05"	""	"0"	"1.199E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETNYGIPQR"	"[R].dETNYGIPQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"711.36261"	"1421.71794"	"1421.72222"	"-3.01"	"-0.00214"	"7/88"	"7"	"88"	"464680.784851074"	"HCD"	"MS2"	"0"	"31.6"	"100.000"	"44.7876"	"13206"	"13206"	"13180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.2"	""	"30.6"	""	"44.4"	""	"56.8"	""	"54.0"	"58.6"	""	"721"	"40"	"35.000"	"28.000"	"0.00332586999489292"	"17"	"9.9E-05"	"0.000467"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETNYGIPQR"	"[R].dETNYGIPQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"711.36414"	"1421.72099"	"1421.72222"	"-0.86"	"-0.00061"	"11/88"	"11"	"88"	"492351.513000488"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"44.5587"	"13147"	"13147"	"13125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.6"	""	"39.2"	""	"37.6"	""	"61.0"	"0.1"	"59.9"	"59.7"	""	"722"	"34"	"35.000"	"28.000"	"0.0155420106387508"	"21"	"0"	"0.0002542"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNPGDFTLSVR"	"[K].sNPGDFTLSVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"711.38202"	"1421.75676"	"1421.75861"	"-1.30"	"-0.00092"	"10/114"	"10"	"114"	"961396.592468262"	"HCD"	"MS2"	"5.07797"	"40.4"	"100.000"	"75.8407"	"25808"	"25808"	"25787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.1"	""	"49.3"	""	"56.0"	""	"67.3"	"0.7"	"78.7"	"79.1"	""	"890"	"49"	"36.000"	"29.000"	"0.000553809002238267"	"23"	"0"	"6.613E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNPGDFTLSVR"	"[K].sNPGDFTLSVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"P41499"	"Tyrosine-protein phosphatase non-receptor type 11 OS=Rattus norvegicus OX=10116 GN=Ptpn11 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"711.38300"	"1421.75871"	"1421.75861"	"0.07"	"0.00005"	"8/114"	"8"	"114"	"514247.791137695"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"75.8419"	"25840"	"25840"	"25825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.9"	""	"42.5"	""	"36.5"	""	"46.9"	"0.1"	"53.6"	"53.8"	""	"922"	"42"	"36.000"	"29.000"	"0.00285562335610396"	"21"	"9.9E-05"	"0.0008102"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDIENMVK"	"[K].dDIENMVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"711.38904"	"1421.77080"	"1421.77104"	"-0.17"	"-0.00012"	"14/68"	"14"	"68"	"407507.865539551"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"77.8885"	"26635"	"26635"	"26613"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.2"	""	"46.7"	""	"42.8"	""	"57.1"	"2.0"	"86.5"	"93.6"	""	"955"	"45"	"36.000"	"29.000"	"0.00148584455096812"	""	"0"	"0.0003374"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDIENMVK"	"[K].dDIENMVk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"711.38953"	"1421.77178"	"1421.77104"	"0.52"	"0.00037"	"6/68"	"6"	"68"	"251768.620727539"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"77.7371"	"26600"	"26600"	"26584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.3"	""	"28.1"	""	"28.0"	""	"39.3"	""	"61.1"	"56.6"	""	"970"	"41"	"36.000"	"29.000"	"0.00367063954085172"	""	"9.9E-05"	"0.0006215"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"711.39532"	"1421.78337"	"1421.78629"	"-2.05"	"-0.00146"	"7/60"	"7"	"60"	"439318.152099609"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"43.2930"	"12632"	"12632"	"12603"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.2"	""	"40.5"	""	"51.0"	""	"66.5"	""	"68.1"	"56.6"	""	"929"	"30"	"36.000"	"29.000"	"0.0433496622720202"	"19"	"0.005549"	"0.07037"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"711.39594"	"1421.78459"	"1421.78629"	"-1.20"	"-0.00085"	"7/60"	"7"	"60"	"479615.176391602"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"43.4654"	"12668"	"12668"	"12640"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.4"	""	"39.9"	""	"48.3"	""	"65.6"	"0.4"	"68.5"	"72.1"	""	"904"	"29"	"36.000"	"29.000"	"0.056641981107352"	"20"	"0.0065"	"0.08031"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPTPPNYK"	"[R].mPTPPNYk.[V]"	"N-Term(TMT6plex); M1(Oxidation); K8(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"711.39832"	"1421.78935"	"1421.78629"	"2.15"	"0.00153"	"6/60"	"6"	"60"	"357227.261474609"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"44.3360"	"13023"	"13023"	"12993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"39.5"	""	"43.5"	""	"52.6"	""	"51.9"	"52.8"	""	"895"	"39"	"36.000"	"29.000"	"0.00577820624942056"	"20"	"0.00394"	"0.04347"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEANHGLLVAR"	"[R].lEANHGLLVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"474.61835"	"1421.84049"	"1421.84261"	"-1.49"	"-0.00071"	"13/94"	"13"	"94"	"2451836.28338623"	"HCD"	"MS2"	"38.57307"	"82.3"	"100.000"	"52.1042"	"16172"	"16172"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.1"	""	"122.2"	""	"119.5"	""	"118.2"	""	"148.2"	"164.3"	""	"709"	"25"	"35.000"	"28.000"	"0.112361166564892"	"20"	"0"	"0.000275"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEANHGLLVAR"	"[R].lEANHGLLVAR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"Q9Z1H9"	"Caveolae-associated protein 3 OS=Rattus norvegicus OX=10116 GN=Cavin3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"474.61850"	"1421.84095"	"1421.84261"	"-1.17"	"-0.00056"	"13/94"	"13"	"94"	"2674915.98156738"	"HCD"	"MS2"	"39.72061"	"85.7"	"100.000"	"51.7632"	"16067"	"16067"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.0"	""	"116.5"	""	"117.6"	""	"135.2"	""	"172.8"	"172.9"	""	"708"	"28"	"35.000"	"28.000"	"0.0539514674844241"	"21"	"0"	"0.0001739"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"711.87366"	"1422.74004"	"1422.74262"	"-1.82"	"-0.00129"	"8/94"	"8"	"94"	"601076.680541992"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"88.7788"	"31029"	"31029"	"31010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.6"	""	"50.6"	""	"49.9"	""	"52.8"	"0.7"	"67.4"	"65.5"	""	"827"	"59"	"36.000"	"29.000"	"5.7739831729663E-05"	"28"	"0"	"1.769E-06"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8472"	"0.0000"	"1"	"1"	"1"	"711.87390"	"1422.74053"	"1422.74262"	"-1.47"	"-0.00105"	"10/94"	"10"	"94"	"728473.690795898"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"88.7057"	"31039"	"31039"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.4"	""	"54.8"	""	"58.8"	""	"59.0"	"0.5"	"62.9"	"72.7"	""	"825"	"72"	"36.000"	"29.000"	"2.6694632899629E-06"	"28"	"0"	"9.758E-08"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8493"	"0.0000"	"1"	"1"	"1"	"711.87518"	"1422.74309"	"1422.74262"	"0.33"	"0.00023"	"16/94"	"16"	"94"	"1498807.50701904"	"HCD"	"MS2"	"2.067248"	"77.2"	"100.000"	"88.9944"	"31157"	"31157"	"31143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.8"	""	"113.4"	""	"112.8"	""	"111.9"	"0.9"	"125.5"	"139.7"	""	"868"	"73"	"36.000"	"29.000"	"2.35770643867716E-06"	"28"	"0"	"1.065E-06"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLADAEGDVFR"	"[K].tLADAEGDVFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"Q02253"	"Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh6a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8493"	"0.0000"	"1"	"1"	"1"	"711.87524"	"1422.74321"	"1422.74262"	"0.41"	"0.00029"	"16/94"	"16"	"94"	"1587616.88031006"	"HCD"	"MS2"	"0.9806989"	"79.1"	"100.000"	"89.0671"	"31147"	"31147"	"31130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.9"	""	"109.9"	""	"120.3"	""	"123.1"	"0.0"	"122.6"	"145.1"	""	"868"	"73"	"36.000"	"29.000"	"2.34687376158382E-06"	"28"	"0"	"4.415E-07"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGDMPFVVTR"	"[R].rGDmPFVVTR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"474.92874"	"1422.77167"	"1422.77249"	"-0.57"	"-0.00027"	"6/102"	"6"	"102"	"6793031.52398682"	"HCD"	"MS2"	"17.46309"	"181.8"	"100.000"	"36.0645"	"9667"	"9667"	"9646"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.5"	""	"226.3"	""	"245.0"	""	"342.1"	"8.1"	"411.3"	"309.9"	""	"916"	"42"	"36.000"	"29.000"	"0.00272185808645932"	"15"	"0.004213"	"0.04758"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNLYR"	"[K].aLELDSNLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7679"	"0.0000"	"1"	"1"	"1"	"711.89258"	"1422.77788"	"1422.77901"	"-0.79"	"-0.00057"	"8/84"	"8"	"84"	"1914821.21154785"	"HCD"	"MS2"	"1.189725"	"92.6"	"100.000"	"91.9855"	"32359"	"32359"	"32342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.4"	""	"127.3"	""	"121.0"	""	"170.5"	"0.4"	"179.3"	"172.5"	""	"919"	"56"	"36.000"	"29.000"	"0.000117026850106283"	"29"	"0"	"2.704E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNLYR"	"[K].aLELDSNLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"711.89282"	"1422.77837"	"1422.77901"	"-0.45"	"-0.00032"	"8/84"	"8"	"84"	"415994.116027832"	"HCD"	"MS2"	"5.30189"	"29.4"	"100.000"	"92.3086"	"32454"	"32454"	"32436"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"42.8"	""	"48.9"	""	"46.3"	""	"58.5"	"50.4"	""	"924"	"49"	"36.000"	"29.000"	"0.000521965712578833"	""	"0"	"3.355E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNLYR"	"[K].aLELDSNLYR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"711.89307"	"1422.77886"	"1422.77901"	"-0.11"	"-0.00008"	"8/84"	"8"	"84"	"1946132.16534424"	"HCD"	"MS2"	"0"	"96.7"	"100.000"	"92.0139"	"32335"	"32335"	"32318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.0"	""	"133.9"	""	"142.9"	""	"177.3"	"2.6"	"180.6"	"172.0"	""	"922"	"58"	"36.000"	"29.000"	"6.83440837252285E-05"	""	"0"	"4.733E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"474.93329"	"1422.78531"	"1422.78807"	"-1.94"	"-0.00092"	"7/64"	"7"	"64"	"549775.576721191"	"HCD"	"MS2"	"28.4006"	"29.2"	"100.000"	"80.4279"	"27668"	"27668"	"27644"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"33.5"	""	"34.6"	""	"50.4"	""	"60.8"	"60.8"	""	"900"	"23"	"36.000"	"29.000"	"0.245026193779089"	"23"	"0.0008247"	"0.007582"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"474.93372"	"1422.78659"	"1422.78807"	"-1.04"	"-0.00049"	"7/64"	"7"	"64"	"472201.709289551"	"HCD"	"MS2"	"25.57034"	"27.4"	"100.000"	"80.9557"	"27910"	"27910"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.8"	""	"29.5"	""	"39.5"	""	"48.5"	"0.1"	"57.3"	"59.3"	""	"892"	"22"	"36.000"	"29.000"	"0.252542722911061"	"18"	"0.001951"	"0.01643"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"474.93372"	"1422.78659"	"1422.78807"	"-1.04"	"-0.00049"	"7/64"	"7"	"64"	"828239.876586914"	"HCD"	"MS2"	"23.84479"	"38.4"	"100.000"	"80.6513"	"27786"	"27786"	"27764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.4"	""	"51.6"	""	"47.7"	""	"68.0"	""	"75.5"	"74.8"	""	"892"	"21"	"36.000"	"29.000"	"0.396583698564645"	"20"	"0.0004582"	"0.006439"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"711.89703"	"1422.78679"	"1422.78807"	"-0.90"	"-0.00064"	"12/64"	"12"	"64"	"461643.264099121"	"HCD"	"MS2"	"0"	"46.6"	"100.000"	"80.4602"	"27681"	"27681"	"27660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.6"	""	"54.1"	""	"61.8"	""	"82.6"	""	"93.7"	"99.2"	""	"892"	"24"	"36.000"	"29.000"	"0.158977205508105"	"25"	"0.002875"	"0.03095"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"3"	"3"	"0.5357"	"0.0000"	"1"	"1"	"1"	"474.93390"	"1422.78714"	"1422.78807"	"-0.65"	"-0.00031"	"6/64"	"6"	"64"	"609581.289001465"	"HCD"	"MS2"	"12.84779"	"31.0"	"100.000"	"80.7737"	"27809"	"27809"	"27782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.7"	""	"35.1"	""	"44.8"	""	"56.7"	""	"64.6"	"61.3"	""	"941"	"28"	"36.000"	"29.000"	"0.067074837278983"	"28"	"0.0001686"	"0.001711"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFDDLPK"	"[K].eTFDDLPk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"P35284"	"Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"711.89771"	"1422.78813"	"1422.78807"	"0.05"	"0.00003"	"10/64"	"10"	"64"	"480757.05657959"	"HCD"	"MS2"	"15.02618"	"45.8"	"100.000"	"80.5730"	"27754"	"27754"	"27732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.8"	""	"50.0"	""	"44.5"	""	"84.7"	""	"100.3"	"101.7"	""	"928"	"26"	"36.000"	"29.000"	"0.11628346934069"	"27"	"0.000264"	"0.006151"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"474.93683"	"1422.79593"	"1422.79930"	"-2.37"	"-0.00112"	"4/80"	"4"	"80"	"545927.771789551"	"HCD"	"MS2"	"57.50805"	"33.7"	"100.000"	"71.7937"	"24199"	"24199"	"24171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.0"	""	"47.9"	""	"42.8"	""	"57.6"	"1.0"	"64.8"	"60.0"	""	"915"	"12"	"36.000"	"29.000"	"3.01572057074277"	"21"	"0.00511"	"0.06546"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNVNFEK"	"[K].dVNVNFEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83868"	"Prostaglandin E synthase 3 OS=Rattus norvegicus OX=10116 GN=Ptges3 PE=1 SV=2"	"P83868"	"Prostaglandin E synthase 3 OS=Rattus norvegicus OX=10116 GN=Ptges3 PE=1 SV=2"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"474.93719"	"1422.79703"	"1422.79930"	"-1.60"	"-0.00076"	"7/78"	"7"	"78"	"375950.92956543"	"HCD"	"MS2"	"60.87677"	"21.3"	"100.000"	"76.4457"	"26086"	"26086"	"26058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"25.8"	""	"29.6"	""	"32.3"	""	"42.3"	"48.8"	""	"905"	"17"	"36.000"	"29.000"	"0.815865527738955"	"19"	"0.003401"	"0.03811"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"474.93732"	"1422.79740"	"1422.79930"	"-1.34"	"-0.00063"	"6/80"	"6"	"80"	"3173447.34570313"	"HCD"	"MS2"	"7.403364"	"105.8"	"100.000"	"66.7661"	"22125"	"22125"	"22107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.3"	""	"134.9"	""	"140.0"	""	"170.9"	""	"188.6"	"201.9"	""	"906"	"36"	"36.000"	"29.000"	"0.011643892895943"	"19"	"0"	"0.0002155"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"711.90240"	"1422.79753"	"1422.79930"	"-1.24"	"-0.00088"	"8/80"	"8"	"80"	"25537128.168457"	"HCD"	"MS2"	"0"	"838.5"	"41.430"	"66.4030"	"22014"	"22014"	"22004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1640.1"	""	"1020.9"	""	"1035.3"	""	"1381.4"	"5.3"	"1376.4"	"1468.7"	""	"906"	"56"	"36.000"	"29.000"	"0.000107919071961949"	"22"	"0"	"2.175E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"474.93738"	"1422.79758"	"1422.79930"	"-1.21"	"-0.00057"	"8/80"	"8"	"80"	"13553562.0056152"	"HCD"	"MS2"	"5.037547"	"329.8"	"81.195"	"66.4706"	"22008"	"22008"	"21992"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"593.4"	""	"402.4"	""	"416.0"	""	"549.2"	""	"564.1"	"603.4"	""	"892"	"38"	"36.000"	"29.000"	"0.00665786306672232"	"19"	"0"	"5.913E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"711.90247"	"1422.79766"	"1422.79930"	"-1.16"	"-0.00082"	"6/80"	"6"	"80"	"400421.930297852"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"67.3493"	"22394"	"22394"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.7"	""	"46.7"	""	"44.6"	""	"73.8"	"2.5"	"76.1"	"76.8"	""	"892"	"30"	"36.000"	"29.000"	"0.045955220971696"	"25"	"0.0001991"	"0.003942"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"711.90247"	"1422.79766"	"1422.79930"	"-1.16"	"-0.00082"	"9/80"	"9"	"80"	"10340155.9266968"	"HCD"	"MS2"	"0"	"614.3"	"78.847"	"66.6929"	"22096"	"22096"	"22083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1124.2"	""	"702.9"	""	"801.9"	""	"964.4"	""	"1062.8"	"1162.1"	""	"892"	"57"	"36.000"	"29.000"	"8.83761053509073E-05"	"22"	"0"	"5.333E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"474.93741"	"1422.79767"	"1422.79930"	"-1.14"	"-0.00054"	"8/80"	"8"	"80"	"3224484.45922852"	"HCD"	"MS2"	"2.547997"	"107.9"	"100.000"	"66.7879"	"22166"	"22166"	"22152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.2"	""	"128.8"	""	"141.6"	""	"163.7"	""	"197.1"	"204.3"	""	"892"	"38"	"36.000"	"29.000"	"0.00679727528193591"	"19"	"0"	"7.176E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"474.93744"	"1422.79776"	"1422.79930"	"-1.08"	"-0.00051"	"8/80"	"8"	"80"	"12386597.0537109"	"HCD"	"MS2"	"4.59226"	"377.7"	"100.000"	"66.5107"	"22057"	"22057"	"22048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"678.0"	""	"445.1"	""	"480.1"	""	"605.8"	""	"656.4"	"713.8"	""	"894"	"38"	"36.000"	"29.000"	"0.00664213232102292"	"19"	"0"	"0.0001117"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"474.93747"	"1422.79786"	"1422.79930"	"-1.02"	"-0.00048"	"7/80"	"7"	"80"	"3783552.97009277"	"HCD"	"MS2"	"0"	"128.0"	"100.000"	"66.2356"	"21947"	"21947"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.7"	""	"169.9"	""	"169.6"	""	"219.4"	""	"206.7"	"217.4"	""	"894"	"48"	"36.000"	"29.000"	"0.000650590209020139"	"20"	"0"	"5.443E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"474.93747"	"1422.79786"	"1422.79930"	"-1.02"	"-0.00048"	"6/74"	"6"	"74"	"4946794.45977783"	"HCD"	"MS2"	"18.85981"	"164.0"	"100.000"	"50.1022"	"15396"	"15396"	"15371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.4"	""	"213.0"	""	"196.1"	""	"277.0"	"1.2"	"300.8"	"307.0"	""	"894"	"34"	"36.000"	"29.000"	"0.0169944660155291"	"21"	"0.0001991"	"0.002971"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"711.90265"	"1422.79802"	"1422.79930"	"-0.90"	"-0.00064"	"9/80"	"9"	"80"	"960939.94140625"	"HCD"	"MS2"	"0"	"86.5"	"100.000"	"67.0167"	"22227"	"22227"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.8"	""	"96.2"	""	"110.5"	""	"135.7"	""	"157.9"	"169.6"	""	"892"	"57"	"36.000"	"29.000"	"9.87040240484115E-05"	"22"	"0"	"1.938E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"711.90265"	"1422.79802"	"1422.79930"	"-0.90"	"-0.00064"	"8/80"	"8"	"80"	"13417014.3128052"	"HCD"	"MS2"	"0"	"689.6"	"67.829"	"66.6757"	"22122"	"22122"	"22114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1246.8"	""	"818.6"	""	"882.5"	""	"1091.5"	""	"1192.4"	"1301.1"	""	"892"	"56"	"36.000"	"29.000"	"0.000105035198061762"	"22"	"0"	"1.367E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.2632"	"0.0000"	"1"	"1"	"1"	"474.93756"	"1422.79813"	"1422.79930"	"-0.82"	"-0.00039"	"5/80"	"5"	"80"	"841566.261657715"	"HCD"	"MS2"	"43.72223"	"36.6"	"100.000"	"71.4280"	"24019"	"24019"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"48.0"	""	"57.0"	""	"55.3"	""	"64.6"	"66.5"	""	"892"	"19"	"36.000"	"29.000"	"0.502730065454277"	"27"	"0.002166"	"0.01989"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNVNFEK"	"[K].dVNVNFEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83868"	"Prostaglandin E synthase 3 OS=Rattus norvegicus OX=10116 GN=Ptges3 PE=1 SV=2"	"P83868"	"Prostaglandin E synthase 3 OS=Rattus norvegicus OX=10116 GN=Ptges3 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"711.90271"	"1422.79814"	"1422.79930"	"-0.81"	"-0.00058"	"7/78"	"7"	"78"	"462709.017883301"	"HCD"	"MS2"	"18.21626"	"47.1"	"100.000"	"76.4319"	"26080"	"26080"	"26058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.2"	""	"40.9"	""	"56.6"	""	"73.5"	""	"112.7"	"115.4"	""	"898"	"40"	"36.000"	"29.000"	"0.00480005640770973"	"26"	"9.9E-05"	"0.0005921"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"711.90271"	"1422.79814"	"1422.79930"	"-0.81"	"-0.00058"	"9/80"	"9"	"80"	"28133222.8527832"	"HCD"	"MS2"	"0"	"938.8"	"45.013"	"66.4133"	"21985"	"21985"	"21976"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1772.4"	""	"1119.7"	""	"1132.2"	""	"1572.1"	""	"1572.3"	"1725.0"	""	"898"	"57"	"36.000"	"29.000"	"9.68827239709549E-05"	"23"	"0"	"8.911E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"474.93759"	"1422.79822"	"1422.79930"	"-0.76"	"-0.00036"	"6/80"	"6"	"80"	"852404.626708984"	"HCD"	"MS2"	"24.95085"	"38.9"	"100.000"	"71.4853"	"24073"	"24073"	"24050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"62.8"	""	"54.2"	""	"55.9"	""	"67.8"	"75.4"	""	"940"	"39"	"36.000"	"29.000"	"0.0063547410470131"	"27"	"0"	"0.0001734"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"474.93759"	"1422.79822"	"1422.79930"	"-0.76"	"-0.00036"	"8/80"	"8"	"80"	"2276437.18963623"	"HCD"	"MS2"	"12.96661"	"77.8"	"100.000"	"66.1771"	"21890"	"21890"	"21865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.2"	""	"104.3"	""	"100.0"	""	"137.7"	""	"131.0"	"123.5"	""	"940"	"37"	"36.000"	"29.000"	"0.00908025108997954"	"19"	"0.0001686"	"0.001096"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSDQTWVK"	"[R].tSDQTWVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"711.90277"	"1422.79827"	"1422.79930"	"-0.73"	"-0.00052"	"7/72"	"7"	"72"	"1164140.48406982"	"HCD"	"MS2"	"0"	"102.5"	"100.000"	"53.6629"	"16842"	"16842"	"16822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.2"	""	"116.3"	""	"127.6"	""	"194.7"	""	"198.4"	"192.8"	""	"940"	"44"	"36.000"	"29.000"	"0.00202347506931104"	""	"0.001488"	"0.01209"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"711.90277"	"1422.79827"	"1422.79930"	"-0.73"	"-0.00052"	"7/74"	"7"	"74"	"3190598.63287354"	"HCD"	"MS2"	"0"	"228.7"	"100.000"	"50.3828"	"15510"	"15510"	"15492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.0"	""	"262.8"	""	"301.9"	""	"372.3"	"0.7"	"434.8"	"439.0"	""	"940"	"33"	"36.000"	"29.000"	"0.0230726701791723"	"17"	"0.0001991"	"0.002793"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"711.90283"	"1422.79839"	"1422.79930"	"-0.64"	"-0.00046"	"7/74"	"7"	"74"	"1703477.02929688"	"HCD"	"MS2"	"7.150446"	"137.8"	"100.000"	"50.0654"	"15381"	"15381"	"15355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"243.8"	""	"170.8"	""	"176.4"	""	"230.3"	""	"236.9"	"245.9"	""	"927"	"34"	"36.000"	"29.000"	"0.0169063454400019"	"18"	"0.0001991"	"0.003577"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"711.90283"	"1422.79839"	"1422.79930"	"-0.64"	"-0.00046"	"7/74"	"7"	"74"	"3855845.82269287"	"HCD"	"MS2"	"0"	"304.4"	"100.000"	"50.7105"	"15609"	"15609"	"15590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"480.5"	""	"349.5"	""	"404.1"	""	"491.1"	""	"568.4"	"592.5"	""	"927"	"36"	"36.000"	"29.000"	"0.0111956609676523"	"20"	"0.0001991"	"0.003194"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"711.90302"	"1422.79875"	"1422.79930"	"-0.38"	"-0.00027"	"8/80"	"8"	"80"	"2200264.39239502"	"HCD"	"MS2"	"0"	"192.1"	"100.000"	"66.1380"	"21874"	"21874"	"21849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.1"	""	"257.1"	""	"237.0"	""	"329.0"	""	"303.4"	"326.9"	""	"922"	"54"	"36.000"	"29.000"	"0.000194402088080576"	"22"	"0"	"1.058E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"474.93781"	"1422.79886"	"1422.79930"	"-0.31"	"-0.00015"	"6/74"	"6"	"74"	"4631563.51879883"	"HCD"	"MS2"	"69.6972"	"158.8"	"100.000"	"50.4439"	"15500"	"15500"	"15478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.1"	""	"217.7"	""	"191.9"	""	"283.6"	"2.8"	"281.7"	"279.2"	""	"922"	"30"	"36.000"	"29.000"	"0.045154488327341"	"21"	"0.0001991"	"0.002932"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYDISNPK"	"[R].qYDISNPk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"711.90308"	"1422.79888"	"1422.79930"	"-0.30"	"-0.00021"	"7/74"	"7"	"74"	"1596503.45092773"	"HCD"	"MS2"	"10.25755"	"132.9"	"100.000"	"50.4185"	"15490"	"15490"	"15462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"228.4"	""	"179.8"	""	"180.5"	""	"211.7"	""	"232.5"	"227.9"	""	"922"	"36"	"36.000"	"29.000"	"0.012294218443444"	"19"	"0.0001686"	"0.001238"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"711.90332"	"1422.79936"	"1422.79930"	"0.04"	"0.00003"	"8/80"	"8"	"80"	"1245677.7713623"	"HCD"	"MS2"	"19.02858"	"108.2"	"100.000"	"66.1370"	"21907"	"21907"	"21878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.0"	""	"130.7"	""	"137.4"	""	"180.3"	"0.6"	"169.8"	"193.1"	""	"928"	"58"	"36.000"	"29.000"	"8.04485054957919E-05"	"23"	"0"	"2.245E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNVNFEK"	"[K].dVNVNFEk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P83868"	"Prostaglandin E synthase 3 OS=Rattus norvegicus OX=10116 GN=Ptges3 PE=1 SV=2"	"P83868"	"Prostaglandin E synthase 3 OS=Rattus norvegicus OX=10116 GN=Ptges3 PE=1 SV=2"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"711.90338"	"1422.79949"	"1422.79930"	"0.13"	"0.00009"	"11/78"	"11"	"78"	"275517.178283691"	"HCD"	"MS2"	"20.53637"	"28.5"	"100.000"	"76.4381"	"26051"	"26051"	"26032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.7"	""	"28.9"	""	"30.7"	""	"45.5"	""	"63.2"	"70.9"	""	"931"	"27"	"36.000"	"29.000"	"0.090765266118737"	"21"	"0.0001686"	"0.001525"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"711.90344"	"1422.79961"	"1422.79930"	"0.22"	"0.00015"	"8/80"	"8"	"80"	"1401622.15814209"	"HCD"	"MS2"	"0"	"125.1"	"100.000"	"66.9672"	"22239"	"22239"	"22219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.5"	""	"157.6"	""	"153.5"	""	"184.8"	""	"227.0"	"246.3"	""	"905"	"58"	"36.000"	"29.000"	"7.13869099538955E-05"	"23"	"0"	"8.059E-06"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"474.93811"	"1422.79978"	"1422.79930"	"0.34"	"0.00016"	"5/80"	"5"	"80"	"620097.837463379"	"HCD"	"MS2"	"35.1367"	"25.8"	"100.000"	"67.0584"	"22244"	"22244"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.7"	""	"31.6"	""	"33.6"	""	"38.2"	"0.6"	"52.8"	"53.5"	""	"905"	"17"	"36.000"	"29.000"	"0.923886419962963"	"16"	"0.0001991"	"0.005942"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSDQTWVK"	"[R].tSDQTWVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"711.90381"	"1422.80034"	"1422.79930"	"0.73"	"0.00052"	"7/72"	"7"	"72"	"748274.561218262"	"HCD"	"MS2"	"28.43002"	"69.9"	"100.000"	"53.9159"	"16912"	"16912"	"16889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.6"	""	"90.7"	""	"82.6"	""	"145.1"	""	"142.4"	"121.7"	""	"905"	"24"	"36.000"	"29.000"	"0.169285041193104"	"23"	"0.008718"	"0.1101"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"711.90411"	"1422.80095"	"1422.79930"	"1.16"	"0.00083"	"6/80"	"6"	"80"	"1107460.11761475"	"HCD"	"MS2"	"0"	"110.0"	"100.000"	"71.4025"	"24039"	"24039"	"24021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.4"	""	"151.6"	""	"171.5"	""	"164.7"	""	"199.5"	"212.9"	""	"896"	"19"	"36.000"	"29.000"	"0.577135799158524"	"21"	"0.001453"	"0.01159"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGGGDVAFVK"	"[R].dGGGDVAFVk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"711.90479"	"1422.80229"	"1422.79930"	"2.10"	"0.00150"	"6/80"	"6"	"80"	"1033314.32897949"	"HCD"	"MS2"	"0"	"104.7"	"100.000"	"71.2922"	"23963"	"23963"	"23942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.0"	""	"140.4"	""	"149.6"	""	"151.4"	""	"201.8"	"200.9"	""	"902"	"22"	"36.000"	"29.000"	"0.290520338747345"	"22"	"0.002462"	"0.02321"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSATDLQTK"	"[K].tSATDLQTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"711.91364"	"1422.81999"	"1422.82043"	"-0.31"	"-0.00022"	"14/82"	"14"	"82"	"957846.791442871"	"HCD"	"MS2"	"0"	"82.6"	"100.000"	"40.4549"	"11447"	"11447"	"11421"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.3"	""	"103.3"	""	"108.0"	""	"126.5"	"2.3"	"146.3"	"160.8"	""	"736"	"54"	"35.000"	"28.000"	"0.000135159886583295"	"28"	"0"	"5.836E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSATDLQTK"	"[K].tSATDLQTk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"Q9Z1N4"	"3'(2'),5'-bisphosphate nucleotidase 1 OS=Rattus norvegicus OX=10116 GN=Bpnt1 PE=1 SV=1"	"0"	"2"	"2"	"0.7544"	"0.0000"	"1"	"1"	"1"	"711.91418"	"1422.82109"	"1422.82043"	"0.47"	"0.00033"	"14/82"	"14"	"82"	"994560.825805664"	"HCD"	"MS2"	"0"	"83.7"	"100.000"	"40.3639"	"11444"	"11444"	"11418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.3"	""	"107.0"	""	"107.8"	""	"129.7"	"2.6"	"146.7"	"162.2"	""	"743"	"57"	"35.000"	"28.000"	"7.55020629562806E-05"	""	"0"	"5.502E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEMEVVK"	"[K].tLEmEVVk.[E]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"711.91705"	"1422.82683"	"1422.82782"	"-0.70"	"-0.00050"	"12/64"	"12"	"64"	"876729.785217285"	"HCD"	"MS2"	"3.82889"	"64.9"	"100.000"	"62.6959"	"20474"	"20474"	"20456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.4"	""	"50.0"	""	"52.4"	""	"178.9"	"0.6"	"135.7"	"150.9"	""	"718"	"28"	"35.000"	"28.000"	"0.0538386855945352"	"23"	"0.009348"	"0.1219"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEANAPAFDR"	"[R].gFEANAPAFDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"Q62910"	"Synaptojanin-1 OS=Rattus norvegicus OX=10116 GN=Synj1 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"712.36078"	"1423.71428"	"1423.71674"	"-1.73"	"-0.00123"	"7/106"	"7"	"106"	"458319.789245605"	"HCD"	"MS2"	"36.48859"	"30.2"	"100.000"	"68.4782"	"22853"	"22853"	"22826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.0"	""	"37.0"	""	"39.4"	""	"46.3"	"0.7"	"57.7"	"64.5"	""	"680"	"17"	"35.000"	"28.000"	"0.622986903606212"	"20"	"0.0001991"	"0.003597"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"712.37201"	"1423.73674"	"1423.73787"	"-0.79"	"-0.00057"	"9/104"	"9"	"104"	"462892.975708008"	"HCD"	"MS2"	"10.45942"	"34.9"	"100.000"	"78.3357"	"26843"	"26843"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"36.0"	""	"42.6"	""	"63.8"	"0.9"	"74.6"	"71.1"	""	"796"	"52"	"35.000"	"29.000"	"0.000269081024206008"	"20"	"0"	"3.376E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"712.37238"	"1423.73747"	"1423.73787"	"-0.28"	"-0.00020"	"9/104"	"9"	"104"	"640245.836364746"	"HCD"	"MS2"	"12.48382"	"47.6"	"100.000"	"78.1630"	"26746"	"26746"	"26726"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"51.7"	""	"53.2"	""	"85.1"	""	"94.1"	"106.7"	""	"796"	"69"	"35.000"	"29.000"	"4.52775659757725E-06"	"24"	"0"	"1.497E-06"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFSLDNGDLR"	"[K].tGFSLDNGDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"O35987"	"NSFL1 cofactor p47 OS=Rattus norvegicus OX=10116 GN=Nsfl1c PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"712.37274"	"1423.73821"	"1423.73787"	"0.23"	"0.00017"	"9/104"	"9"	"104"	"702785.00402832"	"HCD"	"MS2"	"30.25197"	"55.0"	"100.000"	"78.0154"	"26714"	"26714"	"26699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.4"	""	"57.6"	""	"71.4"	""	"92.6"	""	"107.8"	"118.4"	""	"824"	"53"	"36.000"	"29.000"	"0.000186593802920292"	"21"	"0"	"4.101E-06"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDTNPEK"	"[R].fDDTNPEk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"712.37665"	"1423.74602"	"1423.74693"	"-0.64"	"-0.00046"	"11/72"	"11"	"72"	"497152.847961426"	"HCD"	"MS2"	"0"	"50.4"	"100.000"	"49.2364"	"15009"	"15009"	"14982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.8"	""	"50.5"	""	"48.2"	""	"93.6"	""	"109.8"	"112.9"	""	"837"	"27"	"36.000"	"29.000"	"0.0763300351420768"	"18"	"0.0001991"	"0.002142"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDNFVDK"	"[K].eVDNFVDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"712.39453"	"1423.78179"	"1423.78332"	"-1.07"	"-0.00077"	"14/76"	"14"	"76"	"836634.997253418"	"HCD"	"MS2"	"8.186296"	"84.3"	"100.000"	"71.1515"	"23937"	"23937"	"23916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.3"	""	"86.7"	""	"89.2"	""	"161.6"	""	"196.3"	"183.0"	""	"883"	"45"	"36.000"	"29.000"	"0.00156289826088336"	"26"	"9.9E-05"	"0.0004525"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDNFVDK"	"[K].eVDNFVDk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"Q66H80"	"Coatomer subunit delta OS=Rattus norvegicus OX=10116 GN=Arcn1 PE=2 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"712.39508"	"1423.78288"	"1423.78332"	"-0.30"	"-0.00022"	"14/76"	"14"	"76"	"807281.703186035"	"HCD"	"MS2"	"15.26478"	"84.5"	"100.000"	"71.0389"	"23860"	"23860"	"23838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.8"	""	"76.3"	""	"87.8"	""	"157.5"	""	"207.5"	"184.2"	""	"915"	"46"	"36.000"	"29.000"	"0.00106755706349356"	"27"	"0"	"0.000223"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPGPHFEER"	"[R].iLPGPHFEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"0"	"3"	"3"	"0.6481"	"0.0000"	"1"	"1"	"1"	"475.26718"	"1423.78699"	"1423.78952"	"-1.77"	"-0.00084"	"8/74"	"8"	"74"	"1719026.36560059"	"HCD"	"MS2"	"18.57998"	"40.7"	"100.000"	"63.0928"	"20668"	"20668"	"20646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.8"	""	"55.4"	""	"57.3"	""	"64.9"	""	"81.4"	"70.6"	""	"892"	"54"	"36.000"	"29.000"	"0.000164185522244569"	""	"0"	"6.177E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILPGPHFEER"	"[R].iLPGPHFEER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"Q63615"	"Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus OX=10116 GN=Vps33a PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"475.26727"	"1423.78727"	"1423.78952"	"-1.58"	"-0.00075"	"8/74"	"8"	"74"	"2174047.59356689"	"HCD"	"MS2"	"22.21022"	"51.6"	"100.000"	"63.1518"	"20660"	"20660"	"20641"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.4"	""	"62.0"	""	"66.6"	""	"85.2"	"0.5"	"109.9"	"102.4"	""	"900"	"46"	"36.000"	"29.000"	"0.00106711816754774"	""	"0"	"7.381E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"475.27460"	"1423.80924"	"1423.81064"	"-0.99"	"-0.00047"	"8/94"	"8"	"94"	"681899.655700684"	"HCD"	"MS2"	"8.92815"	"11.3"	"100.000"	"89.5311"	"31331"	"31331"	"31319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"18.4"	""	"14.4"	""	"17.6"	""	"18.2"	"21.0"	""	"801"	"29"	"36.000"	"29.000"	"0.0555395709463191"	"17"	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"475.27463"	"1423.80933"	"1423.81064"	"-0.92"	"-0.00044"	"10/94"	"10"	"94"	"872931.531494141"	"HCD"	"MS2"	"5.615522"	"13.6"	"100.000"	"90.4629"	"31706"	"31706"	"31692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"15.9"	""	"18.5"	""	"24.7"	""	"26.6"	"26.9"	""	"800"	"30"	"36.000"	"29.000"	"0.0379367385320359"	"16"	"0.0001991"	"0.002647"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"475.27463"	"1423.80933"	"1423.81064"	"-0.92"	"-0.00044"	"9/94"	"9"	"94"	"3175728.30450439"	"HCD"	"MS2"	"1.804467"	"22.9"	"100.000"	"89.8245"	"31448"	"31448"	"31432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"27.6"	""	"32.0"	""	"36.9"	""	"36.6"	"43.7"	""	"800"	"32"	"36.000"	"29.000"	"0.0262458106521162"	"18"	"0.0001991"	"0.00575"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"475.27466"	"1423.80942"	"1423.81064"	"-0.86"	"-0.00041"	"9/94"	"9"	"94"	"1747318.65093994"	"HCD"	"MS2"	"4.829383"	"16.1"	"100.000"	"90.2546"	"31661"	"31661"	"31652"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"20.6"	""	"21.9"	""	"26.6"	""	"34.2"	"30.2"	""	"800"	"30"	"36.000"	"29.000"	"0.0408375793483072"	"17"	"0.0001686"	"0.001739"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"475.27475"	"1423.80970"	"1423.81064"	"-0.67"	"-0.00032"	"11/94"	"11"	"94"	"3821102.12481689"	"HCD"	"MS2"	"4.03957"	"27.4"	"100.000"	"90.1174"	"31568"	"31568"	"31551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.1"	""	"33.5"	""	"35.9"	""	"47.4"	""	"50.5"	"44.4"	""	"804"	"39"	"36.000"	"29.000"	"0.00541035862330491"	"17"	"0.0001991"	"0.002588"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"712.40851"	"1423.80974"	"1423.81064"	"-0.64"	"-0.00045"	"5/94"	"5"	"94"	"751744.836547852"	"HCD"	"MS2"	"22.28658"	"42.6"	"100.000"	"89.4457"	"31298"	"31298"	"31281"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.3"	""	"51.9"	""	"60.2"	""	"62.3"	"0.4"	"78.9"	"69.4"	""	"804"	"21"	"36.000"	"29.000"	"0.285907832488638"	"19"	"9.9E-05"	"0.0009429"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"712.40851"	"1423.80974"	"1423.81064"	"-0.64"	"-0.00045"	"7/94"	"7"	"94"	"771969.777832031"	"HCD"	"MS2"	"7.004877"	"37.6"	"100.000"	"90.4803"	"31751"	"31751"	"31733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.0"	""	"49.0"	""	"55.6"	""	"61.6"	""	"58.3"	"67.1"	""	"804"	"23"	"36.000"	"29.000"	"0.181646089638719"	"20"	"0.003001"	"0.03232"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"712.40863"	"1423.80998"	"1423.81064"	"-0.46"	"-0.00033"	"8/94"	"8"	"94"	"4331797.4395752"	"HCD"	"MS2"	"0"	"154.5"	"100.000"	"90.3040"	"31643"	"31643"	"31632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"270.6"	""	"159.8"	""	"204.7"	""	"236.1"	"0.1"	"302.6"	"289.8"	""	"810"	"34"	"36.000"	"29.000"	"0.0158655460228652"	"21"	"0.0001991"	"0.003371"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"712.40863"	"1423.80998"	"1423.81064"	"-0.46"	"-0.00033"	"16/94"	"16"	"94"	"9351787.27575684"	"HCD"	"MS2"	"0"	"334.1"	"100.000"	"90.0091"	"31524"	"31524"	"31507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"632.9"	"3.0"	"400.2"	""	"433.6"	""	"528.9"	"0.3"	"569.3"	"591.6"	""	"810"	"31"	"36.000"	"29.000"	"0.0327683839167245"	"20"	"0"	"0.0001256"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"475.27499"	"1423.81043"	"1423.81064"	"-0.15"	"-0.00007"	"8/94"	"8"	"94"	"773948.607849121"	"HCD"	"MS2"	"8.738285"	"12.0"	"100.000"	"89.4377"	"31334"	"31334"	"31316"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"14.0"	""	"11.8"	""	"22.7"	""	"25.4"	"26.5"	""	"798"	"27"	"36.000"	"29.000"	"0.0765548827527445"	"17"	"0.0001686"	"0.001379"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"712.40894"	"1423.81059"	"1423.81064"	"-0.04"	"-0.00002"	"8/94"	"8"	"94"	"8823116.24023438"	"HCD"	"MS2"	"0"	"322.5"	"100.000"	"89.9020"	"31520"	"31520"	"31509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"588.5"	""	"388.2"	""	"437.5"	""	"510.2"	""	"544.7"	"584.5"	""	"798"	"33"	"36.000"	"29.000"	"0.0217256558484126"	"21"	"0"	"0.0001514"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"475.27509"	"1423.81070"	"1423.81064"	"0.04"	"0.00002"	"5/94"	"5"	"94"	"3170720.59533691"	"HCD"	"MS2"	"2.474626"	"22.5"	"100.000"	"89.7241"	"31448"	"31448"	"31434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.7"	""	"25.9"	""	"31.3"	""	"31.8"	""	"41.5"	"42.1"	""	"798"	"35"	"36.000"	"29.000"	"0.011401786268066"	"17"	"0.0001991"	"0.002581"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"712.40900"	"1423.81072"	"1423.81064"	"0.05"	"0.00004"	"7/94"	"7"	"94"	"802583.879699707"	"HCD"	"MS2"	"6.806051"	"48.7"	"100.000"	"89.3384"	"31294"	"31294"	"31280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.0"	""	"62.0"	""	"65.6"	""	"79.2"	"1.3"	"88.7"	"91.8"	""	"798"	"13"	"36.000"	"29.000"	"1.88787352325631"	"18"	"0.003568"	"0.03963"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"712.40900"	"1423.81072"	"1423.81064"	"0.05"	"0.00004"	"8/94"	"8"	"94"	"4766102.4644165"	"HCD"	"MS2"	"0"	"179.9"	"100.000"	"90.1969"	"31638"	"31638"	"31625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.9"	""	"194.7"	""	"254.8"	""	"281.1"	"0.3"	"316.6"	"331.3"	""	"798"	"30"	"36.000"	"29.000"	"0.0381042041822553"	"21"	"0.0001686"	"0.001288"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"712.40900"	"1423.81072"	"1423.81064"	"0.05"	"0.00004"	"8/94"	"8"	"94"	"4549804.64086914"	"HCD"	"MS2"	"0"	"166.0"	"100.000"	"89.7231"	"31408"	"31408"	"31397"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"307.1"	""	"191.4"	""	"220.5"	""	"265.2"	"1.0"	"281.4"	"303.8"	""	"798"	"32"	"36.000"	"29.000"	"0.025584262105748"	"20"	"0"	"7.129E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"712.40918"	"1423.81108"	"1423.81064"	"0.31"	"0.00022"	"9/94"	"9"	"94"	"4730268.55255127"	"HCD"	"MS2"	"0"	"171.8"	"100.000"	"89.6319"	"31412"	"31412"	"31398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"327.6"	"3.2"	"191.0"	""	"232.6"	""	"271.2"	""	"296.4"	"304.5"	""	"799"	"31"	"36.000"	"29.000"	"0.0288082437933568"	"21"	"0"	"0.0001305"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"475.27524"	"1423.81116"	"1423.81064"	"0.36"	"0.00017"	"11/94"	"11"	"94"	"4097209.31121826"	"HCD"	"MS2"	"3.368585"	"27.5"	"100.000"	"89.9918"	"31556"	"31556"	"31544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"27.3"	""	"33.9"	""	"42.5"	"2.0"	"53.2"	"55.0"	""	"799"	"32"	"36.000"	"29.000"	"0.0251487720051451"	"18"	"0.0001991"	"0.002303"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIIPNPQER"	"[K].iDIIPNPQER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"712.40936"	"1423.81145"	"1423.81064"	"0.57"	"0.00040"	"8/94"	"8"	"94"	"599857.010620117"	"HCD"	"MS2"	"10.47625"	"30.0"	"100.000"	"90.6154"	"31767"	"31767"	"31747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"39.3"	""	"44.1"	""	"47.5"	""	"48.5"	"52.4"	""	"800"	"26"	"36.000"	"29.000"	"0.108158334564354"	"20"	"0.0001991"	"0.004872"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLVYQAK"	"[R].eDLVYQAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"712.41248"	"1423.81767"	"1423.81970"	"-1.42"	"-0.00101"	"14/62"	"14"	"62"	"627329.224853516"	"HCD"	"MS2"	"10.86306"	"60.7"	"100.000"	"67.2930"	"22340"	"22340"	"22311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"62.0"	""	"65.8"	""	"96.8"	""	"153.4"	"144.8"	""	"716"	"45"	"35.000"	"28.000"	"0.00121306207897834"	"26"	"0"	"0.0001869"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEAFETAK"	"[K].aVEAFETAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"475.27777"	"1423.81876"	"1423.81970"	"-0.66"	"-0.00031"	"6/72"	"6"	"72"	"1091594.55041504"	"HCD"	"MS2"	"34.86975"	"43.2"	"100.000"	"70.4675"	"23628"	"23628"	"23607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.2"	""	"61.2"	""	"75.9"	""	"63.4"	"0.9"	"70.1"	"80.9"	""	"729"	"34"	"35.000"	"28.000"	"0.013889849262703"	"25"	"0.0001991"	"0.002503"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEAFETAK"	"[K].aVEAFETAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"475.27817"	"1423.81995"	"1423.81970"	"0.17"	"0.00008"	"10/72"	"10"	"72"	"1031845.90527344"	"HCD"	"MS2"	"39.34316"	"41.9"	"100.000"	"70.6143"	"23721"	"23721"	"23701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.5"	""	"59.4"	""	"65.1"	""	"64.0"	""	"78.1"	"71.5"	""	"712"	"30"	"35.000"	"28.000"	"0.0382340230793483"	"22"	"0.0001991"	"0.002915"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVEAFETAK"	"[K].aVEAFETAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"P27867"	"Sorbitol dehydrogenase OS=Rattus norvegicus OX=10116 GN=Sord PE=1 SV=4"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"712.41437"	"1423.82146"	"1423.81970"	"1.23"	"0.00088"	"8/72"	"8"	"72"	"374084.506164551"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"70.3493"	"23614"	"23614"	"23592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.4"	""	"48.8"	""	"52.4"	""	"50.8"	""	"60.1"	"61.1"	""	"693"	"46"	"35.000"	"28.000"	"0.000934766713342166"	"24"	"0"	"3.637E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLVYQAK"	"[R].eDLVYQAk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"712.41571"	"1423.82414"	"1423.81970"	"3.12"	"0.00222"	"6/62"	"6"	"62"	"484028.82824707"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"67.4346"	"22429"	"22429"	"22400"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.9"	""	"48.4"	""	"59.3"	""	"71.9"	""	"119.5"	"121.4"	""	"675"	"43"	"35.000"	"28.000"	"0.00179586537502543"	"26"	"9.9E-05"	"0.0007322"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.85327"	"1424.69927"	"1424.70076"	"-1.05"	"-0.00075"	"7/84"	"7"	"84"	"2071427.01239014"	"HCD"	"MS2"	"0"	"115.7"	"100.000"	"71.9248"	"24252"	"24252"	"24234"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.9"	""	"143.5"	""	"128.8"	""	"154.4"	""	"260.2"	"257.9"	""	"550"	"44"	"34.000"	"27.000"	"0.00097798612606471"	"16"	"0"	"0.0002686"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"712.85333"	"1424.69939"	"1424.70076"	"-0.96"	"-0.00069"	"7/84"	"7"	"84"	"1921845.19110107"	"HCD"	"MS2"	"0"	"113.5"	"100.000"	"71.8974"	"24210"	"24210"	"24191"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.2"	""	"133.1"	""	"120.5"	""	"148.3"	""	"255.1"	"263.7"	""	"551"	"44"	"34.000"	"27.000"	"0.0011301123037281"	"18"	"0"	"0.0001443"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"712.85388"	"1424.70049"	"1424.70076"	"-0.19"	"-0.00014"	"7/84"	"7"	"84"	"299708.932006836"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"72.2034"	"24331"	"24331"	"24304"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"30.3"	""	"32.9"	""	"49.9"	""	"59.5"	"57.7"	""	"554"	"42"	"34.000"	"27.000"	"0.00169230940898844"	"18"	"0"	"3.016E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"712.85406"	"1424.70085"	"1424.70076"	"0.07"	"0.00005"	"6/84"	"6"	"84"	"796583.972351074"	"HCD"	"MS2"	"40.62132"	"66.9"	"100.000"	"71.6304"	"24132"	"24132"	"24107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.9"	"2.0"	"89.8"	""	"83.0"	""	"105.1"	""	"132.3"	"140.3"	""	"563"	"18"	"34.000"	"27.000"	"0.422161281193918"	"14"	"9.9E-05"	"0.000408"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"712.85425"	"1424.70122"	"1424.70076"	"0.32"	"0.00023"	"7/84"	"7"	"84"	"479232.609130859"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"72.2466"	"24378"	"24378"	"24358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"40.6"	""	"37.8"	""	"57.1"	""	"73.2"	"71.5"	""	"555"	"48"	"34.000"	"27.000"	"0.000477818529558617"	"19"	"0"	"5.039E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNEEVEAYR"	"[K].wNEEVEAYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"712.85437"	"1424.70146"	"1424.70076"	"0.49"	"0.00035"	"7/84"	"7"	"84"	"962443.217773438"	"HCD"	"MS2"	"41.37074"	"71.2"	"100.000"	"71.5800"	"24081"	"24081"	"24052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.0"	""	"82.7"	""	"89.5"	""	"100.4"	""	"153.9"	"149.6"	""	"555"	"38"	"34.000"	"27.000"	"0.00476719577436231"	"19"	"0"	"0.0002136"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFPENFTER"	"[R].gVFPENFTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"712.87250"	"1424.73772"	"1424.73715"	"0.40"	"0.00029"	"6/88"	"6"	"88"	"752296.439453125"	"HCD"	"MS2"	"46.75662"	"56.2"	"100.000"	"85.0434"	"29531"	"29531"	"29511"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.3"	""	"54.1"	""	"70.2"	""	"91.7"	"0.7"	"99.6"	"123.3"	""	"759"	"16"	"35.000"	"28.000"	"0.923021421443513"	"20"	"0.004357"	"0.05122"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFPENFTER"	"[R].gVFPENFTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"712.87329"	"1424.73931"	"1424.73715"	"1.52"	"0.00108"	"6/88"	"6"	"88"	"286804.60546875"	"HCD"	"MS2"	"18.77011"	"17.6"	"100.000"	"85.3972"	"29705"	"29705"	"29683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"19.6"	""	"20.3"	""	"33.2"	""	"29.4"	"39.8"	""	"751"	"18"	"35.000"	"28.000"	"0.634760569832046"	"18"	"0.006423"	"0.0802"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVFPENFTER"	"[R].gVFPENFTER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"O08839"	"Myc box-dependent-interacting protein 1 OS=Rattus norvegicus OX=10116 GN=Bin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"712.87335"	"1424.73943"	"1424.73715"	"1.60"	"0.00114"	"6/88"	"6"	"88"	"652267.84765625"	"HCD"	"MS2"	"38.31427"	"46.5"	"100.000"	"85.0884"	"29579"	"29579"	"29561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.8"	""	"55.1"	""	"52.1"	""	"70.7"	"0.2"	"91.8"	"104.9"	""	"758"	"25"	"35.000"	"28.000"	"0.109053399918482"	"20"	"0.002286"	"0.02153"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIDSTLTFR"	"[K].nEIDSTLTFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P21913"	"Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2"	"P21913"	"Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"712.88269"	"1424.75810"	"1424.75827"	"-0.12"	"-0.00009"	"7/102"	"7"	"102"	"270281.683776855"	"HCD"	"MS2"	"4.731686"	"21.8"	"100.000"	"81.4285"	"28101"	"28101"	"28080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"22.5"	""	"23.3"	""	"37.1"	""	"53.2"	"51.2"	""	"853"	"40"	"36.000"	"29.000"	"0.004265"	"18"	"0"	"0.0003872"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIDSTLTFR"	"[K].nEIDSTLTFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P21913"	"Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2"	"P21913"	"Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhb PE=2 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"712.88312"	"1424.75896"	"1424.75827"	"0.48"	"0.00034"	"6/102"	"6"	"102"	"276705.256774902"	"HCD"	"MS2"	"6.35103"	"20.9"	"100.000"	"81.3619"	"28047"	"28047"	"28027"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"20.0"	""	"20.1"	""	"39.5"	""	"47.5"	"58.4"	""	"857"	"27"	"36.000"	"29.000"	"0.0794238300633246"	"16"	"0.0001991"	"0.003018"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDVQGYAAK"	"[R].dDVQGYAAk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"712.89313"	"1424.77898"	"1424.77857"	"0.29"	"0.00021"	"8/76"	"8"	"76"	"828549.064819336"	"HCD"	"MS2"	"25.39672"	"86.9"	"100.000"	"45.9447"	"13712"	"13712"	"13685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.6"	""	"93.5"	""	"95.2"	""	"142.1"	""	"168.9"	"175.7"	""	"844"	"52"	"36.000"	"29.000"	"0.000254866321596833"	"20"	"0"	"3.234E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPGSGEPPK"	"[K].tPPGSGEPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"712.91022"	"1424.81316"	"1424.81495"	"-1.26"	"-0.00090"	"7/84"	"7"	"84"	"485559.685546875"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"35.4105"	"9401"	"9401"	"9383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"25.5"	""	"28.7"	""	"59.5"	"1.4"	"46.4"	"38.5"	""	"710"	"46"	"35.000"	"28.000"	"0.000813258016732559"	"22"	"0.007412"	"0.09465"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGTVVYGGK"	"[K].eGGTVVYGGk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"712.91119"	"1424.81511"	"1424.81495"	"0.11"	"0.00008"	"9/78"	"9"	"78"	"991847.380065918"	"HCD"	"MS2"	"0"	"59.8"	"100.000"	"45.9046"	"13661"	"13661"	"13637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.7"	""	"73.5"	""	"81.1"	""	"92.1"	"1.2"	"104.7"	"120.3"	""	"708"	"54"	"35.000"	"28.000"	"0.000149624689450023"	"26"	"0"	"5.127E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPGSGEPPK"	"[K].tPPGSGEPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"712.91125"	"1424.81523"	"1424.81495"	"0.20"	"0.00014"	"7/84"	"7"	"84"	"336429.19354248"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"35.7271"	"9530"	"9530"	"9504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"19.8"	""	"24.8"	""	"33.1"	""	"35.8"	"34.2"	""	"710"	"48"	"35.000"	"28.000"	"0.000557478795538411"	"22"	"0.004959"	"0.06154"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGTVVYGGK"	"[K].eGGTVVYGGk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"Q64057"	"Alpha-aminoadipic semialdehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh7a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"712.91138"	"1424.81548"	"1424.81495"	"0.37"	"0.00026"	"9/78"	"9"	"78"	"1420103.45758057"	"HCD"	"MS2"	"0"	"122.1"	"100.000"	"45.6365"	"13586"	"13586"	"13560"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.0"	""	"183.0"	""	"170.1"	""	"164.6"	""	"204.3"	"233.0"	""	"708"	"44"	"35.000"	"28.000"	"0.00139959783504117"	"20"	"0"	"6.093E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPPGSGEPPK"	"[K].tPPGSGEPPk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"712.91168"	"1424.81609"	"1424.81495"	"0.80"	"0.00057"	"7/84"	"7"	"84"	"323973.722167969"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"35.0457"	"9292"	"9292"	"9275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"20.6"	""	"21.5"	""	"38.2"	""	"35.9"	"29.2"	""	"711"	"44"	"35.000"	"28.000"	"0.00127890888647866"	"24"	"0.005832"	"0.07142"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIYTVK"	"[K].eVDIYTVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"712.92328"	"1424.83928"	"1424.84010"	"-0.58"	"-0.00041"	"7/66"	"7"	"66"	"406120.652282715"	"HCD"	"MS2"	"0"	"39.6"	"100.000"	"84.5023"	"29343"	"29343"	"29319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.1"	""	"63.0"	""	"55.4"	""	"58.9"	"0.9"	"64.2"	"63.1"	""	"556"	"46"	"34.000"	"27.000"	"0.000631022428823702"	"25"	"0"	"0.000184"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIYTVK"	"[K].eVDIYTVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.4884"	"0.0000"	"1"	"1"	"1"	"712.92346"	"1424.83965"	"1424.84010"	"-0.32"	"-0.00023"	"7/66"	"7"	"66"	"1254455.24468994"	"HCD"	"MS2"	"0"	"109.7"	"100.000"	"84.7086"	"29398"	"29398"	"29389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.9"	""	"165.1"	""	"154.9"	""	"161.2"	"1.4"	"183.3"	"194.8"	""	"556"	"43"	"34.000"	"27.000"	"0.00136472389570423"	""	"9.9E-05"	"0.0005381"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIYTVK"	"[K].eVDIYTVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5581"	"0.0000"	"1"	"1"	"1"	"712.92371"	"1424.84014"	"1424.84010"	"0.02"	"0.00002"	"12/66"	"12"	"66"	"1313373.81121826"	"HCD"	"MS2"	"5.126164"	"107.0"	"100.000"	"84.7679"	"29450"	"29450"	"29445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.1"	""	"151.1"	""	"159.5"	""	"145.1"	""	"185.7"	"195.5"	""	"556"	"43"	"34.000"	"27.000"	"0.00130330120236384"	""	"9.9E-05"	"0.000647"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIYTVK"	"[K].eVDIYTVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"712.92413"	"1424.84099"	"1424.84010"	"0.62"	"0.00044"	"7/66"	"7"	"66"	"799391.579284668"	"HCD"	"MS2"	"43.60001"	"60.0"	"100.000"	"85.0042"	"29515"	"29515"	"29497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.6"	""	"70.9"	""	"75.4"	""	"89.7"	""	"115.9"	"126.2"	""	"545"	"23"	"34.000"	"27.000"	"0.126289285628138"	"24"	"0.0001991"	"0.002253"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIYTVK"	"[K].eVDIYTVk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"712.92462"	"1424.84197"	"1424.84010"	"1.31"	"0.00093"	"12/66"	"12"	"66"	"239692.241821289"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"84.4358"	"29288"	"29288"	"29263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"35.3"	""	"38.1"	""	"31.5"	""	"35.9"	"39.6"	""	"537"	"38"	"34.000"	"27.000"	"0.00461258401951813"	"19"	"9.9E-05"	"0.0009665"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPLPPPPPPR"	"[R].nLPLPPPPPPR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"712.92590"	"1424.84453"	"1424.84630"	"-1.24"	"-0.00089"	"8/102"	"8"	"102"	"132056.574279785"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"88.2716"	"30825"	"30825"	"30802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"10.0"	""	"12.0"	""	"13.3"	""	"14.0"	"14.9"	""	"503"	"16"	"34.000"	"27.000"	"0.691095379505253"	"22"	"0.0001991"	"0.004894"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPLPPPPPPR"	"[R].nLPLPPPPPPR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.62000"	"1424.84543"	"1424.84630"	"-0.61"	"-0.00029"	"8/102"	"8"	"102"	"452601.193664551"	"HCD"	"MS2"	"51.89013"	"8.9"	"100.000"	"88.0191"	"30761"	"30761"	"30739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"11.6"	""	"11.2"	""	"17.5"	""	"15.8"	"16.7"	""	"518"	"10"	"34.000"	"27.000"	"2.64423326280289"	"13"	"0.0001991"	"0.003024"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLPLPPPPPPR"	"[R].nLPLPPPPPPR.[G]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"712.92810"	"1424.84892"	"1424.84630"	"1.84"	"0.00131"	"4/102"	"4"	"102"	"124353.43963623"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"87.9131"	"30718"	"30718"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"11.7"	""	"10.0"	""	"13.4"	""	"13.7"	"13.2"	""	"467"	"19"	"33.000"	"26.000"	"0.315708943505864"	""	"0.0001991"	"0.005158"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEHTLK"	"[R].eLPEHTLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"475.62161"	"1424.85028"	"1424.85134"	"-0.74"	"-0.00035"	"6/66"	"6"	"66"	"15224300.7890015"	"HCD"	"MS2"	"10.78945"	"383.3"	"76.374"	"45.4238"	"13465"	"13465"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"638.7"	""	"495.6"	""	"535.3"	""	"676.5"	"0.5"	"625.4"	"652.9"	""	"459"	"33"	"33.000"	"26.000"	"0.0113444302663479"	"22"	"0.0001686"	"0.001863"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEHTLK"	"[R].eLPEHTLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"475.62256"	"1424.85312"	"1424.85134"	"1.25"	"0.00060"	"10/66"	"10"	"66"	"31517008.4448242"	"HCD"	"MS2"	"4.933992"	"557.9"	"53.057"	"45.1341"	"13347"	"13347"	"13330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"970.9"	""	"743.9"	""	"734.1"	""	"1052.4"	""	"888.1"	"890.5"	""	"438"	"32"	"33.000"	"26.000"	"0.0135034305407665"	"22"	"0.0001991"	"0.003271"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEHTLK"	"[R].eLPEHTLk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"P04276"	"Vitamin D-binding protein OS=Rattus norvegicus OX=10116 GN=Gc PE=1 SV=3"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"475.62286"	"1424.85404"	"1424.85134"	"1.90"	"0.00090"	"12/66"	"12"	"66"	"31739124.1427002"	"HCD"	"MS2"	"5.494586"	"528.1"	"48.586"	"44.8570"	"13268"	"13268"	"13255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"914.9"	""	"711.1"	""	"691.2"	""	"1011.6"	""	"801.6"	"867.8"	""	"438"	"33"	"33.000"	"26.000"	"0.0105303817310491"	"22"	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"475.92200"	"1425.75144"	"1425.75352"	"-1.46"	"-0.00070"	"9/102"	"9"	"102"	"1219298.60559082"	"HCD"	"MS2"	"41.8751"	"38.1"	"100.000"	"51.1752"	"15799"	"15799"	"15773"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"42.2"	""	"50.1"	""	"67.8"	"1.7"	"74.2"	"81.2"	""	"773"	"22"	"35.000"	"28.000"	"0.22916563795017"	"20"	"0.0001686"	"0.001069"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"713.38007"	"1425.75286"	"1425.75352"	"-0.47"	"-0.00033"	"9/102"	"9"	"102"	"623630.975036621"	"HCD"	"MS2"	"7.589109"	"44.6"	"100.000"	"50.6633"	"15624"	"15624"	"15610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"46.8"	""	"56.1"	""	"86.6"	""	"84.7"	"101.5"	""	"792"	"28"	"35.000"	"28.000"	"0.0652672307044102"	"17"	"0"	"0.000284"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"475.92252"	"1425.75299"	"1425.75352"	"-0.37"	"-0.00018"	"8/102"	"8"	"102"	"978005.652832031"	"HCD"	"MS2"	"61.41754"	"38.3"	"100.000"	"50.9301"	"15733"	"15733"	"15702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.1"	""	"45.7"	""	"50.9"	""	"71.2"	""	"78.0"	"77.7"	""	"781"	"18"	"35.000"	"28.000"	"0.657084220848018"	"18"	"0.0001686"	"0.001558"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.6618"	"0.0000"	"1"	"1"	"1"	"713.38092"	"1425.75456"	"1425.75352"	"0.73"	"0.00052"	"9/102"	"9"	"102"	"883633.079223633"	"HCD"	"MS2"	"6.068367"	"58.7"	"100.000"	"51.0214"	"15736"	"15736"	"15717"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.1"	""	"69.5"	""	"62.4"	""	"104.2"	""	"128.0"	"123.3"	""	"780"	"68"	"35.000"	"28.000"	"6.26707088675022E-06"	""	"0"	"2.047E-06"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAVYTGLNTR"	"[K].sDAVYTGLNTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"713.38184"	"1425.75640"	"1425.75352"	"2.01"	"0.00144"	"13/102"	"13"	"102"	"343935.79888916"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"51.0405"	"15778"	"15778"	"15750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"46.0"	""	"36.9"	""	"55.7"	"1.2"	"59.5"	"57.5"	""	"793"	"45"	"35.000"	"28.000"	"0.0013939371466947"	"18"	"9.9E-05"	"0.0006642"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"713.41583"	"1425.82439"	"1425.82629"	"-1.34"	"-0.00095"	"9/94"	"9"	"94"	"700705.417297363"	"HCD"	"MS2"	"45.7109"	"36.8"	"100.000"	"75.7668"	"25778"	"25778"	"25759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.3"	""	"49.9"	""	"50.9"	""	"52.4"	"0.3"	"68.5"	"75.8"	""	"666"	"29"	"35.000"	"28.000"	"0.0451278074312895"	"25"	"0.0001991"	"0.004933"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"475.94650"	"1425.82495"	"1425.82629"	"-0.94"	"-0.00045"	"13/94"	"13"	"94"	"1265996.78009033"	"HCD"	"MS2"	"36.85149"	"34.7"	"100.000"	"76.1435"	"25963"	"25963"	"25943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.9"	""	"39.6"	""	"51.2"	""	"55.7"	"0.1"	"65.1"	"76.9"	""	"660"	"28"	"35.000"	"28.000"	"0.0476995124346156"	"18"	"0"	"0.0001439"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSPIEPVQR"	"[R].aLSSPIEPVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"713.41620"	"1425.82512"	"1425.82629"	"-0.82"	"-0.00059"	"10/90"	"10"	"90"	"2806622.918396"	"HCD"	"MS2"	"0"	"115.6"	"100.000"	"62.3766"	"20378"	"20378"	"20361"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.2"	""	"139.4"	""	"140.5"	""	"193.6"	""	"247.3"	"225.4"	""	"667"	"46"	"35.000"	"28.000"	"0.00092277503874474"	"19"	"0"	"4.435E-06"	"0.932"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSPIEPVQR"	"[R].aLSSPIEPVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"713.41626"	"1425.82524"	"1425.82629"	"-0.74"	"-0.00053"	"11/90"	"11"	"90"	"1624255.03259277"	"HCD"	"MS2"	"46.95569"	"98.8"	"100.000"	"62.0992"	"20231"	"20231"	"20215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"146.5"	""	"127.4"	""	"116.5"	""	"171.3"	""	"194.3"	"181.2"	""	"667"	"31"	"35.000"	"28.000"	"0.0247226965473856"	"20"	"0"	"1.956E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSPIEPVQR"	"[R].aLSSPIEPVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"475.94672"	"1425.82560"	"1425.82629"	"-0.49"	"-0.00023"	"12/90"	"12"	"90"	"2083055.31060791"	"HCD"	"MS2"	"44.25374"	"38.6"	"100.000"	"62.2796"	"20338"	"20338"	"20313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.4"	""	"44.2"	""	"52.6"	""	"66.8"	""	"75.6"	"76.1"	""	"678"	"37"	"35.000"	"28.000"	"0.00612632028717704"	"20"	"9.9E-05"	"0.001006"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.94681"	"1425.82587"	"1425.82629"	"-0.30"	"-0.00014"	"13/94"	"13"	"94"	"984386.057861328"	"HCD"	"MS2"	"36.30267"	"30.4"	"100.000"	"75.8775"	"25823"	"25823"	"25801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"35.3"	""	"42.0"	""	"56.0"	""	"57.7"	"67.8"	""	"655"	"27"	"35.000"	"28.000"	"0.0721458416650007"	"14"	"0"	"9.881E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"713.41681"	"1425.82634"	"1425.82629"	"0.03"	"0.00002"	"9/94"	"9"	"94"	"1116334.72473145"	"HCD"	"MS2"	"11.81227"	"49.0"	"100.000"	"76.0991"	"25913"	"25913"	"25893"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.7"	""	"66.0"	""	"56.7"	""	"67.1"	"0.4"	"95.9"	"113.1"	""	"655"	"41"	"35.000"	"28.000"	"0.00248434155822058"	"25"	"0.0001991"	"0.002648"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"713.41687"	"1425.82646"	"1425.82629"	"0.12"	"0.00008"	"12/94"	"12"	"94"	"783929.943603516"	"HCD"	"MS2"	"38.63154"	"37.9"	"100.000"	"75.9177"	"25871"	"25871"	"25849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.6"	""	"53.2"	""	"51.6"	""	"55.8"	"1.2"	"72.3"	"80.0"	""	"655"	"40"	"35.000"	"28.000"	"0.00333588679587723"	"26"	"0.0001686"	"0.001037"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIPASDLPQVR"	"[K].tIPASDLPQVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"713.41687"	"1425.82646"	"1425.82629"	"0.12"	"0.00008"	"9/94"	"9"	"94"	"1151308.94573975"	"HCD"	"MS2"	"7.929177"	"50.9"	"100.000"	"76.2081"	"25990"	"25990"	"25973"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"70.9"	""	"74.2"	""	"71.7"	"1.4"	"108.5"	"102.1"	""	"655"	"42"	"35.000"	"28.000"	"0.00208550533097343"	"27"	"9.9E-05"	"0.0004078"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSPIEPVQR"	"[R].aLSSPIEPVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"713.41693"	"1425.82659"	"1425.82629"	"0.20"	"0.00015"	"9/90"	"9"	"90"	"2148468.35437012"	"HCD"	"MS2"	"40.05893"	"115.4"	"100.000"	"62.0883"	"20260"	"20260"	"20239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.6"	""	"130.2"	""	"153.0"	""	"198.4"	""	"236.3"	"226.3"	""	"655"	"29"	"35.000"	"28.000"	"0.0378626759317913"	"17"	"0"	"1.957E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSPIEPVQR"	"[R].aLSSPIEPVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"713.41711"	"1425.82695"	"1425.82629"	"0.46"	"0.00033"	"10/90"	"10"	"90"	"3119642.38574219"	"HCD"	"MS2"	"4.184141"	"132.1"	"100.000"	"62.3896"	"20350"	"20350"	"20333"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.1"	""	"135.8"	""	"168.9"	""	"238.5"	""	"277.2"	"246.6"	""	"655"	"42"	"35.000"	"28.000"	"0.00223981064484668"	"18"	"0"	"1.036E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSSPIEPVQR"	"[R].aLSSPIEPVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.94727"	"1425.82724"	"1425.82629"	"0.67"	"0.00032"	"13/90"	"13"	"90"	"2139031.97900391"	"HCD"	"MS2"	"49.79749"	"33.7"	"100.000"	"62.4403"	"20370"	"20370"	"20349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.5"	""	"35.6"	""	"51.9"	""	"67.9"	""	"67.7"	"59.5"	""	"654"	"36"	"35.000"	"28.000"	"0.00827080444837889"	"15"	"9.9E-05"	"0.0007945"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEYLSNADER"	"[R].tEYLSNADER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"713.85364"	"1426.70000"	"1426.70115"	"-0.81"	"-0.00058"	"9/96"	"9"	"96"	"600689.333862305"	"HCD"	"MS2"	"18.83951"	"43.2"	"100.000"	"41.7288"	"11959"	"11959"	"11938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"60.9"	""	"62.1"	""	"53.5"	""	"80.8"	"78.4"	""	"519"	"44"	"34.000"	"27.000"	"0.00106447964725024"	"27"	"0"	"1.89E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEYLSNADER"	"[R].tEYLSNADER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"713.85394"	"1426.70061"	"1426.70115"	"-0.38"	"-0.00027"	"8/96"	"8"	"96"	"483361.238525391"	"HCD"	"MS2"	"100"	"40.9"	"100.000"	"41.5448"	"11919"	"11919"	"11894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.9"	""	"52.6"	""	"59.1"	""	"61.0"	""	"76.7"	"73.5"	""	"516"	"22"	"34.000"	"27.000"	"0.171245712163692"	"23"	"0.0001991"	"0.00374"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"713.88617"	"1426.76506"	"1426.76522"	"-0.11"	"-0.00008"	"7/62"	"7"	"62"	"566674.966918945"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"73.0096"	"24688"	"24688"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"85.6"	""	"72.4"	""	"68.5"	""	"113.1"	"112.8"	""	"740"	"42"	"35.000"	"28.000"	"0.00208545932655603"	"28"	"9.9E-05"	"0.0009922"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"713.88635"	"1426.76543"	"1426.76522"	"0.14"	"0.00010"	"7/62"	"7"	"62"	"675398.452087402"	"HCD"	"MS2"	"0"	"64.5"	"100.000"	"72.9346"	"24628"	"24628"	"24602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.1"	""	"83.5"	""	"88.8"	""	"75.7"	""	"130.6"	"130.8"	""	"739"	"42"	"35.000"	"28.000"	"0.00253871788585259"	""	"9.9E-05"	"0.0004506"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"713.88635"	"1426.76543"	"1426.76522"	"0.14"	"0.00010"	"7/62"	"7"	"62"	"923146.82043457"	"HCD"	"MS2"	"9.354959"	"90.1"	"100.000"	"73.3026"	"24807"	"24807"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.5"	""	"123.1"	""	"122.4"	""	"98.1"	""	"180.1"	"197.2"	""	"739"	"41"	"35.000"	"28.000"	"0.00287484505609207"	"26"	"9.9E-05"	"0.0007151"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEEVMFK"	"[R].eGEEVMFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"713.88641"	"1426.76555"	"1426.76522"	"0.23"	"0.00016"	"7/62"	"7"	"62"	"828468.8984375"	"HCD"	"MS2"	"14.74823"	"81.9"	"100.000"	"73.2347"	"24750"	"24750"	"24730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.1"	""	"107.1"	""	"110.7"	""	"97.2"	""	"166.0"	"174.9"	""	"744"	"39"	"35.000"	"28.000"	"0.00472653567137577"	"26"	"0.0001686"	"0.001719"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"713.89404"	"1426.78081"	"1426.78298"	"-1.52"	"-0.00109"	"7/68"	"7"	"68"	"310485.658935547"	"HCD"	"MS2"	"30.87193"	"30.2"	"100.000"	"76.6369"	"26164"	"26164"	"26137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"49.5"	""	"38.6"	""	"46.9"	""	"49.2"	"48.3"	""	"682"	"46"	"35.000"	"28.000"	"0.00082938156709417"	"27"	"0"	"0.0001929"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"713.89502"	"1426.78276"	"1426.78298"	"-0.15"	"-0.00011"	"12/68"	"12"	"68"	"321207.832885742"	"HCD"	"MS2"	"19.32713"	"31.5"	"100.000"	"76.5922"	"26114"	"26114"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"45.3"	""	"45.3"	""	"51.7"	""	"48.7"	"50.6"	""	"687"	"41"	"35.000"	"28.000"	"0.00278565123372795"	"23"	"0"	"0.0001167"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELFTDTK"	"[R].dELFTDTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"P18886"	"Carnitine O-palmitoyltransferase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cpt2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"713.89526"	"1426.78325"	"1426.78298"	"0.19"	"0.00013"	"7/68"	"7"	"68"	"508208.247253418"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"76.9541"	"26292"	"26292"	"26272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.4"	""	"70.1"	""	"65.4"	""	"70.1"	""	"84.9"	"81.7"	""	"679"	"45"	"35.000"	"28.000"	"0.00106130394513858"	"28"	"9.9E-05"	"0.0004754"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEDLHVK"	"[K].lDEDLHVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"476.28110"	"1426.82874"	"1426.83060"	"-1.30"	"-0.00062"	"7/60"	"7"	"60"	"1041669.18554688"	"HCD"	"MS2"	"29.66207"	"45.4"	"100.000"	"63.3924"	"20790"	"20790"	"20766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"45.9"	""	"49.1"	""	"79.9"	"0.1"	"102.1"	"101.6"	""	"597"	"24"	"34.000"	"27.000"	"0.128808444433088"	"20"	"0.002035"	"0.01768"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAADEPKPK"	"[M].aAADEPkPk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"713.91821"	"1426.82915"	"1426.83060"	"-1.02"	"-0.00073"	"9/70"	"9"	"70"	"290429.756652832"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"36.8305"	"9975"	"9975"	"9949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"35.2"	""	"31.1"	""	"39.3"	""	"40.1"	"42.0"	""	"583"	"16"	"34.000"	"27.000"	"0.677077776138097"	"20"	"0.009411"	"0.1243"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAADEPKPK"	"[M].aAADEPkPk.[K]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"713.91858"	"1426.82988"	"1426.83060"	"-0.50"	"-0.00036"	"9/70"	"9"	"70"	"1095662.45953369"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"36.4451"	"9856"	"9856"	"9836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.3"	""	"114.2"	""	"109.0"	""	"118.0"	""	"129.0"	"135.0"	""	"581"	"24"	"34.000"	"27.000"	"0.110191003134855"	"22"	"0.002711"	"0.0286"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEDLHVK"	"[K].lDEDLHVk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"476.28156"	"1426.83011"	"1426.83060"	"-0.34"	"-0.00016"	"7/60"	"7"	"60"	"1053888.86322021"	"HCD"	"MS2"	"31.44102"	"47.0"	"100.000"	"63.3915"	"20758"	"20758"	"20731"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.2"	""	"46.4"	""	"51.1"	""	"84.1"	""	"104.6"	"104.5"	""	"563"	"24"	"34.000"	"27.000"	"0.117348731446899"	"20"	"0.0005778"	"0.007166"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQNSLALHK"	"[K].gQnSLALHk.[V]"	"N-Term(TMT6plex); N3(Deamidated); K9(TMT6plex)"	"1"	"1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"P63322"	"Ras-related protein Ral-A OS=Rattus norvegicus OX=10116 GN=Rala PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"476.28497"	"1426.84037"	"1426.84183"	"-1.03"	"-0.00049"	"6/78"	"6"	"78"	"1058646.25457764"	"HCD"	"MS2"	"23.55639"	"59.3"	"100.000"	"43.2033"	"12561"	"12561"	"12530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.2"	""	"64.7"	""	"80.1"	""	"101.7"	""	"122.1"	"126.2"	""	"543"	"30"	"34.000"	"27.000"	"0.0264709686640271"	"26"	"0"	"0.0002228"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDAEAPPEK"	"[K].iDAEAPPEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"P41682"	"Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus OX=10116 GN=Adh7 PE=1 SV=2"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"714.41162"	"1427.81597"	"1427.81462"	"0.95"	"0.00067"	"9/76"	"9"	"76"	"261238.08996582"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"52.9311"	"16544"	"16544"	"16514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	"1.9"	"17.0"	""	"20.9"	""	"39.2"	""	"28.7"	"37.6"	""	"695"	"12"	"35.000"	"28.000"	"2.3711269621423"	"20"	"0.00307"	"0.03326"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPPVSELITK"	"[K].ASGPPVSELITk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"714.41937"	"1427.83147"	"1427.83071"	"0.53"	"0.00038"	"7/106"	"7"	"106"	"147090.28527832"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"80.0248"	"27532"	"27532"	"27509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"14.6"	""	"20.7"	""	"17.9"	""	"23.0"	"19.2"	""	"646"	"60"	"35.000"	"28.000"	"3.36668529694037E-05"	"24"	"9.9E-05"	"0.000426"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPPVSELITK"	"[K].ASGPPVSELITk.[A]"	"K12(TMT6plex)"	"1"	"1"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"714.42047"	"1427.83367"	"1427.83071"	"2.07"	"0.00148"	"7/106"	"7"	"106"	"136397.907043457"	"HCD"	"MS2"	"25.65766"	"9.6"	"100.000"	"79.9908"	"27491"	"27491"	"27462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"12.1"	""	"12.5"	""	"18.5"	""	"16.0"	"20.8"	""	"624"	"56"	"34.000"	"27.000"	"8.35900517343538E-05"	"23"	"0.0001991"	"0.003467"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"476.61844"	"1427.84076"	"1427.84194"	"-0.83"	"-0.00039"	"13/114"	"13"	"114"	"1104840.48205566"	"HCD"	"MS2"	"16.20696"	"19.7"	"100.000"	"66.0299"	"21830"	"21830"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"23.7"	""	"20.2"	""	"47.4"	""	"36.4"	"37.2"	""	"609"	"44"	"34.000"	"27.000"	"0.00134458201219084"	"23"	"0"	"9.473E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"714.42407"	"1427.84087"	"1427.84194"	"-0.75"	"-0.00054"	"8/114"	"8"	"114"	"981841.711608887"	"HCD"	"MS2"	"0"	"43.8"	"100.000"	"65.7143"	"21701"	"21701"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"66.8"	""	"65.4"	""	"64.8"	"0.1"	"75.6"	"81.0"	""	"609"	"64"	"34.000"	"27.000"	"1.31397558894055E-05"	"25"	"0"	"2.103E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"476.61880"	"1427.84186"	"1427.84194"	"-0.06"	"-0.00003"	"13/114"	"13"	"114"	"1052830.3112793"	"HCD"	"MS2"	"18.34913"	"17.8"	"100.000"	"65.9367"	"21825"	"21825"	"21798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.0"	""	"19.5"	""	"17.6"	""	"41.6"	""	"40.0"	"36.5"	""	"603"	"42"	"34.000"	"27.000"	"0.00180421095910687"	"23"	"0"	"1.823E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"714.42462"	"1427.84197"	"1427.84194"	"0.02"	"0.00001"	"8/114"	"8"	"114"	"2820577.05932617"	"HCD"	"MS2"	"0"	"110.2"	"100.000"	"65.9993"	"21850"	"21850"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.1"	""	"156.9"	""	"166.4"	""	"171.7"	"2.3"	"178.6"	"200.7"	""	"603"	"66"	"34.000"	"27.000"	"7.10047359094646E-06"	"24"	"0"	"2.048E-06"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQALVLAPTR"	"[K].eTQALVLAPTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8030"	"0.0000"	"1"	"1"	"1"	"714.42474"	"1427.84221"	"1427.84194"	"0.19"	"0.00013"	"8/114"	"8"	"114"	"2584301.1427002"	"HCD"	"MS2"	"0"	"101.5"	"100.000"	"66.0046"	"21819"	"21819"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.7"	""	"152.1"	""	"145.2"	""	"157.2"	""	"171.7"	"191.3"	""	"603"	"66"	"34.000"	"27.000"	"7.16617346417401E-06"	""	"0"	"2.091E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAQGQLLK"	"[K].dPAQGQLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"714.43427"	"1427.86125"	"1427.86224"	"-0.69"	"-0.00049"	"13/74"	"13"	"74"	"663686.260803223"	"HCD"	"MS2"	"46.30285"	"48.1"	"100.000"	"61.1713"	"19859"	"19859"	"19834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.6"	""	"48.0"	""	"57.2"	""	"55.7"	""	"101.4"	"103.0"	""	"459"	"32"	"33.000"	"26.000"	"0.0160613738082522"	"25"	"0"	"0.0003131"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAQGQLLK"	"[K].dPAQGQLLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"714.43463"	"1427.86199"	"1427.86224"	"-0.17"	"-0.00012"	"8/74"	"8"	"74"	"905798.513122559"	"HCD"	"MS2"	"44.88179"	"64.5"	"100.000"	"61.0402"	"19837"	"19837"	"19816"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.7"	""	"66.3"	""	"71.5"	""	"88.5"	""	"129.2"	"130.5"	""	"433"	"42"	"33.000"	"26.000"	"0.0013015411416513"	"23"	"0"	"4.754E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNYDPFR"	"[R].vDSSNYDPFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.85052"	"1428.69377"	"1428.69567"	"-1.33"	"-0.00095"	"7/92"	"7"	"92"	"475761.152587891"	"HCD"	"MS2"	"28.24048"	"24.3"	"100.000"	"79.3335"	"27250"	"27250"	"27228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"29.2"	""	"36.1"	""	"35.5"	""	"46.4"	"48.8"	""	"425"	"24"	"33.000"	"26.000"	"0.0793156585315907"	"14"	"0.0001991"	"0.002385"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNYDPFR"	"[R].vDSSNYDPFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"P24135"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 OS=Rattus norvegicus OX=10116 GN=Plcg2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.85114"	"1428.69499"	"1428.69567"	"-0.48"	"-0.00034"	"7/92"	"7"	"92"	"506757.555664063"	"HCD"	"MS2"	"22.73329"	"26.2"	"100.000"	"79.2968"	"27208"	"27208"	"27185"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"41.3"	""	"42.2"	""	"36.7"	""	"50.4"	"48.3"	""	"447"	"23"	"33.000"	"26.000"	"0.124818088523682"	"14"	"0.0001991"	"0.002619"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSNAMEYK"	"[K].qSNAMEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"714.88123"	"1428.75517"	"1428.75572"	"-0.38"	"-0.00027"	"12/78"	"12"	"78"	"974730.828857422"	"HCD"	"MS2"	"27.50694"	"95.5"	"100.000"	"40.9673"	"11655"	"11655"	"11626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.8"	""	"108.4"	""	"109.2"	""	"108.1"	""	"215.4"	"227.0"	""	"678"	"35"	"35.000"	"28.000"	"0.0109951130281429"	"18"	"9.9E-05"	"0.000828"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSNAMEYK"	"[K].qSNAMEYk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"714.88184"	"1428.75640"	"1428.75572"	"0.47"	"0.00034"	"7/78"	"7"	"78"	"1177223.90789795"	"HCD"	"MS2"	"52.48929"	"113.0"	"100.000"	"40.7616"	"11606"	"11606"	"11579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.0"	""	"112.6"	""	"138.5"	""	"146.4"	""	"263.9"	"252.4"	""	"686"	"30"	"35.000"	"28.000"	"0.0330593355103022"	"16"	"0.0001686"	"0.001517"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGTPELSPTER"	"[R].lGTPELSPTER.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"714.89783"	"1428.78838"	"1428.78957"	"-0.84"	"-0.00060"	"6/94"	"6"	"94"	"469638.560424805"	"HCD"	"MS2"	"18.53927"	"34.6"	"100.000"	"63.3486"	"20772"	"20772"	"20750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.6"	""	"36.9"	""	"40.8"	""	"68.7"	"0.4"	"64.6"	"73.3"	""	"788"	"19"	"35.000"	"28.000"	"0.47697566461889"	"24"	"0.004959"	"0.0624"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEERPSLR"	"[R].aLEEERPSLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"476.93768"	"1428.79850"	"1428.80081"	"-1.62"	"-0.00077"	"5/90"	"5"	"90"	"2258874.44793701"	"HCD"	"MS2"	"41.58863"	"117.2"	"100.000"	"38.3028"	"10610"	"10610"	"10581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"143.6"	""	"121.6"	""	"125.8"	""	"243.6"	""	"233.0"	"247.3"	""	"772"	"5"	"35.000"	"28.000"	"12.0944828958582"	"13"	"0.0001991"	"0.004932"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEHEMK"	"[K].aLIEHEMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"476.94751"	"1428.82798"	"1428.82849"	"-0.36"	"-0.00017"	"11/60"	"11"	"60"	"2204644.08673096"	"HCD"	"MS2"	"21.94505"	"103.1"	"100.000"	"48.9864"	"14907"	"14907"	"14887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.9"	""	"141.3"	""	"149.2"	""	"139.2"	""	"193.5"	"199.4"	""	"709"	"35"	"35.000"	"28.000"	"0.0125781346483302"	"26"	"0.0001686"	"0.001335"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEHEMK"	"[K].aLIEHEMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"3"	"3"	"0.6216"	"0.0000"	"1"	"1"	"1"	"476.94757"	"1428.82816"	"1428.82849"	"-0.23"	"-0.00011"	"11/60"	"11"	"60"	"3670519.61315918"	"HCD"	"MS2"	"32.52417"	"170.5"	"100.000"	"48.6807"	"14783"	"14783"	"14756"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"265.8"	""	"257.0"	""	"253.3"	""	"201.7"	"1.7"	"308.5"	"326.4"	""	"705"	"37"	"35.000"	"28.000"	"0.00758855561490341"	""	"0.0001686"	"0.001578"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALIEHEMK"	"[K].aLIEHEMk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"476.94772"	"1428.82862"	"1428.82849"	"0.09"	"0.00004"	"10/60"	"10"	"60"	"2998896.83355713"	"HCD"	"MS2"	"10.23187"	"142.5"	"100.000"	"48.3620"	"14689"	"14689"	"14673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.4"	""	"209.8"	""	"203.9"	""	"175.4"	"0.2"	"264.6"	"268.1"	""	"699"	"20"	"35.000"	"28.000"	"0.356818349555834"	"22"	"0.001872"	"0.01571"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVKR"	"[M].aGLNSLEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"1"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"714.92157"	"1428.83586"	"1428.83719"	"-0.93"	"-0.00067"	"6/98"	"6"	"98"	"683954.134094238"	"HCD"	"MS2"	"20.87538"	"37.4"	"100.000"	"82.5077"	"28508"	"28508"	"28492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.8"	""	"54.9"	""	"66.5"	""	"54.5"	"1.1"	"45.6"	"57.3"	""	"672"	"39"	"35.000"	"28.000"	"0.00437864037559972"	"16"	"0"	"0.0001053"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVLR"	"[K].dAGTIAGLNVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"714.92200"	"1428.83672"	"1428.83719"	"-0.33"	"-0.00024"	"6/100"	"6"	"100"	"174525.221008301"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"98.9868"	"35183"	"35183"	"35162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"12.6"	""	"15.5"	""	"18.6"	""	"18.8"	"22.5"	""	"673"	"40"	"35.000"	"28.000"	"0.00359736966858424"	""	"0"	"0.0002964"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVLR"	"[K].dAGTIAGLNVLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"714.92218"	"1428.83708"	"1428.83719"	"-0.08"	"-0.00005"	"6/100"	"6"	"100"	"176641.241760254"	"HCD"	"MS2"	"35.56794"	"11.6"	"100.000"	"98.9283"	"35130"	"35130"	"35103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"20.0"	""	"14.3"	""	"20.0"	""	"25.0"	"17.6"	""	"666"	"25"	"35.000"	"28.000"	"0.117609995540722"	"22"	"0.002525"	"0.02486"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVKR"	"[M].aGLNSLEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"1"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"714.92242"	"1428.83757"	"1428.83719"	"0.26"	"0.00019"	"13/98"	"13"	"98"	"414078.377807617"	"HCD"	"MS2"	"19.92945"	"23.4"	"100.000"	"82.6692"	"28602"	"28602"	"28585"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"32.7"	""	"36.5"	""	"40.8"	""	"30.4"	"40.3"	""	"662"	"29"	"35.000"	"28.000"	"0.039248945564333"	"18"	"0.0001991"	"0.002388"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVKR"	"[M].aGLNSLEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"1"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"714.92261"	"1428.83794"	"1428.83719"	"0.52"	"0.00037"	"7/98"	"7"	"98"	"489182.321228027"	"HCD"	"MS2"	"31.15417"	"27.4"	"100.000"	"82.2061"	"28389"	"28389"	"28368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.2"	""	"38.4"	""	"44.7"	""	"49.0"	""	"37.7"	"40.7"	""	"664"	"24"	"35.000"	"28.000"	"0.134319196043551"	"16"	"0.001488"	"0.01254"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLNSLEAVKR"	"[M].aGLNSLEAVkR.[K]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"1"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"714.92261"	"1428.83794"	"1428.83719"	"0.52"	"0.00037"	"21/98"	"21"	"98"	"744521.60369873"	"HCD"	"MS2"	"15.79385"	"37.4"	"100.000"	"82.3583"	"28479"	"28479"	"28458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.4"	""	"54.8"	""	"64.9"	""	"63.1"	"0.7"	"38.9"	"58.1"	""	"664"	"26"	"35.000"	"28.000"	"0.0785485339565272"	"17"	"9.9E-05"	"0.0008523"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"476.96555"	"1428.88208"	"1428.88264"	"-0.39"	"-0.00018"	"6/74"	"6"	"74"	"688721.082702637"	"HCD"	"MS2"	"35.97556"	"27.0"	"100.000"	"74.3863"	"25219"	"25219"	"25199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"33.2"	""	"37.6"	""	"47.7"	""	"50.6"	"57.8"	""	"395"	"24"	"32.000"	"25.000"	"0.0707240463277705"	"20"	"9.9E-05"	"0.0005832"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"714.94470"	"1428.88213"	"1428.88264"	"-0.36"	"-0.00025"	"6/74"	"6"	"74"	"506114.77520752"	"HCD"	"MS2"	"43.42397"	"41.6"	"100.000"	"74.5500"	"25285"	"25285"	"25262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.2"	""	"45.8"	""	"50.0"	""	"90.8"	""	"87.4"	"79.3"	""	"395"	"20"	"32.000"	"25.000"	"0.209684872546748"	"19"	"0.0001686"	"0.001243"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"714.94495"	"1428.88262"	"1428.88264"	"-0.01"	"-0.00001"	"4/74"	"4"	"74"	"288210.576171875"	"HCD"	"MS2"	"47.96595"	"25.0"	"100.000"	"74.2505"	"25164"	"25164"	"25142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.3"	""	"34.5"	""	"32.9"	""	"54.0"	"0.3"	"43.6"	"45.5"	""	"395"	"19"	"32.000"	"25.000"	"0.261557453200946"	"20"	"0.0001686"	"0.001407"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"476.96579"	"1428.88282"	"1428.88264"	"0.13"	"0.00006"	"6/74"	"6"	"74"	"685969.425231934"	"HCD"	"MS2"	"32.90626"	"26.1"	"100.000"	"74.5465"	"25314"	"25314"	"25290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"34.3"	""	"31.7"	""	"45.8"	"0.9"	"51.0"	"50.8"	""	"395"	"29"	"32.000"	"25.000"	"0.0275148468581697"	"24"	"0.0001686"	"0.001594"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDSQILPK"	"[K].aVDSQILPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"P21533"	"60S ribosomal protein L6 OS=Rattus norvegicus OX=10116 GN=Rpl6 PE=1 SV=5"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"714.94543"	"1428.88359"	"1428.88264"	"0.67"	"0.00048"	"6/74"	"6"	"74"	"443147.306762695"	"HCD"	"MS2"	"49.72378"	"37.1"	"100.000"	"74.4773"	"25286"	"25286"	"25261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"48.6"	""	"41.6"	""	"85.2"	""	"79.7"	"60.3"	""	"392"	"17"	"32.000"	"25.000"	"0.356661368287556"	"19"	"0.0001991"	"0.002178"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALLMAEMSR"	"[R].mALLmAEmSR.[L]"	"N-Term(TMT6plex); M1(Oxidation); M5(Oxidation); M8(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.35596"	"1429.70464"	"1429.70506"	"-0.30"	"-0.00021"	"8/76"	"8"	"76"	"799983.125793457"	"HCD"	"MS2"	"51.01523"	"42.5"	"100.000"	"45.9874"	"13695"	"13695"	"13669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"36.8"	""	"32.8"	""	"91.3"	""	"65.0"	"151.2"	""	"459"	"12"	"33.000"	"26.000"	"1.3607636199111"	"13"	"0.004634"	"0.05438"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MALLMAEMSR"	"[R].mALLmAEmSR.[L]"	"N-Term(TMT6plex); M1(Oxidation); M5(Oxidation); M8(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.35620"	"1429.70513"	"1429.70506"	"0.05"	"0.00003"	"8/76"	"8"	"76"	"906731.341674805"	"HCD"	"MS2"	"38.9559"	"43.6"	"100.000"	"45.7170"	"13619"	"13619"	"13592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"32.2"	""	"27.1"	""	"102.7"	""	"81.4"	"141.6"	""	"452"	"12"	"33.000"	"26.000"	"1.34929974767947"	"13"	"0.005871"	"0.07249"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYLDTLYR"	"[R].qEYLDTLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"715.37958"	"1429.75188"	"1429.75246"	"-0.41"	"-0.00029"	"7/88"	"7"	"88"	"409865.631164551"	"HCD"	"MS2"	"19.49368"	"26.6"	"100.000"	"86.5576"	"30138"	"30138"	"30127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.4"	""	"24.6"	""	"36.9"	""	"42.2"	""	"56.9"	"56.2"	""	"695"	"37"	"35.000"	"28.000"	"0.0074465448388922"	"23"	"0"	"0.000197"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYLDTLYR"	"[R].qEYLDTLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"715.37976"	"1429.75224"	"1429.75246"	"-0.15"	"-0.00011"	"7/88"	"7"	"88"	"878006.14263916"	"HCD"	"MS2"	"45.13102"	"49.7"	"100.000"	"86.8344"	"30248"	"30248"	"30234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	""	"54.9"	""	"62.6"	""	"82.4"	"0.8"	"98.5"	"112.7"	""	"692"	"23"	"35.000"	"28.000"	"0.185813001544108"	"19"	"0.0001991"	"0.002139"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYLDTLYR"	"[R].qEYLDTLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"715.37988"	"1429.75249"	"1429.75246"	"0.02"	"0.00001"	"7/88"	"7"	"88"	"863886.942993164"	"HCD"	"MS2"	"45.72814"	"48.3"	"100.000"	"86.8245"	"30278"	"30278"	"30261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.6"	""	"47.2"	""	"64.7"	""	"83.7"	"0.4"	"96.3"	"108.0"	""	"695"	"28"	"35.000"	"28.000"	"0.0529608331944558"	"20"	"9.9E-05"	"0.0008534"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEYLDTLYR"	"[R].qEYLDTLYR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"715.38025"	"1429.75322"	"1429.75246"	"0.53"	"0.00038"	"7/88"	"7"	"88"	"397045.319274902"	"HCD"	"MS2"	"15.53558"	"27.7"	"100.000"	"86.5199"	"30156"	"30156"	"30142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.4"	""	"31.2"	""	"30.5"	""	"51.0"	"1.8"	"56.4"	"49.9"	""	"693"	"35"	"35.000"	"28.000"	"0.0112902416897196"	"23"	"9.9E-05"	"0.0005196"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGENVK"	"[K].dFYGENVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6410"	"0.0000"	"1"	"1"	"1"	"715.38934"	"1429.77141"	"1429.77275"	"-0.94"	"-0.00067"	"7/68"	"7"	"68"	"1302837.6618042"	"HCD"	"MS2"	"20.84282"	"115.8"	"100.000"	"64.8409"	"21378"	"21378"	"21362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"177.5"	""	"159.6"	""	"152.5"	""	"221.2"	"1.3"	"191.1"	"192.2"	""	"760"	"39"	"35.000"	"28.000"	"0.005233395981797"	""	"0.0001686"	"0.001567"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGENVK"	"[K].dFYGENVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"477.26202"	"1429.77152"	"1429.77275"	"-0.86"	"-0.00041"	"5/68"	"5"	"68"	"1207672.72650146"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"65.0236"	"21419"	"21419"	"21394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.8"	""	"64.3"	""	"69.3"	""	"70.1"	""	"82.0"	"83.3"	""	"785"	"34"	"35.000"	"28.000"	"0.0172917783926322"	"21"	"0.002286"	"0.02176"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGENVK"	"[K].dFYGENVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"715.38977"	"1429.77226"	"1429.77275"	"-0.34"	"-0.00024"	"7/68"	"7"	"68"	"2458896.92297363"	"HCD"	"MS2"	"21.75553"	"179.6"	"100.000"	"65.1259"	"21494"	"21494"	"21477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"268.5"	""	"243.2"	""	"236.2"	""	"306.5"	"1.0"	"328.5"	"317.0"	""	"763"	"24"	"35.000"	"28.000"	"0.136613790754656"	"18"	"0.0001991"	"0.005417"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGENVK"	"[K].dFYGENVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"477.26230"	"1429.77234"	"1429.77275"	"-0.29"	"-0.00014"	"5/68"	"5"	"68"	"1262874.86486816"	"HCD"	"MS2"	"10.56092"	"47.1"	"100.000"	"64.9972"	"21442"	"21442"	"21418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"62.6"	""	"65.5"	""	"70.6"	""	"82.7"	"88.4"	""	"784"	"29"	"35.000"	"28.000"	"0.0522740401408023"	"19"	"0.002035"	"0.01766"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGENVK"	"[K].dFYGENVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"715.38983"	"1429.77239"	"1429.77275"	"-0.26"	"-0.00018"	"7/68"	"7"	"68"	"1348744.9440918"	"HCD"	"MS2"	"31.72437"	"121.6"	"100.000"	"64.8696"	"21356"	"21356"	"21339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.3"	""	"169.0"	""	"168.3"	""	"215.2"	"1.4"	"209.7"	"204.2"	""	"784"	"38"	"35.000"	"28.000"	"0.00656577607402363"	"27"	"0.0001686"	"0.001285"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYGENVK"	"[K].dFYGENVk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"715.39001"	"1429.77275"	"1429.77275"	"0.00"	"0.00000"	"7/68"	"7"	"68"	"2498722.88592529"	"HCD"	"MS2"	"28.98112"	"166.9"	"100.000"	"65.1666"	"21477"	"21477"	"21457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.3"	""	"237.3"	""	"230.7"	""	"283.2"	""	"293.7"	"321.0"	""	"779"	"22"	"35.000"	"28.000"	"0.230413256511347"	"17"	"0.0001991"	"0.00491"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEEANDLLR"	"[K].qLEEANDLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"715.39630"	"1429.78533"	"1429.78482"	"0.35"	"0.00025"	"6/98"	"6"	"98"	"232170.913024902"	"HCD"	"MS2"	"19.27521"	"18.5"	"100.000"	"78.6028"	"26926"	"26926"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"24.7"	""	"24.3"	""	"28.4"	""	"40.3"	"30.3"	""	"770"	"29"	"35.000"	"28.000"	"0.0541328296790017"	"20"	"0.0001991"	"0.002185"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEEANDLLR"	"[K].qLEEANDLLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"715.39636"	"1429.78545"	"1429.78482"	"0.44"	"0.00031"	"7/98"	"7"	"98"	"317530.243286133"	"HCD"	"MS2"	"11.85665"	"22.0"	"100.000"	"78.8563"	"27056"	"27056"	"27031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"30.1"	""	"26.7"	""	"34.3"	""	"44.9"	"41.9"	""	"771"	"41"	"35.000"	"28.000"	"0.00322867538259913"	"26"	"0.0001686"	"0.001559"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANSNLVLQADR"	"[K].aNSNLVLQADR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"715.40222"	"1429.79717"	"1429.79606"	"0.78"	"0.00055"	"6/112"	"6"	"112"	"295908.200439453"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"49.5374"	"15131"	"15131"	"15103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"29.7"	""	"24.0"	""	"35.7"	""	"53.5"	"52.0"	""	"785"	"17"	"35.000"	"28.000"	"0.85278521270402"	"14"	"0.007443"	"0.09507"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNETPINPR"	"[R].iFNETPINPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"715.40338"	"1429.79949"	"1429.80008"	"-0.42"	"-0.00030"	"7/88"	"7"	"88"	"276197.77557373"	"HCD"	"MS2"	"27.76607"	"20.7"	"100.000"	"83.7221"	"29028"	"29028"	"29004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"29.7"	""	"33.2"	""	"31.5"	"1.2"	"45.0"	"32.7"	""	"789"	"40"	"35.000"	"28.000"	"0.00438578166412588"	"20"	"0.0001991"	"0.002052"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNETPINPR"	"[R].iFNETPINPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"715.40381"	"1429.80034"	"1429.80008"	"0.18"	"0.00013"	"12/88"	"12"	"88"	"263163.496520996"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"83.8545"	"29052"	"29052"	"29034"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"22.0"	""	"30.8"	""	"27.0"	""	"36.7"	"40.6"	""	"777"	"29"	"35.000"	"28.000"	"0.0547508698186898"	"17"	"9.9E-05"	"0.0007455"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEAWVEGR"	"[R].iLQEAWVEGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"715.40381"	"1429.80034"	"1429.80008"	"0.18"	"0.00013"	"8/94"	"8"	"94"	"454955.797790527"	"HCD"	"MS2"	"6.25053"	"27.4"	"100.000"	"101.1778"	"36042"	"36042"	"36024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.4"	""	"29.3"	""	"50.4"	""	"47.5"	""	"44.9"	"53.7"	""	"777"	"47"	"35.000"	"28.000"	"0.000768052705183458"	"23"	"0"	"1.97E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFNETPINPR"	"[R].iFNETPINPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"715.40393"	"1429.80058"	"1429.80008"	"0.35"	"0.00025"	"13/88"	"13"	"88"	"248003.006164551"	"HCD"	"MS2"	"7.600069"	"18.4"	"100.000"	"84.0199"	"29148"	"29148"	"29130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"22.8"	""	"26.0"	""	"32.0"	"2.2"	"33.8"	"31.6"	""	"770"	"25"	"35.000"	"28.000"	"0.112839389942137"	"21"	"0.0001991"	"0.003298"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEAWVEGR"	"[R].iLQEAWVEGR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"Q63186"	"Translation initiation factor eIF-2B subunit delta OS=Rattus norvegicus OX=10116 GN=Eif2b4 PE=2 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"715.40436"	"1429.80144"	"1429.80008"	"0.95"	"0.00068"	"7/94"	"7"	"94"	"490658.930053711"	"HCD"	"MS2"	"3.558156"	"27.1"	"100.000"	"101.3136"	"36123"	"36123"	"36108"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"36.0"	""	"45.1"	""	"44.4"	""	"45.0"	"55.3"	""	"764"	"39"	"35.000"	"28.000"	"0.00459265014023852"	"22"	"0"	"0.0001994"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EEQVPQNK"	"[K].eEQVPQNk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"715.40625"	"1429.80522"	"1429.80511"	"0.08"	"0.00005"	"4/68"	"4"	"68"	"608324.241394043"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"33.2758"	"8575"	"8575"	"8547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.1"	""	"45.0"	""	"55.5"	""	"85.8"	""	"97.1"	"92.9"	""	"786"	"18"	"35.000"	"28.000"	"0.649220986704003"	""	"0.001348"	"0.01136"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQPGDQVK"	"[R].lSQPGDQVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"715.42377"	"1429.84026"	"1429.84150"	"-0.87"	"-0.00062"	"13/84"	"13"	"84"	"1362521.07751465"	"HCD"	"MS2"	"18.25575"	"110.9"	"100.000"	"45.4744"	"13485"	"13485"	"13464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.4"	""	"129.4"	""	"121.2"	""	"272.6"	"1.0"	"185.0"	"187.2"	""	"745"	"46"	"35.000"	"28.000"	"0.000881305087313445"	""	"0"	"0.0003427"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQPGDQVK"	"[R].lSQPGDQVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"715.42407"	"1429.84087"	"1429.84150"	"-0.44"	"-0.00032"	"13/84"	"13"	"84"	"1684477.80432129"	"HCD"	"MS2"	"17.31409"	"133.7"	"100.000"	"45.2201"	"13416"	"13416"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.2"	""	"169.1"	""	"151.2"	""	"323.2"	""	"223.0"	"202.2"	""	"736"	"46"	"35.000"	"28.000"	"0.000874677225477953"	""	"0"	"9.469E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEVGDTPK"	"[K].iIEVGDTPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"715.43597"	"1429.86467"	"1429.86665"	"-1.38"	"-0.00099"	"8/72"	"8"	"72"	"570420.177062988"	"HCD"	"MS2"	"67.30166"	"38.1"	"100.000"	"79.4509"	"27298"	"27298"	"27274"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.4"	""	"47.4"	""	"50.9"	""	"71.5"	"0.4"	"68.8"	"71.8"	""	"602"	"35"	"34.000"	"27.000"	"0.00898600168294305"	"19"	"9.9E-05"	"0.000456"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEVGDTPK"	"[K].iIEVGDTPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"477.29343"	"1429.86573"	"1429.86665"	"-0.65"	"-0.00031"	"6/72"	"6"	"72"	"871367.576965332"	"HCD"	"MS2"	"26.15295"	"32.9"	"100.000"	"79.5275"	"27302"	"27302"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"42.2"	""	"40.2"	""	"61.5"	""	"65.0"	"66.7"	""	"601"	"33"	"34.000"	"27.000"	"0.0158797798158442"	"23"	"9.9E-05"	"0.0005991"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEVGDTPK"	"[K].iIEVGDTPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"715.43652"	"1429.86577"	"1429.86665"	"-0.62"	"-0.00044"	"7/72"	"7"	"72"	"594253.931335449"	"HCD"	"MS2"	"57.9752"	"40.8"	"100.000"	"79.3705"	"27238"	"27238"	"27217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.9"	""	"49.8"	""	"55.6"	""	"74.7"	""	"71.7"	"76.3"	""	"601"	"29"	"34.000"	"27.000"	"0.0372258374252376"	"17"	"9.9E-05"	"0.0008279"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEVGDTPK"	"[K].iIEVGDTPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"477.29349"	"1429.86591"	"1429.86665"	"-0.52"	"-0.00025"	"6/72"	"6"	"72"	"917774.552490234"	"HCD"	"MS2"	"22.26751"	"36.2"	"100.000"	"79.6355"	"27373"	"27373"	"27350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.3"	""	"44.2"	""	"48.4"	""	"72.0"	""	"71.8"	"68.4"	""	"592"	"27"	"34.000"	"27.000"	"0.0566619753806242"	"21"	"0.0001686"	"0.001297"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEVGDTPK"	"[K].iIEVGDTPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"715.43719"	"1429.86711"	"1429.86665"	"0.32"	"0.00023"	"5/72"	"5"	"72"	"439720.115966797"	"HCD"	"MS2"	"4.974899"	"34.3"	"100.000"	"79.6612"	"27356"	"27356"	"27339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"39.1"	""	"43.3"	""	"62.9"	""	"68.9"	"74.6"	""	"592"	"26"	"34.000"	"27.000"	"0.0782152992167296"	"17"	"0.001453"	"0.01178"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEVGDTPK"	"[K].iIEVGDTPk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"P61621"	"Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus norvegicus OX=10116 GN=Sec61a1 PE=2 SV=2"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"715.43719"	"1429.86711"	"1429.86665"	"0.32"	"0.00023"	"8/72"	"8"	"72"	"643732.656433105"	"HCD"	"MS2"	"6.184085"	"50.6"	"100.000"	"79.7462"	"27418"	"27418"	"27398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.6"	""	"54.5"	""	"65.4"	""	"85.3"	""	"109.0"	"106.8"	""	"592"	"58"	"34.000"	"27.000"	"5.16763357264469E-05"	""	"0"	"3.538E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"477.58310"	"1430.73474"	"1430.73615"	"-0.98"	"-0.00047"	"6/80"	"6"	"80"	"1615096.23815918"	"HCD"	"MS2"	"2.724647"	"5.8"	"100.000"	"94.1264"	"33221"	"33221"	"33204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.1"	""	"5.8"	""	"9.3"	""	"9.4"	""	"11.7"	"10.3"	"NoQuanLabels"	"681"	"44"	"35.000"	"28.000"	"0.00130652317090121"	"20"	"0"	"0.0002079"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"477.58344"	"1430.73575"	"1430.73615"	"-0.28"	"-0.00013"	"6/80"	"6"	"80"	"1567343.24853516"	"HCD"	"MS2"	"2.475032"	"5.7"	"100.000"	"94.1916"	"33212"	"33212"	"33195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.6"	""	"6.9"	""	"7.1"	""	"11.2"	""	"12.3"	"9.5"	"NoQuanLabels"	"692"	"32"	"35.000"	"28.000"	"0.0233924709485626"	"17"	"0"	"0.0003176"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"477.58359"	"1430.73621"	"1430.73615"	"0.04"	"0.00002"	"6/80"	"6"	"80"	"971477.974731445"	"HCD"	"MS2"	"18.56793"	"9.5"	"100.000"	"93.8355"	"33102"	"33102"	"33078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"8.2"	""	"11.7"	""	"21.6"	""	"18.7"	"21.1"	"NoQuanLabels"	"689"	"44"	"35.000"	"28.000"	"0.00147634965276918"	"17"	"0"	"8.49E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"477.58359"	"1430.73621"	"1430.73615"	"0.04"	"0.00002"	"6/80"	"6"	"80"	"1054181.15551758"	"HCD"	"MS2"	"43.72186"	"12.9"	"100.000"	"93.9074"	"33096"	"33096"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"11.0"	""	"14.5"	""	"24.9"	""	"32.7"	"30.7"	"NoQuanLabels"	"689"	"23"	"35.000"	"28.000"	"0.167567282360709"	"16"	"9.9E-05"	"0.0006756"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"715.89227"	"1430.77727"	"1430.78007"	"-1.96"	"-0.00140"	"9/100"	"9"	"100"	"810765.350463867"	"HCD"	"MS2"	"33.92396"	"58.2"	"100.000"	"56.0187"	"17767"	"17767"	"17750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.6"	""	"74.2"	""	"72.7"	""	"78.7"	"1.2"	"114.7"	"130.7"	""	"891"	"58"	"36.000"	"29.000"	"6.85247892255002E-05"	"23"	"0"	"3.382E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEATLVVGGDGR"	"[R].qEATLVVGGDGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"715.89270"	"1430.77812"	"1430.78007"	"-1.36"	"-0.00097"	"12/126"	"12"	"126"	"227846.90222168"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"47.1700"	"14168"	"14168"	"14142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.9"	""	"28.2"	""	"33.1"	""	"23.5"	"0.6"	"41.3"	"35.4"	""	"897"	"24"	"36.000"	"29.000"	"0.1818705781486"	"23"	"0.0001686"	"0.001114"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"715.89288"	"1430.77849"	"1430.78007"	"-1.11"	"-0.00079"	"9/100"	"9"	"100"	"815849.033081055"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"55.6827"	"17665"	"17665"	"17646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.0"	""	"67.9"	""	"77.5"	""	"90.5"	"1.1"	"114.6"	"123.9"	""	"892"	"51"	"36.000"	"29.000"	"0.000360026823490982"	"24"	"0"	"9.971E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"715.89337"	"1430.77947"	"1430.78007"	"-0.42"	"-0.00030"	"9/100"	"9"	"100"	"497632.773986816"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"55.9782"	"17782"	"17782"	"17763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.0"	""	"56.9"	""	"62.5"	""	"64.1"	"0.6"	"94.6"	"86.6"	""	"897"	"52"	"36.000"	"29.000"	"0.000311718406438575"	"23"	"0"	"1.406E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSNIGEQR"	"[K].gIIDSNIGEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"715.89374"	"1430.78020"	"1430.78007"	"0.09"	"0.00006"	"9/100"	"9"	"100"	"441087.944519043"	"HCD"	"MS2"	"0"	"42.3"	"100.000"	"56.3555"	"17900"	"17900"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"47.1"	""	"63.3"	""	"55.1"	"0.7"	"95.0"	"86.6"	""	"882"	"48"	"36.000"	"29.000"	"0.000653790475549365"	"20"	"0"	"4.18E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEATLVVGGDGR"	"[R].qEATLVVGGDGR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"715.89398"	"1430.78069"	"1430.78007"	"0.43"	"0.00031"	"7/126"	"7"	"126"	"216294.784423828"	"HCD"	"MS2"	"40.39302"	"19.6"	"100.000"	"46.8708"	"14084"	"14084"	"14064"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"28.8"	""	"31.4"	""	"28.0"	""	"31.8"	"40.0"	""	"881"	"26"	"36.000"	"29.000"	"0.110140213182728"	"21"	"0.0001686"	"0.001073"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEYEYK"	"[R].qIEYEYk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"715.90002"	"1430.79277"	"1430.79315"	"-0.27"	"-0.00019"	"6/64"	"6"	"64"	"588004.752502441"	"HCD"	"MS2"	"5.35551"	"64.1"	"100.000"	"62.0092"	"20195"	"20195"	"20167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.6"	""	"36.5"	""	"40.1"	""	"117.5"	"0.8"	"168.2"	"165.3"	""	"900"	"28"	"36.000"	"29.000"	"0.0769506891790628"	"27"	"0.001261"	"0.01021"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEYEYK"	"[R].qIEYEYk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"715.90045"	"1430.79363"	"1430.79315"	"0.33"	"0.00024"	"6/64"	"6"	"64"	"342568.175354004"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"61.6911"	"20067"	"20067"	"20037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.7"	""	"26.5"	""	"22.4"	""	"67.0"	""	"97.1"	"99.7"	""	"900"	"30"	"36.000"	"29.000"	"0.047666417632978"	"23"	"0.001049"	"0.008716"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEYEYK"	"[R].qIEYEYk.[L]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.5484"	"0.0000"	"1"	"1"	"1"	"715.90076"	"1430.79424"	"1430.79315"	"0.76"	"0.00054"	"5/64"	"5"	"64"	"485301.97845459"	"HCD"	"MS2"	"13.38101"	"49.8"	"100.000"	"61.6939"	"20101"	"20101"	"20070"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	""	"29.2"	""	"22.6"	""	"96.9"	""	"151.5"	"146.9"	""	"906"	"31"	"36.000"	"29.000"	"0.0324412964826445"	"28"	"0.0001991"	"0.00459"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEVEGAVK"	"[K].lQEVEGAVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"715.93329"	"1430.85930"	"1430.86190"	"-1.82"	"-0.00130"	"6/82"	"6"	"82"	"252580.563232422"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"77.1152"	"26324"	"26324"	"26305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"22.0"	""	"25.2"	""	"56.0"	"0.7"	"59.0"	"50.7"	""	"690"	"18"	"35.000"	"28.000"	"0.496385509498266"	"27"	"0.007443"	"0.09508"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEVEGAVK"	"[K].lQEVEGAVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"715.93329"	"1430.85930"	"1430.86190"	"-1.82"	"-0.00130"	"8/82"	"8"	"82"	"774036.790771484"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"76.9585"	"26294"	"26294"	"26272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"41.6"	""	"37.0"	""	"181.9"	"1.8"	"187.2"	"130.0"	""	"690"	"57"	"35.000"	"28.000"	"6.46873105283258E-05"	""	"0"	"1.919E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEVEGAVK"	"[K].lQEVEGAVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"715.93353"	"1430.85979"	"1430.86190"	"-1.48"	"-0.00106"	"8/82"	"8"	"82"	"747230.858032227"	"HCD"	"MS2"	"0"	"57.0"	"100.000"	"76.8220"	"26208"	"26208"	"26184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"40.5"	""	"35.5"	""	"160.1"	""	"166.9"	"116.2"	""	"700"	"57"	"35.000"	"28.000"	"6.91939374039152E-05"	""	"0"	"3.83E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"477.62485"	"1430.85999"	"1430.86190"	"-1.34"	"-0.00064"	"10/82"	"10"	"82"	"2086183.5111084"	"HCD"	"MS2"	"20.5661"	"71.6"	"100.000"	"64.2588"	"21108"	"21108"	"21085"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.4"	""	"99.8"	""	"108.8"	""	"107.8"	""	"118.3"	"132.2"	""	"702"	"32"	"35.000"	"28.000"	"0.024451590645288"	"24"	"9.9E-05"	"0.0005445"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6727"	"0.0000"	"1"	"1"	"1"	"715.93365"	"1430.86003"	"1430.86190"	"-1.31"	"-0.00093"	"8/82"	"8"	"82"	"1532346.42877197"	"HCD"	"MS2"	"6.332464"	"109.3"	"100.000"	"64.2551"	"21139"	"21139"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.2"	""	"149.3"	""	"156.7"	""	"164.3"	"0.0"	"186.0"	"188.9"	""	"702"	"55"	"35.000"	"28.000"	"0.000106244661326356"	""	"0"	"2.311E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEVEGAVK"	"[K].lQEVEGAVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"2"	"2"	"0.0952"	"0.0000"	"1"	"1"	"1"	"715.93372"	"1430.86016"	"1430.86190"	"-1.22"	"-0.00087"	"7/82"	"7"	"82"	"284168.004699707"	"HCD"	"MS2"	"42.64979"	"24.2"	"100.000"	"77.2280"	"26399"	"26399"	"26389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"20.0"	""	"22.6"	""	"53.4"	""	"57.4"	"45.4"	""	"702"	"21"	"35.000"	"28.000"	"0.282037668887152"	""	"0.001596"	"0.01306"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"715.93378"	"1430.86028"	"1430.86190"	"-1.13"	"-0.00081"	"8/82"	"8"	"82"	"1617550.68365479"	"HCD"	"MS2"	"0"	"113.4"	"100.000"	"64.2842"	"21118"	"21118"	"21101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.2"	""	"155.4"	""	"161.5"	""	"157.4"	"3.0"	"200.7"	"206.9"	""	"696"	"54"	"35.000"	"28.000"	"0.000144736892451919"	""	"0"	"5.332E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLVEIEK"	"[K].nQLVEIEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"3"	"3"	"0.4483"	"0.0000"	"1"	"1"	"1"	"477.62506"	"1430.86063"	"1430.86190"	"-0.89"	"-0.00042"	"10/74"	"10"	"74"	"629632.985839844"	"HCD"	"MS2"	"44.81282"	"26.9"	"100.000"	"73.7690"	"24968"	"24968"	"24945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.5"	""	"29.7"	""	"31.9"	""	"51.7"	""	"52.1"	"52.2"	""	"688"	"29"	"35.000"	"28.000"	"0.0470498716004972"	""	"0.0001991"	"0.003854"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLVEIEK"	"[K].nQLVEIEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"715.93396"	"1430.86064"	"1430.86190"	"-0.88"	"-0.00063"	"14/74"	"14"	"74"	"927798.175354004"	"HCD"	"MS2"	"4.193179"	"79.4"	"100.000"	"73.8015"	"24981"	"24981"	"24961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.1"	""	"82.0"	""	"77.5"	""	"168.9"	"0.8"	"153.5"	"132.8"	""	"688"	"45"	"35.000"	"28.000"	"0.00098982505466907"	""	"0"	"0.0003703"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"477.62518"	"1430.86100"	"1430.86190"	"-0.63"	"-0.00030"	"8/82"	"8"	"82"	"1196930.51196289"	"HCD"	"MS2"	"38.9418"	"40.5"	"100.000"	"64.8477"	"21381"	"21381"	"21362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"52.1"	""	"57.6"	""	"62.8"	""	"81.1"	"78.6"	""	"688"	"12"	"35.000"	"28.000"	"2.21594227337221"	"21"	"0.0007633"	"0.0073"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLVEIEK"	"[K].nQLVEIEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"715.93414"	"1430.86101"	"1430.86190"	"-0.62"	"-0.00045"	"7/74"	"7"	"74"	"642990.249084473"	"HCD"	"MS2"	"18.46709"	"56.3"	"100.000"	"73.4741"	"24848"	"24848"	"24826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.8"	""	"65.3"	""	"53.6"	""	"141.2"	""	"85.2"	"88.2"	""	"688"	"42"	"35.000"	"28.000"	"0.00201631528592826"	""	"0"	"0.0003175"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"715.93414"	"1430.86101"	"1430.86190"	"-0.62"	"-0.00045"	"8/82"	"8"	"82"	"2659598.34204102"	"HCD"	"MS2"	"7.149176"	"175.0"	"100.000"	"64.5537"	"21261"	"21261"	"21243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.2"	""	"237.4"	""	"256.4"	""	"255.3"	"2.7"	"299.3"	"318.1"	""	"688"	"58"	"35.000"	"28.000"	"5.61769870075651E-05"	""	"0"	"2.678E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"477.62521"	"1430.86109"	"1430.86190"	"-0.57"	"-0.00027"	"10/82"	"10"	"82"	"3350439.48022461"	"HCD"	"MS2"	"12.68829"	"105.8"	"100.000"	"64.5586"	"21263"	"21263"	"21243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.8"	""	"152.2"	""	"156.3"	""	"146.3"	""	"184.6"	"195.9"	""	"688"	"36"	"35.000"	"28.000"	"0.00911084047680704"	"24"	"9.9E-05"	"0.0008658"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLVEIEK"	"[K].nQLVEIEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"715.93420"	"1430.86113"	"1430.86190"	"-0.54"	"-0.00038"	"14/74"	"14"	"74"	"696913.830322266"	"HCD"	"MS2"	"16.893"	"58.1"	"100.000"	"73.6134"	"24934"	"24934"	"24913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.8"	""	"69.8"	""	"52.8"	""	"131.4"	""	"102.1"	"90.8"	""	"688"	"45"	"35.000"	"28.000"	"0.00105574356400656"	""	"0"	"0.0002462"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLVEIEK"	"[K].nQLVEIEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"715.93457"	"1430.86186"	"1430.86190"	"-0.03"	"-0.00002"	"14/74"	"14"	"74"	"933214.065307617"	"HCD"	"MS2"	"6.854067"	"77.7"	"100.000"	"73.9109"	"25055"	"25055"	"25035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.5"	""	"87.4"	""	"70.2"	""	"190.8"	""	"132.0"	"132.2"	""	"685"	"44"	"35.000"	"28.000"	"0.00129318475391955"	""	"0"	"0.0001991"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"477.62549"	"1430.86191"	"1430.86190"	"0.01"	"0.00000"	"10/82"	"10"	"82"	"3313164.23742676"	"HCD"	"MS2"	"12.6738"	"106.3"	"100.000"	"64.5736"	"21235"	"21235"	"21217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.9"	""	"146.2"	""	"154.7"	""	"141.4"	""	"185.3"	"209.6"	""	"685"	"34"	"35.000"	"28.000"	"0.0125216216127495"	"24"	"0.0001686"	"0.001658"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"477.62561"	"1430.86228"	"1430.86190"	"0.26"	"0.00013"	"6/82"	"6"	"82"	"1143482.59790039"	"HCD"	"MS2"	"38.38262"	"39.5"	"100.000"	"64.8718"	"21357"	"21357"	"21339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.6"	""	"58.4"	""	"52.1"	""	"59.9"	"0.2"	"79.0"	"67.5"	""	"684"	"11"	"35.000"	"28.000"	"2.58836850097173"	"15"	"0.001348"	"0.01091"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"715.93494"	"1430.86260"	"1430.86190"	"0.49"	"0.00035"	"8/82"	"8"	"82"	"2625449.40551758"	"HCD"	"MS2"	"4.15406"	"194.6"	"100.000"	"64.5687"	"21233"	"21233"	"21217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.4"	""	"263.3"	""	"273.8"	""	"287.9"	"1.7"	"325.9"	"375.2"	""	"682"	"52"	"35.000"	"28.000"	"0.000227381108301845"	""	"0"	"4.37E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVENYFMR"	"[K].dIVENYFmR.[D]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"716.35883"	"1431.71037"	"1431.71397"	"-2.51"	"-0.00180"	"6/78"	"6"	"78"	"231918.854675293"	"HCD"	"MS2"	"30.70761"	"14.1"	"100.000"	"94.4146"	"33338"	"33338"	"33310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.7"	""	"18.1"	""	"15.0"	""	"22.5"	""	"30.4"	"27.2"	""	"569"	"22"	"34.000"	"27.000"	"0.193233433479589"	"18"	"0.001348"	"0.01056"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFEADPFYSR"	"[R].aFEADPFYSR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MM4"	"TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Trafd1 PE=1 SV=2"	"Q99MM4"	"TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Trafd1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"716.35968"	"1431.71208"	"1431.71060"	"1.04"	"0.00074"	"5/84"	"5"	"84"	"341293.078186035"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"93.0150"	"32771"	"32771"	"32753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"21.3"	""	"23.7"	""	"42.4"	""	"43.7"	"43.3"	""	"561"	"4"	"34.000"	"27.000"	"11.1926485112581"	"13"	"0.004672"	"0.05488"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVENYFMR"	"[K].dIVENYFmR.[D]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"716.36060"	"1431.71391"	"1431.71397"	"-0.04"	"-0.00003"	"5/78"	"5"	"78"	"307689.154724121"	"HCD"	"MS2"	"28.94364"	"18.3"	"100.000"	"94.4890"	"33333"	"33333"	"33303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"18.1"	""	"28.0"	""	"29.5"	""	"37.2"	"37.3"	""	"559"	"23"	"34.000"	"27.000"	"0.129533414066293"	"16"	"0.0004582"	"0.006392"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVENYFMR"	"[K].dIVENYFmR.[D]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.36084"	"1431.71440"	"1431.71397"	"0.30"	"0.00022"	"5/78"	"5"	"78"	"278216.516357422"	"HCD"	"MS2"	"10.40523"	"16.0"	"100.000"	"94.7026"	"33453"	"33453"	"33436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.3"	""	"18.5"	""	"21.2"	""	"30.5"	""	"32.5"	"28.7"	""	"573"	"24"	"34.000"	"27.000"	"0.125061785936808"	"14"	"0.001596"	"0.01296"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTGDAMSK"	"[R].fTTGDAmSk.[R]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"716.37988"	"1431.75249"	"1431.75539"	"-2.02"	"-0.00145"	"8/76"	"8"	"76"	"745497.398925781"	"HCD"	"MS2"	"0"	"56.7"	"100.000"	"44.4025"	"13050"	"13050"	"13025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.7"	""	"75.4"	""	"58.4"	""	"129.3"	""	"100.8"	"88.8"	""	"801"	"26"	"36.000"	"29.000"	"0.104136390504769"	"16"	"0.001615"	"0.01488"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FTTGDAMSK"	"[R].fTTGDAmSk.[R]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"716.38171"	"1431.75615"	"1431.75539"	"0.53"	"0.00038"	"7/76"	"7"	"76"	"688152.985839844"	"HCD"	"MS2"	"32.11595"	"56.3"	"100.000"	"44.1919"	"13000"	"13000"	"12969"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.9"	""	"67.9"	""	"67.9"	""	"132.3"	"0.2"	"97.5"	"87.3"	""	"841"	"24"	"36.000"	"29.000"	"0.150579551801658"	"18"	"0.001217"	"0.009503"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"477.93417"	"1431.78797"	"1431.79963"	"-8.15"	"-0.00389"	"7/68"	"7"	"68"	"2249844.40789795"	"HCD"	"MS2"	"19.79361"	"140.5"	"100.000"	"47.6207"	"14351"	"14351"	"14334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.7"	""	"148.6"	""	"181.3"	""	"196.7"	"1.0"	"316.9"	"315.1"	""	"891"	"12"	"36.000"	"29.000"	"2.54008183301073"	"15"	"0.005871"	"0.07246"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"477.93497"	"1431.79035"	"1431.79963"	"-6.49"	"-0.00310"	"6/68"	"6"	"68"	"2417889.66265869"	"HCD"	"MS2"	"12.71727"	"144.4"	"100.000"	"47.2733"	"14248"	"14248"	"14225"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.3"	""	"165.2"	""	"168.6"	""	"208.2"	""	"325.8"	"331.2"	""	"886"	"21"	"36.000"	"29.000"	"0.378794553807915"	"18"	"0.00452"	"0.05251"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"477.93732"	"1431.79740"	"1431.79963"	"-1.56"	"-0.00075"	"7/68"	"7"	"68"	"13638905.3773193"	"HCD"	"MS2"	"39.82204"	"496.1"	"100.000"	"44.5355"	"13104"	"13104"	"13088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"739.4"	""	"658.6"	""	"555.8"	""	"838.5"	""	"1021.2"	"893.7"	""	"957"	"35"	"36.000"	"29.000"	"0.0152363851414595"	"24"	"0.0001686"	"0.001071"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHGAFDAVK"	"[R].eHGAFDAVk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"477.93750"	"1431.79795"	"1431.79963"	"-1.18"	"-0.00056"	"14/74"	"14"	"74"	"5088173.81414795"	"HCD"	"MS2"	"22.72912"	"144.2"	"100.000"	"40.8846"	"11621"	"11621"	"11596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.1"	""	"202.6"	""	"203.7"	""	"222.7"	"1.3"	"278.3"	"249.2"	""	"942"	"47"	"36.000"	"29.000"	"0.000871005519538675"	"24"	"0"	"4.705E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"477.93756"	"1431.79813"	"1431.79963"	"-1.05"	"-0.00050"	"6/68"	"6"	"68"	"4336326.9352417"	"HCD"	"MS2"	"47.42432"	"219.9"	"100.000"	"47.5680"	"14367"	"14367"	"14347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.7"	""	"100.5"	""	"194.7"	""	"181.3"	""	"1183.4"	"391.7"	""	"941"	"26"	"36.000"	"29.000"	"0.130184604416612"	"23"	"0.0001991"	"0.002564"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"716.40271"	"1431.79814"	"1431.79963"	"-1.04"	"-0.00075"	"7/68"	"7"	"68"	"6621772.05505371"	"HCD"	"MS2"	"0"	"498.8"	"100.000"	"44.6962"	"13202"	"13202"	"13188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"719.0"	""	"574.9"	""	"537.1"	""	"835.7"	""	"1074.4"	"996.3"	""	"941"	"40"	"36.000"	"29.000"	"0.0046726110078205"	"20"	"0.0001991"	"0.003413"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"716.40283"	"1431.79839"	"1431.79963"	"-0.87"	"-0.00062"	"7/68"	"7"	"68"	"5812108.40496826"	"HCD"	"MS2"	"0"	"420.1"	"100.000"	"44.9367"	"13267"	"13267"	"13252"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"614.6"	""	"503.6"	""	"446.4"	""	"695.7"	""	"897.3"	"832.3"	""	"963"	"40"	"36.000"	"29.000"	"0.00483722503019048"	"22"	"0.0001991"	"0.002283"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHGAFDAVK"	"[R].eHGAFDAVk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"477.93765"	"1431.79840"	"1431.79963"	"-0.86"	"-0.00041"	"13/74"	"13"	"74"	"4953166.21746826"	"HCD"	"MS2"	"23.33921"	"144.8"	"100.000"	"40.7570"	"11604"	"11604"	"11579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.1"	""	"188.4"	""	"196.6"	""	"232.1"	"0.9"	"289.4"	"247.2"	""	"963"	"46"	"36.000"	"29.000"	"0.00130495727075544"	"24"	"0"	"4.356E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"477.93774"	"1431.79868"	"1431.79963"	"-0.67"	"-0.00032"	"6/68"	"6"	"68"	"1450482.0411377"	"HCD"	"MS2"	"0"	"79.4"	"100.000"	"46.8960"	"14094"	"14094"	"14075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.8"	""	"99.9"	""	"100.4"	""	"128.9"	"1.3"	"162.7"	"148.7"	""	"962"	"27"	"36.000"	"29.000"	"0.0933566107122127"	"19"	"0.0001991"	"0.005407"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"477.93774"	"1431.79868"	"1431.79963"	"-0.67"	"-0.00032"	"7/68"	"7"	"68"	"19803743.2973022"	"HCD"	"MS2"	"31.91162"	"740.8"	"100.000"	"44.3318"	"13056"	"13056"	"13045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1130.7"	""	"960.7"	""	"818.7"	""	"1265.3"	"1.4"	"1519.8"	"1329.0"	""	"962"	"36"	"36.000"	"29.000"	"0.0109432186420137"	"23"	"9.9E-05"	"0.0004478"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"716.40302"	"1431.79875"	"1431.79963"	"-0.62"	"-0.00044"	"7/68"	"7"	"68"	"3950372.35968018"	"HCD"	"MS2"	"32.19643"	"299.6"	"100.000"	"44.6409"	"13146"	"13146"	"13130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"458.6"	""	"370.2"	""	"340.9"	""	"525.3"	""	"600.5"	"547.6"	""	"962"	"38"	"36.000"	"29.000"	"0.00801945909237061"	"19"	"0.0001991"	"0.00272"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"477.93784"	"1431.79895"	"1431.79963"	"-0.48"	"-0.00023"	"7/68"	"7"	"68"	"5548439.00592041"	"HCD"	"MS2"	"16.22658"	"227.4"	"100.000"	"45.5030"	"13531"	"13531"	"13512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.8"	""	"307.9"	""	"256.7"	""	"369.4"	""	"478.1"	"440.3"	""	"949"	"38"	"36.000"	"29.000"	"0.00674895009489778"	"24"	"9.9E-05"	"0.0004838"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"477.93787"	"1431.79905"	"1431.79963"	"-0.41"	"-0.00020"	"7/68"	"7"	"68"	"1452527.18585205"	"HCD"	"MS2"	"0"	"76.9"	"100.000"	"47.3033"	"14222"	"14222"	"14196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.1"	""	"97.7"	""	"98.6"	""	"129.9"	"2.1"	"158.8"	"139.0"	""	"949"	"18"	"36.000"	"29.000"	"0.774883149275861"	"18"	"0.00296"	"0.0314"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"477.93796"	"1431.79932"	"1431.79963"	"-0.22"	"-0.00010"	"6/68"	"6"	"68"	"4444793.94610596"	"HCD"	"MS2"	"50.35512"	"219.2"	"100.000"	"47.9109"	"14469"	"14469"	"14453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.2"	""	"93.2"	""	"181.5"	""	"169.0"	""	"1171.0"	"417.2"	""	"948"	"26"	"36.000"	"29.000"	"0.131455372960497"	"22"	"0.0001991"	"0.00236"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"477.93796"	"1431.79932"	"1431.79963"	"-0.22"	"-0.00010"	"6/68"	"6"	"68"	"5714416.71063232"	"HCD"	"MS2"	"14.38005"	"242.2"	"100.000"	"45.7366"	"13592"	"13592"	"13573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"329.6"	""	"343.4"	""	"274.6"	""	"402.7"	"1.8"	"496.8"	"449.1"	""	"948"	"27"	"36.000"	"29.000"	"0.0913646808852504"	"22"	"0.0001991"	"0.003415"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"477.93802"	"1431.79950"	"1431.79963"	"-0.09"	"-0.00004"	"6/68"	"6"	"68"	"2010195.93218994"	"HCD"	"MS2"	"10.16133"	"108.2"	"100.000"	"46.6000"	"13974"	"13974"	"13951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.6"	""	"141.8"	""	"139.5"	""	"181.4"	"1.9"	"216.4"	"192.0"	""	"949"	"25"	"36.000"	"29.000"	"0.142310261525964"	"19"	"0.001049"	"0.008688"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"716.40375"	"1431.80022"	"1431.79963"	"0.41"	"0.00029"	"7/68"	"7"	"68"	"4257446.21081543"	"HCD"	"MS2"	"38.17166"	"171.3"	"100.000"	"44.4212"	"13092"	"13092"	"13077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.8"	""	"207.8"	""	"194.0"	""	"317.1"	"0.1"	"335.4"	"308.1"	""	"947"	"39"	"36.000"	"29.000"	"0.00573218216236153"	"21"	"0.0001991"	"0.003484"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"477.93851"	"1431.80097"	"1431.79963"	"0.93"	"0.00044"	"5/68"	"5"	"68"	"1658025.46643066"	"HCD"	"MS2"	"9.584487"	"97.0"	"100.000"	"46.9589"	"14082"	"14082"	"14061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.1"	""	"124.5"	""	"132.8"	""	"158.7"	"1.1"	"184.4"	"181.3"	""	"948"	"11"	"36.000"	"29.000"	"4.04369454044338"	"16"	"0.008893"	"0.115"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"477.93854"	"1431.80106"	"1431.79963"	"0.99"	"0.00047"	"7/68"	"7"	"68"	"270413353.78125"	"HCD"	"MS2"	"4.010852"	"495.8"	"4.787"	"45.0950"	"13331"	"13331"	"13318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"692.0"	""	"560.8"	""	"555.5"	""	"788.1"	""	"1112.5"	"1005.0"	""	"948"	"40"	"36.000"	"29.000"	"0.00436293097011003"	"27"	"0.0001686"	"0.001106"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"477.93857"	"1431.80115"	"1431.79963"	"1.06"	"0.00051"	"6/68"	"6"	"68"	"129643345.948242"	"HCD"	"MS2"	"4.124445"	"416.1"	"8.310"	"44.9351"	"13300"	"13300"	"13283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"559.7"	""	"503.8"	""	"475.9"	""	"668.6"	""	"923.9"	"823.1"	""	"948"	"27"	"36.000"	"29.000"	"0.0854630409167435"	"22"	"0.0001991"	"0.003027"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEQHFk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"477.93887"	"1431.80207"	"1431.79963"	"1.70"	"0.00081"	"7/68"	"7"	"68"	"937684005.90625"	"HCD"	"MS2"	"3.448617"	"559.0"	"1.610"	"44.6276"	"13175"	"13175"	"13163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"836.9"	""	"636.4"	""	"639.9"	""	"875.5"	""	"1221.0"	"1107.9"	""	"962"	"37"	"36.000"	"29.000"	"0.0100726809126428"	"24"	"0.0001686"	"0.001703"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELDDILK"	"[K].qELDDILk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"716.42664"	"1431.84599"	"1431.84592"	"0.05"	"0.00004"	"6/76"	"6"	"76"	"196668.293884277"	"HCD"	"MS2"	"29.4975"	"18.6"	"100.000"	"99.7557"	"35493"	"35493"	"35466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"23.2"	""	"20.9"	""	"33.8"	""	"36.7"	"36.7"	""	"877"	"33"	"36.000"	"29.000"	"0.0206048566623387"	"29"	"0.0001686"	"0.001556"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEALEAK"	"[R].aLEEALEAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"716.42676"	"1431.84624"	"1431.84592"	"0.23"	"0.00016"	"8/72"	"8"	"72"	"688428.494140625"	"HCD"	"MS2"	"3.68722"	"46.3"	"100.000"	"93.5725"	"32996"	"32996"	"32984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"17.3"	""	"27.3"	""	"123.8"	"0.5"	"145.7"	"109.1"	""	"876"	"41"	"36.000"	"29.000"	"0.00313670813673251"	"27"	"0"	"4.217E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QELDDILK"	"[K].qELDDILk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"D3ZD32"	"Chromodomain-helicase-DNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Chd5 PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"716.42688"	"1431.84648"	"1431.84592"	"0.40"	"0.00028"	"6/76"	"6"	"76"	"302498.621276855"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"99.7335"	"35456"	"35456"	"35429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.2"	""	"27.4"	""	"30.4"	""	"47.2"	"1.7"	"56.6"	"58.0"	""	"876"	"27"	"36.000"	"29.000"	"0.0927842177238844"	"27"	"0.0001991"	"0.004448"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEALEAK"	"[R].aLEEALEAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.6744"	"0.0000"	"1"	"1"	"1"	"716.42700"	"1431.84673"	"1431.84592"	"0.57"	"0.00041"	"7/72"	"7"	"72"	"667649.502624512"	"HCD"	"MS2"	"13.26758"	"47.7"	"100.000"	"93.6331"	"32984"	"32984"	"32964"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"21.3"	""	"23.1"	""	"125.3"	""	"158.0"	"113.6"	""	"871"	"43"	"36.000"	"29.000"	"0.00238225451840325"	"29"	"0"	"6.438E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGVALQEK"	"[K].eVGVALqEk.[L]"	"N-Term(TMT6plex); Q7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"477.95892"	"1431.86222"	"1431.84592"	"11.38"	"0.00543"	"7/82"	"7"	"82"	"2064149.64849854"	"HCD"	"MS2"	"60.00172"	"70.5"	"100.000"	"64.2436"	"21135"	"21135"	"21115"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.1"	""	"89.9"	""	"101.6"	""	"102.4"	"1.9"	"124.2"	"135.9"	""	"743"	"15"	"35.000"	"28.000"	"1.09385263695624"	"16"	"0.008289"	"0.1054"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTALAELVK"	"[K].qTALAELVk.[H]"	"N-Term(TMT6plex); Q1(Deamidated); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"716.44519"	"1431.88310"	"1431.88230"	"0.56"	"0.00040"	"7/88"	"7"	"88"	"312938.800170898"	"HCD"	"MS2"	"53.17904"	"25.2"	"100.000"	"101.0254"	"35981"	"35981"	"35960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.7"	""	"39.3"	""	"37.2"	""	"36.5"	""	"45.7"	"41.6"	""	"631"	"33"	"34.000"	"28.000"	"0.0153108521801149"	"23"	"9.9E-05"	"0.0005578"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFEDIHHYR"	"[K].sFEDIHHYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"478.24307"	"1432.71466"	"1432.71708"	"-1.69"	"-0.00080"	"13/70"	"13"	"70"	"2903475.78955078"	"HCD"	"MS2"	"35.34644"	"91.2"	"100.000"	"33.6823"	"8741"	"8741"	"8713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.7"	""	"122.7"	""	"124.8"	""	"140.7"	"0.3"	"178.0"	"184.1"	""	"600"	"26"	"34.000"	"27.000"	"0.0696821038907132"	"21"	"0.0001686"	"0.001205"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFEDIHHYR"	"[K].sFEDIHHYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"0"	"4"	"4"	"0.7895"	"0.0000"	"1"	"1"	"1"	"358.93423"	"1432.71511"	"1432.71708"	"-1.37"	"-0.00049"	"8/70"	"8"	"70"	"5045232.44128418"	"HCD"	"MS2"	"40.40587"	"119.4"	"100.000"	"33.6850"	"8704"	"8704"	"8680"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.5"	""	"144.6"	""	"191.5"	""	"180.3"	""	"254.0"	"233.5"	""	"596"	"19"	"34.000"	"27.000"	"0.35992852286182"	"18"	"0.001615"	"0.01389"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFEDIHHYR"	"[K].sFEDIHHYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"P08644"	"GTPase KRas OS=Rattus norvegicus OX=10116 GN=Kras PE=1 SV=3"	"0"	"4"	"4"	"0.5652"	"0.0000"	"1"	"1"	"1"	"358.93472"	"1432.71706"	"1432.71708"	"-0.01"	"0.00000"	"6/70"	"6"	"70"	"4941402.27545166"	"HCD"	"MS2"	"55.43877"	"121.4"	"100.000"	"33.5676"	"8694"	"8694"	"8665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.4"	""	"161.1"	""	"197.0"	""	"189.3"	"0.8"	"243.2"	"233.4"	""	"607"	"23"	"34.000"	"27.000"	"0.137138279117789"	"24"	"0.001348"	"0.01064"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLHDESGLNR"	"[R].yLHDESGLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"478.25058"	"1432.73719"	"1432.73821"	"-0.71"	"-0.00034"	"5/78"	"5"	"78"	"5959427.10473633"	"HCD"	"MS2"	"34.58252"	"171.4"	"100.000"	"34.4468"	"9049"	"9049"	"9030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.4"	""	"216.6"	""	"234.2"	""	"256.3"	"3.4"	"309.7"	"339.4"	""	"769"	"34"	"35.000"	"28.000"	"0.0138642488241821"	"18"	"0"	"1.973E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLHDESGLNR"	"[R].yLHDESGLNR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"478.25076"	"1432.73774"	"1432.73821"	"-0.33"	"-0.00016"	"9/78"	"9"	"78"	"5601813.7645874"	"HCD"	"MS2"	"21.28311"	"140.3"	"100.000"	"34.5778"	"9066"	"9066"	"9047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.3"	""	"166.7"	""	"194.2"	""	"224.1"	"8.4"	"237.9"	"265.0"	""	"770"	"37"	"35.000"	"28.000"	"0.00735293504548001"	"18"	"0"	"0.0002909"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INDFEEAIPR"	"[K].iNDFEEAIPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P689"	"Protein wntless homolog OS=Rattus norvegicus OX=10116 GN=Wls PE=1 SV=1"	"Q6P689"	"Protein wntless homolog OS=Rattus norvegicus OX=10116 GN=Wls PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"716.88739"	"1432.76750"	"1432.76336"	"2.89"	"0.00207"	"10/94"	"10"	"94"	"214900.268554688"	"HCD"	"MS2"	"39.97165"	"17.0"	"100.000"	"100.8869"	"35925"	"35925"	"35906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"22.8"	""	"17.9"	""	"30.7"	""	"35.7"	"32.3"	""	"972"	"17"	"36.000"	"29.000"	"1.02008478344103"	"18"	"0.001951"	"0.01669"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGEQHFK"	"[K].dLGEqHFk.[G]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"478.26474"	"1432.77967"	"1432.78365"	"-2.78"	"-0.00133"	"6/68"	"6"	"68"	"3415574.47015381"	"HCD"	"MS2"	"21.56608"	"141.9"	"100.000"	"49.2417"	"15045"	"15045"	"15022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.4"	""	"217.5"	""	"199.8"	""	"190.9"	""	"271.5"	"229.8"	""	"986"	"27"	"36.000"	"29.000"	"0.0974646032575149"	"24"	"0.0001991"	"0.002721"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"478.26569"	"1432.78250"	"1432.78365"	"-0.80"	"-0.00038"	"11/60"	"11"	"60"	"2193881.76452637"	"HCD"	"MS2"	"0"	"97.3"	"100.000"	"42.3130"	"12231"	"12231"	"12215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.7"	""	"101.8"	""	"125.3"	""	"164.9"	"2.0"	"200.5"	"200.4"	""	"1009"	"42"	"37.000"	"30.000"	"0.00329504363810649"	"21"	"9.9E-05"	"0.0005126"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"478.26572"	"1432.78260"	"1432.78365"	"-0.74"	"-0.00035"	"7/60"	"7"	"60"	"12702708.6240845"	"HCD"	"MS2"	"3.301625"	"438.8"	"100.000"	"42.1640"	"12137"	"12137"	"12120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"668.5"	""	"489.6"	""	"547.8"	""	"722.3"	""	"862.7"	"876.7"	""	"1009"	"38"	"37.000"	"30.000"	"0.00816321378990927"	"20"	"0"	"0.0002255"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"478.26587"	"1432.78305"	"1432.78365"	"-0.42"	"-0.00020"	"6/60"	"6"	"60"	"2100557.38983154"	"HCD"	"MS2"	"7.693274"	"94.5"	"100.000"	"42.4696"	"12261"	"12261"	"12240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"97.0"	""	"128.2"	""	"137.5"	"1.6"	"204.4"	"197.4"	""	"992"	"37"	"36.000"	"29.000"	"0.00927858341621437"	"22"	"9.9E-05"	"0.001007"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"478.26590"	"1432.78315"	"1432.78365"	"-0.35"	"-0.00017"	"7/60"	"7"	"60"	"13446655.5643921"	"HCD"	"MS2"	"4.062536"	"442.5"	"100.000"	"42.0278"	"12115"	"12115"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"633.0"	""	"493.2"	""	"560.9"	""	"723.1"	""	"902.7"	"894.4"	""	"992"	"34"	"36.000"	"29.000"	"0.0205817205146644"	"20"	"9.9E-05"	"0.0004562"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHVEEEGK"	"[R].fHVEEEGk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"716.89563"	"1432.78398"	"1432.78365"	"0.23"	"0.00017"	"7/60"	"7"	"60"	"310393.746398926"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"42.2674"	"12179"	"12179"	"12152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.0"	""	"26.7"	""	"30.0"	""	"39.3"	""	"52.4"	"59.7"	""	"998"	"17"	"36.000"	"29.000"	"1.00023154165521"	"16"	"0.001488"	"0.01266"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TREDLDSLVR"	"[R].tREDLDSLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"478.26868"	"1432.79148"	"1432.79572"	"-2.96"	"-0.00142"	"9/100"	"9"	"100"	"2378745.41369629"	"HCD"	"MS2"	"40.43557"	"75.4"	"100.000"	"52.7331"	"16429"	"16429"	"16401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.9"	""	"99.9"	""	"92.3"	""	"111.6"	"1.2"	"155.1"	"144.7"	""	"1013"	"35"	"37.000"	"30.000"	"0.0167332172535147"	"25"	"0"	"0.0002811"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TREDLDSLVR"	"[R].tREDLDSLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"Q920P0"	"L-xylulose reductase OS=Rattus norvegicus OX=10116 GN=Dcxr PE=1 SV=1"	"1"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"478.26932"	"1432.79340"	"1432.79572"	"-1.62"	"-0.00077"	"7/100"	"7"	"100"	"2301020.88165283"	"HCD"	"MS2"	"40.25005"	"73.5"	"100.000"	"52.3856"	"16321"	"16321"	"16294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.2"	""	"83.8"	""	"98.0"	""	"131.4"	""	"130.8"	"147.5"	""	"1023"	"40"	"37.000"	"30.000"	"0.00533145365134675"	"24"	"9.9E-05"	"0.0004903"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDPNLYR"	"[KR].aLELDPNLYR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"716.90308"	"1432.79888"	"1432.79975"	"-0.61"	"-0.00043"	"9/82"	"9"	"82"	"1264811.96563721"	"HCD"	"MS2"	"29.33255"	"59.2"	"100.000"	"101.3093"	"36095"	"36095"	"36080"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.9"	""	"40.2"	""	"57.2"	""	"150.8"	"0.3"	"154.8"	"124.0"	""	"1027"	"34"	"37.000"	"30.000"	"0.0192548636653056"	"20"	"9.9E-05"	"0.0008863"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDPNLYR"	"[KR].aLELDPNLYR.[I]"	"N-Term(TMT6plex)"	"2"	"2"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3;Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q63862; Q9JLT0"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3; Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"716.90332"	"1432.79936"	"1432.79975"	"-0.27"	"-0.00019"	"8/82"	"8"	"82"	"1017360.29522705"	"HCD"	"MS2"	"26.69297"	"47.1"	"100.000"	"101.4410"	"36174"	"36174"	"36162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"35.8"	""	"49.4"	""	"112.3"	""	"129.5"	"99.0"	""	"1008"	"35"	"37.000"	"30.000"	"0.0167660414860178"	"19"	"0.0001991"	"0.002075"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"478.27533"	"1432.81144"	"1432.81217"	"-0.52"	"-0.00025"	"8/66"	"8"	"66"	"831244.936523438"	"HCD"	"MS2"	"26.92357"	"30.4"	"100.000"	"92.3732"	"32480"	"32480"	"32457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"41.9"	""	"47.4"	""	"32.1"	""	"62.0"	"53.5"	""	"980"	"20"	"36.000"	"29.000"	"0.442788242123928"	"25"	"0.001488"	"0.01253"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"478.27542"	"1432.81171"	"1432.81217"	"-0.32"	"-0.00015"	"7/66"	"7"	"66"	"703545.84967041"	"HCD"	"MS2"	"9.609153"	"24.9"	"100.000"	"92.4298"	"32539"	"32539"	"32513"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"40.6"	""	"37.1"	""	"26.8"	""	"55.1"	"41.2"	""	"974"	"24"	"36.000"	"29.000"	"0.204422625203621"	"26"	"0.001488"	"0.0126"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"716.90985"	"1432.81243"	"1432.81217"	"0.18"	"0.00013"	"12/66"	"12"	"66"	"765539.455230713"	"HCD"	"MS2"	"35.27937"	"59.9"	"100.000"	"92.2709"	"32474"	"32474"	"32453"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.4"	""	"84.7"	""	"97.7"	""	"66.7"	""	"101.3"	"110.6"	""	"975"	"37"	"36.000"	"29.000"	"0.00926775661462609"	"26"	"0.0001686"	"0.001299"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"716.90991"	"1432.81255"	"1432.81217"	"0.26"	"0.00019"	"11/66"	"11"	"66"	"758958.817443848"	"HCD"	"MS2"	"30.64873"	"59.4"	"100.000"	"92.4820"	"32524"	"32524"	"32504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"91.8"	""	"88.2"	""	"62.6"	""	"112.3"	"124.4"	""	"1058"	"33"	"37.000"	"30.000"	"0.0262093150935734"	"24"	"0.0001686"	"0.001753"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDIMEPk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"716.90997"	"1432.81267"	"1432.81217"	"0.35"	"0.00025"	"7/66"	"7"	"66"	"312924.46307373"	"HCD"	"MS2"	"36.05229"	"26.5"	"100.000"	"92.5703"	"32596"	"32596"	"32575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.5"	""	"31.0"	""	"40.8"	""	"33.7"	"0.3"	"54.5"	"50.7"	""	"1058"	"27"	"37.000"	"30.000"	"0.109762925073365"	"23"	"0.0001686"	"0.001813"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEQLDEVK"	"[R].iEqLDEVk.[S]"	"N-Term(TMT6plex); Q3(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"3"	"716.91833"	"1432.82939"	"1432.82993"	"-0.38"	"-0.00027"	"5/74"	"5"	"74"	"283292.91809082"	"HCD"	"MS2"	"54.67589"	"22.5"	"100.000"	"88.7219"	"31046"	"31046"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.3"	""	"33.3"	""	"24.6"	""	"35.4"	""	"45.0"	"48.0"	""	"942"	"11"	"36.000"	"29.000"	"3.60596001855202"	"18"	"0.003615"	"0.03991"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEALGVGDVK"	"[K].sEALGVGDVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"716.92206"	"1432.83684"	"1432.84117"	"-3.02"	"-0.00216"	"8/86"	"8"	"86"	"1486977.4052124"	"HCD"	"MS2"	"23.35879"	"119.5"	"100.000"	"64.2367"	"21132"	"21132"	"21115"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.0"	""	"157.3"	""	"164.4"	""	"174.5"	""	"238.7"	"234.9"	""	"859"	"41"	"36.000"	"29.000"	"0.00333398136592023"	"21"	"9.9E-05"	"0.0004886"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEALGVGDVK"	"[K].sEALGVGDVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"716.92212"	"1432.83696"	"1432.84117"	"-2.93"	"-0.00210"	"9/86"	"9"	"86"	"1449289.55310059"	"HCD"	"MS2"	"0"	"108.1"	"100.000"	"63.9562"	"20987"	"20987"	"20970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.1"	""	"138.8"	""	"137.3"	""	"172.1"	"0.0"	"209.1"	"216.9"	""	"859"	"63"	"36.000"	"29.000"	"2.06045516189458E-05"	"26"	"0"	"2.161E-06"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEALGVGDVK"	"[K].sEALGVGDVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"716.92310"	"1432.83891"	"1432.84117"	"-1.57"	"-0.00113"	"9/86"	"9"	"86"	"1462321.28186035"	"HCD"	"MS2"	"17.5614"	"111.9"	"100.000"	"64.2521"	"21105"	"21105"	"21085"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.4"	""	"158.4"	""	"151.6"	""	"162.3"	""	"210.2"	"213.1"	""	"836"	"48"	"36.000"	"29.000"	"0.000637054051087267"	"20"	"0"	"5.515E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEALGVGDVK"	"[K].sEALGVGDVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"2"	"2"	"0.8358"	"0.0000"	"1"	"1"	"1"	"716.92328"	"1432.83928"	"1432.84117"	"-1.32"	"-0.00094"	"9/86"	"9"	"86"	"1403731.5501709"	"HCD"	"MS2"	"0"	"107.1"	"100.000"	"63.9414"	"21013"	"21013"	"20995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.3"	""	"125.4"	""	"139.8"	""	"157.0"	"2.4"	"209.5"	"226.4"	""	"856"	"67"	"36.000"	"29.000"	"8.04347597591799E-06"	"28"	"0"	"6.134E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TLLADDAQK"	"[K].tLLADDAQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"716.92334"	"1432.83940"	"1432.84117"	"-1.23"	"-0.00088"	"8/76"	"8"	"76"	"463708.730651855"	"HCD"	"MS2"	"14.55831"	"38.6"	"100.000"	"59.7069"	"19296"	"19296"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"45.2"	""	"49.0"	""	"69.4"	""	"73.3"	"76.9"	""	"856"	"20"	"36.000"	"29.000"	"0.407796758202123"	"23"	"0.0001686"	"0.001076"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"LIDAETNAK"	"[K].lIDAETNAk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"Q4KLZ6"	"Triokinase/FMN cyclase OS=Rattus norvegicus OX=10116 GN=Tkfc PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"716.92334"	"1432.83940"	"1432.84117"	"-1.23"	"-0.00088"	"8/74"	"8"	"74"	"463708.730651855"	"HCD"	"MS2"	"14.55831"	"38.6"	"100.000"	"59.7069"	"19296"	"19296"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"45.2"	""	"49.0"	""	"69.4"	""	"73.3"	"76.9"	""	"856"	"20"	"36.000"	"29.000"	"0.433954073095299"	"23"	"0.0001991"	"0.003831"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEALGVGDVK"	"[K].sEALGVGDVk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"Q2LAP6"	"Testin OS=Rattus norvegicus OX=10116 GN=Tes PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"478.28470"	"1432.83954"	"1432.84117"	"-1.13"	"-0.00054"	"8/86"	"8"	"86"	"1597384.0848999"	"HCD"	"MS2"	"42.39431"	"59.9"	"100.000"	"64.0091"	"21008"	"21008"	"20988"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.8"	""	"84.1"	""	"69.3"	""	"98.3"	""	"111.6"	"126.8"	""	"856"	"38"	"36.000"	"29.000"	"0.00605959737821631"	"24"	"0"	"0.0001434"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLADDAQK"	"[K].tLLADDAQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"716.92389"	"1432.84050"	"1432.84117"	"-0.46"	"-0.00033"	"8/76"	"8"	"76"	"852892.513916016"	"HCD"	"MS2"	"4.280941"	"70.2"	"100.000"	"59.9790"	"19373"	"19373"	"19353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.8"	""	"83.6"	""	"83.9"	""	"118.9"	""	"126.0"	"140.1"	""	"839"	"32"	"36.000"	"29.000"	"0.0253356450023392"	""	"0"	"0.000129"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQELDAASK"	"[R].lQELDAASk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"716.92395"	"1432.84062"	"1432.84117"	"-0.38"	"-0.00027"	"8/88"	"8"	"88"	"747188.61315918"	"HCD"	"MS2"	"4.736017"	"62.4"	"100.000"	"72.6245"	"24531"	"24531"	"24510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"64.6"	""	"70.0"	""	"130.7"	"1.0"	"117.7"	"133.8"	""	"839"	"42"	"36.000"	"29.000"	"0.00268987417377475"	"26"	"0"	"5.126E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQELDAASK"	"[R].lQELDAASk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"716.92395"	"1432.84062"	"1432.84117"	"-0.38"	"-0.00027"	"8/88"	"8"	"88"	"536417.338134766"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"72.1571"	"24312"	"24312"	"24288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"40.9"	""	"43.9"	""	"86.4"	""	"80.7"	"81.2"	""	"839"	"33"	"36.000"	"29.000"	"0.022015672957478"	"25"	"0"	"8.244E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLADDAQK"	"[K].tLLADDAQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"716.92413"	"1432.84099"	"1432.84117"	"-0.12"	"-0.00009"	"8/76"	"8"	"76"	"460675.361999512"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"60.3059"	"19506"	"19506"	"19480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.7"	""	"47.3"	""	"51.0"	""	"67.6"	"0.1"	"87.6"	"97.0"	""	"836"	"54"	"36.000"	"29.000"	"0.000174653093258288"	"25"	"0"	"6.958E-06"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VESSVPQTK"	"[R].vESSVPQTk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Y1S1"	"Myeloid differentiation primary response protein MyD88 OS=Rattus norvegicus OX=10116 GN=Myd88 PE=2 SV=2"	"Q6Y1S1"	"Myeloid differentiation primary response protein MyD88 OS=Rattus norvegicus OX=10116 GN=Myd88 PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"716.92419"	"1432.84111"	"1432.84117"	"-0.04"	"-0.00003"	"9/80"	"9"	"80"	"293714.645874023"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"42.6810"	"12382"	"12382"	"12351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"27.0"	""	"33.6"	""	"42.9"	"1.2"	"49.5"	"46.7"	""	"836"	"25"	"36.000"	"29.000"	"0.12594365181098"	"19"	"0.0008247"	"0.007568"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQELDAASK"	"[R].lQELDAASk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"716.92426"	"1432.84123"	"1432.84117"	"0.05"	"0.00003"	"8/88"	"8"	"88"	"614086.657348633"	"HCD"	"MS2"	"9.60535"	"45.3"	"100.000"	"72.2951"	"24398"	"24398"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.0"	""	"54.1"	""	"55.7"	""	"87.3"	""	"91.1"	"91.8"	""	"838"	"42"	"36.000"	"29.000"	"0.00291886509412412"	"26"	"0"	"2.736E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQELDAASK"	"[R].lQELDAASk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"P08082"	"Clathrin light chain B OS=Rattus norvegicus OX=10116 GN=Cltb PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"716.92432"	"1432.84136"	"1432.84117"	"0.13"	"0.00010"	"8/88"	"8"	"88"	"890721.852172852"	"HCD"	"MS2"	"7.100059"	"63.8"	"100.000"	"72.4612"	"24435"	"24435"	"24416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.2"	""	"67.6"	""	"76.3"	""	"112.0"	"1.7"	"128.6"	"146.0"	""	"837"	"45"	"36.000"	"29.000"	"0.00127554405315931"	"27"	"0"	"8.685E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLADDAQK"	"[K].tLLADDAQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"716.92438"	"1432.84148"	"1432.84117"	"0.22"	"0.00016"	"14/76"	"14"	"76"	"843868.106811523"	"HCD"	"MS2"	"0"	"72.8"	"100.000"	"60.0110"	"19419"	"19419"	"19397"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.3"	""	"81.2"	""	"81.9"	""	"125.7"	""	"141.4"	"160.0"	""	"837"	"44"	"36.000"	"29.000"	"0.00164700706578243"	"29"	"0"	"0.0001126"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMTMPDIR"	"[K].vPEmTMPDIR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"717.36932"	"1433.73137"	"1433.73299"	"-1.13"	"-0.00081"	"14/82"	"14"	"82"	"338353.125061035"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"70.9027"	"23805"	"23805"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"20.6"	""	"27.6"	""	"22.9"	""	"29.3"	"38.8"	""	"718"	"34"	"35.000"	"28.000"	"0.0130045236431595"	"18"	"0.0001991"	"0.005622"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPEMTMPDIR"	"[K].vPEmTMPDIR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"717.37012"	"1433.73296"	"1433.73299"	"-0.02"	"-0.00002"	"7/82"	"7"	"82"	"347293.741271973"	"HCD"	"MS2"	"11.20046"	"18.2"	"100.000"	"70.8932"	"23833"	"23833"	"23813"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"22.3"	""	"28.6"	""	"23.9"	""	"32.8"	"39.0"	""	"728"	"28"	"35.000"	"28.000"	"0.058627501120489"	"14"	"0.006958"	"0.08719"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"717.38483"	"1433.76238"	"1433.76198"	"0.28"	"0.00020"	"6/94"	"6"	"94"	"291877.312194824"	"HCD"	"MS2"	"48.95296"	"21.3"	"100.000"	"88.8857"	"31113"	"31113"	"31084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.1"	""	"27.9"	""	"32.6"	""	"29.7"	""	"38.1"	"45.4"	""	"937"	"19"	"36.000"	"29.000"	"0.53175256714248"	"23"	"0.0001991"	"0.005129"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLR"	"[R].mSVEADINGLR.[R]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"717.38660"	"1433.76592"	"1433.76198"	"2.75"	"0.00197"	"5/94"	"5"	"94"	"342560.649475098"	"HCD"	"MS2"	"32.56444"	"23.6"	"100.000"	"88.9606"	"31104"	"31104"	"31073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"30.2"	""	"29.7"	""	"32.6"	"0.3"	"43.7"	"55.7"	""	"918"	"20"	"36.000"	"29.000"	"0.480632003555362"	"21"	"0.0007633"	"0.00754"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSTVSEQR"	"[K].gIIDSTVSEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"717.39221"	"1433.77715"	"1433.77974"	"-1.81"	"-0.00130"	"8/92"	"8"	"92"	"729684.815856934"	"HCD"	"MS2"	"55.40728"	"51.2"	"100.000"	"50.5139"	"15564"	"15564"	"15539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.6"	""	"56.9"	""	"56.4"	""	"101.9"	""	"103.8"	"108.3"	""	"1024"	"17"	"37.000"	"30.000"	"1.07465722041524"	"17"	"0.0001991"	"0.004549"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIIDSTVSEQR"	"[K].gIIDSTVSEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"717.39258"	"1433.77788"	"1433.77974"	"-1.30"	"-0.00093"	"9/92"	"9"	"92"	"820384.984863281"	"HCD"	"MS2"	"51.57141"	"58.7"	"100.000"	"50.8854"	"15681"	"15681"	"15653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.5"	""	"53.0"	""	"64.4"	""	"117.1"	"2.4"	"126.4"	"124.3"	""	"1042"	"42"	"37.000"	"30.000"	"0.0029433216387721"	"21"	"0"	"1.904E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNNPWESK"	"[K].tNNPWESk.[W]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11608"	"ATP synthase protein 8 OS=Rattus norvegicus OX=10116 GN=Mt-atp8 PE=1 SV=2"	"P11608"	"ATP synthase protein 8 OS=Rattus norvegicus OX=10116 GN=Mt-atp8 PE=1 SV=2"	"0"	"2"	"2"	"0.4571"	"0.0000"	"1"	"1"	"1"	"717.39301"	"1433.77873"	"1433.77890"	"-0.12"	"-0.00008"	"12/80"	"12"	"80"	"621018.617431641"	"HCD"	"MS2"	"0"	"64.1"	"100.000"	"53.3360"	"16675"	"16675"	"16650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.7"	""	"70.7"	""	"100.3"	""	"99.0"	""	"125.0"	"133.4"	""	"1035"	"35"	"37.000"	"30.000"	"0.016862049276854"	""	"9.9E-05"	"0.0006487"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"717.40320"	"1433.79912"	"1433.80003"	"-0.63"	"-0.00045"	"8/88"	"8"	"88"	"926203.613830566"	"HCD"	"MS2"	"0"	"81.9"	"100.000"	"35.1029"	"9315"	"9315"	"9294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.1"	""	"118.7"	""	"107.5"	""	"145.9"	"1.4"	"137.1"	"105.9"	""	"1061"	"54"	"37.000"	"30.000"	"0.000200763791192418"	""	"0"	"3.492E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"717.40344"	"1433.79961"	"1433.80003"	"-0.29"	"-0.00021"	"13/88"	"13"	"88"	"1185040.73754883"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"35.5093"	"9441"	"9441"	"9422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.8"	""	"129.7"	""	"149.3"	""	"170.4"	""	"195.7"	"182.5"	""	"1059"	"45"	"37.000"	"30.000"	"0.00156266528551985"	"28"	"0"	"4.637E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"717.40381"	"1433.80034"	"1433.80003"	"0.22"	"0.00016"	"8/88"	"8"	"88"	"750515.063110352"	"HCD"	"MS2"	"100"	"72.6"	"100.000"	"35.2110"	"9321"	"9321"	"9301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.0"	""	"92.5"	""	"106.3"	""	"130.6"	""	"142.3"	"107.3"	""	"1055"	"26"	"37.000"	"30.000"	"0.12595704517367"	"25"	"0"	"7.81E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESNAELK"	"[K].nAESNAELk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"717.40399"	"1433.80071"	"1433.80003"	"0.47"	"0.00034"	"13/88"	"13"	"88"	"839335.388671875"	"HCD"	"MS2"	"0"	"77.6"	"100.000"	"35.4174"	"9441"	"9441"	"9421"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.6"	""	"101.4"	""	"118.3"	""	"122.3"	""	"151.3"	"127.7"	""	"1054"	"45"	"37.000"	"30.000"	"0.00166268743651843"	""	"0"	"0.0001023"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].aMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"717.41199"	"1433.81670"	"1433.81866"	"-1.37"	"-0.00098"	"16/76"	"16"	"76"	"457597.544677734"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"50.0822"	"15353"	"15353"	"15324"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.3"	""	"46.3"	""	"51.0"	""	"58.4"	"0.1"	"88.1"	"96.7"	""	"1041"	"64"	"37.000"	"30.000"	"2.18988210074103E-05"	"24"	"0"	"0.0003571"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].aMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"478.61084"	"1433.81797"	"1433.81866"	"-0.48"	"-0.00023"	"13/76"	"13"	"76"	"2156375.71380615"	"HCD"	"MS2"	"64.22574"	"77.5"	"100.000"	"49.8350"	"15287"	"15287"	"15260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.0"	""	"103.1"	""	"109.5"	""	"92.9"	""	"139.9"	"185.7"	""	"1013"	"43"	"37.000"	"30.000"	"0.00256790793741138"	"23"	"9.9E-05"	"0.0007154"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].aMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"478.61099"	"1433.81842"	"1433.81866"	"-0.16"	"-0.00008"	"13/76"	"13"	"76"	"2496017.61853027"	"HCD"	"MS2"	"28.02399"	"87.9"	"100.000"	"50.2941"	"15439"	"15439"	"15414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.8"	""	"121.0"	""	"122.0"	""	"111.1"	"1.7"	"164.4"	"201.2"	""	"1013"	"46"	"37.000"	"30.000"	"0.00139180838854636"	"26"	"0.0001991"	"0.005586"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].aMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"717.41290"	"1433.81853"	"1433.81866"	"-0.09"	"-0.00006"	"9/76"	"9"	"76"	"541516.809753418"	"HCD"	"MS2"	"6.573942"	"46.5"	"100.000"	"50.0608"	"15379"	"15379"	"15355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.0"	""	"49.7"	""	"62.8"	""	"58.7"	""	"83.5"	"113.5"	""	"1013"	"70"	"37.000"	"30.000"	"5.54088899516816E-06"	"24"	"0"	"5.715E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].aMEAVAAQGk.[AV]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"717.41302"	"1433.81877"	"1433.81866"	"0.08"	"0.00006"	"18/76"	"18"	"76"	"521127.54699707"	"HCD"	"MS2"	"8.071168"	"45.5"	"100.000"	"50.4162"	"15489"	"15489"	"15462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.6"	""	"51.1"	""	"61.8"	""	"56.1"	"1.0"	"86.5"	"118.1"	""	"1002"	"72"	"36.000"	"30.000"	"3.40281019941209E-06"	"27"	"0"	"2.813E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].LADLPGNYITk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"717.41400"	"1433.82073"	"1433.82015"	"0.40"	"0.00029"	"7/102"	"7"	"102"	"358829.575927734"	"HCD"	"MS2"	"0"	"19.6"	"100.000"	"86.5619"	"30140"	"30140"	"30127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"31.9"	""	"21.8"	""	"31.0"	""	"37.8"	"34.1"	""	"1002"	"50"	"36.000"	"30.000"	"0.000451687139940584"	"17"	"0.0001991"	"0.003539"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].LADLPGNYITk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"717.41486"	"1433.82244"	"1433.82015"	"1.60"	"0.00114"	"7/102"	"7"	"102"	"256325.601379395"	"HCD"	"MS2"	"14.57031"	"15.6"	"100.000"	"86.2915"	"30066"	"30066"	"30043"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.6"	""	"29.1"	""	"16.4"	""	"23.6"	""	"26.8"	"29.5"	""	"1007"	"57"	"37.000"	"30.000"	"0.000101157823114849"	"23"	"0.0001686"	"0.001558"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LADLPGNYITK"	"[R].LADLPGNYITk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"717.41504"	"1433.82280"	"1433.82015"	"1.85"	"0.00133"	"6/102"	"6"	"102"	"171187.422729492"	"HCD"	"MS2"	"18.49098"	"11.9"	"100.000"	"86.2783"	"30029"	"30029"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"16.3"	""	"15.4"	""	"21.2"	""	"20.7"	"22.8"	""	"1006"	"43"	"37.000"	"30.000"	"0.00255604199607962"	"16"	"0.0001991"	"0.004388"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"3"	"3"	"0.2083"	"0.0000"	"1"	"1"	"1"	"478.61267"	"1433.82346"	"1433.82518"	"-1.20"	"-0.00057"	"8/74"	"8"	"74"	"2100827.57489014"	"HCD"	"MS2"	"34.69103"	"77.7"	"100.000"	"58.6367"	"18862"	"18862"	"18839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.1"	""	"90.4"	""	"98.1"	""	"140.5"	"1.0"	"149.9"	"145.1"	""	"1023"	"24"	"37.000"	"30.000"	"0.209819398677649"	""	"0.002084"	"0.01871"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"717.41559"	"1433.82390"	"1433.82518"	"-0.89"	"-0.00064"	"12/74"	"12"	"74"	"447030.118530273"	"HCD"	"MS2"	"39.63264"	"40.7"	"100.000"	"66.9523"	"22201"	"22201"	"22176"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.9"	""	"43.7"	""	"57.6"	""	"72.2"	""	"82.5"	"68.7"	""	"1006"	"34"	"37.000"	"30.000"	"0.0191235266349242"	"25"	"0"	"0.0001466"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3111"	"0.0000"	"1"	"1"	"1"	"717.41589"	"1433.82451"	"1433.82518"	"-0.47"	"-0.00034"	"14/74"	"14"	"74"	"2205749.54821777"	"HCD"	"MS2"	"3.979206"	"177.0"	"100.000"	"58.9820"	"18967"	"18967"	"18949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.0"	""	"175.5"	""	"206.5"	""	"333.8"	""	"347.2"	"357.5"	""	"1003"	"45"	"37.000"	"30.000"	"0.00158588224657444"	""	"9.9E-05"	"0.000623"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"478.61304"	"1433.82456"	"1433.82518"	"-0.43"	"-0.00021"	"6/74"	"6"	"74"	"2157949.24200439"	"HCD"	"MS2"	"22.91017"	"78.9"	"100.000"	"58.9153"	"18940"	"18940"	"18917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.1"	""	"90.9"	""	"107.2"	""	"135.0"	""	"139.2"	"155.1"	""	"1003"	"26"	"37.000"	"30.000"	"0.125103925556189"	""	"0.001951"	"0.0172"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.4242"	"0.0000"	"1"	"1"	"1"	"717.41595"	"1433.82463"	"1433.82518"	"-0.38"	"-0.00027"	"11/74"	"11"	"74"	"713891.650268555"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"67.3332"	"22387"	"22387"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.1"	""	"74.2"	""	"84.1"	""	"99.7"	"0.6"	"122.8"	"114.0"	""	"1003"	"33"	"37.000"	"30.000"	"0.0273068080400474"	""	"0"	"0.0002942"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"717.41602"	"1433.82475"	"1433.82518"	"-0.30"	"-0.00021"	"12/74"	"12"	"74"	"558992.051330566"	"HCD"	"MS2"	"22.98085"	"50.7"	"100.000"	"67.0248"	"22262"	"22262"	"22247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.1"	""	"60.1"	""	"59.1"	""	"88.6"	"0.6"	"102.2"	"86.2"	""	"1003"	"38"	"37.000"	"30.000"	"0.00762554586160847"	"27"	"0"	"0.0001042"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATADDLIK"	"[R].eATADDLIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"Q9ESW0"	"DNA damage-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ddb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"717.41602"	"1433.82475"	"1433.82518"	"-0.30"	"-0.00021"	"12/74"	"12"	"74"	"826391.507202148"	"HCD"	"MS2"	"0"	"73.5"	"100.000"	"67.2726"	"22331"	"22331"	"22311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.5"	""	"82.7"	""	"96.1"	""	"113.9"	""	"141.1"	"137.3"	""	"1003"	"34"	"37.000"	"30.000"	"0.0211480796469434"	""	"0"	"0.0002308"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3191"	"0.0000"	"1"	"1"	"1"	"717.41608"	"1433.82488"	"1433.82518"	"-0.21"	"-0.00015"	"14/74"	"14"	"74"	"1268403.03063965"	"HCD"	"MS2"	"7.061032"	"104.8"	"100.000"	"58.4847"	"18800"	"18800"	"18779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.7"	""	"103.4"	""	"124.9"	""	"220.1"	"0.4"	"186.5"	"194.6"	""	"1003"	"47"	"37.000"	"30.000"	"0.00107465963646171"	""	"9.9E-05"	"0.0006001"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.3043"	"0.0000"	"1"	"1"	"1"	"717.41620"	"1433.82512"	"1433.82518"	"-0.04"	"-0.00003"	"14/74"	"14"	"74"	"1633481.70684814"	"HCD"	"MS2"	"2.962484"	"129.3"	"100.000"	"58.7820"	"18921"	"18921"	"18903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.8"	""	"118.9"	""	"136.3"	""	"250.9"	""	"242.5"	"284.3"	""	"1002"	"46"	"36.000"	"30.000"	"0.00140876231602987"	""	"9.9E-05"	"0.0007397"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSEQIEK"	"[K].eLSEQIEk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.2955"	"0.0000"	"1"	"1"	"1"	"717.41644"	"1433.82561"	"1433.82518"	"0.30"	"0.00021"	"14/74"	"14"	"74"	"829662.585083008"	"HCD"	"MS2"	"24.38148"	"70.9"	"100.000"	"58.6942"	"18850"	"18850"	"18826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.4"	""	"65.5"	""	"83.2"	""	"136.1"	"0.0"	"138.3"	"134.3"	""	"1013"	"44"	"37.000"	"30.000"	"0.00185600631559127"	""	"9.9E-05"	"0.0005054"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQTSDVNK"	"[K].lAQTSDVNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"717.42163"	"1433.83599"	"1433.83641"	"-0.30"	"-0.00021"	"8/80"	"8"	"80"	"527226.260009766"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"43.9038"	"12846"	"12846"	"12825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.9"	""	"51.6"	""	"65.6"	""	"85.8"	""	"83.6"	"93.1"	""	"905"	"41"	"36.000"	"29.000"	"0.00338546698981298"	"22"	"0"	"0.0001251"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQTSDVNK"	"[K].lAQTSDVNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"Q99N37"	"Rho GTPase-activating protein 17 OS=Rattus norvegicus OX=10116 GN=Arhgap17 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"717.42188"	"1433.83647"	"1433.83641"	"0.04"	"0.00003"	"8/80"	"8"	"80"	"418226.389465332"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"43.7595"	"12823"	"12823"	"12794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.0"	""	"47.0"	""	"51.9"	""	"50.5"	"0.0"	"71.2"	"75.9"	""	"899"	"42"	"36.000"	"29.000"	"0.00304599857670999"	"23"	"0"	"3.122E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSDDTALK"	"[K].iLSDDTALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"717.43347"	"1433.85967"	"1433.86157"	"-1.32"	"-0.00095"	"7/70"	"7"	"70"	"289476.071716309"	"HCD"	"MS2"	"38.40286"	"24.1"	"100.000"	"87.8508"	"30693"	"30693"	"30665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.8"	""	"27.2"	""	"24.9"	""	"47.0"	"1.0"	"53.8"	"49.8"	""	"716"	"39"	"35.000"	"28.000"	"0.00470850489924821"	"22"	"0.0003938"	"0.006304"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSDDTALK"	"[K].iLSDDTALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"717.43427"	"1433.86125"	"1433.86157"	"-0.22"	"-0.00016"	"14/70"	"14"	"70"	"281955.090026855"	"HCD"	"MS2"	"30.04718"	"22.9"	"100.000"	"87.9695"	"30704"	"30704"	"30686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"24.2"	""	"26.2"	""	"46.5"	"0.5"	"49.2"	"44.0"	""	"679"	"50"	"35.000"	"28.000"	"0.000313212999519042"	"25"	"0"	"1.44E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSDDTALK"	"[K].iLSDDTALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"717.43427"	"1433.86125"	"1433.86157"	"-0.22"	"-0.00016"	"16/70"	"16"	"70"	"705423.848571777"	"HCD"	"MS2"	"17.29489"	"61.0"	"100.000"	"88.2512"	"30816"	"30816"	"30802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.6"	""	"53.9"	""	"71.3"	""	"122.2"	""	"133.4"	"135.0"	""	"679"	"60"	"35.000"	"28.000"	"3.17570226373094E-05"	""	"0"	"4.732E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSDDTALK"	"[K].iLSDDTALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.8254"	"0.0000"	"1"	"1"	"1"	"717.43439"	"1433.86150"	"1433.86157"	"-0.05"	"-0.00003"	"16/70"	"16"	"70"	"793991.765441895"	"HCD"	"MS2"	"13.72136"	"66.8"	"100.000"	"88.1643"	"30820"	"30820"	"30799"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.0"	""	"62.4"	""	"82.1"	""	"138.6"	""	"134.0"	"145.4"	""	"679"	"63"	"35.000"	"28.000"	"1.77762348220862E-05"	"28"	"0"	"2.297E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSDDTALK"	"[K].iLSDDTALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"717.43445"	"1433.86162"	"1433.86157"	"0.04"	"0.00003"	"10/70"	"10"	"70"	"272954.092041016"	"HCD"	"MS2"	"36.88918"	"21.1"	"100.000"	"88.5367"	"30931"	"30931"	"30914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"21.7"	""	"25.3"	""	"41.5"	""	"42.3"	"50.4"	""	"681"	"24"	"35.000"	"28.000"	"0.142599208922651"	"22"	"0.002525"	"0.02423"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSDDTALK"	"[K].iLSDDTALk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"717.43481"	"1433.86235"	"1433.86157"	"0.55"	"0.00039"	"12/70"	"12"	"70"	"285029.493286133"	"HCD"	"MS2"	"39.67996"	"23.2"	"100.000"	"88.4705"	"30944"	"30944"	"30928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"22.8"	""	"31.2"	""	"40.6"	""	"53.6"	"40.6"	""	"679"	"22"	"35.000"	"28.000"	"0.197624042433211"	"22"	"0.0005161"	"0.006569"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDAQFGGIDQR"	"[K].vDAQFGGIDQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"717.87958"	"1434.75188"	"1434.75386"	"-1.38"	"-0.00099"	"9/108"	"9"	"108"	"673545.129455566"	"HCD"	"MS2"	"6.971241"	"45.6"	"100.000"	"65.7189"	"21703"	"21703"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.8"	""	"69.4"	""	"66.3"	""	"57.8"	"0.3"	"83.2"	"82.9"	""	"818"	"60"	"36.000"	"29.000"	"3.90591967682767E-05"	"27"	"0"	"1.761E-06"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDAQFGGIDQR"	"[K].vDAQFGGIDQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"717.88031"	"1434.75334"	"1434.75386"	"-0.36"	"-0.00026"	"8/108"	"8"	"108"	"483293.516601563"	"HCD"	"MS2"	"36.90532"	"38.7"	"100.000"	"66.0196"	"21859"	"21859"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.1"	""	"46.5"	""	"46.7"	""	"66.7"	"1.7"	"69.9"	"79.0"	""	"829"	"33"	"36.000"	"29.000"	"0.022259967959547"	"24"	"0"	"0.0002989"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDAQFGGIDQR"	"[K].vDAQFGGIDQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"717.88092"	"1434.75456"	"1434.75386"	"0.49"	"0.00035"	"8/108"	"8"	"108"	"403411.129516602"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"65.6373"	"21703"	"21703"	"21680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.9"	""	"41.2"	""	"43.8"	""	"47.9"	"1.5"	"56.0"	"56.9"	""	"887"	"48"	"36.000"	"29.000"	"0.000765409105097654"	"23"	"0"	"2.405E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"717.89197"	"1434.77666"	"1434.77901"	"-1.64"	"-0.00118"	"7/92"	"7"	"92"	"606153.373046875"	"HCD"	"MS2"	"7.933355"	"27.3"	"100.000"	"87.3355"	"30449"	"30449"	"30433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.2"	""	"33.3"	""	"31.2"	""	"51.0"	"0.8"	"51.4"	"49.9"	""	"981"	"46"	"36.000"	"29.000"	"0.00115781457337507"	""	"0"	"7.129E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"717.89270"	"1434.77812"	"1434.77901"	"-0.62"	"-0.00044"	"6/92"	"6"	"92"	"258335.464355469"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"87.0284"	"30326"	"30326"	"30302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"19.5"	""	"20.7"	""	"21.7"	""	"31.8"	"25.8"	""	"993"	"26"	"36.000"	"29.000"	"0.121595989957592"	"23"	"0.0001991"	"0.002594"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"717.89313"	"1434.77898"	"1434.77901"	"-0.02"	"-0.00002"	"8/92"	"8"	"92"	"461758.125732422"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"87.3853"	"30504"	"30504"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"28.7"	""	"28.1"	""	"38.7"	""	"47.3"	"39.3"	""	"1010"	"54"	"37.000"	"30.000"	"0.000189797889165664"	""	"0"	"0.0001116"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"717.89362"	"1434.77995"	"1434.77901"	"0.66"	"0.00047"	"7/92"	"7"	"92"	"439237.101867676"	"HCD"	"MS2"	"12.92777"	"21.3"	"100.000"	"87.0554"	"30371"	"30371"	"30350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"26.2"	""	"28.2"	""	"33.5"	""	"41.8"	"46.3"	""	"1001"	"39"	"36.000"	"30.000"	"0.00655245552461203"	"28"	"0"	"0.000108"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILGASDPYVR"	"[K].dILGASDPYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"717.89410"	"1434.78093"	"1434.77901"	"1.34"	"0.00096"	"6/92"	"6"	"92"	"161095.609680176"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"87.6260"	"30566"	"30566"	"30546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"12.6"	""	"16.3"	""	"19.1"	""	"23.6"	"20.6"	""	"1012"	"26"	"37.000"	"30.000"	"0.12278647081117"	"22"	"0.0001991"	"0.003041"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEPVPAQYVR"	"[R].fEPVPAQYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35276"	"Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1"	"O35276"	"Neuropilin-2 OS=Rattus norvegicus OX=10116 GN=Nrp2 PE=2 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"717.89905"	"1434.79082"	"1434.79427"	"-2.40"	"-0.00172"	"4/78"	"4"	"78"	"124567.814147949"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"85.5099"	"29751"	"29751"	"29724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.9"	""	"10.9"	""	"13.3"	""	"18.3"	"1.7"	"22.7"	"18.5"	""	"1008"	"11"	"37.000"	"30.000"	"3.90328746092469"	"20"	"0.003317"	"0.03644"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDVGGLWK"	"[R].sDDVGGLWk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"478.93750"	"1434.79795"	"1434.79930"	"-0.94"	"-0.00045"	"6/68"	"6"	"68"	"728610.087768555"	"HCD"	"MS2"	"39.93169"	"27.6"	"100.000"	"89.3901"	"31275"	"31275"	"31260"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.2"	"3.2"	"38.4"	""	"43.5"	""	"36.1"	""	"57.7"	"46.0"	""	"1040"	"31"	"37.000"	"30.000"	"0.044055825535311"	"23"	"0.001488"	"0.01219"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDVGGLWK"	"[R].sDDVGGLWk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.7818"	"0.0000"	"1"	"1"	"1"	"717.90295"	"1434.79863"	"1434.79930"	"-0.47"	"-0.00033"	"8/68"	"8"	"68"	"1209309.88433838"	"HCD"	"MS2"	"0"	"110.1"	"100.000"	"89.5218"	"31327"	"31327"	"31319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.0"	""	"147.4"	""	"150.3"	""	"173.8"	""	"211.7"	"233.9"	""	"1025"	"55"	"37.000"	"30.000"	"0.000160580893371174"	"28"	"0"	"7.725E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDVGGLWK"	"[R].sDDVGGLWk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"717.90308"	"1434.79888"	"1434.79930"	"-0.30"	"-0.00021"	"8/68"	"8"	"68"	"628934.9921875"	"HCD"	"MS2"	"26.92912"	"60.1"	"100.000"	"89.1581"	"31222"	"31222"	"31201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.3"	""	"88.5"	""	"83.0"	""	"93.2"	""	"107.5"	"121.0"	""	"1019"	"52"	"37.000"	"30.000"	"0.000301400652612404"	""	"0"	"7.912E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDVGGLWK"	"[R].sDDVGGLWk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"717.90320"	"1434.79912"	"1434.79930"	"-0.13"	"-0.00009"	"8/68"	"8"	"68"	"564397.515258789"	"HCD"	"MS2"	"29.03637"	"53.9"	"100.000"	"89.2401"	"31215"	"31215"	"31202"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.9"	""	"80.0"	""	"85.7"	""	"87.1"	""	"100.4"	"91.8"	""	"1023"	"54"	"37.000"	"30.000"	"0.000182324754747524"	""	"0"	"2.831E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDVGGLWK"	"[R].sDDVGGLWk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6909"	"0.0000"	"1"	"1"	"1"	"717.90344"	"1434.79961"	"1434.79930"	"0.21"	"0.00015"	"8/68"	"8"	"68"	"1157119.06671143"	"HCD"	"MS2"	"0"	"102.9"	"100.000"	"89.4539"	"31340"	"31340"	"31324"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.2"	""	"137.1"	""	"149.2"	""	"163.4"	""	"203.4"	"199.9"	""	"1028"	"55"	"37.000"	"30.000"	"0.000163667752616723"	""	"0"	"3.39E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSTSVLSEVR"	"[R].dLSTSVLSEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"717.90387"	"1434.80046"	"1434.80014"	"0.23"	"0.00016"	"9/96"	"9"	"96"	"273586.748901367"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"95.0212"	"33548"	"33548"	"33530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"16.7"	""	"18.4"	""	"32.5"	"0.4"	"46.5"	"37.9"	""	"1018"	"61"	"37.000"	"30.000"	"3.61175083893365E-05"	"25"	"0"	"9.587E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSTSVLSEVR"	"[R].dLSTSVLSEVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"Q6AYC2"	"Immunity-related GTPase family M protein OS=Rattus norvegicus OX=10116 GN=Irgm PE=2 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"717.90515"	"1434.80303"	"1434.80014"	"2.01"	"0.00144"	"6/96"	"6"	"96"	"233589.623535156"	"HCD"	"MS2"	"11.7533"	"16.0"	"100.000"	"95.0971"	"33612"	"33612"	"33591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"17.3"	""	"16.5"	""	"24.7"	""	"37.7"	"36.8"	""	"1061"	"20"	"37.000"	"30.000"	"0.477183467001684"	"23"	"0.0001991"	"0.00325"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTADGSSILDR"	"[K].aTTADGSSILDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"718.38263"	"1435.75798"	"1435.75900"	"-0.71"	"-0.00051"	"9/106"	"9"	"106"	"480077.151428223"	"HCD"	"MS2"	"0"	"39.3"	"100.000"	"48.6837"	"14820"	"14820"	"14801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.9"	""	"38.0"	""	"46.5"	""	"71.4"	""	"84.4"	"83.4"	""	"938"	"23"	"36.000"	"29.000"	"0.218359877862268"	"20"	"0.002189"	"0.02114"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATTADGSSILDR"	"[K].aTTADGSSILDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"Q68FS2"	"COP9 signalosome complex subunit 4 OS=Rattus norvegicus OX=10116 GN=Cops4 PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"718.38428"	"1435.76128"	"1435.75900"	"1.58"	"0.00114"	"7/106"	"7"	"106"	"334682.176757813"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"49.0482"	"14932"	"14932"	"14910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.0"	""	"37.7"	""	"39.7"	""	"55.5"	""	"61.4"	"54.6"	""	"955"	"17"	"36.000"	"29.000"	"0.995344396678956"	"19"	"0.004672"	"0.05474"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"718.39661"	"1435.78594"	"1435.78669"	"-0.52"	"-0.00038"	"12/64"	"12"	"64"	"1770884.24932861"	"HCD"	"MS2"	"0"	"153.4"	"100.000"	"75.8094"	"25827"	"25827"	"25809"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"267.4"	""	"199.7"	""	"217.2"	""	"218.6"	""	"266.8"	"282.7"	""	"1064"	"30"	"37.000"	"30.000"	"0.0536922535392796"	"23"	"0.0001991"	"0.0023"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"718.39685"	"1435.78642"	"1435.78669"	"-0.18"	"-0.00013"	"12/64"	"12"	"64"	"1370034.76690674"	"HCD"	"MS2"	"3.528858"	"115.7"	"100.000"	"75.4963"	"25699"	"25699"	"25681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"191.7"	""	"151.2"	""	"160.4"	""	"173.8"	"1.6"	"216.7"	"200.3"	""	"1063"	"31"	"37.000"	"30.000"	"0.0406914596573333"	"26"	"0.0001686"	"0.001815"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"718.39703"	"1435.78679"	"1435.78669"	"0.07"	"0.00005"	"7/64"	"7"	"64"	"358487.085266113"	"HCD"	"MS2"	"22.20812"	"38.3"	"100.000"	"75.2025"	"25549"	"25549"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.9"	""	"48.5"	""	"55.2"	""	"53.2"	"0.1"	"79.8"	"69.7"	""	"1062"	"22"	"37.000"	"30.000"	"0.351636963465636"	"23"	"0.0001991"	"0.002221"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"718.39703"	"1435.78679"	"1435.78669"	"0.07"	"0.00005"	"5/64"	"5"	"64"	"1160840.02703857"	"HCD"	"MS2"	"1.988872"	"106.4"	"100.000"	"75.7943"	"25789"	"25789"	"25771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.2"	""	"147.1"	""	"140.5"	""	"140.9"	"0.7"	"201.9"	"200.8"	""	"1062"	"32"	"37.000"	"30.000"	"0.0366517335839169"	""	"0.0001991"	"0.00214"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDMENk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"718.39716"	"1435.78703"	"1435.78669"	"0.24"	"0.00017"	"7/64"	"7"	"64"	"2112892.00323486"	"HCD"	"MS2"	"1.781582"	"179.6"	"100.000"	"75.4859"	"25664"	"25664"	"25647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.2"	""	"223.2"	""	"247.2"	""	"240.1"	"1.0"	"332.4"	"353.4"	""	"1093"	"31"	"37.000"	"30.000"	"0.0432105870201905"	"23"	"0.0001991"	"0.002169"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDSYTLHK"	"[R].nDSYTLHk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"479.26898"	"1435.79239"	"1435.79455"	"-1.50"	"-0.00072"	"6/76"	"6"	"76"	"3381608.1348877"	"HCD"	"MS2"	"11.14757"	"140.5"	"100.000"	"38.4868"	"10649"	"10649"	"10626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.6"	""	"159.6"	""	"185.0"	""	"244.4"	"0.7"	"280.3"	"274.6"	""	"1059"	"34"	"37.000"	"30.000"	"0.0194475978113736"	"27"	"0.0001686"	"0.001485"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDSYTLHK"	"[R].nDSYTLHk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"P62198"	"26S proteasome regulatory subunit 8 OS=Rattus norvegicus OX=10116 GN=Psmc5 PE=1 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"479.26935"	"1435.79349"	"1435.79455"	"-0.74"	"-0.00035"	"6/76"	"6"	"76"	"3064796.3494873"	"HCD"	"MS2"	"15.62949"	"122.5"	"100.000"	"38.3994"	"10649"	"10649"	"10628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.4"	""	"143.2"	""	"160.1"	""	"202.4"	"1.5"	"252.5"	"235.4"	""	"1085"	"34"	"37.000"	"30.000"	"0.0201557861785216"	"28"	"0.0001991"	"0.002142"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTPMQSAAK"	"[K].sGTPMQSAAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"O08662"	"Phosphatidylinositol 4-kinase alpha OS=Rattus norvegicus OX=10116 GN=Pi4ka PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"718.40131"	"1435.79534"	"1435.79792"	"-1.80"	"-0.00129"	"6/92"	"6"	"92"	"166787.075439453"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"34.5593"	"9059"	"9059"	"9031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"20.6"	""	"20.1"	""	"19.4"	""	"27.3"	"31.1"	""	"1072"	"30"	"37.000"	"30.000"	"0.0598638700810381"	"20"	"0.001951"	"0.01702"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTTPYVR"	"[K].lEDLTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"479.27075"	"1435.79770"	"1435.79941"	"-1.19"	"-0.00057"	"9/80"	"9"	"80"	"508643.046875"	"HCD"	"MS2"	"59.36474"	"13.9"	"100.000"	"98.3397"	"34892"	"34892"	"34871"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	"2.7"	"21.1"	""	"20.9"	""	"20.7"	""	"24.8"	"24.1"	""	"1037"	"23"	"37.000"	"30.000"	"0.284936943095178"	"21"	"0.0001686"	"0.001393"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTTPYVR"	"[K].lEDLTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"718.40314"	"1435.79900"	"1435.79941"	"-0.29"	"-0.00021"	"7/80"	"7"	"80"	"486575.014099121"	"HCD"	"MS2"	"16.67157"	"29.0"	"100.000"	"98.1645"	"34821"	"34821"	"34801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"62.3"	""	"30.8"	""	"54.4"	""	"45.3"	"39.1"	""	"1049"	"37"	"37.000"	"30.000"	"0.0115809848246841"	"29"	"9.9E-05"	"0.0007912"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTTPYVR"	"[K].lEDLTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"718.40344"	"1435.79961"	"1435.79941"	"0.14"	"0.00010"	"6/80"	"6"	"80"	"681442.117248535"	"HCD"	"MS2"	"3.355176"	"35.7"	"100.000"	"98.4735"	"34946"	"34946"	"34927"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.3"	""	"70.7"	""	"32.2"	""	"78.4"	"0.8"	"65.3"	"38.8"	""	"1052"	"48"	"37.000"	"30.000"	"0.000933223666948228"	""	"0"	"0.0003911"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTTPYVR"	"[K].lEDLTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"718.40356"	"1435.79985"	"1435.79941"	"0.31"	"0.00022"	"7/80"	"7"	"80"	"916219.532836914"	"HCD"	"MS2"	"0"	"45.4"	"100.000"	"98.4534"	"34968"	"34968"	"34951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.1"	""	"90.9"	""	"52.9"	""	"99.4"	""	"80.2"	"47.9"	""	"1035"	"45"	"37.000"	"30.000"	"0.00175351850802037"	""	"9.9E-05"	"0.000886"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDLTTPYVR"	"[K].lEDLTTPYVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"0.3947"	"0.0000"	"1"	"1"	"1"	"718.40369"	"1435.80010"	"1435.79941"	"0.48"	"0.00034"	"7/80"	"7"	"80"	"284994.408203125"	"HCD"	"MS2"	"36.43562"	"16.5"	"100.000"	"98.1575"	"34850"	"34850"	"34829"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"30.7"	""	"19.6"	""	"29.5"	""	"23.8"	"27.6"	""	"1034"	"39"	"37.000"	"30.000"	"0.00730281910569964"	""	"9.9E-05"	"0.0006534"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qMVETELk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"718.41437"	"1435.82146"	"1435.82307"	"-1.12"	"-0.00081"	"7/74"	"7"	"74"	"3020583.04779053"	"HCD"	"MS2"	"0"	"248.8"	"100.000"	"63.7579"	"20939"	"20939"	"20921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.4"	""	"311.8"	""	"376.7"	""	"221.4"	"0.1"	"479.6"	"556.0"	""	"930"	"43"	"36.000"	"29.000"	"0.00255536506343795"	""	"0.00212"	"0.01928"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qMVETELk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"718.41455"	"1435.82182"	"1435.82307"	"-0.87"	"-0.00062"	"7/74"	"7"	"74"	"2713562.25250244"	"HCD"	"MS2"	"3.235714"	"232.0"	"100.000"	"63.7914"	"20921"	"20921"	"20908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"366.8"	""	"284.0"	""	"334.0"	""	"226.4"	""	"453.2"	"538.1"	""	"922"	"44"	"36.000"	"29.000"	"0.00164702778388039"	""	"0.001951"	"0.01694"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qMVETELk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"718.41467"	"1435.82207"	"1435.82307"	"-0.70"	"-0.00050"	"7/74"	"7"	"74"	"1262703.2487793"	"HCD"	"MS2"	"14.06452"	"112.7"	"100.000"	"63.4859"	"20796"	"20796"	"20779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.3"	""	"141.3"	""	"166.9"	""	"110.1"	""	"205.2"	"242.2"	""	"922"	"46"	"36.000"	"29.000"	"0.00121815043712542"	""	"0.0005161"	"0.006608"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qMVETELk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"718.41473"	"1435.82219"	"1435.82307"	"-0.61"	"-0.00044"	"7/74"	"7"	"74"	"1154316.08233643"	"HCD"	"MS2"	"11.98395"	"104.4"	"100.000"	"63.4617"	"20818"	"20818"	"20798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.1"	""	"131.1"	""	"146.6"	""	"104.1"	""	"194.0"	"219.5"	""	"922"	"44"	"36.000"	"29.000"	"0.00201697690477954"	""	"0.0005778"	"0.007089"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLIEEQK"	"[R].aFLIEEQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"718.43024"	"1435.85320"	"1435.85609"	"-2.01"	"-0.00145"	"7/60"	"7"	"60"	"244408.207458496"	"HCD"	"MS2"	"36.61399"	"20.2"	"100.000"	"90.3788"	"31711"	"31711"	"31688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"19.7"	""	"27.1"	""	"33.0"	""	"49.5"	"35.6"	""	"652"	"31"	"35.000"	"28.000"	"0.0263158619861121"	"26"	"9.9E-05"	"0.0009772"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFLIEEQK"	"[R].aFLIEEQk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"P11250"	"60S ribosomal protein L34 OS=Rattus norvegicus OX=10116 GN=Rpl34 PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"718.43219"	"1435.85710"	"1435.85609"	"0.71"	"0.00051"	"6/60"	"6"	"60"	"202650.378234863"	"HCD"	"MS2"	"14.13592"	"20.8"	"100.000"	"90.4121"	"31686"	"31686"	"31667"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.3"	""	"22.7"	""	"24.0"	""	"33.9"	""	"47.4"	"42.1"	""	"627"	"25"	"34.000"	"27.000"	"0.0995950021148702"	"24"	"0.0001991"	"0.005809"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIYTGEEILR"	"[R].nIYTGEEILR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P53767"	"Vascular endothelial growth factor receptor 1 OS=Rattus norvegicus OX=10116 GN=Flt1 PE=2 SV=1"	"P53767"	"Vascular endothelial growth factor receptor 1 OS=Rattus norvegicus OX=10116 GN=Flt1 PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"718.90167"	"1436.79607"	"1436.79466"	"0.98"	"0.00070"	"7/96"	"7"	"96"	"289669.806640625"	"HCD"	"MS2"	"46.61364"	"19.4"	"100.000"	"83.3394"	"28873"	"28873"	"28848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"22.2"	""	"23.6"	""	"29.2"	""	"39.7"	"41.6"	""	"1011"	"11"	"37.000"	"30.000"	"3.81699121084877"	"17"	"0.008792"	"0.1114"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIPEFSK"	"[K].eEIPEFSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"718.90546"	"1436.80364"	"1436.80372"	"-0.06"	"-0.00004"	"7/68"	"7"	"68"	"428421.455627441"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"84.2878"	"29256"	"29256"	"29235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.7"	""	"43.9"	""	"49.1"	""	"56.3"	"0.4"	"75.3"	"60.9"	""	"983"	"31"	"36.000"	"29.000"	"0.0395843503849342"	"23"	"0.001596"	"0.01289"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIPEFSK"	"[K].eEIPEFSk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"P00388"	"NADPH--cytochrome P450 reductase OS=Rattus norvegicus OX=10116 GN=Por PE=1 SV=3"	"0"	"2"	"2"	"0.6087"	"0.0000"	"1"	"1"	"1"	"718.90546"	"1436.80364"	"1436.80372"	"-0.06"	"-0.00004"	"7/68"	"7"	"68"	"438000.662719727"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"84.2909"	"29229"	"29229"	"29209"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.9"	""	"43.9"	""	"44.5"	""	"66.0"	"1.5"	"77.3"	"72.3"	""	"983"	"23"	"36.000"	"29.000"	"0.250913207487912"	"23"	"0.003317"	"0.03688"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEAAYTDLR"	"[R].rLEAAYTDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"1"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"479.60629"	"1436.80432"	"1436.80589"	"-1.09"	"-0.00052"	"9/100"	"9"	"100"	"5124599.05505371"	"HCD"	"MS2"	"8.045745"	"80.8"	"100.000"	"49.4600"	"15134"	"15134"	"15111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.0"	""	"116.1"	""	"135.3"	""	"118.3"	"0.8"	"121.2"	"141.3"	""	"984"	"44"	"36.000"	"29.000"	"0.00216752992845224"	"22"	"9.9E-05"	"0.0006767"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLEAAYTDLR"	"[R].rLEAAYTDLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"1"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"479.60654"	"1436.80506"	"1436.80589"	"-0.58"	"-0.00028"	"9/100"	"9"	"100"	"4953303.72064209"	"HCD"	"MS2"	"8.365845"	"73.5"	"100.000"	"49.8777"	"15269"	"15269"	"15250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.0"	""	"109.8"	""	"126.2"	""	"110.7"	""	"116.8"	"120.2"	""	"989"	"40"	"36.000"	"29.000"	"0.00515425968834988"	"21"	"9.9E-05"	"0.0005123"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTPEQAAK"	"[R].fSTPEQAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"718.91083"	"1436.81438"	"1436.81495"	"-0.40"	"-0.00029"	"7/76"	"7"	"76"	"1408663.23980713"	"HCD"	"MS2"	"0"	"106.6"	"100.000"	"51.5040"	"15929"	"15929"	"15917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.9"	""	"99.4"	""	"83.9"	""	"200.4"	""	"236.0"	"263.1"	""	"948"	"38"	"36.000"	"29.000"	"0.00727408449846865"	"23"	"0.001488"	"0.01236"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQYGTVEK"	"[K].gPQYGTVEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"718.91113"	"1436.81499"	"1436.81495"	"0.03"	"0.00002"	"8/80"	"8"	"80"	"1647925.33526611"	"HCD"	"MS2"	"0"	"145.5"	"100.000"	"43.6033"	"12724"	"12724"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"204.0"	""	"184.4"	""	"184.9"	""	"225.9"	"0.4"	"303.4"	"277.3"	""	"952"	"54"	"36.000"	"29.000"	"0.000197518124293957"	""	"0"	"2.78E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENNHAQLLR"	"[R].lENNHAQLLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.7069"	"0.0000"	"1"	"1"	"1"	"479.60986"	"1436.81504"	"1436.81713"	"-1.45"	"-0.00070"	"9/86"	"9"	"86"	"22370354.8362427"	"HCD"	"MS2"	"2.815472"	"211.1"	"65.127"	"39.0035"	"10860"	"10860"	"10845"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"278.9"	""	"242.7"	""	"234.8"	""	"370.9"	""	"425.9"	"454.9"	""	"952"	"58"	"36.000"	"29.000"	"7.82720940250307E-05"	""	"0"	"2.337E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTPEQAAK"	"[R].fSTPEQAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"479.60995"	"1436.81531"	"1436.81495"	"0.25"	"0.00012"	"9/76"	"9"	"76"	"1565422.43170166"	"HCD"	"MS2"	"12.17927"	"66.3"	"100.000"	"51.3774"	"15878"	"15878"	"15853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.3"	"1.8"	"57.6"	""	"57.5"	""	"127.4"	"1.8"	"153.3"	"154.4"	""	"951"	"29"	"36.000"	"29.000"	"0.0654863102459071"	"24"	"0.001348"	"0.01118"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTPEQAAK"	"[R].fSTPEQAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"718.91138"	"1436.81548"	"1436.81495"	"0.37"	"0.00026"	"8/76"	"8"	"76"	"2370704.53607178"	"HCD"	"MS2"	"0"	"181.9"	"100.000"	"50.8795"	"15712"	"15712"	"15686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"259.7"	""	"160.5"	""	"132.0"	""	"371.5"	"1.7"	"417.4"	"387.7"	""	"935"	"42"	"36.000"	"29.000"	"0.00315341852948778"	"28"	"0.001488"	"0.01242"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LENNHAQLLR"	"[R].lENNHAQLLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.6949"	"0.0000"	"1"	"1"	"1"	"479.61002"	"1436.81549"	"1436.81713"	"-1.14"	"-0.00054"	"9/86"	"9"	"86"	"20583444.5940552"	"HCD"	"MS2"	"4.59074"	"209.4"	"65.826"	"38.9552"	"10876"	"10876"	"10861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"269.2"	""	"235.7"	""	"252.0"	""	"368.8"	""	"418.2"	"444.9"	""	"919"	"59"	"36.000"	"29.000"	"5.71854464108952E-05"	""	"0"	"6.172E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQYGTVEK"	"[K].gPQYGTVEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"718.91156"	"1436.81584"	"1436.81495"	"0.62"	"0.00045"	"8/80"	"8"	"80"	"1960066.07635498"	"HCD"	"MS2"	"0"	"164.9"	"100.000"	"43.4402"	"12692"	"12692"	"12667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.5"	""	"204.8"	""	"213.2"	""	"255.6"	""	"340.8"	"311.8"	""	"915"	"41"	"36.000"	"29.000"	"0.00332959260575597"	""	"0"	"0.0002736"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTPEQAAK"	"[R].fSTPEQAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"718.91168"	"1436.81609"	"1436.81495"	"0.79"	"0.00057"	"7/76"	"7"	"76"	"1522969.86450195"	"HCD"	"MS2"	"0"	"118.2"	"100.000"	"51.1623"	"15827"	"15827"	"15814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.9"	""	"88.6"	""	"89.5"	""	"229.8"	"1.0"	"283.4"	"275.9"	""	"918"	"40"	"36.000"	"29.000"	"0.00422486353434705"	"23"	"0.001261"	"0.01011"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTPEQAAK"	"[R].fSTPEQAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"718.91168"	"1436.81609"	"1436.81495"	"0.79"	"0.00057"	"7/76"	"7"	"76"	"2386563.17407227"	"HCD"	"MS2"	"2.796645"	"170.3"	"100.000"	"51.2098"	"15813"	"15813"	"15789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"234.8"	""	"150.9"	""	"125.3"	""	"363.0"	""	"380.7"	"368.2"	""	"918"	"37"	"36.000"	"29.000"	"0.00950194879095087"	"26"	"0.002189"	"0.02034"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTPEQAAK"	"[R].fSTPEQAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"F1LQ48"	"Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"718.91205"	"1436.81682"	"1436.81495"	"1.30"	"0.00093"	"7/76"	"7"	"76"	"234811.172241211"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"51.8024"	"16049"	"16049"	"16033"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.9"	""	"27.1"	""	"30.0"	""	"45.9"	"1.6"	"45.9"	"55.8"	""	"915"	"27"	"36.000"	"29.000"	"0.0942738185321026"	"18"	"0.004959"	"0.06119"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"QEVISTSSK"	"[K].qEVISTSSk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"718.92194"	"1436.83660"	"1436.83608"	"0.36"	"0.00026"	"8/92"	"8"	"92"	"495593.476501465"	"HCD"	"MS2"	"100"	"44.8"	"100.000"	"41.5471"	"11920"	"11920"	"11894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.2"	""	"44.8"	""	"49.8"	""	"82.4"	""	"104.0"	"101.8"	""	"790"	"33"	"35.000"	"28.000"	"0.0200261329768508"	"23"	"9.9E-05"	"0.000666"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEVISTSSK"	"[K].qEVISTSSk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"0.4186"	"0.0000"	"1"	"1"	"1"	"718.92200"	"1436.83672"	"1436.83608"	"0.44"	"0.00032"	"8/92"	"8"	"92"	"514380.610107422"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"41.6643"	"11933"	"11933"	"11906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.3"	""	"41.9"	""	"45.0"	""	"84.9"	""	"93.6"	"102.5"	""	"788"	"43"	"35.000"	"28.000"	"0.00182178122431309"	""	"0"	"5.291E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDFELIK"	"[R].dVDFELIk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"718.92242"	"1436.83757"	"1436.84010"	"-1.76"	"-0.00127"	"14/64"	"14"	"64"	"424117.093200684"	"HCD"	"MS2"	"24.53448"	"36.9"	"100.000"	"109.9647"	"39506"	"39506"	"39485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.4"	""	"45.0"	""	"43.2"	""	"70.9"	"0.0"	"69.6"	"62.9"	""	"807"	"44"	"36.000"	"29.000"	"0.00154469783928338"	""	"0"	"0.0002202"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDFELIK"	"[R].dVDFELIk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"718.92255"	"1436.83782"	"1436.84010"	"-1.59"	"-0.00114"	"7/64"	"7"	"64"	"294325.635681152"	"HCD"	"MS2"	"16.92726"	"27.9"	"100.000"	"109.7379"	"39403"	"39403"	"39385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"28.6"	""	"26.6"	""	"62.1"	""	"47.6"	"56.6"	""	"807"	"44"	"36.000"	"29.000"	"0.00162870916062429"	""	"0"	"0.0001475"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDFELIK"	"[R].dVDFELIk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"718.93176"	"1436.85625"	"1436.84010"	"11.24"	"0.00807"	"6/64"	"6"	"64"	"196358.045532227"	"HCD"	"MS2"	"28.68292"	"14.2"	"100.000"	"109.9094"	"39484"	"39484"	"39464"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.8"	""	"20.6"	""	"17.7"	""	"27.6"	""	"25.8"	"27.3"	""	"614"	"26"	"34.000"	"27.000"	"0.0743255917348006"	"24"	"0.004998"	"0.06348"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYDTDPAK"	"[K].aVYDTDPAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"719.40173"	"1437.79619"	"1437.79897"	"-1.93"	"-0.00139"	"8/68"	"8"	"68"	"993806.797363281"	"HCD"	"MS2"	"0"	"77.8"	"100.000"	"48.3069"	"14667"	"14667"	"14655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.2"	""	"108.0"	""	"94.0"	""	"144.5"	""	"133.9"	"146.7"	""	"901"	"51"	"36.000"	"29.000"	"0.000327864801943839"	"21"	"0"	"4.697E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVYDTDPAK"	"[K].aVYDTDPAk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"B0BNM9"	"Glycolipid transfer protein OS=Rattus norvegicus OX=10116 GN=GLTP PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"719.40192"	"1437.79656"	"1437.79897"	"-1.68"	"-0.00120"	"8/68"	"8"	"68"	"1260711.49395752"	"HCD"	"MS2"	"0"	"97.4"	"100.000"	"48.6762"	"14781"	"14781"	"14756"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.6"	""	"117.7"	""	"122.3"	""	"174.5"	""	"188.7"	"194.7"	""	"897"	"50"	"36.000"	"29.000"	"0.000456838237542271"	"22"	"0"	"8.993E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTTSSVEK"	"[R].dLTTSSVEk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"P15205"	"Microtubule-associated protein 1B OS=Rattus norvegicus OX=10116 GN=Map1b PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"719.41467"	"1437.82207"	"1437.82010"	"1.37"	"0.00099"	"11/78"	"11"	"78"	"351139.531555176"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"51.9567"	"16112"	"16112"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.4"	""	"35.5"	""	"43.6"	""	"65.9"	""	"85.0"	"69.2"	""	"816"	"31"	"36.000"	"29.000"	"0.0351285450891317"	"24"	"0.0001686"	"0.001268"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"719.42035"	"1437.83342"	"1437.83535"	"-1.34"	"-0.00097"	"14/72"	"14"	"72"	"2570202.87695313"	"HCD"	"MS2"	"3.057919"	"120.9"	"100.000"	"76.8426"	"26216"	"26216"	"26200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.0"	""	"176.6"	""	"171.3"	""	"178.8"	""	"215.3"	"226.7"	""	"734"	"45"	"35.000"	"28.000"	"0.00110832228138754"	"22"	"0.0001991"	"0.001995"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"479.94952"	"1437.83402"	"1437.83535"	"-0.93"	"-0.00044"	"6/72"	"6"	"72"	"2798357.16400146"	"HCD"	"MS2"	"28.28674"	"98.7"	"100.000"	"76.2858"	"25989"	"25989"	"25968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.9"	"3.4"	"141.0"	""	"132.5"	""	"159.2"	""	"162.6"	"178.1"	""	"736"	"31"	"35.000"	"28.000"	"0.0321253463566825"	"23"	"0.0005161"	"0.006951"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"719.42072"	"1437.83415"	"1437.83535"	"-0.83"	"-0.00060"	"14/72"	"14"	"72"	"2168755.17047119"	"HCD"	"MS2"	"0"	"182.0"	"100.000"	"76.9449"	"26289"	"26289"	"26272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"267.5"	""	"255.3"	""	"244.8"	""	"268.0"	""	"322.4"	"369.9"	""	"734"	"44"	"35.000"	"28.000"	"0.00161683634906905"	"23"	"0.0001686"	"0.001276"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"719.42078"	"1437.83428"	"1437.83535"	"-0.75"	"-0.00054"	"14/72"	"14"	"72"	"3082680.84197998"	"HCD"	"MS2"	"1.055082"	"235.1"	"100.000"	"76.2395"	"25970"	"25970"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"382.5"	""	"346.0"	""	"320.5"	""	"379.2"	""	"391.3"	"405.5"	""	"734"	"45"	"35.000"	"28.000"	"0.0010731639226685"	"26"	"9.9E-05"	"0.0007852"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"479.94962"	"1437.83429"	"1437.83535"	"-0.74"	"-0.00035"	"6/72"	"6"	"72"	"6199410.00915527"	"HCD"	"MS2"	"6.985285"	"202.3"	"100.000"	"76.6694"	"26177"	"26177"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.1"	""	"287.2"	""	"274.9"	""	"317.7"	""	"348.4"	"391.6"	""	"734"	"30"	"35.000"	"28.000"	"0.0388746117140065"	"22"	"0.0007633"	"0.007263"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"479.94971"	"1437.83457"	"1437.83535"	"-0.55"	"-0.00026"	"8/72"	"8"	"72"	"3391138.79541016"	"HCD"	"MS2"	"25.41619"	"121.6"	"100.000"	"76.3858"	"26061"	"26061"	"26042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.0"	""	"175.4"	""	"161.5"	""	"198.8"	"0.8"	"214.2"	"208.2"	""	"734"	"25"	"35.000"	"28.000"	"0.103912086245837"	"22"	"0.001453"	"0.01164"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"719.42096"	"1437.83464"	"1437.83535"	"-0.49"	"-0.00035"	"14/72"	"14"	"72"	"3944408.93048096"	"HCD"	"MS2"	"0"	"305.9"	"100.000"	"76.3466"	"26045"	"26045"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"511.8"	""	"445.2"	""	"430.9"	""	"500.8"	""	"482.3"	"521.3"	""	"734"	"44"	"35.000"	"28.000"	"0.00157639868622714"	"25"	"0.0001686"	"0.001638"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"479.94977"	"1437.83475"	"1437.83535"	"-0.42"	"-0.00020"	"6/72"	"6"	"72"	"6435353.08624268"	"HCD"	"MS2"	"7.190557"	"210.5"	"100.000"	"76.5694"	"26105"	"26105"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.4"	""	"285.4"	""	"286.3"	""	"336.0"	""	"360.1"	"393.5"	""	"719"	"29"	"35.000"	"28.000"	"0.050780724729188"	"23"	"0.0001991"	"0.004646"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"719.42120"	"1437.83513"	"1437.83535"	"-0.15"	"-0.00011"	"14/72"	"14"	"72"	"12876478.8202515"	"HCD"	"MS2"	"0"	"386.0"	"77.328"	"76.5302"	"26089"	"26089"	"26077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"619.6"	""	"529.3"	""	"539.0"	""	"588.5"	""	"677.4"	"700.9"	""	"716"	"45"	"35.000"	"28.000"	"0.00101130703101982"	"26"	"0.0001991"	"0.003003"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vINDYVEk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"719.42133"	"1437.83537"	"1437.83535"	"0.02"	"0.00001"	"14/72"	"14"	"72"	"12420182.7360229"	"HCD"	"MS2"	"0"	"728.3"	"76.288"	"76.6486"	"26169"	"26169"	"26153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1128.7"	""	"1003.1"	""	"1014.5"	""	"1166.4"	""	"1237.3"	"1350.4"	""	"718"	"44"	"35.000"	"28.000"	"0.00154559053166524"	"25"	"0.0001991"	"0.002798"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVPEQPVTLR"	"[R].gLVPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88267"	"Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O88267"	"Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"719.43433"	"1437.86138"	"1437.86268"	"-0.91"	"-0.00065"	"5/98"	"5"	"98"	"456086.214294434"	"HCD"	"MS2"	"22.35614"	"25.3"	"100.000"	"83.9551"	"29122"	"29122"	"29100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"37.2"	""	"26.9"	""	"38.0"	""	"57.4"	"51.1"	""	"544"	"29"	"34.000"	"27.000"	"0.0315914022964573"	"24"	"0.002799"	"0.02947"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVPEQPVTLR"	"[R].gLVPEQPVTLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88267"	"Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"O88267"	"Acyl-coenzyme A thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Acot1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.43475"	"1437.86223"	"1437.86268"	"-0.31"	"-0.00022"	"9/98"	"9"	"98"	"256895.535522461"	"HCD"	"MS2"	"56.70347"	"22.8"	"100.000"	"83.8292"	"29042"	"29042"	"29023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.9"	""	"31.7"	""	"31.7"	""	"36.1"	""	"44.0"	"37.8"	""	"544"	"4"	"34.000"	"27.000"	"11.8459229642475"	"13"	"0.002189"	"0.02034"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSSEVWFDR"	"[K].sPSSEVWFDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"P42346"	"Serine/threonine-protein kinase mTOR OS=Rattus norvegicus OX=10116 GN=Mtor PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"719.86163"	"1438.71599"	"1438.71641"	"-0.29"	"-0.00021"	"9/88"	"9"	"88"	"395135.810424805"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"78.4299"	"26882"	"26882"	"26855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"32.5"	""	"40.3"	""	"46.0"	"0.5"	"57.9"	"55.6"	""	"632"	"22"	"34.000"	"28.000"	"0.2087791295704"	"19"	"0.00192"	"0.01588"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDTDSWMR"	"[K].lSVDTDSWMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.86267"	"1438.71807"	"1438.71978"	"-1.19"	"-0.00086"	"11/82"	"11"	"82"	"178247.032714844"	"HCD"	"MS2"	"24.76031"	"14.3"	"100.000"	"100.4566"	"35778"	"35778"	"35753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"21.3"	""	"17.8"	""	"20.7"	""	"27.7"	"28.0"	""	"644"	"13"	"35.000"	"28.000"	"1.76139140051859"	"13"	"0.003317"	"0.03642"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDTDSWMR"	"[K].lSVDTDSWMR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"719.86334"	"1438.71941"	"1438.71978"	"-0.26"	"-0.00019"	"5/82"	"5"	"82"	"239891.371704102"	"HCD"	"MS2"	"27.66026"	"17.0"	"100.000"	"100.3748"	"35717"	"35717"	"35692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.5"	""	"21.2"	""	"21.1"	""	"26.5"	""	"37.4"	"34.2"	""	"645"	"27"	"35.000"	"28.000"	"0.0581473221427211"	"19"	"0.001348"	"0.01137"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEDNEYTAR"	"[R].vIEDNEYTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.87109"	"1438.73491"	"1438.73754"	"-1.83"	"-0.00131"	"13/92"	"13"	"92"	"273508.479003906"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"47.4942"	"14300"	"14300"	"14273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.1"	""	"26.3"	""	"22.7"	""	"39.5"	""	"41.0"	"48.4"	""	"729"	"27"	"35.000"	"28.000"	"0.0793775212022727"	"14"	"0"	"0.0002538"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEDNEYTAR"	"[R].vIEDNEYTAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.87219"	"1438.73711"	"1438.73754"	"-0.30"	"-0.00022"	"7/92"	"7"	"92"	"303905.471435547"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"47.2089"	"14222"	"14222"	"14193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"25.2"	""	"24.5"	""	"36.5"	""	"48.6"	"45.5"	""	"752"	"36"	"35.000"	"28.000"	"0.00910306921572804"	"15"	"0"	"0.0001321"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSASASMAK"	"[R].lDSASASMAk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"719.90088"	"1438.79448"	"1438.79759"	"-2.16"	"-0.00155"	"9/82"	"9"	"82"	"191158.42956543"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"57.2767"	"18307"	"18307"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"23.7"	""	"24.5"	""	"28.0"	""	"33.1"	"39.3"	""	"839"	"14"	"36.000"	"29.000"	"1.85665822206122"	"15"	"0.009382"	"0.1228"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEFNLESK"	"[R].nEFNLESk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"719.90088"	"1438.79448"	"1438.79422"	"0.18"	"0.00013"	"7/80"	"7"	"80"	"1355634.20080566"	"HCD"	"MS2"	"0"	"129.4"	"100.000"	"67.6270"	"22475"	"22475"	"22453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"178.9"	""	"145.3"	""	"155.6"	""	"237.5"	"3.2"	"264.5"	"242.4"	""	"839"	"39"	"36.000"	"29.000"	"0.00512544957439164"	"24"	"9.9E-05"	"0.0006313"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEFNLESK"	"[R].nEFNLESk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"719.90112"	"1438.79497"	"1438.79422"	"0.52"	"0.00038"	"6/80"	"6"	"80"	"2585304.17205811"	"HCD"	"MS2"	"0"	"229.7"	"100.000"	"67.7410"	"22552"	"22552"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"317.2"	""	"246.0"	""	"266.1"	""	"443.9"	"3.4"	"456.1"	"446.9"	""	"839"	"42"	"36.000"	"29.000"	"0.00268368763484971"	"22"	"0.0001686"	"0.001148"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGEITASSSK"	"[K].tGEITASSSk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"719.91071"	"1438.81413"	"1438.81534"	"-0.84"	"-0.00060"	"8/88"	"8"	"88"	"389619.398620605"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"37.0128"	"10087"	"10087"	"10058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"42.3"	""	"50.5"	""	"66.0"	""	"66.4"	"74.4"	""	"747"	"55"	"35.000"	"28.000"	"0.000118929777436471"	"26"	"0"	"1.052E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vInDYVEk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"719.91187"	"1438.81645"	"1438.81937"	"-2.03"	"-0.00146"	"7/72"	"7"	"72"	"916171.182556152"	"HCD"	"MS2"	"13.42037"	"64.2"	"100.000"	"77.6079"	"26521"	"26521"	"26503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.9"	""	"71.1"	""	"80.3"	""	"105.1"	""	"123.3"	"139.5"	""	"746"	"41"	"35.000"	"28.000"	"0.00279067223690661"	"22"	"9.9E-05"	"0.000459"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vInDYVEk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.91193"	"1438.81658"	"1438.81937"	"-1.94"	"-0.00140"	"5/72"	"5"	"72"	"238110.218444824"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"82.3420"	"28473"	"28473"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.4"	""	"34.4"	""	"27.5"	""	"35.6"	""	"41.2"	"41.2"	""	"745"	"21"	"35.000"	"28.000"	"0.317779792471552"	"14"	"0.00296"	"0.03197"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vInDYVEk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"719.91205"	"1438.81682"	"1438.81937"	"-1.77"	"-0.00127"	"12/72"	"12"	"72"	"758565.546142578"	"HCD"	"MS2"	"33.36547"	"57.5"	"100.000"	"77.6290"	"26557"	"26557"	"26545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.0"	""	"63.6"	""	"72.2"	""	"88.7"	""	"105.2"	"126.6"	""	"745"	"36"	"35.000"	"28.000"	"0.00946512332817115"	"22"	"9.9E-05"	"0.0005501"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINDYVEK"	"[K].vInDYVEk.[G]"	"N-Term(TMT6plex); N3(Deamidated); K8(TMT6plex)"	"1"	"1"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"P17475"	"Alpha-1-antiproteinase OS=Rattus norvegicus OX=10116 GN=Serpina1 PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"719.91315"	"1438.81902"	"1438.81937"	"-0.24"	"-0.00018"	"14/72"	"14"	"72"	"403762.489990234"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"82.3743"	"28458"	"28458"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"39.1"	""	"42.5"	""	"61.6"	""	"64.5"	"73.7"	""	"739"	"41"	"35.000"	"28.000"	"0.00273914134160689"	"24"	"0"	"0.0003529"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEYLEK"	"[R].gLEEYLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"719.91382"	"1438.82036"	"1438.81937"	"0.69"	"0.00050"	"10/64"	"10"	"64"	"220709.440429688"	"HCD"	"MS2"	"47.75446"	"23.4"	"100.000"	"99.1223"	"35208"	"35208"	"35183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.9"	""	"31.4"	""	"25.7"	""	"50.0"	""	"43.1"	"43.0"	""	"731"	"23"	"35.000"	"28.000"	"0.193591988742401"	"25"	"0.0001991"	"0.004064"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEEYLEK"	"[R].gLEEYLEk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"Q8K4V4"	"Sorting nexin-27 OS=Rattus norvegicus OX=10116 GN=Snx27 PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"719.91394"	"1438.82060"	"1438.81937"	"0.86"	"0.00062"	"9/64"	"9"	"64"	"215252.229309082"	"HCD"	"MS2"	"39.24055"	"20.3"	"100.000"	"99.1857"	"35263"	"35263"	"35244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.6"	""	"26.1"	""	"28.3"	""	"31.4"	""	"36.8"	"40.3"	""	"734"	"17"	"35.000"	"28.000"	"0.710666860768405"	"18"	"0.003818"	"0.04205"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNEVTLYK"	"[R].nNEVTLYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"719.91846"	"1438.82964"	"1438.83060"	"-0.67"	"-0.00048"	"14/74"	"14"	"74"	"972987.884338379"	"HCD"	"MS2"	"0"	"93.2"	"100.000"	"59.3940"	"19135"	"19135"	"19114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.2"	""	"128.9"	""	"134.8"	""	"142.9"	"0.7"	"174.1"	"177.4"	""	"647"	"47"	"35.000"	"28.000"	"0.00066355096485007"	""	"0"	"0.0002284"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNEVTLYK"	"[R].nNEVTLYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"719.91888"	"1438.83049"	"1438.83060"	"-0.08"	"-0.00005"	"14/74"	"14"	"74"	"941121.404174805"	"HCD"	"MS2"	"5.047566"	"87.4"	"100.000"	"58.9132"	"18974"	"18974"	"18957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.8"	""	"120.4"	""	"137.2"	""	"127.5"	"2.2"	"155.1"	"153.3"	""	"628"	"47"	"34.000"	"27.000"	"0.000635228022104977"	""	"0"	"0.0003197"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNEVTLYK"	"[R].nNEVTLYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"719.91888"	"1438.83049"	"1438.83060"	"-0.08"	"-0.00005"	"14/74"	"14"	"74"	"884883.814331055"	"HCD"	"MS2"	"2.978507"	"81.8"	"100.000"	"59.1961"	"19090"	"19090"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.9"	""	"111.0"	""	"120.9"	""	"121.6"	""	"151.5"	"157.5"	""	"628"	"49"	"34.000"	"27.000"	"0.000413932615906712"	""	"0"	"0.0003395"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNEVTLYK"	"[R].nNEVTLYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"719.91888"	"1438.83049"	"1438.83060"	"-0.08"	"-0.00005"	"14/74"	"14"	"74"	"892518.81463623"	"HCD"	"MS2"	"17.7896"	"85.9"	"100.000"	"59.0971"	"19014"	"19014"	"18990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.5"	""	"132.7"	""	"120.7"	""	"138.7"	""	"160.0"	"153.3"	""	"628"	"45"	"34.000"	"27.000"	"0.00104455099734317"	""	"0"	"0.0001739"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHEEFEK"	"[K].yHEEFEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"480.58987"	"1439.75507"	"1439.75710"	"-1.41"	"-0.00068"	"6/54"	"6"	"54"	"7654486.0267334"	"HCD"	"MS2"	"24.13916"	"287.7"	"100.000"	"40.7696"	"11574"	"11574"	"11550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"377.8"	""	"291.7"	""	"358.2"	""	"628.6"	"3.9"	"643.8"	"425.3"	""	"765"	"29"	"35.000"	"28.000"	"0.0439168760222558"	"25"	"0.0001991"	"0.004974"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHEEFEK"	"[K].yHEEFEk.[S]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"480.59000"	"1439.75544"	"1439.75710"	"-1.16"	"-0.00056"	"6/54"	"6"	"54"	"7347607.12115479"	"HCD"	"MS2"	"22.04535"	"264.2"	"100.000"	"40.6398"	"11556"	"11556"	"11537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"358.0"	""	"287.4"	""	"323.9"	""	"571.9"	"3.1"	"565.4"	"395.3"	""	"765"	"28"	"35.000"	"28.000"	"0.0599282284316367"	"24"	"0.0001991"	"0.003191"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"480.59613"	"1439.77384"	"1439.77823"	"-3.05"	"-0.00146"	"6/76"	"6"	"76"	"3747567.03564453"	"HCD"	"MS2"	"40.27117"	"139.8"	"100.000"	"67.9565"	"22608"	"22608"	"22591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.8"	"3.2"	"162.1"	""	"176.4"	""	"243.6"	""	"257.2"	"285.2"	""	"855"	"31"	"36.000"	"29.000"	"0.036892332917038"	"25"	"0.0001991"	"0.003284"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"480.59616"	"1439.77393"	"1439.77823"	"-2.99"	"-0.00143"	"7/76"	"7"	"76"	"3474318.5680542"	"HCD"	"MS2"	"43.99694"	"127.2"	"100.000"	"68.0151"	"22664"	"22664"	"22641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.1"	"3.3"	"154.9"	""	"162.4"	""	"223.6"	""	"240.0"	"247.4"	""	"854"	"31"	"36.000"	"29.000"	"0.0334524457461173"	"24"	"0.0001991"	"0.002121"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.3704"	"0.0000"	"1"	"1"	"1"	"480.59692"	"1439.77622"	"1439.77823"	"-1.40"	"-0.00067"	"6/76"	"6"	"76"	"1794419.69067383"	"HCD"	"MS2"	"18.06837"	"73.4"	"100.000"	"68.2767"	"22738"	"22738"	"22716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.8"	"4.0"	"86.7"	""	"87.0"	""	"122.9"	""	"144.8"	"148.9"	""	"853"	"27"	"36.000"	"29.000"	"0.0767218445302429"	""	"9.9E-05"	"0.0007205"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"720.39191"	"1439.77654"	"1439.77823"	"-1.18"	"-0.00085"	"14/76"	"14"	"76"	"2194946.90631104"	"HCD"	"MS2"	"1.715558"	"203.9"	"100.000"	"68.4183"	"22828"	"22828"	"22810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.7"	""	"236.3"	""	"276.6"	""	"331.8"	""	"382.0"	"412.6"	""	"851"	"42"	"36.000"	"29.000"	"0.00291004405918248"	"24"	"0"	"0.000126"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"480.59711"	"1439.77677"	"1439.77823"	"-1.02"	"-0.00049"	"7/76"	"7"	"76"	"1774918.91888428"	"HCD"	"MS2"	"23.19203"	"72.5"	"100.000"	"68.3448"	"22798"	"22798"	"22778"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.1"	""	"79.0"	""	"96.2"	""	"105.5"	"1.1"	"156.7"	"154.1"	""	"893"	"35"	"36.000"	"29.000"	"0.0127591417761691"	"24"	"0.0001686"	"0.001111"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"720.39221"	"1439.77715"	"1439.77823"	"-0.75"	"-0.00054"	"7/76"	"7"	"76"	"1165658.21496582"	"HCD"	"MS2"	"5.504295"	"113.9"	"100.000"	"68.4357"	"22803"	"22803"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.8"	""	"119.2"	""	"142.6"	""	"182.0"	"1.7"	"228.7"	"232.7"	""	"885"	"26"	"36.000"	"29.000"	"0.108620869519063"	"24"	"0"	"0.0002316"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"720.39502"	"1439.78276"	"1439.77823"	"3.15"	"0.00227"	"7/76"	"7"	"76"	"7612208.88226318"	"HCD"	"MS2"	"0.4591083"	"679.9"	"100.000"	"68.1062"	"22669"	"22669"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"984.5"	""	"751.5"	""	"852.7"	""	"1166.6"	""	"1322.4"	"1381.6"	""	"865"	"35"	"36.000"	"29.000"	"0.0141574850535098"	"26"	"0.0001686"	"0.001854"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEFDRDFR"	"[K].iLEFDRDFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"1"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"480.59937"	"1439.78354"	"1439.78443"	"-0.62"	"-0.00030"	"8/78"	"8"	"78"	"489176.635803223"	"HCD"	"MS2"	"25.16949"	"22.3"	"100.000"	"95.7846"	"33858"	"33858"	"33839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.7"	""	"46.8"	""	"39.7"	""	"26.2"	""	"30.5"	"29.0"	""	"860"	"16"	"36.000"	"29.000"	"1.07762697880381"	"21"	"0.001261"	"0.01013"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GELSGDFEK"	"[R].gELSGDFEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"720.39545"	"1439.78362"	"1439.77823"	"3.74"	"0.00269"	"7/76"	"7"	"76"	"8663023.05010986"	"HCD"	"MS2"	"0"	"730.4"	"98.021"	"68.1028"	"22700"	"22700"	"22684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1074.9"	""	"806.8"	""	"911.4"	""	"1233.6"	""	"1448.3"	"1469.7"	""	"860"	"35"	"36.000"	"29.000"	"0.0146712951997429"	"28"	"9.9E-05"	"0.001002"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEFDRDFR"	"[K].iLEFDRDFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"Q63357"	"Unconventional myosin-Id OS=Rattus norvegicus OX=10116 GN=Myo1d PE=1 SV=3"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"480.59958"	"1439.78418"	"1439.78443"	"-0.17"	"-0.00008"	"3/78"	"3"	"78"	"388292.034790039"	"HCD"	"MS2"	"9.70034"	"19.8"	"100.000"	"95.8488"	"33917"	"33917"	"33891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"37.3"	""	"38.0"	""	"25.0"	""	"26.1"	"31.7"	""	"874"	"5"	"36.000"	"29.000"	"14.537222478948"	"14"	"0.006845"	"0.08587"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"720.40924"	"1439.81120"	"1439.81462"	"-2.37"	"-0.00171"	"14/70"	"14"	"70"	"429573.866271973"	"HCD"	"MS2"	"46.33943"	"42.2"	"100.000"	"69.3170"	"23195"	"23195"	"23167"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.6"	""	"47.0"	""	"58.1"	""	"70.7"	""	"87.6"	"86.9"	""	"738"	"44"	"35.000"	"28.000"	"0.00136152733872386"	"24"	"0"	"5.044E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNYEVLEK"	"[K].sNYEVLEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"O35346"	"Focal adhesion kinase 1 OS=Rattus norvegicus OX=10116 GN=Ptk2 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"720.41040"	"1439.81352"	"1439.81462"	"-0.76"	"-0.00055"	"7/80"	"7"	"80"	"270449.32043457"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"65.0386"	"21459"	"21459"	"21434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.2"	""	"38.5"	""	"34.3"	""	"44.8"	""	"52.0"	"55.0"	""	"743"	"43"	"35.000"	"28.000"	"0.0017822097616853"	"28"	"9.9E-05"	"0.0005135"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"720.41040"	"1439.81352"	"1439.81462"	"-0.76"	"-0.00055"	"14/70"	"14"	"70"	"519477.346008301"	"HCD"	"MS2"	"25.25795"	"53.7"	"100.000"	"69.2556"	"23136"	"23136"	"23108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.1"	""	"65.7"	""	"67.5"	""	"79.3"	""	"111.3"	"112.0"	""	"743"	"48"	"35.000"	"28.000"	"0.00059150554209951"	"22"	"0"	"1.023E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"480.60938"	"1439.81357"	"1439.81462"	"-0.73"	"-0.00035"	"9/70"	"9"	"70"	"2606579.65863037"	"HCD"	"MS2"	"14.24965"	"84.1"	"100.000"	"69.7021"	"23317"	"23317"	"23298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.1"	""	"88.3"	""	"103.0"	""	"125.7"	""	"192.9"	"196.5"	""	"743"	"31"	"35.000"	"28.000"	"0.0274131421492961"	"22"	"0.0001686"	"0.001203"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"480.60950"	"1439.81394"	"1439.81462"	"-0.47"	"-0.00023"	"8/70"	"8"	"70"	"1892870.85351563"	"HCD"	"MS2"	"56.53149"	"65.6"	"100.000"	"69.4005"	"23195"	"23195"	"23168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.8"	""	"68.5"	""	"79.0"	""	"105.0"	""	"147.3"	"140.3"	""	"743"	"27"	"35.000"	"28.000"	"0.0760254182543216"	"24"	"0.0001686"	"0.001093"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYVQEVTK"	"[K].dYVQEVTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"720.41064"	"1439.81401"	"1439.81462"	"-0.42"	"-0.00030"	"14/76"	"14"	"76"	"355890.190673828"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"60.9826"	"19814"	"19814"	"19787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"42.5"	""	"45.5"	""	"56.2"	"0.5"	"72.1"	"66.9"	""	"743"	"52"	"35.000"	"28.000"	"0.00022540254644213"	""	"0"	"0.0002063"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAYEALEK"	"[R].aSAYEALEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"720.41083"	"1439.81438"	"1439.81462"	"-0.17"	"-0.00012"	"8/76"	"8"	"76"	"287279.118835449"	"HCD"	"MS2"	"22.76173"	"30.3"	"100.000"	"67.4645"	"22441"	"22441"	"22416"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"29.5"	""	"39.7"	""	"53.3"	""	"56.5"	"63.1"	""	"734"	"36"	"35.000"	"28.000"	"0.00848527777994443"	"26"	"0"	"0.0001527"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"480.60965"	"1439.81440"	"1439.81462"	"-0.15"	"-0.00007"	"9/70"	"9"	"70"	"3140841.0289917"	"HCD"	"MS2"	"13.22742"	"100.7"	"100.000"	"69.6531"	"23331"	"23331"	"23312"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.9"	""	"95.0"	""	"115.3"	""	"166.1"	""	"227.6"	"228.5"	""	"734"	"34"	"35.000"	"28.000"	"0.0135726941979358"	"23"	"9.9E-05"	"0.0007897"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAYEALEK"	"[R].aSAYEALEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"720.41089"	"1439.81450"	"1439.81462"	"-0.08"	"-0.00006"	"7/76"	"7"	"76"	"401825.191345215"	"HCD"	"MS2"	"37.78331"	"39.8"	"100.000"	"67.1328"	"22306"	"22306"	"22284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"42.4"	""	"47.4"	""	"74.7"	""	"77.1"	"79.7"	""	"737"	"44"	"35.000"	"28.000"	"0.00156472309314216"	""	"0"	"2.976E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"720.41089"	"1439.81450"	"1439.81462"	"-0.08"	"-0.00006"	"8/70"	"8"	"70"	"2550365.53045654"	"HCD"	"MS2"	"0"	"118.6"	"100.000"	"69.6073"	"23313"	"23313"	"23299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.1"	""	"123.6"	""	"134.9"	""	"193.7"	"0.2"	"248.1"	"259.1"	""	"737"	"60"	"35.000"	"28.000"	"3.70200918717589E-05"	"21"	"0"	"5.448E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYVQEVTK"	"[K].dYVQEVTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"720.41101"	"1439.81474"	"1439.81462"	"0.09"	"0.00006"	"5/76"	"5"	"76"	"239166.871765137"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"61.2864"	"19906"	"19906"	"19880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"31.3"	""	"33.7"	""	"44.8"	"0.5"	"57.3"	"52.7"	""	"737"	"29"	"35.000"	"28.000"	"0.0519322922218461"	"19"	"0.0003938"	"0.00634"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAYEALEK"	"[R].aSAYEALEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.5667"	"0.0000"	"1"	"1"	"1"	"720.41113"	"1439.81499"	"1439.81462"	"0.26"	"0.00019"	"8/76"	"8"	"76"	"376862.45880127"	"HCD"	"MS2"	"29.9783"	"36.6"	"100.000"	"67.4012"	"22384"	"22384"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"42.9"	""	"42.9"	""	"60.6"	""	"78.1"	"72.2"	""	"736"	"30"	"35.000"	"28.000"	"0.0354689080693621"	"27"	"0"	"0.0002377"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETAEAYLGK"	"[K].eTAEAYLGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"720.41132"	"1439.81536"	"1439.81462"	"0.51"	"0.00037"	"8/70"	"8"	"70"	"2718651.35717773"	"HCD"	"MS2"	"0"	"231.6"	"100.000"	"69.5411"	"23252"	"23252"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.4"	""	"251.1"	""	"238.0"	""	"373.8"	""	"491.4"	"538.8"	""	"734"	"57"	"35.000"	"28.000"	"6.6323290424601E-05"	"21"	"0"	"6.477E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYVQEVTK"	"[K].dYVQEVTk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"Q4KLJ8"	"Phosducin-like protein 3 OS=Rattus norvegicus OX=10116 GN=Pdcl3 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"720.41150"	"1439.81572"	"1439.81462"	"0.77"	"0.00055"	"10/76"	"10"	"76"	"190689.42767334"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"60.9803"	"19781"	"19781"	"19757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"26.7"	""	"30.8"	""	"28.3"	""	"32.4"	"38.4"	""	"745"	"37"	"35.000"	"28.000"	"0.00803759792409368"	"20"	"0.0001991"	"0.004155"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAYEALEK"	"[R].aSAYEALEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"720.41150"	"1439.81572"	"1439.81462"	"0.77"	"0.00055"	"11/76"	"11"	"76"	"373016.149963379"	"HCD"	"MS2"	"40.18106"	"37.2"	"100.000"	"67.0696"	"22249"	"22249"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.1"	""	"44.8"	""	"44.7"	""	"61.0"	""	"69.8"	"74.1"	""	"745"	"33"	"35.000"	"28.000"	"0.0178700709617167"	""	"0"	"0.0002758"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"720.42743"	"1439.84758"	"1439.85100"	"-2.38"	"-0.00171"	"7/78"	"7"	"78"	"541243.637756348"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"38.0383"	"10502"	"10502"	"10471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.5"	""	"80.7"	""	"77.7"	""	"65.8"	"0.4"	"90.5"	"83.3"	""	"548"	"30"	"34.000"	"27.000"	"0.0301821770814348"	""	"0.002373"	"0.02235"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.5000"	"0.0000"	"1"	"2"	"2"	"720.42743"	"1439.84758"	"1439.85100"	"-2.38"	"-0.00171"	"7/78"	"7"	"78"	"541243.637756348"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"38.0383"	"10502"	"10502"	"10471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.5"	""	"80.7"	""	"77.7"	""	"65.8"	"0.4"	"90.5"	"83.3"	""	"548"	"30"	"34.000"	"27.000"	"0.0301821770814348"	""	"0.002373"	"0.02235"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	"0.0488"	"0.0000"	"1"	"1"	"1"	"720.42932"	"1439.85137"	"1439.85100"	"0.25"	"0.00018"	"7/78"	"7"	"78"	"488829.815185547"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"38.1167"	"10498"	"10498"	"10471"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.9"	""	"66.8"	""	"73.0"	""	"65.9"	""	"96.9"	"83.4"	""	"535"	"41"	"34.000"	"27.000"	"0.0020105912414987"	""	"0.002588"	"0.02727"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEATLEK"	"[K].kYEATLEk.[C]"	"K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"2"	"2"	""	"0.0488"	"2"	"2"	"2"	"720.42932"	"1439.85137"	"1439.85100"	"0.25"	"0.00018"	"7/78"	"7"	"78"	"488829.815185547"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"38.1167"	"10498"	"10498"	"10471"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.9"	""	"66.8"	""	"73.0"	""	"65.9"	""	"96.9"	"83.4"	""	"535"	"39"	"34.000"	"27.000"	"0.00338316972948533"	""	"0.00307"	"0.03314"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAPQSPSVPK"	"[K].aAPQSPSVPk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"P37199"	"Nuclear pore complex protein Nup155 OS=Rattus norvegicus OX=10116 GN=Nup155 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"720.43414"	"1439.86101"	"1439.86224"	"-0.85"	"-0.00061"	"6/88"	"6"	"88"	"289211.716247559"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"43.9452"	"12863"	"12863"	"12835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"22.3"	""	"32.0"	""	"31.7"	""	"43.3"	"47.7"	""	"485"	"35"	"33.000"	"26.000"	"0.00821697078637566"	"26"	"0.001453"	"0.01157"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEPEMGK"	"[K].eYEPEMGk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"3"	"3"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P18596; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.87585"	"1440.74443"	"1440.74449"	"-0.04"	"-0.00003"	"6/64"	"6"	"64"	"646954.162353516"	"HCD"	"MS2"	"42.70245"	"63.2"	"100.000"	"53.2923"	"16657"	"16657"	"16634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.3"	""	"53.2"	""	"68.3"	""	"84.4"	""	"146.6"	"182.6"	""	"703"	"15"	"35.000"	"28.000"	"1.03258385266448"	"13"	"0.0042"	"0.04513"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"720.88977"	"1440.77226"	"1440.77348"	"-0.84"	"-0.00061"	"8/84"	"8"	"84"	"1170868.125"	"HCD"	"MS2"	"0"	"109.5"	"100.000"	"41.9635"	"12055"	"12055"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.1"	""	"104.9"	""	"126.2"	""	"204.1"	"0.0"	"245.6"	"225.8"	""	"797"	"60"	"36.000"	"29.000"	"4.23085679543691E-05"	"29"	"0"	"5.753E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8246"	"0.0000"	"1"	"1"	"1"	"720.88995"	"1440.77263"	"1440.77348"	"-0.59"	"-0.00042"	"8/84"	"8"	"84"	"495019.027648926"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"42.1199"	"12153"	"12153"	"12129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.1"	""	"52.0"	""	"62.5"	""	"93.4"	""	"113.0"	"104.3"	""	"794"	"57"	"35.000"	"28.000"	"7.63467416377334E-05"	"26"	"0"	"4.489E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"720.89014"	"1440.77300"	"1440.77348"	"-0.34"	"-0.00024"	"8/84"	"8"	"84"	"305511.038391113"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"42.3088"	"12196"	"12196"	"12168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.7"	""	"29.9"	""	"40.3"	""	"56.2"	""	"74.4"	"76.7"	""	"795"	"44"	"35.000"	"29.000"	"0.0015535925607748"	"21"	"0"	"6.643E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFDNAETK"	"[R].gTFDNAETk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7937"	"0.0000"	"1"	"1"	"1"	"720.89014"	"1440.77300"	"1440.77348"	"-0.34"	"-0.00024"	"16/84"	"16"	"84"	"1037768.32592773"	"HCD"	"MS2"	"0"	"105.6"	"100.000"	"41.8135"	"12028"	"12028"	"12001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.3"	""	"98.9"	""	"113.6"	""	"203.0"	"1.1"	"242.5"	"212.6"	""	"795"	"63"	"35.000"	"29.000"	"1.88945752312265E-05"	""	"0"	"8.232E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEDMLEK"	"[R].fAEDMLEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"720.89355"	"1440.77983"	"1440.78087"	"-0.72"	"-0.00052"	"14/64"	"14"	"64"	"455831.860351563"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"100.0436"	"35610"	"35610"	"35586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.2"	""	"70.9"	""	"68.1"	""	"40.2"	"1.1"	"77.2"	"80.3"	""	"782"	"45"	"35.000"	"28.000"	"0.00125943789739182"	"26"	"0"	"0.0001417"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAEDMLEK"	"[R].fAEDMLEk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"720.89368"	"1440.78008"	"1440.78087"	"-0.55"	"-0.00040"	"7/64"	"7"	"64"	"530141.338928223"	"HCD"	"MS2"	"43.12926"	"54.1"	"100.000"	"99.9525"	"35545"	"35545"	"35524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.6"	""	"101.1"	""	"80.3"	""	"56.1"	""	"99.9"	"95.2"	""	"786"	"36"	"35.000"	"28.000"	"0.00960268207208731"	"26"	"0.0001991"	"0.002282"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDELTFTK"	"[R].eDELTFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"720.90222"	"1440.79717"	"1440.79863"	"-1.02"	"-0.00073"	"11/68"	"11"	"68"	"346460.271728516"	"HCD"	"MS2"	"24.91583"	"36.9"	"100.000"	"80.1057"	"27538"	"27538"	"27509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"39.4"	""	"45.2"	""	"63.5"	""	"81.3"	"76.2"	""	"772"	"33"	"35.000"	"28.000"	"0.0178890511018207"	"19"	"0.0001991"	"0.003197"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDELTFTK"	"[R].eDELTFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.90265"	"1440.79802"	"1440.79863"	"-0.42"	"-0.00031"	"7/68"	"7"	"68"	"201454.18572998"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"80.1469"	"27582"	"27582"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"20.2"	""	"21.2"	""	"43.6"	""	"42.8"	"40.9"	""	"745"	"16"	"35.000"	"28.000"	"0.857287076984669"	"14"	"0.00307"	"0.03385"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDELTFTK"	"[R].eDELTFTk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"720.90344"	"1440.79961"	"1440.79863"	"0.68"	"0.00049"	"7/68"	"7"	"68"	"380749.074768066"	"HCD"	"MS2"	"10.61706"	"38.8"	"100.000"	"80.3240"	"27653"	"27653"	"27636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.7"	""	"38.4"	""	"48.0"	""	"76.9"	""	"76.9"	"83.9"	""	"734"	"17"	"35.000"	"28.000"	"0.739036799699496"	"18"	"0.005082"	"0.06438"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYTSGTAAK"	"[K].sPYTSGTAAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.90759"	"1440.80791"	"1440.80987"	"-1.36"	"-0.00098"	"7/84"	"7"	"84"	"133823.900024414"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"37.3452"	"10185"	"10185"	"10162"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"16.6"	""	"11.9"	""	"20.0"	""	"31.9"	"25.5"	""	"675"	"41"	"35.000"	"28.000"	"0.00294627836830987"	"15"	"0.002035"	"0.01786"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"480.94104"	"1440.80857"	"1440.80987"	"-0.90"	"-0.00043"	"8/74"	"8"	"74"	"1872550.07836914"	"HCD"	"MS2"	"43.68711"	"66.7"	"100.000"	"62.1529"	"20286"	"20286"	"20271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.9"	""	"81.4"	""	"104.6"	""	"100.3"	"1.4"	"126.9"	"113.9"	""	"683"	"17"	"35.000"	"28.000"	"0.695649869536503"	"22"	"0.001872"	"0.01562"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYTSGTAAK"	"[K].sPYTSGTAAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.90796"	"1440.80864"	"1440.80987"	"-0.85"	"-0.00061"	"15/84"	"15"	"84"	"326018.225097656"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"37.1551"	"10145"	"10145"	"10118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.7"	""	"28.0"	""	"35.4"	""	"45.0"	"0.5"	"59.2"	"65.4"	""	"683"	"61"	"35.000"	"28.000"	"2.4512675046917E-05"	"16"	"0.0001686"	"0.001176"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"480.94110"	"1440.80875"	"1440.80987"	"-0.77"	"-0.00037"	"6/74"	"6"	"74"	"1778497.08636475"	"HCD"	"MS2"	"45.96894"	"66.9"	"100.000"	"62.2972"	"20312"	"20312"	"20288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.9"	""	"87.7"	""	"100.4"	""	"104.2"	""	"123.6"	"125.3"	""	"683"	"19"	"35.000"	"28.000"	"0.442986721041021"	"22"	"0.002035"	"0.01827"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"720.90814"	"1440.80901"	"1440.80987"	"-0.60"	"-0.00043"	"14/74"	"14"	"74"	"1109132.95056152"	"HCD"	"MS2"	"0"	"105.9"	"100.000"	"62.2657"	"20332"	"20332"	"20313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.7"	""	"147.1"	""	"147.0"	""	"178.2"	""	"181.0"	"184.8"	""	"683"	"40"	"35.000"	"28.000"	"0.00368460305641486"	"22"	"0"	"0.000179"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"720.90851"	"1440.80974"	"1440.80987"	"-0.09"	"-0.00006"	"7/74"	"7"	"74"	"1393406.45220947"	"HCD"	"MS2"	"0"	"124.3"	"100.000"	"62.1709"	"20260"	"20260"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.8"	""	"184.4"	""	"170.5"	""	"187.6"	""	"218.2"	"208.9"	""	"665"	"38"	"35.000"	"28.000"	"0.00556918506278791"	"22"	"0"	"0.0001844"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPYTSGTAAK"	"[K].sPYTSGTAAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"720.90863"	"1440.80998"	"1440.80987"	"0.08"	"0.00006"	"7/84"	"7"	"84"	"261359.182922363"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"37.1826"	"10156"	"10156"	"10131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"24.1"	""	"25.6"	""	"42.4"	"1.5"	"49.4"	"49.1"	""	"665"	"47"	"35.000"	"28.000"	"0.000646832227139535"	"15"	"0.0001686"	"0.001244"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTSEFLNK"	"[K].sGTSEFLNk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"720.90869"	"1440.81011"	"1440.80987"	"0.17"	"0.00012"	"7/74"	"7"	"74"	"674743.005126953"	"HCD"	"MS2"	"0"	"67.5"	"100.000"	"61.9492"	"20204"	"20204"	"20177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"94.4"	""	"89.7"	""	"99.3"	"0.1"	"128.7"	"118.5"	""	"665"	"41"	"35.000"	"28.000"	"0.00294979374002622"	"23"	"0"	"0.0001993"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8485"	"0.0000"	"1"	"1"	"1"	"480.95013"	"1440.83585"	"1440.83719"	"-0.93"	"-0.00045"	"13/106"	"13"	"106"	"1734233.66876221"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"84.9047"	"29475"	"29475"	"29456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	""	"31.0"	""	"25.8"	""	"31.5"	""	"35.3"	"37.6"	""	"580"	"66"	"34.000"	"27.000"	"7.85955573248344E-06"	"26"	"0"	"9.489E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"480.95023"	"1440.83612"	"1440.83719"	"-0.74"	"-0.00036"	"11/106"	"11"	"106"	"1665910.54577637"	"HCD"	"MS2"	"6.638513"	"19.9"	"100.000"	"84.9019"	"29503"	"29503"	"29485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.2"	""	"26.4"	""	"27.5"	""	"32.2"	""	"33.8"	"32.2"	""	"590"	"52"	"34.000"	"27.000"	"0.000185277215849929"	"25"	"0"	"9.257E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8197"	"0.0000"	"1"	"1"	"1"	"480.95035"	"1440.83649"	"1440.83719"	"-0.49"	"-0.00023"	"13/106"	"13"	"106"	"2343537.57904053"	"HCD"	"MS2"	"5.465271"	"27.9"	"100.000"	"85.2022"	"29596"	"29596"	"29575"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"40.1"	""	"44.6"	""	"44.9"	""	"46.9"	"46.3"	""	"590"	"61"	"34.000"	"27.000"	"2.1818355614218E-05"	"27"	"0"	"7.267E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"720.92206"	"1440.83684"	"1440.83719"	"-0.25"	"-0.00018"	"8/106"	"8"	"106"	"1051228.06085205"	"HCD"	"MS2"	"14.60014"	"47.9"	"100.000"	"84.6777"	"29414"	"29414"	"29393"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.6"	""	"72.0"	""	"56.9"	""	"79.2"	"1.1"	"80.7"	"77.8"	""	"590"	"47"	"34.000"	"27.000"	"0.0006149248105137"	"21"	"0"	"6.364E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"480.95050"	"1440.83695"	"1440.83719"	"-0.17"	"-0.00008"	"11/106"	"11"	"106"	"2383185.0211792"	"HCD"	"MS2"	"5.07986"	"27.6"	"100.000"	"85.1991"	"29624"	"29624"	"29605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"41.4"	""	"42.6"	""	"49.5"	""	"41.3"	"48.0"	""	"590"	"57"	"34.000"	"27.000"	"5.71244479364248E-05"	"27"	"0"	"3.789E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"720.92218"	"1440.83708"	"1440.83719"	"-0.08"	"-0.00005"	"10/106"	"10"	"106"	"7612973.97576904"	"HCD"	"MS2"	"0"	"292.0"	"100.000"	"85.2691"	"29624"	"29624"	"29607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"503.4"	""	"404.1"	""	"472.7"	""	"446.3"	"1.3"	"476.1"	"454.8"	""	"576"	"51"	"34.000"	"27.000"	"0.000247395894193554"	""	"0"	"6.818E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"720.92236"	"1440.83745"	"1440.83719"	"0.18"	"0.00013"	"8/106"	"8"	"106"	"968644.509277344"	"HCD"	"MS2"	"7.432435"	"46.1"	"100.000"	"84.6714"	"29383"	"29383"	"29363"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.0"	""	"62.5"	""	"70.4"	""	"81.2"	""	"78.3"	"69.4"	""	"576"	"48"	"34.000"	"27.000"	"0.000466007050841203"	""	"0"	"2.308E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"720.92236"	"1440.83745"	"1440.83719"	"0.18"	"0.00013"	"16/106"	"16"	"106"	"10589235.3096313"	"HCD"	"MS2"	"0.1716959"	"349.8"	"90.541"	"84.9603"	"29498"	"29498"	"29487"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"663.7"	""	"511.9"	""	"537.4"	""	"560.4"	"1.6"	"536.5"	"489.7"	""	"576"	"55"	"34.000"	"27.000"	"9.17048886257124E-05"	"22"	"0"	"1.728E-06"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"720.92249"	"1440.83769"	"1440.83719"	"0.35"	"0.00025"	"9/106"	"9"	"106"	"7654813.23474121"	"HCD"	"MS2"	"0"	"297.8"	"100.000"	"85.2707"	"29654"	"29654"	"29637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"528.1"	""	"394.6"	""	"469.4"	""	"477.2"	""	"473.5"	"470.8"	""	"572"	"51"	"34.000"	"27.000"	"0.000254897768306251"	"27"	"0"	"1.981E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"720.92267"	"1440.83806"	"1440.83719"	"0.60"	"0.00043"	"9/106"	"9"	"106"	"10666431.1234131"	"HCD"	"MS2"	"0"	"399.6"	"100.000"	"84.9710"	"29532"	"29532"	"29515"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"718.2"	""	"590.9"	""	"615.9"	""	"650.4"	""	"607.1"	"591.3"	""	"572"	"53"	"34.000"	"27.000"	"0.000140723307204895"	"27"	"0"	"4.037E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLMEYAK"	"[R].nDLMEYAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.7234"	"0.0000"	"1"	"1"	"1"	"721.39111"	"1441.77495"	"1441.77612"	"-0.81"	"-0.00059"	"14/76"	"14"	"76"	"697981.541503906"	"HCD"	"MS2"	"11.22255"	"69.4"	"100.000"	"80.6420"	"27782"	"27782"	"27764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.3"	""	"93.1"	""	"98.0"	""	"79.6"	""	"134.9"	"137.3"	""	"783"	"47"	"35.000"	"28.000"	"0.000702638214904933"	""	"0"	"0.000313"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLMEYAK"	"[R].nDLMEYAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"721.39142"	"1441.77556"	"1441.77612"	"-0.39"	"-0.00028"	"14/76"	"14"	"76"	"673793.668701172"	"HCD"	"MS2"	"18.64313"	"64.6"	"100.000"	"80.6030"	"27739"	"27739"	"27721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"110.9"	""	"75.7"	""	"78.8"	""	"75.0"	""	"129.9"	"143.0"	""	"786"	"46"	"35.000"	"28.000"	"0.000975871310381159"	"28"	"0"	"0.0001748"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLMEYAK"	"[R].nDLMEYAk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"721.39178"	"1441.77629"	"1441.77612"	"0.12"	"0.00009"	"14/76"	"14"	"76"	"367221.572631836"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"80.9488"	"27907"	"27907"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"48.4"	""	"40.8"	""	"45.0"	""	"63.8"	"72.8"	""	"801"	"50"	"36.000"	"29.000"	"0.000407945850915673"	"26"	"0"	"0.000168"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"721.40088"	"1441.79448"	"1441.80008"	"-3.88"	"-0.00280"	"13/102"	"13"	"102"	"865729.442138672"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"77.1796"	"26349"	"26349"	"26336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.9"	""	"65.1"	""	"59.6"	""	"60.8"	"2.0"	"81.1"	"71.8"	""	"765"	"50"	"35.000"	"28.000"	"0.000374654919418827"	"19"	"0"	"9.203E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40210"	"1441.79692"	"1441.80008"	"-2.19"	"-0.00158"	"8/102"	"8"	"102"	"1245343.91986084"	"HCD"	"MS2"	"28.98092"	"58.0"	"100.000"	"69.9143"	"23403"	"23403"	"23388"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"82.7"	""	"66.1"	""	"99.0"	""	"110.7"	"104.1"	""	"800"	"42"	"36.000"	"29.000"	"0.00232305767008525"	"15"	"0"	"0.0002027"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"721.40222"	"1441.79717"	"1441.80008"	"-2.02"	"-0.00146"	"8/102"	"8"	"102"	"1064343.44610596"	"HCD"	"MS2"	"0"	"54.5"	"100.000"	"77.3130"	"26432"	"26432"	"26417"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.5"	""	"78.2"	""	"77.9"	""	"94.5"	"0.7"	"82.6"	"92.9"	""	"808"	"44"	"36.000"	"29.000"	"0.00155017727178881"	"19"	"0"	"5.838E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"481.27078"	"1441.79779"	"1441.80008"	"-1.59"	"-0.00076"	"12/102"	"12"	"102"	"822803.013916016"	"HCD"	"MS2"	"23.72711"	"15.1"	"100.000"	"76.9618"	"26263"	"26263"	"26251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"19.0"	""	"21.0"	""	"23.8"	""	"29.5"	"28.8"	""	"798"	"30"	"36.000"	"29.000"	"0.0369805099528361"	"15"	"0"	"0.0003764"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"481.27090"	"1441.79816"	"1441.80008"	"-1.33"	"-0.00064"	"7/102"	"7"	"102"	"6656887.81811523"	"HCD"	"MS2"	"4.301175"	"31.9"	"100.000"	"72.0933"	"24316"	"24316"	"24298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.1"	""	"54.2"	""	"36.4"	""	"56.2"	""	"52.9"	"56.6"	""	"795"	"51"	"35.000"	"29.000"	"0.000323844952898284"	"22"	"0"	"1.744E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"481.27097"	"1441.79834"	"1441.80008"	"-1.20"	"-0.00058"	"12/102"	"12"	"102"	"590261.847167969"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"77.3146"	"26403"	"26403"	"26387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"15.1"	""	"17.1"	""	"25.1"	""	"24.0"	"25.9"	""	"793"	"47"	"35.000"	"28.000"	"0.000885611386352307"	"17"	"0"	"0.0001361"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"721.40289"	"1441.79851"	"1441.80008"	"-1.09"	"-0.00079"	"14/102"	"14"	"102"	"970965.257141113"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"77.0112"	"26315"	"26315"	"26303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.1"	""	"75.8"	""	"61.2"	""	"76.9"	""	"79.3"	"78.2"	""	"791"	"54"	"35.000"	"28.000"	"0.000158178148530514"	"18"	"0"	"1.87E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9792"	"0.0000"	"1"	"1"	"1"	"481.27106"	"1441.79862"	"1441.80008"	"-1.01"	"-0.00049"	"11/102"	"11"	"102"	"1741820.84667969"	"HCD"	"MS2"	"12.9133"	"23.8"	"100.000"	"76.3559"	"26049"	"26049"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"34.5"	""	"33.8"	""	"40.1"	""	"46.0"	"43.0"	""	"797"	"48"	"36.000"	"29.000"	"0.000611544867645519"	"16"	"0"	"3.112E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"481.27109"	"1441.79871"	"1441.80008"	"-0.95"	"-0.00046"	"11/102"	"11"	"102"	"4788877.98327637"	"HCD"	"MS2"	"1.772164"	"34.0"	"100.000"	"71.1836"	"23950"	"23950"	"23932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.2"	""	"48.3"	""	"42.2"	""	"51.2"	""	"69.5"	"64.5"	""	"797"	"50"	"36.000"	"29.000"	"0.000355982235267718"	"21"	"0"	"2.146E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"481.27109"	"1441.79871"	"1441.80008"	"-0.95"	"-0.00046"	"13/102"	"13"	"102"	"5628332.65386963"	"HCD"	"MS2"	"2.010119"	"33.2"	"100.000"	"73.9396"	"25038"	"25038"	"25022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"44.2"	""	"45.4"	""	"54.4"	""	"60.2"	"53.7"	""	"797"	"48"	"36.000"	"29.000"	"0.000612954624160759"	"23"	"0"	"1.722E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"721.40302"	"1441.79875"	"1441.80008"	"-0.92"	"-0.00066"	"9/102"	"9"	"102"	"882676.690917969"	"HCD"	"MS2"	"38.52634"	"48.8"	"100.000"	"77.5369"	"26492"	"26492"	"26478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.7"	""	"65.0"	""	"73.1"	""	"72.8"	""	"82.2"	"85.4"	""	"800"	"31"	"36.000"	"29.000"	"0.0312651121835332"	"27"	"0"	"0.0001188"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40302"	"1441.79875"	"1441.80008"	"-0.92"	"-0.00066"	"13/102"	"13"	"102"	"1236212.58862305"	"HCD"	"MS2"	"28.04919"	"59.9"	"100.000"	"70.0316"	"23485"	"23485"	"23465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.9"	""	"83.5"	""	"79.2"	""	"93.6"	"0.8"	"113.7"	"104.9"	""	"800"	"46"	"36.000"	"29.000"	"0.00112735317250578"	"15"	"0"	"2.132E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"481.27112"	"1441.79880"	"1441.80008"	"-0.89"	"-0.00043"	"13/102"	"13"	"102"	"6188456.04510498"	"HCD"	"MS2"	"4.497261"	"37.9"	"100.000"	"71.7707"	"24189"	"24189"	"24171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.6"	""	"57.7"	""	"46.0"	""	"67.9"	""	"66.6"	"62.9"	""	"800"	"51"	"36.000"	"29.000"	"0.000307652176114644"	"22"	"0"	"1.313E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"721.40308"	"1441.79888"	"1441.80008"	"-0.84"	"-0.00060"	"14/102"	"14"	"102"	"1824307.83068848"	"HCD"	"MS2"	"2.952592"	"73.7"	"100.000"	"76.1959"	"25953"	"25953"	"25936"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.1"	""	"122.5"	""	"89.9"	""	"131.2"	""	"127.5"	"109.8"	""	"800"	"54"	"36.000"	"29.000"	"0.000145231221908041"	"18"	"0"	"1.833E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40308"	"1441.79888"	"1441.80008"	"-0.84"	"-0.00060"	"13/102"	"13"	"102"	"6687392.89782715"	"HCD"	"MS2"	"0"	"219.7"	"100.000"	"72.0866"	"24314"	"24314"	"24298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"405.8"	""	"371.6"	""	"272.4"	""	"354.5"	""	"347.4"	"325.1"	""	"800"	"45"	"36.000"	"29.000"	"0.00112995198996628"	"15"	"0"	"6.916E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"481.27115"	"1441.79889"	"1441.80008"	"-0.82"	"-0.00040"	"12/102"	"12"	"102"	"5666781.51196289"	"HCD"	"MS2"	"1.969052"	"38.3"	"100.000"	"71.4715"	"24067"	"24067"	"24050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.3"	""	"51.4"	""	"47.5"	""	"64.6"	"2.9"	"64.9"	"63.1"	""	"800"	"44"	"36.000"	"29.000"	"0.00171419408158976"	"19"	"0"	"8.328E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"481.27118"	"1441.79898"	"1441.80008"	"-0.76"	"-0.00037"	"13/102"	"13"	"102"	"4344186.76245117"	"HCD"	"MS2"	"2.498398"	"23.5"	"100.000"	"74.5272"	"25276"	"25276"	"25262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.3"	""	"40.5"	""	"28.1"	""	"34.3"	""	"39.7"	"44.9"	""	"804"	"50"	"36.000"	"29.000"	"0.000443839605200633"	"22"	"0"	"4.476E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"481.27118"	"1441.79898"	"1441.80008"	"-0.76"	"-0.00037"	"12/102"	"12"	"102"	"3768231.79150391"	"HCD"	"MS2"	"5.998291"	"36.2"	"100.000"	"70.8883"	"23831"	"23831"	"23813"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"50.0"	""	"45.3"	""	"55.2"	""	"73.5"	"66.2"	""	"804"	"40"	"36.000"	"29.000"	"0.00399232651465215"	"16"	"0"	"3.445E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"481.27118"	"1441.79898"	"1441.80008"	"-0.76"	"-0.00037"	"13/102"	"13"	"102"	"5179269.97247314"	"HCD"	"MS2"	"3.880678"	"26.2"	"100.000"	"74.2078"	"25176"	"25176"	"25158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"42.1"	""	"31.5"	""	"47.4"	"1.3"	"47.3"	"41.3"	""	"804"	"48"	"36.000"	"29.000"	"0.000615497159596176"	"21"	"0"	"1.525E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"721.40314"	"1441.79900"	"1441.80008"	"-0.75"	"-0.00054"	"13/102"	"13"	"102"	"1007924.68481445"	"HCD"	"MS2"	"0"	"48.1"	"100.000"	"76.8861"	"26233"	"26233"	"26228"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.2"	""	"75.5"	""	"65.6"	""	"82.4"	""	"84.3"	"70.1"	""	"804"	"46"	"36.000"	"29.000"	"0.000904119951545985"	"18"	"0"	"5.314E-06"	"0.916"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"481.27121"	"1441.79908"	"1441.80008"	"-0.70"	"-0.00033"	"11/102"	"11"	"102"	"961004.294616699"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"76.9402"	"26287"	"26287"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"23.0"	""	"22.2"	""	"29.6"	""	"32.2"	"28.0"	""	"804"	"34"	"36.000"	"29.000"	"0.0173870560076073"	"15"	"0"	"0.0003748"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"481.27121"	"1441.79908"	"1441.80008"	"-0.70"	"-0.00033"	"13/102"	"13"	"102"	"7041893.27233887"	"HCD"	"MS2"	"1.608701"	"34.9"	"100.000"	"72.7199"	"24540"	"24540"	"24523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.0"	""	"59.4"	""	"49.1"	""	"54.0"	"1.4"	"57.5"	"53.1"	""	"804"	"51"	"36.000"	"29.000"	"0.000308479318723451"	"22"	"0"	"1.448E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"481.27121"	"1441.79908"	"1441.80008"	"-0.70"	"-0.00033"	"11/102"	"11"	"102"	"6292841.32086182"	"HCD"	"MS2"	"2.374764"	"34.7"	"100.000"	"73.6471"	"24919"	"24919"	"24905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.9"	""	"61.4"	""	"43.7"	""	"57.0"	"1.0"	"49.8"	"58.3"	""	"804"	"47"	"36.000"	"29.000"	"0.000897896033577874"	"21"	"0"	"1.082E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"721.40320"	"1441.79912"	"1441.80008"	"-0.67"	"-0.00048"	"14/102"	"14"	"102"	"3886193.88183594"	"HCD"	"MS2"	"0"	"160.1"	"100.000"	"70.8839"	"23830"	"23830"	"23813"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.2"	""	"246.5"	""	"193.0"	""	"257.2"	"0.9"	"286.3"	"254.9"	""	"804"	"46"	"36.000"	"29.000"	"0.000906204163285277"	"16"	"0"	"3.256E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"481.27124"	"1441.79917"	"1441.80008"	"-0.63"	"-0.00030"	"13/102"	"13"	"102"	"3096532.8092041"	"HCD"	"MS2"	"9.022647"	"19.3"	"100.000"	"75.4135"	"25666"	"25666"	"25651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"27.2"	""	"22.8"	""	"38.5"	""	"31.2"	"33.0"	""	"804"	"44"	"36.000"	"29.000"	"0.00145621685363513"	"16"	"0"	"2.018E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"481.27124"	"1441.79917"	"1441.80008"	"-0.63"	"-0.00030"	"11/102"	"11"	"102"	"3291001.04669189"	"HCD"	"MS2"	"6.518168"	"19.9"	"100.000"	"75.0967"	"25506"	"25506"	"25492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.5"	""	"25.5"	""	"31.7"	""	"28.1"	"0.6"	"37.8"	"32.7"	""	"804"	"46"	"36.000"	"29.000"	"0.00092305175654117"	"21"	"0"	"1.598E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"481.27124"	"1441.79917"	"1441.80008"	"-0.63"	"-0.00030"	"13/102"	"13"	"102"	"1649989.32873535"	"HCD"	"MS2"	"46.96978"	"47.4"	"100.000"	"69.9924"	"23469"	"23469"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.5"	""	"49.5"	""	"54.2"	""	"71.7"	"1.4"	"117.8"	"98.7"	""	"804"	"29"	"36.000"	"29.000"	"0.0471222536950349"	"15"	"0"	"4.095E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"481.27124"	"1441.79917"	"1441.80008"	"-0.63"	"-0.00030"	"13/102"	"13"	"102"	"6311234.75390625"	"HCD"	"MS2"	"2.645973"	"35.3"	"100.000"	"71.7872"	"24165"	"24165"	"24145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.7"	""	"52.1"	""	"43.7"	""	"61.4"	""	"66.7"	"53.2"	""	"804"	"51"	"36.000"	"29.000"	"0.000309190436995217"	"22"	"0"	"6.668E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"481.27124"	"1441.79917"	"1441.80008"	"-0.63"	"-0.00030"	"13/102"	"13"	"102"	"7082135.44787598"	"HCD"	"MS2"	"1.660046"	"32.8"	"100.000"	"72.4147"	"24417"	"24417"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.4"	""	"51.0"	""	"42.5"	""	"57.2"	"1.3"	"57.6"	"51.8"	""	"804"	"45"	"36.000"	"29.000"	"0.00137475735890511"	"19"	"0"	"2.011E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"721.40326"	"1441.79924"	"1441.80008"	"-0.58"	"-0.00042"	"14/102"	"14"	"102"	"2184376.5760498"	"HCD"	"MS2"	"3.331764"	"88.6"	"100.000"	"75.9097"	"25836"	"25836"	"25817"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.4"	""	"159.0"	""	"113.7"	""	"134.4"	""	"137.7"	"135.0"	""	"802"	"54"	"36.000"	"29.000"	"0.000148985626867966"	"19"	"0"	"2.229E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9608"	"0.0000"	"1"	"1"	"1"	"721.40326"	"1441.79924"	"1441.80008"	"-0.58"	"-0.00042"	"14/102"	"14"	"102"	"6111055.01293945"	"HCD"	"MS2"	"0"	"208.6"	"100.000"	"71.7663"	"24188"	"24188"	"24171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"398.3"	""	"362.3"	""	"262.7"	""	"326.3"	""	"332.3"	"289.2"	""	"802"	"51"	"36.000"	"29.000"	"0.000349256399572388"	"18"	"0"	"1.529E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"481.27127"	"1441.79926"	"1441.80008"	"-0.57"	"-0.00027"	"12/102"	"12"	"102"	"1915663.22106934"	"HCD"	"MS2"	"8.583278"	"23.1"	"100.000"	"75.9907"	"25869"	"25869"	"25849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"29.0"	""	"32.2"	""	"41.2"	"0.4"	"37.4"	"48.7"	""	"802"	"46"	"36.000"	"29.000"	"0.000973070648128049"	"20"	"0"	"1.859E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"481.27127"	"1441.79926"	"1441.80008"	"-0.57"	"-0.00027"	"11/102"	"11"	"102"	"2836197.87322998"	"HCD"	"MS2"	"4.302307"	"26.9"	"100.000"	"70.6050"	"23717"	"23717"	"23701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.3"	""	"42.0"	""	"41.8"	""	"47.5"	""	"44.2"	"49.4"	""	"802"	"46"	"36.000"	"29.000"	"0.000940035754943289"	"20"	"0"	"1.094E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"481.27127"	"1441.79926"	"1441.80008"	"-0.57"	"-0.00027"	"7/102"	"7"	"102"	"6493422.17199707"	"HCD"	"MS2"	"3.108944"	"30.8"	"100.000"	"73.2977"	"24805"	"24805"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"52.9"	""	"41.6"	""	"47.7"	"0.8"	"48.4"	"46.0"	""	"802"	"49"	"36.000"	"29.000"	"0.000507159275335932"	"22"	"0"	"1.309E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"481.27130"	"1441.79935"	"1441.80008"	"-0.51"	"-0.00024"	"13/102"	"13"	"102"	"3311609.90600586"	"HCD"	"MS2"	"3.468594"	"20.7"	"100.000"	"75.1001"	"25538"	"25538"	"25518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"30.1"	""	"24.7"	""	"37.7"	""	"35.2"	"32.5"	""	"802"	"48"	"36.000"	"29.000"	"0.000673200411267147"	"20"	"0"	"1.207E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"481.27130"	"1441.79935"	"1441.80008"	"-0.51"	"-0.00024"	"7/102"	"7"	"102"	"4341302.00622559"	"HCD"	"MS2"	"4.34688"	"35.1"	"100.000"	"70.8776"	"23795"	"23795"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"45.0"	""	"45.5"	""	"63.7"	""	"68.1"	"65.7"	""	"802"	"53"	"36.000"	"29.000"	"0.000208038815610513"	"21"	"0"	"1.085E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"481.27130"	"1441.79935"	"1441.80008"	"-0.51"	"-0.00024"	"12/102"	"12"	"102"	"5264150.38922119"	"HCD"	"MS2"	"1.070662"	"33.0"	"100.000"	"71.1818"	"23919"	"23919"	"23902"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.1"	""	"43.1"	""	"41.1"	""	"54.9"	"1.6"	"59.9"	"60.5"	""	"802"	"45"	"36.000"	"29.000"	"0.00117799751043657"	"21"	"0"	"1.989E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40332"	"1441.79936"	"1441.80008"	"-0.50"	"-0.00036"	"14/102"	"14"	"102"	"1992890.31072998"	"HCD"	"MS2"	"3.7887"	"75.1"	"100.000"	"76.2314"	"25999"	"25999"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.7"	""	"121.1"	""	"99.4"	""	"119.1"	"1.6"	"117.6"	"107.8"	""	"802"	"54"	"36.000"	"29.000"	"0.000146941467433781"	"16"	"0"	"4.904E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"721.40332"	"1441.79936"	"1441.80008"	"-0.50"	"-0.00036"	"13/102"	"13"	"102"	"2698082.31896973"	"HCD"	"MS2"	"3.128096"	"117.4"	"100.000"	"70.6006"	"23716"	"23716"	"23701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.8"	""	"180.8"	""	"151.8"	""	"191.3"	""	"202.4"	"190.4"	""	"802"	"45"	"36.000"	"29.000"	"0.00133089677478597"	"17"	"0"	"2.459E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"721.40332"	"1441.79936"	"1441.80008"	"-0.50"	"-0.00036"	"15/102"	"15"	"102"	"4531142.80865479"	"HCD"	"MS2"	"0.4704449"	"167.9"	"100.000"	"71.1792"	"23949"	"23949"	"23932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"301.7"	""	"294.6"	""	"213.4"	""	"244.0"	"1.5"	"272.8"	"258.6"	""	"802"	"58"	"36.000"	"29.000"	"6.02759928402099E-05"	"18"	"0"	"2.851E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"481.27133"	"1441.79944"	"1441.80008"	"-0.44"	"-0.00021"	"11/102"	"11"	"102"	"3669077.34655762"	"HCD"	"MS2"	"2.174952"	"21.7"	"100.000"	"74.8175"	"25392"	"25392"	"25375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"33.1"	""	"24.9"	""	"40.6"	""	"41.2"	"33.8"	""	"802"	"49"	"36.000"	"29.000"	"0.000556089087377627"	"22"	"0"	"4.202E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"481.27133"	"1441.79944"	"1441.80008"	"-0.44"	"-0.00021"	"11/102"	"11"	"102"	"2456439.2010498"	"HCD"	"MS2"	"5.391578"	"19.7"	"100.000"	"75.7312"	"25795"	"25795"	"25777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"32.2"	""	"23.3"	""	"31.3"	""	"34.6"	"41.9"	""	"802"	"51"	"36.000"	"29.000"	"0.000338956816909276"	"20"	"0"	"5.461E-06"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"481.27133"	"1441.79944"	"1441.80008"	"-0.44"	"-0.00021"	"13/102"	"13"	"102"	"6240840.45562744"	"HCD"	"MS2"	"1.292003"	"29.1"	"100.000"	"73.6042"	"24930"	"24930"	"24913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.8"	""	"48.5"	""	"37.7"	""	"49.5"	""	"49.8"	"41.2"	""	"802"	"48"	"36.000"	"29.000"	"0.00060973955942273"	"21"	"0"	"1.496E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"481.27133"	"1441.79944"	"1441.80008"	"-0.44"	"-0.00021"	"7/102"	"7"	"102"	"5969906.20788574"	"HCD"	"MS2"	"2.915315"	"34.6"	"100.000"	"73.9060"	"25053"	"25053"	"25035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.4"	""	"45.7"	""	"54.7"	""	"53.3"	"0.0"	"52.7"	"53.9"	""	"802"	"49"	"36.000"	"29.000"	"0.000516588070228947"	"20"	"0"	"6.374E-06"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"721.40338"	"1441.79949"	"1441.80008"	"-0.41"	"-0.00030"	"8/102"	"8"	"102"	"6132613.87036133"	"HCD"	"MS2"	"0"	"211.4"	"100.000"	"71.7067"	"24133"	"24133"	"24116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"381.5"	""	"358.9"	""	"264.3"	""	"328.3"	"0.7"	"348.3"	"315.8"	""	"802"	"43"	"36.000"	"29.000"	"0.00182030588276731"	"16"	"0"	"4.357E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"481.27136"	"1441.79953"	"1441.80008"	"-0.38"	"-0.00018"	"13/102"	"13"	"102"	"2327705.34973145"	"HCD"	"MS2"	"12.9099"	"23.7"	"100.000"	"70.2877"	"23555"	"23555"	"23541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.0"	""	"35.4"	""	"23.8"	""	"36.6"	""	"49.6"	"47.7"	""	"802"	"50"	"36.000"	"29.000"	"0.000364875222325533"	"19"	"0"	"1.042E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"481.27136"	"1441.79953"	"1441.80008"	"-0.38"	"-0.00018"	"7/102"	"7"	"102"	"6834461.86535645"	"HCD"	"MS2"	"2.357279"	"34.7"	"100.000"	"72.1037"	"24290"	"24290"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.9"	""	"54.2"	""	"42.5"	""	"53.5"	""	"59.4"	"61.0"	""	"802"	"55"	"36.000"	"29.000"	"0.000119989811927988"	"22"	"0"	"3.605E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40344"	"1441.79961"	"1441.80008"	"-0.33"	"-0.00024"	"13/102"	"13"	"102"	"1852987.15478516"	"HCD"	"MS2"	"16.98668"	"75.7"	"100.000"	"70.3265"	"23605"	"23605"	"23592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.5"	""	"128.4"	""	"80.4"	""	"120.0"	""	"145.1"	"124.8"	""	"802"	"45"	"36.000"	"29.000"	"0.00134321141102289"	"15"	"0"	"1.741E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"721.40344"	"1441.79961"	"1441.80008"	"-0.33"	"-0.00024"	"14/102"	"14"	"102"	"4215086.47149658"	"HCD"	"MS2"	"0.5899702"	"178.5"	"100.000"	"70.8084"	"23767"	"23767"	"23754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"297.2"	""	"297.3"	""	"212.7"	""	"294.9"	""	"313.2"	"273.1"	""	"802"	"52"	"36.000"	"29.000"	"0.00025185140188414"	"18"	"0"	"2.426E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40344"	"1441.79961"	"1441.80008"	"-0.33"	"-0.00024"	"15/102"	"15"	"102"	"7250162.45928955"	"HCD"	"MS2"	"0"	"239.8"	"100.000"	"72.9116"	"24619"	"24619"	"24602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"445.8"	""	"422.1"	""	"287.5"	""	"388.5"	"0.6"	"375.5"	"344.2"	""	"802"	"61"	"36.000"	"29.000"	"3.38177237863474E-05"	"16"	"0"	"6.773E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"481.27139"	"1441.79963"	"1441.80008"	"-0.32"	"-0.00015"	"12/102"	"12"	"102"	"1950149.61071777"	"HCD"	"MS2"	"3.557686"	"22.5"	"100.000"	"76.0309"	"25917"	"25917"	"25897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"32.3"	""	"28.4"	""	"31.6"	""	"50.1"	"37.4"	""	"802"	"42"	"36.000"	"29.000"	"0.00263720792779524"	"16"	"0"	"2.43E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"14/102"	"14"	"102"	"2368423.39904785"	"HCD"	"MS2"	"1.688699"	"88.8"	"100.000"	"75.9498"	"25884"	"25884"	"25865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.9"	""	"151.0"	""	"110.0"	""	"137.9"	""	"151.3"	"136.2"	""	"793"	"52"	"35.000"	"28.000"	"0.000229743478133259"	"18"	"0"	"2.136E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"14/102"	"14"	"102"	"5335711.06756592"	"HCD"	"MS2"	"0"	"175.0"	"100.000"	"74.2033"	"25175"	"25175"	"25158"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"303.5"	""	"304.7"	""	"224.3"	""	"277.8"	"1.3"	"289.5"	"252.7"	""	"793"	"53"	"35.000"	"28.000"	"0.000216392991922689"	"18"	"0"	"4.015E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"9/102"	"9"	"102"	"4094013.78057861"	"HCD"	"MS2"	"30.50569"	"170.8"	"100.000"	"75.2926"	"25586"	"25586"	"25569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"280.7"	""	"269.7"	""	"210.5"	""	"279.0"	"0.4"	"299.0"	"276.4"	""	"793"	"58"	"35.000"	"28.000"	"5.87818420760371E-05"	"20"	"0"	"3.174E-06"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9796"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"14/102"	"14"	"102"	"5924681.24694824"	"HCD"	"MS2"	"0"	"199.6"	"100.000"	"73.8313"	"24994"	"24994"	"24977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"360.1"	""	"354.0"	""	"250.4"	""	"315.3"	"4.1"	"315.1"	"286.5"	""	"793"	"49"	"35.000"	"28.000"	"0.000547322360915044"	"17"	"0"	"3.153E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"721.40350"	"1441.79973"	"1441.80008"	"-0.24"	"-0.00017"	"13/102"	"13"	"102"	"5582969.59436035"	"HCD"	"MS2"	"9.856598"	"194.1"	"100.000"	"71.4648"	"24065"	"24065"	"24050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"334.0"	""	"338.8"	""	"240.4"	""	"314.9"	"0.6"	"320.5"	"285.5"	""	"793"	"49"	"35.000"	"28.000"	"0.000507274687098459"	"17"	"0"	"3.205E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"481.27145"	"1441.79981"	"1441.80008"	"-0.19"	"-0.00009"	"13/102"	"13"	"102"	"5103885.37567139"	"HCD"	"MS2"	"3.082167"	"28.0"	"100.000"	"74.2369"	"25159"	"25159"	"25142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.9"	""	"49.2"	""	"36.6"	""	"50.7"	""	"46.3"	"41.2"	""	"798"	"53"	"36.000"	"29.000"	"0.000209398176639659"	"21"	"0"	"6.097E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"481.27145"	"1441.79981"	"1441.80008"	"-0.19"	"-0.00009"	"13/102"	"13"	"102"	"6898731.06207275"	"HCD"	"MS2"	"2.704538"	"31.9"	"100.000"	"72.9981"	"24683"	"24683"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.3"	""	"49.5"	""	"37.2"	""	"49.3"	""	"55.1"	"58.4"	""	"798"	"46"	"36.000"	"29.000"	"0.000905676075901646"	"21"	"0"	"6.888E-06"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40356"	"1441.79985"	"1441.80008"	"-0.16"	"-0.00011"	"9/102"	"9"	"102"	"2222312.76361084"	"HCD"	"MS2"	"17.54979"	"91.4"	"100.000"	"70.2185"	"23527"	"23527"	"23512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.0"	""	"143.4"	""	"103.8"	""	"142.1"	""	"170.3"	"146.0"	""	"798"	"55"	"36.000"	"29.000"	"0.00012941150732239"	"16"	"0"	"6.762E-07"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"721.40356"	"1441.79985"	"1441.80008"	"-0.16"	"-0.00011"	"9/102"	"9"	"102"	"4778508.67694092"	"HCD"	"MS2"	"0"	"163.4"	"100.000"	"74.4211"	"25233"	"25233"	"25224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.7"	""	"283.7"	""	"188.3"	""	"275.0"	"1.1"	"275.4"	"233.3"	""	"798"	"55"	"36.000"	"29.000"	"0.000135510483763573"	"17"	"0"	"2.588E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"721.40356"	"1441.79985"	"1441.80008"	"-0.16"	"-0.00011"	"15/102"	"15"	"102"	"6574436.44659424"	"HCD"	"MS2"	"0"	"208.8"	"100.000"	"73.5997"	"24929"	"24929"	"24913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"368.4"	""	"355.2"	""	"261.9"	""	"335.7"	""	"346.8"	"306.7"	""	"798"	"61"	"36.000"	"29.000"	"3.39604077242748E-05"	"18"	"0"	"5.249E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40356"	"1441.79985"	"1441.80008"	"-0.16"	"-0.00011"	"15/102"	"15"	"102"	"6904454.28863525"	"HCD"	"MS2"	"0"	"237.5"	"100.000"	"72.2964"	"24369"	"24369"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"441.1"	""	"397.6"	""	"282.4"	""	"385.1"	"1.2"	"381.0"	"355.1"	""	"798"	"58"	"36.000"	"29.000"	"5.82066889849864E-05"	"16"	"0"	"1.459E-06"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"481.27148"	"1441.79990"	"1441.80008"	"-0.12"	"-0.00006"	"13/102"	"13"	"102"	"4434709.33538818"	"HCD"	"MS2"	"2.14327"	"24.1"	"100.000"	"74.4934"	"25292"	"25292"	"25277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.5"	""	"37.3"	""	"30.8"	""	"36.5"	""	"39.8"	"41.7"	""	"793"	"48"	"35.000"	"28.000"	"0.000607076178556925"	"21"	"0"	"1.23E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"481.27148"	"1441.79990"	"1441.80008"	"-0.12"	"-0.00006"	"7/102"	"7"	"102"	"6708904.23944092"	"HCD"	"MS2"	"3.335645"	"31.5"	"100.000"	"73.0293"	"24667"	"24667"	"24650"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.8"	""	"49.9"	""	"41.1"	""	"52.4"	""	"53.6"	"48.0"	""	"793"	"51"	"35.000"	"28.000"	"0.000324521288495445"	"21"	"0"	"4.602E-06"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"481.27151"	"1441.79999"	"1441.80008"	"-0.06"	"-0.00003"	"13/102"	"13"	"102"	"2206889.47991943"	"HCD"	"MS2"	"5.305554"	"18.0"	"100.000"	"75.6931"	"25748"	"25748"	"25735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.9"	""	"26.0"	""	"23.4"	""	"29.3"	"1.3"	"34.1"	"32.0"	""	"790"	"53"	"35.000"	"28.000"	"0.000215574355131052"	"24"	"0"	"1.269E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"721.40363"	"1441.79997"	"1441.80008"	"-0.07"	"-0.00005"	"13/102"	"13"	"102"	"4527299.57385254"	"HCD"	"MS2"	"1.74305"	"161.7"	"100.000"	"71.1079"	"23888"	"23888"	"23870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"285.4"	""	"276.1"	""	"188.9"	""	"255.9"	"0.7"	"262.8"	"258.5"	""	"790"	"47"	"35.000"	"28.000"	"0.000819590839394689"	"18"	"0"	"1.947E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"721.40363"	"1441.79997"	"1441.80008"	"-0.07"	"-0.00005"	"9/102"	"9"	"102"	"6466465.7333374"	"HCD"	"MS2"	"0"	"208.7"	"100.000"	"73.5364"	"24874"	"24874"	"24858"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"377.9"	""	"365.7"	""	"261.0"	""	"319.9"	""	"346.6"	"302.9"	""	"790"	"57"	"35.000"	"28.000"	"7.63127485221684E-05"	"18"	"0"	"3.799E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40363"	"1441.79997"	"1441.80008"	"-0.07"	"-0.00005"	"15/102"	"15"	"102"	"5573250.34393311"	"HCD"	"MS2"	"8.759136"	"196.5"	"100.000"	"71.3960"	"24006"	"24006"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"354.5"	""	"326.7"	""	"232.7"	""	"318.9"	""	"320.0"	"305.8"	""	"790"	"63"	"35.000"	"28.000"	"2.15574355131052E-05"	"16"	"0"	"2.321E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40363"	"1441.79997"	"1441.80008"	"-0.07"	"-0.00005"	"14/102"	"14"	"102"	"7113102.72723389"	"HCD"	"MS2"	"0"	"226.4"	"100.000"	"72.6049"	"24494"	"24494"	"24480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"413.2"	""	"398.3"	""	"272.6"	""	"365.0"	""	"360.1"	"331.4"	""	"790"	"51"	"35.000"	"28.000"	"0.000343239369568089"	"16"	"0"	"4.958E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"721.40369"	"1441.80010"	"1441.80008"	"0.01"	"0.00001"	"10/102"	"10"	"102"	"3001102.15979004"	"HCD"	"MS2"	"18.14085"	"133.9"	"100.000"	"75.6530"	"25763"	"25763"	"25745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.5"	""	"214.1"	""	"161.5"	""	"209.5"	""	"229.4"	"219.4"	""	"790"	"46"	"35.000"	"28.000"	"0.00107546701669077"	"16"	"0"	"1.224E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40369"	"1441.80010"	"1441.80008"	"0.01"	"0.00001"	"9/102"	"9"	"102"	"4226294.51715088"	"HCD"	"MS2"	"0"	"147.1"	"100.000"	"74.7117"	"25350"	"25350"	"25336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.2"	""	"257.6"	""	"189.3"	""	"235.7"	"1.0"	"228.3"	"222.4"	""	"790"	"58"	"35.000"	"28.000"	"5.67018326174693E-05"	"16"	"0"	"1.056E-06"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40369"	"1441.80010"	"1441.80008"	"0.01"	"0.00001"	"14/102"	"14"	"102"	"6055154.25250244"	"HCD"	"MS2"	"0"	"212.3"	"100.000"	"73.9016"	"25052"	"25052"	"25035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"394.5"	""	"379.0"	""	"249.5"	""	"346.0"	""	"335.0"	"301.3"	""	"790"	"55"	"35.000"	"28.000"	"0.000127525517807649"	"16"	"0"	"3.82E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"481.27158"	"1441.80017"	"1441.80008"	"0.07"	"0.00003"	"13/102"	"13"	"102"	"3922658.10778809"	"HCD"	"MS2"	"1.317743"	"21.1"	"100.000"	"74.7747"	"25406"	"25406"	"25389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	""	"31.3"	""	"33.3"	""	"25.8"	""	"34.7"	"40.7"	""	"790"	"47"	"35.000"	"28.000"	"0.000823373898823428"	"18"	"0"	"9.077E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"721.40375"	"1441.80022"	"1441.80008"	"0.10"	"0.00007"	"14/102"	"14"	"102"	"2761339.13983154"	"HCD"	"MS2"	"12.50538"	"117.0"	"100.000"	"75.5919"	"25708"	"25708"	"25693"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"210.8"	""	"192.4"	""	"147.5"	""	"179.3"	"0.6"	"190.3"	"184.5"	""	"790"	"52"	"35.000"	"28.000"	"0.000251534230758626"	"17"	"0"	"8.21E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"721.40375"	"1441.80022"	"1441.80008"	"0.10"	"0.00007"	"14/102"	"14"	"102"	"2879148.86688232"	"HCD"	"MS2"	"0.639757"	"122.8"	"100.000"	"70.5366"	"23656"	"23656"	"23638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.2"	""	"199.3"	""	"149.0"	""	"201.9"	""	"206.7"	"200.1"	""	"790"	"52"	"35.000"	"28.000"	"0.000256801227685521"	"18"	"0"	"3.015E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"721.40375"	"1441.80022"	"1441.80008"	"0.10"	"0.00007"	"15/102"	"15"	"102"	"7266335.65454102"	"HCD"	"MS2"	"0"	"233.9"	"100.000"	"73.2933"	"24804"	"24804"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"405.6"	""	"420.3"	""	"280.1"	""	"378.1"	"0.1"	"389.4"	"337.3"	""	"790"	"58"	"35.000"	"28.000"	"5.67018326174693E-05"	"18"	"0"	"1.33E-06"	"1.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"481.27161"	"1441.80027"	"1441.80008"	"0.13"	"0.00006"	"11/102"	"11"	"102"	"5685209.80554199"	"HCD"	"MS2"	"1.735734"	"40.0"	"100.000"	"71.4810"	"24040"	"24040"	"24021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.2"	""	"62.8"	""	"49.0"	""	"62.7"	"0.3"	"66.4"	"72.7"	""	"790"	"53"	"35.000"	"28.000"	"0.00017889454406193"	"21"	"0"	"1.419E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40381"	"1441.80034"	"1441.80008"	"0.18"	"0.00013"	"15/102"	"15"	"102"	"5407429.24450684"	"HCD"	"MS2"	"0"	"183.6"	"100.000"	"74.1237"	"25112"	"25112"	"25097"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.0"	""	"313.6"	""	"223.9"	""	"298.8"	"1.9"	"301.6"	"270.1"	""	"790"	"60"	"35.000"	"28.000"	"3.57764377354789E-05"	"16"	"0"	"2.616E-06"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"721.40381"	"1441.80034"	"1441.80008"	"0.18"	"0.00013"	"10/102"	"10"	"102"	"4138463.89367676"	"HCD"	"MS2"	"26.8499"	"165.1"	"100.000"	"75.3442"	"25637"	"25637"	"25623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.7"	""	"239.2"	""	"200.3"	""	"285.6"	""	"286.0"	"279.5"	""	"790"	"46"	"35.000"	"28.000"	"0.000992195140446283"	"18"	"0"	"2.517E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40381"	"1441.80034"	"1441.80008"	"0.18"	"0.00013"	"13/102"	"13"	"102"	"7245525.30651855"	"HCD"	"MS2"	"0"	"244.4"	"100.000"	"73.2252"	"24747"	"24747"	"24730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"452.3"	""	"398.5"	""	"314.2"	""	"396.9"	""	"398.8"	"352.1"	""	"790"	"45"	"35.000"	"28.000"	"0.00112615221566404"	"15"	"0"	"4.697E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"481.27167"	"1441.80045"	"1441.80008"	"0.26"	"0.00012"	"13/102"	"13"	"102"	"2800832.16540527"	"HCD"	"MS2"	"9.625923"	"19.9"	"100.000"	"75.4122"	"25634"	"25634"	"25615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"25.4"	""	"20.0"	""	"30.2"	"1.0"	"39.6"	"38.7"	""	"790"	"53"	"35.000"	"28.000"	"0.000218070588515899"	"24"	"0"	"1.48E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"481.27167"	"1441.80045"	"1441.80008"	"0.26"	"0.00012"	"13/102"	"13"	"102"	"6700146.15997314"	"HCD"	"MS2"	"3.169393"	"30.9"	"100.000"	"73.3428"	"24795"	"24795"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"50.6"	""	"39.3"	""	"49.1"	""	"53.0"	"52.5"	""	"790"	"48"	"35.000"	"28.000"	"0.000602000837749929"	"21"	"0"	"6.619E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40387"	"1441.80046"	"1441.80008"	"0.27"	"0.00019"	"14/102"	"14"	"102"	"4941704.25500488"	"HCD"	"MS2"	"0"	"162.9"	"100.000"	"74.4890"	"25291"	"25291"	"25277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"286.4"	""	"275.3"	""	"207.9"	""	"269.1"	""	"254.4"	"246.2"	""	"790"	"51"	"35.000"	"28.000"	"0.00033775135158945"	"16"	"0"	"2.681E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"721.40387"	"1441.80046"	"1441.80008"	"0.27"	"0.00019"	"14/102"	"14"	"102"	"4044535.50305176"	"HCD"	"MS2"	"0.5832331"	"149.0"	"100.000"	"74.9904"	"25462"	"25462"	"25446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.9"	""	"258.8"	""	"183.2"	""	"245.6"	""	"254.0"	"226.6"	""	"790"	"54"	"35.000"	"28.000"	"0.000143746439270247"	"19"	"0"	"1.075E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"721.40387"	"1441.80046"	"1441.80008"	"0.27"	"0.00019"	"9/102"	"9"	"102"	"6680824.69793701"	"HCD"	"MS2"	"0"	"230.0"	"100.000"	"71.9988"	"24252"	"24252"	"24238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"428.4"	""	"392.7"	""	"270.6"	""	"356.0"	""	"377.5"	"348.6"	""	"790"	"54"	"35.000"	"28.000"	"0.00015156436196945"	"18"	"0"	"8.375E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"481.27170"	"1441.80054"	"1441.80008"	"0.32"	"0.00015"	"12/102"	"12"	"102"	"1940760.00317383"	"HCD"	"MS2"	"13.49827"	"24.0"	"100.000"	"70.3009"	"23594"	"23594"	"23576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.8"	""	"33.9"	""	"29.2"	""	"39.6"	""	"51.0"	"41.6"	""	"790"	"43"	"35.000"	"28.000"	"0.001948036525622"	"17"	"0"	"1.667E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"721.40393"	"1441.80058"	"1441.80008"	"0.35"	"0.00025"	"9/102"	"9"	"102"	"388578.288818359"	"HCD"	"MS2"	"21.6167"	"25.1"	"100.000"	"78.1742"	"26751"	"26751"	"26726"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"31.9"	""	"26.4"	""	"47.1"	""	"50.6"	"44.3"	""	"789"	"33"	"35.000"	"28.000"	"0.0221843652787593"	"16"	"9.9E-05"	"0.0004854"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"721.40393"	"1441.80058"	"1441.80008"	"0.35"	"0.00025"	"14/102"	"14"	"102"	"7020149.20928955"	"HCD"	"MS2"	"0.1966381"	"247.4"	"100.000"	"72.9913"	"24681"	"24681"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"455.9"	""	"419.9"	""	"308.7"	""	"387.0"	"0.9"	"402.9"	"361.9"	""	"789"	"50"	"35.000"	"28.000"	"0.000361448983353129"	"18"	"0"	"1.111E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8793"	"0.0000"	"1"	"1"	"1"	"481.27173"	"1441.80063"	"1441.80008"	"0.38"	"0.00018"	"7/102"	"7"	"102"	"7046159.35827637"	"HCD"	"MS2"	"2.319298"	"34.1"	"100.000"	"72.3878"	"24435"	"24435"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.3"	""	"48.6"	""	"45.0"	""	"54.8"	""	"66.2"	"55.6"	""	"789"	"58"	"35.000"	"28.000"	"6.47212665527218E-05"	"23"	"0"	"1.385E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"721.40399"	"1441.80071"	"1441.80008"	"0.43"	"0.00031"	"6/102"	"6"	"102"	"280699.574768066"	"HCD"	"MS2"	"33.06141"	"21.9"	"100.000"	"78.2341"	"26802"	"26802"	"26781"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"29.6"	""	"31.4"	""	"37.7"	""	"42.3"	"36.9"	""	"787"	"9"	"35.000"	"28.000"	"4.45599542933192"	"21"	"0.006925"	"0.08692"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"481.27176"	"1441.80072"	"1441.80008"	"0.45"	"0.00021"	"7/102"	"7"	"102"	"7331143.31060791"	"HCD"	"MS2"	"3.197047"	"34.8"	"100.000"	"72.6844"	"24555"	"24555"	"24536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.1"	""	"58.0"	""	"50.7"	""	"50.6"	"1.0"	"58.6"	"55.2"	""	"784"	"53"	"35.000"	"28.000"	"0.000197372238644859"	"21"	"0"	"1.448E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"721.40405"	"1441.80083"	"1441.80008"	"0.52"	"0.00037"	"14/102"	"14"	"102"	"4442255.68493652"	"HCD"	"MS2"	"0"	"155.5"	"100.000"	"74.7703"	"25405"	"25405"	"25389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.7"	""	"255.4"	""	"190.5"	""	"241.8"	"0.6"	"253.0"	"235.5"	""	"779"	"52"	"35.000"	"28.000"	"0.000223618362029754"	"18"	"0"	"1.037E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"721.40405"	"1441.80083"	"1441.80008"	"0.52"	"0.00037"	"14/102"	"14"	"102"	"3896935.65692139"	"HCD"	"MS2"	"0"	"142.7"	"100.000"	"75.0516"	"25519"	"25519"	"25502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"253.4"	""	"246.9"	""	"180.8"	""	"218.9"	""	"237.0"	"213.5"	""	"779"	"52"	"35.000"	"28.000"	"0.000231476795780765"	"18"	"0"	"1.018E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"481.27182"	"1441.80091"	"1441.80008"	"0.57"	"0.00028"	"11/102"	"11"	"102"	"1748188.36706543"	"HCD"	"MS2"	"35.82865"	"38.5"	"100.000"	"69.9742"	"23428"	"23428"	"23400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.4"	""	"44.3"	""	"46.8"	""	"60.1"	"1.0"	"84.3"	"76.5"	""	"780"	"40"	"35.000"	"28.000"	"0.00429600330721152"	"15"	"0"	"6.758E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"481.27182"	"1441.80091"	"1441.80008"	"0.57"	"0.00028"	"12/102"	"12"	"102"	"3146532.28210449"	"HCD"	"MS2"	"1.119955"	"25.8"	"100.000"	"70.5735"	"23671"	"23671"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.4"	""	"36.4"	""	"37.0"	""	"37.1"	"0.7"	"57.2"	"40.7"	""	"780"	"56"	"35.000"	"28.000"	"9.44201328227109E-05"	"20"	"0"	"2.682E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"721.40424"	"1441.80120"	"1441.80008"	"0.77"	"0.00056"	"14/102"	"14"	"102"	"7120828.20153809"	"HCD"	"MS2"	"0"	"234.6"	"100.000"	"72.3855"	"24434"	"24434"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"410.2"	""	"420.3"	""	"293.0"	""	"382.2"	""	"385.5"	"328.4"	""	"780"	"55"	"35.000"	"28.000"	"0.000123898088755341"	"17"	"0"	"1.83E-06"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.40448"	"1441.80168"	"1441.80008"	"1.11"	"0.00080"	"9/102"	"9"	"102"	"7177309.33282471"	"HCD"	"MS2"	"0"	"241.1"	"100.000"	"72.6777"	"24553"	"24553"	"24536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"446.1"	""	"411.0"	""	"294.4"	""	"387.1"	""	"376.9"	"362.7"	""	"785"	"59"	"35.000"	"28.000"	"5.09142863861203E-05"	"16"	"0"	"3.365E-06"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"721.41248"	"1441.81767"	"1441.82121"	"-2.45"	"-0.00177"	"13/106"	"13"	"106"	"1124008.87628174"	"HCD"	"MS2"	"16.57464"	"47.9"	"100.000"	"85.6484"	"29805"	"29805"	"29789"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.0"	""	"65.5"	""	"74.7"	""	"71.8"	"0.8"	"81.4"	"81.5"	""	"737"	"46"	"35.000"	"28.000"	"0.000910830347438444"	"19"	"0"	"4.506E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"721.41339"	"1441.81951"	"1441.80008"	"13.47"	"0.00971"	"9/102"	"9"	"102"	"900694.942321777"	"HCD"	"MS2"	"37.18374"	"47.6"	"100.000"	"77.4818"	"26470"	"26470"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.6"	""	"62.7"	""	"60.1"	""	"81.2"	""	"89.0"	"75.5"	""	"735"	"38"	"35.000"	"28.000"	"0.00543572332651817"	"28"	"9.9E-05"	"0.0005352"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"721.41400"	"1441.82073"	"1441.82121"	"-0.34"	"-0.00024"	"13/106"	"13"	"106"	"681707.383117676"	"HCD"	"MS2"	"13.08559"	"33.7"	"100.000"	"90.8091"	"31845"	"31845"	"31831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.9"	""	"41.4"	""	"49.2"	""	"56.8"	""	"55.8"	"69.1"	""	"731"	"45"	"35.000"	"28.000"	"0.00107371094779194"	"19"	"0"	"1.389E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNPVTGEVPPR"	"[R].fNPVTGEVPPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"721.41412"	"1441.82097"	"1441.80008"	"14.49"	"0.01045"	"12/102"	"12"	"102"	"878475.603637695"	"HCD"	"MS2"	"36.31224"	"46.9"	"100.000"	"77.5190"	"26513"	"26513"	"26497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.1"	""	"66.2"	""	"53.6"	""	"85.2"	""	"90.8"	"76.8"	""	"731"	"28"	"35.000"	"28.000"	"0.052346467718448"	"26"	"0.0001991"	"0.002574"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"721.41443"	"1441.82158"	"1441.82121"	"0.26"	"0.00019"	"14/106"	"14"	"106"	"1351242.83294678"	"HCD"	"MS2"	"14.06954"	"58.3"	"100.000"	"85.6190"	"29765"	"29765"	"29746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.9"	""	"86.9"	""	"88.8"	""	"89.6"	""	"106.9"	"91.5"	""	"706"	"52"	"35.000"	"28.000"	"0.000205956121808632"	"22"	"0"	"2.771E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"721.41449"	"1441.82170"	"1441.82121"	"0.34"	"0.00025"	"13/106"	"13"	"106"	"600364.320617676"	"HCD"	"MS2"	"6.494124"	"30.4"	"100.000"	"90.6027"	"31800"	"31800"	"31788"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.6"	""	"36.8"	""	"46.9"	""	"49.6"	""	"59.0"	"50.6"	""	"706"	"45"	"35.000"	"28.000"	"0.00111885731445435"	"17"	"0"	"3.137E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"721.41455"	"1441.82182"	"1441.82121"	"0.43"	"0.00031"	"13/106"	"13"	"106"	"287113.946350098"	"HCD"	"MS2"	"29.89931"	"16.1"	"100.000"	"90.9004"	"31920"	"31920"	"31900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.4"	""	"19.8"	""	"23.5"	""	"26.6"	""	"30.0"	"30.0"	""	"706"	"33"	"35.000"	"28.000"	"0.0195782876674142"	"15"	"0"	"0.000186"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"721.41467"	"1441.82207"	"1441.82121"	"0.60"	"0.00043"	"6/106"	"6"	"106"	"247301.951843262"	"HCD"	"MS2"	"11.10446"	"16.4"	"100.000"	"90.5274"	"31732"	"31732"	"31716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"24.5"	""	"21.0"	""	"28.4"	""	"27.3"	"29.7"	""	"706"	"33"	"35.000"	"28.000"	"0.0173689956095552"	"18"	"0.0004582"	"0.006464"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITVNDLPVGR"	"[R].qITVNDLPVGR.[S]"	"N-Term(TMT6plex); Q1(Deamidated)"	"1"	"1"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"P35704"	"Peroxiredoxin-2 OS=Rattus norvegicus OX=10116 GN=Prdx2 PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"721.41492"	"1441.82256"	"1441.82121"	"0.93"	"0.00067"	"6/106"	"6"	"106"	"186669.286621094"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"90.3074"	"31682"	"31682"	"31660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.4"	""	"17.7"	""	"24.2"	""	"19.6"	""	"19.8"	"24.9"	""	"712"	"17"	"35.000"	"28.000"	"0.721855048149577"	"18"	"0.001488"	"0.0123"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPEAASPQK"	"[K].rPEAASPQk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"481.28873"	"1441.85163"	"1441.85273"	"-0.77"	"-0.00037"	"7/86"	"7"	"86"	"2364246.92468262"	"HCD"	"MS2"	"31.85143"	"167.7"	"100.000"	"23.6156"	"4708"	"4708"	"4692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.9"	""	"183.8"	""	"174.5"	""	"369.1"	"1.5"	"347.1"	"314.8"	""	"575"	"17"	"34.000"	"27.000"	"0.58699965909249"	"16"	"0.0001991"	"0.005217"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"721.85144"	"1442.69560"	"1442.69607"	"-0.32"	"-0.00023"	"8/96"	"8"	"96"	"809979.729248047"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"51.4902"	"15924"	"15924"	"15901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.3"	""	"45.4"	""	"52.2"	""	"91.5"	""	"101.1"	"93.7"	""	"470"	"59"	"33.000"	"26.000"	"3.01347686924165E-05"	"22"	"0"	"9.546E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"721.85156"	"1442.69585"	"1442.69607"	"-0.15"	"-0.00011"	"8/96"	"8"	"96"	"811794.197692871"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"51.4982"	"15960"	"15960"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.2"	""	"39.3"	""	"55.0"	""	"86.2"	"0.4"	"88.7"	"85.0"	""	"470"	"55"	"33.000"	"26.000"	"7.56951165951606E-05"	"21"	"0"	"1.271E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"721.85156"	"1442.69585"	"1442.69607"	"-0.15"	"-0.00011"	"8/96"	"8"	"96"	"1025087.01245117"	"HCD"	"MS2"	"0"	"55.8"	"100.000"	"51.7726"	"16037"	"16037"	"16022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.3"	""	"54.5"	""	"56.4"	""	"104.5"	"2.9"	"118.9"	"112.3"	""	"470"	"57"	"33.000"	"26.000"	"4.78704888260844E-05"	"22"	"0"	"4.833E-06"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DITSDTSGDFR"	"[K].dITSDTSGDFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"721.85309"	"1442.69890"	"1442.69607"	"1.96"	"0.00142"	"7/96"	"7"	"96"	"664911.604614258"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"51.1735"	"15832"	"15832"	"15814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.8"	""	"52.9"	""	"47.7"	""	"86.8"	""	"71.4"	"73.2"	""	"490"	"24"	"33.000"	"26.000"	"0.104031793166847"	"18"	"9.9E-05"	"0.0007646"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAmDNASk.[N]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"721.87225"	"1442.73723"	"1442.73836"	"-0.78"	"-0.00056"	"11/82"	"11"	"82"	"268137.758605957"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"32.3390"	"8195"	"8195"	"8174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.4"	""	"36.3"	""	"38.1"	""	"35.6"	""	"39.8"	"50.8"	""	"617"	"32"	"34.000"	"27.000"	"0.0203823928710343"	"15"	"0.002559"	"0.02613"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAmDNASk.[N]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"721.87262"	"1442.73796"	"1442.73836"	"-0.27"	"-0.00020"	"7/82"	"7"	"82"	"319988.921325684"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"32.4789"	"8215"	"8215"	"8192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"35.1"	""	"43.4"	""	"27.4"	""	"50.0"	"55.4"	""	"627"	"40"	"34.000"	"27.000"	"0.0030991139517495"	"15"	"0.001217"	"0.009491"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAMDNASk.[N]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"721.87286"	"1442.73845"	"1442.73836"	"0.07"	"0.00005"	"8/82"	"8"	"82"	"461482.792785645"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"32.1716"	"8090"	"8090"	"8071"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"61.2"	""	"63.1"	""	"43.0"	"0.1"	"70.9"	"68.3"	""	"632"	"53"	"34.000"	"28.000"	"0.000166604636209612"	"16"	"0.0003938"	"0.006236"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTAMDNASK"	"[R].mTAMDNASk.[N]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"721.87305"	"1442.73882"	"1442.73836"	"0.32"	"0.00023"	"8/82"	"8"	"82"	"313897.224914551"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"32.0084"	"8062"	"8062"	"8044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"39.8"	""	"41.6"	""	"28.1"	"0.1"	"46.0"	"53.3"	""	"629"	"40"	"34.000"	"27.000"	"0.00289481390316373"	"15"	"0.002373"	"0.02258"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].DSPSVWAAVPGk.[T]"	"K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"721.89557"	"1442.78386"	"1442.78410"	"-0.16"	"-0.00012"	"6/94"	"6"	"94"	"338600.53314209"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"94.3708"	"33320"	"33320"	"33294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"21.1"	""	"23.2"	""	"24.1"	""	"27.5"	"31.6"	""	"773"	"44"	"35.000"	"28.000"	"0.00140977400486747"	"25"	"0.0001686"	"0.001355"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPSVWAAVPGK"	"[K].DSPSVWAAVPGk.[T]"	"K12(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"721.89563"	"1442.78398"	"1442.78410"	"-0.08"	"-0.00006"	"6/94"	"6"	"94"	"360122.597106934"	"HCD"	"MS2"	"16.43598"	"14.9"	"100.000"	"94.4059"	"33299"	"33299"	"33271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"20.7"	""	"28.1"	""	"19.7"	""	"25.7"	"23.9"	""	"772"	"36"	"35.000"	"28.000"	"0.00962913564599981"	"18"	"0.0001991"	"0.003069"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1;L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"721.89783"	"1442.78838"	"1442.78913"	"-0.52"	"-0.00038"	"16/82"	"16"	"82"	"1852861.63635254"	"HCD"	"MS2"	"0"	"161.9"	"100.000"	"43.1553"	"12575"	"12575"	"12555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"311.9"	""	"233.0"	""	"240.5"	""	"211.8"	"1.8"	"256.7"	"274.4"	""	"775"	"63"	"35.000"	"28.000"	"1.98733786296654E-05"	"20"	"0"	"3.947E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1;L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"721.89807"	"1442.78887"	"1442.78913"	"-0.18"	"-0.00013"	"16/82"	"16"	"82"	"1922745.60852051"	"HCD"	"MS2"	"0"	"160.1"	"100.000"	"43.3273"	"12611"	"12611"	"12594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.9"	""	"232.6"	""	"245.7"	""	"213.0"	""	"241.5"	"272.6"	""	"748"	"61"	"35.000"	"28.000"	"3.22753976864847E-05"	"19"	"0"	"0.0001567"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1;L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"721.89813"	"1442.78899"	"1442.78913"	"-0.10"	"-0.00007"	"8/82"	"8"	"82"	"1452100.01605225"	"HCD"	"MS2"	"0"	"128.3"	"100.000"	"43.0214"	"12487"	"12487"	"12457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"270.0"	""	"196.3"	""	"194.9"	""	"175.2"	"0.8"	"182.4"	"190.0"	""	"743"	"59"	"35.000"	"28.000"	"4.405130899441E-05"	"20"	"0"	"9.927E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTANSk.[LI]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1;L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"721.89838"	"1442.78948"	"1442.78913"	"0.24"	"0.00017"	"8/82"	"8"	"82"	"1714663.58532715"	"HCD"	"MS2"	"0"	"150.8"	"100.000"	"42.8558"	"12453"	"12453"	"12427"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"331.5"	""	"217.5"	""	"215.9"	""	"219.7"	""	"212.6"	"226.2"	""	"742"	"57"	"35.000"	"28.000"	"7.26731373870722E-05"	"24"	"0"	"0.0001819"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"721.89868"	"1442.79009"	"1442.79315"	"-2.12"	"-0.00153"	"7/62"	"7"	"62"	"1240501.07312012"	"HCD"	"MS2"	"35.51664"	"111.9"	"100.000"	"110.1380"	"39576"	"39576"	"39553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.3"	""	"172.7"	""	"153.9"	""	"177.6"	"0.7"	"181.0"	"178.7"	""	"743"	"42"	"35.000"	"28.000"	"0.00239860546086375"	"25"	"9.9E-05"	"0.0004953"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAEDPYK"	"[R].vYAEDPYk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"721.89874"	"1442.79021"	"1442.79315"	"-2.04"	"-0.00147"	"7/58"	"7"	"58"	"1183558.3927002"	"HCD"	"MS2"	"41.205"	"82.7"	"100.000"	"62.5094"	"20398"	"20398"	"20379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.4"	""	"105.7"	""	"125.3"	""	"124.8"	""	"158.5"	"142.4"	""	"746"	"20"	"35.000"	"28.000"	"0.373"	"20"	"0.0001991"	"0.003377"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAEDPYK"	"[R].vYAEDPYk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"721.89923"	"1442.79119"	"1442.79315"	"-1.36"	"-0.00098"	"7/58"	"7"	"58"	"522422.13092041"	"HCD"	"MS2"	"37.54768"	"38.7"	"100.000"	"62.8088"	"20520"	"20520"	"20499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"56.3"	""	"50.0"	""	"50.0"	""	"85.7"	"71.5"	""	"734"	"20"	"35.000"	"28.000"	"0.360301495088334"	"16"	"0.001103"	"0.009032"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYAEDPYK"	"[R].vYAEDPYk.[S]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"P14882"	"Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"721.89923"	"1442.79119"	"1442.79315"	"-1.36"	"-0.00098"	"7/58"	"7"	"58"	"1281725.75799561"	"HCD"	"MS2"	"36.06257"	"85.4"	"100.000"	"62.5032"	"20429"	"20429"	"20408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.3"	""	"113.0"	""	"113.6"	""	"126.4"	""	"152.6"	"181.5"	""	"734"	"18"	"35.000"	"28.000"	"0.550384334629371"	"21"	"0.001049"	"0.008752"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"721.89960"	"1442.79192"	"1442.79315"	"-0.86"	"-0.00062"	"7/62"	"7"	"62"	"518336.375793457"	"HCD"	"MS2"	"42.27244"	"48.3"	"100.000"	"109.9273"	"39479"	"39479"	"39459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.1"	""	"68.7"	""	"70.0"	""	"78.5"	""	"88.0"	"77.5"	""	"761"	"41"	"35.000"	"28.000"	"0.00324604593383693"	"24"	"0"	"0.0001821"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"481.60239"	"1442.79261"	"1442.79315"	"-0.38"	"-0.00018"	"6/62"	"6"	"62"	"945152.24395752"	"HCD"	"MS2"	"23.76906"	"39.7"	"100.000"	"110.2120"	"39606"	"39606"	"39585"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.9"	""	"53.9"	""	"53.7"	""	"63.7"	""	"77.1"	"65.7"	""	"775"	"34"	"35.000"	"28.000"	"0.0138443224783872"	"25"	"0.0001991"	"0.002375"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"481.60245"	"1442.79279"	"1442.79315"	"-0.25"	"-0.00012"	"6/62"	"6"	"62"	"1001125.45465088"	"HCD"	"MS2"	"22.2756"	"38.1"	"100.000"	"110.0414"	"39523"	"39523"	"39509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"51.9"	""	"56.4"	""	"59.5"	"1.7"	"64.2"	"61.8"	""	"765"	"36"	"35.000"	"28.000"	"0.00930318033470734"	"24"	"0.0001686"	"0.001494"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"721.90015"	"1442.79302"	"1442.79315"	"-0.09"	"-0.00007"	"12/62"	"12"	"62"	"518274.984191895"	"HCD"	"MS2"	"6.425753"	"49.8"	"100.000"	"110.4250"	"39693"	"39693"	"39676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.0"	""	"69.5"	""	"70.4"	""	"76.4"	""	"88.4"	"85.5"	""	"766"	"34"	"35.000"	"28.000"	"0.0154596185506593"	"22"	"9.9E-05"	"0.0006033"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEFEGLFK"	"[R].dEFEGLFk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"721.90027"	"1442.79326"	"1442.79315"	"0.07"	"0.00005"	"7/62"	"7"	"62"	"1044309.86096191"	"HCD"	"MS2"	"0"	"101.5"	"100.000"	"110.2101"	"39592"	"39592"	"39577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.8"	""	"132.4"	""	"161.5"	""	"153.0"	"1.7"	"172.5"	"169.9"	""	"766"	"43"	"35.000"	"28.000"	"0.00193730845547193"	"24"	"9.9E-05"	"0.0005972"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANVPQTVPMR"	"[K].tANVPQTVPMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2EJA0"	"Transcriptional coactivator YAP1 OS=Rattus norvegicus OX=10116 GN=Yap1 PE=1 SV=1"	"Q2EJA0"	"Transcriptional coactivator YAP1 OS=Rattus norvegicus OX=10116 GN=Yap1 PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"721.90210"	"1442.79692"	"1442.79870"	"-1.23"	"-0.00089"	"7/108"	"7"	"108"	"231726.560791016"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"50.7336"	"15619"	"15619"	"15590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"21.1"	""	"18.5"	""	"31.7"	""	"47.3"	"47.9"	""	"765"	"21"	"35.000"	"28.000"	"0.274556316411296"	"15"	"0.004998"	"0.06346"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPQIPETK"	"[K].aTPQIPETk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.93469"	"1442.86211"	"1442.86190"	"0.14"	"0.00010"	"4/86"	"4"	"86"	"263272.608825684"	"HCD"	"MS2"	"100"	"25.9"	"100.000"	"55.4173"	"17524"	"17524"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"32.9"	""	"33.4"	""	"39.6"	""	"48.2"	"54.9"	""	"634"	"14"	"35.000"	"28.000"	"1.15627001175418"	"13"	"0.007178"	"0.09176"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMPGFSTSK"	"[K].dmPGFSTSk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"722.38055"	"1443.75383"	"1443.75539"	"-1.08"	"-0.00078"	"8/78"	"8"	"78"	"330383.964172363"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"45.9069"	"13662"	"13662"	"13637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"31.1"	""	"38.4"	""	"60.9"	""	"51.6"	"56.3"	""	"703"	"40"	"35.000"	"28.000"	"0.00392577431594867"	"26"	"0.001453"	"0.01163"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYSVTANSK"	"[K].dYSVTAnSk.[LI]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"2"	"2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1;L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P04642; P42123"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1; L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"722.38092"	"1443.75456"	"1443.77315"	"-12.87"	"-0.00929"	"8/82"	"8"	"82"	"707641.213867188"	"HCD"	"MS2"	"0"	"69.7"	"100.000"	"46.6977"	"13977"	"13977"	"13962"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.7"	""	"87.2"	""	"94.6"	""	"110.0"	"0.2"	"135.9"	"116.9"	""	"716"	"49"	"35.000"	"28.000"	"0.000421582938520449"	"23"	"0"	"0.0001624"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMPGFSTSK"	"[K].dmPGFSTSk.[K]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.5652"	"0.0000"	"1"	"1"	"1"	"722.38171"	"1443.75615"	"1443.75539"	"0.53"	"0.00038"	"7/78"	"7"	"78"	"391792.939208984"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"45.6066"	"13574"	"13574"	"13544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"34.8"	""	"42.1"	""	"74.6"	""	"61.1"	"53.7"	""	"725"	"23"	"35.000"	"28.000"	"0.182939720366779"	"24"	"0.004314"	"0.05063"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMSTDGLMK"	"[K].smSTDGLMk.[F]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"722.38239"	"1443.75749"	"1443.75876"	"-0.88"	"-0.00063"	"8/72"	"8"	"72"	"1221326.230896"	"HCD"	"MS2"	"0"	"93.0"	"100.000"	"47.3564"	"14281"	"14281"	"14263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.4"	""	"156.7"	""	"182.7"	""	"84.8"	"1.4"	"133.4"	"149.5"	""	"707"	"39"	"35.000"	"28.000"	"0.00492480929841165"	"24"	"0.002189"	"0.02147"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMSTDGLMK"	"[K].smSTDGLMk.[F]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"722.38263"	"1443.75798"	"1443.75876"	"-0.54"	"-0.00039"	"8/72"	"8"	"72"	"912692.261230469"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"47.6276"	"14354"	"14354"	"14334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.3"	""	"131.8"	""	"128.4"	""	"83.2"	""	"109.2"	"100.0"	""	"722"	"38"	"35.000"	"28.000"	"0.00520603641900478"	"20"	"0.002525"	"0.02418"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMSTDGLMK"	"[K].smSTDGLMk.[F]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"722.38269"	"1443.75810"	"1443.75876"	"-0.45"	"-0.00033"	"8/72"	"8"	"72"	"624777.011047363"	"HCD"	"MS2"	"0"	"51.1"	"100.000"	"47.6483"	"14400"	"14400"	"14379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.5"	""	"85.0"	""	"106.7"	""	"48.5"	""	"70.6"	"84.4"	""	"721"	"40"	"35.000"	"28.000"	"0.00346661226357311"	"23"	"0.002166"	"0.02003"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMSTDGLMK"	"[K].smSTDGLMk.[F]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"722.38306"	"1443.75884"	"1443.75876"	"0.05"	"0.00004"	"8/72"	"8"	"72"	"1005459.08428955"	"HCD"	"MS2"	"0"	"79.6"	"100.000"	"47.9130"	"14470"	"14470"	"14453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.0"	""	"122.1"	""	"153.9"	""	"73.4"	"0.0"	"127.7"	"120.8"	""	"720"	"40"	"35.000"	"28.000"	"0.00351805399544092"	"15"	"0.001348"	"0.01068"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGSTSSSSSGK"	"[R].tGSTSSSSSGk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"722.38690"	"1443.76653"	"1443.76912"	"-1.80"	"-0.00130"	"9/96"	"9"	"96"	"277693.273254395"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"20.4776"	"3502"	"3502"	"3486"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.6"	""	"32.5"	""	"25.5"	""	"38.1"	""	"53.1"	"51.0"	""	"733"	"46"	"35.000"	"28.000"	"0.000977403700547122"	"16"	"0"	"0.0001044"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFIEGDYK"	"[R].nFIEGDYk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"722.39673"	"1443.78618"	"1443.78840"	"-1.54"	"-0.00111"	"10/74"	"10"	"74"	"378433.407226563"	"HCD"	"MS2"	"6.032702"	"35.1"	"100.000"	"78.1304"	"26760"	"26760"	"26742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.8"	""	"46.7"	""	"48.3"	""	"57.8"	"2.6"	"66.2"	"59.9"	""	"762"	"25"	"35.000"	"28.000"	"0.118556392443739"	"19"	"0.002628"	"0.0279"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFIEGDYK"	"[R].nFIEGDYk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"722.39685"	"1443.78642"	"1443.78840"	"-1.37"	"-0.00099"	"7/74"	"7"	"74"	"1014650.32342529"	"HCD"	"MS2"	"0"	"97.5"	"100.000"	"77.8060"	"26601"	"26601"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.0"	""	"138.8"	""	"152.0"	""	"141.9"	"1.6"	"178.5"	"160.5"	""	"749"	"40"	"35.000"	"28.000"	"0.0035846917969992"	"23"	"9.9E-05"	"0.0007043"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEHFINLR"	"[R].aQSEHFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"0.4655"	"0.0000"	"1"	"1"	"1"	"481.93454"	"1443.78907"	"1443.79058"	"-1.05"	"-0.00050"	"9/90"	"9"	"90"	"3271681.19970703"	"HCD"	"MS2"	"11.57143"	"91.0"	"100.000"	"46.6207"	"13982"	"13982"	"13961"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.1"	""	"115.3"	""	"127.0"	""	"143.2"	"2.5"	"177.2"	"175.5"	""	"760"	"58"	"35.000"	"28.000"	"6.00874254922746E-05"	""	"0"	"1.772E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQSEHFINLR"	"[R].aQSEHFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"481.93475"	"1443.78971"	"1443.79058"	"-0.60"	"-0.00029"	"8/90"	"8"	"90"	"3080411.11669922"	"HCD"	"MS2"	"24.20486"	"86.9"	"100.000"	"46.8927"	"14055"	"14055"	"14044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.2"	""	"116.2"	""	"118.6"	""	"143.7"	"2.1"	"178.3"	"145.0"	""	"759"	"48"	"35.000"	"28.000"	"0.000583729685995001"	""	"0"	"8.693E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPADNQIK"	"[K].sIPADNQIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"722.43182"	"1443.85637"	"1443.85715"	"-0.54"	"-0.00039"	"8/78"	"8"	"78"	"2832819.7456665"	"HCD"	"MS2"	"8.641222"	"184.9"	"100.000"	"52.5538"	"16356"	"16356"	"16339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"305.2"	""	"239.8"	""	"265.8"	""	"282.7"	""	"346.6"	"310.4"	""	"677"	"38"	"35.000"	"28.000"	"0.00494946973553599"	"25"	"0"	"0.0002333"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPADNQIK"	"[K].sIPADNQIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"481.95703"	"1443.85654"	"1443.85715"	"-0.42"	"-0.00020"	"6/78"	"6"	"78"	"3605758.5680542"	"HCD"	"MS2"	"12.08806"	"113.8"	"100.000"	"52.4154"	"16299"	"16299"	"16275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.9"	""	"136.7"	""	"149.3"	""	"181.8"	"0.2"	"243.2"	"194.0"	""	"677"	"39"	"35.000"	"28.000"	"0.00422239319571236"	""	"0.0001686"	"0.001257"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPADNQIK"	"[K].sIPADNQIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"481.95709"	"1443.85672"	"1443.85715"	"-0.30"	"-0.00014"	"6/78"	"6"	"78"	"3462718.72613525"	"HCD"	"MS2"	"11.09311"	"111.5"	"100.000"	"52.0723"	"16193"	"16193"	"16171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"176.1"	""	"152.0"	""	"147.1"	""	"176.8"	"1.4"	"222.6"	"180.0"	""	"664"	"36"	"35.000"	"28.000"	"0.00879302046017425"	""	"9.9E-05"	"0.0005332"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPADNQIK"	"[K].sIPADNQIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"722.43207"	"1443.85686"	"1443.85715"	"-0.20"	"-0.00015"	"8/78"	"8"	"78"	"1072853.70037842"	"HCD"	"MS2"	"11.61323"	"74.9"	"100.000"	"52.2608"	"16236"	"16236"	"16211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.0"	""	"87.7"	""	"88.8"	""	"125.0"	"0.9"	"148.4"	"129.6"	""	"664"	"47"	"35.000"	"28.000"	"0.000677856997630284"	""	"0.0001686"	"0.001597"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPADNQIK"	"[K].sIPADNQIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"722.43207"	"1443.85686"	"1443.85715"	"-0.20"	"-0.00015"	"8/78"	"8"	"78"	"1190402.6418457"	"HCD"	"MS2"	"16.92175"	"79.9"	"100.000"	"51.9270"	"16134"	"16134"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.2"	""	"99.0"	""	"100.4"	""	"142.1"	""	"141.1"	"140.1"	""	"664"	"52"	"35.000"	"28.000"	"0.000199589680844448"	""	"0.0001686"	"0.001704"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIPADNQIK"	"[K].sIPADNQIk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"722.43207"	"1443.85686"	"1443.85715"	"-0.20"	"-0.00015"	"14/78"	"14"	"78"	"2819743.81488037"	"HCD"	"MS2"	"8.298182"	"191.8"	"100.000"	"52.2105"	"16249"	"16249"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"326.0"	""	"243.0"	""	"266.7"	""	"280.3"	"0.5"	"378.2"	"322.2"	""	"664"	"41"	"35.000"	"28.000"	"0.00281279501494678"	""	"0"	"0.0001378"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSNAMEYK"	"[K].qSNAmEYk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"722.87842"	"1444.74956"	"1444.75064"	"-0.75"	"-0.00054"	"6/78"	"6"	"78"	"194816.648376465"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"30.0310"	"7235"	"7235"	"7211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"11.5"	""	"11.5"	""	"30.5"	""	"32.6"	"31.9"	""	"686"	"23"	"35.000"	"28.000"	"0.157142667143085"	"17"	"0.0065"	"0.08098"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSNAMEYK"	"[K].qSNAmEYk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"722.87866"	"1444.75005"	"1444.75064"	"-0.41"	"-0.00029"	"10/78"	"10"	"78"	"263034.027770996"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"29.8097"	"7186"	"7186"	"7164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"18.4"	""	"19.5"	""	"50.6"	""	"39.2"	"40.2"	""	"692"	"20"	"35.000"	"28.000"	"0.350006491173925"	"14"	"0.004751"	"0.05602"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMTEEYK"	"[R].sVMTEEYk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"722.89117"	"1444.77507"	"1444.77579"	"-0.50"	"-0.00036"	"14/66"	"14"	"66"	"830642.637329102"	"HCD"	"MS2"	"0"	"82.0"	"100.000"	"54.7832"	"17265"	"17265"	"17241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.0"	""	"96.5"	""	"87.9"	""	"94.5"	"3.9"	"189.4"	"184.1"	""	"779"	"42"	"35.000"	"28.000"	"0.00268848403595774"	"22"	"9.9E-05"	"0.0009326"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQANDYFK"	"[K].tQANDYFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"722.89496"	"1444.78264"	"1444.78365"	"-0.70"	"-0.00051"	"9/76"	"9"	"76"	"284516.582397461"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"56.3174"	"17919"	"17919"	"17898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"47.9"	""	"42.4"	""	"55.8"	""	"65.1"	"65.1"	""	"816"	"23"	"36.000"	"29.000"	"0.227855839452627"	"25"	"0.007443"	"0.09494"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAFEYGGQK"	"[R].sAFEYGGQk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"722.89514"	"1444.78301"	"1444.78365"	"-0.45"	"-0.00032"	"8/72"	"8"	"72"	"894819.73260498"	"HCD"	"MS2"	"39.57639"	"90.7"	"100.000"	"53.8954"	"16937"	"16937"	"16910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.0"	""	"123.7"	""	"135.8"	""	"146.5"	"2.2"	"146.1"	"155.9"	""	"826"	"39"	"36.000"	"29.000"	"0.00567479335680169"	"20"	"0"	"4.433E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAFEYGGQK"	"[R].sAFEYGGQk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"722.89600"	"1444.78472"	"1444.78365"	"0.74"	"0.00053"	"8/72"	"8"	"72"	"974149.037658691"	"HCD"	"MS2"	"29.95792"	"94.4"	"100.000"	"54.2819"	"17061"	"17061"	"17037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.4"	""	"138.3"	""	"146.3"	""	"141.6"	"1.4"	"144.5"	"157.7"	""	"807"	"38"	"36.000"	"29.000"	"0.00581893544340286"	"20"	"0"	"0.0001376"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQANDYFK"	"[K].tQANDYFk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"P53042"	"Serine/threonine-protein phosphatase 5 OS=Rattus norvegicus OX=10116 GN=Ppp5c PE=1 SV=1"	"0"	"2"	"2"	"0.5172"	"0.0000"	"1"	"1"	"1"	"722.89703"	"1444.78679"	"1444.78365"	"2.17"	"0.00157"	"6/76"	"6"	"76"	"332838.067260742"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"56.6292"	"18044"	"18044"	"18025"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"40.8"	""	"48.3"	""	"55.6"	""	"78.5"	"71.6"	""	"810"	"29"	"36.000"	"29.000"	"0.053021867881476"	"28"	"0.0001991"	"0.002844"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFSPEELK"	"[K].hFSPEELk.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"482.27698"	"1444.81638"	"1444.82004"	"-2.53"	"-0.00122"	"10/62"	"10"	"62"	"2926903.46673584"	"HCD"	"MS2"	"0"	"101.0"	"100.000"	"55.5475"	"17611"	"17611"	"17591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.6"	""	"126.3"	""	"153.3"	""	"128.8"	""	"180.3"	"217.1"	""	"857"	"31"	"36.000"	"29.000"	"0.0362201985151184"	"28"	"0.0001991"	"0.005535"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPHLVTHDAR"	"[K].gIPHLVTHDAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"4"	"4"	"0.9111"	"0.0000"	"1"	"1"	"1"	"361.96024"	"1444.81911"	"1444.82221"	"-2.15"	"-0.00077"	"11/84"	"11"	"84"	"6016208.32653809"	"HCD"	"MS2"	"12.63194"	"88.6"	"100.000"	"33.4622"	"8613"	"8613"	"8588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.2"	""	"116.5"	""	"149.3"	""	"153.7"	""	"168.8"	"144.9"	""	"874"	"45"	"36.000"	"29.000"	"0.00141410428078248"	"19"	"0.0001686"	"0.001075"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIPHLVTHDAR"	"[K].gIPHLVTHDAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"4"	"4"	"0.9167"	"0.0000"	"1"	"1"	"1"	"361.96060"	"1444.82058"	"1444.82221"	"-1.13"	"-0.00041"	"8/84"	"8"	"84"	"6015556.18255615"	"HCD"	"MS2"	"19.64647"	"89.1"	"100.000"	"33.3402"	"8601"	"8601"	"8577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.1"	""	"122.2"	""	"145.9"	""	"151.1"	"1.2"	"156.0"	"155.8"	""	"862"	"48"	"36.000"	"29.000"	"0.000621551716507218"	"20"	"0"	"0.0002807"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQSLLVEER"	"[R].eLQSLLVEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"O08697"	"ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus OX=10116 GN=Arl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"722.91467"	"1444.82207"	"1444.82087"	"0.83"	"0.00060"	"8/102"	"8"	"102"	"261523.369140625"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"97.1326"	"34404"	"34404"	"34377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"15.9"	""	"21.6"	""	"28.2"	"1.5"	"26.7"	"29.7"	""	"868"	"55"	"36.000"	"29.000"	"0.00014841907805095"	"26"	"0"	"1.493E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVINGQEVK"	"[K].vVInGQEVk.[Y]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.4630"	"0.0000"	"1"	"1"	"1"	"722.94226"	"1444.87724"	"1444.87755"	"-0.21"	"-0.00015"	"8/74"	"8"	"74"	"848225.479797363"	"HCD"	"MS2"	"10.10372"	"60.9"	"100.000"	"69.5173"	"23276"	"23276"	"23259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"74.6"	""	"78.0"	""	"114.7"	""	"109.0"	"103.4"	""	"598"	"54"	"34.000"	"27.000"	"0.000120968191617535"	""	"0"	"0.0001559"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVINGQEVK"	"[K].vVInGQEVk.[Y]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"722.94257"	"1444.87786"	"1444.87755"	"0.21"	"0.00015"	"9/74"	"9"	"74"	"924807.701965332"	"HCD"	"MS2"	"17.98112"	"70.0"	"100.000"	"69.2250"	"23157"	"23157"	"23136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.5"	""	"80.6"	""	"79.8"	""	"142.8"	""	"114.4"	"131.3"	""	"599"	"35"	"34.000"	"27.000"	"0.00949285455181526"	""	"0"	"5.633E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVINGQEVK"	"[K].vVInGQEVk.[Y]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"722.94263"	"1444.87798"	"1444.87755"	"0.29"	"0.00021"	"7/74"	"7"	"74"	"1136442.35913086"	"HCD"	"MS2"	"9.235235"	"77.3"	"100.000"	"69.3821"	"23187"	"23187"	"23168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.3"	""	"80.9"	""	"96.8"	""	"157.3"	""	"137.8"	"138.9"	""	"598"	"40"	"34.000"	"27.000"	"0.00335483517836287"	""	"0"	"0.0001249"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVINGQEVK"	"[K].vVInGQEVk.[Y]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"722.94269"	"1444.87810"	"1444.87755"	"0.38"	"0.00027"	"7/74"	"7"	"74"	"804517.40032959"	"HCD"	"MS2"	"52.15155"	"67.4"	"100.000"	"69.0899"	"23068"	"23068"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.1"	""	"79.7"	""	"76.0"	""	"140.8"	""	"111.3"	"127.1"	""	"598"	"36"	"34.000"	"27.000"	"0.00686548445785596"	""	"0"	"6.821E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGEDAGYTK"	"[R].fGEDAGYTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.38678"	"1445.76628"	"1445.76767"	"-0.96"	"-0.00069"	"11/74"	"11"	"74"	"297402.292358398"	"HCD"	"MS2"	"49.03899"	"28.9"	"100.000"	"60.5729"	"19615"	"19615"	"19588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.7"	""	"37.2"	""	"39.5"	""	"54.7"	""	"51.0"	"48.4"	""	"829"	"23"	"36.000"	"29.000"	"0.199307909932412"	"14"	"0.004792"	"0.05668"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGEDAGYTK"	"[R].fGEDAGYTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"723.38702"	"1445.76677"	"1445.76767"	"-0.62"	"-0.00045"	"8/74"	"8"	"74"	"538636.980529785"	"HCD"	"MS2"	"11.62092"	"52.3"	"100.000"	"60.7960"	"19738"	"19738"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.5"	""	"72.1"	""	"85.3"	""	"75.3"	""	"89.5"	"77.8"	""	"827"	"42"	"36.000"	"29.000"	"0.00239042715602264"	"21"	"0"	"0.0001887"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGEDAGYTK"	"[R].fGEDAGYTk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"Q32Q05"	"Ubiquitin thioesterase OTU1 OS=Rattus norvegicus OX=10116 GN=Yod1 PE=2 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"723.38745"	"1445.76763"	"1445.76767"	"-0.03"	"-0.00002"	"8/74"	"8"	"74"	"534762.934020996"	"HCD"	"MS2"	"6.698478"	"56.5"	"100.000"	"60.9021"	"19749"	"19749"	"19725"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"76.5"	""	"89.2"	""	"90.2"	"2.5"	"92.9"	"91.7"	""	"827"	"47"	"36.000"	"29.000"	"0.000795198429904351"	"23"	"0"	"9.262E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSHEFESLVR"	"[K].lSHEFESLVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"482.60266"	"1445.79343"	"1445.79499"	"-1.08"	"-0.00052"	"9/82"	"9"	"82"	"516369.462646484"	"HCD"	"MS2"	"26.3309"	"13.0"	"100.000"	"82.3329"	"28441"	"28441"	"28416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"13.8"	""	"13.7"	""	"20.5"	""	"25.9"	"32.1"	""	"951"	"25"	"36.000"	"29.000"	"0.138404598964067"	"15"	"0.0001686"	"0.001162"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSHEFESLVR"	"[K].lSHEFESLVR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"P14173"	"Aromatic-L-amino-acid decarboxylase OS=Rattus norvegicus OX=10116 GN=Ddc PE=1 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"482.60330"	"1445.79535"	"1445.79499"	"0.25"	"0.00012"	"9/82"	"9"	"82"	"598125.853637695"	"HCD"	"MS2"	"27.08013"	"13.0"	"100.000"	"82.3697"	"28484"	"28484"	"28458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"14.4"	""	"18.2"	""	"20.5"	""	"24.9"	"31.4"	""	"943"	"32"	"36.000"	"29.000"	"0.0310085670313081"	"17"	"9.9E-05"	"0.0005736"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"723.85156"	"1446.69585"	"1446.69634"	"-0.34"	"-0.00025"	"8/104"	"8"	"104"	"2871634.13800049"	"HCD"	"MS2"	"3.400228"	"155.2"	"100.000"	"75.1299"	"25551"	"25551"	"25534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"226.3"	""	"197.4"	""	"214.7"	""	"262.7"	""	"277.1"	"295.2"	""	"386"	"31"	"32.000"	"25.000"	"0.0161643151450488"	"21"	"0"	"5.462E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"723.85168"	"1446.69609"	"1446.69634"	"-0.17"	"-0.00013"	"9/104"	"9"	"104"	"1524960.99798584"	"HCD"	"MS2"	"26.30908"	"93.0"	"100.000"	"74.7210"	"25353"	"25353"	"25336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.1"	""	"128.6"	""	"134.5"	""	"149.8"	"3.3"	"170.1"	"162.6"	""	"386"	"27"	"32.000"	"25.000"	"0.0345586929828812"	"17"	"0"	"8.54E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"723.85181"	"1446.69634"	"1446.69634"	"0.00"	"0.00000"	"9/104"	"9"	"104"	"2916460.5"	"HCD"	"MS2"	"4.903929"	"158.8"	"100.000"	"75.0252"	"25477"	"25477"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.1"	""	"195.5"	""	"212.1"	""	"277.3"	"0.5"	"284.9"	"294.9"	""	"386"	"26"	"32.000"	"25.000"	"0.0501830795690898"	"17"	"0"	"0.0001286"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.85193"	"1446.69658"	"1446.69634"	"0.16"	"0.00012"	"6/104"	"6"	"104"	"464263.344604492"	"HCD"	"MS2"	"11.06232"	"39.3"	"100.000"	"75.4687"	"25688"	"25688"	"25665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.3"	""	"49.7"	""	"45.8"	""	"67.1"	"0.8"	"74.2"	"81.1"	""	"386"	"13"	"32.000"	"25.000"	"0.983008581140388"	"13"	"0.003904"	"0.04231"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.85199"	"1446.69670"	"1446.69634"	"0.25"	"0.00018"	"6/104"	"6"	"104"	"544010.551818848"	"HCD"	"MS2"	"7.768019"	"42.8"	"100.000"	"75.3361"	"25603"	"25603"	"25585"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"56.4"	""	"55.7"	""	"72.8"	""	"83.7"	"87.0"	""	"388"	"15"	"32.000"	"25.000"	"0.671122392982676"	"13"	"0.0007633"	"0.007308"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSWGEPWGER"	"[R].nSWGEPWGER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"723.85211"	"1446.69695"	"1446.69634"	"0.42"	"0.00030"	"8/104"	"8"	"104"	"1817662.62384033"	"HCD"	"MS2"	"22.5131"	"105.2"	"100.000"	"74.8349"	"25431"	"25431"	"25415"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.4"	""	"137.2"	""	"148.5"	""	"170.9"	"2.5"	"181.2"	"190.4"	""	"397"	"17"	"32.000"	"25.000"	"0.424385474766193"	"16"	"9.9E-05"	"0.0009782"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"482.91464"	"1446.72937"	"1446.73107"	"-1.17"	"-0.00056"	"7/80"	"7"	"80"	"3460788.55291748"	"HCD"	"MS2"	"5.804039"	"17.1"	"100.000"	"63.2659"	"20738"	"20738"	"20718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.1"	""	"20.3"	""	"24.8"	""	"26.2"	""	"32.2"	"33.8"	"NoQuanLabels"	"621"	"28"	"34.000"	"27.000"	"0.0487597650745568"	"16"	"0"	"0.0003646"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"482.91470"	"1446.72956"	"1446.73107"	"-1.04"	"-0.00050"	"5/80"	"5"	"80"	"2080427.94824219"	"HCD"	"MS2"	"8.204902"	"26.5"	"100.000"	"63.5650"	"20860"	"20860"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	""	"40.8"	""	"34.2"	""	"38.1"	""	"49.7"	"55.5"	"NoQuanLabels"	"617"	"28"	"34.000"	"27.000"	"0.0519104947840239"	"15"	"9.9E-05"	"0.0004812"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"482.91470"	"1446.72956"	"1446.73107"	"-1.04"	"-0.00050"	"5/80"	"5"	"80"	"3123313.48529053"	"HCD"	"MS2"	"15.1207"	"17.0"	"100.000"	"63.2581"	"20703"	"20703"	"20684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"21.3"	""	"22.2"	""	"28.5"	""	"34.9"	"36.7"	"NoQuanLabels"	"617"	"30"	"34.000"	"27.000"	"0.0295975094822665"	"16"	"0"	"0.0003938"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDIAIHHPWIR"	"[-].mDIAIHHPWIR.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"482.91473"	"1446.72965"	"1446.73107"	"-0.98"	"-0.00047"	"5/80"	"5"	"80"	"2653239.97747803"	"HCD"	"MS2"	"8.529246"	"27.0"	"100.000"	"63.5549"	"20824"	"20824"	"20805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.7"	""	"36.4"	""	"39.4"	""	"42.0"	""	"49.6"	"55.7"	"NoQuanLabels"	"617"	"28"	"34.000"	"27.000"	"0.0532420989678978"	"15"	"9.9E-05"	"0.0004734"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADFSEEYK"	"[R].aDFSEEYk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"P13233"	"2',3'-cyclic-nucleotide 3'-phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Cnp PE=1 SV=2"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"723.88049"	"1446.75371"	"1446.75168"	"1.40"	"0.00101"	"11/64"	"11"	"64"	"446810.41986084"	"HCD"	"MS2"	"6.97482"	"45.1"	"100.000"	"63.4361"	"20808"	"20808"	"20782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.1"	""	"44.9"	""	"53.0"	""	"76.3"	""	"98.1"	"84.9"	""	"859"	"17"	"36.000"	"29.000"	"0.776181287121693"	"24"	"0.0001991"	"0.005808"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"482.92633"	"1446.76444"	"1446.76694"	"-1.73"	"-0.00083"	"7/50"	"7"	"50"	"417422.001831055"	"HCD"	"MS2"	"54.86585"	"19.4"	"100.000"	"87.5983"	"30555"	"30555"	"30533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.9"	""	"23.2"	""	"24.3"	""	"30.3"	"1.0"	"33.4"	"41.9"	""	"928"	"16"	"36.000"	"29.000"	"1.18445340443482"	"25"	"0.008893"	"0.1141"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"482.92661"	"1446.76526"	"1446.76694"	"-1.16"	"-0.00056"	"6/50"	"6"	"50"	"446426.235229492"	"HCD"	"MS2"	"64.14133"	"19.4"	"100.000"	"87.6365"	"30606"	"30606"	"30577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"22.7"	""	"25.5"	""	"35.0"	""	"32.0"	"40.4"	""	"938"	"11"	"36.000"	"29.000"	"3.3819940773678"	"13"	"0.009411"	"0.1231"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"723.88702"	"1446.76677"	"1446.76694"	"-0.12"	"-0.00008"	"9/50"	"9"	"50"	"945780.844055176"	"HCD"	"MS2"	"2.518031"	"92.6"	"100.000"	"87.4890"	"30546"	"30546"	"30530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.3"	""	"93.6"	""	"105.3"	""	"154.2"	"0.2"	"183.3"	"196.9"	""	"943"	"34"	"36.000"	"29.000"	"0.0199747658492359"	"25"	"0.0007633"	"0.007314"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"723.88708"	"1446.76689"	"1446.76694"	"-0.03"	"-0.00002"	"9/50"	"9"	"50"	"807979.029724121"	"HCD"	"MS2"	"0"	"77.9"	"100.000"	"87.7956"	"30670"	"30670"	"30650"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.0"	""	"91.7"	""	"91.8"	""	"127.9"	"0.3"	"163.6"	"155.2"	""	"943"	"34"	"36.000"	"29.000"	"0.020440037915972"	""	"0.0001991"	"0.005908"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"723.88715"	"1446.76702"	"1446.76694"	"0.05"	"0.00004"	"12/50"	"12"	"50"	"874532.626464844"	"HCD"	"MS2"	"0"	"90.3"	"100.000"	"87.5568"	"30538"	"30538"	"30521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.8"	""	"105.3"	""	"100.9"	""	"144.2"	"0.6"	"195.0"	"180.8"	""	"944"	"32"	"36.000"	"29.000"	"0.0281800655267571"	""	"0.001049"	"0.008764"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWEEYYK"	"[K].aWEEYYk.[K]"	"N-Term(TMT6plex); K7(TMT6plex)"	"2"	"2"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1;Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q32PX7; Q99PF5"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1; Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"723.88733"	"1446.76738"	"1446.76694"	"0.31"	"0.00022"	"9/50"	"9"	"50"	"939753.95513916"	"HCD"	"MS2"	"0"	"92.0"	"100.000"	"87.8357"	"30650"	"30650"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.8"	""	"89.2"	""	"115.1"	""	"156.6"	"0.1"	"180.1"	"204.8"	""	"942"	"34"	"36.000"	"29.000"	"0.0203245485185877"	"24"	"0.0001991"	"0.005835"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPALQEAYVR"	"[R].nGPALQEAYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"723.89764"	"1446.78801"	"1446.79024"	"-1.54"	"-0.00112"	"8/100"	"8"	"100"	"355764.508239746"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"52.0787"	"16162"	"16162"	"16132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.3"	""	"23.5"	""	"29.2"	""	"38.8"	"1.2"	"48.5"	"46.1"	""	"939"	"40"	"36.000"	"29.000"	"0.00464125677941433"	"18"	"9.9E-05"	"0.000846"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGPALQEAYVR"	"[R].nGPALQEAYVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.89783"	"1446.78838"	"1446.79024"	"-1.29"	"-0.00093"	"11/100"	"11"	"100"	"326937.323242188"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"51.7279"	"16053"	"16053"	"16029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"30.9"	""	"30.4"	""	"47.3"	"0.2"	"44.8"	"54.1"	""	"939"	"34"	"36.000"	"29.000"	"0.0187342191659026"	"15"	"0.0001991"	"0.003963"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.9242"	"0.0000"	"1"	"1"	"1"	"723.90802"	"1446.80876"	"1446.81137"	"-1.80"	"-0.00130"	"9/112"	"9"	"112"	"234342.526794434"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"48.4932"	"14743"	"14743"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"25.6"	""	"24.7"	""	"27.6"	""	"38.0"	"33.6"	""	"899"	"66"	"36.000"	"29.000"	"1.22950329247487E-05"	"22"	"0"	"0.0003452"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"723.90845"	"1446.80962"	"1446.81137"	"-1.21"	"-0.00088"	"10/112"	"10"	"112"	"2000005.72235107"	"HCD"	"MS2"	"0"	"96.7"	"100.000"	"48.1908"	"14621"	"14621"	"14605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.0"	""	"134.3"	""	"143.6"	""	"161.8"	""	"173.6"	"183.5"	""	"907"	"78"	"36.000"	"29.000"	"6.70775654034283E-07"	""	"0"	"1.689E-07"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.7975"	"0.0000"	"1"	"1"	"1"	"723.90851"	"1446.80974"	"1446.81137"	"-1.13"	"-0.00082"	"10/112"	"10"	"112"	"1830595.9397583"	"HCD"	"MS2"	"0"	"91.9"	"100.000"	"48.5224"	"14719"	"14719"	"14704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.3"	""	"121.9"	""	"137.4"	""	"149.2"	""	"177.5"	"174.4"	""	"907"	"79"	"36.000"	"29.000"	"6.18838452443077E-07"	""	"0"	"1.336E-07"	"1.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"723.90863"	"1446.80998"	"1446.81137"	"-0.96"	"-0.00069"	"7/112"	"7"	"112"	"207435.683410645"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"48.8349"	"14846"	"14846"	"14819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"23.3"	""	"20.3"	""	"31.0"	""	"28.4"	"34.8"	""	"911"	"35"	"36.000"	"29.000"	"0.0138193743440049"	"22"	"0.0007633"	"0.007534"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADIDQEVK"	"[K].aADIDQEVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"723.91327"	"1446.81926"	"1446.82043"	"-0.81"	"-0.00058"	"16/78"	"16"	"78"	"1018082.421875"	"HCD"	"MS2"	"11.93654"	"93.9"	"100.000"	"52.7585"	"16439"	"16439"	"16416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.7"	""	"100.7"	""	"123.5"	""	"154.5"	""	"180.3"	"177.7"	""	"842"	"57"	"36.000"	"29.000"	"8.41941847115385E-05"	"28"	"0"	"3.22E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADIDQEVK"	"[K].aADIDQEVk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"P97536"	"Cullin-associated NEDD8-dissociated protein 1 OS=Rattus norvegicus OX=10116 GN=Cand1 PE=1 SV=1"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"723.91370"	"1446.82012"	"1446.82043"	"-0.22"	"-0.00016"	"16/78"	"16"	"78"	"1009108.39019775"	"HCD"	"MS2"	"10.92648"	"89.6"	"100.000"	"52.4179"	"16334"	"16334"	"16310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.5"	""	"98.2"	""	"108.8"	""	"145.6"	""	"169.2"	"175.0"	""	"837"	"53"	"36.000"	"29.000"	"0.000210715004777738"	"29"	"0"	"3.646E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVENSSTAIGIR"	"[K].aVENSSTAIGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"723.91449"	"1446.82170"	"1446.81137"	"7.14"	"0.00517"	"11/112"	"11"	"112"	"513018.04119873"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"48.2309"	"14600"	"14600"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.2"	""	"46.2"	""	"41.0"	""	"84.2"	""	"91.4"	"92.7"	""	"840"	"46"	"36.000"	"29.000"	"0.00105499230123402"	""	"0"	"1.862E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEHSFEVK"	"[K].iEHSFEVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"482.94836"	"1446.83054"	"1446.83569"	"-3.56"	"-0.00172"	"5/64"	"5"	"64"	"4080666.02606201"	"HCD"	"MS2"	"49.40615"	"136.2"	"100.000"	"55.6506"	"17652"	"17652"	"17637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.8"	""	"233.9"	""	"190.1"	""	"220.5"	"0.9"	"204.4"	"196.1"	""	"843"	"28"	"36.000"	"29.000"	"0.0666496048552466"	"19"	"0.0001686"	"0.001896"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQDGLSGVK"	"[K].qGQDGLSGVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.8596"	"0.0000"	"1"	"1"	"1"	"723.91913"	"1446.83098"	"1446.83166"	"-0.47"	"-0.00034"	"9/96"	"9"	"96"	"1725529.35925293"	"HCD"	"MS2"	"0"	"145.9"	"100.000"	"43.2379"	"12609"	"12609"	"12587"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.1"	""	"157.9"	""	"185.0"	""	"280.6"	""	"259.2"	"266.9"	""	"847"	"57"	"36.000"	"29.000"	"7.90411799068483E-05"	"25"	"0"	"1.25E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQDGLSGVK"	"[K].qGQDGLSGVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"723.91931"	"1446.83135"	"1446.83166"	"-0.22"	"-0.00016"	"6/96"	"6"	"96"	"217710.322814941"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"43.5664"	"12744"	"12744"	"12714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	""	"26.1"	""	"22.7"	""	"41.3"	""	"45.6"	"43.7"	""	"848"	"29"	"36.000"	"29.000"	"0.0557655328849509"	"17"	"0.002559"	"0.02595"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQDGLSGVK"	"[K].qGQDGLSGVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"723.91986"	"1446.83245"	"1446.83166"	"0.54"	"0.00039"	"8/96"	"8"	"96"	"1438585.33001709"	"HCD"	"MS2"	"0"	"118.6"	"100.000"	"43.5298"	"12694"	"12694"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.7"	""	"142.5"	""	"145.4"	""	"227.8"	""	"198.4"	"225.8"	""	"845"	"58"	"36.000"	"29.000"	"7.2581629357408E-05"	"25"	"0"	"1.157E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEHSFEVK"	"[K].iEHSFEVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"482.94916"	"1446.83292"	"1446.83569"	"-1.91"	"-0.00092"	"10/64"	"10"	"64"	"3195114.92950439"	"HCD"	"MS2"	"0"	"115.1"	"100.000"	"56.0279"	"17770"	"17770"	"17757"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.5"	""	"204.7"	""	"160.3"	""	"179.6"	""	"203.0"	"164.1"	""	"847"	"23"	"36.000"	"29.000"	"0.196269770508318"	"14"	"0.0005161"	"0.006776"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEHSFEVK"	"[K].iEHSFEVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"482.94934"	"1446.83347"	"1446.83569"	"-1.53"	"-0.00074"	"7/64"	"7"	"64"	"4566010.79724121"	"HCD"	"MS2"	"10.69131"	"156.8"	"100.000"	"55.9393"	"17766"	"17766"	"17751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"270.8"	""	"268.0"	""	"184.4"	""	"260.2"	""	"257.4"	"242.3"	""	"838"	"28"	"36.000"	"29.000"	"0.066560108766247"	"20"	"0.0001991"	"0.003488"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEHSFEVK"	"[K].iEHSFEVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"482.94955"	"1446.83411"	"1446.83569"	"-1.09"	"-0.00053"	"5/64"	"5"	"64"	"1506186.96624756"	"HCD"	"MS2"	"36.19203"	"61.4"	"100.000"	"56.2464"	"17890"	"17890"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.9"	""	"96.3"	""	"77.4"	""	"86.9"	"0.1"	"107.2"	"113.2"	""	"828"	"26"	"36.000"	"29.000"	"0.110662465318661"	"25"	"0.001615"	"0.01451"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEHSFEVK"	"[K].iEHSFEVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"482.94962"	"1446.83429"	"1446.83569"	"-0.96"	"-0.00046"	"8/64"	"8"	"64"	"4698384.49871826"	"HCD"	"MS2"	"6.79974"	"152.6"	"100.000"	"56.3143"	"17883"	"17883"	"17870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"248.1"	""	"267.7"	""	"187.2"	""	"233.0"	""	"263.3"	"246.6"	""	"830"	"32"	"36.000"	"29.000"	"0.0244933448271316"	"23"	"9.9E-05"	"0.0008552"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEHSFEVK"	"[K].iEHSFEVk.[E]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"482.95010"	"1446.83576"	"1446.83569"	"0.05"	"0.00002"	"5/64"	"5"	"64"	"1299406.37860107"	"HCD"	"MS2"	"16.3094"	"55.9"	"100.000"	"56.6144"	"18003"	"18003"	"17989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.3"	""	"89.0"	""	"69.7"	""	"88.6"	"0.4"	"95.6"	"102.0"	""	"804"	"23"	"36.000"	"29.000"	"0.183326840212421"	"21"	"0.001049"	"0.00849"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RSDVEAIAK"	"[R].rSDVEAIAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"1"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"482.96051"	"1446.86698"	"1446.86805"	"-0.74"	"-0.00036"	"5/86"	"5"	"86"	"2946775.28070068"	"HCD"	"MS2"	"61.75378"	"152.1"	"100.000"	"38.6338"	"10709"	"10709"	"10686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.9"	""	"164.1"	""	"161.3"	""	"233.6"	""	"355.1"	"350.7"	""	"799"	"17"	"36.000"	"29.000"	"0.840459486686708"	"24"	"9.9E-05"	"0.0006913"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RSDVEAIAK"	"[R].rSDVEAIAk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"Q6AYA6"	"Cytochrome b-245 chaperone 1 OS=Rattus norvegicus OX=10116 GN=Cybc1 PE=1 SV=1"	"1"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"482.96075"	"1446.86771"	"1446.86805"	"-0.23"	"-0.00011"	"5/86"	"5"	"86"	"3042712.60113525"	"HCD"	"MS2"	"36.88159"	"151.4"	"100.000"	"38.5303"	"10703"	"10703"	"10676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.9"	""	"151.4"	""	"167.1"	""	"241.3"	"1.2"	"352.9"	"333.5"	""	"799"	"17"	"36.000"	"29.000"	"0.846285273531778"	"24"	"0.0001686"	"0.001065"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTVQQASK"	"[K].vQTVQQASk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64361"	"Latexin OS=Rattus norvegicus OX=10116 GN=Lxn PE=1 SV=1"	"Q64361"	"Latexin OS=Rattus norvegicus OX=10116 GN=Lxn PE=1 SV=1"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"723.93774"	"1446.86821"	"1446.86805"	"0.11"	"0.00008"	"8/88"	"8"	"88"	"238358.875610352"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"38.0431"	"10468"	"10468"	"10439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"24.2"	""	"27.2"	""	"35.8"	"2.0"	"43.8"	"41.8"	""	"788"	"57"	"35.000"	"28.000"	"8.78003448812499E-05"	"23"	"0"	"4.735E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQTVQQASK"	"[K].vQTVQQASk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64361"	"Latexin OS=Rattus norvegicus OX=10116 GN=Lxn PE=1 SV=1"	"Q64361"	"Latexin OS=Rattus norvegicus OX=10116 GN=Lxn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"723.93872"	"1446.87016"	"1446.86805"	"1.46"	"0.00106"	"7/88"	"7"	"88"	"194006.327453613"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"37.9900"	"10482"	"10482"	"10455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"13.9"	""	"26.1"	""	"29.4"	""	"36.7"	"34.0"	""	"785"	"35"	"35.000"	"28.000"	"0.0136407943366458"	"15"	"0"	"0.0002616"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSEKVTK"	"[K].tPVSEKVTk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"482.96881"	"1446.89188"	"1446.89320"	"-0.91"	"-0.00044"	"9/84"	"9"	"84"	"8263966.74945068"	"HCD"	"MS2"	"45.2835"	"396.1"	"100.000"	"32.4677"	"8210"	"8210"	"8192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"661.4"	""	"602.5"	""	"533.0"	""	"554.1"	""	"675.1"	"723.2"	""	"679"	"27"	"35.000"	"28.000"	"0.0727511359080259"	"22"	"0.004234"	"0.04816"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.24789"	"1447.72913"	"1447.73254"	"-2.36"	"-0.00114"	"9/78"	"9"	"78"	"1982985.56414795"	"HCD"	"MS2"	"39.52256"	"76.1"	"100.000"	"54.0357"	"16994"	"16994"	"16968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.8"	""	"124.2"	""	"108.0"	""	"112.7"	"0.1"	"132.0"	"150.1"	""	"659"	"31"	"35.000"	"28.000"	"0.0290305603656141"	"14"	"0.0001686"	"0.001154"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"724.36896"	"1447.73064"	"1447.73254"	"-1.32"	"-0.00095"	"8/78"	"8"	"78"	"889871.584594727"	"HCD"	"MS2"	"0"	"89.1"	"100.000"	"54.3762"	"17133"	"17133"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.2"	""	"100.1"	""	"100.2"	""	"113.4"	""	"206.2"	"231.8"	""	"714"	"48"	"35.000"	"28.000"	"0.000620394895863527"	"18"	"0.001103"	"0.009173"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"724.36914"	"1447.73100"	"1447.73254"	"-1.06"	"-0.00077"	"8/78"	"8"	"78"	"870817.312133789"	"HCD"	"MS2"	"0"	"84.5"	"100.000"	"54.7396"	"17247"	"17247"	"17231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.1"	""	"107.8"	""	"95.4"	""	"110.3"	""	"197.5"	"210.2"	""	"727"	"46"	"35.000"	"28.000"	"0.000865973127111884"	"19"	"0.00307"	"0.0331"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.36926"	"1447.73125"	"1447.73254"	"-0.89"	"-0.00065"	"8/78"	"8"	"78"	"1346727.21740723"	"HCD"	"MS2"	"7.284232"	"105.9"	"100.000"	"54.0656"	"17006"	"17006"	"16984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.9"	""	"187.8"	""	"163.7"	""	"105.4"	"0.4"	"182.6"	"197.7"	""	"720"	"31"	"35.000"	"28.000"	"0.0278806247208907"	"14"	"0.003001"	"0.03212"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"483.24863"	"1447.73133"	"1447.73254"	"-0.84"	"-0.00041"	"9/78"	"9"	"78"	"1716412.97412109"	"HCD"	"MS2"	"9.165863"	"61.9"	"100.000"	"54.3347"	"17116"	"17116"	"17095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.1"	""	"92.2"	""	"78.5"	""	"83.2"	"0.2"	"116.5"	"134.5"	""	"713"	"34"	"35.000"	"28.000"	"0.0148956525709521"	"18"	"0"	"0.0003218"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.24875"	"1447.73169"	"1447.73254"	"-0.59"	"-0.00028"	"9/78"	"9"	"78"	"1679472.25372314"	"HCD"	"MS2"	"42.0989"	"65.5"	"100.000"	"54.3532"	"17090"	"17090"	"17069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.9"	""	"90.1"	""	"95.2"	""	"97.6"	""	"124.5"	"126.0"	""	"714"	"29"	"35.000"	"28.000"	"0.0449436372010518"	"15"	"0.0001686"	"0.00173"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"483.24881"	"1447.73188"	"1447.73254"	"-0.46"	"-0.00022"	"9/78"	"9"	"78"	"1775764.19537354"	"HCD"	"MS2"	"9.455801"	"61.2"	"100.000"	"54.6752"	"17221"	"17221"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.3"	""	"90.8"	""	"92.2"	""	"75.4"	"2.0"	"107.9"	"126.0"	""	"714"	"26"	"35.000"	"28.000"	"0.0886478518590519"	"14"	"9.9E-05"	"0.0008179"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPECPGPEK"	"[R].sPEcPGPEk.[Q]"	"N-Term(TMT6plex); C4(Methylthio); K9(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.37006"	"1447.73284"	"1447.73254"	"0.20"	"0.00015"	"7/78"	"7"	"78"	"1318799.034729"	"HCD"	"MS2"	"10.52586"	"103.9"	"100.000"	"54.4245"	"17119"	"17119"	"17098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.4"	""	"182.1"	""	"168.8"	""	"101.1"	""	"178.8"	"189.0"	""	"717"	"34"	"35.000"	"28.000"	"0.0127787731333309"	"15"	"0.004819"	"0.05835"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"483.26230"	"1447.77234"	"1447.77426"	"-1.32"	"-0.00064"	"8/102"	"8"	"102"	"738688.21105957"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"71.5617"	"24073"	"24073"	"24052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.5"	""	"26.3"	""	"32.9"	""	"44.2"	""	"42.9"	"42.1"	""	"912"	"42"	"36.000"	"29.000"	"0.00272248090682229"	""	"0"	"0.0001558"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.4186"	"0.0000"	"1"	"1"	"1"	"483.26230"	"1447.77234"	"1447.77426"	"-1.32"	"-0.00064"	"8/102"	"8"	"102"	"1578334.50012207"	"HCD"	"MS2"	"23.6574"	"37.5"	"100.000"	"71.4140"	"24044"	"24044"	"24021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"46.3"	""	"56.9"	""	"66.7"	""	"70.4"	"82.4"	""	"912"	"43"	"36.000"	"29.000"	"0.00222312991487144"	""	"0"	"5.67E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"724.39032"	"1447.77336"	"1447.77426"	"-0.62"	"-0.00045"	"8/102"	"8"	"102"	"669543.619506836"	"HCD"	"MS2"	"3.688286"	"46.3"	"100.000"	"71.7134"	"24135"	"24135"	"24116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.3"	""	"49.8"	""	"55.6"	""	"77.5"	""	"109.0"	"101.9"	""	"924"	"36"	"36.000"	"29.000"	"0.0104385932584209"	""	"9.9E-05"	"0.0007678"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"724.39038"	"1447.77349"	"1447.77426"	"-0.53"	"-0.00039"	"18/102"	"18"	"102"	"3982732.0177002"	"HCD"	"MS2"	"2.597505"	"194.8"	"100.000"	"71.5383"	"24095"	"24095"	"24080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.0"	""	"199.4"	""	"212.9"	""	"334.9"	""	"446.8"	"488.9"	""	"925"	"48"	"36.000"	"29.000"	"0.000729645212235948"	""	"0"	"1.097E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"724.39063"	"1447.77397"	"1447.77426"	"-0.20"	"-0.00014"	"8/102"	"8"	"102"	"1889925.22930908"	"HCD"	"MS2"	"37.27288"	"117.9"	"100.000"	"71.2277"	"23968"	"23968"	"23948"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.9"	""	"128.9"	""	"137.2"	""	"214.5"	"1.6"	"250.0"	"270.3"	""	"943"	"32"	"36.000"	"29.000"	"0.0320982752624099"	"29"	"0"	"1.71E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"483.26285"	"1447.77399"	"1447.77426"	"-0.19"	"-0.00009"	"8/102"	"8"	"102"	"1486315.68438721"	"HCD"	"MS2"	"35.31622"	"43.7"	"100.000"	"71.2577"	"23949"	"23949"	"23934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.5"	""	"60.5"	""	"60.2"	""	"75.3"	""	"82.9"	"92.2"	""	"942"	"33"	"36.000"	"29.000"	"0.0224916287892772"	"28"	"0"	"0.000229"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.3617"	"0.0000"	"1"	"1"	"1"	"724.39069"	"1447.77410"	"1447.77426"	"-0.11"	"-0.00008"	"16/102"	"16"	"102"	"4207473.55908203"	"HCD"	"MS2"	"3.144853"	"206.5"	"100.000"	"71.4004"	"24007"	"24007"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.8"	""	"216.4"	""	"211.7"	""	"371.7"	""	"488.5"	"513.1"	""	"939"	"47"	"36.000"	"29.000"	"0.000926052474605925"	""	"0"	"6.333E-06"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"724.39075"	"1447.77422"	"1447.77426"	"-0.03"	"-0.00002"	"8/102"	"8"	"102"	"527649.202819824"	"HCD"	"MS2"	"6.580393"	"43.1"	"100.000"	"71.8536"	"24223"	"24223"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.7"	""	"60.3"	""	"48.0"	""	"67.9"	""	"93.5"	"92.4"	""	"939"	"34"	"36.000"	"29.000"	"0.0168902312855621"	""	"9.9E-05"	"0.0007289"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPQFGSEVELR"	"[R].gPQFGSEVELR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.5161"	"0.0000"	"1"	"1"	"1"	"724.39075"	"1447.77422"	"1447.77426"	"-0.03"	"-0.00002"	"8/102"	"8"	"102"	"1985840.19683838"	"HCD"	"MS2"	"33.60117"	"138.0"	"100.000"	"71.1172"	"23892"	"23892"	"23870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.6"	""	"150.1"	""	"146.1"	""	"259.3"	""	"317.8"	"301.5"	""	"939"	"31"	"36.000"	"29.000"	"0.0333146762058811"	"29"	"0"	"6.695E-06"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAASTDYYK"	"[R].aAASTDYYk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"724.39398"	"1447.78069"	"1447.78332"	"-1.82"	"-0.00131"	"8/68"	"8"	"68"	"1261006.34893799"	"HCD"	"MS2"	"100"	"125.0"	"100.000"	"44.8632"	"13237"	"13237"	"13210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.2"	""	"153.7"	""	"152.3"	""	"195.0"	""	"253.2"	"258.7"	""	"927"	"28"	"36.000"	"29.000"	"0.0683989978173378"	"23"	"0"	"0.0002682"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAASTDYYK"	"[R].aAASTDYYk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"724.39484"	"1447.78240"	"1447.78332"	"-0.64"	"-0.00046"	"16/68"	"16"	"68"	"1899901.96453857"	"HCD"	"MS2"	"0"	"166.4"	"100.000"	"44.9074"	"13288"	"13288"	"13267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.3"	""	"203.9"	""	"236.1"	""	"236.5"	""	"302.3"	"370.1"	""	"928"	"57"	"36.000"	"29.000"	"9.27935907509591E-05"	"22"	"0"	"2.918E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAASTDYYK"	"[R].aAASTDYYk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"724.39490"	"1447.78252"	"1447.78332"	"-0.55"	"-0.00040"	"16/68"	"16"	"68"	"1248222.04754639"	"HCD"	"MS2"	"0"	"124.1"	"100.000"	"44.6114"	"13168"	"13168"	"13148"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.0"	""	"141.8"	""	"156.1"	""	"198.9"	""	"229.6"	"247.8"	""	"928"	"57"	"36.000"	"29.000"	"9.73908106001314E-05"	"21"	"0"	"3.782E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAASTDYYK"	"[R].aAASTDYYk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"724.39551"	"1447.78374"	"1447.78332"	"0.29"	"0.00021"	"16/68"	"16"	"68"	"1477384.81329346"	"HCD"	"MS2"	"0"	"146.2"	"100.000"	"45.1799"	"13365"	"13365"	"13346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.2"	""	"150.8"	""	"182.9"	""	"211.2"	""	"302.1"	"325.7"	""	"913"	"57"	"36.000"	"29.000"	"9.10837246783293E-05"	"22"	"0"	"7.687E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEVIEIMTDR"	"[K].iEVIEIMTDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"724.40485"	"1447.80242"	"1447.80278"	"-0.25"	"-0.00018"	"5/86"	"5"	"86"	"193276.838989258"	"HCD"	"MS2"	"8.25512"	"13.2"	"100.000"	"112.4118"	"40488"	"40488"	"40457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"15.5"	""	"12.4"	""	"22.3"	""	"28.0"	"31.1"	""	"949"	"7"	"36.000"	"29.000"	"8.95851895146191"	"19"	"0.008893"	"0.1133"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANLYISGLPR"	"[K].dANLYISGLPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"724.40839"	"1447.80950"	"1447.81064"	"-0.79"	"-0.00057"	"8/108"	"8"	"108"	"283285.660705566"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"95.7869"	"33859"	"33859"	"33839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"16.5"	""	"21.2"	""	"41.9"	"1.0"	"35.7"	"45.8"	""	"959"	"55"	"36.000"	"29.000"	"0.000152331111687657"	"22"	"0"	"9.745E-06"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANLYISGLPR"	"[K].dANLYISGLPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"724.40900"	"1447.81072"	"1447.81064"	"0.05"	"0.00004"	"8/108"	"8"	"108"	"260391.263366699"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"95.8073"	"33900"	"33900"	"33878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.1"	""	"16.5"	""	"22.8"	""	"38.2"	""	"36.8"	"41.1"	""	"976"	"49"	"36.000"	"29.000"	"0.000561590589804884"	"18"	"0"	"3.663E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANLYISGLPR"	"[K].dANLYISGLPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"724.40912"	"1447.81096"	"1447.81064"	"0.22"	"0.00016"	"8/108"	"8"	"108"	"235758.808166504"	"HCD"	"MS2"	"18.46358"	"17.1"	"100.000"	"96.1143"	"34024"	"34024"	"34006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"20.6"	""	"23.0"	""	"28.6"	""	"30.4"	"38.6"	""	"976"	"41"	"36.000"	"29.000"	"0.00360097264303001"	"20"	"0"	"0.000101"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DANLYISGLPR"	"[K].dANLYISGLPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"B5DF91"	"ELAV-like protein 1 OS=Rattus norvegicus OX=10116 GN=Elavl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"724.40930"	"1447.81133"	"1447.81064"	"0.47"	"0.00034"	"7/108"	"7"	"108"	"229313.802978516"	"HCD"	"MS2"	"5.553366"	"17.3"	"100.000"	"96.0824"	"33979"	"33979"	"33961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"11.6"	""	"19.7"	""	"34.5"	""	"34.8"	"40.4"	""	"971"	"43"	"36.000"	"29.000"	"0.0023506568446208"	"21"	"0"	"0.0003126"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVANGDTANK"	"[R].vVAnGDTANk.[I]"	"N-Term(TMT6plex); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"724.40973"	"1447.81218"	"1447.81568"	"-2.42"	"-0.00175"	"9/86"	"9"	"86"	"123796.42956543"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"40.1194"	"11310"	"11310"	"11287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"14.7"	""	"14.7"	""	"16.0"	""	"22.7"	"23.9"	""	"1003"	"22"	"37.000"	"30.000"	"0.291924763712092"	"14"	"0.001615"	"0.01398"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNDSGTPVAK"	"[K].tNDSGTPVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"724.41119"	"1447.81511"	"1447.81568"	"-0.39"	"-0.00028"	"9/98"	"9"	"98"	"711753.987976074"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"33.5472"	"8648"	"8648"	"8620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.3"	""	"68.7"	""	"99.6"	""	"117.2"	""	"108.7"	"119.5"	""	"966"	"54"	"36.000"	"29.000"	"0.000190522876902359"	""	"0"	"7.743E-06"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVANGDTANK"	"[R].vVAnGDTANk.[I]"	"N-Term(TMT6plex); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"724.41150"	"1447.81572"	"1447.81568"	"0.03"	"0.00002"	"7/86"	"7"	"86"	"197429.678771973"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"39.9799"	"11287"	"11287"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"20.2"	""	"23.2"	""	"33.8"	""	"39.4"	"47.3"	""	"961"	"21"	"36.000"	"29.000"	"0.408971827356242"	"14"	"0.0001991"	"0.003796"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNDSGTPVAK"	"[K].tNDSGTPVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"724.41156"	"1447.81584"	"1447.81568"	"0.11"	"0.00008"	"8/98"	"8"	"98"	"611658.442993164"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"33.4136"	"8631"	"8631"	"8607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"65.0"	""	"69.7"	""	"108.2"	"0.3"	"88.2"	"103.4"	""	"961"	"51"	"36.000"	"29.000"	"0.000396911234771834"	""	"0"	"2.462E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVANGDTANK"	"[R].vVAnGDTANk.[I]"	"N-Term(TMT6plex); N4(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"Q5HZE4"	"Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Mri1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.41278"	"1447.81828"	"1447.81568"	"1.80"	"0.00130"	"7/86"	"7"	"86"	"345191.305908203"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"38.7257"	"10747"	"10747"	"10718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.2"	""	"44.5"	""	"45.8"	""	"49.4"	"1.0"	"79.1"	"76.6"	""	"958"	"18"	"36.000"	"29.000"	"0.705237688665273"	"14"	"0.001348"	"0.01147"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPTPVTMEK"	"[K].sPTPVTMEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q569C0"	"Transmembrane protein 100 OS=Rattus norvegicus OX=10116 GN=Tmem100 PE=1 SV=1"	"Q569C0"	"Transmembrane protein 100 OS=Rattus norvegicus OX=10116 GN=Tmem100 PE=1 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"724.41534"	"1447.82341"	"1447.82307"	"0.23"	"0.00017"	"6/78"	"6"	"78"	"465416.929199219"	"HCD"	"MS2"	"25.01236"	"38.8"	"100.000"	"53.0829"	"16606"	"16606"	"16577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.9"	""	"32.5"	""	"30.0"	""	"58.5"	""	"91.7"	"116.5"	""	"1038"	"39"	"37.000"	"30.000"	"0.00653382288721172"	"22"	"0.002834"	"0.03007"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPTPVTMEK"	"[K].sPTPVTMEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q569C0"	"Transmembrane protein 100 OS=Rattus norvegicus OX=10116 GN=Tmem100 PE=1 SV=1"	"Q569C0"	"Transmembrane protein 100 OS=Rattus norvegicus OX=10116 GN=Tmem100 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"724.41553"	"1447.82378"	"1447.82307"	"0.49"	"0.00035"	"8/78"	"8"	"78"	"499709.701843262"	"HCD"	"MS2"	"19.74833"	"40.2"	"100.000"	"53.3821"	"16694"	"16694"	"16666"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"38.0"	""	"43.1"	""	"67.8"	""	"89.4"	"113.8"	""	"1034"	"45"	"37.000"	"30.000"	"0.00159034205322095"	"18"	"0.001316"	"0.01034"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EKVESELR"	"[R].ekVESELR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"483.28833"	"1447.85044"	"1447.85206"	"-1.12"	"-0.00054"	"5/78"	"5"	"78"	"9286412.23809814"	"HCD"	"MS2"	"15.92019"	"448.7"	"100.000"	"35.7042"	"9520"	"9520"	"9504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"733.7"	""	"504.3"	""	"529.0"	""	"785.7"	""	"886.0"	"819.7"	""	"855"	"4"	"36.000"	"29.000"	"17.0583145759816"	"15"	"0.00856"	"0.1091"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TIEDLRDK"	"[K].tIEDLRDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"483.28842"	"1447.85071"	"1447.85206"	"-0.93"	"-0.00045"	"8/72"	"8"	"72"	"38010291.9418945"	"HCD"	"MS2"	"4.184426"	"604.5"	"35.437"	"50.1990"	"15436"	"15436"	"15419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"930.9"	""	"662.3"	""	"826.0"	""	"1013.2"	""	"991.7"	"1309.4"	""	"855"	"13"	"36.000"	"29.000"	"2.3929637463916"	"17"	"0.008135"	"0.1026"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TIEDLRNK"	"[K].tIEDLRnk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"Q6IFU7"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"483.28842"	"1447.85071"	"1447.85206"	"-0.93"	"-0.00045"	"8/66"	"8"	"66"	"38010291.9418945"	"HCD"	"MS2"	"4.184426"	"604.5"	"35.437"	"50.1990"	"15436"	"15436"	"15419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"930.9"	""	"662.3"	""	"826.0"	""	"1013.2"	""	"991.7"	"1309.4"	""	"855"	"13"	"36.000"	"29.000"	"2.3929637463916"	"17"	"0.008135"	"0.1026"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TIEDLRDK"	"[K].tIEDLRDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"483.28860"	"1447.85126"	"1447.85206"	"-0.55"	"-0.00027"	"4/72"	"4"	"72"	"5762435.31591797"	"HCD"	"MS2"	"6.630059"	"269.2"	"100.000"	"49.9063"	"15316"	"15316"	"15292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"446.0"	""	"315.7"	""	"360.0"	""	"468.6"	""	"428.6"	"532.0"	""	"840"	"11"	"36.000"	"29.000"	"3.37480971317959"	"16"	"0.008926"	"0.1159"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TIEDLRNK"	"[K].tIEDLRnk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"Q6IFU7"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"483.28860"	"1447.85126"	"1447.85206"	"-0.56"	"-0.00027"	"4/66"	"4"	"66"	"5762435.31591797"	"HCD"	"MS2"	"6.630059"	"269.2"	"100.000"	"49.9063"	"15316"	"15316"	"15292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"446.0"	""	"315.7"	""	"360.0"	""	"468.6"	""	"428.6"	"532.0"	""	"840"	"11"	"36.000"	"29.000"	"3.37480971317959"	"16"	"0.008926"	"0.1159"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TIEDLRDK"	"[K].tIEDLRDk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"724.42944"	"1447.85161"	"1447.85206"	"-0.31"	"-0.00023"	"5/72"	"5"	"72"	"651501.32232666"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"50.0768"	"15386"	"15386"	"15355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"53.0"	""	"57.1"	""	"71.6"	""	"67.3"	"84.2"	""	"842"	"15"	"36.000"	"29.000"	"1.21697623047586"	"21"	"0.004959"	"0.06299"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"TIEDLRNK"	"[K].tIEDLRnk.[I]"	"N-Term(TMT6plex); N7(Deamidated); K8(TMT6plex)"	"0"	"1"	""	""	"Q6IFU7"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1"	"1"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"724.42944"	"1447.85161"	"1447.85206"	"-0.31"	"-0.00023"	"5/66"	"5"	"66"	"651501.32232666"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"50.0768"	"15386"	"15386"	"15355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"53.0"	""	"57.1"	""	"71.6"	""	"67.3"	"84.2"	""	"842"	"15"	"36.000"	"29.000"	"1.21697623047586"	"21"	"0.004959"	"0.063"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELELTLGK"	"[R].sELELTLGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4474"	"0.0000"	"1"	"1"	"1"	"724.44220"	"1447.87712"	"1447.87722"	"-0.06"	"-0.00005"	"11/74"	"11"	"74"	"335793.351745605"	"HCD"	"MS2"	"51.50823"	"28.1"	"100.000"	"98.6218"	"35036"	"35036"	"35013"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"43.9"	""	"37.9"	""	"40.2"	""	"49.2"	"54.6"	""	"692"	"38"	"35.000"	"28.000"	"0.00561146293686191"	""	"0"	"0.0001444"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELELTLGK"	"[R].sELELTLGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"724.44232"	"1447.87737"	"1447.87722"	"0.10"	"0.00008"	"13/74"	"13"	"74"	"367946.868530273"	"HCD"	"MS2"	"36.9999"	"28.8"	"100.000"	"98.5821"	"34990"	"34990"	"34970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"37.2"	""	"49.0"	""	"38.9"	""	"50.7"	"60.0"	""	"688"	"42"	"35.000"	"28.000"	"0.00194786315429159"	""	"0"	"5.705E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIYDDSSK"	"[R].yIYDDSSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"724.88574"	"1448.76421"	"1448.76733"	"-2.16"	"-0.00156"	"7/62"	"7"	"62"	"677954.365783691"	"HCD"	"MS2"	"44.25447"	"63.6"	"100.000"	"57.2106"	"18245"	"18245"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.9"	""	"64.2"	""	"88.7"	""	"87.2"	""	"132.3"	"154.6"	""	"831"	"17"	"36.000"	"29.000"	"0.850297746559103"	"20"	"0.0001991"	"0.002825"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIYDDSSK"	"[R].yIYDDSSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"724.88611"	"1448.76494"	"1448.76733"	"-1.65"	"-0.00120"	"6/62"	"6"	"62"	"414954.963623047"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"56.5673"	"18019"	"18019"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"58.6"	""	"57.2"	""	"61.0"	"1.0"	"95.8"	"94.5"	""	"821"	"27"	"36.000"	"29.000"	"0.0789429154717619"	"23"	"0.0001991"	"0.004734"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIYDDSSK"	"[R].yIYDDSSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"724.88672"	"1448.76616"	"1448.76733"	"-0.81"	"-0.00059"	"7/62"	"7"	"62"	"704581.901977539"	"HCD"	"MS2"	"33.91882"	"67.7"	"100.000"	"56.8814"	"18146"	"18146"	"18125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.5"	""	"69.7"	""	"82.4"	""	"104.5"	"0.3"	"133.1"	"155.4"	""	"851"	"19"	"36.000"	"29.000"	"0.534440749552169"	"20"	"0.0001686"	"0.001535"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIYDDSSK"	"[R].yIYDDSSk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.88733"	"1448.76738"	"1448.76733"	"0.03"	"0.00002"	"8/62"	"8"	"62"	"441838.172851563"	"HCD"	"MS2"	"26.6031"	"44.5"	"100.000"	"56.9054"	"18121"	"18121"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.9"	""	"47.6"	""	"61.9"	""	"67.8"	""	"85.6"	"91.8"	""	"851"	"21"	"36.000"	"29.000"	"0.328019426086915"	"14"	"0.0001991"	"0.004417"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDIMEPK"	"[R].eLDImEPk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"Q4FZT9"	"26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus OX=10116 GN=Psmd2 PE=1 SV=1"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"724.90674"	"1448.80620"	"1448.80709"	"-0.61"	"-0.00044"	"11/66"	"11"	"66"	"564268.584716797"	"HCD"	"MS2"	"14.22525"	"49.7"	"100.000"	"70.8998"	"23836"	"23836"	"23813"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.1"	""	"53.6"	""	"47.2"	""	"109.0"	"0.3"	"104.4"	"96.7"	""	"1032"	"20"	"37.000"	"30.000"	"0.534133358006541"	"30"	"0.00394"	"0.04322"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQESGNGFVR"	"[R].lLQESGNGFVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"724.90692"	"1448.80657"	"1448.80589"	"0.46"	"0.00034"	"9/98"	"9"	"98"	"446816.447570801"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"79.6309"	"27371"	"27371"	"27350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.6"	""	"44.2"	""	"38.3"	""	"47.4"	""	"75.4"	"67.4"	""	"1031"	"40"	"37.000"	"30.000"	"0.00502607158243313"	"17"	"0"	"2.853E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQESGNGFVR"	"[R].lLQESGNGFVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"724.90704"	"1448.80681"	"1448.80589"	"0.63"	"0.00046"	"9/98"	"9"	"98"	"371097.655639648"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"79.5229"	"27300"	"27300"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.5"	""	"40.6"	""	"38.5"	""	"42.0"	""	"67.7"	"45.0"	""	"1017"	"32"	"37.000"	"30.000"	"0.0353419865493903"	"16"	"0"	"0.0001617"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVLNDVYR"	"[K].dLIVLNDVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"724.91919"	"1448.83110"	"1448.83105"	"0.04"	"0.00003"	"6/92"	"6"	"92"	"110600.778442383"	"HCD"	"MS2"	"13.43929"	"7.5"	"100.000"	"109.7594"	"39424"	"39424"	"39405"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.6"	""	"9.0"	""	"13.5"	""	"15.0"	""	"11.6"	"15.0"	""	"976"	"21"	"36.000"	"29.000"	"0.387632178545449"	"14"	"0.001261"	"0.01018"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVLNDVYR"	"[K].dLIVLNDVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"724.91919"	"1448.83110"	"1448.83105"	"0.04"	"0.00003"	"6/92"	"6"	"92"	"764568.502258301"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"109.4725"	"39313"	"39313"	"39307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"42.3"	""	"50.4"	""	"60.1"	"0.4"	"48.2"	"52.8"	""	"976"	"39"	"36.000"	"29.000"	"0.00579989086989264"	"20"	"0"	"3.143E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"724.91931"	"1448.83135"	"1448.83608"	"-3.27"	"-0.00237"	"8/84"	"8"	"84"	"2056986.230896"	"HCD"	"MS2"	"8.987101"	"173.9"	"100.000"	"50.6784"	"15596"	"15596"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.0"	""	"220.7"	""	"216.9"	""	"285.7"	""	"369.3"	"367.1"	""	"976"	"44"	"36.000"	"29.000"	"0.00203432259133524"	""	"0"	"2.889E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLIVLNDVYR"	"[K].dLIVLNDVYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"724.91937"	"1448.83147"	"1448.83105"	"0.29"	"0.00021"	"9/92"	"9"	"92"	"594514.018066406"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"109.3143"	"39240"	"39240"	"39230"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"40.2"	""	"44.4"	""	"52.1"	""	"47.8"	"49.8"	""	"976"	"37"	"36.000"	"29.000"	"0.00900367524559582"	"19"	"0"	"1.578E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5510"	"0.0000"	"1"	"1"	"1"	"724.91937"	"1448.83147"	"1448.83608"	"-3.18"	"-0.00231"	"8/84"	"8"	"84"	"2094106.83380127"	"HCD"	"MS2"	"0"	"171.3"	"100.000"	"50.3253"	"15487"	"15487"	"15463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.6"	""	"219.3"	""	"205.9"	""	"295.0"	""	"345.5"	"350.9"	""	"976"	"49"	"36.000"	"29.000"	"0.00063302348424017"	""	"0"	"2.09E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.0645"	"0.0000"	"1"	"1"	"1"	"483.61539"	"1448.83161"	"1448.83608"	"-3.09"	"-0.00149"	"8/84"	"8"	"84"	"5190348.69378662"	"HCD"	"MS2"	"35.32145"	"211.6"	"100.000"	"50.9153"	"15693"	"15693"	"15669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.5"	""	"240.5"	""	"273.8"	""	"333.4"	""	"408.9"	"490.2"	""	"976"	"31"	"36.000"	"29.000"	"0.0430942991404258"	"27"	"0"	"0.0001741"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.1818"	"0.0000"	"1"	"1"	"1"	"483.61542"	"1448.83170"	"1448.83608"	"-3.02"	"-0.00146"	"8/84"	"8"	"84"	"5823948.33135986"	"HCD"	"MS2"	"32.59285"	"231.2"	"100.000"	"50.5415"	"15575"	"15575"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"290.1"	""	"267.0"	""	"292.8"	""	"371.7"	""	"455.0"	"524.9"	""	"972"	"33"	"36.000"	"29.000"	"0.0245830785733513"	""	"9.9E-05"	"0.0006091"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEALSALDSK"	"[R].gEALSALDSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"483.61633"	"1448.83445"	"1448.83608"	"-1.13"	"-0.00054"	"9/86"	"9"	"86"	"949713.086120605"	"HCD"	"MS2"	"3.943757"	"40.8"	"100.000"	"74.6917"	"25373"	"25373"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.1"	""	"47.4"	""	"42.7"	""	"77.2"	"0.2"	"82.9"	"83.7"	""	"988"	"30"	"36.000"	"29.000"	"0.0482755187152171"	"21"	"9.9E-05"	"0.0006716"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEALSALDSK"	"[R].gEALSALDSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"724.92114"	"1448.83501"	"1448.83608"	"-0.74"	"-0.00054"	"15/86"	"15"	"86"	"578481.098571777"	"HCD"	"MS2"	"26.20897"	"48.3"	"100.000"	"74.4371"	"25239"	"25239"	"25224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.1"	""	"51.7"	""	"57.0"	""	"86.1"	""	"114.6"	"99.9"	""	"948"	"40"	"36.000"	"29.000"	"0.00435289650733217"	"18"	"0"	"2.701E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEVELQSK"	"[R].sAEVELQSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"724.92126"	"1448.83525"	"1448.83608"	"-0.57"	"-0.00041"	"8/82"	"8"	"82"	"753233.936584473"	"HCD"	"MS2"	"10.15754"	"64.1"	"100.000"	"49.5451"	"15169"	"15169"	"15143"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.8"	""	"90.1"	""	"87.8"	""	"96.8"	"0.4"	"110.3"	"130.1"	""	"948"	"51"	"36.000"	"29.000"	"0.000349766605081194"	"26"	"0"	"1.506E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"724.92133"	"1448.83537"	"1448.83608"	"-0.49"	"-0.00035"	"8/84"	"8"	"84"	"6281651.17169189"	"HCD"	"MS2"	"0"	"250.4"	"100.000"	"50.6290"	"15611"	"15611"	"15594"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"305.8"	""	"289.4"	""	"306.2"	""	"388.5"	""	"513.2"	"578.7"	""	"948"	"51"	"36.000"	"29.000"	"0.000369639472388025"	""	"0"	"3.577E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEALSALDSK"	"[R].gEALSALDSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"483.61676"	"1448.83573"	"1448.83608"	"-0.24"	"-0.00012"	"10/86"	"10"	"86"	"864522.380249023"	"HCD"	"MS2"	"23.16424"	"37.5"	"100.000"	"74.4878"	"25260"	"25260"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.7"	""	"40.9"	""	"44.6"	""	"70.1"	""	"77.5"	"81.0"	""	"939"	"38"	"36.000"	"29.000"	"0.00817778327057362"	"23"	"9.9E-05"	"0.0008399"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEALSALDSK"	"[R].gEALSALDSk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"Q4KM74"	"Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"724.92151"	"1448.83574"	"1448.83608"	"-0.23"	"-0.00017"	"9/86"	"9"	"86"	"730156.728515625"	"HCD"	"MS2"	"23.37077"	"58.0"	"100.000"	"74.6111"	"25340"	"25340"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.7"	""	"67.3"	""	"66.1"	""	"102.8"	""	"130.7"	"116.3"	""	"939"	"52"	"36.000"	"29.000"	"0.000327066148375006"	"23"	"0"	"1.97E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.4894"	"0.0000"	"1"	"1"	"1"	"724.92175"	"1448.83623"	"1448.83608"	"0.10"	"0.00007"	"9/84"	"9"	"84"	"430645.898132324"	"HCD"	"MS2"	"9.118826"	"39.7"	"100.000"	"50.9509"	"15741"	"15741"	"15718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.9"	""	"45.8"	""	"50.3"	""	"66.1"	""	"82.6"	"88.8"	""	"940"	"47"	"36.000"	"29.000"	"0.000867157247014351"	""	"0"	"5.063E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAEVELQSK"	"[R].sAEVELQSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7547"	"0.0000"	"1"	"1"	"1"	"724.92181"	"1448.83635"	"1448.83608"	"0.19"	"0.00014"	"8/82"	"8"	"82"	"704468.558654785"	"HCD"	"MS2"	"0"	"63.9"	"100.000"	"49.8868"	"15273"	"15273"	"15250"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.5"	""	"84.4"	""	"87.7"	""	"100.7"	"1.8"	"113.1"	"125.8"	""	"940"	"53"	"36.000"	"29.000"	"0.000228611386674987"	"28"	"0"	"1.451E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSGTAEVELK"	"[K].gSGTAEVELk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.4902"	"0.0000"	"1"	"1"	"1"	"724.92188"	"1448.83647"	"1448.83608"	"0.27"	"0.00020"	"9/84"	"9"	"84"	"5799777.59155273"	"HCD"	"MS2"	"0"	"230.9"	"100.000"	"50.9752"	"15718"	"15718"	"15701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"281.5"	""	"270.4"	""	"280.5"	""	"359.4"	"0.1"	"476.0"	"526.2"	""	"940"	"51"	"36.000"	"29.000"	"0.000334270351417065"	""	"0"	"5.914E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"483.62091"	"1448.84818"	"1448.85134"	"-2.18"	"-0.00105"	"6/78"	"6"	"78"	"1446764.96972656"	"HCD"	"MS2"	"9.805221"	"49.1"	"100.000"	"77.5713"	"26506"	"26506"	"26487"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"63.7"	""	"73.3"	""	"79.1"	""	"81.1"	"96.4"	""	"924"	"30"	"36.000"	"29.000"	"0.0445289008914274"	"25"	"9.9E-05"	"0.0008083"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"483.62097"	"1448.84836"	"1448.85134"	"-2.05"	"-0.00099"	"6/78"	"6"	"78"	"530017.473449707"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"77.2596"	"26381"	"26381"	"26367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"35.2"	""	"37.8"	""	"38.4"	""	"43.6"	"49.0"	""	"931"	"28"	"36.000"	"29.000"	"0.06885249546923"	"18"	"0.0001686"	"0.001585"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"483.62119"	"1448.84900"	"1448.85134"	"-1.61"	"-0.00078"	"6/78"	"6"	"78"	"998316.601501465"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"77.5488"	"26525"	"26525"	"26508"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.1"	""	"68.2"	""	"53.5"	""	"59.9"	""	"76.0"	"73.2"	""	"920"	"22"	"36.000"	"29.000"	"0.2784568023868"	"23"	"0.0001991"	"0.005206"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"724.92834"	"1448.84941"	"1448.85134"	"-1.33"	"-0.00096"	"13/78"	"13"	"78"	"1069980.14624023"	"HCD"	"MS2"	"11.11099"	"76.1"	"100.000"	"77.6357"	"26532"	"26532"	"26516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.9"	""	"97.9"	""	"114.9"	""	"108.9"	"2.6"	"125.5"	"149.2"	""	"920"	"27"	"36.000"	"29.000"	"0.096329172969141"	"21"	"9.9E-05"	"0.000469"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"483.62158"	"1448.85019"	"1448.85134"	"-0.79"	"-0.00038"	"6/78"	"6"	"78"	"907845.163024902"	"HCD"	"MS2"	"10.68041"	"32.9"	"100.000"	"77.8796"	"26658"	"26658"	"26641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.1"	""	"46.2"	""	"45.7"	""	"54.3"	""	"55.4"	"70.8"	""	"929"	"30"	"36.000"	"29.000"	"0.0476415319743779"	"19"	"9.9E-05"	"0.0008993"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"724.92877"	"1448.85027"	"1448.85134"	"-0.74"	"-0.00053"	"7/78"	"7"	"78"	"1036819.70214844"	"HCD"	"MS2"	"16.14918"	"75.8"	"100.000"	"77.6588"	"26569"	"26569"	"26552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.0"	""	"97.8"	""	"110.7"	""	"113.8"	""	"139.3"	"152.8"	""	"929"	"30"	"36.000"	"29.000"	"0.0419745180544009"	"23"	"0"	"0.0002936"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"724.92926"	"1448.85124"	"1448.85134"	"-0.06"	"-0.00005"	"7/78"	"7"	"78"	"397077.771972656"	"HCD"	"MS2"	"0"	"32.8"	"100.000"	"77.3677"	"26454"	"26454"	"26437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.2"	""	"46.6"	""	"42.1"	""	"58.7"	""	"56.4"	"55.5"	""	"893"	"32"	"36.000"	"29.000"	"0.0259311312423266"	"22"	"9.9E-05"	"0.0007127"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].iNYGGEIPk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"724.92932"	"1448.85137"	"1448.85134"	"0.02"	"0.00001"	"7/78"	"7"	"78"	"550020.071777344"	"HCD"	"MS2"	"0"	"48.0"	"100.000"	"77.3100"	"26401"	"26401"	"26387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.7"	""	"72.1"	"1.9"	"70.1"	""	"67.3"	""	"91.7"	"82.2"	""	"893"	"38"	"36.000"	"29.000"	"0.00770586618773625"	"21"	"9.9E-05"	"0.0007171"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQESGNGFVR"	"[R].lLQESGnGFVR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"725.39917"	"1449.79106"	"1449.78991"	"0.80"	"0.00058"	"6/98"	"6"	"98"	"272805.201049805"	"HCD"	"MS2"	"29.59755"	"20.9"	"100.000"	"86.0335"	"29962"	"29962"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.9"	""	"26.8"	""	"22.9"	""	"30.6"	""	"47.3"	"38.4"	""	"1004"	"28"	"37.000"	"30.000"	"0.0788322127775443"	"18"	"0.0001991"	"0.003836"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNDTNATK"	"[R].lDNDTNATk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"725.40051"	"1449.79375"	"1449.79494"	"-0.82"	"-0.00060"	"7/88"	"7"	"88"	"349090.481445313"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"38.1832"	"10561"	"10561"	"10535"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.0"	""	"41.6"	""	"40.9"	""	"50.6"	""	"51.4"	"57.5"	""	"1014"	"34"	"37.000"	"30.000"	"0.0212328337514784"	"24"	"0.000264"	"0.006156"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNDQVTK"	"[R].dATNDQVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"725.40063"	"1449.79399"	"1449.79494"	"-0.66"	"-0.00048"	"8/88"	"8"	"88"	"482021.281555176"	"HCD"	"MS2"	"0"	"45.5"	"100.000"	"32.1188"	"8069"	"8069"	"8051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.9"	""	"42.1"	""	"57.4"	""	"76.2"	""	"85.6"	"83.6"	""	"1014"	"60"	"37.000"	"30.000"	"4.53949936133644E-05"	"27"	"0"	"1.915E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNDQVTK"	"[R].dATNDQVTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"P41562"	"Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus OX=10116 GN=Idh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"725.40149"	"1449.79570"	"1449.79494"	"0.52"	"0.00038"	"7/88"	"7"	"88"	"371901.759094238"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"31.9743"	"8048"	"8048"	"8032"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"38.7"	""	"47.5"	""	"53.4"	""	"58.6"	"59.8"	""	"1014"	"44"	"37.000"	"30.000"	"0.0018923783000243"	"22"	"0"	"0.0001856"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLQESGNGFVR"	"[R].lLQESGnGFVR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"P10688"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 OS=Rattus norvegicus OX=10116 GN=Plcd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"725.40192"	"1449.79656"	"1449.78991"	"4.58"	"0.00332"	"6/98"	"6"	"98"	"227606.654174805"	"HCD"	"MS2"	"50.63739"	"17.9"	"100.000"	"85.9095"	"29882"	"29882"	"29854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"20.6"	""	"19.6"	""	"24.1"	""	"48.1"	"36.1"	""	"1023"	"25"	"37.000"	"30.000"	"0.167434765430526"	"20"	"0.006613"	"0.08251"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDNDTNATK"	"[R].lDNDTNATk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"725.40222"	"1449.79717"	"1449.79494"	"1.53"	"0.00111"	"7/88"	"7"	"88"	"360868.187316895"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"38.3074"	"10576"	"10576"	"10550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.3"	""	"47.0"	""	"48.5"	""	"54.2"	"0.6"	"58.4"	"60.7"	""	"998"	"38"	"36.000"	"29.000"	"0.00853297642230052"	"22"	"0.0001991"	"0.004542"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"483.93756"	"1449.79813"	"1449.79897"	"-0.58"	"-0.00028"	"9/68"	"9"	"68"	"812265.101623535"	"HCD"	"MS2"	"24.94188"	"32.1"	"100.000"	"89.6003"	"31359"	"31359"	"31341"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"36.2"	""	"44.9"	""	"53.8"	""	"63.9"	"62.5"	""	"1036"	"22"	"37.000"	"30.000"	"0.344611494912502"	""	"0.002462"	"0.02309"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"725.40277"	"1449.79827"	"1449.79897"	"-0.48"	"-0.00035"	"7/68"	"7"	"68"	"1496284.69573975"	"HCD"	"MS2"	"0"	"128.9"	"100.000"	"89.5911"	"31355"	"31355"	"31341"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.2"	""	"152.1"	""	"147.0"	""	"223.9"	"0.5"	"220.0"	"271.4"	""	"1038"	"40"	"37.000"	"30.000"	"0.00509527182427372"	"30"	"0.0001686"	"0.001342"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.3214"	"0.0000"	"1"	"1"	"1"	"725.40283"	"1449.79839"	"1449.79897"	"-0.40"	"-0.00029"	"12/68"	"12"	"68"	"331346.492248535"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"90.4606"	"31705"	"31705"	"31692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.9"	""	"37.0"	""	"41.0"	""	"50.0"	""	"68.9"	"65.5"	""	"1038"	"28"	"37.000"	"30.000"	"0.0792806784225559"	""	"0.0001991"	"0.002443"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"483.93774"	"1449.79868"	"1449.79897"	"-0.20"	"-0.00010"	"6/68"	"6"	"68"	"3736974.94897461"	"HCD"	"MS2"	"8.370901"	"134.3"	"100.000"	"89.8510"	"31499"	"31499"	"31483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.2"	""	"148.0"	""	"174.8"	""	"238.3"	""	"250.8"	"260.6"	""	"1018"	"30"	"37.000"	"30.000"	"0.0556823790432496"	"30"	"0.0001991"	"0.002386"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"725.40302"	"1449.79875"	"1449.79897"	"-0.15"	"-0.00011"	"7/68"	"7"	"68"	"3458871.49511719"	"HCD"	"MS2"	"0.5047386"	"287.9"	"100.000"	"90.0471"	"31578"	"31578"	"31563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.4"	""	"314.7"	""	"359.0"	""	"472.8"	""	"543.8"	"603.2"	""	"1016"	"41"	"37.000"	"30.000"	"0.00418662162426605"	""	"0.0001991"	"0.002699"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.3448"	"0.0000"	"1"	"1"	"1"	"483.93784"	"1449.79895"	"1449.79897"	"-0.01"	"0.00000"	"6/68"	"6"	"68"	"1177473.35552979"	"HCD"	"MS2"	"21.72163"	"46.2"	"100.000"	"89.5487"	"31378"	"31378"	"31362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.8"	""	"54.2"	""	"58.9"	""	"76.5"	""	"92.8"	"91.3"	""	"1015"	"29"	"37.000"	"30.000"	"0.0615794841610976"	""	"0.0001991"	"0.005325"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGEPLGHVPAR"	"[R].sTGEPLGHVPAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"483.93784"	"1449.79895"	"1449.80114"	"-1.51"	"-0.00073"	"14/94"	"14"	"94"	"3238436.73394775"	"HCD"	"MS2"	"11.69057"	"101.7"	"100.000"	"31.4301"	"7829"	"7829"	"7808"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.4"	""	"126.6"	""	"130.7"	""	"193.3"	""	"203.4"	"194.6"	""	"1015"	"29"	"37.000"	"30.000"	"0.0687758626768151"	"16"	"0"	"1.12E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"725.40314"	"1449.79900"	"1449.79897"	"0.02"	"0.00002"	"7/68"	"7"	"68"	"1016392.50073242"	"HCD"	"MS2"	"2.811024"	"91.2"	"100.000"	"89.4562"	"31341"	"31341"	"31324"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.5"	""	"107.2"	""	"102.4"	""	"156.6"	""	"159.3"	"199.2"	""	"1015"	"40"	"37.000"	"30.000"	"0.00531417738135832"	""	"9.9E-05"	"0.0007926"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"725.40314"	"1449.79900"	"1449.79897"	"0.02"	"0.00002"	"7/68"	"7"	"68"	"2659868.29724121"	"HCD"	"MS2"	"0"	"218.5"	"100.000"	"90.1865"	"31596"	"31596"	"31582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"322.2"	""	"231.5"	""	"264.3"	""	"363.8"	"4.3"	"427.2"	"460.0"	""	"1015"	"41"	"37.000"	"30.000"	"0.00436954329233685"	""	"0.0001686"	"0.001503"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"483.93790"	"1449.79914"	"1449.79897"	"0.12"	"0.00006"	"6/68"	"6"	"68"	"3422753.76617432"	"HCD"	"MS2"	"7.781863"	"122.6"	"100.000"	"89.8983"	"31478"	"31478"	"31459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.1"	""	"135.0"	""	"157.9"	""	"225.4"	"0.3"	"222.4"	"240.9"	""	"1015"	"26"	"37.000"	"30.000"	"0.127478236399111"	"27"	"0.0001991"	"0.00325"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGEPLGHVPAR"	"[R].sTGEPLGHVPAR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"483.93799"	"1449.79941"	"1449.80114"	"-1.19"	"-0.00058"	"12/94"	"12"	"94"	"4048555.45831299"	"HCD"	"MS2"	"23.61157"	"105.4"	"100.000"	"31.5534"	"7841"	"7841"	"7818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.0"	""	"137.9"	""	"134.6"	""	"192.6"	""	"199.6"	"199.6"	""	"1015"	"56"	"37.000"	"30.000"	"0.000139455628269947"	"23"	"0"	"2.87E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5641"	"0.0000"	"1"	"1"	"1"	"725.40350"	"1449.79973"	"1449.79897"	"0.53"	"0.00038"	"7/68"	"7"	"68"	"7746771.19537354"	"HCD"	"MS2"	"0"	"581.3"	"100.000"	"89.8916"	"31476"	"31476"	"31459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"933.2"	""	"631.7"	""	"726.7"	""	"1005.1"	""	"1057.0"	"1158.2"	""	"1016"	"39"	"37.000"	"30.000"	"0.00581920574254333"	""	"0.0001991"	"0.004733"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"725.40356"	"1449.79985"	"1449.79897"	"0.61"	"0.00044"	"7/68"	"7"	"68"	"7459658.79504395"	"HCD"	"MS2"	"0"	"580.2"	"100.000"	"89.7543"	"31461"	"31461"	"31446"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"934.4"	""	"647.3"	""	"737.7"	""	"993.3"	"0.9"	"1068.7"	"1115.5"	""	"1012"	"38"	"37.000"	"30.000"	"0.00807514848501787"	""	"0.0001991"	"0.005195"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTWEALEK"	"[R].dTWEALEk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"725.40369"	"1449.80010"	"1449.79897"	"0.78"	"0.00057"	"7/68"	"7"	"68"	"395623.920898438"	"HCD"	"MS2"	"7.547855"	"38.2"	"100.000"	"90.3281"	"31690"	"31690"	"31676"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.6"	""	"41.1"	""	"40.7"	""	"66.1"	""	"76.9"	"77.4"	""	"1010"	"28"	"37.000"	"30.000"	"0.0798530259831543"	""	"0.0001686"	"0.001395"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFASPGQQK"	"[R].eFASPGQQk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"725.40845"	"1449.80962"	"1449.81020"	"-0.40"	"-0.00029"	"7/74"	"7"	"74"	"694159.256225586"	"HCD"	"MS2"	"0"	"60.0"	"100.000"	"43.0767"	"12509"	"12509"	"12489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.9"	""	"79.9"	""	"77.3"	""	"83.7"	""	"114.7"	"114.3"	""	"1035"	"42"	"37.000"	"30.000"	"0.003265204257685"	"24"	"0.0001991"	"0.002111"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFASPGQQK"	"[R].eFASPGQQk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"725.40863"	"1449.80998"	"1449.81020"	"-0.15"	"-0.00011"	"14/74"	"14"	"74"	"525664.497314453"	"HCD"	"MS2"	"21.29405"	"47.3"	"100.000"	"42.8627"	"12456"	"12456"	"12427"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.4"	""	"62.6"	""	"63.6"	""	"72.1"	"2.5"	"79.0"	"92.8"	""	"1047"	"34"	"37.000"	"30.000"	"0.0228516038177727"	"20"	"0.0001991"	"0.002625"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"483.94183"	"1449.81095"	"1449.81238"	"-0.99"	"-0.00048"	"9/98"	"9"	"98"	"16003268.8186035"	"HCD"	"MS2"	"12.32056"	"190.5"	"100.000"	"24.6974"	"5112"	"5112"	"5096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"250.3"	""	"251.9"	""	"270.9"	""	"338.8"	""	"337.7"	"357.7"	""	"1047"	"60"	"37.000"	"30.000"	"5.59650229273061E-05"	"26"	"0"	"3.292E-06"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"725.40918"	"1449.81108"	"1449.81238"	"-0.89"	"-0.00065"	"9/98"	"9"	"98"	"768406.006713867"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"24.7135"	"5119"	"5119"	"5096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.9"	""	"57.5"	""	"56.1"	""	"64.0"	""	"63.0"	"65.9"	""	"1019"	"44"	"37.000"	"30.000"	"0.00189733574336703"	"20"	"0"	"0.0002984"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8904"	"0.0000"	"1"	"1"	"1"	"483.94211"	"1449.81177"	"1449.81238"	"-0.42"	"-0.00020"	"9/98"	"9"	"98"	"20075520.8498535"	"HCD"	"MS2"	"5.066574"	"227.0"	"100.000"	"24.5938"	"5107"	"5107"	"5093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"307.7"	""	"296.9"	""	"316.9"	""	"391.5"	"0.1"	"430.9"	"407.3"	""	"1019"	"73"	"37.000"	"30.000"	"2.48395765707675E-06"	"25"	"0"	"3.309E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].amEAVAAQGk.[AV]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"725.40955"	"1449.81182"	"1449.81357"	"-1.21"	"-0.00088"	"10/76"	"10"	"76"	"138041.704589844"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"34.5020"	"9072"	"9072"	"9044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"10.9"	""	"10.8"	""	"24.9"	""	"20.7"	"20.5"	""	"1019"	"27"	"37.000"	"30.000"	"0.113538770855322"	"18"	"0.005266"	"0.06636"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNQTPGQVALR"	"[K].hNQTPGQVALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"725.41022"	"1449.81316"	"1449.81238"	"0.54"	"0.00039"	"10/98"	"10"	"98"	"859369.373779297"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"24.5823"	"5103"	"5103"	"5080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.7"	""	"59.9"	""	"58.1"	""	"57.8"	"0.2"	"71.2"	"72.6"	""	"996"	"49"	"36.000"	"29.000"	"0.000641548276743182"	"23"	"0"	"0.0003745"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEAVAAQGK"	"[K].amEAVAAQGk.[AV]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"2"	"2"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2;Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P16290; P25113"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2; Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"725.41028"	"1449.81328"	"1449.81357"	"-0.20"	"-0.00015"	"10/76"	"10"	"76"	"172364.389770508"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"34.5570"	"9058"	"9058"	"9031"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"14.5"	""	"12.7"	""	"19.8"	""	"27.8"	"31.0"	""	"998"	"29"	"36.000"	"29.000"	"0.0638411270774604"	"15"	"0.003568"	"0.03931"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPENDLK"	"[K].yLPENDLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"725.42065"	"1449.83403"	"1449.83535"	"-0.91"	"-0.00066"	"6/66"	"6"	"66"	"607191.563293457"	"HCD"	"MS2"	"45.44237"	"46.4"	"100.000"	"78.1903"	"26784"	"26784"	"26765"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.7"	""	"52.7"	""	"58.4"	""	"81.5"	""	"95.1"	"97.7"	""	"950"	"25"	"36.000"	"29.000"	"0.145443263100307"	"25"	"0.00511"	"0.0655"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].inYGGEIPk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"725.42102"	"1449.83476"	"1449.83535"	"-0.41"	"-0.00029"	"12/78"	"12"	"78"	"392904.831420898"	"HCD"	"MS2"	"23.58551"	"30.0"	"100.000"	"84.8115"	"29467"	"29467"	"29449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.2"	""	"37.7"	""	"41.7"	""	"47.0"	"0.6"	"59.9"	"58.5"	""	"934"	"25"	"36.000"	"29.000"	"0.14870202426461"	"21"	"0.003208"	"0.03459"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INYGGEIPK"	"[K].inYGGEIPk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"725.42120"	"1449.83513"	"1449.83535"	"-0.15"	"-0.00011"	"7/78"	"7"	"78"	"408709.307678223"	"HCD"	"MS2"	"23.01373"	"29.2"	"100.000"	"84.8057"	"29435"	"29435"	"29427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.0"	""	"38.6"	""	"44.0"	""	"44.0"	""	"54.9"	"59.5"	""	"910"	"40"	"36.000"	"29.000"	"0.00469906439621436"	"20"	"9.9E-05"	"0.0004077"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLPENDLK"	"[K].yLPENDLk.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"Q64620"	"Serine/threonine-protein phosphatase 6 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Ppp6c PE=2 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"725.42194"	"1449.83660"	"1449.83535"	"0.86"	"0.00062"	"6/66"	"6"	"66"	"617302.679504395"	"HCD"	"MS2"	"38.03934"	"48.5"	"100.000"	"78.1259"	"26731"	"26731"	"26710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"48.3"	""	"57.2"	""	"85.7"	"1.9"	"105.6"	"97.5"	""	"893"	"26"	"36.000"	"29.000"	"0.10834814074543"	"22"	"0.004959"	"0.06311"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAQSSPAFGDR"	"[R].dAAQSSPAFGDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"725.85883"	"1450.71037"	"1450.71239"	"-1.39"	"-0.00101"	"14/124"	"14"	"124"	"329760.401306152"	"HCD"	"MS2"	"34.65282"	"19.3"	"100.000"	"36.0048"	"9643"	"9643"	"9616"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"19.2"	""	"29.5"	""	"23.5"	""	"39.2"	"43.5"	""	"527"	"41"	"34.000"	"27.000"	"0.00209787988834963"	"25"	"0"	"3.918E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAAQSSPAFGDR"	"[R].dAAQSSPAFGDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"P06214"	"Delta-aminolevulinic acid dehydratase OS=Rattus norvegicus OX=10116 GN=Alad PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"725.85999"	"1450.71269"	"1450.71239"	"0.21"	"0.00015"	"7/124"	"7"	"124"	"204259.020202637"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"35.9570"	"9661"	"9661"	"9633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"18.7"	""	"20.3"	""	"27.4"	""	"30.5"	"30.7"	""	"560"	"40"	"34.000"	"27.000"	"0.00261311204223157"	"19"	"0"	"0.0001634"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFQSNDQTLR"	"[R].lFQSNDQTLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"725.89435"	"1450.78142"	"1450.78516"	"-2.58"	"-0.00187"	"7/94"	"7"	"94"	"436251.493530273"	"HCD"	"MS2"	"35.45465"	"43.0"	"100.000"	"65.9828"	"21844"	"21844"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.1"	""	"50.2"	""	"54.2"	""	"62.1"	"0.3"	"93.2"	"90.5"	""	"983"	"17"	"36.000"	"29.000"	"0.876039164200737"	"19"	"0.0001991"	"0.002336"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFQSNDQTLR"	"[R].lFQSNDQTLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"D4ABY2"	"Coatomer subunit gamma-2 OS=Rattus norvegicus OX=10116 GN=Copg2 PE=3 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"725.89557"	"1450.78386"	"1450.78516"	"-0.89"	"-0.00065"	"6/94"	"6"	"94"	"431298.474487305"	"HCD"	"MS2"	"28.38796"	"38.8"	"100.000"	"65.9931"	"21815"	"21815"	"21785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.8"	""	"46.4"	""	"47.5"	""	"67.1"	"1.1"	"75.6"	"76.0"	""	"958"	"16"	"36.000"	"29.000"	"1.3314826552567"	"22"	"0.006305"	"0.07834"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"725.90015"	"1450.79302"	"1450.79422"	"-0.83"	"-0.00060"	"5/76"	"5"	"76"	"2395130.39422607"	"HCD"	"MS2"	"46.29016"	"225.1"	"100.000"	"46.4329"	"13906"	"13906"	"13895"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"353.6"	""	"275.1"	""	"273.9"	""	"376.9"	""	"449.9"	"409.2"	""	"1003"	"15"	"37.000"	"30.000"	"1.48003142717319"	"14"	"0.002373"	"0.02256"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"484.26920"	"1450.79303"	"1450.79422"	"-0.81"	"-0.00039"	"9/76"	"9"	"76"	"6159651.79187012"	"HCD"	"MS2"	"7.126318"	"242.7"	"100.000"	"46.9819"	"14091"	"14091"	"14074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"400.5"	""	"267.7"	""	"296.2"	""	"392.0"	""	"470.3"	"476.3"	""	"1000"	"30"	"36.000"	"30.000"	"0.0516380702880699"	"21"	"0.002419"	"0.02263"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"725.90033"	"1450.79338"	"1450.79422"	"-0.57"	"-0.00042"	"12/76"	"12"	"76"	"9704867.79455566"	"HCD"	"MS2"	"0"	"707.4"	"100.000"	"46.9705"	"14087"	"14087"	"14074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1205.2"	""	"715.7"	""	"910.8"	""	"1194.6"	""	"1330.4"	"1345.6"	""	"993"	"35"	"36.000"	"29.000"	"0.0152026484482742"	"22"	"0.0001991"	"0.005094"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"484.26950"	"1450.79395"	"1450.79422"	"-0.18"	"-0.00009"	"9/76"	"9"	"76"	"5517591.74041748"	"HCD"	"MS2"	"5.981642"	"216.1"	"100.000"	"46.7196"	"14022"	"14022"	"14003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.7"	""	"234.8"	""	"284.9"	""	"355.7"	""	"413.0"	"439.2"	""	"979"	"31"	"36.000"	"29.000"	"0.0350552199299215"	"20"	"0.002462"	"0.02303"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"725.90063"	"1450.79399"	"1450.79422"	"-0.15"	"-0.00011"	"7/76"	"7"	"76"	"2238550.2868042"	"HCD"	"MS2"	"0"	"184.8"	"100.000"	"47.2414"	"14197"	"14197"	"14186"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.1"	""	"175.2"	""	"204.7"	""	"331.7"	""	"374.2"	"384.4"	""	"979"	"43"	"36.000"	"29.000"	"0.00223744668816481"	"22"	"0.0001686"	"0.001127"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIDNPDYK"	"[R].qIDNPDYk.[G]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"725.90076"	"1450.79424"	"1450.79422"	"0.02"	"0.00001"	"12/76"	"12"	"76"	"7321691.59863281"	"HCD"	"MS2"	"0"	"542.1"	"100.000"	"46.7537"	"14036"	"14036"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"920.8"	""	"535.4"	""	"671.4"	""	"880.6"	""	"1042.0"	"1091.1"	""	"977"	"37"	"36.000"	"29.000"	"0.00999688205040003"	"21"	"0.0001991"	"0.003801"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"484.27802"	"1450.81949"	"1450.82154"	"-1.41"	"-0.00068"	"6/94"	"6"	"94"	"3291406.98284912"	"HCD"	"MS2"	"53.83251"	"70.4"	"100.000"	"50.0662"	"15346"	"15346"	"15324"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.1"	""	"99.1"	""	"100.5"	""	"108.6"	""	"127.5"	"128.5"	""	"900"	"36"	"36.000"	"29.000"	"0.0105247675739671"	"21"	"0"	"7.217E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"484.27832"	"1450.82041"	"1450.82154"	"-0.78"	"-0.00038"	"8/94"	"8"	"94"	"3871187.29864502"	"HCD"	"MS2"	"73.19479"	"100.3"	"100.000"	"49.7374"	"15212"	"15212"	"15193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"156.4"	""	"155.1"	""	"146.3"	""	"139.6"	""	"194.3"	"163.6"	""	"900"	"9"	"36.000"	"29.000"	"6.15477971518131"	"14"	"0.0001686"	"0.001901"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"484.27832"	"1450.82041"	"1450.82154"	"-0.78"	"-0.00038"	"7/94"	"7"	"94"	"4436156.59075928"	"HCD"	"MS2"	"30.22306"	"85.3"	"100.000"	"49.4187"	"15117"	"15117"	"15095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.6"	""	"119.7"	""	"111.7"	""	"125.2"	"2.1"	"163.5"	"150.5"	""	"900"	"34"	"36.000"	"29.000"	"0.0169516709542759"	"22"	"0"	"7.613E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHDPQLLTER"	"[R].iHDPQLLTER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"484.27866"	"1450.82141"	"1450.82154"	"-0.09"	"-0.00004"	"8/94"	"8"	"94"	"2800335.21868896"	"HCD"	"MS2"	"24.82506"	"68.2"	"100.000"	"49.7359"	"15246"	"15246"	"15228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.2"	""	"91.2"	""	"96.7"	""	"99.0"	"3.0"	"138.2"	"119.3"	""	"904"	"25"	"36.000"	"29.000"	"0.133394657045321"	"18"	"0"	"0.0003738"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"484.28085"	"1450.82801"	"1450.83060"	"-1.79"	"-0.00086"	"9/84"	"9"	"84"	"466151.532958984"	"HCD"	"MS2"	"8.23443"	"19.0"	"100.000"	"87.4221"	"30519"	"30519"	"30498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"28.9"	""	"27.6"	""	"30.4"	"3.3"	"38.6"	"32.5"	""	"854"	"26"	"36.000"	"29.000"	"0.108249992522261"	"26"	"0.0001991"	"0.00209"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"484.28098"	"1450.82837"	"1450.83060"	"-1.54"	"-0.00074"	"9/84"	"9"	"84"	"511147.910705566"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"87.4668"	"30502"	"30502"	"30482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.3"	""	"21.0"	""	"30.4"	""	"27.2"	""	"39.8"	"39.9"	""	"837"	"31"	"36.000"	"29.000"	"0.0358670338228909"	"25"	"0.0001991"	"0.003525"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQDIFVQK"	"[K].dQDIFVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"484.28104"	"1450.82856"	"1450.83060"	"-1.41"	"-0.00068"	"6/72"	"6"	"72"	"671880.359924316"	"HCD"	"MS2"	"56.42337"	"26.7"	"100.000"	"75.7128"	"25788"	"25788"	"25761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.2"	""	"37.2"	""	"38.0"	""	"37.4"	"1.2"	"47.8"	"42.6"	""	"837"	"18"	"36.000"	"29.000"	"0.657196833613592"	"24"	"0.002834"	"0.03075"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFEEQAK"	"[R].qLFEEQAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"725.91797"	"1450.82866"	"1450.83060"	"-1.34"	"-0.00097"	"11/72"	"11"	"72"	"341028.119934082"	"HCD"	"MS2"	"100"	"33.7"	"100.000"	"64.3446"	"21176"	"21176"	"21153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.0"	""	"34.5"	""	"46.0"	""	"49.1"	""	"75.1"	"70.9"	""	"837"	"27"	"36.000"	"29.000"	"0.0876386062773598"	"29"	"0.0001991"	"0.002678"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"484.28131"	"1450.82938"	"1450.83060"	"-0.84"	"-0.00041"	"9/84"	"9"	"84"	"2711894.89904785"	"HCD"	"MS2"	"4.450268"	"91.0"	"100.000"	"87.1576"	"30378"	"30378"	"30361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.5"	""	"111.8"	""	"114.1"	""	"159.7"	""	"190.9"	"181.6"	""	"847"	"28"	"36.000"	"29.000"	"0.0710973501674904"	"24"	"0.0001991"	"0.002315"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.5366"	"0.0000"	"1"	"1"	"1"	"484.28131"	"1450.82938"	"1450.83060"	"-0.84"	"-0.00041"	"11/72"	"11"	"72"	"2329306.65197754"	"HCD"	"MS2"	"36.75639"	"84.9"	"100.000"	"69.1592"	"23096"	"23096"	"23076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.6"	""	"107.7"	""	"118.4"	""	"147.3"	""	"152.7"	"160.0"	""	"847"	"41"	"36.000"	"29.000"	"0.00349022491708006"	""	"9.9E-05"	"0.0008723"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"725.91833"	"1450.82939"	"1450.83060"	"-0.83"	"-0.00060"	"7/84"	"7"	"84"	"4536106.93212891"	"HCD"	"MS2"	"0"	"348.9"	"100.000"	"87.0055"	"30317"	"30317"	"30302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"447.2"	""	"439.3"	""	"450.3"	""	"613.9"	""	"691.8"	"676.0"	""	"847"	"41"	"36.000"	"29.000"	"0.00311783705789021"	"27"	"9.9E-05"	"0.0005218"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6279"	"0.0000"	"1"	"1"	"1"	"725.91846"	"1450.82964"	"1450.83060"	"-0.66"	"-0.00048"	"8/84"	"8"	"84"	"3720345.89538574"	"HCD"	"MS2"	"0"	"290.4"	"100.000"	"87.2009"	"30430"	"30430"	"30419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"339.8"	""	"346.7"	""	"392.4"	""	"486.4"	""	"582.3"	"610.2"	""	"835"	"43"	"36.000"	"29.000"	"0.0022369510451182"	""	"0"	"0.000303"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"725.91846"	"1450.82964"	"1450.83060"	"-0.66"	"-0.00048"	"14/72"	"14"	"72"	"5372632.72589111"	"HCD"	"MS2"	"0"	"432.6"	"100.000"	"69.6764"	"23341"	"23341"	"23328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"595.2"	""	"431.4"	""	"546.2"	""	"789.5"	""	"819.6"	"927.2"	""	"835"	"41"	"36.000"	"29.000"	"0.00325579071143461"	""	"0.0001991"	"0.003552"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.5143"	"0.0000"	"1"	"1"	"1"	"484.28140"	"1450.82965"	"1450.83060"	"-0.65"	"-0.00032"	"11/72"	"11"	"72"	"2794040.44787598"	"HCD"	"MS2"	"37.90697"	"103.1"	"100.000"	"69.2687"	"23175"	"23175"	"23152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.4"	""	"127.2"	""	"132.8"	""	"180.2"	""	"192.5"	"201.1"	""	"835"	"35"	"36.000"	"29.000"	"0.0120685885088759"	""	"0.0001686"	"0.00157"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"484.28146"	"1450.82984"	"1450.83060"	"-0.53"	"-0.00025"	"9/84"	"9"	"84"	"885830.674621582"	"HCD"	"MS2"	"5.853722"	"36.6"	"100.000"	"86.8413"	"30251"	"30251"	"30234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.2"	""	"42.3"	""	"50.8"	""	"60.8"	"0.7"	"67.6"	"71.3"	""	"835"	"29"	"36.000"	"29.000"	"0.0573662524567725"	"23"	"0.0001686"	"0.001485"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.5312"	"0.0000"	"1"	"1"	"1"	"484.28146"	"1450.82984"	"1450.83060"	"-0.53"	"-0.00025"	"11/72"	"11"	"72"	"4902852.31884766"	"HCD"	"MS2"	"30.54643"	"159.5"	"100.000"	"69.4488"	"23214"	"23214"	"23200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.5"	""	"188.2"	""	"217.5"	""	"287.4"	""	"296.7"	"299.6"	""	"835"	"32"	"36.000"	"29.000"	"0.0237496098627304"	""	"0.0001991"	"0.002032"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"484.28146"	"1450.82984"	"1450.83060"	"-0.53"	"-0.00025"	"11/72"	"11"	"72"	"4888094.7331543"	"HCD"	"MS2"	"36.50861"	"161.9"	"100.000"	"69.5794"	"23301"	"23301"	"23283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.5"	"2.7"	"187.8"	""	"221.5"	""	"286.9"	""	"298.6"	"318.5"	""	"835"	"31"	"36.000"	"29.000"	"0.033624549920061"	"29"	"0.0001991"	"0.00219"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFEEQAK"	"[R].qLFEEQAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"725.91858"	"1450.82988"	"1450.83060"	"-0.50"	"-0.00036"	"7/72"	"7"	"72"	"348373.815002441"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"64.6847"	"21315"	"21315"	"21291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.6"	""	"37.9"	""	"41.2"	""	"50.4"	""	"62.6"	"64.4"	""	"835"	"17"	"36.000"	"29.000"	"0.852425591899529"	"23"	"0.0001991"	"0.003103"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"725.91864"	"1450.83000"	"1450.83060"	"-0.41"	"-0.00030"	"7/72"	"7"	"72"	"1277005.7980957"	"HCD"	"MS2"	"4.476613"	"114.4"	"100.000"	"69.0531"	"23053"	"23053"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.0"	""	"107.5"	""	"143.6"	""	"232.9"	""	"221.9"	"221.4"	""	"835"	"41"	"36.000"	"29.000"	"0.00316706137574684"	""	"9.9E-05"	"0.0005204"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"484.28159"	"1450.83020"	"1450.83060"	"-0.27"	"-0.00013"	"9/84"	"9"	"84"	"1263532.71295166"	"HCD"	"MS2"	"6.196832"	"45.0"	"100.000"	"86.8337"	"30282"	"30282"	"30261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.8"	""	"54.5"	""	"58.8"	""	"76.1"	""	"87.1"	"84.2"	""	"832"	"31"	"36.000"	"29.000"	"0.0300672238298503"	"25"	"0.0001686"	"0.001567"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"725.91876"	"1450.83025"	"1450.83060"	"-0.24"	"-0.00018"	"7/84"	"7"	"84"	"459069.956359863"	"HCD"	"MS2"	"8.428758"	"42.1"	"100.000"	"86.7258"	"30205"	"30205"	"30184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	""	"52.5"	""	"56.6"	""	"72.3"	""	"77.5"	"80.9"	""	"821"	"44"	"36.000"	"29.000"	"0.00168001500819169"	"26"	"0"	"7.121E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"725.91876"	"1450.83025"	"1450.83060"	"-0.24"	"-0.00018"	"6/72"	"6"	"72"	"433344.097290039"	"HCD"	"MS2"	"0"	"41.1"	"100.000"	"69.9235"	"23407"	"23407"	"23388"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.6"	""	"45.7"	""	"49.5"	""	"71.4"	"0.1"	"78.8"	"80.9"	""	"821"	"35"	"36.000"	"29.000"	"0.0141681504997369"	"28"	"0.0001686"	"0.00107"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQDIFVQK"	"[K].dQDIFVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.4167"	"0.0000"	"1"	"1"	"1"	"725.91876"	"1450.83025"	"1450.83060"	"-0.24"	"-0.00018"	"6/72"	"6"	"72"	"1179251.67834473"	"HCD"	"MS2"	"53.56336"	"101.6"	"100.000"	"75.6702"	"25739"	"25739"	"25721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.9"	""	"141.7"	""	"155.4"	""	"140.0"	"1.7"	"159.6"	"161.2"	""	"821"	"36"	"36.000"	"29.000"	"0.0110742203701864"	""	"0.0001686"	"0.001197"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFEEQAK"	"[R].qLFEEQAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"0"	"2"	"2"	"0.2941"	"0.0000"	"1"	"1"	"1"	"725.91888"	"1450.83049"	"1450.83060"	"-0.07"	"-0.00005"	"7/72"	"7"	"72"	"328081.067993164"	"HCD"	"MS2"	"23.1404"	"34.1"	"100.000"	"64.3804"	"21157"	"21157"	"21139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.3"	""	"42.8"	""	"34.5"	""	"58.7"	""	"71.2"	"67.7"	""	"818"	"51"	"36.000"	"29.000"	"0.000299725234053812"	""	"0"	"0.0001539"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQDIFVQK"	"[K].dQDIFVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.3250"	"0.0000"	"1"	"1"	"1"	"725.91888"	"1450.83049"	"1450.83060"	"-0.07"	"-0.00005"	"14/72"	"14"	"72"	"746313.336547852"	"HCD"	"MS2"	"30.14719"	"64.6"	"100.000"	"75.9546"	"25886"	"25886"	"25865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.4"	""	"92.6"	""	"94.4"	""	"88.2"	""	"105.8"	"109.7"	""	"818"	"40"	"36.000"	"29.000"	"0.00401534908695174"	""	"0"	"0.0003608"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"725.91888"	"1450.83049"	"1450.83060"	"-0.07"	"-0.00005"	"14/72"	"14"	"72"	"7780415.7612915"	"HCD"	"MS2"	"0"	"629.7"	"100.000"	"69.4021"	"23229"	"23229"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"926.3"	""	"621.3"	""	"736.3"	""	"1219.3"	""	"1193.1"	"1282.8"	""	"818"	"46"	"36.000"	"29.000"	"0.000926239521805561"	""	"0.0001991"	"0.002427"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"484.28171"	"1450.83057"	"1450.83060"	"-0.02"	"-0.00001"	"9/84"	"9"	"84"	"2868146.99359131"	"HCD"	"MS2"	"5.545678"	"95.7"	"100.000"	"87.1155"	"30396"	"30396"	"30381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.8"	""	"114.6"	""	"118.0"	""	"174.4"	""	"195.2"	"200.9"	""	"817"	"32"	"36.000"	"29.000"	"0.028853072091642"	"25"	"0.0001686"	"0.001775"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"725.91895"	"1450.83061"	"1450.83060"	"0.01"	"0.00001"	"7/84"	"7"	"84"	"2990929.53411865"	"HCD"	"MS2"	"0"	"228.7"	"100.000"	"87.2962"	"30434"	"30434"	"30418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"268.6"	""	"281.9"	""	"310.3"	""	"379.3"	""	"467.8"	"465.7"	""	"817"	"45"	"36.000"	"29.000"	"0.00127406639510237"	""	"0"	"0.0002573"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQDIFVQK"	"[K].dQDIFVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"725.91907"	"1450.83086"	"1450.83060"	"0.18"	"0.00013"	"11/72"	"11"	"72"	"292973.41003418"	"HCD"	"MS2"	"13.57151"	"28.3"	"100.000"	"75.9973"	"25872"	"25872"	"25849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.1"	""	"41.3"	""	"43.5"	""	"30.4"	""	"52.3"	"51.7"	""	"817"	"30"	"36.000"	"29.000"	"0.0418015187346688"	""	"0.0001686"	"0.001923"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"725.91913"	"1450.83098"	"1450.83060"	"0.26"	"0.00019"	"7/84"	"7"	"84"	"4177344.59124756"	"HCD"	"MS2"	"0.6327795"	"320.7"	"100.000"	"86.9214"	"30317"	"30317"	"30299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"403.0"	""	"422.1"	""	"412.2"	""	"558.7"	""	"641.6"	"607.7"	""	"817"	"42"	"36.000"	"29.000"	"0.00247851790636904"	"27"	"0"	"0.0003509"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"725.91919"	"1450.83110"	"1450.83060"	"0.35"	"0.00025"	"14/72"	"14"	"72"	"7841386.78161621"	"HCD"	"MS2"	"0"	"641.2"	"100.000"	"69.3363"	"23169"	"23169"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"957.2"	""	"646.6"	""	"783.6"	""	"1208.8"	""	"1196.0"	"1288.1"	""	"817"	"41"	"36.000"	"29.000"	"0.00328240420912824"	""	"0.0001991"	"0.003696"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGNFEVGk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"725.91925"	"1450.83122"	"1450.83060"	"0.43"	"0.00031"	"7/84"	"7"	"84"	"239832.633728027"	"HCD"	"MS2"	"19.25212"	"20.8"	"100.000"	"86.6147"	"30194"	"30194"	"30177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"26.3"	""	"26.1"	""	"43.3"	""	"42.5"	"37.5"	""	"817"	"37"	"36.000"	"29.000"	"0.00908222090331098"	"20"	"0"	"0.0003367"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"725.91925"	"1450.83122"	"1450.83060"	"0.43"	"0.00031"	"7/72"	"7"	"72"	"463905.428894043"	"HCD"	"MS2"	"11.33573"	"45.0"	"100.000"	"69.9967"	"23471"	"23471"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"55.2"	""	"58.5"	""	"75.3"	""	"87.0"	"91.6"	""	"817"	"38"	"36.000"	"29.000"	"0.0059592562532248"	""	"9.9E-05"	"0.0005101"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"725.91925"	"1450.83122"	"1450.83060"	"0.43"	"0.00031"	"14/72"	"14"	"72"	"4382414.20489502"	"HCD"	"MS2"	"0"	"350.3"	"100.000"	"69.6193"	"23284"	"23284"	"23267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.8"	""	"356.8"	""	"431.4"	""	"628.4"	""	"674.6"	"752.8"	""	"817"	"44"	"36.000"	"29.000"	"0.00148317385373586"	""	"0.0001686"	"0.001252"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQIAEEFK"	"[R].qQIAEEFk.[T]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"725.91956"	"1450.83183"	"1450.83060"	"0.85"	"0.00062"	"7/72"	"7"	"72"	"950296.223449707"	"HCD"	"MS2"	"6.950881"	"82.1"	"100.000"	"69.1075"	"23109"	"23109"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.2"	""	"101.4"	""	"93.9"	""	"149.4"	""	"150.3"	"159.7"	""	"807"	"42"	"36.000"	"29.000"	"0.0024369327195337"	""	"9.9E-05"	"0.0008294"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQDIFVQK"	"[K].dQDIFVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"725.91962"	"1450.83196"	"1450.83060"	"0.93"	"0.00068"	"6/72"	"6"	"72"	"763107.372253418"	"HCD"	"MS2"	"55.12381"	"67.4"	"100.000"	"75.6023"	"25743"	"25743"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.1"	""	"90.3"	""	"98.0"	""	"103.8"	""	"111.6"	"108.8"	""	"807"	"22"	"36.000"	"29.000"	"0.277232115545743"	"26"	"0.0001686"	"0.001765"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQDIFVQK"	"[K].dQDIFVQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"P46844"	"Biliverdin reductase A OS=Rattus norvegicus OX=10116 GN=Blvra PE=1 SV=1"	"0"	"3"	"3"	"0.4167"	"0.0000"	"1"	"1"	"1"	"484.28229"	"1450.83231"	"1450.83060"	"1.18"	"0.00057"	"5/72"	"5"	"72"	"671568.956604004"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"75.8798"	"25824"	"25824"	"25801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"36.9"	""	"39.2"	""	"28.3"	""	"43.6"	"45.5"	""	"807"	"12"	"36.000"	"29.000"	"2.73428348320908"	"20"	"0.009444"	"0.1254"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFDELVK"	"[K].eLFDELVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"725.93011"	"1450.85295"	"1450.85575"	"-1.93"	"-0.00140"	"7/64"	"7"	"64"	"2135501.18273926"	"HCD"	"MS2"	"0"	"181.3"	"100.000"	"111.9014"	"40294"	"40294"	"40268"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"226.7"	""	"250.8"	""	"248.4"	""	"313.2"	"1.2"	"340.3"	"338.1"	""	"702"	"50"	"35.000"	"28.000"	"0.000325317268006152"	"26"	"9.9E-05"	"0.0006479"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"484.28918"	"1450.85300"	"1450.85575"	"-1.90"	"-0.00092"	"8/66"	"8"	"66"	"440339.308837891"	"HCD"	"MS2"	"31.59774"	"18.4"	"100.000"	"87.8632"	"30662"	"30662"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"32.6"	""	"24.6"	""	"29.8"	""	"30.8"	"31.2"	""	"702"	"28"	"35.000"	"28.000"	"0.0539892278746365"	"23"	"0.001049"	"0.008714"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELFDELVK"	"[K].eLFDELVk.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"Q64640"	"Adenosine kinase OS=Rattus norvegicus OX=10116 GN=Adk PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"725.93054"	"1450.85381"	"1450.85575"	"-1.34"	"-0.00097"	"7/64"	"7"	"64"	"2363851.91204834"	"HCD"	"MS2"	"0"	"191.1"	"100.000"	"111.8250"	"40249"	"40249"	"40231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"260.3"	""	"225.0"	""	"254.0"	""	"325.5"	""	"377.2"	"374.5"	""	"706"	"50"	"35.000"	"28.000"	"0.000364564776233773"	"26"	"9.9E-05"	"0.0006234"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"484.28952"	"1450.85401"	"1450.85575"	"-1.20"	"-0.00058"	"6/66"	"6"	"66"	"4737958.81976318"	"HCD"	"MS2"	"5.25462"	"158.4"	"100.000"	"88.1205"	"30802"	"30802"	"30783"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.9"	""	"253.1"	""	"176.9"	""	"275.5"	"0.5"	"245.2"	"262.1"	""	"690"	"39"	"35.000"	"28.000"	"0.00445470649396669"	"27"	"9.9E-05"	"0.0009905"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6829"	"0.0000"	"1"	"1"	"1"	"484.28961"	"1450.85428"	"1450.85575"	"-1.01"	"-0.00049"	"6/66"	"6"	"66"	"4126161.33477783"	"HCD"	"MS2"	"2.963635"	"138.7"	"100.000"	"88.1473"	"30774"	"30774"	"30760"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"260.5"	""	"214.6"	""	"150.5"	""	"230.9"	""	"232.6"	"224.8"	""	"709"	"41"	"35.000"	"28.000"	"0.00304520293373663"	"28"	"0.0001991"	"0.002097"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"484.28964"	"1450.85437"	"1450.85575"	"-0.95"	"-0.00046"	"6/66"	"6"	"66"	"2786645.07427979"	"HCD"	"MS2"	"2.999353"	"93.5"	"100.000"	"88.4397"	"30892"	"30892"	"30875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.6"	""	"128.4"	""	"110.9"	""	"155.4"	""	"168.9"	"168.2"	""	"709"	"39"	"35.000"	"28.000"	"0.00457737232495997"	"27"	"0.0001686"	"0.001261"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6129"	"0.0000"	"1"	"1"	"1"	"484.28970"	"1450.85456"	"1450.85575"	"-0.82"	"-0.00040"	"8/66"	"8"	"66"	"287854.635253906"	"HCD"	"MS2"	"7.039554"	"14.3"	"100.000"	"88.7532"	"31019"	"31019"	"30994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.6"	""	"26.9"	""	"14.7"	""	"20.5"	""	"22.3"	"30.9"	""	"701"	"31"	"35.000"	"28.000"	"0.0249280336535492"	"26"	"0.0009964"	"0.008484"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"484.28986"	"1450.85501"	"1450.85575"	"-0.51"	"-0.00025"	"5/66"	"5"	"66"	"703563.89239502"	"HCD"	"MS2"	"12.19111"	"29.6"	"100.000"	"87.8327"	"30685"	"30685"	"30665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.7"	""	"50.7"	""	"42.3"	""	"44.0"	""	"51.6"	"48.3"	""	"691"	"25"	"35.000"	"28.000"	"0.106524143681115"	"24"	"0.004751"	"0.05587"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"484.28992"	"1450.85520"	"1450.85575"	"-0.38"	"-0.00019"	"6/66"	"6"	"66"	"1957619.51086426"	"HCD"	"MS2"	"4.925471"	"68.2"	"100.000"	"88.3968"	"30914"	"30914"	"30902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.6"	""	"102.9"	""	"78.3"	""	"111.9"	"0.2"	"114.2"	"123.9"	""	"691"	"41"	"35.000"	"28.000"	"0.00300917920329826"	"27"	"0.0001686"	"0.001097"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"725.93134"	"1450.85539"	"1450.85575"	"-0.25"	"-0.00018"	"7/66"	"7"	"66"	"8653273.66119385"	"HCD"	"MS2"	"0.3210725"	"580.3"	"94.325"	"88.2419"	"30813"	"30813"	"30802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1128.2"	""	"881.6"	""	"631.2"	""	"969.5"	""	"938.1"	"939.1"	""	"684"	"46"	"35.000"	"28.000"	"0.000824187656610815"	"27"	"0.0001686"	"0.001236"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"725.93140"	"1450.85552"	"1450.85575"	"-0.16"	"-0.00012"	"7/66"	"7"	"66"	"2898407.22857666"	"HCD"	"MS2"	"0"	"219.5"	"100.000"	"88.5274"	"30928"	"30928"	"30914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"394.5"	""	"321.2"	""	"243.7"	""	"354.9"	""	"369.0"	"395.8"	""	"690"	"46"	"35.000"	"28.000"	"0.000903273137835549"	"27"	"9.9E-05"	"0.0009624"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"725.93152"	"1450.85576"	"1450.85575"	"0.01"	"0.00000"	"7/66"	"7"	"66"	"2128621.83123779"	"HCD"	"MS2"	"13.76207"	"150.9"	"100.000"	"87.9488"	"30695"	"30695"	"30686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"309.5"	""	"245.3"	""	"149.9"	""	"259.7"	""	"239.9"	"229.7"	""	"679"	"34"	"35.000"	"28.000"	"0.0132080826725558"	"23"	"0.0001686"	"0.001281"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"725.93152"	"1450.85576"	"1450.85575"	"0.01"	"0.00000"	"7/66"	"7"	"66"	"8616198.25274658"	"HCD"	"MS2"	"0"	"594.1"	"100.000"	"88.1529"	"30816"	"30816"	"30799"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1141.0"	""	"919.6"	""	"650.7"	""	"957.4"	""	"990.0"	"970.3"	""	"679"	"44"	"35.000"	"28.000"	"0.00131473970450889"	"26"	"0.0001686"	"0.00134"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"725.93164"	"1450.85600"	"1450.85575"	"0.17"	"0.00013"	"7/66"	"7"	"66"	"294338.880126953"	"HCD"	"MS2"	"7.746404"	"25.1"	"100.000"	"88.8180"	"31045"	"31045"	"31025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.2"	""	"39.2"	""	"31.6"	""	"37.6"	""	"45.2"	"44.4"	""	"677"	"36"	"35.000"	"28.000"	"0.00902731657940521"	"23"	"9.9E-05"	"0.0008554"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"725.93164"	"1450.85600"	"1450.85575"	"0.17"	"0.00013"	"7/66"	"7"	"66"	"2897255.87298584"	"HCD"	"MS2"	"0"	"211.5"	"100.000"	"88.4315"	"30929"	"30929"	"30912"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"383.6"	""	"313.1"	""	"230.7"	""	"342.4"	"2.5"	"348.6"	"379.6"	""	"677"	"44"	"35.000"	"28.000"	"0.00134449339495406"	"26"	"0.0001686"	"0.001109"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"725.93188"	"1450.85649"	"1450.85575"	"0.51"	"0.00037"	"7/66"	"7"	"66"	"2183195.74865723"	"HCD"	"MS2"	"20.26711"	"157.9"	"100.000"	"87.8601"	"30696"	"30696"	"30681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"317.9"	""	"255.2"	""	"164.0"	""	"273.7"	"1.2"	"241.2"	"238.4"	""	"664"	"43"	"35.000"	"28.000"	"0.00148640816986552"	"25"	"9.9E-05"	"0.0006512"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEPYLTK"	"[K].lEEPYLTk.[F]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"725.93201"	"1450.85674"	"1450.85575"	"0.68"	"0.00049"	"7/66"	"7"	"66"	"244138.391845703"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"88.7426"	"31054"	"31054"	"31036"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.2"	""	"29.0"	""	"26.3"	""	"30.2"	""	"37.2"	"39.3"	""	"663"	"26"	"35.000"	"28.000"	"0.0846220481832204"	"21"	"0.0001991"	"0.004026"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPYSEPSK"	"[K].eGPYSEPSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"726.39233"	"1451.77739"	"1451.77823"	"-0.58"	"-0.00042"	"8/78"	"8"	"78"	"838576.500915527"	"HCD"	"MS2"	"31.22754"	"67.0"	"100.000"	"40.8937"	"11625"	"11625"	"11596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.3"	""	"53.6"	""	"55.3"	""	"136.8"	""	"158.9"	"167.9"	""	"965"	"43"	"36.000"	"29.000"	"0.00255562611677725"	"24"	"0"	"0.0002924"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGPYSEPSK"	"[K].eGPYSEPSk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"726.39270"	"1451.77812"	"1451.77823"	"-0.07"	"-0.00005"	"7/78"	"7"	"78"	"913173.681152344"	"HCD"	"MS2"	"19.92572"	"71.3"	"100.000"	"40.7593"	"11605"	"11605"	"11579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.4"	""	"64.6"	""	"68.1"	""	"132.4"	"0.1"	"169.9"	"170.5"	""	"949"	"38"	"36.000"	"29.000"	"0.00734913485673972"	"22"	"0"	"8.588E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEDMENK"	"[R].lVEDmENk.[I]"	"N-Term(TMT6plex); M5(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"726.39294"	"1451.77861"	"1451.78160"	"-2.06"	"-0.00149"	"7/64"	"7"	"64"	"718802.666748047"	"HCD"	"MS2"	"0"	"59.1"	"100.000"	"44.8289"	"13223"	"13223"	"13195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.6"	""	"58.5"	""	"64.5"	""	"134.6"	"0.6"	"104.6"	"114.9"	""	"949"	"27"	"36.000"	"29.000"	"0.0887638675603572"	"23"	"0.008255"	"0.1046"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSELSQLYR"	"[K].qVSELSQLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"726.40631"	"1451.80535"	"1451.80556"	"-0.15"	"-0.00011"	"6/96"	"6"	"96"	"188624.383361816"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"83.1229"	"28785"	"28785"	"28764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"21.1"	""	"19.1"	""	"28.4"	""	"25.2"	"37.0"	""	"912"	"36"	"36.000"	"29.000"	"0.0106405687640014"	"16"	"0.001615"	"0.01352"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVSELSQLYR"	"[K].qVSELSQLYR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"726.40704"	"1451.80681"	"1451.80556"	"0.86"	"0.00063"	"5/96"	"5"	"96"	"203663.219482422"	"HCD"	"MS2"	"23.77104"	"14.3"	"100.000"	"83.3632"	"28854"	"28854"	"28832"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"16.5"	""	"15.7"	""	"22.7"	""	"27.3"	"32.1"	""	"900"	"27"	"36.000"	"29.000"	"0.0993602129858504"	"16"	"0.0001686"	"0.001879"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIGNFEVGK"	"[R].eIGnFEVGk.[D]"	"N-Term(TMT6plex); N4(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"726.41010"	"1451.81291"	"1451.81462"	"-1.17"	"-0.00085"	"7/84"	"7"	"84"	"194516.216918945"	"HCD"	"MS2"	"15.21132"	"19.7"	"100.000"	"91.8169"	"32290"	"32290"	"32267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.1"	"2.1"	"20.6"	""	"23.5"	""	"34.3"	""	"48.4"	"41.1"	""	"901"	"35"	"36.000"	"29.000"	"0.0159475802158087"	"19"	"0.0001991"	"0.003713"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPTGDEFVK"	"[K].tPTGDEFVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O54747"	"DNA polymerase delta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Pold1 PE=2 SV=1"	"O54747"	"DNA polymerase delta catalytic subunit OS=Rattus norvegicus OX=10116 GN=Pold1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.41174"	"1451.81621"	"1451.81462"	"1.10"	"0.00080"	"6/74"	"6"	"74"	"274068.144226074"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"62.1867"	"20267"	"20267"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.9"	""	"35.3"	""	"43.8"	""	"47.8"	"0.2"	"64.5"	"54.5"	""	"864"	"28"	"36.000"	"29.000"	"0.0646373803432795"	"14"	"0.007989"	"0.1013"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qmVETELk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"726.41278"	"1451.81828"	"1451.81799"	"0.20"	"0.00015"	"7/74"	"7"	"74"	"1140901.97412109"	"HCD"	"MS2"	"0"	"82.5"	"100.000"	"47.7289"	"14433"	"14433"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.0"	""	"53.2"	""	"78.9"	""	"244.1"	""	"158.3"	"172.5"	""	"856"	"22"	"36.000"	"29.000"	"0.246856046331884"	"15"	"0.004213"	"0.04562"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qmVETELk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"726.41278"	"1451.81828"	"1451.81799"	"0.20"	"0.00015"	"7/74"	"7"	"74"	"1210259.10058594"	"HCD"	"MS2"	"0"	"80.9"	"100.000"	"48.0697"	"14534"	"14534"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.3"	""	"67.3"	""	"76.1"	""	"238.2"	""	"158.2"	"155.8"	""	"856"	"22"	"36.000"	"29.000"	"0.265120780132863"	"14"	"0.004792"	"0.05641"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qmVETELk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"726.41406"	"1451.82085"	"1451.81799"	"1.97"	"0.00143"	"7/74"	"7"	"74"	"1171064.69549561"	"HCD"	"MS2"	"10.18932"	"84.3"	"100.000"	"47.1975"	"14217"	"14217"	"14193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.3"	""	"61.6"	""	"69.3"	""	"259.5"	""	"164.8"	"171.8"	""	"837"	"23"	"36.000"	"29.000"	"0.213154969537436"	"15"	"0.002166"	"0.01983"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVETELK"	"[R].qmVETELk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K8(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"726.41479"	"1451.82231"	"1451.81799"	"2.98"	"0.00216"	"6/74"	"6"	"74"	"1114638.18322754"	"HCD"	"MS2"	"0"	"84.9"	"100.000"	"47.5264"	"14313"	"14313"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.6"	""	"59.0"	""	"69.7"	""	"264.5"	"0.9"	"168.0"	"156.8"	""	"846"	"25"	"36.000"	"29.000"	"0.127450154823073"	"22"	"0.008255"	"0.1049"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTESEVLK"	"[R].tSTESEVLk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"726.42102"	"1451.83476"	"1451.83575"	"-0.68"	"-0.00049"	"8/74"	"8"	"74"	"883116.113769531"	"HCD"	"MS2"	"0"	"84.1"	"100.000"	"46.6679"	"13965"	"13965"	"13955"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.9"	""	"115.3"	""	"112.5"	""	"116.3"	""	"180.4"	"160.1"	""	"765"	"22"	"35.000"	"28.000"	"0.259197876661083"	"22"	"0.0001686"	"0.001459"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTESEVLK"	"[R].tSTESEVLk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"726.42133"	"1451.83537"	"1451.83575"	"-0.26"	"-0.00019"	"8/74"	"8"	"74"	"1830165.34020996"	"HCD"	"MS2"	"28.75698"	"168.4"	"100.000"	"46.4098"	"13897"	"13897"	"13884"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.4"	""	"198.9"	""	"218.6"	""	"268.7"	""	"336.6"	"313.9"	""	"784"	"21"	"35.000"	"28.000"	"0.289925267822829"	"26"	"0.0001686"	"0.001027"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFQDITQK"	"[K].iFQDITqk.[S]"	"N-Term(TMT6plex); Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"0"	"3"	"3"	"0.1875"	"0.0000"	"1"	"1"	"1"	"484.62122"	"1451.84909"	"1451.85100"	"-1.31"	"-0.00064"	"4/70"	"4"	"70"	"411712.054016113"	"HCD"	"MS2"	"54.50222"	"20.2"	"100.000"	"72.4053"	"24413"	"24413"	"24384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"28.0"	""	"29.2"	""	"36.0"	""	"35.3"	"35.9"	""	"699"	"16"	"35.000"	"28.000"	"0.951584107173231"	"26"	"0.003818"	"0.04108"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"484.62131"	"1451.84937"	"1451.85100"	"-1.12"	"-0.00054"	"8/70"	"8"	"70"	"499778.928344727"	"HCD"	"MS2"	"39.83652"	"14.6"	"100.000"	"92.2211"	"32419"	"32419"	"32391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"17.4"	""	"18.8"	""	"25.0"	"1.1"	"30.9"	"24.7"	""	"710"	"7"	"35.000"	"28.000"	"7.73086969185371"	"16"	"0.007379"	"0.09307"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IFQDITQK"	"[K].iFQDITqk.[S]"	"N-Term(TMT6plex); Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"6"	"484.62149"	"1451.84992"	"1451.85100"	"-0.75"	"-0.00036"	"4/70"	"4"	"70"	"574417.080871582"	"HCD"	"MS2"	"46.91792"	"27.8"	"100.000"	"66.7168"	"22138"	"22138"	"22121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.3"	""	"40.0"	""	"41.5"	""	"38.8"	"2.9"	"48.5"	"47.0"	""	"696"	"10"	"35.000"	"28.000"	"3.15921544502008"	"21"	"0.006267"	"0.07802"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IFQDITQK"	"[K].iFQDITqk.[S]"	"N-Term(TMT6plex); Q7(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"Q66HG3"	"Beta-Ala-His dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"5"	"484.62186"	"1451.85102"	"1451.85100"	"0.01"	"0.00000"	"4/70"	"4"	"70"	"671257.08203125"	"HCD"	"MS2"	"59.20438"	"31.8"	"100.000"	"65.8652"	"21796"	"21796"	"21769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.0"	""	"52.2"	""	"37.9"	""	"43.1"	""	"68.4"	"53.9"	""	"677"	"9"	"35.000"	"28.000"	"3.98619622036793"	"21"	"0.007259"	"0.0922"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"726.42987"	"1451.85246"	"1451.85100"	"1.01"	"0.00073"	"7/70"	"7"	"70"	"219640.925354004"	"HCD"	"MS2"	"25.66145"	"21.5"	"100.000"	"92.1059"	"32372"	"32372"	"32350"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.8"	""	"23.0"	""	"28.8"	""	"25.5"	""	"45.6"	"51.0"	""	"679"	"46"	"35.000"	"28.000"	"0.000926487957263329"	"22"	"0"	"5.718E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIAEAYLGK"	"[K].eIAEAYLGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7907"	"0.0000"	"1"	"1"	"1"	"726.42993"	"1451.85259"	"1451.85100"	"1.09"	"0.00079"	"7/70"	"7"	"70"	"209173.981811523"	"HCD"	"MS2"	"27.94238"	"20.0"	"100.000"	"91.9760"	"32355"	"32355"	"32326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.6"	""	"22.8"	""	"25.2"	""	"33.2"	""	"41.4"	"46.4"	""	"679"	"43"	"35.000"	"28.000"	"0.001655159223901"	"24"	"0"	"7.956E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVEHGGFYR"	"[R].qMVEHGGFYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"484.91269"	"1452.72351"	"1452.72553"	"-1.39"	"-0.00067"	"8/90"	"8"	"90"	"5815047.67047119"	"HCD"	"MS2"	"33.39628"	"168.5"	"100.000"	"38.3603"	"10597"	"10597"	"10582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.1"	""	"201.1"	""	"218.2"	""	"214.4"	""	"375.7"	"373.5"	""	"643"	"35"	"35.000"	"28.000"	"0.0102371950323495"	"21"	"9.9E-05"	"0.0006467"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QMVEHGGFYR"	"[R].qMVEHGGFYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"484.91302"	"1452.72452"	"1452.72553"	"-0.70"	"-0.00034"	"6/90"	"6"	"90"	"6387994.74157715"	"HCD"	"MS2"	"34.66669"	"187.9"	"100.000"	"38.2433"	"10585"	"10585"	"10565"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"242.4"	""	"217.6"	""	"231.4"	""	"269.7"	""	"397.9"	"428.0"	""	"687"	"31"	"35.000"	"28.000"	"0.0243739963295424"	"20"	"0"	"0.0003413"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEASVETGDR"	"[K].lFEASVETGDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"726.88037"	"1452.75347"	"1452.75319"	"0.19"	"0.00014"	"9/94"	"9"	"94"	"852233.511352539"	"HCD"	"MS2"	"49.88286"	"72.2"	"100.000"	"75.0366"	"25481"	"25481"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.5"	""	"82.8"	""	"109.2"	""	"98.8"	""	"128.0"	"150.5"	""	"860"	"33"	"36.000"	"29.000"	"0.0211577000343024"	""	"0"	"8.998E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LFEASVETGDR"	"[K].lFEASVETGDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.0357"	"0.0000"	"1"	"1"	"1"	"726.88043"	"1452.75359"	"1452.75319"	"0.27"	"0.00020"	"8/94"	"8"	"94"	"797764.182556152"	"HCD"	"MS2"	"46.08006"	"68.0"	"100.000"	"75.1712"	"25567"	"25567"	"25550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.1"	""	"89.7"	""	"88.9"	""	"99.5"	"0.5"	"124.2"	"137.0"	""	"863"	"28"	"36.000"	"29.000"	"0.068230852894517"	""	"0.0001686"	"0.001644"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEASVETGDR"	"[K].lFEASVETGDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"726.88062"	"1452.75395"	"1452.75319"	"0.53"	"0.00038"	"7/94"	"7"	"94"	"258183.854003906"	"HCD"	"MS2"	"25.21087"	"27.5"	"100.000"	"75.4779"	"25692"	"25692"	"25665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"37.6"	""	"31.2"	""	"42.7"	""	"59.6"	"56.4"	""	"866"	"18"	"36.000"	"29.000"	"0.762935628096236"	"21"	"0.000264"	"0.006075"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMAEDTVNK"	"[R].sMAEDTVNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.89246"	"1452.77764"	"1452.77685"	"0.54"	"0.00039"	"12/76"	"12"	"76"	"435414.13470459"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"42.7133"	"12361"	"12361"	"12330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.4"	""	"44.3"	""	"44.2"	""	"63.1"	""	"102.1"	"99.3"	""	"893"	"35"	"36.000"	"29.000"	"0.0147170736487235"	"15"	"0"	"0.000142"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMAEDTVNK"	"[R].sMAEDTVNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"726.89380"	"1452.78032"	"1452.77685"	"2.39"	"0.00174"	"8/76"	"8"	"76"	"507273.454956055"	"HCD"	"MS2"	"43.22039"	"49.4"	"100.000"	"42.4854"	"12302"	"12302"	"12271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.6"	""	"51.2"	""	"51.9"	""	"81.3"	""	"113.9"	"96.4"	""	"897"	"50"	"36.000"	"29.000"	"0.000411872169522886"	"21"	"0"	"1.849E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPHYSQVIHR"	"[K].sPHYSQVIHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.89789"	"1452.78850"	"1452.79091"	"-1.66"	"-0.00121"	"10/88"	"10"	"88"	"325586.153564453"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"24.5093"	"5036"	"5036"	"5010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"22.5"	""	"32.4"	""	"33.3"	""	"26.1"	"31.5"	""	"856"	"24"	"36.000"	"29.000"	"0.186828776198791"	"14"	"0.0001991"	"0.003698"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPHYSQVIHR"	"[K].sPHYSQVIHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"484.93484"	"1452.78998"	"1452.79091"	"-0.64"	"-0.00031"	"8/88"	"8"	"88"	"18099213.2481689"	"HCD"	"MS2"	"9.406348"	"308.5"	"66.964"	"24.4263"	"5039"	"5039"	"5020"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"436.0"	"2.6"	"421.8"	""	"418.8"	""	"505.7"	"9.2"	"584.1"	"545.3"	""	"845"	"42"	"36.000"	"29.000"	"0.00269666322915506"	"19"	"0"	"1.439E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPHYSQVIHR"	"[K].sPHYSQVIHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"4"	"4"	"0.8974"	"0.0000"	"1"	"1"	"1"	"363.95297"	"1452.79006"	"1452.79091"	"-0.59"	"-0.00021"	"13/88"	"13"	"88"	"30232032.2585449"	"HCD"	"MS2"	"7.363859"	"146.7"	"46.994"	"24.3872"	"5023"	"5023"	"5004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.9"	""	"194.5"	""	"198.9"	""	"204.5"	"3.1"	"282.5"	"318.1"	""	"845"	"39"	"36.000"	"29.000"	"0.00530672659661084"	"19"	"0"	"0.0002729"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPHYSQVIHR"	"[K].sPHYSQVIHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"4"	"4"	"0.8864"	"0.0000"	"1"	"1"	"1"	"363.95297"	"1452.79006"	"1452.79091"	"-0.59"	"-0.00021"	"13/88"	"13"	"88"	"25229345.4631958"	"HCD"	"MS2"	"8.26453"	"230.5"	"87.036"	"24.4959"	"5030"	"5030"	"5010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"276.6"	""	"271.1"	""	"308.9"	""	"310.0"	""	"398.5"	"624.3"	""	"845"	"44"	"36.000"	"29.000"	"0.00160630019945437"	"20"	"0.0001686"	"0.001058"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPHYSQVIHR"	"[K].sPHYSQVIHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.89874"	"1452.79021"	"1452.79091"	"-0.48"	"-0.00035"	"9/88"	"9"	"88"	"384228.66595459"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"24.3688"	"5016"	"5016"	"4994"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"24.2"	""	"27.2"	""	"33.2"	""	"39.6"	"33.3"	""	"845"	"37"	"36.000"	"29.000"	"0.0080505715333947"	"15"	"0"	"0.0001078"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPHYSQVIHR"	"[K].sPHYSQVIHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"484.93515"	"1452.79090"	"1452.79091"	"-0.01"	"0.00000"	"8/88"	"8"	"88"	"15240324.3352661"	"HCD"	"MS2"	"7.394489"	"335.6"	"72.716"	"24.5670"	"5059"	"5059"	"5039"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"519.3"	""	"464.1"	""	"481.6"	""	"538.2"	"7.0"	"627.8"	"539.2"	""	"852"	"37"	"36.000"	"29.000"	"0.00830633799496928"	"18"	"0"	"2.294E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"484.93756"	"1452.79813"	"1452.79863"	"-0.35"	"-0.00017"	"8/64"	"8"	"64"	"533900.743347168"	"HCD"	"MS2"	"43.75378"	"24.2"	"100.000"	"75.0376"	"25513"	"25513"	"25488"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"32.1"	""	"35.3"	""	"34.4"	"0.6"	"44.3"	"45.4"	""	"845"	"30"	"36.000"	"29.000"	"0.0410040461161219"	"28"	"0.002166"	"0.01999"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"726.90277"	"1452.79827"	"1452.79863"	"-0.25"	"-0.00018"	"14/64"	"14"	"64"	"868173.579406738"	"HCD"	"MS2"	"34.03679"	"74.9"	"100.000"	"75.1159"	"25545"	"25545"	"25518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.6"	""	"109.2"	""	"99.1"	""	"106.9"	""	"130.1"	"163.4"	""	"852"	"28"	"36.000"	"29.000"	"0.0692483769949706"	"24"	"0.0001991"	"0.002389"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"726.90295"	"1452.79863"	"1452.79863"	"0.00"	"0.00000"	"7/64"	"7"	"64"	"1010680.77099609"	"HCD"	"MS2"	"11.84555"	"93.9"	"100.000"	"74.7796"	"25408"	"25408"	"25389"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.9"	""	"129.2"	""	"127.1"	""	"129.5"	"1.0"	"162.5"	"191.0"	""	"838"	"39"	"36.000"	"29.000"	"0.00494554346338075"	"25"	"9.9E-05"	"0.0005485"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"726.90308"	"1452.79888"	"1452.79863"	"0.17"	"0.00012"	"7/64"	"7"	"64"	"991668.392333984"	"HCD"	"MS2"	"30.096"	"86.2"	"100.000"	"74.9629"	"25451"	"25451"	"25432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.3"	""	"117.0"	""	"118.1"	""	"114.3"	""	"161.8"	"182.2"	""	"838"	"35"	"36.000"	"29.000"	"0.0143289386413244"	"25"	"0.0001991"	"0.0027"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEEAEK"	"[R].fLEEEAEk.[M]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"726.90320"	"1452.79912"	"1452.79863"	"0.34"	"0.00024"	"14/64"	"14"	"64"	"1013809.85162354"	"HCD"	"MS2"	"6.135823"	"97.1"	"100.000"	"74.6631"	"25330"	"25330"	"25314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.4"	""	"126.8"	""	"137.4"	""	"143.3"	"0.1"	"171.5"	"192.2"	""	"845"	"45"	"36.000"	"29.000"	"0.00129965090422795"	"27"	"9.9E-05"	"0.0005415"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAHLEEER"	"[R].aGVLAHLEEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"484.93829"	"1452.80033"	"1452.80081"	"-0.33"	"-0.00016"	"8/84"	"8"	"84"	"3870091.45715332"	"HCD"	"MS2"	"18.86314"	"69.9"	"100.000"	"63.0414"	"20615"	"20615"	"20593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.0"	""	"86.7"	""	"96.5"	""	"115.1"	"0.0"	"139.7"	"140.1"	""	"837"	"55"	"36.000"	"29.000"	"0.00012696834605853"	"22"	"0"	"4.184E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVLAHLEEER"	"[R].aGVLAHLEEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"Q9JLT0"	"Myosin-10 OS=Rattus norvegicus OX=10116 GN=Myh10 PE=1 SV=1"	"0"	"3"	"3"	"0.8704"	"0.0000"	"1"	"1"	"1"	"484.93842"	"1452.80069"	"1452.80081"	"-0.08"	"-0.00004"	"9/84"	"9"	"84"	"3255406.50140381"	"HCD"	"MS2"	"27.88445"	"54.9"	"100.000"	"62.9637"	"20616"	"20616"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.1"	""	"68.7"	""	"77.5"	""	"99.2"	""	"110.6"	"102.1"	""	"835"	"54"	"36.000"	"29.000"	"0.000161308212920074"	"23"	"0"	"2.141E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPTASVK"	"[R].dYNPTASVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"726.90839"	"1452.80950"	"1452.80987"	"-0.25"	"-0.00018"	"14/88"	"14"	"88"	"421108.164428711"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"51.2904"	"15879"	"15879"	"15862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.3"	""	"51.8"	""	"66.9"	""	"52.3"	""	"85.4"	"88.3"	""	"787"	"32"	"35.000"	"28.000"	"0.0228005192043978"	"16"	"0"	"9.79E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPTASVK"	"[R].dYNPTASVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"726.90857"	"1452.80986"	"1452.80987"	"0.00"	"0.00000"	"13/88"	"13"	"88"	"410216.634765625"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"51.6448"	"15986"	"15986"	"15965"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"59.7"	""	"62.3"	""	"53.1"	""	"77.0"	"79.9"	""	"779"	"34"	"35.000"	"28.000"	"0.0169631874800529"	"20"	"0.0005161"	"0.006962"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPTASVK"	"[R].dYNPTASVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"726.90869"	"1452.81011"	"1452.80987"	"0.17"	"0.00012"	"13/88"	"13"	"88"	"1018087.42779541"	"HCD"	"MS2"	"13.03268"	"91.6"	"100.000"	"50.9877"	"15756"	"15756"	"15734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.7"	""	"116.1"	""	"129.0"	""	"142.7"	"0.5"	"167.1"	"169.3"	""	"779"	"46"	"35.000"	"28.000"	"0.000951716200274301"	"22"	"0"	"3.883E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYNPTASVK"	"[R].dYNPTASVk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"726.90967"	"1452.81206"	"1452.80987"	"1.51"	"0.00110"	"8/88"	"8"	"88"	"1023215.02355957"	"HCD"	"MS2"	"0"	"86.5"	"100.000"	"51.3312"	"15859"	"15859"	"15837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.6"	""	"116.9"	""	"116.1"	""	"134.2"	""	"148.6"	"158.6"	""	"767"	"44"	"35.000"	"28.000"	"0.00146813289062001"	"20"	"0"	"0.0001376"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYETIAAK"	"[R].aQYETIAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"726.92639"	"1452.84551"	"1452.84625"	"-0.51"	"-0.00037"	"8/80"	"8"	"80"	"599986.895202637"	"HCD"	"MS2"	"0"	"61.2"	"100.000"	"56.6421"	"18014"	"18014"	"18001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.9"	""	"125.9"	""	"118.1"	""	"41.7"	"1.1"	"96.8"	"105.0"	""	"648"	"52"	"35.000"	"28.000"	"0.000201161567090541"	"22"	"0"	"2.599E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYETIAAK"	"[R].aQYETIAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"726.92682"	"1452.84636"	"1452.84625"	"0.08"	"0.00006"	"8/80"	"8"	"80"	"433263.543640137"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"55.8774"	"17742"	"17742"	"17725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"88.7"	""	"66.9"	""	"43.8"	"0.7"	"60.4"	"68.8"	""	"631"	"54"	"34.000"	"28.000"	"0.000123594562227506"	"24"	"0"	"4.249E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYETIAAK"	"[R].aQYETIAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.8305"	"0.0000"	"1"	"1"	"1"	"726.92719"	"1452.84709"	"1452.84625"	"0.58"	"0.00042"	"16/80"	"16"	"80"	"652921.098571777"	"HCD"	"MS2"	"0"	"59.4"	"100.000"	"56.3082"	"17915"	"17915"	"17898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.3"	""	"123.6"	""	"108.7"	""	"50.4"	""	"89.4"	"106.9"	""	"637"	"59"	"35.000"	"28.000"	"4.218027789595E-05"	"27"	"0"	"3.14E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYETIAAK"	"[R].aQYETIAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"726.92810"	"1452.84892"	"1452.84625"	"1.84"	"0.00134"	"8/80"	"8"	"80"	"539672.245117188"	"HCD"	"MS2"	"37.72762"	"47.1"	"100.000"	"56.3303"	"17890"	"17890"	"17870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.0"	""	"101.1"	""	"81.7"	""	"37.3"	""	"75.3"	"79.2"	""	"622"	"54"	"34.000"	"27.000"	"0.000120993040093221"	"24"	"0"	"1.041E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTWSGESK"	"[K].nSTWSGESk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"727.38800"	"1453.76872"	"1453.76873"	"0.00"	"0.00000"	"8/92"	"8"	"92"	"2186777.34259033"	"HCD"	"MS2"	"0"	"195.4"	"100.000"	"38.8359"	"10828"	"10828"	"10800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"323.6"	""	"209.5"	""	"227.9"	""	"343.3"	""	"372.0"	"377.5"	""	"816"	"44"	"36.000"	"29.000"	"0.00153341660949685"	"23"	"0"	"0.0002454"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSTWSGESK"	"[K].nSTWSGESk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"727.39063"	"1453.77397"	"1453.76873"	"3.61"	"0.00262"	"8/92"	"8"	"92"	"1841163.42657471"	"HCD"	"MS2"	"0"	"171.4"	"100.000"	"38.8844"	"10812"	"10812"	"10781"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"284.1"	""	"180.2"	""	"193.1"	""	"302.5"	""	"321.0"	"345.4"	""	"812"	"52"	"36.000"	"29.000"	"0.000232020326488778"	"23"	"0"	"0.0002414"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISEQTYQLSR"	"[R].iSEQTYQLSR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"P61765"	"Syntaxin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Stxbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"727.39435"	"1453.78142"	"1453.78482"	"-2.34"	"-0.00170"	"7/98"	"7"	"98"	"337457.598327637"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"55.3986"	"17551"	"17551"	"17522"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.1"	""	"40.6"	""	"37.3"	""	"47.7"	""	"59.0"	"59.0"	""	"860"	"38"	"36.000"	"29.000"	"0.00711981084291897"	"17"	"0.0001686"	"0.001349"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYEAEGIAK"	"[K].dYEAEGIAk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"Q5XIT9"	"Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc2 PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"727.39990"	"1453.79253"	"1453.79388"	"-0.93"	"-0.00068"	"8/72"	"8"	"72"	"444871.087097168"	"HCD"	"MS2"	"36.99572"	"45.8"	"100.000"	"56.5718"	"18021"	"18021"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.5"	""	"72.5"	""	"77.9"	""	"57.3"	""	"81.4"	"79.9"	""	"823"	"38"	"36.000"	"29.000"	"0.00718405815926788"	"23"	"0"	"3.241E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPLLGPPESMR"	"[R].qPLLGPPESMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"727.40491"	"1453.80254"	"1453.80345"	"-0.63"	"-0.00046"	"11/102"	"11"	"102"	"344218.955505371"	"HCD"	"MS2"	"41.33178"	"22.7"	"100.000"	"72.8665"	"24630"	"24630"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.0"	""	"29.7"	""	"33.2"	""	"31.4"	""	"46.8"	"42.6"	""	"800"	"9"	"36.000"	"29.000"	"4.52960145294223"	"15"	"0.000885"	"0.00777"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPLLGPPESMR"	"[R].qPLLGPPESMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"727.40601"	"1453.80474"	"1453.80345"	"0.88"	"0.00064"	"8/102"	"8"	"102"	"325727.079223633"	"HCD"	"MS2"	"9.898884"	"18.1"	"100.000"	"72.7361"	"24547"	"24547"	"24523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.1"	""	"24.5"	""	"26.0"	""	"21.9"	"1.6"	"37.5"	"33.5"	""	"815"	"30"	"36.000"	"29.000"	"0.0374220533067059"	"16"	"9.9E-05"	"0.0004485"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIHSADIIHR"	"[K].yIHSADIIHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"364.20795"	"1453.80996"	"1453.81131"	"-0.93"	"-0.00034"	"12/76"	"12"	"76"	"1839541.73455811"	"HCD"	"MS2"	"2.76318"	"37.9"	"100.000"	"40.4779"	"11456"	"11456"	"11437"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.4"	""	"47.6"	""	"57.9"	""	"58.3"	"1.0"	"68.0"	"77.2"	""	"776"	"45"	"35.000"	"28.000"	"0.00116904633738421"	"15"	"9.9E-05"	"0.0005554"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIHSADIIHR"	"[K].yIHSADIIHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"P70618"	"Mitogen-activated protein kinase 14 OS=Rattus norvegicus OX=10116 GN=Mapk14 PE=1 SV=3"	"0"	"4"	"4"	"0.8857"	"0.0000"	"1"	"1"	"1"	"364.20828"	"1453.81130"	"1453.81131"	"-0.01"	"0.00000"	"11/76"	"11"	"76"	"1940336.10809326"	"HCD"	"MS2"	"8.706805"	"35.9"	"100.000"	"40.4053"	"11461"	"11461"	"11434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.5"	""	"53.2"	""	"49.8"	""	"61.6"	"0.9"	"61.9"	"67.1"	""	"781"	"35"	"35.000"	"28.000"	"0.0124342913223405"	"19"	"0.0001686"	"0.001642"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"485.28076"	"1453.82773"	"1453.83027"	"-1.74"	"-0.00084"	"6/70"	"6"	"70"	"975696.29901123"	"HCD"	"MS2"	"42.46411"	"37.8"	"100.000"	"67.0936"	"22290"	"22290"	"22270"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.9"	""	"51.4"	""	"55.6"	""	"64.4"	"2.1"	"66.2"	"68.3"	""	"701"	"40"	"35.000"	"28.000"	"0.00336269921346335"	"24"	"0"	"0.0002156"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"727.41827"	"1453.82927"	"1453.83027"	"-0.68"	"-0.00050"	"8/70"	"8"	"70"	"2966696.45263672"	"HCD"	"MS2"	"0"	"231.0"	"100.000"	"67.3724"	"22403"	"22403"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"282.7"	""	"283.9"	""	"352.4"	""	"392.8"	""	"469.8"	"411.9"	""	"710"	"54"	"35.000"	"28.000"	"0.000138748518006303"	""	"0"	"0.0001306"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"485.28128"	"1453.82929"	"1453.83027"	"-0.67"	"-0.00033"	"7/70"	"7"	"70"	"1221673.96246338"	"HCD"	"MS2"	"32.7185"	"46.4"	"100.000"	"67.3852"	"22377"	"22377"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.6"	""	"61.7"	""	"65.0"	""	"78.6"	""	"93.2"	"79.7"	""	"710"	"45"	"35.000"	"28.000"	"0.00116205946681988"	"28"	"0"	"0.000323"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"485.28128"	"1453.82929"	"1453.83027"	"-0.67"	"-0.00033"	"6/70"	"6"	"70"	"1071137.88214111"	"HCD"	"MS2"	"26.88826"	"39.6"	"100.000"	"67.0673"	"22248"	"22248"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	""	"46.8"	""	"60.2"	""	"57.8"	"0.1"	"83.5"	"71.7"	""	"710"	"43"	"35.000"	"28.000"	"0.00167582379648575"	"27"	"0"	"0.0001752"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"485.28128"	"1453.82929"	"1453.83027"	"-0.67"	"-0.00033"	"7/70"	"7"	"70"	"981399.83807373"	"HCD"	"MS2"	"10.61169"	"34.6"	"100.000"	"67.4254"	"22425"	"22425"	"22400"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.1"	""	"38.7"	""	"53.3"	""	"58.8"	""	"76.2"	"61.4"	""	"710"	"27"	"35.000"	"28.000"	"0.0670236928929184"	"20"	"0.0001991"	"0.003429"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"727.41876"	"1453.83025"	"1453.83027"	"-0.01"	"-0.00001"	"14/70"	"14"	"70"	"1768492.13183594"	"HCD"	"MS2"	"41.1512"	"138.7"	"100.000"	"67.0522"	"22273"	"22273"	"22258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"173.1"	""	"183.6"	""	"203.1"	""	"225.9"	""	"285.7"	"245.6"	""	"695"	"41"	"35.000"	"28.000"	"0.00247146695994532"	"23"	"0"	"7.324E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"727.41882"	"1453.83037"	"1453.83027"	"0.07"	"0.00005"	"8/70"	"8"	"70"	"2063151.52563477"	"HCD"	"MS2"	"37.86033"	"169.4"	"100.000"	"67.0491"	"22241"	"22241"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"218.2"	"3.1"	"221.4"	""	"255.8"	""	"299.6"	""	"328.1"	"279.8"	""	"695"	"53"	"35.000"	"28.000"	"0.000162164134659215"	""	"0"	"2.231E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALTGDEVK"	"[K].yALTGDEVk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"P62703"	"40S ribosomal protein S4, X isoform OS=Rattus norvegicus OX=10116 GN=Rps4x PE=2 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"727.41980"	"1453.83232"	"1453.83027"	"1.41"	"0.00103"	"8/70"	"8"	"70"	"2890413.39440918"	"HCD"	"MS2"	"0"	"221.4"	"100.000"	"67.3460"	"22361"	"22361"	"22343"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.3"	""	"284.2"	""	"337.1"	""	"360.3"	"1.2"	"451.5"	"404.0"	""	"703"	"54"	"35.000"	"28.000"	"0.000146867373876288"	""	"0"	"5.4E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQLIPDQLR"	"[K].eLQLIPDQLR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"O08658"	"Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1"	"O08658"	"Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.43170"	"1453.85613"	"1453.85759"	"-1.01"	"-0.00073"	"5/98"	"5"	"98"	"88144.7190551758"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"107.3919"	"38523"	"38523"	"38512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.0"	""	"3.7"	""	"7.0"	""	"8.8"	""	"11.7"	"11.2"	""	"562"	"11"	"34.000"	"27.000"	"2.35888256211951"	"13"	"0.002419"	"0.02288"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDTDSWMR"	"[K].lSVDTDSWmR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"727.86090"	"1454.71453"	"1454.71470"	"-0.12"	"-0.00009"	"8/82"	"8"	"82"	"529529.321716309"	"HCD"	"MS2"	"3.583499"	"25.9"	"100.000"	"81.3549"	"28044"	"28044"	"28027"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.3"	""	"28.7"	""	"29.4"	""	"60.6"	"2.4"	"45.6"	"44.6"	""	"579"	"51"	"34.000"	"27.000"	"0.000228375004050571"	"20"	"9.9E-05"	"0.0005732"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSVDTDSWMR"	"[K].lSVDTDSWmR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"727.86121"	"1454.71514"	"1454.71470"	"0.30"	"0.00022"	"7/82"	"7"	"82"	"523774.274719238"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"81.4216"	"28098"	"28098"	"28080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.1"	""	"29.3"	""	"22.3"	""	"65.5"	"1.2"	"39.3"	"46.0"	""	"594"	"43"	"34.000"	"27.000"	"0.00154083611561901"	"20"	"0.0001686"	"0.001383"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIYMWDVEGR"	"[K].gIYMWDVEGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.86829"	"1454.72930"	"1454.72995"	"-0.45"	"-0.00033"	"6/76"	"6"	"76"	"180795.930969238"	"HCD"	"MS2"	"29.78905"	"12.1"	"100.000"	"104.7034"	"37459"	"37459"	"37449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.1"	""	"16.2"	""	"17.8"	""	"17.6"	""	"21.0"	"24.7"	""	"651"	"16"	"35.000"	"28.000"	"0.846351937810296"	"13"	"0.001453"	"0.01186"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIYMWDVEGR"	"[K].gIYMWDVEGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"P04182"	"Ornithine aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oat PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.86957"	"1454.73186"	"1454.72995"	"1.31"	"0.00095"	"6/76"	"6"	"76"	"188615.954284668"	"HCD"	"MS2"	"15.15175"	"14.0"	"100.000"	"104.9756"	"37586"	"37586"	"37574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"21.3"	""	"20.6"	""	"17.2"	""	"21.3"	"30.0"	""	"664"	"18"	"35.000"	"28.000"	"0.488807750807663"	"14"	"0.001615"	"0.01476"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87726"	"1454.74724"	"1454.74771"	"-0.32"	"-0.00023"	"8/96"	"8"	"96"	"469715.554138184"	"HCD"	"MS2"	"19.56535"	"29.1"	"100.000"	"40.1798"	"11369"	"11369"	"11341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"37.3"	""	"38.7"	""	"55.2"	""	"54.7"	"57.4"	""	"726"	"25"	"35.000"	"28.000"	"0.127616439911772"	"14"	"0.00212"	"0.01889"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87762"	"1454.74797"	"1454.74771"	"0.18"	"0.00013"	"7/96"	"7"	"96"	"276191.143432617"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"39.7434"	"11192"	"11192"	"11169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"27.6"	""	"24.9"	""	"24.6"	""	"36.1"	"36.5"	""	"719"	"19"	"35.000"	"28.000"	"0.406161631324871"	"14"	"0.001718"	"0.01497"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87793"	"1454.74858"	"1454.74771"	"0.60"	"0.00044"	"8/96"	"8"	"96"	"290438.014892578"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"40.5629"	"11490"	"11490"	"11470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"25.1"	""	"25.0"	""	"39.7"	""	"36.1"	"32.9"	""	"721"	"23"	"35.000"	"28.000"	"0.182349790652123"	"14"	"0.0009352"	"0.008404"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87793"	"1454.74858"	"1454.74771"	"0.60"	"0.00044"	"8/96"	"8"	"96"	"289079.063842773"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"40.5156"	"11506"	"11506"	"11479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"19.5"	""	"26.2"	""	"23.0"	""	"25.8"	"37.6"	""	"721"	"29"	"35.000"	"28.000"	"0.0452798801912002"	"15"	"0.0005778"	"0.007117"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STYPPSGPTYR"	"[K].sTYPPSGPTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"Q6P7S1"	"Acid ceramidase OS=Rattus norvegicus OX=10116 GN=Asah1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.87817"	"1454.74907"	"1454.74771"	"0.94"	"0.00068"	"9/96"	"9"	"96"	"304067.203979492"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"39.8918"	"11218"	"11218"	"11194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.7"	""	"24.9"	""	"26.0"	""	"30.9"	""	"31.4"	"38.4"	""	"711"	"36"	"35.000"	"28.000"	"0.00999630745206824"	"15"	"0.0001686"	"0.001147"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.59027"	"1454.75626"	"1454.75894"	"-1.84"	"-0.00089"	"11/116"	"11"	"116"	"987732.148376465"	"HCD"	"MS2"	"33.37487"	"38.6"	"100.000"	"50.3944"	"15515"	"15515"	"15492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.0"	""	"51.5"	""	"52.2"	""	"58.3"	""	"79.2"	"73.9"	""	"757"	"18"	"35.000"	"28.000"	"0.633965878576006"	"14"	"0.0001686"	"0.001172"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"727.88293"	"1454.75859"	"1454.75894"	"-0.24"	"-0.00018"	"8/116"	"8"	"116"	"1181838.0368042"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"49.9432"	"15331"	"15331"	"15308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.0"	""	"79.1"	""	"81.8"	""	"84.2"	""	"89.6"	"88.9"	""	"786"	"56"	"35.000"	"28.000"	"9.36251551457966E-05"	"23"	"0"	"2.129E-06"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"727.88300"	"1454.75871"	"1454.75894"	"-0.16"	"-0.00011"	"9/116"	"9"	"116"	"1996356.95074463"	"HCD"	"MS2"	"0"	"91.7"	"100.000"	"50.5866"	"15559"	"15559"	"15542"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.9"	""	"142.0"	""	"131.7"	""	"141.8"	""	"146.5"	"154.7"	""	"786"	"63"	"35.000"	"28.000"	"1.85948444771862E-05"	"23"	"0"	"1.545E-07"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"727.88300"	"1454.75871"	"1454.75894"	"-0.16"	"-0.00011"	"12/116"	"12"	"116"	"2069661.01940918"	"HCD"	"MS2"	"0"	"92.1"	"100.000"	"50.2333"	"15449"	"15449"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.4"	""	"126.5"	""	"143.8"	""	"131.9"	"0.7"	"148.8"	"161.6"	""	"786"	"64"	"35.000"	"28.000"	"1.72739854867065E-05"	"26"	"0"	"3.999E-08"	"1.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEFGPPGPGPGSR"	"[R].aEFGPPGPGPGSR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"727.88306"	"1454.75884"	"1454.75894"	"-0.07"	"-0.00005"	"12/116"	"12"	"116"	"1678539.12445068"	"HCD"	"MS2"	"0"	"78.8"	"100.000"	"50.2987"	"15441"	"15441"	"15414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.9"	""	"109.7"	""	"111.8"	""	"124.7"	"0.6"	"120.3"	"135.3"	""	"786"	"66"	"35.000"	"28.000"	"9.36251551457964E-06"	"27"	"0"	"2.761E-08"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.88684"	"1454.76641"	"1454.76884"	"-1.67"	"-0.00122"	"6/92"	"6"	"92"	"172552.332946777"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"79.6884"	"27395"	"27395"	"27366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"18.6"	""	"19.5"	""	"29.0"	""	"26.2"	"34.1"	""	"792"	"15"	"35.000"	"28.000"	"1.17407323025164"	"13"	"0.003317"	"0.03698"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAPDADELPR"	"[K].lEAPDADELPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"727.88782"	"1454.76836"	"1454.76884"	"-0.33"	"-0.00024"	"7/92"	"7"	"92"	"257070.365905762"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"79.3336"	"27223"	"27223"	"27201"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.1"	""	"16.1"	""	"23.7"	""	"26.7"	""	"37.8"	"36.4"	""	"801"	"30"	"36.000"	"29.000"	"0.0360248781402779"	"15"	"0.0001991"	"0.002401"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVSSSSGGYVGGR"	"[R].iVSSSSGGYVGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"727.89301"	"1454.77873"	"1454.78007"	"-0.92"	"-0.00067"	"12/102"	"12"	"102"	"1769695.7744751"	"HCD"	"MS2"	"0"	"97.2"	"100.000"	"44.8364"	"13259"	"13259"	"13239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.2"	""	"125.7"	""	"121.6"	""	"180.9"	"1.0"	"188.8"	"202.1"	""	"789"	"60"	"35.000"	"28.000"	"3.52409013332785E-05"	"23"	"0"	"1.361E-08"	"1.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVSSSSGGYVGGR"	"[R].iVSSSSGGYVGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"727.89355"	"1454.77983"	"1454.78007"	"-0.16"	"-0.00012"	"12/102"	"12"	"102"	"327700.877868652"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"45.1579"	"13391"	"13391"	"13360"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.6"	""	"24.1"	""	"40.9"	""	"49.6"	""	"62.2"	"60.4"	""	"786"	"8"	"35.000"	"28.000"	"6.90863980285766"	"15"	"0.008926"	"0.1158"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVSSSSGGYVGGR"	"[R].iVSSSSGGYVGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"727.89386"	"1454.78044"	"1454.78007"	"0.25"	"0.00019"	"12/102"	"12"	"102"	"1414662.62219238"	"HCD"	"MS2"	"0"	"80.6"	"100.000"	"45.0375"	"13307"	"13307"	"13287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.6"	""	"97.8"	""	"102.1"	""	"161.2"	"1.3"	"146.2"	"168.8"	""	"775"	"62"	"35.000"	"28.000"	"2.58387623070279E-05"	"21"	"0"	"6.048E-08"	"1.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVSSSSGGYVGGR"	"[R].iVSSSSGGYVGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"727.89392"	"1454.78057"	"1454.78007"	"0.34"	"0.00025"	"16/102"	"16"	"102"	"363546.669616699"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"45.3455"	"13433"	"13433"	"13410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"29.1"	""	"37.7"	""	"46.3"	"0.7"	"58.8"	"62.9"	""	"775"	"28"	"35.000"	"28.000"	"0.0565290525856697"	"21"	"0.0001686"	"0.001959"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSASASMAK"	"[R].lDSASASmAk.[Y]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"727.89789"	"1454.78850"	"1454.79250"	"-2.75"	"-0.00200"	"8/82"	"8"	"82"	"385338.739685059"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"41.2889"	"11781"	"11781"	"11758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"38.1"	""	"45.3"	""	"69.8"	"1.7"	"59.7"	"66.8"	""	"779"	"15"	"35.000"	"28.000"	"1.25749846040707"	"20"	"0.001872"	"0.0158"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"727.89789"	"1454.78850"	"1454.78913"	"-0.43"	"-0.00032"	"6/78"	"6"	"78"	"907984.09185791"	"HCD"	"MS2"	"11.45146"	"90.0"	"100.000"	"48.0213"	"14514"	"14514"	"14493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.6"	""	"53.8"	""	"75.9"	""	"280.0"	"0.5"	"191.0"	"171.8"	""	"779"	"9"	"35.000"	"28.000"	"5.42634574747194"	"17"	"0.001348"	"0.0111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"485.60110"	"1454.78876"	"1454.78913"	"-0.25"	"-0.00012"	"9/78"	"9"	"78"	"3410604.15863037"	"HCD"	"MS2"	"27.61727"	"111.5"	"100.000"	"47.7727"	"14413"	"14413"	"14390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.1"	""	"88.7"	""	"118.6"	""	"211.0"	""	"235.4"	"265.2"	""	"786"	"33"	"35.000"	"28.000"	"0.0185948444771862"	"27"	"0.0001991"	"0.005835"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"485.60117"	"1454.78894"	"1454.78913"	"-0.13"	"-0.00006"	"9/78"	"9"	"78"	"2814834.60443115"	"HCD"	"MS2"	"27.31818"	"96.5"	"100.000"	"47.3976"	"14298"	"14298"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.3"	""	"78.1"	""	"105.6"	""	"192.8"	""	"199.9"	"223.9"	""	"768"	"30"	"35.000"	"28.000"	"0.0415270637298408"	"25"	"0.0001991"	"0.004361"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"727.89813"	"1454.78899"	"1454.78913"	"-0.10"	"-0.00007"	"8/78"	"8"	"78"	"826186.493347168"	"HCD"	"MS2"	"4.292787"	"80.7"	"100.000"	"47.7012"	"14422"	"14422"	"14394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.8"	""	"59.7"	""	"61.8"	""	"253.4"	""	"167.2"	"160.5"	""	"768"	"27"	"35.000"	"28.000"	"0.0817205393657361"	"24"	"9.9E-05"	"0.0009142"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"727.89838"	"1454.78948"	"1454.78913"	"0.24"	"0.00017"	"14/78"	"14"	"78"	"1720373.45739746"	"HCD"	"MS2"	"4.0804"	"154.8"	"100.000"	"47.3861"	"14293"	"14293"	"14277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.5"	""	"126.3"	""	"141.4"	""	"382.5"	""	"299.6"	"360.6"	""	"767"	"46"	"35.000"	"28.000"	"0.00106602003818569"	"19"	"0"	"0.0001674"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDAAYTNK"	"[K].dVDAAYTNk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"727.89874"	"1454.79021"	"1454.78913"	"0.74"	"0.00054"	"8/78"	"8"	"78"	"1689476.01324463"	"HCD"	"MS2"	"0"	"150.6"	"100.000"	"47.7289"	"14395"	"14395"	"14374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.0"	""	"108.7"	""	"144.7"	""	"342.6"	"2.6"	"302.1"	"358.9"	""	"772"	"52"	"35.000"	"28.000"	"0.000270761745190109"	"18"	"0"	"4.143E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDSASASMAK"	"[R].lDSASASmAk.[Y]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.89990"	"1454.79253"	"1454.79250"	"0.02"	"0.00001"	"15/82"	"15"	"82"	"382333.091918945"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"41.1516"	"11763"	"11763"	"11739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.5"	""	"36.3"	""	"44.9"	""	"64.3"	""	"63.7"	"62.2"	""	"779"	"13"	"35.000"	"28.000"	"2.14539597749904"	"14"	"0.001348"	"0.01135"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"485.60294"	"1454.79425"	"1454.79533"	"-0.74"	"-0.00036"	"11/98"	"11"	"98"	"858036.995483398"	"HCD"	"MS2"	"51.23064"	"21.0"	"100.000"	"67.6234"	"22505"	"22505"	"22483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.4"	""	"27.4"	""	"30.8"	""	"30.4"	"0.7"	"43.1"	"38.5"	""	"763"	"20"	"35.000"	"28.000"	"0.344742274225058"	"17"	"0.0001686"	"0.00109"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"485.60300"	"1454.79444"	"1454.79533"	"-0.61"	"-0.00030"	"11/98"	"11"	"98"	"853710.850402832"	"HCD"	"MS2"	"37.17879"	"20.4"	"100.000"	"67.6016"	"22465"	"22465"	"22441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"23.9"	""	"27.9"	""	"37.9"	""	"36.0"	"39.6"	""	"763"	"21"	"35.000"	"28.000"	"0.323217258494637"	"16"	"0.0001686"	"0.001038"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"727.90100"	"1454.79473"	"1454.79533"	"-0.41"	"-0.00030"	"8/98"	"8"	"98"	"1629380.14904785"	"HCD"	"MS2"	"33.98026"	"105.4"	"100.000"	"67.6419"	"22512"	"22512"	"22495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.5"	""	"117.5"	""	"144.2"	""	"162.0"	""	"229.5"	"213.0"	""	"765"	"37"	"35.000"	"28.000"	"0.00713890231744261"	"20"	"0"	"2.229E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"727.90118"	"1454.79509"	"1454.79533"	"-0.16"	"-0.00012"	"8/98"	"8"	"98"	"641855.817260742"	"HCD"	"MS2"	"7.270076"	"39.2"	"100.000"	"67.8803"	"22577"	"22577"	"22564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.8"	""	"50.7"	""	"50.8"	""	"56.7"	""	"79.5"	"82.6"	""	"767"	"49"	"35.000"	"28.000"	"0.000472895703543286"	"19"	"0"	"7.304E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"727.90118"	"1454.79509"	"1454.79533"	"-0.16"	"-0.00012"	"7/98"	"7"	"98"	"586851.662353516"	"HCD"	"MS2"	"5.486448"	"36.4"	"100.000"	"67.9346"	"22631"	"22631"	"22611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.9"	""	"50.2"	""	"45.6"	""	"60.6"	""	"67.2"	"69.1"	""	"767"	"37"	"35.000"	"28.000"	"0.00685117984955762"	"17"	"0"	"0.0002385"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPWVSVQPR"	"[K].eQPWVSVQPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"727.90143"	"1454.79558"	"1454.79533"	"0.17"	"0.00013"	"8/98"	"8"	"98"	"1649963.72271729"	"HCD"	"MS2"	"34.9483"	"107.9"	"100.000"	"67.5835"	"22457"	"22457"	"22441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.1"	""	"127.9"	""	"149.5"	""	"176.7"	""	"213.0"	"211.4"	""	"761"	"38"	"35.000"	"28.000"	"0.00643212774490261"	"18"	"0"	"3.06E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"727.91626"	"1454.82524"	"1454.82769"	"-1.68"	"-0.00122"	"17/104"	"17"	"104"	"874418.65246582"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"41.4360"	"11875"	"11875"	"11846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.0"	""	"53.0"	""	"56.9"	""	"50.6"	""	"58.3"	"70.2"	""	"616"	"40"	"34.000"	"27.000"	"0.00329268902800578"	"16"	"9.9E-05"	"0.0007721"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"727.91632"	"1454.82536"	"1454.82769"	"-1.60"	"-0.00116"	"10/104"	"10"	"104"	"2070776.79418945"	"HCD"	"MS2"	"0"	"76.0"	"100.000"	"41.6274"	"11918"	"11918"	"11890"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.0"	""	"108.4"	""	"115.7"	""	"111.9"	""	"132.1"	"129.3"	""	"612"	"46"	"34.000"	"27.000"	"0.000835067201539261"	"19"	"0"	"5.669E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"727.91742"	"1454.82756"	"1454.82769"	"-0.09"	"-0.00006"	"5/104"	"5"	"104"	"709328.732055664"	"HCD"	"MS2"	"49.41913"	"62.3"	"100.000"	"42.1177"	"12118"	"12118"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.5"	""	"69.9"	""	"75.7"	""	"111.9"	""	"124.7"	"123.4"	""	"611"	"9"	"34.000"	"27.000"	"3.95376829562971"	"13"	"0.007104"	"0.09116"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"727.91754"	"1454.82781"	"1454.82769"	"0.08"	"0.00006"	"11/104"	"11"	"104"	"3059860.66040039"	"HCD"	"MS2"	"0"	"131.8"	"100.000"	"41.7630"	"12007"	"12007"	"11987"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.6"	""	"166.0"	""	"207.2"	""	"202.5"	""	"235.9"	"228.3"	""	"598"	"51"	"34.000"	"27.000"	"0.000244158129036219"	"17"	"0"	"1.648E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLANPGNSQVAR"	"[R].vLANPGNSQVAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"P52296"	"Importin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Kpnb1 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"727.91766"	"1454.82805"	"1454.82769"	"0.25"	"0.00018"	"9/104"	"9"	"104"	"1894677.31506348"	"HCD"	"MS2"	"4.470337"	"98.4"	"100.000"	"41.9477"	"12048"	"12048"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.1"	""	"129.0"	""	"139.0"	""	"162.3"	""	"193.7"	"173.7"	""	"598"	"41"	"34.000"	"27.000"	"0.00241363274044402"	"17"	"0"	"2.426E-07"	"1.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMAEIYK"	"[K].eIMAEIYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"2"	"2"	"0.8222"	"0.0000"	"1"	"1"	"1"	"727.91925"	"1454.83122"	"1454.83291"	"-1.16"	"-0.00084"	"7/64"	"7"	"64"	"208354.992492676"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"98.7597"	"35062"	"35062"	"35037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"25.2"	""	"24.7"	""	"28.5"	""	"38.3"	"37.4"	""	"586"	"45"	"34.000"	"27.000"	"0.000856776646708097"	"23"	"0"	"0.0001226"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMAEIYK"	"[K].eIMAEIYk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"727.91943"	"1454.83159"	"1454.83291"	"-0.91"	"-0.00066"	"12/64"	"12"	"64"	"202556.301086426"	"HCD"	"MS2"	"17.38941"	"19.0"	"100.000"	"98.8272"	"35119"	"35119"	"35094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"23.3"	""	"29.3"	""	"23.6"	""	"42.6"	"41.3"	""	"587"	"38"	"34.000"	"27.000"	"0.00433119867516475"	""	"9.9E-05"	"0.0007433"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"727.93005"	"1454.85283"	"1454.85284"	"-0.01"	"-0.00001"	"11/106"	"11"	"106"	"700506.50177002"	"HCD"	"MS2"	"62.28603"	"32.2"	"100.000"	"96.6249"	"34229"	"34229"	"34209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.1"	""	"40.1"	""	"51.2"	""	"63.1"	"1.1"	"54.6"	"53.5"	""	"536"	"12"	"34.000"	"27.000"	"1.65247460498877"	"13"	"0.0001991"	"0.004638"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"727.93005"	"1454.85283"	"1454.85284"	"-0.01"	"-0.00001"	"11/106"	"11"	"106"	"700506.50177002"	"HCD"	"MS2"	"62.28603"	"32.2"	"100.000"	"96.6249"	"34229"	"34229"	"34209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.1"	""	"40.1"	""	"51.2"	""	"63.1"	"1.1"	"54.6"	"53.5"	""	"536"	"12"	"34.000"	"27.000"	"1.65247460498877"	"13"	"0.0001991"	"0.004638"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"727.93005"	"1454.85283"	"1454.85284"	"-0.01"	"-0.00001"	"16/106"	"16"	"106"	"1195736.56072998"	"HCD"	"MS2"	"48.38103"	"45.7"	"100.000"	"96.6224"	"34197"	"34197"	"34180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.4"	""	"59.0"	""	"74.9"	""	"65.5"	""	"89.5"	"80.6"	""	"536"	"25"	"34.000"	"27.000"	"0.0818718858341758"	"17"	"0"	"0.0002561"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"727.93005"	"1454.85283"	"1454.85284"	"-0.01"	"-0.00001"	"16/106"	"16"	"106"	"1195736.56072998"	"HCD"	"MS2"	"48.38103"	"45.7"	"100.000"	"96.6224"	"34197"	"34197"	"34180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.4"	""	"59.0"	""	"74.9"	""	"65.5"	""	"89.5"	"80.6"	""	"536"	"25"	"34.000"	"27.000"	"0.0818718858341758"	"17"	"0"	"0.0002561"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"727.93018"	"1454.85307"	"1454.85284"	"0.16"	"0.00012"	"9/106"	"9"	"106"	"1117449.14569092"	"HCD"	"MS2"	"66.90662"	"44.4"	"100.000"	"96.6480"	"34238"	"34238"	"34220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"57.1"	""	"64.8"	""	"82.6"	""	"79.9"	"82.3"	""	"528"	"28"	"34.000"	"27.000"	"0.0396829479047766"	"14"	"0"	"7.2E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"727.93018"	"1454.85307"	"1454.85284"	"0.16"	"0.00012"	"9/106"	"9"	"106"	"1117449.14569092"	"HCD"	"MS2"	"66.90662"	"44.4"	"100.000"	"96.6480"	"34238"	"34238"	"34220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"57.1"	""	"64.8"	""	"82.6"	""	"79.9"	"82.3"	""	"528"	"28"	"34.000"	"27.000"	"0.0396829479047766"	"14"	"0"	"7.2E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELIHELK"	"[K].dELIHELk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"485.62500"	"1454.86045"	"1454.86190"	"-1.00"	"-0.00048"	"6/66"	"6"	"66"	"908239.252746582"	"HCD"	"MS2"	"37.03916"	"35.7"	"100.000"	"73.6768"	"24931"	"24931"	"24905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.2"	""	"44.6"	""	"39.6"	""	"61.2"	""	"79.5"	"73.5"	""	"527"	"36"	"34.000"	"27.000"	"0.00722404794302997"	"23"	"9.9E-05"	"0.0007607"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELIHELK"	"[K].dELIHELk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"485.62537"	"1454.86155"	"1454.86190"	"-0.24"	"-0.00012"	"7/66"	"7"	"66"	"842816.583129883"	"HCD"	"MS2"	"49.56537"	"36.6"	"100.000"	"73.7470"	"24989"	"24989"	"24960"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"36.0"	""	"44.8"	""	"62.5"	"1.0"	"82.7"	"74.9"	""	"516"	"14"	"34.000"	"27.000"	"1.09551847498149"	"16"	"0.001217"	"0.0094"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYSSEPNNLR"	"[K].fYSSEPNNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"728.37280"	"1455.73833"	"1455.74296"	"-3.18"	"-0.00231"	"6/82"	"6"	"82"	"437366.931640625"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"54.8539"	"17328"	"17328"	"17306"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.3"	""	"40.7"	""	"41.1"	""	"67.0"	"0.8"	"66.7"	"59.7"	""	"651"	"23"	"35.000"	"28.000"	"0.156153237531242"	"20"	"0.0001991"	"0.005233"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYSSEPNNLR"	"[K].fYSSEPNNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"728.37347"	"1455.73967"	"1455.74296"	"-2.26"	"-0.00164"	"6/82"	"6"	"82"	"324287.950195313"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"55.4887"	"17553"	"17553"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"36.5"	""	"33.7"	""	"50.7"	"0.4"	"59.9"	"53.0"	""	"659"	"20"	"35.000"	"28.000"	"0.34029488319838"	"21"	"0.001348"	"0.01064"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYSSEPNNLR"	"[K].fYSSEPNNLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"Q5FVG2"	"Band 4.1-like protein 5 OS=Rattus norvegicus OX=10116 GN=Epb41l5 PE=2 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"3"	"728.37390"	"1455.74053"	"1455.74296"	"-1.67"	"-0.00122"	"5/82"	"5"	"82"	"278269.375915527"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"55.1644"	"17455"	"17455"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"32.9"	""	"32.2"	""	"50.1"	""	"55.4"	"43.0"	""	"671"	"8"	"35.000"	"28.000"	"5.87073564033572"	"16"	"0.005152"	"0.06594"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGWLHTGDIGR"	"[K].dGWLHTGDIGR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"485.92218"	"1455.75199"	"1455.75419"	"-1.51"	"-0.00073"	"6/94"	"6"	"94"	"1358953.54986572"	"HCD"	"MS2"	"36.52343"	"30.6"	"100.000"	"62.0675"	"20252"	"20252"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.9"	""	"36.5"	""	"43.9"	""	"45.6"	"1.3"	"59.0"	"53.6"	""	"722"	"22"	"35.000"	"28.000"	"0.25439419789714"	"19"	"9.9E-05"	"0.0008258"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGWLHTGDIGR"	"[K].dGWLHTGDIGR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"O88813"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.92258"	"1455.75318"	"1455.75419"	"-0.70"	"-0.00034"	"9/94"	"9"	"94"	"953172.422729492"	"HCD"	"MS2"	"21.92077"	"26.4"	"100.000"	"62.0714"	"20220"	"20220"	"20199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"33.1"	""	"40.3"	""	"38.8"	"0.3"	"49.1"	"52.0"	""	"718"	"10"	"35.000"	"28.000"	"3.63994187479468"	"13"	"0.004852"	"0.06024"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYLDSSEMR"	"[R].iLYLDSSEMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"728.38879"	"1455.77031"	"1455.77148"	"-0.80"	"-0.00059"	"8/78"	"8"	"78"	"305640.240661621"	"HCD"	"MS2"	"27.55854"	"18.4"	"100.000"	"101.4939"	"36170"	"36170"	"36150"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"27.7"	""	"18.8"	""	"21.8"	"0.8"	"36.7"	"40.9"	""	"755"	"28"	"35.000"	"28.000"	"0.0609420355201998"	"18"	"0"	"0.0003428"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYLDSSEMR"	"[R].iLYLDSSEMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"728.38885"	"1455.77043"	"1455.77148"	"-0.72"	"-0.00052"	"5/78"	"5"	"78"	"120028.338439941"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"101.9041"	"36361"	"36361"	"36348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"12.2"	""	"12.5"	""	"11.7"	""	"17.1"	"20.8"	""	"755"	"30"	"35.000"	"28.000"	"0.0349073560661679"	"18"	"0.0001991"	"0.002555"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILYLDSSEMR"	"[R].iLYLDSSEMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"Q9Z1X1"	"Extended synaptotagmin-1 OS=Rattus norvegicus OX=10116 GN=Esyt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"728.38922"	"1455.77117"	"1455.77148"	"-0.22"	"-0.00016"	"5/78"	"5"	"78"	"275145.671691895"	"HCD"	"MS2"	"21.76186"	"16.0"	"100.000"	"101.6276"	"36250"	"36250"	"36224"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.1"	""	"18.9"	""	"20.6"	""	"26.9"	""	"26.1"	"35.4"	""	"757"	"27"	"35.000"	"28.000"	"0.0711321415160037"	"17"	"0.0001991"	"0.005234"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGMSAFVEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"485.93472"	"1455.78962"	"1455.79177"	"-1.48"	"-0.00072"	"9/78"	"9"	"78"	"445755.275878906"	"HCD"	"MS2"	"25.73845"	"20.9"	"100.000"	"80.6673"	"27793"	"27793"	"27764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"27.0"	""	"34.4"	""	"25.7"	""	"34.5"	"44.9"	""	"774"	"18"	"35.000"	"28.000"	"0.636371856884178"	"27"	"0.0001991"	"0.003946"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGMSAFVEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"728.39874"	"1455.79021"	"1455.79177"	"-1.07"	"-0.00078"	"7/78"	"7"	"78"	"297291.520812988"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"80.4948"	"27695"	"27695"	"27673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.8"	""	"47.9"	""	"39.7"	""	"35.1"	"0.7"	"47.9"	"54.8"	""	"785"	"27"	"35.000"	"28.000"	"0.0730869201140176"	"16"	"0.0001686"	"0.001292"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGMSAFVEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"728.39960"	"1455.79192"	"1455.79177"	"0.10"	"0.00007"	"8/78"	"8"	"78"	"421336.903808594"	"HCD"	"MS2"	"14.84547"	"40.5"	"100.000"	"80.8037"	"27821"	"27821"	"27798"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.3"	""	"56.7"	""	"63.8"	""	"34.6"	""	"70.2"	"86.1"	""	"780"	"54"	"35.000"	"28.000"	"0.000157059643386929"	""	"0"	"1.887E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGMSAFVEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.2632"	"0.0000"	"1"	"1"	"1"	"485.93561"	"1455.79227"	"1455.79177"	"0.34"	"0.00017"	"4/78"	"4"	"78"	"437318.264160156"	"HCD"	"MS2"	"45.27235"	"18.8"	"100.000"	"80.5868"	"27733"	"27733"	"27705"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	""	"22.8"	""	"26.8"	""	"22.4"	""	"35.2"	"35.9"	""	"780"	"19"	"35.000"	"28.000"	"0.486479570554748"	"27"	"0.0001991"	"0.002214"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGMSAFVEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"728.40015"	"1455.79302"	"1455.79177"	"0.85"	"0.00062"	"8/78"	"8"	"78"	"341387.039916992"	"HCD"	"MS2"	"12.10207"	"33.6"	"100.000"	"80.5776"	"27756"	"27756"	"27732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.9"	""	"44.3"	""	"48.0"	""	"39.6"	""	"59.2"	"63.0"	""	"780"	"56"	"35.000"	"28.000"	"0.000100940303690971"	"24"	"0"	"2.965E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGMSAFVEk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"728.40021"	"1455.79314"	"1455.79177"	"0.94"	"0.00068"	"8/78"	"8"	"78"	"403667.862670898"	"HCD"	"MS2"	"17.96564"	"37.9"	"100.000"	"80.9026"	"27888"	"27888"	"27871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"53.8"	""	"56.5"	""	"36.1"	"1.1"	"69.3"	"78.5"	""	"775"	"44"	"35.000"	"28.000"	"0.00141994560176035"	"28"	"0"	"4.496E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.93921"	"1455.80307"	"1455.80667"	"-2.47"	"-0.00120"	"7/118"	"7"	"118"	"433597.750915527"	"HCD"	"MS2"	"30.64335"	"17.9"	"100.000"	"59.6839"	"19287"	"19287"	"19259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"19.1"	""	"25.2"	""	"29.3"	""	"35.1"	"32.7"	"NoQuanLabels"	"739"	"22"	"35.000"	"28.000"	"0.220604538392728"	"14"	"0.001488"	"0.01285"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9516"	"0.0000"	"1"	"1"	"1"	"485.93958"	"1455.80417"	"1455.80667"	"-1.72"	"-0.00083"	"8/118"	"8"	"118"	"1018042.23956299"	"HCD"	"MS2"	"8.240278"	"22.3"	"100.000"	"57.6562"	"18462"	"18462"	"18434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.2"	""	"30.0"	""	"26.1"	""	"40.4"	"1.9"	"41.3"	"44.4"	"NoQuanLabels"	"745"	"62"	"35.000"	"28.000"	"2.51261690317476E-05"	"19"	"9.9E-05"	"0.0004775"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"485.93961"	"1455.80426"	"1455.80667"	"-1.65"	"-0.00080"	"7/118"	"7"	"118"	"1239243.66503906"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"55.6621"	"17657"	"17657"	"17637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.1"	""	"46.7"	""	"54.7"	""	"50.8"	"1.6"	"67.9"	"66.3"	"NoQuanLabels"	"745"	"33"	"35.000"	"28.000"	"0.0187122614597089"	"28"	"0.001488"	"0.01212"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"485.93973"	"1455.80463"	"1455.80667"	"-1.40"	"-0.00068"	"7/118"	"7"	"118"	"749435.666381836"	"HCD"	"MS2"	"16.61208"	"17.5"	"100.000"	"58.5169"	"18778"	"18778"	"18750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"25.3"	""	"27.4"	""	"25.1"	"1.0"	"28.6"	"37.5"	"NoQuanLabels"	"731"	"49"	"35.000"	"28.000"	"0.000444515983236248"	"18"	"0.0001991"	"0.002342"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.7174"	"0.0000"	"1"	"1"	"1"	"485.93976"	"1455.80472"	"1455.80667"	"-1.34"	"-0.00065"	"8/118"	"8"	"118"	"3124159.49755859"	"HCD"	"MS2"	"13.5897"	"43.8"	"100.000"	"55.8699"	"17708"	"17708"	"17690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.9"	""	"68.3"	""	"68.3"	""	"49.2"	""	"82.5"	"91.8"	"NoQuanLabels"	"731"	"46"	"35.000"	"28.000"	"0.000979236022721357"	"28"	"9.9E-05"	"0.0005244"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.93985"	"1455.80500"	"1455.80667"	"-1.15"	"-0.00056"	"6/118"	"6"	"118"	"471908.039367676"	"HCD"	"MS2"	"42.16005"	"18.8"	"100.000"	"59.2098"	"19095"	"19095"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	"2.0"	"25.2"	""	"25.8"	""	"33.6"	""	"38.6"	"33.8"	"NoQuanLabels"	"727"	"29"	"35.000"	"28.000"	"0.046505510406126"	"14"	"0.0003294"	"0.006158"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"485.93994"	"1455.80527"	"1455.80667"	"-0.96"	"-0.00047"	"9/118"	"9"	"118"	"543282.799987793"	"HCD"	"MS2"	"39.10001"	"20.7"	"100.000"	"59.8428"	"19318"	"19318"	"19290"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"32.3"	""	"31.3"	""	"32.2"	""	"35.9"	"40.0"	"NoQuanLabels"	"728"	"35"	"35.000"	"28.000"	"0.0102825631086932"	"16"	"0.0001991"	"0.002798"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"485.94003"	"1455.80555"	"1455.80667"	"-0.77"	"-0.00038"	"8/118"	"8"	"118"	"8063763.87243652"	"HCD"	"MS2"	"20.38479"	"31.9"	"100.000"	"55.1875"	"17464"	"17464"	"17442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"50.7"	""	"53.0"	""	"41.3"	""	"51.9"	"50.7"	"NoQuanLabels"	"727"	"61"	"35.000"	"28.000"	"3.09388676886564E-05"	"19"	"0"	"8.764E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9184"	"0.0000"	"1"	"1"	"1"	"485.94009"	"1455.80573"	"1455.80667"	"-0.65"	"-0.00031"	"11/118"	"11"	"118"	"1300813.98706055"	"HCD"	"MS2"	"18.51148"	"19.1"	"100.000"	"57.6335"	"18417"	"18417"	"18391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"24.3"	""	"29.4"	""	"30.3"	"0.7"	"40.4"	"34.2"	"NoQuanLabels"	"721"	"49"	"35.000"	"28.000"	"0.000464413963385375"	"20"	"9.9E-05"	"0.0004464"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"485.94012"	"1455.80582"	"1455.80667"	"-0.59"	"-0.00028"	"9/118"	"9"	"118"	"1279259.95819092"	"HCD"	"MS2"	"4.133881"	"19.4"	"100.000"	"57.3410"	"18333"	"18333"	"18309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"26.8"	""	"26.4"	""	"29.9"	""	"37.8"	"38.6"	"NoQuanLabels"	"721"	"51"	"35.000"	"28.000"	"0.000276633816914936"	"19"	"0"	"0.0002714"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"485.94019"	"1455.80600"	"1455.80667"	"-0.46"	"-0.00022"	"9/118"	"9"	"118"	"9362649.1661377"	"HCD"	"MS2"	"32.55412"	"32.3"	"100.000"	"55.5625"	"17583"	"17583"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"54.3"	""	"48.0"	""	"39.7"	""	"48.9"	"59.0"	"NoQuanLabels"	"721"	"78"	"35.000"	"28.000"	"6.26477198764151E-07"	"20"	"0"	"5.77E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.94025"	"1455.80619"	"1455.80667"	"-0.33"	"-0.00016"	"9/118"	"9"	"118"	"701622.304504395"	"HCD"	"MS2"	"45.89924"	"26.0"	"100.000"	"56.2235"	"17881"	"17881"	"17858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.8"	""	"32.2"	""	"39.7"	""	"43.5"	"0.8"	"50.8"	"46.4"	"NoQuanLabels"	"724"	"39"	"35.000"	"28.000"	"0.00507818561051429"	"15"	"0.0001991"	"0.002151"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"485.94031"	"1455.80637"	"1455.80667"	"-0.21"	"-0.00010"	"7/118"	"7"	"118"	"858897.327758789"	"HCD"	"MS2"	"50.39208"	"32.7"	"100.000"	"56.5274"	"17969"	"17969"	"17953"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"42.7"	""	"42.6"	""	"55.5"	"1.9"	"63.9"	"59.6"	"NoQuanLabels"	"724"	"22"	"35.000"	"28.000"	"0.218126570158918"	"22"	"0.001453"	"0.01188"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"485.94043"	"1455.80674"	"1455.80667"	"0.04"	"0.00002"	"8/118"	"8"	"118"	"1028545.4609375"	"HCD"	"MS2"	"23.40458"	"21.7"	"100.000"	"57.9463"	"18545"	"18545"	"18518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.5"	""	"26.3"	""	"31.3"	""	"36.2"	""	"39.7"	"40.7"	"NoQuanLabels"	"722"	"53"	"35.000"	"28.000"	"0.00017478622469786"	"19"	"0.0001686"	"0.00136"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETYTNK"	"[K].lEETYTNk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"485.94049"	"1455.80692"	"1455.80953"	"-1.79"	"-0.00087"	"8/66"	"8"	"66"	"600261.585876465"	"HCD"	"MS2"	"49.67955"	"31.1"	"100.000"	"54.5118"	"17155"	"17155"	"17127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.7"	""	"37.9"	""	"34.2"	""	"53.9"	"0.1"	"68.4"	"62.1"	""	"724"	"11"	"35.000"	"28.000"	"2.77784859148979"	"17"	"0.006777"	"0.08431"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHPDYSVSLLLR"	"[R].RHPDYSVSLLLR.[L]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"485.94052"	"1455.80701"	"1455.80667"	"0.23"	"0.00011"	"8/118"	"8"	"118"	"544834.631164551"	"HCD"	"MS2"	"56.95765"	"21.5"	"100.000"	"59.5159"	"19185"	"19185"	"19157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"18.9"	""	"35.8"	""	"34.9"	"0.9"	"46.0"	"34.7"	"NoQuanLabels"	"726"	"32"	"35.000"	"28.000"	"0.0206969630837912"	"19"	"0.0001686"	"0.001187"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETYTNK"	"[K].lEETYTNk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"728.40814"	"1455.80901"	"1455.80953"	"-0.36"	"-0.00026"	"7/66"	"7"	"66"	"268697.382080078"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"54.4727"	"17139"	"17139"	"17112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.5"	""	"48.8"	""	"35.6"	""	"48.9"	""	"58.7"	"60.9"	""	"751"	"24"	"35.000"	"28.000"	"0.154386720274748"	"17"	"0.0005161"	"0.007002"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEETYTNK"	"[K].lEETYTNk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"728.40887"	"1455.81047"	"1455.80953"	"0.65"	"0.00047"	"6/66"	"6"	"66"	"338330.721557617"	"HCD"	"MS2"	"20.36102"	"36.0"	"100.000"	"54.1598"	"17045"	"17045"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.7"	""	"46.7"	""	"42.6"	""	"57.5"	""	"73.1"	"67.8"	""	"753"	"32"	"35.000"	"28.000"	"0.0241971925569858"	"20"	"0.0001991"	"0.001977"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WELNPEIVAR"	"[K].wELNPEIVAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X9"	"39S ribosomal protein L9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl9 PE=2 SV=1"	"Q641X9"	"39S ribosomal protein L9, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl9 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"3"	"728.41095"	"1455.81462"	"1455.81573"	"-0.76"	"-0.00055"	"5/92"	"5"	"92"	"226161.779907227"	"HCD"	"MS2"	"36.68413"	"11.5"	"100.000"	"106.0036"	"37978"	"37978"	"37967"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"13.2"	""	"13.0"	""	"20.7"	""	"26.4"	"21.3"	""	"737"	"6"	"35.000"	"28.000"	"9.066454621284"	"14"	"0.004672"	"0.05494"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITInDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"728.42114"	"1455.83501"	"1455.83686"	"-1.27"	"-0.00093"	"7/106"	"7"	"106"	"273837.399108887"	"HCD"	"MS2"	"6.036988"	"17.7"	"100.000"	"100.1878"	"35641"	"35641"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"23.2"	""	"22.8"	""	"26.4"	""	"33.4"	"37.5"	""	"699"	"35"	"35.000"	"28.000"	"0.00994139157053046"	"17"	"0"	"0.000149"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"728.42114"	"1455.83501"	"1455.83686"	"-1.27"	"-0.00093"	"7/106"	"7"	"106"	"273837.399108887"	"HCD"	"MS2"	"6.036988"	"17.7"	"100.000"	"100.1878"	"35641"	"35641"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"23.2"	""	"22.8"	""	"26.4"	""	"33.4"	"37.5"	""	"699"	"35"	"35.000"	"28.000"	"0.00994139157053046"	"17"	"0"	"0.000149"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITInDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"728.42120"	"1455.83513"	"1455.83686"	"-1.19"	"-0.00086"	"8/106"	"8"	"106"	"144114.430419922"	"HCD"	"MS2"	"8.731766"	"8.6"	"100.000"	"97.0129"	"34386"	"34386"	"34362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"14.3"	""	"12.7"	""	"12.4"	""	"15.9"	"17.4"	""	"709"	"22"	"35.000"	"28.000"	"0.229412057282873"	"16"	"0.0001991"	"0.004242"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"728.42120"	"1455.83513"	"1455.83686"	"-1.19"	"-0.00086"	"8/106"	"8"	"106"	"144114.430419922"	"HCD"	"MS2"	"8.731766"	"8.6"	"100.000"	"97.0129"	"34386"	"34386"	"34362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"14.3"	""	"12.7"	""	"12.4"	""	"15.9"	"17.4"	""	"709"	"22"	"35.000"	"28.000"	"0.229412057282873"	"16"	"0.0001991"	"0.004242"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITInDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"728.42133"	"1455.83537"	"1455.83686"	"-1.02"	"-0.00074"	"7/106"	"7"	"106"	"218944.428344727"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"96.9157"	"34316"	"34316"	"34297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"16.1"	""	"16.1"	""	"20.1"	"1.5"	"20.5"	"21.2"	""	"709"	"45"	"35.000"	"28.000"	"0.00100141995110762"	"18"	"0"	"3.757E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"728.42133"	"1455.83537"	"1455.83686"	"-1.02"	"-0.00074"	"7/106"	"7"	"106"	"218944.428344727"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"96.9157"	"34316"	"34316"	"34297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"16.1"	""	"16.1"	""	"20.1"	"1.5"	"20.5"	"21.2"	""	"709"	"45"	"35.000"	"28.000"	"0.00100141995110762"	"18"	"0"	"3.757E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITInDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"728.42188"	"1455.83647"	"1455.83686"	"-0.27"	"-0.00019"	"13/106"	"13"	"106"	"299532.144592285"	"HCD"	"MS2"	"34.20322"	"16.3"	"100.000"	"100.3366"	"35729"	"35729"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"23.4"	""	"20.6"	""	"29.1"	""	"35.6"	"27.4"	""	"725"	"21"	"35.000"	"28.000"	"0.27372093252872"	"15"	"0.001872"	"0.01539"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLnDLPVGR.[S]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"728.42188"	"1455.83647"	"1455.83686"	"-0.27"	"-0.00019"	"13/106"	"13"	"106"	"299532.144592285"	"HCD"	"MS2"	"34.20322"	"16.3"	"100.000"	"100.3366"	"35729"	"35729"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"23.4"	""	"20.6"	""	"29.1"	""	"35.6"	"27.4"	""	"725"	"21"	"35.000"	"28.000"	"0.27372093252872"	"15"	"0.001872"	"0.01539"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITINDLPVGR"	"[R].qITINDLPVGR.[S]"	"N-Term(TMT6plex); Q1(Deamidated)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"728.42236"	"1455.83745"	"1455.83686"	"0.41"	"0.00030"	"8/106"	"8"	"106"	"141606.895324707"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"99.8879"	"35519"	"35519"	"35492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"12.3"	""	"12.5"	""	"14.8"	""	"16.4"	"18.6"	""	"710"	"13"	"35.000"	"28.000"	"1.69913682774537"	"16"	"0.002286"	"0.02184"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QITLNDLPVGR"	"[R].qITLNDLPVGR.[S]"	"N-Term(TMT6plex); Q1(Deamidated)"	"1"	"1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"Q9Z0V5"	"Peroxiredoxin-4 OS=Rattus norvegicus OX=10116 GN=Prdx4 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"728.42236"	"1455.83745"	"1455.83686"	"0.41"	"0.00030"	"8/106"	"8"	"106"	"141606.895324707"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"99.8879"	"35519"	"35519"	"35492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"12.3"	""	"12.5"	""	"14.8"	""	"16.4"	"18.6"	""	"710"	"13"	"35.000"	"28.000"	"1.69913682774537"	"16"	"0.002286"	"0.02184"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIPPPDAK"	"[R].yPIPPPDAk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"P36506"	"Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"Q01986; P36506"	"Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus OX=10116 GN=Map2k1 PE=1 SV=2; Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.43457"	"1455.86186"	"1455.86117"	"0.47"	"0.00035"	"5/64"	"5"	"64"	"214981.362854004"	"HCD"	"MS2"	"67.25787"	"17.6"	"100.000"	"73.9693"	"25050"	"25050"	"25022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"23.1"	""	"25.6"	""	"26.8"	"1.7"	"29.1"	"29.4"	""	"609"	"11"	"34.000"	"27.000"	"2.33124166804478"	"13"	"0.003401"	"0.03815"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"728.87860"	"1456.74993"	"1456.75064"	"-0.49"	"-0.00036"	"14/88"	"14"	"88"	"911343.218566895"	"HCD"	"MS2"	"15.01335"	"88.7"	"100.000"	"62.2903"	"20309"	"20309"	"20288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.2"	""	"117.6"	""	"120.5"	""	"93.9"	""	"178.6"	"182.7"	""	"604"	"47"	"34.000"	"27.000"	"0.000625182687334894"	"19"	"0"	"4.591E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"728.87903"	"1456.75078"	"1456.75064"	"0.10"	"0.00007"	"14/88"	"14"	"88"	"873072.519775391"	"HCD"	"MS2"	"14.21275"	"89.2"	"100.000"	"62.3468"	"20365"	"20365"	"20345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.7"	""	"113.5"	""	"122.5"	""	"110.4"	"0.8"	"177.3"	"176.0"	""	"614"	"48"	"34.000"	"27.000"	"0.000442729412918135"	"21"	"0"	"3.446E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"728.88159"	"1456.75591"	"1456.75064"	"3.62"	"0.00264"	"12/88"	"12"	"88"	"648858.382141113"	"HCD"	"MS2"	"5.89015"	"54.7"	"100.000"	"62.6015"	"20436"	"20436"	"20411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.8"	""	"68.3"	""	"78.4"	""	"73.1"	"0.2"	"95.0"	"111.0"	""	"642"	"15"	"35.000"	"28.000"	"1.02212740447409"	"19"	"0.003786"	"0.04053"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTQEYAAK"	"[K].tSTQEYAAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"728.90546"	"1456.80364"	"1456.80478"	"-0.78"	"-0.00057"	"12/82"	"12"	"82"	"392240.253173828"	"HCD"	"MS2"	"100"	"37.5"	"100.000"	"34.8141"	"9199"	"9199"	"9179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"48.1"	""	"45.2"	""	"66.1"	""	"79.6"	"71.3"	""	"752"	"32"	"35.000"	"28.000"	"0.0229714201364495"	"16"	"0"	"0.0001171"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSTQEYAAK"	"[K].tSTQEYAAk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"P11730"	"Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Rattus norvegicus OX=10116 GN=Camk2g PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"728.90558"	"1456.80388"	"1456.80478"	"-0.62"	"-0.00045"	"7/82"	"7"	"82"	"375026.140258789"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"34.9243"	"9206"	"9206"	"9190"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"42.7"	""	"45.1"	""	"61.8"	""	"67.8"	"70.1"	""	"742"	"34"	"35.000"	"28.000"	"0.0152888179585109"	"21"	"0.0001686"	"0.001327"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLAFNALIHR"	"[K].dGLAFnALIHR.[H]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.27448"	"1456.80887"	"1456.81098"	"-1.45"	"-0.00070"	"13/90"	"13"	"90"	"504086.732543945"	"HCD"	"MS2"	"42.70879"	"18.9"	"100.000"	"89.5301"	"31371"	"31371"	"31347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"28.0"	""	"26.6"	""	"29.1"	""	"37.9"	"38.0"	""	"735"	"30"	"35.000"	"28.000"	"0.0376927082897392"	"14"	"9.9E-05"	"0.0009713"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLAFNALIHR"	"[K].dGLAFnALIHR.[H]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.27490"	"1456.81015"	"1456.81098"	"-0.57"	"-0.00028"	"10/90"	"10"	"90"	"479201.265808105"	"HCD"	"MS2"	"49.57348"	"20.1"	"100.000"	"89.5795"	"31351"	"31351"	"31325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"29.5"	""	"30.6"	""	"33.6"	""	"31.8"	"39.2"	""	"741"	"16"	"35.000"	"28.000"	"0.985798634655459"	"13"	"9.9E-05"	"0.0006342"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGVDNPAAK"	"[K].nIGVDNPAAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.28845"	"1456.85080"	"1456.85240"	"-1.10"	"-0.00053"	"10/90"	"10"	"90"	"3758569.09973145"	"HCD"	"MS2"	"60.36406"	"129.3"	"100.000"	"53.0253"	"16548"	"16548"	"16522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"154.2"	""	"163.7"	""	"158.4"	""	"262.4"	""	"252.1"	"235.8"	""	"692"	"28"	"35.000"	"28.000"	"0.0570264187467827"	"14"	"0.0001686"	"0.001172"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIGVDNPAAK"	"[K].nIGVDNPAAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.28888"	"1456.85208"	"1456.85240"	"-0.22"	"-0.00010"	"9/90"	"9"	"90"	"3518093.50372314"	"HCD"	"MS2"	"48.23351"	"133.0"	"100.000"	"52.6479"	"16428"	"16428"	"16404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.0"	""	"166.7"	""	"176.1"	""	"257.5"	""	"257.3"	"253.4"	""	"682"	"31"	"35.000"	"28.000"	"0.0294954060302511"	"14"	"0.0001686"	"0.001295"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"486.29059"	"1456.85721"	"1456.85979"	"-1.77"	"-0.00086"	"9/72"	"9"	"72"	"4474415.12469482"	"HCD"	"MS2"	"12.66439"	"124.9"	"100.000"	"64.8397"	"21344"	"21344"	"21323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"243.5"	""	"268.2"	""	"154.0"	""	"161.5"	""	"175.0"	"176.5"	""	"641"	"33"	"35.000"	"28.000"	"0.0156613081169378"	"15"	"0.0001686"	"0.001085"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"728.93268"	"1456.85808"	"1456.85979"	"-1.18"	"-0.00086"	"15/72"	"15"	"72"	"669006.988769531"	"HCD"	"MS2"	"0"	"47.2"	"100.000"	"64.6203"	"21289"	"21289"	"21259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.0"	""	"110.2"	""	"59.8"	""	"54.0"	""	"64.6"	"59.7"	""	"639"	"59"	"35.000"	"28.000"	"4.23127120494696E-05"	"23"	"0.0001686"	"0.001091"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.29095"	"1456.85831"	"1456.85979"	"-1.02"	"-0.00049"	"9/72"	"9"	"72"	"4449886.68078613"	"HCD"	"MS2"	"8.882435"	"119.6"	"100.000"	"64.8362"	"21376"	"21376"	"21362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.9"	""	"252.1"	""	"158.7"	""	"151.0"	""	"179.4"	"165.4"	""	"639"	"32"	"35.000"	"28.000"	"0.0219518366584547"	"15"	"9.9E-05"	"0.0006086"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"486.29102"	"1456.85849"	"1456.85979"	"-0.89"	"-0.00043"	"9/72"	"9"	"72"	"6337504.05523682"	"HCD"	"MS2"	"5.695297"	"157.9"	"100.000"	"65.1215"	"21493"	"21493"	"21477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"298.8"	""	"332.7"	""	"203.9"	""	"192.2"	""	"238.2"	"233.4"	""	"639"	"30"	"35.000"	"28.000"	"0.0296122128569702"	"15"	"9.9E-05"	"0.0005354"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"728.93311"	"1456.85893"	"1456.85979"	"-0.59"	"-0.00043"	"9/72"	"9"	"72"	"668050.090270996"	"HCD"	"MS2"	"0"	"44.2"	"100.000"	"64.6285"	"21258"	"21258"	"21231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.2"	""	"97.2"	""	"49.0"	""	"55.1"	""	"60.5"	"64.6"	""	"636"	"68"	"35.000"	"28.000"	"4.802054890242E-06"	"24"	"0"	"1.984E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"486.29120"	"1456.85904"	"1456.85979"	"-0.51"	"-0.00025"	"9/72"	"9"	"72"	"5806491.23474121"	"HCD"	"MS2"	"7.448079"	"163.1"	"100.000"	"65.1639"	"21476"	"21476"	"21457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.4"	""	"346.4"	""	"207.0"	""	"188.6"	""	"259.3"	"241.6"	""	"636"	"33"	"35.000"	"28.000"	"0.0154321743051555"	"15"	"9.9E-05"	"0.0008168"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"728.93365"	"1456.86003"	"1456.85979"	"0.17"	"0.00012"	"16/72"	"16"	"72"	"6556958.9888916"	"HCD"	"MS2"	"0"	"384.8"	"100.000"	"64.9121"	"21407"	"21407"	"21388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"785.3"	""	"872.1"	""	"475.4"	""	"457.0"	""	"535.2"	"504.6"	""	"655"	"65"	"35.000"	"28.000"	"1.06221224681912E-05"	"26"	"0"	"4.4E-06"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"728.93378"	"1456.86028"	"1456.85979"	"0.33"	"0.00024"	"9/72"	"9"	"72"	"5233152.34918213"	"HCD"	"MS2"	"0"	"307.9"	"100.000"	"65.2353"	"21505"	"21505"	"21489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"581.8"	""	"658.6"	""	"372.9"	""	"367.2"	""	"460.1"	"467.0"	""	"655"	"56"	"35.000"	"28.000"	"7.43380738991952E-05"	"24"	"0"	"3.373E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"728.93384"	"1456.86040"	"1456.85979"	"0.42"	"0.00030"	"13/72"	"13"	"72"	"422589.475585938"	"HCD"	"MS2"	"26.38487"	"32.6"	"100.000"	"65.5554"	"21636"	"21636"	"21615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.8"	""	"66.0"	""	"45.7"	""	"47.1"	""	"51.5"	"51.0"	""	"649"	"41"	"35.000"	"28.000"	"0.00252472860812416"	"21"	"0.0001991"	"0.003324"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"728.93390"	"1456.86052"	"1456.85979"	"0.50"	"0.00036"	"15/72"	"15"	"72"	"7043923.8449707"	"HCD"	"MS2"	"0"	"394.5"	"100.000"	"64.9316"	"21381"	"21381"	"21364"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"805.7"	""	"873.6"	""	"494.6"	""	"468.8"	"0.8"	"554.4"	"521.2"	""	"649"	"57"	"35.000"	"28.000"	"6.68674406856115E-05"	"25"	"0"	"8.675E-06"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"728.93396"	"1456.86064"	"1456.85979"	"0.58"	"0.00043"	"9/72"	"9"	"72"	"462392.226013184"	"HCD"	"MS2"	"27.81712"	"35.8"	"100.000"	"65.5545"	"21669"	"21669"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.6"	""	"64.2"	""	"43.9"	""	"42.6"	"0.2"	"61.8"	"58.5"	""	"649"	"56"	"35.000"	"28.000"	"7.820143116088E-05"	"23"	"0"	"2.675E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGMAPVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8971"	"0.0000"	"1"	"1"	"1"	"728.93445"	"1456.86162"	"1456.85979"	"1.25"	"0.00091"	"9/72"	"9"	"72"	"5861592.62268066"	"HCD"	"MS2"	"0"	"340.8"	"100.000"	"65.1972"	"21523"	"21523"	"21505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"651.3"	""	"716.6"	""	"432.6"	""	"389.9"	""	"517.6"	"512.4"	""	"599"	"68"	"34.000"	"27.000"	"4.47091925668909E-06"	"24"	"0"	"1.803E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"728.94067"	"1456.87407"	"1456.87755"	"-2.39"	"-0.00174"	"7/82"	"7"	"82"	"485903.120788574"	"HCD"	"MS2"	"20.70099"	"35.0"	"100.000"	"74.0016"	"25063"	"25063"	"25037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.8"	""	"44.6"	""	"48.2"	""	"60.7"	"0.1"	"56.4"	"60.6"	""	"547"	"40"	"34.000"	"27.000"	"0.00246012588548465"	"23"	"0"	"0.0003476"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"486.29703"	"1456.87653"	"1456.87755"	"-0.70"	"-0.00034"	"7/82"	"7"	"82"	"2588418.31396484"	"HCD"	"MS2"	"11.33743"	"66.6"	"100.000"	"74.1700"	"25131"	"25131"	"25110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.8"	""	"96.8"	""	"93.3"	""	"114.6"	""	"114.1"	"112.4"	""	"549"	"46"	"34.000"	"27.000"	"0.00066151904017447"	""	"0"	"4.787E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"486.29715"	"1456.87690"	"1456.87755"	"-0.45"	"-0.00022"	"7/82"	"7"	"82"	"2436154.74023438"	"HCD"	"MS2"	"8.061231"	"64.1"	"100.000"	"74.5699"	"25323"	"25323"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.5"	""	"92.9"	""	"85.0"	""	"98.2"	""	"125.7"	"116.7"	""	"549"	"48"	"34.000"	"27.000"	"0.000405081443384233"	"24"	"0"	"3.257E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"486.29730"	"1456.87735"	"1456.87755"	"-0.14"	"-0.00007"	"7/82"	"7"	"82"	"2376321.50506592"	"HCD"	"MS2"	"4.631372"	"62.6"	"100.000"	"74.4601"	"25248"	"25248"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.4"	""	"91.1"	""	"79.6"	""	"109.0"	"0.5"	"112.7"	"105.8"	""	"526"	"42"	"34.000"	"27.000"	"0.00158838489525988"	"24"	"0"	"6.991E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"486.29736"	"1456.87754"	"1456.87755"	"-0.01"	"0.00000"	"7/82"	"7"	"82"	"2469550.57092285"	"HCD"	"MS2"	"8.665456"	"62.8"	"100.000"	"74.2769"	"25204"	"25204"	"25185"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.6"	""	"93.2"	""	"84.3"	""	"110.3"	""	"110.8"	"101.0"	""	"526"	"46"	"34.000"	"27.000"	"0.000632347416401824"	"24"	"0"	"5.629E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"728.94244"	"1456.87761"	"1456.87755"	"0.04"	"0.00003"	"7/82"	"7"	"82"	"719738.767456055"	"HCD"	"MS2"	"15.00603"	"58.3"	"100.000"	"74.7335"	"25390"	"25390"	"25379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.8"	""	"77.0"	""	"79.3"	""	"95.3"	""	"109.2"	"115.8"	""	"526"	"35"	"34.000"	"27.000"	"0.0092035578928458"	"23"	"9.9E-05"	"0.0007486"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"728.94250"	"1456.87773"	"1456.87755"	"0.13"	"0.00009"	"7/82"	"7"	"82"	"2409106.69598389"	"HCD"	"MS2"	"0"	"146.6"	"100.000"	"74.3149"	"25190"	"25190"	"25171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"219.6"	""	"203.8"	""	"201.4"	""	"245.6"	""	"261.1"	"258.0"	""	"524"	"38"	"34.000"	"27.000"	"0.00427859610348316"	"22"	"0"	"0.0003573"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"728.94263"	"1456.87798"	"1456.87755"	"0.29"	"0.00021"	"7/82"	"7"	"82"	"694350.115112305"	"HCD"	"MS2"	"16.12438"	"56.1"	"100.000"	"74.6240"	"25315"	"25315"	"25298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.9"	""	"81.4"	""	"79.3"	""	"85.5"	"0.4"	"100.6"	"103.6"	""	"524"	"26"	"34.000"	"27.000"	"0.0664203701190451"	"20"	"0.0001686"	"0.001862"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"486.29758"	"1456.87818"	"1456.87755"	"0.43"	"0.00021"	"7/82"	"7"	"82"	"591062.274169922"	"HCD"	"MS2"	"38.66335"	"24.4"	"100.000"	"74.7691"	"25373"	"25373"	"25349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"32.6"	""	"38.6"	""	"39.6"	""	"44.3"	"43.6"	""	"524"	"18"	"34.000"	"27.000"	"0.415242016424812"	"15"	"0.0001991"	"0.003045"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"728.94275"	"1456.87822"	"1456.87755"	"0.46"	"0.00034"	"8/82"	"8"	"82"	"2366720.15637207"	"HCD"	"MS2"	"0"	"143.4"	"100.000"	"74.4567"	"25278"	"25278"	"25261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"216.7"	""	"212.1"	""	"190.5"	""	"230.0"	""	"251.1"	"258.5"	""	"524"	"47"	"34.000"	"27.000"	"0.000468059744611237"	"23"	"0"	"6.012E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILQEGVDPK"	"[R].iLQEGVDPk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"Q64428"	"Trifunctional enzyme subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadha PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"728.94281"	"1456.87834"	"1456.87755"	"0.54"	"0.00040"	"7/82"	"7"	"82"	"593409.616088867"	"HCD"	"MS2"	"9.330941"	"40.8"	"100.000"	"74.1411"	"25149"	"25149"	"25126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.5"	""	"62.5"	""	"59.6"	""	"62.2"	""	"69.5"	"69.5"	""	"528"	"37"	"34.000"	"27.000"	"0.00572273883672399"	"22"	"9.9E-05"	"0.0007011"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFTDFTDVR"	"[R].nNFTDFTDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.36420"	"1457.72112"	"1457.72222"	"-0.76"	"-0.00055"	"5/98"	"5"	"98"	"273501.842773438"	"HCD"	"MS2"	"12.36417"	"19.9"	"100.000"	"82.8979"	"28665"	"28665"	"28645"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"19.4"	""	"27.3"	""	"31.6"	"1.2"	"39.6"	"38.4"	""	"486"	"31"	"33.000"	"26.000"	"0.0182644363246424"	"14"	"0.0001686"	"0.001231"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFTDFTDVR"	"[R].nNFTDFTDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.36432"	"1457.72136"	"1457.72222"	"-0.59"	"-0.00043"	"4/98"	"4"	"98"	"219611.895507813"	"HCD"	"MS2"	"28.14931"	"16.0"	"100.000"	"82.5748"	"28535"	"28535"	"28507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"16.6"	""	"20.4"	""	"27.4"	""	"36.4"	"34.8"	""	"486"	"16"	"33.000"	"26.000"	"0.603401344586823"	"14"	"0.00296"	"0.03154"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFTDFTDVR"	"[R].nNFTDFTDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"729.36462"	"1457.72197"	"1457.72222"	"-0.17"	"-0.00013"	"7/98"	"7"	"98"	"329615.977539063"	"HCD"	"MS2"	"18.53026"	"20.7"	"100.000"	"82.8970"	"28693"	"28693"	"28675"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.4"	""	"21.9"	""	"22.9"	""	"35.4"	""	"39.0"	"45.0"	""	"504"	"42"	"34.000"	"27.000"	"0.00177992023674266"	"20"	"9.9E-05"	"0.0008509"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFTDFTDVR"	"[R].nNFTDFTDVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"Q8K3P7"	"Histidine triad nucleotide-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hint3 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.36572"	"1457.72417"	"1457.72222"	"1.33"	"0.00097"	"4/98"	"4"	"98"	"167269.921386719"	"HCD"	"MS2"	"43.76953"	"14.4"	"100.000"	"82.5830"	"28567"	"28567"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"13.8"	""	"16.1"	""	"26.3"	"1.3"	"33.0"	"27.9"	""	"503"	"9"	"34.000"	"27.000"	"2.83490160228141"	"13"	"0.007412"	"0.09403"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLMEYAK"	"[R].nDLmEYAk.[Q]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"729.38855"	"1457.76982"	"1457.77104"	"-0.83"	"-0.00061"	"7/76"	"7"	"76"	"366715.553527832"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"54.7510"	"17252"	"17252"	"17231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"30.7"	""	"37.2"	""	"87.1"	""	"60.9"	"60.9"	""	"793"	"42"	"35.000"	"28.000"	"0.00241125528007012"	""	"0.003818"	"0.04113"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDLMEYAK"	"[R].nDLmEYAk.[Q]"	"N-Term(TMT6plex); M4(Oxidation); K8(TMT6plex)"	"1"	"1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"P09034"	"Argininosuccinate synthase OS=Rattus norvegicus OX=10116 GN=Ass1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"729.38947"	"1457.77165"	"1457.77104"	"0.42"	"0.00031"	"9/76"	"9"	"76"	"265261.059265137"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"54.4612"	"17168"	"17168"	"17141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.1"	""	"19.4"	""	"26.7"	""	"60.3"	""	"48.5"	"38.9"	""	"810"	"18"	"36.000"	"29.000"	"0.617241365287903"	"20"	"0.006958"	"0.08699"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P0DMW0; P06761"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"729.39813"	"1457.78899"	"1457.79097"	"-1.36"	"-0.00099"	"7/100"	"7"	"100"	"1470685.52990723"	"HCD"	"MS2"	"21.73458"	"66.8"	"100.000"	"51.5134"	"15933"	"15933"	"15917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.1"	""	"107.4"	""	"94.8"	""	"95.5"	""	"93.1"	"101.4"	""	"850"	"41"	"36.000"	"29.000"	"0.00356770494270744"	""	"0"	"3.315E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P0DMW0; P06761"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.4878"	"0.0000"	"1"	"1"	"1"	"729.39886"	"1457.79045"	"1457.79097"	"-0.36"	"-0.00026"	"8/100"	"8"	"100"	"1164593.35296631"	"HCD"	"MS2"	"28.0851"	"53.9"	"100.000"	"51.1804"	"15835"	"15835"	"15814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.1"	""	"80.9"	""	"75.2"	""	"78.6"	""	"75.1"	"83.2"	""	"871"	"41"	"36.000"	"29.000"	"0.00353173540695348"	""	"0"	"0.0001189"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P0DMW0; P06761"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"729.39905"	"1457.79082"	"1457.79097"	"-0.10"	"-0.00008"	"9/100"	"9"	"100"	"2189230.09277344"	"HCD"	"MS2"	"3.05789"	"97.1"	"100.000"	"51.4870"	"15955"	"15955"	"15939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.8"	""	"167.1"	""	"141.2"	""	"129.9"	"0.1"	"145.6"	"137.8"	""	"871"	"47"	"36.000"	"29.000"	"0.000864944336509134"	""	"0"	"3.587E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEIIANDQGNR"	"[KR].vEIIANDQGNR.[TI]"	"N-Term(TMT6plex)"	"3"	"5"	"P63018; P0DMW0; P06761"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1;Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P55063; P63018; P0DMW0; P06761; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"729.39966"	"1457.79204"	"1457.79097"	"0.73"	"0.00053"	"13/100"	"13"	"100"	"2214820.5166626"	"HCD"	"MS2"	"3.213073"	"98.4"	"100.000"	"51.7909"	"16045"	"16045"	"16033"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.6"	""	"158.5"	""	"154.2"	""	"124.0"	"1.4"	"139.1"	"136.9"	""	"874"	"45"	"36.000"	"29.000"	"0.00126322710859371"	""	"0"	"1.022E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"729.91107"	"1458.81487"	"1458.81540"	"-0.36"	"-0.00026"	"8/124"	"8"	"124"	"1127340.24554443"	"HCD"	"MS2"	"4.730077"	"40.7"	"100.000"	"69.8331"	"23405"	"23405"	"23388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"64.3"	""	"63.7"	""	"57.1"	""	"65.3"	"71.9"	""	"836"	"44"	"36.000"	"29.000"	"0.0014899657377217"	"25"	"0.0008247"	"0.007662"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"729.91113"	"1458.81499"	"1458.81540"	"-0.28"	"-0.00020"	"6/124"	"6"	"124"	"695757.683288574"	"HCD"	"MS2"	"10.27207"	"31.3"	"100.000"	"69.5152"	"23275"	"23275"	"23259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.7"	""	"50.7"	""	"57.5"	""	"42.7"	""	"47.7"	"47.1"	""	"836"	"39"	"36.000"	"29.000"	"0.00472254692333229"	""	"0.0001686"	"0.00155"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"729.91119"	"1458.81511"	"1458.81540"	"-0.19"	"-0.00014"	"5/124"	"5"	"124"	"344384.378234863"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"70.1441"	"23531"	"23531"	"23512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"30.0"	""	"27.8"	""	"32.3"	""	"33.1"	"33.1"	""	"836"	"26"	"36.000"	"29.000"	"0.115924780374447"	"24"	"0.00329"	"0.03533"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"729.91138"	"1458.81548"	"1458.81540"	"0.06"	"0.00004"	"6/124"	"6"	"124"	"440221.377380371"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"69.9903"	"23434"	"23434"	"23416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"35.8"	""	"32.1"	""	"35.8"	""	"36.4"	"37.0"	""	"821"	"34"	"36.000"	"29.000"	"0.0163422993512211"	"26"	"0.000264"	"0.006033"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"729.91162"	"1458.81597"	"1458.81540"	"0.39"	"0.00029"	"7/124"	"7"	"124"	"1239618.4831543"	"HCD"	"MS2"	"2.628616"	"44.5"	"100.000"	"69.6954"	"23315"	"23315"	"23298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.2"	""	"68.9"	""	"74.8"	""	"59.9"	""	"72.1"	"74.5"	""	"809"	"38"	"36.000"	"29.000"	"0.00665148362040439"	"29"	"0.0001991"	"0.003804"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].VNSGAFPAPIEk.[S]"	"K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"729.91248"	"1458.81767"	"1458.81540"	"1.56"	"0.00114"	"6/124"	"6"	"124"	"514697.495666504"	"HCD"	"MS2"	"14.59538"	"27.1"	"100.000"	"69.3913"	"23191"	"23191"	"23168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"47.2"	""	"46.5"	""	"36.5"	""	"36.3"	"40.6"	""	"808"	"39"	"36.000"	"29.000"	"0.00457489746747165"	""	"0.002462"	"0.02306"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"729.91315"	"1458.81902"	"1458.82043"	"-0.97"	"-0.00071"	"9/80"	"9"	"80"	"2361172.47320557"	"HCD"	"MS2"	"0"	"192.8"	"100.000"	"63.7019"	"20884"	"20884"	"20866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"295.9"	""	"264.9"	""	"270.3"	""	"298.0"	"0.1"	"321.6"	"374.1"	""	"893"	"50"	"36.000"	"29.000"	"0.000408151562316466"	"21"	"0"	"1.603E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASPGSPLEK"	"[K].dASPGSPLEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"729.91333"	"1458.81938"	"1458.82043"	"-0.72"	"-0.00052"	"14/88"	"14"	"88"	"454831.209960938"	"HCD"	"MS2"	"0"	"36.5"	"100.000"	"48.7571"	"14849"	"14849"	"14830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"68.7"	""	"36.5"	""	"69.4"	""	"65.6"	"53.8"	""	"885"	"50"	"36.000"	"29.000"	"0.000449690046595283"	"18"	"9.9E-05"	"0.0004186"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"729.91339"	"1458.81951"	"1458.82043"	"-0.63"	"-0.00046"	"14/80"	"14"	"80"	"485458.614318848"	"HCD"	"MS2"	"16.08325"	"45.6"	"100.000"	"61.0861"	"19856"	"19856"	"19832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.1"	""	"41.8"	""	"47.2"	""	"77.8"	""	"80.1"	"65.2"	""	"883"	"39"	"36.000"	"29.000"	"0.0061084455631604"	"23"	"0"	"6.252E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNEPQPSK"	"[R].sLnEPQPSk.[S]"	"N-Term(TMT6plex); N3(Deamidated); K9(TMT6plex)"	"1"	"1"	"Q5RKI3"	"DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1"	"Q5RKI3"	"DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"729.91339"	"1458.81951"	"1458.82043"	"-0.63"	"-0.00046"	"5/90"	"5"	"90"	"910039.32043457"	"HCD"	"MS2"	"0"	"66.8"	"100.000"	"49.4876"	"15145"	"15145"	"15127"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.3"	""	"38.6"	""	"60.1"	""	"124.9"	""	"176.8"	"162.1"	""	"883"	"28"	"36.000"	"29.000"	"0.0731022438871796"	"24"	"0.008029"	"0.1019"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"729.91345"	"1458.81963"	"1458.82043"	"-0.55"	"-0.00040"	"15/80"	"15"	"80"	"646823.478027344"	"HCD"	"MS2"	"28.42309"	"55.6"	"100.000"	"61.2081"	"19874"	"19874"	"19849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.6"	""	"60.1"	""	"69.0"	""	"73.3"	"1.1"	"96.8"	"82.9"	""	"883"	"40"	"36.000"	"29.000"	"0.0039712818224551"	"16"	"0"	"4.127E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"729.91370"	"1458.82012"	"1458.82043"	"-0.22"	"-0.00016"	"8/80"	"8"	"80"	"2872942.76879883"	"HCD"	"MS2"	"6.331696"	"224.4"	"100.000"	"63.3808"	"20785"	"20785"	"20766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"386.6"	""	"304.2"	""	"291.9"	""	"363.9"	"0.5"	"371.0"	"404.2"	""	"886"	"48"	"36.000"	"29.000"	"0.000784158268534617"	"21"	"0"	"1.992E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"729.91388"	"1458.82048"	"1458.82043"	"0.04"	"0.00003"	"8/80"	"8"	"80"	"350799.527587891"	"HCD"	"MS2"	"43.62849"	"36.4"	"100.000"	"61.4107"	"19988"	"19988"	"19958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.0"	""	"46.2"	""	"45.3"	""	"44.5"	"1.4"	"69.9"	"63.0"	""	"858"	"10"	"36.000"	"29.000"	"4.32969488126897"	"20"	"0.00296"	"0.03158"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"729.91388"	"1458.82048"	"1458.82043"	"0.04"	"0.00003"	"8/80"	"8"	"80"	"2470836.84936523"	"HCD"	"MS2"	"0"	"191.9"	"100.000"	"63.6799"	"20907"	"20907"	"20889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"308.1"	""	"245.5"	""	"273.9"	""	"292.4"	""	"328.8"	"370.8"	""	"858"	"51"	"36.000"	"29.000"	"0.000305110597357278"	"21"	"0"	"1.678E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDEGPNGLK"	"[K].gIDEGPnGLk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K10(TMT6plex)"	"1"	"1"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"O35077"	"Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic OS=Rattus norvegicus OX=10116 GN=Gpd1 PE=1 SV=4"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"729.91406"	"1458.82085"	"1458.82043"	"0.29"	"0.00021"	"8/80"	"8"	"80"	"3176742.06109619"	"HCD"	"MS2"	"4.845278"	"243.9"	"100.000"	"63.4099"	"20765"	"20765"	"20747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"401.0"	""	"327.9"	""	"333.6"	""	"407.2"	"2.7"	"406.7"	"428.3"	""	"856"	"50"	"36.000"	"29.000"	"0.000449204159463195"	"21"	"0"	"2.104E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DASPGSPLEK"	"[K].dASPGSPLEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"P22791"	"Hydroxymethylglutaryl-CoA synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcs2 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"729.91431"	"1458.82134"	"1458.82043"	"0.62"	"0.00045"	"8/88"	"8"	"88"	"455905.781860352"	"HCD"	"MS2"	"0"	"38.0"	"100.000"	"49.0827"	"14946"	"14946"	"14922"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"62.8"	""	"52.5"	""	"61.6"	""	"66.7"	"64.6"	""	"864"	"44"	"36.000"	"29.000"	"0.00183858514473777"	"19"	"0.0001991"	"0.003086"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQHDLALLR"	"[K].tYQHDLALLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"486.94601"	"1458.82349"	"1458.82663"	"-2.15"	"-0.00105"	"8/94"	"8"	"94"	"2558556.29064941"	"HCD"	"MS2"	"38.39347"	"65.7"	"100.000"	"64.0328"	"21050"	"21050"	"21033"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.4"	""	"103.1"	""	"95.5"	""	"100.8"	""	"121.0"	"115.8"	""	"879"	"25"	"36.000"	"29.000"	"0.144863468501993"	"21"	"0.0001991"	"0.002958"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQHDLALLR"	"[K].tYQHDLALLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"486.94659"	"1458.82523"	"1458.82663"	"-0.96"	"-0.00047"	"8/94"	"8"	"94"	"2353345.05749512"	"HCD"	"MS2"	"34.75167"	"65.7"	"100.000"	"64.0135"	"21010"	"21010"	"20988"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.1"	""	"89.6"	""	"99.9"	""	"103.8"	""	"120.7"	"125.8"	""	"879"	"19"	"36.000"	"29.000"	"0.532057879695436"	"23"	"0.001049"	"0.008569"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQHDLALLR"	"[K].tYQHDLALLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"486.94669"	"1458.82550"	"1458.82663"	"-0.77"	"-0.00037"	"9/94"	"9"	"94"	"1366066.12084961"	"HCD"	"MS2"	"8.928741"	"29.9"	"100.000"	"64.3331"	"21171"	"21171"	"21153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"39.8"	""	"38.1"	""	"48.4"	"0.2"	"57.8"	"57.6"	""	"873"	"22"	"36.000"	"29.000"	"0.25467378801549"	"16"	"0.0001991"	"0.003731"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYQHDLALLR"	"[K].tYQHDLALLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"486.94699"	"1458.82642"	"1458.82663"	"-0.14"	"-0.00007"	"7/94"	"7"	"94"	"1554635.43121338"	"HCD"	"MS2"	"11.90137"	"29.9"	"100.000"	"64.3184"	"21132"	"21132"	"21114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.6"	""	"41.9"	""	"48.8"	""	"43.5"	""	"55.0"	"49.0"	""	"874"	"28"	"36.000"	"29.000"	"0.0644883755041566"	"22"	"9.9E-05"	"0.0007739"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIIDVEGIVR"	"[K].eSIIDVEGIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"729.92218"	"1458.83708"	"1458.83652"	"0.38"	"0.00028"	"4/92"	"4"	"92"	"155541.905944824"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"107.1510"	"38431"	"38431"	"38419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"11.6"	""	"13.4"	""	"14.7"	""	"15.0"	"17.7"	""	"864"	"10"	"36.000"	"29.000"	"4.16374138205555"	"17"	"0.0009352"	"0.008238"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESIIDVEGIVR"	"[K].eSIIDVEGIVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"729.92297"	"1458.83867"	"1458.83652"	"1.47"	"0.00107"	"7/92"	"7"	"92"	"95328.7235717773"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"107.4321"	"38560"	"38560"	"38549"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"7.1"	""	"8.1"	""	"8.1"	""	"13.5"	"11.0"	""	"873"	"41"	"36.000"	"29.000"	"0.0032061530345058"	""	"9.9E-05"	"0.0004249"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIRR"	"[R].sEIDLLDIRR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"486.95383"	"1458.84693"	"1458.84776"	"-0.57"	"-0.00028"	"6/86"	"6"	"86"	"1173407.57720947"	"HCD"	"MS2"	"22.54365"	"34.4"	"100.000"	"87.3898"	"30506"	"30506"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"57.1"	""	"42.4"	""	"43.8"	"0.2"	"43.6"	"51.4"	""	"831"	"52"	"36.000"	"29.000"	"0.000244664538800248"	""	"0"	"2.485E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIRR"	"[R].sEIDLLnIRR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"486.95383"	"1458.84693"	"1458.84776"	"-0.57"	"-0.00028"	"6/84"	"6"	"84"	"1173407.57720947"	"HCD"	"MS2"	"22.54365"	"34.4"	"100.000"	"87.3898"	"30506"	"30506"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"57.1"	""	"42.4"	""	"43.8"	"0.2"	"43.6"	"51.4"	""	"831"	"52"	"36.000"	"29.000"	"0.000244664538800248"	""	"0"	"2.485E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIRR"	"[R].sEIDLLDIRR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"486.95389"	"1458.84711"	"1458.84776"	"-0.44"	"-0.00022"	"7/86"	"7"	"86"	"1002313.82061768"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"87.1323"	"30368"	"30368"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.6"	""	"54.8"	""	"56.8"	""	"46.2"	""	"44.7"	"41.0"	""	"826"	"27"	"36.000"	"29.000"	"0.0899394135981854"	"24"	"0"	"0.0002089"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIRR"	"[R].sEIDLLnIRR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"486.95389"	"1458.84711"	"1458.84776"	"-0.44"	"-0.00022"	"7/84"	"7"	"84"	"1002313.82061768"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"87.1323"	"30368"	"30368"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.6"	""	"54.8"	""	"56.8"	""	"46.2"	""	"44.7"	"41.0"	""	"826"	"27"	"36.000"	"29.000"	"0.0899394135981854"	"24"	"0"	"0.000209"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIRR"	"[R].sEIDLLDIRR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"486.95395"	"1458.84729"	"1458.84776"	"-0.32"	"-0.00015"	"6/86"	"6"	"86"	"1211596.17053223"	"HCD"	"MS2"	"26.6104"	"35.1"	"100.000"	"87.4345"	"30489"	"30489"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.9"	""	"50.5"	""	"54.2"	""	"32.6"	"1.7"	"45.3"	"49.4"	""	"826"	"52"	"36.000"	"29.000"	"0.000233856826372799"	""	"0"	"1.252E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIRR"	"[R].sEIDLLnIRR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"486.95395"	"1458.84729"	"1458.84776"	"-0.32"	"-0.00015"	"6/84"	"6"	"84"	"1211596.17053223"	"HCD"	"MS2"	"26.6104"	"35.1"	"100.000"	"87.4345"	"30489"	"30489"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.9"	""	"50.5"	""	"54.2"	""	"32.6"	"1.7"	"45.3"	"49.4"	""	"826"	"52"	"36.000"	"29.000"	"0.000233856826372799"	""	"0"	"1.252E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SEIDLLDIRR"	"[R].sEIDLLDIRR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"486.95395"	"1458.84729"	"1458.84776"	"-0.32"	"-0.00015"	"6/86"	"6"	"86"	"1502943.58587646"	"HCD"	"MS2"	"23.14862"	"43.6"	"100.000"	"87.0902"	"30385"	"30385"	"30365"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.0"	""	"72.9"	""	"65.3"	""	"48.2"	"0.2"	"46.3"	"52.3"	""	"826"	"36"	"36.000"	"29.000"	"0.00954882758342521"	""	"0"	"2.049E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SEIDLLNIRR"	"[R].sEIDLLnIRR.[E]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"486.95395"	"1458.84729"	"1458.84776"	"-0.32"	"-0.00015"	"6/84"	"6"	"84"	"1502943.58587646"	"HCD"	"MS2"	"23.14862"	"43.6"	"100.000"	"87.0902"	"30385"	"30385"	"30365"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.0"	""	"72.9"	""	"65.3"	""	"48.2"	"0.2"	"46.3"	"52.3"	""	"826"	"36"	"36.000"	"29.000"	"0.00954882758342521"	""	"0"	"2.049E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"486.96875"	"1458.89170"	"1458.89320"	"-1.03"	"-0.00050"	"6/82"	"6"	"82"	"358933.801147461"	"HCD"	"MS2"	"52.53546"	"14.1"	"100.000"	"105.7858"	"37892"	"37892"	"37865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"15.5"	""	"25.4"	""	"27.5"	""	"23.2"	"26.5"	""	"578"	"24"	"34.000"	"27.000"	"0.119921718321331"	""	"9.9E-05"	"0.0007451"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"486.96878"	"1458.89179"	"1458.89320"	"-0.97"	"-0.00047"	"6/82"	"6"	"82"	"320975.053100586"	"HCD"	"MS2"	"51.3528"	"11.1"	"100.000"	"106.1102"	"38040"	"38040"	"38018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"11.3"	""	"16.0"	""	"19.5"	""	"22.5"	"23.9"	""	"578"	"24"	"34.000"	"27.000"	"0.12187028949086"	""	"0.001615"	"0.01386"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPGTVALVSK"	"[K].ePGTVALVSk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"P97576"	"GrpE protein homolog 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Grpel1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.94977"	"1458.89226"	"1458.89320"	"-0.65"	"-0.00047"	"5/88"	"5"	"88"	"233155.486633301"	"HCD"	"MS2"	"51.49558"	"20.8"	"100.000"	"71.3794"	"24030"	"24030"	"24005"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.8"	""	"26.3"	""	"28.0"	""	"35.8"	""	"39.9"	"38.0"	""	"551"	"22"	"34.000"	"27.000"	"0.162600397587343"	"14"	"0.003401"	"0.03803"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"729.94995"	"1458.89263"	"1458.89320"	"-0.39"	"-0.00029"	"5/82"	"5"	"82"	"138269.486328125"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"106.1959"	"38074"	"38074"	"38054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"10.9"	""	"19.6"	""	"14.1"	""	"14.4"	"24.8"	""	"551"	"19"	"34.000"	"27.000"	"0.327432363658898"	"26"	"0.0009352"	"0.00815"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEIDALK"	"[R].lQAEIDALk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.3438"	"0.0000"	"1"	"1"	"1"	"729.95081"	"1458.89433"	"1458.89320"	"0.78"	"0.00057"	"11/82"	"11"	"82"	"177364.484130859"	"HCD"	"MS2"	"5.597002"	"14.5"	"100.000"	"105.9063"	"37940"	"37940"	"37926"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.8"	""	"18.6"	""	"23.7"	""	"23.0"	""	"27.5"	"24.9"	""	"558"	"32"	"34.000"	"27.000"	"0.0188627150134363"	""	"0.0001991"	"0.004774"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"730.37183"	"1459.73638"	"1459.73787"	"-1.03"	"-0.00075"	"16/96"	"16"	"96"	"2247558.71295166"	"HCD"	"MS2"	"0"	"108.6"	"100.000"	"75.7508"	"25772"	"25772"	"25759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.0"	""	"120.5"	""	"143.2"	""	"169.9"	"0.4"	"193.4"	"214.5"	""	"618"	"54"	"34.000"	"27.000"	"0.000137707780754829"	""	"0"	"7.359E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4600"	"0.0000"	"1"	"1"	"1"	"730.37213"	"1459.73699"	"1459.73787"	"-0.61"	"-0.00044"	"14/96"	"14"	"96"	"9686967.37097168"	"HCD"	"MS2"	"0"	"337.6"	"78.894"	"75.5310"	"25714"	"25714"	"25697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"569.6"	""	"395.3"	""	"393.9"	""	"559.4"	""	"604.3"	"682.6"	""	"617"	"50"	"34.000"	"27.000"	"0.000298026696168357"	""	"0"	"5.029E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"730.37262"	"1459.73796"	"1459.73787"	"0.06"	"0.00004"	"15/96"	"15"	"96"	"2692969.96459961"	"HCD"	"MS2"	"1.829188"	"124.9"	"100.000"	"75.2314"	"25592"	"25592"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"215.4"	""	"152.3"	""	"135.9"	""	"222.3"	""	"224.4"	"232.9"	""	"629"	"48"	"34.000"	"27.000"	"0.000510059275619384"	""	"0"	"2.57E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.3830"	"0.0000"	"1"	"1"	"1"	"730.37274"	"1459.73821"	"1459.73787"	"0.23"	"0.00017"	"13/96"	"13"	"96"	"8641173.23022461"	"HCD"	"MS2"	"0"	"370.0"	"100.000"	"75.4446"	"25648"	"25648"	"25631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"650.0"	""	"413.2"	""	"448.4"	""	"619.8"	"1.8"	"653.9"	"717.3"	""	"630"	"47"	"34.000"	"27.000"	"0.000681256334974011"	""	"0"	"4.661E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"730.37305"	"1459.73882"	"1459.73787"	"0.65"	"0.00047"	"15/96"	"15"	"96"	"2774884.64074707"	"HCD"	"MS2"	"3.746254"	"132.6"	"100.000"	"75.1359"	"25522"	"25522"	"25505"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"220.3"	""	"163.9"	""	"155.9"	""	"237.9"	""	"222.2"	"258.7"	""	"630"	"48"	"34.000"	"27.000"	"0.000520367966442139"	""	"0"	"3.073E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WIDNPTVDDR"	"[R].wIDNPTVDDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"730.37323"	"1459.73918"	"1459.73787"	"0.90"	"0.00065"	"15/96"	"15"	"96"	"2376367.62103271"	"HCD"	"MS2"	"1.458089"	"112.1"	"100.000"	"75.8326"	"25837"	"25837"	"25825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.5"	"2.7"	"121.4"	""	"132.4"	""	"171.1"	""	"211.5"	"244.1"	""	"629"	"45"	"34.000"	"27.000"	"0.000969662610353423"	""	"0"	"1.326E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSYPYDMAR"	"[R].lVSYPYDmAR.[T]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.2143"	"0.0000"	"1"	"1"	"1"	"730.37671"	"1459.74614"	"1459.74527"	"0.60"	"0.00044"	"5/80"	"5"	"80"	"234231.355651855"	"HCD"	"MS2"	"13.96037"	"18.5"	"100.000"	"72.8273"	"24614"	"24614"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"23.5"	""	"24.0"	""	"34.7"	"1.1"	"33.3"	"29.6"	""	"670"	"14"	"35.000"	"28.000"	"1.27070519966183"	"25"	"0.00307"	"0.03346"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQTVYYAK"	"[R].eQTVYYAk.[A]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q03346"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3"	"Q03346"	"Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus OX=10116 GN=Pmpcb PE=1 SV=3"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"730.41412"	"1459.82097"	"1459.81970"	"0.87"	"0.00063"	"6/72"	"6"	"72"	"210163.16229248"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"51.3101"	"15851"	"15851"	"15821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"25.8"	""	"31.5"	""	"30.5"	""	"42.3"	"37.8"	""	"994"	"20"	"36.000"	"29.000"	"0.527662691927766"	"21"	"0.001261"	"0.01004"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMANPPAAVK"	"[R].smANPPAAVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"730.41986"	"1459.83245"	"1459.83431"	"-1.27"	"-0.00093"	"10/84"	"10"	"84"	"209856.693908691"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"36.8955"	"10039"	"10039"	"10010"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.9"	""	"16.9"	""	"21.6"	""	"35.2"	""	"29.6"	"29.3"	""	"957"	"25"	"36.000"	"29.000"	"0.169387727708424"	"17"	"0.001951"	"0.01708"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMANPPAAVK"	"[R].smANPPAAVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"730.42004"	"1459.83281"	"1459.83431"	"-1.02"	"-0.00075"	"8/84"	"8"	"84"	"537089.53717041"	"HCD"	"MS2"	"0"	"34.9"	"100.000"	"36.6811"	"9914"	"9914"	"9887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.1"	""	"36.2"	""	"44.3"	""	"88.4"	""	"59.0"	"55.0"	""	"955"	"41"	"36.000"	"29.000"	"0.00421670652449864"	"16"	"0.0001686"	"0.001254"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMANPPAAVK"	"[R].smANPPAAVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"730.42047"	"1459.83367"	"1459.83431"	"-0.44"	"-0.00032"	"10/84"	"10"	"84"	"360289.981079102"	"HCD"	"MS2"	"100"	"25.5"	"100.000"	"36.5415"	"9895"	"9895"	"9870"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.1"	""	"27.6"	""	"34.2"	""	"57.9"	""	"51.4"	"45.4"	""	"942"	"23"	"36.000"	"29.000"	"0.211359078658505"	"15"	"0.001453"	"0.01174"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"487.28842"	"1459.85071"	"1459.85206"	"-0.93"	"-0.00045"	"7/82"	"7"	"82"	"2950805.80725098"	"HCD"	"MS2"	"23.5284"	"94.9"	"100.000"	"63.0851"	"20633"	"20633"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.1"	""	"130.5"	""	"121.2"	""	"152.1"	""	"179.0"	"179.3"	""	"908"	"33"	"36.000"	"29.000"	"0.0215802192578034"	""	"9.9E-05"	"0.0004643"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"487.28867"	"1459.85144"	"1459.85206"	"-0.42"	"-0.00021"	"5/82"	"5"	"82"	"3532284.45043945"	"HCD"	"MS2"	"23.79623"	"110.3"	"100.000"	"62.9591"	"20614"	"20614"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.0"	""	"152.6"	""	"135.6"	""	"182.1"	""	"213.8"	"208.8"	""	"881"	"33"	"36.000"	"29.000"	"0.0221792018171072"	""	"9.9E-05"	"0.0004151"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"730.42975"	"1459.85222"	"1459.85206"	"0.11"	"0.00008"	"14/82"	"14"	"82"	"1076892.48736572"	"HCD"	"MS2"	"13.36239"	"91.3"	"100.000"	"62.6160"	"20475"	"20475"	"20452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.4"	""	"116.3"	""	"109.5"	""	"157.9"	"0.3"	"169.1"	"162.3"	""	"874"	"42"	"36.000"	"29.000"	"0.00266981664883735"	"29"	"0"	"5.482E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"730.42975"	"1459.85222"	"1459.85206"	"0.11"	"0.00008"	"8/82"	"8"	"82"	"2238681.06939697"	"HCD"	"MS2"	"1.239068"	"189.1"	"100.000"	"63.1782"	"20703"	"20703"	"20689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"312.2"	""	"217.6"	""	"228.4"	""	"320.9"	"0.4"	"341.8"	"370.4"	""	"874"	"54"	"36.000"	"29.000"	"0.000181752936785888"	""	"0"	"4.53E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5849"	"0.0000"	"1"	"1"	"1"	"730.42975"	"1459.85222"	"1459.85206"	"0.11"	"0.00008"	"8/82"	"8"	"82"	"6189518.77355957"	"HCD"	"MS2"	"0"	"435.8"	"100.000"	"62.9062"	"20593"	"20593"	"20576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"676.5"	"3.4"	"492.8"	""	"534.6"	""	"741.1"	""	"800.6"	"885.9"	""	"874"	"53"	"36.000"	"29.000"	"0.00021304995017518"	""	"0"	"0.0003389"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6909"	"0.0000"	"1"	"1"	"1"	"730.42981"	"1459.85234"	"1459.85206"	"0.19"	"0.00014"	"8/82"	"8"	"82"	"1537732.47955322"	"HCD"	"MS2"	"0"	"133.0"	"100.000"	"62.7005"	"20476"	"20476"	"20456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"222.8"	""	"169.1"	""	"163.4"	""	"214.8"	"0.1"	"240.3"	"249.1"	""	"873"	"55"	"36.000"	"29.000"	"0.000125887975111476"	""	"0"	"5.49E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6078"	"0.0000"	"1"	"1"	"1"	"730.42987"	"1459.85246"	"1459.85206"	"0.27"	"0.00020"	"8/82"	"8"	"82"	"6135704.8447876"	"HCD"	"MS2"	"0"	"455.6"	"100.000"	"62.9885"	"20594"	"20594"	"20577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"712.1"	""	"512.5"	""	"550.9"	""	"766.8"	""	"859.1"	"922.1"	""	"873"	"51"	"36.000"	"29.000"	"0.000326575986973119"	""	"0"	"0.0002273"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQGIEEALK"	"[K].nQGIEEALk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.6531"	"0.0000"	"1"	"1"	"1"	"730.43042"	"1459.85356"	"1459.85206"	"1.03"	"0.00075"	"8/82"	"8"	"82"	"1456750.9619751"	"HCD"	"MS2"	"1.757752"	"130.0"	"100.000"	"63.2923"	"20717"	"20717"	"20699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.4"	""	"160.8"	""	"165.4"	""	"213.6"	""	"234.3"	"257.4"	""	"875"	"49"	"36.000"	"29.000"	"0.000546988325720252"	""	"0"	"4.396E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"730.44147"	"1459.87566"	"1459.87722"	"-1.07"	"-0.00078"	"7/78"	"7"	"78"	"794258.624206543"	"HCD"	"MS2"	"10.58555"	"52.1"	"100.000"	"79.0340"	"27101"	"27101"	"27088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.2"	""	"42.6"	""	"59.6"	""	"125.8"	"0.3"	"119.5"	"99.9"	""	"799"	"44"	"36.000"	"29.000"	"0.0015686165169214"	"27"	"0"	"0.0003421"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"487.29678"	"1459.87580"	"1459.87722"	"-0.97"	"-0.00047"	"8/78"	"8"	"78"	"1313695.97491455"	"HCD"	"MS2"	"13.4843"	"41.3"	"100.000"	"78.6721"	"26954"	"26954"	"26929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	""	"37.7"	""	"43.7"	""	"88.6"	""	"96.4"	"84.9"	""	"799"	"38"	"36.000"	"29.000"	"0.0065390820031041"	"25"	"0.0001991"	"0.002216"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEILEEIAK"	"[R].gEILEEIAk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66H68"	"RNA-binding protein 47 OS=Rattus norvegicus OX=10116 GN=Rbm47 PE=2 SV=1"	"Q66H68"	"RNA-binding protein 47 OS=Rattus norvegicus OX=10116 GN=Rbm47 PE=2 SV=1"	"0"	"2"	"2"	"0.3478"	"0.0000"	"1"	"1"	"1"	"730.44177"	"1459.87627"	"1459.87722"	"-0.65"	"-0.00047"	"8/72"	"8"	"72"	"118624.979980469"	"HCD"	"MS2"	"15.39718"	"9.8"	"100.000"	"102.6730"	"36670"	"36670"	"36652"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.8"	""	"10.1"	""	"18.3"	""	"11.3"	""	"21.1"	"19.4"	""	"767"	"23"	"35.000"	"28.000"	"0.210748925124399"	"28"	"0.004819"	"0.05754"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.5429"	"0.0000"	"1"	"1"	"1"	"730.44177"	"1459.87627"	"1459.87722"	"-0.65"	"-0.00047"	"11/78"	"11"	"78"	"277793.562438965"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"78.4183"	"26851"	"26851"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"15.1"	""	"24.0"	""	"43.4"	""	"46.1"	"34.3"	""	"767"	"35"	"35.000"	"28.000"	"0.0132973582148546"	""	"9.9E-05"	"0.0004987"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"487.29694"	"1459.87625"	"1459.87722"	"-0.66"	"-0.00032"	"8/78"	"8"	"78"	"1034051.36260986"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"79.0986"	"27154"	"27154"	"27134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.2"	""	"30.4"	""	"42.3"	""	"83.1"	""	"81.4"	"69.1"	""	"767"	"34"	"35.000"	"28.000"	"0.0150233009870835"	"23"	"0.0001686"	"0.001913"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"487.29700"	"1459.87644"	"1459.87722"	"-0.53"	"-0.00026"	"8/78"	"8"	"78"	"1107406.56738281"	"HCD"	"MS2"	"12.05589"	"37.8"	"100.000"	"78.7342"	"27006"	"27006"	"26983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"37.9"	""	"34.9"	""	"92.5"	""	"81.8"	"76.8"	""	"767"	"38"	"35.000"	"28.000"	"0.00596712819720546"	"24"	"9.9E-05"	"0.000846"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"487.29712"	"1459.87680"	"1459.87722"	"-0.28"	"-0.00014"	"8/78"	"8"	"78"	"990185.64630127"	"HCD"	"MS2"	"5.399669"	"35.2"	"100.000"	"78.9672"	"27074"	"27074"	"27056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"33.4"	""	"37.7"	""	"77.2"	""	"82.6"	"70.0"	""	"775"	"40"	"35.000"	"28.000"	"0.00370912702626752"	"26"	"0.0001991"	"0.002103"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.6047"	"0.0000"	"1"	"1"	"1"	"730.44208"	"1459.87688"	"1459.87722"	"-0.23"	"-0.00017"	"7/78"	"7"	"78"	"882706.818359375"	"HCD"	"MS2"	"7.319349"	"60.8"	"100.000"	"79.1305"	"27167"	"27167"	"27150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.7"	""	"46.3"	""	"66.1"	""	"141.1"	""	"155.1"	"116.1"	""	"773"	"43"	"35.000"	"28.000"	"0.0021684504273655"	""	"9.9E-05"	"0.0004551"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"730.44214"	"1459.87700"	"1459.87722"	"-0.15"	"-0.00011"	"7/78"	"7"	"78"	"1562292.45825195"	"HCD"	"MS2"	"0"	"97.3"	"100.000"	"78.7344"	"26979"	"26979"	"26961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.0"	""	"73.5"	""	"93.1"	""	"262.7"	"0.5"	"226.3"	"180.2"	""	"773"	"47"	"35.000"	"28.000"	"0.000835890709420494"	""	"9.9E-05"	"0.0008442"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"730.44250"	"1459.87773"	"1459.87722"	"0.35"	"0.00026"	"7/78"	"7"	"78"	"1587106.47570801"	"HCD"	"MS2"	"1.727904"	"103.6"	"100.000"	"78.8402"	"27049"	"27049"	"27031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.0"	""	"86.9"	""	"108.1"	""	"264.5"	"0.5"	"248.8"	"190.4"	""	"767"	"45"	"35.000"	"28.000"	"0.00122960428594785"	""	"9.9E-05"	"0.0009021"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVVTLPETK"	"[K].dVVTLPETk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"730.44257"	"1459.87786"	"1459.87722"	"0.44"	"0.00032"	"11/78"	"11"	"78"	"317680.856750488"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"78.5519"	"26932"	"26932"	"26903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"22.6"	""	"26.7"	""	"50.6"	"1.0"	"42.6"	"45.7"	""	"767"	"36"	"35.000"	"28.000"	"0.00930604971464106"	"20"	"0.0001991"	"0.001978"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMTEEYK"	"[R].sVmTEEYk.[V]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"730.89142"	"1460.77556"	"1460.77070"	"3.33"	"0.00243"	"7/66"	"7"	"66"	"458146.784118652"	"HCD"	"MS2"	"0"	"37.7"	"100.000"	"41.5516"	"11922"	"11922"	"11894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.4"	""	"43.1"	""	"43.0"	""	"77.4"	"0.4"	"73.5"	"73.7"	""	"894"	"36"	"36.000"	"29.000"	"0.0116763612541645"	"25"	"0.007752"	"0.09929"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"730.90045"	"1460.79363"	"1460.79466"	"-0.71"	"-0.00052"	"6/92"	"6"	"92"	"252473.07598877"	"HCD"	"MS2"	"19.94344"	"15.0"	"100.000"	"110.7944"	"39843"	"39843"	"39820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"13.4"	""	"11.1"	""	"15.2"	""	"17.7"	"62.3"	""	"1012"	"19"	"37.000"	"30.000"	"0.642910497235522"	"17"	"0.0005778"	"0.007147"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"730.90045"	"1460.79363"	"1460.79466"	"-0.71"	"-0.00052"	"7/92"	"7"	"92"	"1794498.41223145"	"HCD"	"MS2"	"15.26983"	"80.0"	"100.000"	"110.4710"	"39711"	"39711"	"39692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.3"	""	"40.6"	""	"34.1"	""	"22.7"	""	"27.6"	"491.7"	""	"1012"	"43"	"37.000"	"30.000"	"0.00237219571365504"	"21"	"0"	"8.09E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNYDIEHVIK"	"[K].TNYDIEHVIk.[K]"	"K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"487.60278"	"1460.79380"	"1460.79466"	"-0.59"	"-0.00029"	"5/98"	"5"	"98"	"487687.049682617"	"HCD"	"MS2"	"14.28253"	"23.9"	"100.000"	"61.5268"	"20034"	"20034"	"20006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"32.8"	""	"33.0"	""	"44.5"	""	"44.7"	"48.6"	""	"1004"	"29"	"37.000"	"30.000"	"0.0678740426723527"	"19"	"0.002189"	"0.02105"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"730.90063"	"1460.79399"	"1460.79466"	"-0.46"	"-0.00033"	"6/92"	"6"	"92"	"250769.510742188"	"HCD"	"MS2"	"24.29674"	"14.7"	"100.000"	"110.6578"	"39774"	"39774"	"39751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"13.3"	""	"17.2"	""	"15.8"	""	"13.9"	"57.7"	""	"1010"	"27"	"37.000"	"30.000"	"0.0973400081161423"	"18"	"0.0001991"	"0.004119"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFDPIIQDR"	"[K].dLFDPIIQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"730.90082"	"1460.79436"	"1460.79466"	"-0.21"	"-0.00015"	"7/92"	"7"	"92"	"1946348.83770752"	"HCD"	"MS2"	"11.54776"	"84.2"	"100.000"	"110.3345"	"39642"	"39642"	"39623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.9"	""	"35.7"	""	"42.6"	""	"26.4"	"0.8"	"28.7"	"507.3"	""	"1011"	"41"	"37.000"	"30.000"	"0.00379945372926203"	"24"	"0"	"8.182E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIFYTSK"	"[R].eDIFYTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652; Q6AYQ2"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1"	"0"	"2"	"2"	"0.5278"	"0.0000"	"1"	"1"	"1"	"730.90540"	"1460.80351"	"1460.80372"	"-0.14"	"-0.00010"	"7/68"	"7"	"68"	"683226.462280273"	"HCD"	"MS2"	"13.77182"	"61.1"	"100.000"	"85.3749"	"29666"	"29666"	"29652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.0"	""	"85.5"	""	"88.2"	""	"83.9"	"0.7"	"113.9"	"116.7"	""	"1017"	"36"	"37.000"	"30.000"	"0.0117568494580429"	""	"0.0001991"	"0.002411"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIFYTSK"	"[R].eDIFYTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652; Q6AYQ2"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"730.90552"	"1460.80376"	"1460.80372"	"0.03"	"0.00002"	"7/68"	"7"	"68"	"533295.388916016"	"HCD"	"MS2"	"0"	"52.7"	"100.000"	"85.4617"	"29731"	"29731"	"29713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.3"	""	"66.0"	""	"82.7"	""	"75.0"	""	"100.2"	"96.1"	""	"1009"	"39"	"37.000"	"30.000"	"0.00685269133803218"	""	"0.0001686"	"0.001115"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDIFYTSK"	"[R].eDIFYTSk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"3"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652; Q6AYQ2"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"730.90613"	"1460.80498"	"1460.80372"	"0.86"	"0.00063"	"7/68"	"7"	"68"	"743580.798278809"	"HCD"	"MS2"	"13.78431"	"53.1"	"100.000"	"85.1392"	"29600"	"29600"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.1"	""	"77.0"	""	"81.6"	""	"79.7"	""	"94.2"	"89.6"	""	"1012"	"15"	"37.000"	"30.000"	"1.67938595521621"	"25"	"0.001049"	"0.008688"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLGPNGLDK"	"[R].tSLGPnGLDk.[M]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"730.92114"	"1460.83501"	"1460.83608"	"-0.73"	"-0.00054"	"8/96"	"8"	"96"	"863424.136474609"	"HCD"	"MS2"	"21.96948"	"69.3"	"100.000"	"67.5210"	"22432"	"22432"	"22418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.1"	""	"82.7"	""	"90.7"	""	"113.6"	"0.1"	"143.5"	"120.4"	""	"963"	"53"	"36.000"	"29.000"	"0.000250955253397096"	"23"	"9.9E-05"	"0.0008304"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLGPNGLDK"	"[R].tSLGPnGLDk.[M]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"487.61655"	"1460.83509"	"1460.83608"	"-0.68"	"-0.00033"	"10/96"	"10"	"96"	"1124899.42633057"	"HCD"	"MS2"	"29.18631"	"57.1"	"100.000"	"67.7226"	"22545"	"22545"	"22525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.0"	""	"70.0"	""	"64.8"	""	"105.9"	"0.6"	"118.0"	"109.7"	""	"937"	"29"	"36.000"	"29.000"	"0.0529309386024206"	"16"	"0.0001991"	"0.003499"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLGPNGLDK"	"[R].tSLGPnGLDk.[M]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"730.92139"	"1460.83550"	"1460.83608"	"-0.40"	"-0.00029"	"15/96"	"15"	"96"	"1710779.90942383"	"HCD"	"MS2"	"2.690749"	"131.1"	"100.000"	"67.8183"	"22553"	"22553"	"22536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.9"	""	"160.2"	""	"156.3"	""	"235.5"	""	"255.3"	"266.1"	""	"935"	"56"	"36.000"	"29.000"	"0.000114230378338443"	"25"	"0"	"7.666E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLGPNGLDK"	"[R].tSLGPnGLDk.[M]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"730.92157"	"1460.83586"	"1460.83608"	"-0.15"	"-0.00011"	"9/96"	"9"	"96"	"1644173.76025391"	"HCD"	"MS2"	"1.893304"	"82.5"	"100.000"	"67.8124"	"22581"	"22581"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.1"	""	"95.1"	""	"108.0"	""	"138.0"	"1.2"	"167.3"	"165.1"	""	"940"	"53"	"36.000"	"29.000"	"0.000260074551331396"	"25"	"0"	"5.606E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLGPNGLDK"	"[R].tSLGPnGLDk.[M]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"487.61682"	"1460.83591"	"1460.83608"	"-0.12"	"-0.00006"	"10/96"	"10"	"96"	"1341795.26660156"	"HCD"	"MS2"	"47.44785"	"69.0"	"100.000"	"67.6984"	"22504"	"22504"	"22483"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.5"	""	"75.6"	""	"87.2"	""	"125.7"	""	"140.8"	"126.1"	""	"937"	"32"	"36.000"	"29.000"	"0.0310248431984276"	"16"	"0.0001991"	"0.002131"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSLGPNGLDK"	"[R].tSLGPnGLDk.[M]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"Q68FQ0"	"T-complex protein 1 subunit epsilon OS=Rattus norvegicus OX=10116 GN=Cct5 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"730.92169"	"1460.83611"	"1460.83608"	"0.02"	"0.00001"	"8/96"	"8"	"96"	"485180.250427246"	"HCD"	"MS2"	"16.85038"	"43.3"	"100.000"	"67.5176"	"22462"	"22462"	"22448"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.0"	""	"54.6"	""	"55.7"	""	"74.1"	""	"87.5"	"78.8"	""	"924"	"37"	"36.000"	"29.000"	"0.0101541126122659"	"21"	"0.0001686"	"0.001325"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAVEELSK"	"[K].qVAVEELSk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"730.93878"	"1460.87029"	"1460.87247"	"-1.49"	"-0.00109"	"8/86"	"8"	"86"	"311167.268493652"	"HCD"	"MS2"	"36.47698"	"28.9"	"100.000"	"68.8456"	"22969"	"22969"	"22942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.2"	""	"37.9"	""	"35.3"	""	"17.5"	""	"55.2"	"76.6"	""	"863"	"54"	"36.000"	"29.000"	"0.000156668180633299"	"19"	"0"	"1.364E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAVEELSK"	"[K].qVAVEELSk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"Q6AY80"	"Ribosyldihydronicotinamide dehydrogenase [quinone] OS=Rattus norvegicus OX=10116 GN=Nqo2 PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"730.93896"	"1460.87065"	"1460.87247"	"-1.24"	"-0.00091"	"13/86"	"13"	"86"	"340660.327880859"	"HCD"	"MS2"	"12.23265"	"34.0"	"100.000"	"68.9784"	"23057"	"23057"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.0"	""	"48.5"	""	"33.0"	""	"16.6"	"1.0"	"76.3"	"84.7"	""	"877"	"46"	"36.000"	"29.000"	"0.00102086801648611"	"19"	"0"	"6.632E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVGDEQLTK"	"[K].iVGDEQLTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"730.93903"	"1460.87078"	"1460.87247"	"-1.16"	"-0.00085"	"7/78"	"7"	"78"	"615401.938171387"	"HCD"	"MS2"	"51.18682"	"56.3"	"100.000"	"71.6813"	"24122"	"24122"	"24100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.8"	""	"73.8"	""	"75.0"	""	"94.8"	""	"104.6"	"112.4"	""	"877"	"14"	"36.000"	"29.000"	"1.84488626546579"	"21"	"0.004213"	"0.04634"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITEDVQGK"	"[K].lITEDVQGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"487.62848"	"1460.87088"	"1460.87247"	"-1.08"	"-0.00053"	"8/72"	"8"	"72"	"1873469.5581665"	"HCD"	"MS2"	"20.99249"	"74.8"	"100.000"	"72.4272"	"24451"	"24451"	"24432"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.8"	""	"97.5"	""	"105.3"	""	"125.6"	"0.7"	"150.2"	"127.9"	""	"877"	"15"	"36.000"	"29.000"	"1.41569467237099"	"23"	"0.001615"	"0.01372"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVGDEQLTK"	"[K].iVGDEQLTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"730.93933"	"1460.87139"	"1460.87247"	"-0.74"	"-0.00054"	"6/78"	"6"	"78"	"968661.059326172"	"HCD"	"MS2"	"4.917631"	"84.3"	"100.000"	"71.9759"	"24242"	"24242"	"24223"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.3"	""	"103.7"	""	"109.3"	""	"153.7"	"0.0"	"155.9"	"142.2"	""	"877"	"26"	"36.000"	"29.000"	"0.114279833167452"	""	"9.9E-05"	"0.000692"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVGDEQLTK"	"[K].iVGDEQLTk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"730.93951"	"1460.87175"	"1460.87247"	"-0.49"	"-0.00036"	"14/78"	"14"	"78"	"647641.180969238"	"HCD"	"MS2"	"25.78023"	"58.6"	"100.000"	"71.7868"	"24196"	"24196"	"24171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.8"	""	"77.3"	""	"71.8"	""	"92.4"	""	"107.0"	"117.3"	""	"855"	"48"	"36.000"	"29.000"	"0.000666708694958523"	""	"9.9E-05"	"0.0005895"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITEDVQGK"	"[K].lITEDVQGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"730.93958"	"1460.87187"	"1460.87247"	"-0.41"	"-0.00030"	"8/72"	"8"	"72"	"2222494.87976074"	"HCD"	"MS2"	"0"	"181.4"	"100.000"	"72.2666"	"24356"	"24356"	"24336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"274.4"	""	"242.0"	""	"276.5"	""	"307.0"	""	"337.4"	"280.7"	""	"855"	"53"	"36.000"	"29.000"	"0.000195855656570463"	"24"	"0"	"3.89E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAEQLAEK"	"[K].tIAEQLAEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"730.93964"	"1460.87200"	"1460.87247"	"-0.32"	"-0.00023"	"7/86"	"7"	"86"	"163943.843017578"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"77.9899"	"26676"	"26676"	"26653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"20.3"	""	"19.8"	""	"28.5"	"0.9"	"29.0"	"30.8"	""	"859"	"34"	"36.000"	"29.000"	"0.0174165915975081"	"25"	"0.0001686"	"0.001183"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESLNVDVVK"	"[R].eSLNVDVVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"730.93976"	"1460.87224"	"1460.87247"	"-0.15"	"-0.00011"	"7/84"	"7"	"84"	"220705.902038574"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"80.3909"	"27680"	"27680"	"27660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"34.6"	""	"27.2"	""	"32.1"	"0.6"	"46.1"	"37.8"	""	"859"	"40"	"36.000"	"29.000"	"0.00388117448963729"	"26"	"0.0001991"	"0.002526"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITEDVQGK"	"[K].lITEDVQGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"730.94006"	"1460.87285"	"1460.87247"	"0.26"	"0.00019"	"8/72"	"8"	"72"	"684575.995422363"	"HCD"	"MS2"	"24.68435"	"61.0"	"100.000"	"72.5841"	"24485"	"24485"	"24464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.1"	""	"72.5"	""	"89.9"	""	"104.5"	"0.9"	"110.5"	"100.6"	""	"855"	"39"	"36.000"	"29.000"	"0.00495377319756317"	"21"	"0"	"0.0002232"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITEDVQGK"	"[K].lITEDVQGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"730.94019"	"1460.87309"	"1460.87247"	"0.43"	"0.00031"	"8/72"	"8"	"72"	"698438.793640137"	"HCD"	"MS2"	"21.92126"	"60.3"	"100.000"	"72.6914"	"24558"	"24558"	"24536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.6"	""	"66.7"	""	"97.9"	""	"107.5"	""	"109.4"	"108.5"	""	"856"	"38"	"36.000"	"29.000"	"0.00703791097535991"	"22"	"0"	"0.0003199"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITEDVQGK"	"[K].lITEDVQGk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"P49242"	"40S ribosomal protein S3a OS=Rattus norvegicus OX=10116 GN=Rps3a PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"730.94025"	"1460.87322"	"1460.87247"	"0.51"	"0.00038"	"14/72"	"14"	"72"	"2366063.62451172"	"HCD"	"MS2"	"0"	"181.6"	"100.000"	"72.3907"	"24436"	"24436"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"283.8"	""	"239.8"	""	"271.5"	""	"303.2"	"1.8"	"326.3"	"291.6"	""	"860"	"42"	"36.000"	"29.000"	"0.00245735813768903"	"24"	"0"	"0.0001136"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAEQLAEK"	"[K].tIAEQLAEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"730.94080"	"1460.87432"	"1460.87247"	"1.27"	"0.00092"	"7/86"	"7"	"86"	"166071.962646484"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"78.0960"	"26746"	"26746"	"26726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.1"	""	"19.5"	""	"17.8"	""	"26.0"	""	"32.0"	"34.8"	""	"847"	"40"	"36.000"	"29.000"	"0.00422525977028851"	"26"	"0"	"0.0002111"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKAEGSEIR"	"[K].lkAEGSEIR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.63300"	"1460.88443"	"1460.88370"	"0.50"	"0.00024"	"6/84"	"6"	"84"	"7926043.32366943"	"HCD"	"MS2"	"59.77978"	"441.1"	"100.000"	"37.3980"	"10206"	"10206"	"10187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"727.9"	""	"679.6"	""	"688.1"	""	"635.9"	""	"704.9"	"735.9"	""	"769"	"4"	"35.000"	"28.000"	"14.3845521190604"	"13"	"0.003317"	"0.03614"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKAEGSEIR"	"[K].lkAEGSEIR.[L]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"487.63318"	"1460.88498"	"1460.88370"	"0.88"	"0.00043"	"6/84"	"6"	"84"	"7851877.53234863"	"HCD"	"MS2"	"59.52855"	"424.4"	"100.000"	"37.3365"	"10218"	"10218"	"10200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"711.9"	""	"642.6"	""	"662.9"	""	"619.2"	"0.4"	"677.5"	"696.7"	""	"769"	"7"	"35.000"	"28.000"	"7.77850874201795"	"13"	"0.004213"	"0.04746"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39142"	"1461.77556"	"1461.77868"	"-2.13"	"-0.00156"	"5/88"	"5"	"88"	"169533.473388672"	"HCD"	"MS2"	"10.02294"	"11.6"	"100.000"	"111.6195"	"40166"	"40166"	"40135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"11.8"	""	"14.5"	""	"17.9"	""	"19.5"	"30.6"	""	"904"	"19"	"36.000"	"29.000"	"0.522562733470828"	"18"	"0.001615"	"0.01345"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39142"	"1461.77556"	"1461.77868"	"-2.13"	"-0.00156"	"5/92"	"5"	"92"	"169533.473388672"	"HCD"	"MS2"	"10.02294"	"11.6"	"100.000"	"111.6195"	"40166"	"40166"	"40135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"11.8"	""	"14.5"	""	"17.9"	""	"19.5"	"30.6"	""	"904"	"19"	"36.000"	"29.000"	"0.522562733470828"	"18"	"0.001615"	"0.01345"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39240"	"1461.77751"	"1461.77868"	"-0.80"	"-0.00058"	"10/88"	"10"	"88"	"6072040.67010498"	"HCD"	"MS2"	"0"	"244.1"	"100.000"	"111.3328"	"40062"	"40062"	"40044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.3"	""	"217.8"	""	"272.8"	""	"450.4"	"3.3"	"570.7"	"504.1"	""	"915"	"57"	"36.000"	"29.000"	"9.21278844312043E-05"	""	"0"	"1.093E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39240"	"1461.77751"	"1461.77868"	"-0.80"	"-0.00058"	"10/92"	"10"	"92"	"6072040.67010498"	"HCD"	"MS2"	"0"	"244.1"	"100.000"	"111.3328"	"40062"	"40062"	"40044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.3"	""	"217.8"	""	"272.8"	""	"450.4"	"3.3"	"570.7"	"504.1"	""	"915"	"57"	"36.000"	"29.000"	"9.21278844312043E-05"	""	"0"	"1.093E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39264"	"1461.77800"	"1461.77868"	"-0.46"	"-0.00034"	"10/88"	"10"	"88"	"6165841.00305176"	"HCD"	"MS2"	"0"	"239.3"	"100.000"	"111.2358"	"40009"	"40009"	"39991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.8"	""	"211.6"	""	"256.5"	""	"470.3"	"3.9"	"543.3"	"486.6"	""	"911"	"57"	"36.000"	"29.000"	"9.25738618481449E-05"	""	"0"	"4.643E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39264"	"1461.77800"	"1461.77868"	"-0.46"	"-0.00034"	"10/92"	"10"	"92"	"6165841.00305176"	"HCD"	"MS2"	"0"	"239.3"	"100.000"	"111.2358"	"40009"	"40009"	"39991"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.8"	""	"211.6"	""	"256.5"	""	"470.3"	"3.9"	"543.3"	"486.6"	""	"911"	"57"	"36.000"	"29.000"	"9.25738618481449E-05"	""	"0"	"4.643E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DLFDPIIEDR"	"[K].dLFDPIIEDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"731.39270"	"1461.77812"	"1461.77868"	"-0.38"	"-0.00028"	"5/88"	"5"	"88"	"196699.320739746"	"HCD"	"MS2"	"9.021439"	"12.8"	"100.000"	"111.6727"	"40201"	"40201"	"40172"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"12.2"	""	"15.9"	""	"21.6"	""	"27.3"	"22.8"	""	"913"	"32"	"36.000"	"29.000"	"0.0293386942955219"	"29"	"9.9E-05"	"0.0009419"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DLFDPIIQDR"	"[K].dLFDPIIqDR.[H]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"731.39270"	"1461.77812"	"1461.77868"	"-0.38"	"-0.00028"	"5/92"	"5"	"92"	"196699.320739746"	"HCD"	"MS2"	"9.021439"	"12.8"	"100.000"	"111.6727"	"40201"	"40201"	"40172"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"12.2"	""	"15.9"	""	"21.6"	""	"27.3"	"22.8"	""	"913"	"32"	"36.000"	"29.000"	"0.0293386942955219"	"29"	"9.9E-05"	"0.0009419"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEAWVLETAGR"	"[R].tEAWVLETAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYR8"	"Secernin-2 OS=Rattus norvegicus OX=10116 GN=Scrn2 PE=2 SV=1"	"Q6AYR8"	"Secernin-2 OS=Rattus norvegicus OX=10116 GN=Scrn2 PE=2 SV=1"	"0"	"2"	"2"	"0.7073"	"0.0000"	"1"	"1"	"1"	"731.39911"	"1461.79094"	"1461.78991"	"0.71"	"0.00052"	"6/94"	"6"	"94"	"290567.17364502"	"HCD"	"MS2"	"35.14239"	"21.5"	"100.000"	"91.4223"	"32130"	"32130"	"32109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	""	"25.6"	""	"27.8"	""	"38.2"	"1.5"	"39.9"	"42.0"	""	"1032"	"41"	"37.000"	"30.000"	"0.00373808955398695"	"27"	"0"	"0.0001048"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEAWVLETAGR"	"[R].tEAWVLETAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYR8"	"Secernin-2 OS=Rattus norvegicus OX=10116 GN=Scrn2 PE=2 SV=1"	"Q6AYR8"	"Secernin-2 OS=Rattus norvegicus OX=10116 GN=Scrn2 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"731.39960"	"1461.79192"	"1461.78991"	"1.37"	"0.00100"	"11/94"	"11"	"94"	"265900.116516113"	"HCD"	"MS2"	"27.9713"	"19.8"	"100.000"	"91.4623"	"32110"	"32110"	"32089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"26.8"	""	"29.1"	""	"30.7"	""	"31.3"	"40.1"	""	"1023"	"25"	"37.000"	"30.000"	"0.149570394126687"	"18"	"0.0001991"	"0.002123"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"487.95334"	"1461.84546"	"1461.84659"	"-0.77"	"-0.00037"	"6/78"	"6"	"78"	"1923909.29003906"	"HCD"	"MS2"	"39.40632"	"69.8"	"100.000"	"70.7459"	"23774"	"23774"	"23757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.8"	""	"88.4"	""	"86.3"	""	"116.8"	""	"130.1"	"144.1"	""	"959"	"30"	"36.000"	"29.000"	"0.0500943345116373"	"24"	"9.9E-05"	"0.0007317"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"731.42639"	"1461.84551"	"1461.84659"	"-0.74"	"-0.00054"	"7/78"	"7"	"78"	"308620.180236816"	"HCD"	"MS2"	"9.558161"	"28.6"	"100.000"	"71.0434"	"23862"	"23862"	"23838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"35.1"	""	"38.9"	""	"42.4"	"1.2"	"55.5"	"59.4"	""	"959"	"33"	"36.000"	"29.000"	"0.0248192475920297"	"28"	"0.001348"	"0.0111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"731.42639"	"1461.84551"	"1461.84659"	"-0.74"	"-0.00054"	"8/78"	"8"	"78"	"612851.600830078"	"HCD"	"MS2"	"3.768057"	"49.8"	"100.000"	"71.0591"	"23900"	"23900"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.4"	""	"63.2"	""	"59.7"	""	"80.8"	"1.0"	"104.5"	"101.2"	""	"959"	"50"	"36.000"	"29.000"	"0.000432303360482056"	""	"0"	"7.823E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"487.95337"	"1461.84555"	"1461.84659"	"-0.71"	"-0.00034"	"6/78"	"6"	"78"	"1272685.62744141"	"HCD"	"MS2"	"18.25568"	"45.6"	"100.000"	"71.0683"	"23904"	"23904"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.6"	""	"53.1"	""	"62.9"	""	"73.9"	""	"82.8"	"94.2"	""	"959"	"35"	"36.000"	"29.000"	"0.0165115791801021"	"27"	"0"	"0.0001017"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"487.95340"	"1461.84565"	"1461.84659"	"-0.64"	"-0.00031"	"7/78"	"7"	"78"	"2311633.66772461"	"HCD"	"MS2"	"33.04886"	"80.8"	"100.000"	"70.6909"	"23719"	"23719"	"23696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.3"	""	"87.7"	""	"107.5"	""	"139.7"	""	"162.0"	"159.2"	""	"955"	"43"	"36.000"	"29.000"	"0.00244891310855877"	"28"	"0"	"0.0002551"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"731.42664"	"1461.84599"	"1461.84659"	"-0.40"	"-0.00030"	"8/78"	"8"	"78"	"943155.303161621"	"HCD"	"MS2"	"11.22291"	"84.3"	"100.000"	"70.7479"	"23775"	"23775"	"23757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.1"	""	"113.0"	""	"100.8"	""	"143.6"	""	"176.5"	"155.5"	""	"956"	"50"	"36.000"	"29.000"	"0.000437953394278316"	""	"0"	"1.368E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGFAGDQIPK"	"[K].aGFAGDQIPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"P85515"	"Alpha-centractin OS=Rattus norvegicus OX=10116 GN=Actr1a PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"731.42706"	"1461.84685"	"1461.84659"	"0.18"	"0.00013"	"8/78"	"8"	"78"	"1173432.60009766"	"HCD"	"MS2"	"7.959718"	"97.5"	"100.000"	"70.7211"	"23731"	"23731"	"23712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.2"	""	"118.4"	""	"121.0"	""	"166.7"	""	"201.7"	"194.1"	""	"935"	"56"	"36.000"	"29.000"	"0.000127286286152642"	""	"0"	"4.429E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALLNSK"	"[K].dLEALLnSk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.4118"	"0.0000"	"1"	"1"	"3"	"487.95660"	"1461.85526"	"1461.85648"	"-0.84"	"-0.00041"	"5/82"	"5"	"82"	"819438.097473145"	"HCD"	"MS2"	"20.50828"	"27.4"	"100.000"	"104.8087"	"37521"	"37521"	"37510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"31.1"	""	"34.9"	""	"41.7"	"0.3"	"54.7"	"54.4"	""	"941"	"17"	"36.000"	"29.000"	"0.90481465845223"	"23"	"0.001348"	"0.01112"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALLNSK"	"[K].dLEALLnSk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"487.95673"	"1461.85562"	"1461.85648"	"-0.59"	"-0.00029"	"5/82"	"5"	"82"	"804735.23236084"	"HCD"	"MS2"	"30.64995"	"25.9"	"100.000"	"104.5712"	"37407"	"37407"	"37387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"30.2"	""	"30.0"	""	"47.0"	""	"45.0"	"47.2"	""	"922"	"20"	"36.000"	"29.000"	"0.424327252578212"	"24"	"0.001453"	"0.01184"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALLNSK"	"[K].dLEALLnSk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"731.43231"	"1461.85735"	"1461.85648"	"0.59"	"0.00043"	"6/82"	"6"	"82"	"261084.378112793"	"HCD"	"MS2"	"32.70726"	"17.0"	"100.000"	"104.3576"	"37324"	"37324"	"37307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"22.8"	""	"18.3"	""	"27.7"	""	"29.1"	"34.2"	""	"934"	"28"	"36.000"	"29.000"	"0.0662699862628806"	"26"	"0.0009352"	"0.008183"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEALLNSK"	"[K].dLEALLnSk.[E]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"731.43231"	"1461.85735"	"1461.85648"	"0.59"	"0.00043"	"6/82"	"6"	"82"	"440095.724853516"	"HCD"	"MS2"	"32.42137"	"28.8"	"100.000"	"104.6557"	"37461"	"37461"	"37447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.4"	""	"39.6"	""	"39.2"	""	"43.4"	"0.8"	"45.5"	"51.5"	""	"934"	"22"	"36.000"	"29.000"	"0.285967632935469"	"22"	"0.001615"	"0.01432"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYDFYPK"	"[K].nGYDFYPk.[A]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"488.25848"	"1462.76090"	"1462.76185"	"-0.65"	"-0.00032"	"5/70"	"5"	"70"	"412346.306335449"	"HCD"	"MS2"	"41.90013"	"15.7"	"100.000"	"88.7726"	"31067"	"31067"	"31036"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.8"	""	"20.4"	""	"19.2"	""	"30.7"	""	"26.3"	"34.8"	""	"851"	"7"	"36.000"	"29.000"	"8.68759495456885"	"18"	"0.006033"	"0.0738"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYDFYPK"	"[K].nGYDFYPk.[A]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"Q64560"	"Tripeptidyl-peptidase 2 OS=Rattus norvegicus OX=10116 GN=Tpp2 PE=2 SV=3"	"0"	"3"	"3"	"0.2857"	"0.0000"	"1"	"1"	"1"	"488.25876"	"1462.76172"	"1462.76185"	"-0.09"	"-0.00004"	"5/70"	"5"	"70"	"364302.50567627"	"HCD"	"MS2"	"20.8805"	"15.7"	"100.000"	"88.8407"	"31055"	"31055"	"31025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.1"	""	"19.9"	""	"26.6"	""	"24.4"	""	"25.5"	"33.1"	""	"844"	"7"	"36.000"	"29.000"	"9.36078889155693"	"18"	"0.002628"	"0.02754"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"731.88977"	"1462.77226"	"1462.77392"	"-1.13"	"-0.00083"	"9/94"	"9"	"94"	"508302.749816895"	"HCD"	"MS2"	"5.744903"	"27.4"	"100.000"	"81.5764"	"28133"	"28133"	"28120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.1"	""	"33.4"	""	"38.9"	""	"41.4"	""	"59.9"	"56.9"	""	"912"	"37"	"36.000"	"29.000"	"0.00833613698561089"	"20"	"9.9E-05"	"0.0005552"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"731.88995"	"1462.77263"	"1462.77392"	"-0.88"	"-0.00065"	"13/94"	"13"	"94"	"831927.664794922"	"HCD"	"MS2"	"3.029244"	"36.8"	"100.000"	"81.2880"	"28017"	"28017"	"27998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.0"	""	"47.3"	""	"53.1"	""	"60.5"	""	"76.7"	"63.4"	""	"905"	"42"	"36.000"	"29.000"	"0.00259190204021088"	"18"	"0.0001991"	"0.004325"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.89008"	"1462.77287"	"1462.77392"	"-0.72"	"-0.00052"	"12/94"	"12"	"94"	"504425.815856934"	"HCD"	"MS2"	"7.015009"	"29.0"	"100.000"	"81.6405"	"28187"	"28187"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"40.4"	""	"30.5"	""	"47.3"	""	"58.8"	"61.7"	""	"907"	"37"	"36.000"	"29.000"	"0.00909028064410101"	"15"	"9.9E-05"	"0.0004355"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLPSGLDDYPR"	"[K].tLPSGLDDYPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"731.89044"	"1462.77361"	"1462.77392"	"-0.22"	"-0.00016"	"10/94"	"10"	"94"	"842675.918151855"	"HCD"	"MS2"	"5.60405"	"38.2"	"100.000"	"81.3547"	"28071"	"28071"	"28055"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.4"	""	"57.4"	""	"48.8"	""	"57.0"	""	"76.2"	"73.4"	""	"915"	"49"	"36.000"	"29.000"	"0.00064623592666491"	"21"	"0"	"5.874E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"366.44891"	"1462.77382"	"1462.77526"	"-0.98"	"-0.00036"	"6/80"	"6"	"80"	"1953169.59899902"	"HCD"	"MS2"	"7.015533"	"52.0"	"100.000"	"34.6537"	"9134"	"9134"	"9104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.7"	""	"66.6"	""	"65.1"	""	"85.1"	"1.8"	"99.6"	"110.8"	""	"915"	"24"	"36.000"	"29.000"	"0.192039735175886"	"14"	"0.002525"	"0.02451"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"4"	"4"	"0.9600"	"0.0000"	"1"	"1"	"1"	"366.44894"	"1462.77395"	"1462.77526"	"-0.90"	"-0.00033"	"6/80"	"6"	"80"	"2913117.54528809"	"HCD"	"MS2"	"14.43194"	"67.4"	"100.000"	"34.1601"	"8897"	"8897"	"8876"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.0"	""	"92.3"	""	"87.5"	""	"105.9"	"2.1"	"122.5"	"130.8"	""	"915"	"25"	"36.000"	"29.000"	"0.142689198472298"	"15"	"0.001615"	"0.01379"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"488.26294"	"1462.77427"	"1462.77526"	"-0.68"	"-0.00033"	"8/80"	"8"	"80"	"8761795.15594482"	"HCD"	"MS2"	"17.9677"	"250.9"	"100.000"	"34.3504"	"9010"	"9010"	"8993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"325.5"	""	"286.4"	""	"327.9"	""	"433.6"	"21.0"	"479.4"	"506.5"	""	"906"	"43"	"36.000"	"29.000"	"0.00206584722925937"	"20"	"0"	"5.745E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQVWHEEHR"	"[R].iQVWHEEHR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"4"	"4"	"0.9500"	"0.0000"	"1"	"1"	"1"	"366.44910"	"1462.77456"	"1462.77526"	"-0.48"	"-0.00018"	"6/80"	"6"	"80"	"3641367.60314941"	"HCD"	"MS2"	"6.894197"	"74.3"	"100.000"	"34.0611"	"8893"	"8893"	"8877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.9"	""	"103.8"	""	"96.9"	""	"120.2"	"4.4"	"129.9"	"141.0"	""	"912"	"20"	"36.000"	"29.000"	"0.413966161761252"	"14"	"0.002525"	"0.02406"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"731.89667"	"1462.78606"	"1462.78853"	"-1.69"	"-0.00124"	"9/100"	"9"	"100"	"1056724.83007813"	"HCD"	"MS2"	"44.42916"	"86.3"	"100.000"	"66.2137"	"21905"	"21905"	"21881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.8"	""	"121.7"	""	"130.1"	""	"117.6"	"0.2"	"141.5"	"152.4"	""	"1010"	"17"	"37.000"	"30.000"	"1.112477863842"	"25"	"0.0001686"	"0.001576"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"488.26697"	"1462.78635"	"1462.78853"	"-1.49"	"-0.00073"	"14/100"	"14"	"100"	"2892212.4151001"	"HCD"	"MS2"	"3.096876"	"32.0"	"100.000"	"65.7075"	"21698"	"21698"	"21675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.7"	""	"34.8"	""	"43.8"	""	"86.5"	""	"55.5"	"50.6"	""	"996"	"54"	"36.000"	"29.000"	"0.000215888417436989"	""	"0"	"8.362E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"731.89709"	"1462.78691"	"1462.78853"	"-1.10"	"-0.00081"	"9/106"	"9"	"106"	"380101.741577148"	"HCD"	"MS2"	"28.52125"	"30.4"	"100.000"	"80.3934"	"27654"	"27654"	"27634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.9"	""	"41.6"	""	"38.5"	"2.3"	"34.9"	""	"57.3"	"65.7"	""	"993"	"33"	"36.000"	"29.000"	"0.0254050031345763"	"20"	"0"	"0.0003744"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"731.89746"	"1462.78765"	"1462.78853"	"-0.60"	"-0.00044"	"8/100"	"8"	"100"	"968302.255187988"	"HCD"	"MS2"	"30.40093"	"77.7"	"100.000"	"66.2310"	"21945"	"21945"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.1"	""	"98.8"	""	"116.8"	""	"107.3"	""	"141.3"	"133.8"	""	"994"	"18"	"36.000"	"29.000"	"0.842085886822322"	"25"	"0.0001991"	"0.002772"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9841"	"0.0000"	"1"	"1"	"1"	"731.89746"	"1462.78765"	"1462.78853"	"-0.60"	"-0.00044"	"10/100"	"10"	"100"	"3154516.2442627"	"HCD"	"MS2"	"4.461964"	"128.0"	"100.000"	"65.8435"	"21754"	"21754"	"21739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.7"	""	"143.6"	""	"173.2"	""	"333.9"	"1.9"	"185.8"	"191.3"	""	"994"	"63"	"36.000"	"29.000"	"2.23540587881964E-05"	"17"	"0"	"2.577E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7636"	"0.0000"	"1"	"1"	"1"	"488.26749"	"1462.78791"	"1462.78853"	"-0.43"	"-0.00021"	"14/100"	"14"	"100"	"3224434.72998047"	"HCD"	"MS2"	"11.45093"	"45.3"	"100.000"	"66.0059"	"21853"	"21853"	"21830"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"51.5"	""	"55.7"	""	"118.0"	""	"86.0"	"78.2"	""	"951"	"55"	"36.000"	"29.000"	"0.000140653492784526"	"29"	"0"	"2.098E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7451"	"0.0000"	"1"	"1"	"1"	"488.26752"	"1462.78800"	"1462.78853"	"-0.36"	"-0.00018"	"14/100"	"14"	"100"	"2183270.58911133"	"HCD"	"MS2"	"5.257091"	"27.2"	"100.000"	"65.6718"	"21717"	"21717"	"21696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.1"	""	"25.2"	""	"34.9"	""	"62.6"	""	"50.8"	"51.2"	""	"949"	"51"	"36.000"	"29.000"	"0.00034772524097441"	"29"	"0"	"6.895E-06"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.89771"	"1462.78813"	"1462.78853"	"-0.27"	"-0.00020"	"11/100"	"11"	"100"	"877982.8984375"	"HCD"	"MS2"	"11.01987"	"37.6"	"100.000"	"65.5959"	"21686"	"21686"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.1"	""	"43.1"	""	"43.4"	""	"98.0"	""	"64.1"	"62.9"	""	"949"	"59"	"36.000"	"29.000"	"6.00117396875062E-05"	"17"	"0"	"8.931E-06"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"488.26758"	"1462.78818"	"1462.78853"	"-0.24"	"-0.00012"	"14/100"	"14"	"100"	"2862406.46087646"	"HCD"	"MS2"	"13.74676"	"47.9"	"100.000"	"66.0139"	"21823"	"21823"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"46.7"	""	"51.8"	""	"124.2"	""	"105.5"	"85.9"	""	"949"	"49"	"36.000"	"29.000"	"0.000629848670192761"	"25"	"0"	"7.016E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"731.89783"	"1462.78838"	"1462.78853"	"-0.10"	"-0.00008"	"9/106"	"9"	"106"	"1234669.81304932"	"HCD"	"MS2"	"0"	"70.1"	"100.000"	"80.9698"	"27888"	"27888"	"27875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.3"	""	"127.6"	""	"82.3"	""	"62.8"	""	"126.1"	"136.2"	""	"959"	"54"	"36.000"	"29.000"	"0.000191332440682647"	"22"	"0"	"2.323E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9841"	"0.0000"	"1"	"1"	"1"	"731.89783"	"1462.78838"	"1462.78853"	"-0.10"	"-0.00008"	"10/100"	"10"	"100"	"3083387.30053711"	"HCD"	"MS2"	"4.953179"	"119.6"	"100.000"	"65.8723"	"21799"	"21799"	"21784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.0"	""	"137.8"	""	"152.2"	""	"323.1"	""	"176.8"	"182.3"	""	"959"	"63"	"36.000"	"29.000"	"2.15173414472937E-05"	"17"	"0"	"7.032E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8923"	"0.0000"	"1"	"1"	"1"	"731.89795"	"1462.78862"	"1462.78853"	"0.06"	"0.00005"	"9/106"	"9"	"106"	"1173199.05883789"	"HCD"	"MS2"	"0"	"62.0"	"100.000"	"81.0598"	"27952"	"27952"	"27945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.9"	""	"112.7"	""	"79.5"	""	"47.2"	""	"113.7"	"114.8"	""	"961"	"65"	"36.000"	"29.000"	"1.50208113590306E-05"	"23"	"0"	"1.3E-06"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.9014"	"0.0000"	"1"	"1"	"1"	"731.89825"	"1462.78923"	"1462.78853"	"0.48"	"0.00035"	"9/106"	"9"	"106"	"2147993.93817139"	"HCD"	"MS2"	"0"	"111.2"	"100.000"	"80.6744"	"27768"	"27768"	"27752"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"233.5"	""	"217.0"	""	"123.7"	""	"99.2"	""	"174.4"	"203.0"	""	"955"	"71"	"36.000"	"29.000"	"4.15885114204029E-06"	"24"	"0"	"8.204E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"731.89856"	"1462.78984"	"1462.78853"	"0.90"	"0.00066"	"9/106"	"9"	"106"	"2403273.97027588"	"HCD"	"MS2"	"0"	"116.7"	"100.000"	"80.7988"	"27846"	"27846"	"27827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.4"	""	"229.1"	""	"126.6"	""	"97.9"	""	"181.8"	"209.9"	""	"957"	"66"	"36.000"	"29.000"	"1.25280056943279E-05"	"23"	"0"	"2.81E-06"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGTIAGLNVMR"	"[K].dAGTIAGLNVmR.[I]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"731.89880"	"1462.79033"	"1462.78853"	"1.23"	"0.00090"	"9/100"	"9"	"100"	"676287.603942871"	"HCD"	"MS2"	"12.31788"	"33.7"	"100.000"	"65.5600"	"21638"	"21638"	"21615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.6"	""	"38.2"	""	"45.9"	""	"83.2"	""	"55.5"	"58.2"	""	"950"	"35"	"36.000"	"29.000"	"0.0136991496398514"	"17"	"9.9E-05"	"0.0009457"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"488.26831"	"1462.79038"	"1462.78853"	"1.26"	"0.00062"	"8/106"	"8"	"106"	"380430.88269043"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"80.7804"	"27839"	"27839"	"27811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"19.4"	""	"25.0"	""	"26.6"	"1.4"	"38.1"	"34.7"	""	"950"	"14"	"36.000"	"29.000"	"1.9755753998466"	"20"	"0.006033"	"0.07373"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"731.89886"	"1462.79045"	"1462.78853"	"1.32"	"0.00096"	"9/106"	"9"	"106"	"484809.957641602"	"HCD"	"MS2"	"29.80796"	"36.1"	"100.000"	"80.5084"	"27728"	"27728"	"27700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.3"	""	"59.0"	""	"47.9"	""	"40.4"	"0.9"	"67.0"	"59.9"	""	"949"	"47"	"36.000"	"29.000"	"0.00101212981128805"	"22"	"0"	"2.893E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].sMTNINDGLLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"488.26907"	"1462.79267"	"1462.78853"	"2.83"	"0.00138"	"8/106"	"8"	"106"	"339640.073730469"	"HCD"	"MS2"	"50.60504"	"15.5"	"100.000"	"80.7413"	"27796"	"27796"	"27766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"18.6"	""	"23.6"	""	"23.8"	"2.1"	"28.9"	"31.3"	""	"999"	"16"	"36.000"	"29.000"	"1.16824920071035"	"15"	"0.001999"	"0.01747"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQGVSTTDLVGR"	"[R].tQGVSTTDLVGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"731.90649"	"1462.80571"	"1462.80629"	"-0.39"	"-0.00029"	"5/122"	"5"	"122"	"199280.356079102"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"51.5894"	"15964"	"15964"	"15942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"16.5"	""	"18.3"	""	"25.4"	""	"29.2"	"29.0"	""	"999"	"17"	"36.000"	"29.000"	"1.0728413218282"	"17"	"0.003661"	"0.03993"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQGVSTTDLVGR"	"[R].tQGVSTTDLVGR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"O88637"	"Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"731.90686"	"1462.80644"	"1462.80629"	"0.11"	"0.00008"	"5/122"	"5"	"122"	"186243.720214844"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"51.2399"	"15859"	"15859"	"15839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"20.7"	""	"20.6"	""	"23.7"	""	"27.9"	"27.6"	""	"1008"	"29"	"37.000"	"30.000"	"0.0625792763026575"	"15"	"0.004852"	"0.05983"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"731.90735"	"1462.80742"	"1462.81031"	"-1.98"	"-0.00144"	"10/98"	"10"	"98"	"851142.063415527"	"HCD"	"MS2"	"7.102164"	"41.8"	"100.000"	"96.9669"	"34367"	"34367"	"34350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.6"	""	"64.5"	""	"58.6"	""	"63.9"	""	"79.5"	"70.6"	""	"972"	"43"	"36.000"	"29.000"	"0.0022163394115233"	"18"	"0"	"0.0001335"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"488.27405"	"1462.80759"	"1462.81031"	"-1.86"	"-0.00091"	"10/88"	"10"	"88"	"921582.87713623"	"HCD"	"MS2"	"16.18256"	"14.8"	"100.000"	"87.6583"	"30579"	"30579"	"30559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"23.1"	""	"19.5"	""	"24.7"	"1.0"	"24.4"	"26.5"	""	"992"	"36"	"36.000"	"29.000"	"0.0129563203178201"	"21"	"9.9E-05"	"0.0006502"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"488.27432"	"1462.80841"	"1462.81031"	"-1.30"	"-0.00063"	"10/88"	"10"	"88"	"972320.089355469"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"87.5770"	"30581"	"30581"	"30566"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"19.6"	""	"23.4"	""	"18.0"	""	"24.0"	"22.7"	""	"984"	"37"	"36.000"	"29.000"	"0.00895292822436112"	"23"	"9.9E-05"	"0.0004519"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"488.27444"	"1462.80878"	"1462.81031"	"-1.05"	"-0.00051"	"10/88"	"10"	"88"	"1179196.35253906"	"HCD"	"MS2"	"7.627275"	"16.7"	"100.000"	"88.2533"	"30817"	"30817"	"30802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"26.3"	""	"24.4"	""	"26.1"	""	"30.0"	"29.3"	""	"988"	"45"	"36.000"	"29.000"	"0.00139870764592489"	"25"	"0"	"0.00034"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"488.27444"	"1462.80878"	"1462.81031"	"-1.05"	"-0.00051"	"13/98"	"13"	"98"	"1649806.33502197"	"HCD"	"MS2"	"5.233003"	"16.8"	"100.000"	"97.0727"	"34379"	"34379"	"34361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"22.8"	""	"24.7"	""	"30.1"	""	"28.9"	"34.0"	""	"988"	"53"	"36.000"	"29.000"	"0.000244752394257567"	"25"	"0"	"1.005E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"731.90808"	"1462.80889"	"1462.81031"	"-0.97"	"-0.00071"	"10/98"	"10"	"98"	"799952.512329102"	"HCD"	"MS2"	"4.304564"	"37.9"	"100.000"	"96.9043"	"34311"	"34311"	"34297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.2"	""	"51.4"	""	"51.1"	""	"60.3"	"1.7"	"73.1"	"66.8"	""	"989"	"46"	"36.000"	"29.000"	"0.00119444538263302"	"15"	"0"	"4.593E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"488.27448"	"1462.80887"	"1462.81031"	"-0.98"	"-0.00048"	"10/88"	"10"	"88"	"1734230.69195557"	"HCD"	"MS2"	"1.10415"	"15.9"	"100.000"	"87.9511"	"30696"	"30696"	"30686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.5"	""	"25.5"	""	"27.3"	""	"26.1"	""	"23.0"	"26.9"	""	"989"	"43"	"36.000"	"29.000"	"0.00226551162980337"	"23"	"0"	"0.000318"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"488.27460"	"1462.80924"	"1462.81031"	"-0.73"	"-0.00036"	"11/88"	"11"	"88"	"1272671.5223999"	"HCD"	"MS2"	"4.261455"	"17.1"	"100.000"	"88.1666"	"30821"	"30821"	"30799"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"24.5"	""	"28.3"	""	"25.4"	""	"25.9"	"35.1"	""	"986"	"43"	"36.000"	"29.000"	"0.00225344477480134"	"24"	"0"	"0.0003211"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"731.90839"	"1462.80950"	"1462.81031"	"-0.56"	"-0.00041"	"8/88"	"8"	"88"	"1043601.55535889"	"HCD"	"MS2"	"0"	"47.0"	"100.000"	"88.3714"	"30904"	"30904"	"30886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.8"	""	"78.4"	""	"91.5"	""	"49.6"	"2.0"	"72.0"	"75.7"	""	"979"	"58"	"36.000"	"29.000"	"7.7224071651783E-05"	"23"	"0"	"1.104E-06"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"488.27475"	"1462.80970"	"1462.81031"	"-0.42"	"-0.00020"	"10/88"	"10"	"88"	"2101831.03149414"	"HCD"	"MS2"	"1.088249"	"19.2"	"100.000"	"87.8624"	"30697"	"30697"	"30681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"27.7"	""	"28.3"	""	"27.1"	""	"33.0"	"30.7"	""	"979"	"41"	"36.000"	"29.000"	"0.00354611402456707"	"24"	"0"	"0.0002357"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"731.90857"	"1462.80986"	"1462.81031"	"-0.31"	"-0.00022"	"8/88"	"8"	"88"	"5095961.03503418"	"HCD"	"MS2"	"0"	"171.9"	"100.000"	"88.1129"	"30761"	"30761"	"30751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"273.5"	""	"338.3"	""	"335.8"	""	"191.4"	"1.5"	"228.8"	"252.0"	""	"979"	"60"	"36.000"	"29.000"	"4.72881905265513E-05"	"26"	"0"	"2.185E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"731.90857"	"1462.80986"	"1462.81031"	"-0.31"	"-0.00022"	"9/88"	"9"	"88"	"5105382.05157471"	"HCD"	"MS2"	"0"	"184.7"	"100.000"	"87.7842"	"30666"	"30666"	"30650"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"311.8"	""	"356.3"	""	"351.6"	""	"214.5"	"2.0"	"242.1"	"263.0"	""	"979"	"56"	"36.000"	"29.000"	"0.000117152806276044"	"24"	"0"	"5.371E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"488.27484"	"1462.80997"	"1462.81031"	"-0.23"	"-0.00011"	"13/98"	"13"	"98"	"1219999.13647461"	"HCD"	"MS2"	"16.53622"	"15.7"	"100.000"	"97.1076"	"34424"	"34424"	"34404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"20.1"	""	"24.8"	""	"22.9"	""	"30.5"	"32.0"	""	"979"	"51"	"36.000"	"29.000"	"0.000364546301226981"	"25"	"0"	"1.803E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"731.90863"	"1462.80998"	"1462.81031"	"-0.22"	"-0.00016"	"9/88"	"9"	"88"	"1189213.3571167"	"HCD"	"MS2"	"0"	"48.2"	"100.000"	"87.4797"	"30542"	"30542"	"30530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.9"	""	"92.3"	""	"79.9"	""	"59.3"	""	"70.9"	"79.5"	""	"979"	"56"	"36.000"	"29.000"	"0.000121829565729923"	"24"	"0"	"2.851E-07"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"731.90863"	"1462.80998"	"1462.81031"	"-0.22"	"-0.00016"	"8/88"	"8"	"88"	"1685027.90600586"	"HCD"	"MS2"	"0"	"66.1"	"100.000"	"88.4029"	"30877"	"30877"	"30864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.4"	""	"120.6"	""	"115.8"	""	"86.9"	""	"93.7"	"104.2"	""	"979"	"60"	"36.000"	"29.000"	"4.83896739834572E-05"	"26"	"0"	"4.241E-07"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"731.90869"	"1462.81011"	"1462.81031"	"-0.14"	"-0.00010"	"9/88"	"9"	"88"	"4659573.04730225"	"HCD"	"MS2"	"0"	"161.7"	"100.000"	"88.0746"	"30784"	"30784"	"30768"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.9"	""	"315.3"	""	"305.8"	""	"181.9"	""	"202.3"	"256.9"	""	"978"	"56"	"36.000"	"29.000"	"0.000116227490015956"	"24"	"0"	"2.551E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"731.90875"	"1462.81023"	"1462.81031"	"-0.06"	"-0.00004"	"9/88"	"9"	"88"	"4416924.35406494"	"HCD"	"MS2"	"0"	"157.5"	"100.000"	"87.8290"	"30648"	"30648"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"268.7"	""	"312.7"	""	"292.5"	""	"177.9"	"1.0"	"208.0"	"223.7"	""	"978"	"52"	"36.000"	"29.000"	"0.000346185488563843"	"23"	"0"	"2.629E-06"	"0.979"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"488.27496"	"1462.81034"	"1462.81031"	"0.02"	"0.00001"	"8/88"	"8"	"88"	"388994.758361816"	"HCD"	"MS2"	"19.4733"	"12.0"	"100.000"	"88.5457"	"30935"	"30935"	"30914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"16.2"	""	"16.4"	""	"21.6"	""	"24.5"	"22.1"	""	"976"	"24"	"36.000"	"29.000"	"0.204842384187611"	"24"	"0.0001991"	"0.002655"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYVVDVGSEPR"	"[R].iYVVDVGSEPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8475"	"0.0000"	"1"	"1"	"1"	"731.90900"	"1462.81072"	"1462.81031"	"0.28"	"0.00020"	"9/88"	"9"	"88"	"1348212.35522461"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"87.5778"	"30547"	"30547"	"30533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.8"	""	"101.8"	""	"95.4"	""	"70.3"	""	"83.7"	"85.8"	""	"959"	"59"	"36.000"	"29.000"	"5.84505512684473E-05"	"25"	"0"	"7.641E-07"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"731.90900"	"1462.81072"	"1462.81031"	"0.28"	"0.00020"	"6/98"	"6"	"98"	"1638195.26953125"	"HCD"	"MS2"	"9.276288"	"81.7"	"100.000"	"97.4651"	"34538"	"34538"	"34522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.8"	""	"111.5"	""	"109.0"	""	"135.5"	"1.5"	"151.2"	"149.2"	""	"959"	"28"	"36.000"	"29.000"	"0.0696287520633322"	"16"	"0"	"0.0003588"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"731.90906"	"1462.81084"	"1462.81031"	"0.36"	"0.00026"	"14/98"	"14"	"98"	"10426424.4268799"	"HCD"	"MS2"	"0.184112"	"339.8"	"85.610"	"97.1744"	"34421"	"34421"	"34409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"474.6"	""	"510.6"	""	"482.4"	""	"559.5"	""	"609.6"	"581.3"	""	"959"	"51"	"36.000"	"29.000"	"0.000415708219426065"	"20"	"0"	"5.735E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVFGVEPDLTR"	"[K].tVFGVEPDLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"731.90955"	"1462.81182"	"1462.81031"	"1.03"	"0.00075"	"10/98"	"10"	"98"	"9991252.08288574"	"HCD"	"MS2"	"0"	"379.7"	"100.000"	"97.2716"	"34491"	"34491"	"34474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"536.9"	""	"566.4"	""	"509.9"	""	"635.9"	""	"703.4"	"643.9"	""	"965"	"47"	"36.000"	"29.000"	"0.000945142554966641"	"18"	"0"	"1.756E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"488.28262"	"1462.83332"	"1462.83397"	"-0.45"	"-0.00022"	"6/76"	"6"	"76"	"2086427.56567383"	"HCD"	"MS2"	"42.94156"	"119.7"	"100.000"	"68.0382"	"22673"	"22673"	"22657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.3"	""	"145.1"	""	"165.5"	""	"218.0"	""	"226.4"	"209.3"	""	"925"	"16"	"36.000"	"29.000"	"1.1564097297846"	"18"	"0.0001991"	"0.002774"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"731.92078"	"1462.83428"	"1462.83397"	"0.21"	"0.00015"	"9/76"	"9"	"76"	"593626.517700195"	"HCD"	"MS2"	"25.39845"	"55.5"	"100.000"	"68.1971"	"22738"	"22738"	"22714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.3"	""	"69.4"	""	"72.4"	""	"75.1"	"0.7"	"112.8"	"112.3"	""	"996"	"48"	"36.000"	"29.000"	"0.000805803858746248"	"27"	"0"	"1.082E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"731.92096"	"1462.83464"	"1462.83397"	"0.46"	"0.00034"	"14/76"	"14"	"76"	"670588.284484863"	"HCD"	"MS2"	"34.13087"	"62.9"	"100.000"	"68.1268"	"22677"	"22677"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"72.4"	""	"86.4"	""	"95.7"	"1.8"	"122.7"	"128.8"	""	"989"	"35"	"36.000"	"29.000"	"0.0153520471632947"	"22"	"0"	"8.577E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEAGIAVMK"	"[K].eGEAGIAVMk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"488.28314"	"1462.83487"	"1462.83397"	"0.62"	"0.00030"	"8/76"	"8"	"76"	"2278295.83105469"	"HCD"	"MS2"	"50.20247"	"121.2"	"100.000"	"67.9608"	"22610"	"22610"	"22591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"185.4"	""	"159.8"	""	"154.9"	""	"201.4"	""	"223.8"	"231.3"	""	"984"	"16"	"36.000"	"29.000"	"1.23869704845736"	"17"	"0.0001991"	"0.00373"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"732.38263"	"1463.75798"	"1463.76131"	"-2.27"	"-0.00166"	"8/86"	"8"	"86"	"938430.785522461"	"HCD"	"MS2"	"9.147304"	"57.2"	"100.000"	"95.3877"	"33697"	"33697"	"33681"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.7"	""	"59.6"	""	"57.5"	""	"82.6"	""	"120.1"	"141.3"	""	"822"	"44"	"36.000"	"29.000"	"0.00172918644266007"	""	"0"	"2.301E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"732.38397"	"1463.76067"	"1463.76131"	"-0.44"	"-0.00032"	"8/86"	"8"	"86"	"602474.389953613"	"HCD"	"MS2"	"16.83331"	"36.4"	"100.000"	"95.1455"	"33632"	"33632"	"33607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.9"	""	"38.0"	""	"35.0"	""	"50.1"	"1.1"	"81.0"	"82.3"	""	"831"	"50"	"36.000"	"29.000"	"0.000452450453780042"	"20"	"0"	"2.807E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"732.38422"	"1463.76116"	"1463.76131"	"-0.11"	"-0.00008"	"6/86"	"6"	"86"	"609694.630981445"	"HCD"	"MS2"	"15.96717"	"38.6"	"100.000"	"95.4474"	"33754"	"33754"	"33736"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"51.8"	""	"41.5"	""	"65.2"	""	"77.5"	"89.9"	""	"861"	"17"	"36.000"	"29.000"	"0.89325026926434"	"18"	"0.001615"	"0.01452"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IETIEVMEDR"	"[K].iETIEVMEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"Q6URK4"	"Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"732.38483"	"1463.76238"	"1463.76131"	"0.73"	"0.00053"	"13/86"	"13"	"86"	"431025.581848145"	"HCD"	"MS2"	"22.85242"	"29.4"	"100.000"	"95.1066"	"33583"	"33583"	"33562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"22.9"	""	"33.6"	""	"43.9"	""	"60.1"	"71.7"	""	"882"	"48"	"36.000"	"29.000"	"0.00071193212356048"	"21"	"0"	"4.383E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVAAEFLNDR"	"[K].aEVAAEFLNDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"488.59396"	"1463.76734"	"1463.76917"	"-1.25"	"-0.00061"	"12/100"	"12"	"100"	"233012.469970703"	"HCD"	"MS2"	"40.00266"	"8.3"	"100.000"	"96.6664"	"34215"	"34215"	"34194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"10.1"	""	"11.2"	""	"15.4"	""	"15.5"	"16.3"	""	"905"	"45"	"36.000"	"29.000"	"0.00134158620375977"	"23"	"0"	"0.0001534"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVAAEFLNDR"	"[K].aEVAAEFLNDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"732.38818"	"1463.76909"	"1463.76917"	"-0.06"	"-0.00004"	"7/100"	"7"	"100"	"210329.491577148"	"HCD"	"MS2"	"34.4399"	"15.3"	"100.000"	"96.7705"	"34288"	"34288"	"34263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.3"	""	"22.0"	""	"17.8"	""	"23.7"	""	"32.7"	"23.3"	""	"928"	"34"	"36.000"	"29.000"	"0.018429687895382"	"24"	"0"	"0.0001715"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVAAEFLNDR"	"[K].aEVAAEFLNDR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"732.38873"	"1463.77019"	"1463.76917"	"0.69"	"0.00051"	"7/100"	"7"	"100"	"214888.268798828"	"HCD"	"MS2"	"32.18813"	"16.8"	"100.000"	"96.7079"	"34232"	"34232"	"34207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"21.5"	""	"24.5"	""	"20.8"	""	"36.8"	"33.5"	""	"966"	"35"	"36.000"	"29.000"	"0.0152738010986133"	"23"	"0"	"0.0001002"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDYPSSPPK"	"[K].dDYPSSPPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"732.39264"	"1463.77800"	"1463.77823"	"-0.16"	"-0.00011"	"13/74"	"13"	"74"	"538345.836181641"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"43.6812"	"12791"	"12791"	"12762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"48.7"	""	"44.5"	""	"71.4"	""	"92.8"	"96.9"	""	"988"	"46"	"36.000"	"29.000"	"0.0013265601561553"	"26"	"0"	"0.000127"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDYPSSPPK"	"[K].dDYPSSPPk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"P63281"	"SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus OX=10116 GN=Ube2i PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"732.39270"	"1463.77812"	"1463.77823"	"-0.07"	"-0.00005"	"12/74"	"12"	"74"	"535174.65234375"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"43.8694"	"12832"	"12832"	"12812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"37.8"	""	"46.5"	""	"60.7"	""	"82.4"	"88.7"	""	"967"	"40"	"36.000"	"29.000"	"0.00451228454435346"	"23"	"9.9E-05"	"0.000509"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WTAPEAALYGR"	"[K].wTAPEAALYGR.[F]"	"N-Term(TMT6plex)"	"2"	"3"	"Q9WUD9; F1LM93"	"Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4;Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"Q62844; Q9WUD9; F1LM93"	"Tyrosine-protein kinase Fyn OS=Rattus norvegicus OX=10116 GN=Fyn PE=1 SV=1; Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus OX=10116 GN=Src PE=1 SV=4; Tyrosine-protein kinase Yes OS=Rattus norvegicus OX=10116 GN=Yes1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"732.40033"	"1463.79338"	"1463.78443"	"6.12"	"0.00448"	"12/86"	"12"	"86"	"373410.208679199"	"HCD"	"MS2"	"48.89899"	"26.1"	"100.000"	"95.5287"	"33754"	"33754"	"33736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"36.5"	""	"32.3"	""	"41.3"	""	"52.7"	"58.5"	""	"1060"	"13"	"37.000"	"30.000"	"2.5134825218793"	"19"	"0.009084"	"0.1167"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.41077"	"1463.81426"	"1463.81462"	"-0.25"	"-0.00018"	"8/70"	"8"	"70"	"764512.948608398"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"86.8178"	"30276"	"30276"	"30261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.8"	""	"40.7"	""	"53.2"	""	"89.7"	""	"117.4"	"118.6"	""	"1053"	"46"	"37.000"	"30.000"	"0.00121450239486112"	"16"	"9.9E-05"	"0.0005966"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9815"	"0.0000"	"1"	"1"	"1"	"732.41113"	"1463.81499"	"1463.81462"	"0.25"	"0.00019"	"8/70"	"8"	"70"	"658007.077087402"	"HCD"	"MS2"	"2.688046"	"42.4"	"100.000"	"86.8876"	"30269"	"30269"	"30257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"37.4"	""	"43.0"	""	"79.0"	""	"97.2"	"96.9"	""	"1032"	"54"	"37.000"	"30.000"	"0.000224207275672531"	"17"	"0"	"0.0003943"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"732.41144"	"1463.81560"	"1463.81462"	"0.67"	"0.00049"	"8/70"	"8"	"70"	"343350.12121582"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"86.5946"	"30152"	"30152"	"30144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.9"	""	"26.3"	""	"28.7"	""	"49.3"	""	"51.0"	"54.0"	""	"1034"	"51"	"37.000"	"30.000"	"0.000421202114838774"	"16"	"0.0001991"	"0.005324"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPVDEFDGK"	"[K].vPVDEFDGk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.41156"	"1463.81584"	"1463.81462"	"0.84"	"0.00061"	"7/70"	"7"	"70"	"284280.249145508"	"HCD"	"MS2"	"23.78861"	"22.5"	"100.000"	"86.5268"	"30159"	"30159"	"30142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"24.7"	""	"25.1"	""	"47.3"	"1.2"	"46.1"	"41.5"	""	"1030"	"37"	"37.000"	"30.000"	"0.0106858046148928"	"15"	"0.001951"	"0.01637"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIQEMQQK"	"[K].tIQEMQQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"732.41748"	"1463.82768"	"1463.82922"	"-1.05"	"-0.00077"	"7/72"	"7"	"72"	"506718.301147461"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"47.0548"	"14159"	"14159"	"14129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.1"	""	"52.6"	""	"47.6"	""	"83.4"	""	"123.6"	"113.8"	""	"1014"	"40"	"37.000"	"30.000"	"0.00528454936702405"	"24"	"9.9E-05"	"0.000667"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"732.86310"	"1464.71892"	"1464.72017"	"-0.86"	"-0.00063"	"8/94"	"8"	"94"	"210226.565307617"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"84.4890"	"29309"	"29309"	"29291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"25.9"	""	"30.4"	""	"26.3"	"0.6"	"43.0"	"41.1"	""	"584"	"6"	"34.000"	"27.000"	"6.7047540524881"	"15"	"0.008135"	"0.1041"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"732.86353"	"1464.71977"	"1464.72017"	"-0.27"	"-0.00020"	"8/94"	"8"	"94"	"345340.112854004"	"HCD"	"MS2"	"15.31229"	"22.5"	"100.000"	"83.8223"	"29039"	"29039"	"29023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.8"	""	"29.6"	""	"34.0"	""	"31.4"	""	"36.7"	"41.9"	""	"577"	"35"	"34.000"	"27.000"	"0.00853386596600121"	"17"	"0"	"7.328E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"732.86359"	"1464.71990"	"1464.72017"	"-0.19"	"-0.00014"	"8/94"	"8"	"94"	"555105.98828125"	"HCD"	"MS2"	"2.875243"	"36.2"	"100.000"	"84.2116"	"29225"	"29225"	"29203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.5"	""	"48.4"	""	"57.0"	""	"40.3"	"0.5"	"67.5"	"74.3"	""	"582"	"44"	"34.000"	"27.000"	"0.00120473905372542"	"27"	"0"	"0.0001181"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"732.86371"	"1464.72014"	"1464.72017"	"-0.02"	"-0.00002"	"8/94"	"8"	"94"	"522102.352661133"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"83.9137"	"29105"	"29105"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"45.8"	""	"44.7"	""	"32.3"	"0.5"	"55.4"	"53.0"	""	"577"	"44"	"34.000"	"27.000"	"0.00113800931648718"	""	"0"	"2.962E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLMDEGTDAR"	"[K].lDLMDEGTDAR.[D]"	"N-Term(TMT6plex)"	"2"	"3"	"P39052; Q08877"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1;Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"P21575; P39052; Q08877"	"Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2; Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1; Dynamin-3 OS=Rattus norvegicus OX=10116 GN=Dnm3 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"732.86377"	"1464.72026"	"1464.72017"	"0.06"	"0.00004"	"9/94"	"9"	"94"	"643676.515991211"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"84.1384"	"29167"	"29167"	"29146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"56.4"	""	"48.3"	""	"43.9"	""	"71.3"	"75.2"	""	"577"	"58"	"34.000"	"27.000"	"4.91072729671943E-05"	""	"0"	"2.588E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6909"	"0.0000"	"1"	"1"	"1"	"732.88550"	"1464.76372"	"1464.76442"	"-0.48"	"-0.00035"	"10/116"	"10"	"116"	"817710.720397949"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"48.0736"	"14574"	"14574"	"14545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.2"	""	"64.2"	""	"65.0"	""	"89.2"	""	"84.4"	"92.1"	""	"918"	"55"	"36.000"	"29.000"	"0.000160624831666016"	""	"0"	"1.789E-06"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVANSAFVER"	"[K].dQVANSAFVER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6615"	"0.0000"	"1"	"1"	"1"	"732.88629"	"1464.76531"	"1464.76442"	"0.60"	"0.00044"	"8/116"	"8"	"116"	"579537.441467285"	"HCD"	"MS2"	"0"	"34.8"	"100.000"	"48.3135"	"14634"	"14634"	"14605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.8"	""	"46.8"	""	"44.7"	""	"59.7"	"1.0"	"60.6"	"60.3"	""	"943"	"65"	"36.000"	"29.000"	"1.41085277616076E-05"	""	"0"	"2.702E-07"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPEQTGEK"	"[R].sMPEQTGEk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.89111"	"1464.77495"	"1464.77685"	"-1.30"	"-0.00095"	"8/86"	"8"	"86"	"1384678.45727539"	"HCD"	"MS2"	"74.6159"	"126.2"	"100.000"	"36.0166"	"9685"	"9685"	"9665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.4"	""	"148.7"	""	"171.4"	""	"172.4"	""	"244.8"	"254.9"	""	"958"	"16"	"36.000"	"29.000"	"1.21993169098824"	"13"	"0.003786"	"0.04072"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"732.89136"	"1464.77544"	"1464.77685"	"-0.96"	"-0.00071"	"13/76"	"13"	"76"	"610182.950805664"	"HCD"	"MS2"	"35.03406"	"61.7"	"100.000"	"45.1179"	"13340"	"13340"	"13318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.6"	""	"55.4"	""	"58.8"	""	"66.7"	"0.3"	"154.2"	"175.9"	""	"958"	"19"	"36.000"	"29.000"	"0.587943391724877"	"23"	"0.0001686"	"0.001286"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"732.89136"	"1464.77544"	"1464.77685"	"-0.96"	"-0.00071"	"8/76"	"8"	"76"	"1313767.35632324"	"HCD"	"MS2"	"0"	"117.6"	"100.000"	"44.7899"	"13207"	"13207"	"13180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.0"	""	"70.6"	""	"59.9"	""	"183.0"	""	"347.0"	"360.1"	""	"958"	"54"	"36.000"	"29.000"	"0.000213961440640311"	"27"	"0"	"7.529E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"732.89148"	"1464.77568"	"1464.77685"	"-0.80"	"-0.00058"	"8/76"	"8"	"76"	"969861.85333252"	"HCD"	"MS2"	"33.96948"	"96.4"	"100.000"	"44.8408"	"13261"	"13261"	"13239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.0"	""	"85.1"	""	"87.7"	""	"124.6"	""	"242.3"	"256.7"	""	"974"	"28"	"36.000"	"29.000"	"0.0745639593839149"	"24"	"0"	"0.0003524"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMPEQTGEK"	"[R].sMPEQTGEk.[-]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"P62890"	"60S ribosomal protein L30 OS=Rattus norvegicus OX=10116 GN=Rpl30 PE=3 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"732.89148"	"1464.77568"	"1464.77685"	"-0.80"	"-0.00058"	"8/86"	"8"	"86"	"1248083.00488281"	"HCD"	"MS2"	"0"	"105.2"	"100.000"	"36.1309"	"9694"	"9694"	"9675"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"206.5"	""	"112.1"	""	"140.1"	""	"117.3"	"0.4"	"194.8"	"225.4"	""	"974"	"45"	"36.000"	"29.000"	"0.00163881134285864"	"27"	"0"	"0.0001103"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMADEVNEK"	"[K].aMADEVNEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"732.89154"	"1464.77580"	"1464.77685"	"-0.71"	"-0.00052"	"8/76"	"8"	"76"	"1030398.84460449"	"HCD"	"MS2"	"27.19529"	"97.9"	"100.000"	"44.5358"	"13138"	"13138"	"13121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.9"	""	"74.6"	""	"51.0"	""	"145.7"	""	"268.6"	"313.7"	""	"977"	"56"	"36.000"	"29.000"	"0.000134234629379052"	""	"0"	"1.46E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDIPSSDAK"	"[K].sSDIPSSDAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"732.89978"	"1464.79228"	"1464.79461"	"-1.59"	"-0.00116"	"6/86"	"6"	"86"	"397815.452636719"	"HCD"	"MS2"	"100"	"33.1"	"100.000"	"39.4472"	"11039"	"11039"	"11014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.7"	""	"40.8"	""	"41.1"	""	"49.7"	""	"73.7"	"54.8"	""	"999"	"40"	"36.000"	"29.000"	"0.00464018710196578"	"22"	"9.9E-05"	"0.0006888"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDIPSSDAK"	"[K].sSDIPSSDAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"732.90076"	"1464.79424"	"1464.79461"	"-0.25"	"-0.00019"	"8/86"	"8"	"86"	"428714.891601563"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"39.3538"	"11037"	"11037"	"11014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.4"	""	"35.6"	""	"42.4"	""	"57.7"	""	"64.3"	"65.4"	""	"986"	"50"	"36.000"	"29.000"	"0.000506812034976352"	"24"	"0"	"0.0001841"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKTTNVVEESK"	"[K].TKTTNVVEESk.[D]"	"K11(TMT6plex)"	"1"	"1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"1"	"2"	"2"	"0.1724"	"0.0000"	"1"	"1"	"1"	"732.91931"	"1464.83135"	"1464.81070"	"14.09"	"0.01032"	"15/116"	"15"	"116"	"434247.054077148"	"HCD"	"MS2"	"0"	"41.9"	"100.000"	"41.2220"	"11754"	"11754"	"11732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"38.8"	""	"48.1"	""	"66.8"	"1.0"	"99.2"	"95.1"	""	"926"	"58"	"36.000"	"29.000"	"6.92757108771722E-05"	"21"	"0.0005161"	"0.006963"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANEFLEVGK"	"[R].aNEFLEVGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"732.92596"	"1464.84465"	"1464.84625"	"-1.09"	"-0.00080"	"7/84"	"7"	"84"	"282527.592590332"	"HCD"	"MS2"	"35.18927"	"27.2"	"100.000"	"91.0882"	"31958"	"31958"	"31939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.2"	""	"35.2"	""	"37.5"	""	"41.2"	""	"58.1"	"47.2"	""	"908"	"38"	"36.000"	"29.000"	"0.00736301784200955"	""	"0"	"0.0002019"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANEFLEVGK"	"[R].aNEFLEVGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.5122"	"0.0000"	"1"	"1"	"1"	"732.92609"	"1464.84490"	"1464.84625"	"-0.92"	"-0.00068"	"7/84"	"7"	"84"	"228759.726745605"	"HCD"	"MS2"	"13.18656"	"20.7"	"100.000"	"90.9396"	"31936"	"31936"	"31912"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"28.6"	""	"26.5"	""	"35.8"	""	"39.8"	"38.8"	""	"906"	"41"	"36.000"	"29.000"	"0.00390030169739624"	""	"0"	"0.0001384"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANEFLEVGK"	"[R].aNEFLEVGk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"Q1JU68"	"Eukaryotic translation initiation factor 3 subunit A OS=Rattus norvegicus OX=10116 GN=Eif3a PE=2 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"732.92725"	"1464.84722"	"1464.84625"	"0.66"	"0.00048"	"10/84"	"10"	"84"	"147271.869934082"	"HCD"	"MS2"	"34.27068"	"13.3"	"100.000"	"91.2676"	"32068"	"32068"	"32046"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"16.3"	""	"21.2"	""	"17.8"	""	"24.2"	"24.7"	""	"885"	"25"	"36.000"	"29.000"	"0.144182740193389"	"23"	"0.0001991"	"0.005346"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQIDVIHR"	"[R].iLEQIDVIHR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.8596"	"0.0000"	"1"	"1"	"1"	"488.96222"	"1464.87210"	"1464.87358"	"-1.01"	"-0.00049"	"12/90"	"12"	"90"	"1033568.41723633"	"HCD"	"MS2"	"39.74096"	"15.8"	"100.000"	"95.4152"	"33741"	"33741"	"33724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"16.4"	""	"24.2"	""	"25.5"	""	"33.7"	"37.7"	""	"704"	"57"	"35.000"	"28.000"	"7.08830935951561E-05"	"24"	"0"	"1.6E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQIDVIHR"	"[R].iLEQIDVIHR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.8772"	"0.0000"	"1"	"1"	"1"	"488.96240"	"1464.87265"	"1464.87358"	"-0.63"	"-0.00031"	"12/90"	"12"	"90"	"1619170.72546387"	"HCD"	"MS2"	"16.38129"	"19.0"	"100.000"	"95.7386"	"33840"	"33840"	"33824"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"21.7"	""	"19.7"	""	"36.0"	"0.9"	"40.3"	"39.3"	""	"692"	"57"	"35.000"	"28.000"	"6.93547321468347E-05"	"23"	"0"	"1.954E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQIDVIHR"	"[R].iLEQIDVIHR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"488.96255"	"1464.87311"	"1464.87358"	"-0.32"	"-0.00016"	"13/90"	"13"	"90"	"1790652.70812988"	"HCD"	"MS2"	"17.80552"	"17.7"	"100.000"	"95.7266"	"33867"	"33867"	"33851"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"18.2"	""	"16.4"	""	"35.0"	""	"37.0"	"43.0"	""	"690"	"61"	"35.000"	"28.000"	"2.86958501030421E-05"	"19"	"0"	"1.009E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEQIDVIHR"	"[R].iLEQIDVIHR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"P31430"	"Dipeptidase 1 OS=Rattus norvegicus OX=10116 GN=Dpep1 PE=2 SV=2"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"488.96277"	"1464.87375"	"1464.87358"	"0.12"	"0.00006"	"12/90"	"12"	"90"	"1421333.72351074"	"HCD"	"MS2"	"31.02176"	"16.8"	"100.000"	"95.4292"	"33714"	"33714"	"33695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"20.8"	""	"19.2"	""	"27.2"	""	"39.4"	"38.0"	""	"690"	"53"	"35.000"	"28.000"	"0.000190028655259864"	"18"	"0"	"1.623E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.39258"	"1465.77788"	"1465.77979"	"-1.30"	"-0.00095"	"12/108"	"12"	"108"	"804334.809875488"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"93.9349"	"33143"	"33143"	"33126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"12.7"	""	"10.3"	""	"18.1"	""	"21.0"	"27.7"	"NoQuanLabels"	"911"	"95"	"36.000"	"29.000"	"1.47057907244011E-08"	"18"	"0"	"1.325E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"733.39313"	"1465.77898"	"1465.77979"	"-0.55"	"-0.00041"	"9/108"	"9"	"108"	"176582.013244629"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"94.2509"	"33271"	"33271"	"33247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"10.4"	""	"13.0"	""	"16.4"	""	"13.7"	"16.1"	"NoQuanLabels"	"925"	"80"	"36.000"	"29.000"	"5.14175923867735E-07"	"23"	"0"	"1.982E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].LGEYGFQNAVLVR.[Y]"	""	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9596"	"0.0000"	"1"	"1"	"1"	"733.39349"	"1465.77971"	"1465.77979"	"-0.05"	"-0.00004"	"10/108"	"10"	"108"	"775711.337524414"	"HCD"	"MS2"	"6.662097"	"9.9"	"100.000"	"94.0390"	"33149"	"33149"	"33131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"9.8"	""	"16.0"	""	"15.5"	""	"17.6"	"23.3"	"NoQuanLabels"	"942"	"99"	"36.000"	"29.000"	"5.70191720902277E-09"	"23"	"0"	"1.826E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RANILEDSYR"	"[R].rANILEDSYR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"489.26981"	"1465.79486"	"1465.79606"	"-0.81"	"-0.00040"	"8/94"	"8"	"94"	"2661104.13879395"	"HCD"	"MS2"	"40.55235"	"109.6"	"100.000"	"41.2612"	"11770"	"11770"	"11746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.6"	""	"144.4"	""	"146.6"	""	"190.5"	"1.2"	"199.4"	"187.5"	""	"980"	"16"	"36.000"	"29.000"	"1.35268314954797"	"13"	"0.003529"	"0.03883"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNPSNYEK"	"[K].gVNPSNYEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"733.40735"	"1465.80742"	"1465.80511"	"1.57"	"0.00115"	"12/82"	"12"	"82"	"490313.310668945"	"HCD"	"MS2"	"19.34469"	"53.6"	"100.000"	"46.8042"	"14057"	"14057"	"14034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.1"	""	"63.5"	""	"65.4"	""	"78.1"	"0.5"	"103.4"	"104.6"	""	"970"	"33"	"36.000"	"29.000"	"0.0220669209172773"	"27"	"0.001348"	"0.01072"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVNPSNYEK"	"[K].gVNPSNYEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"Q02589"	"[Protein ADP-ribosylarginine] hydrolase OS=Rattus norvegicus OX=10116 GN=Adprh PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"733.40857"	"1465.80986"	"1465.80511"	"3.24"	"0.00237"	"8/82"	"8"	"82"	"727469.167663574"	"HCD"	"MS2"	"41.99999"	"80.7"	"100.000"	"46.6619"	"13999"	"13999"	"13977"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.1"	""	"95.7"	""	"90.6"	""	"134.5"	"0.8"	"144.0"	"172.6"	""	"954"	"38"	"36.000"	"29.000"	"0.00840462574138348"	"20"	"0.001261"	"0.009942"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSVDPDFIK"	"[K].sSVDPDFIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"Q9JJ79"	"Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync2h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"733.41815"	"1465.82903"	"1465.83027"	"-0.85"	"-0.00062"	"5/74"	"5"	"74"	"200429.894287109"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"82.6884"	"28581"	"28581"	"28555"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.8"	""	"28.1"	""	"33.1"	""	"27.6"	"0.6"	"48.0"	"34.4"	""	"948"	"13"	"36.000"	"29.000"	"2.31088504309005"	"18"	"0.004158"	"0.04502"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNVVEESK"	"[K].tTnVVEESk.[D]"	"N-Term(TMT6plex); N3(Deamidated); K9(TMT6plex)"	"1"	"1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"B4F777"	"High mobility group nucleosome-binding domain-containing protein 5 OS=Rattus norvegicus OX=10116 GN=Hmgn5 PE=2 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"733.42261"	"1465.83794"	"1465.81501"	"15.64"	"0.01146"	"6/90"	"6"	"90"	"420704.402587891"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"41.1448"	"11760"	"11760"	"11739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.3"	""	"38.9"	""	"45.4"	""	"64.5"	"3.3"	"90.4"	"85.1"	""	"951"	"21"	"36.000"	"29.000"	"0.353305600069881"	"29"	"0.004959"	"0.06223"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETGQQFAVK"	"[R].eTGQQFAVk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"Q62915"	"Peripheral plasma membrane protein CASK OS=Rattus norvegicus OX=10116 GN=Cask PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"733.42371"	"1465.84014"	"1465.84150"	"-0.93"	"-0.00068"	"8/76"	"8"	"76"	"302161.118347168"	"HCD"	"MS2"	"29.55028"	"33.0"	"100.000"	"52.2677"	"16239"	"16239"	"16211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"42.9"	""	"39.2"	""	"49.1"	""	"66.6"	"74.1"	""	"931"	"46"	"36.000"	"29.000"	"0.00113219096622386"	"23"	"0"	"0.0001142"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNELLIYK"	"[R].dNELLIYk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"733.43573"	"1465.86418"	"1465.86665"	"-1.68"	"-0.00123"	"5/72"	"5"	"72"	"381371.189147949"	"HCD"	"MS2"	"32.96238"	"32.6"	"100.000"	"96.8026"	"34270"	"34270"	"34251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.5"	""	"36.4"	""	"48.7"	""	"63.7"	""	"61.3"	"64.2"	""	"711"	"30"	"35.000"	"28.000"	"0.0383565559752704"	"24"	"0.0001686"	"0.001316"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNELLIYK"	"[R].dNELLIYk.[D]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"P23680"	"Serum amyloid P-component OS=Rattus norvegicus OX=10116 GN=Apcs PE=2 SV=2"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"733.43628"	"1465.86528"	"1465.86665"	"-0.93"	"-0.00068"	"9/72"	"9"	"72"	"384579.757080078"	"HCD"	"MS2"	"39.07111"	"28.8"	"100.000"	"96.8443"	"34318"	"34318"	"34295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.1"	""	"42.8"	""	"32.3"	""	"59.3"	"0.5"	"53.9"	"52.0"	""	"713"	"20"	"35.000"	"28.000"	"0.364803951748089"	"21"	"0.0007633"	"0.007405"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFNMIDQNR"	"[K].eAFNMIDQNR.[D]"	"N-Term(TMT6plex)"	"1"	"3"	"P13832"	"Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"P18666; Q64122; P13832"	"Myosin regulatory light chain 12B OS=Rattus norvegicus OX=10116 GN=Myl12b PE=1 SV=3; Myosin regulatory light polypeptide 9 OS=Rattus norvegicus OX=10116 GN=Myl9 PE=1 SV=2; Myosin regulatory light chain RLC-A OS=Rattus norvegicus OX=10116 GN=Rlc-a PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.86652"	"1466.72576"	"1466.72593"	"-0.12"	"-0.00009"	"6/96"	"6"	"96"	"213292.119140625"	"HCD"	"MS2"	"31.63757"	"22.8"	"100.000"	"70.5521"	"23696"	"23696"	"23673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"31.3"	""	"27.0"	""	"33.2"	"1.3"	"44.1"	"43.9"	""	"637"	"22"	"35.000"	"28.000"	"0.199117502649056"	"14"	"0.0007633"	"0.00734"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].aMEGAGTDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"733.88104"	"1466.75481"	"1466.75612"	"-0.89"	"-0.00065"	"8/84"	"8"	"84"	"2988881.37298584"	"HCD"	"MS2"	"0"	"241.5"	"100.000"	"35.6125"	"9483"	"9483"	"9463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"469.0"	""	"363.5"	""	"376.7"	""	"259.2"	""	"407.4"	"410.1"	""	"819"	"51"	"36.000"	"29.000"	"0.000308499103348957"	"26"	"0"	"2.161E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMEGAGTDEK"	"[K].aMEGAGTDEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"733.88159"	"1466.75591"	"1466.75612"	"-0.14"	"-0.00010"	"9/84"	"9"	"84"	"2744132.34552002"	"HCD"	"MS2"	"0"	"231.3"	"100.000"	"35.4564"	"9457"	"9457"	"9435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"452.6"	""	"353.0"	""	"364.4"	""	"241.3"	"1.4"	"382.5"	"389.9"	""	"827"	"52"	"36.000"	"29.000"	"0.000267593471612039"	"26"	"0"	"2.736E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSMTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"733.89948"	"1466.79167"	"1466.79250"	"-0.56"	"-0.00041"	"9/84"	"9"	"84"	"967036.781738281"	"HCD"	"MS2"	"6.215156"	"92.9"	"100.000"	"50.2862"	"15471"	"15471"	"15447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.1"	""	"105.1"	""	"116.6"	""	"111.7"	"1.5"	"189.0"	"243.5"	""	"874"	"45"	"36.000"	"29.000"	"0.00149789522720799"	"21"	"0"	"8.179E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSMTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"733.89960"	"1466.79192"	"1466.79250"	"-0.40"	"-0.00029"	"16/84"	"16"	"84"	"1002653.12689209"	"HCD"	"MS2"	"0"	"92.4"	"100.000"	"50.5704"	"15552"	"15552"	"15526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.1"	""	"99.0"	""	"115.7"	""	"112.7"	""	"192.0"	"237.8"	""	"874"	"46"	"36.000"	"29.000"	"0.00101503598000806"	"21"	"0"	"4.914E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEPNSSLAK"	"[K].yEPNSSLAk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"P10687"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 OS=Rattus norvegicus OX=10116 GN=Plcb1 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"733.91534"	"1466.82341"	"1466.82552"	"-1.43"	"-0.00105"	"11/82"	"11"	"82"	"406706.291442871"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"51.8139"	"16088"	"16088"	"16059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"50.5"	""	"53.6"	""	"60.0"	"0.9"	"76.9"	"87.5"	""	"879"	"28"	"36.000"	"29.000"	"0.0699775735538988"	"20"	"0.00455"	"0.05357"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTQVYSPEK"	"[K].gTQVYSPEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"733.91669"	"1466.82610"	"1466.82552"	"0.40"	"0.00029"	"6/88"	"6"	"88"	"504950.035827637"	"HCD"	"MS2"	"100"	"44.7"	"100.000"	"43.6193"	"12731"	"12731"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"39.7"	""	"52.4"	""	"82.3"	""	"99.7"	"98.9"	""	"872"	"27"	"36.000"	"29.000"	"0.0890197743875915"	"18"	"0.0001686"	"0.001501"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQPGVPGSLAR"	"[K].qQQPGVPGSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"733.91779"	"1466.82829"	"1466.82769"	"0.41"	"0.00030"	"9/110"	"9"	"110"	"181223.728271484"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"41.4292"	"11872"	"11872"	"11846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.9"	""	"11.0"	""	"11.8"	""	"19.7"	"2.3"	"30.4"	"18.1"	""	"852"	"18"	"36.000"	"29.000"	"0.721787902990562"	"14"	"0.001596"	"0.01292"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQQPGVPGSLAR"	"[K].qQQPGVPGSLAR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"733.92072"	"1466.83415"	"1466.82769"	"4.41"	"0.00323"	"10/110"	"10"	"110"	"489130.667358398"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"41.3745"	"11816"	"11816"	"11786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.4"	""	"29.9"	""	"35.1"	""	"57.1"	""	"60.0"	"57.1"	""	"881"	"24"	"36.000"	"29.000"	"0.165175607489135"	"15"	"0.001951"	"0.01719"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"734.40356"	"1467.79985"	"1467.80047"	"-0.42"	"-0.00031"	"8/104"	"8"	"104"	"1304893.37738037"	"HCD"	"MS2"	"0"	"55.2"	"100.000"	"71.1471"	"23904"	"23904"	"23886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.7"	""	"57.0"	""	"70.7"	""	"105.4"	""	"118.6"	"115.3"	""	"868"	"50"	"36.000"	"29.000"	"0.000390381950384035"	"22"	"0"	"1.344E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVLNDELPGR"	"[R].ePVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"734.40387"	"1467.80046"	"1467.80047"	"-0.01"	"-0.00001"	"8/104"	"8"	"104"	"1444801.26605225"	"HCD"	"MS2"	"0"	"60.7"	"100.000"	"71.3589"	"24022"	"24022"	"24005"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.1"	""	"71.0"	""	"83.4"	""	"102.8"	""	"119.2"	"125.6"	""	"870"	"51"	"36.000"	"29.000"	"0.000380617942223935"	"24"	"0"	"8.448E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"489.95291"	"1467.84418"	"1467.84592"	"-1.18"	"-0.00058"	"8/70"	"8"	"70"	"836608.503845215"	"HCD"	"MS2"	"32.94357"	"31.3"	"100.000"	"84.7616"	"29418"	"29418"	"29406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"37.0"	""	"44.7"	""	"48.6"	""	"64.1"	"63.2"	""	"738"	"30"	"35.000"	"28.000"	"0.0356472774347241"	"16"	"0.001488"	"0.01271"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEIQYLK"	"[K].eSEIQYLk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"734.42615"	"1467.84502"	"1467.84592"	"-0.61"	"-0.00045"	"6/66"	"6"	"66"	"275992.953857422"	"HCD"	"MS2"	"25.80131"	"27.7"	"100.000"	"76.2511"	"25975"	"25975"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"32.6"	""	"39.6"	""	"37.7"	""	"57.4"	"57.1"	""	"738"	"26"	"35.000"	"28.000"	"0.0867014510893026"	"28"	"0.0001686"	"0.001501"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"734.42621"	"1467.84514"	"1467.84592"	"-0.53"	"-0.00039"	"8/70"	"8"	"70"	"1244904.82122803"	"HCD"	"MS2"	"0"	"98.5"	"100.000"	"84.8980"	"29473"	"29473"	"29456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"123.9"	""	"160.3"	""	"156.8"	""	"169.4"	"191.2"	""	"729"	"51"	"35.000"	"28.000"	"0.00031528080639374"	"21"	"0"	"6.914E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEIQYLK"	"[K].eSEIQYLk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.6400"	"0.0000"	"1"	"1"	"1"	"734.42633"	"1467.84538"	"1467.84592"	"-0.36"	"-0.00027"	"7/66"	"7"	"66"	"383088.795898438"	"HCD"	"MS2"	"39.43531"	"37.2"	"100.000"	"76.4019"	"26068"	"26068"	"26042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.9"	""	"49.5"	""	"60.1"	""	"47.2"	"0.1"	"68.8"	"73.7"	""	"734"	"25"	"35.000"	"28.000"	"0.104632370417393"	"23"	"0.0001686"	"0.001818"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"734.42639"	"1467.84551"	"1467.84592"	"-0.28"	"-0.00021"	"12/70"	"12"	"70"	"251783.235229492"	"HCD"	"MS2"	"48.17361"	"21.4"	"100.000"	"84.5807"	"29375"	"29375"	"29351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.3"	""	"29.7"	""	"34.1"	""	"36.4"	""	"37.9"	"34.0"	""	"734"	"41"	"35.000"	"28.000"	"0.00299685730288603"	"20"	"9.9E-05"	"0.0006861"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.42639"	"1467.84551"	"1467.84592"	"-0.28"	"-0.00021"	"8/70"	"8"	"70"	"339488.375610352"	"HCD"	"MS2"	"10.96347"	"28.5"	"100.000"	"84.6021"	"29355"	"29355"	"29334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.7"	""	"41.5"	""	"36.5"	""	"51.9"	""	"46.5"	"53.8"	""	"734"	"48"	"35.000"	"28.000"	"0.000634842603831943"	"15"	"0"	"4.314E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEIQYLK"	"[K].eSEIQYLk.[Q]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"Q9ERE6"	"Myosin phosphatase Rho-interacting protein OS=Rattus norvegicus OX=10116 GN=Mprip PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"734.42639"	"1467.84551"	"1467.84592"	"-0.28"	"-0.00020"	"10/66"	"10"	"66"	"337477.830993652"	"HCD"	"MS2"	"19.69778"	"34.4"	"100.000"	"76.5485"	"26096"	"26096"	"26077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"42.7"	""	"42.6"	""	"43.6"	"2.4"	"70.8"	"71.4"	""	"734"	"15"	"35.000"	"28.000"	"1.20688548531486"	"19"	"0.0001991"	"0.002902"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"734.42651"	"1467.84575"	"1467.84592"	"-0.11"	"-0.00008"	"8/70"	"8"	"70"	"1251040.68817139"	"HCD"	"MS2"	"0"	"101.6"	"100.000"	"84.8579"	"29486"	"29486"	"29471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.6"	""	"127.8"	""	"158.1"	""	"154.2"	"1.6"	"173.7"	"193.3"	""	"734"	"53"	"35.000"	"28.000"	"0.000196185119898689"	"21"	"0"	"6.58E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"489.95349"	"1467.84592"	"1467.84592"	"0.00"	"0.00000"	"8/70"	"8"	"70"	"984604.371643066"	"HCD"	"MS2"	"30.86141"	"34.9"	"100.000"	"84.7907"	"29459"	"29459"	"29445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"47.0"	""	"51.7"	""	"55.8"	""	"64.1"	"68.2"	""	"722"	"23"	"35.000"	"28.000"	"0.189019757607456"	"21"	"0.0007633"	"0.007542"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"734.42664"	"1467.84599"	"1467.84592"	"0.05"	"0.00004"	"8/70"	"8"	"70"	"301938.055541992"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"85.2068"	"29598"	"29598"	"29575"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"32.8"	""	"35.7"	""	"46.0"	"1.8"	"47.8"	"44.5"	""	"722"	"50"	"35.000"	"28.000"	"0.000398572381784648"	"20"	"0"	"0.0002202"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"734.42682"	"1467.84636"	"1467.84592"	"0.30"	"0.00022"	"8/70"	"8"	"70"	"484304.795959473"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"85.1576"	"29607"	"29607"	"29589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.1"	""	"53.8"	""	"63.4"	""	"64.9"	""	"81.3"	"77.8"	""	"725"	"54"	"35.000"	"28.000"	"0.000144979971788398"	"21"	"0"	"1.827E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDTLYNGK"	"[R].vVDTLYnGk.[L]"	"N-Term(TMT6plex); N7(Deamidated); K9(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"734.42694"	"1467.84661"	"1467.84592"	"0.47"	"0.00034"	"14/70"	"14"	"70"	"602997.462402344"	"HCD"	"MS2"	"13.88388"	"48.1"	"100.000"	"79.3200"	"27218"	"27218"	"27201"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.7"	""	"52.1"	""	"60.9"	""	"72.2"	"0.4"	"86.8"	"107.2"	""	"746"	"46"	"35.000"	"28.000"	"0.000840831226132856"	"21"	"0"	"0.0001306"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"734.84406"	"1468.68083"	"1468.68069"	"0.10"	"0.00007"	"9/76"	"9"	"76"	"1147921.06604004"	"HCD"	"MS2"	"10.43293"	"69.1"	"100.000"	"80.7137"	"27784"	"27784"	"27766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.9"	""	"63.2"	""	"64.0"	""	"144.1"	"0.3"	"151.5"	"119.7"	""	"343"	"38"	"32.000"	"25.000"	"0.00250763385419327"	"22"	"0"	"1.515E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"734.84430"	"1468.68132"	"1468.68069"	"0.43"	"0.00031"	"9/76"	"9"	"76"	"842452.294006348"	"HCD"	"MS2"	"9.572831"	"50.1"	"100.000"	"80.8380"	"27862"	"27862"	"27843"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.7"	""	"56.2"	""	"46.6"	""	"90.4"	""	"107.9"	"93.7"	""	"339"	"49"	"32.000"	"25.000"	"0.000222417882883755"	"24"	"0"	"3.06E-06"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"734.84467"	"1468.68205"	"1468.68069"	"0.93"	"0.00068"	"9/76"	"9"	"76"	"2697146.87915039"	"HCD"	"MS2"	"49.30053"	"135.3"	"100.000"	"80.4096"	"27661"	"27661"	"27644"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"210.4"	""	"127.1"	""	"108.4"	""	"265.8"	"2.2"	"299.2"	"272.5"	""	"336"	"22"	"32.000"	"25.000"	"0.107475452361085"	"24"	"0"	"6.888E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDGGGWWYNR"	"[K].eDGGGWWYNR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"734.84509"	"1468.68291"	"1468.68069"	"1.51"	"0.00111"	"8/76"	"8"	"76"	"2914337.85040283"	"HCD"	"MS2"	"37.50907"	"153.3"	"100.000"	"80.5201"	"27733"	"27733"	"27716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"243.3"	""	"140.5"	""	"134.4"	""	"305.4"	"1.3"	"331.2"	"299.6"	""	"342"	"29"	"32.000"	"25.000"	"0.0219278529634179"	"22"	"0"	"7.788E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"490.25366"	"1468.74643"	"1468.74810"	"-1.14"	"-0.00056"	"11/96"	"11"	"96"	"591783.168395996"	"HCD"	"MS2"	"15.83731"	"17.6"	"100.000"	"80.2621"	"27628"	"27628"	"27610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"21.7"	""	"23.3"	""	"28.9"	"1.5"	"34.8"	"33.0"	""	"722"	"34"	"35.000"	"28.000"	"0.0129272813794052"	"17"	"9.9E-05"	"0.0004631"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"490.25394"	"1468.74726"	"1468.74810"	"-0.58"	"-0.00028"	"12/96"	"12"	"96"	"524711.050537109"	"HCD"	"MS2"	"21.89459"	"13.5"	"100.000"	"79.9102"	"27458"	"27458"	"27431"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"15.8"	""	"15.8"	""	"25.6"	"1.2"	"24.6"	"30.4"	""	"717"	"45"	"35.000"	"28.000"	"0.00109771389097811"	"20"	"9.9E-05"	"0.0004572"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"490.25400"	"1468.74744"	"1468.74810"	"-0.45"	"-0.00022"	"12/96"	"12"	"96"	"540364.372741699"	"HCD"	"MS2"	"15.06225"	"13.6"	"100.000"	"79.9649"	"27508"	"27508"	"27477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"14.9"	""	"13.3"	""	"24.9"	""	"26.9"	"31.1"	""	"717"	"38"	"35.000"	"28.000"	"0.00533935946359363"	"18"	"0"	"0.0003914"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.25412"	"1468.74781"	"1468.74810"	"-0.20"	"-0.00010"	"8/96"	"8"	"96"	"267466.356140137"	"HCD"	"MS2"	"72.91795"	"11.8"	"100.000"	"80.2667"	"27603"	"27603"	"27578"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"15.5"	""	"12.0"	""	"25.2"	""	"25.7"	"24.2"	""	"716"	"17"	"35.000"	"28.000"	"0.669704206250957"	"14"	"0.00394"	"0.04308"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"734.87781"	"1468.74834"	"1468.74810"	"0.16"	"0.00012"	"10/96"	"10"	"96"	"2854162.27905273"	"HCD"	"MS2"	"0"	"131.0"	"100.000"	"79.8112"	"27417"	"27417"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.5"	""	"105.1"	""	"125.3"	""	"262.3"	""	"308.1"	"326.1"	""	"716"	"66"	"35.000"	"28.000"	"8.66728398731553E-06"	"21"	"0"	"8.944E-07"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9219"	"0.0000"	"1"	"1"	"1"	"734.87781"	"1468.74834"	"1468.74810"	"0.16"	"0.00012"	"9/96"	"9"	"96"	"2967753.18353271"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"79.8959"	"27479"	"27479"	"27461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.6"	""	"99.4"	""	"119.3"	""	"255.6"	"1.9"	"295.6"	"285.8"	""	"716"	"64"	"35.000"	"28.000"	"1.29384730824982E-05"	"21"	"0"	"4.36E-07"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"734.87787"	"1468.74846"	"1468.74810"	"0.24"	"0.00018"	"8/96"	"8"	"96"	"2667337.6270752"	"HCD"	"MS2"	"48.36623"	"141.5"	"100.000"	"80.4877"	"27719"	"27719"	"27700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.9"	""	"135.0"	""	"125.7"	""	"265.4"	"0.2"	"328.2"	"277.2"	""	"710"	"25"	"35.000"	"28.000"	"0.108950280587886"	"20"	"0"	"5.408E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9254"	"0.0000"	"1"	"1"	"1"	"734.87891"	"1468.75054"	"1468.74810"	"1.66"	"0.00122"	"9/96"	"9"	"96"	"5539388.33911133"	"HCD"	"MS2"	"0"	"233.2"	"100.000"	"80.1128"	"27541"	"27541"	"27525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.2"	""	"181.0"	""	"207.8"	""	"470.4"	"3.9"	"567.9"	"568.2"	""	"754"	"67"	"35.000"	"28.000"	"7.59174042198122E-06"	"22"	"0"	"4.701E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFR"	"[K].dIISDTSGEFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"734.87946"	"1468.75163"	"1468.74810"	"2.40"	"0.00177"	"9/96"	"9"	"96"	"5169209.72686768"	"HCD"	"MS2"	"0"	"209.4"	"100.000"	"80.1931"	"27601"	"27601"	"27584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.2"	""	"164.7"	""	"211.5"	""	"416.8"	""	"503.8"	"516.8"	""	"743"	"70"	"35.000"	"28.000"	"4.13960419229328E-06"	"23"	"0"	"1.565E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"490.27792"	"1468.81922"	"1468.82087"	"-1.13"	"-0.00055"	"12/96"	"12"	"96"	"288869.435424805"	"HCD"	"MS2"	"28.98826"	"7.7"	"100.000"	"103.0693"	"36809"	"36809"	"36778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.1"	""	"12.6"	""	"10.6"	""	"10.4"	""	"13.7"	"18.0"	""	"766"	"47"	"35.000"	"28.000"	"0.000757179372162843"	"23"	"0"	"1.498E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"734.91400"	"1468.82073"	"1468.82087"	"-0.10"	"-0.00007"	"9/96"	"9"	"96"	"838387.532958984"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"103.2358"	"36889"	"36889"	"36873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.8"	""	"41.4"	""	"41.8"	""	"63.8"	""	"66.0"	"64.7"	""	"742"	"48"	"35.000"	"28.000"	"0.00062283629072347"	"24"	"0"	"1.686E-06"	"1.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPELALDTPR"	"[K].dLPELALDTPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"Q9JID1"	"Programmed cell death protein 4 OS=Rattus norvegicus OX=10116 GN=Pdcd4 PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"734.91425"	"1468.82121"	"1468.82087"	"0.23"	"0.00017"	"8/96"	"8"	"96"	"842917.564147949"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"103.0394"	"36796"	"36796"	"36778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.2"	""	"41.4"	""	"40.5"	""	"66.4"	""	"69.9"	"65.2"	""	"725"	"42"	"35.000"	"28.000"	"0.0023190387786246"	"23"	"0"	"4.381E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.7547"	"0.0000"	"1"	"1"	"1"	"490.28516"	"1468.84092"	"1468.84334"	"-1.65"	"-0.00081"	"9/116"	"9"	"116"	"6092065.57537842"	"HCD"	"MS2"	"13.50897"	"106.1"	"100.000"	"48.6699"	"14814"	"14814"	"14801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.7"	""	"154.0"	""	"150.9"	""	"151.1"	""	"219.4"	"195.8"	""	"648"	"53"	"35.000"	"28.000"	"0.000173598117034323"	""	"0"	"5.717E-08"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.7018"	"0.0000"	"1"	"1"	"1"	"490.28537"	"1468.84156"	"1468.84334"	"-1.22"	"-0.00060"	"12/116"	"12"	"116"	"5845658.05950928"	"HCD"	"MS2"	"10.35283"	"85.0"	"100.000"	"49.0069"	"14915"	"14915"	"14903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.3"	""	"112.3"	""	"111.9"	""	"125.9"	""	"177.0"	"171.0"	""	"630"	"57"	"34.000"	"27.000"	"6.24181013128606E-05"	""	"0"	"3.14E-08"	"1.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"490.28552"	"1468.84201"	"1468.84334"	"-0.90"	"-0.00044"	"9/116"	"9"	"116"	"6983274.06781006"	"HCD"	"MS2"	"2.93712"	"61.9"	"100.000"	"48.9658"	"14933"	"14933"	"14915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.6"	""	"83.8"	""	"87.4"	""	"100.9"	"6.5"	"109.1"	"113.0"	""	"647"	"55"	"35.000"	"28.000"	"9.74707448824211E-05"	""	"0"	"1.331E-07"	"1.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"490.28564"	"1468.84238"	"1468.84334"	"-0.65"	"-0.00032"	"12/116"	"12"	"116"	"6589945.12689209"	"HCD"	"MS2"	"3.189904"	"59.2"	"100.000"	"49.3100"	"15038"	"15038"	"15026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.6"	""	"75.9"	""	"81.0"	""	"105.7"	"1.5"	"113.8"	"107.8"	""	"644"	"53"	"35.000"	"28.000"	"0.000170159371071608"	""	"0"	"5.639E-08"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"734.92493"	"1468.84258"	"1468.84334"	"-0.52"	"-0.00038"	"11/116"	"11"	"116"	"2295764.52935791"	"HCD"	"MS2"	"0"	"97.9"	"100.000"	"48.5943"	"14784"	"14784"	"14766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.8"	""	"162.0"	""	"129.5"	""	"188.2"	""	"189.3"	"174.8"	""	"640"	"61"	"35.000"	"28.000"	"2.41629512852939E-05"	"21"	"0"	"1.467E-07"	"1.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"734.92523"	"1468.84319"	"1468.84334"	"-0.11"	"-0.00008"	"11/116"	"11"	"116"	"12029150.3496704"	"HCD"	"MS2"	"0"	"359.6"	"85.143"	"49.1723"	"14983"	"14983"	"14968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"325.2"	""	"589.3"	""	"478.0"	""	"643.0"	"3.3"	"696.6"	"676.5"	""	"645"	"70"	"35.000"	"28.000"	"3.36147370979341E-06"	"24"	"0"	"1.049E-08"	"1.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"734.92535"	"1468.84343"	"1468.84334"	"0.06"	"0.00004"	"11/116"	"11"	"116"	"10827426.3961182"	"HCD"	"MS2"	"0"	"376.8"	"94.064"	"48.8856"	"14901"	"14901"	"14890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"344.0"	""	"586.9"	""	"493.6"	""	"645.1"	""	"756.0"	"753.3"	""	"643"	"71"	"35.000"	"28.000"	"2.32906161164109E-06"	"23"	"0"	"3.381E-08"	"1.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLR"	"[R].tANLGAGAAQPLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9219"	"0.0000"	"1"	"1"	"1"	"734.92572"	"1468.84416"	"1468.84334"	"0.56"	"0.00041"	"11/116"	"11"	"116"	"1359631.05206299"	"HCD"	"MS2"	"0"	"64.5"	"100.000"	"48.8969"	"14871"	"14871"	"14851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.3"	""	"97.6"	""	"87.8"	""	"118.4"	""	"124.9"	"122.8"	""	"635"	"64"	"35.000"	"28.000"	"1.35438997219506E-05"	"21"	"0"	"2.953E-07"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETIPPVSLLR"	"[K].dETIPPVSLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.93158"	"1468.85588"	"1468.85726"	"-0.94"	"-0.00069"	"6/94"	"6"	"94"	"143753.76373291"	"HCD"	"MS2"	"44.78148"	"8.0"	"100.000"	"104.2507"	"37299"	"37299"	"37273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"10.7"	""	"7.1"	""	"17.9"	""	"15.9"	"16.2"	""	"580"	"10"	"34.000"	"27.000"	"3.12174911952652"	"13"	"0.001316"	"0.01043"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETIPPVSLLR"	"[K].dETIPPVSLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"734.93219"	"1468.85710"	"1468.85726"	"-0.11"	"-0.00008"	"5/94"	"5"	"94"	"241684.02734375"	"HCD"	"MS2"	"32.53452"	"12.1"	"100.000"	"104.2953"	"37299"	"37299"	"37286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"15.0"	""	"13.0"	""	"23.8"	""	"23.9"	"28.8"	""	"550"	"13"	"34.000"	"27.000"	"1.34379398819279"	"15"	"0.001488"	"0.01263"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETIPPVSLLR"	"[K].dETIPPVSLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.93225"	"1468.85723"	"1468.85726"	"-0.02"	"-0.00002"	"3/94"	"3"	"94"	"157452.750488281"	"HCD"	"MS2"	"33.83996"	"8.9"	"100.000"	"103.9787"	"37172"	"37172"	"37149"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.6"	""	"8.2"	""	"11.1"	""	"16.9"	""	"25.3"	"14.9"	""	"550"	"5"	"34.000"	"27.000"	"8.67626271428023"	"13"	"0.006885"	"0.08649"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETIPPVSLLR"	"[K].dETIPPVSLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"3"	"734.93225"	"1468.85723"	"1468.85726"	"-0.02"	"-0.00002"	"6/94"	"6"	"94"	"231637.66796875"	"HCD"	"MS2"	"38.0316"	"11.6"	"100.000"	"104.5444"	"37417"	"37417"	"37398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"11.6"	""	"14.6"	""	"22.7"	""	"24.5"	"23.9"	""	"550"	"9"	"34.000"	"27.000"	"3.32914486726383"	"18"	"0.0001991"	"0.003089"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETIPPVSLLR"	"[K].dETIPPVSLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"734.93304"	"1468.85881"	"1468.85726"	"1.06"	"0.00078"	"6/94"	"6"	"94"	"133872.622070313"	"HCD"	"MS2"	"13.53384"	"7.0"	"100.000"	"104.8756"	"37548"	"37548"	"37532"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.0"	""	"9.1"	""	"10.3"	""	"12.9"	""	"13.0"	"12.0"	""	"549"	"12"	"34.000"	"27.000"	"1.61265827269424"	"22"	"0.0001991"	"0.005796"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETIPPVSLLR"	"[K].dETIPPVSLLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"O55171"	"Acyl-coenzyme A thioesterase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acot2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.93317"	"1468.85906"	"1468.85726"	"1.22"	"0.00090"	"6/94"	"6"	"94"	"111036.883361816"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"104.6172"	"37426"	"37426"	"37403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.7"	""	"11.8"	""	"9.2"	""	"12.2"	""	"13.5"	"18.0"	""	"549"	"12"	"34.000"	"27.000"	"1.81778430266134"	"13"	"0.001348"	"0.01151"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAPEYEK"	"[K].qFAPEYEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"735.40485"	"1469.80242"	"1469.80405"	"-1.11"	"-0.00082"	"6/74"	"6"	"74"	"1527432.76123047"	"HCD"	"MS2"	"0"	"130.1"	"100.000"	"63.1841"	"20673"	"20673"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"229.9"	""	"124.9"	""	"150.9"	""	"219.1"	""	"250.9"	"258.9"	""	"756"	"44"	"35.000"	"28.000"	"0.00161991340710232"	""	"0.0001686"	"0.001386"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAPEYEK"	"[K].qFAPEYEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"490.60571"	"1469.80259"	"1469.80405"	"-1.00"	"-0.00049"	"9/74"	"9"	"74"	"1135415.08917236"	"HCD"	"MS2"	"16.34679"	"41.7"	"100.000"	"63.1956"	"20678"	"20678"	"20654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"46.3"	""	"43.8"	""	"75.3"	""	"85.9"	"87.0"	""	"751"	"31"	"35.000"	"28.000"	"0.0316672201540486"	"22"	"0.001999"	"0.01738"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAPEYEK"	"[K].qFAPEYEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"490.60620"	"1469.80405"	"1469.80405"	"0.00"	"0.00000"	"9/74"	"9"	"74"	"1142177.48181152"	"HCD"	"MS2"	"13.41578"	"42.0"	"100.000"	"63.1620"	"20696"	"20696"	"20673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.2"	""	"49.4"	""	"46.1"	""	"69.2"	"0.8"	"88.8"	"81.8"	""	"756"	"31"	"35.000"	"28.000"	"0.0315857940891412"	"21"	"0.0001991"	"0.00593"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFAPEYEK"	"[K].qFAPEYEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"735.40588"	"1469.80449"	"1469.80405"	"0.30"	"0.00022"	"10/74"	"10"	"74"	"1419794.7487793"	"HCD"	"MS2"	"0"	"117.9"	"100.000"	"63.1135"	"20676"	"20676"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.5"	""	"120.7"	""	"126.3"	""	"198.5"	"2.6"	"236.2"	"227.7"	""	"749"	"31"	"35.000"	"28.000"	"0.0320222483975314"	"23"	"0.0001991"	"0.002283"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLYSVESK"	"[R].aDLYSVESk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"490.61279"	"1469.82383"	"1469.82518"	"-0.92"	"-0.00045"	"7/76"	"7"	"76"	"1197033.88171387"	"HCD"	"MS2"	"56.92791"	"46.5"	"100.000"	"71.3751"	"23997"	"23997"	"23974"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.9"	""	"51.3"	""	"57.4"	""	"66.6"	"0.2"	"116.2"	"91.9"	""	"749"	"17"	"35.000"	"28.000"	"0.721858079990007"	"14"	"0.002189"	"0.0212"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLYSVESK"	"[R].aDLYSVESk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"490.61310"	"1469.82474"	"1469.82518"	"-0.30"	"-0.00015"	"7/76"	"7"	"76"	"703880.146057129"	"HCD"	"MS2"	"47.78945"	"33.4"	"100.000"	"71.8305"	"24214"	"24214"	"24187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"25.2"	""	"28.9"	""	"33.4"	""	"178.8"	"34.6"	""	"739"	"10"	"35.000"	"28.000"	"4.00510994730835"	"20"	"0.002328"	"0.02213"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLYSVESK"	"[R].aDLYSVESk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"490.61322"	"1469.82511"	"1469.82518"	"-0.05"	"-0.00002"	"7/76"	"7"	"76"	"898253.209899902"	"HCD"	"MS2"	"62.4801"	"42.1"	"100.000"	"71.7295"	"24142"	"24142"	"24116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"37.0"	""	"27.3"	""	"31.9"	""	"235.8"	"50.3"	""	"738"	"9"	"35.000"	"28.000"	"4.40581610547317"	"21"	"0.002525"	"0.02506"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLYSVESK"	"[R].aDLYSVESk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"735.41656"	"1469.82585"	"1469.82518"	"0.46"	"0.00034"	"8/76"	"8"	"76"	"1031533.07525635"	"HCD"	"MS2"	"19.20022"	"77.8"	"100.000"	"71.6212"	"24128"	"24128"	"24107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.0"	""	"101.1"	""	"101.0"	""	"117.1"	"1.5"	"139.2"	"149.5"	""	"749"	"53"	"35.000"	"28.000"	"0.000171179527010771"	"24"	"0"	"7.326E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLYSVESK"	"[R].aDLYSVESk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"490.61356"	"1469.82611"	"1469.82518"	"0.64"	"0.00031"	"7/76"	"7"	"76"	"1109501.06414795"	"HCD"	"MS2"	"50.83025"	"44.4"	"100.000"	"71.4462"	"24057"	"24057"	"24034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"51.6"	""	"51.1"	""	"66.7"	""	"117.0"	"79.3"	""	"749"	"18"	"35.000"	"28.000"	"0.603186790374263"	"19"	"0.001453"	"0.0116"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADLYSVESK"	"[R].aDLYSVESk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"735.41724"	"1469.82720"	"1469.82518"	"1.37"	"0.00101"	"8/76"	"8"	"76"	"1030963.73718262"	"HCD"	"MS2"	"19.36991"	"81.4"	"100.000"	"71.5205"	"24056"	"24056"	"24037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.0"	""	"105.7"	""	"116.4"	""	"128.8"	"1.7"	"145.2"	"141.0"	""	"750"	"51"	"35.000"	"28.000"	"0.000271038676350814"	"24"	"0"	"4.985E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDPIYVK"	"[K].yNDPIYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"490.61789"	"1469.83911"	"1469.84044"	"-0.90"	"-0.00044"	"5/68"	"5"	"68"	"879612.340270996"	"HCD"	"MS2"	"0"	"36.2"	"100.000"	"76.8737"	"26260"	"26260"	"26234"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.5"	""	"42.5"	""	"51.5"	""	"58.8"	""	"66.4"	"75.4"	""	"659"	"22"	"35.000"	"28.000"	"0.187437040713046"	"23"	"0.0001991"	"0.003838"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDPIYVK"	"[K].yNDPIYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"735.42322"	"1469.83916"	"1469.84044"	"-0.87"	"-0.00064"	"7/68"	"7"	"68"	"1185350.57537842"	"HCD"	"MS2"	"0"	"100.2"	"100.000"	"76.9756"	"26269"	"26269"	"26259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.0"	""	"120.9"	""	"131.0"	""	"160.1"	"0.3"	"177.7"	"207.3"	""	"661"	"38"	"35.000"	"28.000"	"0.00484363561435928"	"23"	"9.9E-05"	"0.0008598"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDPIYVK"	"[K].yNDPIYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"735.42346"	"1469.83965"	"1469.84044"	"-0.54"	"-0.00039"	"6/68"	"6"	"68"	"1112021.17474365"	"HCD"	"MS2"	"0"	"89.9"	"100.000"	"77.0632"	"26335"	"26335"	"26325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.1"	""	"115.6"	""	"120.1"	""	"142.5"	""	"178.3"	"176.7"	""	"664"	"17"	"35.000"	"28.000"	"0.695245335342497"	"20"	"0.001049"	"0.008757"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDPIYVK"	"[K].yNDPIYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"490.61823"	"1469.84012"	"1469.84044"	"-0.21"	"-0.00011"	"5/68"	"5"	"68"	"901249.334594727"	"HCD"	"MS2"	"38.66114"	"37.8"	"100.000"	"76.7876"	"26194"	"26194"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"49.1"	""	"54.4"	""	"57.1"	"0.4"	"73.9"	"71.4"	""	"664"	"21"	"35.000"	"28.000"	"0.246115000111905"	"19"	"0.0001686"	"0.001905"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDPIYVK"	"[K].yNDPIYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.7297"	"0.0000"	"1"	"1"	"1"	"735.42371"	"1469.84014"	"1469.84044"	"-0.21"	"-0.00015"	"7/68"	"7"	"68"	"1166572.59747314"	"HCD"	"MS2"	"15.1779"	"99.6"	"100.000"	"76.7958"	"26228"	"26228"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.0"	""	"125.7"	""	"135.2"	""	"151.9"	""	"185.8"	"192.3"	""	"652"	"37"	"35.000"	"28.000"	"0.0059049687019399"	"25"	"9.9E-05"	"0.0006296"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNDPIYVK"	"[K].yNDPIYVk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"2"	"P52303"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1"	"P52303; P62944"	"AP-1 complex subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Ap1b1 PE=1 SV=1; AP-2 complex subunit beta OS=Rattus norvegicus OX=10116 GN=Ap2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"735.42432"	"1469.84136"	"1469.84044"	"0.63"	"0.00046"	"7/68"	"7"	"68"	"1170526.36987305"	"HCD"	"MS2"	"9.179046"	"102.8"	"100.000"	"76.7096"	"26162"	"26162"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"166.2"	""	"138.0"	""	"152.4"	""	"147.1"	""	"177.9"	"192.5"	""	"638"	"40"	"35.000"	"28.000"	"0.00343392403147918"	"23"	"9.9E-05"	"0.0007178"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNIIPVIEDAR"	"[R].tNIIPVIEDAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"490.62183"	"1469.85093"	"1469.85251"	"-1.08"	"-0.00053"	"11/114"	"11"	"114"	"320991.781860352"	"HCD"	"MS2"	"48.17849"	"7.9"	"100.000"	"100.5790"	"35828"	"35828"	"35801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.4"	""	"10.4"	""	"8.3"	""	"12.9"	""	"19.9"	"14.3"	""	"603"	"31"	"34.000"	"27.000"	"0.0232963196406354"	"16"	"9.9E-05"	"0.0006915"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNIIPVIEDAR"	"[R].tNIIPVIEDAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"735.42950"	"1469.85173"	"1469.85251"	"-0.53"	"-0.00039"	"9/114"	"9"	"114"	"505652.949768066"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"100.3679"	"35714"	"35714"	"35692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"27.3"	""	"30.6"	""	"38.2"	""	"43.2"	"55.1"	""	"594"	"32"	"34.000"	"27.000"	"0.0170512589275576"	"18"	"9.9E-05"	"0.0006299"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNIIPVIEDAR"	"[R].tNIIPVIEDAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"2"	"2"	"0.1250"	"0.0000"	"1"	"1"	"3"	"735.42999"	"1469.85271"	"1469.85251"	"0.14"	"0.00010"	"5/114"	"5"	"114"	"186721.208679199"	"HCD"	"MS2"	"16.63699"	"10.4"	"100.000"	"100.8028"	"35919"	"35919"	"35893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.3"	""	"14.2"	""	"14.1"	""	"19.9"	""	"21.2"	"18.4"	""	"588"	"8"	"34.000"	"27.000"	"4.60624814611796"	"20"	"0.006267"	"0.07773"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNIIPVIEDAR"	"[R].tNIIPVIEDAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"735.43066"	"1469.85405"	"1469.85251"	"1.05"	"0.00077"	"5/114"	"5"	"114"	"174388.424438477"	"HCD"	"MS2"	"14.9107"	"10.4"	"100.000"	"100.6839"	"35843"	"35843"	"35819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"13.0"	""	"14.9"	""	"18.7"	""	"19.2"	"18.6"	""	"586"	"13"	"34.000"	"27.000"	"1.57713046277273"	"14"	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNIIPVIEDAR"	"[R].tNIIPVIEDAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"735.43140"	"1469.85552"	"1469.85251"	"2.05"	"0.00150"	"9/114"	"9"	"114"	"538551.096557617"	"HCD"	"MS2"	"8.056459"	"24.1"	"100.000"	"100.4913"	"35792"	"35792"	"35769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.8"	""	"31.4"	""	"27.7"	""	"32.9"	""	"51.6"	"55.9"	""	"593"	"33"	"34.000"	"27.000"	"0.0163690960746745"	"16"	"0.0001991"	"0.003488"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMAEIYK"	"[K].eImAEIYk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"2"	"2"	"0.4138"	"0.0000"	"1"	"1"	"1"	"735.91669"	"1470.82610"	"1470.82782"	"-1.17"	"-0.00086"	"7/64"	"7"	"64"	"506032.079650879"	"HCD"	"MS2"	"11.42622"	"38.3"	"100.000"	"75.5931"	"25739"	"25739"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"32.3"	""	"39.7"	""	"108.2"	"2.5"	"82.4"	"60.2"	""	"737"	"29"	"35.000"	"28.000"	"0.0452311356681873"	""	"0.0065"	"0.08055"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMAEIYK"	"[K].eImAEIYk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"735.91687"	"1470.82646"	"1470.82782"	"-0.92"	"-0.00068"	"7/64"	"7"	"64"	"490383.68536377"	"HCD"	"MS2"	"9.37456"	"38.3"	"100.000"	"75.4583"	"25653"	"25653"	"25631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"42.0"	""	"34.4"	""	"106.3"	""	"71.9"	"78.3"	""	"741"	"28"	"35.000"	"28.000"	"0.0629199273237077"	""	"0.003818"	"0.04113"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMAEIYK"	"[K].eImAEIYk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"735.91693"	"1470.82659"	"1470.82782"	"-0.84"	"-0.00062"	"12/64"	"12"	"64"	"401773.304138184"	"HCD"	"MS2"	"20.04123"	"29.2"	"100.000"	"75.7690"	"25779"	"25779"	"25759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"22.6"	""	"28.5"	""	"79.2"	""	"54.7"	"67.2"	""	"741"	"31"	"35.000"	"28.000"	"0.0262898563030436"	"22"	"0.004213"	"0.04747"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"735.91785"	"1470.82842"	"1470.83166"	"-2.21"	"-0.00162"	"8/96"	"8"	"96"	"310317.801696777"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"34.9473"	"9215"	"9215"	"9199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"22.1"	""	"20.6"	""	"39.6"	""	"49.9"	"48.6"	""	"731"	"47"	"35.000"	"28.000"	"0.000749699776360744"	"19"	"0.0001686"	"0.001077"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIMAEIYK"	"[K].eImAEIYk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"P00787"	"Cathepsin B OS=Rattus norvegicus OX=10116 GN=Ctsb PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"735.91852"	"1470.82976"	"1470.82782"	"1.32"	"0.00097"	"7/64"	"7"	"64"	"257531.41607666"	"HCD"	"MS2"	"7.075833"	"21.3"	"100.000"	"75.9337"	"25878"	"25878"	"25849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"15.1"	""	"20.4"	""	"63.1"	""	"43.9"	"42.6"	""	"731"	"28"	"35.000"	"28.000"	"0.0606579014668428"	"25"	"0.005308"	"0.06808"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"735.91876"	"1470.83025"	"1470.83166"	"-0.96"	"-0.00071"	"10/96"	"10"	"96"	"1148458.61309814"	"HCD"	"MS2"	"0"	"72.5"	"100.000"	"34.6651"	"9102"	"9102"	"9076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.4"	""	"73.2"	""	"90.4"	""	"134.4"	"0.5"	"151.9"	"147.7"	""	"731"	"65"	"35.000"	"28.000"	"1.25570429957404E-05"	"27"	"0"	"8.925E-07"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"735.91913"	"1470.83098"	"1470.83166"	"-0.46"	"-0.00034"	"8/96"	"8"	"96"	"431685.052001953"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"34.8027"	"9194"	"9194"	"9179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"29.8"	""	"28.8"	""	"59.9"	""	"63.1"	"69.4"	""	"718"	"53"	"35.000"	"28.000"	"0.000188405878229668"	"17"	"0"	"2.268E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPAAAPATGNK"	"[R].dPAAAPATGNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"735.91974"	"1470.83220"	"1470.83166"	"0.37"	"0.00027"	"9/96"	"9"	"96"	"683655.649536133"	"HCD"	"MS2"	"0"	"44.6"	"100.000"	"34.5065"	"9074"	"9074"	"9044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"48.4"	""	"61.6"	""	"74.8"	"0.8"	"92.6"	"84.1"	""	"697"	"61"	"35.000"	"28.000"	"2.5015131050807E-05"	"18"	"0"	"2.037E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYMDPTGK"	"[K].tTYMDPTGk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"736.39557"	"1471.78386"	"1471.78669"	"-1.92"	"-0.00141"	"8/76"	"8"	"76"	"483827.336914063"	"HCD"	"MS2"	"0"	"41.1"	"100.000"	"57.4128"	"18327"	"18327"	"18300"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"63.3"	""	"66.1"	""	"44.1"	"0.3"	"74.5"	"79.3"	""	"823"	"33"	"36.000"	"29.000"	"0.0196051351070429"	"19"	"0.0001686"	"0.001094"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGmSAFVEk.[R]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"736.39575"	"1471.78423"	"1471.78669"	"-1.67"	"-0.00123"	"13/78"	"13"	"78"	"520646.866821289"	"HCD"	"MS2"	"0"	"42.1"	"100.000"	"50.4012"	"15518"	"15518"	"15492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"57.6"	""	"57.2"	""	"89.7"	""	"65.9"	"72.8"	""	"822"	"27"	"36.000"	"29.000"	"0.0763557631042688"	"21"	"0.004959"	"0.06167"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGmSAFVEk.[R]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.5946"	"0.0000"	"1"	"1"	"1"	"736.39709"	"1471.78691"	"1471.78669"	"0.15"	"0.00011"	"8/78"	"8"	"78"	"483275.256652832"	"HCD"	"MS2"	"0"	"42.1"	"100.000"	"50.7221"	"15614"	"15614"	"15590"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"51.7"	""	"61.0"	""	"91.8"	""	"63.7"	"76.4"	""	"836"	"37"	"36.000"	"29.000"	"0.00867313850296152"	""	"0.002834"	"0.02976"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSAFVEK"	"[R].eGmSAFVEk.[R]"	"N-Term(TMT6plex); M3(Oxidation); K9(TMT6plex)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"736.39746"	"1471.78765"	"1471.78669"	"0.65"	"0.00048"	"8/78"	"8"	"78"	"577368.784118652"	"HCD"	"MS2"	"0"	"47.9"	"100.000"	"50.6977"	"15638"	"15638"	"15619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"69.3"	""	"59.9"	""	"105.6"	"2.5"	"75.2"	"76.5"	""	"833"	"40"	"36.000"	"29.000"	"0.00450417240715591"	""	"0.002286"	"0.0215"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"491.26907"	"1471.79267"	"1471.79539"	"-1.85"	"-0.00091"	"7/106"	"7"	"106"	"415320.634887695"	"HCD"	"MS2"	"26.18717"	"16.6"	"100.000"	"87.8394"	"30688"	"30688"	"30665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"22.4"	""	"22.4"	""	"27.7"	""	"29.2"	"28.4"	""	"832"	"17"	"36.000"	"29.000"	"0.905927265298913"	"15"	"0.0001686"	"0.001959"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"491.26913"	"1471.79285"	"1471.79539"	"-1.72"	"-0.00085"	"5/106"	"5"	"106"	"502884.549682617"	"HCD"	"MS2"	"75.44052"	"27.3"	"100.000"	"87.9902"	"30712"	"30712"	"30693"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"44.3"	""	"32.9"	""	"47.2"	""	"48.8"	"38.9"	""	"832"	"1"	"36.000"	"29.000"	"35.4073423892188"	"13"	"0.001596"	"0.01305"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"736.40039"	"1471.79350"	"1471.79539"	"-1.28"	"-0.00094"	"7/106"	"7"	"106"	"530237.262268066"	"HCD"	"MS2"	"3.521555"	"25.7"	"100.000"	"87.9730"	"30742"	"30742"	"30726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"26.5"	"2.0"	"38.6"	""	"36.2"	""	"45.4"	"53.2"	""	"842"	"39"	"36.000"	"29.000"	"0.00582481445547119"	"22"	"0"	"0.0001052"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"736.40063"	"1471.79399"	"1471.79539"	"-0.95"	"-0.00070"	"11/106"	"11"	"106"	"2847762.80419922"	"HCD"	"MS2"	"1.99143"	"117.0"	"100.000"	"87.7529"	"30618"	"30618"	"30603"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.8"	""	"156.5"	""	"152.8"	""	"195.3"	"0.9"	"207.6"	"202.7"	""	"860"	"52"	"36.000"	"29.000"	"0.000251459736182127"	"29"	"0"	"3.53E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"736.40070"	"1471.79411"	"1471.79539"	"-0.87"	"-0.00064"	"12/106"	"12"	"106"	"1579595.92449951"	"HCD"	"MS2"	"31.66832"	"78.6"	"100.000"	"87.3809"	"30502"	"30502"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.5"	""	"106.7"	""	"110.7"	""	"137.4"	"0.5"	"130.8"	"132.7"	""	"859"	"37"	"36.000"	"29.000"	"0.00769065214308159"	"23"	"0"	"5.872E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"491.26965"	"1471.79441"	"1471.79539"	"-0.67"	"-0.00033"	"12/106"	"12"	"106"	"881352.799560547"	"HCD"	"MS2"	"68.69128"	"25.7"	"100.000"	"87.4981"	"30550"	"30550"	"30530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"50.5"	""	"38.4"	""	"42.0"	""	"38.7"	"41.8"	""	"856"	"28"	"36.000"	"29.000"	"0.0689356331856301"	"17"	"0"	"0.0001202"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"736.40088"	"1471.79448"	"1471.79539"	"-0.62"	"-0.00045"	"7/106"	"7"	"106"	"630193.044067383"	"HCD"	"MS2"	"2.566013"	"29.0"	"100.000"	"88.0411"	"30732"	"30732"	"30714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.1"	""	"43.3"	""	"44.4"	""	"42.4"	""	"55.5"	"54.4"	""	"856"	"39"	"36.000"	"29.000"	"0.00553915820140594"	"26"	"0"	"7.517E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"736.40100"	"1471.79473"	"1471.79539"	"-0.45"	"-0.00033"	"11/106"	"11"	"106"	"1506973.98400879"	"HCD"	"MS2"	"22.05085"	"69.6"	"100.000"	"87.4598"	"30499"	"30499"	"30482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.2"	""	"100.4"	""	"97.8"	""	"117.5"	""	"111.1"	"120.6"	""	"847"	"46"	"36.000"	"29.000"	"0.00111906010872584"	"24"	"0"	"1.524E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"736.40100"	"1471.79473"	"1471.79539"	"-0.45"	"-0.00033"	"11/106"	"11"	"106"	"2937370.2600708"	"HCD"	"MS2"	"2.47796"	"110.3"	"100.000"	"87.6780"	"30622"	"30622"	"30609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.7"	""	"157.0"	""	"164.9"	""	"190.9"	""	"178.8"	"181.6"	""	"847"	"49"	"36.000"	"29.000"	"0.000482895785032155"	"27"	"0"	"2.97E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDIGIPDATGR"	"[R].eVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.26984"	"1471.79496"	"1471.79539"	"-0.29"	"-0.00014"	"8/106"	"8"	"106"	"838613.862487793"	"HCD"	"MS2"	"42.35549"	"23.5"	"100.000"	"87.6237"	"30565"	"30565"	"30546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.4"	""	"33.6"	""	"32.7"	""	"34.1"	""	"41.8"	"48.5"	""	"847"	"27"	"36.000"	"29.000"	"0.0816306800736362"	"14"	"0"	"0.0001873"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGGGGVGGPGAK"	"[K].eAGGGGVGGPGAk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"736.41595"	"1471.82463"	"1471.82691"	"-1.55"	"-0.00114"	"11/96"	"11"	"96"	"423625.820739746"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"32.1119"	"8066"	"8066"	"8051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.4"	""	"63.3"	""	"60.3"	""	"48.5"	""	"46.9"	"38.8"	""	"781"	"93"	"35.000"	"28.000"	"1.90818746323377E-08"	""	"0"	"9.309E-08"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAGGGGVGGPGAK"	"[K].eAGGGGVGGPGAk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"Q6AXS5"	"Plasminogen activator inhibitor 1 RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Serbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"736.41827"	"1471.82927"	"1471.82691"	"1.60"	"0.00118"	"14/96"	"14"	"96"	"269669.677978516"	"HCD"	"MS2"	"100"	"21.8"	"100.000"	"31.9809"	"8051"	"8051"	"8032"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.1"	""	"40.3"	""	"39.7"	""	"30.9"	""	"27.5"	"27.8"	""	"798"	"46"	"36.000"	"29.000"	"0.000979428857358327"	"22"	"0"	"0.0001649"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGQISGLNVLR"	"[K].dAGQISGLNVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.6774"	"0.0000"	"1"	"1"	"1"	"491.28485"	"1471.84000"	"1471.84301"	"-2.04"	"-0.00100"	"14/114"	"14"	"114"	"605365.274230957"	"HCD"	"MS2"	"53.41092"	"24.7"	"100.000"	"90.2324"	"31614"	"31614"	"31595"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"29.6"	""	"35.0"	""	"44.1"	"2.0"	"48.4"	"46.0"	""	"789"	"31"	"35.000"	"28.000"	"0.0335001697401826"	"25"	"0"	"0.0001321"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"491.28491"	"1471.84018"	"1471.84301"	"-1.92"	"-0.00094"	"15/120"	"15"	"120"	"1003548.60870361"	"HCD"	"MS2"	"28.26852"	"23.9"	"100.000"	"67.8286"	"22588"	"22588"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.1"	""	"30.2"	""	"38.0"	""	"38.3"	""	"46.1"	"45.2"	""	"779"	"54"	"35.000"	"28.000"	"0.000162744927808859"	"26"	"0"	"5.951E-07"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"491.28534"	"1471.84146"	"1471.84301"	"-1.05"	"-0.00051"	"17/120"	"17"	"120"	"922742.49597168"	"HCD"	"MS2"	"22.7186"	"25.0"	"100.000"	"67.8135"	"22551"	"22551"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.4"	""	"34.3"	""	"32.3"	""	"42.8"	""	"42.2"	"52.3"	""	"755"	"57"	"35.000"	"28.000"	"6.99708187839091E-05"	"28"	"0"	"9.001E-07"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"491.28555"	"1471.84211"	"1471.84301"	"-0.61"	"-0.00030"	"15/120"	"15"	"120"	"941912.093566895"	"HCD"	"MS2"	"23.96319"	"21.8"	"100.000"	"67.5198"	"22463"	"22463"	"22448"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"26.0"	""	"35.9"	""	"37.1"	""	"41.7"	"40.3"	""	"751"	"57"	"35.000"	"28.000"	"8.04655420720582E-05"	"26"	"0"	"3.833E-07"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"736.42493"	"1471.84258"	"1471.84301"	"-0.29"	"-0.00022"	"11/120"	"11"	"120"	"556123.803894043"	"HCD"	"MS2"	"51.8759"	"28.6"	"100.000"	"67.4300"	"22427"	"22427"	"22400"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.7"	""	"41.5"	""	"36.7"	""	"50.6"	""	"45.2"	"52.7"	""	"744"	"64"	"35.000"	"28.000"	"1.65784124403871E-05"	"25"	"0"	"1.806E-07"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"736.42505"	"1471.84282"	"1471.84301"	"-0.13"	"-0.00009"	"10/120"	"10"	"120"	"594355.164245605"	"HCD"	"MS2"	"44.96811"	"32.4"	"100.000"	"67.3944"	"22381"	"22381"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.8"	""	"44.1"	""	"49.6"	""	"58.4"	""	"54.0"	"56.9"	""	"750"	"54"	"35.000"	"28.000"	"0.000135528698489855"	"26"	"0"	"9.31E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"3"	"3"	"0.8226"	"0.0000"	"1"	"1"	"1"	"491.28583"	"1471.84293"	"1471.84301"	"-0.05"	"-0.00003"	"17/120"	"17"	"120"	"953693.724975586"	"HCD"	"MS2"	"22.83815"	"21.2"	"100.000"	"67.4772"	"22415"	"22415"	"22391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"22.0"	""	"28.9"	""	"36.9"	""	"39.9"	"43.4"	""	"750"	"62"	"35.000"	"28.000"	"2.48903651400716E-05"	"27"	"0"	"3.286E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"2"	"2"	"0.8451"	"0.0000"	"1"	"1"	"1"	"736.42511"	"1471.84294"	"1471.84301"	"-0.04"	"-0.00003"	"12/120"	"12"	"120"	"1318924.85296631"	"HCD"	"MS2"	"11.82698"	"58.5"	"100.000"	"67.7114"	"22540"	"22540"	"22525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.0"	""	"92.1"	""	"88.6"	""	"83.2"	"0.6"	"91.4"	"107.0"	""	"750"	"71"	"35.000"	"28.000"	"2.95822544106958E-06"	"28"	"0"	"2.44E-08"	"1.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGNLGGGVVTIER"	"[K].aGNLGGGVVTIER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"P47198"	"60S ribosomal protein L22 OS=Rattus norvegicus OX=10116 GN=Rpl22 PE=2 SV=2"	"0"	"2"	"2"	"0.8784"	"0.0000"	"1"	"1"	"1"	"736.42517"	"1471.84307"	"1471.84301"	"0.04"	"0.00003"	"12/120"	"12"	"120"	"1211522.6416626"	"HCD"	"MS2"	"13.62639"	"59.6"	"100.000"	"67.6914"	"22501"	"22501"	"22483"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.0"	""	"86.8"	""	"95.3"	""	"95.2"	"0.9"	"112.5"	"96.2"	""	"750"	"74"	"35.000"	"28.000"	"1.40614875842056E-06"	"26"	"0"	"5.051E-09"	"1.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.86255"	"1472.71782"	"1472.72189"	"-2.76"	"-0.00203"	"11/94"	"11"	"94"	"293674.108520508"	"HCD"	"MS2"	"14.46073"	"22.5"	"100.000"	"90.5763"	"31751"	"31751"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.3"	""	"32.0"	""	"36.7"	""	"33.1"	""	"43.4"	"40.3"	""	"467"	"11"	"33.000"	"26.000"	"1.94664556608685"	"15"	"0.0001991"	"0.004945"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.86407"	"1472.72087"	"1472.72189"	"-0.69"	"-0.00051"	"8/94"	"8"	"94"	"353935.802001953"	"HCD"	"MS2"	"12.40377"	"25.8"	"100.000"	"90.4460"	"31737"	"31737"	"31726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.1"	"2.1"	"36.2"	""	"36.6"	""	"34.6"	""	"48.5"	"46.4"	""	"484"	"13"	"33.000"	"26.000"	"1.10360933660214"	"13"	"0.0001991"	"0.004703"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.86444"	"1472.72161"	"1472.72189"	"-0.19"	"-0.00014"	"8/94"	"8"	"94"	"1849638.03833008"	"HCD"	"MS2"	"18.7473"	"106.5"	"100.000"	"90.1737"	"31628"	"31628"	"31609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.2"	""	"119.8"	""	"146.5"	""	"188.6"	""	"187.9"	"203.7"	""	"488"	"39"	"33.000"	"26.000"	"0.00331428480967265"	"15"	"0"	"2.147E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"736.86487"	"1472.72246"	"1472.72189"	"0.39"	"0.00029"	"8/94"	"8"	"94"	"1257847.43145752"	"HCD"	"MS2"	"35.7063"	"81.8"	"100.000"	"89.8858"	"31513"	"31513"	"31497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.5"	""	"105.2"	""	"106.0"	""	"155.1"	""	"139.6"	"148.0"	""	"491"	"30"	"33.000"	"26.000"	"0.0257662666234145"	"18"	"0"	"3.636E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"736.86542"	"1472.72356"	"1472.72189"	"1.13"	"0.00083"	"9/94"	"9"	"94"	"1691009.40789795"	"HCD"	"MS2"	"21.58807"	"99.1"	"100.000"	"90.2786"	"31633"	"31633"	"31617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.6"	""	"120.0"	""	"141.4"	""	"145.8"	""	"181.8"	"190.2"	""	"503"	"39"	"34.000"	"27.000"	"0.00322506141537989"	"18"	"0"	"2.499E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDYLNAESR"	"[K].fEDYLNAESR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.86560"	"1472.72392"	"1472.72189"	"1.38"	"0.00102"	"9/94"	"9"	"94"	"1322944.00463867"	"HCD"	"MS2"	"29.23426"	"86.1"	"100.000"	"89.9837"	"31513"	"31513"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.3"	""	"108.9"	""	"111.5"	""	"153.5"	""	"143.3"	"167.7"	""	"505"	"24"	"34.000"	"27.000"	"0.104775895765177"	"17"	"0"	"0.0001095"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYPDFNFVGR"	"[K].eYPDFNFVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"736.87213"	"1472.73699"	"1472.73715"	"-0.11"	"-0.00008"	"12/86"	"12"	"86"	"707413.438110352"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"102.5367"	"36616"	"36616"	"36598"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.1"	""	"42.4"	""	"47.5"	""	"66.6"	"0.4"	"78.5"	"68.1"	""	"559"	"29"	"34.000"	"27.000"	"0.0337583966912345"	"23"	"0.0001991"	"0.002603"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYPDFNFVGR"	"[K].eYPDFNFVGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"Q91XU1"	"Protein quaking OS=Rattus norvegicus OX=10116 GN=Qki PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.87268"	"1472.73808"	"1472.73715"	"0.64"	"0.00047"	"9/86"	"9"	"86"	"599798.12902832"	"HCD"	"MS2"	"5.398718"	"32.3"	"100.000"	"102.3150"	"36503"	"36503"	"36486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.4"	""	"36.1"	""	"44.8"	""	"59.7"	""	"55.5"	"70.5"	""	"568"	"34"	"34.000"	"27.000"	"0.0122833928013942"	"15"	"0.0001686"	"0.001346"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEYMEGGNK"	"[R].sEYMEGGNk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"736.87494"	"1472.74260"	"1472.74555"	"-2.00"	"-0.00147"	"5/74"	"5"	"74"	"143672.316955566"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"40.5054"	"11467"	"11467"	"11448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"13.1"	""	"17.3"	""	"19.6"	""	"26.4"	"34.1"	""	"621"	"20"	"34.000"	"27.000"	"0.33578524187801"	"15"	"0.002462"	"0.02322"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"736.87610"	"1472.74492"	"1472.74555"	"-0.43"	"-0.00032"	"8/88"	"8"	"88"	"861428.823364258"	"HCD"	"MS2"	"0"	"66.2"	"100.000"	"42.9018"	"12472"	"12472"	"12443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.8"	""	"68.8"	""	"81.3"	""	"188.0"	"1.5"	"113.2"	"95.3"	""	"624"	"35"	"34.000"	"27.000"	"0.0103312909902568"	"20"	"0.003001"	"0.03231"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNDAFGDTK"	"[R].mNDAFGDTk.[F]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"736.87610"	"1472.74492"	"1472.74555"	"-0.43"	"-0.00032"	"8/88"	"8"	"88"	"878124.567993164"	"HCD"	"MS2"	"0"	"67.0"	"100.000"	"43.0790"	"12510"	"12510"	"12489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.5"	""	"64.7"	""	"80.2"	""	"186.0"	"0.8"	"125.4"	"105.6"	""	"624"	"41"	"34.000"	"27.000"	"0.0027236706693709"	"21"	"0.006577"	"0.08209"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEYMEGGNK"	"[R].sEYMEGGNk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"736.87659"	"1472.74590"	"1472.74555"	"0.24"	"0.00017"	"5/74"	"5"	"74"	"159576.418701172"	"HCD"	"MS2"	"32.87353"	"15.3"	"100.000"	"40.4099"	"11463"	"11463"	"11434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"15.4"	""	"22.7"	""	"21.4"	""	"31.9"	"32.3"	""	"628"	"17"	"34.000"	"27.000"	"0.66516539646803"	"14"	"0.001999"	"0.01738"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEETLAHFR"	"[R].qIEETLAHFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"491.60660"	"1472.80524"	"1472.80589"	"-0.44"	"-0.00022"	"13/94"	"13"	"94"	"532738.155517578"	"HCD"	"MS2"	"66.22866"	"18.2"	"100.000"	"77.7366"	"26573"	"26573"	"26549"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"19.6"	""	"24.7"	""	"23.4"	""	"31.3"	"53.2"	""	"811"	"41"	"36.000"	"29.000"	"0.00329602774304542"	"23"	"0"	"5.099E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEETLAHFR"	"[R].qIEETLAHFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"491.60681"	"1472.80588"	"1472.80589"	"-0.01"	"0.00000"	"6/94"	"6"	"94"	"838532.674560547"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"78.1238"	"26730"	"26730"	"26710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"37.8"	""	"31.3"	""	"39.7"	""	"47.8"	"46.3"	""	"811"	"32"	"36.000"	"29.000"	"0.0261210637166404"	"22"	"9.9E-05"	"0.0007241"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIEETLAHFR"	"[R].qIEETLAHFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"491.60684"	"1472.80597"	"1472.80589"	"0.05"	"0.00003"	"11/94"	"11"	"94"	"568827.528869629"	"HCD"	"MS2"	"16.86612"	"14.8"	"100.000"	"77.8931"	"26664"	"26664"	"26641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.6"	""	"16.8"	""	"23.5"	""	"21.3"	""	"21.6"	"37.3"	""	"811"	"46"	"36.000"	"29.000"	"0.00091409400052781"	"26"	"0"	"9.156E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"736.91107"	"1472.81487"	"1472.81579"	"-0.63"	"-0.00046"	"8/96"	"8"	"96"	"549699.639648438"	"HCD"	"MS2"	"9.611335"	"27.7"	"100.000"	"110.0942"	"39558"	"39558"	"39540"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"28.1"	""	"31.1"	""	"56.5"	""	"55.8"	"57.9"	""	"834"	"55"	"36.000"	"29.000"	"0.000139680588128814"	""	"0"	"7.972E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQLVEEELDR"	"[R].iQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"0"	"2"	"2"	"0.4902"	"0.0000"	"1"	"1"	"1"	"736.91132"	"1472.81536"	"1472.81579"	"-0.29"	"-0.00022"	"14/96"	"14"	"96"	"345882.561645508"	"HCD"	"MS2"	"13.5915"	"18.0"	"100.000"	"109.8488"	"39447"	"39447"	"39433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"21.0"	""	"23.8"	""	"37.3"	""	"33.0"	"39.1"	""	"826"	"51"	"36.000"	"29.000"	"0.000308283337223357"	""	"0"	"4.995E-06"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"3"	"3"	"0.3810"	"0.0000"	"1"	"1"	"1"	"491.61612"	"1472.83380"	"1472.83608"	"-1.54"	"-0.00076"	"8/88"	"8"	"88"	"1152449.06512451"	"HCD"	"MS2"	"42.24167"	"39.7"	"100.000"	"78.3378"	"26844"	"26844"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.6"	""	"46.3"	""	"51.8"	""	"72.2"	"0.6"	"76.5"	"68.4"	""	"794"	"21"	"35.000"	"28.000"	"0.31534830918554"	"27"	"0.0001991"	"0.003229"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"736.92065"	"1472.83403"	"1472.83608"	"-1.39"	"-0.00102"	"9/86"	"9"	"86"	"308511.47454834"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"42.4053"	"12235"	"12235"	"12216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.7"	""	"24.9"	""	"29.2"	""	"40.5"	""	"40.5"	"48.0"	""	"870"	"49"	"36.000"	"29.000"	"0.000537637133548362"	"27"	"0"	"0.0003617"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"3"	"3"	"0.3810"	"0.0000"	"1"	"1"	"1"	"491.61642"	"1472.83472"	"1472.83608"	"-0.92"	"-0.00045"	"9/88"	"9"	"88"	"1070825.95422363"	"HCD"	"MS2"	"45.41282"	"39.8"	"100.000"	"78.2065"	"26764"	"26764"	"26742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.7"	""	"45.0"	""	"50.7"	""	"77.2"	""	"65.7"	"76.2"	""	"869"	"21"	"36.000"	"29.000"	"0.3273329924423"	"27"	"0.0001991"	"0.005548"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"491.61649"	"1472.83490"	"1472.83608"	"-0.80"	"-0.00039"	"8/88"	"8"	"88"	"1086675.73675537"	"HCD"	"MS2"	"9.096133"	"43.0"	"100.000"	"78.5084"	"26887"	"26887"	"26866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.8"	""	"48.1"	""	"54.5"	""	"73.7"	""	"87.9"	"81.8"	""	"869"	"34"	"36.000"	"29.000"	"0.0191421088193597"	"22"	"0.0001686"	"0.001495"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"736.92126"	"1472.83525"	"1472.83608"	"-0.56"	"-0.00041"	"7/86"	"7"	"86"	"5396464.06536865"	"HCD"	"MS2"	"0"	"277.9"	"100.000"	"41.8050"	"11990"	"11990"	"11970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.5"	""	"337.3"	""	"325.3"	""	"478.6"	""	"570.9"	"594.0"	""	"869"	"56"	"36.000"	"29.000"	"0.000122458738363441"	""	"0"	"2.832E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.92133"	"1472.83537"	"1472.83608"	"-0.48"	"-0.00035"	"14/88"	"14"	"88"	"701444.211791992"	"HCD"	"MS2"	"2.522974"	"54.9"	"100.000"	"78.7667"	"27019"	"27019"	"26999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.5"	""	"57.0"	""	"71.5"	""	"93.7"	"0.8"	"104.4"	"104.1"	""	"850"	"44"	"36.000"	"29.000"	"0.00180879325581841"	"23"	"0"	"6.216E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"736.92133"	"1472.83537"	"1472.83608"	"-0.48"	"-0.00035"	"7/86"	"7"	"86"	"2914160.67004395"	"HCD"	"MS2"	"0"	"154.4"	"100.000"	"41.9450"	"12082"	"12082"	"12065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.5"	""	"175.7"	""	"187.1"	""	"260.5"	""	"324.2"	"345.8"	""	"850"	"52"	"36.000"	"29.000"	"0.000246257195981425"	""	"0"	"1.064E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"736.92133"	"1472.83537"	"1472.83608"	"-0.48"	"-0.00035"	"9/86"	"9"	"86"	"5125900.97271729"	"HCD"	"MS2"	"0"	"269.3"	"100.000"	"41.6474"	"11960"	"11960"	"11939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"343.3"	""	"292.4"	""	"308.3"	""	"473.0"	""	"557.9"	"590.4"	""	"850"	"46"	"36.000"	"29.000"	"0.0010974605810197"	"22"	"0"	"1.626E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"736.92139"	"1472.83550"	"1472.83608"	"-0.40"	"-0.00029"	"7/86"	"7"	"86"	"2827416.43890381"	"HCD"	"MS2"	"0"	"159.2"	"100.000"	"42.0901"	"12106"	"12106"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.8"	""	"175.1"	""	"195.1"	""	"289.2"	""	"328.0"	"351.9"	""	"850"	"52"	"36.000"	"29.000"	"0.000252574167411619"	""	"0"	"4.979E-06"	"0.922"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"491.61673"	"1472.83564"	"1472.83608"	"-0.30"	"-0.00015"	"11/86"	"11"	"86"	"8813714.90710449"	"HCD"	"MS2"	"33.02"	"268.4"	"100.000"	"41.7261"	"11992"	"11992"	"11971"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"338.4"	""	"332.1"	""	"317.5"	""	"454.0"	""	"557.1"	"550.0"	""	"850"	"49"	"36.000"	"29.000"	"0.000560259113886474"	"22"	"0"	"5.383E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"736.92151"	"1472.83574"	"1472.83608"	"-0.23"	"-0.00017"	"14/88"	"14"	"88"	"2158101.20550537"	"HCD"	"MS2"	"0"	"146.8"	"100.000"	"78.4231"	"26853"	"26853"	"26836"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.9"	""	"179.0"	""	"169.7"	""	"250.7"	""	"280.8"	"255.6"	""	"850"	"44"	"36.000"	"29.000"	"0.00174336743769308"	"23"	"0"	"7.404E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"736.92163"	"1472.83599"	"1472.83608"	"-0.06"	"-0.00005"	"14/88"	"14"	"88"	"2170755.00506592"	"HCD"	"MS2"	"0"	"147.4"	"100.000"	"78.4506"	"26890"	"26890"	"26871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.1"	""	"171.4"	""	"184.7"	""	"244.3"	""	"265.5"	"265.4"	""	"850"	"46"	"36.000"	"29.000"	"0.00119230929612948"	"23"	"0"	"6.17E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"491.61688"	"1472.83609"	"1472.83608"	"0.01"	"0.00000"	"8/88"	"8"	"88"	"985099.065429688"	"HCD"	"MS2"	"4.729086"	"38.3"	"100.000"	"78.6535"	"26973"	"26973"	"26951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.5"	""	"41.6"	""	"55.3"	""	"68.6"	"1.4"	"64.7"	"67.4"	""	"850"	"30"	"36.000"	"29.000"	"0.0398463852943499"	"22"	"0.0001991"	"0.002285"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"736.92169"	"1472.83611"	"1472.83608"	"0.02"	"0.00001"	"11/88"	"11"	"88"	"338140.14251709"	"HCD"	"MS2"	"4.419651"	"28.8"	"100.000"	"78.7459"	"26984"	"26984"	"26961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.4"	""	"43.3"	""	"29.5"	"2.0"	"41.9"	""	"57.6"	"55.7"	""	"850"	"27"	"36.000"	"29.000"	"0.0900303482480614"	"16"	"0.002525"	"0.02451"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"491.61697"	"1472.83637"	"1472.83608"	"0.20"	"0.00010"	"11/86"	"11"	"86"	"8508967.79144287"	"HCD"	"MS2"	"17.93589"	"265.7"	"100.000"	"41.9427"	"12046"	"12046"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"312.3"	""	"312.4"	""	"313.3"	""	"482.3"	""	"533.9"	"573.1"	""	"823"	"51"	"36.000"	"29.000"	"0.000292664360868345"	"23"	"0"	"3.208E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"736.92194"	"1472.83660"	"1472.83608"	"0.35"	"0.00026"	"8/88"	"8"	"88"	"678112.970947266"	"HCD"	"MS2"	"0"	"54.3"	"100.000"	"78.1212"	"26729"	"26729"	"26710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.4"	""	"65.3"	""	"64.3"	""	"94.5"	""	"100.9"	"94.7"	""	"822"	"53"	"36.000"	"29.000"	"0.000218696494558652"	"24"	"0"	"1.242E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPNALDEK"	"[R].dLPNALDEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"Q66HA6"	"ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus OX=10116 GN=Arl8b PE=2 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"736.92279"	"1472.83830"	"1472.83608"	"1.51"	"0.00111"	"11/88"	"11"	"88"	"348531.137878418"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"78.1396"	"26764"	"26764"	"26742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"35.1"	""	"26.9"	""	"53.0"	""	"53.9"	"48.7"	""	"830"	"29"	"36.000"	"29.000"	"0.0509387280930739"	"22"	"0.001615"	"0.01487"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVPSTAEGK"	"[K].ePVPSTAEGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"736.92285"	"1472.83843"	"1472.83608"	"1.59"	"0.00117"	"8/86"	"8"	"86"	"349504.890563965"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"42.2923"	"12223"	"12223"	"12199"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"35.2"	""	"39.9"	""	"48.1"	"0.3"	"55.7"	"55.6"	""	"830"	"36"	"36.000"	"29.000"	"0.00995515661393088"	"26"	"0.0001991"	"0.002505"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDAYELK"	"[R].lYDAYELk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"491.61768"	"1472.83847"	"1472.84010"	"-1.11"	"-0.00054"	"5/62"	"5"	"62"	"464755.76159668"	"HCD"	"MS2"	"43.94833"	"18.0"	"100.000"	"99.2907"	"35276"	"35276"	"35254"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"23.0"	""	"26.4"	""	"29.0"	"1.3"	"30.9"	"34.2"	""	"830"	"16"	"36.000"	"29.000"	"0.993226038908236"	"18"	"0.001951"	"0.01669"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDAYELK"	"[R].lYDAYELk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"736.92358"	"1472.83989"	"1472.84010"	"-0.14"	"-0.00011"	"7/62"	"7"	"62"	"306004.291564941"	"HCD"	"MS2"	"9.344415"	"32.9"	"100.000"	"99.5411"	"35406"	"35406"	"35385"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.1"	""	"44.5"	""	"40.8"	""	"55.7"	""	"62.1"	"65.3"	""	"815"	"43"	"36.000"	"29.000"	"0.00194593179015509"	"23"	"0"	"0.0002504"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"491.61823"	"1472.84012"	"1472.84228"	"-1.46"	"-0.00072"	"14/96"	"14"	"96"	"2683036.56066895"	"HCD"	"MS2"	"22.96177"	"44.7"	"100.000"	"57.8978"	"18560"	"18560"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"54.5"	""	"52.3"	""	"79.8"	"0.1"	"99.2"	"77.2"	""	"817"	"49"	"36.000"	"29.000"	"0.00057304939831356"	"20"	"0"	"2.092E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDAYELK"	"[R].lYDAYELk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"736.92371"	"1472.84014"	"1472.84010"	"0.02"	"0.00002"	"7/62"	"7"	"62"	"316070.221923828"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"99.4961"	"35359"	"35359"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.8"	""	"31.4"	""	"37.0"	""	"48.3"	""	"59.6"	"52.4"	""	"817"	"35"	"36.000"	"29.000"	"0.0136833381895973"	"22"	"9.9E-05"	"0.0008099"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LYDAYELK"	"[R].lYDAYELk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"736.92371"	"1472.84014"	"1472.84010"	"0.02"	"0.00002"	"8/62"	"8"	"62"	"397142.667358398"	"HCD"	"MS2"	"100"	"36.2"	"100.000"	"99.1178"	"35206"	"35206"	"35183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"57.4"	""	"53.5"	""	"59.7"	""	"59.0"	"71.6"	""	"817"	"11"	"36.000"	"29.000"	"3.12026917591487"	"18"	"0.001488"	"0.01215"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDAYELK"	"[R].lYDAYELk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"736.92383"	"1472.84038"	"1472.84010"	"0.19"	"0.00014"	"12/62"	"12"	"62"	"668083.987060547"	"HCD"	"MS2"	"32.6804"	"60.5"	"100.000"	"99.2180"	"35276"	"35276"	"35255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.6"	""	"83.3"	""	"86.3"	""	"94.5"	""	"95.9"	"120.8"	""	"803"	"34"	"36.000"	"29.000"	"0.0155126341287209"	"21"	"9.9E-05"	"0.0009462"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61832"	"1472.84040"	"1472.84228"	"-1.28"	"-0.00063"	"14/96"	"14"	"96"	"3385853.62548828"	"HCD"	"MS2"	"15.24725"	"47.3"	"100.000"	"58.1561"	"18630"	"18630"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"66.1"	""	"64.7"	""	"81.3"	""	"94.6"	"87.8"	""	"803"	"50"	"36.000"	"29.000"	"0.000418490447901412"	"16"	"0"	"2.702E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61838"	"1472.84058"	"1472.84228"	"-1.15"	"-0.00057"	"13/96"	"13"	"96"	"1824048.16442871"	"HCD"	"MS2"	"22.86407"	"42.2"	"100.000"	"57.5576"	"18386"	"18386"	"18362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"79.5"	""	"56.6"	""	"61.1"	""	"75.9"	"73.6"	""	"805"	"39"	"36.000"	"29.000"	"0.00489514865260163"	"15"	"0"	"1.611E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61841"	"1472.84067"	"1472.84228"	"-1.09"	"-0.00054"	"14/96"	"14"	"96"	"8816003.78088379"	"HCD"	"MS2"	"5.465815"	"73.5"	"100.000"	"57.8496"	"18505"	"18505"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.6"	""	"95.1"	""	"90.1"	""	"129.6"	""	"140.1"	"149.2"	""	"805"	"47"	"36.000"	"29.000"	"0.000795730280145024"	"15"	"0"	"5.4E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYDAYELK"	"[R].lYDAYELk.[H]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"736.92401"	"1472.84075"	"1472.84010"	"0.44"	"0.00032"	"12/62"	"12"	"62"	"723581.526306152"	"HCD"	"MS2"	"38.24844"	"67.0"	"100.000"	"99.1754"	"35229"	"35229"	"35210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.4"	""	"96.2"	""	"91.2"	""	"116.4"	""	"116.0"	"118.4"	""	"805"	"33"	"36.000"	"29.000"	"0.0226342383389116"	"26"	"9.9E-05"	"0.0006564"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61850"	"1472.84095"	"1472.84228"	"-0.91"	"-0.00044"	"13/96"	"13"	"96"	"2484973.45928955"	"HCD"	"MS2"	"12.59504"	"44.6"	"100.000"	"57.2997"	"18316"	"18316"	"18295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.2"	""	"83.9"	""	"55.2"	""	"65.9"	""	"77.0"	"77.7"	""	"804"	"43"	"36.000"	"29.000"	"0.00181646089638719"	"15"	"0"	"1.539E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"736.92413"	"1472.84099"	"1472.84228"	"-0.88"	"-0.00064"	"8/96"	"8"	"96"	"1365542.54284668"	"HCD"	"MS2"	"38.78839"	"78.8"	"100.000"	"57.5461"	"18381"	"18381"	"18362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.9"	""	"116.6"	""	"112.5"	""	"109.3"	""	"146.0"	"145.4"	""	"804"	"26"	"36.000"	"29.000"	"0.101210612495906"	"15"	"9.9E-05"	"0.000491"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"736.92450"	"1472.84172"	"1472.84228"	"-0.38"	"-0.00028"	"11/96"	"11"	"96"	"7004732.36529541"	"HCD"	"MS2"	"0.6520544"	"246.0"	"100.000"	"57.8429"	"18503"	"18503"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"304.0"	""	"308.0"	""	"331.6"	""	"431.6"	"1.3"	"470.1"	"487.1"	""	"801"	"54"	"36.000"	"29.000"	"0.00017123893590371"	"20"	"0"	"6.242E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.92462"	"1472.84197"	"1472.84228"	"-0.21"	"-0.00016"	"6/96"	"6"	"96"	"1554556.33325195"	"HCD"	"MS2"	"36.49031"	"82.7"	"100.000"	"57.2652"	"18302"	"18302"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.4"	""	"126.0"	""	"119.5"	""	"119.7"	""	"139.4"	"155.2"	""	"801"	"22"	"36.000"	"29.000"	"0.257396430785466"	"14"	"9.9E-05"	"0.0007213"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"736.92462"	"1472.84197"	"1472.84228"	"-0.21"	"-0.00016"	"7/96"	"7"	"96"	"2764067.24926758"	"HCD"	"MS2"	"8.62628"	"114.9"	"100.000"	"57.8587"	"18544"	"18544"	"18530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.8"	""	"144.9"	""	"138.6"	""	"206.9"	""	"218.6"	"235.5"	""	"801"	"34"	"36.000"	"29.000"	"0.0150522880417522"	"18"	"0"	"3.923E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.61887"	"1472.84204"	"1472.84228"	"-0.16"	"-0.00008"	"14/96"	"14"	"96"	"9041282.60296631"	"HCD"	"MS2"	"4.658343"	"74.8"	"100.000"	"57.5896"	"18435"	"18435"	"18418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.7"	""	"105.7"	""	"95.7"	""	"121.1"	""	"159.2"	"141.0"	""	"803"	"51"	"36.000"	"29.000"	"0.0002848954738373"	"16"	"0"	"1.219E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"736.92474"	"1472.84221"	"1472.84228"	"-0.05"	"-0.00003"	"9/96"	"9"	"96"	"2978935.66967773"	"HCD"	"MS2"	"7.513593"	"131.5"	"100.000"	"58.1467"	"18627"	"18627"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.1"	""	"165.8"	""	"158.3"	""	"228.1"	""	"254.6"	"266.0"	""	"803"	"39"	"36.000"	"29.000"	"0.00565829452566383"	"18"	"0"	"4.24E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPLPAAPPAAPER"	"[R].gPLPAAPPAAPER.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"Q9JK11"	"Reticulon-4 OS=Rattus norvegicus OX=10116 GN=Rtn4 PE=1 SV=1"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"736.92505"	"1472.84282"	"1472.84228"	"0.37"	"0.00027"	"9/96"	"9"	"96"	"7110660.64300537"	"HCD"	"MS2"	"0.4313079"	"248.0"	"100.000"	"57.5505"	"18419"	"18419"	"18403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"321.1"	""	"308.6"	""	"332.0"	""	"416.6"	"0.2"	"484.1"	"489.9"	""	"789"	"49"	"35.000"	"28.000"	"0.00055468574826925"	"19"	"0"	"1.171E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"736.92847"	"1472.84966"	"1472.85471"	"-3.43"	"-0.00253"	"6/72"	"6"	"72"	"355198.647888184"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"55.1116"	"17399"	"17399"	"17374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.3"	""	"40.2"	""	"29.8"	""	"30.4"	""	"40.1"	"44.6"	""	"810"	"23"	"36.000"	"29.000"	"0.19608980887156"	"17"	"0.008893"	"0.1151"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"736.92908"	"1472.85088"	"1472.85471"	"-2.60"	"-0.00191"	"7/72"	"7"	"72"	"317001.752929688"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"55.0657"	"17380"	"17380"	"17358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.6"	""	"42.0"	""	"33.3"	""	"29.0"	""	"32.7"	"38.4"	""	"799"	"34"	"36.000"	"29.000"	"0.0168856111399108"	"19"	"0.003495"	"0.03838"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.92957"	"1472.85185"	"1472.85471"	"-1.94"	"-0.00143"	"7/72"	"7"	"72"	"329516.26751709"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"52.8434"	"16474"	"16474"	"16448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"39.5"	""	"42.5"	""	"30.2"	""	"43.6"	"41.4"	""	"790"	"16"	"35.000"	"28.000"	"0.941016190396682"	"14"	"0.008893"	"0.1139"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.92987"	"1472.85246"	"1472.85471"	"-1.52"	"-0.00112"	"7/72"	"7"	"72"	"327315.25769043"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"57.2151"	"18247"	"18247"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"42.7"	""	"29.3"	""	"25.5"	"0.9"	"40.2"	"36.0"	""	"787"	"35"	"35.000"	"28.000"	"0.0127921851521168"	"15"	"0.003818"	"0.04193"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"491.62234"	"1472.85248"	"1472.85471"	"-1.51"	"-0.00074"	"9/72"	"9"	"72"	"3054130.8515625"	"HCD"	"MS2"	"22.50442"	"93.1"	"100.000"	"48.9908"	"14909"	"14909"	"14887"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.8"	""	"153.4"	""	"108.9"	""	"204.1"	""	"154.6"	"119.3"	""	"787"	"33"	"35.000"	"28.000"	"0.0187044411408494"	"15"	"0"	"0.0002737"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93005"	"1472.85283"	"1472.85471"	"-1.27"	"-0.00094"	"7/72"	"7"	"72"	"356884.576904297"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"56.9662"	"18181"	"18181"	"18153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"42.9"	""	"38.1"	""	"30.7"	""	"42.6"	"44.8"	""	"788"	"35"	"35.000"	"28.000"	"0.0114155337355432"	"15"	"0.00307"	"0.03328"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93005"	"1472.85283"	"1472.85471"	"-1.27"	"-0.00094"	"6/72"	"6"	"72"	"294953.676208496"	"HCD"	"MS2"	"14.78003"	"23.7"	"100.000"	"52.4293"	"16339"	"16339"	"16310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"43.4"	""	"35.8"	""	"28.1"	""	"43.6"	"38.9"	""	"788"	"21"	"35.000"	"28.000"	"0.282810950760917"	"14"	"0.004998"	"0.06342"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"736.93005"	"1472.85283"	"1472.85471"	"-1.27"	"-0.00094"	"6/72"	"6"	"72"	"274366.189453125"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"53.7365"	"16839"	"16839"	"16809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"39.9"	""	"27.6"	""	"24.6"	""	"33.0"	"39.6"	""	"788"	"23"	"35.000"	"28.000"	"0.203937091788524"	"21"	"0.006343"	"0.0795"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93018"	"1472.85307"	"1472.85471"	"-1.11"	"-0.00082"	"8/72"	"8"	"72"	"289554.582946777"	"HCD"	"MS2"	"0"	"22.4"	"100.000"	"53.5570"	"16799"	"16799"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.7"	""	"38.2"	""	"28.7"	""	"29.5"	"1.1"	"35.2"	"37.0"	""	"788"	"42"	"35.000"	"28.000"	"0.00242379687847688"	"15"	"0.001103"	"0.009175"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"736.93024"	"1472.85320"	"1472.85471"	"-1.03"	"-0.00076"	"6/72"	"6"	"72"	"309154.01940918"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"54.3094"	"17106"	"17106"	"17079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"42.4"	""	"35.3"	""	"36.4"	"1.8"	"40.7"	"35.0"	""	"788"	"28"	"35.000"	"28.000"	"0.0699030655470726"	"19"	"0.004959"	"0.0622"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93024"	"1472.85320"	"1472.85471"	"-1.03"	"-0.00076"	"6/72"	"6"	"72"	"296639.395446777"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"54.9297"	"17359"	"17359"	"17332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"41.4"	""	"35.7"	""	"30.3"	""	"35.4"	"33.9"	""	"788"	"18"	"35.000"	"28.000"	"0.643422467470368"	"14"	"0.009239"	"0.1191"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"736.93030"	"1472.85332"	"1472.85471"	"-0.94"	"-0.00069"	"8/72"	"8"	"72"	"468643.580871582"	"HCD"	"MS2"	"35.30914"	"27.8"	"100.000"	"56.6007"	"17998"	"17998"	"17983"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.1"	""	"49.0"	""	"30.7"	""	"34.1"	""	"60.8"	"39.8"	""	"792"	"29"	"35.000"	"28.000"	"0.0459933651080776"	"22"	"0.002462"	"0.02327"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93048"	"1472.85369"	"1472.85471"	"-0.69"	"-0.00051"	"6/72"	"6"	"72"	"238196.450744629"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"62.1343"	"20279"	"20279"	"20255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"28.1"	""	"26.3"	""	"28.7"	""	"34.5"	"30.8"	""	"792"	"27"	"35.000"	"28.000"	"0.0781079403501482"	"14"	"0.00296"	"0.03191"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93048"	"1472.85369"	"1472.85471"	"-0.69"	"-0.00051"	"6/72"	"6"	"72"	"412915.803955078"	"HCD"	"MS2"	"52.95087"	"28.8"	"100.000"	"59.3595"	"19121"	"19121"	"19098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"47.4"	""	"28.7"	""	"45.8"	""	"50.3"	"48.2"	""	"792"	"21"	"35.000"	"28.000"	"0.329378453356658"	"14"	"0.00511"	"0.06545"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93066"	"1472.85405"	"1472.85471"	"-0.45"	"-0.00033"	"6/72"	"6"	"72"	"243724.296386719"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"53.1635"	"16639"	"16639"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"30.0"	""	"30.4"	""	"30.4"	""	"35.1"	"36.0"	""	"787"	"29"	"35.000"	"28.000"	"0.0486345315060415"	"14"	"0.00296"	"0.032"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93066"	"1472.85405"	"1472.85471"	"-0.45"	"-0.00033"	"7/72"	"7"	"72"	"291317.570800781"	"HCD"	"MS2"	"40.60835"	"22.2"	"100.000"	"59.3639"	"19158"	"19158"	"19134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"39.3"	""	"30.1"	""	"26.3"	""	"39.3"	"42.5"	""	"787"	"29"	"35.000"	"28.000"	"0.0498821009215063"	"14"	"0.001872"	"0.0156"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93066"	"1472.85405"	"1472.85471"	"-0.45"	"-0.00033"	"6/72"	"6"	"72"	"292048.034362793"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"49.5864"	"15186"	"15186"	"15157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"29.0"	""	"25.4"	""	"44.7"	"0.9"	"42.7"	"46.7"	""	"787"	"24"	"35.000"	"28.000"	"0.171373922295271"	"14"	"0.006267"	"0.07722"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93073"	"1472.85417"	"1472.85471"	"-0.36"	"-0.00027"	"10/72"	"10"	"72"	"347608.119506836"	"HCD"	"MS2"	"20.06783"	"25.0"	"100.000"	"55.3713"	"17505"	"17505"	"17480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.5"	""	"40.2"	""	"33.9"	""	"37.7"	""	"40.6"	"39.6"	""	"791"	"30"	"35.000"	"28.000"	"0.0373376076571083"	"14"	"0.00394"	"0.04287"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93073"	"1472.85417"	"1472.85471"	"-0.36"	"-0.00027"	"7/72"	"7"	"72"	"429701.789001465"	"HCD"	"MS2"	"30.54624"	"34.0"	"100.000"	"58.7656"	"18879"	"18879"	"18855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.4"	""	"58.9"	""	"45.9"	""	"47.3"	""	"59.3"	"57.1"	""	"791"	"22"	"35.000"	"28.000"	"0.276150915812521"	"14"	"0.007069"	"0.08948"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"736.93073"	"1472.85417"	"1472.85471"	"-0.36"	"-0.00027"	"7/72"	"7"	"72"	"423863.272766113"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"56.2601"	"17896"	"17896"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.0"	""	"50.5"	""	"39.4"	""	"33.5"	""	"50.8"	"48.8"	""	"791"	"24"	"35.000"	"28.000"	"0.160378625769836"	"20"	"0.005712"	"0.07111"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"736.93073"	"1472.85417"	"1472.85471"	"-0.36"	"-0.00027"	"8/72"	"8"	"72"	"1658274.90472412"	"HCD"	"MS2"	"0"	"96.9"	"100.000"	"49.7282"	"15208"	"15208"	"15193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.9"	""	"138.2"	""	"102.9"	""	"245.7"	""	"151.5"	"149.4"	""	"791"	"47"	"35.000"	"28.000"	"0.000718036444626775"	"23"	"9.9E-05"	"0.0009729"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"736.93079"	"1472.85430"	"1472.85471"	"-0.28"	"-0.00021"	"6/72"	"6"	"72"	"340458.273071289"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"56.2387"	"17853"	"17853"	"17836"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.8"	""	"46.7"	""	"28.6"	""	"33.3"	"0.6"	"41.0"	"39.8"	""	"840"	"24"	"36.000"	"29.000"	"0.165672066871617"	"17"	"0.005712"	"0.071"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93085"	"1472.85442"	"1472.85471"	"-0.20"	"-0.00014"	"9/72"	"9"	"72"	"292414.6171875"	"HCD"	"MS2"	"20.87415"	"23.1"	"100.000"	"54.6958"	"17230"	"17230"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.7"	""	"39.3"	""	"28.1"	""	"39.3"	""	"34.0"	"35.2"	""	"840"	"25"	"36.000"	"29.000"	"0.138436079114532"	"14"	"0.004213"	"0.04623"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"736.93097"	"1472.85466"	"1472.85471"	"-0.03"	"-0.00002"	"6/72"	"6"	"72"	"344812.442932129"	"HCD"	"MS2"	"34.29031"	"22.1"	"100.000"	"56.6269"	"18043"	"18043"	"18025"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.6"	""	"43.0"	""	"23.1"	""	"30.1"	"1.0"	"34.3"	"36.7"	""	"840"	"16"	"36.000"	"29.000"	"1.13566251292571"	"17"	"0.007443"	"0.09533"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93097"	"1472.85466"	"1472.85471"	"-0.03"	"-0.00002"	"6/72"	"6"	"72"	"335812.497924805"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"54.6151"	"17231"	"17231"	"17204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.2"	""	"45.2"	""	"34.5"	""	"30.7"	"0.8"	"44.5"	"38.9"	""	"840"	"19"	"36.000"	"29.000"	"0.485567141720681"	"14"	"0.007443"	"0.09483"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.93109"	"1472.85491"	"1472.85471"	"0.13"	"0.00010"	"7/72"	"7"	"72"	"264716.689086914"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"53.4189"	"16709"	"16709"	"16682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.0"	""	"38.0"	""	"31.9"	"2.1"	"33.5"	"2.0"	"38.3"	"29.4"	""	"828"	"36"	"36.000"	"29.000"	"0.0113501170717814"	"15"	"0.001261"	"0.01001"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"736.93121"	"1472.85515"	"1472.85471"	"0.30"	"0.00022"	"6/72"	"6"	"72"	"286773.964660645"	"HCD"	"MS2"	"28.15611"	"23.7"	"100.000"	"59.6816"	"19252"	"19252"	"19232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"38.6"	""	"31.0"	""	"35.6"	""	"38.5"	"41.9"	""	"828"	"19"	"36.000"	"29.000"	"0.528445666847896"	"16"	"0.006267"	"0.07746"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"736.93121"	"1472.85515"	"1472.85471"	"0.30"	"0.00022"	"9/72"	"9"	"72"	"284514.817382813"	"HCD"	"MS2"	"63.33927"	"20.2"	"100.000"	"52.0929"	"16202"	"16202"	"16171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"27.7"	""	"23.1"	""	"25.8"	""	"38.1"	"47.4"	""	"828"	"14"	"36.000"	"29.000"	"1.81134151535516"	"14"	"0.004959"	"0.06294"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"736.93127"	"1472.85527"	"1472.85471"	"0.38"	"0.00028"	"8/72"	"8"	"72"	"3719361.38348389"	"HCD"	"MS2"	"0"	"185.2"	"100.000"	"49.4431"	"15092"	"15092"	"15076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.6"	""	"275.8"	""	"184.2"	""	"496.6"	"0.1"	"288.2"	"243.7"	""	"828"	"44"	"36.000"	"29.000"	"0.00162929731238692"	"20"	"0.0001686"	"0.00162"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"491.62332"	"1472.85541"	"1472.85471"	"0.48"	"0.00023"	"9/72"	"9"	"72"	"765038.247924805"	"HCD"	"MS2"	"46.81862"	"36.7"	"100.000"	"58.5929"	"18809"	"18809"	"18782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"56.3"	""	"50.2"	""	"68.8"	"0.9"	"67.0"	"57.0"	""	"828"	"31"	"36.000"	"29.000"	"0.0351560716665034"	"20"	"0"	"0.0002266"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGMAPVAK"	"[R].vEPGmAPVAk.[L]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"736.93146"	"1472.85564"	"1472.85471"	"0.63"	"0.00047"	"8/72"	"8"	"72"	"4454314.82836914"	"HCD"	"MS2"	"0"	"217.4"	"100.000"	"49.1384"	"15003"	"15003"	"14985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.4"	""	"343.2"	""	"228.4"	""	"579.2"	"2.0"	"323.2"	"286.2"	""	"822"	"46"	"36.000"	"29.000"	"0.00115835538474969"	"20"	"0"	"3.455E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"736.95734"	"1472.90740"	"1472.90885"	"-0.99"	"-0.00073"	"8/78"	"8"	"78"	"491626.537780762"	"HCD"	"MS2"	"63.45341"	"40.8"	"100.000"	"93.5908"	"33003"	"33003"	"32984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.6"	""	"71.1"	""	"49.2"	""	"63.6"	""	"63.4"	"64.1"	""	"553"	"37"	"34.000"	"27.000"	"0.00607708254825004"	"22"	"0"	"0.0001275"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"736.95752"	"1472.90776"	"1472.90885"	"-0.74"	"-0.00054"	"8/78"	"8"	"78"	"3410676.46893311"	"HCD"	"MS2"	"1.436597"	"240.7"	"100.000"	"93.9998"	"33133"	"33133"	"33115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"473.3"	""	"368.6"	""	"252.9"	""	"429.7"	""	"348.3"	"402.1"	""	"553"	"49"	"34.000"	"27.000"	"0.000326358655757703"	""	"0"	"0.0001931"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"491.64087"	"1472.90805"	"1472.90885"	"-0.54"	"-0.00027"	"11/78"	"11"	"78"	"1959340.43200684"	"HCD"	"MS2"	"10.68839"	"61.3"	"100.000"	"93.8870"	"33087"	"33087"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.1"	""	"92.2"	""	"76.9"	""	"109.4"	"1.0"	"86.8"	"100.9"	""	"555"	"40"	"34.000"	"27.000"	"0.00297346607203436"	"27"	"9.9E-05"	"0.000575"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.6757"	"0.0000"	"1"	"1"	"1"	"491.64108"	"1472.90870"	"1472.90885"	"-0.11"	"-0.00005"	"7/78"	"7"	"78"	"2080140.46960449"	"HCD"	"MS2"	"11.27005"	"65.2"	"100.000"	"93.8239"	"33097"	"33097"	"33078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.4"	""	"96.2"	""	"74.7"	""	"108.0"	""	"93.6"	"112.4"	""	"520"	"37"	"34.000"	"27.000"	"0.00488622372368849"	"27"	"9.9E-05"	"0.000405"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"736.95801"	"1472.90874"	"1472.90885"	"-0.08"	"-0.00006"	"8/78"	"8"	"78"	"3351297.48834229"	"HCD"	"MS2"	"3.265077"	"231.1"	"100.000"	"93.9001"	"33128"	"33128"	"33110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"427.3"	""	"365.4"	""	"243.1"	""	"421.4"	""	"333.5"	"394.3"	""	"520"	"52"	"34.000"	"27.000"	"0.000172176290962458"	""	"0"	"4.647E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"736.95807"	"1472.90886"	"1472.90885"	"0.01"	"0.00001"	"8/78"	"8"	"78"	"650264.44934082"	"HCD"	"MS2"	"64.05136"	"37.4"	"100.000"	"94.2093"	"33254"	"33254"	"33232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.6"	""	"52.7"	""	"47.0"	""	"59.9"	""	"63.0"	"70.0"	""	"520"	"13"	"34.000"	"27.000"	"1.30008979094014"	"21"	"0.0001686"	"0.001564"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGLQEVEVK"	"[K].iGLQEVEVk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"736.95825"	"1472.90923"	"1472.90885"	"0.26"	"0.00019"	"8/78"	"8"	"78"	"691420.38458252"	"HCD"	"MS2"	"47.07188"	"55.8"	"100.000"	"93.7020"	"33012"	"33012"	"32993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.8"	""	"86.8"	""	"57.0"	""	"98.1"	""	"84.5"	"90.1"	""	"519"	"36"	"34.000"	"27.000"	"0.00714722348516254"	"25"	"0"	"6.202E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"491.92047"	"1473.74686"	"1473.74819"	"-0.90"	"-0.00044"	"7/66"	"7"	"66"	"1283090.98675537"	"HCD"	"MS2"	"10.34604"	"51.4"	"100.000"	"79.4371"	"27292"	"27292"	"27274"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.5"	""	"62.4"	""	"64.6"	""	"66.8"	""	"106.2"	"105.4"	""	"641"	"37"	"35.000"	"28.000"	"0.00704414089227537"	"16"	"9.9E-05"	"0.000629"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"491.92062"	"1473.74732"	"1473.74819"	"-0.59"	"-0.00029"	"7/66"	"7"	"66"	"1043051.78863525"	"HCD"	"MS2"	"23.66409"	"42.3"	"100.000"	"78.9788"	"27079"	"27079"	"27056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"61.0"	""	"67.6"	""	"51.6"	"0.7"	"75.4"	"79.3"	""	"641"	"37"	"35.000"	"28.000"	"0.00642433284770535"	"16"	"0"	"0.0002929"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"491.92075"	"1473.74768"	"1473.74819"	"-0.35"	"-0.00017"	"7/66"	"7"	"66"	"1330237.45074463"	"HCD"	"MS2"	"12.0024"	"52.6"	"100.000"	"79.1444"	"27173"	"27173"	"27150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.8"	""	"61.0"	""	"72.3"	""	"69.5"	""	"99.1"	"113.2"	""	"643"	"38"	"35.000"	"28.000"	"0.0052623651163904"	"16"	"9.9E-05"	"0.0004154"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"737.37750"	"1473.74773"	"1473.74819"	"-0.32"	"-0.00023"	"14/66"	"14"	"66"	"626771.981079102"	"HCD"	"MS2"	"33.38911"	"64.7"	"100.000"	"78.8704"	"27035"	"27035"	"27009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.3"	""	"78.4"	""	"87.1"	""	"94.8"	"1.0"	"122.8"	"119.6"	""	"647"	"47"	"35.000"	"28.000"	"0.000598238398239409"	"27"	"0"	"3.935E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"737.37756"	"1473.74785"	"1473.74819"	"-0.23"	"-0.00017"	"13/66"	"13"	"66"	"662521.72833252"	"HCD"	"MS2"	"32.49572"	"66.4"	"100.000"	"78.9946"	"27112"	"27112"	"27086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"85.4"	""	"103.9"	""	"90.1"	""	"120.8"	"123.8"	""	"647"	"39"	"35.000"	"28.000"	"0.00400750695742575"	"26"	"0"	"2.679E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"737.37769"	"1473.74809"	"1473.74819"	"-0.07"	"-0.00005"	"8/66"	"8"	"66"	"2366717.30145264"	"HCD"	"MS2"	"0"	"213.6"	"100.000"	"79.1838"	"27162"	"27162"	"27144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"337.7"	""	"269.3"	""	"328.2"	""	"259.4"	""	"381.0"	"448.0"	""	"646"	"52"	"35.000"	"28.000"	"0.000195525102545514"	"23"	"0"	"0.0001051"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"491.92096"	"1473.74833"	"1473.74819"	"0.09"	"0.00004"	"7/66"	"7"	"66"	"1438048.49371338"	"HCD"	"MS2"	"3.142066"	"56.3"	"100.000"	"79.2922"	"27206"	"27206"	"27185"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.3"	""	"73.1"	""	"84.0"	""	"75.1"	"0.4"	"103.3"	"116.5"	""	"638"	"35"	"35.000"	"28.000"	"0.0103941907619641"	"16"	"9.9E-05"	"0.0006903"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAMk.[AN]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"737.37793"	"1473.74858"	"1473.74819"	"0.26"	"0.00019"	"8/66"	"8"	"66"	"2368493.94567871"	"HCD"	"MS2"	"0"	"223.2"	"100.000"	"79.2850"	"27230"	"27230"	"27212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.2"	""	"282.2"	""	"330.2"	""	"280.0"	""	"410.4"	"456.5"	""	"639"	"52"	"35.000"	"28.000"	"0.000193406409483875"	"23"	"0"	"7.086E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"491.93451"	"1473.78897"	"1473.78991"	"-0.63"	"-0.00031"	"4/96"	"4"	"96"	"363275.385742188"	"HCD"	"MS2"	"10.72019"	"16.0"	"100.000"	"80.3012"	"27617"	"27617"	"27594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.1"	""	"21.5"	""	"21.9"	""	"25.5"	""	"31.9"	"24.4"	""	"840"	"12"	"36.000"	"29.000"	"2.56005496840871"	"24"	"0.0001991"	"0.004605"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.1333"	"0.0000"	"1"	"1"	"1"	"491.93451"	"1473.78897"	"1473.78991"	"-0.63"	"-0.00031"	"4/96"	"4"	"96"	"474867.6328125"	"HCD"	"MS2"	"7.429167"	"19.6"	"100.000"	"80.4277"	"27695"	"27695"	"27668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.7"	""	"29.2"	""	"22.7"	""	"29.1"	""	"38.7"	"33.8"	""	"840"	"15"	"36.000"	"29.000"	"1.43631365855758"	"26"	"0.0001991"	"0.003314"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"491.93454"	"1473.78907"	"1473.78991"	"-0.57"	"-0.00028"	"4/96"	"4"	"96"	"577579.768554688"	"HCD"	"MS2"	"30.86812"	"20.1"	"100.000"	"80.6468"	"27757"	"27757"	"27736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.3"	""	"26.1"	""	"26.2"	""	"31.6"	""	"38.5"	"35.2"	""	"840"	"12"	"36.000"	"29.000"	"2.7242646209026"	"16"	"0.002189"	"0.02092"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAQGEPQVQFK"	"[M].aAQGEPQVQFk.[L]"	"N-Term(Prot)(Acetyl); K11(TMT6plex)"	"1"	"1"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"P62828"	"GTP-binding nuclear protein Ran OS=Rattus norvegicus OX=10116 GN=Ran PE=1 SV=3"	"0"	"3"	"3"	"0.0714"	"0.0000"	"1"	"1"	"1"	"491.93475"	"1473.78971"	"1473.78991"	"-0.14"	"-0.00007"	"5/96"	"5"	"96"	"652145.245910645"	"HCD"	"MS2"	"30.09953"	"19.3"	"100.000"	"80.7320"	"27819"	"27819"	"27795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.8"	""	"25.1"	""	"25.4"	""	"31.2"	""	"34.5"	"36.2"	""	"840"	"14"	"36.000"	"29.000"	"1.59679546454636"	"26"	"0.0001991"	"0.003266"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHTNVESLVK"	"[R].FAHTNVESLVk.[E]"	"K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"491.94635"	"1473.82450"	"1473.82629"	"-1.22"	"-0.00060"	"8/100"	"8"	"100"	"2408007.12176514"	"HCD"	"MS2"	"34.33022"	"93.5"	"100.000"	"51.1684"	"15796"	"15796"	"15773"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.3"	""	"161.8"	""	"100.5"	""	"149.1"	""	"128.9"	"218.8"	""	"931"	"23"	"36.000"	"29.000"	"0.252883029309728"	"19"	"0.0006415"	"0.007219"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAHTNVESLVK"	"[R].FAHTNVESLVk.[E]"	"K11(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"491.94647"	"1473.82486"	"1473.82629"	"-0.97"	"-0.00048"	"7/100"	"7"	"100"	"2413997.14837646"	"HCD"	"MS2"	"30.9588"	"90.8"	"100.000"	"50.8473"	"15699"	"15699"	"15670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"124.2"	""	"160.5"	""	"87.6"	""	"138.1"	""	"137.2"	"214.9"	""	"934"	"35"	"36.000"	"29.000"	"0.0140707381329492"	"21"	"0.0001686"	"0.001174"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"491.95990"	"1473.86515"	"1473.86771"	"-1.74"	"-0.00086"	"7/90"	"7"	"90"	"3003793.78637695"	"HCD"	"MS2"	"5.081038"	"90.6"	"100.000"	"62.6853"	"20503"	"20503"	"20483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.4"	""	"94.8"	""	"119.3"	""	"144.4"	"1.0"	"159.1"	"175.9"	""	"822"	"46"	"36.000"	"29.000"	"0.00115038132236972"	"22"	"0"	"0.0002904"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"491.96024"	"1473.86615"	"1473.86771"	"-1.06"	"-0.00052"	"7/90"	"7"	"90"	"2556154.09112549"	"HCD"	"MS2"	"15.07607"	"75.3"	"100.000"	"62.7028"	"20477"	"20477"	"20456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.1"	""	"81.1"	""	"90.7"	""	"125.4"	""	"145.0"	"152.0"	""	"815"	"48"	"36.000"	"29.000"	"0.00070815383771537"	"23"	"9.9E-05"	"0.0004553"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"491.96048"	"1473.86689"	"1473.86771"	"-0.56"	"-0.00028"	"9/90"	"9"	"90"	"1938399.95526123"	"HCD"	"MS2"	"6.256824"	"59.3"	"100.000"	"62.9999"	"20598"	"20598"	"20577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.7"	""	"61.5"	""	"69.2"	""	"99.3"	""	"110.7"	"132.2"	""	"815"	"37"	"36.000"	"29.000"	"0.00758800508190119"	"21"	"0.0001991"	"0.002171"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"737.43713"	"1473.86699"	"1473.86771"	"-0.49"	"-0.00036"	"8/90"	"8"	"90"	"882265.741882324"	"HCD"	"MS2"	"0"	"72.9"	"100.000"	"62.6084"	"20439"	"20439"	"20411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.2"	""	"94.2"	""	"89.7"	""	"113.8"	""	"132.7"	"143.4"	""	"804"	"54"	"36.000"	"29.000"	"0.000161148420486176"	"28"	"0"	"3.245E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"737.43713"	"1473.86699"	"1473.86771"	"-0.49"	"-0.00036"	"8/90"	"8"	"90"	"1172711.79168701"	"HCD"	"MS2"	"0"	"95.2"	"100.000"	"62.5861"	"20463"	"20463"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.1"	""	"106.1"	""	"127.0"	""	"150.2"	""	"161.9"	"189.4"	""	"804"	"54"	"36.000"	"29.000"	"0.000153895546813363"	""	"0"	"4.469E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"737.43744"	"1473.86760"	"1473.86771"	"-0.08"	"-0.00006"	"8/90"	"8"	"90"	"2028706.89227295"	"HCD"	"MS2"	"1.672401"	"168.7"	"100.000"	"62.8764"	"20580"	"20580"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"289.5"	""	"177.6"	""	"209.0"	""	"266.2"	"1.1"	"296.4"	"358.9"	""	"792"	"52"	"35.000"	"28.000"	"0.000245298665730406"	""	"0"	"0.0001361"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"491.96072"	"1473.86762"	"1473.86771"	"-0.07"	"-0.00003"	"9/90"	"9"	"90"	"1129689.18566895"	"HCD"	"MS2"	"17.84131"	"42.6"	"100.000"	"63.0514"	"20651"	"20651"	"20636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"47.9"	""	"55.6"	""	"69.6"	""	"83.6"	"86.9"	""	"792"	"32"	"35.000"	"28.000"	"0.0244171620737147"	"17"	"0.0001991"	"0.003237"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLEALGQEK"	"[R].qLEALGQEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"737.43774"	"1473.86821"	"1473.86771"	"0.34"	"0.00025"	"8/90"	"8"	"90"	"2069481.49975586"	"HCD"	"MS2"	"1.88023"	"162.9"	"100.000"	"62.9169"	"20564"	"20564"	"20545"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"281.9"	""	"157.7"	""	"209.4"	""	"254.2"	""	"288.6"	"354.1"	""	"788"	"52"	"35.000"	"28.000"	"0.000237955759974294"	"24"	"0"	"8.603E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEDGPK"	"[K].kLEDGPk.[F]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"491.97897"	"1473.92237"	"1473.92439"	"-1.37"	"-0.00067"	"6/62"	"6"	"62"	"6283879.19726563"	"HCD"	"MS2"	"18.11468"	"402.5"	"100.000"	"36.1128"	"9724"	"9724"	"9706"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"573.4"	""	"489.3"	""	"527.4"	""	"698.9"	""	"764.8"	"764.2"	""	"525"	"6"	"34.000"	"27.000"	"6.54831115822526"	"18"	"0.006777"	"0.08384"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYMVGSYGPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"737.86322"	"1474.71916"	"1474.71978"	"-0.42"	"-0.00031"	"11/92"	"11"	"92"	"1988467.45996094"	"HCD"	"MS2"	"21.52073"	"120.1"	"100.000"	"66.0878"	"21853"	"21853"	"21833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.5"	""	"120.8"	""	"150.5"	""	"179.3"	"2.0"	"277.1"	"250.1"	""	"489"	"33"	"33.000"	"26.000"	"0.0112532732240642"	"20"	"0"	"1.549E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYMVGSYGPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"737.86340"	"1474.71953"	"1474.71978"	"-0.17"	"-0.00013"	"10/92"	"10"	"92"	"3502653.22296143"	"HCD"	"MS2"	"11.55562"	"195.7"	"100.000"	"65.7698"	"21724"	"21724"	"21707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"276.3"	""	"214.7"	""	"263.6"	""	"273.6"	""	"411.8"	"420.8"	""	"496"	"53"	"33.000"	"26.000"	"0.000132877571063309"	"24"	"0"	"3.668E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYMVGSYGPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"737.86353"	"1474.71977"	"1474.71978"	"0.00"	"0.00000"	"10/92"	"10"	"92"	"2598022.85272217"	"HCD"	"MS2"	"16.91776"	"155.9"	"100.000"	"66.0749"	"21881"	"21881"	"21862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.5"	""	"175.3"	""	"195.9"	""	"224.4"	""	"339.5"	"352.6"	""	"494"	"38"	"33.000"	"26.000"	"0.0041850143671049"	"20"	"0"	"5.029E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYMVGSYGPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"737.86377"	"1474.72026"	"1474.71978"	"0.33"	"0.00024"	"10/92"	"10"	"92"	"2990549.32098389"	"HCD"	"MS2"	"12.92253"	"165.0"	"100.000"	"65.7754"	"21759"	"21759"	"21741"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.9"	""	"204.4"	""	"218.2"	""	"211.4"	""	"334.5"	"372.0"	""	"511"	"45"	"34.000"	"27.000"	"0.000776946124060289"	"18"	"0"	"9.921E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"492.25790"	"1474.75916"	"1474.76001"	"-0.57"	"-0.00028"	"8/102"	"8"	"102"	"17518796.206604"	"HCD"	"MS2"	"5.89"	"141.9"	"71.988"	"28.4304"	"6629"	"6629"	"6619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.7"	""	"196.7"	""	"199.1"	""	"228.0"	"6.3"	"236.0"	"238.3"	""	"752"	"45"	"35.000"	"28.000"	"0.00109442963639304"	"19"	"0"	"1.455E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"737.88324"	"1474.75920"	"1474.76001"	"-0.54"	"-0.00040"	"9/102"	"9"	"102"	"527760.171691895"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"28.3639"	"6603"	"6603"	"6586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"41.3"	""	"38.3"	""	"45.5"	""	"45.7"	"42.0"	""	"752"	"57"	"35.000"	"28.000"	"7.96503786853436E-05"	"25"	"0"	"8.732E-06"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"737.88348"	"1474.75969"	"1474.76001"	"-0.21"	"-0.00016"	"9/102"	"9"	"102"	"567450.263793945"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"28.6127"	"6660"	"6660"	"6640"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.4"	""	"42.2"	""	"46.7"	""	"51.6"	""	"50.4"	"48.5"	""	"756"	"58"	"35.000"	"28.000"	"5.8410617814552E-05"	"25"	"0"	"1.483E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHGQDYLVGNR"	"[K].sHGQDYLVGNR.[L]"	"N-Term(TMT6plex)"	"1"	"3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P00502; P04904; P04903"	"Glutathione S-transferase alpha-1 OS=Rattus norvegicus OX=10116 GN=Gsta1 PE=1 SV=3; Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3; Glutathione S-transferase alpha-2 OS=Rattus norvegicus OX=10116 GN=Gsta2 PE=1 SV=2"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"492.25818"	"1474.75998"	"1474.76001"	"-0.02"	"-0.00001"	"8/102"	"8"	"102"	"17217667.1239624"	"HCD"	"MS2"	"4.613348"	"174.2"	"100.000"	"28.6517"	"6675"	"6675"	"6663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"287.2"	""	"227.1"	""	"247.1"	""	"280.4"	"4.2"	"299.8"	"302.6"	""	"762"	"53"	"35.000"	"28.000"	"0.000170578768891194"	"19"	"0"	"1.274E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIENATHDGLK"	"[K].FIEnATHDGLk.[S]"	"N4(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q99NB7"	"Acyl-coenzyme A thioesterase 12 OS=Rattus norvegicus OX=10116 GN=Acot12 PE=1 SV=1"	"Q99NB7"	"Acyl-coenzyme A thioesterase 12 OS=Rattus norvegicus OX=10116 GN=Acot12 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"737.89014"	"1474.77300"	"1474.77392"	"-0.63"	"-0.00046"	"4/104"	"4"	"104"	"139368.723144531"	"HCD"	"MS2"	"5.089379"	"8.9"	"100.000"	"113.8592"	"41082"	"41082"	"41055"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"6.2"	""	"3.6"	""	"6.6"	"0.6"	"9.7"	"51.0"	""	"798"	"20"	"36.000"	"29.000"	"0.440527369340927"	"23"	"0.009005"	"0.1164"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"4"	"4"	"0.9231"	"0.0000"	"1"	"1"	"1"	"369.44986"	"1474.77761"	"1474.77863"	"-0.69"	"-0.00026"	"10/94"	"10"	"94"	"7298526.37017822"	"HCD"	"MS2"	"18.84768"	"203.5"	"100.000"	"20.5489"	"3530"	"3530"	"3511"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.7"	""	"266.5"	""	"264.6"	""	"337.7"	""	"402.6"	"373.6"	""	"839"	"39"	"36.000"	"29.000"	"0.0053423454248649"	"18"	"9.9E-05"	"0.0005943"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"4"	"4"	"0.8222"	"0.0000"	"1"	"1"	"1"	"369.44992"	"1474.77785"	"1474.77863"	"-0.53"	"-0.00020"	"11/94"	"11"	"94"	"8274568.81860352"	"HCD"	"MS2"	"18.46544"	"198.8"	"100.000"	"20.5152"	"3479"	"3479"	"3466"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"290.9"	""	"265.6"	""	"286.2"	""	"299.6"	""	"401.7"	"341.8"	""	"836"	"45"	"36.000"	"29.000"	"0.00118352185424414"	"23"	"0"	"0.0001093"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHMQPTHPIR"	"[K].eHMQPTHPIR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P68511; P61983"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.89282"	"1474.77837"	"1474.77863"	"-0.18"	"-0.00013"	"8/94"	"8"	"94"	"173538.212890625"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"20.5243"	"3483"	"3483"	"3466"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"12.2"	""	"15.4"	""	"9.1"	""	"14.4"	"15.5"	""	"834"	"25"	"36.000"	"29.000"	"0.123349119855199"	"14"	"0.0001991"	"0.003115"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSADEVLAAVSR"	"[K].qSADEVLAAVSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"737.90491"	"1474.80254"	"1474.80629"	"-2.54"	"-0.00187"	"10/128"	"10"	"128"	"968386.721252441"	"HCD"	"MS2"	"49.0643"	"61.0"	"100.000"	"85.7614"	"29851"	"29851"	"29834"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"62.0"	""	"49.1"	""	"129.9"	"1.6"	"121.5"	"147.2"	""	"1003"	"34"	"37.000"	"30.000"	"0.0206666905827311"	"30"	"0"	"5.769E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSADEVLAAVSR"	"[K].qSADEVLAAVSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"P97687"	"Ectonucleoside triphosphate diphosphohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Entpd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"737.90521"	"1474.80315"	"1474.80629"	"-2.13"	"-0.00157"	"10/128"	"10"	"128"	"821830.336975098"	"HCD"	"MS2"	"42.4496"	"52.3"	"100.000"	"85.7964"	"29836"	"29836"	"29822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.1"	""	"46.9"	""	"54.1"	""	"103.6"	"1.5"	"114.6"	"127.0"	""	"1006"	"34"	"37.000"	"30.000"	"0.0183471235303581"	"29"	"0"	"3.313E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"737.91040"	"1474.81352"	"1474.81534"	"-1.23"	"-0.00091"	"15/86"	"15"	"86"	"1661398.23461914"	"HCD"	"MS2"	"0"	"96.3"	"100.000"	"33.8389"	"8767"	"8767"	"8739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.1"	""	"108.2"	""	"110.6"	""	"185.5"	"0.4"	"200.8"	"181.6"	""	"997"	"57"	"36.000"	"29.000"	"0.000103434438845127"	"22"	"0"	"2.317E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"737.91058"	"1474.81389"	"1474.81534"	"-0.99"	"-0.00073"	"15/86"	"15"	"86"	"1568092.86602783"	"HCD"	"MS2"	"0"	"92.7"	"100.000"	"33.7214"	"8757"	"8757"	"8729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.5"	""	"113.6"	""	"105.1"	""	"173.7"	"3.0"	"182.7"	"187.2"	""	"996"	"55"	"36.000"	"29.000"	"0.000160040294824288"	"21"	"0"	"1.798E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"737.91058"	"1474.81389"	"1474.81534"	"-0.99"	"-0.00073"	"8/86"	"8"	"86"	"2592454.57995605"	"HCD"	"MS2"	"0"	"143.3"	"100.000"	"34.1555"	"8895"	"8895"	"8876"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.2"	""	"158.9"	""	"183.3"	""	"250.0"	"0.7"	"291.3"	"309.2"	""	"996"	"56"	"36.000"	"29.000"	"0.00011540625356843"	"26"	"0"	"4.769E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"737.91077"	"1474.81426"	"1474.81534"	"-0.74"	"-0.00054"	"11/86"	"11"	"86"	"284309.419494629"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"34.4859"	"9029"	"9029"	"9007"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"21.5"	""	"22.6"	""	"35.2"	""	"40.7"	"38.9"	""	"1000"	"38"	"36.000"	"30.000"	"0.00714446979255551"	"24"	"0"	"0.0003864"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"492.27637"	"1474.81455"	"1474.81534"	"-0.54"	"-0.00027"	"11/86"	"11"	"86"	"6683573.03955078"	"HCD"	"MS2"	"10.93092"	"188.1"	"100.000"	"33.9101"	"8796"	"8796"	"8771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.4"	""	"237.9"	""	"219.4"	""	"351.7"	""	"371.7"	"352.5"	""	"1003"	"20"	"37.000"	"30.000"	"0.494619162044052"	"15"	"0.0005161"	"0.00662"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"492.27649"	"1474.81491"	"1474.81534"	"-0.29"	"-0.00014"	"9/86"	"9"	"86"	"7679538.91802979"	"HCD"	"MS2"	"13.29951"	"222.3"	"100.000"	"33.8477"	"8808"	"8808"	"8793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"296.7"	""	"250.5"	""	"249.4"	""	"427.8"	"0.0"	"456.5"	"429.2"	""	"979"	"24"	"36.000"	"29.000"	"0.176097299558736"	"16"	"0.0001991"	"0.003361"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"737.91132"	"1474.81536"	"1474.81534"	"0.01"	"0.00001"	"7/86"	"7"	"86"	"553723.909851074"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"34.2929"	"8987"	"8987"	"8970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"35.5"	""	"38.9"	""	"52.7"	""	"73.8"	"79.2"	""	"979"	"47"	"36.000"	"29.000"	"0.000963280338811499"	"21"	"0"	"0.0002769"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDTSTPPSPK"	"[K].sDTSTPPSPk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"737.91138"	"1474.81548"	"1474.81534"	"0.09"	"0.00007"	"15/86"	"15"	"86"	"3240790.28564453"	"HCD"	"MS2"	"0"	"182.6"	"100.000"	"34.0014"	"8869"	"8869"	"8853"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"217.4"	""	"201.2"	""	"216.4"	""	"339.7"	"0.8"	"380.5"	"378.4"	""	"964"	"55"	"36.000"	"29.000"	"0.000155255515739862"	""	"0"	"1.426E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.27707"	"1474.81665"	"1474.81937"	"-1.84"	"-0.00090"	"5/68"	"5"	"68"	"680681.850463867"	"HCD"	"MS2"	"41.18557"	"19.9"	"100.000"	"91.1297"	"31975"	"31975"	"31951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.5"	""	"32.4"	""	"29.2"	""	"27.9"	""	"35.8"	"36.0"	""	"974"	"8"	"36.000"	"29.000"	"7.32030137485841"	"13"	"0.006343"	"0.07874"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"737.91272"	"1474.81816"	"1474.81937"	"-0.82"	"-0.00060"	"7/68"	"7"	"68"	"304990.00994873"	"HCD"	"MS2"	"11.25213"	"31.5"	"100.000"	"91.6516"	"32187"	"32187"	"32164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.0"	""	"41.8"	""	"42.8"	""	"53.2"	"1.9"	"52.4"	"55.3"	""	"975"	"43"	"36.000"	"29.000"	"0.00224892317598185"	""	"0.0001686"	"0.001052"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"492.27789"	"1474.81913"	"1474.81937"	"-0.16"	"-0.00008"	"4/68"	"4"	"68"	"588994.774597168"	"HCD"	"MS2"	"16.16991"	"16.8"	"100.000"	"91.4593"	"32145"	"32145"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"22.3"	""	"24.7"	""	"26.7"	""	"34.0"	"31.1"	""	"968"	"17"	"36.000"	"29.000"	"0.983660793293131"	"16"	"0.003208"	"0.03477"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"492.27789"	"1474.81913"	"1474.81937"	"-0.16"	"-0.00008"	"9/68"	"9"	"68"	"1006330.39239502"	"HCD"	"MS2"	"23.23976"	"29.5"	"100.000"	"91.4299"	"32097"	"32097"	"32074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"35.5"	""	"41.7"	""	"48.4"	""	"48.3"	"59.6"	""	"968"	"20"	"36.000"	"29.000"	"0.512678802985808"	"17"	"0.002508"	"0.02335"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"737.91327"	"1474.81926"	"1474.81937"	"-0.07"	"-0.00005"	"14/68"	"14"	"68"	"2315898.29327393"	"HCD"	"MS2"	"0"	"207.8"	"100.000"	"91.3355"	"32059"	"32059"	"32042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"355.1"	""	"301.9"	""	"312.9"	""	"286.1"	"0.6"	"349.3"	"359.3"	""	"968"	"46"	"36.000"	"29.000"	"0.00129373510179304"	""	"9.9E-05"	"0.0009946"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"737.91345"	"1474.81963"	"1474.81937"	"0.18"	"0.00013"	"7/68"	"7"	"68"	"425380.354919434"	"HCD"	"MS2"	"9.41736"	"41.8"	"100.000"	"91.0236"	"31932"	"31932"	"31912"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.1"	""	"59.1"	""	"60.3"	""	"73.0"	""	"65.9"	"69.3"	""	"959"	"43"	"36.000"	"29.000"	"0.0021616660982763"	"26"	"9.9E-05"	"0.0005204"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6136"	"0.0000"	"1"	"1"	"1"	"737.91345"	"1474.81963"	"1474.81937"	"0.18"	"0.00013"	"7/68"	"7"	"68"	"533453.041503906"	"HCD"	"MS2"	"7.750651"	"53.1"	"100.000"	"90.9650"	"31946"	"31946"	"31928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.6"	""	"65.7"	""	"76.6"	""	"93.8"	"1.2"	"93.7"	"84.9"	""	"959"	"44"	"36.000"	"29.000"	"0.00205489015530572"	""	"9.9E-05"	"0.0005413"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"737.91357"	"1474.81987"	"1474.81937"	"0.34"	"0.00025"	"14/68"	"14"	"68"	"2314040.54705811"	"HCD"	"MS2"	"2.124747"	"200.6"	"100.000"	"91.2468"	"32059"	"32059"	"32046"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"321.8"	""	"276.0"	"2.4"	"287.6"	""	"299.7"	""	"343.4"	"372.8"	""	"960"	"46"	"36.000"	"29.000"	"0.00126835620351453"	""	"9.9E-05"	"0.0008417"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"2"	"2"	"0.6061"	"0.0000"	"1"	"1"	"1"	"737.91364"	"1474.81999"	"1474.81937"	"0.42"	"0.00031"	"7/68"	"7"	"68"	"312382.202026367"	"HCD"	"MS2"	"5.568089"	"28.9"	"100.000"	"91.5655"	"32188"	"32188"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.8"	""	"39.7"	""	"41.1"	""	"45.5"	""	"52.8"	"53.5"	""	"958"	"33"	"36.000"	"29.000"	"0.022559813934414"	"28"	"9.9E-05"	"0.0009683"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLFYTTK"	"[R].eDLFYTTk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"D3ZF77"	"Aldo-keto reductase family 1 member C15 OS=Rattus norvegicus OX=10116 GN=Akr1c15 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"492.27820"	"1474.82004"	"1474.81937"	"0.46"	"0.00022"	"9/68"	"9"	"68"	"1154309.88934326"	"HCD"	"MS2"	"28.95562"	"32.8"	"100.000"	"91.1358"	"32015"	"32015"	"31993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.0"	""	"47.6"	""	"46.6"	""	"45.4"	""	"56.6"	"60.9"	""	"958"	"33"	"36.000"	"29.000"	"0.025605632815115"	"24"	"0.001103"	"0.009126"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLLELDISK"	"[K].TTLLLELDISk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"492.30023"	"1474.88614"	"1474.89298"	"-4.63"	"-0.00228"	"4/98"	"4"	"98"	"1629760.41705322"	"HCD"	"MS2"	"24.32104"	"49.5"	"100.000"	"85.1306"	"29567"	"29567"	"29543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"62.8"	""	"70.8"	""	"84.7"	""	"84.9"	"104.5"	""	"814"	"20"	"36.000"	"29.000"	"0.387788038757626"	"24"	"0.002373"	"0.02237"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVnAAIATIKTK.[R]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"3"	"3"	"0.1053"	"0.0000"	"1"	"1"	"1"	"492.30029"	"1474.88633"	"1474.86783"	"12.54"	"0.00617"	"11/126"	"11"	"126"	"732323.318481445"	"HCD"	"MS2"	"31.81742"	"30.1"	"100.000"	"87.3530"	"30491"	"30491"	"30468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"36.6"	""	"39.0"	""	"49.7"	"0.1"	"68.4"	"56.0"	""	"814"	"38"	"36.000"	"29.000"	"0.00595106110003884"	""	"0.001488"	"0.01248"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSEVAELK"	"[R].lQSEVAELk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"737.94702"	"1474.88677"	"1474.88812"	"-0.91"	"-0.00067"	"6/86"	"6"	"86"	"445933.035766602"	"HCD"	"MS2"	"45.02687"	"39.6"	"100.000"	"89.8618"	"31463"	"31463"	"31446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"62.4"	""	"56.6"	""	"54.3"	"1.2"	"63.5"	"76.4"	""	"814"	"21"	"36.000"	"29.000"	"0.352853483433594"	"23"	"0.0001991"	"0.002223"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVnAAIATIKTK.[R]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"737.94720"	"1474.88713"	"1474.86783"	"13.09"	"0.00965"	"8/126"	"8"	"126"	"963424.844482422"	"HCD"	"MS2"	"79.65496"	"50.2"	"100.000"	"87.2153"	"30401"	"30401"	"30391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"73.5"	""	"56.1"	""	"75.0"	""	"101.4"	"103.9"	""	"812"	"25"	"36.000"	"29.000"	"0.128388473002836"	""	"0.004234"	"0.04928"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLLELDISK"	"[K].TTLLLELDISk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"492.30057"	"1474.88715"	"1474.89298"	"-3.95"	"-0.00194"	"4/98"	"4"	"98"	"2955097.62701416"	"HCD"	"MS2"	"13.05765"	"87.0"	"100.000"	"85.4371"	"29691"	"29691"	"29676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.6"	""	"99.4"	""	"123.9"	""	"149.8"	"1.7"	"154.2"	"181.7"	""	"812"	"20"	"36.000"	"29.000"	"0.380650174811907"	"24"	"0.004819"	"0.05778"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLLELDISK"	"[K].TTLLLELDISk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"492.30063"	"1474.88733"	"1474.89298"	"-3.83"	"-0.00188"	"4/98"	"4"	"98"	"3191726.51806641"	"HCD"	"MS2"	"9.732524"	"91.7"	"100.000"	"85.4225"	"29715"	"29715"	"29699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.9"	"2.2"	"96.9"	""	"125.0"	""	"166.6"	""	"164.4"	"198.8"	""	"813"	"17"	"36.000"	"29.000"	"0.816696228325447"	"22"	"0.005871"	"0.0726"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLLELDISK"	"[K].TTLLLELDISk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"492.30075"	"1474.88770"	"1474.89298"	"-3.58"	"-0.00176"	"4/98"	"4"	"98"	"1577402.33380127"	"HCD"	"MS2"	"30.29972"	"47.5"	"100.000"	"85.1415"	"29601"	"29601"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.1"	""	"50.6"	""	"73.4"	""	"84.1"	""	"75.7"	"104.0"	""	"782"	"17"	"35.000"	"28.000"	"0.818797970237699"	"22"	"0.001615"	"0.01364"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLLELDISK"	"[K].TTLLLELDISk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"3"	"737.94769"	"1474.88811"	"1474.89298"	"-3.30"	"-0.00243"	"7/98"	"7"	"98"	"620754.221374512"	"HCD"	"MS2"	"16.50296"	"53.3"	"100.000"	"85.0109"	"29518"	"29518"	"29497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.3"	""	"63.3"	""	"75.2"	""	"88.5"	"2.4"	"86.4"	"115.7"	""	"782"	"17"	"35.000"	"28.000"	"0.748474066683244"	""	"0.0001991"	"0.003114"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVNAAIATIKTK"	"[K].dVnAAIATIKTK.[R]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"4"	"P68370"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6P9V9"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1"	"1"	"3"	"3"	"0.1389"	"0.0000"	"1"	"1"	"1"	"492.30096"	"1474.88834"	"1474.86783"	"13.91"	"0.00684"	"10/126"	"10"	"126"	"644007.716125488"	"HCD"	"MS2"	"38.23432"	"26.2"	"100.000"	"87.4391"	"30491"	"30491"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.7"	""	"29.3"	""	"36.8"	""	"41.2"	""	"52.8"	"58.0"	""	"781"	"36"	"35.000"	"28.000"	"0.00898713029698023"	""	"0.004959"	"0.06129"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSEVAELK"	"[R].lQSEVAELk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"Q568Z6"	"IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1"	"0"	"2"	"2"	"0.4219"	"0.0000"	"1"	"1"	"1"	"737.94794"	"1474.88860"	"1474.88812"	"0.33"	"0.00024"	"8/86"	"8"	"86"	"899466.715332031"	"HCD"	"MS2"	"37.66235"	"72.1"	"100.000"	"89.8602"	"31503"	"31503"	"31483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.9"	""	"101.9"	""	"93.3"	""	"118.4"	""	"121.7"	"144.2"	""	"804"	"64"	"36.000"	"29.000"	"1.72276505199771E-05"	""	"0"	"4.538E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTLLLELDISK"	"[K].TTLLLELDISk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"Q498R1"	"Methionine synthase reductase OS=Rattus norvegicus OX=10116 GN=Mtrr PE=2 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"3"	"737.94812"	"1474.88896"	"1474.89298"	"-2.72"	"-0.00201"	"10/98"	"10"	"98"	"831382.178649902"	"HCD"	"MS2"	"4.799459"	"64.6"	"100.000"	"85.0561"	"29566"	"29566"	"29545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.6"	""	"78.6"	""	"99.5"	""	"112.1"	"1.4"	"104.1"	"132.8"	""	"804"	"16"	"36.000"	"29.000"	"1.02382576153919"	"23"	"0.004998"	"0.06343"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDIVNGLR"	"[K].tkDIVnGLR.[S]"	"N-Term(TMT6plex); K2(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.30438"	"1474.89859"	"1474.89935"	"-0.51"	"-0.00025"	"7/82"	"7"	"82"	"2321658.60015869"	"HCD"	"MS2"	"28.95384"	"127.2"	"100.000"	"47.8509"	"14483"	"14483"	"14458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.3"	""	"165.4"	""	"175.9"	""	"207.9"	"0.1"	"216.4"	"209.6"	""	"717"	"10"	"35.000"	"28.000"	"3.93087433317332"	"13"	"0.002189"	"0.02115"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKDIVNGLR"	"[K].tkDIVnGLR.[S]"	"N-Term(TMT6plex); K2(TMT6plex); N6(Deamidated)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.30447"	"1474.89887"	"1474.89935"	"-0.33"	"-0.00016"	"7/82"	"7"	"82"	"2488712.30523682"	"HCD"	"MS2"	"25.78326"	"141.5"	"100.000"	"48.1965"	"14586"	"14586"	"14557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"255.6"	""	"181.9"	""	"197.6"	""	"224.6"	"0.1"	"237.1"	"241.1"	""	"689"	"9"	"35.000"	"28.000"	"4.73357460391812"	"13"	"0.002189"	"0.02147"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"492.59705"	"1475.77658"	"1475.77823"	"-1.12"	"-0.00055"	"8/78"	"8"	"78"	"3432362.44989014"	"HCD"	"MS2"	"9.671011"	"130.4"	"100.000"	"60.4398"	"19560"	"19560"	"19540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.3"	""	"129.6"	""	"157.9"	""	"237.9"	""	"290.1"	"266.0"	""	"871"	"30"	"36.000"	"29.000"	"0.0416858018048905"	"20"	"0.001615"	"0.01407"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"492.59711"	"1475.77677"	"1475.77823"	"-0.99"	"-0.00049"	"8/78"	"8"	"78"	"3258413.81359863"	"HCD"	"MS2"	"3.098588"	"118.5"	"100.000"	"60.4691"	"19605"	"19605"	"19586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.5"	""	"112.9"	""	"138.2"	""	"211.3"	"0.8"	"258.9"	"259.6"	""	"873"	"30"	"36.000"	"29.000"	"0.0413032520936169"	"20"	"0.001453"	"0.01159"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"738.39209"	"1475.77690"	"1475.77823"	"-0.90"	"-0.00066"	"7/78"	"7"	"78"	"1552585.88067627"	"HCD"	"MS2"	"43.879"	"143.9"	"100.000"	"60.1242"	"19465"	"19465"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"201.3"	""	"147.5"	""	"151.9"	""	"266.6"	""	"301.6"	"298.6"	""	"875"	"37"	"36.000"	"29.000"	"0.00889156192284596"	"21"	"0.0001686"	"0.001179"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"492.59729"	"1475.77732"	"1475.77823"	"-0.62"	"-0.00030"	"8/78"	"8"	"78"	"1445845.29937744"	"HCD"	"MS2"	"43.72953"	"60.2"	"100.000"	"60.1768"	"19487"	"19487"	"19461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.5"	""	"62.2"	""	"77.2"	""	"114.7"	"1.3"	"121.7"	"117.5"	""	"870"	"26"	"36.000"	"29.000"	"0.107272711169694"	"18"	"0.001488"	"0.01262"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"738.39252"	"1475.77776"	"1475.77823"	"-0.32"	"-0.00024"	"7/78"	"7"	"78"	"1868012.47686768"	"HCD"	"MS2"	"0"	"175.8"	"100.000"	"60.6762"	"19689"	"19689"	"19673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.3"	""	"165.0"	""	"182.4"	""	"311.7"	""	"399.5"	"408.1"	""	"872"	"40"	"36.000"	"29.000"	"0.00452362389296653"	"23"	"0.0001686"	"0.001336"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"738.39264"	"1475.77800"	"1475.77823"	"-0.16"	"-0.00011"	"7/78"	"7"	"78"	"1845267.62664795"	"HCD"	"MS2"	"36.46518"	"171.0"	"100.000"	"60.2553"	"19485"	"19485"	"19464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.4"	""	"183.6"	""	"179.4"	""	"321.9"	"2.7"	"360.0"	"331.1"	""	"872"	"37"	"36.000"	"29.000"	"0.00842338186219379"	"23"	"9.9E-05"	"0.0008932"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"738.39276"	"1475.77825"	"1475.77823"	"0.01"	"0.00001"	"7/78"	"7"	"78"	"6495785.42132568"	"HCD"	"MS2"	"0"	"539.3"	"100.000"	"60.3934"	"19575"	"19575"	"19564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"659.0"	""	"520.9"	""	"567.3"	""	"982.0"	""	"1205.7"	"1196.2"	""	"882"	"40"	"36.000"	"29.000"	"0.00453355187473774"	"22"	"0.0001991"	"0.002178"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"738.39307"	"1475.77886"	"1475.77823"	"0.42"	"0.00031"	"7/78"	"7"	"78"	"6822526.3817749"	"HCD"	"MS2"	"0"	"563.0"	"100.000"	"60.5432"	"19603"	"19603"	"19588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"705.8"	""	"507.8"	""	"592.2"	""	"1040.4"	"3.0"	"1257.8"	"1246.5"	""	"867"	"40"	"36.000"	"29.000"	"0.00441559366721459"	"23"	"0.0001991"	"0.004405"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"738.39337"	"1475.77947"	"1475.77823"	"0.84"	"0.00062"	"7/78"	"7"	"78"	"863358.720275879"	"HCD"	"MS2"	"0"	"84.8"	"100.000"	"60.8491"	"19727"	"19727"	"19710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.8"	""	"80.5"	""	"91.5"	""	"153.4"	"0.4"	"186.6"	"183.8"	""	"888"	"42"	"36.000"	"29.000"	"0.00314327928266557"	"22"	"9.9E-05"	"0.000781"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQDINATK"	"[R].lDQDINATk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"738.42920"	"1475.85112"	"1475.84698"	"2.81"	"0.00207"	"12/88"	"12"	"88"	"640677.742553711"	"HCD"	"MS2"	"0"	"58.8"	"100.000"	"61.8883"	"20146"	"20146"	"20127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.2"	""	"73.8"	""	"70.5"	""	"104.1"	"0.5"	"109.7"	"113.3"	""	"1017"	"34"	"37.000"	"30.000"	"0.0180838525492329"	"19"	"0"	"0.0001845"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQDINATK"	"[R].lDQDINATk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"P97531"	"Cdc42-interacting protein 4 OS=Rattus norvegicus OX=10116 GN=Trip10 PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"738.43024"	"1475.85320"	"1475.84698"	"4.21"	"0.00311"	"7/88"	"7"	"88"	"379622.100341797"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"61.7265"	"20114"	"20114"	"20086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"55.4"	""	"49.3"	""	"65.2"	""	"66.8"	"73.3"	""	"1007"	"29"	"37.000"	"30.000"	"0.0706316700246945"	"17"	"0.003704"	"0.04025"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKIETELR"	"[R].ekIETELR.[D]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"492.63214"	"1475.88187"	"1475.88336"	"-1.01"	"-0.00050"	"5/78"	"5"	"78"	"6331583.17675781"	"HCD"	"MS2"	"9.45916"	"308.9"	"100.000"	"43.1665"	"12580"	"12580"	"12555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"660.3"	""	"229.0"	""	"285.1"	""	"658.4"	""	"582.3"	"512.5"	""	"819"	"3"	"36.000"	"29.000"	"19.5548237562824"	"15"	"0.009444"	"0.1256"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDVYDK"	"[K].nYTDVYDk.[N]"	"N-Term(TMT6plex); N1(Deamidated); K8(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"738.88477"	"1476.76225"	"1476.76225"	"0.01"	"0.00000"	"6/78"	"6"	"78"	"203670.843261719"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"70.5527"	"23663"	"23663"	"23638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.6"	""	"15.2"	""	"16.1"	""	"37.7"	""	"40.0"	"48.5"	""	"829"	"25"	"36.000"	"29.000"	"0.118720176852628"	"17"	"0.005266"	"0.06734"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEVGGSPANTR"	"[K].lFEVGGSPANTR.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"738.90228"	"1476.79729"	"1476.80081"	"-2.38"	"-0.00176"	"9/108"	"9"	"108"	"690770.69519043"	"HCD"	"MS2"	"36.04797"	"36.2"	"100.000"	"75.3085"	"25592"	"25592"	"25569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"52.4"	""	"57.2"	""	"50.6"	"0.2"	"72.1"	"71.2"	""	"1054"	"42"	"37.000"	"30.000"	"0.00366277815369296"	""	"0"	"8.548E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFEVGGSPANTR"	"[K].lFEVGGSPANTR.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.4146"	"0.0000"	"1"	"1"	"1"	"738.90283"	"1476.79839"	"1476.80081"	"-1.64"	"-0.00121"	"8/108"	"8"	"108"	"644985.087036133"	"HCD"	"MS2"	"29.81868"	"36.5"	"100.000"	"75.5013"	"25701"	"25701"	"25681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.3"	""	"49.3"	""	"50.1"	""	"59.6"	"0.2"	"61.7"	"67.5"	""	"1050"	"41"	"37.000"	"30.000"	"0.00392788987768356"	""	"0"	"5.552E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQMEALNGK"	"[R].qQMEALNGk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"P35248"	"Pulmonary surfactant-associated protein D OS=Rattus norvegicus OX=10116 GN=Sftpd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"738.91492"	"1476.82256"	"1476.82447"	"-1.29"	"-0.00096"	"4/80"	"4"	"80"	"292094.051086426"	"HCD"	"MS2"	"39.56983"	"22.6"	"100.000"	"48.5070"	"14749"	"14749"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"31.6"	""	"29.0"	""	"29.9"	"0.7"	"46.0"	"42.9"	""	"1106"	"4"	"37.000"	"30.000"	"20.1708932649861"	"13"	"0.00307"	"0.03306"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"STPTENELK"	"[R].sTPTENELk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"738.91870"	"1476.83013"	"1476.83099"	"-0.59"	"-0.00043"	"6/82"	"6"	"82"	"415757.593322754"	"HCD"	"MS2"	"100"	"39.1"	"100.000"	"42.7110"	"12394"	"12394"	"12367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.2"	""	"45.0"	""	"52.2"	""	"63.9"	""	"79.6"	"76.9"	""	"1055"	"11"	"37.000"	"30.000"	"4.53129632594096"	"20"	"0.009444"	"0.1256"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STPTENELK"	"[R].sTPTENELk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"B2RYU6"	"Trafficking protein particle complex subunit 2-like protein OS=Rattus norvegicus OX=10116 GN=Trappc2l PE=2 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"738.91925"	"1476.83122"	"1476.83099"	"0.16"	"0.00011"	"7/82"	"7"	"82"	"629684.643005371"	"HCD"	"MS2"	"30.13259"	"51.8"	"100.000"	"42.9065"	"12440"	"12440"	"12409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.4"	""	"59.1"	""	"68.8"	""	"92.0"	"0.9"	"98.0"	"100.3"	""	"1032"	"35"	"37.000"	"30.000"	"0.0175246640656651"	"18"	"0.0001991"	"0.003658"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95020"	"1476.83603"	"1476.83719"	"-0.79"	"-0.00039"	"8/90"	"8"	"90"	"3963915.96618652"	"HCD"	"MS2"	"22.66819"	"65.2"	"100.000"	"46.1324"	"13754"	"13754"	"13729"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.8"	""	"82.0"	""	"82.6"	""	"116.2"	"4.5"	"134.5"	"116.0"	""	"971"	"33"	"36.000"	"29.000"	"0.0271762315525876"	"15"	"0"	"0.0002753"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95020"	"1476.83603"	"1476.83719"	"-0.79"	"-0.00039"	"8/90"	"8"	"90"	"4619856.18670654"	"HCD"	"MS2"	"23.6362"	"75.6"	"100.000"	"45.8287"	"13630"	"13630"	"13605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.4"	""	"89.1"	""	"90.8"	""	"131.3"	"1.2"	"152.8"	"148.1"	""	"971"	"48"	"36.000"	"29.000"	"0.000769465644939871"	"16"	"0"	"2.918E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95029"	"1476.83631"	"1476.83719"	"-0.60"	"-0.00030"	"8/90"	"8"	"90"	"4221777.00030518"	"HCD"	"MS2"	"20.34535"	"76.8"	"100.000"	"45.4732"	"13519"	"13519"	"13496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.4"	""	"94.7"	""	"89.0"	""	"124.2"	"1.5"	"159.3"	"152.5"	""	"983"	"43"	"36.000"	"29.000"	"0.00220051089002682"	"15"	"0"	"1.43E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVEPEVAIHR"	"[K].tPVEPEVAIHR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"P60868"	"40S ribosomal protein S20 OS=Rattus norvegicus OX=10116 GN=Rps20 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.95038"	"1476.83658"	"1476.83719"	"-0.41"	"-0.00020"	"9/90"	"9"	"90"	"4266042.22509766"	"HCD"	"MS2"	"25.33454"	"66.2"	"100.000"	"45.7725"	"13641"	"13641"	"13621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.0"	""	"90.3"	""	"87.8"	""	"102.9"	"1.3"	"132.2"	"122.9"	""	"977"	"42"	"36.000"	"29.000"	"0.0028045589178828"	"15"	"0"	"1.951E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVSSDELAK"	"[R].gLVSSDELAk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"492.96024"	"1476.86615"	"1476.86738"	"-0.83"	"-0.00041"	"7/78"	"7"	"78"	"2032750.53649902"	"HCD"	"MS2"	"11.59784"	"74.0"	"100.000"	"73.1171"	"24702"	"24702"	"24682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.7"	""	"93.1"	""	"99.5"	""	"101.0"	""	"142.5"	"174.9"	""	"907"	"32"	"36.000"	"29.000"	"0.0265202303159522"	"27"	"9.9E-05"	"0.000796"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVSSDELAK"	"[R].gLVSSDELAk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"738.93695"	"1476.86662"	"1476.86738"	"-0.51"	"-0.00038"	"16/78"	"16"	"78"	"3183660.30169678"	"HCD"	"MS2"	"0"	"239.3"	"100.000"	"73.0305"	"24697"	"24697"	"24680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"320.2"	""	"325.9"	""	"304.3"	""	"312.0"	""	"444.0"	"568.8"	""	"910"	"62"	"36.000"	"29.000"	"2.76701425581817E-05"	""	"0"	"1.624E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVSSDELAK"	"[R].gLVSSDELAk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"738.93701"	"1476.86675"	"1476.86738"	"-0.43"	"-0.00032"	"9/78"	"9"	"78"	"3758827.65655518"	"HCD"	"MS2"	"0"	"281.6"	"100.000"	"72.9553"	"24636"	"24636"	"24618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"350.4"	""	"387.1"	""	"361.7"	""	"385.9"	""	"522.5"	"668.0"	""	"868"	"68"	"36.000"	"29.000"	"6.44896068752561E-06"	""	"0"	"7.077E-06"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVSSDELAK"	"[R].gLVSSDELAk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"738.93707"	"1476.86687"	"1476.86738"	"-0.35"	"-0.00026"	"9/78"	"9"	"78"	"2015903.4821167"	"HCD"	"MS2"	"4.423313"	"169.3"	"100.000"	"73.2712"	"24765"	"24765"	"24746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"207.1"	""	"217.5"	""	"222.2"	""	"226.6"	""	"322.5"	"418.1"	""	"868"	"65"	"36.000"	"29.000"	"1.24305323893945E-05"	""	"0"	"4.485E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVSSDELAK"	"[R].gLVSSDELAk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"738.93707"	"1476.86687"	"1476.86738"	"-0.35"	"-0.00026"	"8/78"	"8"	"78"	"2704104.8762207"	"HCD"	"MS2"	"4.194647"	"221.2"	"100.000"	"73.3324"	"24820"	"24820"	"24803"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.0"	""	"275.3"	""	"273.1"	""	"281.4"	""	"431.1"	"578.8"	""	"868"	"54"	"36.000"	"29.000"	"0.000161246289428173"	"27"	"0"	"9.563E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVVKEETR"	"[K].gTVVkEETR.[R]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"492.96378"	"1476.87677"	"1476.87861"	"-1.25"	"-0.00061"	"5/84"	"5"	"84"	"12776672.4468384"	"HCD"	"MS2"	"17.93244"	"759.9"	"100.000"	"27.1995"	"6096"	"6096"	"6084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1645.1"	""	"1519.5"	""	"1379.4"	""	"842.5"	"2.3"	"850.9"	"906.2"	""	"754"	"3"	"35.000"	"28.000"	"19.9223859919243"	"13"	"0.005832"	"0.07175"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"739.37036"	"1477.73345"	"1477.73405"	"-0.41"	"-0.00030"	"8/110"	"8"	"110"	"377671.338623047"	"HCD"	"MS2"	"12.71161"	"28.5"	"100.000"	"89.7599"	"31422"	"31422"	"31407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"41.7"	""	"41.9"	""	"36.0"	""	"51.0"	"61.3"	""	"618"	"49"	"34.000"	"27.000"	"0.000374937154793678"	"20"	"0"	"2.052E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.37067"	"1477.73406"	"1477.73405"	"0.00"	"0.00000"	"15/110"	"15"	"110"	"629993.959960938"	"HCD"	"MS2"	"44.43758"	"42.8"	"100.000"	"89.3410"	"31295"	"31295"	"31280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.9"	""	"73.2"	""	"54.6"	""	"47.8"	"0.2"	"78.3"	"84.6"	""	"624"	"24"	"34.000"	"27.000"	"0.120269247591721"	"14"	"0"	"0.0001876"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"739.37091"	"1477.73454"	"1477.73405"	"0.33"	"0.00025"	"7/110"	"7"	"110"	"408077.686523438"	"HCD"	"MS2"	"12.72143"	"28.5"	"100.000"	"89.6412"	"31415"	"31415"	"31398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"44.5"	""	"35.3"	""	"28.2"	""	"61.8"	"65.5"	""	"627"	"39"	"34.000"	"27.000"	"0.00397408859946434"	"20"	"0"	"3.106E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEQIALDCTPR"	"[R].gEQIALDcTPR.[E]"	"N-Term(TMT6plex); C8(Methylthio)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"739.37115"	"1477.73503"	"1477.73405"	"0.66"	"0.00049"	"7/110"	"7"	"110"	"580463.295776367"	"HCD"	"MS2"	"36.73878"	"43.2"	"100.000"	"89.4733"	"31308"	"31308"	"31297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.2"	""	"55.4"	""	"69.9"	""	"46.7"	"1.4"	"89.7"	"82.7"	""	"652"	"44"	"35.000"	"28.000"	"0.00121120484685678"	"22"	"0"	"2.883E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEADPELSK"	"[K].mEADPELSk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"739.40149"	"1477.79570"	"1477.79725"	"-1.05"	"-0.00077"	"7/76"	"7"	"76"	"186043.562988281"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"63.2449"	"20730"	"20730"	"20702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"22.4"	""	"24.2"	""	"33.7"	""	"45.0"	"34.3"	""	"1028"	"13"	"37.000"	"30.000"	"2.63004463467718"	"23"	"0.008868"	"0.1125"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLAEQLYAGR"	"[R].dLLAEQLYAGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIE1"	"Protein THEM6 OS=Rattus norvegicus OX=10116 GN=Them6 PE=2 SV=1"	"Q5XIE1"	"Protein THEM6 OS=Rattus norvegicus OX=10116 GN=Them6 PE=2 SV=1"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"739.41406"	"1477.82085"	"1477.82121"	"-0.24"	"-0.00018"	"6/98"	"6"	"98"	"294374.083496094"	"HCD"	"MS2"	"30.13494"	"10.2"	"100.000"	"100.2224"	"35655"	"35655"	"35634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.7"	"4.9"	"12.7"	""	"6.7"	""	"19.5"	""	"25.6"	"20.0"	""	"1027"	"26"	"37.000"	"30.000"	"0.14273827629944"	"21"	"9.9E-05"	"0.0008957"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATNDSVVADK"	"[R].aTNDSVVADk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"739.41644"	"1477.82561"	"1477.82624"	"-0.43"	"-0.00032"	"9/100"	"9"	"100"	"1490864.1583252"	"HCD"	"MS2"	"56.97693"	"116.2"	"100.000"	"41.3066"	"11822"	"11822"	"11798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.1"	""	"140.0"	""	"162.4"	""	"159.5"	"0.0"	"223.8"	"223.2"	""	"985"	"23"	"36.000"	"29.000"	"0.262667436027653"	"22"	"0"	"9.522E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEMESAWR"	"[R].eVLEMESAWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"739.87933"	"1478.75139"	"1478.75108"	"0.21"	"0.00015"	"7/84"	"7"	"84"	"317792.403259277"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"101.3139"	"36097"	"36097"	"36080"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"32.3"	""	"32.6"	""	"14.9"	""	"33.7"	"41.8"	""	"752"	"31"	"35.000"	"28.000"	"0.029866741625633"	"20"	"9.9E-05"	"0.000621"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEMESAWR"	"[R].eVLEMESAWR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"739.87946"	"1478.75163"	"1478.75108"	"0.37"	"0.00028"	"8/84"	"8"	"84"	"256002.005493164"	"HCD"	"MS2"	"9.6553"	"16.3"	"100.000"	"101.4476"	"36177"	"36177"	"36162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.9"	""	"30.4"	""	"31.5"	""	"15.8"	""	"22.9"	"31.0"	""	"739"	"42"	"35.000"	"28.000"	"0.0021908590743231"	"23"	"0"	"0.0001264"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVANSAFVER"	"[K].eQVANSAFVER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"739.89392"	"1478.78057"	"1478.78007"	"0.33"	"0.00025"	"8/116"	"8"	"116"	"1037242.546875"	"HCD"	"MS2"	"15.92973"	"60.3"	"100.000"	"47.8164"	"14469"	"14469"	"14442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.4"	""	"74.3"	""	"86.4"	""	"92.8"	""	"105.9"	"123.3"	""	"943"	"65"	"36.000"	"29.000"	"1.51175598650433E-05"	"22"	"0"	"2.475E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"739.89435"	"1478.78142"	"1478.78344"	"-1.37"	"-0.00101"	"9/106"	"9"	"106"	"1651877.909729"	"HCD"	"MS2"	"0"	"73.2"	"100.000"	"55.7972"	"17710"	"17710"	"17694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.6"	""	"107.1"	""	"73.4"	""	"169.0"	""	"118.1"	"115.3"	""	"960"	"51"	"36.000"	"29.000"	"0.000402014055420903"	"21"	"0"	"8.89E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVANSAFVER"	"[K].eQVANSAFVER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"739.89478"	"1478.78227"	"1478.78007"	"1.49"	"0.00110"	"9/116"	"9"	"116"	"1182208.85437012"	"HCD"	"MS2"	"12.38948"	"65.1"	"100.000"	"48.1390"	"14562"	"14562"	"14541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.3"	""	"84.5"	""	"88.7"	""	"101.0"	"0.7"	"115.8"	"123.4"	""	"963"	"58"	"36.000"	"29.000"	"7.84506039716026E-05"	"21"	"0"	"1.348E-06"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"739.89490"	"1478.78252"	"1478.78344"	"-0.63"	"-0.00046"	"9/106"	"9"	"106"	"1101433.66711426"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"55.8928"	"17717"	"17717"	"17701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.7"	""	"77.0"	""	"60.5"	""	"113.2"	""	"87.5"	"88.0"	""	"959"	"41"	"36.000"	"29.000"	"0.00393358565506148"	"20"	"0"	"0.0002976"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.9783"	"0.0000"	"1"	"1"	"1"	"739.89502"	"1478.78276"	"1478.78344"	"-0.46"	"-0.00034"	"9/106"	"9"	"106"	"782011.245910645"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"55.5155"	"17598"	"17598"	"17583"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"63.0"	""	"44.0"	""	"92.2"	"0.7"	"68.1"	"58.0"	""	"959"	"46"	"36.000"	"29.000"	"0.00111119073465988"	"16"	"0.001261"	"0.009793"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMTNINDGLLR"	"[R].smTNINDGLLR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"739.89508"	"1478.78288"	"1478.78344"	"-0.38"	"-0.00028"	"9/106"	"9"	"106"	"1439125.19677734"	"HCD"	"MS2"	"0"	"63.7"	"100.000"	"56.1677"	"17825"	"17825"	"17816"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.0"	""	"86.1"	""	"65.2"	""	"146.6"	""	"116.3"	"99.2"	""	"959"	"50"	"36.000"	"29.000"	"0.000526973300007893"	"24"	"0"	"7.909E-06"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELDPEHQR"	"[K].lLELDPEHQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P54001"	"Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=P4ha1 PE=2 SV=2"	"P54001"	"Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=P4ha1 PE=2 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"493.60977"	"1478.81476"	"1478.81646"	"-1.15"	"-0.00057"	"11/82"	"11"	"82"	"455494.922912598"	"HCD"	"MS2"	"20.41845"	"14.0"	"100.000"	"69.0129"	"23071"	"23071"	"23045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"16.8"	""	"25.5"	""	"19.2"	""	"26.1"	"25.0"	""	"1006"	"32"	"37.000"	"30.000"	"0.0333094901361986"	"16"	"9.9E-05"	"0.000555"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLELDPEHQR"	"[K].lLELDPEHQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P54001"	"Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=P4ha1 PE=2 SV=2"	"P54001"	"Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=P4ha1 PE=2 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"493.60995"	"1478.81531"	"1478.81646"	"-0.78"	"-0.00038"	"11/82"	"11"	"82"	"612916.076171875"	"HCD"	"MS2"	"31.95344"	"17.2"	"100.000"	"69.0968"	"23071"	"23071"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"16.2"	""	"23.8"	""	"31.4"	""	"32.6"	"32.9"	""	"1005"	"33"	"37.000"	"30.000"	"0.0251267353825932"	"21"	"0"	"0.0001397"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLTDADAMK"	"[K].rLTDADAMk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"1"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"493.61816"	"1478.83994"	"1478.84012"	"-0.12"	"-0.00006"	"7/86"	"7"	"86"	"6373400.18389893"	"HCD"	"MS2"	"41.49721"	"264.1"	"100.000"	"42.1363"	"12125"	"12125"	"12104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"378.0"	""	"349.4"	""	"384.9"	""	"364.2"	"3.4"	"499.4"	"523.9"	""	"908"	"13"	"36.000"	"29.000"	"2.51800073682892"	"19"	"0.005392"	"0.06828"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAEVSESTK"	"[K].aVAEVSESTk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"Q62835"	"Rab GTPase-binding effector protein 2 OS=Rattus norvegicus OX=10116 GN=Rabep2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"739.92633"	"1478.84538"	"1478.84664"	"-0.85"	"-0.00063"	"8/82"	"8"	"82"	"187772.239379883"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"43.9406"	"12861"	"12861"	"12835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.5"	""	"16.3"	""	"20.3"	""	"29.2"	""	"37.1"	"34.8"	""	"895"	"18"	"36.000"	"29.000"	"0.751264798109845"	"14"	"0.00455"	"0.05292"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETYLNENLR"	"[R].vETYLNENLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.40332"	"1479.79936"	"1479.80047"	"-0.75"	"-0.00055"	"7/90"	"7"	"90"	"185940.501159668"	"HCD"	"MS2"	"18.77513"	"16.5"	"100.000"	"85.4164"	"29683"	"29683"	"29660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"16.1"	""	"20.9"	""	"25.9"	""	"37.5"	"46.4"	""	"1016"	"12"	"37.000"	"30.000"	"3.21265220499119"	"14"	"0.002035"	"0.01809"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETYLNENLR"	"[R].vETYLNENLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"P97690"	"Structural maintenance of chromosomes protein 3 OS=Rattus norvegicus OX=10116 GN=Smc3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"740.40405"	"1479.80083"	"1479.80047"	"0.24"	"0.00018"	"5/90"	"5"	"90"	"205377.925231934"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"85.4018"	"29707"	"29707"	"29683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"19.6"	""	"28.9"	""	"27.9"	""	"50.5"	"46.1"	""	"1026"	"3"	"37.000"	"30.000"	"25.889124565009"	"13"	"0.004672"	"0.05487"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ERSDTFINLR"	"[R].eRSDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"1"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"493.94135"	"1479.80948"	"1479.81171"	"-1.50"	"-0.00074"	"13/96"	"13"	"96"	"3086672.88171387"	"HCD"	"MS2"	"16.30393"	"63.8"	"100.000"	"50.8049"	"15648"	"15648"	"15621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.6"	""	"134.0"	""	"114.2"	""	"64.4"	""	"69.1"	"71.7"	""	"1013"	"38"	"37.000"	"30.000"	"0.00799060108102719"	"20"	"0.0001686"	"0.001299"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ERSDTFINLR"	"[R].eRSDTFINLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"1"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"493.94193"	"1479.81122"	"1479.81171"	"-0.33"	"-0.00016"	"7/96"	"7"	"96"	"3134898.50012207"	"HCD"	"MS2"	"18.44648"	"67.3"	"100.000"	"50.4840"	"15552"	"15552"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.1"	""	"140.3"	""	"136.7"	""	"66.1"	""	"73.4"	"75.1"	""	"987"	"36"	"36.000"	"29.000"	"0.0113837973763335"	"25"	"0"	"0.000154"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVNGEFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"493.95636"	"1479.85453"	"1479.85715"	"-1.77"	"-0.00087"	"8/92"	"8"	"92"	"967461.526489258"	"HCD"	"MS2"	"33.89575"	"39.3"	"100.000"	"61.1574"	"19885"	"19885"	"19864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.1"	""	"49.8"	""	"56.1"	""	"64.1"	""	"69.0"	"76.9"	""	"817"	"21"	"36.000"	"29.000"	"0.295251464771487"	"14"	"0.0001686"	"0.001033"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVNGEFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"740.43243"	"1479.85759"	"1479.85715"	"0.30"	"0.00022"	"9/92"	"9"	"92"	"677725.87512207"	"HCD"	"MS2"	"23.43307"	"67.0"	"100.000"	"61.1783"	"19893"	"19893"	"19872"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.8"	""	"81.6"	""	"99.1"	""	"105.6"	""	"118.3"	"134.6"	""	"782"	"64"	"35.000"	"28.000"	"1.56018736823598E-05"	"23"	"0"	"2.8E-06"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVNGEFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"493.95782"	"1479.85892"	"1479.85715"	"1.20"	"0.00059"	"8/92"	"8"	"92"	"1260726.97027588"	"HCD"	"MS2"	"45.28093"	"52.3"	"100.000"	"61.3623"	"19937"	"19937"	"19912"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.1"	""	"66.3"	""	"76.8"	""	"82.1"	"1.0"	"96.9"	"104.7"	""	"779"	"27"	"35.000"	"28.000"	"0.0720290127091961"	"21"	"0"	"0.0003418"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVNGEFk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"740.43365"	"1479.86003"	"1479.85715"	"1.95"	"0.00144"	"13/92"	"13"	"92"	"490441.214660645"	"HCD"	"MS2"	"23.8246"	"44.5"	"100.000"	"61.1805"	"19863"	"19863"	"19834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"63.7"	""	"63.6"	""	"57.9"	""	"90.3"	"85.1"	""	"774"	"43"	"35.000"	"28.000"	"0.00197565434990482"	"22"	"0"	"0.0001235"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"740.44934"	"1479.89141"	"1479.89354"	"-1.44"	"-0.00107"	"11/70"	"11"	"70"	"370436.999816895"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"56.6236"	"18007"	"18007"	"17989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"23.1"	""	"27.3"	""	"55.5"	"0.3"	"53.1"	"51.2"	""	"544"	"28"	"34.000"	"27.000"	"0.0410741801932648"	"18"	"0.00212"	"0.01926"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"493.96869"	"1479.89151"	"1479.89354"	"-1.37"	"-0.00067"	"12/70"	"12"	"70"	"5245097.38562012"	"HCD"	"MS2"	"3.906006"	"144.4"	"100.000"	"56.9238"	"18128"	"18128"	"18110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"184.4"	""	"130.8"	""	"137.5"	""	"273.6"	""	"342.8"	"307.5"	""	"543"	"39"	"34.000"	"27.000"	"0.00311723708236404"	"17"	"0"	"4.545E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"493.96869"	"1479.89151"	"1479.89354"	"-1.37"	"-0.00067"	"13/70"	"13"	"70"	"8680656.50360107"	"HCD"	"MS2"	"3.286985"	"232.8"	"100.000"	"56.5260"	"18002"	"18002"	"17992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.4"	""	"211.1"	""	"220.4"	""	"438.3"	""	"566.9"	"496.8"	""	"543"	"47"	"34.000"	"27.000"	"0.000595346539947647"	"20"	"0"	"2.265E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"493.96869"	"1479.89151"	"1479.89354"	"-1.37"	"-0.00067"	"7/70"	"7"	"70"	"7659226.57318115"	"HCD"	"MS2"	"19.38043"	"222.3"	"100.000"	"55.9599"	"17774"	"17774"	"17763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"284.1"	""	"223.8"	""	"227.0"	""	"463.2"	""	"467.2"	"448.6"	""	"543"	"45"	"34.000"	"27.000"	"0.000917846030299241"	"16"	"0"	"4.263E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"493.96890"	"1479.89215"	"1479.89354"	"-0.93"	"-0.00046"	"7/70"	"7"	"70"	"9085586.44158936"	"HCD"	"MS2"	"21.99866"	"258.4"	"100.000"	"56.3395"	"17893"	"17893"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"358.0"	""	"268.4"	""	"247.0"	""	"513.3"	""	"569.6"	"499.1"	""	"517"	"47"	"34.000"	"27.000"	"0.000543826726679634"	"17"	"0"	"8.253E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"493.96893"	"1479.89225"	"1479.89354"	"-0.87"	"-0.00043"	"14/70"	"14"	"70"	"18066308.9734497"	"HCD"	"MS2"	"2.69591"	"432.1"	"93.817"	"56.6100"	"18002"	"18002"	"17989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"541.5"	""	"418.7"	""	"356.2"	""	"879.5"	"2.2"	"1018.5"	"894.4"	""	"517"	"54"	"34.000"	"27.000"	"0.000101032371562336"	"21"	"0"	"1.036E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"740.44977"	"1479.89226"	"1479.89354"	"-0.86"	"-0.00064"	"12/70"	"12"	"70"	"368291.09564209"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"56.1983"	"17871"	"17871"	"17847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"32.8"	""	"33.6"	""	"56.9"	"1.1"	"64.2"	"55.9"	""	"517"	"33"	"34.000"	"27.000"	"0.0126316634890123"	"21"	"0.0001991"	"0.004249"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPEHAVLK"	"[K].dLPEHAVLk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"493.96902"	"1479.89252"	"1479.89354"	"-0.69"	"-0.00034"	"14/70"	"14"	"70"	"16920115.369751"	"HCD"	"MS2"	"5.903213"	"430.1"	"100.000"	"56.2282"	"17883"	"17883"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"581.2"	""	"400.2"	""	"381.7"	""	"875.0"	"1.1"	"984.9"	"865.0"	""	"517"	"54"	"34.000"	"27.000"	"0.000100106101212238"	"21"	"0"	"6.536E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"740.87030"	"1480.73332"	"1480.73372"	"-0.26"	"-0.00020"	"9/98"	"9"	"98"	"979867.651367188"	"HCD"	"MS2"	"21.7081"	"56.4"	"100.000"	"98.7718"	"35096"	"35096"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.9"	""	"64.6"	""	"62.9"	""	"80.2"	""	"120.6"	"117.8"	""	"637"	"65"	"35.000"	"28.000"	"9.1014258806492E-06"	"27"	"0"	"3.472E-07"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"494.24954"	"1480.73407"	"1480.73372"	"0.24"	"0.00012"	"10/98"	"10"	"98"	"1482289.57763672"	"HCD"	"MS2"	"25.18529"	"25.9"	"100.000"	"99.0770"	"35219"	"35219"	"35202"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"43.7"	""	"35.0"	""	"39.9"	""	"33.2"	"37.3"	""	"639"	"27"	"35.000"	"28.000"	"0.0662934868826844"	"26"	"0.0001686"	"0.001263"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.6222"	"0.0000"	"1"	"1"	"1"	"494.24966"	"1480.73444"	"1480.73372"	"0.49"	"0.00024"	"13/98"	"13"	"98"	"1609681.40618896"	"HCD"	"MS2"	"22.20385"	"25.7"	"100.000"	"99.0092"	"35162"	"35162"	"35145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.9"	""	"39.5"	""	"33.4"	""	"40.3"	""	"31.2"	"49.7"	""	"640"	"45"	"35.000"	"28.000"	"0.0009186497862479"	""	"0"	"0.0001131"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"740.87103"	"1480.73479"	"1480.73372"	"0.72"	"0.00054"	"10/98"	"10"	"98"	"1303710.7454834"	"HCD"	"MS2"	"2.363016"	"69.5"	"100.000"	"99.0726"	"35218"	"35218"	"35202"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.5"	""	"74.5"	""	"85.1"	""	"86.8"	""	"154.6"	"155.0"	""	"661"	"55"	"35.000"	"28.000"	"0.000103316923083447"	"26"	"0"	"2.08E-06"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"494.24982"	"1480.73490"	"1480.73372"	"0.80"	"0.00039"	"11/98"	"11"	"98"	"722406.010375977"	"HCD"	"MS2"	"28.19157"	"14.5"	"100.000"	"98.7533"	"35089"	"35089"	"35068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.4"	""	"15.9"	""	"15.7"	""	"26.5"	""	"24.3"	"26.3"	""	"655"	"42"	"35.000"	"28.000"	"0.00191078271649651"	""	"0"	"0.0002921"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.7119"	"0.0000"	"1"	"1"	"1"	"740.87115"	"1480.73503"	"1480.73372"	"0.89"	"0.00066"	"10/98"	"10"	"98"	"1664587.35174561"	"HCD"	"MS2"	"2.111196"	"89.1"	"100.000"	"99.0048"	"35161"	"35161"	"35145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.4"	""	"96.9"	""	"95.7"	""	"126.2"	"0.8"	"195.8"	"209.8"	""	"655"	"59"	"35.000"	"28.000"	"4.01061805259304E-05"	""	"0"	"2.778E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"740.87128"	"1480.73528"	"1480.73372"	"1.05"	"0.00078"	"10/98"	"10"	"98"	"773599.466918945"	"HCD"	"MS2"	"27.63511"	"47.0"	"100.000"	"98.7067"	"35040"	"35040"	"35026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.0"	""	"51.9"	""	"66.8"	""	"72.0"	"0.3"	"96.1"	"91.1"	""	"655"	"61"	"35.000"	"28.000"	"2.51890219193865E-05"	"26"	"0"	"1.014E-06"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"494.25034"	"1480.73645"	"1480.73372"	"1.85"	"0.00091"	"12/98"	"12"	"98"	"706317.713562012"	"HCD"	"MS2"	"11.14272"	"15.1"	"100.000"	"98.7182"	"35045"	"35045"	"35026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"21.2"	""	"15.5"	""	"26.6"	""	"28.2"	"26.3"	""	"656"	"40"	"35.000"	"28.000"	"0.00333329571261589"	""	"0"	"0.0003454"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDSDQELYR"	"[K].lLDSDQELYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P26817"	"Beta-adrenergic receptor kinase 1 OS=Rattus norvegicus OX=10116 GN=Grk2 PE=1 SV=1"	"P26817"	"Beta-adrenergic receptor kinase 1 OS=Rattus norvegicus OX=10116 GN=Grk2 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"740.89636"	"1480.78545"	"1480.78449"	"0.65"	"0.00048"	"9/88"	"9"	"88"	"150656.625732422"	"HCD"	"MS2"	"17.07928"	"9.1"	"100.000"	"87.1437"	"30373"	"30373"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"10.2"	""	"14.4"	""	"12.9"	""	"18.3"	"19.2"	""	"899"	"17"	"36.000"	"29.000"	"0.837008167929959"	"19"	"0.005589"	"0.07046"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQFDLENK"	"[K].qqFDLENk.[F]"	"N-Term(TMT6plex); Q2(Deamidated); K8(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"740.90619"	"1480.80510"	"1480.80478"	"0.22"	"0.00016"	"5/74"	"5"	"74"	"380121.116027832"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"71.6859"	"24124"	"24124"	"24100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.8"	""	"34.5"	""	"57.2"	""	"62.2"	""	"78.3"	"79.4"	""	"925"	"22"	"36.000"	"29.000"	"0.309109061875484"	"21"	"0.001049"	"0.008505"	"0.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQFDLENK"	"[K].qqFDLENk.[F]"	"N-Term(TMT6plex); Q2(Deamidated); K8(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"2"	"2"	"0.4091"	"0.0000"	"1"	"1"	"1"	"740.90680"	"1480.80632"	"1480.80478"	"1.04"	"0.00077"	"6/74"	"6"	"74"	"426505.198608398"	"HCD"	"MS2"	"24.9928"	"45.3"	"100.000"	"71.8650"	"24228"	"24228"	"24203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"44.2"	""	"60.3"	""	"64.6"	"0.3"	"95.0"	"89.0"	""	"913"	"22"	"36.000"	"29.000"	"0.277613628083735"	"22"	"0.007752"	"0.09926"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLYVTAIEDR"	"[R].aTLYVTAIEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.91425"	"1480.82121"	"1480.82087"	"0.23"	"0.00017"	"12/96"	"12"	"96"	"242303.426452637"	"HCD"	"MS2"	"16.81195"	"14.5"	"100.000"	"93.3559"	"32872"	"32872"	"32854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.7"	""	"21.1"	""	"23.5"	""	"22.0"	""	"22.2"	"24.3"	""	"886"	"34"	"36.000"	"29.000"	"0.0168812159763442"	"15"	"0"	"0.0002302"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLYVTAIEDR"	"[R].aTLYVTAIEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.91449"	"1480.82170"	"1480.82087"	"0.56"	"0.00041"	"13/96"	"13"	"96"	"267672.534606934"	"HCD"	"MS2"	"13.21495"	"14.5"	"100.000"	"93.5514"	"32987"	"32987"	"32968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"18.2"	""	"21.7"	""	"21.9"	""	"30.4"	"24.0"	""	"882"	"35"	"36.000"	"29.000"	"0.0146028824573823"	"15"	"0"	"0.0001702"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLYVTAIEDR"	"[R].aTLYVTAIEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.91467"	"1480.82207"	"1480.82087"	"0.81"	"0.00060"	"4/96"	"4"	"96"	"147607.545288086"	"HCD"	"MS2"	"21.84684"	"11.2"	"100.000"	"93.2313"	"32859"	"32859"	"32832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"14.7"	""	"15.8"	""	"19.1"	""	"19.7"	"21.1"	""	"882"	"9"	"36.000"	"29.000"	"5.61614858728348"	"13"	"0.002166"	"0.01968"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLYVTAIEDR"	"[R].aTLYVTAIEDR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"740.91522"	"1480.82317"	"1480.82087"	"1.55"	"0.00115"	"7/96"	"7"	"96"	"204335.143859863"	"HCD"	"MS2"	"8.772407"	"12.9"	"100.000"	"93.6698"	"32999"	"32999"	"32980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"16.1"	""	"19.8"	""	"20.6"	""	"25.5"	"26.1"	""	"912"	"28"	"36.000"	"29.000"	"0.0676028246826554"	"19"	"0"	"0.0003045"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"740.92371"	"1480.84014"	"1480.84117"	"-0.70"	"-0.00052"	"9/92"	"9"	"92"	"558840.397705078"	"HCD"	"MS2"	"13.61036"	"50.8"	"100.000"	"67.8964"	"22584"	"22584"	"22564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.6"	""	"58.7"	""	"77.9"	""	"84.4"	""	"98.6"	"93.7"	""	"792"	"55"	"35.000"	"28.000"	"0.000112900323393155"	"20"	"0"	"1.514E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"740.92389"	"1480.84050"	"1480.84117"	"-0.45"	"-0.00033"	"8/92"	"8"	"92"	"528239.394165039"	"HCD"	"MS2"	"22.13345"	"47.1"	"100.000"	"67.9437"	"22635"	"22635"	"22611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"63.1"	""	"64.1"	""	"77.6"	""	"84.8"	"101.8"	""	"796"	"55"	"35.000"	"29.000"	"0.000140566901577199"	"22"	"0"	"2.954E-06"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"740.92389"	"1480.84050"	"1480.84117"	"-0.45"	"-0.00033"	"6/92"	"6"	"92"	"976399.407409668"	"HCD"	"MS2"	"8.783385"	"77.8"	"100.000"	"65.0271"	"21454"	"21454"	"21434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.8"	""	"82.9"	""	"96.5"	""	"139.5"	"1.2"	"165.9"	"151.8"	""	"796"	"27"	"35.000"	"29.000"	"0.0866728489396557"	"19"	"9.9E-05"	"0.0007108"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAVVNGEFK"	"[K].gTAVVnGEFk.[E]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"Q9Z0V6"	"Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Prdx3 PE=1 SV=2"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"740.92401"	"1480.84075"	"1480.84117"	"-0.28"	"-0.00021"	"8/92"	"8"	"92"	"869052.19342041"	"HCD"	"MS2"	"0"	"68.2"	"100.000"	"64.8052"	"21330"	"21330"	"21311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.6"	""	"84.4"	""	"88.3"	""	"114.2"	""	"124.3"	"128.9"	""	"790"	"53"	"35.000"	"28.000"	"0.000192573753590838"	"22"	"0"	"2.544E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSDLPGIVAVR"	"[R].qPSDLPGIVAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"740.93793"	"1480.86858"	"1480.86849"	"0.06"	"0.00004"	"3/112"	"3"	"112"	"120355.240539551"	"HCD"	"MS2"	"100"	"7.2"	"100.000"	"90.2969"	"31640"	"31640"	"31617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.5"	""	"5.4"	""	"8.3"	""	"13.1"	""	"16.6"	"20.9"	""	"653"	"3"	"35.000"	"28.000"	"16.0281421563825"	"13"	"0.00714"	"0.09151"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPSDLPGIVAVR"	"[R].qPSDLPGIVAVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"740.93884"	"1480.87041"	"1480.86849"	"1.29"	"0.00096"	"4/112"	"4"	"112"	"117564.328186035"	"HCD"	"MS2"	"45.46215"	"8.3"	"100.000"	"90.0377"	"31574"	"31574"	"31555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"9.2"	""	"8.7"	""	"14.4"	""	"16.8"	"21.0"	""	"660"	"10"	"35.000"	"28.000"	"3.12258263250711"	"14"	"0.008135"	"0.1033"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNDFAEDSLR"	"[K].wNDFAEDSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.36389"	"1481.72051"	"1481.72222"	"-1.16"	"-0.00086"	"6/98"	"6"	"98"	"279101.001647949"	"HCD"	"MS2"	"12.2777"	"20.3"	"100.000"	"99.7681"	"35470"	"35470"	"35445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"28.3"	""	"27.3"	""	"30.8"	""	"45.3"	"42.9"	""	"577"	"27"	"34.000"	"27.000"	"0.0569043959369135"	"14"	"0.0001686"	"0.00143"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WNDFAEDSLR"	"[K].wNDFAEDSLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.36420"	"1481.72112"	"1481.72222"	"-0.75"	"-0.00055"	"9/98"	"9"	"98"	"359194.282348633"	"HCD"	"MS2"	"20.56705"	"20.7"	"100.000"	"99.8526"	"35532"	"35532"	"35511"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"20.9"	""	"24.8"	""	"33.6"	""	"45.8"	"49.1"	""	"588"	"46"	"34.000"	"27.000"	"0.000769745804416381"	"15"	"0"	"3.432E-05"	"0.749"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEDTAAEK"	"[R].fIEDTAAEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.41547"	"1481.82366"	"1481.82518"	"-1.03"	"-0.00076"	"13/74"	"13"	"74"	"431785.719116211"	"HCD"	"MS2"	"25.69887"	"40.4"	"100.000"	"71.9434"	"24229"	"24229"	"24207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.4"	""	"56.3"	""	"58.1"	""	"59.3"	""	"74.0"	"76.3"	""	"886"	"18"	"36.000"	"29.000"	"0.745424609054218"	"14"	"0.0001991"	"0.004568"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVYEEAGVK"	"[R].eVYEEAGVk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99MY2"	"Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Nudt4 PE=2 SV=1"	"Q99MY2"	"Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Nudt4 PE=2 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"741.41571"	"1481.82414"	"1481.82518"	"-0.70"	"-0.00052"	"7/72"	"7"	"72"	"327893.46295166"	"HCD"	"MS2"	"19.84222"	"28.5"	"100.000"	"54.5072"	"17153"	"17153"	"17127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.3"	""	"38.8"	""	"50.2"	""	"34.7"	""	"56.6"	"54.8"	""	"883"	"33"	"36.000"	"29.000"	"0.0205556260290386"	""	"0"	"0.0001052"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTEAVEAK"	"[K].eFTEAVEAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"741.41614"	"1481.82500"	"1481.82518"	"-0.12"	"-0.00009"	"8/76"	"8"	"76"	"421516.015319824"	"HCD"	"MS2"	"27.47314"	"38.6"	"100.000"	"69.9667"	"23459"	"23459"	"23435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.2"	""	"59.6"	""	"49.1"	""	"61.7"	"0.5"	"77.6"	"72.8"	""	"872"	"49"	"36.000"	"29.000"	"0.000607416366084152"	"22"	"0"	"3.88E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQEELQHLR"	"[R].sIQEELQHLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"494.61349"	"1481.82593"	"1481.82736"	"-0.96"	"-0.00048"	"14/94"	"14"	"94"	"1935570.01696777"	"HCD"	"MS2"	"31.91335"	"42.7"	"100.000"	"72.3870"	"24405"	"24405"	"24384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.9"	""	"62.5"	""	"52.5"	""	"72.3"	""	"72.9"	"81.4"	""	"886"	"52"	"36.000"	"29.000"	"0.000303671284318529"	""	"0"	"4.728E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTEAVEAK"	"[K].eFTEAVEAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"741.41669"	"1481.82610"	"1481.82518"	"0.62"	"0.00046"	"8/76"	"8"	"76"	"471811.822937012"	"HCD"	"MS2"	"14.99296"	"43.7"	"100.000"	"70.0435"	"23456"	"23456"	"23432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.2"	""	"63.5"	""	"53.2"	""	"68.2"	"0.8"	"79.0"	"95.5"	""	"886"	"51"	"36.000"	"29.000"	"0.000368471350598484"	""	"0"	"1.281E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQEELQHLR"	"[R].sIQEELQHLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.6981"	"0.0000"	"1"	"1"	"1"	"494.61362"	"1481.82630"	"1481.82736"	"-0.72"	"-0.00035"	"14/94"	"14"	"94"	"1972717.6862793"	"HCD"	"MS2"	"34.70445"	"49.9"	"100.000"	"72.5115"	"24485"	"24485"	"24462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.8"	""	"61.8"	""	"70.4"	""	"78.4"	"0.2"	"88.3"	"95.9"	""	"884"	"53"	"36.000"	"29.000"	"0.000202965521673896"	""	"0"	"1.379E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FIEDTAAEK"	"[R].fIEDTAAEk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"741.41681"	"1481.82634"	"1481.82518"	"0.78"	"0.00058"	"7/74"	"7"	"74"	"458213.522216797"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"72.0564"	"24301"	"24301"	"24282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.1"	""	"54.9"	""	"58.0"	""	"79.1"	""	"75.6"	"86.1"	""	"884"	"25"	"36.000"	"29.000"	"0.137854919616952"	"21"	"9.9E-05"	"0.000597"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIQEELQHLR"	"[R].sIQEELQHLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"494.61368"	"1481.82648"	"1481.82736"	"-0.59"	"-0.00029"	"13/94"	"13"	"94"	"1855736.42150879"	"HCD"	"MS2"	"59.84101"	"52.1"	"100.000"	"72.8136"	"24608"	"24608"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.9"	""	"68.7"	""	"71.9"	""	"79.2"	""	"107.0"	"101.5"	""	"879"	"40"	"36.000"	"29.000"	"0.00468768995280698"	"21"	"0"	"0.0001423"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"741.42102"	"1481.83476"	"1481.83641"	"-1.11"	"-0.00082"	"8/82"	"8"	"82"	"813886.887023926"	"HCD"	"MS2"	"100"	"71.5"	"100.000"	"42.8282"	"12442"	"12442"	"12414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.3"	""	"114.8"	""	"103.3"	""	"84.6"	""	"134.9"	"148.3"	""	"849"	"33"	"36.000"	"29.000"	"0.0214722569020322"	"19"	"0"	"5.244E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"741.42151"	"1481.83574"	"1481.83641"	"-0.45"	"-0.00034"	"8/82"	"8"	"82"	"1275335.59112549"	"HCD"	"MS2"	"17.19254"	"107.1"	"100.000"	"43.0352"	"12492"	"12492"	"12473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.3"	""	"170.2"	""	"145.6"	""	"149.5"	""	"201.3"	"208.2"	""	"850"	"52"	"36.000"	"29.000"	"0.000276942067475859"	"24"	"0"	"0.0001097"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"741.42181"	"1481.83635"	"1481.83641"	"-0.04"	"-0.00003"	"8/82"	"8"	"82"	"430373.376159668"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"43.1757"	"12584"	"12584"	"12555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"56.9"	""	"53.9"	""	"53.0"	""	"70.9"	"99.0"	""	"843"	"56"	"36.000"	"29.000"	"0.000118521620001315"	"25"	"0"	"2.439E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQYESVAAK"	"[R].qQYESVAAk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"741.42181"	"1481.83635"	"1481.83641"	"-0.04"	"-0.00003"	"7/82"	"7"	"82"	"328324.451843262"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"43.3780"	"12632"	"12632"	"12608"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.4"	""	"39.0"	""	"41.8"	""	"38.9"	"0.2"	"54.9"	"62.0"	""	"843"	"46"	"36.000"	"29.000"	"0.0010064624557479"	"22"	"0"	"0.0001433"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEELYAIK"	"[K].gTEELYAIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"741.43420"	"1481.86113"	"1481.86157"	"-0.29"	"-0.00022"	"7/68"	"7"	"68"	"440183.04083252"	"HCD"	"MS2"	"33.17334"	"44.6"	"100.000"	"83.3980"	"28868"	"28868"	"28848"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.0"	""	"59.2"	""	"66.0"	""	"66.8"	"0.2"	"81.2"	"83.2"	""	"696"	"42"	"35.000"	"28.000"	"0.00205389975899802"	"26"	"0"	"6.677E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEELYAIK"	"[K].gTEELYAIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.43433"	"1481.86138"	"1481.86157"	"-0.13"	"-0.00010"	"10/68"	"10"	"68"	"326763.055236816"	"HCD"	"MS2"	"61.45868"	"37.2"	"100.000"	"83.2657"	"28843"	"28843"	"28820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.3"	""	"53.0"	""	"52.8"	""	"52.4"	""	"71.4"	"68.2"	""	"696"	"20"	"35.000"	"28.000"	"0.378076117018738"	"14"	"0.002189"	"0.02061"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEELYAIK"	"[K].gTEELYAIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"741.43457"	"1481.86186"	"1481.86157"	"0.20"	"0.00015"	"13/68"	"13"	"68"	"415083.702453613"	"HCD"	"MS2"	"30.44244"	"39.9"	"100.000"	"83.5721"	"28967"	"28967"	"28949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.4"	""	"51.6"	""	"59.8"	""	"55.9"	""	"71.6"	"79.9"	""	"692"	"46"	"35.000"	"28.000"	"0.000970680038731293"	"25"	"0"	"0.0001014"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTEELYAIK"	"[K].gTEELYAIk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"P05696"	"Protein kinase C alpha type OS=Rattus norvegicus OX=10116 GN=Prkca PE=1 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"741.43469"	"1481.86211"	"1481.86157"	"0.37"	"0.00027"	"7/68"	"7"	"68"	"196809.061462402"	"HCD"	"MS2"	"12.76368"	"19.9"	"100.000"	"83.6931"	"28987"	"28987"	"28972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"32.7"	""	"27.5"	""	"27.1"	""	"39.1"	"38.6"	""	"691"	"37"	"35.000"	"28.000"	"0.00650800760418727"	"24"	"9.9E-05"	"0.0009476"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINK"	"[K].eGVHGGLINk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"494.63239"	"1481.88260"	"1481.88403"	"-0.97"	"-0.00048"	"14/74"	"14"	"74"	"6265243.58129883"	"HCD"	"MS2"	"21.33122"	"181.2"	"91.050"	"42.0951"	"12108"	"12108"	"12088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.1"	""	"242.2"	""	"252.1"	""	"276.1"	"1.3"	"333.1"	"362.0"	""	"578"	"34"	"34.000"	"27.000"	"0.0119921718321331"	"20"	"0"	"5.065E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINK"	"[K].eGVHGGLINk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"494.63239"	"1481.88260"	"1481.88403"	"-0.97"	"-0.00048"	"8/74"	"8"	"74"	"14540342.0218506"	"HCD"	"MS2"	"7.890659"	"369.6"	"100.000"	"41.7772"	"11979"	"11979"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"597.4"	""	"505.4"	""	"496.1"	""	"591.6"	""	"659.3"	"650.4"	""	"578"	"37"	"34.000"	"27.000"	"0.00629358124210063"	"15"	"0"	"1.984E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINK"	"[K].eGVHGGLINk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"494.63275"	"1481.88370"	"1481.88403"	"-0.22"	"-0.00011"	"8/74"	"8"	"74"	"11805190.0944824"	"HCD"	"MS2"	"12.54675"	"303.5"	"100.000"	"41.6122"	"11946"	"11946"	"11925"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"487.4"	""	"420.2"	""	"388.1"	""	"489.6"	"5.3"	"559.7"	"523.3"	""	"575"	"34"	"34.000"	"27.000"	"0.0108053253732928"	"15"	"0"	"1.362E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVHGGLINK"	"[K].eGVHGGLINk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"494.63284"	"1481.88398"	"1481.88403"	"-0.04"	"-0.00002"	"8/74"	"8"	"74"	"9767141.15350342"	"HCD"	"MS2"	"13.58563"	"265.2"	"100.000"	"41.9058"	"12066"	"12066"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"384.6"	""	"336.8"	""	"367.1"	""	"412.9"	"0.2"	"491.3"	"520.8"	""	"575"	"37"	"34.000"	"27.000"	"0.00642152014063778"	"19"	"0"	"1.497E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMGSLDAMDK"	"[R].gMGSLDAMDk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"741.88812"	"1482.76897"	"1482.76966"	"-0.46"	"-0.00034"	"8/82"	"8"	"82"	"237516.691040039"	"HCD"	"MS2"	"0"	"24.3"	"100.000"	"76.6360"	"26132"	"26132"	"26104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.5"	""	"33.8"	""	"27.5"	""	"28.1"	""	"49.2"	"47.0"	""	"757"	"36"	"35.000"	"28.000"	"0.00975137557925474"	"21"	"0.000885"	"0.007746"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELNADLFR"	"[R].fEELNADLFR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"741.89313"	"1482.77898"	"1482.77901"	"-0.02"	"-0.00002"	"9/92"	"9"	"92"	"2096309.09936523"	"HCD"	"MS2"	"0"	"116.4"	"100.000"	"112.0096"	"40337"	"40337"	"40319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.0"	""	"142.1"	""	"158.6"	""	"192.0"	""	"227.0"	"233.1"	""	"826"	"51"	"36.000"	"29.000"	"0.000350711536189997"	"22"	"0"	"1.044E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELNADLFR"	"[R].fEELNADLFR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018; P14659"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"741.89337"	"1482.77947"	"1482.77901"	"0.31"	"0.00023"	"9/92"	"9"	"92"	"3039578.81091309"	"HCD"	"MS2"	"0"	"151.3"	"100.000"	"111.9124"	"40284"	"40284"	"40269"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.3"	""	"183.9"	""	"191.7"	""	"243.9"	"1.8"	"308.1"	"301.6"	""	"827"	"54"	"36.000"	"29.000"	"0.000177204813184341"	"22"	"0"	"1.117E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSmTk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"741.89728"	"1482.78728"	"1482.78742"	"-0.09"	"-0.00007"	"12/84"	"12"	"84"	"372631.076660156"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"36.9760"	"10072"	"10072"	"10042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"23.9"	""	"29.6"	""	"62.3"	""	"57.0"	"52.6"	""	"868"	"38"	"36.000"	"29.000"	"0.00636047762974865"	"22"	"0.0001686"	"0.001417"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEGEGSMTK"	"[K].lGEGEGSmTk.[E]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"B1H267"	"Sorting nexin-5 OS=Rattus norvegicus OX=10116 GN=Snx5 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"741.89758"	"1482.78789"	"1482.78742"	"0.32"	"0.00024"	"12/84"	"12"	"84"	"300572.739868164"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"36.9777"	"10035"	"10035"	"10004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"20.0"	""	"22.5"	""	"53.8"	"0.7"	"44.3"	"39.0"	""	"875"	"30"	"36.000"	"29.000"	"0.0479709210812643"	"22"	"0.0001991"	"0.005951"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVLAHLEEER"	"[R].tGVLAHLEEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"494.94189"	"1482.81113"	"1482.81137"	"-0.16"	"-0.00008"	"8/98"	"8"	"98"	"1413450.70355225"	"HCD"	"MS2"	"40.9721"	"35.4"	"100.000"	"60.3196"	"19545"	"19545"	"19525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.1"	""	"40.9"	""	"44.1"	""	"69.4"	""	"69.9"	"76.7"	""	"883"	"27"	"36.000"	"29.000"	"0.0961458864493919"	"16"	"0"	"9.575E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLTEPAQPAR"	"[R].gVDLTEPAQPAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"741.90948"	"1482.81169"	"1482.81137"	"0.22"	"0.00016"	"9/100"	"9"	"100"	"757952.63458252"	"HCD"	"MS2"	"20.34248"	"36.9"	"100.000"	"51.9475"	"16108"	"16108"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.1"	""	"50.2"	""	"47.8"	""	"60.6"	"0.4"	"76.1"	"73.1"	""	"889"	"36"	"36.000"	"29.000"	"0.0121024073144063"	"17"	"0"	"1.945E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDLTEPAQPAR"	"[R].gVDLTEPAQPAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"741.90979"	"1482.81230"	"1482.81137"	"0.63"	"0.00047"	"7/100"	"7"	"100"	"710691.961547852"	"HCD"	"MS2"	"15.88035"	"35.4"	"100.000"	"51.6534"	"16023"	"16023"	"15999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"42.2"	""	"45.5"	""	"70.5"	""	"63.6"	"70.0"	""	"875"	"20"	"36.000"	"29.000"	"0.399004742218211"	"17"	"0.0001991"	"0.005694"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGVLAHLEEER"	"[R].tGVLAHLEEER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q63862"	"Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"494.94229"	"1482.81232"	"1482.81137"	"0.64"	"0.00032"	"8/98"	"8"	"98"	"1479567.79663086"	"HCD"	"MS2"	"27.09051"	"35.2"	"100.000"	"60.4234"	"19554"	"19554"	"19524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.2"	""	"36.6"	""	"34.9"	""	"69.1"	""	"90.4"	"68.3"	""	"875"	"34"	"36.000"	"29.000"	"0.0159947721330742"	"20"	"0"	"9.045E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLTDVYNK"	"[K].dGLTDVYNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"741.91333"	"1482.81938"	"1482.82043"	"-0.71"	"-0.00052"	"8/74"	"8"	"74"	"662290.69708252"	"HCD"	"MS2"	"4.637965"	"58.2"	"100.000"	"71.1520"	"23906"	"23906"	"23886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.0"	""	"48.3"	""	"54.7"	""	"107.4"	"0.6"	"130.3"	"132.8"	""	"884"	"49"	"36.000"	"29.000"	"0.000532625885644335"	"26"	"0"	"6.103E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYEAALNSK"	"[R].eYEAALNSk.[D]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"741.91339"	"1482.81951"	"1482.82043"	"-0.62"	"-0.00046"	"7/82"	"7"	"82"	"305989.946044922"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"58.2109"	"18653"	"18653"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"16.6"	""	"21.5"	""	"46.0"	""	"73.2"	"73.5"	""	"886"	"33"	"36.000"	"29.000"	"0.0204834792479872"	"22"	"0.0001686"	"0.001785"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLTDVYNK"	"[K].dGLTDVYNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"741.91345"	"1482.81963"	"1482.82043"	"-0.54"	"-0.00040"	"8/74"	"8"	"74"	"1080498.08825684"	"HCD"	"MS2"	"6.094114"	"95.1"	"100.000"	"70.9787"	"23867"	"23867"	"23852"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.4"	""	"72.7"	""	"90.5"	""	"185.7"	"0.5"	"192.0"	"213.5"	""	"886"	"49"	"36.000"	"29.000"	"0.000533830921584707"	"26"	"0"	"8.337E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLTDVYNK"	"[K].dGLTDVYNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"494.94476"	"1482.81974"	"1482.82043"	"-0.47"	"-0.00023"	"9/74"	"9"	"74"	"1931564.97589111"	"HCD"	"MS2"	"16.09015"	"67.4"	"100.000"	"71.0917"	"23913"	"23913"	"23893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.3"	""	"69.4"	""	"68.7"	""	"126.2"	""	"144.8"	"152.0"	""	"886"	"31"	"36.000"	"29.000"	"0.038851136376663"	"23"	"0.0001991"	"0.002673"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLTDVYNK"	"[K].dGLTDVYNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"494.94479"	"1482.81983"	"1482.82043"	"-0.41"	"-0.00020"	"9/74"	"9"	"74"	"1866686.85778809"	"HCD"	"MS2"	"13.16719"	"64.5"	"100.000"	"71.0019"	"23845"	"23845"	"23826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.8"	""	"63.5"	""	"68.4"	""	"113.7"	""	"130.2"	"145.0"	""	"886"	"31"	"36.000"	"29.000"	"0.038406411096089"	"28"	"0.001718"	"0.01506"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQLSDSAK"	"[R].eFQLSDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"741.91357"	"1482.81987"	"1482.82043"	"-0.38"	"-0.00028"	"8/88"	"8"	"88"	"460332.071716309"	"HCD"	"MS2"	"16.85512"	"39.0"	"100.000"	"69.3055"	"23190"	"23190"	"23167"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.3"	""	"48.2"	""	"48.1"	""	"68.6"	""	"77.0"	"78.4"	""	"886"	"22"	"36.000"	"29.000"	"0.260257783170691"	"20"	"0"	"0.0003914"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLTDVYNK"	"[K].dGLTDVYNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"741.91376"	"1482.82024"	"1482.82043"	"-0.13"	"-0.00010"	"13/74"	"13"	"74"	"565799.081237793"	"HCD"	"MS2"	"10.61219"	"50.3"	"100.000"	"71.3011"	"23998"	"23998"	"23980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.3"	""	"44.6"	""	"43.9"	""	"85.0"	"0.1"	"115.7"	"119.2"	""	"882"	"39"	"36.000"	"29.000"	"0.00572056058503925"	"23"	"0"	"0.0001205"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGLTDVYNK"	"[K].dGLTDVYNk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"P17764"	"Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acat1 PE=1 SV=1"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"741.91376"	"1482.82024"	"1482.82043"	"-0.13"	"-0.00010"	"7/74"	"7"	"74"	"960283.068786621"	"HCD"	"MS2"	"9.341972"	"81.6"	"100.000"	"70.8523"	"23784"	"23784"	"23766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.7"	""	"65.1"	""	"74.9"	""	"157.5"	"2.0"	"172.4"	"181.2"	""	"882"	"35"	"36.000"	"29.000"	"0.0142376590767527"	"27"	"0"	"0.0001867"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQLSDSAK"	"[R].eFQLSDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.91394"	"1482.82060"	"1482.82043"	"0.12"	"0.00009"	"8/88"	"8"	"88"	"653677.762756348"	"HCD"	"MS2"	"5.927485"	"44.1"	"100.000"	"69.6166"	"23316"	"23316"	"23299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.8"	""	"48.8"	""	"45.9"	""	"74.7"	""	"93.5"	"92.1"	""	"888"	"27"	"36.000"	"29.000"	"0.0819186846115686"	"14"	"0.001615"	"0.0138"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQLSDSAK"	"[R].eFQLSDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"741.91437"	"1482.82146"	"1482.82043"	"0.69"	"0.00051"	"11/88"	"11"	"88"	"505704.630004883"	"HCD"	"MS2"	"10.99984"	"41.9"	"100.000"	"69.2418"	"23130"	"23130"	"23108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.2"	""	"51.7"	""	"43.0"	""	"71.9"	""	"88.3"	"85.6"	""	"879"	"18"	"36.000"	"29.000"	"0.779756276851227"	"20"	"0.002559"	"0.02553"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQLSDSAK"	"[R].eFQLSDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"Q9JID2"	"Guanine nucleotide-binding protein subunit alpha-11 OS=Rattus norvegicus OX=10116 GN=Gna11 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.91449"	"1482.82170"	"1482.82043"	"0.86"	"0.00064"	"12/88"	"12"	"88"	"702948.305847168"	"HCD"	"MS2"	"18.66563"	"49.1"	"100.000"	"69.5478"	"23254"	"23254"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.9"	""	"60.0"	""	"56.7"	""	"81.1"	"0.5"	"99.6"	"102.1"	""	"877"	"18"	"36.000"	"29.000"	"0.77619277822219"	"14"	"0.003529"	"0.03891"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"741.92657"	"1482.84587"	"1482.84776"	"-1.27"	"-0.00094"	"6/94"	"6"	"94"	"330172.490661621"	"HCD"	"MS2"	"42.1748"	"19.3"	"100.000"	"86.0316"	"29931"	"29931"	"29910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.5"	""	"24.6"	""	"21.7"	""	"35.6"	""	"36.3"	"37.4"	""	"752"	"45"	"35.000"	"28.000"	"0.00132491447511975"	"28"	"0.0001991"	"0.00325"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"741.92700"	"1482.84673"	"1482.84776"	"-0.70"	"-0.00052"	"5/94"	"5"	"94"	"166015.121520996"	"HCD"	"MS2"	"19.74352"	"11.5"	"100.000"	"86.8915"	"30305"	"30305"	"30288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"13.7"	""	"15.9"	""	"19.5"	""	"21.5"	"22.1"	""	"747"	"26"	"35.000"	"28.000"	"0.0949053305522667"	"18"	"0.0008247"	"0.007578"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"494.95377"	"1482.84674"	"1482.84776"	"-0.68"	"-0.00034"	"12/94"	"12"	"94"	"969359.696899414"	"HCD"	"MS2"	"22.49039"	"22.0"	"100.000"	"86.2991"	"30037"	"30037"	"30019"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"24.3"	""	"28.2"	""	"40.1"	"1.0"	"39.5"	"44.8"	""	"746"	"40"	"35.000"	"28.000"	"0.00349710628583353"	"22"	"0"	"6.492E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"494.95386"	"1482.84702"	"1482.84776"	"-0.50"	"-0.00025"	"10/94"	"10"	"94"	"710559.779846191"	"HCD"	"MS2"	"18.68476"	"17.1"	"100.000"	"86.5845"	"30182"	"30182"	"30164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.6"	""	"15.7"	""	"24.0"	""	"33.5"	""	"29.8"	"40.8"	""	"737"	"39"	"35.000"	"28.000"	"0.00434948154237662"	"20"	"0"	"4.568E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEASGPQLLPVR"	"[R].sEASGPQLLPVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"Q1HCL7"	"NAD kinase 2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nadk2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"741.92731"	"1482.84734"	"1482.84776"	"-0.28"	"-0.00021"	"8/104"	"8"	"104"	"531369.294250488"	"HCD"	"MS2"	"19.67411"	"30.8"	"100.000"	"68.2859"	"22742"	"22742"	"22716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	""	"42.7"	""	"43.7"	""	"44.6"	"1.3"	"53.5"	"70.8"	""	"732"	"35"	"35.000"	"28.000"	"0.0118981950843069"	"15"	"9.9E-05"	"0.00047"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"494.95398"	"1482.84739"	"1482.84776"	"-0.25"	"-0.00012"	"11/94"	"11"	"94"	"797152.061035156"	"HCD"	"MS2"	"11.06739"	"22.8"	"100.000"	"86.2870"	"30064"	"30064"	"30043"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.4"	""	"26.8"	""	"32.3"	""	"35.9"	"1.8"	"34.6"	"52.2"	""	"731"	"32"	"35.000"	"28.000"	"0.0243157338591737"	"25"	"9.9E-05"	"0.0006094"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"494.95401"	"1482.84748"	"1482.84776"	"-0.19"	"-0.00009"	"11/94"	"11"	"94"	"962453.392578125"	"HCD"	"MS2"	"32.3538"	"21.6"	"100.000"	"86.5804"	"30147"	"30147"	"30134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"27.6"	""	"28.4"	""	"38.5"	""	"44.5"	"43.5"	""	"731"	"39"	"35.000"	"28.000"	"0.00424509468358645"	"24"	"0"	"0.0001311"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"741.92743"	"1482.84758"	"1482.84776"	"-0.12"	"-0.00009"	"10/94"	"10"	"94"	"3318436.70825195"	"HCD"	"MS2"	"2.448887"	"133.6"	"100.000"	"86.3108"	"30042"	"30042"	"30032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.0"	""	"152.2"	""	"198.2"	""	"213.3"	"1.8"	"205.9"	"250.2"	""	"731"	"51"	"35.000"	"28.000"	"0.000297089553657978"	""	"0"	"4.502E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"741.92767"	"1482.84807"	"1482.84776"	"0.21"	"0.00016"	"5/94"	"5"	"94"	"289796.812255859"	"HCD"	"MS2"	"8.927565"	"15.4"	"100.000"	"86.8621"	"30259"	"30259"	"30245"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"16.7"	""	"22.7"	""	"28.3"	""	"27.1"	"25.0"	""	"743"	"34"	"35.000"	"28.000"	"0.0133032826383629"	""	"0.0001991"	"0.003295"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"741.92767"	"1482.84807"	"1482.84776"	"0.21"	"0.00016"	"10/94"	"10"	"94"	"2060258.87554932"	"HCD"	"MS2"	"3.552113"	"84.3"	"100.000"	"86.6054"	"30191"	"30191"	"30177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.6"	""	"100.4"	""	"117.7"	""	"124.4"	""	"144.6"	"170.7"	""	"743"	"50"	"35.000"	"28.000"	"0.000354779745706963"	"26"	"0"	"8.571E-07"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"741.92767"	"1482.84807"	"1482.84776"	"0.21"	"0.00016"	"10/94"	"10"	"94"	"2767662.90252686"	"HCD"	"MS2"	"2.323451"	"112.3"	"100.000"	"86.5853"	"30149"	"30149"	"30144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.5"	""	"125.9"	""	"142.8"	""	"182.6"	""	"201.9"	"230.3"	""	"743"	"54"	"35.000"	"28.000"	"0.000141240360733088"	""	"0"	"8.463E-07"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"741.92773"	"1482.84819"	"1482.84776"	"0.29"	"0.00022"	"10/94"	"10"	"94"	"3637918.71887207"	"HCD"	"MS2"	"1.001657"	"143.7"	"100.000"	"86.3149"	"30075"	"30075"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"233.2"	""	"181.3"	""	"205.2"	""	"230.5"	""	"235.8"	"276.0"	""	"744"	"49"	"35.000"	"28.000"	"0.000433054882940702"	"28"	"0"	"1.411E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVDPNIQAVR"	"[K].lEVDPNIQAVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"741.92816"	"1482.84905"	"1482.84776"	"0.87"	"0.00064"	"7/94"	"7"	"94"	"407516.245910645"	"HCD"	"MS2"	"25.55557"	"24.1"	"100.000"	"86.0312"	"29961"	"29961"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"30.2"	""	"27.7"	""	"39.8"	""	"49.3"	"46.8"	""	"724"	"38"	"35.000"	"28.000"	"0.00642256592082241"	"21"	"0.0001991"	"0.005423"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAADVHEVR"	"[R].kAADVHEVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"371.47440"	"1482.87575"	"1482.87928"	"-2.38"	"-0.00088"	"6/86"	"6"	"86"	"5037659.34515381"	"HCD"	"MS2"	"17.09313"	"243.9"	"100.000"	"23.3633"	"4610"	"4610"	"4604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"410.4"	""	"357.0"	""	"344.0"	""	"364.4"	"4.8"	"403.0"	"423.2"	""	"548"	"19"	"34.000"	"27.000"	"0.366227171533725"	"14"	"0.001348"	"0.01075"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAADVHEVR"	"[R].kAADVHEVR.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"371.47461"	"1482.87661"	"1482.87928"	"-1.80"	"-0.00067"	"8/86"	"8"	"86"	"5119663.26306152"	"HCD"	"MS2"	"24.7425"	"248.9"	"100.000"	"23.4512"	"4607"	"4607"	"4600"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"438.9"	""	"328.2"	""	"349.1"	""	"362.4"	"1.7"	"402.3"	"471.7"	""	"538"	"20"	"34.000"	"27.000"	"0.262272212545977"	"14"	"0.002189"	"0.02063"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"742.36841"	"1483.72954"	"1483.73001"	"-0.32"	"-0.00024"	"9/82"	"9"	"82"	"745042.917114258"	"HCD"	"MS2"	"1.92645"	"44.6"	"100.000"	"95.9602"	"33930"	"33930"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"78.9"	""	"61.3"	""	"39.2"	""	"87.4"	"95.4"	""	"572"	"49"	"34.000"	"27.000"	"0.000325361403745501"	"19"	"0"	"9.094E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"742.36859"	"1483.72991"	"1483.73001"	"-0.07"	"-0.00005"	"9/82"	"9"	"82"	"845894.446899414"	"HCD"	"MS2"	"2.092137"	"50.0"	"100.000"	"95.9644"	"33964"	"33964"	"33947"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.6"	""	"77.2"	""	"68.9"	""	"46.9"	""	"101.2"	"113.1"	""	"568"	"53"	"34.000"	"27.000"	"0.000155710658037523"	"20"	"0"	"2.397E-06"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9268"	"0.0000"	"1"	"1"	"1"	"742.36896"	"1483.73064"	"1483.73001"	"0.42"	"0.00031"	"14/82"	"14"	"82"	"481073.251586914"	"HCD"	"MS2"	"21.18235"	"28.1"	"100.000"	"95.6530"	"33805"	"33805"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"44.8"	""	"35.0"	""	"28.2"	"0.9"	"57.0"	"57.4"	""	"578"	"41"	"34.000"	"27.000"	"0.00224335416705692"	"18"	"0"	"1.189E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEMR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"742.36902"	"1483.73076"	"1483.73001"	"0.51"	"0.00037"	"14/82"	"14"	"82"	"365863.401123047"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"95.6621"	"33841"	"33841"	"33820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"32.1"	""	"32.6"	""	"26.8"	""	"43.9"	"40.2"	""	"578"	"45"	"34.000"	"27.000"	"0.000950381213231591"	"19"	"0"	"3.735E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSSGSAVVSGGSR"	"[R].gFSSGSAVVSGGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"742.38788"	"1483.76848"	"1483.77024"	"-1.18"	"-0.00088"	"11/124"	"11"	"124"	"787627.522277832"	"HCD"	"MS2"	"21.12022"	"48.4"	"100.000"	"42.3410"	"12209"	"12209"	"12184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.5"	""	"78.0"	""	"91.5"	""	"68.1"	""	"78.8"	"76.9"	""	"787"	"59"	"35.000"	"28.000"	"4.66600002403778E-05"	"22"	"0"	"1.9E-07"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSSGSAVVSGGSR"	"[R].gFSSGSAVVSGGSR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"742.38837"	"1483.76946"	"1483.77024"	"-0.53"	"-0.00039"	"12/124"	"12"	"124"	"789534.575927734"	"HCD"	"MS2"	"13.39865"	"48.4"	"100.000"	"42.1935"	"12183"	"12183"	"12161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.6"	""	"78.9"	""	"86.8"	""	"64.1"	""	"79.6"	"84.3"	""	"784"	"74"	"35.000"	"28.000"	"1.44639218639499E-06"	"24"	"0"	"1.682E-07"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFANGER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"742.39050"	"1483.77373"	"1483.77426"	"-0.36"	"-0.00026"	"9/104"	"9"	"104"	"854454.127380371"	"HCD"	"MS2"	"4.003048"	"48.1"	"100.000"	"80.7552"	"27801"	"27801"	"27782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.3"	""	"73.7"	""	"69.3"	""	"61.3"	""	"73.3"	"96.9"	""	"839"	"54"	"36.000"	"29.000"	"0.000178950108137268"	"26"	"0"	"2.956E-06"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFANGER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"495.26279"	"1483.77381"	"1483.77426"	"-0.30"	"-0.00015"	"11/104"	"11"	"104"	"791265.85144043"	"HCD"	"MS2"	"10.8335"	"14.4"	"100.000"	"80.7644"	"27832"	"27832"	"27811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"17.8"	""	"20.9"	""	"22.3"	""	"29.1"	"26.5"	""	"839"	"33"	"36.000"	"29.000"	"0.0222193814712551"	"22"	"9.9E-05"	"0.0007398"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFANGER.[W]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"742.39117"	"1483.77507"	"1483.77426"	"0.55"	"0.00041"	"9/104"	"9"	"104"	"946039.514648438"	"HCD"	"MS2"	"3.219708"	"52.0"	"100.000"	"80.8035"	"27848"	"27848"	"27827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.1"	""	"83.2"	""	"78.6"	""	"70.6"	""	"73.7"	"94.7"	""	"844"	"51"	"36.000"	"29.000"	"0.000315001376049048"	"26"	"0"	"5.798E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"742.88245"	"1484.75762"	"1484.75827"	"-0.44"	"-0.00033"	"8/104"	"8"	"104"	"527779.99017334"	"HCD"	"MS2"	"2.931317"	"24.3"	"100.000"	"89.2114"	"31243"	"31243"	"31228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"41.2"	""	"29.2"	""	"38.4"	""	"36.0"	"40.7"	""	"761"	"52"	"35.000"	"28.000"	"0.000238426575507823"	"21"	"0"	"3.576E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"742.88251"	"1484.75774"	"1484.75827"	"-0.36"	"-0.00027"	"14/104"	"14"	"104"	"516504.31829834"	"HCD"	"MS2"	"27.77805"	"29.3"	"100.000"	"87.7540"	"30653"	"30653"	"30635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.7"	""	"44.7"	""	"32.0"	""	"49.3"	""	"57.2"	"53.9"	""	"761"	"15"	"35.000"	"28.000"	"1.11008097882744"	"13"	"0.0001686"	"0.001124"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"742.88257"	"1484.75786"	"1484.75827"	"-0.28"	"-0.00021"	"12/104"	"12"	"104"	"533128.672546387"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"89.2954"	"31237"	"31237"	"31225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.4"	""	"23.5"	""	"36.7"	""	"39.5"	"1.0"	"40.5"	"49.0"	""	"760"	"44"	"35.000"	"28.000"	"0.00135451430701973"	"17"	"0"	"6.384E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"742.88275"	"1484.75823"	"1484.75827"	"-0.03"	"-0.00002"	"5/104"	"5"	"104"	"109510.961547852"	"HCD"	"MS2"	"23.97866"	"7.4"	"100.000"	"89.5232"	"31368"	"31368"	"31347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"9.9"	""	"9.9"	""	"14.0"	""	"8.1"	"16.2"	""	"759"	"23"	"35.000"	"28.000"	"0.209513388207047"	"27"	"0.0001991"	"0.005341"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"742.88287"	"1484.75847"	"1484.75827"	"0.13"	"0.00010"	"6/104"	"6"	"104"	"311425.279785156"	"HCD"	"MS2"	"28.12328"	"22.3"	"100.000"	"88.0157"	"30722"	"30722"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"25.3"	""	"31.1"	""	"35.1"	""	"47.3"	"45.7"	""	"761"	"16"	"35.000"	"28.000"	"0.92758701638931"	"21"	"0.001217"	"0.009306"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"742.88300"	"1484.75871"	"1484.75827"	"0.30"	"0.00022"	"13/104"	"13"	"104"	"326895.807617188"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"89.0115"	"31124"	"31124"	"31105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.0"	""	"26.0"	""	"23.4"	""	"27.0"	""	"25.7"	"28.5"	""	"761"	"58"	"35.000"	"28.000"	"6.31472818279991E-05"	"23"	"0"	"2.259E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYGVIFANGER"	"[K].eYGVIFAnGER.[W]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"742.88348"	"1484.75969"	"1484.75827"	"0.95"	"0.00071"	"7/104"	"7"	"104"	"398280.49432373"	"HCD"	"MS2"	"9.204498"	"20.3"	"100.000"	"88.9019"	"31119"	"31119"	"31100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"27.5"	""	"30.0"	""	"27.9"	""	"35.1"	"36.5"	""	"760"	"40"	"35.000"	"28.000"	"0.00345767043600256"	"17"	"0"	"7.879E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"495.61618"	"1484.83399"	"1484.83608"	"-1.41"	"-0.00070"	"9/86"	"9"	"86"	"4991467.83062744"	"HCD"	"MS2"	"44.40971"	"154.2"	"100.000"	"59.1223"	"19059"	"19059"	"19045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.6"	""	"223.2"	""	"227.1"	""	"264.9"	""	"242.7"	"239.5"	""	"782"	"33"	"35.000"	"28.000"	"0.0178721482139416"	"28"	"0"	"0.0003081"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"495.61621"	"1484.83408"	"1484.83608"	"-1.35"	"-0.00067"	"8/86"	"8"	"86"	"581317.58770752"	"HCD"	"MS2"	"46.11893"	"27.7"	"100.000"	"59.9579"	"19365"	"19365"	"19337"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"28.1"	""	"39.6"	""	"49.6"	""	"54.3"	"52.8"	""	"782"	"22"	"35.000"	"28.000"	"0.239429003164386"	"24"	"9.9E-05"	"0.0009604"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"495.61630"	"1484.83435"	"1484.83608"	"-1.16"	"-0.00058"	"7/86"	"7"	"86"	"5297268.98547363"	"HCD"	"MS2"	"49.23074"	"162.4"	"100.000"	"59.6151"	"19225"	"19225"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"264.7"	""	"228.1"	""	"251.4"	""	"248.0"	"0.5"	"255.8"	"286.5"	""	"782"	"30"	"35.000"	"28.000"	"0.04010299031643"	"21"	"0"	"0.0002383"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.6765"	"0.0000"	"1"	"1"	"1"	"495.61630"	"1484.83435"	"1484.83608"	"-1.16"	"-0.00058"	"11/86"	"11"	"86"	"4953843.31286621"	"HCD"	"MS2"	"48.88472"	"146.6"	"100.000"	"59.3112"	"19101"	"19101"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.2"	""	"205.4"	""	"223.5"	""	"247.7"	""	"232.5"	"240.2"	""	"782"	"34"	"35.000"	"28.000"	"0.0149340209898458"	"25"	"0"	"6.226E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.6562"	"0.0000"	"1"	"1"	"1"	"495.61630"	"1484.83435"	"1484.83608"	"-1.16"	"-0.00058"	"7/86"	"7"	"86"	"5896553.35192871"	"HCD"	"MS2"	"42.23191"	"177.9"	"100.000"	"59.4101"	"19177"	"19177"	"19161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"291.3"	""	"236.0"	""	"270.8"	""	"287.2"	"1.1"	"293.2"	"302.9"	""	"782"	"32"	"35.000"	"28.000"	"0.0254200708924148"	"25"	"0"	"0.0001407"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"742.92120"	"1484.83513"	"1484.83608"	"-0.64"	"-0.00047"	"15/86"	"15"	"86"	"2158958.66668701"	"HCD"	"MS2"	"0"	"165.8"	"100.000"	"59.2514"	"19077"	"19077"	"19054"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"286.1"	""	"222.5"	""	"234.7"	""	"293.2"	"1.7"	"266.4"	"262.5"	""	"788"	"55"	"35.000"	"28.000"	"0.000112848612014319"	"24"	"0"	"5.413E-06"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"742.92133"	"1484.83537"	"1484.83608"	"-0.47"	"-0.00035"	"15/86"	"15"	"86"	"6959705.05432129"	"HCD"	"MS2"	"0"	"484.5"	"100.000"	"59.2718"	"19120"	"19120"	"19104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"852.4"	""	"627.9"	""	"703.2"	""	"819.9"	""	"772.9"	"805.0"	""	"788"	"54"	"35.000"	"28.000"	"0.000167300108194847"	"25"	"0"	"4.735E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"742.92151"	"1484.83574"	"1484.83608"	"-0.23"	"-0.00017"	"9/86"	"9"	"86"	"375656.707641602"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"59.9074"	"19344"	"19344"	"19321"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"43.6"	""	"51.1"	""	"51.9"	"0.2"	"62.7"	"63.8"	""	"770"	"53"	"35.000"	"28.000"	"0.000188564845456852"	"26"	"0"	"4.22E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"742.92169"	"1484.83611"	"1484.83608"	"0.02"	"0.00001"	"15/86"	"15"	"86"	"1878335.95532227"	"HCD"	"MS2"	"0"	"149.5"	"100.000"	"59.5505"	"19232"	"19232"	"19217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"258.0"	""	"191.7"	""	"221.3"	""	"237.4"	""	"232.6"	"273.7"	""	"772"	"54"	"35.000"	"28.000"	"0.000168495111244704"	"24"	"0"	"1.526E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"742.92175"	"1484.83623"	"1484.83608"	"0.10"	"0.00007"	"15/86"	"15"	"86"	"679170.486083984"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"58.9635"	"18995"	"18995"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.4"	""	"80.5"	""	"93.9"	""	"106.5"	"1.6"	"85.0"	"83.4"	""	"774"	"57"	"35.000"	"28.000"	"7.44236499088232E-05"	""	"0"	"3.646E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"742.92175"	"1484.83623"	"1484.83608"	"0.10"	"0.00007"	"15/86"	"15"	"86"	"5667982.50958252"	"HCD"	"MS2"	"0"	"433.7"	"100.000"	"59.5667"	"19206"	"19206"	"19189"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"703.7"	""	"568.0"	""	"666.4"	""	"720.5"	""	"706.1"	"742.1"	""	"774"	"54"	"35.000"	"28.000"	"0.000169711380038919"	"24"	"0"	"9.169E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSAAEAISK"	"[K].ySSAAEAISk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"742.92297"	"1484.83867"	"1484.83608"	"1.74"	"0.00130"	"9/86"	"9"	"86"	"186659.305847168"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"59.9118"	"19379"	"19379"	"19353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"20.1"	""	"25.4"	""	"31.5"	""	"28.0"	"34.1"	""	"796"	"24"	"35.000"	"29.000"	"0.162885742572544"	"19"	"0.008135"	"0.1038"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEPGSPAEK"	"[R].lVEPGSPAEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"742.93872"	"1484.87016"	"1484.87247"	"-1.55"	"-0.00115"	"8/84"	"8"	"84"	"408659.691650391"	"HCD"	"MS2"	"7.504122"	"38.5"	"100.000"	"57.7967"	"18519"	"18519"	"18498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"33.9"	""	"45.3"	""	"60.2"	""	"97.2"	"93.9"	""	"646"	"37"	"35.000"	"28.000"	"0.006126360125512"	"26"	"0.0001991"	"0.003229"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEPGSPAEK"	"[R].lVEPGSPAEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"742.93945"	"1484.87163"	"1484.87247"	"-0.56"	"-0.00042"	"8/84"	"8"	"84"	"632095.299621582"	"HCD"	"MS2"	"13.07523"	"51.3"	"100.000"	"58.0063"	"18569"	"18569"	"18550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"47.8"	""	"53.7"	""	"91.1"	"1.2"	"118.1"	"119.6"	""	"641"	"48"	"35.000"	"28.000"	"0.000466474635326521"	""	"0"	"2.392E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEPGSPAEK"	"[R].lVEPGSPAEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.6389"	"0.0000"	"1"	"1"	"1"	"742.93945"	"1484.87163"	"1484.87247"	"-0.56"	"-0.00042"	"7/84"	"7"	"84"	"1121218.01757813"	"HCD"	"MS2"	"35.45092"	"85.7"	"100.000"	"57.7025"	"18445"	"18445"	"18423"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.9"	""	"107.2"	""	"106.7"	""	"138.3"	""	"164.4"	"166.7"	""	"641"	"36"	"35.000"	"28.000"	"0.008586734481045"	"28"	"0"	"0.0002373"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVEPGSPAEK"	"[R].lVEPGSPAEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"Q9JJ19"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus norvegicus OX=10116 GN=Slc9a3r1 PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"742.93970"	"1484.87212"	"1484.87247"	"-0.23"	"-0.00017"	"8/84"	"8"	"84"	"1405893.28668213"	"HCD"	"MS2"	"28.40464"	"103.4"	"100.000"	"57.4813"	"18390"	"18390"	"18372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.2"	""	"126.9"	""	"128.0"	""	"177.8"	""	"200.2"	"200.9"	""	"619"	"48"	"34.000"	"27.000"	"0.000504267122101994"	"24"	"0"	"9.813E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.37817"	"1485.74907"	"1485.75352"	"-3.00"	"-0.00223"	"7/104"	"7"	"104"	"500315.213378906"	"HCD"	"MS2"	"13.96603"	"31.9"	"100.000"	"58.4571"	"18789"	"18789"	"18763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"32.3"	""	"38.7"	""	"55.6"	"1.4"	"74.1"	"60.7"	""	"581"	"32"	"34.000"	"27.000"	"0.0178708881522217"	"15"	"0.0001686"	"0.001236"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"743.37854"	"1485.74980"	"1485.75352"	"-2.50"	"-0.00186"	"7/104"	"7"	"104"	"590243.798034668"	"HCD"	"MS2"	"24.83991"	"38.6"	"100.000"	"58.7610"	"18877"	"18877"	"18855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"46.8"	""	"49.1"	""	"64.1"	""	"68.0"	"78.0"	""	"593"	"30"	"34.000"	"27.000"	"0.0323612059757056"	"16"	"9.9E-05"	"0.000743"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"743.37933"	"1485.75139"	"1485.75352"	"-1.44"	"-0.00107"	"8/96"	"8"	"96"	"387834.615661621"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"83.8892"	"29066"	"29066"	"29049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"27.2"	""	"34.2"	""	"51.0"	"0.2"	"50.8"	"53.1"	""	"611"	"32"	"34.000"	"27.000"	"0.0197702069111192"	"25"	"0"	"0.0002741"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"495.92209"	"1485.75171"	"1485.75352"	"-1.22"	"-0.00060"	"10/96"	"10"	"96"	"685723.072937012"	"HCD"	"MS2"	"66.23375"	"13.7"	"100.000"	"84.6845"	"29417"	"29417"	"29393"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"15.4"	""	"19.0"	""	"18.0"	""	"28.4"	"33.6"	""	"605"	"34"	"34.000"	"27.000"	"0.0119323333877772"	"22"	"0"	"0.0001772"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"495.92218"	"1485.75199"	"1485.75352"	"-1.03"	"-0.00051"	"11/96"	"11"	"96"	"1724219.23114014"	"HCD"	"MS2"	"45.28634"	"23.4"	"100.000"	"84.1037"	"29153"	"29153"	"29131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"26.1"	""	"32.6"	""	"40.1"	"2.4"	"43.2"	"47.9"	""	"605"	"51"	"34.000"	"27.000"	"0.000251029857173113"	"27"	"0"	"3.201E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.37976"	"1485.75224"	"1485.75352"	"-0.86"	"-0.00064"	"7/104"	"7"	"104"	"367687.454467773"	"HCD"	"MS2"	"16.25399"	"23.6"	"100.000"	"58.7564"	"18911"	"18911"	"18887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"30.7"	""	"27.0"	""	"36.2"	"1.1"	"46.9"	"48.7"	""	"605"	"35"	"34.000"	"27.000"	"0.0094129419197457"	"15"	"9.9E-05"	"0.0004294"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASFNTDPYVR"	"[R].sASFNTDPYVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.37976"	"1485.75224"	"1485.75352"	"-0.86"	"-0.00064"	"5/104"	"5"	"104"	"311803.635070801"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"59.0603"	"18999"	"18999"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.0"	""	"28.4"	""	"32.8"	"1.8"	"39.2"	""	"40.5"	"43.0"	""	"605"	"18"	"34.000"	"27.000"	"0.528111201258452"	"14"	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"495.92230"	"1485.75235"	"1485.75352"	"-0.79"	"-0.00039"	"11/96"	"11"	"96"	"1263738.46569824"	"HCD"	"MS2"	"42.60115"	"20.3"	"100.000"	"84.0568"	"29163"	"29163"	"29140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.3"	""	"20.8"	""	"28.7"	""	"34.1"	"1.9"	"38.2"	"37.9"	""	"629"	"42"	"34.000"	"27.000"	"0.00185191329609333"	"23"	"0"	"0.0002675"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"743.37994"	"1485.75261"	"1485.75352"	"-0.61"	"-0.00046"	"8/96"	"8"	"96"	"552243.811218262"	"HCD"	"MS2"	"6.541878"	"36.2"	"100.000"	"83.9462"	"29118"	"29118"	"29100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.8"	""	"36.0"	""	"38.2"	""	"67.0"	"3.1"	"78.4"	"75.3"	""	"628"	"41"	"34.000"	"27.000"	"0.00239844436043395"	"26"	"0"	"0.0001368"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"495.92252"	"1485.75299"	"1485.75352"	"-0.36"	"-0.00018"	"13/96"	"13"	"96"	"2469382.54980469"	"HCD"	"MS2"	"14.82447"	"25.0"	"100.000"	"84.3829"	"29266"	"29266"	"29251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"27.8"	""	"30.7"	""	"46.7"	"0.2"	"52.3"	"51.4"	""	"627"	"51"	"34.000"	"27.000"	"0.000255998573420918"	"26"	"0"	"4.175E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8163"	"0.0000"	"1"	"1"	"1"	"495.92252"	"1485.75299"	"1485.75352"	"-0.36"	"-0.00018"	"13/96"	"13"	"96"	"2661008.40081787"	"HCD"	"MS2"	"14.63987"	"25.0"	"100.000"	"84.3614"	"29286"	"29286"	"29267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	""	"21.9"	""	"33.9"	""	"43.6"	""	"56.3"	"54.5"	""	"627"	"49"	"34.000"	"27.000"	"0.000362441187927223"	"25"	"0"	"0.0001399"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"743.38025"	"1485.75322"	"1485.75352"	"-0.20"	"-0.00015"	"8/96"	"8"	"96"	"408996.399597168"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"84.7524"	"29414"	"29414"	"29406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"32.6"	""	"32.1"	""	"55.2"	""	"47.2"	"58.6"	""	"626"	"35"	"34.000"	"27.000"	"0.0107781528328925"	"24"	"0"	"0.0003375"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"743.38025"	"1485.75322"	"1485.75352"	"-0.20"	"-0.00015"	"10/96"	"10"	"96"	"3041878.63739014"	"HCD"	"MS2"	"0"	"146.9"	"100.000"	"84.4730"	"29303"	"29303"	"29291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"167.9"	""	"141.8"	""	"166.1"	""	"284.2"	"3.4"	"301.8"	"330.9"	""	"626"	"56"	"34.000"	"27.000"	"8.08247439668628E-05"	"26"	"0"	"8.073E-07"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"743.38031"	"1485.75334"	"1485.75352"	"-0.12"	"-0.00009"	"9/96"	"9"	"96"	"2641829.25939941"	"HCD"	"MS2"	"0"	"133.2"	"100.000"	"84.5232"	"29352"	"29352"	"29335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"152.5"	""	"128.6"	""	"164.0"	""	"238.5"	""	"290.1"	"292.8"	""	"626"	"54"	"34.000"	"27.000"	"0.000127216762028712"	"26"	"0"	"4.029E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"743.38037"	"1485.75347"	"1485.75352"	"-0.04"	"-0.00003"	"5/96"	"5"	"96"	"314772.608337402"	"HCD"	"MS2"	"7.175929"	"21.5"	"100.000"	"84.8070"	"29466"	"29466"	"29449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"22.9"	""	"27.3"	""	"40.5"	"0.5"	"45.3"	"43.9"	""	"626"	"29"	"34.000"	"27.000"	"0.0393137378636496"	"24"	"0"	"0.0003228"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"743.38055"	"1485.75383"	"1485.75352"	"0.21"	"0.00015"	"9/96"	"9"	"96"	"4215873.54205322"	"HCD"	"MS2"	"0"	"213.7"	"100.000"	"84.2054"	"29195"	"29195"	"29178"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"262.1"	""	"203.1"	""	"253.7"	""	"412.2"	"0.1"	"442.1"	"456.2"	""	"627"	"56"	"34.000"	"27.000"	"8.69435852808351E-05"	"26"	"0"	"9.28E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEFATGNDR"	"[R].yLAEFATGNDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7963"	"0.0000"	"1"	"1"	"1"	"743.38068"	"1485.75408"	"1485.75352"	"0.37"	"0.00028"	"9/96"	"9"	"96"	"4220711.24316406"	"HCD"	"MS2"	"0.6359352"	"206.1"	"100.000"	"84.2372"	"29236"	"29236"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"238.2"	""	"191.3"	""	"253.7"	""	"381.1"	"3.1"	"436.3"	"455.0"	""	"629"	"54"	"34.000"	"27.000"	"0.000127239117938846"	"26"	"0"	"1.127E-06"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSNTYTLTDVR"	"[R].sSNTYTLTDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"743.39105"	"1485.77483"	"1485.77465"	"0.12"	"0.00009"	"8/112"	"8"	"112"	"1472969.87182617"	"HCD"	"MS2"	"1.910315"	"73.9"	"100.000"	"50.5369"	"15573"	"15573"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.6"	""	"85.0"	""	"104.3"	""	"119.7"	"0.7"	"135.9"	"152.0"	""	"730"	"72"	"35.000"	"28.000"	"2.36207054748233E-06"	"20"	"0"	"4.608E-07"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSNTYTLTDVR"	"[R].sSNTYTLTDVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"743.39130"	"1485.77532"	"1485.77465"	"0.45"	"0.00033"	"12/112"	"12"	"112"	"1888204.47747803"	"HCD"	"MS2"	"0"	"88.5"	"100.000"	"50.8232"	"15655"	"15655"	"15637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.0"	""	"114.1"	""	"128.0"	""	"145.0"	"5.2"	"161.3"	"169.3"	""	"730"	"70"	"35.000"	"28.000"	"3.69226500804862E-06"	"25"	"0"	"1.743E-07"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGVVSDYEK"	"[R].mGVVSDYEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"743.40393"	"1485.80058"	"1485.80234"	"-1.18"	"-0.00088"	"5/70"	"5"	"70"	"202732.46862793"	"HCD"	"MS2"	"0"	"23.9"	"100.000"	"72.7858"	"24597"	"24597"	"24568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.0"	""	"33.5"	""	"34.3"	""	"34.7"	""	"46.4"	"41.4"	""	"759"	"21"	"35.000"	"28.000"	"0.318575064884111"	"28"	"0.002834"	"0.03043"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGVVSDYEK"	"[R].mGVVSDYEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"743.40430"	"1485.80132"	"1485.80234"	"-0.69"	"-0.00051"	"7/70"	"7"	"70"	"263174.292724609"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"72.7430"	"24550"	"24550"	"24523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.2"	""	"36.2"	""	"33.6"	""	"26.0"	"1.0"	"48.4"	"52.0"	""	"764"	"22"	"35.000"	"28.000"	"0.242138229700146"	""	"0.0001991"	"0.002555"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLEELNLGPR"	"[R].tDLEELNLGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"743.40656"	"1485.80583"	"1485.81104"	"-3.50"	"-0.00260"	"8/96"	"8"	"96"	"828255.541320801"	"HCD"	"MS2"	"30.16006"	"52.4"	"100.000"	"94.1314"	"33187"	"33187"	"33163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"59.1"	""	"72.7"	""	"96.4"	""	"112.2"	"94.5"	""	"793"	"35"	"35.000"	"28.000"	"0.011974108571394"	"18"	"0"	"4.672E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLEELNLGPR"	"[R].tDLEELNLGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"743.40710"	"1485.80693"	"1485.81104"	"-2.76"	"-0.00205"	"8/96"	"8"	"96"	"787208.885986328"	"HCD"	"MS2"	"30.93384"	"48.2"	"100.000"	"94.0525"	"33190"	"33190"	"33174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.6"	""	"59.2"	""	"65.6"	""	"82.4"	""	"87.7"	"102.1"	""	"802"	"31"	"36.000"	"29.000"	"0.0291839701619266"	"16"	"9.9E-05"	"0.0006484"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLEELNLGPR"	"[R].tDLEELNLGPR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"495.94125"	"1485.80921"	"1485.81104"	"-1.23"	"-0.00061"	"13/96"	"13"	"96"	"756402.778869629"	"HCD"	"MS2"	"56.64527"	"21.7"	"100.000"	"94.2123"	"33220"	"33220"	"33195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"30.6"	""	"26.1"	""	"30.4"	"0.6"	"46.6"	"45.4"	""	"817"	"26"	"36.000"	"29.000"	"0.112251476154233"	"20"	"9.9E-05"	"0.0006399"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIEESTASK"	"[K].yIEESTASk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"743.41364"	"1485.81999"	"1485.82010"	"-0.07"	"-0.00005"	"8/74"	"8"	"74"	"212840.6171875"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"47.5333"	"14316"	"14316"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"36.8"	""	"32.8"	""	"33.6"	""	"43.4"	"41.4"	""	"794"	"41"	"35.000"	"28.000"	"0.00349776402584182"	"22"	"0"	"8.832E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIEESTASK"	"[K].yIEESTASk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"743.41486"	"1485.82244"	"1485.82010"	"1.57"	"0.00117"	"7/74"	"7"	"74"	"250781.718322754"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"47.2848"	"14253"	"14253"	"14225"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"32.2"	""	"33.9"	""	"36.2"	""	"57.6"	"50.2"	""	"814"	"27"	"36.000"	"29.000"	"0.0747471105742776"	"15"	"0.001453"	"0.01172"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"743.41602"	"1485.82475"	"1485.82629"	"-1.04"	"-0.00077"	"9/96"	"9"	"96"	"1800161.29797363"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"94.7241"	"33428"	"33428"	"33418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.4"	""	"100.5"	""	"104.0"	""	"129.8"	"0.8"	"136.4"	"143.6"	""	"807"	"55"	"36.000"	"29.000"	"0.000115835996484696"	"22"	"0"	"2.239E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"743.41620"	"1485.82512"	"1485.82629"	"-0.79"	"-0.00059"	"8/96"	"8"	"96"	"2157206.70623779"	"HCD"	"MS2"	"1.773472"	"89.5"	"100.000"	"94.6613"	"33437"	"33437"	"33423"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"121.2"	""	"131.5"	""	"140.5"	""	"119.6"	"0.5"	"161.9"	"172.8"	""	"806"	"44"	"36.000"	"29.000"	"0.00163796661653581"	"21"	"0"	"5.275E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"495.94702"	"1485.82651"	"1485.82629"	"0.15"	"0.00007"	"10/96"	"10"	"96"	"875304.60168457"	"HCD"	"MS2"	"18.44706"	"16.6"	"100.000"	"94.5076"	"33340"	"33340"	"33319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"19.0"	""	"23.9"	""	"26.7"	""	"37.8"	"31.6"	""	"802"	"39"	"36.000"	"29.000"	"0.00533512221609215"	"23"	"0"	"4.076E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"743.41718"	"1485.82707"	"1485.82629"	"0.52"	"0.00039"	"6/96"	"6"	"96"	"168482.738037109"	"HCD"	"MS2"	"8.581962"	"9.9"	"100.000"	"94.9495"	"33552"	"33552"	"33536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"13.5"	""	"12.5"	""	"20.2"	""	"19.3"	"16.3"	""	"795"	"16"	"35.000"	"29.000"	"1.04312687099532"	"21"	"0.002711"	"0.02825"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"495.94742"	"1485.82770"	"1485.82629"	"0.95"	"0.00047"	"7/96"	"7"	"96"	"699826.606689453"	"HCD"	"MS2"	"26.53953"	"15.1"	"100.000"	"94.4561"	"33355"	"33355"	"33326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"24.5"	""	"18.7"	""	"21.4"	""	"28.5"	"25.7"	""	"800"	"42"	"36.000"	"29.000"	"0.00246070749083947"	"24"	"0"	"4.644E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"743.41785"	"1485.82842"	"1485.82629"	"1.43"	"0.00106"	"7/96"	"7"	"96"	"755441.33605957"	"HCD"	"MS2"	"26.34614"	"42.4"	"100.000"	"94.4291"	"33308"	"33308"	"33287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.7"	""	"55.9"	""	"54.4"	""	"71.7"	""	"80.8"	"83.7"	""	"806"	"31"	"36.000"	"29.000"	"0.0302904026289337"	"21"	"0.0001991"	"0.005809"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEIPEQFGPIR"	"[K].aEIPEQFGPIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"743.41797"	"1485.82866"	"1485.82629"	"1.59"	"0.00118"	"8/96"	"8"	"96"	"575031.476074219"	"HCD"	"MS2"	"27.74237"	"34.8"	"100.000"	"94.3662"	"33318"	"33318"	"33294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.9"	""	"48.0"	""	"48.4"	""	"57.3"	""	"68.0"	"63.9"	""	"800"	"41"	"36.000"	"29.000"	"0.00310498846651477"	"22"	"0"	"0.0002295"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAELGSPVK"	"[K].qVAELGSPVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"743.45563"	"1485.90398"	"1485.90410"	"-0.08"	"-0.00006"	"5/96"	"5"	"96"	"332478.413696289"	"HCD"	"MS2"	"36.86177"	"28.0"	"100.000"	"65.9953"	"21816"	"21816"	"21785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"37.6"	""	"40.7"	""	"46.2"	""	"59.7"	"50.3"	""	"502"	"22"	"33.000"	"27.000"	"0.149855856932543"	"21"	"9.9E-05"	"0.0009389"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVAELGSPVK"	"[K].qVAELGSPVk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"P35446"	"Spondin-1 OS=Rattus norvegicus OX=10116 GN=Spon1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"743.45612"	"1485.90495"	"1485.90410"	"0.58"	"0.00043"	"8/96"	"8"	"96"	"393703.971496582"	"HCD"	"MS2"	"49.34992"	"30.3"	"100.000"	"65.9321"	"21823"	"21823"	"21798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"42.1"	""	"42.9"	""	"47.4"	"0.4"	"55.3"	"51.4"	""	"500"	"49"	"33.000"	"26.000"	"0.000299874825787345"	""	"0"	"6.348E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"496.26883"	"1486.79193"	"1486.79505"	"-2.10"	"-0.00104"	"9/94"	"9"	"94"	"350121.726257324"	"HCD"	"MS2"	"43.76321"	"9.3"	"100.000"	"93.3027"	"32851"	"32851"	"32829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.6"	""	"12.1"	""	"12.9"	""	"16.6"	""	"19.8"	"18.8"	""	"793"	"23"	"35.000"	"28.000"	"0.213423968767708"	"19"	"0.0001991"	"0.002025"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"743.90027"	"1486.79326"	"1486.79505"	"-1.21"	"-0.00090"	"9/94"	"9"	"94"	"511104.831481934"	"HCD"	"MS2"	"13.09015"	"28.2"	"100.000"	"93.1909"	"32806"	"32806"	"32783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"26.1"	""	"29.0"	""	"55.2"	"2.5"	"62.7"	"69.4"	""	"800"	"62"	"36.000"	"29.000"	"2.56483830634065E-05"	"28"	"0"	"7.359E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"496.26947"	"1486.79386"	"1486.79505"	"-0.80"	"-0.00040"	"8/94"	"8"	"94"	"405197.287414551"	"HCD"	"MS2"	"54.70461"	"10.5"	"100.000"	"93.2358"	"32861"	"32861"	"32832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"14.7"	""	"9.6"	""	"17.8"	""	"21.1"	"22.4"	""	"800"	"28"	"36.000"	"29.000"	"0.0668436245724283"	"19"	"0"	"0.0001618"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"743.90125"	"1486.79521"	"1486.79505"	"0.11"	"0.00008"	"8/94"	"8"	"94"	"884056.586303711"	"HCD"	"MS2"	"1.460805"	"42.1"	"100.000"	"93.4406"	"32942"	"32942"	"32926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"38.1"	""	"37.1"	""	"76.7"	"1.9"	"109.1"	"99.1"	""	"797"	"72"	"36.000"	"29.000"	"2.54934331939835E-06"	"25"	"0"	"1.949E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"743.90161"	"1486.79595"	"1486.79505"	"0.60"	"0.00045"	"9/94"	"9"	"94"	"1142610.9465332"	"HCD"	"MS2"	"0"	"52.2"	"100.000"	"93.4896"	"32926"	"32926"	"32908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.5"	""	"43.4"	""	"52.8"	""	"98.8"	"1.5"	"132.1"	"126.1"	""	"791"	"64"	"35.000"	"28.000"	"1.43267105873804E-05"	""	"0"	"4.131E-06"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDLISEGEEPR"	"[K].lDLISEGEEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"O54698"	"Equilibrative nucleoside transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc29a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"743.90179"	"1486.79631"	"1486.79505"	"0.85"	"0.00063"	"9/94"	"9"	"94"	"626082.163269043"	"HCD"	"MS2"	"16.53604"	"32.0"	"100.000"	"93.1409"	"32822"	"32822"	"32800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.1"	""	"32.1"	""	"31.5"	""	"64.8"	"0.8"	"70.5"	"74.9"	""	"791"	"67"	"35.000"	"28.000"	"8.85414210303778E-06"	"24"	"0"	"1.924E-06"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36432"	"1487.72136"	"1487.72155"	"-0.13"	"-0.00010"	"6/84"	"6"	"84"	"795677.27154541"	"HCD"	"MS2"	"20.23727"	"52.2"	"100.000"	"62.8877"	"20585"	"20585"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.0"	""	"48.2"	""	"57.0"	""	"86.2"	"0.6"	"115.3"	"119.1"	""	"436"	"37"	"33.000"	"26.000"	"0.00405934995792505"	"15"	"0"	"9.461E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36444"	"1487.72161"	"1487.72155"	"0.03"	"0.00003"	"5/84"	"5"	"84"	"783957.079589844"	"HCD"	"MS2"	"31.57467"	"49.4"	"100.000"	"62.9587"	"20581"	"20581"	"20561"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.2"	""	"60.0"	""	"58.7"	""	"80.3"	"1.8"	"102.0"	"103.2"	""	"436"	"24"	"33.000"	"26.000"	"0.0836481795173167"	"14"	"9.9E-05"	"0.0005111"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36450"	"1487.72173"	"1487.72155"	"0.12"	"0.00009"	"6/84"	"6"	"84"	"838059.654663086"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"62.5906"	"20465"	"20465"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.1"	""	"59.2"	""	"64.1"	""	"87.0"	"0.3"	"100.6"	"107.8"	""	"438"	"40"	"33.000"	"26.000"	"0.00206273821638502"	"15"	"0"	"3.104E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDPTIEDSYR"	"[K].yDPTIEDSYR.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"P62836"	"Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"Q62636; P62836"	"Ras-related protein Rap-1b OS=Rattus norvegicus OX=10116 GN=Rap1b PE=1 SV=2; Ras-related protein Rap-1A OS=Rattus norvegicus OX=10116 GN=Rap1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"744.36487"	"1487.72246"	"1487.72155"	"0.61"	"0.00045"	"8/84"	"8"	"84"	"759610.080993652"	"HCD"	"MS2"	"13.85217"	"46.3"	"100.000"	"62.6406"	"20452"	"20452"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.6"	""	"57.9"	""	"50.1"	""	"81.8"	""	"92.2"	"98.5"	""	"437"	"38"	"33.000"	"26.000"	"0.00384106309649975"	"15"	"0"	"3.133E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"496.58209"	"1487.73172"	"1487.73279"	"-0.72"	"-0.00035"	"14/104"	"14"	"104"	"1566368.81860352"	"HCD"	"MS2"	"26.8043"	"21.4"	"100.000"	"80.4164"	"27663"	"27663"	"27644"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"23.0"	""	"31.4"	""	"33.3"	""	"41.2"	"48.1"	""	"491"	"49"	"33.000"	"26.000"	"0.000285792940220275"	"17"	"0"	"4.813E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"496.58215"	"1487.73191"	"1487.73279"	"-0.59"	"-0.00029"	"14/104"	"14"	"104"	"2448895.80151367"	"HCD"	"MS2"	"32.6666"	"30.5"	"100.000"	"79.9400"	"27497"	"27497"	"27477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"34.3"	""	"36.4"	""	"55.0"	""	"60.9"	"63.1"	""	"490"	"44"	"33.000"	"26.000"	"0.000883417675403024"	"18"	"0"	"5.649E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"496.58221"	"1487.73209"	"1487.73279"	"-0.47"	"-0.00023"	"12/104"	"12"	"104"	"1878268.71606445"	"HCD"	"MS2"	"45.16135"	"25.0"	"100.000"	"79.8296"	"27425"	"27425"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.1"	""	"32.1"	""	"33.4"	""	"42.6"	"0.2"	"49.8"	"47.4"	""	"490"	"48"	"33.000"	"26.000"	"0.000354949104118467"	"24"	"0"	"2.189E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"744.36987"	"1487.73247"	"1487.73279"	"-0.21"	"-0.00016"	"10/104"	"10"	"104"	"477156.598510742"	"HCD"	"MS2"	"3.686836"	"32.8"	"100.000"	"80.9442"	"27905"	"27905"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.3"	""	"44.4"	""	"43.7"	""	"63.3"	"1.5"	"58.7"	"62.5"	""	"497"	"60"	"33.000"	"26.000"	"2.71848157018615E-05"	"18"	"0"	"5.26E-07"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"496.58237"	"1487.73255"	"1487.73279"	"-0.16"	"-0.00008"	"15/104"	"15"	"104"	"5844902.31665039"	"HCD"	"MS2"	"8.37181"	"58.8"	"100.000"	"80.2184"	"27611"	"27611"	"27600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.9"	""	"78.1"	""	"93.0"	""	"93.8"	""	"106.1"	"117.7"	""	"497"	"66"	"33.000"	"26.000"	"5.93371103803925E-06"	"20"	"0"	"3.015E-06"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9825"	"0.0000"	"1"	"1"	"1"	"744.36993"	"1487.73259"	"1487.73279"	"-0.13"	"-0.00010"	"10/104"	"10"	"104"	"27046453.8164063"	"HCD"	"MS2"	"0"	"413.2"	"33.043"	"80.0411"	"27539"	"27539"	"27524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"547.7"	""	"531.4"	""	"618.0"	""	"726.3"	"1.8"	"697.6"	"790.5"	""	"497"	"57"	"33.000"	"26.000"	"5.25202026399407E-05"	"17"	"0"	"1.643E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9841"	"0.0000"	"1"	"1"	"1"	"496.58243"	"1487.73273"	"1487.73279"	"-0.04"	"-0.00002"	"15/104"	"15"	"104"	"5536249.49133301"	"HCD"	"MS2"	"10.78211"	"51.2"	"100.000"	"80.1195"	"27543"	"27543"	"27525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"62.4"	""	"76.9"	""	"89.4"	"0.3"	"89.4"	"95.3"	""	"497"	"63"	"33.000"	"26.000"	"1.12804491737576E-05"	"18"	"0"	"5.572E-07"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"744.37006"	"1487.73284"	"1487.73279"	"0.03"	"0.00002"	"10/104"	"10"	"104"	"573752.644958496"	"HCD"	"MS2"	"30.34681"	"45.4"	"100.000"	"81.2556"	"28031"	"28031"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.1"	""	"58.2"	""	"55.2"	""	"71.7"	""	"88.3"	"88.0"	""	"497"	"40"	"33.000"	"26.000"	"0.00243964363840466"	"20"	"0"	"9.86E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"744.37006"	"1487.73284"	"1487.73279"	"0.03"	"0.00002"	"16/104"	"16"	"104"	"909824.524230957"	"HCD"	"MS2"	"9.397564"	"56.4"	"100.000"	"79.7554"	"27422"	"27422"	"27398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.0"	""	"67.5"	""	"86.6"	""	"98.5"	"1.1"	"102.9"	"102.8"	""	"497"	"65"	"33.000"	"26.000"	"8.42027728005917E-06"	"23"	"0"	"3.207E-08"	"1.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"496.58249"	"1487.73291"	"1487.73279"	"0.08"	"0.00004"	"14/104"	"14"	"104"	"1134073.03845215"	"HCD"	"MS2"	"41.27528"	"19.2"	"100.000"	"80.5295"	"27736"	"27736"	"27716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"25.7"	""	"27.2"	""	"29.7"	""	"37.3"	"34.0"	""	"498"	"43"	"33.000"	"26.000"	"0.00129777483065165"	"16"	"0"	"1.257E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"744.37012"	"1487.73296"	"1487.73279"	"0.11"	"0.00008"	"7/104"	"7"	"104"	"2807508.44134521"	"HCD"	"MS2"	"0"	"144.1"	"100.000"	"80.5984"	"27765"	"27765"	"27748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.5"	""	"189.3"	""	"222.6"	""	"248.1"	""	"244.8"	"275.8"	""	"498"	"60"	"33.000"	"26.000"	"2.79382595121189E-05"	"17"	"0"	"4.135E-07"	"1.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9861"	"0.0000"	"1"	"1"	"1"	"744.37018"	"1487.73308"	"1487.73279"	"0.20"	"0.00015"	"8/104"	"8"	"104"	"2796794.31976318"	"HCD"	"MS2"	"0"	"147.9"	"100.000"	"80.5203"	"27706"	"27706"	"27689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.8"	""	"193.0"	""	"216.4"	""	"249.8"	""	"246.6"	"299.9"	""	"501"	"72"	"33.000"	"26.000"	"1.65503708725903E-06"	"18"	"0"	"1.786E-08"	"1.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"744.37024"	"1487.73320"	"1487.73279"	"0.28"	"0.00021"	"9/104"	"9"	"104"	"605535.073303223"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"79.6404"	"27348"	"27348"	"27323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"57.8"	""	"55.8"	""	"66.5"	"1.2"	"72.8"	"74.8"	""	"501"	"58"	"33.000"	"26.000"	"4.45458992214751E-05"	"22"	"0"	"1.438E-06"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"744.37030"	"1487.73332"	"1487.73279"	"0.36"	"0.00027"	"9/104"	"9"	"104"	"666739.902709961"	"HCD"	"MS2"	"45.26645"	"53.8"	"100.000"	"81.2190"	"27989"	"27989"	"27966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.8"	""	"65.8"	""	"74.6"	""	"87.7"	"1.4"	"98.9"	"106.4"	""	"501"	"30"	"33.000"	"26.000"	"0.0269654536014274"	"18"	"0"	"0.0003678"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"744.37030"	"1487.73332"	"1487.73279"	"0.36"	"0.00027"	"7/104"	"7"	"104"	"434622.988525391"	"HCD"	"MS2"	"6.47868"	"30.0"	"100.000"	"80.9052"	"27862"	"27862"	"27843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"43.3"	""	"42.4"	""	"49.0"	"2.0"	"56.0"	"56.4"	""	"501"	"49"	"33.000"	"26.000"	"0.000337915202089209"	"21"	"0"	"2.716E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9833"	"0.0000"	"1"	"1"	"1"	"744.37054"	"1487.73381"	"1487.73279"	"0.69"	"0.00051"	"11/104"	"11"	"104"	"27392751.0234375"	"HCD"	"MS2"	"0"	"343.2"	"27.221"	"80.3081"	"27647"	"27647"	"27636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"450.4"	""	"440.6"	""	"501.2"	""	"595.8"	"1.0"	"582.8"	"679.3"	""	"510"	"60"	"34.000"	"27.000"	"2.28318015215147E-05"	"17"	"0"	"1.312E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9851"	"0.0000"	"1"	"1"	"1"	"744.37054"	"1487.73381"	"1487.73279"	"0.69"	"0.00051"	"10/104"	"10"	"104"	"19312453.8566895"	"HCD"	"MS2"	"0"	"521.2"	"58.933"	"79.9219"	"27463"	"27463"	"27446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"696.6"	""	"681.2"	""	"813.4"	""	"918.4"	"1.2"	"848.0"	"974.7"	""	"510"	"67"	"34.000"	"27.000"	"5.24252101975956E-06"	"18"	"0"	"8.171E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVTDFSGFDGR"	"[R].gTVTDFSGFDGR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"0"	"2"	"2"	"0.9828"	"0.0000"	"1"	"1"	"1"	"744.37128"	"1487.73528"	"1487.73279"	"1.67"	"0.00124"	"10/104"	"10"	"104"	"25485207.2460938"	"HCD"	"MS2"	"0"	"493.3"	"42.238"	"80.2072"	"27579"	"27579"	"27570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"636.3"	""	"627.8"	""	"736.6"	""	"833.8"	""	"857.9"	"982.6"	""	"517"	"58"	"34.000"	"27.000"	"3.96698490053617E-05"	"17"	"0"	"7.561E-07"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGYDSESK"	"[R].fPGYDSESk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"496.59750"	"1487.77796"	"1487.77823"	"-0.18"	"-0.00009"	"8/70"	"8"	"70"	"721644.673828125"	"HCD"	"MS2"	"33.4314"	"29.0"	"100.000"	"67.1409"	"22278"	"22278"	"22255"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"34.7"	""	"49.3"	""	"37.5"	"2.4"	"51.1"	"58.2"	""	"755"	"13"	"35.000"	"28.000"	"1.74548835578221"	"20"	"0.000264"	"0.006004"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGYDSESK"	"[R].fPGYDSESk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"744.39264"	"1487.77800"	"1487.77823"	"-0.15"	"-0.00011"	"8/70"	"8"	"70"	"910179.341491699"	"HCD"	"MS2"	"0"	"73.9"	"100.000"	"67.1018"	"22262"	"22262"	"22240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.8"	""	"99.7"	""	"102.4"	""	"117.7"	""	"134.3"	"132.0"	""	"753"	"38"	"35.000"	"28.000"	"0.00648283518482232"	"24"	"0.0001686"	"0.001765"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPGYDSESK"	"[R].fPGYDSESk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"P09895"	"60S ribosomal protein L5 OS=Rattus norvegicus OX=10116 GN=Rpl5 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"744.39368"	"1487.78008"	"1487.77823"	"1.24"	"0.00092"	"8/70"	"8"	"70"	"921910.327575684"	"HCD"	"MS2"	"4.178769"	"78.2"	"100.000"	"67.2157"	"22339"	"22339"	"22320"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.6"	""	"94.7"	""	"112.0"	""	"115.4"	""	"141.5"	"154.0"	""	"758"	"26"	"35.000"	"28.000"	"0.100378155253194"	"17"	"0.003317"	"0.03685"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYMDPTGK"	"[K].tTYmDPTGk.[T]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"744.39398"	"1487.78069"	"1487.78160"	"-0.61"	"-0.00046"	"5/76"	"5"	"76"	"370302.89440918"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"41.8181"	"12030"	"12030"	"12001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"29.3"	""	"27.7"	""	"50.7"	""	"33.8"	"113.5"	""	"764"	"12"	"35.000"	"28.000"	"2.2649747398956"	"14"	"0.009514"	"0.1275"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNLGENQIK"	"[K].gGNLGENQIk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.6885"	"0.0000"	"1"	"1"	"1"	"744.43207"	"1487.85686"	"1487.85821"	"-0.91"	"-0.00068"	"9/86"	"9"	"86"	"387796.886169434"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"44.3799"	"13076"	"13076"	"13053"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"28.0"	""	"34.4"	""	"79.6"	"0.6"	"83.9"	"89.7"	""	"898"	"61"	"36.000"	"29.000"	"3.4217347550141E-05"	""	"0"	"1.894E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNLGENQIK"	"[K].gGNLGENQIk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"744.43353"	"1487.85979"	"1487.85821"	"1.06"	"0.00079"	"9/86"	"9"	"86"	"374969.31072998"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"44.5607"	"13114"	"13114"	"13098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"38.9"	""	"30.5"	""	"90.2"	"0.9"	"83.9"	"79.2"	""	"888"	"47"	"36.000"	"29.000"	"0.000851888920857607"	""	"0"	"2.677E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"496.62823"	"1487.87015"	"1487.87213"	"-1.33"	"-0.00066"	"8/78"	"8"	"78"	"1019443.28637695"	"HCD"	"MS2"	"10.74871"	"34.3"	"100.000"	"92.8318"	"32661"	"32661"	"32637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"42.4"	""	"47.7"	""	"63.7"	""	"63.3"	"70.3"	""	"860"	"26"	"36.000"	"29.000"	"0.105552483374456"	"22"	"0.00212"	"0.01945"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"744.43939"	"1487.87151"	"1487.87213"	"-0.42"	"-0.00031"	"7/78"	"7"	"78"	"404546.534362793"	"HCD"	"MS2"	"28.95426"	"32.0"	"100.000"	"93.1143"	"32775"	"32775"	"32754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"30.5"	""	"31.3"	""	"54.8"	""	"67.9"	"82.8"	""	"860"	"35"	"36.000"	"29.000"	"0.0126901996746655"	"19"	"0.0008247"	"0.007589"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"496.62869"	"1487.87152"	"1487.87213"	"-0.41"	"-0.00020"	"8/78"	"8"	"78"	"9850827.87139893"	"HCD"	"MS2"	"3.497552"	"271.3"	"98.212"	"92.1513"	"32426"	"32426"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.3"	""	"313.1"	""	"396.3"	""	"514.7"	""	"460.0"	"532.2"	""	"860"	"26"	"36.000"	"29.000"	"0.112581869353416"	"21"	"0.0001991"	"0.002745"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"744.43958"	"1487.87187"	"1487.87213"	"-0.17"	"-0.00013"	"8/78"	"8"	"78"	"1995537.54980469"	"HCD"	"MS2"	"0"	"131.7"	"100.000"	"92.7784"	"32639"	"32639"	"32624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.5"	""	"144.1"	""	"180.0"	""	"242.2"	"0.3"	"240.4"	"270.8"	""	"828"	"50"	"36.000"	"29.000"	"0.000369828470265584"	"24"	"9.9E-05"	"0.0006812"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"496.62885"	"1487.87198"	"1487.87213"	"-0.10"	"-0.00005"	"8/78"	"8"	"78"	"990697.29119873"	"HCD"	"MS2"	"20.16328"	"31.2"	"100.000"	"92.7565"	"32672"	"32672"	"32648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.9"	""	"38.6"	""	"45.1"	""	"52.7"	""	"63.9"	"61.8"	""	"828"	"25"	"36.000"	"29.000"	"0.137088284293793"	"22"	"0.004819"	"0.05821"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"496.62888"	"1487.87207"	"1487.87213"	"-0.04"	"-0.00002"	"8/78"	"8"	"78"	"2688686.01153564"	"HCD"	"MS2"	"16.6478"	"84.0"	"100.000"	"91.9449"	"32306"	"32306"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.1"	""	"106.9"	""	"109.2"	""	"167.5"	"2.3"	"140.7"	"150.3"	""	"829"	"26"	"36.000"	"29.000"	"0.0940858981105844"	"21"	"0.001615"	"0.01415"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"496.62888"	"1487.87207"	"1487.87213"	"-0.04"	"-0.00002"	"8/78"	"8"	"78"	"9415180.94689941"	"HCD"	"MS2"	"3.88079"	"250.8"	"100.000"	"92.2305"	"32423"	"32423"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"321.7"	""	"309.8"	""	"365.2"	""	"488.2"	"1.6"	"424.4"	"463.8"	""	"829"	"29"	"36.000"	"29.000"	"0.0489242903477642"	"24"	"0.0001686"	"0.001037"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"744.43970"	"1487.87212"	"1487.87213"	"-0.01"	"-0.00001"	"14/78"	"14"	"78"	"405776.75567627"	"HCD"	"MS2"	"18.31525"	"30.6"	"100.000"	"92.9807"	"32757"	"32757"	"32739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"33.1"	""	"31.9"	""	"62.3"	"0.1"	"53.2"	"71.9"	""	"829"	"44"	"36.000"	"29.000"	"0.00176410542243936"	"22"	"0"	"0.0003207"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"744.43976"	"1487.87224"	"1487.87213"	"0.07"	"0.00005"	"8/78"	"8"	"78"	"2431887.57196045"	"HCD"	"MS2"	"7.032162"	"151.6"	"100.000"	"91.7985"	"32282"	"32282"	"32267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.7"	""	"206.2"	""	"207.1"	""	"306.2"	""	"244.4"	"262.5"	""	"833"	"52"	"36.000"	"29.000"	"0.000245818749891573"	"25"	"9.9E-05"	"0.000583"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"496.62894"	"1487.87226"	"1487.87213"	"0.08"	"0.00004"	"8/78"	"8"	"78"	"2963848.97161865"	"HCD"	"MS2"	"7.728088"	"89.6"	"100.000"	"91.8793"	"32315"	"32315"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.7"	""	"112.4"	""	"109.7"	""	"181.8"	""	"149.5"	"170.0"	""	"834"	"26"	"36.000"	"29.000"	"0.0942184716182147"	"22"	"9.9E-05"	"0.0008888"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"744.44000"	"1487.87273"	"1487.87213"	"0.40"	"0.00030"	"8/78"	"8"	"78"	"3219424.63916016"	"HCD"	"MS2"	"3.788015"	"195.3"	"100.000"	"91.9008"	"32288"	"32288"	"32271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"266.4"	""	"240.1"	""	"274.8"	""	"384.3"	""	"325.6"	"358.9"	""	"820"	"52"	"36.000"	"29.000"	"0.000241982442870456"	"25"	"0.0001686"	"0.001478"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"496.62915"	"1487.87290"	"1487.87213"	"0.52"	"0.00026"	"8/78"	"8"	"78"	"7345522.12213135"	"HCD"	"MS2"	"5.042525"	"212.5"	"100.000"	"92.5118"	"32537"	"32537"	"32520"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"273.4"	""	"242.3"	""	"300.4"	""	"407.3"	""	"373.0"	"418.9"	""	"820"	"28"	"36.000"	"29.000"	"0.0654310450367061"	"24"	"0.0001991"	"0.003162"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"496.62915"	"1487.87290"	"1487.87213"	"0.52"	"0.00026"	"8/78"	"8"	"78"	"7452297.69049072"	"HCD"	"MS2"	"6.266943"	"221.8"	"100.000"	"92.4461"	"32546"	"32546"	"32529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.1"	""	"259.2"	""	"291.1"	""	"421.7"	"2.1"	"401.6"	"439.1"	""	"820"	"29"	"36.000"	"29.000"	"0.0480600099874734"	"22"	"0.0001991"	"0.002268"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"744.44019"	"1487.87309"	"1487.87213"	"0.65"	"0.00048"	"8/78"	"8"	"78"	"18116092.939209"	"HCD"	"MS2"	"0.1878655"	"424.2"	"39.724"	"92.3678"	"32514"	"32514"	"32497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"532.2"	""	"479.6"	""	"618.2"	""	"792.1"	"3.7"	"731.2"	"863.3"	""	"820"	"52"	"36.000"	"29.000"	"0.000238662319286057"	"24"	"0.0001991"	"0.004796"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"744.44019"	"1487.87309"	"1487.87213"	"0.65"	"0.00048"	"8/78"	"8"	"78"	"16354333.532959"	"HCD"	"MS2"	"0.08038485"	"611.9"	"62.764"	"92.1937"	"32408"	"32408"	"32391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"804.3"	""	"722.0"	""	"876.2"	""	"1168.4"	"6.7"	"1041.3"	"1177.1"	""	"820"	"50"	"36.000"	"29.000"	"0.000402516656638194"	"23"	"0.0001991"	"0.00357"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"744.44025"	"1487.87322"	"1487.87213"	"0.73"	"0.00054"	"8/78"	"8"	"78"	"14813486.4622192"	"HCD"	"MS2"	"0.1589614"	"626.6"	"72.535"	"92.0846"	"32399"	"32399"	"32382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"876.9"	""	"738.4"	""	"887.0"	""	"1174.6"	"7.3"	"1060.1"	"1189.6"	""	"820"	"52"	"36.000"	"29.000"	"0.000239763934499237"	"23"	"0.0001991"	"0.00223"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"744.44037"	"1487.87346"	"1487.87213"	"0.89"	"0.00066"	"8/78"	"8"	"78"	"2817930.5480957"	"HCD"	"MS2"	"0"	"180.8"	"100.000"	"92.6647"	"32634"	"32634"	"32620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.9"	""	"198.0"	""	"264.9"	""	"329.2"	""	"306.9"	"384.7"	""	"817"	"52"	"36.000"	"29.000"	"0.00025656183957524"	"27"	"9.9E-05"	"0.0004092"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILAEK"	"[K].tPEEILAEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"744.44043"	"1487.87358"	"1487.87213"	"0.98"	"0.00073"	"8/78"	"8"	"78"	"13157430.3712769"	"HCD"	"MS2"	"0"	"758.0"	"100.000"	"92.4726"	"32521"	"32521"	"32504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1011.0"	""	"860.7"	""	"1058.0"	""	"1408.3"	"11.1"	"1299.4"	"1534.6"	""	"817"	"51"	"36.000"	"29.000"	"0.000349294752213393"	"24"	"0.0001991"	"0.002092"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEGLENVLK"	"[K].qEGLENVLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"744.44513"	"1487.88298"	"1487.88336"	"-0.26"	"-0.00019"	"8/86"	"8"	"86"	"1047647.32275391"	"HCD"	"MS2"	"36.16548"	"78.0"	"100.000"	"81.4196"	"28097"	"28097"	"28080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.4"	""	"89.0"	""	"93.8"	""	"141.6"	"0.8"	"144.2"	"161.3"	""	"742"	"48"	"35.000"	"28.000"	"0.000619974617909272"	"21"	"0"	"0.0001083"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEGLENVLK"	"[K].qEGLENVLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"744.44550"	"1487.88371"	"1487.88336"	"0.24"	"0.00018"	"8/86"	"8"	"86"	"988136.647216797"	"HCD"	"MS2"	"43.42795"	"78.4"	"100.000"	"81.3250"	"28032"	"28032"	"28014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.5"	""	"98.2"	""	"104.3"	""	"119.9"	""	"141.3"	"160.8"	""	"753"	"49"	"35.000"	"28.000"	"0.000520912741682875"	"25"	"0"	"0.0001084"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEEGLLK"	"[K].eVLEEGLLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.7083"	"0.0000"	"1"	"1"	"1"	"744.45728"	"1487.90727"	"1487.90852"	"-0.84"	"-0.00062"	"9/72"	"9"	"72"	"193698.041931152"	"HCD"	"MS2"	"29.65772"	"16.7"	"100.000"	"102.1464"	"36459"	"36459"	"36443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"21.0"	""	"19.6"	""	"28.9"	""	"30.0"	"35.2"	""	"659"	"24"	"35.000"	"28.000"	"0.120463483836525"	"21"	"0.002035"	"0.01846"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEEGLLK"	"[K].eVLEEGLLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"3"	"3"	"0.5152"	"0.0000"	"1"	"1"	"1"	"496.64078"	"1487.90778"	"1487.90852"	"-0.50"	"-0.00025"	"7/72"	"7"	"72"	"338668.697998047"	"HCD"	"MS2"	"30.01418"	"12.1"	"100.000"	"102.0655"	"36427"	"36427"	"36398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"17.2"	""	"13.6"	""	"20.8"	""	"23.4"	"22.0"	""	"659"	"33"	"35.000"	"28.000"	"0.0150264163805952"	""	"0"	"0.0002881"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEEGLLK"	"[K].eVLEEGLLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"744.45807"	"1487.90886"	"1487.90852"	"0.23"	"0.00017"	"8/72"	"8"	"72"	"284592.409912109"	"HCD"	"MS2"	"32.26399"	"23.4"	"100.000"	"101.8625"	"36345"	"36345"	"36323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.4"	""	"22.8"	""	"26.8"	""	"40.4"	""	"43.3"	"52.8"	""	"625"	"56"	"34.000"	"27.000"	"8.43043572639039E-05"	""	"0"	"4.548E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLEEGLLK"	"[K].eVLEEGLLk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"744.45813"	"1487.90898"	"1487.90852"	"0.31"	"0.00023"	"8/72"	"8"	"72"	"392555.299926758"	"HCD"	"MS2"	"20.53482"	"35.1"	"100.000"	"101.7035"	"36255"	"36255"	"36236"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.7"	""	"38.2"	""	"39.5"	""	"60.0"	""	"69.3"	"79.3"	""	"615"	"58"	"34.000"	"27.000"	"4.68646221792667E-05"	""	"0"	"2.301E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAIWDTAGQER"	"[K].lAIWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"744.90344"	"1488.79961"	"1488.80081"	"-0.81"	"-0.00060"	"5/94"	"5"	"94"	"264416.563293457"	"HCD"	"MS2"	"27.20967"	"21.2"	"100.000"	"95.0812"	"33573"	"33573"	"33546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"26.7"	""	"24.6"	""	"34.7"	""	"48.3"	"44.8"	""	"853"	"31"	"36.000"	"29.000"	"0.0306139265227236"	"23"	"9.9E-05"	"0.0004011"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAIWDTAGQER"	"[K].lAIWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"Q5EB77"	"Ras-related protein Rab-18 OS=Rattus norvegicus OX=10116 GN=Rab18 PE=2 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"744.90442"	"1488.80156"	"1488.80081"	"0.51"	"0.00038"	"5/94"	"5"	"94"	"216728.754455566"	"HCD"	"MS2"	"41.2375"	"17.0"	"100.000"	"95.0671"	"33600"	"33600"	"33576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"22.5"	""	"25.3"	""	"23.0"	""	"40.0"	"34.3"	""	"853"	"29"	"36.000"	"29.000"	"0.0518703329275676"	"19"	"9.9E-05"	"0.000483"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILDGNGLEK"	"[K].aILDGnGLEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"3"	"3"	"0.7209"	"0.0000"	"1"	"1"	"1"	"496.96057"	"1488.86716"	"1488.86738"	"-0.15"	"-0.00007"	"7/90"	"7"	"90"	"481088.975769043"	"HCD"	"MS2"	"66.63722"	"24.2"	"100.000"	"90.0285"	"31570"	"31570"	"31555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.1"	""	"31.5"	""	"33.8"	""	"35.1"	""	"47.6"	"48.9"	""	"871"	"43"	"36.000"	"29.000"	"0.00220286640302356"	"27"	"0"	"8.069E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILDGNGLEK"	"[K].aILDGnGLEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"744.93756"	"1488.86785"	"1488.86738"	"0.31"	"0.00023"	"7/90"	"7"	"90"	"322946.918762207"	"HCD"	"MS2"	"43.53349"	"26.8"	"100.000"	"89.9734"	"31548"	"31548"	"31534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"26.5"	""	"35.1"	""	"44.3"	"0.5"	"52.8"	"52.6"	""	"875"	"39"	"36.000"	"29.000"	"0.00548249264036869"	""	"0"	"1.845E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILDGNGLEK"	"[K].aILDGnGLEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"744.93793"	"1488.86858"	"1488.86738"	"0.80"	"0.00060"	"15/90"	"15"	"90"	"306098.410827637"	"HCD"	"MS2"	"11.16955"	"23.6"	"100.000"	"90.2682"	"31666"	"31666"	"31652"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.6"	""	"28.7"	""	"29.0"	""	"37.3"	""	"47.1"	"53.0"	""	"871"	"38"	"36.000"	"29.000"	"0.00635313610349914"	""	"0"	"5.986E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILDGNGLEK"	"[K].aILDGnGLEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.6304"	"0.0000"	"1"	"1"	"1"	"744.93805"	"1488.86882"	"1488.86738"	"0.97"	"0.00072"	"15/90"	"15"	"90"	"338022.559692383"	"HCD"	"MS2"	"27.61493"	"29.9"	"100.000"	"90.3223"	"31650"	"31650"	"31632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.3"	""	"42.3"	""	"31.1"	""	"45.8"	""	"66.5"	"56.9"	""	"869"	"46"	"36.000"	"29.000"	"0.00105436208631331"	""	"0"	"2.455E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILDGNGLEK"	"[K].aILDGnGLEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"Q5BK81"	"Prostaglandin reductase 2 OS=Rattus norvegicus OX=10116 GN=Ptgr2 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"744.93903"	"1488.87078"	"1488.86738"	"2.28"	"0.00170"	"12/90"	"12"	"90"	"284283.977966309"	"HCD"	"MS2"	"38.82583"	"22.8"	"100.000"	"90.0320"	"31533"	"31533"	"31507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"28.6"	""	"25.8"	""	"39.6"	""	"44.5"	"44.7"	""	"868"	"32"	"36.000"	"29.000"	"0.0281507344159936"	""	"0.0001991"	"0.002434"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLADETLLK"	"[K].qLADETLLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6122"	"0.0000"	"1"	"1"	"1"	"744.95508"	"1488.90288"	"1488.90377"	"-0.60"	"-0.00044"	"8/84"	"8"	"84"	"805317.444335938"	"HCD"	"MS2"	"21.4987"	"74.9"	"100.000"	"91.1543"	"32022"	"32022"	"32003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.9"	""	"39.9"	""	"39.5"	""	"150.4"	""	"224.7"	"208.5"	""	"750"	"49"	"35.000"	"28.000"	"0.000421726865237597"	""	"0"	"1.348E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLADETLLK"	"[K].qLADETLLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"496.97272"	"1488.90360"	"1488.90377"	"-0.11"	"-0.00006"	"9/84"	"9"	"84"	"512694.624328613"	"HCD"	"MS2"	"42.02905"	"19.3"	"100.000"	"91.1335"	"32014"	"32014"	"31993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"13.9"	""	"16.5"	""	"36.6"	""	"53.6"	"49.7"	""	"724"	"16"	"35.000"	"28.000"	"0.943427585099601"	"25"	"0.0001991"	"0.005256"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLADETLLK"	"[K].qLADETLLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"496.97281"	"1488.90387"	"1488.90377"	"0.07"	"0.00004"	"6/84"	"6"	"84"	"583281.040649414"	"HCD"	"MS2"	"28.58362"	"20.9"	"100.000"	"91.2314"	"32016"	"32016"	"31994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"20.4"	""	"16.5"	""	"41.2"	""	"48.6"	"54.4"	""	"742"	"35"	"35.000"	"28.000"	"0.0104803047069373"	"28"	"0.0001991"	"0.003719"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLADETLLK"	"[K].qLADETLLk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"744.95587"	"1488.90447"	"1488.90377"	"0.47"	"0.00035"	"8/84"	"8"	"84"	"728053.843261719"	"HCD"	"MS2"	"24.35567"	"65.2"	"100.000"	"91.2637"	"32029"	"32029"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.5"	""	"39.3"	""	"36.8"	""	"128.9"	"0.6"	"191.6"	"175.4"	""	"740"	"49"	"35.000"	"28.000"	"0.000465802402363842"	""	"0"	"2.719E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"745.37402"	"1489.74077"	"1489.74311"	"-1.57"	"-0.00117"	"14/66"	"14"	"66"	"424069.269958496"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"52.9610"	"16556"	"16556"	"16530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.6"	""	"48.9"	""	"59.2"	""	"45.4"	""	"62.5"	"69.2"	""	"568"	"47"	"34.000"	"27.000"	"0.000611390012661722"	"15"	"0.0001991"	"0.003592"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"745.37427"	"1489.74126"	"1489.74311"	"-1.24"	"-0.00092"	"8/66"	"8"	"66"	"416941.109802246"	"HCD"	"MS2"	"40.046"	"32.4"	"100.000"	"50.2687"	"15429"	"15429"	"15398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.6"	""	"47.0"	""	"49.7"	""	"42.6"	""	"56.8"	"55.4"	""	"571"	"25"	"34.000"	"27.000"	"0.087017401953879"	"14"	"0.002166"	"0.0197"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"745.37445"	"1489.74162"	"1489.74311"	"-1.00"	"-0.00074"	"14/66"	"14"	"66"	"655213.39453125"	"HCD"	"MS2"	"22.62632"	"49.7"	"100.000"	"49.9938"	"15352"	"15352"	"15323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.6"	""	"62.5"	""	"75.9"	""	"63.3"	""	"85.4"	"94.8"	""	"572"	"31"	"34.000"	"27.000"	"0.0245677867150543"	"15"	"0.002525"	"0.02421"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"745.37488"	"1489.74248"	"1489.74311"	"-0.42"	"-0.00031"	"14/66"	"14"	"66"	"645384.69519043"	"HCD"	"MS2"	"0"	"54.9"	"100.000"	"53.2556"	"16676"	"16676"	"16657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.8"	""	"68.9"	""	"86.1"	""	"65.3"	""	"94.8"	"109.1"	""	"583"	"47"	"34.000"	"27.000"	"0.000639202638654656"	"16"	"0.0005161"	"0.00695"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"745.37500"	"1489.74272"	"1489.74311"	"-0.26"	"-0.00019"	"8/66"	"8"	"66"	"786669.092651367"	"HCD"	"MS2"	"10.38479"	"59.0"	"100.000"	"49.9190"	"15286"	"15286"	"15262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.8"	""	"74.1"	""	"89.1"	""	"86.6"	"0.5"	"100.1"	"105.1"	""	"568"	"30"	"34.000"	"27.000"	"0.030082805795035"	"14"	"0.002673"	"0.02795"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.4118"	"0.0000"	"1"	"1"	"1"	"745.37500"	"1489.74272"	"1489.74311"	"-0.26"	"-0.00019"	"8/72"	"8"	"72"	"1364107.00378418"	"HCD"	"MS2"	"4.679994"	"129.6"	"100.000"	"73.5305"	"24900"	"24900"	"24881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.1"	""	"175.0"	""	"172.9"	""	"175.5"	"0.7"	"239.4"	"277.4"	""	"568"	"51"	"34.000"	"27.000"	"0.000203384728500464"	""	"0"	"9.388E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.4318"	"0.0000"	"1"	"1"	"1"	"745.37512"	"1489.74297"	"1489.74311"	"-0.09"	"-0.00007"	"8/72"	"8"	"72"	"335077.275695801"	"HCD"	"MS2"	"25.77667"	"34.2"	"100.000"	"73.7344"	"24954"	"24954"	"24932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"46.5"	""	"47.2"	""	"39.0"	""	"68.4"	"70.5"	""	"572"	"44"	"34.000"	"27.000"	"0.00116510759451976"	""	"0"	"1.763E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAMk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"745.37512"	"1489.74297"	"1489.74311"	"-0.09"	"-0.00007"	"14/66"	"14"	"66"	"754373.194030762"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"49.5750"	"15181"	"15181"	"15157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.4"	""	"86.9"	""	"96.8"	""	"74.0"	"0.5"	"109.6"	"112.1"	""	"572"	"28"	"34.000"	"27.000"	"0.0467052857097779"	"14"	"0.0001991"	"0.005628"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"745.37518"	"1489.74309"	"1489.74311"	"-0.01"	"-0.00001"	"14/66"	"14"	"66"	"645632.598815918"	"HCD"	"MS2"	"0"	"52.6"	"100.000"	"53.5685"	"16770"	"16770"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.3"	""	"67.4"	""	"79.5"	""	"67.8"	"0.1"	"90.1"	"98.5"	""	"572"	"51"	"34.000"	"27.000"	"0.000216953186458346"	"16"	"0.0001991"	"0.002582"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAMk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.3182"	"0.0000"	"1"	"1"	"1"	"745.37549"	"1489.74370"	"1489.74311"	"0.40"	"0.00030"	"14/72"	"14"	"72"	"1454464.56555176"	"HCD"	"MS2"	"5.032768"	"139.6"	"100.000"	"73.3958"	"24816"	"24816"	"24794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"212.0"	""	"189.3"	""	"195.3"	""	"176.3"	"1.9"	"265.8"	"282.6"	""	"567"	"44"	"34.000"	"27.000"	"0.00116560945933132"	""	"0"	"0.0001469"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDMAAAmk.[AN]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"745.37610"	"1489.74492"	"1489.74311"	"1.22"	"0.00091"	"14/66"	"14"	"66"	"370075.344421387"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"53.2669"	"16647"	"16647"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.6"	""	"50.7"	""	"51.5"	""	"49.0"	"1.0"	"64.1"	"67.3"	""	"584"	"51"	"34.000"	"27.000"	"0.000247390404929054"	"16"	"0.0001686"	"0.00171"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HISDLYEDLR"	"[R].hISDLYEDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8983"	"0.0000"	"1"	"1"	"1"	"497.26611"	"1489.78379"	"1489.78482"	"-0.70"	"-0.00035"	"12/82"	"12"	"82"	"770218.711547852"	"HCD"	"MS2"	"20.47003"	"14.6"	"100.000"	"81.1103"	"27972"	"27972"	"27951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"22.8"	""	"18.6"	""	"24.1"	""	"29.9"	"27.1"	""	"826"	"59"	"36.000"	"29.000"	"4.6446185424834E-05"	"22"	"0"	"3.348E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HISDLYEDLR"	"[R].hISDLYEDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9057"	"0.0000"	"1"	"1"	"1"	"497.26639"	"1489.78461"	"1489.78482"	"-0.14"	"-0.00007"	"7/82"	"7"	"82"	"1120822.1496582"	"HCD"	"MS2"	"9.83807"	"19.1"	"100.000"	"80.7230"	"27788"	"27788"	"27766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"28.0"	""	"26.7"	""	"29.9"	""	"31.3"	"43.2"	""	"821"	"53"	"36.000"	"29.000"	"0.000190244960551746"	"21"	"0"	"1.694E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HISDLYEDLR"	"[R].hISDLYEDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"497.26666"	"1489.78543"	"1489.78482"	"0.41"	"0.00020"	"7/82"	"7"	"82"	"879968.459106445"	"HCD"	"MS2"	"5.288382"	"16.8"	"100.000"	"81.0116"	"27905"	"27905"	"27886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"21.4"	""	"23.5"	""	"23.5"	"0.8"	"39.3"	"29.1"	""	"826"	"48"	"36.000"	"29.000"	"0.000620797631995179"	"19"	"0"	"5.575E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HISDLYEDLR"	"[R].hISDLYEDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"497.26669"	"1489.78553"	"1489.78482"	"0.47"	"0.00023"	"7/82"	"7"	"82"	"1066538.23114014"	"HCD"	"MS2"	"17.3892"	"17.2"	"100.000"	"80.8104"	"27851"	"27851"	"27827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"20.0"	""	"27.8"	""	"23.0"	""	"36.5"	"33.0"	""	"826"	"53"	"36.000"	"29.000"	"0.000192287056624982"	"23"	"0"	"6.38E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDHLGDSPK"	"[R].yDHLGDSPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"497.27246"	"1489.80283"	"1489.80511"	"-1.53"	"-0.00076"	"10/74"	"10"	"74"	"2730279.29821777"	"HCD"	"MS2"	"66.79539"	"118.1"	"100.000"	"40.9637"	"11688"	"11688"	"11672"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"163.9"	""	"153.3"	""	"163.9"	""	"188.3"	""	"228.6"	"223.9"	""	"944"	"17"	"36.000"	"29.000"	"0.968148548405667"	"14"	"0.0001686"	"0.001368"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDHLGDSPK"	"[R].yDHLGDSPk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"Q66HF1"	"NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufs1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"497.27301"	"1489.80448"	"1489.80511"	"-0.43"	"-0.00021"	"10/74"	"10"	"74"	"2788910.2098999"	"HCD"	"MS2"	"44.2948"	"115.6"	"100.000"	"41.0659"	"11695"	"11695"	"11673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.0"	""	"151.4"	""	"176.0"	""	"176.4"	"2.8"	"215.9"	"217.7"	""	"933"	"17"	"36.000"	"29.000"	"0.988215469593426"	"14"	"0.0001686"	"0.001025"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDNIQDK"	"[R].lEGDNIQDk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"745.41669"	"1489.82610"	"1489.82624"	"-0.10"	"-0.00007"	"8/84"	"8"	"84"	"456113.952758789"	"HCD"	"MS2"	"45.23123"	"43.0"	"100.000"	"53.8124"	"16870"	"16870"	"16841"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.5"	""	"37.9"	""	"43.5"	""	"80.0"	""	"92.8"	"85.5"	""	"993"	"45"	"36.000"	"29.000"	"0.00166693725471627"	"28"	"0"	"4.575E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGDNIQDK"	"[R].lEGDNIQDk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"Q66X93"	"Staphylococcal nuclease domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Snd1 PE=1 SV=1"	"0"	"2"	"2"	"0.6579"	"0.0000"	"1"	"1"	"1"	"745.41772"	"1489.82817"	"1489.82624"	"1.29"	"0.00096"	"6/84"	"6"	"84"	"488135.111572266"	"HCD"	"MS2"	"39.78317"	"45.9"	"100.000"	"53.4902"	"16772"	"16772"	"16744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"43.3"	""	"47.1"	""	"85.3"	""	"87.0"	"99.0"	""	"1016"	"38"	"37.000"	"30.000"	"0.00730909677753969"	"28"	"0"	"0.0002915"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEIGLPDEK"	"[K].mEIGLPDEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"745.42072"	"1489.83415"	"1489.83364"	"0.35"	"0.00026"	"7/76"	"7"	"76"	"356044.645935059"	"HCD"	"MS2"	"29.05632"	"29.9"	"100.000"	"96.3637"	"34125"	"34125"	"34100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"37.6"	""	"42.5"	""	"44.8"	"1.5"	"57.2"	"55.4"	""	"1078"	"38"	"37.000"	"30.000"	"0.00868137997361087"	"29"	"9.9E-05"	"0.001017"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"745.43433"	"1489.86138"	"1489.86263"	"-0.84"	"-0.00063"	"9/92"	"9"	"92"	"1669726.87176514"	"HCD"	"MS2"	"5.515818"	"113.9"	"100.000"	"51.6751"	"15998"	"15998"	"15979"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.5"	""	"163.3"	""	"174.9"	""	"193.4"	"3.2"	"185.1"	"223.7"	""	"910"	"62"	"36.000"	"29.000"	"3.06204378609365E-05"	"24"	"0"	"3.26E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"745.43475"	"1489.86223"	"1489.86263"	"-0.27"	"-0.00020"	"9/92"	"9"	"92"	"1562022.45007324"	"HCD"	"MS2"	"0"	"108.7"	"100.000"	"51.3551"	"15902"	"15902"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.2"	""	"152.1"	""	"168.0"	""	"178.9"	"3.7"	"182.2"	"204.4"	""	"885"	"64"	"36.000"	"29.000"	"1.61775695288808E-05"	"24"	"0"	"2.036E-06"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.6981"	"0.0000"	"1"	"1"	"1"	"745.43506"	"1489.86284"	"1489.86263"	"0.14"	"0.00011"	"14/92"	"14"	"92"	"376003.931335449"	"HCD"	"MS2"	"0"	"35.3"	"100.000"	"51.6997"	"16042"	"16042"	"16015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"48.3"	""	"54.4"	""	"50.7"	""	"66.9"	"69.5"	""	"891"	"53"	"36.000"	"29.000"	"0.000201301823219028"	""	"0"	"9.79E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGVEGADVVK"	"[K].aSGVEGADVVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"745.43518"	"1489.86308"	"1489.86263"	"0.31"	"0.00023"	"10/92"	"10"	"92"	"497577.528076172"	"HCD"	"MS2"	"0"	"43.0"	"100.000"	"51.9889"	"16125"	"16125"	"16100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.3"	""	"55.7"	""	"70.0"	""	"57.4"	""	"88.8"	"83.6"	""	"889"	"65"	"36.000"	"29.000"	"1.54835936533507E-05"	""	"0"	"1.058E-06"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELTLEGIK"	"[K].eELTLEGIk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"745.44739"	"1489.88750"	"1489.88778"	"-0.19"	"-0.00014"	"8/74"	"8"	"74"	"548341.887512207"	"HCD"	"MS2"	"10.60588"	"44.5"	"100.000"	"97.5531"	"34604"	"34604"	"34584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.2"	""	"54.2"	""	"68.4"	""	"69.8"	""	"76.9"	"87.2"	""	"767"	"50"	"35.000"	"28.000"	"0.000374770474236553"	""	"0"	"1.763E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELTLEGIK"	"[K].eELTLEGIk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"745.44775"	"1489.88823"	"1489.88778"	"0.30"	"0.00023"	"8/74"	"8"	"74"	"561104.376586914"	"HCD"	"MS2"	"16.43867"	"45.0"	"100.000"	"97.5092"	"34555"	"34555"	"34537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.3"	""	"60.4"	""	"61.1"	""	"74.4"	"0.1"	"75.6"	"87.6"	""	"781"	"54"	"35.000"	"28.000"	"0.000173628509946687"	""	"0"	"1.694E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.86017"	"1490.71306"	"1490.71470"	"-1.10"	"-0.00082"	"10/92"	"10"	"92"	"2040492.94104004"	"HCD"	"MS2"	"7.639709"	"94.9"	"100.000"	"51.1345"	"15816"	"15816"	"15798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.1"	""	"95.4"	""	"114.6"	""	"222.8"	"3.3"	"180.8"	"179.2"	""	"387"	"42"	"32.000"	"25.000"	"0.00121809446382868"	"15"	"0"	"0.0003898"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.86090"	"1490.71453"	"1490.71470"	"-0.11"	"-0.00009"	"4/92"	"4"	"92"	"184935.06048584"	"HCD"	"MS2"	"26.95808"	"12.8"	"100.000"	"55.0516"	"17409"	"17409"	"17378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"17.6"	""	"18.1"	""	"16.7"	""	"22.4"	"26.8"	""	"389"	"6"	"32.000"	"25.000"	"5.15133276959003"	"13"	"0.00511"	"0.06497"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.86096"	"1490.71465"	"1490.71470"	"-0.03"	"-0.00002"	"10/92"	"10"	"92"	"253746.392700195"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"57.1097"	"18204"	"18204"	"18184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"26.3"	""	"26.6"	""	"40.2"	""	"40.5"	"48.6"	""	"389"	"13"	"32.000"	"25.000"	"0.899331086621561"	"13"	"0.008868"	"0.1128"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDYMVGSYGPR"	"[K].tDYmVGSYGPR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.86127"	"1490.71526"	"1490.71470"	"0.38"	"0.00028"	"8/92"	"8"	"92"	"2218451.67700195"	"HCD"	"MS2"	"4.307084"	"104.7"	"100.000"	"51.4465"	"15906"	"15906"	"15885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.6"	""	"102.3"	""	"133.5"	""	"256.7"	"2.6"	"190.2"	"193.7"	""	"400"	"42"	"33.000"	"26.000"	"0.00121347265917701"	"15"	"0"	"0.0001016"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APMAAQGMVETR"	"[R].aPMAAQGMVETR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.88544"	"1490.76360"	"1490.76568"	"-1.40"	"-0.00104"	"9/102"	"9"	"102"	"241110.305847168"	"HCD"	"MS2"	"37.41616"	"18.3"	"100.000"	"52.3143"	"16292"	"16292"	"16262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"19.4"	""	"18.1"	""	"30.6"	""	"42.2"	"43.0"	""	"723"	"8"	"35.000"	"28.000"	"5.56042902469547"	"13"	"0.009781"	"0.1304"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APMAAQGMVETR"	"[R].aPMAAQGMVETR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"745.88739"	"1490.76750"	"1490.76568"	"1.22"	"0.00091"	"9/102"	"9"	"102"	"293859.077087402"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"52.6940"	"16413"	"16413"	"16385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"28.6"	""	"26.3"	""	"27.9"	"0.2"	"40.9"	"48.6"	""	"779"	"25"	"35.000"	"28.000"	"0.13167625370223"	"19"	"0.002588"	"0.02628"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEATDDSPK"	"[K].gLEATDDSPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"745.90820"	"1490.80913"	"1490.81026"	"-0.76"	"-0.00056"	"8/82"	"8"	"82"	"619991.713195801"	"HCD"	"MS2"	"0"	"54.6"	"100.000"	"44.2119"	"12972"	"12972"	"12945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.3"	""	"65.1"	""	"71.4"	""	"78.9"	"0.0"	"97.4"	"107.4"	""	"998"	"52"	"36.000"	"29.000"	"0.00032366858234057"	"24"	"0"	"2.636E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEATDDSPK"	"[K].gLEATDDSPk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.7541"	"0.0000"	"1"	"1"	"1"	"745.90948"	"1490.81169"	"1490.81026"	"0.96"	"0.00072"	"15/82"	"15"	"82"	"662572.29876709"	"HCD"	"MS2"	"0"	"57.7"	"100.000"	"44.0265"	"12932"	"12932"	"12906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"74.3"	""	"67.3"	""	"83.2"	"1.9"	"115.7"	"103.7"	""	"990"	"61"	"36.000"	"29.000"	"4.19377569999595E-05"	""	"0"	"4.623E-06"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"745.91052"	"1490.81377"	"1490.81646"	"-1.80"	"-0.00134"	"6/98"	"6"	"98"	"311026.075622559"	"HCD"	"MS2"	"11.29208"	"24.0"	"100.000"	"79.2182"	"27203"	"27203"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.6"	""	"28.5"	""	"31.1"	""	"45.3"	""	"47.6"	"48.6"	""	"991"	"20"	"36.000"	"29.000"	"0.46886051345675"	"14"	"0.001615"	"0.01384"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"745.91119"	"1490.81511"	"1490.81646"	"-0.90"	"-0.00067"	"7/98"	"7"	"98"	"356653.869995117"	"HCD"	"MS2"	"36.09097"	"28.9"	"100.000"	"78.6558"	"26974"	"26974"	"26951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.5"	""	"33.6"	""	"35.6"	""	"53.7"	""	"52.4"	"54.5"	""	"979"	"42"	"36.000"	"29.000"	"0.00282978015205099"	"22"	"0"	"4.605E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"745.91119"	"1490.81511"	"1490.81646"	"-0.90"	"-0.00067"	"8/98"	"8"	"98"	"591344.424560547"	"HCD"	"MS2"	"17.49919"	"41.4"	"100.000"	"78.6005"	"26925"	"26925"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.7"	""	"48.3"	""	"52.1"	""	"77.5"	""	"71.8"	"80.6"	""	"979"	"56"	"36.000"	"29.000"	"0.000126401636331563"	"19"	"0"	"3.914E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"745.91150"	"1490.81572"	"1490.81646"	"-0.49"	"-0.00037"	"8/98"	"8"	"98"	"1009555.0657959"	"HCD"	"MS2"	"2.262869"	"58.6"	"100.000"	"78.8911"	"27043"	"27043"	"27024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.0"	""	"66.9"	""	"72.5"	""	"117.9"	""	"99.6"	"124.9"	""	"1012"	"43"	"37.000"	"30.000"	"0.0025127571465387"	"22"	"0"	"4.173E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLDQQVEVFR"	"[K].qLDQQVEVFR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"745.91162"	"1490.81597"	"1490.81646"	"-0.33"	"-0.00025"	"8/98"	"8"	"98"	"1144453.18560791"	"HCD"	"MS2"	"2.76053"	"67.5"	"100.000"	"78.9326"	"27087"	"27087"	"27073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.0"	""	"68.6"	""	"79.2"	""	"134.9"	"1.0"	"111.9"	"144.4"	""	"1010"	"54"	"37.000"	"30.000"	"0.000197374652375163"	"20"	"0"	"2.83E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVHIIEGDHR"	"[K].vSVHIIEGDHR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"4"	"4"	"0.9714"	"0.0000"	"1"	"1"	"1"	"373.46182"	"1490.82546"	"1490.82769"	"-1.50"	"-0.00056"	"9/94"	"9"	"94"	"7519920.34094238"	"HCD"	"MS2"	"4.342646"	"101.4"	"100.000"	"38.8523"	"10834"	"10834"	"10814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.9"	""	"134.0"	""	"149.4"	""	"174.1"	""	"168.9"	"194.0"	""	"955"	"35"	"36.000"	"29.000"	"0.0134888018802225"	"16"	"9.9E-05"	"0.0007456"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVHIIEGDHR"	"[K].vSVHIIEGDHR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"373.46191"	"1490.82583"	"1490.82769"	"-1.25"	"-0.00047"	"9/94"	"9"	"94"	"6479121.56671143"	"HCD"	"MS2"	"6.948601"	"95.0"	"100.000"	"38.9439"	"10836"	"10836"	"10813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.1"	""	"130.7"	""	"145.9"	""	"159.9"	"1.1"	"158.1"	"178.7"	""	"958"	"31"	"36.000"	"29.000"	"0.0404888566831779"	"15"	"9.9E-05"	"0.0008691"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDAVAEASK"	"[R].lEDAVAEASk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"745.92535"	"1490.84343"	"1490.84664"	"-2.16"	"-0.00161"	"4/86"	"4"	"86"	"216449.027893066"	"HCD"	"MS2"	"57.79763"	"20.4"	"100.000"	"76.4239"	"26046"	"26046"	"26016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"27.2"	""	"25.2"	""	"28.1"	"1.2"	"39.4"	"42.1"	""	"924"	"11"	"36.000"	"29.000"	"3.79876104275547"	"15"	"0.004672"	"0.05508"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAELDETK"	"[K].vQAELDETk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"745.92590"	"1490.84453"	"1490.84664"	"-1.42"	"-0.00106"	"7/86"	"7"	"86"	"379975.362426758"	"HCD"	"MS2"	"42.6918"	"33.7"	"100.000"	"58.0614"	"18592"	"18592"	"18562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"43.4"	""	"40.1"	""	"58.4"	""	"68.6"	"64.4"	""	"932"	"37"	"36.000"	"29.000"	"0.00873747440759416"	"18"	"0"	"0.000302"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"745.92609"	"1490.84490"	"1490.84664"	"-1.17"	"-0.00087"	"6/84"	"6"	"84"	"488503.110778809"	"HCD"	"MS2"	"23.68575"	"42.0"	"100.000"	"59.4699"	"19166"	"19166"	"19144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.9"	""	"50.5"	""	"57.4"	""	"62.2"	""	"73.1"	"85.9"	""	"917"	"12"	"36.000"	"29.000"	"2.9197074633628"	"16"	"0.003001"	"0.03225"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"497.61987"	"1490.84507"	"1490.84664"	"-1.06"	"-0.00053"	"10/84"	"10"	"84"	"804641.00994873"	"HCD"	"MS2"	"19.21432"	"36.1"	"100.000"	"59.1432"	"19033"	"19033"	"19006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"38.9"	""	"43.5"	""	"56.0"	""	"81.0"	"73.7"	""	"917"	"38"	"36.000"	"29.000"	"0.00713410242090928"	"26"	"0.0001686"	"0.001431"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQAELDETK"	"[K].vQAELDETk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"Q5EGY4"	"Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"745.92633"	"1490.84538"	"1490.84664"	"-0.85"	"-0.00063"	"11/86"	"11"	"86"	"358243.439941406"	"HCD"	"MS2"	"100"	"32.4"	"100.000"	"57.7760"	"18511"	"18511"	"18482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.8"	""	"31.7"	""	"39.4"	""	"53.1"	""	"71.4"	"65.4"	""	"917"	"13"	"36.000"	"29.000"	"2.25081261215969"	"21"	"0.001348"	"0.01097"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"745.92657"	"1490.84587"	"1490.84664"	"-0.52"	"-0.00039"	"13/84"	"13"	"84"	"721780.785217285"	"HCD"	"MS2"	"21.78933"	"60.9"	"100.000"	"58.7841"	"18922"	"18922"	"18903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.5"	""	"63.0"	""	"73.5"	""	"98.3"	""	"120.1"	"119.3"	""	"921"	"42"	"36.000"	"29.000"	"0.00292569894117728"	"27"	"0"	"4.318E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"497.62018"	"1490.84598"	"1490.84664"	"-0.44"	"-0.00022"	"10/84"	"10"	"84"	"716114.84765625"	"HCD"	"MS2"	"20.85945"	"31.5"	"100.000"	"58.8922"	"18966"	"18966"	"18942"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.3"	""	"34.8"	""	"37.4"	""	"51.5"	"1.4"	"62.8"	"59.2"	""	"921"	"26"	"36.000"	"29.000"	"0.112002994617849"	"19"	"0.0001686"	"0.001891"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"745.92688"	"1490.84648"	"1490.84664"	"-0.11"	"-0.00008"	"8/84"	"8"	"84"	"1153791.07525635"	"HCD"	"MS2"	"20.16784"	"99.0"	"100.000"	"59.0926"	"19012"	"19012"	"18990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.1"	""	"99.4"	""	"131.5"	""	"163.0"	""	"200.4"	"187.2"	""	"896"	"41"	"36.000"	"29.000"	"0.00367517491859758"	"25"	"0"	"0.000144"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQSEAEK"	"[K].iLDQSEAEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"745.92700"	"1490.84673"	"1490.84664"	"0.06"	"0.00004"	"8/84"	"8"	"84"	"933800.330993652"	"HCD"	"MS2"	"5.034819"	"79.7"	"100.000"	"59.0947"	"19048"	"19048"	"19029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.0"	""	"76.3"	""	"110.9"	""	"125.5"	"1.6"	"160.0"	"155.7"	""	"918"	"53"	"36.000"	"29.000"	"0.000208839519608872"	"25"	"0"	"6.966E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEDAVAEASK"	"[R].lEDAVAEASk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"Q7TT49"	"Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus OX=10116 GN=Cdc42bpb PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"745.92743"	"1490.84758"	"1490.84664"	"0.63"	"0.00047"	"9/86"	"9"	"86"	"214022.097106934"	"HCD"	"MS2"	"21.72625"	"19.9"	"100.000"	"76.5632"	"26134"	"26134"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.5"	""	"20.8"	""	"23.2"	""	"29.9"	""	"43.9"	"40.9"	""	"917"	"16"	"36.000"	"29.000"	"1.18669562159769"	"22"	"0.002588"	"0.02622"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"497.63208"	"1490.88169"	"1490.88303"	"-0.90"	"-0.00045"	"10/80"	"10"	"80"	"653756.174499512"	"HCD"	"MS2"	"9.003662"	"22.7"	"100.000"	"95.6415"	"33800"	"33800"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"22.8"	""	"26.7"	""	"38.9"	""	"52.6"	"49.8"	""	"792"	"31"	"35.000"	"28.000"	"0.0326358693545149"	"23"	"0.0001991"	"0.005005"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"497.63223"	"1490.88214"	"1490.88303"	"-0.59"	"-0.00030"	"7/80"	"7"	"80"	"1755965.60308838"	"HCD"	"MS2"	"16.49302"	"53.7"	"100.000"	"95.3278"	"33673"	"33673"	"33649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.1"	""	"48.2"	""	"64.9"	""	"104.7"	""	"128.0"	"106.9"	""	"790"	"48"	"35.000"	"28.000"	"0.000597856693132301"	"27"	"0"	"4.96E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"497.63229"	"1490.88233"	"1490.88303"	"-0.47"	"-0.00023"	"7/80"	"7"	"80"	"1286318.11785889"	"HCD"	"MS2"	"28.57458"	"41.1"	"100.000"	"95.2815"	"33687"	"33687"	"33668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"44.8"	""	"48.8"	""	"77.0"	""	"89.2"	"84.5"	""	"790"	"46"	"35.000"	"28.000"	"0.000962935273255656"	"26"	"0"	"0.0001135"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"497.63232"	"1490.88242"	"1490.88303"	"-0.41"	"-0.00020"	"10/80"	"10"	"80"	"1063661.28729248"	"HCD"	"MS2"	"12.57407"	"34.0"	"100.000"	"95.5885"	"33811"	"33811"	"33791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.4"	""	"32.4"	""	"39.0"	""	"65.6"	""	"73.7"	"75.5"	""	"790"	"28"	"35.000"	"28.000"	"0.0611782564470429"	"22"	"0.0001991"	"0.00262"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"745.94489"	"1490.88249"	"1490.88303"	"-0.36"	"-0.00027"	"9/80"	"9"	"80"	"900476.945556641"	"HCD"	"MS2"	"12.78067"	"78.0"	"100.000"	"95.2399"	"33670"	"33670"	"33655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.1"	""	"85.1"	""	"84.2"	""	"152.7"	""	"169.5"	"159.3"	""	"790"	"73"	"35.000"	"28.000"	"1.82640503452708E-06"	""	"0"	"4.208E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"745.94501"	"1490.88274"	"1490.88303"	"-0.20"	"-0.00015"	"9/80"	"9"	"80"	"1658675.33972168"	"HCD"	"MS2"	"4.486312"	"122.9"	"100.000"	"95.5466"	"33794"	"33794"	"33777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.4"	""	"118.5"	""	"132.0"	""	"225.0"	""	"282.3"	"282.2"	""	"766"	"66"	"35.000"	"28.000"	"8.7337101357616E-06"	"27"	"0"	"3.552E-06"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"745.94507"	"1490.88286"	"1490.88303"	"-0.11"	"-0.00009"	"9/80"	"9"	"80"	"1892640.52905273"	"HCD"	"MS2"	"2.931218"	"147.1"	"100.000"	"95.5238"	"33752"	"33752"	"33736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.7"	""	"133.5"	""	"157.7"	""	"256.7"	""	"335.4"	"342.8"	""	"766"	"68"	"35.000"	"28.000"	"5.57440827862892E-06"	"27"	"0"	"3.451E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDDLSTAILK"	"[K].gDDLSTAILk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"745.94525"	"1490.88323"	"1490.88303"	"0.13"	"0.00010"	"9/80"	"9"	"80"	"652941.482421875"	"HCD"	"MS2"	"14.00634"	"56.8"	"100.000"	"95.2151"	"33627"	"33627"	"33607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.7"	""	"60.9"	""	"64.3"	""	"109.9"	""	"130.2"	"113.1"	""	"796"	"76"	"35.000"	"29.000"	"1.07123085196291E-06"	"29"	"0"	"1.248E-06"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.6316"	"0.0000"	"1"	"1"	"1"	"497.92563"	"1491.76233"	"1491.76409"	"-1.18"	"-0.00059"	"7/110"	"7"	"110"	"1171484.60083008"	"HCD"	"MS2"	"26.5659"	"19.7"	"100.000"	"71.0872"	"23880"	"23880"	"23854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"22.2"	""	"27.5"	""	"34.0"	""	"35.3"	"39.9"	""	"830"	"38"	"36.000"	"29.000"	"0.00699919505536328"	"29"	"0.0001991"	"0.002315"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"497.92584"	"1491.76297"	"1491.76409"	"-0.75"	"-0.00037"	"7/110"	"7"	"110"	"1571893.50738525"	"HCD"	"MS2"	"11.86148"	"24.6"	"100.000"	"71.2321"	"23970"	"23970"	"23948"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.9"	""	"29.0"	""	"35.7"	"1.9"	"42.5"	""	"46.1"	"46.1"	""	"846"	"38"	"36.000"	"29.000"	"0.00611421023025528"	""	"0"	"0.0001998"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPGFTLDDLDR"	"[R].gGPGFTLDDLDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"Q63767"	"Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"746.38538"	"1491.76348"	"1491.76409"	"-0.41"	"-0.00031"	"7/98"	"7"	"98"	"251805.958435059"	"HCD"	"MS2"	"26.54366"	"19.3"	"100.000"	"97.7398"	"34649"	"34649"	"34631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"18.2"	""	"23.8"	""	"38.0"	""	"39.0"	"39.9"	""	"845"	"15"	"36.000"	"29.000"	"1.4548784574751"	"17"	"0.006267"	"0.07686"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"746.38580"	"1491.76433"	"1491.76409"	"0.16"	"0.00012"	"10/110"	"10"	"110"	"5784705.01104736"	"HCD"	"MS2"	"0.3357262"	"204.7"	"100.000"	"71.3265"	"24008"	"24008"	"23996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"312.1"	""	"232.2"	""	"238.8"	""	"362.8"	""	"378.6"	"420.5"	""	"858"	"55"	"36.000"	"29.000"	"0.000129555928805246"	"22"	"0"	"2.843E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"746.38593"	"1491.76457"	"1491.76409"	"0.33"	"0.00024"	"8/110"	"8"	"110"	"5812632.62780762"	"HCD"	"MS2"	"0.4558166"	"213.1"	"100.000"	"71.2208"	"23935"	"23935"	"23918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.6"	""	"243.7"	""	"248.5"	""	"381.8"	"1.8"	"403.6"	"417.9"	""	"868"	"53"	"36.000"	"29.000"	"0.000227766437748402"	"21"	"0"	"9.411E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"746.38641"	"1491.76555"	"1491.76409"	"0.98"	"0.00073"	"10/110"	"10"	"110"	"807508.003723145"	"HCD"	"MS2"	"5.222045"	"40.8"	"100.000"	"71.0245"	"23886"	"23886"	"23863"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"47.9"	""	"53.0"	""	"70.0"	"1.1"	"75.9"	"79.6"	""	"872"	"49"	"36.000"	"29.000"	"0.000541360406110291"	"26"	"0"	"9.606E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"746.38641"	"1491.76555"	"1491.76409"	"0.98"	"0.00073"	"9/110"	"9"	"110"	"1377459.86907959"	"HCD"	"MS2"	"1.185494"	"63.3"	"100.000"	"71.5179"	"24055"	"24055"	"24037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"66.7"	""	"91.3"	""	"110.0"	""	"123.5"	"121.6"	""	"872"	"40"	"36.000"	"29.000"	"0.00415419127514312"	"19"	"0"	"5.577E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQFDADELR"	"[K].tPAQFDADELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"746.38647"	"1491.76567"	"1491.76409"	"1.06"	"0.00079"	"10/110"	"10"	"110"	"997030.483276367"	"HCD"	"MS2"	"17.92684"	"49.1"	"100.000"	"70.9327"	"23817"	"23817"	"23794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.5"	""	"65.4"	""	"56.6"	""	"90.2"	""	"88.7"	"97.6"	""	"878"	"54"	"36.000"	"29.000"	"0.000158294024286501"	"23"	"0"	"9.364E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"497.93909"	"1491.80271"	"1491.80384"	"-0.76"	"-0.00038"	"15/102"	"15"	"102"	"803690.037658691"	"HCD"	"MS2"	"25.83751"	"18.5"	"100.000"	"82.0537"	"28355"	"28355"	"28334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"20.2"	""	"24.9"	""	"34.9"	"0.8"	"34.4"	"35.6"	""	"1039"	"49"	"37.000"	"30.000"	"0.000585579078483179"	"24"	"0"	"3.089E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9136"	"0.0000"	"1"	"1"	"1"	"746.40515"	"1491.80303"	"1491.80384"	"-0.55"	"-0.00041"	"10/102"	"10"	"102"	"1566916.91815186"	"HCD"	"MS2"	"5.463934"	"84.4"	"100.000"	"82.0771"	"28337"	"28337"	"28327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.0"	""	"142.8"	""	"139.1"	""	"76.5"	"1.0"	"157.1"	"169.0"	""	"1036"	"81"	"37.000"	"30.000"	"4.43945603829331E-07"	"25"	"0"	"1.243E-08"	"1.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"497.93921"	"1491.80307"	"1491.80384"	"-0.52"	"-0.00026"	"13/102"	"13"	"102"	"808842.55847168"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"81.7442"	"28230"	"28230"	"28200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"19.6"	""	"20.0"	""	"23.9"	""	"26.0"	"26.4"	""	"1036"	"53"	"37.000"	"30.000"	"0.000245092352142047"	"27"	"0"	"2.428E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9136"	"0.0000"	"1"	"1"	"1"	"746.40521"	"1491.80315"	"1491.80384"	"-0.47"	"-0.00035"	"10/102"	"10"	"102"	"3867517.69464111"	"HCD"	"MS2"	"0.5008606"	"179.8"	"100.000"	"81.8968"	"28292"	"28292"	"28275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.8"	""	"306.2"	""	"281.4"	""	"171.9"	""	"330.0"	"363.9"	""	"1036"	"81"	"37.000"	"30.000"	"4.0768971906206E-07"	"25"	"0"	"1.255E-07"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"497.93933"	"1491.80344"	"1491.80384"	"-0.27"	"-0.00013"	"14/102"	"14"	"102"	"887398.489624023"	"HCD"	"MS2"	"12.13782"	"18.6"	"100.000"	"81.9202"	"28273"	"28273"	"28247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"24.3"	""	"26.2"	""	"29.8"	""	"32.4"	"42.9"	""	"1035"	"72"	"37.000"	"30.000"	"2.91682486889932E-06"	""	"0"	"3.264E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"746.40546"	"1491.80364"	"1491.80384"	"-0.14"	"-0.00010"	"10/102"	"10"	"102"	"1211269.56793213"	"HCD"	"MS2"	"0"	"60.3"	"100.000"	"81.5990"	"28170"	"28170"	"28152"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.1"	""	"108.2"	""	"92.9"	""	"59.1"	""	"115.3"	"115.7"	""	"1029"	"81"	"37.000"	"30.000"	"4.22070869557692E-07"	"24"	"0"	"7.946E-09"	"1.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7234"	"0.0000"	"1"	"1"	"1"	"497.93942"	"1491.80371"	"1491.80384"	"-0.09"	"-0.00004"	"12/102"	"12"	"102"	"684412.94543457"	"HCD"	"MS2"	"6.425131"	"14.0"	"100.000"	"81.6156"	"28149"	"28149"	"28128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.0"	""	"14.6"	""	"20.0"	""	"22.2"	""	"29.3"	"30.1"	""	"1029"	"47"	"37.000"	"30.000"	"0.00107000394551485"	"28"	"0"	"7.182E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8765"	"0.0000"	"1"	"1"	"1"	"746.40558"	"1491.80388"	"1491.80384"	"0.02"	"0.00002"	"10/102"	"10"	"102"	"3973267.54467773"	"HCD"	"MS2"	"0"	"96.7"	"100.000"	"81.7795"	"28216"	"28216"	"28199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.4"	""	"165.0"	""	"156.1"	""	"99.7"	"0.2"	"167.3"	"197.8"	""	"1022"	"81"	"37.000"	"30.000"	"4.00332547453534E-07"	"27"	"0"	"3.205E-08"	"1.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"746.40570"	"1491.80412"	"1491.80384"	"0.19"	"0.00014"	"10/102"	"10"	"102"	"821173.387207031"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"81.4956"	"28101"	"28101"	"28081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.1"	""	"85.5"	""	"66.2"	""	"45.4"	""	"83.1"	"91.8"	""	"1022"	"78"	"37.000"	"30.000"	"7.87808931457224E-07"	"24"	"0"	"6.811E-08"	"1.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAMDGTEGLVR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9067"	"0.0000"	"1"	"1"	"1"	"746.40588"	"1491.80449"	"1491.80384"	"0.43"	"0.00032"	"10/102"	"10"	"102"	"1094795.60760498"	"HCD"	"MS2"	"10.37072"	"58.4"	"100.000"	"82.1944"	"28413"	"28413"	"28398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.8"	""	"93.9"	""	"90.9"	""	"61.8"	""	"113.5"	"120.8"	""	"1027"	"75"	"37.000"	"30.000"	"1.54717859341958E-06"	"24"	"0"	"1.526E-07"	"1.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNNNLPIPER"	"[R].vPNNNLPIPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"746.42462"	"1491.84197"	"1491.84809"	"-4.11"	"-0.00306"	"7/96"	"7"	"96"	"879995.833618164"	"HCD"	"MS2"	"42.00286"	"38.6"	"100.000"	"72.4677"	"24467"	"24467"	"24448"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.5"	""	"55.4"	""	"51.7"	""	"67.2"	"1.9"	"70.0"	"73.5"	""	"1049"	"27"	"37.000"	"30.000"	"0.101565332009"	"15"	"0.0001686"	"0.001397"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNNNLPIPER"	"[R].vPNNNLPIPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"746.42682"	"1491.84636"	"1491.84809"	"-1.16"	"-0.00087"	"6/96"	"6"	"96"	"369161.274291992"	"HCD"	"MS2"	"17.20471"	"21.7"	"100.000"	"72.6555"	"24514"	"24514"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"30.2"	""	"31.2"	""	"33.2"	""	"40.8"	"42.4"	""	"1035"	"13"	"37.000"	"30.000"	"2.53460539023171"	"15"	"0.009084"	"0.1173"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNNNLPIPER"	"[R].vPNNNLPIPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.42749"	"1491.84770"	"1491.84809"	"-0.26"	"-0.00019"	"7/96"	"7"	"96"	"371082.214294434"	"HCD"	"MS2"	"8.451606"	"22.9"	"100.000"	"72.7654"	"24588"	"24588"	"24568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.0"	""	"37.4"	""	"29.3"	""	"37.8"	"1.5"	"35.0"	"44.8"	""	"1017"	"30"	"37.000"	"30.000"	"0.0526369791756446"	"14"	"0.0001991"	"0.002074"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNNNLPIPER"	"[R].vPNNNLPIPER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"A2RUV9"	"Adipocyte enhancer-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Aebp1 PE=2 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"746.43933"	"1491.87139"	"1491.84809"	"15.61"	"0.01165"	"7/96"	"7"	"96"	"1070609.56726074"	"HCD"	"MS2"	"31.38465"	"48.7"	"100.000"	"72.3127"	"24375"	"24375"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.3"	""	"72.0"	""	"58.6"	""	"69.8"	"1.8"	"105.6"	"93.3"	""	"894"	"28"	"36.000"	"29.000"	"0.0664213232102292"	"17"	"0.004275"	"0.05042"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEMESAVK"	"[K].lQEMESAVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"498.28613"	"1492.84385"	"1492.84454"	"-0.46"	"-0.00023"	"9/84"	"9"	"84"	"613087.733459473"	"HCD"	"MS2"	"32.26565"	"24.3"	"100.000"	"85.0722"	"29573"	"29573"	"29545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"30.4"	""	"36.1"	""	"56.6"	""	"34.3"	"38.7"	""	"978"	"5"	"36.000"	"29.000"	"15.8237298238588"	"17"	"0.004234"	"0.048"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEMESAVK"	"[K].lQEMESAVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.4750"	"0.0000"	"1"	"1"	"1"	"746.92584"	"1492.84441"	"1492.84454"	"-0.09"	"-0.00006"	"8/84"	"8"	"84"	"556763.929870605"	"HCD"	"MS2"	"0"	"45.0"	"100.000"	"84.6297"	"29366"	"29366"	"29347"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.8"	""	"50.4"	""	"50.1"	""	"138.6"	"0.3"	"75.0"	"63.8"	""	"968"	"40"	"36.000"	"29.000"	"0.00485115735229703"	""	"0"	"3.966E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEMESAVK"	"[K].lQEMESAVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"746.92584"	"1492.84441"	"1492.84454"	"-0.09"	"-0.00006"	"8/84"	"8"	"84"	"642071.622131348"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"84.9415"	"29490"	"29490"	"29472"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"55.2"	""	"53.2"	""	"160.6"	"0.1"	"86.7"	"74.6"	""	"968"	"32"	"36.000"	"29.000"	"0.0337167232829612"	""	"0"	"0.0001679"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEMESAVK"	"[K].lQEMESAVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.2903"	"0.0000"	"1"	"1"	"1"	"746.92621"	"1492.84514"	"1492.84454"	"0.40"	"0.00030"	"7/84"	"7"	"84"	"579854.074401855"	"HCD"	"MS2"	"0"	"49.8"	"100.000"	"84.6338"	"29396"	"29396"	"29377"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.6"	""	"51.5"	""	"52.5"	""	"161.1"	"0.1"	"74.5"	"77.4"	""	"988"	"31"	"36.000"	"29.000"	"0.0432241984962354"	""	"0"	"0.0001084"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEMESAVK"	"[K].lQEMESAVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"746.92639"	"1492.84551"	"1492.84454"	"0.65"	"0.00049"	"8/84"	"8"	"84"	"776045.987792969"	"HCD"	"MS2"	"0"	"59.8"	"100.000"	"84.9318"	"29516"	"29516"	"29499"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.8"	""	"65.7"	""	"63.5"	""	"174.5"	"0.9"	"114.4"	"96.4"	""	"988"	"24"	"36.000"	"29.000"	"0.181437456446054"	"29"	"0"	"0.000254"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"746.93237"	"1492.85747"	"1492.86229"	"-3.23"	"-0.00241"	"15/84"	"15"	"84"	"874971.741760254"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"63.7671"	"20943"	"20943"	"20921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"76.3"	""	"73.4"	""	"197.3"	""	"197.7"	"137.9"	""	"904"	"58"	"36.000"	"29.000"	"7.36441806753154E-05"	"28"	"0"	"8.393E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7321"	"0.0000"	"1"	"1"	"1"	"746.93243"	"1492.85759"	"1492.86229"	"-3.15"	"-0.00235"	"15/84"	"15"	"84"	"1240180.68658447"	"HCD"	"MS2"	"0"	"103.7"	"100.000"	"63.8073"	"20927"	"20927"	"20908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"96.8"	""	"97.7"	""	"271.3"	"0.6"	"272.1"	"184.7"	""	"904"	"56"	"36.000"	"29.000"	"0.00012477811910116"	""	"0"	"6.305E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"498.29144"	"1492.85978"	"1492.86229"	"-1.69"	"-0.00084"	"9/84"	"9"	"84"	"748660.772277832"	"HCD"	"MS2"	"21.49796"	"30.2"	"100.000"	"64.4112"	"21203"	"21203"	"21179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	""	"32.9"	""	"28.1"	""	"67.3"	"0.1"	"68.5"	"61.7"	""	"919"	"37"	"36.000"	"29.000"	"0.00826581185501678"	"24"	"9.9E-05"	"0.0007431"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"498.29169"	"1492.86051"	"1492.86229"	"-1.20"	"-0.00060"	"7/84"	"7"	"84"	"2787797.18060303"	"HCD"	"MS2"	"10.9647"	"87.9"	"100.000"	"64.1153"	"21083"	"21083"	"21072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"75.1"	""	"69.6"	""	"209.2"	"0.8"	"252.1"	"169.2"	""	"904"	"42"	"36.000"	"29.000"	"0.00262505516719633"	"28"	"9.9E-05"	"0.0004219"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7115"	"0.0000"	"1"	"1"	"1"	"498.29172"	"1492.86060"	"1492.86229"	"-1.14"	"-0.00057"	"7/84"	"7"	"84"	"1892824.0144043"	"HCD"	"MS2"	"34.75767"	"63.6"	"100.000"	"63.8462"	"20943"	"20943"	"20920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"62.6"	""	"63.8"	""	"148.6"	""	"171.2"	"120.0"	""	"904"	"52"	"36.000"	"29.000"	"0.000257121524741416"	""	"0"	"0.0003537"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7736"	"0.0000"	"1"	"1"	"1"	"746.93396"	"1492.86064"	"1492.86229"	"-1.11"	"-0.00083"	"9/84"	"9"	"84"	"1029854.90283203"	"HCD"	"MS2"	"0"	"94.1"	"100.000"	"64.3193"	"21165"	"21165"	"21153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.9"	""	"69.9"	""	"86.2"	""	"228.3"	"1.1"	"257.1"	"193.7"	""	"904"	"53"	"36.000"	"29.000"	"0.000238307897363116"	"28"	"0"	"2.772E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"498.29202"	"1492.86151"	"1492.86229"	"-0.52"	"-0.00026"	"7/84"	"7"	"84"	"1720853.3828125"	"HCD"	"MS2"	"30.0206"	"59.4"	"100.000"	"63.8198"	"20964"	"20964"	"20946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.8"	""	"57.9"	""	"59.8"	""	"144.2"	""	"150.8"	"112.3"	""	"911"	"48"	"36.000"	"29.000"	"0.000778911976023626"	"28"	"0"	"0.000164"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"746.93445"	"1492.86162"	"1492.86229"	"-0.45"	"-0.00034"	"9/84"	"9"	"84"	"2626151.38562012"	"HCD"	"MS2"	"0"	"203.2"	"100.000"	"64.1006"	"21045"	"21045"	"21029"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.5"	""	"161.9"	""	"170.4"	""	"502.2"	""	"566.3"	"407.3"	""	"911"	"68"	"36.000"	"29.000"	"7.42144342867395E-06"	"29"	"0"	"5.885E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.6905"	"0.0000"	"1"	"1"	"1"	"498.29208"	"1492.86170"	"1492.86229"	"-0.40"	"-0.00020"	"9/84"	"9"	"84"	"2551675.06085205"	"HCD"	"MS2"	"7.803926"	"81.3"	"100.000"	"64.1556"	"21066"	"21066"	"21060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.7"	""	"73.8"	""	"75.4"	""	"195.2"	""	"221.4"	"164.3"	""	"911"	"42"	"36.000"	"29.000"	"0.00284111217562242"	"28"	"0.0001686"	"0.001045"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLESTTLADK"	"[K].gLESTTLADk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7679"	"0.0000"	"1"	"1"	"1"	"746.93451"	"1492.86174"	"1492.86229"	"-0.37"	"-0.00028"	"15/84"	"15"	"84"	"2829331.10113525"	"HCD"	"MS2"	"0"	"218.6"	"100.000"	"64.0490"	"21057"	"21057"	"21047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.0"	""	"181.8"	""	"192.7"	""	"537.6"	"0.8"	"589.4"	"445.0"	""	"911"	"56"	"36.000"	"29.000"	"0.000122599410318871"	"29"	"0"	"1.182E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGDVDAVLSR"	"[R].fADGDVDAVLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"747.39313"	"1493.77898"	"1493.77974"	"-0.51"	"-0.00038"	"7/104"	"7"	"104"	"257080.879760742"	"HCD"	"MS2"	"48.49128"	"20.5"	"100.000"	"98.5567"	"34980"	"34980"	"34954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"25.8"	""	"24.0"	""	"36.2"	"1.3"	"32.8"	"43.2"	""	"870"	"26"	"36.000"	"29.000"	"0.116543822129628"	"17"	"0.001049"	"0.008914"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FADGDVDAVLSR"	"[R].fADGDVDAVLSR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"P28037"	"Cytosolic 10-formyltetrahydrofolate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh1l1 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"747.39484"	"1493.78240"	"1493.77974"	"1.78"	"0.00133"	"6/104"	"6"	"104"	"235495.965576172"	"HCD"	"MS2"	"53.52605"	"19.4"	"100.000"	"98.6472"	"35046"	"35046"	"35025"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"27.1"	""	"28.1"	""	"32.8"	""	"30.6"	"34.8"	""	"866"	"21"	"36.000"	"29.000"	"0.318044504912031"	"15"	"0.001951"	"0.0172"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFSQQADLSR"	"[R].dVFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"747.89087"	"1494.77446"	"1494.77499"	"-0.35"	"-0.00026"	"7/110"	"7"	"110"	"593457.484313965"	"HCD"	"MS2"	"48.13837"	"51.4"	"100.000"	"65.7812"	"21728"	"21728"	"21707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.8"	""	"71.4"	""	"77.3"	""	"76.1"	"1.1"	"93.5"	"94.3"	""	"853"	"47"	"36.000"	"29.000"	"0.000823984487207718"	"24"	"0"	"1.471E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVFSQQADLSR"	"[R].dVFSQQADLSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"Q63556"	"Serine protease inhibitor A3M (Fragment) OS=Rattus norvegicus OX=10116 GN=Serpina3m PE=2 SV=1"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"747.89117"	"1494.77507"	"1494.77499"	"0.06"	"0.00004"	"7/110"	"7"	"110"	"359335.368530273"	"HCD"	"MS2"	"49.36474"	"32.3"	"100.000"	"65.8561"	"21792"	"21792"	"21769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.7"	""	"41.3"	""	"44.5"	""	"55.3"	"1.5"	"61.2"	"52.4"	""	"858"	"34"	"36.000"	"29.000"	"0.0164989874497457"	"24"	"9.9E-05"	"0.0008749"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RAPFDLFENR"	"[R].rAPFDLFEnR.[K]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.93457"	"1494.78916"	"1494.79024"	"-0.73"	"-0.00036"	"5/96"	"5"	"96"	"355240.018859863"	"HCD"	"MS2"	"25.04004"	"12.6"	"100.000"	"91.5332"	"32175"	"32175"	"32153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"15.8"	""	"17.7"	""	"26.2"	""	"20.4"	"19.6"	""	"947"	"17"	"36.000"	"29.000"	"0.912683046395908"	"14"	"0.003818"	"0.04167"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEGMVVADK"	"[R].aTEGmVVADk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.2308"	"0.0000"	"1"	"1"	"1"	"747.91486"	"1494.82244"	"1494.82380"	"-0.91"	"-0.00068"	"8/86"	"8"	"86"	"164059.176391602"	"HCD"	"MS2"	"100"	"13.1"	"100.000"	"42.0094"	"12074"	"12074"	"12044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"13.3"	""	"17.1"	""	"26.0"	""	"29.3"	"25.7"	""	"975"	"13"	"36.000"	"29.000"	"2.20279772882775"	"23"	"0.00329"	"0.03554"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEGMVVADK"	"[R].aTEGmVVADk.[N]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"Q9JHW0"	"Proteasome subunit beta type-7 OS=Rattus norvegicus OX=10116 GN=Psmb7 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"747.91522"	"1494.82317"	"1494.82380"	"-0.42"	"-0.00032"	"7/86"	"7"	"86"	"197725.844299316"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"42.3268"	"12237"	"12237"	"12215"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"13.8"	""	"14.2"	""	"39.9"	""	"22.3"	"30.0"	""	"985"	"28"	"36.000"	"29.000"	"0.0738594781484919"	"22"	"0.002286"	"0.02163"	"0.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEPADYK"	"[R].sQVEPADYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"747.91522"	"1494.82317"	"1494.82043"	"1.83"	"0.00137"	"7/90"	"7"	"90"	"497962.227111816"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"46.3137"	"13859"	"13859"	"13846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	""	"52.3"	""	"48.6"	""	"68.9"	""	"94.6"	"82.3"	""	"985"	"40"	"36.000"	"29.000"	"0.00528939785578063"	""	"0.0001686"	"0.001104"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEPADYK"	"[R].sQVEPADYk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"P53812"	"Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus OX=10116 GN=Pitpnb PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"747.91541"	"1494.82353"	"1494.82043"	"2.08"	"0.00155"	"11/90"	"11"	"90"	"464169.857849121"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"46.5648"	"13925"	"13925"	"13915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.9"	""	"48.2"	""	"58.3"	""	"60.6"	""	"93.8"	"84.3"	""	"976"	"30"	"36.000"	"29.000"	"0.0463895139304265"	"25"	"0.0001991"	"0.002004"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEEGEAFAR"	"[K].kEEGEAFAR.[E]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"498.94873"	"1494.83164"	"1494.83166"	"-0.02"	"-0.00001"	"7/86"	"7"	"86"	"5353637.21679688"	"HCD"	"MS2"	"19.9505"	"283.6"	"100.000"	"33.6344"	"8683"	"8683"	"8664"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.7"	""	"346.6"	""	"374.6"	""	"471.3"	""	"543.6"	"568.7"	""	"972"	"8"	"36.000"	"29.000"	"7.25498083055393"	"13"	"0.00212"	"0.01913"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQLGESVK"	"[R].eFQLGESVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"747.93152"	"1494.85576"	"1494.85682"	"-0.71"	"-0.00053"	"8/88"	"8"	"88"	"361847.567504883"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"84.3274"	"29244"	"29244"	"29225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.0"	""	"46.5"	""	"36.1"	""	"65.0"	""	"77.8"	"73.9"	""	"885"	"50"	"36.000"	"29.000"	"0.0004245347794458"	"24"	"0"	"1.027E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFQLGESVK"	"[R].eFQLGESVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"747.93164"	"1494.85600"	"1494.85682"	"-0.54"	"-0.00041"	"7/88"	"7"	"88"	"347261.297180176"	"HCD"	"MS2"	"9.697553"	"34.8"	"100.000"	"84.2901"	"29257"	"29257"	"29235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"37.8"	""	"41.0"	""	"55.4"	""	"78.4"	"78.2"	""	"880"	"40"	"36.000"	"29.000"	"0.00405931427948095"	"22"	"0"	"8.774E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLMNEMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"748.37500"	"1495.74272"	"1495.74462"	"-1.26"	"-0.00095"	"11/102"	"11"	"102"	"239707.491027832"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"99.7165"	"35477"	"35477"	"35450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"24.3"	""	"25.1"	""	"24.5"	""	"36.5"	"32.2"	""	"658"	"21"	"35.000"	"28.000"	"0.292547167775265"	"19"	"0.004213"	"0.04777"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLMNEMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"748.37555"	"1495.74382"	"1495.74462"	"-0.53"	"-0.00040"	"9/102"	"9"	"102"	"391692.575500488"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"99.6575"	"35425"	"35425"	"35398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"34.6"	""	"33.8"	""	"30.3"	""	"62.2"	"58.1"	""	"649"	"64"	"35.000"	"28.000"	"1.3970588510456E-05"	"21"	"0"	"5.045E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLMNEMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"748.37567"	"1495.74407"	"1495.74462"	"-0.37"	"-0.00027"	"9/102"	"9"	"102"	"797318.48223877"	"HCD"	"MS2"	"2.014479"	"45.4"	"100.000"	"99.9478"	"35543"	"35543"	"35524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.8"	""	"53.2"	""	"50.8"	""	"54.6"	""	"105.9"	"113.4"	""	"649"	"68"	"35.000"	"28.000"	"4.82186115922134E-06"	"19"	"0"	"5.504E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLMNEMR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"748.37573"	"1495.74419"	"1495.74462"	"-0.29"	"-0.00021"	"9/102"	"9"	"102"	"673320.028015137"	"HCD"	"MS2"	"5.147387"	"39.1"	"100.000"	"100.0298"	"35604"	"35604"	"35586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"53.2"	""	"51.3"	""	"49.9"	"0.3"	"94.4"	"85.5"	""	"649"	"55"	"35.000"	"28.000"	"0.000109198004262347"	"21"	"0"	"1.231E-06"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"748.37976"	"1495.75224"	"1495.75900"	"-4.52"	"-0.00338"	"8/98"	"8"	"98"	"238675.104187012"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"59.8013"	"19301"	"19301"	"19274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"22.9"	""	"21.1"	""	"27.1"	""	"39.3"	"33.6"	""	"729"	"39"	"35.000"	"28.000"	"0.00412759932399361"	"20"	"9.9E-05"	"0.0005313"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"748.38226"	"1495.75725"	"1495.75900"	"-1.17"	"-0.00088"	"8/98"	"8"	"98"	"370826.047119141"	"HCD"	"MS2"	"10.31605"	"24.5"	"100.000"	"59.6980"	"19292"	"19292"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"28.0"	""	"37.6"	""	"46.2"	""	"38.4"	"44.2"	""	"772"	"57"	"35.000"	"28.000"	"8.60175967618337E-05"	"22"	"0"	"9.642E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"748.38251"	"1495.75774"	"1495.75900"	"-0.85"	"-0.00063"	"17/98"	"17"	"98"	"624149.102966309"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"60.1125"	"19427"	"19427"	"19406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.1"	""	"40.6"	""	"41.7"	""	"56.4"	"0.8"	"69.9"	"85.6"	""	"773"	"60"	"35.000"	"28.000"	"3.81197021196463E-05"	"28"	"0"	"2.326E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAFGGETDEATR"	"[K].iAFGGETDEATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"P30839"	"Fatty aldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh3a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"748.38354"	"1495.75981"	"1495.75900"	"0.54"	"0.00041"	"10/98"	"10"	"98"	"527167.063049316"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"60.0087"	"19418"	"19418"	"19397"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.2"	""	"37.5"	""	"51.7"	""	"55.3"	"2.2"	"58.5"	"62.4"	""	"783"	"50"	"35.000"	"28.000"	"0.000356231046235527"	"22"	"0"	"2.73E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGDFDPGSK"	"[R].sQGDFDPGSk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"748.39270"	"1495.77812"	"1495.77929"	"-0.78"	"-0.00058"	"9/104"	"9"	"104"	"3726858.31506348"	"HCD"	"MS2"	"19.56648"	"325.6"	"100.000"	"45.5069"	"13498"	"13498"	"13480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"359.7"	""	"417.4"	""	"403.9"	""	"532.7"	""	"667.6"	"715.4"	""	"909"	"51"	"36.000"	"29.000"	"0.000358536923457633"	"26"	"0"	"5.954E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGDFDPGSK"	"[R].sQGDFDPGSk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"748.39288"	"1495.77849"	"1495.77929"	"-0.54"	"-0.00040"	"9/104"	"9"	"104"	"1135503.77044678"	"HCD"	"MS2"	"0"	"92.4"	"100.000"	"45.2029"	"13375"	"13375"	"13346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.6"	""	"110.3"	""	"87.1"	""	"153.0"	""	"205.2"	"217.8"	""	"907"	"52"	"36.000"	"29.000"	"0.00026889163469703"	"25"	"9.9E-05"	"0.0008392"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGDFDPGSK"	"[R].sQGDFDPGSk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"748.39313"	"1495.77898"	"1495.77929"	"-0.21"	"-0.00016"	"9/104"	"9"	"104"	"3555100.33013916"	"HCD"	"MS2"	"7.31832"	"283.1"	"100.000"	"45.2064"	"13410"	"13410"	"13392"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"306.6"	""	"346.3"	""	"308.5"	""	"472.6"	""	"612.2"	"652.4"	""	"901"	"45"	"36.000"	"29.000"	"0.00155487254570803"	"26"	"0.0001991"	"0.002379"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQGDFDPGSK"	"[R].sQGDFDPGSk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"748.39355"	"1495.77983"	"1495.77929"	"0.36"	"0.00027"	"6/104"	"6"	"104"	"713256.807617188"	"HCD"	"MS2"	"0"	"63.6"	"100.000"	"44.9143"	"13291"	"13291"	"13267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.1"	""	"78.3"	""	"64.7"	""	"115.7"	"1.3"	"132.6"	"142.2"	""	"898"	"43"	"36.000"	"29.000"	"0.00206655201538029"	"27"	"0.0001991"	"0.00468"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"748.40283"	"1495.79839"	"1495.79941"	"-0.68"	"-0.00051"	"8/106"	"8"	"106"	"621012.214416504"	"HCD"	"MS2"	"0"	"29.6"	"100.000"	"96.2349"	"34040"	"34040"	"34021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.3"	""	"49.1"	""	"43.6"	""	"39.4"	"1.4"	"53.4"	"48.7"	""	"949"	"64"	"36.000"	"29.000"	"1.92857359688894E-05"	"23"	"0"	"0.0002567"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"748.40289"	"1495.79851"	"1495.79941"	"-0.60"	"-0.00045"	"8/106"	"8"	"106"	"243778.878601074"	"HCD"	"MS2"	"11.49177"	"16.6"	"100.000"	"96.6828"	"34252"	"34252"	"34235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"22.9"	""	"23.5"	""	"24.0"	""	"30.4"	"33.3"	""	"942"	"51"	"36.000"	"29.000"	"0.000360596001855202"	"20"	"0"	"0.000221"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"748.40308"	"1495.79888"	"1495.79941"	"-0.36"	"-0.00027"	"8/106"	"8"	"106"	"333605.866271973"	"HCD"	"MS2"	"7.387198"	"16.4"	"100.000"	"96.0498"	"33998"	"33998"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"24.5"	""	"23.1"	""	"25.7"	""	"31.6"	"26.5"	""	"942"	"67"	"36.000"	"29.000"	"8.89243925424355E-06"	"23"	"0"	"2.722E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITK.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40326"	"1495.79924"	"1495.79941"	"-0.11"	"-0.00008"	"6/106"	"6"	"106"	"137284.380737305"	"HCD"	"MS2"	"17.48391"	"4.6"	"100.000"	"102.5089"	"36605"	"36605"	"36582"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.9"	""	"7.7"	""	"7.4"	""	"8.6"	""	"6.7"	"6.1"	""	"946"	"29"	"36.000"	"29.000"	"0.0603755556567765"	"14"	"0.0005161"	"0.006519"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"748.40326"	"1495.79924"	"1495.79941"	"-0.11"	"-0.00008"	"8/106"	"8"	"106"	"619415.978149414"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"96.3361"	"34113"	"34113"	"34100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.0"	""	"53.2"	""	"43.1"	""	"48.3"	""	"45.2"	"48.3"	""	"946"	"66"	"36.000"	"29.000"	"1.08108823399658E-05"	"23"	"0"	"7.221E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITK.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40338"	"1495.79949"	"1495.79941"	"0.05"	"0.00004"	"7/106"	"7"	"106"	"271913.814880371"	"HCD"	"MS2"	"23.09499"	"12.9"	"100.000"	"102.5989"	"36617"	"36617"	"36593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"16.3"	""	"13.1"	""	"23.3"	""	"28.2"	"23.3"	""	"953"	"37"	"36.000"	"29.000"	"0.00910045077706813"	"15"	"0.0001991"	"0.002281"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"748.40338"	"1495.79949"	"1495.79941"	"0.05"	"0.00004"	"8/106"	"8"	"106"	"240669.869628906"	"HCD"	"MS2"	"35.52596"	"14.5"	"100.000"	"95.9484"	"33925"	"33925"	"33897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"21.9"	""	"21.5"	""	"20.2"	""	"31.7"	"24.5"	""	"953"	"66"	"36.000"	"29.000"	"1.12218098377645E-05"	"27"	"0"	"9.024E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITK.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"748.40350"	"1495.79973"	"1495.79941"	"0.21"	"0.00016"	"8/106"	"8"	"106"	"208884.963195801"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"102.8026"	"36721"	"36721"	"36705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"18.4"	""	"13.2"	""	"17.5"	""	"17.9"	"21.1"	""	"934"	"36"	"36.000"	"29.000"	"0.0106983519384255"	"22"	"0"	"6.824E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"499.27145"	"1495.79981"	"1495.79941"	"0.27"	"0.00013"	"9/106"	"9"	"106"	"379099.275939941"	"HCD"	"MS2"	"5.12572"	"19.0"	"100.000"	"96.2095"	"34030"	"34030"	"34013"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"28.1"	""	"27.3"	""	"29.7"	""	"30.5"	"34.7"	""	"934"	"21"	"36.000"	"29.000"	"0.355072371331065"	"16"	"0.0001991"	"0.005572"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].FPNAEFAEITk.[L]"	"K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"748.40387"	"1495.80046"	"1495.79941"	"0.70"	"0.00053"	"8/106"	"8"	"106"	"196623.528625488"	"HCD"	"MS2"	"7.002707"	"13.7"	"100.000"	"96.6547"	"34210"	"34210"	"34194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.0"	""	"24.0"	""	"22.8"	""	"16.4"	""	"23.5"	"25.8"	""	"933"	"67"	"36.000"	"29.000"	"1.01590160880275E-05"	"25"	"9.9E-05"	"0.000482"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPNAEFAEITK.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.40466"	"1495.80205"	"1495.79941"	"1.76"	"0.00132"	"6/106"	"6"	"106"	"116766.651916504"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"102.2662"	"36484"	"36484"	"36459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.4"	""	"3.4"	""	"7.5"	""	"5.2"	""	"7.5"	"8.5"	""	"951"	"40"	"36.000"	"29.000"	"0.00462541304905947"	"15"	"0.0001991"	"0.002397"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMDWVLK"	"[R].tEmDWVLk.[H]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"748.41498"	"1495.82268"	"1495.82307"	"-0.26"	"-0.00020"	"10/62"	"10"	"62"	"316612.545471191"	"HCD"	"MS2"	"7.176897"	"28.2"	"100.000"	"91.9146"	"32294"	"32294"	"32271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"29.7"	""	"31.7"	""	"76.1"	"1.1"	"49.6"	"45.9"	""	"906"	"25"	"36.000"	"29.000"	"0.147264545715602"	"19"	"0.006305"	"0.07824"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMDWVLK"	"[R].tEmDWVLk.[H]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"748.41559"	"1495.82390"	"1495.82307"	"0.55"	"0.00041"	"12/62"	"12"	"62"	"754374.857116699"	"HCD"	"MS2"	"2.934035"	"59.4"	"100.000"	"91.6030"	"32167"	"32167"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.3"	""	"57.9"	""	"62.7"	""	"171.2"	""	"101.7"	"99.8"	""	"895"	"32"	"36.000"	"29.000"	"0.0260491189952465"	"26"	"0.006343"	"0.07895"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMDWVLK"	"[R].tEmDWVLk.[H]"	"N-Term(TMT6plex); M3(Oxidation); K8(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.6486"	"0.0000"	"1"	"1"	"1"	"748.41571"	"1495.82414"	"1495.82307"	"0.72"	"0.00054"	"7/62"	"7"	"62"	"681251.957275391"	"HCD"	"MS2"	"12.46604"	"53.1"	"100.000"	"91.4896"	"32157"	"32157"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.6"	""	"50.1"	""	"65.3"	""	"164.1"	""	"89.4"	"80.3"	""	"895"	"37"	"36.000"	"29.000"	"0.00860583548687296"	"28"	"0.0001991"	"0.005457"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLGEELFK"	"[K].dSLGEELFk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3659"	"0.0000"	"1"	"1"	"1"	"748.42346"	"1495.83965"	"1495.84083"	"-0.79"	"-0.00059"	"7/74"	"7"	"74"	"587262.02166748"	"HCD"	"MS2"	"4.398277"	"52.8"	"100.000"	"103.2180"	"36887"	"36887"	"36873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.5"	""	"66.7"	""	"67.0"	""	"85.0"	""	"102.4"	"103.6"	""	"825"	"41"	"36.000"	"29.000"	"0.0032917280849804"	""	"0"	"0.0002586"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYDLTPVDK"	"[K].sYDLTPVDk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"748.42358"	"1495.83989"	"1495.84083"	"-0.63"	"-0.00047"	"6/78"	"6"	"78"	"266173.501403809"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"74.9223"	"25466"	"25466"	"25443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"27.0"	""	"30.5"	""	"41.9"	"0.5"	"49.1"	"48.6"	""	"822"	"29"	"36.000"	"29.000"	"0.0518611116716766"	"18"	"0.0005161"	"0.006629"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLGEELFK"	"[K].dSLGEELFk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"748.42377"	"1495.84026"	"1495.84083"	"-0.38"	"-0.00029"	"8/74"	"8"	"74"	"779504.957824707"	"HCD"	"MS2"	"31.06883"	"62.3"	"100.000"	"102.9410"	"36777"	"36777"	"36762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.9"	""	"80.3"	""	"88.9"	""	"100.3"	""	"107.4"	"109.4"	""	"819"	"38"	"36.000"	"29.000"	"0.00685889107732826"	""	"0"	"4.967E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYDLTPVDK"	"[K].sYDLTPVDk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"499.28497"	"1495.84037"	"1495.84083"	"-0.31"	"-0.00015"	"9/78"	"9"	"78"	"523438.210327148"	"HCD"	"MS2"	"29.96174"	"24.2"	"100.000"	"74.6355"	"25319"	"25319"	"25298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.0"	""	"34.5"	""	"28.9"	""	"39.8"	""	"46.1"	"46.1"	""	"819"	"19"	"36.000"	"29.000"	"0.574452212018121"	"16"	"0.0001991"	"0.002718"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLGEELFK"	"[K].dSLGEELFk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"748.42389"	"1495.84050"	"1495.84083"	"-0.22"	"-0.00016"	"14/74"	"14"	"74"	"482381.70880127"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"103.0025"	"36781"	"36781"	"36762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"57.1"	""	"53.2"	""	"61.9"	"0.1"	"75.3"	"80.0"	""	"822"	"48"	"36.000"	"29.000"	"0.000606515385176392"	""	"0"	"5.013E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYDLTPVDK"	"[K].sYDLTPVDk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"748.42413"	"1495.84099"	"1495.84083"	"0.11"	"0.00008"	"10/78"	"10"	"78"	"420698.813659668"	"HCD"	"MS2"	"10.81548"	"37.3"	"100.000"	"74.6203"	"25344"	"25344"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"44.9"	""	"49.8"	""	"62.9"	"2.2"	"70.7"	"71.4"	""	"822"	"25"	"36.000"	"29.000"	"0.119906250275448"	"21"	"0.001217"	"0.009469"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLGEELFK"	"[K].dSLGEELFk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"748.42413"	"1495.84099"	"1495.84083"	"0.11"	"0.00008"	"7/74"	"7"	"74"	"698259.243591309"	"HCD"	"MS2"	"46.89663"	"55.0"	"100.000"	"102.7051"	"36660"	"36660"	"36638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.9"	""	"70.4"	""	"61.1"	""	"98.7"	"0.9"	"100.5"	"101.3"	""	"822"	"39"	"36.000"	"29.000"	"0.0050100472515812"	""	"0"	"4.311E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYDLTPVDK"	"[K].sYDLTPVDk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"Q62991"	"Sec1 family domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Scfd1 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"748.42419"	"1495.84111"	"1495.84083"	"0.19"	"0.00014"	"7/78"	"7"	"78"	"452007.11541748"	"HCD"	"MS2"	"11.82917"	"39.6"	"100.000"	"74.4855"	"25259"	"25259"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"50.0"	""	"47.8"	""	"71.0"	"0.4"	"73.7"	"70.2"	""	"822"	"40"	"36.000"	"29.000"	"0.00384451732074644"	"26"	"0.0001686"	"0.001476"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAAADFTAK"	"[K].aATAAADFTAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"3"	"3"	"0.9268"	"0.0000"	"1"	"1"	"1"	"499.28845"	"1495.85080"	"1495.85206"	"-0.84"	"-0.00042"	"11/92"	"11"	"92"	"1263012.81677246"	"HCD"	"MS2"	"61.39514"	"50.5"	"100.000"	"63.5926"	"20872"	"20872"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"70.4"	""	"70.2"	""	"87.0"	""	"99.0"	"88.2"	""	"763"	"41"	"35.000"	"28.000"	"0.00277009422761511"	"18"	"0"	"0.0001919"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAAADFTAK"	"[K].aATAAADFTAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"3"	"3"	"0.9692"	"0.0000"	"1"	"1"	"1"	"499.28848"	"1495.85089"	"1495.85206"	"-0.78"	"-0.00039"	"9/92"	"9"	"92"	"990656.583251953"	"HCD"	"MS2"	"55.02545"	"46.1"	"100.000"	"63.5296"	"20814"	"20814"	"20789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.6"	""	"65.5"	""	"57.7"	""	"77.2"	"1.6"	"86.3"	"81.2"	""	"763"	"65"	"35.000"	"28.000"	"1.17623620302013E-05"	"19"	"0"	"5.233E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AATAAADFTAK"	"[K].aATAAADFTAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"Q5XIG8"	"Serine-threonine kinase receptor-associated protein OS=Rattus norvegicus OX=10116 GN=Strap PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"748.43048"	"1495.85369"	"1495.85206"	"1.08"	"0.00081"	"17/92"	"17"	"92"	"370727.97869873"	"HCD"	"MS2"	"14.64999"	"36.3"	"100.000"	"63.6249"	"20885"	"20885"	"20857"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.2"	""	"50.4"	""	"43.4"	""	"65.8"	"0.3"	"73.3"	"69.1"	""	"751"	"60"	"35.000"	"28.000"	"3.41672433873411E-05"	"23"	"0"	"3.083E-06"	"0.965"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"748.86670"	"1496.72612"	"1496.72863"	"-1.68"	"-0.00125"	"8/98"	"8"	"98"	"190886.47869873"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"72.8538"	"24595"	"24595"	"24570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"15.4"	""	"15.3"	""	"28.4"	""	"26.1"	"23.4"	""	"541"	"30"	"34.000"	"27.000"	"0.0257138596684024"	""	"0.008135"	"0.1043"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"748.86682"	"1496.72637"	"1496.72863"	"-1.51"	"-0.00113"	"6/96"	"6"	"96"	"246013.212097168"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"70.3684"	"23588"	"23588"	"23566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	"1.9"	"25.7"	""	"26.3"	""	"23.5"	"1.1"	"47.1"	"41.2"	""	"537"	"25"	"34.000"	"27.000"	"0.0893190900594402"	"17"	"0.0001991"	"0.003927"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"748.86700"	"1496.72673"	"1496.72863"	"-1.27"	"-0.00095"	"13/98"	"13"	"98"	"228257.396789551"	"HCD"	"MS2"	"29.63854"	"15.5"	"100.000"	"72.6082"	"24525"	"24525"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"9.4"	""	"22.0"	""	"32.3"	"1.7"	"35.1"	"28.8"	""	"540"	"26"	"34.000"	"27.000"	"0.0617111676911366"	""	"0.004213"	"0.04756"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGMSIVEAmER.[F]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"748.86755"	"1496.72783"	"1496.72863"	"-0.53"	"-0.00040"	"7/98"	"7"	"98"	"168036.022583008"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"57.8886"	"18557"	"18557"	"18530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"18.0"	""	"13.1"	""	"21.3"	""	"28.1"	"24.8"	""	"533"	"21"	"34.000"	"27.000"	"0.222176035701132"	"25"	"0.001951"	"0.01676"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGMSIVEAMER"	"[K].eGmSIVEAMER.[F]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"748.86780"	"1496.72832"	"1496.72863"	"-0.21"	"-0.00016"	"10/98"	"10"	"98"	"140334.985656738"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"87.9546"	"30735"	"30735"	"30710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.7"	""	"11.4"	""	"13.2"	""	"11.5"	""	"17.5"	"19.7"	""	"535"	"19"	"34.000"	"27.000"	"0.308548746467143"	"22"	"0.004234"	"0.04842"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.86780"	"1496.72832"	"1496.72863"	"-0.21"	"-0.00016"	"6/96"	"6"	"96"	"373495.75189209"	"HCD"	"MS2"	"56.24343"	"28.9"	"100.000"	"70.0549"	"23461"	"23461"	"23432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.8"	""	"52.0"	""	"47.4"	""	"34.3"	""	"48.7"	"45.5"	""	"535"	"22"	"34.000"	"27.000"	"0.174310595411276"	"14"	"9.9E-05"	"0.000784"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.86816"	"1496.72905"	"1496.72863"	"0.28"	"0.00021"	"7/96"	"7"	"96"	"361662.367614746"	"HCD"	"MS2"	"37.00143"	"25.1"	"100.000"	"70.3747"	"23624"	"23624"	"23604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.4"	""	"38.8"	""	"44.1"	""	"30.2"	""	"42.1"	"49.1"	""	"536"	"28"	"34.000"	"27.000"	"0.0428681551668731"	"14"	"9.9E-05"	"0.0006293"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVMIDEDMTAR"	"[R].sVMIDEDMTAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"748.86871"	"1496.73015"	"1496.72863"	"1.02"	"0.00076"	"5/96"	"5"	"96"	"197460.757141113"	"HCD"	"MS2"	"100"	"13.8"	"100.000"	"70.0565"	"23496"	"23496"	"23465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.3"	""	"24.0"	""	"23.8"	""	"16.5"	""	"25.4"	"25.4"	""	"555"	"5"	"34.000"	"27.000"	"8.43845594625167"	"16"	"0.00511"	"0.06551"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REDSFTFIPR"	"[K].rEDSFTFIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"1"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"499.60565"	"1496.80240"	"1496.80589"	"-2.33"	"-0.00116"	"7/98"	"7"	"98"	"797243.49407959"	"HCD"	"MS2"	"4.386247"	"21.4"	"100.000"	"69.6768"	"23307"	"23307"	"23283"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"28.3"	""	"27.9"	""	"35.2"	"2.3"	"38.7"	"39.8"	""	"783"	"28"	"35.000"	"28.000"	"0.0609160544773386"	"18"	"0.001103"	"0.009174"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REDSFTFIPR"	"[K].rEDSFTFIPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"Q9WVI4"	"Guanylate cyclase soluble subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gucy1a2 PE=1 SV=2"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"499.60666"	"1496.80542"	"1496.80589"	"-0.31"	"-0.00016"	"9/98"	"9"	"98"	"1007495.56604004"	"HCD"	"MS2"	"8.908738"	"22.0"	"100.000"	"69.9158"	"23438"	"23438"	"23420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.9"	""	"31.9"	""	"31.0"	""	"41.3"	"0.6"	"39.6"	"37.9"	""	"782"	"54"	"35.000"	"28.000"	"0.000168335904702259"	"22"	"0"	"4.763E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVEDKDGYR"	"[R].gVEDkDGYR.[M]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"499.60800"	"1496.80945"	"1496.81093"	"-0.99"	"-0.00049"	"7/78"	"7"	"78"	"2919172.40838623"	"HCD"	"MS2"	"52.38016"	"194.6"	"100.000"	"30.8305"	"7590"	"7590"	"7576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"532.1"	""	"284.2"	""	"193.1"	""	"300.4"	""	"275.7"	"249.5"	""	"825"	"3"	"36.000"	"29.000"	"21.3512818179609"	"13"	"0.008926"	"0.1162"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIGVDSTGK"	"[R].dFIGVDSTGk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70541"	"Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus OX=10116 GN=Eif2b3 PE=2 SV=2"	"P70541"	"Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus OX=10116 GN=Eif2b3 PE=2 SV=2"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"748.91052"	"1496.81377"	"1496.83608"	"-14.91"	"-0.01116"	"11/86"	"11"	"86"	"235796.540100098"	"HCD"	"MS2"	"45.70314"	"21.8"	"100.000"	"81.4399"	"28106"	"28106"	"28080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	""	"28.5"	""	"37.1"	""	"29.8"	""	"39.2"	"37.7"	""	"837"	"24"	"36.000"	"29.000"	"0.158378221704103"	"25"	"0.0001991"	"0.004184"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGSPAEAAALR"	"[R].vEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"748.91650"	"1496.82573"	"1496.82702"	"-0.86"	"-0.00065"	"5/108"	"5"	"108"	"213601.799743652"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"57.6795"	"18436"	"18436"	"18407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"10.2"	""	"15.4"	""	"28.6"	""	"30.0"	"26.5"	""	"841"	"12"	"36.000"	"29.000"	"2.659291835037"	"18"	"0.00307"	"0.03343"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGSPAEAAALR"	"[R].vEPGSPAEAAALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"748.91705"	"1496.82683"	"1496.82702"	"-0.13"	"-0.00010"	"7/108"	"7"	"108"	"185373.31842041"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"57.3570"	"18340"	"18340"	"18309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"16.0"	""	"20.1"	""	"23.6"	""	"30.3"	"30.3"	""	"836"	"29"	"36.000"	"29.000"	"0.0481034562578774"	"14"	"0.001615"	"0.0131"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIGVDSTGK"	"[R].dFIGVDSTGk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70541"	"Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus OX=10116 GN=Eif2b3 PE=2 SV=2"	"P70541"	"Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus OX=10116 GN=Eif2b3 PE=2 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"748.92181"	"1496.83635"	"1496.83608"	"0.18"	"0.00014"	"8/86"	"8"	"86"	"278462.220336914"	"HCD"	"MS2"	"49.14153"	"26.8"	"100.000"	"81.4725"	"28092"	"28092"	"28065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.2"	""	"43.1"	""	"44.0"	""	"36.0"	""	"47.5"	"45.4"	""	"800"	"39"	"36.000"	"29.000"	"0.00480905773846965"	"27"	"0"	"3.327E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFIGVDSTGK"	"[R].dFIGVDSTGk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P70541"	"Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus OX=10116 GN=Eif2b3 PE=2 SV=2"	"P70541"	"Translation initiation factor eIF-2B subunit gamma OS=Rattus norvegicus OX=10116 GN=Eif2b3 PE=2 SV=2"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"748.92310"	"1496.83891"	"1496.83608"	"1.89"	"0.00142"	"12/86"	"12"	"86"	"293124.99609375"	"HCD"	"MS2"	"31.74572"	"29.7"	"100.000"	"81.6959"	"28210"	"28210"	"28184"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"40.6"	""	"45.3"	""	"46.0"	"0.7"	"54.5"	"57.4"	""	"801"	"26"	"36.000"	"29.000"	"0.0919607533569"	"17"	"9.9E-05"	"0.000896"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPFIFEK"	"[K].eEPFIFEk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O89040"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus OX=10116 GN=Plcb2 PE=2 SV=1"	"O89040"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 OS=Rattus norvegicus OX=10116 GN=Plcb2 PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"748.92340"	"1496.83953"	"1496.84010"	"-0.39"	"-0.00029"	"5/68"	"5"	"68"	"143571.310058594"	"HCD"	"MS2"	"32.82133"	"11.0"	"100.000"	"104.9555"	"37559"	"37559"	"37537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.8"	""	"10.8"	""	"15.0"	""	"18.3"	""	"22.4"	"22.8"	""	"790"	"23"	"35.000"	"28.000"	"0.216071305343119"	"20"	"0.002166"	"0.01975"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHAVDLIQK"	"[K].dHAVDLIQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"499.63196"	"1496.88132"	"1496.88370"	"-1.59"	"-0.00079"	"11/74"	"11"	"74"	"4609281.17553711"	"HCD"	"MS2"	"9.74405"	"110.9"	"100.000"	"55.0679"	"17415"	"17415"	"17394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.3"	""	"156.9"	""	"114.5"	""	"174.2"	""	"197.2"	"187.8"	""	"607"	"41"	"34.000"	"27.000"	"0.00241634362851656"	"26"	"0"	"6.88E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHAVDLIQK"	"[K].dHAVDLIQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"499.63235"	"1496.88251"	"1496.88370"	"-0.79"	"-0.00040"	"6/74"	"6"	"74"	"4863961.59967041"	"HCD"	"MS2"	"18.58375"	"121.1"	"100.000"	"55.4775"	"17548"	"17548"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"238.1"	""	"171.7"	""	"137.9"	""	"186.8"	""	"225.9"	"185.2"	""	"582"	"35"	"34.000"	"27.000"	"0.00911786145775835"	"25"	"0"	"0.0002091"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHAVDLIQK"	"[K].dHAVDLIQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"499.63269"	"1496.88352"	"1496.88370"	"-0.12"	"-0.00006"	"10/74"	"10"	"74"	"2087478.4074707"	"HCD"	"MS2"	"14.51271"	"63.3"	"100.000"	"54.7759"	"17296"	"17296"	"17275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.5"	""	"88.1"	""	"81.4"	""	"110.5"	""	"114.7"	"90.5"	""	"565"	"25"	"34.000"	"27.000"	"0.0837564867540627"	"20"	"9.9E-05"	"0.00071"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHAVDLIQK"	"[K].dHAVDLIQk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.6944"	"0.0000"	"1"	"1"	"1"	"499.63290"	"1496.88416"	"1496.88370"	"0.31"	"0.00015"	"10/74"	"10"	"74"	"3126226.36810303"	"HCD"	"MS2"	"10.19407"	"83.4"	"100.000"	"55.1874"	"17430"	"17430"	"17405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.0"	""	"126.8"	""	"88.5"	""	"136.5"	"0.5"	"143.1"	"117.0"	""	"569"	"36"	"34.000"	"27.000"	"0.00734653024235543"	"25"	"0"	"0.0002398"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLMASDDFGR"	"[K].eQLMASDDFGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"749.36438"	"1497.72148"	"1497.72051"	"0.65"	"0.00049"	"7/112"	"7"	"112"	"302356.34564209"	"HCD"	"MS2"	"19.66036"	"20.7"	"100.000"	"70.5313"	"23688"	"23688"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"30.1"	""	"23.7"	""	"28.6"	""	"41.5"	"45.2"	""	"471"	"21"	"33.000"	"26.000"	"0.20044300799666"	"19"	"0.0003938"	"0.006306"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQLMASDDFGR"	"[K].eQLMASDDFGR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"749.36523"	"1497.72319"	"1497.72051"	"1.79"	"0.00134"	"6/112"	"6"	"112"	"275527.584777832"	"HCD"	"MS2"	"17.35462"	"20.6"	"100.000"	"70.4376"	"23616"	"23616"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"29.2"	""	"27.5"	""	"22.7"	""	"43.5"	"45.2"	""	"470"	"23"	"33.000"	"26.000"	"0.121078731476713"	"25"	"0.0001991"	"0.002284"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"749.41296"	"1497.81865"	"1497.82010"	"-0.96"	"-0.00072"	"8/76"	"8"	"76"	"15365893.6254272"	"HCD"	"MS2"	"5.866534"	"810.9"	"83.442"	"62.6759"	"20500"	"20500"	"20483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1311.8"	""	"1103.3"	""	"1201.4"	""	"1151.8"	""	"1474.4"	"1438.8"	""	"871"	"43"	"36.000"	"29.000"	"0.00238225451840325"	"25"	"9.9E-05"	"0.0006628"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"499.94443"	"1497.81873"	"1497.82010"	"-0.91"	"-0.00046"	"10/76"	"10"	"76"	"10144151.6290894"	"HCD"	"MS2"	"5.373652"	"262.0"	"100.000"	"62.5746"	"20458"	"20458"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.1"	""	"351.6"	""	"411.5"	""	"380.8"	"1.6"	"468.6"	"452.5"	""	"871"	"27"	"36.000"	"29.000"	"0.0855043400562098"	"22"	"0.0001686"	"0.001905"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"749.41302"	"1497.81877"	"1497.82010"	"-0.88"	"-0.00066"	"13/76"	"13"	"76"	"1272427.43292236"	"HCD"	"MS2"	"20.33965"	"99.0"	"100.000"	"62.3881"	"20382"	"20382"	"20361"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.0"	""	"146.4"	""	"147.4"	""	"148.2"	"0.3"	"177.7"	"170.0"	""	"871"	"32"	"36.000"	"29.000"	"0.0255263170645859"	"24"	"9.9E-05"	"0.0008252"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"499.94479"	"1497.81983"	"1497.82010"	"-0.18"	"-0.00009"	"10/76"	"10"	"76"	"17686095.4597168"	"HCD"	"MS2"	"4.527113"	"214.2"	"43.192"	"62.8671"	"20577"	"20577"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"336.8"	""	"292.0"	""	"339.7"	""	"297.3"	""	"367.4"	"397.3"	""	"887"	"25"	"36.000"	"29.000"	"0.129090304186254"	"22"	"0.0001991"	"0.002962"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"749.41357"	"1497.81987"	"1497.82010"	"-0.15"	"-0.00011"	"8/76"	"8"	"76"	"1399898.92041016"	"HCD"	"MS2"	"5.23765"	"103.9"	"100.000"	"62.4449"	"20372"	"20372"	"20349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.5"	""	"144.9"	""	"143.3"	""	"162.2"	""	"176.5"	"186.7"	""	"881"	"39"	"36.000"	"29.000"	"0.00541933393542854"	"24"	"0"	"0.0001397"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"499.94489"	"1497.82010"	"1497.82010"	"0.00"	"0.00000"	"9/76"	"9"	"76"	"2174090.44091797"	"HCD"	"MS2"	"4.042008"	"71.5"	"100.000"	"63.1553"	"20693"	"20693"	"20673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.8"	""	"86.9"	""	"102.6"	""	"103.1"	""	"140.0"	"136.2"	""	"902"	"27"	"36.000"	"29.000"	"0.0861343819613373"	"22"	"0.0001686"	"0.001132"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"499.94498"	"1497.82038"	"1497.82010"	"0.19"	"0.00009"	"10/76"	"10"	"76"	"10497194.9049072"	"HCD"	"MS2"	"4.575992"	"277.1"	"100.000"	"62.6245"	"20445"	"20445"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"444.6"	""	"398.6"	""	"427.2"	""	"400.7"	""	"468.8"	"488.0"	""	"902"	"29"	"36.000"	"29.000"	"0.0516626336591937"	"23"	"9.9E-05"	"0.001009"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"749.41388"	"1497.82048"	"1497.82010"	"0.26"	"0.00019"	"8/76"	"8"	"76"	"11195868.144165"	"HCD"	"MS2"	"24.02091"	"403.9"	"63.895"	"62.9754"	"20621"	"20621"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"595.9"	""	"528.2"	""	"606.3"	""	"565.1"	""	"744.1"	"794.7"	""	"902"	"30"	"36.000"	"29.000"	"0.0405673409270046"	"22"	"9.9E-05"	"0.0006955"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"499.94510"	"1497.82074"	"1497.82010"	"0.43"	"0.00022"	"10/76"	"10"	"76"	"1877318.40325928"	"HCD"	"MS2"	"5.230521"	"65.3"	"100.000"	"63.2186"	"20687"	"20687"	"20668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.4"	""	"82.0"	""	"97.3"	""	"95.2"	"0.5"	"121.1"	"124.2"	""	"886"	"31"	"36.000"	"29.000"	"0.0341510236795543"	"23"	"9.9E-05"	"0.0006007"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"499.94513"	"1497.82083"	"1497.82010"	"0.49"	"0.00025"	"10/76"	"10"	"76"	"17832212.3411865"	"HCD"	"MS2"	"4.511092"	"281.9"	"58.658"	"62.9102"	"20562"	"20562"	"20545"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"443.4"	""	"368.1"	""	"439.3"	""	"391.8"	""	"501.1"	"525.6"	""	"886"	"30"	"36.000"	"29.000"	"0.0405885677124046"	"23"	"0.0001686"	"0.001488"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"749.41412"	"1497.82097"	"1497.82010"	"0.58"	"0.00044"	"8/76"	"8"	"76"	"8200623.93658447"	"HCD"	"MS2"	"30.85175"	"418.0"	"100.000"	"63.0668"	"20626"	"20626"	"20609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"572.7"	""	"509.3"	""	"627.5"	""	"570.4"	""	"839.7"	"853.8"	""	"885"	"31"	"36.000"	"29.000"	"0.0363005558365945"	"21"	"9.9E-05"	"0.0009396"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YESLTDPSK"	"[R].yESLTDPSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.5143"	"0.0000"	"1"	"1"	"1"	"749.41425"	"1497.82121"	"1497.82010"	"0.75"	"0.00056"	"14/76"	"14"	"76"	"18678396.277832"	"HCD"	"MS2"	"4.211681"	"632.1"	"51.904"	"62.7583"	"20500"	"20500"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1028.6"	""	"837.9"	""	"999.9"	""	"862.9"	""	"1110.1"	"1148.6"	""	"885"	"35"	"36.000"	"29.000"	"0.0152726104656116"	""	"9.9E-05"	"0.0006306"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLDPVEILQER"	"[R].gLDPVEILQER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K1P7"	"Transcription activator BRG1 OS=Rattus norvegicus OX=10116 GN=Smarca4 PE=1 SV=1"	"Q8K1P7"	"Transcription activator BRG1 OS=Rattus norvegicus OX=10116 GN=Smarca4 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"749.42737"	"1497.84746"	"1497.84742"	"0.02"	"0.00002"	"6/98"	"6"	"98"	"162566.30670166"	"HCD"	"MS2"	"11.77381"	"10.4"	"100.000"	"110.2745"	"39618"	"39618"	"39591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"10.1"	""	"11.5"	""	"16.8"	""	"19.9"	"25.5"	""	"845"	"14"	"36.000"	"29.000"	"1.59891992042972"	"20"	"0.001951"	"0.01653"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSTVFELK"	"[K].eSSTVFELk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"749.43164"	"1497.85600"	"1497.85648"	"-0.32"	"-0.00024"	"8/76"	"8"	"76"	"492727.513183594"	"HCD"	"MS2"	"16.86847"	"45.1"	"100.000"	"89.3047"	"31241"	"31241"	"31225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.9"	""	"52.2"	""	"60.4"	""	"72.9"	""	"87.5"	"95.5"	""	"777"	"49"	"35.000"	"28.000"	"0.000447085951104913"	""	"0"	"2.614E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSTVFELK"	"[K].eSSTVFELk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"749.43188"	"1497.85649"	"1497.85648"	"0.01"	"0.00001"	"8/76"	"8"	"76"	"386689.821105957"	"HCD"	"MS2"	"10.46135"	"36.7"	"100.000"	"89.2459"	"31257"	"31257"	"31238"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.0"	""	"45.5"	""	"49.5"	""	"53.1"	""	"69.5"	"78.6"	""	"758"	"50"	"35.000"	"28.000"	"0.000356976157082157"	""	"0"	"0.0001186"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSTVFELK"	"[K].eSSTVFELk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"749.43195"	"1497.85661"	"1497.85648"	"0.09"	"0.00007"	"8/76"	"8"	"76"	"380584.823242188"	"HCD"	"MS2"	"15.04805"	"36.8"	"100.000"	"88.9457"	"31137"	"31137"	"31116"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.0"	""	"47.0"	""	"41.5"	""	"58.2"	""	"68.7"	"75.9"	""	"758"	"51"	"35.000"	"28.000"	"0.000331618850811199"	""	"0"	"1.628E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSTVFELK"	"[K].eSSTVFELk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"P62870"	"Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"749.43219"	"1497.85710"	"1497.85648"	"0.42"	"0.00031"	"7/76"	"7"	"76"	"292968.659301758"	"HCD"	"MS2"	"32.4681"	"27.5"	"100.000"	"88.9837"	"31113"	"31113"	"31089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.1"	""	"35.3"	""	"36.0"	""	"40.9"	""	"56.4"	"51.8"	""	"735"	"39"	"35.000"	"28.000"	"0.00516722465117743"	"25"	"0"	"0.0003353"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADPDPNVK"	"[K].lAADPDPNVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"749.43610"	"1497.86492"	"1497.86771"	"-1.87"	"-0.00140"	"9/80"	"9"	"80"	"238911.249267578"	"HCD"	"MS2"	"16.81456"	"21.3"	"100.000"	"60.5865"	"19653"	"19653"	"19628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	""	"29.0"	""	"26.7"	""	"36.3"	""	"38.9"	"46.3"	""	"679"	"19"	"35.000"	"28.000"	"0.465414359612968"	"15"	"0.002189"	"0.021"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDPPIAVAK"	"[K].dNDPPIAVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"499.96017"	"1497.86597"	"1497.86771"	"-1.16"	"-0.00058"	"10/92"	"10"	"92"	"1046244.40838623"	"HCD"	"MS2"	"0"	"42.7"	"100.000"	"60.9803"	"19813"	"19813"	"19787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.0"	""	"47.3"	""	"49.5"	""	"75.8"	"0.1"	"93.1"	"80.3"	""	"693"	"31"	"35.000"	"28.000"	"0.0267118052030825"	"19"	"0.0001686"	"0.001645"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDPPIAVAK"	"[K].dNDPPIAVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.6786"	"0.0000"	"1"	"1"	"1"	"749.43719"	"1497.86711"	"1497.86771"	"-0.40"	"-0.00030"	"5/92"	"5"	"92"	"534716.692199707"	"HCD"	"MS2"	"0"	"40.8"	"100.000"	"61.3555"	"19934"	"19934"	"19912"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.0"	""	"46.8"	""	"49.4"	""	"69.2"	"0.1"	"85.2"	"72.2"	""	"687"	"28"	"35.000"	"28.000"	"0.0509244962247635"	"23"	"0.0001991"	"0.004943"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADPDPNVK"	"[K].lAADPDPNVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"749.43726"	"1497.86724"	"1497.86771"	"-0.32"	"-0.00024"	"9/80"	"9"	"80"	"284357.894348145"	"HCD"	"MS2"	"12.18321"	"23.5"	"100.000"	"60.2505"	"19517"	"19517"	"19493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"28.8"	""	"31.4"	""	"34.7"	""	"45.6"	"45.4"	""	"686"	"16"	"35.000"	"28.000"	"0.843906088222635"	"20"	"0.001999"	"0.01738"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDPPIAVAK"	"[K].dNDPPIAVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"749.43726"	"1497.86724"	"1497.86771"	"-0.32"	"-0.00024"	"14/92"	"14"	"92"	"809639.070556641"	"HCD"	"MS2"	"0"	"56.9"	"100.000"	"61.2128"	"19907"	"19907"	"19888"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.2"	""	"59.9"	""	"63.8"	""	"107.2"	"1.2"	"106.3"	"110.8"	""	"686"	"39"	"35.000"	"28.000"	"0.0041907728343655"	"19"	"0"	"0.0001182"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDPPIAVAK"	"[K].dNDPPIAVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"749.43726"	"1497.86724"	"1497.86771"	"-0.32"	"-0.00024"	"14/92"	"14"	"92"	"774976.050231934"	"HCD"	"MS2"	"0"	"56.8"	"100.000"	"60.8974"	"19779"	"19779"	"19760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.6"	""	"65.4"	""	"63.7"	""	"109.8"	"0.3"	"120.3"	"102.7"	""	"686"	"50"	"35.000"	"28.000"	"0.000361654705462201"	""	"0"	"1.303E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDPPIAVAK"	"[K].dNDPPIAVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"499.96072"	"1497.86762"	"1497.86771"	"-0.06"	"-0.00003"	"11/92"	"11"	"92"	"1433305.35662842"	"HCD"	"MS2"	"28.65921"	"53.7"	"100.000"	"61.0494"	"19809"	"19809"	"19786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.3"	""	"58.2"	""	"67.8"	""	"103.7"	""	"106.4"	"98.1"	""	"677"	"49"	"35.000"	"28.000"	"0.000402308003987431"	"24"	"0"	"6.185E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDPPIAVAK"	"[K].dNDPPIAVAk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"749.43750"	"1497.86772"	"1497.86771"	"0.01"	"0.00000"	"14/92"	"14"	"92"	"1049655.0602417"	"HCD"	"MS2"	"0"	"73.8"	"100.000"	"61.0517"	"19810"	"19810"	"19786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.3"	""	"72.9"	""	"83.9"	""	"132.1"	""	"153.9"	"138.1"	""	"679"	"40"	"35.000"	"28.000"	"0.00316839835120578"	"26"	"0"	"4.817E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADPDPNVK"	"[K].lAADPDPNVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"749.43799"	"1497.86870"	"1497.86771"	"0.66"	"0.00049"	"9/80"	"9"	"80"	"254327.476013184"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"60.7225"	"19676"	"19676"	"19647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.2"	""	"26.2"	""	"27.5"	""	"37.2"	""	"48.9"	"45.3"	""	"651"	"12"	"35.000"	"28.000"	"2.17545945168584"	"13"	"0.002525"	"0.0241"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAADPDPNVK"	"[K].lAADPDPNVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"Q80W92"	"Protein VAC14 homolog OS=Rattus norvegicus OX=10116 GN=Vac14 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"749.43805"	"1497.86882"	"1497.86771"	"0.74"	"0.00055"	"5/80"	"5"	"80"	"351281.932373047"	"HCD"	"MS2"	"27.88451"	"25.6"	"100.000"	"60.3842"	"19538"	"19538"	"19512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.1"	""	"36.1"	""	"31.3"	""	"46.3"	""	"43.2"	"50.6"	""	"651"	"13"	"35.000"	"28.000"	"1.805306695678"	"16"	"0.002525"	"0.0252"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAAAAAPLEK"	"[K].tPAAAAAPLEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"749.45416"	"1497.90105"	"1497.90410"	"-2.04"	"-0.00153"	"12/98"	"12"	"98"	"247550.308166504"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"59.3342"	"19111"	"19111"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.7"	""	"21.4"	""	"25.8"	""	"37.6"	"1.2"	"43.8"	"44.8"	""	"422"	"42"	"33.000"	"26.000"	"0.0012597444546919"	"21"	"9.9E-05"	"0.0006958"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAAAAAPLEK"	"[K].tPAAAAAPLEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"749.45496"	"1497.90264"	"1497.90410"	"-0.98"	"-0.00073"	"7/98"	"7"	"98"	"242897.26385498"	"HCD"	"MS2"	"27.48202"	"20.1"	"100.000"	"59.1821"	"19084"	"19084"	"19057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"21.0"	""	"21.7"	""	"43.9"	"2.0"	"40.2"	"37.5"	""	"428"	"35"	"33.000"	"26.000"	"0.00605917887101068"	"23"	"0.0001991"	"0.003002"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQESFNNDR"	"[R].fLQESFNNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"749.87769"	"1498.74809"	"1498.74877"	"-0.45"	"-0.00034"	"13/96"	"13"	"96"	"278341.63067627"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"77.7389"	"26574"	"26574"	"26549"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.3"	""	"19.5"	""	"24.7"	""	"42.2"	""	"39.7"	"40.8"	""	"610"	"21"	"34.000"	"27.000"	"0.219431938291128"	"22"	"0.0001686"	"0.001724"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQESFNNDR"	"[R].fLQESFNNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.2667"	"0.0000"	"1"	"1"	"1"	"749.87775"	"1498.74822"	"1498.74877"	"-0.37"	"-0.00028"	"5/96"	"5"	"96"	"197499.214416504"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"78.0613"	"26705"	"26705"	"26682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.6"	""	"21.5"	""	"26.5"	""	"28.7"	""	"29.7"	"28.5"	""	"610"	"15"	"34.000"	"27.000"	"0.95126132314865"	"25"	"0.001261"	"0.00961"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLQESFNNDR"	"[R].fLQESFNNDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"B5DF89"	"Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"749.87878"	"1498.75029"	"1498.74877"	"1.01"	"0.00076"	"5/96"	"5"	"96"	"259612.947021484"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"77.9645"	"26693"	"26693"	"26670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"30.1"	"2.0"	"25.2"	""	"26.1"	""	"37.1"	"39.6"	""	"625"	"24"	"34.000"	"27.000"	"0.122984398579931"	"27"	"0.0001991"	"0.005781"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPFIVTSDDGR"	"[K].yPFIVTSDDGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"P21588"	"5'-nucleotidase OS=Rattus norvegicus OX=10116 GN=Nt5e PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"749.89056"	"1498.77385"	"1498.77392"	"-0.05"	"-0.00004"	"7/86"	"7"	"86"	"236422.388183594"	"HCD"	"MS2"	"8.335058"	"12.3"	"100.000"	"95.7358"	"33871"	"33871"	"33851"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"10.9"	""	"11.8"	""	"22.3"	""	"32.0"	"28.3"	""	"709"	"25"	"35.000"	"28.000"	"0.114978394350344"	"22"	"0.001615"	"0.01421"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTTTSSVEGK"	"[R].mTTTSSVEGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"749.91107"	"1498.81487"	"1498.81872"	"-2.57"	"-0.00192"	"7/84"	"7"	"84"	"336351.815307617"	"HCD"	"MS2"	"0"	"35.6"	"100.000"	"42.8168"	"12403"	"12403"	"12378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.7"	""	"49.7"	""	"53.1"	""	"35.4"	""	"72.9"	"72.7"	""	"892"	"29"	"36.000"	"29.000"	"0.0546178824872211"	""	"0.001872"	"0.01575"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDAPVSSVALR"	"[R].vGVDAPVSSVALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03336"	"Regucalcin OS=Rattus norvegicus OX=10116 GN=Rgn PE=1 SV=3"	"Q03336"	"Regucalcin OS=Rattus norvegicus OX=10116 GN=Rgn PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"749.94250"	"1498.87773"	"1498.87906"	"-0.88"	"-0.00066"	"6/106"	"6"	"106"	"309147.834350586"	"HCD"	"MS2"	"27.76908"	"19.7"	"100.000"	"84.5952"	"29352"	"29352"	"29334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"30.7"	""	"26.9"	""	"31.7"	"0.7"	"33.2"	"39.6"	""	"627"	"36"	"34.000"	"27.000"	"0.00839919269830766"	"15"	"0"	"0.0003292"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDAPVSSVALR"	"[R].vGVDAPVSSVALR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q03336"	"Regucalcin OS=Rattus norvegicus OX=10116 GN=Rgn PE=1 SV=3"	"Q03336"	"Regucalcin OS=Rattus norvegicus OX=10116 GN=Rgn PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"749.94275"	"1498.87822"	"1498.87906"	"-0.56"	"-0.00042"	"8/106"	"8"	"106"	"379099.666320801"	"HCD"	"MS2"	"34.11529"	"21.6"	"100.000"	"84.6407"	"29399"	"29399"	"29377"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"24.5"	""	"34.8"	""	"30.8"	""	"35.5"	"43.5"	""	"631"	"22"	"34.000"	"28.000"	"0.219280172199266"	"20"	"0"	"0.0001063"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.36591"	"1499.72453"	"1499.72493"	"-0.26"	"-0.00020"	"7/82"	"7"	"82"	"223276.64440918"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"76.1126"	"25919"	"25919"	"25893"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"18.6"	""	"22.8"	""	"27.6"	""	"27.9"	"33.3"	""	"480"	"24"	"33.000"	"26.000"	"0.0918779383960373"	"14"	"0.001615"	"0.01454"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"750.36615"	"1499.72502"	"1499.72493"	"0.06"	"0.00005"	"6/82"	"6"	"82"	"268771.208007813"	"HCD"	"MS2"	"8.406335"	"17.8"	"100.000"	"76.5079"	"26111"	"26111"	"26090"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.4"	""	"16.2"	""	"20.1"	""	"32.9"	""	"33.1"	"39.0"	""	"488"	"9"	"33.000"	"26.000"	"2.7440361364793"	"15"	"0.00981"	"0.1325"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDLYEEEMR"	"[R].lGDLYEEEmR.[E]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.36621"	"1499.72515"	"1499.72493"	"0.15"	"0.00011"	"7/82"	"7"	"82"	"240520.439331055"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"76.1941"	"25984"	"25984"	"25957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"24.0"	""	"13.9"	""	"25.6"	""	"33.6"	"38.0"	""	"488"	"26"	"33.000"	"26.000"	"0.0675133761480408"	"14"	"0.0009352"	"0.008136"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGQDYENLR"	"[K].yLGQDYENLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.38757"	"1499.76787"	"1499.76917"	"-0.87"	"-0.00065"	"8/88"	"8"	"88"	"816008.784240723"	"HCD"	"MS2"	"18.23654"	"43.5"	"100.000"	"75.1436"	"25556"	"25556"	"25534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.8"	""	"56.5"	""	"62.6"	""	"67.5"	"3.0"	"75.6"	"71.8"	""	"683"	"30"	"35.000"	"28.000"	"0.0314333528753708"	"14"	"0"	"0.0002036"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGQDYENLR"	"[K].yLGQDYENLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"750.38873"	"1499.77019"	"1499.76917"	"0.68"	"0.00051"	"8/88"	"8"	"88"	"650560.505371094"	"HCD"	"MS2"	"20.35979"	"34.8"	"100.000"	"75.1795"	"25539"	"25539"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.3"	""	"46.9"	""	"47.6"	""	"49.7"	"3.0"	"60.3"	"56.9"	""	"691"	"20"	"35.000"	"28.000"	"0.362616909099378"	"23"	"0"	"0.0001952"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMSSFPETK"	"[R].dMSSFPETk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.39459"	"1499.78191"	"1499.78160"	"0.20"	"0.00015"	"9/78"	"9"	"78"	"205763.522827148"	"HCD"	"MS2"	"18.24805"	"21.1"	"100.000"	"68.6833"	"22937"	"22937"	"22906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"25.5"	""	"28.6"	""	"29.6"	""	"32.6"	"45.5"	""	"775"	"22"	"35.000"	"28.000"	"0.24058675076415"	"14"	"0.001488"	"0.01244"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMSSFPETK"	"[R].dMSSFPETk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"750.39478"	"1499.78227"	"1499.78160"	"0.45"	"0.00034"	"9/78"	"9"	"78"	"194809.486877441"	"HCD"	"MS2"	"14.57074"	"19.8"	"100.000"	"68.5254"	"22840"	"22840"	"22812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.1"	""	"27.7"	""	"27.0"	""	"23.1"	"0.6"	"35.1"	"39.3"	""	"763"	"29"	"35.000"	"28.000"	"0.0520588466608675"	"16"	"0.0008247"	"0.007633"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIYEDMGK"	"[K].lGIYEDmGk.[M]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.41089"	"1499.81450"	"1499.81799"	"-2.32"	"-0.00174"	"13/66"	"13"	"66"	"307022.139953613"	"HCD"	"MS2"	"56.05091"	"17.4"	"100.000"	"74.3644"	"25240"	"25240"	"25217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"22.7"	""	"19.8"	""	"42.2"	""	"34.2"	"26.1"	""	"919"	"13"	"36.000"	"29.000"	"2.32962230452227"	"13"	"0.002189"	"0.02084"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQVPDQPGGLR"	"[R].fGQVPDQPGGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"750.41101"	"1499.81474"	"1499.81679"	"-1.37"	"-0.00102"	"6/106"	"6"	"106"	"332188.8515625"	"HCD"	"MS2"	"32.12508"	"21.4"	"100.000"	"73.4751"	"24878"	"24878"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"33.7"	""	"29.5"	""	"34.5"	""	"39.5"	"41.5"	""	"918"	"18"	"36.000"	"29.000"	"0.674237161438535"	"18"	"0.001488"	"0.01284"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQVPDQPGGLR"	"[R].fGQVPDQPGGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"500.61017"	"1499.81595"	"1499.81679"	"-0.56"	"-0.00028"	"4/106"	"4"	"106"	"508733.130493164"	"HCD"	"MS2"	"45.16346"	"14.8"	"100.000"	"73.7493"	"24990"	"24990"	"24960"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.5"	""	"16.2"	""	"22.3"	""	"26.3"	""	"29.5"	"28.0"	""	"904"	"17"	"36.000"	"29.000"	"0.929262549384832"	"14"	"9.9E-05"	"0.0009425"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGIYEDMGK"	"[K].lGIYEDmGk.[M]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"Q66H12"	"Alpha-N-acetylgalactosaminidase OS=Rattus norvegicus OX=10116 GN=Naga PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.41205"	"1499.81682"	"1499.81799"	"-0.78"	"-0.00058"	"11/66"	"11"	"66"	"313044.033752441"	"HCD"	"MS2"	"48.18025"	"18.7"	"100.000"	"74.2828"	"25177"	"25177"	"25158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.6"	""	"24.7"	""	"19.0"	""	"45.0"	""	"34.8"	"28.9"	""	"909"	"7"	"36.000"	"29.000"	"8.3663087466764"	"13"	"0.007953"	"0.1008"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQVPDQPGGLR"	"[R].fGQVPDQPGGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"500.61053"	"1499.81705"	"1499.81679"	"0.17"	"0.00009"	"10/106"	"10"	"106"	"507697.961242676"	"HCD"	"MS2"	"33.76321"	"16.2"	"100.000"	"73.6353"	"24914"	"24914"	"24889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"14.4"	""	"22.8"	""	"22.4"	""	"36.4"	"37.3"	""	"923"	"18"	"36.000"	"29.000"	"0.801995082467837"	"14"	"9.9E-05"	"0.0009781"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQVPDQPGGLR"	"[R].fGQVPDQPGGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"750.41266"	"1499.81804"	"1499.81679"	"0.83"	"0.00062"	"6/106"	"6"	"106"	"571040.821594238"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"73.7678"	"24997"	"24997"	"24976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.7"	""	"42.3"	""	"43.9"	""	"46.9"	""	"63.0"	"85.6"	""	"929"	"30"	"36.000"	"29.000"	"0.0518782978594071"	"21"	"0.0001991"	"0.004128"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQVPDQPGGLR"	"[R].fGQVPDQPGGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"750.41284"	"1499.81841"	"1499.81679"	"1.08"	"0.00081"	"10/106"	"10"	"106"	"491401.472045898"	"HCD"	"MS2"	"5.165733"	"31.5"	"100.000"	"73.6883"	"24935"	"24935"	"24918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"38.1"	""	"39.8"	""	"55.0"	""	"61.0"	"68.3"	""	"932"	"22"	"36.000"	"29.000"	"0.272512179211328"	"19"	"0.001615"	"0.0137"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGQVPDQPGGLR"	"[R].fGQVPDQPGGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"Q9WTV0"	"Prolactin regulatory element-binding protein OS=Rattus norvegicus OX=10116 GN=Preb PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"750.41382"	"1499.82036"	"1499.81679"	"2.38"	"0.00178"	"7/106"	"7"	"106"	"403810.090515137"	"HCD"	"MS2"	"14.25396"	"23.2"	"100.000"	"73.3772"	"24809"	"24809"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"31.2"	""	"25.6"	""	"40.3"	""	"46.8"	"45.2"	""	"918"	"30"	"36.000"	"29.000"	"0.0487318260754214"	"17"	"0.0001991"	"0.003742"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPEIQNVK"	"[K].vDPEIQNVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"750.44568"	"1499.88408"	"1499.88336"	"0.48"	"0.00036"	"7/74"	"7"	"74"	"378710.74987793"	"HCD"	"MS2"	"23.39963"	"31.7"	"100.000"	"67.3562"	"22397"	"22397"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.5"	""	"37.9"	""	"52.9"	""	"42.7"	""	"41.0"	"47.3"	""	"625"	"39"	"34.000"	"27.000"	"0.00433361196522466"	"21"	"0.0001991"	"0.003136"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDPEIQNVK"	"[K].vDPEIQNVk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"Q6IG02"	"Keratin, type II cytoskeletal 2 epidermal OS=Rattus norvegicus OX=10116 GN=Krt2 PE=3 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"750.44586"	"1499.88445"	"1499.88336"	"0.72"	"0.00054"	"7/74"	"7"	"74"	"386755.734130859"	"HCD"	"MS2"	"15.43996"	"31.2"	"100.000"	"67.3139"	"22348"	"22348"	"22327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.4"	""	"42.1"	""	"47.5"	""	"38.3"	""	"38.6"	"50.6"	""	"611"	"38"	"34.000"	"27.000"	"0.00444642749117791"	"24"	"0.0001991"	"0.003769"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVIEEYFK"	"[K].dVIEEYFk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"750.91925"	"1500.83122"	"1500.83502"	"-2.53"	"-0.00190"	"7/64"	"7"	"64"	"481762.986877441"	"HCD"	"MS2"	"44.24591"	"37.9"	"100.000"	"109.9762"	"39511"	"39511"	"39485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"43.7"	""	"41.8"	""	"83.8"	""	"78.8"	"66.1"	""	"838"	"33"	"36.000"	"29.000"	"0.0200546008683185"	""	"0.0001686"	"0.001084"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVIEEYFK"	"[K].dVIEEYFk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"750.92029"	"1500.83330"	"1500.83502"	"-1.14"	"-0.00086"	"12/64"	"12"	"64"	"153839.179870605"	"HCD"	"MS2"	"11.80248"	"14.2"	"100.000"	"110.2838"	"39635"	"39635"	"39613"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"15.6"	""	"16.5"	""	"26.4"	""	"31.7"	"27.6"	""	"837"	"31"	"36.000"	"29.000"	"0.0322623101803464"	"20"	"0.0001991"	"0.002022"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVIEEYFK"	"[K].dVIEEYFk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.92078"	"1500.83428"	"1500.83502"	"-0.49"	"-0.00037"	"12/64"	"12"	"64"	"268861.341796875"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"109.7541"	"39409"	"39409"	"39398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"26.0"	""	"29.9"	""	"50.9"	""	"47.6"	"44.6"	""	"819"	"19"	"36.000"	"29.000"	"0.481120548747737"	"14"	"0.0005161"	"0.006966"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVIEEYFK"	"[K].dVIEEYFk.[C]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"P63324"	"40S ribosomal protein S12 OS=Rattus norvegicus OX=10116 GN=Rps12 PE=1 SV=2"	"0"	"2"	"2"	"0.7027"	"0.0000"	"1"	"1"	"1"	"750.92078"	"1500.83428"	"1500.83502"	"-0.49"	"-0.00037"	"7/64"	"7"	"64"	"367581.012207031"	"HCD"	"MS2"	"2.676699"	"35.9"	"100.000"	"110.0321"	"39520"	"39520"	"39509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.8"	""	"45.2"	""	"40.8"	""	"61.2"	"0.0"	"71.2"	"70.7"	""	"819"	"37"	"36.000"	"29.000"	"0.00733253097227453"	"26"	"9.9E-05"	"0.0004438"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTAPVLEGLK"	"[K].dTAPVLEGLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"750.95416"	"1500.90105"	"1500.90377"	"-1.81"	"-0.00136"	"10/84"	"10"	"84"	"141579.140930176"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"93.9467"	"33112"	"33112"	"33083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"11.1"	""	"9.3"	""	"15.4"	""	"24.4"	"30.6"	""	"599"	"31"	"34.000"	"27.000"	"0.0226150122185798"	"15"	"0.002035"	"0.01821"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTAPVLEGLK"	"[K].dTAPVLEGLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"Q5XIN6"	"Mitochondrial proton/calcium exchanger protein OS=Rattus norvegicus OX=10116 GN=Letm1 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"750.95441"	"1500.90154"	"1500.90377"	"-1.48"	"-0.00111"	"9/84"	"9"	"84"	"127913.90222168"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"93.8078"	"33091"	"33091"	"33062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"10.7"	""	"10.2"	""	"16.7"	"1.2"	"22.6"	"35.4"	""	"615"	"28"	"34.000"	"27.000"	"0.0501008530036715"	"15"	"0.001348"	"0.01092"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLSPELLK"	"[K].qDLSPELLk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U1Z0"	"Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2"	"Q5U1Z0"	"Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"750.95532"	"1500.90337"	"1500.90377"	"-0.26"	"-0.00020"	"5/88"	"5"	"88"	"114345.928222656"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"94.4474"	"33316"	"33316"	"33287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"9.2"	""	"10.7"	""	"14.8"	""	"15.3"	"20.9"	""	"610"	"9"	"34.000"	"27.000"	"3.70936730197142"	"19"	"0.004672"	"0.05476"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGVVSDYEK"	"[R].mGVVSDYEk.[I]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"Q5M7A4"	"Ubiquitin-like modifier-activating enzyme 5 OS=Rattus norvegicus OX=10116 GN=Uba5 PE=1 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"751.40167"	"1501.79607"	"1501.79725"	"-0.79"	"-0.00059"	"7/70"	"7"	"70"	"297292.452758789"	"HCD"	"MS2"	"42.21052"	"22.9"	"100.000"	"50.6403"	"15615"	"15615"	"15594"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"27.7"	""	"33.5"	""	"41.4"	""	"38.5"	"44.4"	""	"741"	"24"	"35.000"	"28.000"	"0.147159469078428"	"25"	"0.008327"	"0.1066"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIDHYVGIAR"	"[K].tQIDHYVGIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"501.28137"	"1501.82956"	"1501.83244"	"-1.92"	"-0.00096"	"8/104"	"8"	"104"	"6058072.27819824"	"HCD"	"MS2"	"4.375525"	"91.6"	"100.000"	"55.9555"	"17773"	"17773"	"17763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.5"	""	"110.0"	""	"138.2"	""	"137.6"	"6.9"	"197.4"	"193.2"	""	"881"	"51"	"36.000"	"29.000"	"0.00038014205029135"	"19"	"0"	"2.332E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIDHYVGIAR"	"[K].tQIDHYVGIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"501.28146"	"1501.82984"	"1501.83244"	"-1.73"	"-0.00087"	"11/104"	"11"	"104"	"2575382.50006104"	"HCD"	"MS2"	"60.59274"	"61.5"	"100.000"	"56.6878"	"18032"	"18032"	"18020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.6"	""	"76.5"	""	"82.8"	""	"99.2"	""	"127.6"	"141.5"	""	"884"	"21"	"36.000"	"29.000"	"0.393932914655116"	"25"	"0.0005161"	"0.006574"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIDHYVGIAR"	"[K].tQIDHYVGIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"501.28171"	"1501.83057"	"1501.83244"	"-1.25"	"-0.00062"	"7/104"	"7"	"104"	"6775724.15026855"	"HCD"	"MS2"	"0"	"89.0"	"100.000"	"56.3739"	"17907"	"17907"	"17891"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.5"	""	"114.0"	""	"136.5"	""	"148.0"	"0.5"	"184.0"	"172.8"	""	"891"	"42"	"36.000"	"29.000"	"0.00288302035315994"	"22"	"0"	"0.0001285"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIDHYVGIAR"	"[K].tQIDHYVGIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"501.28186"	"1501.83103"	"1501.83244"	"-0.94"	"-0.00047"	"7/104"	"7"	"104"	"4959247.07110596"	"HCD"	"MS2"	"0"	"78.6"	"100.000"	"56.2349"	"17885"	"17885"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.9"	""	"105.8"	""	"125.1"	""	"125.7"	"1.7"	"149.8"	"156.5"	""	"895"	"37"	"36.000"	"29.000"	"0.00876582991393931"	"17"	"0"	"9.011E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIDHYVGIAR"	"[K].tQIDHYVGIAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"Q6RJR6"	"Reticulon-3 OS=Rattus norvegicus OX=10116 GN=Rtn3 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"751.41980"	"1501.83232"	"1501.83244"	"-0.08"	"-0.00006"	"6/104"	"6"	"104"	"166435.338562012"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"56.2753"	"17868"	"17868"	"17850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"20.7"	""	"17.5"	""	"23.2"	""	"22.9"	"30.3"	""	"898"	"28"	"36.000"	"29.000"	"0.0643052366773821"	"28"	"0.001615"	"0.01372"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGILESPTGTGK"	"[K].VNGILESPTGTGk.[T]"	"K13(TMT6plex)"	"1"	"1"	"Q5RJZ1"	"Regulator of telomere elongation helicase 1 OS=Rattus norvegicus OX=10116 GN=Rtel1 PE=2 SV=2"	"Q5RJZ1"	"Regulator of telomere elongation helicase 1 OS=Rattus norvegicus OX=10116 GN=Rtel1 PE=2 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"751.42682"	"1501.84636"	"1501.84234"	"2.68"	"0.00201"	"4/128"	"4"	"128"	"484585.582824707"	"HCD"	"MS2"	"47.31773"	"18.2"	"100.000"	"113.4520"	"40916"	"40916"	"40895"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"16.2"	""	"31.3"	""	"32.9"	""	"30.5"	"37.2"	""	"926"	"19"	"36.000"	"29.000"	"0.608949097305006"	"16"	"0.006845"	"0.08523"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVIVPIFQER"	"[K].dGVIVPIFQER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P17164"	"Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1"	"P17164"	"Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"751.43182"	"1501.85637"	"1501.85759"	"-0.81"	"-0.00061"	"5/102"	"5"	"102"	"121157.807922363"	"HCD"	"MS2"	"19.72435"	"7.6"	"100.000"	"109.3723"	"39262"	"39262"	"39252"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"7.8"	""	"6.5"	""	"14.4"	""	"14.9"	"19.0"	""	"988"	"13"	"36.000"	"29.000"	"2.67748439858402"	"14"	"0.0001991"	"0.005804"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVIVPIFQER"	"[K].dGVIVPIFQER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P17164"	"Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1"	"P17164"	"Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"3"	"751.43256"	"1501.85784"	"1501.85759"	"0.16"	"0.00012"	"5/102"	"5"	"102"	"128086.639892578"	"HCD"	"MS2"	"23.2875"	"8.3"	"100.000"	"109.5906"	"39358"	"39358"	"39347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	""	"10.9"	""	"10.3"	""	"12.0"	""	"13.9"	"18.5"	""	"969"	"12"	"36.000"	"29.000"	"3.26057189969752"	"18"	"0.0005161"	"0.006792"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTPPEGSSK"	"[R].qLTPPEGSSk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.4762"	"0.0000"	"1"	"1"	"1"	"751.43378"	"1501.86028"	"1501.86263"	"-1.57"	"-0.00118"	"7/102"	"7"	"102"	"376807.087463379"	"HCD"	"MS2"	"100"	"31.9"	"100.000"	"44.6229"	"13173"	"13173"	"13148"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.3"	""	"37.3"	""	"36.8"	""	"50.0"	"0.2"	"72.3"	"65.8"	""	"991"	"21"	"36.000"	"29.000"	"0.419801183706665"	"25"	"0.0009964"	"0.008443"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLTPPEGSSK"	"[R].qLTPPEGSSk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"B5DFC8"	"Eukaryotic translation initiation factor 3 subunit C OS=Rattus norvegicus OX=10116 GN=Eif3c PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"751.43439"	"1501.86150"	"1501.86263"	"-0.75"	"-0.00057"	"8/102"	"8"	"102"	"472846.783325195"	"HCD"	"MS2"	"0"	"35.2"	"100.000"	"44.8953"	"13250"	"13250"	"13226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.7"	""	"36.2"	""	"35.1"	""	"55.8"	"0.5"	"88.8"	"76.3"	""	"966"	"21"	"36.000"	"29.000"	"0.419707887345284"	"20"	"0.0007633"	"0.007323"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPQPESGIK"	"[R].tSPQPESGIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZUQ0"	"RILP-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rilpl1 PE=1 SV=1"	"D3ZUQ0"	"RILP-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rilpl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"751.43445"	"1501.86162"	"1501.86263"	"-0.67"	"-0.00050"	"6/96"	"6"	"96"	"234995.63458252"	"HCD"	"MS2"	"0"	"18.7"	"100.000"	"39.8902"	"11251"	"11251"	"11227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"16.3"	""	"21.7"	""	"35.1"	"1.7"	"37.2"	"43.2"	""	"966"	"25"	"36.000"	"29.000"	"0.164039006661167"	"20"	"0.004713"	"0.05559"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPQPESGIK"	"[R].tSPQPESGIk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZUQ0"	"RILP-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rilpl1 PE=1 SV=1"	"D3ZUQ0"	"RILP-like protein 1 OS=Rattus norvegicus OX=10116 GN=Rilpl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"751.43579"	"1501.86431"	"1501.86263"	"1.12"	"0.00084"	"6/96"	"6"	"96"	"263556.270324707"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"39.9515"	"11242"	"11242"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"21.4"	""	"19.3"	""	"39.3"	"1.0"	"36.7"	"33.5"	""	"984"	"39"	"36.000"	"29.000"	"0.00596987314428769"	"20"	"0.000264"	"0.006014"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGEPVQGLTK"	"[R].dGEPVQGLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8448"	"0.0000"	"1"	"1"	"1"	"751.43683"	"1501.86638"	"1501.86263"	"2.50"	"0.00188"	"8/96"	"8"	"96"	"514802.242370605"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"55.5370"	"17573"	"17573"	"17544"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.5"	""	"52.1"	""	"51.8"	""	"72.5"	"0.3"	"75.6"	"83.8"	""	"957"	"58"	"36.000"	"29.000"	"6.82153233538648E-05"	"25"	"0"	"1.44E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGEPVQGLTK"	"[R].dGEPVQGLTk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"751.43695"	"1501.86662"	"1501.86263"	"2.66"	"0.00200"	"8/96"	"8"	"96"	"561378.635864258"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"55.1690"	"17457"	"17457"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"52.0"	""	"54.0"	""	"76.6"	"1.3"	"81.9"	"100.0"	""	"951"	"52"	"36.000"	"29.000"	"0.00029184383345586"	"24"	"0"	"1.12E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDLEEVTK"	"[K].lPDLEEVTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"751.44751"	"1501.88774"	"1501.88778"	"-0.03"	"-0.00002"	"7/74"	"7"	"74"	"178340.745178223"	"HCD"	"MS2"	"12.71704"	"11.3"	"100.000"	"104.5176"	"37386"	"37386"	"37371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"16.5"	""	"12.8"	""	"19.8"	""	"20.5"	"24.7"	""	"786"	"34"	"35.000"	"28.000"	"0.0150104098440138"	"20"	"0.001615"	"0.01412"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDLEEVTK"	"[K].lPDLEEVTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"751.44769"	"1501.88811"	"1501.88778"	"0.22"	"0.00016"	"5/74"	"5"	"74"	"117594.848266602"	"HCD"	"MS2"	"9.856429"	"8.9"	"100.000"	"104.8074"	"37500"	"37500"	"37481"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"11.6"	""	"9.3"	""	"15.2"	""	"17.9"	"19.4"	""	"786"	"30"	"35.000"	"28.000"	"0.0384939564265618"	"27"	"0.004998"	"0.06351"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDLEEVTK"	"[K].lPDLEEVTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"751.44794"	"1501.88860"	"1501.88778"	"0.54"	"0.00041"	"6/74"	"6"	"74"	"150676.044006348"	"HCD"	"MS2"	"12.03544"	"11.0"	"100.000"	"105.0312"	"37608"	"37608"	"37591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"13.0"	""	"14.5"	""	"17.6"	""	"18.9"	"21.8"	""	"767"	"23"	"35.000"	"28.000"	"0.210264216047147"	"19"	"0.005152"	"0.06578"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPDLEEVTK"	"[K].lPDLEEVTk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"Q9QZK8"	"Deoxyribonuclease-2-alpha OS=Rattus norvegicus OX=10116 GN=Dnase2 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"751.44794"	"1501.88860"	"1501.88778"	"0.54"	"0.00041"	"7/74"	"7"	"74"	"138208.157531738"	"HCD"	"MS2"	"29.83618"	"9.0"	"100.000"	"104.7436"	"37496"	"37496"	"37477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	""	"13.5"	""	"10.2"	""	"15.4"	""	"14.6"	"18.3"	""	"767"	"31"	"35.000"	"28.000"	"0.0328674013645847"	"20"	"0.002189"	"0.02065"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"751.85901"	"1502.71074"	"1502.71132"	"-0.39"	"-0.00029"	"10/88"	"10"	"88"	"273161.562438965"	"HCD"	"MS2"	"12.91479"	"18.6"	"100.000"	"101.4661"	"36159"	"36159"	"36135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"22.4"	""	"29.0"	""	"27.4"	""	"35.7"	"32.7"	""	"359"	"26"	"32.000"	"25.000"	"0.0402776805319007"	"22"	"9.9E-05"	"0.0007826"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"751.85907"	"1502.71086"	"1502.71132"	"-0.31"	"-0.00023"	"12/88"	"12"	"88"	"263932.966491699"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"101.8719"	"36349"	"36349"	"36332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.5"	""	"21.1"	""	"27.9"	""	"27.3"	""	"32.8"	"37.1"	""	"358"	"33"	"32.000"	"25.000"	"0.00895061817608792"	"19"	"0"	"0.0003115"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"751.85925"	"1502.71123"	"1502.71132"	"-0.06"	"-0.00005"	"5/88"	"5"	"88"	"168009.618713379"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"101.7749"	"36284"	"36284"	"36264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"12.8"	""	"15.3"	""	"21.4"	""	"25.2"	"20.2"	""	"357"	"17"	"32.000"	"25.000"	"0.329335252323536"	"16"	"0.0009352"	"0.008245"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDSAFFWEER"	"[R].sDSAFFWEER.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2;Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q62868; Q63644"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2; Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"751.85968"	"1502.71208"	"1502.71132"	"0.51"	"0.00038"	"7/88"	"7"	"88"	"202349.252563477"	"HCD"	"MS2"	"17.48529"	"14.6"	"100.000"	"101.5861"	"36233"	"36233"	"36214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"15.2"	""	"23.1"	""	"24.2"	""	"26.1"	"25.1"	""	"368"	"38"	"32.000"	"25.000"	"0.0029094963922575"	"25"	"9.9E-05"	"0.0005014"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGYFDEFGIIR"	"[R].gGYFDEFGIIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.9796"	"0.0000"	"1"	"1"	"1"	"751.89557"	"1502.78386"	"1502.78410"	"-0.16"	"-0.00012"	"9/82"	"9"	"82"	"398233.847412109"	"HCD"	"MS2"	"0"	"27.8"	"100.000"	"111.7241"	"40208"	"40208"	"40183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.6"	""	"40.7"	""	"46.0"	""	"42.5"	""	"51.8"	"47.7"	""	"791"	"49"	"35.000"	"28.000"	"0.000483221765595206"	"17"	"0"	"2.678E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGYFDEFGIIR"	"[R].gGYFDEFGIIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"751.89581"	"1502.78435"	"1502.78410"	"0.17"	"0.00013"	"7/82"	"7"	"82"	"267931.964599609"	"HCD"	"MS2"	"3.510111"	"20.8"	"100.000"	"111.8071"	"40255"	"40255"	"40236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"21.2"	""	"41.1"	""	"31.9"	""	"35.1"	"36.0"	""	"792"	"42"	"35.000"	"28.000"	"0.00273334962320736"	"15"	"0"	"2.035E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"501.61273"	"1502.82364"	"1502.82552"	"-1.25"	"-0.00062"	"10/72"	"10"	"72"	"2107386.59350586"	"HCD"	"MS2"	"17.69147"	"66.3"	"100.000"	"95.0627"	"33565"	"33565"	"33546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.2"	""	"64.6"	""	"74.0"	""	"123.0"	""	"161.0"	"148.9"	""	"954"	"31"	"36.000"	"29.000"	"0.0349557302307257"	"23"	"0.001453"	"0.01179"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.7179"	"0.0000"	"1"	"1"	"1"	"501.61279"	"1502.82383"	"1502.82552"	"-1.12"	"-0.00056"	"10/72"	"10"	"72"	"1401106.14123535"	"HCD"	"MS2"	"18.38486"	"45.1"	"100.000"	"95.0162"	"33579"	"33579"	"33562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"44.9"	""	"47.9"	""	"82.9"	"1.5"	"106.6"	"101.8"	""	"955"	"39"	"36.000"	"29.000"	"0.00591525370068251"	"26"	"9.9E-05"	"0.0008507"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7719"	"0.0000"	"1"	"1"	"1"	"751.91583"	"1502.82439"	"1502.82552"	"-0.75"	"-0.00056"	"8/72"	"8"	"72"	"370989.32043457"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"95.6229"	"33825"	"33825"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"32.1"	""	"37.7"	""	"49.2"	"0.3"	"77.1"	"77.1"	""	"953"	"57"	"36.000"	"29.000"	"0.000101172598614311"	"29"	"0"	"0.0001197"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"751.91589"	"1502.82451"	"1502.82552"	"-0.67"	"-0.00050"	"14/72"	"14"	"72"	"306535.511535645"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"95.6370"	"33798"	"33798"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"27.4"	""	"34.3"	""	"47.8"	""	"61.0"	"68.2"	""	"955"	"51"	"36.000"	"29.000"	"0.000377549044869916"	"26"	"0"	"2.892E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"751.91589"	"1502.82451"	"1502.82552"	"-0.67"	"-0.00050"	"16/72"	"16"	"72"	"4619265.31665039"	"HCD"	"MS2"	"0"	"347.3"	"100.000"	"95.3163"	"33668"	"33668"	"33649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"339.6"	""	"314.3"	""	"387.4"	""	"602.5"	""	"804.3"	"864.7"	""	"955"	"59"	"36.000"	"29.000"	"5.90164899469754E-05"	"29"	"0"	"4.327E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"751.91608"	"1502.82488"	"1502.82552"	"-0.42"	"-0.00032"	"8/72"	"8"	"72"	"609313.275939941"	"HCD"	"MS2"	"0"	"50.1"	"100.000"	"94.9954"	"33571"	"33571"	"33548"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.5"	""	"54.1"	""	"55.7"	""	"87.0"	"0.0"	"115.5"	"110.0"	""	"947"	"56"	"36.000"	"29.000"	"0.000128623399379531"	"28"	"0"	"7.878E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"501.61316"	"1502.82492"	"1502.82552"	"-0.39"	"-0.00020"	"10/72"	"10"	"72"	"7763636.11779785"	"HCD"	"MS2"	"4.296566"	"226.4"	"100.000"	"95.3487"	"33682"	"33682"	"33665"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.2"	""	"203.0"	""	"265.5"	""	"384.3"	""	"540.9"	"539.5"	""	"947"	"33"	"36.000"	"29.000"	"0.022352185003831"	"24"	"0.0001686"	"0.001147"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7636"	"0.0000"	"1"	"1"	"1"	"751.91620"	"1502.82512"	"1502.82552"	"-0.26"	"-0.00020"	"8/72"	"8"	"72"	"448213.031860352"	"HCD"	"MS2"	"0"	"39.1"	"100.000"	"95.0028"	"33541"	"33541"	"33516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.7"	""	"38.1"	""	"39.6"	""	"73.4"	""	"85.2"	"87.4"	""	"947"	"55"	"36.000"	"29.000"	"0.000140061890291216"	"29"	"0"	"6.742E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"501.61359"	"1502.82621"	"1502.82552"	"0.46"	"0.00023"	"10/72"	"10"	"72"	"8085095.35784912"	"HCD"	"MS2"	"4.266375"	"221.4"	"100.000"	"95.3140"	"33700"	"33700"	"33680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.0"	""	"200.8"	""	"262.0"	""	"374.5"	""	"534.7"	"523.3"	""	"960"	"32"	"36.000"	"29.000"	"0.0290563619881878"	"24"	"9.9E-05"	"0.0009229"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAEDAPWK"	"[K].dLAEDAPWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"751.91681"	"1502.82634"	"1502.82552"	"0.55"	"0.00041"	"16/72"	"16"	"72"	"4576755.46594238"	"HCD"	"MS2"	"0"	"338.6"	"100.000"	"95.3114"	"33699"	"33699"	"33680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"342.2"	""	"297.8"	""	"387.5"	""	"589.4"	"3.1"	"801.8"	"802.5"	""	"960"	"55"	"36.000"	"29.000"	"0.000157848782820472"	"27"	"0"	"0.0001255"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGHPDTLNK"	"[K].yGHPDTLNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"501.61688"	"1502.83609"	"1502.83675"	"-0.44"	"-0.00022"	"12/68"	"12"	"68"	"10950671.0275879"	"HCD"	"MS2"	"35.64835"	"360.0"	"100.000"	"36.6173"	"9925"	"9925"	"9913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"359.4"	""	"285.2"	""	"309.6"	""	"883.3"	"2.4"	"822.7"	"763.4"	""	"954"	"29"	"36.000"	"29.000"	"0.0624479777270718"	"20"	"0.001348"	"0.01109"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGHPDTLNK"	"[K].yGHPDTLNk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"P50116"	"Protein S100-A9 OS=Rattus norvegicus OX=10116 GN=S100a9 PE=1 SV=3"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"501.61716"	"1502.83692"	"1502.83675"	"0.11"	"0.00006"	"12/68"	"12"	"68"	"11893957.5870972"	"HCD"	"MS2"	"31.60335"	"394.2"	"100.000"	"36.7388"	"9937"	"9937"	"9918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"367.6"	""	"325.6"	""	"336.8"	""	"943.9"	"0.8"	"891.2"	"887.3"	""	"947"	"32"	"36.000"	"29.000"	"0.0302914444601034"	"22"	"0.001348"	"0.01123"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTSEIAVLQSR"	"[K].aVTSEIAVLQSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"501.62912"	"1502.87281"	"1502.87397"	"-0.78"	"-0.00039"	"14/108"	"14"	"108"	"824489.830383301"	"HCD"	"MS2"	"22.40035"	"15.2"	"100.000"	"89.3070"	"31242"	"31242"	"31225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"21.1"	""	"18.2"	""	"24.3"	""	"31.1"	"32.7"	""	"821"	"50"	"36.000"	"29.000"	"0.000453224273469801"	"26"	"0"	"2.445E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTSEIAVLQSR"	"[K].aVTSEIAVLQSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8600"	"0.0000"	"1"	"1"	"1"	"751.94073"	"1502.87419"	"1502.87397"	"0.15"	"0.00011"	"11/108"	"11"	"108"	"659501.295959473"	"HCD"	"MS2"	"5.188698"	"27.8"	"100.000"	"89.2700"	"31227"	"31227"	"31209"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"28.2"	""	"33.1"	""	"52.8"	"1.7"	"58.6"	"57.0"	""	"817"	"50"	"36.000"	"29.000"	"0.0003856488679628"	"23"	"0"	"3.616E-07"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTSEIAVLQSR"	"[K].aVTSEIAVLQSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"751.94086"	"1502.87444"	"1502.87397"	"0.31"	"0.00023"	"9/108"	"9"	"108"	"573019.815734863"	"HCD"	"MS2"	"11.80963"	"25.7"	"100.000"	"89.1812"	"31231"	"31231"	"31213"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.8"	""	"26.2"	""	"29.1"	""	"51.2"	""	"55.1"	"59.2"	""	"817"	"42"	"36.000"	"29.000"	"0.00267418877106482"	"17"	"0"	"6.699E-06"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLNLIK"	"[R].sEIDLNLIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"751.96228"	"1502.91728"	"1502.91942"	"-1.42"	"-0.00107"	"12/76"	"12"	"76"	"281856.426635742"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"100.8291"	"35902"	"35902"	"35881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.9"	""	"26.2"	""	"36.9"	""	"31.9"	""	"39.6"	"37.4"	""	"746"	"34"	"35.000"	"28.000"	"0.0143783427409333"	"22"	"0.0001991"	"0.002958"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDLNLIK"	"[R].sEIDLNLIk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"2"	"2"	"0.3846"	"0.0000"	"1"	"1"	"1"	"751.96381"	"1502.92034"	"1502.91942"	"0.61"	"0.00046"	"5/76"	"5"	"76"	"205558.414367676"	"HCD"	"MS2"	"21.64152"	"17.1"	"100.000"	"100.9390"	"35974"	"35974"	"35953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"21.2"	""	"24.7"	""	"30.0"	""	"29.0"	"30.0"	""	"714"	"26"	"35.000"	"28.000"	"0.0930396817349606"	""	"0.003043"	"0.03287"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"752.38110"	"1503.75493"	"1503.75876"	"-2.55"	"-0.00191"	"7/80"	"7"	"80"	"372358.950866699"	"HCD"	"MS2"	"0"	"40.0"	"100.000"	"77.1501"	"26369"	"26369"	"26352"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"63.2"	""	"43.0"	""	"56.6"	""	"64.3"	"72.5"	""	"626"	"36"	"34.000"	"27.000"	"0.00870050252808657"	"19"	"9.9E-05"	"0.0008265"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.38171"	"1503.75615"	"1503.75876"	"-1.73"	"-0.00130"	"14/80"	"14"	"80"	"3062704.7243042"	"HCD"	"MS2"	"0"	"315.5"	"100.000"	"77.4108"	"26441"	"26441"	"26427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"601.3"	""	"428.6"	""	"367.5"	""	"388.7"	""	"596.9"	"610.1"	""	"674"	"40"	"35.000"	"28.000"	"0.00362768776993254"	"23"	"0.0001686"	"0.001565"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"752.38202"	"1503.75676"	"1503.75876"	"-1.33"	"-0.00100"	"7/80"	"7"	"80"	"3436434.0546875"	"HCD"	"MS2"	"0"	"326.5"	"100.000"	"77.4206"	"26475"	"26475"	"26466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"662.9"	""	"449.7"	""	"372.1"	""	"409.0"	"1.8"	"603.9"	"590.9"	""	"685"	"37"	"35.000"	"28.000"	"0.00702523046247755"	"23"	"0.0001991"	"0.003389"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"752.38208"	"1503.75688"	"1503.75876"	"-1.25"	"-0.00094"	"7/80"	"7"	"80"	"1751979.45684814"	"HCD"	"MS2"	"0"	"180.3"	"100.000"	"77.7024"	"26586"	"26586"	"26575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"332.9"	""	"242.3"	""	"202.9"	""	"226.7"	""	"348.0"	"360.1"	""	"685"	"35"	"35.000"	"28.000"	"0.00990057859710174"	"21"	"0.0001686"	"0.001573"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"501.92386"	"1503.75702"	"1503.75876"	"-1.15"	"-0.00058"	"8/80"	"8"	"80"	"1118962.5369873"	"HCD"	"MS2"	"44.97903"	"39.9"	"100.000"	"77.6034"	"26519"	"26519"	"26503"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.7"	""	"48.2"	""	"43.4"	""	"58.7"	""	"78.6"	"81.0"	""	"685"	"18"	"35.000"	"28.000"	"0.585680245418423"	"16"	"0.004314"	"0.051"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"752.38239"	"1503.75749"	"1503.75876"	"-0.84"	"-0.00063"	"7/80"	"7"	"80"	"716124.689575195"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"77.1314"	"26330"	"26330"	"26314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.2"	""	"118.5"	""	"96.4"	""	"99.4"	""	"133.3"	"139.4"	""	"687"	"38"	"35.000"	"28.000"	"0.00553256775683736"	"23"	"9.9E-05"	"0.0004645"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"752.38245"	"1503.75762"	"1503.75876"	"-0.76"	"-0.00057"	"7/80"	"7"	"80"	"1021612.06591797"	"HCD"	"MS2"	"0"	"113.4"	"100.000"	"77.6860"	"26552"	"26552"	"26540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"216.2"	""	"147.8"	""	"124.6"	""	"139.3"	"0.1"	"220.0"	"226.9"	""	"687"	"38"	"35.000"	"28.000"	"0.00536941215247167"	"22"	"9.9E-05"	"0.0007713"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.38257"	"1503.75786"	"1503.75876"	"-0.60"	"-0.00045"	"8/80"	"8"	"80"	"160019.684143066"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"78.0036"	"26709"	"26709"	"26685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.4"	""	"23.1"	""	"22.6"	""	"25.0"	"1.5"	"33.2"	"39.5"	""	"690"	"16"	"35.000"	"28.000"	"0.860635180795318"	"14"	"0.009411"	"0.1231"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"501.92450"	"1503.75895"	"1503.75876"	"0.12"	"0.00006"	"8/80"	"8"	"80"	"1425389.95477295"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"77.3817"	"26459"	"26459"	"26447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.8"	""	"68.3"	""	"64.4"	""	"70.4"	""	"96.9"	"94.1"	""	"676"	"25"	"35.000"	"28.000"	"0.100905932519427"	"25"	"0.002035"	"0.018"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNCELYEK"	"[K].tNcELYEk.[L]"	"N-Term(TMT6plex); C3(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"501.92456"	"1503.75913"	"1503.75876"	"0.25"	"0.00012"	"8/80"	"8"	"80"	"564267.812561035"	"HCD"	"MS2"	"100"	"24.3"	"100.000"	"77.2850"	"26391"	"26391"	"26372"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"36.4"	""	"29.2"	""	"34.4"	""	"49.8"	"42.1"	""	"676"	"13"	"35.000"	"28.000"	"1.53079382007424"	"13"	"0.001453"	"0.01173"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"752.39093"	"1503.77458"	"1503.77532"	"-0.49"	"-0.00037"	"8/108"	"8"	"108"	"318119.884887695"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"60.0962"	"19421"	"19421"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"20.5"	""	"26.1"	""	"27.9"	""	"33.9"	"37.6"	""	"796"	"40"	"35.000"	"29.000"	"0.00390735681321954"	"25"	"0"	"4.832E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"752.39093"	"1503.77458"	"1503.77532"	"-0.49"	"-0.00037"	"10/108"	"10"	"108"	"950535.142028809"	"HCD"	"MS2"	"0"	"49.6"	"100.000"	"60.2114"	"19501"	"19501"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.5"	""	"56.7"	""	"65.2"	""	"81.2"	"0.8"	"99.2"	"85.7"	""	"796"	"45"	"35.000"	"29.000"	"0.00133316244784815"	""	"0"	"1.843E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"752.39099"	"1503.77471"	"1503.77532"	"-0.41"	"-0.00031"	"5/108"	"5"	"108"	"219147.133850098"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"60.5129"	"19623"	"19623"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"19.3"	""	"17.5"	""	"21.9"	"2.4"	"27.7"	"24.9"	""	"796"	"27"	"35.000"	"29.000"	"0.0783218743303324"	""	"0.0001686"	"0.00123"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"752.39166"	"1503.77605"	"1503.77532"	"0.48"	"0.00036"	"9/108"	"9"	"108"	"173638.319702148"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"59.8773"	"19365"	"19365"	"19342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"13.5"	""	"15.3"	""	"28.2"	""	"25.8"	"23.3"	""	"809"	"21"	"36.000"	"29.000"	"0.349074822571739"	""	"0.001488"	"0.01264"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIWDTAGQER"	"[K].aQIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.5854"	"0.0000"	"1"	"1"	"1"	"752.39191"	"1503.77654"	"1503.77532"	"0.81"	"0.00061"	"8/108"	"8"	"108"	"874136.615112305"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"60.3957"	"19542"	"19542"	"19524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.0"	""	"61.8"	""	"54.3"	""	"75.1"	"1.4"	"94.6"	"85.0"	""	"810"	"41"	"36.000"	"29.000"	"0.00333775936580266"	""	"0"	"9.352E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"501.93924"	"1503.80317"	"1503.80384"	"-0.45"	"-0.00023"	"9/106"	"9"	"106"	"945458.429321289"	"HCD"	"MS2"	"47.76618"	"29.7"	"100.000"	"72.4756"	"24441"	"24441"	"24416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.3"	""	"29.0"	""	"34.5"	""	"56.8"	"1.0"	"66.6"	"59.3"	""	"1021"	"21"	"37.000"	"30.000"	"0.392641089766315"	"19"	"0"	"0.0001247"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"752.40540"	"1503.80351"	"1503.80384"	"-0.22"	"-0.00017"	"9/106"	"9"	"106"	"523382.247131348"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"72.5125"	"24456"	"24456"	"24432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.7"	""	"40.8"	""	"56.4"	""	"34.7"	"1.4"	"62.1"	"60.6"	""	"1016"	"47"	"37.000"	"30.000"	"0.00107860818669611"	"21"	"0"	"2.479E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"501.93936"	"1503.80353"	"1503.80384"	"-0.21"	"-0.00010"	"11/106"	"11"	"106"	"1006742.7911377"	"HCD"	"MS2"	"50.11035"	"28.9"	"100.000"	"72.5553"	"24503"	"24503"	"24478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"33.9"	""	"39.1"	""	"49.9"	""	"63.4"	"61.4"	""	"1016"	"25"	"37.000"	"30.000"	"0.143834713386608"	"21"	"0"	"6.756E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"752.40552"	"1503.80376"	"1503.80384"	"-0.06"	"-0.00004"	"9/106"	"9"	"106"	"601946.043762207"	"HCD"	"MS2"	"3.059672"	"36.8"	"100.000"	"72.5876"	"24516"	"24516"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.2"	""	"53.5"	""	"60.5"	""	"39.4"	"0.4"	"68.8"	"66.5"	""	"1020"	"37"	"37.000"	"30.000"	"0.0112867830189888"	"23"	"0"	"6.105E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"501.93954"	"1503.80408"	"1503.80384"	"0.16"	"0.00008"	"14/106"	"14"	"106"	"995554.439147949"	"HCD"	"MS2"	"43.2722"	"30.3"	"100.000"	"72.1224"	"24298"	"24298"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"36.0"	""	"42.4"	""	"53.6"	"1.3"	"66.9"	"53.8"	""	"1001"	"31"	"36.000"	"30.000"	"0.0431920763157368"	"20"	"0"	"8.632E-06"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"752.40570"	"1503.80412"	"1503.80384"	"0.19"	"0.00014"	"10/106"	"10"	"106"	"1080843.09851074"	"HCD"	"MS2"	"5.164209"	"59.0"	"100.000"	"72.1780"	"24321"	"24321"	"24304"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.1"	""	"88.0"	""	"103.8"	""	"51.1"	"2.7"	"104.5"	"100.3"	""	"1004"	"43"	"37.000"	"30.000"	"0.00249864016659426"	"20"	"0"	"3.182E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"501.93958"	"1503.80417"	"1503.80384"	"0.22"	"0.00011"	"7/106"	"7"	"106"	"1087684.77203369"	"HCD"	"MS2"	"44.65004"	"28.5"	"100.000"	"72.2510"	"24380"	"24380"	"24358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"39.4"	""	"42.8"	""	"40.1"	""	"53.8"	"57.3"	""	"1004"	"27"	"37.000"	"30.000"	"0.105124445283715"	"20"	"0"	"4.205E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMTEALGPGTIR"	"[K].eMTEALGPGTIR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"752.40601"	"1503.80474"	"1503.80384"	"0.59"	"0.00045"	"10/106"	"10"	"106"	"911410.026977539"	"HCD"	"MS2"	"5.155545"	"47.3"	"100.000"	"72.2740"	"24389"	"24389"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.7"	""	"61.1"	""	"82.6"	""	"48.4"	"1.7"	"76.9"	"90.7"	""	"1001"	"37"	"36.000"	"30.000"	"0.00982661818556441"	"17"	"0"	"0.000108"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESAIEALK"	"[R].nAESAIEALk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"752.44006"	"1503.87285"	"1503.87828"	"-3.61"	"-0.00271"	"15/98"	"15"	"98"	"231029.458740234"	"HCD"	"MS2"	"29.35922"	"19.3"	"100.000"	"93.0247"	"32775"	"32775"	"32753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"21.6"	""	"22.6"	""	"33.2"	""	"47.8"	"43.5"	""	"946"	"41"	"36.000"	"29.000"	"0.00355517628870611"	"22"	"0"	"5.557E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAQETLNK"	"[K].lEAQETLNk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5BJK8"	"Golgi integral membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Golim4 PE=1 SV=2"	"Q5BJK8"	"Golgi integral membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Golim4 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"752.44202"	"1503.87676"	"1503.87828"	"-1.01"	"-0.00076"	"6/82"	"6"	"82"	"198582.436889648"	"HCD"	"MS2"	"16.74764"	"19.2"	"100.000"	"61.5248"	"20033"	"20033"	"20006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"16.5"	""	"17.8"	""	"40.8"	"1.2"	"41.5"	"40.0"	""	"952"	"18"	"36.000"	"29.000"	"0.829100071734408"	"21"	"0.001615"	"0.01332"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAESAIEALK"	"[R].nAESAIEALk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"P18596"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Rattus norvegicus OX=10116 GN=Atp2a3 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"752.44257"	"1503.87786"	"1503.87828"	"-0.28"	"-0.00021"	"11/98"	"11"	"98"	"196291.800964355"	"HCD"	"MS2"	"44.95222"	"19.0"	"100.000"	"93.0932"	"32767"	"32767"	"32742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"18.4"	""	"17.5"	""	"37.7"	"1.5"	"40.8"	"43.4"	""	"934"	"34"	"36.000"	"29.000"	"0.0183787885237848"	"20"	"9.9E-05"	"0.0008664"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDTVEVLK"	"[K].eLDTVEVLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"752.45422"	"1503.90117"	"1503.90343"	"-1.50"	"-0.00113"	"6/74"	"6"	"74"	"245356.077392578"	"HCD"	"MS2"	"11.41645"	"23.7"	"100.000"	"98.2041"	"34868"	"34868"	"34856"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"21.3"	""	"26.4"	""	"39.3"	""	"51.4"	"57.5"	""	"800"	"18"	"36.000"	"29.000"	"0.591643355267283"	"24"	"0.003786"	"0.04036"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDTVEVLK"	"[K].eLDTVEVLk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"Q4G017"	"Nischarin OS=Rattus norvegicus OX=10116 GN=Nisch PE=2 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"752.45514"	"1503.90300"	"1503.90343"	"-0.29"	"-0.00021"	"6/74"	"6"	"74"	"257921.983764648"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"98.2613"	"34860"	"34860"	"34840"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"26.2"	""	"36.1"	""	"51.3"	"1.4"	"55.9"	"50.1"	""	"801"	"33"	"36.000"	"29.000"	"0.0224699714401004"	""	"9.9E-05"	"0.0006133"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDGWVTTDPR"	"[R].dNDGWVTTDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8197"	"0.0000"	"1"	"1"	"1"	"752.86450"	"1504.72173"	"1504.72295"	"-0.81"	"-0.00061"	"7/114"	"7"	"114"	"271703.823181152"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"53.0759"	"16569"	"16569"	"16538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.8"	""	"15.4"	""	"12.4"	""	"25.9"	""	"33.3"	"25.9"	""	"417"	"61"	"33.000"	"26.000"	"1.59626892540997E-05"	""	"0"	"9.571E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNDGWVTTDPR"	"[R].dNDGWVTTDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"752.86523"	"1504.72319"	"1504.72295"	"0.16"	"0.00012"	"7/114"	"7"	"114"	"267217.690368652"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"52.7308"	"16462"	"16462"	"16436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.8"	""	"14.0"	""	"12.9"	""	"27.7"	"1.2"	"33.2"	"27.4"	""	"421"	"51"	"33.000"	"26.000"	"0.000163776693993879"	"24"	"0"	"6.146E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYYTNEAK"	"[K].gTYYTNEAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"752.90594"	"1504.80461"	"1504.80478"	"-0.11"	"-0.00008"	"8/80"	"8"	"80"	"684825.350402832"	"HCD"	"MS2"	"0"	"74.3"	"100.000"	"41.1058"	"11744"	"11744"	"11724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.8"	""	"88.7"	""	"100.9"	""	"100.4"	""	"160.9"	"156.2"	""	"917"	"53"	"36.000"	"29.000"	"0.000228738537500416"	""	"0"	"2.652E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTYYTNEAK"	"[K].gTYYTNEAk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"Q6XFR6"	"Glycophorin-C OS=Rattus norvegicus OX=10116 GN=Gypc PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"752.90631"	"1504.80535"	"1504.80478"	"0.38"	"0.00028"	"8/80"	"8"	"80"	"858041.350585938"	"HCD"	"MS2"	"0"	"88.3"	"100.000"	"41.2912"	"11782"	"11782"	"11758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.8"	""	"117.1"	""	"116.5"	""	"119.0"	""	"187.7"	"176.8"	""	"910"	"51"	"36.000"	"29.000"	"0.000383717314782745"	""	"0"	"5.307E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"752.91211"	"1504.81694"	"1504.81938"	"-1.62"	"-0.00122"	"20/98"	"20"	"98"	"1014218.87005615"	"HCD"	"MS2"	"0"	"86.2"	"100.000"	"39.1843"	"10969"	"10969"	"10950"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.1"	""	"120.1"	""	"124.8"	""	"98.7"	""	"170.8"	"159.9"	""	"992"	"70"	"36.000"	"29.000"	"5.15800402251214E-06"	"25"	"0"	"1.02E-08"	"1.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"502.27734"	"1504.81748"	"1504.81938"	"-1.27"	"-0.00064"	"12/98"	"12"	"98"	"4749674.95831299"	"HCD"	"MS2"	"22.26608"	"182.4"	"100.000"	"39.5234"	"11104"	"11104"	"11092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"256.1"	""	"240.8"	""	"238.8"	""	"245.3"	""	"361.1"	"390.6"	""	"1003"	"41"	"37.000"	"30.000"	"0.00424884548191509"	"25"	"0"	"9.78E-07"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"752.91248"	"1504.81767"	"1504.81938"	"-1.14"	"-0.00085"	"11/98"	"11"	"98"	"2281302.51025391"	"HCD"	"MS2"	"0"	"175.2"	"100.000"	"39.5228"	"11069"	"11069"	"11054"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.5"	""	"226.7"	""	"237.6"	""	"179.3"	""	"354.8"	"376.4"	""	"1003"	"65"	"37.000"	"30.000"	"1.43308165750254E-05"	"24"	"0"	"1.589E-07"	"1.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8923"	"0.0000"	"1"	"1"	"1"	"752.91266"	"1504.81804"	"1504.81938"	"-0.89"	"-0.00067"	"9/98"	"9"	"98"	"2282417.55688477"	"HCD"	"MS2"	"0"	"179.7"	"100.000"	"39.4592"	"11079"	"11079"	"11065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"291.2"	""	"237.0"	""	"247.3"	""	"186.0"	"2.8"	"348.7"	"391.5"	""	"995"	"65"	"36.000"	"29.000"	"1.46484976281488E-05"	"23"	"0"	"1.296E-07"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9273"	"0.0000"	"1"	"1"	"1"	"752.91278"	"1504.81828"	"1504.81938"	"-0.73"	"-0.00055"	"9/98"	"9"	"98"	"322411.722412109"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"39.8254"	"11191"	"11191"	"11170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.7"	""	"40.1"	""	"49.9"	""	"35.7"	""	"59.4"	"73.4"	""	"1034"	"55"	"37.000"	"30.000"	"0.000157939421553242"	"20"	"0"	"0.0001745"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"752.91327"	"1504.81926"	"1504.81938"	"-0.08"	"-0.00006"	"9/98"	"9"	"98"	"336689.61126709"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"39.7732"	"11204"	"11204"	"11183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"35.7"	""	"39.0"	""	"36.1"	"0.5"	"56.3"	"74.4"	""	"1042"	"67"	"37.000"	"30.000"	"1.03237558044446E-05"	"20"	"0"	"6.266E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"752.91333"	"1504.81938"	"1504.81938"	"0.00"	"0.00000"	"11/98"	"11"	"98"	"871584.141479492"	"HCD"	"MS2"	"0"	"77.0"	"100.000"	"39.2349"	"10955"	"10955"	"10932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.1"	""	"101.2"	""	"108.0"	""	"78.8"	"2.2"	"150.9"	"153.7"	""	"1040"	"70"	"37.000"	"30.000"	"4.77532950171461E-06"	"24"	"0"	"2.911E-08"	"1.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"752.92371"	"1504.84014"	"1504.84117"	"-0.68"	"-0.00051"	"8/74"	"8"	"74"	"1490448.24536133"	"HCD"	"MS2"	"32.74799"	"100.5"	"100.000"	"91.3792"	"32076"	"32076"	"32058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"189.7"	""	"151.7"	""	"130.3"	""	"155.0"	""	"158.8"	"164.8"	""	"1038"	"21"	"37.000"	"30.000"	"0.397344638986942"	"22"	"9.9E-05"	"0.0006068"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"502.28491"	"1504.84018"	"1504.84117"	"-0.65"	"-0.00033"	"10/74"	"10"	"74"	"1931552.15570068"	"HCD"	"MS2"	"12.4052"	"61.1"	"100.000"	"91.6449"	"32184"	"32184"	"32164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.6"	""	"97.3"	""	"80.5"	""	"88.5"	""	"106.7"	"97.8"	""	"1038"	"31"	"37.000"	"30.000"	"0.0408476764851756"	"22"	"0.0001991"	"0.002764"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"752.92413"	"1504.84099"	"1504.84117"	"-0.12"	"-0.00009"	"12/74"	"12"	"74"	"1412771.30157471"	"HCD"	"MS2"	"29.20541"	"87.0"	"100.000"	"91.2838"	"32074"	"32074"	"32057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.3"	""	"141.2"	""	"102.6"	""	"142.5"	""	"150.2"	"133.4"	""	"1028"	"20"	"37.000"	"30.000"	"0.497694818118282"	"22"	"9.9E-05"	"0.0005334"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"752.92419"	"1504.84111"	"1504.84117"	"-0.04"	"-0.00003"	"8/74"	"8"	"74"	"2447113.54333496"	"HCD"	"MS2"	"1.055875"	"200.1"	"100.000"	"91.5954"	"32200"	"32200"	"32182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.0"	""	"328.4"	""	"268.2"	""	"262.2"	""	"340.6"	"341.5"	""	"1025"	"54"	"37.000"	"30.000"	"0.000186506456015194"	"26"	"0"	"3.977E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"752.92450"	"1504.84172"	"1504.84117"	"0.37"	"0.00028"	"14/74"	"14"	"74"	"2425493.296875"	"HCD"	"MS2"	"0"	"201.6"	"100.000"	"91.6748"	"32197"	"32197"	"32180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"349.4"	""	"315.1"	""	"256.4"	""	"273.4"	""	"347.9"	"370.5"	""	"1023"	"46"	"37.000"	"30.000"	"0.00121855640857697"	"25"	"0"	"0.0001472"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVEGWDAEK"	"[R].iVEGWDAEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"502.28549"	"1504.84192"	"1504.84117"	"0.50"	"0.00025"	"10/74"	"10"	"74"	"2053247.41204834"	"HCD"	"MS2"	"10.50121"	"63.5"	"100.000"	"91.5632"	"32187"	"32187"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.6"	""	"99.6"	""	"85.7"	""	"99.1"	"0.8"	"107.7"	"104.3"	""	"1014"	"34"	"37.000"	"30.000"	"0.0207017928870675"	"24"	"0.0001991"	"0.005234"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VELEDWAGK"	"[R].vELEDWAGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"752.92474"	"1504.84221"	"1504.84117"	"0.69"	"0.00052"	"9/70"	"9"	"70"	"162878.577514648"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"102.2201"	"36465"	"36465"	"36443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.9"	""	"21.4"	""	"16.8"	""	"31.6"	""	"27.3"	"27.2"	""	"1012"	"21"	"37.000"	"30.000"	"0.43266375671965"	"21"	"0.004234"	"0.04904"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQDQISNIK"	"[K].tQDQISNIk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"752.93982"	"1504.87236"	"1504.87353"	"-0.77"	"-0.00058"	"8/88"	"8"	"88"	"622203.948425293"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"50.2249"	"15411"	"15411"	"15382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.1"	""	"52.3"	""	"59.6"	""	"137.4"	"1.0"	"112.7"	"90.0"	""	"954"	"57"	"36.000"	"29.000"	"0.000104356229462394"	"27"	"0"	"4.682E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQDQISNIK"	"[K].tQDQISNIk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8070"	"0.0000"	"1"	"1"	"1"	"752.94043"	"1504.87358"	"1504.87353"	"0.04"	"0.00003"	"8/88"	"8"	"88"	"623628.277954102"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"49.8304"	"15285"	"15285"	"15260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.3"	""	"60.7"	""	"64.1"	""	"128.1"	""	"108.4"	"109.7"	""	"938"	"57"	"36.000"	"29.000"	"0.000101665322516044"	"27"	"0"	"5.489E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATWVVDVK"	"[K].eATWVVDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"752.94189"	"1504.87651"	"1504.87755"	"-0.69"	"-0.00052"	"8/76"	"8"	"76"	"891811.48223877"	"HCD"	"MS2"	"4.029676"	"72.5"	"100.000"	"98.6751"	"35057"	"35057"	"35041"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.7"	""	"97.1"	""	"100.3"	""	"114.8"	"1.3"	"131.7"	"127.2"	""	"959"	"14"	"36.000"	"29.000"	"1.72897459328878"	"19"	"0.0001991"	"0.004893"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATWVVDVK"	"[K].eATWVVDVk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"P11915"	"Non-specific lipid-transfer protein OS=Rattus norvegicus OX=10116 GN=Scp2 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"752.94226"	"1504.87724"	"1504.87755"	"-0.20"	"-0.00015"	"7/76"	"7"	"76"	"726754.593505859"	"HCD"	"MS2"	"12.01423"	"58.9"	"100.000"	"98.6120"	"35002"	"35002"	"34984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.6"	""	"87.3"	""	"85.1"	""	"91.8"	""	"102.5"	"100.9"	""	"936"	"8"	"36.000"	"29.000"	"7.0997957197097"	"18"	"0.001217"	"0.009477"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVVPNEVVVQR"	"[K].hVVPNEVVVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.8776"	"0.0000"	"1"	"1"	"1"	"502.29767"	"1504.87845"	"1504.87973"	"-0.85"	"-0.00042"	"9/92"	"9"	"92"	"13971538.2786865"	"HCD"	"MS2"	"10.5509"	"136.3"	"87.611"	"40.2411"	"11359"	"11359"	"11342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.9"	""	"171.2"	""	"182.4"	""	"211.3"	""	"256.5"	"283.8"	""	"895"	"49"	"36.000"	"29.000"	"0.00052576665583544"	"22"	"0"	"0.0001716"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVVPNEVVVQR"	"[K].hVVPNEVVVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.94287"	"1504.87847"	"1504.87973"	"-0.84"	"-0.00063"	"4/92"	"4"	"92"	"285894.389282227"	"HCD"	"MS2"	"100"	"15.2"	"100.000"	"40.2642"	"11369"	"11369"	"11342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"18.8"	""	"20.1"	""	"26.7"	""	"26.7"	"29.7"	""	"895"	"10"	"36.000"	"29.000"	"4.27359182244593"	"13"	"0.002799"	"0.02962"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVVPNEVVVQR"	"[K].hVVPNEVVVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"502.29782"	"1504.87891"	"1504.87973"	"-0.54"	"-0.00027"	"8/92"	"8"	"92"	"11854291.749939"	"HCD"	"MS2"	"19.14472"	"163.7"	"100.000"	"40.1247"	"11346"	"11346"	"11325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"219.9"	""	"204.3"	""	"207.1"	""	"276.3"	""	"293.3"	"355.1"	""	"891"	"51"	"36.000"	"29.000"	"0.000373979423994392"	"22"	"0"	"0.0002341"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVVPNEVVVQR"	"[K].hVVPNEVVVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"752.94379"	"1504.88030"	"1504.87973"	"0.38"	"0.00028"	"7/92"	"7"	"92"	"340207.217224121"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"40.2120"	"11382"	"11382"	"11354"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"17.1"	""	"24.1"	""	"23.8"	""	"32.2"	"27.0"	""	"948"	"25"	"36.000"	"29.000"	"0.147835366286053"	"16"	"0.0007633"	"0.007492"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQDEIISKTK"	"[K].lTQDEIISKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"1"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"752.95197"	"1504.89665"	"1504.87839"	"12.14"	"0.00913"	"16/112"	"16"	"112"	"409966.590820313"	"HCD"	"MS2"	"4.995421"	"35.8"	"100.000"	"82.0216"	"28314"	"28314"	"28295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.7"	""	"36.9"	""	"37.1"	""	"65.9"	"1.4"	"74.9"	"79.2"	""	"751"	"65"	"35.000"	"28.000"	"1.2606947414823E-05"	""	"0.0009352"	"0.008124"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTQDEIISKTK"	"[K].lTQDEIISKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"P37285"	"Kinesin light chain 1 OS=Rattus norvegicus OX=10116 GN=Klc1 PE=1 SV=2"	"1"	"2"	"2"	"0.1296"	"0.0000"	"1"	"1"	"1"	"752.95215"	"1504.89702"	"1504.87839"	"12.38"	"0.00932"	"14/112"	"14"	"112"	"283813.873718262"	"HCD"	"MS2"	"14.73"	"27.3"	"100.000"	"81.8089"	"28256"	"28256"	"28232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.4"	""	"37.7"	""	"36.3"	""	"39.8"	""	"51.2"	"58.5"	""	"750"	"54"	"35.000"	"28.000"	"0.000143890217059605"	""	"0.0001991"	"0.004743"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSLQEEVK"	"[R].iTSLQEEVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"752.95239"	"1504.89751"	"1504.89868"	"-0.78"	"-0.00059"	"8/82"	"8"	"82"	"238489.833679199"	"HCD"	"MS2"	"15.95494"	"20.8"	"100.000"	"80.8383"	"27835"	"27835"	"27814"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.7"	""	"25.4"	""	"27.5"	""	"33.0"	"1.1"	"41.8"	"41.9"	""	"754"	"52"	"35.000"	"28.000"	"0.000246797837623363"	"24"	"0"	"2.847E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSLQEEVK"	"[R].iTSLQEEVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"752.95245"	"1504.89763"	"1504.89868"	"-0.70"	"-0.00052"	"14/82"	"14"	"82"	"257733.818115234"	"HCD"	"MS2"	"10.6806"	"24.2"	"100.000"	"81.2119"	"28013"	"28013"	"27992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"31.2"	""	"26.6"	""	"36.9"	""	"47.6"	"52.2"	""	"754"	"41"	"35.000"	"28.000"	"0.00323103267651849"	"21"	"0"	"8.203E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSLQEEVK"	"[R].iTSLQEEVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"752.95282"	"1504.89836"	"1504.89868"	"-0.21"	"-0.00016"	"8/82"	"8"	"82"	"241334.150085449"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"81.1475"	"27960"	"27960"	"27939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"27.3"	""	"30.5"	""	"38.8"	""	"44.1"	"48.6"	""	"754"	"38"	"35.000"	"28.000"	"0.00634368121023566"	"20"	"0"	"5.784E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSLQEEVK"	"[R].iTSLQEEVk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"752.95306"	"1504.89885"	"1504.89868"	"0.11"	"0.00009"	"7/82"	"7"	"82"	"212058.19317627"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"80.9188"	"27895"	"27895"	"27871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.4"	""	"24.9"	""	"22.0"	""	"40.1"	""	"45.9"	"41.4"	""	"754"	"44"	"35.000"	"28.000"	"0.00135002356787694"	"24"	"0"	"9.452E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAmk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"753.37177"	"1505.73625"	"1505.73802"	"-1.18"	"-0.00088"	"8/66"	"8"	"66"	"437857.054748535"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"37.8406"	"10421"	"10421"	"10394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.5"	""	"24.7"	""	"31.0"	""	"82.5"	"0.4"	"51.6"	"48.5"	""	"508"	"37"	"34.000"	"27.000"	"0.00545548940429156"	"23"	"0.006074"	"0.07424"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAmk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"753.37189"	"1505.73650"	"1505.73802"	"-1.01"	"-0.00076"	"8/72"	"8"	"72"	"448457.130493164"	"HCD"	"MS2"	"37.86045"	"40.8"	"100.000"	"49.5887"	"15187"	"15187"	"15157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.9"	""	"48.8"	""	"57.4"	""	"63.8"	"0.5"	"79.9"	"85.3"	""	"508"	"33"	"34.000"	"27.000"	"0.0120735147389473"	"19"	"0.0003938"	"0.006277"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDmASAMk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"753.37219"	"1505.73711"	"1505.73802"	"-0.61"	"-0.00046"	"8/72"	"8"	"72"	"361877.487365723"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"46.4418"	"13910"	"13910"	"13895"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.2"	""	"49.8"	""	"49.7"	""	"44.0"	"2.0"	"68.3"	"59.5"	""	"508"	"31"	"34.000"	"27.000"	"0.0181064669652136"	"16"	"0.002419"	"0.02284"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDmASAMk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"753.37250"	"1505.73772"	"1505.73802"	"-0.20"	"-0.00015"	"11/72"	"11"	"72"	"268009.651550293"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"46.9306"	"14108"	"14108"	"14088"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.4"	""	"35.3"	""	"46.4"	""	"34.8"	""	"48.4"	"45.8"	""	"510"	"18"	"34.000"	"27.000"	"0.361027413889056"	"15"	"0.00452"	"0.0524"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMASAMK"	"[R].yDDMASAmk.[A]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"753.37250"	"1505.73772"	"1505.73802"	"-0.20"	"-0.00015"	"7/72"	"7"	"72"	"612146.636962891"	"HCD"	"MS2"	"28.07167"	"57.4"	"100.000"	"50.1121"	"15365"	"15365"	"15340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.5"	""	"60.7"	""	"66.6"	""	"102.8"	""	"117.6"	"112.4"	""	"510"	"19"	"34.000"	"27.000"	"0.355254984751052"	"20"	"0.001615"	"0.01398"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAmk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.37274"	"1505.73821"	"1505.73802"	"0.12"	"0.00009"	"10/66"	"10"	"66"	"185606.132995605"	"HCD"	"MS2"	"19.87085"	"14.0"	"100.000"	"38.1556"	"10550"	"10550"	"10519"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"16.0"	""	"18.1"	""	"29.1"	""	"26.6"	"27.3"	""	"505"	"17"	"34.000"	"27.000"	"0.452127978143912"	"14"	"0.006343"	"0.07893"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDDMAAAMK"	"[R].yDDmAAAmk.[AN]"	"N-Term(TMT6plex); M4(Oxidation); M8(Oxidation); K9(TMT6plex)"	"2"	"2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P35213; P61983"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.9355"	"0.0000"	"1"	"1"	"1"	"753.37329"	"1505.73931"	"1505.73802"	"0.85"	"0.00064"	"8/66"	"8"	"66"	"426816.858215332"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"37.9258"	"10420"	"10420"	"10394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.3"	""	"21.1"	""	"24.7"	""	"72.3"	""	"52.3"	"47.8"	""	"523"	"31"	"34.000"	"27.000"	"0.019075313893157"	"16"	"0.007069"	"0.09008"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"753.39215"	"1505.77703"	"1505.77974"	"-1.80"	"-0.00136"	"6/102"	"6"	"102"	"387117.844116211"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"66.4269"	"21990"	"21990"	"21976"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"25.7"	""	"28.9"	""	"36.3"	""	"44.5"	"46.6"	""	"858"	"26"	"36.000"	"29.000"	"0.0976016797801218"	"14"	"0.0001991"	"0.004647"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.59741"	"1505.77768"	"1505.77974"	"-1.36"	"-0.00069"	"11/102"	"11"	"102"	"1103443.55200195"	"HCD"	"MS2"	"33.56163"	"32.8"	"100.000"	"66.7822"	"22132"	"22132"	"22107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.0"	""	"39.0"	""	"37.9"	""	"56.0"	"0.8"	"57.7"	"69.8"	""	"863"	"22"	"36.000"	"29.000"	"0.245460039659118"	"14"	"0.0001991"	"0.002524"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"753.39252"	"1505.77776"	"1505.77974"	"-1.32"	"-0.00099"	"9/102"	"9"	"102"	"737111.732788086"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"66.5199"	"22060"	"22060"	"22048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.2"	""	"48.5"	""	"50.1"	""	"66.8"	""	"64.9"	"72.9"	""	"863"	"37"	"36.000"	"29.000"	"0.00897389120485245"	"19"	"0"	"0.0002689"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGVLTEGEGPR"	"[R].fDGVLTEGEGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8806"	"0.0000"	"1"	"1"	"1"	"753.39276"	"1505.77825"	"1505.77974"	"-0.99"	"-0.00075"	"10/102"	"10"	"102"	"454098.123596191"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"83.4454"	"28916"	"28916"	"28894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.6"	""	"42.6"	""	"44.9"	""	"50.4"	""	"54.9"	"58.4"	""	"886"	"67"	"36.000"	"29.000"	"8.40240723096539E-06"	"24"	"0"	"2.222E-07"	"1.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"502.59769"	"1505.77851"	"1505.77974"	"-0.82"	"-0.00041"	"10/102"	"10"	"102"	"1167541.14196777"	"HCD"	"MS2"	"46.0991"	"36.6"	"100.000"	"66.8246"	"22181"	"22181"	"22164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"46.3"	""	"52.4"	""	"65.0"	"0.1"	"69.0"	"73.1"	""	"881"	"20"	"36.000"	"29.000"	"0.401740774736278"	"14"	"0.0001991"	"0.003066"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"753.39313"	"1505.77898"	"1505.77974"	"-0.50"	"-0.00038"	"9/102"	"9"	"102"	"1000491.48596191"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"67.0144"	"22226"	"22226"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.2"	""	"60.7"	""	"75.9"	""	"82.2"	"0.4"	"92.1"	"80.5"	""	"886"	"55"	"36.000"	"29.000"	"0.000145011927831325"	"22"	"0"	"9.088E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGVLTEGEGPR"	"[R].fDGVLTEGEGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"753.39331"	"1505.77934"	"1505.77974"	"-0.26"	"-0.00020"	"10/102"	"10"	"102"	"463441.498046875"	"HCD"	"MS2"	"9.558772"	"29.9"	"100.000"	"83.4001"	"28869"	"28869"	"28848"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"37.1"	""	"46.9"	""	"52.8"	""	"46.1"	"57.0"	""	"880"	"76"	"36.000"	"29.000"	"1.18155155608974E-06"	"25"	"0"	"3.98E-08"	"1.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGVLTEGEGPR"	"[R].fDGVLTEGEGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"753.39337"	"1505.77947"	"1505.77974"	"-0.18"	"-0.00014"	"10/102"	"10"	"102"	"535048.065673828"	"HCD"	"MS2"	"34.68539"	"42.0"	"100.000"	"83.6908"	"28986"	"28986"	"28972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.3"	""	"58.1"	""	"58.2"	""	"65.9"	""	"71.2"	"79.6"	""	"879"	"46"	"36.000"	"29.000"	"0.00110397408664846"	"22"	"0"	"1.221E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"753.39349"	"1505.77971"	"1505.77974"	"-0.02"	"-0.00001"	"8/102"	"8"	"102"	"2264476.69842529"	"HCD"	"MS2"	"0"	"96.6"	"100.000"	"66.7294"	"22110"	"22110"	"22095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.7"	""	"125.1"	""	"125.0"	""	"154.6"	""	"168.1"	"157.5"	""	"889"	"45"	"36.000"	"29.000"	"0.00142518671474268"	"24"	"0"	"0.000189"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"753.39374"	"1505.78020"	"1505.77974"	"0.31"	"0.00023"	"8/102"	"8"	"102"	"2231435.98974609"	"HCD"	"MS2"	"0"	"99.2"	"100.000"	"66.8154"	"22177"	"22177"	"22164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.7"	""	"127.5"	""	"128.6"	""	"160.6"	"0.8"	"176.1"	"163.9"	""	"892"	"54"	"36.000"	"29.000"	"0.000173115063231829"	"21"	"0"	"1.472E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDGVLTEGEGPR"	"[R].fDGVLTEGEGPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"Q8R4A1"	"ERO1-like protein alpha OS=Rattus norvegicus OX=10116 GN=Ero1a PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"753.39380"	"1505.78032"	"1505.77974"	"0.39"	"0.00029"	"9/102"	"9"	"102"	"598528.975891113"	"HCD"	"MS2"	"27.29934"	"45.5"	"100.000"	"83.7522"	"29040"	"29040"	"29018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.3"	""	"56.3"	""	"69.1"	""	"82.3"	""	"75.8"	"82.4"	""	"892"	"37"	"36.000"	"29.000"	"0.0091061512332261"	"19"	"0"	"2.068E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQEDPDYGLR"	"[R].lAQEDPDYGLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"753.39398"	"1505.78069"	"1505.77974"	"0.63"	"0.00047"	"7/102"	"7"	"102"	"562077.696228027"	"HCD"	"MS2"	"7.744336"	"32.5"	"100.000"	"67.1190"	"22300"	"22300"	"22284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"37.3"	""	"37.9"	""	"57.2"	"2.4"	"57.0"	"62.5"	""	"893"	"42"	"36.000"	"29.000"	"0.00253408666314916"	"16"	"9.9E-05"	"0.0008745"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVTEISAADK"	"[K].gGVTEISAADk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8101"	"0.0000"	"1"	"1"	"1"	"753.43054"	"1505.85381"	"1505.85754"	"-2.48"	"-0.00187"	"10/92"	"10"	"92"	"668851.299255371"	"HCD"	"MS2"	"0"	"62.1"	"100.000"	"53.2326"	"16667"	"16667"	"16641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.6"	""	"78.6"	""	"62.2"	""	"105.2"	""	"121.8"	"150.4"	""	"1003"	"79"	"37.000"	"30.000"	"5.77126395055635E-07"	""	"0"	"8.963E-08"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVTEISAADK"	"[K].gGVTEISAADk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"753.43079"	"1505.85430"	"1505.85754"	"-2.16"	"-0.00162"	"10/92"	"10"	"92"	"646902.126647949"	"HCD"	"MS2"	"9.564292"	"56.7"	"100.000"	"53.5800"	"16775"	"16775"	"16745"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.5"	""	"68.5"	""	"72.0"	""	"89.1"	"1.1"	"120.5"	"131.5"	""	"1010"	"80"	"37.000"	"30.000"	"5.27583710706504E-07"	""	"0"	"3.543E-07"	"1.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVTEISAADK"	"[K].gGVTEISAADk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"753.43188"	"1505.85649"	"1505.85754"	"-0.70"	"-0.00053"	"10/92"	"10"	"92"	"206232.938781738"	"HCD"	"MS2"	"24.02035"	"20.8"	"100.000"	"53.5524"	"16797"	"16797"	"16775"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"24.4"	""	"26.6"	""	"32.1"	""	"45.3"	"42.9"	""	"973"	"17"	"36.000"	"29.000"	"0.873137909454023"	"21"	"0.003357"	"0.03786"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQQEDITK"	"[R].vSQQEDITk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"753.43207"	"1505.85686"	"1505.85754"	"-0.45"	"-0.00034"	"16/88"	"16"	"88"	"1424986.07989502"	"HCD"	"MS2"	"0"	"112.9"	"100.000"	"43.7987"	"12839"	"12839"	"12810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.5"	""	"117.1"	""	"137.5"	""	"184.5"	""	"211.1"	"226.6"	""	"971"	"61"	"36.000"	"29.000"	"4.20909990680614E-05"	"26"	"0"	"3.581E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSQQEDITK"	"[R].vSQQEDITk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"753.43213"	"1505.85698"	"1505.85754"	"-0.37"	"-0.00028"	"16/88"	"16"	"88"	"1409729.73980713"	"HCD"	"MS2"	"0"	"116.9"	"100.000"	"43.9774"	"12876"	"12876"	"12851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.6"	""	"127.8"	""	"140.6"	""	"205.2"	"1.6"	"221.2"	"216.2"	""	"964"	"58"	"36.000"	"29.000"	"7.17872039456661E-05"	"28"	"0"	"3.898E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVTEISAADK"	"[K].gGVTEISAADk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"O54975"	"Xaa-Pro aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Xpnpep1 PE=1 SV=1"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"753.43219"	"1505.85710"	"1505.85754"	"-0.29"	"-0.00022"	"7/92"	"7"	"92"	"229214.614379883"	"HCD"	"MS2"	"14.89272"	"25.9"	"100.000"	"53.8860"	"16900"	"16900"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.4"	""	"27.2"	""	"32.4"	""	"46.6"	"0.6"	"53.1"	"52.3"	""	"965"	"33"	"36.000"	"29.000"	"0.0229349246517404"	"15"	"0.0001686"	"0.001873"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEVYELLDSPGR"	"[K].TKEVYELLDSPGR.[V]"	""	"1"	"1"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"P51583"	"Multifunctional protein ADE2 OS=Rattus norvegicus OX=10116 GN=Paics PE=1 SV=3"	"1"	"2"	"2"	"0.2174"	"0.0000"	"1"	"1"	"1"	"753.90356"	"1506.79985"	"1506.77985"	"13.28"	"0.01000"	"9/136"	"9"	"136"	"346615.469055176"	"HCD"	"MS2"	"12.83901"	"20.6"	"100.000"	"98.3887"	"34941"	"34941"	"34923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"18.5"	""	"29.2"	""	"38.0"	""	"43.9"	"36.9"	"NoQuanLabels"	"986"	"69"	"36.000"	"29.000"	"6.91587156349046E-06"	""	"0.0001991"	"0.004013"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEEAMEQK"	"[R].aLEEAMEQk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"753.91583"	"1506.82439"	"1506.82380"	"0.39"	"0.00029"	"8/74"	"8"	"74"	"307288.812194824"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"74.5442"	"25313"	"25313"	"25290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"33.5"	""	"34.4"	""	"37.1"	"1.2"	"51.1"	"49.8"	""	"1102"	"38"	"37.000"	"30.000"	"0.0089156210074133"	"21"	"0"	"0.0001059"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.26559"	"1507.78223"	"1507.78332"	"-0.72"	"-0.00036"	"8/68"	"8"	"68"	"1111096.95141602"	"HCD"	"MS2"	"27.74378"	"42.8"	"100.000"	"83.9506"	"29120"	"29120"	"29100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.5"	""	"44.8"	""	"42.3"	""	"90.7"	""	"71.2"	"84.2"	""	"884"	"19"	"36.000"	"29.000"	"0.585358958556042"	"14"	"0.001615"	"0.01441"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"754.39490"	"1507.78252"	"1507.78332"	"-0.53"	"-0.00040"	"14/68"	"14"	"68"	"700978.311340332"	"HCD"	"MS2"	"0"	"71.3"	"100.000"	"84.2073"	"29223"	"29223"	"29203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.0"	""	"68.6"	""	"66.7"	""	"144.7"	""	"136.2"	"147.3"	""	"885"	"41"	"36.000"	"29.000"	"0.00383630630023011"	"16"	"9.9E-05"	"0.0006198"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.39508"	"1507.78288"	"1507.78332"	"-0.29"	"-0.00022"	"6/68"	"6"	"68"	"890268.235412598"	"HCD"	"MS2"	"0"	"93.2"	"100.000"	"84.1314"	"29164"	"29164"	"29146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.3"	""	"91.3"	""	"91.2"	""	"190.8"	"0.5"	"176.7"	"179.8"	""	"885"	"42"	"36.000"	"29.000"	"0.00276638916553241"	"15"	"9.9E-05"	"0.0007682"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"754.39520"	"1507.78313"	"1507.78332"	"-0.12"	"-0.00009"	"7/68"	"7"	"68"	"681291.750915527"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"83.8478"	"29050"	"29050"	"29034"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.2"	""	"74.1"	""	"63.2"	""	"138.9"	"0.2"	"140.2"	"124.4"	""	"882"	"39"	"36.000"	"29.000"	"0.006045588588787"	"18"	"0.0001686"	"0.001077"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"754.39532"	"1507.78337"	"1507.78332"	"0.04"	"0.00003"	"14/68"	"14"	"68"	"828749.368896484"	"HCD"	"MS2"	"3.871495"	"88.2"	"100.000"	"83.9116"	"29104"	"29104"	"29084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.0"	""	"90.3"	""	"84.3"	""	"184.4"	"0.6"	"163.8"	"164.9"	""	"880"	"42"	"36.000"	"29.000"	"0.00257900792386172"	"17"	"9.9E-05"	"0.0006762"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.26602"	"1507.78351"	"1507.78332"	"0.13"	"0.00007"	"8/68"	"8"	"68"	"1333437.97314453"	"HCD"	"MS2"	"52.63679"	"46.0"	"100.000"	"84.2283"	"29204"	"29204"	"29178"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.1"	""	"42.0"	""	"49.3"	""	"76.6"	""	"102.7"	"107.4"	""	"869"	"12"	"36.000"	"29.000"	"2.91064862791481"	"13"	"0.006925"	"0.08682"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYFEQYGK"	"[R].dYFEQYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"503.26630"	"1507.78434"	"1507.78332"	"0.68"	"0.00034"	"8/68"	"8"	"68"	"1040288.07385254"	"HCD"	"MS2"	"26.60614"	"42.2"	"100.000"	"83.9240"	"29080"	"29080"	"29061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.5"	""	"42.1"	""	"47.0"	""	"81.8"	""	"83.3"	"81.7"	""	"877"	"21"	"36.000"	"29.000"	"0.312586053710479"	"14"	"0.0004582"	"0.006488"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDDFVETGNIR"	"[K].lDDFVETGNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"754.40051"	"1507.79375"	"1507.79539"	"-1.09"	"-0.00082"	"6/94"	"6"	"94"	"221670.404846191"	"HCD"	"MS2"	"16.81201"	"15.0"	"100.000"	"99.1556"	"35251"	"35251"	"35228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"17.2"	""	"19.8"	""	"28.4"	""	"24.9"	"32.9"	""	"945"	"30"	"36.000"	"29.000"	"0.0509802326253594"	"15"	"0.0001686"	"0.001451"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"754.40106"	"1507.79485"	"1507.79876"	"-2.59"	"-0.00196"	"13/102"	"13"	"102"	"159288.167297363"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"75.4674"	"25657"	"25657"	"25631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.4"	""	"15.8"	""	"13.4"	""	"12.8"	""	"14.2"	"19.6"	""	"931"	"17"	"36.000"	"29.000"	"1.02075069740563"	"17"	"0.004392"	"0.05171"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40149"	"1507.79570"	"1507.79876"	"-2.03"	"-0.00153"	"6/102"	"6"	"102"	"151584.68951416"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"75.6046"	"25744"	"25744"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"14.6"	""	"12.2"	""	"13.3"	""	"16.9"	"19.4"	""	"943"	"17"	"36.000"	"29.000"	"0.976071645954977"	"14"	"0.004114"	"0.04475"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDDFVETGNIR"	"[K].lDDFVETGNIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"P27615"	"Lysosome membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Scarb2 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"754.40149"	"1507.79570"	"1507.79539"	"0.21"	"0.00016"	"6/94"	"6"	"94"	"228046.259887695"	"HCD"	"MS2"	"17.62614"	"15.9"	"100.000"	"99.1111"	"35203"	"35203"	"35183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"17.4"	""	"20.3"	""	"29.8"	""	"31.8"	"30.7"	""	"943"	"31"	"36.000"	"29.000"	"0.0410659332664292"	"24"	"0.0001686"	"0.001176"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40155"	"1507.79582"	"1507.79876"	"-1.95"	"-0.00147"	"6/102"	"6"	"102"	"186199.475097656"	"HCD"	"MS2"	"40.5099"	"14.7"	"100.000"	"73.3220"	"24786"	"24786"	"24762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"19.5"	""	"26.5"	""	"22.4"	""	"26.4"	"27.0"	""	"943"	"19"	"36.000"	"29.000"	"0.585439063029823"	"14"	"0.004234"	"0.04959"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"754.40179"	"1507.79631"	"1507.79876"	"-1.62"	"-0.00122"	"6/102"	"6"	"102"	"136263.988708496"	"HCD"	"MS2"	"100"	"11.3"	"100.000"	"65.0432"	"21461"	"21461"	"21434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"12.7"	""	"21.8"	""	"14.7"	""	"22.0"	"22.4"	""	"944"	"3"	"36.000"	"29.000"	"25.5824420269567"	"14"	"0.007379"	"0.09346"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"754.40179"	"1507.79631"	"1507.79876"	"-1.62"	"-0.00122"	"15/102"	"15"	"102"	"461525.176696777"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"57.3824"	"18350"	"18350"	"18325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"25.0"	""	"33.4"	""	"61.4"	""	"46.1"	"43.3"	""	"944"	"56"	"36.000"	"29.000"	"0.000126748257835082"	"23"	"0.0001991"	"0.003128"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40186"	"1507.79643"	"1507.79876"	"-1.54"	"-0.00116"	"11/102"	"11"	"102"	"176343.583740234"	"HCD"	"MS2"	"18.99787"	"13.9"	"100.000"	"76.2603"	"25979"	"25979"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"23.5"	""	"20.7"	""	"18.7"	""	"20.2"	"26.7"	""	"943"	"13"	"36.000"	"29.000"	"2.39597177167305"	"13"	"0.003317"	"0.03647"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"754.40198"	"1507.79668"	"1507.79876"	"-1.38"	"-0.00104"	"9/102"	"9"	"102"	"573271.108581543"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"57.7139"	"18450"	"18450"	"18423"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"32.8"	""	"35.7"	""	"69.4"	""	"48.5"	"44.0"	""	"945"	"51"	"36.000"	"29.000"	"0.000401237774454658"	"20"	"9.9E-05"	"0.001017"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"754.40210"	"1507.79692"	"1507.79876"	"-1.22"	"-0.00092"	"6/102"	"6"	"102"	"174671.31439209"	"HCD"	"MS2"	"29.31054"	"12.4"	"100.000"	"76.7268"	"26200"	"26200"	"26176"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"14.8"	""	"18.1"	""	"13.5"	""	"27.0"	"25.2"	""	"948"	"11"	"36.000"	"29.000"	"3.74781669671917"	"15"	"0.00307"	"0.0337"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40216"	"1507.79704"	"1507.79876"	"-1.14"	"-0.00086"	"7/102"	"7"	"102"	"303854.380981445"	"HCD"	"MS2"	"59.31468"	"27.8"	"100.000"	"70.9945"	"23874"	"23874"	"23852"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.5"	""	"30.9"	""	"31.8"	""	"43.0"	""	"64.2"	"57.0"	""	"948"	"11"	"36.000"	"29.000"	"3.60394655269646"	"13"	"0.004234"	"0.04886"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"754.40216"	"1507.79704"	"1507.79876"	"-1.14"	"-0.00086"	"9/102"	"9"	"102"	"2156750.7432251"	"HCD"	"MS2"	"0"	"81.8"	"100.000"	"57.6773"	"18470"	"18470"	"18450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.2"	""	"95.5"	""	"107.6"	""	"225.8"	""	"144.3"	"139.2"	""	"948"	"49"	"36.000"	"29.000"	"0.000576472164306379"	"22"	"0"	"1.391E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40228"	"1507.79729"	"1507.79876"	"-0.98"	"-0.00074"	"10/102"	"10"	"102"	"202773.273010254"	"HCD"	"MS2"	"24.10638"	"14.4"	"100.000"	"73.4359"	"24862"	"24862"	"24835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"23.6"	""	"22.1"	""	"21.7"	""	"25.4"	"30.1"	""	"942"	"17"	"36.000"	"29.000"	"0.847268201025659"	"14"	"0.002588"	"0.02682"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"754.40240"	"1507.79753"	"1507.79876"	"-0.81"	"-0.00061"	"9/102"	"9"	"102"	"1565445.75164795"	"HCD"	"MS2"	"0"	"66.7"	"100.000"	"57.9760"	"18592"	"18592"	"18574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.0"	""	"80.9"	""	"89.2"	""	"182.4"	"0.6"	"115.6"	"110.4"	""	"937"	"53"	"36.000"	"29.000"	"0.000234806218954377"	"23"	"0"	"8.485E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"754.40265"	"1507.79802"	"1507.79876"	"-0.49"	"-0.00037"	"9/102"	"9"	"102"	"1233641.16821289"	"HCD"	"MS2"	"0"	"53.0"	"100.000"	"58.3033"	"18690"	"18690"	"18670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.2"	""	"68.2"	""	"67.5"	""	"132.0"	""	"98.8"	"93.6"	""	"941"	"51"	"36.000"	"29.000"	"0.000385087682817419"	"23"	"0.0001991"	"0.003284"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"754.40271"	"1507.79814"	"1507.79876"	"-0.41"	"-0.00031"	"6/102"	"6"	"102"	"244898.922607422"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"72.8296"	"24615"	"24615"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	""	"27.0"	""	"21.5"	""	"35.2"	""	"43.6"	"32.8"	""	"941"	"16"	"36.000"	"29.000"	"1.14963407504251"	"17"	"0.009084"	"0.1169"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"754.40283"	"1507.79839"	"1507.79876"	"-0.25"	"-0.00019"	"11/102"	"11"	"102"	"2154749.53808594"	"HCD"	"MS2"	"0"	"81.2"	"100.000"	"58.0017"	"18567"	"18567"	"18550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"90.3"	""	"106.1"	""	"238.0"	"0.6"	"138.5"	"130.2"	""	"940"	"46"	"36.000"	"29.000"	"0.00125631301207176"	"22"	"0"	"2.353E-06"	"0.989"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40295"	"1507.79863"	"1507.79876"	"-0.08"	"-0.00006"	"5/102"	"5"	"102"	"140940.988891602"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"65.1478"	"21470"	"21470"	"21441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"17.5"	""	"18.1"	""	"13.0"	""	"21.0"	"20.2"	""	"954"	"24"	"36.000"	"29.000"	"0.171205762825668"	"14"	"0.00329"	"0.03502"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"754.40314"	"1507.79900"	"1507.79876"	"0.16"	"0.00012"	"12/102"	"12"	"102"	"236874.181335449"	"HCD"	"MS2"	"54.85017"	"20.8"	"100.000"	"71.0180"	"23852"	"23852"	"23826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"24.2"	""	"28.2"	""	"26.1"	""	"47.2"	"44.8"	""	"951"	"17"	"36.000"	"29.000"	"0.897739886495288"	"16"	"0.002834"	"0.03038"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40332"	"1507.79936"	"1507.79876"	"0.40"	"0.00030"	"7/102"	"7"	"102"	"218502.199707031"	"HCD"	"MS2"	"35.59916"	"16.7"	"100.000"	"70.3752"	"23591"	"23591"	"23566"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"17.0"	""	"21.7"	""	"29.3"	""	"34.3"	"38.3"	""	"939"	"21"	"36.000"	"29.000"	"0.373796815020931"	"14"	"0.002834"	"0.03014"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"754.40344"	"1507.79961"	"1507.79876"	"0.56"	"0.00042"	"9/102"	"9"	"102"	"173649.956787109"	"HCD"	"MS2"	"39.70658"	"11.9"	"100.000"	"76.5968"	"26116"	"26116"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"18.2"	""	"16.8"	""	"18.7"	""	"22.2"	"19.3"	""	"937"	"9"	"36.000"	"29.000"	"5.28092008218227"	"14"	"0.003529"	"0.03924"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.40375"	"1507.80022"	"1507.79876"	"0.97"	"0.00073"	"5/102"	"5"	"102"	"168540.566650391"	"HCD"	"MS2"	"28.39484"	"13.3"	"100.000"	"76.2866"	"26021"	"26021"	"25998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"17.3"	""	"22.9"	""	"21.1"	""	"21.7"	"25.7"	""	"961"	"18"	"36.000"	"29.000"	"0.6929364264077"	"14"	"0.00307"	"0.03291"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAMDGTEGLVR"	"[R].tIAmDGTEGLVR.[G]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"754.40430"	"1507.80132"	"1507.79876"	"1.70"	"0.00128"	"11/102"	"11"	"102"	"211537.22454834"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"70.6235"	"23725"	"23725"	"23701"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"21.3"	""	"24.1"	""	"26.0"	""	"37.4"	"37.1"	""	"945"	"25"	"36.000"	"29.000"	"0.135332409078086"	"15"	"0.003904"	"0.04261"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"754.41614"	"1507.82500"	"1507.82557"	"-0.38"	"-0.00029"	"7/76"	"7"	"76"	"1172614.5793457"	"HCD"	"MS2"	"0"	"100.5"	"100.000"	"72.0981"	"24318"	"24318"	"24298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.3"	""	"101.4"	""	"110.1"	""	"194.8"	""	"208.4"	"209.0"	""	"1028"	"37"	"37.000"	"30.000"	"0.00988469148659822"	""	"0"	"0.0001537"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDLEEELK"	"[K].sSDLEEELk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"P09495"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3"	"0"	"3"	"3"	"0.1562"	"0.0000"	"1"	"1"	"1"	"503.27991"	"1507.82517"	"1507.82557"	"-0.27"	"-0.00014"	"5/76"	"5"	"76"	"563147.724243164"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"72.1420"	"24336"	"24336"	"24313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"20.2"	""	"33.2"	""	"48.1"	""	"49.7"	"46.7"	""	"1031"	"32"	"37.000"	"30.000"	"0.0361600206335495"	""	"9.9E-05"	"0.0007038"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQDSLLTAFR"	"[R].vEQDSLLTAFR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"754.41827"	"1507.82927"	"1507.83177"	"-1.66"	"-0.00125"	"6/108"	"6"	"108"	"259341.422241211"	"HCD"	"MS2"	"34.68343"	"14.6"	"100.000"	"106.3556"	"38115"	"38115"	"38098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"22.5"	""	"20.7"	""	"23.8"	""	"23.2"	"30.0"	""	"1040"	"22"	"37.000"	"30.000"	"0.304791845547295"	"17"	"0.003317"	"0.03666"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEQDSLLTAFR"	"[R].vEQDSLLTAFR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"Q9ER24"	"Ataxin-10 OS=Rattus norvegicus OX=10116 GN=Atxn10 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"754.41907"	"1507.83086"	"1507.83177"	"-0.61"	"-0.00046"	"6/108"	"6"	"108"	"185793.974914551"	"HCD"	"MS2"	"47.79229"	"10.2"	"100.000"	"106.5807"	"38223"	"38223"	"38209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"8.7"	""	"17.4"	""	"12.8"	""	"22.0"	"20.6"	""	"1020"	"10"	"37.000"	"30.000"	"4.89294322073126"	"19"	"0.004234"	"0.04846"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPEELFTK"	"[K].aDPEELFTk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"754.42328"	"1507.83928"	"1507.84083"	"-1.03"	"-0.00078"	"11/76"	"11"	"76"	"983634.852661133"	"HCD"	"MS2"	"30.22942"	"69.0"	"100.000"	"99.8087"	"35514"	"35514"	"35495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.1"	""	"79.6"	""	"88.2"	""	"135.3"	""	"127.3"	"130.1"	""	"1031"	"31"	"37.000"	"30.000"	"0.0447949101297089"	"20"	"0.002588"	"0.02638"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPEELFTK"	"[K].aDPEELFTk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"754.42365"	"1507.84001"	"1507.84083"	"-0.54"	"-0.00041"	"12/76"	"12"	"76"	"487945.041992188"	"HCD"	"MS2"	"20.15217"	"37.6"	"100.000"	"99.9803"	"35557"	"35557"	"35540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.2"	""	"36.5"	""	"55.8"	""	"64.7"	""	"70.9"	"82.3"	""	"1038"	"37"	"37.000"	"30.000"	"0.0105722483832927"	"20"	"0.001261"	"0.00982"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPEELFTK"	"[K].aDPEELFTk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"754.42377"	"1507.84026"	"1507.84083"	"-0.38"	"-0.00029"	"11/76"	"11"	"76"	"320386.015319824"	"HCD"	"MS2"	"20.94831"	"26.3"	"100.000"	"100.1059"	"35635"	"35635"	"35618"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"31.7"	""	"35.1"	""	"46.5"	""	"50.9"	"60.1"	""	"1031"	"31"	"37.000"	"30.000"	"0.0398316841616834"	"19"	"0.0009352"	"0.008199"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPEELFTK"	"[K].aDPEELFTk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"503.28497"	"1507.84037"	"1507.84083"	"-0.31"	"-0.00015"	"5/76"	"5"	"76"	"484720.602539063"	"HCD"	"MS2"	"70.35132"	"18.1"	"100.000"	"99.8533"	"35505"	"35505"	"35476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"20.8"	""	"22.5"	""	"33.7"	""	"36.0"	"35.8"	""	"1031"	"25"	"37.000"	"30.000"	"0.170305498404478"	"16"	"0.0001991"	"0.004381"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPEELFTK"	"[K].aDPEELFTk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"B0LT89"	"Serine/threonine-protein kinase 24 OS=Rattus norvegicus OX=10116 GN=Stk24 PE=2 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"754.42395"	"1507.84062"	"1507.84083"	"-0.14"	"-0.00010"	"8/76"	"8"	"76"	"715806.942199707"	"HCD"	"MS2"	"48.11523"	"45.1"	"100.000"	"99.6786"	"35433"	"35433"	"35413"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.9"	""	"55.8"	""	"52.3"	""	"82.5"	""	"86.0"	"84.8"	""	"1036"	"27"	"37.000"	"30.000"	"0.0998457905032906"	"17"	"9.9E-05"	"0.0008062"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEEAVAAGAK"	"[K].gFEEAVAAGAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"0"	"3"	"3"	"0.5806"	"0.0000"	"1"	"1"	"1"	"503.28827"	"1507.85025"	"1507.85206"	"-1.20"	"-0.00060"	"9/82"	"9"	"82"	"845198.492858887"	"HCD"	"MS2"	"14.00711"	"30.9"	"100.000"	"72.9692"	"24642"	"24642"	"24618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"35.8"	""	"42.9"	""	"48.1"	"0.4"	"59.5"	"62.5"	""	"977"	"31"	"36.000"	"29.000"	"0.0368014192883921"	"27"	"0"	"0.0002432"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEEAVAAGAK"	"[K].gFEEAVAAGAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"503.28842"	"1507.85071"	"1507.85206"	"-0.90"	"-0.00045"	"9/82"	"9"	"82"	"751103.160095215"	"HCD"	"MS2"	"30.01634"	"30.8"	"100.000"	"73.0557"	"24707"	"24707"	"24680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.0"	""	"43.4"	""	"44.8"	""	"54.1"	""	"61.3"	"55.9"	""	"955"	"22"	"36.000"	"29.000"	"0.33340597294685"	"21"	"0"	"0.0002431"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"754.42902"	"1507.85076"	"1507.85206"	"-0.87"	"-0.00065"	"8/90"	"8"	"90"	"806325.061462402"	"HCD"	"MS2"	"5.224511"	"70.8"	"100.000"	"91.9530"	"32345"	"32345"	"32326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.6"	""	"77.2"	""	"66.5"	""	"137.4"	""	"151.6"	"139.6"	""	"955"	"54"	"36.000"	"29.000"	"0.000175781584914309"	"25"	"0"	"6.688E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEEAVAAGAK"	"[K].gFEEAVAAGAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"754.42908"	"1507.85088"	"1507.85206"	"-0.79"	"-0.00059"	"8/82"	"8"	"82"	"433858.579284668"	"HCD"	"MS2"	"27.25989"	"35.7"	"100.000"	"73.0039"	"24656"	"24656"	"24634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.4"	""	"50.7"	""	"51.8"	""	"54.0"	"1.4"	"66.0"	"63.8"	""	"955"	"49"	"36.000"	"29.000"	"0.000650089835877492"	"22"	"0"	"3.877E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"754.42926"	"1507.85124"	"1507.85206"	"-0.54"	"-0.00041"	"11/90"	"11"	"90"	"347397.919250488"	"HCD"	"MS2"	"72.10448"	"21.9"	"100.000"	"86.8459"	"30253"	"30253"	"30234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"24.5"	""	"19.5"	""	"44.8"	""	"42.6"	"46.8"	""	"955"	"14"	"36.000"	"29.000"	"1.83642575926656"	"14"	"0.007104"	"0.09089"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.2917"	"0.0000"	"1"	"1"	"1"	"754.42932"	"1507.85137"	"1507.85206"	"-0.46"	"-0.00035"	"9/90"	"9"	"90"	"1040774.72595215"	"HCD"	"MS2"	"0"	"95.0"	"100.000"	"92.2972"	"32450"	"32450"	"32436"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.3"	""	"100.9"	""	"96.0"	""	"170.3"	""	"210.6"	"191.7"	""	"952"	"48"	"36.000"	"29.000"	"0.000810227449995997"	"24"	"0"	"2.27E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.2778"	"0.0000"	"1"	"1"	"1"	"754.42950"	"1507.85173"	"1507.85206"	"-0.22"	"-0.00017"	"9/90"	"9"	"90"	"634916.600158691"	"HCD"	"MS2"	"0"	"57.3"	"100.000"	"92.2597"	"32469"	"32469"	"32453"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.1"	""	"74.0"	""	"59.4"	""	"103.6"	""	"111.1"	"115.0"	""	"953"	"54"	"36.000"	"29.000"	"0.000200476238425188"	"26"	"0"	"1.124E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.0714"	"0.0000"	"1"	"1"	"1"	"754.42963"	"1507.85198"	"1507.85206"	"-0.06"	"-0.00004"	"8/90"	"8"	"90"	"735548.748901367"	"HCD"	"MS2"	"7.832094"	"64.5"	"100.000"	"92.0207"	"32337"	"32337"	"32318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.3"	""	"74.6"	""	"65.2"	""	"126.7"	""	"127.1"	"119.3"	""	"956"	"42"	"36.000"	"29.000"	"0.00271286321385286"	"21"	"0"	"1.009E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.2703"	"0.0000"	"1"	"1"	"1"	"754.42993"	"1507.85259"	"1507.85206"	"0.35"	"0.00026"	"7/90"	"7"	"90"	"300998.834533691"	"HCD"	"MS2"	"21.19407"	"26.8"	"100.000"	"86.8938"	"30306"	"30306"	"30288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.4"	""	"23.3"	""	"25.8"	""	"57.6"	"0.2"	"58.5"	"54.2"	""	"947"	"37"	"36.000"	"29.000"	"0.00938253046718713"	"22"	"0"	"0.0002793"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFEEAVAAGAK"	"[K].gFEEAVAAGAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"P97519"	"Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1"	"0"	"2"	"2"	"0.8514"	"0.0000"	"1"	"1"	"1"	"754.42993"	"1507.85259"	"1507.85206"	"0.35"	"0.00026"	"10/82"	"10"	"82"	"406740.089782715"	"HCD"	"MS2"	"45.22335"	"31.2"	"100.000"	"73.1664"	"24752"	"24752"	"24728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"48.0"	""	"46.2"	""	"48.9"	"0.6"	"56.4"	"55.0"	""	"947"	"74"	"36.000"	"29.000"	"1.83366494870385E-06"	"28"	"0"	"3.185E-08"	"1.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGqDLGVAFk.[I]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"503.28915"	"1507.85291"	"1507.85206"	"0.56"	"0.00028"	"8/90"	"8"	"90"	"389840.730834961"	"HCD"	"MS2"	"38.80284"	"16.7"	"100.000"	"86.9846"	"30308"	"30308"	"30291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"15.3"	""	"17.5"	""	"36.9"	""	"31.3"	"35.2"	""	"926"	"19"	"36.000"	"29.000"	"0.628899125769852"	"19"	"0.001453"	"0.01158"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGQDLGVAFK"	"[K].nGQDLGVAFk.[I]"	"N-Term(TMT6plex); N1(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"2"	"2"	"503.28915"	"1507.85291"	"1507.85206"	"0.56"	"0.00028"	"8/90"	"8"	"90"	"389840.730834961"	"HCD"	"MS2"	"38.80284"	"16.7"	"100.000"	"86.9846"	"30308"	"30308"	"30291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"15.3"	""	"17.5"	""	"36.9"	""	"31.3"	"35.2"	""	"926"	"19"	"36.000"	"29.000"	"0.628899125769852"	"19"	"0.0001686"	"0.001574"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDIPLDK"	"[R].ySVDIPLDk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"503.29651"	"1507.87497"	"1507.87722"	"-1.49"	"-0.00075"	"9/76"	"9"	"76"	"518557.835571289"	"HCD"	"MS2"	"41.7742"	"21.4"	"100.000"	"101.8924"	"36332"	"36332"	"36308"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"25.9"	""	"31.7"	""	"37.1"	""	"42.0"	"43.5"	""	"786"	"26"	"35.000"	"28.000"	"0.106756063265376"	"16"	"0.0001686"	"0.001423"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDIPLDK"	"[R].ySVDIPLDk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"754.44177"	"1507.87627"	"1507.87722"	"-0.63"	"-0.00047"	"8/76"	"8"	"76"	"176017.462768555"	"HCD"	"MS2"	"32.14131"	"14.1"	"100.000"	"102.2735"	"36510"	"36510"	"36491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"18.0"	""	"16.9"	""	"20.4"	""	"30.0"	"32.0"	""	"782"	"18"	"35.000"	"28.000"	"0.556130555765023"	"19"	"0.007717"	"0.09842"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDIPLDK"	"[R].ySVDIPLDk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"754.44299"	"1507.87871"	"1507.87722"	"0.99"	"0.00075"	"8/76"	"8"	"76"	"746249.464660645"	"HCD"	"MS2"	"25.64833"	"49.8"	"100.000"	"101.8118"	"36299"	"36299"	"36278"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.5"	""	"64.1"	""	"60.7"	""	"80.2"	""	"108.0"	"93.6"	""	"756"	"37"	"35.000"	"28.000"	"0.00786125347725197"	"15"	"0"	"0.0001078"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDIPLDK"	"[R].ySVDIPLDk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"P61354"	"60S ribosomal protein L27 OS=Rattus norvegicus OX=10116 GN=Rpl27 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.44360"	"1507.87993"	"1507.87722"	"1.80"	"0.00136"	"7/76"	"7"	"76"	"524358.896728516"	"HCD"	"MS2"	"37.53772"	"33.0"	"100.000"	"101.9667"	"36386"	"36386"	"36366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"43.6"	""	"50.7"	""	"50.3"	""	"67.6"	"57.7"	""	"750"	"27"	"35.000"	"28.000"	"0.0741363615041948"	"14"	"0.0001991"	"0.003367"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVDLTMDDIR"	"[K].wVDLTmDDIR.[R]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"754.88416"	"1508.76103"	"1508.76165"	"-0.41"	"-0.00031"	"6/82"	"6"	"82"	"149277.641723633"	"HCD"	"MS2"	"26.85003"	"7.2"	"100.000"	"104.7854"	"37512"	"37512"	"37497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"7.5"	""	"10.7"	""	"16.1"	""	"13.4"	"12.1"	""	"769"	"24"	"35.000"	"28.000"	"0.153425074958244"	"15"	"0.0001991"	"0.003161"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WVDLTMDDIR"	"[K].wVDLTmDDIR.[R]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"P16446"	"Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus OX=10116 GN=Pitpna PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"754.88422"	"1508.76116"	"1508.76165"	"-0.32"	"-0.00024"	"5/82"	"5"	"82"	"161478.158203125"	"HCD"	"MS2"	"29.82645"	"8.1"	"100.000"	"104.5501"	"37399"	"37399"	"37379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.5"	""	"7.7"	""	"7.5"	""	"22.3"	""	"16.1"	"15.0"	""	"769"	"17"	"35.000"	"28.000"	"0.82774457700152"	"18"	"0.004852"	"0.06025"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88544"	"1508.76360"	"1508.76733"	"-2.48"	"-0.00187"	"5/64"	"5"	"64"	"527865.444580078"	"HCD"	"MS2"	"23.5805"	"57.0"	"100.000"	"87.0577"	"30372"	"30372"	"30350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.9"	""	"48.2"	""	"44.5"	""	"127.8"	""	"139.5"	"118.3"	""	"765"	"22"	"35.000"	"28.000"	"0.270789262526933"	"17"	"0.001951"	"0.01724"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88544"	"1508.76360"	"1508.76733"	"-2.48"	"-0.00187"	"5/68"	"5"	"68"	"527865.444580078"	"HCD"	"MS2"	"23.5805"	"57.0"	"100.000"	"87.0577"	"30372"	"30372"	"30350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.9"	""	"48.2"	""	"44.5"	""	"127.8"	""	"139.5"	"118.3"	""	"765"	"22"	"35.000"	"28.000"	"0.270789262526933"	"17"	"0.001951"	"0.01724"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88586"	"1508.76445"	"1508.76733"	"-1.91"	"-0.00144"	"5/64"	"5"	"64"	"271282.639709473"	"HCD"	"MS2"	"19.81239"	"26.0"	"100.000"	"88.0226"	"30725"	"30725"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"27.7"	""	"20.8"	""	"54.0"	""	"51.6"	"62.9"	""	"764"	"17"	"35.000"	"28.000"	"0.790793995238179"	"14"	"0.002166"	"0.0197"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88586"	"1508.76445"	"1508.76733"	"-1.91"	"-0.00144"	"5/68"	"5"	"68"	"271282.639709473"	"HCD"	"MS2"	"19.81239"	"26.0"	"100.000"	"88.0226"	"30725"	"30725"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"27.7"	""	"20.8"	""	"54.0"	""	"51.6"	"62.9"	""	"764"	"17"	"35.000"	"28.000"	"0.790793995238179"	"14"	"0.002166"	"0.0197"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88623"	"1508.76518"	"1508.76733"	"-1.42"	"-0.00107"	"6/64"	"6"	"64"	"719797.362792969"	"HCD"	"MS2"	"22.50092"	"75.0"	"100.000"	"87.1300"	"30367"	"30367"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.9"	""	"51.5"	""	"56.7"	""	"160.8"	"1.1"	"164.4"	"171.8"	""	"771"	"41"	"35.000"	"28.000"	"0.00274804843113773"	"18"	"0"	"0.0003511"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88623"	"1508.76518"	"1508.76733"	"-1.42"	"-0.00107"	"6/68"	"6"	"68"	"719797.362792969"	"HCD"	"MS2"	"22.50092"	"75.0"	"100.000"	"87.1300"	"30367"	"30367"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.9"	""	"51.5"	""	"56.7"	""	"160.8"	"1.1"	"164.4"	"171.8"	""	"771"	"41"	"35.000"	"28.000"	"0.00274804843113773"	"18"	"0"	"0.0003511"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"503.59357"	"1508.76615"	"1508.76733"	"-0.78"	"-0.00039"	"8/64"	"8"	"64"	"360987.803527832"	"HCD"	"MS2"	"43.28638"	"17.0"	"100.000"	"87.8564"	"30659"	"30659"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"21.8"	""	"19.8"	""	"33.8"	""	"32.7"	"35.9"	""	"790"	"26"	"35.000"	"28.000"	"0.104615755474965"	"14"	"0.001999"	"0.01748"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"503.59357"	"1508.76615"	"1508.76733"	"-0.79"	"-0.00039"	"8/68"	"8"	"68"	"360987.803527832"	"HCD"	"MS2"	"43.28638"	"17.0"	"100.000"	"87.8564"	"30659"	"30659"	"30643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"21.8"	""	"19.8"	""	"33.8"	""	"32.7"	"35.9"	""	"790"	"26"	"35.000"	"28.000"	"0.104615755474965"	"14"	"0.001999"	"0.01748"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88672"	"1508.76616"	"1508.76733"	"-0.78"	"-0.00059"	"6/64"	"6"	"64"	"1157187.76898193"	"HCD"	"MS2"	"2.720892"	"116.3"	"100.000"	"87.6803"	"30623"	"30623"	"30609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.1"	""	"82.0"	""	"82.3"	""	"255.0"	""	"283.0"	"274.8"	""	"790"	"42"	"35.000"	"28.000"	"0.00234745402653151"	"18"	"9.9E-05"	"0.0006814"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88672"	"1508.76616"	"1508.76733"	"-0.78"	"-0.00059"	"6/68"	"6"	"68"	"1157187.76898193"	"HCD"	"MS2"	"2.720892"	"116.3"	"100.000"	"87.6803"	"30623"	"30623"	"30609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.1"	""	"82.0"	""	"82.3"	""	"255.0"	""	"283.0"	"274.8"	""	"790"	"42"	"35.000"	"28.000"	"0.00234745402653151"	"18"	"9.9E-05"	"0.0006815"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88684"	"1508.76641"	"1508.76733"	"-0.61"	"-0.00046"	"6/64"	"6"	"64"	"1533503.81420898"	"HCD"	"MS2"	"1.436305"	"152.7"	"100.000"	"87.7228"	"30605"	"30605"	"30588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.6"	""	"115.6"	""	"89.1"	""	"319.1"	""	"373.8"	"390.7"	""	"797"	"42"	"36.000"	"29.000"	"0.0023628074184513"	"17"	"0.0001686"	"0.001145"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88684"	"1508.76641"	"1508.76733"	"-0.61"	"-0.00046"	"6/68"	"6"	"68"	"1533503.81420898"	"HCD"	"MS2"	"1.436305"	"152.7"	"100.000"	"87.7228"	"30605"	"30605"	"30588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.6"	""	"115.6"	""	"89.1"	""	"319.1"	""	"373.8"	"390.7"	""	"797"	"42"	"36.000"	"29.000"	"0.0023628074184513"	"17"	"0.0001686"	"0.001145"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"503.59369"	"1508.76651"	"1508.76733"	"-0.54"	"-0.00027"	"8/64"	"8"	"64"	"432118.949645996"	"HCD"	"MS2"	"48.63762"	"20.9"	"100.000"	"87.7656"	"30658"	"30658"	"30635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"18.0"	""	"29.2"	""	"38.7"	""	"41.4"	"48.3"	""	"797"	"20"	"36.000"	"29.000"	"0.4409895779151"	"14"	"0.0007633"	"0.007351"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"503.59369"	"1508.76651"	"1508.76733"	"-0.54"	"-0.00027"	"8/68"	"8"	"68"	"432118.949645996"	"HCD"	"MS2"	"48.63762"	"20.9"	"100.000"	"87.7656"	"30658"	"30658"	"30635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"18.0"	""	"29.2"	""	"38.7"	""	"41.4"	"48.3"	""	"797"	"20"	"36.000"	"29.000"	"0.4409895779151"	"14"	"0.0007633"	"0.007351"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88715"	"1508.76702"	"1508.76733"	"-0.21"	"-0.00016"	"6/64"	"6"	"64"	"4207304.59112549"	"HCD"	"MS2"	"0"	"396.9"	"100.000"	"87.3716"	"30499"	"30499"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"470.6"	""	"287.2"	""	"271.4"	""	"871.2"	"1.4"	"955.5"	"923.8"	""	"798"	"37"	"36.000"	"29.000"	"0.00866907770366634"	"18"	"0.0001686"	"0.001964"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88715"	"1508.76702"	"1508.76733"	"-0.21"	"-0.00016"	"6/68"	"6"	"68"	"4207304.59112549"	"HCD"	"MS2"	"0"	"396.9"	"100.000"	"87.3716"	"30499"	"30499"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"470.6"	""	"287.2"	""	"271.4"	""	"871.2"	"1.4"	"955.5"	"923.8"	""	"798"	"37"	"36.000"	"29.000"	"0.00866907770366634"	"18"	"0.0001686"	"0.001964"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"503.59387"	"1508.76706"	"1508.76733"	"-0.18"	"-0.00009"	"8/64"	"8"	"64"	"715470.609741211"	"HCD"	"MS2"	"47.60254"	"28.4"	"100.000"	"87.1338"	"30403"	"30403"	"30381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"19.2"	""	"25.6"	""	"56.5"	""	"75.0"	"60.2"	""	"798"	"22"	"36.000"	"29.000"	"0.281172534517892"	"14"	"0.002189"	"0.02013"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"503.59387"	"1508.76706"	"1508.76733"	"-0.18"	"-0.00009"	"8/68"	"8"	"68"	"715470.609741211"	"HCD"	"MS2"	"47.60254"	"28.4"	"100.000"	"87.1338"	"30403"	"30403"	"30381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"19.2"	""	"25.6"	""	"56.5"	""	"75.0"	"60.2"	""	"798"	"22"	"36.000"	"29.000"	"0.281172534517892"	"14"	"0.002189"	"0.02014"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"503.59387"	"1508.76706"	"1508.76733"	"-0.18"	"-0.00009"	"8/64"	"8"	"64"	"2045925.0993042"	"HCD"	"MS2"	"5.427399"	"68.0"	"100.000"	"87.4876"	"30510"	"30510"	"30497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.8"	""	"53.1"	""	"51.7"	""	"151.6"	""	"151.2"	"170.0"	""	"798"	"21"	"36.000"	"29.000"	"0.311869494030744"	"14"	"0.0003294"	"0.006174"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"503.59387"	"1508.76706"	"1508.76733"	"-0.18"	"-0.00009"	"8/68"	"8"	"68"	"2045925.0993042"	"HCD"	"MS2"	"5.427399"	"68.0"	"100.000"	"87.4876"	"30510"	"30510"	"30497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.8"	""	"53.1"	""	"51.7"	""	"151.6"	""	"151.2"	"170.0"	""	"798"	"21"	"36.000"	"29.000"	"0.311869494030744"	"14"	"0.0003294"	"0.006175"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"503.59393"	"1508.76725"	"1508.76733"	"-0.06"	"-0.00003"	"8/64"	"8"	"64"	"1994533.54675293"	"HCD"	"MS2"	"7.809076"	"69.5"	"100.000"	"87.4543"	"30532"	"30532"	"30514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"57.5"	""	"39.2"	""	"151.7"	""	"172.6"	"173.4"	""	"798"	"18"	"36.000"	"29.000"	"0.70302844251824"	"14"	"0.001488"	"0.01252"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"503.59393"	"1508.76725"	"1508.76733"	"-0.06"	"-0.00003"	"8/68"	"8"	"68"	"1994533.54675293"	"HCD"	"MS2"	"7.809076"	"69.5"	"100.000"	"87.4543"	"30532"	"30532"	"30514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"57.5"	""	"39.2"	""	"151.7"	""	"172.6"	"173.4"	""	"798"	"18"	"36.000"	"29.000"	"0.70302844251824"	"14"	"0.001488"	"0.01252"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"754.88733"	"1508.76738"	"1508.76733"	"0.03"	"0.00002"	"6/64"	"6"	"64"	"3893340.77972412"	"HCD"	"MS2"	"0"	"381.8"	"100.000"	"87.4185"	"30483"	"30483"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"463.6"	""	"262.5"	""	"224.8"	""	"847.4"	""	"919.5"	"922.8"	""	"796"	"40"	"35.000"	"29.000"	"0.00435394633776293"	"18"	"0.0001686"	"0.001849"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"754.88733"	"1508.76738"	"1508.76733"	"0.03"	"0.00002"	"6/68"	"6"	"68"	"3893340.77972412"	"HCD"	"MS2"	"0"	"381.8"	"100.000"	"87.4185"	"30483"	"30483"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"463.6"	""	"262.5"	""	"224.8"	""	"847.4"	""	"919.5"	"922.8"	""	"796"	"40"	"35.000"	"29.000"	"0.00435394633776293"	"18"	"0.0001686"	"0.001849"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DYFEEYGK"	"[R].dYFEEYGk.[I]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"503.59402"	"1508.76752"	"1508.76733"	"0.13"	"0.00006"	"8/64"	"8"	"64"	"735886.591369629"	"HCD"	"MS2"	"35.40755"	"29.1"	"100.000"	"87.1993"	"30395"	"30395"	"30376"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"28.8"	""	"25.3"	""	"69.2"	""	"58.5"	"63.3"	""	"784"	"22"	"35.000"	"28.000"	"0.277514747478582"	"17"	"0.001348"	"0.01079"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DYFEQYGK"	"[R].dYFEqYGk.[I]"	"N-Term(TMT6plex); Q5(Deamidated); K8(TMT6plex)"	"1"	"1"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"P04256"	"Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"503.59402"	"1508.76752"	"1508.76733"	"0.12"	"0.00006"	"8/68"	"8"	"68"	"735886.591369629"	"HCD"	"MS2"	"35.40755"	"29.1"	"100.000"	"87.1993"	"30395"	"30395"	"30376"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"28.8"	""	"25.3"	""	"69.2"	""	"58.5"	"63.3"	""	"784"	"22"	"35.000"	"28.000"	"0.277514747478582"	"17"	"0.001348"	"0.01079"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTYVVLDEADR"	"[R].vTYVVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"754.91071"	"1508.81413"	"1508.81579"	"-1.10"	"-0.00083"	"6/96"	"6"	"96"	"170787.630493164"	"HCD"	"MS2"	"24.22154"	"16.2"	"100.000"	"92.6176"	"32580"	"32580"	"32552"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.4"	""	"13.1"	""	"19.1"	""	"29.8"	""	"29.0"	"36.6"	""	"995"	"19"	"36.000"	"29.000"	"0.57915269963172"	"16"	"0.0001991"	"0.00468"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTYVVLDEADR"	"[R].vTYVVLDEADR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"Q62780"	"Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"754.91113"	"1508.81499"	"1508.81579"	"-0.53"	"-0.00040"	"5/96"	"5"	"96"	"186262.826293945"	"HCD"	"MS2"	"37.29091"	"17.1"	"100.000"	"92.5449"	"32586"	"32586"	"32561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"19.2"	""	"17.9"	""	"26.2"	""	"39.0"	"41.5"	""	"980"	"12"	"36.000"	"29.000"	"2.83267063228802"	"13"	"0.003704"	"0.04016"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MESALDQLK"	"[R].mESALDQLk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"503.61755"	"1508.83811"	"1508.83945"	"-0.89"	"-0.00045"	"7/76"	"7"	"76"	"1103409.41616821"	"HCD"	"MS2"	"41.40274"	"42.3"	"100.000"	"69.0890"	"23102"	"23102"	"23077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.3"	""	"52.6"	""	"62.0"	""	"78.7"	"2.6"	"81.6"	"68.9"	""	"934"	"44"	"36.000"	"29.000"	"0.00180018393029916"	"23"	"9.9E-05"	"0.0009419"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MESALDQLK"	"[R].mESALDQLk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"503.61771"	"1508.83857"	"1508.83945"	"-0.59"	"-0.00030"	"7/76"	"7"	"76"	"1150116.96655273"	"HCD"	"MS2"	"43.00058"	"38.6"	"100.000"	"69.0277"	"23043"	"23043"	"23016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.8"	""	"48.2"	""	"57.6"	""	"78.5"	"0.1"	"66.8"	"63.3"	""	"934"	"50"	"36.000"	"29.000"	"0.00045532016081402"	"25"	"0.0001686"	"0.001557"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MESALDQLK"	"[R].mESALDQLk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"754.92297"	"1508.83867"	"1508.83945"	"-0.52"	"-0.00039"	"8/76"	"8"	"76"	"1079922.05316162"	"HCD"	"MS2"	"7.293612"	"76.4"	"100.000"	"69.1543"	"23094"	"23094"	"23076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.1"	""	"81.9"	""	"101.0"	""	"162.7"	""	"135.1"	"134.6"	""	"934"	"35"	"36.000"	"29.000"	"0.0136557916045284"	"24"	"0.002035"	"0.01766"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MESALDQLK"	"[R].mESALDQLk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.6176"	"0.0000"	"1"	"1"	"1"	"754.92346"	"1508.83965"	"1508.83945"	"0.13"	"0.00010"	"8/76"	"8"	"76"	"982616.504699707"	"HCD"	"MS2"	"7.832896"	"69.9"	"100.000"	"69.1788"	"23138"	"23138"	"23120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.0"	""	"74.9"	""	"98.1"	""	"141.6"	"0.5"	"124.3"	"114.0"	""	"951"	"34"	"36.000"	"29.000"	"0.0182873392362566"	"28"	"0.002711"	"0.02845"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MESALDQLK"	"[R].mESALDQLk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"503.61810"	"1508.83976"	"1508.83945"	"0.20"	"0.00010"	"7/76"	"7"	"76"	"715176.733520508"	"HCD"	"MS2"	"20.57905"	"26.5"	"100.000"	"69.5219"	"23278"	"23278"	"23259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.1"	""	"29.7"	""	"32.9"	""	"54.0"	"2.6"	"55.5"	"44.2"	""	"951"	"40"	"36.000"	"29.000"	"0.00495621937676516"	"21"	"0.0001686"	"0.001664"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MESALDQLK"	"[R].mESALDQLk.[Q]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"503.61847"	"1508.84085"	"1508.83945"	"0.93"	"0.00047"	"7/76"	"7"	"76"	"1136579.10681152"	"HCD"	"MS2"	"16.01814"	"39.2"	"100.000"	"69.3546"	"23176"	"23176"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	"1.8"	"37.3"	""	"48.5"	""	"78.7"	"1.8"	"81.5"	"65.0"	""	"974"	"43"	"36.000"	"29.000"	"0.0024918905390813"	"24"	"0.0001686"	"0.001743"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELYDAGVKR"	"[R].eLYDAGVkR.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"503.63226"	"1508.88224"	"1508.88370"	"-0.97"	"-0.00049"	"6/72"	"6"	"72"	"3434610.59802246"	"HCD"	"MS2"	"18.78773"	"180.3"	"100.000"	"45.5410"	"13512"	"13512"	"13494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"427.3"	""	"331.1"	""	"307.1"	""	"192.3"	""	"204.9"	"234.2"	""	"748"	"18"	"35.000"	"28.000"	"0.567376837429792"	"17"	"0.0001991"	"0.004358"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIGCTPGSGK"	"[K].aDIGcTPGSGk.[N]"	"N-Term(TMT6plex); C5(Methylthio); K11(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"755.39240"	"1509.77751"	"1509.78056"	"-2.02"	"-0.00152"	"8/94"	"8"	"94"	"218524.631835938"	"HCD"	"MS2"	"24.9673"	"22.0"	"100.000"	"64.6180"	"21288"	"21288"	"21259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"31.7"	""	"27.3"	""	"35.1"	""	"35.6"	"43.7"	""	"913"	"8"	"36.000"	"29.000"	"7.52386131731394"	"16"	"0.004234"	"0.04983"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSGPYQPLSR"	"[R].eFSGPYQPLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUD2"	"Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2"	"Q9WUD2"	"Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"755.39612"	"1509.78496"	"1509.78991"	"-3.28"	"-0.00247"	"6/106"	"6"	"106"	"175557.268554688"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"73.5617"	"24884"	"24884"	"24858"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"16.6"	""	"18.3"	""	"17.0"	""	"24.2"	"23.6"	""	"942"	"15"	"36.000"	"29.000"	"1.58862322378327"	"14"	"0.002628"	"0.02773"	"0.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSGPYQPLSR"	"[R].eFSGPYQPLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUD2"	"Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2"	"Q9WUD2"	"Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"755.39880"	"1509.79033"	"1509.78991"	"0.28"	"0.00021"	"6/106"	"6"	"106"	"241637.482910156"	"HCD"	"MS2"	"12.4136"	"16.5"	"100.000"	"73.7839"	"25004"	"25004"	"24976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"24.9"	""	"23.6"	""	"22.9"	""	"31.2"	"33.4"	""	"980"	"18"	"36.000"	"29.000"	"0.780182276255074"	"20"	"0.001261"	"0.009556"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFSGPYQPLSR"	"[R].eFSGPYQPLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WUD2"	"Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2"	"Q9WUD2"	"Transient receptor potential cation channel subfamily V member 2 OS=Rattus norvegicus OX=10116 GN=Trpv2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"755.39899"	"1509.79070"	"1509.78991"	"0.52"	"0.00039"	"6/106"	"6"	"106"	"232618.164123535"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"73.8797"	"25013"	"25013"	"24993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.1"	""	"19.2"	""	"25.5"	""	"21.3"	""	"27.6"	"34.8"	""	"954"	"10"	"36.000"	"29.000"	"4.4311696649403"	"18"	"0.007792"	"0.09964"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNADTDGMVK"	"[K].tNADTDGMVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"755.40320"	"1509.79912"	"1509.79831"	"0.53"	"0.00040"	"16/98"	"16"	"98"	"984367.649841309"	"HCD"	"MS2"	"0"	"96.5"	"100.000"	"43.5159"	"12723"	"12723"	"12698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.5"	""	"120.9"	""	"104.0"	""	"116.0"	""	"202.5"	"203.5"	""	"978"	"41"	"36.000"	"29.000"	"0.00381336924045873"	"29"	"0"	"1.838E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNADTDGMVK"	"[K].tNADTDGMVk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"Q6P6R2"	"Dihydrolipoyl dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dld PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"755.40332"	"1509.79936"	"1509.79831"	"0.70"	"0.00052"	"8/98"	"8"	"98"	"924670.293701172"	"HCD"	"MS2"	"0"	"89.0"	"100.000"	"43.6147"	"12729"	"12729"	"12704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.9"	""	"105.3"	""	"100.0"	""	"111.9"	""	"169.2"	"184.0"	""	"976"	"51"	"36.000"	"29.000"	"0.000389421407386773"	"23"	"0"	"3.663E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADIGCTPGSGK"	"[K].aDIGcTPGSGk.[N]"	"N-Term(TMT6plex); C5(Methylthio); K11(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"3"	"503.93835"	"1509.80051"	"1509.78056"	"13.22"	"0.00665"	"11/94"	"11"	"94"	"888077.426940918"	"HCD"	"MS2"	"28.02869"	"30.5"	"100.000"	"64.5008"	"21240"	"21240"	"21211"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"34.2"	""	"36.0"	""	"61.9"	""	"63.3"	"67.2"	""	"988"	"10"	"36.000"	"29.000"	"5.10184134446131"	"14"	"0.008893"	"0.114"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEIGGGTSEVR"	"[K].lYEIGGGTSEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"P12007"	"Isovaleryl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ivd PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"755.40796"	"1509.80864"	"1509.81104"	"-1.59"	"-0.00120"	"11/102"	"11"	"102"	"1032014.06640625"	"HCD"	"MS2"	"0"	"62.2"	"100.000"	"72.2717"	"24388"	"24388"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.7"	""	"90.6"	""	"97.6"	""	"102.0"	""	"115.7"	"121.6"	""	"1019"	"50"	"37.000"	"30.000"	"0.000547197605587865"	"20"	"0"	"7.926E-07"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IINGHLDLDNR"	"[R].iInGHLDLDNR.[G]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"B2GV24"	"E3 UFM1-protein ligase 1 OS=Rattus norvegicus OX=10116 GN=Ufl1 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"503.94489"	"1509.82010"	"1509.82227"	"-1.44"	"-0.00072"	"8/100"	"8"	"100"	"351439.55291748"	"HCD"	"MS2"	"14.26163"	"13.8"	"100.000"	"81.8507"	"28245"	"28245"	"28215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"21.5"	""	"14.7"	""	"22.5"	""	"30.5"	"26.7"	""	"952"	"17"	"36.000"	"29.000"	"0.983120954165812"	"19"	"0.0001991"	"0.004676"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVYDDNNK"	"[R].iAVYDDNNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"755.41809"	"1509.82891"	"1509.83133"	"-1.61"	"-0.00121"	"8/70"	"8"	"70"	"306270.767883301"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"59.2307"	"19069"	"19069"	"19038"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"40.3"	""	"42.1"	""	"36.1"	"1.1"	"47.2"	"55.0"	""	"947"	"39"	"36.000"	"29.000"	"0.00557596428462102"	"19"	"0"	"7.499E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"755.41827"	"1509.82927"	"1509.83133"	"-1.36"	"-0.00103"	"7/88"	"7"	"88"	"1955511.07763672"	"HCD"	"MS2"	"5.751917"	"181.2"	"100.000"	"62.8024"	"20550"	"20550"	"20536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"274.5"	""	"214.7"	""	"247.5"	""	"291.2"	""	"332.1"	"359.6"	""	"944"	"41"	"36.000"	"29.000"	"0.00355583826082315"	"23"	"0"	"0.0001537"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"503.94797"	"1509.82935"	"1509.83133"	"-1.31"	"-0.00066"	"9/88"	"9"	"88"	"2812139.51153564"	"HCD"	"MS2"	"54.27323"	"105.7"	"100.000"	"62.5447"	"20446"	"20446"	"20424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.0"	""	"136.9"	""	"157.5"	""	"179.7"	""	"204.4"	"176.0"	""	"944"	"33"	"36.000"	"29.000"	"0.0261181251549828"	"26"	"9.9E-05"	"0.0008063"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"755.41858"	"1509.82988"	"1509.83133"	"-0.96"	"-0.00072"	"7/88"	"7"	"88"	"1837075.4675293"	"HCD"	"MS2"	"1.845929"	"175.7"	"100.000"	"62.8459"	"20535"	"20535"	"20515"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.8"	""	"203.3"	""	"247.5"	""	"284.7"	""	"328.3"	"359.0"	""	"946"	"41"	"36.000"	"29.000"	"0.00349028700851065"	"25"	"0"	"0.000255"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"755.41895"	"1509.83061"	"1509.83133"	"-0.47"	"-0.00036"	"7/88"	"7"	"88"	"1762791.2543335"	"HCD"	"MS2"	"48.36125"	"160.8"	"100.000"	"62.5055"	"20430"	"20430"	"20408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.4"	""	"211.3"	""	"207.7"	""	"246.6"	"1.1"	"302.8"	"305.3"	""	"924"	"27"	"36.000"	"29.000"	"0.100378794463505"	""	"0"	"0.0003981"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"503.94858"	"1509.83118"	"1509.83133"	"-0.10"	"-0.00005"	"9/88"	"9"	"88"	"3084851.8885498"	"HCD"	"MS2"	"47.38423"	"119.2"	"100.000"	"62.5969"	"20434"	"20434"	"20411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"168.4"	""	"158.5"	""	"167.6"	""	"190.7"	"0.5"	"236.4"	"207.5"	""	"925"	"33"	"36.000"	"29.000"	"0.025183247693962"	"26"	"0.0001686"	"0.001395"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNFEGEITK"	"[R].nNFEGEITk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"755.41931"	"1509.83135"	"1509.83133"	"0.01"	"0.00001"	"7/88"	"7"	"88"	"1950508.40905762"	"HCD"	"MS2"	"41.28725"	"172.3"	"100.000"	"62.5532"	"20416"	"20416"	"20395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"276.6"	""	"217.4"	""	"230.3"	""	"264.6"	""	"323.4"	"321.8"	""	"916"	"29"	"36.000"	"29.000"	"0.0616404042157624"	""	"9.9E-05"	"0.0006297"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAVYDDNNK"	"[R].iAVYDDNNk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"Q9QW07"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 OS=Rattus norvegicus OX=10116 GN=Plcb4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"755.42072"	"1509.83415"	"1509.83133"	"1.87"	"0.00141"	"5/70"	"5"	"70"	"262508.804138184"	"HCD"	"MS2"	"23.21815"	"25.2"	"100.000"	"59.0395"	"19026"	"19026"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.1"	""	"27.6"	""	"36.7"	""	"41.6"	"1.7"	"43.6"	"42.1"	""	"911"	"24"	"36.000"	"29.000"	"0.182594789879237"	"20"	"0.003704"	"0.04017"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"503.96045"	"1509.86679"	"1509.86771"	"-0.61"	"-0.00031"	"12/92"	"12"	"92"	"3015713.51739502"	"HCD"	"MS2"	"26.13523"	"95.3"	"100.000"	"60.2482"	"19516"	"19516"	"19493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.4"	""	"151.7"	""	"145.6"	""	"143.3"	""	"152.3"	"159.9"	""	"698"	"43"	"35.000"	"28.000"	"0.00193119188116292"	"19"	"0"	"6.938E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"755.43726"	"1509.86724"	"1509.86771"	"-0.32"	"-0.00024"	"7/92"	"7"	"92"	"122809.34564209"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"60.7337"	"19713"	"19713"	"19687"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"17.5"	""	"15.7"	""	"15.1"	""	"19.4"	"21.5"	""	"697"	"48"	"35.000"	"28.000"	"0.000528692053059579"	"23"	"0"	"0.0002496"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"755.43750"	"1509.86772"	"1509.86771"	"0.01"	"0.00000"	"10/92"	"10"	"92"	"1177579.8416748"	"HCD"	"MS2"	"0"	"88.9"	"100.000"	"60.4300"	"19589"	"19589"	"19574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"135.6"	""	"143.8"	""	"148.6"	""	"123.2"	""	"132.9"	"157.0"	""	"696"	"94"	"35.000"	"28.000"	"1.38222659215365E-08"	"24"	"0"	"4.466E-08"	"1.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9121"	"0.0000"	"1"	"1"	"1"	"755.43756"	"1509.86785"	"1509.86771"	"0.09"	"0.00007"	"10/92"	"10"	"92"	"401217.79095459"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"60.1031"	"19457"	"19457"	"19429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.7"	""	"57.7"	""	"45.9"	""	"41.6"	""	"48.5"	"53.2"	""	"696"	"91"	"35.000"	"28.000"	"3.05899835857147E-08"	"27"	"0"	"4.307E-08"	"1.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"503.96094"	"1509.86826"	"1509.86771"	"0.36"	"0.00018"	"13/92"	"13"	"92"	"2892756.46124268"	"HCD"	"MS2"	"29.10524"	"88.2"	"100.000"	"60.3405"	"19520"	"19520"	"19496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.7"	""	"137.6"	""	"135.7"	""	"124.1"	"0.2"	"145.7"	"151.9"	""	"699"	"39"	"35.000"	"28.000"	"0.00403131913608471"	"16"	"0"	"5.937E-06"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"755.43787"	"1509.86846"	"1509.86771"	"0.49"	"0.00037"	"18/92"	"18"	"92"	"1102742.35180664"	"HCD"	"MS2"	"0"	"86.9"	"100.000"	"60.5477"	"19604"	"19604"	"19588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.7"	""	"129.8"	""	"151.2"	""	"112.2"	""	"145.1"	"153.9"	""	"699"	"81"	"35.000"	"28.000"	"2.86712864743271E-07"	"23"	"0"	"7.293E-08"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASAYAVGDVK"	"[R].aASAYAVGDVk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"755.43823"	"1509.86919"	"1509.86771"	"0.98"	"0.00074"	"10/92"	"10"	"92"	"606364.141540527"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"60.2622"	"19488"	"19488"	"19464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.3"	""	"74.6"	""	"83.6"	""	"70.1"	"0.1"	"75.9"	"75.0"	""	"688"	"94"	"35.000"	"28.000"	"1.39494936194244E-08"	"24"	"0"	"4.987E-09"	"1.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"755.90015"	"1510.79302"	"1510.79505"	"-1.35"	"-0.00102"	"7/126"	"7"	"126"	"179281.111633301"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"93.4365"	"32905"	"32905"	"32882"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"17.1"	""	"21.0"	""	"17.0"	""	"24.8"	"26.3"	""	"941"	"40"	"36.000"	"29.000"	"0.00453481555615079"	"25"	"0.001999"	"0.01743"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.5435"	"0.0000"	"1"	"1"	"1"	"755.90045"	"1510.79363"	"1510.79505"	"-0.94"	"-0.00071"	"7/126"	"7"	"126"	"161219.793273926"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"93.3274"	"32897"	"32897"	"32875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"19.8"	""	"16.4"	""	"17.8"	""	"24.9"	"21.8"	""	"932"	"46"	"36.000"	"29.000"	"0.00120610721846134"	""	"0.000264"	"0.006055"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].ESNTAGIDIFSk.[F]"	"K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"755.90149"	"1510.79570"	"1510.79505"	"0.43"	"0.00032"	"6/126"	"6"	"126"	"122065.122558594"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"93.6299"	"33019"	"33019"	"32995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"14.0"	""	"11.9"	""	"12.4"	""	"16.1"	"15.7"	""	"941"	"30"	"36.000"	"29.000"	"0.0519468990663926"	"26"	"0.004357"	"0.05126"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"755.90991"	"1510.81255"	"1510.81534"	"-1.85"	"-0.00140"	"8/88"	"8"	"88"	"524794.190551758"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"68.6419"	"22920"	"22920"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.8"	"2.4"	"66.6"	""	"56.6"	""	"99.4"	"1.9"	"81.2"	"86.7"	""	"907"	"55"	"36.000"	"29.000"	"0.00015906597483749"	"23"	"0"	"3.779E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"755.91125"	"1510.81523"	"1510.81534"	"-0.07"	"-0.00006"	"8/88"	"8"	"88"	"1218400.38775635"	"HCD"	"MS2"	"9.356694"	"106.7"	"100.000"	"68.9577"	"23048"	"23048"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.9"	""	"120.5"	""	"130.5"	""	"185.2"	"0.9"	"175.4"	"241.6"	""	"911"	"49"	"36.000"	"29.000"	"0.000584101580399818"	"23"	"0"	"3.735E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"755.91150"	"1510.81572"	"1510.81534"	"0.25"	"0.00019"	"8/88"	"8"	"88"	"1322995.11920166"	"HCD"	"MS2"	"9.55504"	"115.5"	"100.000"	"68.8180"	"22957"	"22957"	"22942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.4"	""	"129.8"	""	"144.9"	""	"202.3"	"1.0"	"195.4"	"240.9"	""	"897"	"51"	"36.000"	"29.000"	"0.000361212230877781"	"24"	"0"	"0.000125"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDAPWQAR"	"[K].eIPVDAPWQAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"504.27823"	"1510.82013"	"1510.82154"	"-0.93"	"-0.00047"	"7/92"	"7"	"92"	"443979.299072266"	"HCD"	"MS2"	"37.53228"	"11.6"	"100.000"	"96.9526"	"34331"	"34331"	"34306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.7"	""	"12.8"	""	"12.1"	""	"20.2"	""	"25.5"	"26.9"	""	"901"	"15"	"36.000"	"29.000"	"1.56925960423723"	"18"	"0.001217"	"0.009415"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDAPWQAR"	"[K].eIPVDAPWQAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"755.91418"	"1510.82109"	"1510.82154"	"-0.30"	"-0.00023"	"7/92"	"7"	"92"	"192781.123718262"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"97.1257"	"34401"	"34401"	"34377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"14.3"	""	"10.4"	""	"16.8"	""	"29.8"	"21.4"	""	"889"	"21"	"36.000"	"29.000"	"0.32724405483641"	"16"	"0.003818"	"0.04136"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDAPWQAR"	"[K].eIPVDAPWQAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"755.91418"	"1510.82109"	"1510.82154"	"-0.30"	"-0.00023"	"5/92"	"5"	"92"	"257559.876464844"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"97.1702"	"34449"	"34449"	"34431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"13.0"	""	"12.6"	""	"21.8"	"0.8"	"30.6"	"34.2"	""	"889"	"22"	"36.000"	"29.000"	"0.295033794793649"	"20"	"0.002462"	"0.02328"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDAPWQAR"	"[K].eIPVDAPWQAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"755.91437"	"1510.82146"	"1510.82154"	"-0.06"	"-0.00004"	"4/92"	"4"	"92"	"328422.025512695"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"96.8720"	"34329"	"34329"	"34310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"18.1"	""	"17.8"	""	"25.1"	""	"31.0"	"34.2"	""	"886"	"22"	"36.000"	"29.000"	"0.28734505406187"	"16"	"0.0001686"	"0.001043"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGNTLEDK"	"[K].eFGNTLEDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"P19939"	"Apolipoprotein C-I OS=Rattus norvegicus OX=10116 GN=Apoc1 PE=3 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"755.91449"	"1510.82170"	"1510.81534"	"4.21"	"0.00318"	"8/88"	"8"	"88"	"393851.596801758"	"HCD"	"MS2"	"22.08402"	"39.7"	"100.000"	"68.5277"	"22841"	"22841"	"22812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.1"	""	"50.7"	""	"52.2"	""	"64.4"	""	"61.6"	"84.1"	""	"918"	"52"	"36.000"	"29.000"	"0.00027657485000813"	"23"	"0"	"5.125E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDAPWQAR"	"[K].eIPVDAPWQAR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"P21396"	"Amine oxidase [flavin-containing] A OS=Rattus norvegicus OX=10116 GN=Maoa PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"755.91492"	"1510.82256"	"1510.82154"	"0.67"	"0.00051"	"8/92"	"8"	"92"	"280064.030395508"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"96.7910"	"34266"	"34266"	"34235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"13.3"	""	"16.0"	""	"24.4"	""	"26.3"	"34.1"	""	"904"	"24"	"36.000"	"29.000"	"0.164111280756086"	"18"	"0.0001686"	"0.001121"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGEVVVPK"	"[K].vEPGEVVVPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"755.96460"	"1510.92192"	"1510.92450"	"-1.71"	"-0.00129"	"9/78"	"9"	"78"	"200581.190185547"	"HCD"	"MS2"	"48.45198"	"16.4"	"100.000"	"81.2302"	"28021"	"28021"	"27992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"19.0"	""	"21.3"	""	"20.2"	""	"39.3"	"35.6"	""	"356"	"21"	"32.000"	"25.000"	"0.135026808355195"	"15"	"0.002922"	"0.03133"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPGEVVVPK"	"[K].vEPGEVVVPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"P27008"	"Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus OX=10116 GN=Parp1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"755.96552"	"1510.92375"	"1510.92450"	"-0.49"	"-0.00037"	"6/78"	"6"	"78"	"170582.958984375"	"HCD"	"MS2"	"35.72"	"14.3"	"100.000"	"81.1174"	"27948"	"27948"	"27923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.0"	""	"21.0"	""	"11.1"	""	"20.1"	""	"43.7"	"26.6"	""	"357"	"9"	"32.000"	"25.000"	"2.1559476956656"	"13"	"0.007412"	"0.09358"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEMR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"756.37292"	"1511.73857"	"1511.73953"	"-0.63"	"-0.00048"	"9/102"	"9"	"102"	"362073.823120117"	"HCD"	"MS2"	"25.5488"	"21.3"	"100.000"	"72.8169"	"24580"	"24580"	"24554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.5"	""	"27.3"	""	"27.0"	""	"33.6"	""	"48.5"	"41.8"	""	"562"	"45"	"34.000"	"27.000"	"0.000821686818173976"	"23"	"0"	"0.0001193"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLGTDLMNEMR"	"[K].sLGTDLmNEMR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"756.37305"	"1511.73882"	"1511.73953"	"-0.47"	"-0.00036"	"8/102"	"8"	"102"	"317770.212036133"	"HCD"	"MS2"	"21.85896"	"20.3"	"100.000"	"72.8966"	"24642"	"24642"	"24616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"20.1"	""	"24.4"	""	"39.9"	""	"43.5"	"42.2"	""	"558"	"34"	"34.000"	"27.000"	"0.0111584585183346"	"24"	"0.0001686"	"0.001475"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"504.60785"	"1511.80899"	"1511.81059"	"-1.06"	"-0.00053"	"9/90"	"9"	"90"	"3342948.82263184"	"HCD"	"MS2"	"13.01519"	"112.4"	"100.000"	"54.9991"	"17353"	"17353"	"17335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.3"	""	"139.7"	""	"155.6"	""	"177.4"	""	"214.9"	"207.3"	""	"880"	"38"	"36.000"	"29.000"	"0.00641878274521153"	"20"	"9.9E-05"	"0.0007522"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"756.40826"	"1511.80925"	"1511.81059"	"-0.89"	"-0.00067"	"5/90"	"5"	"90"	"227294.055786133"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"55.1621"	"17454"	"17454"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"28.9"	""	"36.0"	""	"38.0"	"0.5"	"37.2"	"58.5"	""	"878"	"32"	"36.000"	"29.000"	"0.0281491004120886"	"23"	"0.0001686"	"0.001505"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8545"	"0.0000"	"1"	"1"	"1"	"756.40826"	"1511.80925"	"1511.81059"	"-0.89"	"-0.00067"	"8/90"	"8"	"90"	"3073157.64526367"	"HCD"	"MS2"	"0"	"294.7"	"100.000"	"54.8380"	"17322"	"17322"	"17306"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"474.0"	""	"368.6"	""	"389.1"	""	"440.2"	"0.2"	"543.4"	"577.2"	""	"878"	"55"	"36.000"	"29.000"	"0.000155404832735628"	"24"	"0"	"6.148E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"504.60822"	"1511.81009"	"1511.81059"	"-0.33"	"-0.00017"	"9/90"	"9"	"90"	"3160906.18859863"	"HCD"	"MS2"	"15.50516"	"104.8"	"100.000"	"54.6290"	"17237"	"17237"	"17220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.0"	"3.5"	"125.7"	""	"146.8"	""	"169.6"	""	"197.2"	"197.5"	""	"871"	"38"	"36.000"	"29.000"	"0.00630940142218743"	"21"	"9.9E-05"	"0.001014"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"756.40924"	"1511.81120"	"1511.81059"	"0.40"	"0.00031"	"8/90"	"8"	"90"	"3592778.53399658"	"HCD"	"MS2"	"0"	"325.4"	"100.000"	"55.1600"	"17419"	"17419"	"17405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"505.9"	""	"402.6"	""	"427.3"	""	"499.5"	""	"611.2"	"639.8"	""	"860"	"57"	"36.000"	"29.000"	"9.51630725130425E-05"	"21"	"0"	"0.0001254"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8684"	"0.0000"	"1"	"1"	"1"	"756.40930"	"1511.81133"	"1511.81059"	"0.49"	"0.00037"	"11/90"	"11"	"90"	"264657.378662109"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"55.4933"	"17555"	"17555"	"17528"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.0"	""	"38.6"	""	"41.9"	""	"47.5"	""	"61.5"	"64.8"	""	"860"	"38"	"36.000"	"29.000"	"0.00702212337594565"	"19"	"0.0001991"	"0.003185"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"756.40955"	"1511.81182"	"1511.81059"	"0.81"	"0.00061"	"8/90"	"8"	"90"	"1120844.67279053"	"HCD"	"MS2"	"0"	"109.8"	"100.000"	"54.8613"	"17297"	"17297"	"17273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.2"	""	"134.2"	""	"140.3"	""	"178.4"	""	"196.1"	"207.9"	""	"872"	"52"	"36.000"	"29.000"	"0.000269455150460349"	"20"	"0"	"4.585E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDNDTFTVK"	"[K].nDNDTFTVk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"756.40967"	"1511.81206"	"1511.81059"	"0.97"	"0.00073"	"8/90"	"8"	"90"	"1733277.13250732"	"HCD"	"MS2"	"0"	"179.6"	"100.000"	"54.5279"	"17195"	"17195"	"17173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"285.0"	""	"202.8"	""	"240.7"	""	"285.0"	""	"348.7"	"341.0"	""	"874"	"56"	"36.000"	"29.000"	"9.85102535710612E-05"	"26"	"0"	"0.0001286"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSmIDEAk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"756.41412"	"1511.82097"	"1511.82136"	"-0.26"	"-0.00019"	"4/72"	"4"	"72"	"193022.79083252"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"81.8850"	"28287"	"28287"	"28259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"23.0"	""	"19.5"	""	"19.9"	""	"37.5"	"28.4"	""	"871"	"12"	"36.000"	"29.000"	"2.70388464407193"	"13"	"0.007069"	"0.08969"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSmIDEAk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"756.41449"	"1511.82170"	"1511.82136"	"0.23"	"0.00017"	"7/72"	"7"	"72"	"167225.661071777"	"HCD"	"MS2"	"38.80047"	"14.8"	"100.000"	"85.3765"	"29697"	"29697"	"29669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.6"	""	"18.6"	""	"16.3"	""	"18.7"	"1.1"	"36.2"	"29.9"	""	"869"	"14"	"36.000"	"29.000"	"1.67105129298706"	"13"	"0.002189"	"0.02128"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMSMIDEAK"	"[K].iMSmIDEAk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.41461"	"1511.82195"	"1511.82136"	"0.39"	"0.00029"	"5/72"	"5"	"72"	"212723.493835449"	"HCD"	"MS2"	"20.53883"	"16.9"	"100.000"	"81.8115"	"28229"	"28229"	"28199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.6"	""	"21.9"	""	"21.4"	""	"21.1"	"1.7"	"35.6"	"35.8"	""	"866"	"21"	"36.000"	"29.000"	"0.374531108829875"	"14"	"0.0042"	"0.04524"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVETEDAYK"	"[K].vVETEDAYk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"Q5U316"	"Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.42017"	"1511.83306"	"1511.83575"	"-1.78"	"-0.00135"	"12/70"	"12"	"70"	"915279.295837402"	"HCD"	"MS2"	"0"	"82.4"	"100.000"	"56.9847"	"18188"	"18188"	"18166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.3"	""	"104.6"	""	"118.5"	""	"118.1"	""	"154.8"	"159.0"	""	"811"	"10"	"36.000"	"29.000"	"4.43599306523334"	"14"	"0.008522"	"0.1084"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEIELSYAK"	"[R].tEIELSYAk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.43878"	"1511.87029"	"1511.87213"	"-1.22"	"-0.00092"	"11/74"	"11"	"74"	"238395.165649414"	"HCD"	"MS2"	"49.87812"	"20.4"	"100.000"	"84.7776"	"29425"	"29425"	"29406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"25.2"	""	"25.6"	""	"34.2"	""	"41.0"	"44.8"	""	"636"	"22"	"35.000"	"28.000"	"0.183411735358736"	"14"	"0.0001991"	"0.002324"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFTQPEASYGR"	"[K].qFTQPEASYGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"756.88513"	"1512.76299"	"1512.76442"	"-0.95"	"-0.00072"	"6/110"	"6"	"110"	"292595.642578125"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"47.2320"	"14231"	"14231"	"14209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.3"	""	"13.9"	""	"21.4"	""	"43.0"	""	"48.7"	"39.2"	""	"712"	"29"	"35.000"	"28.000"	"0.0459674061406418"	"21"	"0.0001991"	"0.002575"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFTQPEASYGR"	"[K].qFTQPEASYGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"Q9JHL4"	"Drebrin-like protein OS=Rattus norvegicus OX=10116 GN=Dbnl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"756.88586"	"1512.76445"	"1512.76442"	"0.02"	"0.00001"	"8/110"	"8"	"110"	"277007.342224121"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"47.5310"	"14315"	"14315"	"14289"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.6"	""	"17.2"	""	"21.9"	""	"43.6"	""	"47.8"	"36.9"	""	"715"	"28"	"35.000"	"28.000"	"0.0632813952598478"	"22"	"0.0001686"	"0.001332"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPYSSTGLGGSR"	"[R].tTPYSSTGLGGSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62025"	"Phosphatase and actin regulator 2 OS=Rattus norvegicus OX=10116 GN=Phactr2 PE=1 SV=1"	"P62025"	"Phosphatase and actin regulator 2 OS=Rattus norvegicus OX=10116 GN=Phactr2 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"756.89581"	"1512.78435"	"1512.78555"	"-0.79"	"-0.00060"	"16/118"	"16"	"118"	"376269.285705566"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"41.5170"	"11908"	"11908"	"11878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"24.9"	""	"27.1"	""	"51.1"	""	"53.9"	"42.7"	""	"780"	"36"	"35.000"	"28.000"	"0.0106185351015039"	"21"	"0"	"0.0003478"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPYSSTGLGGSR"	"[R].tTPYSSTGLGGSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P62025"	"Phosphatase and actin regulator 2 OS=Rattus norvegicus OX=10116 GN=Phactr2 PE=1 SV=1"	"P62025"	"Phosphatase and actin regulator 2 OS=Rattus norvegicus OX=10116 GN=Phactr2 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"756.89636"	"1512.78545"	"1512.78555"	"-0.07"	"-0.00005"	"16/118"	"16"	"118"	"365420.207580566"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"41.6620"	"11932"	"11932"	"11906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"26.2"	""	"22.4"	""	"49.4"	""	"50.7"	"45.6"	""	"789"	"41"	"35.000"	"28.000"	"0.00345181099327223"	"24"	"0"	"0.0001567"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNIPYFETSAK"	"[K].NNIPYFETSAk.[E]"	"K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"756.89838"	"1512.78948"	"1512.78957"	"-0.06"	"-0.00005"	"6/104"	"6"	"104"	"189436.030761719"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"72.6278"	"24503"	"24503"	"24480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"16.3"	""	"18.5"	""	"22.6"	""	"29.9"	"34.4"	""	"782"	"19"	"35.000"	"28.000"	"0.454126408011574"	"15"	"0.003001"	"0.03242"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNIPYFETSAK"	"[K].NNIPYFETSAk.[E]"	"K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.89844"	"1512.78960"	"1512.78957"	"0.02"	"0.00001"	"5/104"	"5"	"104"	"227442.499145508"	"HCD"	"MS2"	"31.87353"	"15.3"	"100.000"	"72.7904"	"24599"	"24599"	"24568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"17.7"	""	"20.7"	""	"27.7"	""	"31.5"	"28.5"	""	"782"	"20"	"35.000"	"28.000"	"0.352514314803929"	"14"	"0.001872"	"0.01582"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNFDAFPDK"	"[R].tNFDAFPDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"756.90784"	"1512.80840"	"1512.80987"	"-0.97"	"-0.00073"	"6/92"	"6"	"92"	"312540.348510742"	"HCD"	"MS2"	"14.0768"	"29.2"	"100.000"	"88.6010"	"30957"	"30957"	"30940"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"34.1"	""	"33.8"	""	"31.7"	""	"36.5"	"98.5"	""	"828"	"28"	"36.000"	"29.000"	"0.0736207675756114"	"17"	"0.0001991"	"0.00372"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNFDAFPDK"	"[R].tNFDAFPDk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"756.90839"	"1512.80950"	"1512.80987"	"-0.24"	"-0.00018"	"5/92"	"5"	"92"	"320908.632385254"	"HCD"	"MS2"	"11.69046"	"33.8"	"100.000"	"88.4959"	"30954"	"30954"	"30936"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.2"	""	"47.6"	""	"37.2"	""	"37.8"	""	"37.7"	"105.4"	""	"812"	"27"	"36.000"	"29.000"	"0.0834691581969562"	"20"	"0.004852"	"0.06"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSSLTEEISR"	"[R].yVSSLTEEISR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"756.90906"	"1512.81084"	"1512.81070"	"0.09"	"0.00007"	"8/94"	"8"	"94"	"281831.943115234"	"HCD"	"MS2"	"21.63228"	"19.5"	"100.000"	"89.8015"	"31439"	"31439"	"31420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"23.4"	""	"17.8"	""	"34.3"	"1.0"	"44.4"	"43.5"	""	"801"	"51"	"36.000"	"29.000"	"0.000306621441067958"	"20"	"0"	"9.531E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVSSLTEEISR"	"[R].yVSSLTEEISR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"Q62902"	"Protein ERGIC-53 OS=Rattus norvegicus OX=10116 GN=Lman1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"756.90924"	"1512.81120"	"1512.81070"	"0.33"	"0.00025"	"8/94"	"8"	"94"	"279472.232788086"	"HCD"	"MS2"	"17.66408"	"20.0"	"100.000"	"89.6941"	"31436"	"31436"	"31423"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"20.4"	""	"19.6"	""	"39.1"	""	"41.6"	"46.2"	""	"807"	"52"	"36.000"	"29.000"	"0.000237051953745765"	"22"	"0"	"1.868E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGGLPQEPTSR"	"[K].lEGGLPQEPTSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"756.91162"	"1512.81597"	"1512.82194"	"-3.95"	"-0.00299"	"7/116"	"7"	"116"	"529088.459716797"	"HCD"	"MS2"	"13.10478"	"26.8"	"100.000"	"59.4308"	"19150"	"19150"	"19130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"37.7"	""	"33.0"	""	"46.3"	"0.8"	"55.1"	"52.3"	""	"780"	"20"	"35.000"	"28.000"	"0.420789221669633"	"22"	"0.00296"	"0.03139"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFVAQFK"	"[K].eGEFVAQFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"756.92554"	"1512.84380"	"1512.84625"	"-1.62"	"-0.00123"	"8/72"	"8"	"72"	"284599.079345703"	"HCD"	"MS2"	"12.35235"	"25.4"	"100.000"	"94.7356"	"33432"	"33432"	"33418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"27.0"	""	"28.4"	""	"40.8"	"2.3"	"55.0"	"51.6"	""	"733"	"47"	"35.000"	"28.000"	"0.000714618045811323"	"23"	"0"	"7.909E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFVAQFK"	"[K].eGEFVAQFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"756.92584"	"1512.84441"	"1512.84625"	"-1.22"	"-0.00092"	"7/72"	"7"	"72"	"295214.72857666"	"HCD"	"MS2"	"10.85358"	"27.9"	"100.000"	"94.7393"	"33468"	"33468"	"33447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"26.6"	""	"35.0"	""	"45.8"	""	"54.7"	"62.3"	""	"754"	"36"	"35.000"	"28.000"	"0.0084789358640009"	"22"	"0"	"9.27E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIQDEFFK"	"[K].qIQDEFFk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"Q6AYT5"	"Protein-glutamate O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Armt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.92670"	"1512.84612"	"1512.84625"	"-0.09"	"-0.00007"	"6/72"	"6"	"72"	"165788.474731445"	"HCD"	"MS2"	"25.47661"	"17.3"	"100.000"	"98.0216"	"34795"	"34795"	"34773"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"17.1"	""	"24.5"	""	"23.3"	""	"33.4"	"39.2"	""	"735"	"21"	"35.000"	"28.000"	"0.302870757267278"	"14"	"0.0001991"	"0.005334"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGEFVAQFK"	"[K].eGEFVAQFk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"Q6AYD3"	"Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"756.92725"	"1512.84722"	"1512.84625"	"0.64"	"0.00048"	"5/72"	"5"	"72"	"114950.174682617"	"HCD"	"MS2"	"28.37422"	"10.5"	"100.000"	"95.0351"	"33554"	"33554"	"33530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"11.7"	""	"15.1"	""	"15.9"	""	"25.7"	"20.0"	""	"716"	"11"	"35.000"	"28.000"	"2.66000851367019"	"13"	"0.009713"	"0.129"	"0.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"756.93225"	"1512.85723"	"1512.85832"	"-0.73"	"-0.00055"	"9/106"	"9"	"106"	"1396142.84625244"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"65.2078"	"21494"	"21494"	"21473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.2"	""	"73.6"	""	"63.9"	""	"72.8"	"2.2"	"76.5"	"85.1"	""	"738"	"58"	"35.000"	"28.000"	"6.48673813550758E-05"	"21"	"0"	"1.546E-06"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"756.93243"	"1512.85759"	"1512.85832"	"-0.48"	"-0.00037"	"7/106"	"7"	"106"	"207585.625427246"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"66.0888"	"21887"	"21887"	"21862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"20.1"	""	"20.7"	""	"25.0"	""	"31.2"	"32.1"	""	"734"	"37"	"35.000"	"28.000"	"0.00766771680023433"	"22"	"9.9E-05"	"0.0005366"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"756.93243"	"1512.85759"	"1512.85832"	"-0.48"	"-0.00037"	"10/106"	"10"	"106"	"4920474.99658203"	"HCD"	"MS2"	"0"	"131.8"	"100.000"	"65.5049"	"21616"	"21616"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.2"	"2.6"	"181.5"	""	"182.0"	""	"207.5"	""	"234.9"	"251.1"	""	"734"	"70"	"35.000"	"28.000"	"3.48069576031429E-06"	"24"	"0"	"9.126E-07"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"504.95740"	"1512.85764"	"1512.85832"	"-0.45"	"-0.00023"	"6/106"	"6"	"106"	"3362431.31634521"	"HCD"	"MS2"	"11.23789"	"65.5"	"100.000"	"65.4255"	"21617"	"21617"	"21600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.8"	""	"96.1"	""	"92.0"	""	"105.1"	""	"128.4"	"116.2"	""	"734"	"38"	"35.000"	"28.000"	"0.00626132236764146"	"22"	"9.9E-05"	"0.0004029"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"504.95743"	"1512.85773"	"1512.85832"	"-0.39"	"-0.00020"	"5/106"	"5"	"106"	"1587810.07342529"	"HCD"	"MS2"	"20.55645"	"42.6"	"100.000"	"65.7386"	"21744"	"21744"	"21725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"48.6"	""	"58.4"	""	"71.1"	"0.4"	"80.4"	"97.4"	""	"734"	"36"	"35.000"	"28.000"	"0.00838814760838783"	"21"	"0"	"0.0002382"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"756.93274"	"1512.85820"	"1512.85832"	"-0.08"	"-0.00006"	"10/106"	"10"	"106"	"4768959.26904297"	"HCD"	"MS2"	"0"	"129.9"	"100.000"	"65.4646"	"21633"	"21633"	"21616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.3"	""	"181.4"	""	"184.8"	""	"203.7"	"0.6"	"239.2"	"224.8"	""	"733"	"72"	"35.000"	"28.000"	"2.24943774892897E-06"	"23"	"0"	"2.613E-07"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"504.95761"	"1512.85828"	"1512.85832"	"-0.03"	"-0.00001"	"7/106"	"7"	"106"	"2190346.10766602"	"HCD"	"MS2"	"10.09182"	"48.8"	"100.000"	"65.6616"	"21679"	"21679"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.6"	""	"60.5"	""	"72.5"	""	"78.2"	"0.2"	"96.0"	"91.1"	""	"733"	"38"	"35.000"	"28.000"	"0.00543342878205992"	"21"	"0"	"0.0002928"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"756.93286"	"1512.85845"	"1512.85832"	"0.08"	"0.00006"	"9/106"	"9"	"106"	"858299.946655273"	"HCD"	"MS2"	"2.171393"	"30.8"	"100.000"	"65.8089"	"21740"	"21740"	"21723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"41.4"	""	"41.2"	""	"42.2"	""	"62.9"	"63.1"	""	"720"	"64"	"35.000"	"28.000"	"1.46319598499477E-05"	""	"0"	"1.038E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"504.95767"	"1512.85846"	"1512.85832"	"0.09"	"0.00005"	"5/106"	"5"	"106"	"2929066.47930908"	"HCD"	"MS2"	"27.06961"	"63.7"	"100.000"	"65.3229"	"21541"	"21541"	"21519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.0"	""	"83.3"	""	"82.7"	""	"100.6"	""	"132.7"	"123.8"	""	"720"	"36"	"35.000"	"28.000"	"0.00824712354996398"	"21"	"0"	"0.0002322"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGQk.[M]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"756.93298"	"1512.85869"	"1512.85832"	"0.24"	"0.00018"	"9/106"	"9"	"106"	"1500120.31036377"	"HCD"	"MS2"	"0"	"47.8"	"100.000"	"65.7710"	"21758"	"21758"	"21741"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"61.8"	""	"66.9"	""	"65.8"	"2.1"	"91.1"	"96.1"	""	"722"	"66"	"35.000"	"28.000"	"9.80634576050909E-06"	"24"	"0"	"8.204E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6780"	"0.0000"	"1"	"1"	"1"	"757.42419"	"1513.84111"	"1513.84234"	"-0.81"	"-0.00061"	"10/104"	"10"	"104"	"1672934.73510742"	"HCD"	"MS2"	"0"	"57.2"	"100.000"	"92.1557"	"32427"	"32427"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.2"	""	"83.7"	""	"89.9"	""	"100.4"	"1.0"	"102.7"	"80.3"	""	"761"	"59"	"35.000"	"28.000"	"4.69196389043599E-05"	""	"0"	"3.144E-07"	"1.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"757.42450"	"1513.84172"	"1513.84234"	"-0.41"	"-0.00031"	"15/104"	"15"	"104"	"1574404.03869629"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"92.2350"	"32424"	"32424"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.7"	""	"74.6"	""	"82.0"	""	"96.2"	""	"97.1"	"85.0"	""	"754"	"58"	"35.000"	"28.000"	"5.81221070761984E-05"	""	"0"	"5.467E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"0.8415"	"0.0000"	"1"	"1"	"1"	"505.28558"	"1513.84220"	"1513.84234"	"-0.09"	"-0.00005"	"14/104"	"14"	"104"	"2141653.91644287"	"HCD"	"MS2"	"3.108398"	"17.0"	"100.000"	"91.9030"	"32289"	"32289"	"32271"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.6"	""	"22.5"	""	"20.9"	""	"31.7"	""	"30.9"	"31.8"	""	"766"	"82"	"35.000"	"28.000"	"2.41100868034306E-07"	""	"0"	"1.382E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6724"	"0.0000"	"1"	"1"	"1"	"757.42487"	"1513.84245"	"1513.84234"	"0.08"	"0.00006"	"10/104"	"10"	"104"	"3071304.76342773"	"HCD"	"MS2"	"0"	"95.2"	"100.000"	"91.9355"	"32303"	"32303"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.4"	""	"135.6"	""	"154.9"	""	"164.1"	""	"161.1"	"140.6"	""	"753"	"58"	"35.000"	"28.000"	"5.76454429323284E-05"	""	"0"	"1.805E-07"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"505.28571"	"1513.84256"	"1513.84234"	"0.15"	"0.00008"	"16/104"	"16"	"104"	"2405402.31762695"	"HCD"	"MS2"	"5.421411"	"19.8"	"100.000"	"91.8773"	"32314"	"32314"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"29.3"	""	"25.8"	""	"32.9"	"0.8"	"37.9"	"34.6"	""	"757"	"68"	"35.000"	"28.000"	"6.124432942479E-06"	""	"0"	"2.139E-06"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.6346"	"0.0000"	"1"	"1"	"1"	"757.42493"	"1513.84258"	"1513.84234"	"0.16"	"0.00012"	"10/104"	"10"	"104"	"3302577.40093994"	"HCD"	"MS2"	"0"	"104.8"	"100.000"	"91.8679"	"32311"	"32311"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.8"	""	"168.8"	""	"171.1"	""	"165.4"	"1.4"	"172.5"	"150.9"	""	"757"	"52"	"35.000"	"28.000"	"0.000262461667577271"	""	"0"	"7.582E-07"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"757.42517"	"1513.84307"	"1513.84234"	"0.48"	"0.00036"	"15/104"	"15"	"104"	"452069.415649414"	"HCD"	"MS2"	"14.43543"	"22.7"	"100.000"	"91.5747"	"32192"	"32192"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.7"	""	"33.5"	""	"28.0"	""	"44.1"	""	"43.1"	"36.1"	""	"756"	"27"	"35.000"	"28.000"	"0.0699023537973714"	"19"	"0"	"0.0001709"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPGLTDTTVPR"	"[K].dIPGLTDTTVPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"2"	"2"	"0.5750"	"0.0000"	"1"	"1"	"1"	"757.42657"	"1513.84587"	"1513.84234"	"2.33"	"0.00177"	"6/104"	"6"	"104"	"355705.406921387"	"HCD"	"MS2"	"20.90423"	"19.1"	"100.000"	"91.6284"	"32178"	"32178"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.7"	""	"26.0"	""	"34.1"	""	"33.5"	""	"35.0"	"30.6"	""	"762"	"40"	"35.000"	"28.000"	"0.0041872122482379"	""	"0.0001991"	"0.002229"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASSVLLHTGQK"	"[M].tASSVLLHTGqk.[M]"	"N-Term(Prot)(Acetyl); Q11(Deamidated); K12(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"757.43683"	"1513.86638"	"1513.84234"	"15.88"	"0.01202"	"6/106"	"6"	"106"	"964457.217285156"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"65.1674"	"21511"	"21511"	"21492"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.0"	""	"53.9"	""	"47.5"	""	"69.5"	""	"64.9"	"71.3"	""	"649"	"18"	"35.000"	"28.000"	"0.556179146286484"	"20"	"0.004392"	"0.05163"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQEPGSVLK"	"[R].tPQEPGSVLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"757.45239"	"1513.89751"	"1513.89901"	"-0.99"	"-0.00075"	"7/98"	"7"	"98"	"298216.059448242"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"56.4366"	"17967"	"17967"	"17945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"30.5"	""	"34.6"	""	"38.7"	""	"41.0"	"38.4"	""	"648"	"43"	"35.000"	"28.000"	"0.00173598117034323"	"23"	"0.002559"	"0.02584"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQEPGSVLK"	"[R].tPQEPGSVLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"505.30432"	"1513.89841"	"1513.89901"	"-0.40"	"-0.00020"	"7/98"	"7"	"98"	"594372.100280762"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"56.4939"	"17990"	"17990"	"17968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.2"	""	"31.7"	""	"40.8"	""	"41.8"	""	"49.4"	"51.0"	""	"634"	"16"	"35.000"	"28.000"	"0.714593830252321"	"15"	"0.007989"	"0.1009"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQEPGSVLK"	"[R].tPQEPGSVLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"505.30447"	"1513.89887"	"1513.89901"	"-0.10"	"-0.00005"	"9/98"	"9"	"98"	"794928.450744629"	"HCD"	"MS2"	"30.60106"	"30.6"	"100.000"	"56.8321"	"18091"	"18091"	"18069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.9"	""	"39.7"	""	"45.0"	""	"47.9"	"0.8"	"56.1"	"60.0"	""	"629"	"34"	"34.000"	"27.000"	"0.0121512414283505"	"18"	"0.0001686"	"0.00167"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPQEPGSVLK"	"[R].tPQEPGSVLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"Q6MG06"	"Guanine nucleotide-binding protein-like 1 OS=Rattus norvegicus OX=10116 GN=Gnl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"757.45319"	"1513.89910"	"1513.89901"	"0.05"	"0.00004"	"6/98"	"6"	"98"	"353084.633422852"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"56.7932"	"18075"	"18075"	"18053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.6"	""	"35.0"	""	"44.0"	""	"42.3"	"0.2"	"53.9"	"47.4"	""	"601"	"37"	"34.000"	"27.000"	"0.00591349830056907"	"17"	"0.002035"	"0.01808"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQVDPLQVK"	"[K].eQVDPLQVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"757.46564"	"1513.92400"	"1513.89901"	"16.50"	"0.01249"	"11/84"	"11"	"84"	"421817.940063477"	"HCD"	"MS2"	"36.53938"	"27.7"	"100.000"	"75.2565"	"25602"	"25602"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"28.6"	""	"30.4"	""	"46.0"	""	"67.5"	"61.0"	""	"472"	"15"	"33.000"	"26.000"	"0.685349346453611"	"14"	"0.004893"	"0.06069"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYFPMQVVTR"	"[K].eYFPmQVVTR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"757.89685"	"1514.78642"	"1514.78747"	"-0.69"	"-0.00052"	"5/96"	"5"	"96"	"207499.814208984"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"74.0005"	"25092"	"25092"	"25065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"17.2"	""	"13.9"	""	"35.9"	""	"28.9"	"26.1"	""	"736"	"22"	"35.000"	"28.000"	"0.240906112056757"	"17"	"0.004893"	"0.06095"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYFPMQVVTR"	"[K].eYFPmQVVTR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"757.89685"	"1514.78642"	"1514.78747"	"-0.69"	"-0.00052"	"5/96"	"5"	"96"	"263003.059265137"	"HCD"	"MS2"	"48.65474"	"18.1"	"100.000"	"73.6664"	"24956"	"24956"	"24928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"21.0"	""	"24.4"	""	"38.1"	""	"35.3"	"29.4"	""	"736"	"20"	"35.000"	"28.000"	"0.373979518976416"	"17"	"0.005832"	"0.07168"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYFPMQVVTR"	"[K].eYFPmQVVTR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"757.89697"	"1514.78667"	"1514.78747"	"-0.53"	"-0.00040"	"5/96"	"5"	"96"	"237309.510253906"	"HCD"	"MS2"	"43.12193"	"18.9"	"100.000"	"73.5640"	"24885"	"24885"	"24858"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.0"	""	"14.9"	""	"25.0"	""	"46.2"	""	"33.7"	"28.2"	""	"736"	"24"	"35.000"	"28.000"	"0.149571145132798"	"19"	"0.004751"	"0.05586"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYFPMQVVTR"	"[K].eYFPmQVVTR.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P24155"	"Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"757.89850"	"1514.78972"	"1514.78747"	"1.49"	"0.00113"	"4/96"	"4"	"96"	"179131.52520752"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"73.8911"	"25018"	"25018"	"24993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"17.6"	""	"14.4"	""	"33.7"	""	"20.3"	"19.9"	""	"765"	"12"	"35.000"	"28.000"	"2.27316750670457"	"18"	"0.009514"	"0.1268"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"757.89911"	"1514.79094"	"1514.79250"	"-1.03"	"-0.00078"	"8/92"	"8"	"92"	"553819.143310547"	"HCD"	"MS2"	"0"	"51.4"	"100.000"	"52.8299"	"16468"	"16468"	"16448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.2"	""	"72.9"	""	"73.7"	""	"51.6"	"0.1"	"91.0"	"120.3"	""	"754"	"55"	"35.000"	"28.000"	"0.000128926249827668"	"21"	"0"	"3.684E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"505.60205"	"1514.79160"	"1514.79250"	"-0.60"	"-0.00030"	"11/92"	"11"	"92"	"3340522.69262695"	"HCD"	"MS2"	"10.50262"	"105.3"	"100.000"	"52.5240"	"16343"	"16343"	"16323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.4"	"2.4"	"135.3"	""	"152.0"	""	"119.2"	""	"175.7"	"244.8"	""	"759"	"44"	"35.000"	"28.000"	"0.00165657758335143"	"23"	"0"	"0.0001169"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"757.89954"	"1514.79180"	"1514.79250"	"-0.47"	"-0.00035"	"8/92"	"8"	"92"	"2293086.02593994"	"HCD"	"MS2"	"0"	"203.6"	"100.000"	"52.5213"	"16342"	"16342"	"16323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"389.8"	""	"253.3"	""	"309.2"	""	"189.9"	""	"343.0"	"442.1"	""	"760"	"52"	"35.000"	"28.000"	"0.000256911530648953"	"18"	"0"	"0.0001512"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"757.89960"	"1514.79192"	"1514.79250"	"-0.38"	"-0.00029"	"8/92"	"8"	"92"	"1204186.60498047"	"HCD"	"MS2"	"0"	"106.0"	"100.000"	"52.4063"	"16329"	"16329"	"16310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"190.6"	""	"133.6"	""	"157.0"	""	"97.8"	"0.2"	"179.9"	"244.8"	""	"760"	"50"	"35.000"	"28.000"	"0.00038"	"22"	"0"	"4.331E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"757.89960"	"1514.79192"	"1514.79250"	"-0.38"	"-0.00029"	"8/92"	"8"	"92"	"1715261.49731445"	"HCD"	"MS2"	"0"	"150.3"	"100.000"	"52.1138"	"16210"	"16210"	"16187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.0"	""	"182.1"	""	"220.9"	""	"152.0"	""	"261.6"	"330.6"	""	"760"	"49"	"35.000"	"28.000"	"0.000435294917749304"	"18"	"0"	"0.000138"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAMAEk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"505.60217"	"1514.79197"	"1514.79250"	"-0.35"	"-0.00018"	"7/92"	"7"	"92"	"3874794.87335205"	"HCD"	"MS2"	"10.12531"	"117.8"	"100.000"	"52.2176"	"16252"	"16252"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.2"	""	"142.7"	""	"183.6"	""	"124.1"	"0.1"	"193.2"	"264.0"	""	"760"	"48"	"35.000"	"28.000"	"0.000599492282485752"	"18"	"0"	"0.0001157"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FINDQYEK"	"[K].fINDQYEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"757.91510"	"1514.82292"	"1514.82552"	"-1.71"	"-0.00130"	"7/72"	"7"	"72"	"615026.190124512"	"HCD"	"MS2"	"21.40857"	"55.6"	"100.000"	"73.3174"	"24784"	"24784"	"24762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.1"	""	"70.7"	""	"67.1"	""	"99.7"	""	"100.3"	"102.6"	""	"804"	"35"	"36.000"	"29.000"	"0.0132198355612145"	"21"	"9.9E-05"	"0.0007387"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FINDQYEK"	"[K].fINDQYEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"757.91620"	"1514.82512"	"1514.82552"	"-0.26"	"-0.00020"	"14/72"	"14"	"72"	"612178.825012207"	"HCD"	"MS2"	"25.50625"	"60.3"	"100.000"	"73.0062"	"24657"	"24657"	"24634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.7"	""	"76.6"	""	"80.3"	""	"102.2"	"0.8"	"104.4"	"96.0"	""	"798"	"28"	"36.000"	"29.000"	"0.0638223653417253"	"24"	"9.9E-05"	"0.000806"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FINDQYEK"	"[K].fINDQYEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"757.91650"	"1514.82573"	"1514.82552"	"0.14"	"0.00011"	"7/72"	"7"	"72"	"540329.096496582"	"HCD"	"MS2"	"22.42648"	"50.7"	"100.000"	"73.4591"	"24871"	"24871"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.4"	""	"59.6"	""	"71.2"	""	"81.8"	"0.5"	"92.5"	"96.9"	""	"793"	"33"	"35.000"	"28.000"	"0.0179987851001806"	"20"	"9.9E-05"	"0.0005351"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FINDQYEK"	"[K].fINDQYEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"505.61353"	"1514.82602"	"1514.82552"	"0.34"	"0.00017"	"8/72"	"8"	"72"	"1020183.09918213"	"HCD"	"MS2"	"73.82095"	"40.7"	"100.000"	"73.0914"	"24692"	"24692"	"24666"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"51.8"	""	"58.6"	""	"65.1"	""	"75.3"	"69.2"	""	"800"	"25"	"36.000"	"29.000"	"0.117235729810013"	"21"	"0.001615"	"0.01401"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FINDQYEK"	"[K].fINDQYEk.[Y]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"757.91705"	"1514.82683"	"1514.82552"	"0.87"	"0.00066"	"7/72"	"7"	"72"	"679825.161315918"	"HCD"	"MS2"	"16.08678"	"67.1"	"100.000"	"73.1574"	"24748"	"24748"	"24728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.7"	""	"88.1"	""	"86.1"	""	"101.7"	""	"121.0"	"125.1"	""	"787"	"38"	"35.000"	"28.000"	"0.00641127988843731"	"24"	"9.9E-05"	"0.0004399"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFVYEK"	"[R].iEEFVYEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"757.92853"	"1514.84978"	"1514.85067"	"-0.59"	"-0.00044"	"8/66"	"8"	"66"	"328480.73840332"	"HCD"	"MS2"	"57.02361"	"17.2"	"100.000"	"103.6715"	"37048"	"37048"	"37026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"28.8"	""	"25.5"	""	"28.7"	""	"25.5"	"30.6"	""	"807"	"14"	"36.000"	"29.000"	"1.4382803233749"	"16"	"0.001049"	"0.008911"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEEFVYEK"	"[R].iEEFVYEk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"Q6AYE2"	"Endophilin-B1 OS=Rattus norvegicus OX=10116 GN=Sh3glb1 PE=2 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"757.92963"	"1514.85198"	"1514.85067"	"0.86"	"0.00065"	"8/66"	"8"	"66"	"324910.05090332"	"HCD"	"MS2"	"47.26974"	"19.3"	"100.000"	"103.8583"	"37140"	"37140"	"37118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"29.8"	""	"27.5"	""	"34.9"	""	"29.8"	"31.6"	""	"790"	"14"	"35.000"	"28.000"	"1.72027190105799"	"21"	"0.001596"	"0.01289"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVIVDPETGK"	"[R].vVIVDPETGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"757.96295"	"1514.91863"	"1514.91942"	"-0.52"	"-0.00039"	"9/78"	"9"	"78"	"310582.89074707"	"HCD"	"MS2"	"48.17997"	"19.8"	"100.000"	"86.1285"	"29969"	"29969"	"29957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"30.6"	""	"30.7"	""	"26.3"	""	"36.2"	"37.8"	""	"559"	"23"	"34.000"	"27.000"	"0.143675200617288"	"15"	"0.0001991"	"0.002722"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVIVDPETGK"	"[R].vVIVDPETGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.96307"	"1514.91887"	"1514.91942"	"-0.36"	"-0.00027"	"10/78"	"10"	"78"	"238354.981628418"	"HCD"	"MS2"	"28.09066"	"16.9"	"100.000"	"86.0933"	"29986"	"29986"	"29967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"24.8"	""	"29.7"	""	"19.4"	""	"33.1"	"32.5"	""	"558"	"27"	"34.000"	"27.000"	"0.0616033320512273"	"14"	"0.001103"	"0.008924"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSVPVAEIK"	"[K].dVSVPVAEIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"757.96320"	"1514.91911"	"1514.91942"	"-0.20"	"-0.00015"	"4/86"	"4"	"86"	"106712.721984863"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"94.3644"	"33282"	"33282"	"33255"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"9.5"	""	"7.2"	""	"10.1"	""	"15.3"	"18.3"	""	"562"	"18"	"34.000"	"27.000"	"0.497400617287195"	"21"	"0.001453"	"0.01166"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSVPVAEIK"	"[K].dVSVPVAEIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"757.96344"	"1514.91960"	"1514.91942"	"0.12"	"0.00009"	"6/86"	"6"	"86"	"350834.365112305"	"HCD"	"MS2"	"16.28395"	"25.3"	"100.000"	"93.7113"	"33016"	"33016"	"32993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"28.6"	""	"38.9"	""	"32.7"	""	"58.6"	"51.3"	""	"539"	"15"	"34.000"	"27.000"	"0.793521630308765"	"22"	"0.004213"	"0.0475"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVEVDPSLIK"	"[R].gVEVDPSLIk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"757.96344"	"1514.91960"	"1514.91942"	"0.12"	"0.00009"	"6/80"	"6"	"80"	"273193.068786621"	"HCD"	"MS2"	"30.81696"	"21.0"	"100.000"	"97.7537"	"34655"	"34655"	"34631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"28.2"	""	"25.0"	""	"37.7"	""	"41.7"	"39.1"	""	"539"	"26"	"34.000"	"27.000"	"0.0660022543677159"	"19"	"0.0001686"	"0.001946"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVEVDPSLIK"	"[R].gVEVDPSLIk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"Q2TA68"	"Dynamin-like 120 kDa protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Opa1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"757.96350"	"1514.91973"	"1514.91942"	"0.20"	"0.00015"	"8/80"	"8"	"80"	"323342.221984863"	"HCD"	"MS2"	"24.3504"	"23.7"	"100.000"	"97.8278"	"34716"	"34716"	"34694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.6"	""	"31.5"	""	"31.5"	""	"38.8"	""	"45.5"	"44.3"	""	"539"	"42"	"34.000"	"27.000"	"0.00183467342167963"	""	"0"	"0.0001915"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSVPVAEIK"	"[K].dVSVPVAEIk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"O88588"	"Phosphofurin acidic cluster sorting protein 1 OS=Rattus norvegicus OX=10116 GN=Pacs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6500"	"0.0000"	"1"	"1"	"1"	"757.96375"	"1514.92021"	"1514.91942"	"0.53"	"0.00040"	"11/86"	"11"	"86"	"253633.840637207"	"HCD"	"MS2"	"7.247971"	"20.9"	"100.000"	"94.0529"	"33155"	"33155"	"33131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"21.3"	""	"27.3"	""	"33.2"	""	"47.2"	"47.8"	""	"539"	"20"	"34.000"	"27.000"	"0.288774452761535"	"20"	"0.002189"	"0.02029"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVIVDPETGK"	"[R].vVIVDPETGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.96381"	"1514.92034"	"1514.91942"	"0.61"	"0.00046"	"10/78"	"10"	"78"	"151006.253417969"	"HCD"	"MS2"	"18.61382"	"10.8"	"100.000"	"85.8357"	"29852"	"29852"	"29834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"13.3"	""	"16.3"	""	"14.6"	""	"20.5"	"25.1"	""	"533"	"38"	"34.000"	"27.000"	"0.00393275791118025"	"15"	"9.9E-05"	"0.0007865"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVIVDPETGK"	"[R].vVIVDPETGk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.96399"	"1514.92070"	"1514.91942"	"0.85"	"0.00064"	"8/78"	"8"	"78"	"158311.009460449"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"85.7820"	"29860"	"29860"	"29834"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"13.8"	""	"15.2"	""	"10.2"	""	"13.2"	"20.8"	""	"539"	"12"	"34.000"	"27.000"	"1.63892382844614"	"13"	"0.00296"	"0.03175"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDHTFFPGYR"	"[R].mDHTFFPGYR.[K]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"505.91266"	"1515.72342"	"1515.72520"	"-1.17"	"-0.00059"	"4/76"	"4"	"76"	"4711764.35089111"	"HCD"	"MS2"	"16.27014"	"50.1"	"100.000"	"55.1831"	"17462"	"17462"	"17442"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.5"	""	"53.3"	""	"69.8"	""	"100.8"	"0.7"	"94.8"	"94.7"	""	"397"	"21"	"32.000"	"25.000"	"0.160605535986909"	"16"	"0.004114"	"0.04464"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDHTFFPGYR"	"[R].mDHTFFPGYR.[K]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.91290"	"1515.72416"	"1515.72520"	"-0.69"	"-0.00035"	"9/76"	"9"	"76"	"4714800.87023926"	"HCD"	"MS2"	"14.27369"	"44.2"	"100.000"	"55.5602"	"17582"	"17582"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.4"	""	"62.7"	""	"67.5"	""	"80.1"	""	"78.6"	"84.1"	""	"401"	"19"	"33.000"	"26.000"	"0.234484627899484"	"14"	"0.001453"	"0.01191"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFMIQGGDFTR"	"[K].dFMIQGGDFTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"758.37616"	"1515.74504"	"1515.74633"	"-0.85"	"-0.00064"	"7/110"	"7"	"110"	"320872.563659668"	"HCD"	"MS2"	"13.62107"	"20.5"	"100.000"	"98.6195"	"35035"	"35035"	"35013"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"25.9"	""	"23.8"	""	"37.0"	""	"43.1"	"36.9"	""	"511"	"38"	"34.000"	"27.000"	"0.00437916092068403"	"16"	"0"	"0.0002055"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFMIQGGDFTR"	"[K].dFMIQGGDFTR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"758.37683"	"1515.74639"	"1515.74633"	"0.04"	"0.00003"	"5/110"	"5"	"110"	"323800.923522949"	"HCD"	"MS2"	"11.53123"	"22.2"	"100.000"	"98.5867"	"34992"	"34992"	"34970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"21.9"	""	"29.5"	""	"36.2"	""	"51.6"	"48.3"	""	"520"	"33"	"34.000"	"27.000"	"0.0121891479357769"	"20"	"9.9E-05"	"0.0006364"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].IWHHTFYNELR.[V]"	""	"2"	"4"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"505.92072"	"1515.74759"	"1515.74916"	"-1.03"	"-0.00052"	"7/94"	"7"	"94"	"2517747.18231201"	"HCD"	"MS2"	"6.996097"	"36.7"	"100.000"	"41.6543"	"11963"	"11963"	"11939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"39.9"	""	"50.3"	""	"57.0"	"1.1"	"75.6"	"77.1"	"NoQuanLabels"	"521"	"53"	"34.000"	"27.000"	"0.000126417654292233"	"20"	"0"	"0.0003092"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].IWHHTFYNELR.[V]"	""	"2"	"4"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.92081"	"1515.74787"	"1515.74916"	"-0.85"	"-0.00043"	"7/94"	"7"	"94"	"2415706.93719482"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"41.8507"	"12009"	"12009"	"11986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.4"	""	"44.4"	""	"43.6"	""	"54.2"	"0.6"	"80.9"	"76.0"	"NoQuanLabels"	"518"	"53"	"34.000"	"27.000"	"0.000120586798222446"	"16"	"0"	"0.0002795"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].IWHHTFYNELR.[V]"	""	"2"	"4"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.92099"	"1515.74842"	"1515.74916"	"-0.49"	"-0.00025"	"9/94"	"9"	"94"	"3224318.93780518"	"HCD"	"MS2"	"16.87159"	"62.0"	"100.000"	"41.3483"	"11839"	"11839"	"11814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.2"	""	"80.1"	""	"76.4"	""	"104.2"	""	"122.5"	"129.4"	"NoQuanLabels"	"541"	"47"	"34.000"	"27.000"	"0.000542209683402276"	"15"	"0.0001991"	"0.005685"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IWHHTFYNELR"	"[K].IWHHTFYNELR.[V]"	""	"2"	"4"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P60711; P68136; P68035; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.92133"	"1515.74942"	"1515.74916"	"0.18"	"0.00009"	"7/94"	"7"	"94"	"2889069.59411621"	"HCD"	"MS2"	"4.502131"	"53.7"	"100.000"	"41.5459"	"11885"	"11885"	"11864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	""	"74.8"	""	"69.7"	""	"87.4"	""	"108.0"	"96.6"	"NoQuanLabels"	"538"	"34"	"34.000"	"27.000"	"0.0116346220548417"	"15"	"0.002189"	"0.02048"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"758.40332"	"1515.79936"	"1515.80047"	"-0.73"	"-0.00055"	"13/104"	"13"	"104"	"320554.894836426"	"HCD"	"MS2"	"32.63793"	"18.1"	"100.000"	"78.7848"	"27027"	"27027"	"26999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"20.8"	""	"21.4"	""	"26.3"	""	"38.5"	"42.6"	""	"844"	"19"	"36.000"	"29.000"	"0.517979355548848"	"19"	"0.002525"	"0.02473"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"758.40344"	"1515.79961"	"1515.80047"	"-0.57"	"-0.00043"	"8/104"	"8"	"104"	"286283.672424316"	"HCD"	"MS2"	"28.03834"	"17.8"	"100.000"	"78.6812"	"26958"	"26958"	"26929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.1"	""	"19.3"	""	"20.5"	""	"27.4"	""	"34.8"	"43.2"	""	"843"	"22"	"36.000"	"29.000"	"0.253394730349201"	"18"	"0.005152"	"0.06586"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"758.40393"	"1515.80058"	"1515.80047"	"0.07"	"0.00006"	"5/104"	"5"	"104"	"227855.862792969"	"HCD"	"MS2"	"18.52678"	"15.3"	"100.000"	"78.4759"	"26901"	"26901"	"26871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"23.2"	""	"22.1"	""	"22.6"	""	"30.7"	"27.8"	""	"836"	"26"	"36.000"	"29.000"	"0.11539215439001"	"27"	"0.0001991"	"0.005674"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVFNDELPAR"	"[K].ePVFNDELPAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"758.40466"	"1515.80205"	"1515.80047"	"1.04"	"0.00079"	"9/104"	"9"	"104"	"175764.715026855"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"78.3332"	"26816"	"26816"	"26790"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"20.8"	""	"20.8"	""	"19.5"	""	"20.7"	"30.7"	""	"839"	"5"	"36.000"	"29.000"	"12.9042261378373"	"13"	"0.007989"	"0.1012"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"758.44165"	"1515.87602"	"1515.87828"	"-1.49"	"-0.00113"	"14/94"	"14"	"94"	"2126030.40136719"	"HCD"	"MS2"	"0"	"141.1"	"100.000"	"48.5867"	"14744"	"14744"	"14728"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"203.4"	""	"159.2"	""	"182.2"	""	"253.6"	""	"267.1"	"273.6"	""	"890"	"49"	"36.000"	"29.000"	"0.000515655923489031"	"23"	"0"	"0.0001047"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"758.44189"	"1515.87651"	"1515.87828"	"-1.17"	"-0.00088"	"14/94"	"14"	"94"	"1952816.7522583"	"HCD"	"MS2"	"9.957146"	"127.7"	"100.000"	"48.2479"	"14644"	"14644"	"14632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.2"	""	"147.9"	""	"163.1"	""	"219.5"	""	"241.6"	"234.0"	""	"878"	"48"	"36.000"	"29.000"	"0.000730238153512504"	"23"	"0"	"2.44E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"758.44238"	"1515.87749"	"1515.87828"	"-0.52"	"-0.00040"	"8/94"	"8"	"94"	"673033.732971191"	"HCD"	"MS2"	"8.172207"	"52.7"	"100.000"	"48.8923"	"14869"	"14869"	"14851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.9"	""	"64.9"	""	"68.5"	""	"90.4"	""	"96.5"	"105.8"	""	"859"	"55"	"36.000"	"29.000"	"0.000151692171425645"	"27"	"0"	"7.04E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.6757"	"0.0000"	"1"	"1"	"1"	"758.44250"	"1515.87773"	"1515.87828"	"-0.36"	"-0.00027"	"8/94"	"8"	"94"	"767332.021362305"	"HCD"	"MS2"	"5.339919"	"57.9"	"100.000"	"48.5621"	"14771"	"14771"	"14750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.9"	""	"74.2"	""	"75.3"	""	"108.2"	"0.3"	"98.9"	"117.3"	""	"859"	"37"	"36.000"	"29.000"	"0.00849108460428044"	"27"	"0"	"0.0001801"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"505.96417"	"1515.87796"	"1515.87828"	"-0.21"	"-0.00011"	"7/94"	"7"	"94"	"2879762.95501709"	"HCD"	"MS2"	"25.08178"	"89.5"	"100.000"	"48.7061"	"14793"	"14793"	"14771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.7"	""	"99.7"	""	"121.0"	""	"159.6"	""	"176.1"	"184.7"	""	"862"	"43"	"36.000"	"29.000"	"0.00217008762387587"	"23"	"9.9E-05"	"0.0004837"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPSQSDPVLK"	"[R].sPSQSDPVLk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"505.96457"	"1515.87915"	"1515.87828"	"0.58"	"0.00029"	"7/94"	"7"	"94"	"3038179.05163574"	"HCD"	"MS2"	"24.30116"	"89.1"	"100.000"	"48.4059"	"14707"	"14707"	"14686"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.2"	""	"100.0"	""	"119.7"	""	"144.9"	"0.3"	"182.0"	"180.2"	""	"826"	"38"	"36.000"	"29.000"	"0.0072602245256494"	"23"	"9.9E-05"	"0.0008597"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSPEEIEK"	"[K].iLSPEEIEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.5385"	"0.0000"	"1"	"1"	"1"	"505.97220"	"1515.90204"	"1515.90343"	"-0.92"	"-0.00046"	"8/74"	"8"	"74"	"2006847.43029785"	"HCD"	"MS2"	"10.35927"	"56.4"	"100.000"	"96.2761"	"34089"	"34089"	"34073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.8"	""	"55.8"	""	"63.7"	""	"107.5"	"0.5"	"108.3"	"116.2"	""	"691"	"26"	"35.000"	"28.000"	"0.0958182096157212"	"26"	"0.0001991"	"0.002094"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSPEEIEK"	"[K].iLSPEEIEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"758.45471"	"1515.90215"	"1515.90343"	"-0.85"	"-0.00064"	"8/74"	"8"	"74"	"776045.038269043"	"HCD"	"MS2"	"31.9422"	"54.5"	"100.000"	"96.0548"	"33968"	"33968"	"33945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.4"	""	"54.8"	""	"66.1"	""	"102.6"	"1.2"	"107.8"	"115.4"	""	"687"	"40"	"35.000"	"28.000"	"0.00385413339052724"	""	"0.0001991"	"0.005676"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSPEEIEK"	"[K].iLSPEEIEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.5778"	"0.0000"	"1"	"1"	"1"	"758.45496"	"1515.90264"	"1515.90343"	"-0.52"	"-0.00040"	"14/74"	"14"	"74"	"2477327.37609863"	"HCD"	"MS2"	"0"	"163.0"	"100.000"	"96.3389"	"34083"	"34083"	"34066"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"240.9"	""	"146.4"	""	"180.0"	""	"282.5"	"2.0"	"356.2"	"340.7"	""	"687"	"45"	"35.000"	"28.000"	"0.00116392967633816"	""	"0.0009964"	"0.008476"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSPEEIEK"	"[K].iLSPEEIEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"505.97244"	"1515.90277"	"1515.90343"	"-0.43"	"-0.00022"	"9/74"	"9"	"74"	"1808279.519104"	"HCD"	"MS2"	"7.629357"	"54.7"	"100.000"	"96.1983"	"34025"	"34025"	"34013"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.8"	""	"58.5"	""	"66.0"	""	"99.6"	""	"106.5"	"105.4"	""	"685"	"33"	"35.000"	"28.000"	"0.0162802314885411"	""	"0.0001991"	"0.002277"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSPEEIEK"	"[K].iLSPEEIEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.5476"	"0.0000"	"1"	"1"	"1"	"758.45532"	"1515.90337"	"1515.90343"	"-0.04"	"-0.00003"	"8/74"	"8"	"74"	"2613553.64373779"	"HCD"	"MS2"	"0"	"167.4"	"100.000"	"96.3294"	"34111"	"34111"	"34100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.2"	""	"175.7"	""	"197.6"	""	"294.2"	"2.0"	"337.2"	"344.6"	""	"685"	"42"	"35.000"	"28.000"	"0.00241357376121247"	""	"0.001261"	"0.009738"	"0.244"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSPEEIEK"	"[K].iLSPEEIEk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"2"	"2"	"0.6053"	"0.0000"	"1"	"1"	"1"	"758.45544"	"1515.90361"	"1515.90343"	"0.12"	"0.00009"	"8/74"	"8"	"74"	"535873.264160156"	"HCD"	"MS2"	"39.10196"	"39.6"	"100.000"	"96.0590"	"34002"	"34002"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"43.3"	""	"43.7"	""	"75.5"	"0.3"	"88.5"	"71.9"	""	"672"	"38"	"35.000"	"28.000"	"0.00510903969990118"	""	"0.0001991"	"0.00366"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLTADPVVKTK"	"[K].qSLTADPVVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"1"	"3"	"3"	"0.1081"	"0.0000"	"1"	"1"	"1"	"505.97565"	"1515.91239"	"1515.89437"	"11.88"	"0.00600"	"8/128"	"8"	"128"	"4941791.47949219"	"HCD"	"MS2"	"35.8721"	"112.4"	"100.000"	"63.7237"	"20925"	"20925"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"157.7"	""	"127.5"	""	"137.4"	""	"199.5"	""	"230.5"	"214.7"	""	"628"	"37"	"34.000"	"27.000"	"0.00699728636870875"	""	"0.001872"	"0.0158"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLTADPVVKTK"	"[K].qSLTADPVVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"1"	"2"	"2"	"0.0822"	"0.0000"	"1"	"1"	"1"	"758.46045"	"1515.91362"	"1515.89437"	"12.70"	"0.00962"	"9/128"	"9"	"128"	"1957821.39233398"	"HCD"	"MS2"	"6.260784"	"138.5"	"100.000"	"63.7660"	"20910"	"20910"	"20894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.0"	""	"164.0"	""	"163.8"	""	"245.4"	"0.1"	"268.8"	"275.4"	""	"586"	"73"	"34.000"	"27.000"	"1.53414927919625E-06"	""	"0"	"0.0001017"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLTADPVVKTK"	"[K].qSLTADPVVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"1"	"3"	"3"	"0.0930"	"0.0000"	"1"	"1"	"1"	"505.97607"	"1515.91367"	"1515.89437"	"12.73"	"0.00643"	"8/128"	"8"	"128"	"4813687.63555908"	"HCD"	"MS2"	"34.79213"	"106.6"	"100.000"	"63.7365"	"20898"	"20898"	"20882"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.4"	""	"121.6"	""	"138.4"	""	"190.0"	""	"211.6"	"199.2"	""	"586"	"43"	"34.000"	"27.000"	"0.00140885929095771"	""	"0.0001991"	"0.005647"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSLTADPVVKTK"	"[K].qSLTADPVVKTK.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"1"	"2"	"2"	"0.0882"	"0.0000"	"1"	"1"	"1"	"758.46051"	"1515.91374"	"1515.89437"	"12.78"	"0.00968"	"9/128"	"9"	"128"	"1875844.99780273"	"HCD"	"MS2"	"21.4241"	"132.0"	"100.000"	"63.7627"	"20941"	"20941"	"20921"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"184.9"	""	"164.8"	""	"158.9"	""	"238.7"	"0.5"	"258.8"	"244.9"	""	"586"	"68"	"34.000"	"27.000"	"4.39407656802196E-06"	""	"0"	"0.0001005"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIAFHFNPR"	"[K].gNDIAFHFNPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"506.26633"	"1516.78443"	"1516.78583"	"-0.92"	"-0.00047"	"7/98"	"7"	"98"	"3151626.95202637"	"HCD"	"MS2"	"46.90213"	"66.3"	"100.000"	"63.8702"	"20984"	"20984"	"20967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.8"	""	"69.3"	""	"87.2"	""	"121.2"	""	"135.1"	"125.6"	""	"809"	"26"	"36.000"	"29.000"	"0.112439401680863"	"20"	"0"	"0.0001262"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIAFHFNPR"	"[K].gNDIAFHFNPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"506.26633"	"1516.78443"	"1516.78583"	"-0.92"	"-0.00047"	"8/98"	"8"	"98"	"3490727.19348145"	"HCD"	"MS2"	"31.32308"	"65.4"	"100.000"	"63.5697"	"20862"	"20862"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.5"	""	"82.3"	""	"78.2"	""	"105.1"	""	"145.1"	"124.9"	""	"809"	"33"	"36.000"	"29.000"	"0.0226943906305134"	"19"	"0"	"5.23E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIAFHFNPR"	"[K].gNDIAFHFNPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"506.26663"	"1516.78534"	"1516.78583"	"-0.32"	"-0.00016"	"13/98"	"13"	"98"	"1559537.45269775"	"HCD"	"MS2"	"49.51823"	"42.8"	"100.000"	"64.0410"	"21021"	"21021"	"21004"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.7"	""	"46.3"	""	"52.7"	""	"85.6"	"0.8"	"87.8"	"86.5"	""	"811"	"26"	"36.000"	"29.000"	"0.101155816177537"	"14"	"0"	"0.0001736"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNDIAFHFNPR"	"[K].gNDIAFHFNPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"P08699"	"Galectin-3 OS=Rattus norvegicus OX=10116 GN=Lgals3 PE=1 SV=4"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"506.26682"	"1516.78589"	"1516.78583"	"0.04"	"0.00002"	"11/98"	"11"	"98"	"3780646.38623047"	"HCD"	"MS2"	"36.00954"	"70.2"	"100.000"	"63.5918"	"20839"	"20839"	"20821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.4"	""	"86.0"	""	"94.6"	""	"128.1"	"2.1"	"121.0"	"126.6"	""	"812"	"25"	"36.000"	"29.000"	"0.117632149660674"	"20"	"0"	"0.0001265"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"758.91180"	"1516.81633"	"1516.81685"	"-0.34"	"-0.00026"	"8/106"	"8"	"106"	"367717.029724121"	"HCD"	"MS2"	"10.33483"	"23.8"	"100.000"	"83.2272"	"28799"	"28799"	"28775"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.6"	""	"26.3"	""	"28.1"	""	"46.1"	""	"38.7"	"50.4"	""	"953"	"66"	"36.000"	"29.000"	"1.12476787811055E-05"	""	"0"	"3.932E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATIDQNLEDLR"	"[K].aTIDQNLEDLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"758.91248"	"1516.81767"	"1516.81685"	"0.54"	"0.00041"	"9/106"	"9"	"106"	"478338.58984375"	"HCD"	"MS2"	"7.491131"	"26.7"	"100.000"	"83.2957"	"28855"	"28855"	"28835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"26.8"	""	"34.7"	""	"51.4"	""	"50.2"	"55.8"	""	"951"	"55"	"36.000"	"29.000"	"0.000160380115267292"	"27"	"0"	"8.521E-06"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSPVDIMDR"	"[R].eILSPVDIMDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"758.91522"	"1516.82317"	"1516.82425"	"-0.71"	"-0.00054"	"6/98"	"6"	"98"	"239792.945373535"	"HCD"	"MS2"	"7.438954"	"12.2"	"100.000"	"110.9956"	"39925"	"39925"	"39900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	""	"9.1"	""	"12.7"	""	"19.7"	""	"32.9"	"29.2"	""	"1022"	"31"	"37.000"	"30.000"	"0.0433931222743556"	"23"	"0.0001686"	"0.001268"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EILSPVDIMDR"	"[R].eILSPVDIMDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"P97544"	"Phospholipid phosphatase 3 OS=Rattus norvegicus OX=10116 GN=Plpp3 PE=1 SV=1"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"758.91602"	"1516.82475"	"1516.82425"	"0.34"	"0.00025"	"6/98"	"6"	"98"	"204431.020629883"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"110.8984"	"39872"	"39872"	"39847"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"10.1"	""	"7.7"	""	"15.4"	""	"26.7"	"36.8"	""	"1017"	"24"	"37.000"	"30.000"	"0.182932536926695"	"19"	"0.0001991"	"0.003748"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEQELTTLR"	"[K].aQVEQELTTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"758.93030"	"1516.85332"	"1516.85324"	"0.05"	"0.00004"	"18/108"	"18"	"108"	"448238.019714355"	"HCD"	"MS2"	"50.7666"	"28.1"	"100.000"	"83.7086"	"29022"	"29022"	"29004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.4"	""	"30.4"	""	"33.4"	""	"40.7"	"3.2"	"52.0"	"60.3"	""	"984"	"39"	"36.000"	"29.000"	"0.00592877682662925"	""	"0"	"0.0001441"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQVEQELTTLR"	"[K].aQVEQELTTLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"758.93085"	"1516.85442"	"1516.85324"	"0.78"	"0.00059"	"11/108"	"11"	"108"	"338190.577148438"	"HCD"	"MS2"	"40.7396"	"20.5"	"100.000"	"83.7300"	"29002"	"29002"	"28981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.5"	""	"17.2"	""	"29.2"	""	"33.7"	""	"34.9"	"49.4"	""	"1020"	"33"	"37.000"	"30.000"	"0.026888722932564"	"24"	"0"	"0.0002477"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.3793"	"0.0000"	"1"	"1"	"1"	"506.29166"	"1516.86042"	"1516.86229"	"-1.24"	"-0.00063"	"11/82"	"11"	"82"	"1293701.79669189"	"HCD"	"MS2"	"29.88375"	"37.1"	"100.000"	"59.4194"	"19180"	"19180"	"19161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.3"	""	"38.5"	""	"41.2"	""	"74.1"	""	"83.5"	"72.6"	""	"987"	"29"	"36.000"	"29.000"	"0.0647570650165977"	""	"0"	"0.0003714"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.5610"	"0.0000"	"1"	"1"	"1"	"758.93390"	"1516.86052"	"1516.86229"	"-1.17"	"-0.00089"	"6/82"	"6"	"82"	"368775.021362305"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"59.7046"	"19295"	"19295"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.6"	""	"30.6"	""	"28.5"	""	"68.6"	"4.0"	"59.6"	"74.8"	""	"985"	"41"	"36.000"	"29.000"	"0.00422091138775957"	""	"0"	"0.0001359"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"758.93427"	"1516.86125"	"1516.86229"	"-0.69"	"-0.00052"	"9/82"	"9"	"82"	"605262.995056152"	"HCD"	"MS2"	"6.149994"	"46.1"	"100.000"	"59.5781"	"19210"	"19210"	"19189"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.6"	""	"48.0"	""	"43.8"	"2.2"	"97.5"	""	"99.1"	"84.5"	""	"973"	"44"	"36.000"	"29.000"	"0.00193679138474276"	"27"	"0"	"1.63E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"506.29239"	"1516.86261"	"1516.86229"	"0.21"	"0.00011"	"10/82"	"10"	"82"	"1500374.76403809"	"HCD"	"MS2"	"33.82093"	"45.7"	"100.000"	"59.6427"	"19236"	"19236"	"19221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"49.7"	""	"52.6"	""	"89.8"	"1.9"	"92.9"	"90.2"	""	"958"	"38"	"36.000"	"29.000"	"0.00745307537538831"	""	"0"	"0.0001722"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVDEVSPEK"	"[K].vGVDEVSPEk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"758.93500"	"1516.86272"	"1516.86229"	"0.28"	"0.00021"	"13/82"	"13"	"82"	"519253.774658203"	"HCD"	"MS2"	"5.811214"	"38.6"	"100.000"	"59.3869"	"19167"	"19167"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.9"	""	"43.6"	""	"34.7"	""	"81.9"	""	"88.4"	"67.0"	""	"958"	"43"	"36.000"	"29.000"	"0.00234064480125217"	"27"	"0"	"7.067E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYLSADTFK"	"[R].dYLSADTFk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"759.41541"	"1517.82353"	"1517.82518"	"-1.09"	"-0.00082"	"11/76"	"11"	"76"	"244158.456726074"	"HCD"	"MS2"	"31.33452"	"24.2"	"100.000"	"94.7078"	"33421"	"33421"	"33402"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"30.6"	""	"34.5"	""	"40.3"	""	"37.1"	"49.1"	""	"1018"	"32"	"37.000"	"30.000"	"0.029425088812951"	"21"	"9.9E-05"	"0.0008263"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"759.43170"	"1517.85613"	"1517.85754"	"-0.93"	"-0.00071"	"17/86"	"17"	"86"	"849058.988464355"	"HCD"	"MS2"	"22.40892"	"56.7"	"100.000"	"47.8577"	"14448"	"14448"	"14422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.5"	""	"60.5"	""	"81.4"	""	"104.0"	"1.1"	"93.9"	"102.4"	""	"1053"	"53"	"37.000"	"30.000"	"0.000276311127821505"	"27"	"0"	"9.288E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"759.43225"	"1517.85723"	"1517.85754"	"-0.21"	"-0.00016"	"9/86"	"9"	"86"	"901286.88659668"	"HCD"	"MS2"	"15.1739"	"61.4"	"100.000"	"47.5401"	"14356"	"14356"	"14335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.6"	""	"69.6"	""	"88.4"	""	"97.8"	"0.0"	"99.3"	"132.3"	""	"1029"	"49"	"37.000"	"30.000"	"0.000684518798049728"	"24"	"0"	"3.387E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"759.43231"	"1517.85735"	"1517.85754"	"-0.13"	"-0.00010"	"17/86"	"17"	"86"	"2725832.55731201"	"HCD"	"MS2"	"0"	"184.5"	"100.000"	"47.8304"	"14475"	"14475"	"14458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"305.2"	""	"197.7"	""	"261.3"	""	"308.0"	""	"289.3"	"388.4"	""	"1029"	"52"	"37.000"	"30.000"	"0.000339144969103203"	"25"	"0"	"2.958E-06"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDTELAAPK"	"[K].aGSDTELAAPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"759.43243"	"1517.85759"	"1517.85754"	"0.03"	"0.00002"	"17/86"	"17"	"86"	"2452959.48828125"	"HCD"	"MS2"	"0"	"165.5"	"100.000"	"48.1667"	"14574"	"14574"	"14557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.9"	""	"181.4"	""	"259.1"	""	"246.9"	""	"263.2"	"354.2"	""	"1029"	"54"	"37.000"	"30.000"	"0.000228236647302722"	"26"	"0"	"1.055E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.7568"	"0.0000"	"1"	"1"	"1"	"759.44421"	"1517.88115"	"1517.88270"	"-1.02"	"-0.00077"	"7/78"	"7"	"78"	"3804103.44689941"	"HCD"	"MS2"	"17.85838"	"233.1"	"100.000"	"89.8765"	"31510"	"31510"	"31497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"461.6"	""	"308.4"	""	"292.5"	""	"274.6"	""	"469.9"	"404.5"	""	"938"	"37"	"36.000"	"29.000"	"0.00883431422970716"	"24"	"0.0001991"	"0.004607"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.4500"	"0.0000"	"1"	"1"	"1"	"506.63193"	"1517.88123"	"1517.88270"	"-0.97"	"-0.00049"	"7/78"	"7"	"78"	"620947.884216309"	"HCD"	"MS2"	"31.96257"	"22.4"	"100.000"	"89.5188"	"31366"	"31366"	"31347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"34.4"	""	"30.5"	""	"30.1"	""	"38.4"	"37.9"	""	"936"	"20"	"36.000"	"29.000"	"0.523896929462626"	"25"	"0.00455"	"0.05343"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"759.44446"	"1517.88164"	"1517.88270"	"-0.70"	"-0.00053"	"7/78"	"7"	"78"	"4002745.54394531"	"HCD"	"MS2"	"19.4893"	"248.3"	"100.000"	"90.0136"	"31525"	"31525"	"31507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"468.1"	""	"343.4"	""	"312.9"	""	"267.8"	"1.3"	"521.8"	"438.1"	""	"936"	"34"	"36.000"	"29.000"	"0.0182073127857323"	"23"	"0.0001991"	"0.005329"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"506.63211"	"1517.88178"	"1517.88270"	"-0.60"	"-0.00031"	"8/78"	"8"	"78"	"904689.636413574"	"HCD"	"MS2"	"32.0705"	"27.1"	"100.000"	"89.6882"	"31394"	"31394"	"31378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"41.9"	""	"26.2"	""	"36.0"	"2.3"	"52.4"	"47.3"	""	"936"	"23"	"36.000"	"29.000"	"0.232405206438757"	"26"	"0.004234"	"0.04822"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.5676"	"0.0000"	"1"	"1"	"1"	"506.63223"	"1517.88214"	"1517.88270"	"-0.36"	"-0.00018"	"10/78"	"10"	"78"	"2487483.86889648"	"HCD"	"MS2"	"19.70985"	"66.5"	"100.000"	"89.9793"	"31511"	"31511"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.8"	""	"96.7"	""	"74.9"	""	"75.4"	""	"144.3"	"117.1"	""	"934"	"37"	"36.000"	"29.000"	"0.00859640524686003"	""	"0.0001991"	"0.00526"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"759.44476"	"1517.88225"	"1517.88270"	"-0.29"	"-0.00022"	"8/78"	"8"	"78"	"3134104.12457275"	"HCD"	"MS2"	"27.44088"	"203.1"	"100.000"	"90.1669"	"31626"	"31626"	"31609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"374.9"	""	"273.1"	""	"261.0"	""	"229.5"	""	"402.6"	"384.0"	""	"949"	"35"	"36.000"	"29.000"	"0.0164905908604801"	"27"	"0.0001991"	"0.003739"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"506.63239"	"1517.88260"	"1517.88270"	"-0.06"	"-0.00003"	"10/78"	"10"	"78"	"2491547.94104004"	"HCD"	"MS2"	"17.91323"	"63.4"	"100.000"	"89.8533"	"31500"	"31500"	"31483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.8"	""	"86.6"	""	"85.9"	""	"84.6"	""	"129.1"	"119.5"	""	"949"	"31"	"36.000"	"29.000"	"0.0415179801345418"	"29"	"9.9E-05"	"0.0006191"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"759.44495"	"1517.88262"	"1517.88270"	"-0.05"	"-0.00004"	"6/78"	"6"	"78"	"1362875.59765625"	"HCD"	"MS2"	"5.538182"	"95.2"	"100.000"	"89.7275"	"31409"	"31409"	"31397"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.0"	""	"133.1"	""	"116.8"	""	"109.1"	""	"195.1"	"173.1"	""	"949"	"40"	"36.000"	"29.000"	"0.00479994451046321"	"19"	"0"	"0.0001982"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"759.44495"	"1517.88262"	"1517.88270"	"-0.05"	"-0.00004"	"7/78"	"7"	"78"	"2688624.43847656"	"HCD"	"MS2"	"26.14741"	"167.8"	"100.000"	"90.3085"	"31644"	"31644"	"31632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"321.2"	""	"207.8"	""	"214.3"	""	"194.4"	""	"347.1"	"307.0"	""	"949"	"35"	"36.000"	"29.000"	"0.016301824627849"	"29"	"0.0001991"	"0.005152"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"GLGLDESGLAK"	"[K].gLGLDESGLAk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"0"	"1"	""	""	"P60123"	"RuvB-like 1 OS=Rattus norvegicus OX=10116 GN=Ruvbl1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"759.44501"	"1517.88274"	"1517.89393"	"-7.37"	"-0.00560"	"9/84"	"9"	"84"	"465865.558166504"	"HCD"	"MS2"	"13.999"	"35.6"	"100.000"	"90.4850"	"31753"	"31753"	"31733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.1"	""	"45.5"	""	"42.5"	""	"44.5"	"0.3"	"75.6"	"69.9"	""	"949"	"29"	"36.000"	"29.000"	"0.0554927461038929"	"24"	"0.0001991"	"0.004798"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"759.44501"	"1517.88274"	"1517.88270"	"0.03"	"0.00002"	"12/78"	"12"	"78"	"465865.558166504"	"HCD"	"MS2"	"13.999"	"35.6"	"100.000"	"90.4850"	"31753"	"31753"	"31733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.1"	""	"45.5"	""	"42.5"	""	"44.5"	"0.3"	"75.6"	"69.9"	""	"949"	"29"	"36.000"	"29.000"	"0.0637141974059916"	"24"	"0.001615"	"0.01347"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"759.44562"	"1517.88396"	"1517.88270"	"0.83"	"0.00063"	"6/78"	"6"	"78"	"324220.27154541"	"HCD"	"MS2"	"23.56006"	"26.6"	"100.000"	"90.6198"	"31769"	"31769"	"31747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.9"	""	"41.5"	""	"34.5"	""	"30.3"	""	"50.5"	"50.7"	""	"913"	"24"	"36.000"	"29.000"	"0.16460415053938"	"27"	"0.00452"	"0.05243"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEILTEK"	"[K].tPEEILTEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"759.44574"	"1517.88420"	"1517.88270"	"0.99"	"0.00075"	"7/78"	"7"	"78"	"1035324.44641113"	"HCD"	"MS2"	"6.572905"	"69.6"	"100.000"	"89.5763"	"31389"	"31389"	"31373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.6"	""	"90.4"	""	"80.0"	""	"82.0"	""	"150.3"	"119.1"	""	"910"	"54"	"36.000"	"29.000"	"0.000184082030722337"	"25"	"9.9E-05"	"0.0004543"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVNLLGDEK"	"[K].aTVNLLGDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"759.44946"	"1517.89165"	"1517.89393"	"-1.50"	"-0.00114"	"8/98"	"8"	"98"	"330138.897277832"	"HCD"	"MS2"	"17.58437"	"29.3"	"100.000"	"84.0244"	"29150"	"29150"	"29130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"30.8"	""	"37.4"	""	"58.3"	""	"56.4"	"67.1"	""	"908"	"53"	"36.000"	"29.000"	"0.000230173781556716"	"19"	"0"	"1.296E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTQLALEEK"	"[R].qTQLALEEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.5227"	"0.0000"	"1"	"1"	"1"	"759.44977"	"1517.89226"	"1517.89393"	"-1.10"	"-0.00083"	"7/92"	"7"	"92"	"378573.162109375"	"HCD"	"MS2"	"8.956289"	"40.6"	"100.000"	"60.1884"	"19458"	"19458"	"19435"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"26.0"	""	"30.2"	""	"97.7"	"2.2"	"98.2"	"97.3"	""	"914"	"44"	"36.000"	"29.000"	"0.00175354211189972"	""	"0"	"0.0001314"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVNLLGDEK"	"[K].aTVNLLGDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"759.45026"	"1517.89324"	"1517.89393"	"-0.46"	"-0.00035"	"16/98"	"16"	"98"	"399903.717224121"	"HCD"	"MS2"	"6.991877"	"32.7"	"100.000"	"84.2883"	"29228"	"29228"	"29209"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"31.5"	""	"31.3"	""	"72.9"	""	"69.9"	"71.8"	""	"885"	"55"	"36.000"	"29.000"	"0.000135804222986309"	"21"	"0"	"3.425E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVNLLGDEK"	"[K].aTVNLLGDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"759.45032"	"1517.89336"	"1517.89393"	"-0.38"	"-0.00029"	"8/98"	"8"	"98"	"353159.565307617"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"84.3249"	"29271"	"29271"	"29251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"27.8"	""	"39.1"	""	"60.6"	""	"68.5"	"56.3"	""	"885"	"59"	"36.000"	"29.000"	"6.19317390238384E-05"	"24"	"0"	"4.873E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTQLALEEK"	"[R].qTQLALEEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"759.45056"	"1517.89385"	"1517.89393"	"-0.05"	"-0.00004"	"7/92"	"7"	"92"	"359470.373657227"	"HCD"	"MS2"	"14.37081"	"36.1"	"100.000"	"60.0571"	"19438"	"19438"	"19413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"24.5"	""	"28.3"	""	"96.7"	"3.3"	"77.6"	"83.3"	""	"895"	"40"	"36.000"	"29.000"	"0.004475"	"28"	"0"	"0.0002815"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATVNLLGDEK"	"[K].aTVNLLGDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"B2RZ37"	"Receptor expression-enhancing protein 5 OS=Rattus norvegicus OX=10116 GN=Reep5 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"759.45117"	"1517.89507"	"1517.89393"	"0.75"	"0.00057"	"13/98"	"13"	"98"	"317314.800842285"	"HCD"	"MS2"	"33.16151"	"26.5"	"100.000"	"83.9975"	"29110"	"29110"	"29089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"25.6"	""	"35.5"	""	"52.5"	""	"51.7"	"56.0"	""	"879"	"46"	"36.000"	"29.000"	"0.00109385279138511"	"21"	"0"	"5.69E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTQLALEEK"	"[R].qTQLALEEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"759.45166"	"1517.89604"	"1517.89393"	"1.39"	"0.00106"	"16/92"	"16"	"92"	"747800.835083008"	"HCD"	"MS2"	"17.42755"	"68.7"	"100.000"	"59.7369"	"19308"	"19308"	"19288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"43.2"	""	"48.9"	""	"159.8"	""	"175.4"	"171.4"	""	"879"	"63"	"36.000"	"29.000"	"2.16749886838194E-05"	""	"0"	"1.503E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTQLALEEK"	"[R].qTQLALEEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"759.45282"	"1517.89836"	"1517.89393"	"2.92"	"0.00222"	"13/92"	"13"	"92"	"610118.712219238"	"HCD"	"MS2"	"8.737935"	"56.6"	"100.000"	"59.8728"	"19330"	"19330"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"36.5"	""	"35.7"	""	"131.4"	"0.5"	"154.5"	"139.4"	""	"855"	"41"	"36.000"	"29.000"	"0.0036892332917038"	"26"	"9.9E-05"	"0.0004038"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGVESAFHK"	"[R].eGGVESAFHk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"506.94788"	"1518.82907"	"1518.83166"	"-1.70"	"-0.00086"	"6/82"	"6"	"82"	"6529770.96679688"	"HCD"	"MS2"	"50.84795"	"169.0"	"100.000"	"47.9773"	"14534"	"14534"	"14517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.1"	""	"190.5"	""	"241.0"	""	"289.0"	""	"296.2"	"346.0"	""	"1044"	"33"	"37.000"	"30.000"	"0.0249270280849314"	"24"	"0"	"7.078E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGVESAFHK"	"[R].eGGVESAFHk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"506.94809"	"1518.82972"	"1518.83166"	"-1.28"	"-0.00065"	"8/82"	"8"	"82"	"8208149.99035645"	"HCD"	"MS2"	"74.55462"	"192.7"	"91.748"	"48.2493"	"14607"	"14607"	"14589"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"293.0"	""	"222.1"	""	"246.2"	""	"354.0"	""	"335.7"	"376.2"	""	"1042"	"39"	"37.000"	"30.000"	"0.00626379770435672"	"25"	"0"	"5.051E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESLGQSELASR"	"[R].lESLGQSELASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIC4"	"Maspardin OS=Rattus norvegicus OX=10116 GN=Spg21 PE=2 SV=1"	"Q5XIC4"	"Maspardin OS=Rattus norvegicus OX=10116 GN=Spg21 PE=2 SV=1"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"3"	"759.91901"	"1518.83074"	"1518.83250"	"-1.16"	"-0.00088"	"4/118"	"4"	"118"	"178928.423034668"	"HCD"	"MS2"	"19.39053"	"16.6"	"100.000"	"77.8126"	"26604"	"26604"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"19.6"	""	"21.0"	""	"27.9"	""	"30.2"	"34.2"	""	"1037"	"11"	"37.000"	"30.000"	"4.47454377017174"	"21"	"0.004792"	"0.0568"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESLGQSELASR"	"[R].lESLGQSELASR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIC4"	"Maspardin OS=Rattus norvegicus OX=10116 GN=Spg21 PE=2 SV=1"	"Q5XIC4"	"Maspardin OS=Rattus norvegicus OX=10116 GN=Spg21 PE=2 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"759.92041"	"1518.83354"	"1518.83250"	"0.69"	"0.00052"	"8/118"	"8"	"118"	"143399.700195313"	"HCD"	"MS2"	"15.62198"	"12.8"	"100.000"	"77.9714"	"26696"	"26696"	"26670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"19.1"	""	"18.0"	""	"18.4"	"1.2"	"25.8"	"21.2"	""	"1061"	"45"	"37.000"	"30.000"	"0.00178519387553698"	"23"	"9.9E-05"	"0.0005129"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"759.92365"	"1518.84001"	"1518.84156"	"-1.02"	"-0.00077"	"8/82"	"8"	"82"	"448997.715698242"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"56.8148"	"18119"	"18119"	"18101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.9"	""	"50.2"	""	"54.1"	""	"45.9"	""	"57.8"	"69.6"	""	"1057"	"42"	"37.000"	"30.000"	"0.00319186850625417"	"22"	"0"	"0.0003473"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"759.92389"	"1518.84050"	"1518.84156"	"-0.70"	"-0.00053"	"8/82"	"8"	"82"	"432569.969909668"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"57.0843"	"18194"	"18194"	"18170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.8"	""	"57.5"	""	"46.5"	""	"45.0"	"2.0"	"62.5"	"55.4"	""	"1039"	"60"	"37.000"	"30.000"	"5.15923787154675E-05"	"29"	"0"	"5.785E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"759.92413"	"1518.84099"	"1518.84156"	"-0.37"	"-0.00028"	"8/82"	"8"	"82"	"1159019.91833496"	"HCD"	"MS2"	"0"	"85.5"	"100.000"	"57.4101"	"18361"	"18361"	"18341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.2"	""	"123.8"	""	"129.8"	""	"107.1"	""	"137.4"	"167.8"	""	"1038"	"54"	"37.000"	"30.000"	"0.000195959967090291"	"26"	"0"	"7.829E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"759.92413"	"1518.84099"	"1518.84156"	"-0.37"	"-0.00028"	"8/82"	"8"	"82"	"1674647.88848877"	"HCD"	"MS2"	"0"	"116.5"	"100.000"	"57.3875"	"18316"	"18316"	"18300"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.4"	""	"156.9"	""	"173.3"	""	"147.7"	""	"178.5"	"234.5"	""	"1038"	"58"	"37.000"	"30.000"	"7.676572534593E-05"	"27"	"9.9E-05"	"0.0004259"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8103"	"0.0000"	"1"	"1"	"1"	"759.92419"	"1518.84111"	"1518.84156"	"-0.29"	"-0.00022"	"8/82"	"8"	"82"	"748057.881164551"	"HCD"	"MS2"	"0"	"57.6"	"100.000"	"57.7714"	"18473"	"18473"	"18455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.7"	""	"83.2"	""	"78.1"	""	"70.7"	""	"92.6"	"130.5"	""	"1051"	"58"	"37.000"	"30.000"	"8.60147082010313E-05"	"27"	"0"	"0.0002293"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLADPSDDTK"	"[R].vLADPSDDTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"759.92450"	"1518.84172"	"1518.84156"	"0.11"	"0.00008"	"9/82"	"9"	"82"	"1699852.92895508"	"HCD"	"MS2"	"0"	"118.9"	"100.000"	"57.1042"	"18236"	"18236"	"18216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.4"	""	"159.9"	""	"182.5"	""	"137.2"	""	"191.1"	"253.3"	""	"1044"	"44"	"37.000"	"30.000"	"0.00222162371655814"	"26"	"0"	"1.115E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"759.92938"	"1518.85149"	"1518.85279"	"-0.86"	"-0.00065"	"8/90"	"8"	"90"	"662177.18927002"	"HCD"	"MS2"	"0"	"60.3"	"100.000"	"48.6791"	"14818"	"14818"	"14801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.3"	""	"84.9"	""	"71.3"	""	"89.2"	""	"104.2"	"127.5"	""	"1057"	"54"	"37.000"	"30.000"	"0.00021137080024874"	"28"	"0"	"6.355E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7018"	"0.0000"	"1"	"1"	"1"	"759.92938"	"1518.85149"	"1518.85279"	"-0.86"	"-0.00065"	"8/90"	"8"	"90"	"2196528.02941895"	"HCD"	"MS2"	"0"	"184.5"	"100.000"	"48.9681"	"14934"	"14934"	"14915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"300.9"	""	"238.2"	""	"212.0"	""	"243.9"	""	"358.8"	"398.6"	""	"1057"	"57"	"37.000"	"30.000"	"0.000109406970283607"	""	"0"	"0.0001044"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"506.95541"	"1518.85169"	"1518.85279"	"-0.73"	"-0.00037"	"9/90"	"9"	"90"	"3099125.0211792"	"HCD"	"MS2"	"12.29619"	"106.4"	"100.000"	"48.8075"	"14869"	"14869"	"14850"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.0"	""	"144.8"	""	"133.0"	""	"153.0"	""	"205.2"	"212.1"	""	"1009"	"33"	"37.000"	"30.000"	"0.0252267422895886"	"24"	"0.0001991"	"0.003627"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"759.92969"	"1518.85210"	"1518.85279"	"-0.46"	"-0.00035"	"6/90"	"6"	"90"	"174163.15435791"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"49.2830"	"15062"	"15062"	"15035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"23.5"	""	"23.4"	""	"17.7"	""	"34.6"	"32.8"	""	"1009"	"26"	"37.000"	"30.000"	"0.133309521806892"	"23"	"0.001999"	"0.0175"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7018"	"0.0000"	"1"	"1"	"1"	"759.92975"	"1518.85222"	"1518.85279"	"-0.38"	"-0.00029"	"8/90"	"8"	"90"	"2106894.96270752"	"HCD"	"MS2"	"0"	"181.0"	"100.000"	"49.3122"	"15039"	"15039"	"15026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"306.3"	""	"233.6"	""	"222.7"	""	"232.9"	""	"336.1"	"386.6"	""	"1011"	"57"	"37.000"	"30.000"	"0.000105857384643263"	""	"0"	"0.0001071"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"759.92981"	"1518.85234"	"1518.85279"	"-0.30"	"-0.00023"	"8/90"	"8"	"90"	"583850.928283691"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"49.0138"	"14918"	"14918"	"14903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"102.4"	""	"77.5"	""	"73.7"	""	"79.8"	""	"103.1"	"111.7"	""	"1019"	"54"	"37.000"	"30.000"	"0.000209480782902754"	"26"	"0"	"9.285E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGENADSQIK"	"[K].vGENADSQIk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"P43278"	"Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1f0 PE=2 SV=2"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"759.93005"	"1518.85283"	"1518.85279"	"0.03"	"0.00002"	"9/92"	"9"	"92"	"412905.391174316"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"43.2839"	"12628"	"12628"	"12603"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.7"	""	"53.2"	""	"72.2"	""	"48.5"	"1.4"	"71.9"	"52.5"	""	"1019"	"48"	"37.000"	"30.000"	"0.000822515684703095"	"21"	"0"	"4.761E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVDQLTNDK"	"[R].qVDQLTNDk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"506.95584"	"1518.85297"	"1518.85279"	"0.12"	"0.00006"	"6/90"	"6"	"90"	"4434839.92419434"	"HCD"	"MS2"	"18.68214"	"170.1"	"100.000"	"49.2617"	"15019"	"15019"	"14998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"272.5"	""	"240.9"	""	"219.5"	""	"222.3"	""	"309.3"	"352.2"	""	"987"	"23"	"36.000"	"29.000"	"0.256027819211442"	"22"	"0.0001991"	"0.003843"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVVDEIASK"	"[K].aEVVDEIASk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"759.94299"	"1518.87871"	"1518.87794"	"0.50"	"0.00038"	"10/86"	"10"	"86"	"115828.863525391"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"89.2274"	"31250"	"31250"	"31228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.0"	""	"11.5"	""	"11.0"	""	"20.3"	""	"23.9"	"23.1"	""	"1020"	"36"	"37.000"	"30.000"	"0.0120661904571774"	"22"	"0.0005161"	"0.00668"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVVDEIASK"	"[K].aEVVDEIASk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.94336"	"1518.87944"	"1518.87794"	"0.99"	"0.00075"	"4/86"	"4"	"86"	"119491.025634766"	"HCD"	"MS2"	"15.82492"	"12.6"	"100.000"	"89.3462"	"31258"	"31258"	"31235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"14.3"	""	"12.6"	""	"22.3"	"1.3"	"26.0"	"26.0"	""	"1034"	"11"	"37.000"	"30.000"	"4.16380654099918"	"13"	"0.005549"	"0.07021"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLLEGEESR"	"[R].kLLEGEESR.[IL]"	"N-Term(TMT6plex); K1(TMT6plex)"	"4"	"5"	"P48675; P31000; Q6IG12; Q10758"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2;Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2;Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1;Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"P21807; P48675; P31000; Q6IG12; Q10758"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2; Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"1"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"759.94727"	"1518.88725"	"1518.88918"	"-1.27"	"-0.00096"	"6/88"	"6"	"88"	"591324.029602051"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"38.8729"	"10807"	"10807"	"10781"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.1"	""	"45.2"	""	"53.6"	""	"56.2"	""	"57.9"	"62.4"	""	"991"	"34"	"36.000"	"29.000"	"0.0179491405715474"	"21"	"0.007681"	"0.09768"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYASYEFVQR"	"[R].qYASYEFVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"760.38916"	"1519.77104"	"1519.77426"	"-2.12"	"-0.00161"	"7/94"	"7"	"94"	"273214.707641602"	"HCD"	"MS2"	"34.1132"	"20.9"	"100.000"	"67.7272"	"22547"	"22547"	"22525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"24.2"	""	"24.7"	""	"30.3"	"0.9"	"49.5"	"39.2"	""	"729"	"32"	"35.000"	"28.000"	"0.0243051067378365"	"21"	"0"	"0.0003024"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYASYEFVQR"	"[R].qYASYEFVQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.39130"	"1519.77532"	"1519.77426"	"0.70"	"0.00053"	"6/94"	"6"	"94"	"256688.043640137"	"HCD"	"MS2"	"44.72461"	"17.6"	"100.000"	"67.6084"	"22468"	"22468"	"22441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.1"	""	"20.0"	""	"22.8"	""	"34.8"	""	"33.7"	"36.7"	""	"752"	"17"	"35.000"	"28.000"	"0.733141569509025"	"14"	"0.002559"	"0.02537"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMDSLGPEWR"	"[R].aLmDSLGPEWR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"760.39209"	"1519.77690"	"1519.77763"	"-0.48"	"-0.00036"	"8/90"	"8"	"90"	"170584.546203613"	"HCD"	"MS2"	"27.26973"	"13.2"	"100.000"	"92.2096"	"32414"	"32414"	"32391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.0"	""	"14.8"	""	"17.3"	""	"27.4"	""	"28.2"	"23.0"	""	"784"	"30"	"35.000"	"28.000"	"0.0421003849637768"	"15"	"0.002328"	"0.02198"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALMDSLGPEWR"	"[R].aLmDSLGPEWR.[L]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"Q3KRD5"	"Mitochondrial import receptor subunit TOM34 OS=Rattus norvegicus OX=10116 GN=Tomm34 PE=1 SV=1"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"760.39240"	"1519.77751"	"1519.77763"	"-0.08"	"-0.00006"	"12/90"	"12"	"90"	"243412.195800781"	"HCD"	"MS2"	"14.85754"	"19.5"	"100.000"	"91.2799"	"32036"	"32036"	"32010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"20.9"	""	"31.7"	""	"36.5"	""	"34.8"	"37.0"	""	"785"	"15"	"35.000"	"28.000"	"1.25267860812705"	"21"	"0.007522"	"0.09626"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"760.41125"	"1519.81523"	"1519.81652"	"-0.85"	"-0.00064"	"11/104"	"11"	"104"	"247397.865966797"	"HCD"	"MS2"	"7.365241"	"17.9"	"100.000"	"97.0683"	"34378"	"34378"	"34361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"23.2"	""	"29.8"	""	"33.3"	"2.3"	"33.4"	"28.7"	""	"980"	"18"	"36.000"	"29.000"	"0.738237462431504"	"23"	"0.002189"	"0.02133"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"760.41144"	"1519.81560"	"1519.81652"	"-0.60"	"-0.00046"	"15/104"	"15"	"104"	"386394.168273926"	"HCD"	"MS2"	"50.97647"	"23.5"	"100.000"	"96.5116"	"34184"	"34184"	"34162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"29.6"	""	"31.9"	""	"38.9"	""	"43.2"	"47.6"	""	"974"	"49"	"36.000"	"29.000"	"0.000548945161157474"	"24"	"0"	"7.73E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"507.27673"	"1519.81565"	"1519.81652"	"-0.57"	"-0.00029"	"14/104"	"14"	"104"	"1366684.95849609"	"HCD"	"MS2"	"38.90748"	"18.7"	"100.000"	"96.7241"	"34238"	"34238"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"21.4"	""	"23.0"	""	"35.2"	""	"35.1"	"37.0"	""	"974"	"38"	"36.000"	"29.000"	"0.00764766685710441"	"26"	"0"	"7.493E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"760.41162"	"1519.81597"	"1519.81652"	"-0.36"	"-0.00028"	"9/104"	"9"	"104"	"418456.939697266"	"HCD"	"MS2"	"43.34754"	"23.2"	"100.000"	"96.4517"	"34128"	"34128"	"34110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"26.9"	""	"32.9"	""	"40.3"	"1.0"	"42.9"	"45.7"	""	"1003"	"51"	"37.000"	"30.000"	"0.000398355609714227"	"24"	"0"	"5.407E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.7397"	"0.0000"	"1"	"1"	"1"	"760.41168"	"1519.81609"	"1519.81652"	"-0.28"	"-0.00021"	"10/104"	"10"	"104"	"2880908.5489502"	"HCD"	"MS2"	"0"	"124.2"	"100.000"	"96.7566"	"34252"	"34252"	"34235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.1"	""	"174.7"	""	"166.8"	""	"196.6"	""	"230.5"	"239.9"	""	"1021"	"73"	"37.000"	"30.000"	"2.85756255563254E-06"	""	"0"	"3.096E-07"	"1.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESSADILTEIGR"	"[R].eSSADILTEIGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"Q6AYQ4"	"Transmembrane protein 109 OS=Rattus norvegicus OX=10116 GN=Tmem109 PE=2 SV=1"	"0"	"2"	"2"	"0.8243"	"0.0000"	"1"	"1"	"1"	"760.41174"	"1519.81621"	"1519.81652"	"-0.20"	"-0.00015"	"10/104"	"10"	"104"	"2410377.70495605"	"HCD"	"MS2"	"0"	"103.6"	"100.000"	"96.8261"	"34311"	"34311"	"34295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"155.1"	""	"151.2"	""	"148.0"	""	"151.2"	""	"175.9"	"202.7"	""	"1021"	"74"	"37.000"	"30.000"	"1.88797285777826E-06"	"30"	"0"	"1.391E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEPSALPSTYR"	"[K].lGEPSALPSTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"760.41882"	"1519.83037"	"1519.83177"	"-0.92"	"-0.00070"	"4/102"	"4"	"102"	"169723.672424316"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"75.2588"	"25603"	"25603"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"13.5"	""	"16.6"	""	"14.9"	""	"26.3"	"22.1"	""	"1052"	"16"	"37.000"	"30.000"	"1.25021799076469"	"20"	"0.006958"	"0.0874"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEPSALPSTYR"	"[K].lGEPSALPSTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"760.41901"	"1519.83074"	"1519.83177"	"-0.68"	"-0.00052"	"4/102"	"4"	"102"	"158019.033813477"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"75.4997"	"25670"	"25670"	"25647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"12.0"	""	"15.7"	""	"16.2"	""	"25.7"	"15.7"	""	"1035"	"16"	"37.000"	"30.000"	"1.16656879228888"	"16"	"0.002189"	"0.02072"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEPSALPSTYR"	"[K].lGEPSALPSTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"760.41913"	"1519.83098"	"1519.83177"	"-0.52"	"-0.00040"	"6/102"	"6"	"102"	"194047.286804199"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"75.5840"	"25735"	"25735"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"17.0"	""	"19.7"	""	"18.2"	""	"36.7"	"26.4"	""	"1031"	"20"	"37.000"	"30.000"	"0.526294303851309"	"16"	"0.002189"	"0.02035"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEPSALPSTYR"	"[K].lGEPSALPSTYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.41956"	"1519.83183"	"1519.83177"	"0.04"	"0.00003"	"7/102"	"7"	"102"	"212890.461242676"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"75.1656"	"25534"	"25534"	"25505"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"14.4"	""	"19.4"	""	"18.6"	""	"26.8"	"27.5"	""	"1045"	"17"	"37.000"	"30.000"	"0.993313401259924"	"14"	"0.0001686"	"0.001486"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVTDDLEK"	"[R].lEVTDDLEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"760.43469"	"1519.86211"	"1519.86196"	"0.10"	"0.00007"	"6/76"	"6"	"76"	"279390.900817871"	"HCD"	"MS2"	"44.67846"	"25.1"	"100.000"	"91.3900"	"32117"	"32117"	"32099"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"23.2"	""	"27.3"	""	"43.7"	""	"48.8"	"54.3"	""	"1051"	"23"	"37.000"	"30.000"	"0.246929354072041"	"22"	"0.005956"	"0.07272"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEVTDDLEK"	"[R].lEVTDDLEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"760.43518"	"1519.86308"	"1519.86196"	"0.74"	"0.00056"	"6/76"	"6"	"76"	"330622.705078125"	"HCD"	"MS2"	"46.22675"	"28.1"	"100.000"	"91.4669"	"32112"	"32112"	"32089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.5"	""	"31.9"	""	"37.3"	""	"49.2"	""	"47.6"	"61.3"	""	"1019"	"23"	"37.000"	"30.000"	"0.24274158777736"	"22"	"0.003043"	"0.03288"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIISAEGDSK"	"[K].aAIISAEGDSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"760.43939"	"1519.87151"	"1519.87319"	"-1.11"	"-0.00084"	"12/90"	"12"	"90"	"289289.006835938"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"58.1810"	"18641"	"18641"	"18610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"34.8"	""	"36.4"	""	"36.4"	""	"38.2"	"56.3"	""	"921"	"42"	"36.000"	"29.000"	"0.00276203790615662"	"20"	"9.9E-05"	"0.0005003"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4912"	"0.0000"	"1"	"1"	"1"	"760.43958"	"1519.87187"	"1519.87319"	"-0.87"	"-0.00066"	"16/98"	"16"	"98"	"582746.266479492"	"HCD"	"MS2"	"0"	"51.9"	"100.000"	"51.7188"	"16016"	"16016"	"15994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.5"	""	"73.5"	""	"81.5"	""	"58.5"	"0.2"	"91.4"	"110.5"	""	"913"	"57"	"36.000"	"29.000"	"9.29909708472661E-05"	""	"0"	"1.093E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.3396"	"0.0000"	"1"	"1"	"1"	"760.43994"	"1519.87261"	"1519.87319"	"-0.39"	"-0.00029"	"8/98"	"8"	"98"	"481435.713867188"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"51.3618"	"15905"	"15905"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"62.3"	""	"62.7"	""	"56.2"	""	"71.7"	"92.4"	""	"891"	"53"	"36.000"	"29.000"	"0.000205044303530494"	""	"0"	"7.783E-06"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6200"	"0.0000"	"1"	"1"	"1"	"760.44006"	"1519.87285"	"1519.87319"	"-0.23"	"-0.00017"	"9/98"	"9"	"98"	"438629.657043457"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"51.7020"	"16043"	"16043"	"16015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"50.8"	""	"54.7"	""	"59.3"	""	"72.8"	"73.3"	""	"939"	"50"	"36.000"	"29.000"	"0.000437155147532146"	""	"0"	"1.328E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQGAEEVLK"	"[R].sTQGAEEVLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"760.44031"	"1519.87334"	"1519.87319"	"0.10"	"0.00007"	"9/98"	"9"	"98"	"529573.736877441"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"52.0304"	"16142"	"16142"	"16116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.2"	""	"52.3"	""	"63.4"	""	"61.3"	""	"87.5"	"90.2"	""	"937"	"52"	"36.000"	"29.000"	"0.000294245341104039"	""	"0"	"6.381E-06"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAIISAEGDSK"	"[K].aAIISAEGDSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"760.44086"	"1519.87444"	"1519.87319"	"0.82"	"0.00062"	"10/90"	"10"	"90"	"210165.923522949"	"HCD"	"MS2"	"100"	"18.3"	"100.000"	"57.8495"	"18541"	"18541"	"18514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"22.1"	""	"26.2"	""	"37.3"	""	"34.5"	"29.2"	""	"939"	"32"	"36.000"	"29.000"	"0.0320358016899514"	"21"	"0.0001686"	"0.001585"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSIYDGPEQR"	"[R].nLSIYDGPEQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"760.89856"	"1520.78984"	"1520.79064"	"-0.52"	"-0.00040"	"8/112"	"8"	"112"	"346908.042541504"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"63.2380"	"20727"	"20727"	"20702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"23.0"	""	"32.3"	""	"26.1"	""	"43.0"	"40.6"	""	"894"	"29"	"36.000"	"29.000"	"0.0558865786507321"	"18"	"9.9E-05"	"0.0008604"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLSIYDGPEQR"	"[R].nLSIYDGPEQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"Q6UPE1"	"Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfdh PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"760.90027"	"1520.79326"	"1520.79064"	"1.72"	"0.00131"	"7/112"	"7"	"112"	"429131.865539551"	"HCD"	"MS2"	"0"	"26.4"	"100.000"	"63.3085"	"20724"	"20724"	"20699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.8"	""	"36.7"	""	"44.9"	""	"39.7"	""	"49.3"	"44.2"	""	"918"	"19"	"36.000"	"29.000"	"0.541767171764143"	"16"	"0.0001991"	"0.00233"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPDHVVYAR"	"[K].sFTPDHVVYAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.60602"	"1520.80350"	"1520.80589"	"-1.57"	"-0.00080"	"10/88"	"10"	"88"	"2289507.3661499"	"HCD"	"MS2"	"32.78911"	"55.5"	"100.000"	"51.4657"	"15947"	"15947"	"15923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.2"	""	"58.3"	""	"62.1"	""	"114.9"	"2.6"	"130.1"	"110.4"	""	"1013"	"20"	"37.000"	"30.000"	"0.550274578362043"	"14"	"0.0007633"	"0.007246"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPDHVVYAR"	"[K].sFTPDHVVYAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.60632"	"1520.80442"	"1520.80589"	"-0.97"	"-0.00049"	"12/88"	"12"	"88"	"11760575.6270142"	"HCD"	"MS2"	"3.937462"	"140.9"	"99.986"	"51.7486"	"16061"	"16061"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.2"	""	"178.8"	""	"146.3"	""	"386.1"	"0.3"	"295.2"	"208.6"	""	"1005"	"51"	"37.000"	"30.000"	"0.000358208647638576"	"16"	"0"	"9.133E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPDHVVYAR"	"[K].sFTPDHVVYAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.60641"	"1520.80469"	"1520.80589"	"-0.79"	"-0.00040"	"8/88"	"8"	"88"	"11673676.3435059"	"HCD"	"MS2"	"1.770444"	"136.0"	"93.509"	"52.0879"	"16165"	"16165"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.9"	""	"170.1"	""	"135.7"	""	"385.6"	"2.2"	"281.5"	"182.2"	""	"1007"	"48"	"37.000"	"30.000"	"0.000772679650839444"	"16"	"0"	"1.862E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQQSMAVGSLGAR"	"[R].sQQSMAVGSLGAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"760.90613"	"1520.80498"	"1520.80524"	"-0.17"	"-0.00013"	"10/134"	"10"	"134"	"374811.778503418"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"45.5894"	"13532"	"13532"	"13509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.2"	""	"47.8"	""	"39.4"	""	"32.2"	"1.5"	"43.3"	"45.3"	""	"1004"	"52"	"37.000"	"30.000"	"0.000326365104552232"	""	"0"	"2.876E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQQSMAVGSLGAR"	"[R].sQQSMAVGSLGAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"Q641Z2"	"Tyrosine-protein phosphatase non-receptor type 9 OS=Rattus norvegicus OX=10116 GN=Ptpn9 PE=2 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"760.90631"	"1520.80535"	"1520.80524"	"0.07"	"0.00005"	"8/134"	"8"	"134"	"449655.392578125"	"HCD"	"MS2"	"15.68631"	"32.2"	"100.000"	"45.3005"	"13449"	"13449"	"13420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"39.8"	""	"49.8"	""	"34.9"	"3.0"	"62.7"	"60.3"	""	"1004"	"53"	"37.000"	"30.000"	"0.000235344317836923"	"25"	"0"	"9.565E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPDHVVYAR"	"[K].sFTPDHVVYAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"760.90662"	"1520.80596"	"1520.80589"	"0.04"	"0.00003"	"5/88"	"5"	"88"	"250625.770202637"	"HCD"	"MS2"	"36.33134"	"21.5"	"100.000"	"51.8531"	"16104"	"16104"	"16075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"28.6"	""	"26.5"	""	"46.1"	""	"45.5"	"37.9"	""	"984"	"11"	"36.000"	"29.000"	"4.15877191818862"	"20"	"0.004792"	"0.05636"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFTPDHVVYAR"	"[K].sFTPDHVVYAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"507.60687"	"1520.80606"	"1520.80589"	"0.11"	"0.00006"	"7/88"	"7"	"88"	"2574808.56704712"	"HCD"	"MS2"	"48.61865"	"52.9"	"100.000"	"51.7977"	"16047"	"16047"	"16033"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.4"	""	"65.9"	""	"59.2"	""	"119.6"	"2.8"	"102.4"	"94.6"	""	"984"	"32"	"36.000"	"29.000"	"0.0301970906541079"	"15"	"0"	"0.0001323"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.90955"	"1520.81182"	"1520.81430"	"-1.63"	"-0.00124"	"7/98"	"7"	"98"	"177492.421569824"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"29.3031"	"6981"	"6981"	"6958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"19.9"	""	"19.7"	""	"27.4"	""	"19.0"	"21.0"	""	"1000"	"26"	"36.000"	"30.000"	"0.118842014331244"	"14"	"0.004073"	"0.04431"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"760.91003"	"1520.81279"	"1520.81430"	"-0.99"	"-0.00075"	"10/98"	"10"	"98"	"875679.368286133"	"HCD"	"MS2"	"0"	"56.5"	"100.000"	"29.1315"	"6871"	"6871"	"6843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.5"	""	"69.0"	""	"83.5"	""	"130.1"	""	"93.7"	"88.4"	""	"1011"	"63"	"37.000"	"30.000"	"2.33733606317326E-05"	"21"	"9.9E-05"	"0.000655"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"760.91010"	"1520.81291"	"1520.81430"	"-0.91"	"-0.00069"	"10/98"	"10"	"98"	"857152.256896973"	"HCD"	"MS2"	"0"	"57.7"	"100.000"	"28.9195"	"6826"	"6826"	"6796"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.1"	""	"69.3"	""	"85.8"	""	"144.2"	"0.3"	"93.9"	"81.8"	""	"1025"	"70"	"37.000"	"30.000"	"4.66330552224029E-06"	"21"	"0"	"9.199E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPGATAGGAEK"	"[R].mGPGATAGGAEk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.8936"	"0.0000"	"1"	"1"	"1"	"760.91077"	"1520.81426"	"1520.81430"	"-0.03"	"-0.00002"	"18/98"	"18"	"98"	"372888.66796875"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"29.4464"	"6999"	"6999"	"6976"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"24.4"	""	"35.8"	""	"69.8"	""	"39.8"	"44.5"	""	"1010"	"47"	"37.000"	"30.000"	"0.00112277149477896"	"20"	"0.0001686"	"0.00191"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSGAELEGLVR"	"[K].nFSGAELEGLVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"760.91718"	"1520.82707"	"1520.82702"	"0.03"	"0.00003"	"6/120"	"6"	"120"	"203405.300109863"	"HCD"	"MS2"	"36.77832"	"11.6"	"100.000"	"104.4587"	"37383"	"37383"	"37359"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"11.8"	""	"14.1"	""	"22.1"	""	"28.1"	"21.3"	""	"1051"	"42"	"37.000"	"30.000"	"0.00324767618272737"	"20"	"0"	"0.0001922"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSGAELEGLVR"	"[K].nFSGAELEGLVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"760.91736"	"1520.82744"	"1520.82702"	"0.27"	"0.00021"	"16/120"	"16"	"120"	"327228.379760742"	"HCD"	"MS2"	"28.70905"	"18.1"	"100.000"	"104.2723"	"37290"	"37290"	"37274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"22.8"	""	"13.9"	""	"37.1"	""	"39.3"	"36.2"	""	"1044"	"41"	"37.000"	"30.000"	"0.00411784981396885"	"19"	"9.9E-05"	"0.0004565"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"507.61624"	"1520.83417"	"1520.85721"	"-15.15"	"-0.00768"	"8/82"	"8"	"82"	"898956.226501465"	"HCD"	"MS2"	"51.17428"	"32.9"	"100.000"	"69.0152"	"23072"	"23072"	"23045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"34.6"	""	"42.7"	""	"46.7"	"0.1"	"80.8"	"72.4"	""	"1049"	"27"	"37.000"	"30.000"	"0.115809848246841"	"24"	"0.0001686"	"0.001108"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDDAMAADK"	"[K].lLDDAMAADk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"760.92499"	"1520.84270"	"1520.83945"	"2.14"	"0.00162"	"9/84"	"9"	"84"	"412755.224487305"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"97.2898"	"34498"	"34498"	"34474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.7"	""	"42.3"	""	"51.5"	""	"62.7"	"0.1"	"75.4"	"87.2"	""	"1037"	"70"	"37.000"	"30.000"	"4.69622353565716E-06"	"27"	"0"	"2.751E-07"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLDDAMAADK"	"[K].lLDDAMAADk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"760.92523"	"1520.84319"	"1520.83945"	"2.46"	"0.00187"	"16/84"	"16"	"84"	"428965.394897461"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"97.2273"	"34442"	"34442"	"34420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.9"	""	"45.8"	""	"54.7"	""	"59.8"	""	"83.2"	"84.6"	""	"1036"	"59"	"37.000"	"30.000"	"6.2277297713182E-05"	"27"	"0"	"1.773E-06"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDMAALTAAGK"	"[K].nDMAALTAAGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"760.93018"	"1520.85307"	"1520.85068"	"1.57"	"0.00120"	"8/110"	"8"	"110"	"301082.731567383"	"HCD"	"MS2"	"70.34834"	"23.4"	"100.000"	"73.5178"	"24866"	"24866"	"24842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"35.5"	""	"32.1"	""	"37.7"	""	"38.2"	"49.8"	""	"973"	"13"	"36.000"	"29.000"	"2.52978052313555"	"17"	"0.002711"	"0.02875"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"507.62393"	"1520.85724"	"1520.85721"	"0.02"	"0.00001"	"9/82"	"9"	"82"	"1026518.47796631"	"HCD"	"MS2"	"28.47391"	"40.0"	"100.000"	"69.1190"	"23114"	"23114"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.9"	""	"47.6"	""	"46.6"	""	"57.3"	""	"105.1"	"87.1"	""	"1024"	"35"	"37.000"	"30.000"	"0.0148002809977112"	"26"	"0"	"0.0001134"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"760.93359"	"1520.85991"	"1520.85721"	"1.78"	"0.00135"	"14/82"	"14"	"82"	"577084.923583984"	"HCD"	"MS2"	"0"	"51.2"	"100.000"	"68.9886"	"23027"	"23027"	"23001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.7"	""	"54.1"	""	"53.3"	""	"92.6"	""	"117.4"	"116.4"	""	"999"	"52"	"36.000"	"29.000"	"0.000337703446208294"	"25"	"0"	"1.626E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"760.93414"	"1520.86101"	"1520.85721"	"2.50"	"0.00190"	"16/82"	"16"	"82"	"655826.352844238"	"HCD"	"MS2"	"11.05122"	"57.5"	"100.000"	"69.1098"	"23110"	"23110"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.9"	""	"63.0"	""	"65.5"	""	"91.5"	""	"134.8"	"127.1"	""	"966"	"64"	"36.000"	"29.000"	"2.01347912216172E-05"	""	"0"	"1.992E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDEESVVGK"	"[K].sLDEESVVGk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"P58195"	"Phospholipid scramblase 1 OS=Rattus norvegicus OX=10116 GN=Plscr1 PE=1 SV=1"	"0"	"3"	"3"	"0.7097"	"0.0000"	"1"	"1"	"1"	"507.62540"	"1520.86164"	"1520.85721"	"2.91"	"0.00148"	"9/82"	"9"	"82"	"1108623.69268799"	"HCD"	"MS2"	"34.33168"	"39.8"	"100.000"	"69.0945"	"23070"	"23070"	"23046"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.2"	""	"49.2"	""	"46.4"	""	"58.7"	""	"91.9"	"90.4"	""	"964"	"31"	"36.000"	"29.000"	"0.0351598519942702"	"24"	"0"	"0.0001903"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSLVEEGAVK"	"[R].mSLVEEGAVk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"507.62994"	"1520.87528"	"1520.87584"	"-0.37"	"-0.00019"	"9/80"	"9"	"80"	"292432.558532715"	"HCD"	"MS2"	"32.74675"	"12.3"	"100.000"	"86.8706"	"30297"	"30297"	"30275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"14.8"	""	"14.8"	""	"11.7"	""	"22.8"	"36.4"	""	"926"	"28"	"36.000"	"29.000"	"0.0782674151350831"	""	"0.0001686"	"0.001172"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQTEWSAGTWR"	"[K].aQTEWSAGTWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ET20"	"Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Scamp4 PE=2 SV=1"	"Q9ET20"	"Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Scamp4 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.38562"	"1521.76396"	"1521.76476"	"-0.52"	"-0.00040"	"5/110"	"5"	"110"	"138629.676452637"	"HCD"	"MS2"	"12.55133"	"12.3"	"100.000"	"70.4444"	"23619"	"23619"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"16.6"	""	"15.7"	""	"14.4"	""	"28.1"	"26.8"	""	"806"	"11"	"36.000"	"29.000"	"3.23076259545235"	"14"	"0.007831"	"0.09995"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQTEWSAGTWR"	"[K].aQTEWSAGTWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ET20"	"Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Scamp4 PE=2 SV=1"	"Q9ET20"	"Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Scamp4 PE=2 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"761.38574"	"1521.76421"	"1521.76476"	"-0.36"	"-0.00027"	"8/110"	"8"	"110"	"274592.619995117"	"HCD"	"MS2"	"12.09673"	"19.9"	"100.000"	"70.2410"	"23570"	"23570"	"23547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"19.1"	""	"28.8"	""	"32.0"	""	"43.2"	"43.3"	""	"806"	"32"	"36.000"	"29.000"	"0.0268105081949302"	"16"	"0"	"0.0002521"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQTEWSAGTWR"	"[K].aQTEWSAGTWR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ET20"	"Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Scamp4 PE=2 SV=1"	"Q9ET20"	"Secretory carrier-associated membrane protein 4 OS=Rattus norvegicus OX=10116 GN=Scamp4 PE=2 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"761.38617"	"1521.76506"	"1521.76476"	"0.20"	"0.00015"	"7/110"	"7"	"110"	"269119.139648438"	"HCD"	"MS2"	"39.19292"	"21.8"	"100.000"	"70.1241"	"23489"	"23489"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.6"	""	"24.2"	""	"25.8"	""	"39.4"	"1.3"	"43.3"	"46.3"	""	"813"	"30"	"36.000"	"29.000"	"0.0454004910222798"	"24"	"9.9E-05"	"0.0006006"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"761.39594"	"1521.78459"	"1521.78542"	"-0.54"	"-0.00041"	"13/104"	"13"	"104"	"342931.275695801"	"HCD"	"MS2"	"18.03827"	"14.3"	"100.000"	"114.5168"	"41348"	"41348"	"41326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"17.7"	""	"24.1"	""	"16.8"	""	"23.7"	"30.9"	""	"968"	"57"	"36.000"	"29.000"	"9.45900296595291E-05"	"22"	"0"	"2.087E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGMSGk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"761.39679"	"1521.78630"	"1521.78542"	"0.58"	"0.00044"	"13/104"	"13"	"104"	"387481.121154785"	"HCD"	"MS2"	"29.40765"	"16.8"	"100.000"	"114.4564"	"41311"	"41311"	"41284"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"20.4"	""	"28.0"	""	"18.0"	"1.2"	"31.8"	"36.0"	""	"984"	"55"	"36.000"	"29.000"	"0.000164423959692848"	"22"	"0"	"1.012E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPDFSNLEK"	"[K].gGPDFSNLEk.[-]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5M823"	"NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV=1"	"Q5M823"	"NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV=1"	"0"	"2"	"2"	"0.4643"	"0.0000"	"1"	"1"	"1"	"761.41943"	"1521.83159"	"1521.83133"	"0.17"	"0.00013"	"6/88"	"6"	"88"	"206526.712036133"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"77.9162"	"26646"	"26646"	"26627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"18.4"	""	"26.5"	""	"37.1"	"1.2"	"45.9"	"42.7"	""	"1007"	"28"	"37.000"	"30.000"	"0.0870962536864803"	"29"	"0.006267"	"0.07749"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGISTSDIITR"	"[R].tEGISTSDIITR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836; Q9QZC4"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2; Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus OX=10116 GN=Pcyt1b PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"761.41956"	"1521.83183"	"1521.83217"	"-0.22"	"-0.00017"	"8/108"	"8"	"108"	"260931.399658203"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"69.8381"	"23373"	"23373"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.7"	""	"22.3"	""	"19.4"	""	"28.0"	""	"35.5"	"32.3"	""	"1013"	"39"	"37.000"	"30.000"	"0.00649500440115274"	"19"	"0"	"0.0003461"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEGISTSDIITR"	"[R].tEGISTSDIITR.[I]"	"N-Term(TMT6plex)"	"1"	"2"	"P19836"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2"	"P19836; Q9QZC4"	"Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus OX=10116 GN=Pcyt1a PE=1 SV=2; Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus OX=10116 GN=Pcyt1b PE=1 SV=1"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"3"	"761.41986"	"1521.83245"	"1521.83217"	"0.18"	"0.00014"	"11/108"	"11"	"108"	"256341.063171387"	"HCD"	"MS2"	"9.910655"	"17.2"	"100.000"	"69.9782"	"23464"	"23464"	"23435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"24.1"	""	"21.2"	""	"29.5"	""	"33.0"	"29.9"	""	"1005"	"31"	"37.000"	"30.000"	"0.0392767971805635"	"21"	"0.0001991"	"0.003256"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"761.42908"	"1521.85088"	"1521.85246"	"-1.04"	"-0.00079"	"15/98"	"15"	"98"	"1193421.75976563"	"HCD"	"MS2"	"0"	"99.0"	"100.000"	"54.2335"	"17075"	"17075"	"17047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.3"	""	"132.3"	""	"135.7"	""	"141.5"	""	"157.5"	"166.0"	""	"944"	"54"	"36.000"	"29.000"	"0.000181945784818244"	"22"	"0"	"1.363E-06"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8243"	"0.0000"	"1"	"1"	"1"	"761.42914"	"1521.85100"	"1521.85246"	"-0.96"	"-0.00073"	"18/98"	"18"	"98"	"748441.242370605"	"HCD"	"MS2"	"32.20127"	"74.5"	"100.000"	"45.6399"	"13553"	"13553"	"13525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.8"	""	"88.5"	"2.3"	"102.1"	""	"102.7"	""	"147.2"	"140.9"	""	"941"	"74"	"36.000"	"29.000"	"2.07281063279833E-06"	""	"0"	"4.238E-06"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"761.42950"	"1521.85173"	"1521.85246"	"-0.48"	"-0.00036"	"9/98"	"9"	"98"	"1328173.47875977"	"HCD"	"MS2"	"0"	"111.1"	"100.000"	"54.6430"	"17208"	"17208"	"17188"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"243.7"	""	"146.2"	""	"153.0"	""	"167.7"	""	"174.0"	"170.0"	""	"931"	"65"	"36.000"	"29.000"	"1.37695480317974E-05"	"23"	"0"	"1.292E-07"	"1.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"761.42963"	"1521.85198"	"1521.85246"	"-0.32"	"-0.00024"	"10/98"	"10"	"98"	"1031518.41345215"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"54.9670"	"17340"	"17340"	"17319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"174.3"	""	"121.6"	""	"123.0"	""	"117.2"	""	"136.1"	"150.9"	""	"954"	"62"	"36.000"	"29.000"	"2.6885516182898E-05"	"21"	"0"	"9.78E-07"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7593"	"0.0000"	"1"	"1"	"1"	"761.42963"	"1521.85198"	"1521.85246"	"-0.32"	"-0.00024"	"16/98"	"16"	"98"	"917040.696899414"	"HCD"	"MS2"	"31.42183"	"82.0"	"100.000"	"45.3673"	"13476"	"13476"	"13451"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.5"	""	"95.6"	""	"114.2"	""	"132.0"	""	"146.4"	"153.2"	""	"954"	"54"	"36.000"	"29.000"	"0.000171600432869289"	"29"	"0"	"2.332E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"761.42999"	"1521.85271"	"1521.85246"	"0.16"	"0.00013"	"7/98"	"7"	"98"	"193628.766723633"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"45.9851"	"13694"	"13694"	"13669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"15.9"	""	"23.5"	""	"28.1"	""	"38.5"	"40.1"	""	"922"	"41"	"36.000"	"29.000"	"0.00353753646595798"	"23"	"0.0001686"	"0.001647"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGSSIGAIDSK"	"[R].eGSSIGAIDSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.9153"	"0.0000"	"1"	"1"	"1"	"761.43030"	"1521.85332"	"1521.85246"	"0.57"	"0.00043"	"10/98"	"10"	"98"	"1695579.28082275"	"HCD"	"MS2"	"3.122681"	"136.7"	"100.000"	"54.5164"	"17190"	"17190"	"17173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"292.7"	""	"177.4"	""	"190.6"	""	"188.1"	"2.3"	"208.8"	"231.2"	""	"929"	"59"	"36.000"	"29.000"	"5.79409642365847E-05"	"22"	"0"	"7.763E-07"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDQSLTEAAK"	"[K].tDQSLTEAAk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"Q63663"	"Guanylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Gbp2 PE=1 SV=2"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"761.43048"	"1521.85369"	"1521.85246"	"0.81"	"0.00061"	"8/98"	"8"	"98"	"185674.752807617"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"45.6779"	"13603"	"13603"	"13576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"19.6"	""	"25.3"	""	"28.1"	""	"32.0"	"44.9"	""	"989"	"51"	"36.000"	"29.000"	"0.000367422963689919"	"26"	"9.9E-05"	"0.001023"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMGGAELSDDGR"	"[K].wMGGAELSDDGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"761.86078"	"1522.71428"	"1522.71576"	"-0.97"	"-0.00074"	"8/96"	"8"	"96"	"160062.527893066"	"HCD"	"MS2"	"21.39981"	"14.6"	"100.000"	"78.4506"	"26864"	"26864"	"26836"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"22.8"	""	"19.2"	""	"18.4"	""	"27.9"	"25.4"	""	"382"	"22"	"32.000"	"25.000"	"0.126483352207037"	"20"	"0.0001991"	"0.005146"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMGGAELSDDGR"	"[K].wMGGAELSDDGR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"O70196"	"Prolyl endopeptidase OS=Rattus norvegicus OX=10116 GN=Prep PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"761.86169"	"1522.71611"	"1522.71576"	"0.23"	"0.00018"	"5/96"	"5"	"96"	"133612.759338379"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"78.5911"	"26948"	"26948"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"14.0"	""	"17.1"	""	"17.1"	""	"20.5"	"19.5"	""	"402"	"21"	"33.000"	"26.000"	"0.147977626596442"	"15"	"0.001615"	"0.01368"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CPYEEHIK"	"[K].cPYEEHIk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"508.26422"	"1522.77811"	"1522.77983"	"-1.13"	"-0.00057"	"9/58"	"9"	"58"	"3628036.96765137"	"HCD"	"MS2"	"9.947735"	"126.7"	"100.000"	"60.4971"	"19616"	"19616"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"208.2"	""	"159.0"	""	"128.6"	""	"208.0"	"2.8"	"283.1"	"212.9"	""	"863"	"27"	"36.000"	"29.000"	"0.090569255978355"	"19"	"0.0001686"	"0.00143"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CPYEEHIK"	"[K].cPYEEHIk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7742"	"0.0000"	"1"	"1"	"1"	"508.26422"	"1522.77811"	"1522.77983"	"-1.13"	"-0.00057"	"7/58"	"7"	"58"	"10434260.7639771"	"HCD"	"MS2"	"4.8826"	"317.1"	"100.000"	"60.7821"	"19732"	"19732"	"19716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"463.6"	""	"387.9"	""	"317.5"	""	"530.8"	""	"743.8"	"571.4"	""	"863"	"31"	"36.000"	"29.000"	"0.0345924084351783"	"22"	"0"	"0.0003719"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CPYEEHIK"	"[K].cPYEEHIk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"508.26434"	"1522.77848"	"1522.77983"	"-0.89"	"-0.00045"	"9/58"	"9"	"58"	"4562304.09881592"	"HCD"	"MS2"	"7.137155"	"154.5"	"100.000"	"60.5916"	"19622"	"19622"	"19602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.3"	""	"193.0"	""	"167.3"	""	"259.5"	"5.2"	"366.2"	"252.2"	""	"865"	"29"	"36.000"	"29.000"	"0.0490892177778277"	"20"	"0.0001991"	"0.004539"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CPYEEHIK"	"[K].cPYEEHIk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"508.26447"	"1522.77884"	"1522.77983"	"-0.65"	"-0.00033"	"5/58"	"5"	"58"	"5054586.9052124"	"HCD"	"MS2"	"3.101119"	"171.8"	"100.000"	"61.0679"	"19849"	"19849"	"19832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.5"	""	"206.9"	""	"175.7"	""	"285.3"	"1.7"	"413.7"	"311.8"	""	"854"	"33"	"36.000"	"29.000"	"0.0196077551481343"	"27"	"9.9E-05"	"0.0004367"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CPYEEHIK"	"[K].cPYEEHIk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"508.26456"	"1522.77912"	"1522.77983"	"-0.47"	"-0.00024"	"11/58"	"11"	"58"	"10829505.5217285"	"HCD"	"MS2"	"3.389415"	"359.6"	"100.000"	"60.8883"	"19743"	"19743"	"19725"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"524.1"	""	"424.3"	""	"373.3"	""	"624.8"	"1.3"	"852.8"	"615.5"	""	"854"	"33"	"36.000"	"29.000"	"0.0207218189569226"	"22"	"0"	"0.0003513"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"CPYEEHIK"	"[K].cPYEEHIk.[L]"	"N-Term(TMT6plex); C1(Methylthio); K8(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"508.26462"	"1522.77930"	"1522.77983"	"-0.35"	"-0.00018"	"9/58"	"9"	"58"	"2887806.04705811"	"HCD"	"MS2"	"6.329465"	"103.8"	"100.000"	"61.1969"	"19869"	"19869"	"19849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.6"	""	"121.2"	""	"116.4"	""	"164.7"	"3.3"	"237.1"	"199.2"	""	"872"	"26"	"36.000"	"29.000"	"0.122316906614695"	"18"	"0.0001991"	"0.004236"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVNGVNYASVTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"761.91162"	"1522.81597"	"1522.81752"	"-1.02"	"-0.00078"	"9/114"	"9"	"114"	"919722.021728516"	"HCD"	"MS2"	"0"	"53.5"	"100.000"	"50.1332"	"15373"	"15373"	"15354"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.6"	""	"78.2"	""	"88.6"	""	"78.6"	""	"76.9"	"83.8"	""	"1034"	"46"	"37.000"	"30.000"	"0.00122600020582708"	"17"	"0"	"5.58E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVNGVNYASVTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"761.91199"	"1522.81670"	"1522.81752"	"-0.54"	"-0.00041"	"8/114"	"8"	"114"	"1055637.53143311"	"HCD"	"MS2"	"0"	"61.2"	"100.000"	"49.8281"	"15284"	"15284"	"15260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.1"	""	"105.7"	""	"95.1"	""	"75.2"	"1.8"	"103.5"	"99.3"	""	"1024"	"54"	"37.000"	"30.000"	"0.000207142856549091"	"24"	"0"	"1.59E-06"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVNGVNYASVTR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.91211"	"1522.81694"	"1522.81752"	"-0.38"	"-0.00029"	"6/114"	"6"	"114"	"254319.113708496"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"50.4462"	"15501"	"15501"	"15478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"22.5"	""	"27.9"	""	"22.4"	"1.2"	"35.5"	"35.7"	""	"1025"	"16"	"37.000"	"30.000"	"1.35111983523551"	"13"	"0.005426"	"0.06864"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"761.93958"	"1522.87187"	"1522.87286"	"-0.65"	"-0.00049"	"9/84"	"9"	"84"	"990573.975891113"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"64.6778"	"21312"	"21312"	"21291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.2"	""	"98.1"	""	"102.9"	""	"149.0"	"0.3"	"172.6"	"164.0"	""	"917"	"64"	"36.000"	"29.000"	"2.00603885215059E-05"	""	"0"	"2.666E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"761.93964"	"1522.87200"	"1522.87286"	"-0.57"	"-0.00043"	"9/84"	"9"	"84"	"1023203.36419678"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"64.6951"	"21285"	"21285"	"21263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.3"	""	"107.7"	""	"103.6"	""	"140.8"	"1.5"	"164.5"	"162.5"	""	"917"	"70"	"36.000"	"29.000"	"4.79004220512737E-06"	""	"0"	"1.54E-06"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.5758"	"0.0000"	"1"	"1"	"1"	"761.93976"	"1522.87224"	"1522.87286"	"-0.41"	"-0.00031"	"12/84"	"12"	"84"	"250327.133483887"	"HCD"	"MS2"	"11.02888"	"24.2"	"100.000"	"65.2825"	"21558"	"21558"	"21536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"32.3"	""	"29.0"	""	"43.0"	""	"48.1"	"44.1"	""	"919"	"33"	"36.000"	"29.000"	"0.0242820593190695"	"29"	"0.0001686"	"0.001717"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"761.94012"	"1522.87297"	"1522.87286"	"0.07"	"0.00006"	"9/84"	"9"	"84"	"1386106.73883057"	"HCD"	"MS2"	"0"	"112.7"	"100.000"	"65.0124"	"21414"	"21414"	"21394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.9"	""	"118.1"	""	"133.5"	""	"194.6"	""	"207.0"	"232.0"	""	"933"	"68"	"36.000"	"29.000"	"8.21961825651024E-06"	""	"0"	"8.951E-07"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.7077"	"0.0000"	"1"	"1"	"1"	"761.94012"	"1522.87297"	"1522.87286"	"0.07"	"0.00006"	"9/84"	"9"	"84"	"1579627.16369629"	"HCD"	"MS2"	"0"	"132.1"	"100.000"	"64.9790"	"21435"	"21435"	"21418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.5"	""	"148.6"	""	"158.7"	""	"211.9"	""	"257.4"	"275.2"	""	"933"	"65"	"36.000"	"29.000"	"1.32084436604041E-05"	""	"0"	"1.458E-06"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.4222"	"0.0000"	"1"	"1"	"1"	"508.29614"	"1522.87387"	"1522.87286"	"0.67"	"0.00034"	"10/84"	"10"	"84"	"1640016.73016357"	"HCD"	"MS2"	"3.599129"	"53.8"	"100.000"	"64.9605"	"21427"	"21427"	"21404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.6"	""	"74.2"	""	"73.0"	""	"84.0"	""	"101.4"	"104.1"	""	"886"	"45"	"36.000"	"29.000"	"0.00150800828037543"	""	"0"	"0.0002196"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITSIDTSEAK"	"[K].iTSIDTSEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"508.29639"	"1522.87461"	"1522.87286"	"1.15"	"0.00058"	"10/84"	"10"	"84"	"1223865.05352783"	"HCD"	"MS2"	"10.61451"	"46.6"	"100.000"	"65.0536"	"21431"	"21431"	"21410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.1"	""	"58.4"	""	"69.3"	""	"72.8"	"0.2"	"87.5"	"87.9"	""	"898"	"45"	"36.000"	"29.000"	"0.00156403454451169"	""	"0"	"0.0003407"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNIEVAYLK"	"[R].dNIEVAYLk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"P35559"	"Insulin-degrading enzyme OS=Rattus norvegicus OX=10116 GN=Ide PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"761.94653"	"1522.88579"	"1522.88812"	"-1.53"	"-0.00116"	"5/84"	"5"	"84"	"100676.561462402"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"95.4430"	"33720"	"33720"	"33695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"7.4"	""	"9.3"	""	"10.7"	""	"17.2"	"13.5"	""	"780"	"18"	"35.000"	"28.000"	"0.638358443356845"	"23"	"0.008289"	"0.1051"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.4906"	"0.0000"	"1"	"1"	"1"	"762.40308"	"1523.79888"	"1523.80154"	"-1.75"	"-0.00133"	"8/114"	"8"	"114"	"563084.157653809"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"55.7507"	"17660"	"17660"	"17640"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"54.9"	""	"52.5"	""	"56.8"	"2.4"	"63.9"	"62.5"	""	"946"	"53"	"36.000"	"29.000"	"0.000242583434627916"	"21"	"0"	"1.485E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"762.40393"	"1523.80058"	"1523.80154"	"-0.62"	"-0.00048"	"9/114"	"9"	"114"	"614488.740478516"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"53.5133"	"16781"	"16781"	"16760"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.4"	""	"56.0"	""	"51.9"	""	"43.3"	""	"56.8"	"54.1"	""	"931"	"55"	"36.000"	"29.000"	"0.000159191430490132"	"26"	"0"	"4.79E-07"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"762.40430"	"1523.80132"	"1523.80154"	"-0.14"	"-0.00011"	"9/114"	"9"	"114"	"496933.806640625"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"53.4926"	"16739"	"16739"	"16714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"46.8"	""	"50.2"	""	"43.3"	""	"61.6"	"52.9"	""	"948"	"33"	"36.000"	"29.000"	"0.0262892587942049"	"17"	"0"	"0.000346"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.2800"	"0.0000"	"1"	"1"	"1"	"762.40430"	"1523.80132"	"1523.80154"	"-0.14"	"-0.00011"	"9/114"	"9"	"114"	"783748.079833984"	"HCD"	"MS2"	"0"	"41.8"	"100.000"	"53.7986"	"16864"	"16864"	"16841"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.7"	""	"61.4"	""	"67.5"	""	"54.7"	"0.6"	"65.4"	"68.4"	""	"948"	"51"	"36.000"	"29.000"	"0.000422452944675395"	"25"	"0"	"3.306E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.4154"	"0.0000"	"1"	"1"	"1"	"762.40448"	"1523.80168"	"1523.80154"	"0.10"	"0.00007"	"17/114"	"17"	"114"	"794853.269165039"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"53.1912"	"16650"	"16650"	"16625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.5"	""	"62.5"	""	"61.6"	""	"59.7"	"5.9"	"75.4"	"70.2"	""	"947"	"65"	"36.000"	"29.000"	"1.56429977680932E-05"	"19"	"0"	"5.794E-07"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVNGVNYASVTR"	"[R].nVnGVNYASVTR.[N]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"Q9R1T3"	"Cathepsin Z OS=Rattus norvegicus OX=10116 GN=Ctsz PE=1 SV=2"	"0"	"2"	"2"	"0.4902"	"0.0000"	"1"	"1"	"1"	"762.40460"	"1523.80193"	"1523.80154"	"0.26"	"0.00020"	"9/114"	"9"	"114"	"390640.631958008"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"55.4565"	"17540"	"17540"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.3"	""	"36.3"	""	"37.5"	""	"44.7"	"1.0"	"43.5"	"45.1"	""	"943"	"51"	"36.000"	"29.000"	"0.000342358958930676"	"16"	"0"	"1.392E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"762.42627"	"1523.84526"	"1523.84698"	"-1.13"	"-0.00086"	"10/98"	"10"	"98"	"507458.81036377"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"72.9842"	"24678"	"24678"	"24648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.9"	""	"55.4"	""	"61.6"	""	"67.4"	""	"72.6"	"61.0"	""	"971"	"65"	"36.000"	"29.000"	"1.5247169708769E-05"	"27"	"0"	"2.948E-07"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"508.62006"	"1523.84562"	"1523.84698"	"-0.89"	"-0.00045"	"11/98"	"11"	"98"	"851478.702331543"	"HCD"	"MS2"	"18.91799"	"27.5"	"100.000"	"73.2873"	"24772"	"24772"	"24746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"33.7"	""	"34.7"	""	"42.8"	"0.3"	"55.4"	"49.9"	""	"969"	"42"	"36.000"	"29.000"	"0.00291940119453026"	"22"	"0"	"5.062E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"508.62009"	"1523.84571"	"1523.84698"	"-0.83"	"-0.00042"	"9/98"	"9"	"98"	"1666509.98577881"	"HCD"	"MS2"	"25.26611"	"51.6"	"100.000"	"72.9669"	"24641"	"24641"	"24618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.4"	""	"76.0"	""	"72.0"	""	"82.3"	""	"77.3"	"94.2"	""	"969"	"40"	"36.000"	"29.000"	"0.00442887865492336"	"21"	"0"	"7.97E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8615"	"0.0000"	"1"	"1"	"1"	"762.42676"	"1523.84624"	"1523.84698"	"-0.49"	"-0.00037"	"10/98"	"10"	"98"	"824508.094482422"	"HCD"	"MS2"	"7.072027"	"65.9"	"100.000"	"73.3000"	"24806"	"24806"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.7"	""	"90.3"	""	"89.3"	""	"95.7"	"0.1"	"116.1"	"135.7"	""	"948"	"65"	"36.000"	"29.000"	"1.3607499958797E-05"	"26"	"0"	"2.076E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"508.62039"	"1523.84662"	"1523.84698"	"-0.23"	"-0.00012"	"13/98"	"13"	"98"	"1293945.37866211"	"HCD"	"MS2"	"19.93926"	"37.5"	"100.000"	"73.3047"	"24808"	"24808"	"24787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.1"	""	"51.8"	""	"56.2"	""	"56.1"	"0.5"	"63.1"	"69.4"	""	"951"	"49"	"36.000"	"29.000"	"0.000534749665121273"	"21"	"0"	"1.068E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"762.42700"	"1523.84673"	"1523.84698"	"-0.17"	"-0.00013"	"16/98"	"16"	"98"	"457217.034240723"	"HCD"	"MS2"	"0"	"38.9"	"100.000"	"72.8515"	"24594"	"24594"	"24570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.5"	""	"60.1"	""	"48.1"	""	"64.1"	""	"64.3"	"66.8"	""	"951"	"60"	"36.000"	"29.000"	"4.79899747329463E-05"	"25"	"0"	"7.237E-07"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"508.62048"	"1523.84690"	"1523.84698"	"-0.05"	"-0.00003"	"10/98"	"10"	"98"	"1398313.01672363"	"HCD"	"MS2"	"50.84768"	"45.1"	"100.000"	"73.0119"	"24689"	"24689"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.1"	""	"61.3"	""	"64.2"	""	"70.6"	""	"80.0"	"80.8"	""	"949"	"31"	"36.000"	"29.000"	"0.0370882393277162"	"20"	"0"	"6.569E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALGAGFSDK"	"[R].eAALGAGFSDk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"Q60587"	"Trifunctional enzyme subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hadhb PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"762.42725"	"1523.84722"	"1523.84698"	"0.16"	"0.00012"	"16/98"	"16"	"98"	"766749.201843262"	"HCD"	"MS2"	"8.367816"	"65.4"	"100.000"	"73.1905"	"24732"	"24732"	"24714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.6"	""	"84.5"	""	"90.4"	""	"104.2"	""	"111.4"	"112.5"	""	"951"	"57"	"36.000"	"29.000"	"8.63277697648626E-05"	"25"	"0"	"3.313E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGAVYSGEPK"	"[K].aSGAVYSGEPk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"Q8CHN6"	"Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"762.42743"	"1523.84758"	"1523.84698"	"0.40"	"0.00030"	"8/94"	"8"	"94"	"182169.088439941"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"42.8260"	"12407"	"12407"	"12378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"20.8"	""	"17.3"	""	"43.1"	""	"38.7"	"36.9"	""	"947"	"45"	"36.000"	"29.000"	"0.00139097711020378"	"28"	"0.0001686"	"0.001269"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNTGDNVHIVR"	"[K].gLNTGDNVHIVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"508.62125"	"1523.84919"	"1523.84916"	"0.02"	"0.00001"	"17/110"	"17"	"110"	"4525701.7947998"	"HCD"	"MS2"	"20.75893"	"114.2"	"100.000"	"42.0372"	"12119"	"12119"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.7"	""	"123.5"	""	"144.9"	""	"174.7"	"0.5"	"238.5"	"257.8"	""	"941"	"58"	"36.000"	"29.000"	"8.21409322949098E-05"	"16"	"0"	"2.906E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLNTGDNVHIVR"	"[K].gLNTGDNVHIVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"P27435"	"Tryptase OS=Rattus norvegicus OX=10116 GN=Tpsab1 PE=1 SV=2"	"0"	"3"	"3"	"0.9833"	"0.0000"	"1"	"1"	"1"	"508.62131"	"1523.84937"	"1523.84916"	"0.14"	"0.00007"	"10/110"	"10"	"110"	"4899918.69049072"	"HCD"	"MS2"	"29.17303"	"112.2"	"100.000"	"42.1454"	"12129"	"12129"	"12104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.1"	""	"109.8"	""	"145.1"	""	"170.1"	""	"235.5"	"254.7"	""	"936"	"60"	"36.000"	"29.000"	"4.78901120387393E-05"	"17"	"0"	"1.047E-06"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RTDEAAFQK"	"[R].rTDEAAFQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"508.62387"	"1523.85706"	"1523.85821"	"-0.76"	"-0.00038"	"7/84"	"7"	"84"	"6097674.24169922"	"HCD"	"MS2"	"45.96758"	"237.1"	"100.000"	"35.9634"	"9626"	"9626"	"9605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"352.3"	""	"256.8"	""	"284.0"	""	"421.1"	""	"453.7"	"485.0"	""	"972"	"25"	"36.000"	"29.000"	"0.141786952880457"	"19"	"0"	"0.0001906"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RTDEAAFQK"	"[R].rTDEAAFQk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"P05942"	"Protein S100-A4 OS=Rattus norvegicus OX=10116 GN=S100a4 PE=2 SV=1"	"1"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"508.62411"	"1523.85779"	"1523.85821"	"-0.28"	"-0.00014"	"6/84"	"6"	"84"	"5308415.06787109"	"HCD"	"MS2"	"43.62236"	"227.7"	"100.000"	"35.8698"	"9625"	"9625"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"340.6"	""	"248.4"	""	"283.9"	""	"399.8"	"0.3"	"440.5"	"445.7"	""	"920"	"27"	"36.000"	"29.000"	"0.0894865637546424"	"20"	"0"	"0.0001865"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSDGTISASK"	"[R].tVSDGTISASk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"762.43604"	"1523.86479"	"1523.86811"	"-2.18"	"-0.00166"	"7/98"	"7"	"98"	"333793.45690918"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"46.5519"	"13954"	"13954"	"13938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"39.8"	""	"38.4"	""	"49.6"	""	"61.7"	"61.6"	""	"885"	"49"	"36.000"	"29.000"	"0.000615054039311909"	"20"	"9.9E-05"	"0.0005273"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVSDGTISASK"	"[R].tVSDGTISASk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"Q2HWF0"	"Formin-binding protein 1-like OS=Rattus norvegicus OX=10116 GN=Fnbp1l PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"762.43701"	"1523.86675"	"1523.86811"	"-0.89"	"-0.00068"	"15/98"	"15"	"98"	"378695.179321289"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"46.9658"	"14085"	"14085"	"14061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.6"	""	"38.2"	""	"41.3"	""	"66.8"	"2.0"	"68.9"	"65.0"	""	"877"	"57"	"36.000"	"29.000"	"7.99778265467162E-05"	"22"	"0"	"4.161E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEIEFEGLMR"	"[K].vGEIEFEGLmR.[T]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"762.89618"	"1524.78508"	"1524.79295"	"-5.16"	"-0.00393"	"7/88"	"7"	"88"	"326918.317382813"	"HCD"	"MS2"	"29.9452"	"14.1"	"100.000"	"99.8095"	"35487"	"35487"	"35461"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"14.1"	""	"16.6"	""	"38.8"	""	"23.4"	"27.2"	""	"853"	"19"	"36.000"	"29.000"	"0.512765781364327"	"15"	"0.00307"	"0.03293"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEIEFEGLMR"	"[K].vGEIEFEGLmR.[T]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"762.89648"	"1524.78569"	"1524.79295"	"-4.76"	"-0.00363"	"11/88"	"11"	"88"	"229446.672058105"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"99.9353"	"35566"	"35566"	"35542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"15.3"	""	"11.1"	""	"27.3"	""	"21.4"	"24.7"	""	"845"	"23"	"36.000"	"29.000"	"0.190909136498405"	"14"	"0.001316"	"0.0104"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGEIEFEGLMR"	"[K].vGEIEFEGLmR.[T]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"Q62847"	"Gamma-adducin OS=Rattus norvegicus OX=10116 GN=Add3 PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"762.89709"	"1524.78691"	"1524.79295"	"-3.96"	"-0.00302"	"9/88"	"9"	"88"	"336761.578491211"	"HCD"	"MS2"	"34.78332"	"13.5"	"100.000"	"99.8985"	"35551"	"35551"	"35527"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"12.3"	""	"15.3"	""	"33.4"	""	"23.5"	"28.9"	""	"862"	"36"	"36.000"	"29.000"	"0.0114413499721146"	"21"	"0.0001686"	"0.001199"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTELSTPELLR"	"[R].hTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"508.95694"	"1524.85627"	"1524.85832"	"-1.35"	"-0.00069"	"8/92"	"8"	"92"	"5977364.94415283"	"HCD"	"MS2"	"3.332049"	"50.8"	"100.000"	"58.1902"	"18644"	"18644"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.7"	""	"76.5"	""	"63.0"	""	"80.1"	"1.6"	"90.5"	"86.6"	""	"906"	"53"	"36.000"	"29.000"	"0.000233936615280248"	"25"	"0"	"1.382E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTELSTPELLR"	"[R].hTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8197"	"0.0000"	"1"	"1"	"1"	"508.95706"	"1524.85663"	"1524.85832"	"-1.11"	"-0.00056"	"8/92"	"8"	"92"	"2732812.02142334"	"HCD"	"MS2"	"14.48437"	"40.6"	"100.000"	"57.8914"	"18522"	"18522"	"18502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.1"	""	"56.3"	""	"50.3"	""	"61.2"	"1.9"	"69.1"	"73.5"	""	"901"	"61"	"36.000"	"29.000"	"3.46493263349117E-05"	"27"	"0"	"8.054E-06"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTELSTPELLR"	"[R].hTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"508.95706"	"1524.85663"	"1524.85832"	"-1.11"	"-0.00056"	"11/92"	"11"	"92"	"2891078.00598145"	"HCD"	"MS2"	"23.19608"	"59.5"	"100.000"	"58.4962"	"18769"	"18769"	"18750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.1"	""	"69.9"	""	"74.9"	""	"104.9"	""	"122.3"	"108.9"	""	"901"	"35"	"36.000"	"29.000"	"0.0136362449935964"	"26"	"0"	"4.76E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTELSTPELLR"	"[R].hTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"508.95712"	"1524.85682"	"1524.85832"	"-0.99"	"-0.00050"	"8/92"	"8"	"92"	"2811487.27526855"	"HCD"	"MS2"	"21.61214"	"40.6"	"100.000"	"57.6011"	"18439"	"18439"	"18418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.0"	""	"53.4"	""	"53.4"	""	"50.9"	"1.9"	"77.7"	"71.3"	""	"897"	"57"	"36.000"	"29.000"	"9.17830419571015E-05"	"26"	"0"	"3.823E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTELSTPELLR"	"[R].hTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.8039"	"0.0000"	"1"	"1"	"1"	"508.95724"	"1524.85718"	"1524.85832"	"-0.75"	"-0.00038"	"8/92"	"8"	"92"	"5957674.65869141"	"HCD"	"MS2"	"3.767334"	"55.6"	"100.000"	"57.8934"	"18559"	"18559"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.4"	""	"81.6"	""	"77.7"	""	"87.3"	"0.5"	"106.1"	"85.1"	""	"898"	"51"	"36.000"	"29.000"	"0.000330556986775137"	"25"	"0"	"6.202E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTELSTPELLR"	"[R].hTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"508.95761"	"1524.85828"	"1524.85832"	"-0.03"	"-0.00001"	"11/92"	"11"	"92"	"2877713.65844727"	"HCD"	"MS2"	"29.30854"	"57.5"	"100.000"	"58.2087"	"18687"	"18687"	"18669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.2"	""	"76.1"	""	"76.6"	""	"91.6"	"0.2"	"120.4"	"109.9"	""	"898"	"28"	"36.000"	"29.000"	"0.0650498562241598"	"23"	"0"	"0.0001494"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGESAEAVK"	"[R].iYGESAEAVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"762.93634"	"1524.86540"	"1524.86738"	"-1.30"	"-0.00099"	"8/78"	"8"	"78"	"280179.006286621"	"HCD"	"MS2"	"16.20618"	"27.9"	"100.000"	"62.2127"	"20311"	"20311"	"20281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"29.4"	""	"36.5"	""	"50.2"	""	"56.7"	"55.1"	""	"812"	"51"	"36.000"	"29.000"	"0.000324732707532854"	"23"	"0"	"1.64E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"508.96024"	"1524.86615"	"1524.86738"	"-0.80"	"-0.00041"	"10/82"	"10"	"82"	"1962655.23101807"	"HCD"	"MS2"	"23.6435"	"44.0"	"100.000"	"79.5085"	"27321"	"27321"	"27305"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.3"	""	"55.3"	""	"67.1"	""	"68.9"	""	"81.0"	"92.2"	""	"810"	"40"	"36.000"	"29.000"	"0.00440002377564911"	"20"	"0"	"0.0003936"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"762.93683"	"1524.86638"	"1524.86738"	"-0.66"	"-0.00050"	"16/82"	"16"	"82"	"406865.372680664"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"78.9511"	"27068"	"27068"	"27040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"44.4"	""	"41.8"	""	"61.2"	""	"65.0"	"69.5"	""	"810"	"56"	"36.000"	"29.000"	"0.000102672709535165"	"24"	"0"	"7.333E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"762.93689"	"1524.86650"	"1524.86738"	"-0.58"	"-0.00044"	"12/82"	"12"	"82"	"179168.296813965"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"79.5667"	"27318"	"27318"	"27291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.9"	""	"19.8"	""	"20.1"	""	"26.5"	""	"26.2"	"30.7"	""	"810"	"39"	"36.000"	"29.000"	"0.00467148569417542"	"21"	"0"	"0.0003299"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"508.96036"	"1524.86652"	"1524.86738"	"-0.56"	"-0.00029"	"11/82"	"11"	"82"	"2131625.45288086"	"HCD"	"MS2"	"13.36555"	"68.1"	"100.000"	"79.2089"	"27199"	"27199"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.9"	""	"91.6"	""	"89.0"	""	"107.6"	""	"148.3"	"130.1"	""	"810"	"56"	"36.000"	"29.000"	"0.000101263987148705"	"24"	"0"	"8.5E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"762.93701"	"1524.86675"	"1524.86738"	"-0.42"	"-0.00032"	"15/82"	"15"	"82"	"377531.138122559"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"79.0684"	"27142"	"27142"	"27118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.3"	""	"42.8"	"2.0"	"50.5"	""	"59.6"	"0.7"	"52.0"	"57.3"	""	"820"	"56"	"36.000"	"29.000"	"0.000102514159829554"	"25"	"0"	"1.755E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"508.96051"	"1524.86698"	"1524.86738"	"-0.26"	"-0.00013"	"11/82"	"11"	"82"	"2323550.31359863"	"HCD"	"MS2"	"4.760242"	"68.7"	"100.000"	"79.1125"	"27133"	"27133"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.9"	""	"97.4"	""	"95.9"	""	"105.7"	""	"146.6"	"132.7"	""	"831"	"47"	"36.000"	"29.000"	"0.000906924278370768"	"22"	"0"	"9.873E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8507"	"0.0000"	"1"	"1"	"1"	"762.93719"	"1524.86711"	"1524.86738"	"-0.18"	"-0.00013"	"9/82"	"9"	"82"	"1227488.22607422"	"HCD"	"MS2"	"0"	"94.6"	"100.000"	"79.3656"	"27263"	"27263"	"27244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.5"	""	"122.3"	""	"141.0"	""	"159.0"	""	"177.6"	"183.5"	""	"831"	"67"	"36.000"	"29.000"	"8.70103725406046E-06"	"27"	"0"	"6.819E-07"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"508.96057"	"1524.86716"	"1524.86738"	"-0.14"	"-0.00007"	"12/82"	"12"	"82"	"1686515.17358398"	"HCD"	"MS2"	"23.17669"	"39.6"	"100.000"	"79.3983"	"27249"	"27249"	"27233"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.2"	""	"50.0"	""	"59.5"	""	"58.9"	"1.5"	"81.0"	"82.1"	""	"831"	"39"	"36.000"	"29.000"	"0.00521880449915221"	"20"	"0"	"0.0002461"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8732"	"0.0000"	"1"	"1"	"1"	"762.93738"	"1524.86748"	"1524.86738"	"0.07"	"0.00005"	"9/82"	"9"	"82"	"1176320.09747314"	"HCD"	"MS2"	"0"	"91.6"	"100.000"	"79.2461"	"27187"	"27187"	"27173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.9"	""	"126.4"	"2.7"	"134.4"	""	"144.6"	""	"163.0"	"178.0"	""	"829"	"71"	"36.000"	"29.000"	"3.05861303388513E-06"	"26"	"0"	"3.464E-06"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVASGEK"	"[R].yLAEVASGEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"762.93768"	"1524.86809"	"1524.86738"	"0.47"	"0.00035"	"12/82"	"12"	"82"	"191167.856628418"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"79.6770"	"27390"	"27390"	"27366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.8"	""	"23.3"	""	"20.4"	""	"29.5"	""	"37.0"	"33.9"	""	"816"	"38"	"36.000"	"29.000"	"0.0069128982258251"	"23"	"9.9E-05"	"0.0006747"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYGESAEAVK"	"[R].iYGESAEAVk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"Q5XI81"	"Fragile X mental retardation syndrome-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fxr1 PE=1 SV=1"	"0"	"2"	"2"	"0.9306"	"0.0000"	"1"	"1"	"1"	"762.93774"	"1524.86821"	"1524.86738"	"0.55"	"0.00042"	"9/78"	"9"	"78"	"356055.030273438"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"62.3341"	"20327"	"20327"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.7"	""	"37.8"	""	"37.3"	""	"65.9"	"0.5"	"70.8"	"78.5"	""	"816"	"72"	"36.000"	"29.000"	"2.56838522605736E-06"	"22"	"0"	"1.144E-06"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPIPGESPK"	"[K].iEPIPGESPk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"762.95483"	"1524.90239"	"1524.90377"	"-0.90"	"-0.00069"	"10/84"	"10"	"84"	"307921.9375"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"72.3264"	"24381"	"24381"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"30.2"	""	"29.4"	""	"31.7"	""	"44.6"	"44.8"	""	"539"	"33"	"34.000"	"27.000"	"0.0146743464941032"	"17"	"0.0001991"	"0.00246"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPIPGESPK"	"[K].iEPIPGESPk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"762.95526"	"1524.90325"	"1524.90377"	"-0.34"	"-0.00026"	"13/84"	"13"	"84"	"362236.465576172"	"HCD"	"MS2"	"6.688042"	"23.5"	"100.000"	"72.6209"	"24500"	"24500"	"24480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"33.6"	""	"34.4"	""	"29.8"	"1.3"	"41.0"	"51.1"	""	"547"	"36"	"34.000"	"27.000"	"0.00712782995924698"	"15"	"0.0001686"	"0.0013"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPIPGESPK"	"[K].iEPIPGESPk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"762.95551"	"1524.90373"	"1524.90377"	"-0.02"	"-0.00002"	"11/84"	"11"	"84"	"306089.673217773"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"72.4347"	"24454"	"24454"	"24432"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"25.0"	""	"29.2"	""	"40.2"	""	"39.7"	"41.8"	""	"547"	"29"	"34.000"	"27.000"	"0.0325804689195487"	"17"	"0.0001991"	"0.002699"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPIPGESPK"	"[K].iEPIPGESPk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"762.95551"	"1524.90373"	"1524.90377"	"-0.02"	"-0.00002"	"8/84"	"8"	"84"	"369950.780151367"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"72.7283"	"24573"	"24573"	"24552"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"31.7"	""	"36.5"	""	"35.5"	"0.3"	"47.4"	"53.6"	""	"547"	"35"	"34.000"	"27.000"	"0.00776170854278766"	"20"	"0.0001686"	"0.001361"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDNMFQIGK"	"[R].dDNMFQIGk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63396"	"Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus OX=10116 GN=Sub1 PE=1 SV=3"	"Q63396"	"Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus OX=10116 GN=Sub1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.40460"	"1525.80193"	"1525.80849"	"-4.30"	"-0.00328"	"10/78"	"10"	"78"	"195638.827758789"	"HCD"	"MS2"	"24.09408"	"15.4"	"100.000"	"94.2162"	"33257"	"33257"	"33232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.3"	""	"12.2"	""	"21.1"	""	"16.9"	""	"31.3"	"37.3"	""	"928"	"17"	"36.000"	"29.000"	"1.01278667909515"	"14"	"0.00307"	"0.03346"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDNMFQIGK"	"[R].dDNMFQIGk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q63396"	"Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus OX=10116 GN=Sub1 PE=1 SV=3"	"Q63396"	"Activated RNA polymerase II transcriptional coactivator p15 OS=Rattus norvegicus OX=10116 GN=Sub1 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"763.40472"	"1525.80217"	"1525.80849"	"-4.14"	"-0.00316"	"9/78"	"9"	"78"	"183078.496520996"	"HCD"	"MS2"	"21.22025"	"15.6"	"100.000"	"94.2538"	"33237"	"33237"	"33211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"16.9"	""	"14.2"	""	"23.1"	""	"31.8"	"31.2"	""	"932"	"20"	"36.000"	"29.000"	"0.433896269968009"	"18"	"0.00307"	"0.03322"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQLNDSAK"	"[R].eYQLNDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"763.41614"	"1525.82500"	"1525.82624"	"-0.82"	"-0.00062"	"7/88"	"7"	"88"	"292849.589904785"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"49.4661"	"15102"	"15102"	"15076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.0"	""	"27.3"	""	"33.7"	""	"46.7"	""	"64.6"	"68.1"	""	"915"	"36"	"36.000"	"29.000"	"0.0105290963146439"	"21"	"0.0001686"	"0.001158"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQLNDSAK"	"[R].eYQLNDSAk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"P59215"	"Guanine nucleotide-binding protein G(o) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnao1 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"763.41620"	"1525.82512"	"1525.82624"	"-0.74"	"-0.00056"	"11/88"	"11"	"88"	"357926.477539063"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"49.0761"	"14978"	"14978"	"14956"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.6"	""	"43.5"	""	"41.6"	""	"59.8"	""	"89.8"	"80.2"	""	"915"	"29"	"36.000"	"29.000"	"0.0643266742289436"	"15"	"9.9E-05"	"0.0004743"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAMVEFVK"	"[K].eDAMVEFVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7TNY6"	"Golgi resident protein GCP60 OS=Rattus norvegicus OX=10116 GN=Acbd3 PE=1 SV=3"	"Q7TNY6"	"Golgi resident protein GCP60 OS=Rattus norvegicus OX=10116 GN=Acbd3 PE=1 SV=3"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"763.42023"	"1525.83318"	"1525.83364"	"-0.30"	"-0.00023"	"6/74"	"6"	"74"	"159528.558959961"	"HCD"	"MS2"	"39.51398"	"15.2"	"100.000"	"101.0523"	"36019"	"36019"	"36002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"20.9"	""	"25.4"	""	"26.5"	""	"24.2"	"30.4"	""	"912"	"38"	"36.000"	"29.000"	"0.00748108936578989"	"26"	"0"	"0.0003545"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAMVEFVK"	"[K].eDAMVEFVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q7TNY6"	"Golgi resident protein GCP60 OS=Rattus norvegicus OX=10116 GN=Acbd3 PE=1 SV=3"	"Q7TNY6"	"Golgi resident protein GCP60 OS=Rattus norvegicus OX=10116 GN=Acbd3 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"763.42035"	"1525.83342"	"1525.83364"	"-0.14"	"-0.00011"	"4/74"	"4"	"74"	"127089.370910645"	"HCD"	"MS2"	"100"	"12.1"	"100.000"	"100.8892"	"35926"	"35926"	"35906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"14.9"	""	"20.0"	""	"21.3"	""	"21.1"	"23.5"	""	"908"	"8"	"36.000"	"29.000"	"7.41405584344028"	"17"	"0.007792"	"0.09948"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEPNSYAISFR"	"[R].nEPNSYAISFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"763.89349"	"1526.77971"	"1526.78007"	"-0.24"	"-0.00018"	"5/114"	"5"	"114"	"239665.374084473"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"70.3701"	"23622"	"23622"	"23604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"24.3"	""	"24.9"	""	"28.6"	"1.9"	"26.2"	"32.4"	""	"798"	"28"	"36.000"	"29.000"	"0.057939253541751"	"21"	"0.001261"	"0.009924"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"SSNVVPYDFNR"	"[R].sSNVVPYDFNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"763.89368"	"1526.78008"	"1526.78007"	"0.00"	"0.00000"	"9/110"	"9"	"110"	"787321.529724121"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"70.6745"	"23745"	"23745"	"23730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.7"	""	"62.2"	""	"61.6"	""	"73.2"	""	"73.5"	"73.6"	""	"797"	"28"	"36.000"	"29.000"	"0.060733502238822"	"14"	"0.0001991"	"0.003804"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NEPNSYAISFR"	"[R].nEPNSYAISFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"763.89368"	"1526.78008"	"1526.78007"	"0.00"	"0.00000"	"7/114"	"7"	"114"	"787321.529724121"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"70.6745"	"23745"	"23745"	"23730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.7"	""	"62.2"	""	"61.6"	""	"73.2"	""	"73.5"	"73.6"	""	"797"	"28"	"36.000"	"29.000"	"0.0661345382613868"	"14"	"0.000264"	"0.00612"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEPNSYAISFR"	"[R].nEPNSYAISFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.89435"	"1526.78142"	"1526.78007"	"0.88"	"0.00067"	"5/114"	"5"	"114"	"228362.689331055"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"70.2738"	"23550"	"23550"	"23525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"15.6"	""	"23.7"	""	"26.3"	""	"28.8"	"30.1"	""	"805"	"29"	"36.000"	"29.000"	"0.0512584990109207"	"14"	"0.001049"	"0.008684"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEPNSYAISFR"	"[R].nEPNSYAISFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"763.89435"	"1526.78142"	"1526.78007"	"0.88"	"0.00067"	"10/114"	"10"	"114"	"858863.567138672"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"70.5761"	"23672"	"23672"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.7"	""	"67.9"	""	"72.5"	""	"79.3"	"1.6"	"78.4"	"76.0"	""	"805"	"34"	"36.000"	"29.000"	"0.0150926633403807"	""	"0"	"9.622E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNGPENWHK"	"[K].sNGPENWHk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"509.60812"	"1526.80982"	"1526.81160"	"-1.16"	"-0.00059"	"5/86"	"5"	"86"	"10230271.9609375"	"HCD"	"MS2"	"14.15731"	"314.1"	"100.000"	"36.6214"	"9889"	"9889"	"9879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"575.2"	""	"362.0"	""	"455.4"	""	"527.8"	""	"519.4"	"531.4"	""	"829"	"29"	"36.000"	"29.000"	"0.0486995036522435"	"17"	"0"	"0.0002326"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDMEISAYR"	"[K].lALDmEISAYR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"P70615"	"Lamin-B1 OS=Rattus norvegicus OX=10116 GN=Lmnb1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.90881"	"1526.81035"	"1526.80860"	"1.15"	"0.00088"	"7/88"	"7"	"88"	"180802.266662598"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"99.0057"	"35190"	"35190"	"35170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.3"	""	"6.9"	""	"4.6"	""	"29.2"	""	"21.7"	"20.9"	""	"827"	"23"	"36.000"	"29.000"	"0.207718660767507"	"14"	"0.002166"	"0.01974"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNGPENWHK"	"[K].sNGPENWHk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"509.60855"	"1526.81110"	"1526.81160"	"-0.33"	"-0.00017"	"8/86"	"8"	"86"	"11587818.2032471"	"HCD"	"MS2"	"13.70192"	"355.8"	"100.000"	"36.4864"	"9872"	"9872"	"9860"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"663.6"	""	"390.0"	""	"517.8"	""	"603.8"	"13.2"	"592.9"	"582.2"	""	"837"	"32"	"36.000"	"29.000"	"0.0264055648664961"	"16"	"0"	"0.0001347"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTDSINLYK"	"[K].dTDSINLYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"763.92535"	"1526.84343"	"1526.84664"	"-2.10"	"-0.00161"	"7/76"	"7"	"76"	"297086.465698242"	"HCD"	"MS2"	"0"	"31.2"	"100.000"	"77.0098"	"26282"	"26282"	"26268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"34.6"	""	"36.7"	""	"50.6"	""	"60.3"	"61.6"	""	"768"	"38"	"35.000"	"28.000"	"0.00655135637377199"	"23"	"0.0001991"	"0.005051"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTDSINLYK"	"[K].dTDSINLYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"763.92566"	"1526.84404"	"1526.84664"	"-1.70"	"-0.00130"	"13/76"	"13"	"76"	"512680.411621094"	"HCD"	"MS2"	"0"	"49.4"	"100.000"	"77.1640"	"26374"	"26374"	"26361"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.1"	""	"58.9"	""	"52.7"	""	"94.4"	"2.4"	"94.9"	"88.2"	""	"772"	"40"	"35.000"	"28.000"	"0.0042324058371127"	"24"	"0"	"6.519E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLTSEEFAK"	"[R].gSLTSEEFAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"0"	"2"	"2"	"0.9242"	"0.0000"	"1"	"1"	"1"	"763.92596"	"1526.84465"	"1526.84664"	"-1.31"	"-0.00100"	"9/82"	"9"	"82"	"412418.717163086"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"69.0668"	"23059"	"23059"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"46.8"	""	"54.1"	""	"70.0"	""	"77.3"	"81.2"	""	"769"	"66"	"35.000"	"28.000"	"1.04687865295595E-05"	"22"	"0"	"1.431E-06"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTDSINLYK"	"[K].dTDSINLYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"509.61987"	"1526.84507"	"1526.84664"	"-1.03"	"-0.00053"	"6/76"	"6"	"76"	"690717.982177734"	"HCD"	"MS2"	"62.95549"	"35.7"	"100.000"	"77.3448"	"26445"	"26445"	"26428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"46.7"	""	"44.6"	""	"56.8"	""	"67.2"	"61.1"	""	"775"	"16"	"35.000"	"28.000"	"0.923148794376492"	"19"	"0.0001991"	"0.002376"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTDSINLYK"	"[K].dTDSINLYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"763.92651"	"1526.84575"	"1526.84664"	"-0.59"	"-0.00045"	"16/76"	"16"	"76"	"688132.981506348"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"77.3031"	"26398"	"26398"	"26387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.7"	""	"64.3"	""	"71.8"	""	"94.5"	""	"128.6"	"116.8"	""	"776"	"55"	"35.000"	"28.000"	"0.000118804181227198"	"26"	"0"	"2.434E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLTSEEFAK"	"[R].gSLTSEEFAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"763.92676"	"1526.84624"	"1526.84664"	"-0.27"	"-0.00020"	"15/82"	"15"	"82"	"387089.860778809"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"69.4597"	"23253"	"23253"	"23227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.1"	""	"47.7"	""	"47.2"	""	"64.5"	""	"68.0"	"74.2"	""	"800"	"52"	"36.000"	"29.000"	"0.000272935477656668"	"22"	"0"	"2.881E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDQESLK"	"[K].ySVDQESLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"763.92688"	"1526.84648"	"1526.84664"	"-0.11"	"-0.00008"	"13/82"	"13"	"82"	"357611.073791504"	"HCD"	"MS2"	"0"	"34.6"	"100.000"	"62.9331"	"20571"	"20571"	"20545"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"40.7"	""	"44.3"	""	"57.2"	"0.5"	"66.3"	"61.9"	""	"800"	"42"	"36.000"	"29.000"	"0.00244940156689909"	"22"	"0"	"0.0002343"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTDSINLYK"	"[K].dTDSINLYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"Q80U96"	"Exportin-1 OS=Rattus norvegicus OX=10116 GN=Xpo1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"763.92700"	"1526.84673"	"1526.84664"	"0.05"	"0.00004"	"8/76"	"8"	"76"	"507617.811157227"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"77.4479"	"26485"	"26485"	"26474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.8"	""	"58.4"	""	"72.2"	""	"72.0"	"1.5"	"87.8"	"85.4"	""	"797"	"51"	"36.000"	"29.000"	"0.000302990021360663"	"27"	"0"	"3.605E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLTSEEFAK"	"[R].gSLTSEEFAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"763.92706"	"1526.84685"	"1526.84664"	"0.13"	"0.00010"	"8/82"	"8"	"82"	"405295.032897949"	"HCD"	"MS2"	"20.53635"	"40.1"	"100.000"	"69.3890"	"23190"	"23190"	"23168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"45.8"	""	"47.6"	""	"69.1"	"1.3"	"80.6"	"84.8"	""	"797"	"24"	"36.000"	"29.000"	"0.163466335040163"	"17"	"9.9E-05"	"0.0005057"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLTSEEFAK"	"[R].gSLTSEEFAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"P0C0A2"	"Vacuolar protein-sorting-associated protein 36 OS=Rattus norvegicus OX=10116 GN=Vps36 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"763.92719"	"1526.84709"	"1526.84664"	"0.29"	"0.00022"	"8/82"	"8"	"82"	"368553.487915039"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"69.1212"	"23115"	"23115"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.5"	""	"40.5"	""	"53.3"	""	"63.9"	"2.1"	"64.0"	"77.8"	""	"777"	"54"	"35.000"	"28.000"	"0.000161953755478226"	"22"	"9.9E-05"	"0.0004284"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSVDQESLK"	"[K].ySVDQESLk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"P42676"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1"	"0"	"2"	"2"	"0.8302"	"0.0000"	"1"	"1"	"1"	"763.92761"	"1526.84795"	"1526.84664"	"0.85"	"0.00065"	"8/82"	"8"	"82"	"300078.831665039"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"62.8600"	"20574"	"20574"	"20548"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"41.6"	""	"43.2"	""	"47.1"	"0.1"	"57.7"	"61.3"	""	"770"	"53"	"35.000"	"28.000"	"0.00019973801498765"	"25"	"9.9E-05"	"0.0004529"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGPELLLDSNIR"	"[M].aGPELLLDSNIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"Q5U2V8"	"ER membrane protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Emc3 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"763.94067"	"1526.87407"	"1526.87397"	"0.06"	"0.00005"	"6/102"	"6"	"102"	"121063.903869629"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"102.2016"	"36458"	"36458"	"36430"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.3"	""	"5.0"	""	"8.4"	""	"11.3"	""	"12.3"	"17.3"	""	"680"	"16"	"35.000"	"28.000"	"0.798875159088424"	"14"	"0.005266"	"0.06643"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTILHDNLK"	"[K].dTILHDNLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"509.63608"	"1526.89368"	"1526.89426"	"-0.38"	"-0.00019"	"11/78"	"11"	"78"	"1965130.37469482"	"HCD"	"MS2"	"0"	"69.8"	"100.000"	"56.5961"	"17996"	"17996"	"17983"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"72.8"	""	"80.6"	""	"120.5"	""	"162.4"	"166.9"	""	"583"	"37"	"34.000"	"27.000"	"0.00592432068687909"	"24"	"0"	"0.0001725"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTILHDNLK"	"[K].dTILHDNLk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"509.63620"	"1526.89405"	"1526.89426"	"-0.14"	"-0.00007"	"9/78"	"9"	"78"	"1666655.79180908"	"HCD"	"MS2"	"11.47094"	"61.6"	"100.000"	"56.3403"	"17928"	"17928"	"17907"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"72.4"	""	"69.7"	""	"110.6"	""	"142.3"	"139.2"	""	"582"	"28"	"34.000"	"27.000"	"0.0509205386389775"	"18"	"0.0001991"	"0.00236"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"764.39740"	"1527.78752"	"1527.79645"	"-5.84"	"-0.00446"	"5/128"	"5"	"128"	"138795.777404785"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"72.3390"	"24416"	"24416"	"24386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.1"	""	"14.3"	""	"16.5"	""	"22.5"	""	"23.7"	"29.8"	""	"728"	"5"	"35.000"	"28.000"	"12.5055093035554"	"15"	"0.009275"	"0.12"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.39990"	"1527.79253"	"1527.79645"	"-2.57"	"-0.00196"	"7/128"	"7"	"128"	"149467.481628418"	"HCD"	"MS2"	"22.8287"	"11.6"	"100.000"	"58.1945"	"18682"	"18682"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.9"	""	"10.0"	""	"16.5"	""	"19.1"	""	"29.3"	"21.0"	""	"741"	"5"	"35.000"	"28.000"	"12.5253021814316"	"13"	"0.004959"	"0.06206"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40033"	"1527.79338"	"1527.79645"	"-2.01"	"-0.00153"	"9/128"	"9"	"128"	"341644.056396484"	"HCD"	"MS2"	"23.59651"	"23.8"	"100.000"	"67.6776"	"22496"	"22496"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"20.8"	""	"28.4"	""	"42.0"	""	"55.5"	"47.8"	""	"747"	"30"	"35.000"	"28.000"	"0.0350986656495893"	"14"	"0.0001991"	"0.002644"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"764.40057"	"1527.79387"	"1527.79645"	"-1.69"	"-0.00129"	"9/128"	"9"	"128"	"601110.911376953"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"56.4045"	"17954"	"17954"	"17932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.3"	""	"32.2"	""	"37.1"	""	"57.6"	"0.3"	"60.2"	"65.6"	""	"752"	"44"	"35.000"	"28.000"	"0.00146956176817943"	"23"	"0"	"4.377E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"764.40057"	"1527.79387"	"1527.79645"	"-1.69"	"-0.00129"	"10/128"	"10"	"128"	"1813381.49237061"	"HCD"	"MS2"	"0"	"67.9"	"100.000"	"56.7027"	"18073"	"18073"	"18063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.1"	""	"68.0"	""	"74.6"	""	"135.4"	"0.3"	"131.2"	"141.0"	""	"752"	"69"	"35.000"	"28.000"	"5.02559914221463E-06"	"25"	"0"	"4.109E-09"	"1.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNGPENWHK"	"[K].snGPENWHk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"509.93619"	"1527.79401"	"1527.79561"	"-1.05"	"-0.00053"	"10/86"	"10"	"86"	"4054986.73327637"	"HCD"	"MS2"	"15.55063"	"157.1"	"100.000"	"42.6925"	"12386"	"12386"	"12367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.5"	"2.7"	"190.4"	""	"194.6"	""	"279.4"	"0.0"	"286.8"	"272.7"	""	"752"	"26"	"35.000"	"28.000"	"0.0869336361106024"	"19"	"0"	"0.0003488"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40076"	"1527.79424"	"1527.79645"	"-1.45"	"-0.00111"	"11/128"	"11"	"128"	"345689.877563477"	"HCD"	"MS2"	"31.16287"	"32.3"	"100.000"	"69.0867"	"23101"	"23101"	"23077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"35.3"	""	"41.5"	""	"58.2"	""	"67.5"	"67.3"	""	"753"	"17"	"35.000"	"28.000"	"0.737505019575005"	"14"	"0.001951"	"0.01734"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SNGPENWHK"	"[K].snGPENWHk.[E]"	"N-Term(TMT6plex); N2(Deamidated); K9(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"509.93628"	"1527.79428"	"1527.79561"	"-0.87"	"-0.00044"	"10/86"	"10"	"86"	"3685333.34265137"	"HCD"	"MS2"	"21.12201"	"135.8"	"100.000"	"42.8491"	"12416"	"12416"	"12394"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"217.7"	""	"150.7"	""	"179.2"	""	"253.3"	""	"248.6"	"237.1"	""	"753"	"28"	"35.000"	"28.000"	"0.0607805996645172"	"14"	"0"	"0.0002189"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"764.40088"	"1527.79448"	"1527.79645"	"-1.29"	"-0.00098"	"7/128"	"7"	"128"	"354266.681213379"	"HCD"	"MS2"	"18.90896"	"23.8"	"100.000"	"67.3908"	"22411"	"22411"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.4"	""	"29.5"	""	"25.9"	""	"34.4"	"0.9"	"46.7"	"58.9"	""	"754"	"36"	"35.000"	"28.000"	"0.010600866130604"	"17"	"9.9E-05"	"0.0007762"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"5/128"	"5"	"128"	"211920.319152832"	"HCD"	"MS2"	"20.77704"	"14.0"	"100.000"	"69.8674"	"23419"	"23419"	"23388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"16.0"	""	"12.3"	""	"27.5"	""	"32.3"	"26.9"	""	"745"	"22"	"35.000"	"28.000"	"0.246108309382829"	"14"	"0.001348"	"0.0115"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"10/128"	"10"	"128"	"1942219.04943848"	"HCD"	"MS2"	"0"	"70.0"	"100.000"	"56.9972"	"18158"	"18158"	"18142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.0"	""	"73.8"	""	"81.9"	""	"137.2"	"0.3"	"140.3"	"146.2"	""	"745"	"69"	"35.000"	"28.000"	"4.843131678174E-06"	"24"	"0"	"3.778E-08"	"1.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8533"	"0.0000"	"1"	"1"	"1"	"764.40106"	"1527.79485"	"1527.79645"	"-1.05"	"-0.00080"	"11/128"	"11"	"128"	"3219654.99353027"	"HCD"	"MS2"	"0"	"121.2"	"100.000"	"64.8284"	"21340"	"21340"	"21323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.8"	""	"152.3"	""	"123.7"	""	"236.1"	""	"264.9"	"242.4"	""	"745"	"75"	"35.000"	"28.000"	"1.15644844657781E-06"	"28"	"0"	"4.168E-08"	"1.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8916"	"0.0000"	"1"	"1"	"1"	"509.93665"	"1527.79538"	"1527.79645"	"-0.70"	"-0.00036"	"18/128"	"18"	"128"	"129345339.373047"	"HCD"	"MS2"	"2.175011"	"79.1"	"9.545"	"63.9366"	"21011"	"21011"	"20995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.8"	""	"68.7"	""	"87.2"	""	"155.0"	""	"177.7"	"162.2"	""	"762"	"83"	"35.000"	"28.000"	"1.84894918561768E-07"	"27"	"0"	"8.537E-08"	"1.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8916"	"0.0000"	"1"	"1"	"1"	"509.93665"	"1527.79538"	"1527.79645"	"-0.70"	"-0.00036"	"18/128"	"18"	"128"	"53637088.9997559"	"HCD"	"MS2"	"2.250932"	"98.8"	"26.287"	"64.2276"	"21128"	"21128"	"21115"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.9"	""	"112.7"	""	"110.8"	""	"195.8"	"1.9"	"197.8"	"203.4"	""	"762"	"83"	"35.000"	"28.000"	"1.85321145368447E-07"	"26"	"0"	"5.391E-08"	"1.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8795"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"12/128"	"12"	"128"	"1393759.52734375"	"HCD"	"MS2"	"3.081969"	"77.5"	"100.000"	"68.2744"	"22737"	"22737"	"22716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"18.0"	""	"63.0"	""	"57.8"	""	"450.0"	"144.5"	""	"752"	"83"	"35.000"	"28.000"	"1.91067950402771E-07"	"27"	"0"	"3.433E-09"	"1.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9014"	"0.0000"	"1"	"1"	"1"	"764.40137"	"1527.79546"	"1527.79645"	"-0.65"	"-0.00050"	"12/128"	"12"	"128"	"1048250.75091553"	"HCD"	"MS2"	"4.548733"	"48.2"	"100.000"	"65.3931"	"21603"	"21603"	"21584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.8"	""	"44.8"	""	"58.7"	""	"86.3"	"0.8"	"106.3"	"102.1"	""	"752"	"71"	"35.000"	"28.000"	"3.2823723451393E-06"	"23"	"0"	"1.007E-07"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8987"	"0.0000"	"1"	"1"	"1"	"509.93671"	"1527.79557"	"1527.79645"	"-0.58"	"-0.00029"	"18/128"	"18"	"128"	"139105850.504395"	"HCD"	"MS2"	"2.535789"	"76.0"	"8.773"	"63.9495"	"20985"	"20985"	"20970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.1"	""	"68.7"	""	"89.4"	""	"162.8"	""	"154.6"	"153.7"	""	"746"	"79"	"35.000"	"28.000"	"4.4229174306635E-07"	"26"	"0"	"6.599E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.7073"	"0.0000"	"1"	"1"	"1"	"509.93674"	"1527.79566"	"1527.79645"	"-0.52"	"-0.00026"	"9/128"	"9"	"128"	"1085007.72235107"	"HCD"	"MS2"	"6.515228"	"29.3"	"100.000"	"65.1351"	"21498"	"21498"	"21477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"42.2"	""	"38.1"	""	"41.5"	"0.3"	"55.6"	"68.8"	""	"746"	"41"	"35.000"	"28.000"	"0.00316015825474442"	"27"	"0.0001686"	"0.001846"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"9/128"	"9"	"128"	"784041.266052246"	"HCD"	"MS2"	"46.85788"	"44.6"	"100.000"	"66.2333"	"21946"	"21946"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.4"	""	"49.1"	""	"51.2"	""	"75.5"	"1.8"	"89.9"	"88.6"	""	"757"	"40"	"35.000"	"28.000"	"0.00341244675583854"	"17"	"0"	"1.531E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"12/128"	"12"	"128"	"1061541.01989746"	"HCD"	"MS2"	"0"	"49.4"	"100.000"	"65.4333"	"21586"	"21586"	"21567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"53.9"	""	"57.5"	""	"95.0"	"1.9"	"103.1"	"93.5"	""	"757"	"69"	"35.000"	"28.000"	"5.14121639533237E-06"	"20"	"0"	"1.512E-08"	"1.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9589"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"12/128"	"12"	"128"	"1653416.52862549"	"HCD"	"MS2"	"3.533557"	"69.2"	"100.000"	"65.0915"	"21480"	"21480"	"21463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.7"	""	"80.4"	""	"68.6"	""	"133.1"	"0.0"	"139.6"	"148.6"	""	"757"	"73"	"35.000"	"28.000"	"1.84529533504131E-06"	"20"	"0"	"1.122E-07"	"1.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8873"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"12/128"	"12"	"128"	"1587274.31848145"	"HCD"	"MS2"	"0"	"71.0"	"100.000"	"65.1181"	"21458"	"21458"	"21441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.6"	""	"76.4"	""	"77.9"	""	"137.4"	""	"148.0"	"144.3"	""	"757"	"71"	"35.000"	"28.000"	"3.26637380329798E-06"	"25"	"0"	"4.83E-08"	"1.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9054"	"0.0000"	"1"	"1"	"1"	"764.40155"	"1527.79582"	"1527.79645"	"-0.41"	"-0.00031"	"11/128"	"11"	"128"	"3300585.35198975"	"HCD"	"MS2"	"0.7315199"	"129.7"	"100.000"	"64.8064"	"21364"	"21364"	"21351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.0"	""	"160.8"	""	"137.0"	""	"235.4"	""	"284.0"	"266.3"	""	"757"	"74"	"35.000"	"28.000"	"1.69069739629139E-06"	"24"	"0"	"4.045E-09"	"1.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"6/128"	"6"	"128"	"330680.982849121"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"67.0351"	"22235"	"22235"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"23.1"	""	"28.4"	""	"37.8"	""	"42.0"	"42.7"	""	"760"	"25"	"35.000"	"28.000"	"0.111117790358047"	"17"	"0.001261"	"0.01002"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"11/128"	"11"	"128"	"20113099.1162109"	"HCD"	"MS2"	"0"	"221.3"	"30.261"	"64.5102"	"21244"	"21244"	"21227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"268.9"	""	"206.0"	""	"256.6"	""	"434.4"	""	"478.3"	"462.3"	""	"760"	"74"	"35.000"	"28.000"	"1.65494512000516E-06"	"21"	"0"	"3.408E-08"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"764.40161"	"1527.79595"	"1527.79645"	"-0.33"	"-0.00025"	"12/128"	"12"	"128"	"17933440.5596924"	"HCD"	"MS2"	"0"	"224.2"	"35.224"	"64.5298"	"21218"	"21218"	"21203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"272.8"	""	"217.0"	""	"230.3"	""	"453.9"	""	"487.7"	"470.1"	""	"760"	"77"	"35.000"	"28.000"	"7.44360975932276E-07"	"24"	"0"	"7.217E-09"	"1.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"764.40167"	"1527.79607"	"1527.79645"	"-0.25"	"-0.00019"	"13/128"	"13"	"128"	"426233.008911133"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"68.5856"	"22864"	"22864"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"14.7"	""	"24.5"	""	"29.7"	""	"121.5"	"53.3"	""	"760"	"44"	"35.000"	"28.000"	"0.00151280724810329"	"17"	"9.9E-05"	"0.0004536"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"509.93701"	"1527.79648"	"1527.79645"	"0.02"	"0.00001"	"9/128"	"9"	"128"	"1031742.0994873"	"HCD"	"MS2"	"8.077537"	"30.2"	"100.000"	"65.1824"	"21484"	"21484"	"21457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.8"	""	"43.0"	""	"44.6"	""	"45.3"	"1.3"	"50.4"	"62.4"	""	"756"	"40"	"35.000"	"28.000"	"0.00360987197516103"	"20"	"0"	"0.0002705"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40192"	"1527.79656"	"1527.79645"	"0.07"	"0.00005"	"9/128"	"9"	"128"	"464789.338317871"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"68.6605"	"22927"	"22927"	"22906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"14.5"	""	"21.2"	""	"28.1"	""	"114.5"	"58.9"	""	"755"	"44"	"35.000"	"28.000"	"0.00142862075730703"	"16"	"0"	"0.0003013"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8841"	"0.0000"	"1"	"1"	"1"	"509.93704"	"1527.79657"	"1527.79645"	"0.08"	"0.00004"	"19/128"	"19"	"128"	"47398647.2540283"	"HCD"	"MS2"	"1.604847"	"138.2"	"38.803"	"63.6585"	"20867"	"20867"	"20850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.8"	""	"144.6"	""	"151.5"	""	"275.4"	"0.0"	"282.1"	"277.8"	""	"755"	"69"	"35.000"	"28.000"	"4.4659818728625E-06"	"25"	"0"	"7.416E-07"	"1.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9012"	"0.0000"	"1"	"1"	"1"	"509.93707"	"1527.79667"	"1527.79645"	"0.14"	"0.00007"	"18/128"	"18"	"128"	"54783028.4477539"	"HCD"	"MS2"	"2.41537"	"88.6"	"22.717"	"64.2473"	"21103"	"21103"	"21085"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.2"	""	"93.0"	""	"107.0"	""	"172.0"	"1.3"	"179.6"	"176.5"	""	"755"	"81"	"35.000"	"28.000"	"2.99169252256378E-07"	"26"	"0"	"2.804E-07"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"764.40204"	"1527.79680"	"1527.79645"	"0.23"	"0.00017"	"5/128"	"5"	"128"	"158841.73626709"	"HCD"	"MS2"	"25.16064"	"12.0"	"100.000"	"74.5223"	"25274"	"25274"	"25246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"14.1"	""	"14.8"	""	"22.9"	""	"26.6"	"25.4"	""	"752"	"6"	"35.000"	"28.000"	"9.59815689800628"	"17"	"0.00511"	"0.06453"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9518"	"0.0000"	"1"	"1"	"1"	"764.40210"	"1527.79692"	"1527.79645"	"0.31"	"0.00024"	"12/128"	"12"	"128"	"1363167.69329834"	"HCD"	"MS2"	"0"	"72.9"	"100.000"	"68.3421"	"22797"	"22797"	"22778"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.4"	""	"28.4"	""	"51.1"	""	"59.5"	""	"414.5"	"138.7"	""	"754"	"83"	"35.000"	"28.000"	"1.71925917313639E-07"	"21"	"0"	"4.726E-09"	"1.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9324"	"0.0000"	"1"	"1"	"1"	"764.40222"	"1527.79717"	"1527.79645"	"0.47"	"0.00036"	"12/128"	"12"	"128"	"146873288.560547"	"HCD"	"MS2"	"0"	"279.5"	"5.474"	"64.2231"	"21127"	"21127"	"21115"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"355.9"	""	"261.9"	""	"303.4"	""	"546.7"	""	"606.6"	"584.0"	""	"759"	"74"	"35.000"	"28.000"	"1.63761489656137E-06"	"22"	"0"	"3.376E-08"	"1.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"509.93729"	"1527.79731"	"1527.79645"	"0.56"	"0.00029"	"19/128"	"19"	"128"	"43052491.7027588"	"HCD"	"MS2"	"1.671893"	"126.3"	"41.554"	"63.6365"	"20890"	"20890"	"20873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"153.3"	""	"132.3"	""	"144.9"	""	"257.1"	"2.0"	"265.2"	"244.9"	""	"771"	"70"	"35.000"	"28.000"	"4.12120655940335E-06"	"22"	"0"	"1.61E-07"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40247"	"1527.79766"	"1527.79645"	"0.79"	"0.00060"	"15/128"	"15"	"128"	"312979.312316895"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"67.0614"	"22277"	"22277"	"22258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	""	"23.6"	""	"18.6"	""	"39.3"	""	"44.2"	"36.9"	""	"768"	"56"	"35.000"	"28.000"	"8.77669940496165E-05"	"16"	"0"	"0.0001012"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"764.40247"	"1527.79766"	"1527.79645"	"0.79"	"0.00060"	"6/128"	"6"	"128"	"333997.466003418"	"HCD"	"MS2"	"27.12108"	"30.4"	"100.000"	"68.9909"	"23028"	"23028"	"23001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.7"	""	"34.1"	""	"38.6"	""	"55.2"	""	"60.2"	"61.7"	""	"768"	"13"	"35.000"	"28.000"	"2.14946918974122"	"16"	"0.002419"	"0.02283"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"764.40253"	"1527.79778"	"1527.79645"	"0.87"	"0.00066"	"7/128"	"7"	"128"	"195173.850769043"	"HCD"	"MS2"	"45.84151"	"16.0"	"100.000"	"69.6145"	"23282"	"23282"	"23251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"17.5"	""	"20.5"	""	"32.8"	"1.1"	"24.7"	"27.1"	""	"768"	"39"	"35.000"	"28.000"	"0.0048790045640008"	"18"	"0.0001686"	"0.001516"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"509.93747"	"1527.79786"	"1527.79645"	"0.92"	"0.00047"	"16/128"	"16"	"128"	"10620737.2984009"	"HCD"	"MS2"	"3.930975"	"163.3"	"93.546"	"64.5169"	"21246"	"21246"	"21227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.1"	""	"282.7"	""	"277.0"	""	"155.1"	"4.8"	"289.3"	"341.9"	""	"767"	"60"	"35.000"	"28.000"	"3.73048560318466E-05"	"26"	"0"	"2.185E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"764.40265"	"1527.79802"	"1527.79645"	"1.03"	"0.00079"	"12/128"	"12"	"128"	"362503.24432373"	"HCD"	"MS2"	"14.73246"	"25.5"	"100.000"	"67.6926"	"22533"	"22533"	"22509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"31.8"	""	"31.5"	""	"38.5"	""	"55.9"	"50.5"	""	"732"	"33"	"35.000"	"28.000"	"0.0189008391153578"	"20"	"0.0001991"	"0.003351"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8933"	"0.0000"	"1"	"1"	"1"	"764.40277"	"1527.79827"	"1527.79645"	"1.19"	"0.00091"	"11/128"	"11"	"128"	"362217733.261719"	"HCD"	"MS2"	"0"	"300.9"	"2.418"	"63.9322"	"21010"	"21010"	"20995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"377.4"	""	"298.6"	""	"327.7"	""	"595.0"	"1.8"	"633.1"	"624.9"	""	"734"	"75"	"35.000"	"28.000"	"1.10323000306456E-06"	"25"	"0"	"1.494E-07"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"764.40283"	"1527.79839"	"1527.79645"	"1.27"	"0.00097"	"9/128"	"9"	"128"	"519216.512695313"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"56.7061"	"18040"	"18040"	"18020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.1"	""	"31.9"	""	"31.9"	""	"59.4"	""	"70.5"	"62.2"	""	"734"	"32"	"35.000"	"28.000"	"0.0214617960881024"	"19"	"0.0001991"	"0.002109"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9467"	"0.0000"	"1"	"1"	"1"	"764.40289"	"1527.79851"	"1527.79645"	"1.35"	"0.00103"	"12/128"	"12"	"128"	"395674566.166016"	"HCD"	"MS2"	"0"	"311.2"	"2.165"	"63.9151"	"20971"	"20971"	"20958"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"400.5"	""	"299.4"	""	"333.7"	""	"630.6"	"3.5"	"667.4"	"621.4"	""	"740"	"75"	"35.000"	"28.000"	"1.20005658419259E-06"	"21"	"0"	"5.421E-08"	"1.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"764.40308"	"1527.79888"	"1527.79645"	"1.59"	"0.00121"	"11/128"	"11"	"128"	"66105616.2678223"	"HCD"	"MS2"	"0"	"408.6"	"17.381"	"63.6194"	"20851"	"20851"	"20834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"560.8"	""	"421.3"	""	"441.4"	""	"838.6"	"4.4"	"825.6"	"785.1"	""	"738"	"75"	"35.000"	"28.000"	"1.15884770804032E-06"	"23"	"0"	"2.669E-07"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"764.40314"	"1527.79900"	"1527.79645"	"1.67"	"0.00127"	"12/128"	"12"	"128"	"58735211.9106445"	"HCD"	"MS2"	"0"	"276.5"	"20.878"	"63.5974"	"20874"	"20874"	"20857"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"341.1"	""	"334.9"	""	"348.0"	""	"513.0"	""	"555.4"	"536.1"	""	"738"	"58"	"35.000"	"28.000"	"5.76801480134512E-05"	"20"	"0"	"3.845E-07"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.40320"	"1527.79912"	"1527.79645"	"1.75"	"0.00133"	"7/128"	"7"	"128"	"345293.614074707"	"HCD"	"MS2"	"8.977156"	"22.8"	"100.000"	"67.3667"	"22370"	"22370"	"22343"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.9"	""	"23.4"	""	"26.1"	""	"39.3"	""	"47.5"	"51.8"	""	"738"	"36"	"35.000"	"28.000"	"0.00899552191978069"	"15"	"0.0001991"	"0.003011"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"764.40332"	"1527.79936"	"1527.79645"	"1.91"	"0.00146"	"11/128"	"11"	"128"	"135446690.098633"	"HCD"	"MS2"	"0"	"281.0"	"6.342"	"64.2429"	"21102"	"21102"	"21085"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.9"	""	"261.0"	""	"308.5"	""	"569.4"	"3.1"	"609.2"	"587.3"	""	"740"	"75"	"35.000"	"28.000"	"1.10969013202543E-06"	"23"	"0"	"9.746E-08"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vNPDDVGGEALGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"509.93811"	"1527.79978"	"1527.79645"	"2.18"	"0.00111"	"16/128"	"16"	"128"	"8966723.26208496"	"HCD"	"MS2"	"4.995829"	"161.2"	"100.000"	"64.5643"	"21232"	"21232"	"21217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.7"	""	"303.5"	""	"283.5"	""	"131.4"	"6.3"	"280.2"	"334.3"	""	"727"	"60"	"35.000"	"28.000"	"3.56044609696062E-05"	"27"	"0"	"1.851E-06"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELNGITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"509.94836"	"1527.83054"	"1527.83284"	"-1.50"	"-0.00077"	"13/118"	"13"	"118"	"1307400.78527832"	"HCD"	"MS2"	"25.9818"	"31.9"	"100.000"	"66.0542"	"21873"	"21873"	"21846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.9"	""	"25.6"	""	"28.7"	""	"35.0"	""	"42.1"	"145.2"	""	"839"	"36"	"36.000"	"29.000"	"0.0109580168817047"	"18"	"9.9E-05"	"0.0005869"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELNGITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"764.41962"	"1527.83196"	"1527.83284"	"-0.58"	"-0.00044"	"11/118"	"11"	"118"	"2184484.30792236"	"HCD"	"MS2"	"21.34546"	"98.0"	"100.000"	"65.9601"	"21834"	"21834"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.3"	""	"115.0"	""	"135.8"	""	"161.1"	""	"158.1"	"189.2"	""	"818"	"57"	"36.000"	"29.000"	"8.98924687968994E-05"	"20"	"0"	"7.46E-08"	"1.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELNGITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"509.94888"	"1527.83210"	"1527.83284"	"-0.48"	"-0.00025"	"13/118"	"13"	"118"	"1258046.21569824"	"HCD"	"MS2"	"23.50666"	"27.7"	"100.000"	"65.9379"	"21792"	"21792"	"21769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.1"	""	"29.8"	""	"32.0"	""	"42.2"	"0.0"	"45.5"	"78.8"	""	"817"	"35"	"36.000"	"29.000"	"0.0120834809258631"	"20"	"0"	"9.097E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELNGITR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"764.42017"	"1527.83306"	"1527.83284"	"0.14"	"0.00011"	"11/118"	"11"	"118"	"2101677.57147217"	"HCD"	"MS2"	"28.50666"	"94.8"	"100.000"	"65.8870"	"21771"	"21771"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"151.6"	""	"118.0"	""	"133.2"	""	"152.3"	"0.4"	"153.1"	"188.3"	""	"825"	"60"	"36.000"	"29.000"	"4.28967068404487E-05"	"19"	"0"	"1.729E-07"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNPDDVGGEALGR"	"[K].vnPDDVGGEALGR.[L]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"0"	"2"	"2"	"0.9737"	"0.0000"	"1"	"1"	"1"	"764.90088"	"1528.79448"	"1528.78047"	"9.17"	"0.00701"	"11/128"	"11"	"128"	"850110.221313477"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"56.7680"	"18065"	"18065"	"18043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.4"	""	"56.3"	""	"51.3"	""	"80.9"	"1.4"	"90.6"	"88.3"	""	"719"	"38"	"35.000"	"28.000"	"0.00620438722170478"	"16"	"0.004751"	"0.05589"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAK"	"[K].yFGGTDDPAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"764.90582"	"1528.80437"	"1528.80478"	"-0.27"	"-0.00021"	"7/76"	"7"	"76"	"1145050.44464111"	"HCD"	"MS2"	"0"	"107.5"	"100.000"	"63.1251"	"20681"	"20681"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.4"	""	"151.5"	""	"141.5"	""	"217.9"	""	"169.8"	"193.7"	""	"781"	"41"	"35.000"	"28.000"	"0.00327055184670548"	"24"	"0"	"0.0001757"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAK"	"[K].yFGGTDDPAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"510.27316"	"1528.80494"	"1528.80478"	"0.10"	"0.00005"	"7/76"	"7"	"76"	"10887527.6459961"	"HCD"	"MS2"	"3.890859"	"293.8"	"100.000"	"63.2957"	"20751"	"20751"	"20734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"389.9"	""	"388.3"	""	"412.9"	""	"561.1"	""	"477.9"	"552.7"	""	"791"	"38"	"35.000"	"28.000"	"0.00606941016697121"	"21"	"0"	"0.0003414"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAK"	"[K].yFGGTDDPAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7708"	"0.0000"	"1"	"1"	"1"	"764.90619"	"1528.80510"	"1528.80478"	"0.21"	"0.00016"	"8/76"	"8"	"76"	"18608535.315918"	"HCD"	"MS2"	"0"	"676.9"	"48.154"	"63.4132"	"20799"	"20799"	"20782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"903.4"	""	"843.5"	""	"934.1"	""	"1312.9"	""	"1117.6"	"1299.9"	""	"791"	"48"	"35.000"	"28.000"	"0.000591761201985348"	"26"	"0"	"5.39E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAK"	"[K].yFGGTDDPAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"764.90643"	"1528.80559"	"1528.80478"	"0.53"	"0.00040"	"8/76"	"8"	"76"	"2814976.6875"	"HCD"	"MS2"	"0"	"228.0"	"100.000"	"63.2212"	"20688"	"20688"	"20668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"311.9"	""	"302.9"	""	"315.6"	""	"436.8"	""	"351.9"	"439.7"	""	"794"	"50"	"35.000"	"28.000"	"0.00036040475048074"	"26"	"0"	"1.259E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAK"	"[K].yFGGTDDPAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"510.27393"	"1528.80722"	"1528.80478"	"1.60"	"0.00081"	"7/76"	"7"	"76"	"14629791.6387939"	"HCD"	"MS2"	"4.222203"	"405.5"	"100.000"	"63.3663"	"20748"	"20748"	"20731"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"534.5"	""	"502.5"	""	"566.8"	""	"791.3"	""	"662.3"	"784.3"	""	"793"	"37"	"35.000"	"28.000"	"0.00796605300199361"	"21"	"0.0001686"	"0.001392"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"764.91083"	"1528.81438"	"1528.81685"	"-1.62"	"-0.00124"	"10/118"	"10"	"118"	"215459.844238281"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"61.7658"	"20130"	"20130"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"14.1"	""	"23.5"	""	"29.6"	""	"24.5"	"32.0"	""	"851"	"19"	"36.000"	"29.000"	"0.524686106538901"	"15"	"0.0008247"	"0.007665"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"764.91223"	"1528.81719"	"1528.81685"	"0.22"	"0.00017"	"11/118"	"11"	"118"	"304199.619445801"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"62.1821"	"20265"	"20265"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.2"	""	"34.0"	""	"30.1"	""	"29.3"	""	"41.0"	"34.1"	""	"852"	"22"	"36.000"	"29.000"	"0.263881897982709"	"21"	"0.001348"	"0.01109"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"764.91254"	"1528.81780"	"1528.81685"	"0.62"	"0.00047"	"14/118"	"14"	"118"	"275374.475219727"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"62.0929"	"20262"	"20262"	"20239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.0"	""	"19.3"	""	"22.8"	""	"27.4"	""	"27.9"	"37.8"	""	"870"	"34"	"36.000"	"29.000"	"0.0169624764204296"	"19"	"0.0001686"	"0.00183"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"764.91309"	"1528.81890"	"1528.81685"	"1.34"	"0.00102"	"10/118"	"10"	"118"	"298465.849853516"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"61.8672"	"20138"	"20138"	"20115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"29.1"	""	"23.7"	""	"37.7"	""	"35.4"	"37.5"	""	"858"	"17"	"36.000"	"29.000"	"0.811815412398694"	"17"	"0.001488"	"0.01278"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGDPQELNGITR"	"[K].vGDPQELnGITR.[S]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6129"	"0.0000"	"1"	"1"	"1"	"764.91467"	"1528.82207"	"1528.81685"	"3.41"	"0.00261"	"7/118"	"7"	"118"	"243718.717224121"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"73.4533"	"24840"	"24840"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"21.4"	""	"14.6"	""	"27.5"	""	"27.1"	"27.2"	""	"864"	"31"	"36.000"	"29.000"	"0.0314400875559908"	"18"	"0.001348"	"0.01055"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQLSDSTK"	"[R].eYQLSDSTk.[Y]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"764.91632"	"1528.82536"	"1528.82591"	"-0.36"	"-0.00027"	"13/90"	"13"	"90"	"590049.807250977"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"50.5093"	"15562"	"15562"	"15539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.1"	""	"63.3"	""	"64.5"	""	"101.6"	"1.2"	"112.5"	"121.9"	""	"888"	"45"	"36.000"	"29.000"	"0.00129533759421652"	"22"	"0"	"5.3E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGLNAFYK"	"[K].eEGLNAFYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.92395"	"1528.84062"	"1528.84117"	"-0.35"	"-0.00027"	"7/74"	"7"	"74"	"316516.490966797"	"HCD"	"MS2"	"49.74391"	"28.6"	"100.000"	"89.8048"	"31481"	"31481"	"31460"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"30.5"	""	"34.4"	""	"51.2"	""	"60.2"	"71.0"	""	"849"	"10"	"36.000"	"29.000"	"3.82716947913728"	"13"	"0.001049"	"0.008653"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGLNAFYK"	"[K].eEGLNAFYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.5098"	"0.0000"	"1"	"1"	"1"	"764.92456"	"1528.84184"	"1528.84117"	"0.44"	"0.00034"	"8/74"	"8"	"74"	"549828.830932617"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"90.0702"	"31587"	"31587"	"31577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.2"	""	"61.4"	""	"62.3"	""	"100.5"	""	"139.4"	"138.6"	""	"830"	"51"	"36.000"	"29.000"	"0.000369018463911049"	""	"0"	"1.271E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGLNAFYK"	"[K].eEGLNAFYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.5897"	"0.0000"	"1"	"1"	"1"	"764.92468"	"1528.84209"	"1528.84117"	"0.60"	"0.00046"	"13/74"	"13"	"74"	"389246.395812988"	"HCD"	"MS2"	"5.143374"	"37.6"	"100.000"	"90.2854"	"31635"	"31635"	"31617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"36.8"	""	"46.1"	""	"57.9"	"1.4"	"83.9"	"94.1"	""	"826"	"39"	"36.000"	"29.000"	"0.0052354022059929"	""	"0"	"0.000381"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDLPEELVSR"	"[R].eLDLPEELVSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"764.92487"	"1528.84245"	"1528.84200"	"0.29"	"0.00023"	"5/98"	"5"	"98"	"93929.344543457"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"109.2144"	"39203"	"39203"	"39194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.5"	""	"4.1"	""	"3.9"	""	"9.4"	""	"8.3"	"10.1"	""	"810"	"17"	"36.000"	"29.000"	"0.838407246260372"	"20"	"0.002189"	"0.02054"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGLNAFYK"	"[K].eEGLNAFYk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.5952"	"0.0000"	"1"	"1"	"1"	"764.92493"	"1528.84258"	"1528.84117"	"0.92"	"0.00071"	"13/74"	"13"	"74"	"425303.705444336"	"HCD"	"MS2"	"10.17232"	"43.2"	"100.000"	"89.9860"	"31514"	"31514"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.9"	""	"46.8"	""	"53.2"	""	"75.7"	"0.2"	"93.3"	"95.8"	""	"808"	"42"	"36.000"	"29.000"	"0.00265082687586374"	""	"0"	"0.0001572"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELDLPEELVSR"	"[R].eLDLPEELVSR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"Q4V7C6"	"GMP synthase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Gmps PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"764.92773"	"1528.84819"	"1528.84200"	"4.05"	"0.00309"	"8/98"	"8"	"98"	"161137.50604248"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"109.2256"	"39223"	"39223"	"39213"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"5.1"	""	"6.8"	""	"15.6"	""	"10.7"	"12.6"	""	"839"	"17"	"36.000"	"29.000"	"0.872432760240001"	"20"	"0.001951"	"0.01626"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSTYWEGK"	"[K].nSSTYWEGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.40240"	"1529.79753"	"1529.80003"	"-1.63"	"-0.00125"	"9/90"	"9"	"90"	"595432.975097656"	"HCD"	"MS2"	"0"	"61.8"	"100.000"	"55.4542"	"17539"	"17539"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.9"	""	"78.4"	""	"89.0"	""	"92.0"	""	"121.2"	"118.4"	""	"783"	"17"	"35.000"	"28.000"	"0.766887689677595"	"14"	"0.0001991"	"0.005171"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSSTYWEGK"	"[K].nSSTYWEGk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"Q5XHY5"	"Threonine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Tars PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"765.40302"	"1529.79875"	"1529.80003"	"-0.83"	"-0.00064"	"8/90"	"8"	"90"	"858464.417053223"	"HCD"	"MS2"	"0"	"91.1"	"100.000"	"55.1530"	"17450"	"17450"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.9"	""	"122.1"	""	"122.4"	""	"140.7"	"0.2"	"170.4"	"175.7"	""	"826"	"53"	"36.000"	"29.000"	"0.000213279960509365"	"21"	"0"	"2.055E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVATDALGALEAR"	"[K].nVATDALGALEAR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI60"	"Receptor expression-enhancing protein 6 OS=Rattus norvegicus OX=10116 GN=Reep6 PE=2 SV=1"	"Q5XI60"	"Receptor expression-enhancing protein 6 OS=Rattus norvegicus OX=10116 GN=Reep6 PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"765.42725"	"1529.84722"	"1529.84849"	"-0.83"	"-0.00064"	"5/134"	"5"	"134"	"95730.1436767578"	"HCD"	"MS2"	"32.4097"	"8.7"	"100.000"	"102.0910"	"36437"	"36437"	"36414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"11.2"	""	"12.6"	""	"12.4"	""	"14.8"	"19.4"	""	"966"	"12"	"36.000"	"29.000"	"2.8638293177214"	"17"	"0.001999"	"0.01757"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQLANVEAK"	"[K].aQQLANVEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"765.45538"	"1529.90349"	"1529.90516"	"-1.09"	"-0.00084"	"9/88"	"9"	"88"	"658936.840576172"	"HCD"	"MS2"	"47.28229"	"65.1"	"100.000"	"54.9463"	"17332"	"17332"	"17303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.0"	""	"78.5"	""	"93.0"	""	"65.1"	""	"161.0"	"126.5"	""	"744"	"65"	"35.000"	"28.000"	"1.14694591749276E-05"	"28"	"0"	"1.218E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQLANVEAK"	"[K].aQQLANVEAk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"765.45557"	"1529.90386"	"1529.90516"	"-0.85"	"-0.00065"	"9/88"	"9"	"88"	"738800.677429199"	"HCD"	"MS2"	"47.55056"	"72.3"	"100.000"	"54.6749"	"17255"	"17255"	"17236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.9"	""	"79.7"	""	"105.6"	""	"88.4"	"0.3"	"164.2"	"128.0"	""	"744"	"55"	"35.000"	"28.000"	"0.000131081964027805"	"26"	"0"	"5.524E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHIR"	"[K].hTNYTMEHIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.92697"	"1530.76636"	"1530.76846"	"-1.37"	"-0.00070"	"9/96"	"9"	"96"	"2807522.98492432"	"HCD"	"MS2"	"24.86151"	"102.9"	"100.000"	"24.3255"	"4998"	"4998"	"4978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.1"	""	"135.3"	""	"129.9"	""	"152.8"	"1.3"	"201.8"	"215.1"	""	"634"	"36"	"35.000"	"28.000"	"0.00790786528440917"	"15"	"0"	"7.472E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHLR"	"[K].hTNYTMEHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.92697"	"1530.76636"	"1530.76846"	"-1.37"	"-0.00070"	"9/96"	"9"	"96"	"2807522.98492432"	"HCD"	"MS2"	"24.86151"	"102.9"	"100.000"	"24.3255"	"4998"	"4998"	"4978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.1"	""	"135.3"	""	"129.9"	""	"152.8"	"1.3"	"201.8"	"215.1"	""	"634"	"36"	"35.000"	"28.000"	"0.00790786528440917"	"15"	"0"	"7.472E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHIR"	"[K].hTNYTMEHIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.92712"	"1530.76682"	"1530.76846"	"-1.07"	"-0.00055"	"9/96"	"9"	"96"	"3109397.72155762"	"HCD"	"MS2"	"26.65187"	"107.8"	"100.000"	"24.4314"	"5004"	"5004"	"4982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.2"	""	"144.3"	""	"131.4"	""	"187.8"	"1.7"	"208.8"	"210.4"	""	"641"	"43"	"35.000"	"28.000"	"0.00161000799941925"	"15"	"0"	"4.194E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHLR"	"[K].hTNYTMEHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.92712"	"1530.76682"	"1530.76846"	"-1.07"	"-0.00055"	"9/96"	"9"	"96"	"3109397.72155762"	"HCD"	"MS2"	"26.65187"	"107.8"	"100.000"	"24.4314"	"5004"	"5004"	"4982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.2"	""	"144.3"	""	"131.4"	""	"187.8"	"1.7"	"208.8"	"210.4"	""	"641"	"43"	"35.000"	"28.000"	"0.00161000799941925"	"15"	"0"	"4.194E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHIR"	"[K].hTNYTMEHIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.92722"	"1530.76709"	"1530.76846"	"-0.89"	"-0.00046"	"9/96"	"9"	"96"	"3408168.66809082"	"HCD"	"MS2"	"14.17517"	"85.6"	"100.000"	"25.2638"	"5338"	"5338"	"5318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.3"	""	"108.1"	""	"104.5"	""	"128.2"	""	"178.1"	"179.0"	""	"647"	"50"	"35.000"	"28.000"	"0.000333329909962863"	"16"	"0"	"1.906E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHLR"	"[K].hTNYTMEHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.92722"	"1530.76709"	"1530.76846"	"-0.89"	"-0.00046"	"9/96"	"9"	"96"	"3408168.66809082"	"HCD"	"MS2"	"14.17517"	"85.6"	"100.000"	"25.2638"	"5338"	"5338"	"5318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.3"	""	"108.1"	""	"104.5"	""	"128.2"	""	"178.1"	"179.0"	""	"647"	"50"	"35.000"	"28.000"	"0.000333329909962863"	"16"	"0"	"1.906E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHIR"	"[K].hTNYTMEHIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"510.92740"	"1530.76764"	"1530.76846"	"-0.54"	"-0.00027"	"9/96"	"9"	"96"	"3400773.47369385"	"HCD"	"MS2"	"18.81607"	"87.4"	"100.000"	"25.1236"	"5319"	"5319"	"5304"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.5"	""	"108.3"	""	"117.6"	""	"135.2"	""	"172.3"	"170.9"	""	"643"	"51"	"35.000"	"28.000"	"0.000243882690371882"	"17"	"0"	"2.949E-06"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTNYTMEHLR"	"[K].hTNYTMEHLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"510.92740"	"1530.76764"	"1530.76846"	"-0.54"	"-0.00027"	"9/96"	"9"	"96"	"3400773.47369385"	"HCD"	"MS2"	"18.81607"	"87.4"	"100.000"	"25.1236"	"5319"	"5319"	"5304"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.5"	""	"108.3"	""	"117.6"	""	"135.2"	""	"172.3"	"170.9"	""	"643"	"51"	"35.000"	"28.000"	"0.000243882690371882"	"17"	"0"	"2.949E-06"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAmAEk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.89661"	"1530.78594"	"1530.78742"	"-0.97"	"-0.00074"	"8/92"	"8"	"92"	"509828.055419922"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"36.3531"	"9783"	"9783"	"9769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.3"	""	"42.0"	""	"41.5"	""	"90.1"	""	"68.4"	"74.6"	""	"802"	"38"	"36.000"	"29.000"	"0.00653347709088528"	"15"	"0.001103"	"0.009203"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].NPWGQVEWTGk.[W]"	"K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"765.89758"	"1530.78789"	"1530.79024"	"-1.54"	"-0.00118"	"6/104"	"6"	"104"	"116457.90423584"	"HCD"	"MS2"	"24.51404"	"8.1"	"100.000"	"93.2657"	"32836"	"32836"	"32813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"9.4"	""	"8.9"	""	"12.1"	""	"14.6"	"19.1"	""	"806"	"32"	"36.000"	"29.000"	"0.0237851035309253"	"15"	"0.001951"	"0.01721"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQYEAMAEK"	"[R].sQYEAmAEk.[N]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"765.89795"	"1530.78862"	"1530.78742"	"0.79"	"0.00060"	"8/92"	"8"	"92"	"347298.894958496"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"36.1839"	"9753"	"9753"	"9731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.2"	""	"23.6"	""	"36.6"	""	"53.4"	""	"41.6"	"49.4"	""	"833"	"31"	"36.000"	"29.000"	"0.0353683667852625"	"15"	"0.001049"	"0.00873"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPWGQVEWTGK"	"[R].NPWGQVEWTGk.[W]"	"K11(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"765.89923"	"1530.79119"	"1530.79024"	"0.62"	"0.00047"	"6/104"	"6"	"104"	"122742.158203125"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"93.2290"	"32858"	"32858"	"32832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"12.5"	""	"8.0"	""	"14.5"	""	"18.9"	"15.1"	""	"865"	"38"	"36.000"	"29.000"	"0.00716120509200571"	"22"	"0.001951"	"0.01719"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELVSNLGTIAR"	"[K].eELVSNLGTIAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"765.93762"	"1530.86797"	"1530.86889"	"-0.60"	"-0.00046"	"6/116"	"6"	"116"	"155966.073608398"	"HCD"	"MS2"	"26.97357"	"12.5"	"100.000"	"95.8238"	"33874"	"33874"	"33850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"15.3"	""	"14.5"	""	"25.2"	""	"23.3"	"21.6"	""	"907"	"25"	"36.000"	"29.000"	"0.156162693601174"	"22"	"0.0001991"	"0.00219"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EELVSNLGTIAR"	"[K].eELVSNLGTIAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"765.93835"	"1530.86943"	"1530.86889"	"0.36"	"0.00027"	"5/116"	"5"	"116"	"135468.760070801"	"HCD"	"MS2"	"34.65349"	"11.3"	"100.000"	"95.8419"	"33914"	"33914"	"33891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"18.1"	""	"15.9"	""	"17.6"	""	"20.4"	"21.5"	""	"901"	"23"	"36.000"	"29.000"	"0.221663810824494"	"21"	"0.000885"	"0.007767"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAANAEDIK"	"[K].lQAANAEDIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"765.94733"	"1530.88738"	"1530.88918"	"-1.18"	"-0.00090"	"13/90"	"13"	"90"	"195336.698059082"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"62.7378"	"20525"	"20525"	"20499"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"23.4"	""	"21.2"	""	"37.0"	""	"33.6"	"33.1"	""	"937"	"47"	"36.000"	"29.000"	"0.000876414582761377"	"21"	"0"	"8.693E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAENAIEALK"	"[R].nAENAIEALk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"765.94800"	"1530.88872"	"1530.88918"	"-0.30"	"-0.00023"	"8/98"	"8"	"98"	"611691.749755859"	"HCD"	"MS2"	"22.77978"	"48.1"	"100.000"	"89.2331"	"31212"	"31212"	"31202"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.7"	""	"36.8"	""	"54.8"	""	"63.1"	""	"91.8"	"166.5"	""	"902"	"56"	"36.000"	"29.000"	"0.000123076898004643"	"25"	"0"	"6.028E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAANAEDIK"	"[K].lQAANAEDIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"765.94830"	"1530.88933"	"1530.88918"	"0.10"	"0.00008"	"8/90"	"8"	"90"	"321023.667480469"	"HCD"	"MS2"	"24.00105"	"30.8"	"100.000"	"62.9008"	"20558"	"20558"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.1"	""	"43.8"	""	"44.3"	""	"52.1"	""	"54.0"	"52.9"	""	"900"	"27"	"36.000"	"29.000"	"0.0824541490067044"	"25"	"0"	"0.0003856"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAENAIEALK"	"[R].nAENAIEALk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"765.94830"	"1530.88933"	"1530.88918"	"0.10"	"0.00008"	"8/98"	"8"	"98"	"549407.422180176"	"HCD"	"MS2"	"23.45662"	"43.9"	"100.000"	"89.1490"	"31218"	"31218"	"31201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.1"	""	"39.0"	""	"35.1"	""	"67.5"	""	"90.1"	"138.0"	""	"900"	"53"	"36.000"	"29.000"	"0.000211452348872347"	"29"	"0"	"6.025E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAENAIEALK"	"[R].nAENAIEALk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"765.94861"	"1530.88994"	"1530.88918"	"0.50"	"0.00038"	"8/98"	"8"	"98"	"319132.999572754"	"HCD"	"MS2"	"17.62387"	"27.9"	"100.000"	"88.8442"	"31096"	"31096"	"31068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"24.8"	""	"28.5"	""	"37.7"	""	"59.6"	"92.5"	""	"899"	"45"	"36.000"	"29.000"	"0.00152661560029389"	"27"	"0"	"0.0002373"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAENAIEALK"	"[R].nAENAIEALk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1;Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"Q64578; P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1; Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6857"	"0.0000"	"1"	"1"	"1"	"765.94922"	"1530.89116"	"1530.88918"	"1.30"	"0.00099"	"8/98"	"8"	"98"	"271979.193847656"	"HCD"	"MS2"	"9.942476"	"26.6"	"100.000"	"88.9514"	"31100"	"31100"	"31073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"24.2"	""	"27.7"	""	"43.6"	""	"45.5"	"92.2"	""	"886"	"35"	"36.000"	"29.000"	"0.0141711053359329"	"26"	"9.9E-05"	"0.0004239"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aANGVVLATEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"765.96655"	"1530.92583"	"1530.92556"	"0.17"	"0.00013"	"9/98"	"9"	"98"	"417742.2578125"	"HCD"	"MS2"	"37.11505"	"39.3"	"100.000"	"63.0228"	"20608"	"20608"	"20577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.7"	""	"51.1"	""	"57.4"	""	"64.4"	""	"67.0"	"71.9"	""	"729"	"50"	"35.000"	"28.000"	"0.000362825274624631"	"24"	"0"	"1.826E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFMIQGGDFTR"	"[K].dFmIQGGDFTR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.37415"	"1531.74101"	"1531.74124"	"-0.15"	"-0.00012"	"5/110"	"5"	"110"	"175489.508789063"	"HCD"	"MS2"	"44.46841"	"12.9"	"100.000"	"87.3467"	"30454"	"30454"	"30433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"11.9"	""	"17.1"	""	"29.1"	""	"23.3"	"27.4"	""	"504"	"21"	"34.000"	"27.000"	"0.222536134905478"	"14"	"0.003749"	"0.04032"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFMIQGGDFTR"	"[K].dFmIQGGDFTR.[G]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"P24368"	"Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus OX=10116 GN=Ppib PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"766.37433"	"1531.74138"	"1531.74124"	"0.09"	"0.00007"	"7/110"	"7"	"110"	"176525.929138184"	"HCD"	"MS2"	"16.39041"	"13.7"	"100.000"	"87.3252"	"30480"	"30480"	"30457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.4"	""	"11.0"	""	"12.0"	""	"32.2"	""	"29.3"	"28.3"	""	"505"	"20"	"34.000"	"27.000"	"0.229224683869992"	"19"	"0.004314"	"0.05086"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQVWDTAGQER"	"[K].lQVWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"766.40747"	"1531.80766"	"1531.80662"	"0.68"	"0.00052"	"4/108"	"4"	"108"	"115867.828308105"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"78.1374"	"26736"	"26736"	"26710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"13.0"	""	"12.8"	""	"15.9"	""	"19.0"	"17.1"	""	"905"	"15"	"36.000"	"29.000"	"1.59447819146725"	"22"	"0.004751"	"0.05608"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQVWDTAGQER"	"[K].lQVWDTAGQER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"P35286"	"Ras-related protein Rab-13 OS=Rattus norvegicus OX=10116 GN=Rab13 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"766.40808"	"1531.80889"	"1531.80662"	"1.48"	"0.00113"	"4/108"	"4"	"108"	"119935.466064453"	"HCD"	"MS2"	"27.62595"	"8.1"	"100.000"	"78.1787"	"26780"	"26780"	"26751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.6"	""	"10.6"	""	"10.5"	""	"11.9"	""	"15.6"	"18.5"	""	"916"	"21"	"36.000"	"29.000"	"0.369713643853968"	"21"	"0.0001991"	"0.00308"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGALFPSLVPGSR"	"[M].tTSGALFPSLVPGSR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"766.40900"	"1531.81072"	"1531.81148"	"-0.50"	"-0.00038"	"6/138"	"6"	"138"	"145350.162109375"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"113.7667"	"41044"	"41044"	"41023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.1"	""	"1.7"	""	"4.4"	""	"2.8"	""	"4.2"	"3.9"	"NoQuanLabels"	"892"	"33"	"36.000"	"29.000"	"0.023896530925095"	"17"	"0.0001686"	"0.001624"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTSGALFPSLVPGSR"	"[M].tTSGALFPSLVPGSR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"Q9JMB5"	"Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus OX=10116 GN=Adrm1 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"766.40924"	"1531.81120"	"1531.81148"	"-0.18"	"-0.00014"	"6/138"	"6"	"138"	"128299.993041992"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"113.7046"	"41005"	"41005"	"40985"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.0"	""	"3.5"	""	"1.9"	""	"2.7"	""	"5.8"	"3.2"	"NoQuanLabels"	"898"	"38"	"36.000"	"29.000"	"0.00671809809586401"	"21"	"0.0001991"	"0.004726"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGQQQAGGDGK"	"[R].qGQQQAGGDGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"766.41479"	"1531.82231"	"1531.82289"	"-0.38"	"-0.00029"	"8/100"	"8"	"100"	"213397.65234375"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"21.0193"	"3683"	"3683"	"3662"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"17.5"	""	"15.9"	""	"42.8"	""	"31.1"	"31.8"	""	"963"	"52"	"36.000"	"29.000"	"0.000289465154598198"	"20"	"0"	"5.231E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPGSSELQK"	"[K].lDPGSSELQk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"511.29538"	"1531.87159"	"1531.87319"	"-1.05"	"-0.00054"	"7/84"	"7"	"84"	"1278679.85534668"	"HCD"	"MS2"	"27.84591"	"44.8"	"100.000"	"66.8637"	"22197"	"22197"	"22175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.5"	""	"52.9"	""	"61.8"	""	"75.3"	""	"72.4"	"86.6"	""	"1044"	"22"	"37.000"	"30.000"	"0.361135766819684"	"24"	"0.0001686"	"0.001424"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPGSSELQK"	"[K].lDPGSSELQk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.6364"	"0.0000"	"1"	"1"	"1"	"511.29553"	"1531.87204"	"1531.87319"	"-0.75"	"-0.00038"	"8/84"	"8"	"84"	"1871472.13879395"	"HCD"	"MS2"	"23.43399"	"64.3"	"100.000"	"66.6723"	"22087"	"22087"	"22072"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.7"	""	"82.7"	""	"82.6"	""	"114.1"	""	"103.8"	"125.6"	""	"1042"	"33"	"37.000"	"30.000"	"0.0261118548719809"	"27"	"0"	"0.0002219"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8427"	"0.0000"	"1"	"1"	"1"	"511.29736"	"1531.87754"	"1531.87939"	"-1.21"	"-0.00062"	"11/106"	"11"	"106"	"9858668.04309082"	"HCD"	"MS2"	"0"	"68.5"	"100.000"	"71.8124"	"24176"	"24176"	"24161"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.2"	""	"72.1"	""	"75.6"	""	"114.5"	""	"170.3"	"153.5"	""	"1021"	"89"	"37.000"	"30.000"	"6.80762691119377E-08"	""	"0"	"3.136E-09"	"1.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"511.29758"	"1531.87818"	"1531.87939"	"-0.79"	"-0.00041"	"9/106"	"9"	"106"	"1309590.65460205"	"HCD"	"MS2"	"7.107419"	"19.9"	"100.000"	"72.4313"	"24423"	"24423"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"25.4"	""	"24.2"	""	"35.5"	""	"46.7"	"40.1"	""	"1016"	"84"	"37.000"	"30.000"	"2.03171932878637E-07"	"26"	"0"	"8.304E-08"	"1.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9103"	"0.0000"	"1"	"1"	"1"	"511.29761"	"1531.87827"	"1531.87939"	"-0.73"	"-0.00037"	"9/106"	"9"	"106"	"7100418.82739258"	"HCD"	"MS2"	"2.621624"	"49.6"	"100.000"	"72.2021"	"24360"	"24360"	"24342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.0"	""	"49.2"	""	"53.0"	""	"83.9"	""	"119.9"	"121.9"	""	"1016"	"78"	"37.000"	"30.000"	"8.4891403206984E-07"	"25"	"0"	"2.371E-08"	"1.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8488"	"0.0000"	"1"	"1"	"1"	"511.29767"	"1531.87845"	"1531.87939"	"-0.61"	"-0.00031"	"11/106"	"11"	"106"	"9988789.9331665"	"HCD"	"MS2"	"2.430023"	"70.1"	"100.000"	"71.8857"	"24236"	"24236"	"24218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.9"	"2.1"	"68.4"	""	"82.6"	""	"118.6"	""	"162.1"	"163.1"	""	"1013"	"86"	"37.000"	"30.000"	"1.16032446612687E-07"	"30"	"0"	"1.055E-08"	"1.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"511.29773"	"1531.87864"	"1531.87939"	"-0.49"	"-0.00025"	"10/106"	"10"	"106"	"6369049.78552246"	"HCD"	"MS2"	"2.845253"	"49.8"	"100.000"	"72.0993"	"24289"	"24289"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.0"	""	"53.5"	""	"59.9"	""	"88.9"	""	"106.8"	"104.5"	""	"996"	"91"	"36.000"	"29.000"	"4.03858606811213E-08"	""	"0"	"1.295E-09"	"1.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"511.29776"	"1531.87873"	"1531.87939"	"-0.43"	"-0.00022"	"10/106"	"10"	"106"	"2344024.94073486"	"HCD"	"MS2"	"33.61341"	"36.0"	"100.000"	"71.2322"	"23939"	"23939"	"23918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"47.4"	""	"46.1"	""	"58.2"	""	"81.0"	"72.5"	""	"991"	"87"	"36.000"	"29.000"	"9.39817783960123E-08"	"26"	"0"	"1.846E-09"	"1.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"511.29779"	"1531.87882"	"1531.87939"	"-0.37"	"-0.00019"	"9/106"	"9"	"106"	"1843011.95361328"	"HCD"	"MS2"	"1.166893"	"20.3"	"100.000"	"72.5069"	"24483"	"24483"	"24462"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"26.6"	""	"28.0"	""	"34.2"	""	"43.2"	"37.7"	""	"993"	"77"	"36.000"	"29.000"	"9.20278451025456E-07"	"28"	"0"	"3.536E-08"	"1.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"511.29779"	"1531.87882"	"1531.87939"	"-0.37"	"-0.00019"	"11/106"	"11"	"106"	"5822111.09460449"	"HCD"	"MS2"	"2.428946"	"49.7"	"100.000"	"71.5750"	"24109"	"24109"	"24094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"48.2"	""	"60.9"	""	"86.8"	"0.0"	"111.8"	"109.0"	""	"993"	"88"	"36.000"	"29.000"	"7.46309986163696E-08"	""	"0"	"1.197E-08"	"1.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8353"	"0.0000"	"1"	"1"	"1"	"511.29800"	"1531.87946"	"1531.87939"	"0.04"	"0.00002"	"11/106"	"11"	"106"	"6805445.07904053"	"HCD"	"MS2"	"0.9548547"	"51.6"	"100.000"	"71.5156"	"24054"	"24054"	"24037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"55.4"	""	"62.2"	""	"86.4"	""	"114.0"	"112.5"	""	"1070"	"85"	"37.000"	"30.000"	"1.67245246141132E-07"	""	"0"	"1.509E-09"	"1.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"511.29803"	"1531.87955"	"1531.87939"	"0.10"	"0.00005"	"13/106"	"13"	"106"	"420556.917175293"	"HCD"	"MS2"	"42.99514"	"18.5"	"100.000"	"72.8688"	"24631"	"24631"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.4"	""	"26.5"	""	"27.5"	""	"30.0"	""	"38.8"	"30.3"	""	"1065"	"30"	"37.000"	"30.000"	"0.0553757488303974"	"15"	"0"	"0.0001478"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDRPELTGAK"	"[K].sDRPELTGAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"511.29922"	"1531.88312"	"1531.88443"	"-0.85"	"-0.00044"	"7/98"	"7"	"98"	"15039989.8045654"	"HCD"	"MS2"	"25.89031"	"659.6"	"80.531"	"34.0870"	"8867"	"8867"	"8853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1181.6"	""	"876.6"	""	"939.2"	""	"911.1"	"2.7"	"1168.8"	"1160.5"	""	"1028"	"25"	"37.000"	"30.000"	"0.160310924622428"	"18"	"0.001615"	"0.01333"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDRPELTGAK"	"[K].sDRPELTGAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"511.29950"	"1531.88395"	"1531.88443"	"-0.31"	"-0.00016"	"7/98"	"7"	"98"	"16854330.8152466"	"HCD"	"MS2"	"39.8911"	"804.7"	"95.404"	"33.9440"	"8846"	"8846"	"8836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1402.0"	""	"1054.8"	""	"1126.5"	""	"1100.0"	""	"1462.7"	"1477.7"	""	"951"	"18"	"36.000"	"29.000"	"0.772948433359355"	"16"	"0.002834"	"0.02998"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"766.45752"	"1531.90776"	"1531.90958"	"-1.19"	"-0.00091"	"8/96"	"8"	"96"	"490350.325134277"	"HCD"	"MS2"	"36.33063"	"41.9"	"100.000"	"61.0149"	"19795"	"19795"	"19772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"73.3"	""	"66.0"	""	"64.2"	"0.7"	"68.6"	"66.6"	""	"834"	"53"	"36.000"	"29.000"	"0.000217338194530819"	""	"0"	"4.156E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIATDINEAK"	"[K].vIATDINEAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D4A1J4"	"3-hydroxybutyrate dehydrogenase type 2 OS=Rattus norvegicus OX=10116 GN=Bdh2 PE=3 SV=2"	"D4A1J4"	"3-hydroxybutyrate dehydrogenase type 2 OS=Rattus norvegicus OX=10116 GN=Bdh2 PE=3 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"766.45770"	"1531.90813"	"1531.90958"	"-0.95"	"-0.00073"	"8/86"	"8"	"86"	"214763.547119141"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"74.2585"	"25197"	"25197"	"25174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.1"	""	"21.7"	""	"20.8"	""	"34.3"	""	"47.7"	"30.7"	""	"833"	"40"	"36.000"	"29.000"	"0.00431136712421947"	"22"	"0.0001991"	"0.002387"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSLAGNELK"	"[K].eLSLAGNELk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"766.45776"	"1531.90825"	"1531.90958"	"-0.87"	"-0.00066"	"11/92"	"11"	"92"	"148192.981018066"	"HCD"	"MS2"	"35.0303"	"13.9"	"100.000"	"91.0688"	"31988"	"31988"	"31967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"17.1"	""	"16.8"	""	"17.6"	""	"31.7"	"34.7"	""	"833"	"25"	"36.000"	"29.000"	"0.143091885300298"	"21"	"0.001261"	"0.009625"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIATDINEAK"	"[K].vIATDINEAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D4A1J4"	"3-hydroxybutyrate dehydrogenase type 2 OS=Rattus norvegicus OX=10116 GN=Bdh2 PE=3 SV=2"	"D4A1J4"	"3-hydroxybutyrate dehydrogenase type 2 OS=Rattus norvegicus OX=10116 GN=Bdh2 PE=3 SV=2"	"0"	"2"	"2"	"0.5926"	"0.0000"	"1"	"1"	"1"	"766.45776"	"1531.90825"	"1531.90958"	"-0.87"	"-0.00066"	"6/86"	"6"	"86"	"251730.705810547"	"HCD"	"MS2"	"18.62305"	"26.4"	"100.000"	"74.1883"	"25139"	"25139"	"25110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"26.9"	""	"35.5"	""	"48.0"	""	"51.4"	"48.7"	""	"833"	"27"	"36.000"	"29.000"	"0.090493004099675"	"25"	"0.001615"	"0.01423"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aAnGVVLATEk.[K]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9365"	"0.0000"	"1"	"1"	"1"	"766.45776"	"1531.90825"	"1531.90958"	"-0.87"	"-0.00066"	"15/98"	"15"	"98"	"356096.31060791"	"HCD"	"MS2"	"17.09378"	"33.2"	"100.000"	"71.2298"	"23969"	"23969"	"23948"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.3"	""	"45.9"	""	"40.0"	""	"49.8"	""	"64.9"	"75.2"	""	"833"	"63"	"36.000"	"29.000"	"2.1858230719403E-05"	"20"	"0"	"7.835E-06"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aAnGVVLATEk.[K]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"766.45782"	"1531.90837"	"1531.90958"	"-0.79"	"-0.00060"	"16/98"	"16"	"98"	"422268.650939941"	"HCD"	"MS2"	"17.9157"	"34.0"	"100.000"	"70.2733"	"23583"	"23583"	"23563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.0"	""	"34.0"	""	"39.7"	""	"50.1"	""	"80.7"	"68.5"	""	"833"	"60"	"36.000"	"29.000"	"4.06083184109292E-05"	"24"	"0"	"3.306E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8657"	"0.0000"	"1"	"1"	"1"	"766.45801"	"1531.90874"	"1531.90958"	"-0.55"	"-0.00042"	"9/96"	"9"	"96"	"592122.850830078"	"HCD"	"MS2"	"15.75567"	"49.5"	"100.000"	"60.9711"	"19809"	"19809"	"19787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.5"	""	"76.6"	""	"81.9"	""	"72.9"	""	"76.3"	"88.3"	""	"802"	"67"	"36.000"	"29.000"	"7.58829791076634E-06"	"26"	"0"	"2.565E-06"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8136"	"0.0000"	"1"	"1"	"1"	"511.30783"	"1531.90894"	"1531.90958"	"-0.42"	"-0.00021"	"8/96"	"8"	"96"	"1173161.28033447"	"HCD"	"MS2"	"15.08885"	"38.4"	"100.000"	"61.3970"	"19982"	"19982"	"19958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"55.1"	""	"65.4"	""	"53.4"	""	"69.1"	"69.4"	""	"811"	"59"	"36.000"	"29.000"	"5.09320150278272E-05"	"27"	"0"	"2.568E-06"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLGPALAHELR"	"[K].ePLGPALAHELR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"511.30789"	"1531.90912"	"1531.87939"	"19.41"	"0.00991"	"15/106"	"15"	"106"	"1732663.01953125"	"HCD"	"MS2"	"45.83207"	"38.9"	"100.000"	"71.2735"	"23987"	"23987"	"23964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.4"	""	"53.0"	""	"52.4"	""	"60.5"	""	"75.3"	"80.1"	""	"811"	"49"	"36.000"	"29.000"	"0.000540742940742228"	"26"	"0"	"2.681E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aAnGVVLATEk.[K]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"766.45825"	"1531.90923"	"1531.90958"	"-0.23"	"-0.00018"	"18/98"	"18"	"98"	"479164.102600098"	"HCD"	"MS2"	"12.07081"	"37.5"	"100.000"	"70.1587"	"23503"	"23503"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.3"	""	"40.0"	""	"43.9"	""	"53.8"	"1.0"	"72.5"	"78.8"	""	"809"	"72"	"36.000"	"29.000"	"2.68484071977572E-06"	"24"	"0"	"1.779E-07"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"766.45837"	"1531.90947"	"1531.90958"	"-0.07"	"-0.00005"	"9/96"	"9"	"96"	"1475104.02374268"	"HCD"	"MS2"	"0"	"111.6"	"100.000"	"61.2727"	"19932"	"19932"	"19916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.6"	""	"177.0"	""	"187.4"	""	"162.6"	""	"167.9"	"214.3"	""	"810"	"68"	"36.000"	"29.000"	"6.28716739033023E-06"	"28"	"0"	"5.405E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aAnGVVLATEk.[K]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"766.45844"	"1531.90959"	"1531.90958"	"0.01"	"0.00001"	"9/98"	"9"	"98"	"353449.307861328"	"HCD"	"MS2"	"12.52158"	"30.6"	"100.000"	"69.8358"	"23372"	"23372"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.7"	""	"37.2"	""	"40.4"	""	"43.9"	""	"63.3"	"54.7"	""	"806"	"51"	"36.000"	"29.000"	"0.000316449960747859"	"17"	"0"	"1.318E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSLAGNELK"	"[K].eLSLAGNELk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"766.45850"	"1531.90972"	"1531.90958"	"0.09"	"0.00007"	"8/92"	"8"	"92"	"186984.909301758"	"HCD"	"MS2"	"49.5309"	"14.8"	"100.000"	"91.1389"	"31979"	"31979"	"31951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.5"	""	"17.1"	""	"18.3"	""	"22.2"	""	"34.0"	"34.6"	""	"806"	"13"	"36.000"	"29.000"	"1.88931793004542"	"20"	"0.003043"	"0.03271"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8033"	"0.0000"	"1"	"1"	"1"	"511.30811"	"1531.90976"	"1531.90958"	"0.12"	"0.00006"	"8/96"	"8"	"96"	"1257460.91625977"	"HCD"	"MS2"	"14.088"	"38.9"	"100.000"	"61.0102"	"19825"	"19825"	"19800"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"60.5"	""	"65.3"	""	"52.3"	"1.0"	"65.9"	"72.0"	""	"806"	"61"	"36.000"	"29.000"	"2.85959840489246E-05"	"28"	"0"	"1.228E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANGVVLATEK"	"[K].aAnGVVLATEk.[K]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"P17220"	"Proteasome subunit alpha type-2 OS=Rattus norvegicus OX=10116 GN=Psma2 PE=1 SV=3"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"766.45886"	"1531.91045"	"1531.90958"	"0.57"	"0.00043"	"17/98"	"17"	"98"	"353188.560913086"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"69.8974"	"23431"	"23431"	"23404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.1"	""	"33.3"	""	"28.0"	""	"40.6"	""	"53.1"	"51.4"	""	"792"	"70"	"35.000"	"28.000"	"3.7042064696243E-06"	"25"	"0"	"4.021E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"766.45892"	"1531.91057"	"1531.90958"	"0.65"	"0.00050"	"9/96"	"9"	"96"	"1567252.35229492"	"HCD"	"MS2"	"2.423671"	"116.4"	"100.000"	"61.3120"	"19916"	"19916"	"19896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.5"	""	"181.6"	""	"210.7"	""	"158.9"	""	"178.0"	"223.3"	""	"795"	"66"	"35.000"	"29.000"	"1.02644842577725E-05"	"27"	"0"	"7.355E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8246"	"0.0000"	"1"	"1"	"1"	"511.30838"	"1531.91059"	"1531.90958"	"0.66"	"0.00034"	"8/96"	"8"	"96"	"1246331.60699463"	"HCD"	"MS2"	"20.09979"	"39.9"	"100.000"	"61.0654"	"19816"	"19816"	"19786"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.5"	""	"62.9"	""	"61.0"	""	"57.8"	"0.5"	"71.0"	"74.4"	""	"795"	"57"	"35.000"	"29.000"	"7.3170687058391E-05"	"26"	"0"	"2.764E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQEAGTEVVK"	"[R].iQEAGTEVVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"3"	"3"	"0.8167"	"0.0000"	"1"	"1"	"1"	"511.30841"	"1531.91068"	"1531.90958"	"0.72"	"0.00037"	"8/96"	"8"	"96"	"1571095.0993042"	"HCD"	"MS2"	"15.73401"	"48.4"	"100.000"	"61.3876"	"19947"	"19947"	"19928"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"80.5"	""	"74.9"	""	"63.7"	"1.2"	"79.4"	"98.1"	""	"795"	"60"	"35.000"	"29.000"	"4.34847655593157E-05"	"27"	"0"	"6.647E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESAALIEAAK"	"[K].aESAALIEAAk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XIA4"	"CCR4-NOT transcription complex subunit 10 OS=Rattus norvegicus OX=10116 GN=Cnot10 PE=2 SV=1"	"Q5XIA4"	"CCR4-NOT transcription complex subunit 10 OS=Rattus norvegicus OX=10116 GN=Cnot10 PE=2 SV=1"	"0"	"3"	"3"	"0.5238"	"0.0000"	"1"	"1"	"1"	"511.30862"	"1531.91132"	"1531.90958"	"1.14"	"0.00058"	"8/92"	"8"	"92"	"338351.478271484"	"HCD"	"MS2"	"11.40257"	"16.6"	"100.000"	"81.5483"	"28150"	"28150"	"28125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"20.4"	""	"20.8"	""	"28.9"	""	"33.5"	"33.0"	""	"793"	"21"	"35.000"	"28.000"	"0.341384022741194"	"24"	"0"	"0.0002908"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].NSLESYAFNMk.[A]"	"K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.88434"	"1532.76140"	"1532.76165"	"-0.16"	"-0.00012"	"4/106"	"4"	"106"	"145246.070556641"	"HCD"	"MS2"	"29.77563"	"12.8"	"100.000"	"95.7914"	"33861"	"33861"	"33839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"21.1"	""	"19.4"	""	"19.4"	""	"19.5"	"24.6"	""	"665"	"13"	"35.000"	"28.000"	"1.76113095093976"	"13"	"0.005266"	"0.06708"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLESYAFNMK"	"[K].NSLESYAFNMk.[A]"	"K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.88470"	"1532.76213"	"1532.76165"	"0.32"	"0.00024"	"4/106"	"4"	"106"	"117640.06817627"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"95.8165"	"33904"	"33904"	"33878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"9.4"	""	"13.4"	""	"9.1"	""	"16.7"	"18.8"	""	"667"	"11"	"35.000"	"28.000"	"2.38833827306003"	"13"	"0.003529"	"0.03899"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDMGNSLIER"	"[R].gVIDMGNSLIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.91876"	"1532.83025"	"1532.83039"	"-0.10"	"-0.00007"	"9/112"	"9"	"112"	"279991.058837891"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"100.1923"	"35643"	"35643"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"29.9"	""	"23.5"	""	"15.6"	""	"33.7"	"37.8"	""	"1049"	"52"	"37.000"	"30.000"	"0.000349740150452545"	"16"	"0"	"6.573E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDMGNSLIER"	"[R].gVIDMGNSLIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"766.91895"	"1532.83061"	"1532.83039"	"0.14"	"0.00011"	"9/112"	"9"	"112"	"252717.754638672"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"100.3042"	"35716"	"35716"	"35691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.0"	""	"28.0"	""	"22.2"	""	"14.6"	""	"29.3"	"34.6"	""	"1047"	"60"	"37.000"	"30.000"	"5.51971540260823E-05"	"20"	"0"	"6.611E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGHGLPTNLPR"	"[K].lEGHGLPTNLPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.62921"	"1532.87308"	"1532.87464"	"-1.02"	"-0.00052"	"11/106"	"11"	"106"	"14654991.6419678"	"HCD"	"MS2"	"3.373267"	"90.3"	"82.941"	"63.5583"	"20858"	"20858"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.5"	""	"146.4"	""	"147.9"	""	"143.8"	"1.7"	"156.8"	"131.0"	""	"1029"	"34"	"37.000"	"30.000"	"0.0195157559768959"	"15"	"0"	"3.93E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGHGLPTNLPR"	"[K].lEGHGLPTNLPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.62946"	"1532.87381"	"1532.87464"	"-0.54"	"-0.00028"	"11/106"	"11"	"106"	"12819753.4122314"	"HCD"	"MS2"	"3.186127"	"107.5"	"100.000"	"63.5804"	"20835"	"20835"	"20821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.8"	""	"177.5"	""	"178.0"	""	"164.4"	""	"182.7"	"163.3"	""	"1016"	"34"	"37.000"	"30.000"	"0.019854717506254"	"15"	"0"	"0.0001569"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGHGLPTNLPR"	"[K].lEGHGLPTNLPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.62958"	"1532.87418"	"1532.87464"	"-0.30"	"-0.00015"	"9/106"	"9"	"106"	"5654727.46313477"	"HCD"	"MS2"	"10.10412"	"45.3"	"100.000"	"63.1827"	"20704"	"20704"	"20689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.3"	""	"59.1"	""	"59.1"	""	"75.7"	""	"87.4"	"75.7"	""	"1077"	"32"	"37.000"	"30.000"	"0.0359075445221535"	"14"	"0"	"4.771E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGPGVEPHGVLR"	"[K].vSGPGVEPHGVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.62973"	"1532.87464"	"1532.87464"	"0.00"	"0.00000"	"12/106"	"12"	"106"	"4828793.69696045"	"HCD"	"MS2"	"79.20686"	"130.6"	"100.000"	"44.0143"	"12891"	"12891"	"12865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.9"	""	"145.0"	""	"156.6"	""	"223.6"	""	"262.8"	"294.1"	""	"1075"	"44"	"37.000"	"30.000"	"0.00225620453895166"	"15"	"0"	"2.504E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGPGVEPHGVLR"	"[K].vSGPGVEPHGVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"511.62985"	"1532.87500"	"1532.87464"	"0.24"	"0.00012"	"10/106"	"10"	"106"	"5156363.19915771"	"HCD"	"MS2"	"72.40623"	"134.8"	"100.000"	"43.8587"	"12863"	"12863"	"12842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.1"	""	"146.6"	""	"163.1"	""	"235.4"	""	"286.6"	"298.3"	""	"1072"	"28"	"37.000"	"30.000"	"0.089776938155017"	"15"	"0"	"4.783E-06"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGHGLPTNLPR"	"[K].lEGHGLPTNLPR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.62994"	"1532.87528"	"1532.87464"	"0.42"	"0.00021"	"7/106"	"7"	"106"	"6655842.48162842"	"HCD"	"MS2"	"10.11158"	"51.8"	"100.000"	"63.2119"	"20685"	"20685"	"20668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.1"	"2.2"	"78.7"	""	"70.0"	""	"104.5"	""	"91.8"	"83.5"	""	"1070"	"49"	"37.000"	"30.000"	"0.000621375008404584"	"16"	"0"	"3.082E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPELYAELR"	"[K].vLTPELYAELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"766.94781"	"1532.88835"	"1532.88856"	"-0.14"	"-0.00010"	"9/92"	"9"	"92"	"2159484.387146"	"HCD"	"MS2"	"0"	"80.2"	"100.000"	"111.0928"	"39965"	"39965"	"39948"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.7"	""	"111.4"	""	"129.0"	""	"125.8"	"1.5"	"131.8"	"131.1"	""	"929"	"42"	"36.000"	"29.000"	"0.00272261177416766"	""	"0"	"0.0002426"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPELYAELR"	"[K].vLTPELYAELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"2"	"2"	"0.6596"	"0.0000"	"1"	"1"	"1"	"766.94818"	"1532.88909"	"1532.88856"	"0.34"	"0.00026"	"16/92"	"16"	"92"	"2745625.50366211"	"HCD"	"MS2"	"2.367137"	"107.2"	"100.000"	"111.0024"	"39914"	"39914"	"39895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.3"	""	"136.9"	""	"159.1"	""	"165.1"	"1.1"	"186.1"	"174.6"	""	"923"	"47"	"36.000"	"29.000"	"0.000851474615951327"	""	"0"	"0.0002326"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTPEHLPLLR"	"[R].dLTPEHLPLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"511.63809"	"1532.89972"	"1532.89979"	"-0.05"	"-0.00002"	"8/88"	"8"	"88"	"617830.935974121"	"HCD"	"MS2"	"67.5443"	"15.3"	"100.000"	"93.8055"	"33090"	"33090"	"33062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"18.5"	""	"17.7"	""	"24.4"	""	"27.9"	"28.9"	""	"848"	"24"	"36.000"	"29.000"	"0.169967488273977"	"25"	"9.9E-05"	"0.000687"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLTPEHLPLLR"	"[R].dLTPEHLPLLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"Q8K4F7"	"m7GpppX diphosphatase OS=Rattus norvegicus OX=10116 GN=Dcps PE=2 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"511.63818"	"1532.90000"	"1532.89979"	"0.13"	"0.00007"	"12/88"	"12"	"88"	"596530.061401367"	"HCD"	"MS2"	"41.87918"	"12.5"	"100.000"	"93.9120"	"33098"	"33098"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"16.8"	""	"14.8"	""	"20.1"	""	"24.2"	"23.5"	""	"845"	"23"	"36.000"	"29.000"	"0.20315462472001"	"15"	"0"	"0.0001618"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQVETISSGDGR"	"[M].gVQVETISSGDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.40735"	"1533.80742"	"1533.80702"	"0.26"	"0.00020"	"7/128"	"7"	"128"	"283270.952819824"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"46.6436"	"13992"	"13992"	"13961"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"20.1"	""	"22.6"	""	"40.9"	""	"39.7"	"45.2"	""	"909"	"31"	"36.000"	"29.000"	"0.0392223749960088"	"14"	"0"	"0.0003872"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVQVETISSGDGR"	"[M].gVQVETISSGDGR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"767.40759"	"1533.80791"	"1533.80702"	"0.58"	"0.00045"	"6/128"	"6"	"128"	"214680.863708496"	"HCD"	"MS2"	"100"	"16.7"	"100.000"	"47.0301"	"14111"	"14111"	"14086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"16.0"	""	"19.0"	""	"31.7"	""	"37.1"	"39.1"	""	"919"	"19"	"36.000"	"29.000"	"0.629920171552751"	"15"	"0"	"0.0003777"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"767.41058"	"1533.81389"	"1533.81441"	"-0.34"	"-0.00026"	"10/112"	"10"	"112"	"437032.262084961"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"57.7393"	"18460"	"18460"	"18439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"17.9"	""	"17.6"	""	"52.8"	""	"41.2"	"32.3"	""	"951"	"47"	"36.000"	"29.000"	"0.000957525880809565"	"20"	"0.0001991"	"0.002334"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"767.41095"	"1533.81462"	"1533.81441"	"0.14"	"0.00011"	"8/112"	"8"	"112"	"337299.913146973"	"HCD"	"MS2"	"12.88737"	"14.2"	"100.000"	"57.4928"	"18395"	"18395"	"18372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"14.5"	""	"15.6"	""	"35.1"	""	"32.9"	"26.6"	""	"952"	"26"	"36.000"	"29.000"	"0.132925086842897"	"24"	"0.001951"	"0.01725"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"767.41241"	"1533.81755"	"1533.81441"	"2.05"	"0.00157"	"15/112"	"15"	"112"	"545151.365539551"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"57.1871"	"18270"	"18270"	"18247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.8"	""	"24.4"	""	"26.9"	""	"64.8"	""	"46.1"	"48.0"	""	"953"	"42"	"36.000"	"29.000"	"0.00336560314606302"	"23"	"0.0001991"	"0.005962"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDQPMTEIVSR"	"[R].lDQPmTEIVSR.[V]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"767.41266"	"1533.81804"	"1533.81441"	"2.37"	"0.00182"	"10/112"	"10"	"112"	"472027.337219238"	"HCD"	"MS2"	"11.21189"	"23.3"	"100.000"	"57.4450"	"18340"	"18340"	"18314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"20.2"	""	"28.2"	""	"54.1"	""	"42.0"	"48.3"	""	"953"	"44"	"36.000"	"29.000"	"0.00176629363929397"	"19"	"9.9E-05"	"0.0007768"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVAQYGLDPATR"	"[R].nVAQYGLDPATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"767.41296"	"1533.81865"	"1533.82227"	"-2.36"	"-0.00181"	"5/116"	"5"	"116"	"233311.659729004"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"62.1758"	"20296"	"20296"	"20271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"17.9"	""	"17.2"	""	"21.4"	""	"20.6"	"29.1"	""	"952"	"27"	"36.000"	"29.000"	"0.0962957129050857"	"15"	"0.0009352"	"0.008329"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.41327"	"1533.81926"	"1533.82227"	"-1.96"	"-0.00151"	"7/130"	"7"	"130"	"206120.819335938"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"83.1666"	"28803"	"28803"	"28780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"18.9"	""	"20.6"	""	"26.1"	""	"21.8"	"29.3"	""	"962"	"16"	"36.000"	"29.000"	"1.3066072883116"	"13"	"0.002189"	"0.02107"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8718"	"0.0000"	"1"	"1"	"1"	"767.41412"	"1533.82097"	"1533.82227"	"-0.85"	"-0.00065"	"6/112"	"6"	"112"	"147414.030456543"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"99.5307"	"35373"	"35373"	"35351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"11.5"	""	"13.1"	""	"15.2"	""	"20.7"	"22.2"	""	"982"	"39"	"36.000"	"29.000"	"0.00638383262814346"	"20"	"0"	"0.0002967"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVAQYGLDPATR"	"[R].nVAQYGLDPATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"767.41418"	"1533.82109"	"1533.82227"	"-0.77"	"-0.00059"	"6/116"	"6"	"116"	"255250.163879395"	"HCD"	"MS2"	"37.22342"	"13.0"	"100.000"	"62.1958"	"20271"	"20271"	"20240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"18.4"	""	"19.3"	""	"17.4"	""	"28.4"	"25.6"	""	"984"	"41"	"36.000"	"29.000"	"0.00413014313367544"	"16"	"0"	"0.0002149"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8732"	"0.0000"	"1"	"1"	"1"	"511.94531"	"1533.82138"	"1533.82227"	"-0.58"	"-0.00030"	"14/112"	"14"	"112"	"827900.531555176"	"HCD"	"MS2"	"10.00012"	"13.1"	"100.000"	"99.3115"	"35284"	"35284"	"35270"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"17.1"	""	"33.7"	""	"15.4"	""	"27.9"	"18.1"	""	"978"	"71"	"36.000"	"29.000"	"3.72656635902426E-06"	"26"	"0"	"2.491E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVAQYGLDPATR"	"[R].nVAQYGLDPATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"767.41443"	"1533.82158"	"1533.82227"	"-0.45"	"-0.00035"	"7/116"	"7"	"116"	"307424.189453125"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"62.5141"	"20400"	"20400"	"20379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"13.6"	""	"21.1"	""	"30.7"	""	"32.4"	"28.5"	""	"982"	"56"	"36.000"	"29.000"	"0.000113784077313452"	"26"	"0"	"1.04E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"511.94540"	"1533.82166"	"1533.82227"	"-0.40"	"-0.00020"	"8/130"	"8"	"130"	"367511.883666992"	"HCD"	"MS2"	"9.675222"	"10.9"	"100.000"	"83.6977"	"28989"	"28989"	"28972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"15.5"	""	"13.8"	""	"15.3"	""	"22.3"	"20.5"	""	"984"	"40"	"36.000"	"29.000"	"0.00490868431400696"	"19"	"0"	"1.143E-06"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"767.41449"	"1533.82170"	"1533.82227"	"-0.37"	"-0.00028"	"11/130"	"11"	"130"	"245320.984558105"	"HCD"	"MS2"	"19.26022"	"14.8"	"100.000"	"83.7868"	"29054"	"29054"	"29034"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"18.0"	""	"17.1"	""	"23.3"	""	"31.8"	"31.2"	""	"984"	"16"	"36.000"	"29.000"	"1.15868424767684"	"20"	"9.9E-05"	"0.0008072"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.94543"	"1533.82175"	"1533.82227"	"-0.34"	"-0.00017"	"8/130"	"8"	"130"	"623607.70501709"	"HCD"	"MS2"	"43.68514"	"14.0"	"100.000"	"83.3026"	"28858"	"28858"	"28835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"18.2"	""	"16.2"	""	"24.4"	""	"28.0"	"29.8"	""	"984"	"45"	"36.000"	"29.000"	"0.00149267446262358"	"15"	"0"	"5.08E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8406"	"0.0000"	"1"	"1"	"1"	"511.94547"	"1533.82184"	"1533.82227"	"-0.28"	"-0.00014"	"14/112"	"14"	"112"	"1506584.85650635"	"HCD"	"MS2"	"4.594369"	"14.2"	"100.000"	"99.2875"	"35304"	"35304"	"35292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"14.3"	""	"40.0"	""	"19.0"	"1.8"	"21.7"	"25.3"	""	"1017"	"69"	"37.000"	"30.000"	"6.67253648651266E-06"	"27"	"0"	"4.454E-07"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"767.41461"	"1533.82195"	"1533.82227"	"-0.21"	"-0.00016"	"12/130"	"12"	"130"	"202804.145141602"	"HCD"	"MS2"	"24.99457"	"13.0"	"100.000"	"83.7669"	"29017"	"29017"	"28996"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"17.6"	""	"18.1"	""	"19.6"	""	"25.5"	"28.6"	""	"1017"	"18"	"37.000"	"30.000"	"0.796692919149994"	"14"	"0.0001991"	"0.002264"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"511.94550"	"1533.82193"	"1533.82227"	"-0.22"	"-0.00011"	"9/130"	"9"	"130"	"566252.513183594"	"HCD"	"MS2"	"22.16755"	"11.8"	"100.000"	"83.6507"	"28999"	"28999"	"28980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"16.3"	""	"18.6"	""	"14.3"	""	"27.4"	"20.1"	""	"1017"	"43"	"37.000"	"30.000"	"0.00230829312066628"	"15"	"0"	"6.796E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"511.94553"	"1533.82203"	"1533.82227"	"-0.16"	"-0.00008"	"10/130"	"10"	"130"	"762487.019348145"	"HCD"	"MS2"	"16.07548"	"13.3"	"100.000"	"83.4024"	"28870"	"28870"	"28848"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"20.7"	""	"18.9"	""	"22.7"	""	"22.0"	"29.1"	""	"1017"	"56"	"37.000"	"30.000"	"0.000127729425042262"	"22"	"0"	"1.48E-06"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"767.41473"	"1533.82219"	"1533.82227"	"-0.05"	"-0.00004"	"9/130"	"9"	"130"	"707512.331359863"	"HCD"	"MS2"	"16.33931"	"33.3"	"100.000"	"83.4737"	"28899"	"28899"	"28880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.9"	""	"40.5"	""	"44.2"	""	"45.3"	"0.4"	"71.0"	"72.8"	""	"1019"	"55"	"37.000"	"30.000"	"0.000174238525960735"	"19"	"0"	"1.393E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"767.41486"	"1533.82244"	"1533.82227"	"0.11"	"0.00008"	"8/112"	"8"	"112"	"442410.038085938"	"HCD"	"MS2"	"11.73519"	"25.1"	"100.000"	"98.9685"	"35175"	"35175"	"35162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.5"	""	"26.1"	""	"26.0"	""	"39.1"	"0.2"	"54.8"	"56.6"	""	"1016"	"54"	"37.000"	"30.000"	"0.00019854717506254"	"22"	"0"	"3.436E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"767.41486"	"1533.82244"	"1533.82227"	"0.11"	"0.00008"	"10/112"	"10"	"112"	"3130730.23657227"	"HCD"	"MS2"	"0"	"146.7"	"100.000"	"99.2056"	"35242"	"35242"	"35226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.2"	""	"158.2"	""	"171.5"	""	"247.8"	""	"311.7"	"318.6"	""	"1016"	"80"	"37.000"	"30.000"	"4.59053932650929E-07"	"24"	"0"	"2.256E-08"	"1.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"767.41492"	"1533.82256"	"1533.82227"	"0.19"	"0.00014"	"13/130"	"13"	"130"	"292379.963317871"	"HCD"	"MS2"	"11.75244"	"16.5"	"100.000"	"83.1791"	"28779"	"28779"	"28763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"25.7"	""	"19.9"	""	"24.1"	""	"31.2"	"30.1"	""	"1015"	"42"	"37.000"	"30.000"	"0.00332993722648725"	"16"	"0"	"1.868E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8732"	"0.0000"	"1"	"1"	"1"	"511.94571"	"1533.82257"	"1533.82227"	"0.20"	"0.00010"	"16/112"	"16"	"112"	"1170197.44073486"	"HCD"	"MS2"	"19.57946"	"12.8"	"100.000"	"99.0184"	"35166"	"35166"	"35145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"11.8"	""	"33.5"	""	"16.8"	""	"24.2"	"21.0"	""	"1015"	"71"	"37.000"	"30.000"	"4.39983151947294E-06"	"26"	"0"	"4.864E-08"	"1.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVAQYGLDPATR"	"[R].nVAQYGLDPATR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"D3ZBP4"	"[F-actin]-monooxygenase MICAL1 OS=Rattus norvegicus OX=10116 GN=Mical1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"767.41498"	"1533.82268"	"1533.82227"	"0.27"	"0.00020"	"7/116"	"7"	"116"	"211322.640319824"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"62.5078"	"20431"	"20431"	"20408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"16.7"	""	"13.5"	""	"20.3"	""	"26.9"	"22.2"	""	"1018"	"60"	"37.000"	"30.000"	"5.04333459950419E-05"	"24"	"0"	"7.688E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9344"	"0.0000"	"1"	"1"	"1"	"767.41498"	"1533.82268"	"1533.82227"	"0.27"	"0.00020"	"8/112"	"8"	"112"	"167068.938537598"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"99.5689"	"35417"	"35417"	"35401"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"11.2"	""	"13.1"	""	"20.1"	""	"18.6"	"23.2"	""	"1018"	"61"	"37.000"	"30.000"	"4.41283594760932E-05"	"21"	"0"	"1.087E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"767.41504"	"1533.82280"	"1533.82227"	"0.35"	"0.00026"	"9/112"	"9"	"112"	"385726.916748047"	"HCD"	"MS2"	"9.683563"	"21.7"	"100.000"	"98.9168"	"35125"	"35125"	"35103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"18.8"	""	"28.6"	""	"34.2"	""	"49.0"	"52.2"	""	"1014"	"66"	"37.000"	"30.000"	"1.3867812442375E-05"	"22"	"0"	"1.407E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPAVLSAASFDGR"	"[R].nPAVLSAASFDGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.9595"	"0.0000"	"1"	"1"	"1"	"767.41510"	"1533.82292"	"1533.82227"	"0.42"	"0.00033"	"12/130"	"12"	"130"	"763904.977722168"	"HCD"	"MS2"	"14.10887"	"35.0"	"100.000"	"83.4778"	"28929"	"28929"	"28909"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.8"	""	"45.3"	""	"48.7"	""	"51.3"	""	"70.4"	"73.6"	""	"1015"	"74"	"37.000"	"30.000"	"1.9608124085494E-06"	"20"	"0"	"2.548E-08"	"1.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"511.94586"	"1533.82303"	"1533.82227"	"0.50"	"0.00025"	"14/112"	"14"	"112"	"565072.546081543"	"HCD"	"MS2"	"31.01706"	"13.6"	"100.000"	"99.0170"	"35195"	"35195"	"35170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"10.7"	""	"55.2"	""	"13.7"	""	"19.1"	"18.5"	""	"1022"	"56"	"37.000"	"30.000"	"0.000123714584288219"	"21"	"0"	"1.704E-06"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNLAGAEELFAR"	"[R].nNLAGAEELFAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"767.41553"	"1533.82378"	"1533.82227"	"0.98"	"0.00075"	"10/112"	"10"	"112"	"3112655.56890869"	"HCD"	"MS2"	"0"	"143.6"	"100.000"	"99.2598"	"35293"	"35293"	"35282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.6"	""	"147.3"	""	"163.8"	""	"257.0"	""	"299.0"	"304.3"	""	"1022"	"75"	"37.000"	"30.000"	"1.44351366718193E-06"	"24"	"0"	"3.626E-07"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVEAAAELSAK"	"[K].sVEAAAELSAk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"0"	"2"	"2"	"0.8554"	"0.0000"	"1"	"1"	"1"	"767.44702"	"1533.88677"	"1533.88884"	"-1.35"	"-0.00104"	"10/96"	"10"	"96"	"463430.561279297"	"HCD"	"MS2"	"22.27812"	"37.5"	"100.000"	"69.3032"	"23189"	"23189"	"23167"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.4"	""	"46.1"	""	"53.4"	""	"60.6"	""	"77.8"	"71.5"	""	"846"	"83"	"36.000"	"29.000"	"2.19452416466951E-07"	""	"0"	"9.458E-08"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVEAAAELSAK"	"[K].sVEAAAELSAk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"0"	"2"	"2"	"0.8904"	"0.0000"	"1"	"1"	"1"	"767.44757"	"1533.88786"	"1533.88884"	"-0.64"	"-0.00049"	"17/96"	"17"	"96"	"447760.449584961"	"HCD"	"MS2"	"10.96421"	"35.6"	"100.000"	"69.6209"	"23318"	"23318"	"23299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.1"	""	"41.7"	""	"57.1"	""	"53.4"	"0.5"	"75.7"	"64.6"	""	"849"	"73"	"36.000"	"29.000"	"2.26400663134495E-06"	"25"	"0"	"4.356E-07"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"767.44763"	"1533.88799"	"1533.88884"	"-0.56"	"-0.00043"	"13/94"	"13"	"94"	"459572.582946777"	"HCD"	"MS2"	"34.78721"	"41.8"	"100.000"	"91.4570"	"32144"	"32144"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.9"	""	"70.5"	""	"61.0"	""	"63.5"	""	"72.2"	"65.8"	""	"835"	"40"	"36.000"	"29.000"	"0.00392334482160736"	"20"	"0"	"1.967E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVEAAAELSAK"	"[K].sVEAAAELSAk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"767.44775"	"1533.88823"	"1533.88884"	"-0.40"	"-0.00031"	"17/96"	"17"	"96"	"543161.045593262"	"HCD"	"MS2"	"17.76317"	"48.3"	"100.000"	"69.2375"	"23128"	"23128"	"23108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.2"	""	"53.8"	""	"81.7"	""	"69.0"	""	"95.2"	"89.8"	""	"869"	"72"	"36.000"	"29.000"	"2.52923848121444E-06"	"26"	"0"	"4.772E-07"	"1.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"767.44788"	"1533.88848"	"1533.88884"	"-0.24"	"-0.00018"	"8/94"	"8"	"94"	"435342.355102539"	"HCD"	"MS2"	"46.8547"	"37.5"	"100.000"	"91.4992"	"32125"	"32125"	"32105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.8"	""	"45.5"	""	"55.3"	""	"65.4"	"1.4"	"54.3"	"69.5"	""	"868"	"44"	"36.000"	"29.000"	"0.00159767974560859"	"19"	"0"	"7.361E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"511.96771"	"1533.88858"	"1533.88884"	"-0.17"	"-0.00009"	"11/94"	"11"	"94"	"1120040.0345459"	"HCD"	"MS2"	"30.43721"	"36.8"	"100.000"	"91.5701"	"32190"	"32190"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"54.7"	""	"57.9"	""	"50.7"	"0.9"	"62.1"	"63.5"	""	"866"	"39"	"36.000"	"29.000"	"0.00556529123755586"	"22"	"0"	"5.712E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"511.96780"	"1533.88886"	"1533.88884"	"0.01"	"0.00000"	"11/94"	"11"	"94"	"1178752.63110352"	"HCD"	"MS2"	"39.46877"	"40.7"	"100.000"	"91.6123"	"32171"	"32171"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.4"	""	"70.2"	""	"59.3"	""	"58.0"	""	"61.7"	"77.6"	""	"867"	"36"	"36.000"	"29.000"	"0.0101388594295883"	"21"	"0"	"9.734E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGDLGVDLTSK"	"[K].aGDLGVDLTSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"767.44824"	"1533.88921"	"1533.88884"	"0.24"	"0.00018"	"15/94"	"15"	"94"	"368418.588195801"	"HCD"	"MS2"	"7.64216"	"34.7"	"100.000"	"91.7946"	"32245"	"32245"	"32225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.6"	""	"41.1"	""	"46.5"	""	"60.6"	""	"57.3"	"68.3"	""	"867"	"58"	"36.000"	"29.000"	"7.63816616119441E-05"	"24"	"0"	"8.233E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVEAAAELSAK"	"[K].sVEAAAELSAk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"P04550"	"Parathymosin OS=Rattus norvegicus OX=10116 GN=Ptms PE=1 SV=2"	"0"	"2"	"2"	"0.8767"	"0.0000"	"1"	"1"	"1"	"767.44824"	"1533.88921"	"1533.88884"	"0.24"	"0.00018"	"17/96"	"17"	"96"	"431125.573669434"	"HCD"	"MS2"	"14.32459"	"37.3"	"100.000"	"69.5455"	"23253"	"23253"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.3"	""	"48.6"	""	"58.7"	""	"63.2"	""	"68.4"	"70.7"	""	"867"	"73"	"36.000"	"29.000"	"2.23351617426192E-06"	"26"	"0"	"5.874E-08"	"1.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"767.87396"	"1534.74065"	"1534.74091"	"-0.17"	"-0.00013"	"5/82"	"5"	"82"	"297913.470092773"	"HCD"	"MS2"	"15.54453"	"17.2"	"100.000"	"97.7468"	"34652"	"34652"	"34631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	""	"22.9"	""	"22.0"	""	"19.8"	"1.1"	"32.4"	"30.3"	""	"481"	"26"	"33.000"	"26.000"	"0.0584945064182253"	"19"	"0.002328"	"0.02191"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.87408"	"1534.74089"	"1534.74091"	"-0.01"	"-0.00001"	"5/82"	"5"	"82"	"295711.298034668"	"HCD"	"MS2"	"17.12579"	"19.5"	"100.000"	"97.7931"	"34702"	"34702"	"34679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"21.5"	""	"22.1"	""	"23.4"	"2.9"	"37.5"	"34.1"	""	"479"	"23"	"33.000"	"26.000"	"0.120866380766465"	"14"	"0.002166"	"0.01971"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WMPEITDEER"	"[K].wMPEITDEER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"767.87469"	"1534.74211"	"1534.74091"	"0.78"	"0.00060"	"6/82"	"6"	"82"	"90671.6036987305"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"98.0467"	"34774"	"34774"	"34750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"9.1"	""	"8.2"	""	"13.3"	""	"13.6"	"13.9"	""	"494"	"9"	"33.000"	"26.000"	"3.13110010866888"	"18"	"0.00452"	"0.0527"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDTGLNLSPDR"	"[R].aFDTGLNLSPDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P70531"	"Eukaryotic elongation factor 2 kinase OS=Rattus norvegicus OX=10116 GN=Eef2k PE=1 SV=1"	"P70531"	"Eukaryotic elongation factor 2 kinase OS=Rattus norvegicus OX=10116 GN=Eef2k PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.90479"	"1534.80229"	"1534.80629"	"-2.60"	"-0.00200"	"6/114"	"6"	"114"	"156179.303100586"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"94.3270"	"33302"	"33302"	"33278"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.9"	""	"13.5"	""	"19.7"	""	"22.9"	""	"20.7"	"22.9"	""	"930"	"20"	"36.000"	"29.000"	"0.437978662383121"	"14"	"0.003904"	"0.04241"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDTGLNLSPDR"	"[R].aFDTGLNLSPDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P70531"	"Eukaryotic elongation factor 2 kinase OS=Rattus norvegicus OX=10116 GN=Eef2k PE=1 SV=1"	"P70531"	"Eukaryotic elongation factor 2 kinase OS=Rattus norvegicus OX=10116 GN=Eef2k PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"767.90649"	"1534.80571"	"1534.80629"	"-0.38"	"-0.00029"	"11/114"	"11"	"114"	"252207.831176758"	"HCD"	"MS2"	"12.8468"	"17.0"	"100.000"	"94.1036"	"33176"	"33176"	"33147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"23.1"	""	"28.6"	""	"24.7"	""	"31.4"	"28.2"	""	"937"	"45"	"36.000"	"29.000"	"0.00155134930414594"	"18"	"0.0001686"	"0.001716"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFDTGLNLSPDR"	"[R].aFDTGLNLSPDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P70531"	"Eukaryotic elongation factor 2 kinase OS=Rattus norvegicus OX=10116 GN=Eef2k PE=1 SV=1"	"P70531"	"Eukaryotic elongation factor 2 kinase OS=Rattus norvegicus OX=10116 GN=Eef2k PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"767.90674"	"1534.80620"	"1534.80629"	"-0.06"	"-0.00004"	"5/114"	"5"	"114"	"173000.416442871"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"93.9993"	"33169"	"33169"	"33142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.1"	""	"17.4"	""	"18.5"	""	"14.9"	""	"25.8"	"24.0"	""	"978"	"16"	"36.000"	"29.000"	"1.12281668892694"	"21"	"0.006305"	"0.07819"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGTGATATVSPK"	"[K].sGTGATATVSPk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"G3V6U9"	"Actin-histidine N-methyltransferase OS=Rattus norvegicus OX=10116 GN=Setd3 PE=1 SV=1"	"G3V6U9"	"Actin-histidine N-methyltransferase OS=Rattus norvegicus OX=10116 GN=Setd3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"767.94470"	"1534.88213"	"1534.88409"	"-1.28"	"-0.00098"	"7/106"	"7"	"106"	"213250.111450195"	"HCD"	"MS2"	"100"	"17.0"	"100.000"	"35.7318"	"9569"	"9569"	"9539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"23.2"	""	"23.7"	""	"26.5"	""	"32.1"	"35.6"	""	"838"	"17"	"36.000"	"29.000"	"0.76597399056381"	"14"	"0.0001991"	"0.004779"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGELPADHPK"	"[R].lGELPADHPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"Q63433"	"Serine/threonine-protein kinase N1 OS=Rattus norvegicus OX=10116 GN=Pkn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"512.30432"	"1534.89841"	"1534.89935"	"-0.61"	"-0.00031"	"8/80"	"8"	"80"	"2049657.32836914"	"HCD"	"MS2"	"13.52794"	"68.7"	"100.000"	"52.5608"	"16392"	"16392"	"16372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.2"	""	"96.4"	""	"97.0"	""	"112.7"	""	"144.8"	"120.2"	""	"808"	"31"	"36.000"	"29.000"	"0.0305760489588474"	"17"	"0"	"3.266E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNQSGSLLFIGR"	"[R].dNQSGSLLFIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"768.42145"	"1535.83562"	"1535.83792"	"-1.50"	"-0.00115"	"7/118"	"7"	"118"	"166402.483947754"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"94.9307"	"33545"	"33545"	"33520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"16.8"	""	"20.7"	""	"18.1"	""	"16.4"	"21.8"	""	"1009"	"22"	"37.000"	"30.000"	"0.306804108145113"	"14"	"0.001827"	"0.01529"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNQSGSLLFIGR"	"[R].dNQSGSLLFIGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"768.42242"	"1535.83757"	"1535.83792"	"-0.23"	"-0.00017"	"7/118"	"7"	"118"	"158010.766174316"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"94.8898"	"33495"	"33495"	"33474"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"11.5"	""	"17.8"	""	"14.2"	""	"14.7"	"20.4"	""	"1023"	"26"	"37.000"	"30.000"	"0.116639496982821"	"17"	"0.002525"	"0.02381"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANLMEVSADKTK"	"[K].aNLMEVSADKTK.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"1"	"2"	"2"	"0.0862"	"0.0000"	"1"	"1"	"1"	"768.42627"	"1535.84526"	"1535.83006"	"9.90"	"0.00760"	"7/120"	"7"	"120"	"259920.250976563"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"77.3421"	"26414"	"26414"	"26395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"22.2"	""	"25.4"	""	"41.6"	"1.3"	"46.3"	"48.9"	""	"975"	"58"	"36.000"	"29.000"	"7.48125779114656E-05"	""	"0.0001991"	"0.004049"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANLMEVSADKTK"	"[K].aNLMEVSADKTK.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"P38656"	"Lupus La protein homolog OS=Rattus norvegicus OX=10116 GN=Ssb PE=1 SV=1"	"1"	"2"	"2"	"0.2333"	"0.0000"	"1"	"1"	"1"	"768.42853"	"1535.84978"	"1535.83006"	"12.84"	"0.00986"	"6/120"	"6"	"120"	"153552.696960449"	"HCD"	"MS2"	"31.82494"	"15.0"	"100.000"	"77.7116"	"26590"	"26590"	"26575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"18.7"	""	"16.0"	""	"24.2"	"1.0"	"34.2"	"26.7"	""	"958"	"30"	"36.000"	"29.000"	"0.0491287272674424"	""	"0.009411"	"0.1239"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDASFETK"	"[R].YALYDASFETk.[E]"	"K11(TMT6plex)"	"1"	"1"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"Q7M0E3"	"Destrin OS=Rattus norvegicus OX=10116 GN=Dstn PE=1 SV=3"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"768.89227"	"1536.77727"	"1536.77834"	"-0.70"	"-0.00054"	"5/90"	"5"	"90"	"89201.3817749023"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"91.0757"	"31991"	"31991"	"31967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.6"	""	"6.1"	""	"10.1"	""	"7.4"	""	"14.0"	"13.9"	""	"789"	"31"	"35.000"	"28.000"	"0.0321400840046221"	"23"	"0.002035"	"0.01829"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"512.94922"	"1536.83310"	"1536.83437"	"-0.82"	"-0.00042"	"7/82"	"7"	"82"	"1735946.22393799"	"HCD"	"MS2"	"13.12535"	"57.1"	"100.000"	"78.8127"	"27011"	"27011"	"26993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.8"	""	"80.3"	""	"73.7"	""	"72.6"	""	"114.7"	"115.5"	""	"989"	"36"	"36.000"	"29.000"	"0.0116725648630779"	"24"	"0.0001686"	"0.001125"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"768.92035"	"1536.83342"	"1536.83437"	"-0.61"	"-0.00047"	"8/82"	"8"	"82"	"1551254.13330078"	"HCD"	"MS2"	"0"	"131.6"	"100.000"	"78.9762"	"27104"	"27104"	"27086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.4"	""	"162.1"	""	"174.4"	""	"159.9"	""	"269.5"	"253.4"	""	"989"	"51"	"36.000"	"29.000"	"0.00036489364179884"	"24"	"0"	"0.0001794"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"512.94934"	"1536.83347"	"1536.83437"	"-0.58"	"-0.00030"	"7/82"	"7"	"82"	"3153339.36773682"	"HCD"	"MS2"	"14.8408"	"93.7"	"100.000"	"78.4645"	"26869"	"26869"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.7"	""	"138.7"	""	"136.8"	""	"106.5"	""	"186.2"	"167.5"	""	"990"	"30"	"36.000"	"29.000"	"0.0539020396200049"	"22"	"0.0001686"	"0.001854"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"768.92059"	"1536.83391"	"1536.83437"	"-0.30"	"-0.00023"	"7/82"	"7"	"82"	"3864755.70678711"	"HCD"	"MS2"	"0"	"325.4"	"100.000"	"78.6397"	"26968"	"26968"	"26951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"592.1"	""	"427.3"	""	"451.8"	""	"398.3"	"5.0"	"598.9"	"607.6"	""	"993"	"54"	"36.000"	"29.000"	"0.000193606196384904"	"23"	"0"	"0.0001423"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"512.94958"	"1536.83420"	"1536.83437"	"-0.11"	"-0.00005"	"7/82"	"7"	"82"	"1928914.01306152"	"HCD"	"MS2"	"4.715471"	"63.6"	"100.000"	"78.5315"	"26923"	"26923"	"26903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.6"	""	"85.8"	""	"88.9"	""	"85.1"	""	"118.8"	"122.2"	""	"996"	"25"	"36.000"	"29.000"	"0.148330118185574"	"23"	"0.0001991"	"0.004659"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"768.92078"	"1536.83428"	"1536.83437"	"-0.06"	"-0.00004"	"7/82"	"7"	"82"	"560611.081481934"	"HCD"	"MS2"	"0"	"56.3"	"100.000"	"78.2572"	"26785"	"26785"	"26758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.2"	""	"70.9"	""	"75.4"	""	"74.5"	""	"109.2"	"99.9"	""	"996"	"51"	"36.000"	"29.000"	"0.000415173229940578"	"22"	"0"	"4.277E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"512.94965"	"1536.83438"	"1536.83437"	"0.01"	"0.00001"	"7/82"	"7"	"82"	"2761715.85241699"	"HCD"	"MS2"	"8.118153"	"81.8"	"100.000"	"78.8379"	"27048"	"27048"	"27031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.5"	""	"108.5"	""	"115.8"	""	"93.5"	""	"161.5"	"158.8"	""	"995"	"34"	"36.000"	"29.000"	"0.0206439636210596"	"21"	"0.0001686"	"0.001212"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"768.92084"	"1536.83440"	"1536.83437"	"0.02"	"0.00002"	"7/82"	"7"	"82"	"4584585.06524658"	"HCD"	"MS2"	"0"	"383.8"	"100.000"	"78.5730"	"26914"	"26914"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"659.1"	""	"513.4"	""	"550.4"	""	"464.7"	"1.9"	"712.1"	"733.0"	""	"995"	"54"	"36.000"	"29.000"	"0.000190017274742923"	"24"	"0"	"0.0001502"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDMNEIk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"768.92230"	"1536.83733"	"1536.83437"	"1.93"	"0.00148"	"7/82"	"7"	"82"	"399262.718200684"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"78.3492"	"26849"	"26849"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.8"	""	"46.6"	""	"47.7"	""	"46.1"	"0.0"	"71.1"	"63.0"	""	"1002"	"51"	"36.000"	"30.000"	"0.000417674273494437"	"21"	"0"	"3.703E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTPEYTVELR"	"[K].lSTPEYTVELR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"768.92664"	"1536.84599"	"1536.84709"	"-0.71"	"-0.00055"	"5/94"	"5"	"94"	"190443.316772461"	"HCD"	"MS2"	"40.83523"	"12.9"	"100.000"	"93.1605"	"32794"	"32794"	"32769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"14.8"	""	"16.4"	""	"21.3"	""	"28.4"	"23.6"	""	"938"	"25"	"36.000"	"29.000"	"0.152817412769942"	"20"	"0.001103"	"0.009187"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDMAALTAAGK"	"[K].nDmAALTAAGk.[E]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"768.92670"	"1536.84612"	"1536.84560"	"0.34"	"0.00026"	"16/110"	"16"	"110"	"247584.303283691"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"48.4587"	"14729"	"14729"	"14702"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"21.0"	""	"25.2"	""	"56.3"	""	"42.9"	"42.5"	""	"931"	"57"	"36.000"	"29.000"	"0.000100443002246057"	"22"	"9.9E-05"	"0.000407"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSTPEYTVELR"	"[K].lSTPEYTVELR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"768.92676"	"1536.84624"	"1536.84709"	"-0.55"	"-0.00043"	"9/94"	"9"	"94"	"209058.575744629"	"HCD"	"MS2"	"42.99525"	"13.6"	"100.000"	"93.0825"	"32799"	"32799"	"32768"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"11.7"	""	"15.4"	""	"23.1"	""	"28.6"	"31.7"	""	"944"	"22"	"36.000"	"29.000"	"0.278574909841111"	"22"	"0.001348"	"0.01113"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDMAALTAAGK"	"[K].nDmAALTAAGk.[E]"	"N-Term(TMT6plex); M3(Oxidation); K11(TMT6plex)"	"1"	"1"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"P35435"	"ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1c PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"768.92725"	"1536.84722"	"1536.84560"	"1.05"	"0.00081"	"10/110"	"10"	"110"	"272264.932067871"	"HCD"	"MS2"	"0"	"21.6"	"100.000"	"48.5268"	"14720"	"14720"	"14704"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"21.2"	""	"20.9"	""	"55.1"	""	"42.6"	"48.7"	""	"931"	"53"	"36.000"	"29.000"	"0.000223830716703349"	"20"	"9.9E-05"	"0.000957"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNVDLVEFK"	"[K].dNVDLVEFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"768.93713"	"1536.86699"	"1536.86738"	"-0.25"	"-0.00019"	"12/90"	"12"	"90"	"195424.536743164"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"101.1632"	"36063"	"36063"	"36047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.1"	""	"21.1"	""	"18.7"	""	"31.3"	""	"28.0"	"38.4"	""	"936"	"36"	"36.000"	"29.000"	"0.010672000896962"	""	"0.0001991"	"0.005263"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNVDLVEFK"	"[K].dNVDLVEFk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"P50297"	"Arylamine N-acetyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nat1 PE=2 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"768.93719"	"1536.86711"	"1536.86738"	"-0.17"	"-0.00013"	"7/90"	"7"	"90"	"174672.880859375"	"HCD"	"MS2"	"7.421509"	"17.6"	"100.000"	"101.0855"	"36005"	"36005"	"35986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"18.0"	""	"18.8"	""	"26.5"	"0.8"	"34.8"	"37.8"	""	"935"	"51"	"36.000"	"29.000"	"0.000353819378422305"	""	"0"	"6.09E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEQLAQK"	"[R].aQYEQLAQk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6600"	"0.0000"	"1"	"1"	"1"	"768.94275"	"1536.87822"	"1536.87861"	"-0.26"	"-0.00020"	"14/78"	"14"	"78"	"228934.166137695"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"58.7955"	"18927"	"18927"	"18903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"23.3"	""	"29.2"	""	"28.4"	""	"36.1"	"43.3"	""	"827"	"50"	"36.000"	"29.000"	"0.000378857172665447"	""	"0"	"8.98E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEQLAQK"	"[R].aQYEQLAQk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"768.94318"	"1536.87908"	"1536.87861"	"0.30"	"0.00023"	"10/78"	"10"	"78"	"217498.60345459"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"59.0649"	"19001"	"19001"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"21.6"	""	"24.7"	""	"24.4"	""	"34.9"	"42.6"	""	"822"	"27"	"36.000"	"29.000"	"0.0864652938744021"	"22"	"0.005266"	"0.06708"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQYEQLAQK"	"[R].aQYEQLAQk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"Q5BJY9"	"Keratin, type I cytoskeletal 18 OS=Rattus norvegicus OX=10116 GN=Krt18 PE=1 SV=3"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"768.94336"	"1536.87944"	"1536.87861"	"0.54"	"0.00041"	"8/78"	"8"	"78"	"335032.231140137"	"HCD"	"MS2"	"7.646056"	"30.0"	"100.000"	"58.5976"	"18846"	"18846"	"18827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"38.8"	""	"36.5"	""	"49.6"	""	"52.2"	"64.0"	""	"822"	"41"	"36.000"	"29.000"	"0.00304678509174677"	""	"0"	"0.000118"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YENDLALLK"	"[K].yENDLALLk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"Q03238"	"Granzyme M (Fragment) OS=Rattus norvegicus OX=10116 GN=Gzmm PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"768.95612"	"1536.90495"	"1536.90377"	"0.77"	"0.00059"	"5/80"	"5"	"80"	"134264.659790039"	"HCD"	"MS2"	"30.58481"	"14.2"	"100.000"	"105.8761"	"37928"	"37928"	"37910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"24.5"	""	"21.8"	""	"22.5"	""	"27.3"	"18.4"	""	"703"	"20"	"35.000"	"28.000"	"0.329553045434447"	"18"	"0.001615"	"0.01313"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGmSGk.[L]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"769.39337"	"1537.77947"	"1537.78033"	"-0.56"	"-0.00043"	"9/104"	"9"	"104"	"109786.819152832"	"HCD"	"MS2"	"37.45588"	"4.7"	"100.000"	"108.4726"	"38929"	"38929"	"38917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"5.1"	""	"7.6"	""	"7.2"	""	"7.3"	"10.0"	""	"816"	"37"	"36.000"	"29.000"	"0.00823493476382077"	"16"	"9.9E-05"	"0.000574"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEEVVIAGMSGK"	"[-].mEEVVIAGmSGk.[L]"	"N-Term(Prot)(Acetyl); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.39386"	"1537.78044"	"1537.78033"	"0.07"	"0.00006"	"8/104"	"8"	"104"	"98005.9096069336"	"HCD"	"MS2"	"35.80785"	"6.2"	"100.000"	"108.7239"	"39038"	"39038"	"39029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"9.7"	""	"10.7"	""	"9.1"	""	"9.3"	"11.0"	""	"819"	"22"	"36.000"	"29.000"	"0.255419415130051"	"14"	"0.001488"	"0.01225"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"769.44672"	"1537.88616"	"1537.88778"	"-1.06"	"-0.00081"	"6/74"	"6"	"74"	"249651.907470703"	"HCD"	"MS2"	"5.476128"	"22.4"	"100.000"	"111.3721"	"40078"	"40078"	"40060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.4"	""	"19.5"	""	"27.6"	""	"35.9"	""	"45.8"	"54.4"	""	"805"	"36"	"36.000"	"29.000"	"0.0106112338279472"	"24"	"0"	"0.0002782"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"769.44720"	"1537.88713"	"1537.88778"	"-0.42"	"-0.00032"	"16/74"	"16"	"74"	"7419083.70050049"	"HCD"	"MS2"	"3.119433"	"517.3"	"100.000"	"111.0603"	"39951"	"39951"	"39932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"674.3"	""	"548.0"	""	"573.7"	""	"879.5"	""	"1080.4"	"1160.6"	""	"807"	"54"	"36.000"	"29.000"	"0.000144159590194304"	""	"0"	"6.902E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"513.30060"	"1537.88724"	"1537.88778"	"-0.35"	"-0.00018"	"6/74"	"6"	"74"	"7250756.95495605"	"HCD"	"MS2"	"4.768692"	"171.9"	"100.000"	"111.0651"	"39953"	"39953"	"39932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.0"	""	"183.8"	"2.4"	"181.0"	""	"287.7"	""	"375.0"	"387.3"	""	"807"	"33"	"36.000"	"29.000"	"0.0216692329835397"	"27"	"9.9E-05"	"0.0005491"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"769.44745"	"1537.88762"	"1537.88778"	"-0.10"	"-0.00008"	"11/74"	"11"	"74"	"274071.771789551"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"111.2844"	"40029"	"40029"	"40007"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"24.1"	""	"22.0"	""	"39.3"	""	"47.5"	"54.4"	""	"807"	"30"	"36.000"	"29.000"	"0.0434353713699639"	"25"	"9.9E-05"	"0.000757"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.6607"	"0.0000"	"1"	"1"	"1"	"769.44751"	"1537.88774"	"1537.88778"	"-0.02"	"-0.00002"	"16/74"	"16"	"74"	"7784201.64593506"	"HCD"	"MS2"	"1.27027"	"586.2"	"100.000"	"110.9563"	"39896"	"39896"	"39879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"743.4"	""	"636.0"	""	"625.9"	""	"1032.3"	""	"1229.4"	"1305.0"	""	"803"	"56"	"36.000"	"29.000"	"9.28294013255502E-05"	""	"0"	"0.0001905"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAVLEYLK"	"[R].eDAVLEYLk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"513.30078"	"1537.88779"	"1537.88778"	"0.01"	"0.00000"	"7/74"	"7"	"74"	"7710406.30438232"	"HCD"	"MS2"	"7.505561"	"186.4"	"100.000"	"110.9608"	"39897"	"39897"	"39879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"242.0"	""	"206.2"	""	"204.2"	""	"322.2"	""	"409.9"	"389.3"	""	"803"	"29"	"36.000"	"29.000"	"0.0487175623461689"	"25"	"9.9E-05"	"0.0005968"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIEPLPVTPTR"	"[R].sVIEPLPVTPTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P35465"	"Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus OX=10116 GN=Pak1 PE=1 SV=3"	"P35465"	"Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus OX=10116 GN=Pak1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.46082"	"1537.91435"	"1537.91511"	"-0.49"	"-0.00038"	"5/108"	"5"	"108"	"119002.92590332"	"HCD"	"MS2"	"24.6427"	"6.9"	"100.000"	"89.4339"	"31293"	"31293"	"31272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"7.8"	""	"8.9"	""	"11.8"	""	"13.2"	"14.3"	""	"591"	"17"	"34.000"	"27.000"	"0.589600014073304"	"14"	"0.0005778"	"0.00712"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIEPLPVTPTR"	"[R].sVIEPLPVTPTR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P35465"	"Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus OX=10116 GN=Pak1 PE=1 SV=3"	"P35465"	"Serine/threonine-protein kinase PAK 1 OS=Rattus norvegicus OX=10116 GN=Pak1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.46191"	"1537.91655"	"1537.91511"	"0.94"	"0.00072"	"4/108"	"4"	"108"	"133630.253845215"	"HCD"	"MS2"	"23.51156"	"7.2"	"100.000"	"89.3545"	"31301"	"31301"	"31280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.7"	""	"9.0"	""	"10.7"	""	"10.8"	""	"17.9"	"13.5"	""	"585"	"21"	"34.000"	"27.000"	"0.233951519589556"	"14"	"0.0001991"	"0.003158"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLSVAFSSDNR"	"[K].dVLSVAFSSDNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.90479"	"1538.80229"	"1538.80120"	"0.71"	"0.00055"	"7/108"	"7"	"108"	"108601.577270508"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"98.4227"	"34926"	"34926"	"34895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"7.2"	""	"9.4"	""	"11.9"	""	"10.0"	"14.3"	""	"856"	"8"	"36.000"	"29.000"	"6.30149751041204"	"13"	"0.008135"	"0.1035"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVLSVAFSSDNR"	"[K].dVLSVAFSSDNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.90527"	"1538.80327"	"1538.80120"	"1.34"	"0.00103"	"6/108"	"6"	"108"	"90642.2753295898"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"98.4462"	"34965"	"34965"	"34935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"7.3"	""	"10.8"	""	"11.4"	""	"10.0"	"11.3"	""	"847"	"14"	"36.000"	"29.000"	"1.76138143544218"	"13"	"0.00307"	"0.0335"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAYVNAIEK"	"[R].tAAYVnAIEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"769.94421"	"1538.88115"	"1538.88303"	"-1.22"	"-0.00094"	"8/96"	"8"	"96"	"146329.359130859"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"82.0977"	"28345"	"28345"	"28327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"18.4"	""	"20.2"	""	"26.0"	""	"25.8"	"30.2"	""	"771"	"45"	"35.000"	"28.000"	"0.00126189837875792"	"24"	"0"	"5.26E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"513.63208"	"1538.88169"	"1538.88303"	"-0.87"	"-0.00045"	"11/82"	"11"	"82"	"1367366.32550049"	"HCD"	"MS2"	"26.20596"	"43.0"	"100.000"	"82.5144"	"28510"	"28510"	"28492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.7"	""	"57.1"	""	"55.8"	""	"79.5"	""	"80.7"	"82.6"	""	"770"	"42"	"35.000"	"28.000"	"0.00218002126279727"	"21"	"0"	"0.0001853"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"769.94464"	"1538.88201"	"1538.88303"	"-0.67"	"-0.00051"	"18/82"	"18"	"82"	"1345615.57666016"	"HCD"	"MS2"	"8.551691"	"105.3"	"100.000"	"82.7850"	"28648"	"28648"	"28630"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.3"	""	"142.3"	""	"157.1"	""	"167.4"	""	"181.1"	"201.8"	""	"768"	"72"	"35.000"	"28.000"	"2.32986750561986E-06"	"26"	"0"	"1.578E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.63232"	"1538.88242"	"1538.88303"	"-0.40"	"-0.00020"	"9/82"	"9"	"82"	"528489.137084961"	"HCD"	"MS2"	"64.08624"	"19.6"	"100.000"	"83.1989"	"28816"	"28816"	"28796"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"26.1"	""	"26.7"	""	"37.8"	"0.6"	"35.4"	"38.9"	""	"783"	"40"	"35.000"	"28.000"	"0.00368749777038692"	"15"	"0.0001991"	"0.002117"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAYVNAIEK"	"[R].tAAYVnAIEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"769.94495"	"1538.88262"	"1538.88303"	"-0.27"	"-0.00021"	"13/96"	"13"	"96"	"228479.902526855"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"82.0952"	"28372"	"28372"	"28350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"27.6"	""	"21.6"	""	"30.4"	""	"45.3"	"44.9"	""	"783"	"51"	"35.000"	"28.000"	"0.000344930633782637"	"21"	"0"	"9.169E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8060"	"0.0000"	"1"	"1"	"1"	"769.94495"	"1538.88262"	"1538.88303"	"-0.27"	"-0.00021"	"9/82"	"9"	"82"	"1379728.69714355"	"HCD"	"MS2"	"10.15507"	"100.9"	"100.000"	"82.7484"	"28605"	"28605"	"28586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.5"	""	"146.2"	""	"148.8"	""	"165.5"	"2.7"	"172.4"	"188.2"	""	"783"	"67"	"35.000"	"28.000"	"8.42814049144591E-06"	""	"0"	"7.74E-07"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"513.63245"	"1538.88279"	"1538.88303"	"-0.16"	"-0.00008"	"10/82"	"10"	"82"	"1679521.56262207"	"HCD"	"MS2"	"26.84694"	"51.9"	"100.000"	"82.6088"	"28577"	"28577"	"28553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.5"	""	"60.3"	"2.3"	"82.0"	""	"92.3"	"0.5"	"84.5"	"104.2"	""	"783"	"41"	"35.000"	"28.000"	"0.00308838736047664"	"20"	"0"	"0.0001759"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"513.63245"	"1538.88279"	"1538.88303"	"-0.16"	"-0.00008"	"10/82"	"10"	"82"	"2703461.27124023"	"HCD"	"MS2"	"11.03746"	"75.5"	"100.000"	"82.8897"	"28690"	"28690"	"28675"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.3"	""	"104.4"	""	"110.9"	""	"124.1"	"1.5"	"134.9"	"148.8"	""	"783"	"48"	"35.000"	"28.000"	"0.000688227094864828"	"21"	"0"	"6.406E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAYVNAIEK"	"[R].tAAYVnAIEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"769.94519"	"1538.88310"	"1538.88303"	"0.05"	"0.00004"	"10/96"	"10"	"96"	"157049.759460449"	"HCD"	"MS2"	"45.60646"	"13.2"	"100.000"	"81.7697"	"28240"	"28240"	"28216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"15.7"	""	"14.9"	""	"26.1"	""	"27.5"	"23.9"	""	"783"	"26"	"35.000"	"28.000"	"0.105616498780219"	"14"	"0.0001991"	"0.003314"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"769.94537"	"1538.88347"	"1538.88303"	"0.29"	"0.00022"	"16/82"	"16"	"82"	"414331"	"HCD"	"MS2"	"4.444181"	"35.2"	"100.000"	"83.0452"	"28725"	"28725"	"28706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.5"	""	"40.5"	""	"57.6"	""	"52.6"	""	"61.1"	"77.3"	""	"783"	"60"	"35.000"	"28.000"	"3.83470329287505E-05"	"27"	"0"	"4.392E-06"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAYVNAIEK"	"[R].tAAYVnAIEk.[V]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"769.94550"	"1538.88371"	"1538.88303"	"0.44"	"0.00034"	"8/96"	"8"	"96"	"243933.979187012"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"81.8001"	"28224"	"28224"	"28199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.8"	""	"25.0"	""	"29.0"	""	"34.0"	""	"37.0"	"42.3"	""	"770"	"39"	"35.000"	"28.000"	"0.00440008158894062"	"22"	"0"	"9.095E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"3"	"3"	"0.8810"	"0.0000"	"1"	"1"	"1"	"513.63281"	"1538.88388"	"1538.88303"	"0.56"	"0.00028"	"10/82"	"10"	"82"	"2663505.73217773"	"HCD"	"MS2"	"8.819805"	"75.9"	"100.000"	"82.8089"	"28630"	"28630"	"28615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.0"	""	"100.9"	""	"112.5"	""	"116.7"	""	"138.0"	"149.2"	""	"781"	"42"	"35.000"	"28.000"	"0.00229414592162878"	"20"	"0"	"0.0002158"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"769.94574"	"1538.88420"	"1538.88303"	"0.76"	"0.00059"	"9/82"	"9"	"82"	"455583.637939453"	"HCD"	"MS2"	"3.348678"	"36.6"	"100.000"	"83.0790"	"28767"	"28767"	"28748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.4"	""	"57.2"	""	"48.6"	""	"58.9"	""	"66.6"	"70.0"	""	"781"	"69"	"35.000"	"28.000"	"5.15965945149857E-06"	"26"	"0"	"5.102E-07"	"1.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"769.94580"	"1538.88432"	"1538.88303"	"0.84"	"0.00065"	"9/82"	"9"	"82"	"432280.719482422"	"HCD"	"MS2"	"45.94081"	"36.8"	"100.000"	"82.4519"	"28485"	"28485"	"28463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"50.0"	""	"55.2"	""	"59.4"	"1.1"	"67.9"	"60.4"	""	"783"	"39"	"35.000"	"28.000"	"0.00509016389800033"	"24"	"0"	"2.055E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVATGEK"	"[R].yLAEVATGEk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"769.94580"	"1538.88432"	"1538.88303"	"0.84"	"0.00065"	"13/82"	"13"	"82"	"398723.071533203"	"HCD"	"MS2"	"45.90631"	"34.2"	"100.000"	"82.4926"	"28530"	"28530"	"28505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"46.4"	""	"48.1"	""	"50.9"	""	"65.5"	"63.7"	""	"783"	"42"	"35.000"	"28.000"	"0.0025452577376932"	"26"	"0"	"7.122E-06"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGDNLIVPGGVK"	"[K].QIGDNLIVPGGVk.[T]"	"K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"769.95880"	"1538.91033"	"1538.91036"	"-0.02"	"-0.00002"	"5/120"	"5"	"120"	"349859.455505371"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"112.6015"	"40565"	"40565"	"40537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"14.9"	""	"14.3"	""	"22.0"	""	"23.4"	"24.4"	""	"633"	"30"	"35.000"	"28.000"	"0.0346237189925118"	"17"	"0.001488"	"0.01279"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGDNLIVPGGVK"	"[K].QIGDNLIVPGGVk.[T]"	"K13(TMT6plex)"	"1"	"1"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"Q62952"	"Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"769.95886"	"1538.91045"	"1538.91036"	"0.06"	"0.00004"	"5/120"	"5"	"120"	"366982.456359863"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"112.6639"	"40604"	"40604"	"40575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"20.3"	""	"22.3"	""	"19.5"	""	"20.9"	"25.5"	""	"633"	"29"	"35.000"	"28.000"	"0.0412452285380153"	"16"	"0.002462"	"0.02312"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEPSEVFINR"	"[R].yGEPSEVFINR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"770.40375"	"1539.80022"	"1539.80047"	"-0.17"	"-0.00013"	"5/88"	"5"	"88"	"158215.090515137"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"79.9562"	"27477"	"27477"	"27446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.5"	""	"15.0"	""	"10.8"	""	"17.5"	""	"21.1"	"27.2"	""	"820"	"18"	"36.000"	"29.000"	"0.6804306320494"	"20"	"0.002286"	"0.02186"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEPSEVFINR"	"[R].yGEPSEVFINR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"Q4KLH4"	"Paraspeckle component 1 OS=Rattus norvegicus OX=10116 GN=Pspc1 PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"770.40399"	"1539.80071"	"1539.80047"	"0.15"	"0.00012"	"4/88"	"4"	"88"	"175269.380126953"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"79.6128"	"27337"	"27337"	"27307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"13.5"	""	"13.5"	""	"25.8"	""	"30.6"	"25.6"	""	"823"	"9"	"36.000"	"29.000"	"4.63841753216223"	"19"	"0.005266"	"0.06757"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"513.95459"	"1539.84922"	"1539.85146"	"-1.46"	"-0.00075"	"10/94"	"10"	"94"	"8589376.3883667"	"HCD"	"MS2"	"0.8500798"	"33.5"	"100.000"	"56.6935"	"18070"	"18070"	"18063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"34.6"	""	"48.1"	""	"74.6"	""	"64.6"	"62.1"	""	"895"	"75"	"36.000"	"29.000"	"1.58778991682025E-06"	"23"	"0"	"6.287E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"513.95471"	"1539.84958"	"1539.85146"	"-1.22"	"-0.00063"	"13/94"	"13"	"94"	"2866327.97668457"	"HCD"	"MS2"	"12.69765"	"32.2"	"100.000"	"57.2905"	"18312"	"18312"	"18295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.2"	""	"43.7"	""	"45.3"	""	"45.6"	""	"59.0"	"73.3"	""	"895"	"51"	"36.000"	"29.000"	"0.000377392304099513"	"20"	"0"	"7.115E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9605"	"0.0000"	"1"	"1"	"1"	"513.95477"	"1539.84977"	"1539.85146"	"-1.10"	"-0.00057"	"10/94"	"10"	"94"	"7972527.43005371"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"57.0272"	"18171"	"18171"	"18156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"34.2"	""	"42.1"	""	"72.6"	"0.6"	"56.8"	"48.5"	""	"897"	"76"	"36.000"	"29.000"	"1.02982266867839E-06"	"20"	"0"	"1.77E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9770"	"0.0000"	"1"	"1"	"1"	"513.95477"	"1539.84977"	"1539.85146"	"-1.10"	"-0.00057"	"11/94"	"11"	"94"	"10690874.0778809"	"HCD"	"MS2"	"2.062729"	"37.0"	"100.000"	"56.4136"	"17957"	"17957"	"17945"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.8"	""	"38.8"	""	"43.1"	""	"103.4"	"0.3"	"66.0"	"60.3"	""	"897"	"87"	"36.000"	"29.000"	"8.21793018433487E-08"	"20"	"0"	"5.195E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"513.95483"	"1539.84995"	"1539.85146"	"-0.98"	"-0.00051"	"9/94"	"9"	"94"	"11408866.8915405"	"HCD"	"MS2"	"2.012578"	"38.9"	"100.000"	"56.7406"	"18054"	"18054"	"18043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"42.6"	""	"48.7"	""	"109.6"	""	"63.5"	"63.5"	""	"889"	"59"	"36.000"	"29.000"	"5.57021252261459E-05"	"18"	"0"	"4.514E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"513.95496"	"1539.85031"	"1539.85146"	"-0.75"	"-0.00038"	"10/94"	"10"	"94"	"12478435.3796387"	"HCD"	"MS2"	"1.212378"	"42.1"	"100.000"	"56.9986"	"18194"	"18194"	"18182"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"50.2"	""	"64.3"	""	"105.1"	""	"71.8"	"61.4"	""	"889"	"75"	"36.000"	"29.000"	"1.36418027383987E-06"	"20"	"0"	"2.381E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"513.95508"	"1539.85068"	"1539.85146"	"-0.51"	"-0.00026"	"9/94"	"9"	"94"	"13109911.4136963"	"HCD"	"MS2"	"1.462407"	"46.8"	"100.000"	"57.3095"	"18285"	"18285"	"18280"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.5"	""	"50.7"	""	"68.6"	""	"111.2"	""	"78.1"	"80.2"	""	"888"	"63"	"36.000"	"29.000"	"2.06720225524194E-05"	"20"	"0"	"2.752E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"513.95514"	"1539.85086"	"1539.85146"	"-0.39"	"-0.00020"	"9/94"	"9"	"94"	"2074492.12237549"	"HCD"	"MS2"	"16.75589"	"31.8"	"100.000"	"57.6174"	"18410"	"18410"	"18391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"36.4"	""	"50.7"	""	"49.1"	""	"60.1"	"59.4"	""	"889"	"53"	"36.000"	"29.000"	"0.000235978135460674"	"20"	"0"	"3.361E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"513.95520"	"1539.85105"	"1539.85146"	"-0.27"	"-0.00014"	"9/94"	"9"	"94"	"4007657.50958252"	"HCD"	"MS2"	"11.79404"	"38.1"	"100.000"	"56.1180"	"17838"	"17838"	"17822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.7"	""	"45.4"	""	"55.0"	""	"89.3"	""	"65.9"	"64.3"	""	"886"	"51"	"36.000"	"29.000"	"0.000332968942050065"	"20"	"0"	"7.614E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MVIPGGIDVHTR"	"[R].mVIPGGIDVHTR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"513.95532"	"1539.85141"	"1539.85146"	"-0.03"	"-0.00002"	"9/94"	"9"	"94"	"3483384.84631348"	"HCD"	"MS2"	"0"	"28.4"	"100.000"	"56.4701"	"17946"	"17946"	"17931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"32.8"	""	"39.0"	""	"63.2"	""	"54.2"	"51.7"	""	"883"	"38"	"36.000"	"29.000"	"0.00675975114332616"	"19"	"0"	"0.0003852"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYESIEEAK"	"[K].iYESIEEAk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"770.43793"	"1539.86858"	"1539.86705"	"0.99"	"0.00077"	"9/72"	"9"	"72"	"157993.78137207"	"HCD"	"MS2"	"23.35605"	"15.0"	"100.000"	"91.4731"	"32151"	"32151"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"20.4"	""	"21.5"	""	"22.2"	""	"26.9"	"31.0"	""	"838"	"19"	"36.000"	"29.000"	"0.569133334120018"	"17"	"0.001596"	"0.01301"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNPLDPVLAK"	"[K].dNPLDPVLAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"513.97632"	"1539.91440"	"1539.91466"	"-0.17"	"-0.00009"	"12/96"	"12"	"96"	"454781.145874023"	"HCD"	"MS2"	"32.45816"	"16.7"	"100.000"	"98.5895"	"35023"	"35023"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"17.9"	""	"22.0"	""	"26.0"	"1.0"	"38.5"	"35.8"	""	"587"	"33"	"34.000"	"27.000"	"0.0157256318980166"	"16"	"9.9E-05"	"0.0008027"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNPLDPVLAK"	"[K].dNPLDPVLAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"770.46130"	"1539.91533"	"1539.91466"	"0.43"	"0.00033"	"10/96"	"10"	"96"	"197759.675170898"	"HCD"	"MS2"	"25.94444"	"15.5"	"100.000"	"98.5803"	"35019"	"35019"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"19.0"	""	"21.0"	""	"28.7"	""	"34.2"	"24.4"	""	"552"	"42"	"34.000"	"27.000"	"0.00194943644976578"	"16"	"9.9E-05"	"0.0007548"	"0.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNPLDPVLAK"	"[K].dNPLDPVLAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"770.46130"	"1539.91533"	"1539.91466"	"0.43"	"0.00033"	"10/96"	"10"	"96"	"199909.11151123"	"HCD"	"MS2"	"39.56523"	"15.5"	"100.000"	"98.5289"	"34969"	"34969"	"34943"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"22.0"	""	"18.3"	""	"21.0"	""	"35.5"	"31.7"	""	"552"	"39"	"34.000"	"27.000"	"0.00337994070997153"	"15"	"9.9E-05"	"0.0005858"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNPLDPVLAK"	"[K].dNPLDPVLAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"Q5RJR8"	"Leucine-rich repeat-containing protein 59 OS=Rattus norvegicus OX=10116 GN=Lrrc59 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"513.97687"	"1539.91605"	"1539.91466"	"0.90"	"0.00046"	"11/96"	"11"	"96"	"614825.635925293"	"HCD"	"MS2"	"40.86357"	"20.7"	"100.000"	"98.6027"	"34999"	"34999"	"34970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"23.1"	""	"21.5"	""	"40.1"	""	"48.3"	"46.5"	""	"557"	"34"	"34.000"	"27.000"	"0.0111641380859204"	"15"	"0"	"5.628E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVAMESFAK"	"[K].eAVAMESFAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"770.92584"	"1540.84441"	"1540.84454"	"-0.08"	"-0.00006"	"7/84"	"7"	"84"	"240726.258728027"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"86.1080"	"29961"	"29961"	"29945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"30.8"	""	"26.9"	""	"29.1"	""	"46.9"	"40.9"	""	"857"	"40"	"36.000"	"29.000"	"0.00408273156284134"	"23"	"0"	"0.0002542"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVAMESFAK"	"[K].eAVAMESFAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"770.92639"	"1540.84551"	"1540.84454"	"0.63"	"0.00049"	"12/84"	"12"	"84"	"257188.968078613"	"HCD"	"MS2"	"7.624937"	"22.1"	"100.000"	"86.0703"	"29977"	"29977"	"29951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.0"	""	"31.2"	""	"31.4"	""	"29.3"	"0.7"	"43.1"	"42.4"	""	"859"	"41"	"36.000"	"29.000"	"0.00338815420517169"	"21"	"0"	"0.0001099"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDDFFPGSDR"	"[R].aWDDFFPGSDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"771.36426"	"1541.72124"	"1541.72222"	"-0.64"	"-0.00049"	"9/94"	"9"	"94"	"2247451.5199585"	"HCD"	"MS2"	"0"	"113.8"	"100.000"	"111.5687"	"40145"	"40145"	"40119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"159.7"	""	"153.4"	""	"148.0"	""	"183.6"	""	"216.6"	"217.5"	""	"400"	"34"	"33.000"	"26.000"	"0.00770956715331544"	"19"	"0"	"0.0001864"	"0.598"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWDDFFPGSDR"	"[R].aWDDFFPGSDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"Q9ES40"	"PRA1 family protein 3 OS=Rattus norvegicus OX=10116 GN=Arl6ip5 PE=1 SV=1"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"771.36450"	"1541.72173"	"1541.72222"	"-0.32"	"-0.00025"	"13/94"	"13"	"94"	"2198041.60522461"	"HCD"	"MS2"	"2.708135"	"100.8"	"100.000"	"111.6523"	"40192"	"40192"	"40172"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.6"	""	"138.5"	""	"139.3"	""	"157.6"	"1.1"	"185.4"	"200.0"	""	"401"	"40"	"33.000"	"26.000"	"0.00211404572726447"	"22"	"0"	"2.044E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESTLNYGMER"	"[R].lESTLNYGMER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"771.39465"	"1541.78203"	"1541.78311"	"-0.70"	"-0.00054"	"7/106"	"7"	"106"	"501194.823608398"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"83.5547"	"28932"	"28932"	"28921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"53.3"	""	"54.5"	""	"38.8"	""	"59.6"	"65.2"	""	"758"	"35"	"35.000"	"28.000"	"0.0119025279497909"	"17"	"0"	"4.584E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESTLNYGMER"	"[R].lESTLNYGMER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.39508"	"1541.78288"	"1541.78311"	"-0.15"	"-0.00011"	"7/106"	"7"	"106"	"254501.474182129"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"83.2663"	"28815"	"28815"	"28791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"31.8"	""	"26.4"	""	"24.9"	"1.2"	"38.9"	"34.8"	""	"758"	"40"	"35.000"	"28.000"	"0.00372082470404574"	"15"	"0"	"0.0002703"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESTLNYGMER"	"[R].lESTLNYGMER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"771.39520"	"1541.78313"	"1541.78311"	"0.01"	"0.00001"	"10/106"	"10"	"106"	"370513.412536621"	"HCD"	"MS2"	"3.792433"	"27.8"	"100.000"	"83.6299"	"28990"	"28990"	"28980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.8"	""	"45.5"	""	"41.7"	""	"26.8"	"2.2"	"49.5"	"47.1"	""	"755"	"53"	"35.000"	"28.000"	"0.00020272950312977"	"22"	"0"	"1.418E-06"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LESTLNYGMER"	"[R].lESTLNYGMER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"771.39551"	"1541.78374"	"1541.78311"	"0.41"	"0.00031"	"6/106"	"6"	"106"	"322002.471191406"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"83.3325"	"28870"	"28870"	"28848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"31.7"	""	"35.0"	""	"37.6"	""	"46.2"	"46.9"	""	"759"	"36"	"35.000"	"28.000"	"0.010380344816334"	"20"	"9.9E-05"	"0.0004563"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAFDPFDK"	"[R].dEAFDPFDk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"771.39722"	"1541.78716"	"1541.78880"	"-1.06"	"-0.00082"	"6/78"	"6"	"78"	"332657.417175293"	"HCD"	"MS2"	"4.533903"	"29.8"	"100.000"	"104.3693"	"37328"	"37328"	"37310"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.5"	""	"30.9"	""	"38.3"	""	"52.5"	""	"59.5"	"62.2"	""	"773"	"33"	"35.000"	"28.000"	"0.0191491498746052"	"26"	"0.0001991"	"0.004185"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEAFDPFDK"	"[R].dEAFDPFDk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"771.39856"	"1541.78984"	"1541.78880"	"0.68"	"0.00052"	"11/78"	"11"	"78"	"285496.337463379"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"104.6675"	"37466"	"37466"	"37453"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"21.5"	""	"31.2"	""	"51.3"	""	"56.0"	"61.3"	""	"793"	"31"	"35.000"	"28.000"	"0.0300084242875816"	""	"0.0001991"	"0.002651"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLGTPTQPGSTPR"	"[R].tLGTPTQPGSTPR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FY1"	"Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1"	"Q68FY1"	"Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"3"	"771.42712"	"1541.84697"	"1541.84849"	"-0.98"	"-0.00076"	"7/128"	"7"	"128"	"700160.277099609"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"39.9936"	"11293"	"11293"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"38.6"	""	"62.1"	""	"86.9"	""	"142.1"	"167.3"	""	"853"	"10"	"36.000"	"29.000"	"4.65499303495395"	"14"	"0.002834"	"0.02997"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFALQNPGVVPR"	"[R].dFALQNPGVVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"514.62585"	"1541.86301"	"1541.86374"	"-0.48"	"-0.00024"	"13/102"	"13"	"102"	"632811.645629883"	"HCD"	"MS2"	"24.11551"	"13.4"	"100.000"	"91.9470"	"32307"	"32307"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"18.1"	""	"21.7"	""	"19.1"	""	"23.5"	"23.9"	""	"789"	"34"	"35.000"	"28.000"	"0.0148952229320077"	"21"	"0"	"2.196E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFALQNPGVVPR"	"[R].dFALQNPGVVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"771.43604"	"1541.86479"	"1541.86374"	"0.68"	"0.00053"	"14/102"	"14"	"102"	"680439.613525391"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"91.7184"	"32214"	"32214"	"32196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.3"	""	"62.5"	""	"49.2"	""	"58.6"	"0.4"	"63.0"	"60.6"	""	"791"	"46"	"35.000"	"28.000"	"0.000922882663632136"	"20"	"0"	"8.458E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFALQNPGVVPR"	"[R].dFALQNPGVVPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"P35859"	"Insulin-like growth factor-binding protein complex acid labile subunit OS=Rattus norvegicus OX=10116 GN=Igfals PE=1 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"771.43719"	"1541.86711"	"1541.86374"	"2.19"	"0.00169"	"9/102"	"9"	"102"	"481388.108764648"	"HCD"	"MS2"	"0"	"30.5"	"100.000"	"91.5724"	"32191"	"32191"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"57.3"	""	"41.2"	""	"49.9"	"2.2"	"45.2"	"44.6"	""	"791"	"53"	"35.000"	"28.000"	"0.000191490171379511"	"18"	"0"	"5.706E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLNHENLK"	"[K].tDLNHENLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"514.62744"	"1541.86777"	"1541.86878"	"-0.65"	"-0.00034"	"7/84"	"7"	"84"	"6199501.17144775"	"HCD"	"MS2"	"7.159099"	"205.4"	"100.000"	"39.6769"	"11165"	"11165"	"11150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"362.2"	""	"121.1"	""	"125.9"	""	"72.6"	""	"101.6"	"1179.0"	""	"796"	"40"	"35.000"	"29.000"	"0.0035882531276717"	"19"	"0"	"0.000139"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDLNHENLK"	"[K].tDLNHENLk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"514.62744"	"1541.86777"	"1541.86878"	"-0.65"	"-0.00034"	"7/84"	"7"	"84"	"7311879.82147217"	"HCD"	"MS2"	"9.608832"	"250.7"	"100.000"	"39.6717"	"11129"	"11129"	"11112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"500.1"	""	"137.8"	""	"120.2"	""	"83.9"	""	"97.4"	"1455.3"	""	"796"	"44"	"35.000"	"29.000"	"0.00158446653880292"	"21"	"0"	"9.178E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"514.96039"	"1542.86661"	"1542.84860"	"11.68"	"0.00600"	"16/162"	"16"	"162"	"5379671.7366333"	"HCD"	"MS2"	"53.66521"	"59.8"	"100.000"	"62.6803"	"20501"	"20501"	"20483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"65.8"	""	"69.9"	""	"105.0"	"2.8"	"126.9"	"123.2"	"NoQuanLabels"	"835"	"63"	"36.000"	"29.000"	"1.91715170359393E-05"	"23"	"0"	"1.786E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALPGELTQSR"	"[K].eLALPGELTQSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"3"	"3"	"0.6739"	"0.0000"	"1"	"1"	"1"	"514.96063"	"1542.86734"	"1542.86889"	"-1.00"	"-0.00051"	"12/112"	"12"	"112"	"458855.010131836"	"HCD"	"MS2"	"29.13535"	"7.9"	"100.000"	"95.8811"	"33930"	"33930"	"33906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"10.3"	""	"9.9"	""	"13.4"	""	"15.9"	"16.6"	""	"837"	"46"	"36.000"	"29.000"	"0.0011186531820256"	""	"0"	"0.0001373"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1882"	"0.0000"	"1"	"1"	"1"	"771.93750"	"1542.86772"	"1542.84860"	"12.40"	"0.00956"	"10/162"	"10"	"162"	"6042883.36779785"	"HCD"	"MS2"	"6.462932"	"221.1"	"100.000"	"62.5676"	"20455"	"20455"	"20437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"337.7"	""	"298.4"	""	"224.5"	""	"392.7"	"2.7"	"435.2"	"405.1"	"NoQuanLabels"	"815"	"85"	"36.000"	"29.000"	"1.22215872648747E-07"	""	"0"	"7.921E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1646"	"0.0000"	"1"	"1"	"1"	"771.93768"	"1542.86809"	"1542.84860"	"12.63"	"0.00975"	"10/162"	"10"	"162"	"1071399.23693848"	"HCD"	"MS2"	"16.66472"	"56.2"	"100.000"	"62.8854"	"20584"	"20584"	"20564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.3"	""	"59.6"	""	"62.7"	""	"103.1"	"0.8"	"117.0"	"105.9"	"NoQuanLabels"	"814"	"79"	"36.000"	"29.000"	"4.98418793100874E-07"	""	"0"	"1.101E-05"	"0.851"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALPGELTQSR"	"[K].eLALPGELTQSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"771.93774"	"1542.86821"	"1542.86889"	"-0.44"	"-0.00034"	"5/112"	"5"	"112"	"416395.683776855"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"95.8950"	"33935"	"33935"	"33922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.0"	""	"21.4"	""	"23.8"	""	"36.6"	""	"43.6"	"44.5"	""	"803"	"27"	"36.000"	"29.000"	"0.0751078879356869"	"24"	"0.0001991"	"0.002314"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALPGELTQSR"	"[K].eLALPGELTQSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"514.96094"	"1542.86826"	"1542.86889"	"-0.41"	"-0.00021"	"13/112"	"13"	"112"	"503645.078857422"	"HCD"	"MS2"	"30.27214"	"9.9"	"100.000"	"95.8699"	"33893"	"33893"	"33866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.4"	""	"11.2"	""	"14.6"	""	"15.1"	""	"20.9"	"18.5"	""	"801"	"48"	"36.000"	"29.000"	"0.000689608364281895"	"19"	"0"	"7.401E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.1385"	"0.0000"	"1"	"1"	"1"	"514.96094"	"1542.86826"	"1542.84860"	"12.74"	"0.00655"	"15/162"	"15"	"162"	"2237140.80761719"	"HCD"	"MS2"	"53.90374"	"33.6"	"100.000"	"62.3642"	"20339"	"20339"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.0"	""	"45.7"	""	"40.6"	""	"57.7"	"0.4"	"61.7"	"58.1"	"NoQuanLabels"	"801"	"65"	"36.000"	"29.000"	"1.32313001185244E-05"	"22"	"0"	"8.043E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELALPGELTQSR"	"[K].eLALPGELTQSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"771.93793"	"1542.86858"	"1542.86889"	"-0.20"	"-0.00015"	"7/112"	"7"	"112"	"437636.971923828"	"HCD"	"MS2"	"4.479787"	"21.5"	"100.000"	"95.8911"	"33901"	"33901"	"33881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"24.1"	""	"26.2"	""	"36.6"	""	"44.9"	"40.3"	""	"801"	"39"	"36.000"	"29.000"	"0.00510037983947172"	"24"	"0.0001686"	"0.001052"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.1579"	"0.0000"	"1"	"1"	"1"	"514.96106"	"1542.86863"	"1542.84860"	"12.98"	"0.00668"	"16/162"	"16"	"162"	"6443676.69116211"	"HCD"	"MS2"	"50.82565"	"59.8"	"100.000"	"62.6616"	"20460"	"20460"	"20443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.2"	""	"70.8"	""	"59.3"	""	"101.2"	"2.5"	"123.9"	"122.7"	"NoQuanLabels"	"801"	"57"	"36.000"	"29.000"	"8.04641671449795E-05"	"19"	"0"	"2.47E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"771.93799"	"1542.86870"	"1542.84860"	"13.03"	"0.01005"	"9/162"	"9"	"162"	"1254616.79467773"	"HCD"	"MS2"	"17.52518"	"63.2"	"100.000"	"62.9146"	"20563"	"20563"	"20545"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.0"	""	"75.0"	""	"66.5"	""	"109.9"	"0.7"	"124.9"	"128.8"	"NoQuanLabels"	"801"	"60"	"36.000"	"29.000"	"3.96828193929553E-05"	"24"	"0"	"0.0003001"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1446"	"0.0000"	"1"	"1"	"1"	"771.93811"	"1542.86894"	"1542.84860"	"13.19"	"0.01017"	"10/162"	"10"	"162"	"1250455.65509033"	"HCD"	"MS2"	"6.586912"	"53.7"	"100.000"	"62.2751"	"20336"	"20336"	"20313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.1"	""	"76.7"	""	"58.7"	""	"94.6"	""	"102.4"	"95.8"	"NoQuanLabels"	"801"	"83"	"36.000"	"29.000"	"2.17571757762719E-07"	""	"0"	"6.808E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1948"	"0.0000"	"1"	"1"	"1"	"771.93817"	"1542.86907"	"1542.84860"	"13.27"	"0.01023"	"10/162"	"10"	"162"	"6321186.51104736"	"HCD"	"MS2"	"5.796937"	"234.4"	"100.000"	"62.6201"	"20444"	"20444"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"362.9"	""	"323.8"	""	"237.1"	""	"395.8"	"3.7"	"463.8"	"435.9"	"NoQuanLabels"	"801"	"77"	"36.000"	"29.000"	"8.32918523185031E-07"	""	"9.9E-05"	"0.0004894"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"771.93854"	"1542.86980"	"1542.84860"	"13.74"	"0.01060"	"20/162"	"20"	"162"	"1341781.03790283"	"HCD"	"MS2"	"7.198324"	"56.0"	"100.000"	"62.3295"	"20325"	"20325"	"20301"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.3"	""	"73.8"	""	"64.4"	""	"98.2"	"0.2"	"101.1"	"102.5"	"NoQuanLabels"	"811"	"72"	"36.000"	"29.000"	"2.30669863457178E-06"	""	"0"	"8.982E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKSSTVAPTLPGEVR"	"[K].TKSSTVAPTLPGEVR.[T]"	""	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"1"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"514.96179"	"1542.87082"	"1542.84860"	"14.41"	"0.00741"	"16/162"	"16"	"162"	"2692530.24603271"	"HCD"	"MS2"	"77.33752"	"50.2"	"100.000"	"62.3235"	"20356"	"20356"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.4"	""	"72.4"	""	"57.2"	""	"92.9"	"2.3"	"88.8"	"93.3"	"NoQuanLabels"	"804"	"52"	"36.000"	"29.000"	"0.000264378450616879"	"24"	"0.0001991"	"0.002461"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"772.39935"	"1543.79143"	"1543.79539"	"-2.56"	"-0.00198"	"7/92"	"7"	"92"	"522127.189941406"	"HCD"	"MS2"	"4.975706"	"36.6"	"100.000"	"75.1104"	"25511"	"25511"	"25492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.0"	""	"41.5"	""	"48.9"	""	"60.9"	""	"74.1"	"73.5"	""	"736"	"27"	"35.000"	"28.000"	"0.075831180808336"	"20"	"0"	"0.0002189"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"772.40070"	"1543.79411"	"1543.79539"	"-0.82"	"-0.00064"	"8/92"	"8"	"92"	"1261653.13421631"	"HCD"	"MS2"	"0"	"73.5"	"100.000"	"74.6756"	"25366"	"25366"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.2"	""	"96.1"	""	"99.7"	""	"100.2"	"1.7"	"133.3"	"143.4"	""	"735"	"54"	"35.000"	"28.000"	"0.000145297232875037"	"21"	"0"	"1.016E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"772.40076"	"1543.79424"	"1543.79539"	"-0.75"	"-0.00058"	"8/92"	"8"	"92"	"1034193.97131348"	"HCD"	"MS2"	"0"	"62.4"	"100.000"	"74.5339"	"25278"	"25278"	"25262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.1"	""	"86.1"	""	"81.2"	""	"92.4"	""	"120.3"	"119.2"	""	"736"	"50"	"35.000"	"28.000"	"0.000374841630803915"	"21"	"0"	"6.45E-06"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"772.40149"	"1543.79570"	"1543.79539"	"0.20"	"0.00016"	"9/92"	"9"	"92"	"3113717.81903076"	"HCD"	"MS2"	"0"	"163.6"	"100.000"	"74.8131"	"25391"	"25391"	"25375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.3"	""	"235.6"	""	"227.6"	""	"225.8"	""	"304.7"	"319.4"	""	"736"	"57"	"35.000"	"28.000"	"7.32567788747285E-05"	"22"	"0"	"1.014E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLNQDYETLR"	"[K].yLNQDYETLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"Q07009"	"Calpain-2 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn2 PE=1 SV=3"	"0"	"2"	"2"	"0.9074"	"0.0000"	"1"	"1"	"1"	"772.40198"	"1543.79668"	"1543.79539"	"0.84"	"0.00065"	"8/92"	"8"	"92"	"2737633.20446777"	"HCD"	"MS2"	"0"	"145.8"	"100.000"	"74.9778"	"25489"	"25489"	"25472"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"227.7"	""	"175.7"	""	"200.7"	""	"203.2"	"0.0"	"283.5"	"291.3"	""	"742"	"54"	"35.000"	"28.000"	"0.000152185722208031"	"21"	"0"	"4.208E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"772.42511"	"1543.84294"	"1543.84420"	"-0.82"	"-0.00063"	"8/74"	"8"	"74"	"609400.295043945"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"82.8524"	"28676"	"28676"	"28662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"29.9"	""	"32.7"	""	"224.5"	"0.9"	"80.9"	"87.2"	""	"872"	"37"	"36.000"	"29.000"	"0.00830780873031975"	"17"	"9.9E-05"	"0.000914"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.42523"	"1543.84319"	"1543.84420"	"-0.66"	"-0.00051"	"6/74"	"6"	"74"	"197435.042907715"	"HCD"	"MS2"	"31.34237"	"18.6"	"100.000"	"82.5785"	"28565"	"28565"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"11.1"	""	"15.2"	""	"75.5"	""	"34.1"	"28.3"	""	"878"	"6"	"36.000"	"29.000"	"10.3386663563035"	"13"	"0.009514"	"0.1268"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"772.42535"	"1543.84343"	"1543.84420"	"-0.50"	"-0.00039"	"7/74"	"7"	"74"	"220500.538024902"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"81.3662"	"28076"	"28076"	"28055"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.9"	""	"16.9"	""	"15.9"	""	"69.3"	""	"28.5"	"34.5"	""	"877"	"29"	"36.000"	"29.000"	"0.0538232102862962"	"16"	"0.001615"	"0.01405"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.42578"	"1543.84429"	"1543.84420"	"0.05"	"0.00004"	"7/74"	"7"	"74"	"176696.015258789"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"82.5028"	"28506"	"28506"	"28476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"12.8"	""	"10.7"	""	"58.5"	""	"27.9"	"24.7"	""	"887"	"25"	"36.000"	"29.000"	"0.156276481307343"	"14"	"0.002189"	"0.02079"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"772.42578"	"1543.84429"	"1543.84420"	"0.05"	"0.00004"	"8/74"	"8"	"74"	"229355.784851074"	"HCD"	"MS2"	"8.98148"	"23.0"	"100.000"	"83.1600"	"28800"	"28800"	"28780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"16.8"	""	"22.7"	""	"74.6"	"0.9"	"42.9"	"35.1"	""	"887"	"45"	"36.000"	"29.000"	"0.00128497188114553"	"18"	"0.001348"	"0.01101"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.42596"	"1543.84465"	"1543.84420"	"0.29"	"0.00022"	"8/74"	"8"	"74"	"264370.188537598"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"81.3041"	"28024"	"28024"	"27998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"17.3"	""	"17.0"	""	"81.1"	"1.0"	"36.6"	"39.2"	""	"949"	"36"	"36.000"	"29.000"	"0.0115940779725329"	"15"	"0.001261"	"0.009913"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"772.42596"	"1543.84465"	"1543.84420"	"0.29"	"0.00022"	"8/74"	"8"	"74"	"622863.751342773"	"HCD"	"MS2"	"0"	"48.4"	"100.000"	"82.8133"	"28631"	"28631"	"28615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"28.6"	""	"29.0"	""	"209.8"	"1.7"	"74.3"	"90.3"	""	"949"	"42"	"36.000"	"29.000"	"0.00273675686879623"	"16"	"0.000264"	"0.00605"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.42603"	"1543.84477"	"1543.84420"	"0.37"	"0.00029"	"7/74"	"7"	"74"	"555177.427307129"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"81.6040"	"28144"	"28144"	"28128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.6"	""	"24.1"	""	"25.5"	""	"161.4"	"0.5"	"67.4"	"75.1"	""	"947"	"38"	"36.000"	"29.000"	"0.00743566787851937"	"15"	"0.0001991"	"0.002008"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSAMLEYLK"	"[K].dSAmLEYLk.[I]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"P31977"	"Ezrin OS=Rattus norvegicus OX=10116 GN=Ezr PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"772.42615"	"1543.84502"	"1543.84420"	"0.53"	"0.00041"	"8/74"	"8"	"74"	"540483.775939941"	"HCD"	"MS2"	"3.110353"	"41.8"	"100.000"	"81.6844"	"28205"	"28205"	"28184"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"25.8"	""	"26.3"	""	"164.9"	""	"76.9"	"66.4"	""	"938"	"38"	"36.000"	"29.000"	"0.00731430123825841"	"18"	"0.001348"	"0.01072"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAVGFEYQGK"	"[QK].sAVGFEYQGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"Q66HL2"	"Src substrate cortactin OS=Rattus norvegicus OX=10116 GN=Cttn PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"3"	"515.29205"	"1543.86161"	"1543.85206"	"6.18"	"0.00318"	"6/86"	"6"	"86"	"572753.987609863"	"HCD"	"MS2"	"27.34929"	"21.3"	"100.000"	"68.3930"	"22818"	"22818"	"22794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"25.6"	""	"24.0"	""	"34.9"	""	"44.8"	"41.9"	""	"976"	"4"	"36.000"	"29.000"	"18.9854030757209"	"13"	"0.004314"	"0.05094"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAGDQLLSVDGR"	"[R].lAAGDQLLSVDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.9302"	"0.0000"	"1"	"1"	"1"	"772.43530"	"1543.86333"	"1543.86414"	"-0.52"	"-0.00040"	"10/122"	"10"	"122"	"661889.650512695"	"HCD"	"MS2"	"41.83449"	"44.2"	"100.000"	"95.6252"	"33826"	"33826"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.8"	""	"51.9"	""	"56.0"	""	"68.9"	""	"87.7"	"110.3"	""	"966"	"43"	"36.000"	"29.000"	"0.00242631470739313"	"18"	"0"	"5.124E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAGDQLLSVDGR"	"[R].lAAGDQLLSVDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"772.43561"	"1543.86394"	"1543.86414"	"-0.13"	"-0.00010"	"11/122"	"11"	"122"	"844032.575073242"	"HCD"	"MS2"	"46.16679"	"52.3"	"100.000"	"95.5863"	"33778"	"33778"	"33761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"59.5"	""	"87.6"	""	"67.6"	""	"108.9"	"118.2"	""	"946"	"53"	"36.000"	"29.000"	"0.000264765345507187"	"24"	"0"	"8.747E-07"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAGDQLLSVDGR"	"[R].lAAGDQLLSVDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"772.43585"	"1543.86443"	"1543.86414"	"0.19"	"0.00015"	"15/122"	"15"	"122"	"513860.745056152"	"HCD"	"MS2"	"61.06322"	"34.3"	"100.000"	"95.3024"	"33663"	"33663"	"33634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"39.6"	""	"45.8"	""	"54.9"	""	"73.3"	"72.2"	""	"942"	"31"	"36.000"	"29.000"	"0.0371553115398339"	"21"	"0"	"0.0001415"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAGDQLLSVDGR"	"[R].lAAGDQLLSVDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"O35889"	"Afadin OS=Rattus norvegicus OX=10116 GN=Afdn PE=1 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"772.43726"	"1543.86724"	"1543.86414"	"2.01"	"0.00155"	"10/122"	"10"	"122"	"616286.846252441"	"HCD"	"MS2"	"49.65527"	"43.1"	"100.000"	"95.3275"	"33706"	"33706"	"33680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.8"	""	"47.8"	""	"57.2"	""	"67.9"	""	"86.8"	"100.9"	""	"934"	"57"	"36.000"	"29.000"	"9.27506326405892E-05"	"20"	"0"	"7.39E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"772.91833"	"1544.82939"	"1544.83039"	"-0.65"	"-0.00050"	"11/120"	"11"	"120"	"350601.713317871"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"77.5557"	"26528"	"26528"	"26508"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"23.7"	""	"17.4"	""	"26.4"	""	"41.6"	"39.1"	""	"1008"	"19"	"37.000"	"30.000"	"0.694113572322549"	"22"	"0.0001686"	"0.001064"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"772.91846"	"1544.82964"	"1544.83039"	"-0.49"	"-0.00038"	"5/120"	"5"	"120"	"346435.119506836"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"77.5163"	"26484"	"26484"	"26465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"25.3"	""	"24.3"	""	"30.9"	""	"41.4"	"49.0"	""	"1007"	"14"	"37.000"	"30.000"	"2.10377589606574"	"19"	"0.0001991"	"0.005853"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"772.91888"	"1544.83049"	"1544.83039"	"0.06"	"0.00005"	"8/120"	"8"	"120"	"474169.931152344"	"HCD"	"MS2"	"5.188615"	"23.3"	"100.000"	"77.8103"	"26603"	"26603"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"26.3"	""	"27.4"	""	"28.2"	"0.5"	"49.9"	"58.6"	""	"1003"	"27"	"37.000"	"30.000"	"0.0929546109142528"	"19"	"0.0001991"	"0.003652"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPMASEGLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"772.91931"	"1544.83135"	"1544.83039"	"0.62"	"0.00048"	"9/120"	"9"	"120"	"575217.541137695"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"77.8494"	"26646"	"26646"	"26628"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"39.0"	""	"37.7"	"2.2"	"42.1"	""	"59.3"	"53.6"	""	"1004"	"37"	"37.000"	"30.000"	"0.010392109570931"	"23"	"0.0001686"	"0.001378"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYYDQEQK"	"[K].lYYDQEQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"515.61615"	"1544.83390"	"1544.83608"	"-1.41"	"-0.00073"	"6/66"	"6"	"66"	"545081.826293945"	"HCD"	"MS2"	"57.84755"	"25.3"	"100.000"	"59.6425"	"19270"	"19270"	"19243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"28.6"	""	"32.3"	""	"40.7"	""	"57.8"	"55.7"	""	"989"	"12"	"36.000"	"29.000"	"3.04906228420503"	"14"	"0.006033"	"0.07399"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYYDQEQK"	"[K].lYYDQEQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"515.61719"	"1544.83701"	"1544.83608"	"0.60"	"0.00031"	"6/66"	"6"	"66"	"1036986.13708496"	"HCD"	"MS2"	"26.72813"	"38.9"	"100.000"	"59.5849"	"19213"	"19213"	"19189"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"41.2"	""	"32.5"	""	"82.7"	""	"88.4"	"92.2"	""	"980"	"28"	"36.000"	"29.000"	"0.0769477774123441"	"23"	"0.001406"	"0.01153"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYYDQEQK"	"[K].lYYDQEQk.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"515.61804"	"1544.83957"	"1544.83608"	"2.26"	"0.00116"	"6/66"	"6"	"66"	"1022858.43487549"	"HCD"	"MS2"	"54.0009"	"40.1"	"100.000"	"59.3271"	"19143"	"19143"	"19118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.5"	""	"40.5"	""	"37.4"	""	"82.1"	""	"89.9"	"91.6"	""	"980"	"27"	"36.000"	"29.000"	"0.0984455478178278"	"25"	"0.002628"	"0.02745"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"515.62036"	"1544.84653"	"1544.84815"	"-1.05"	"-0.00054"	"11/120"	"11"	"120"	"507318.04095459"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"100.3031"	"35688"	"35688"	"35660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"11.1"	""	"13.3"	""	"17.0"	"1.4"	"17.9"	"16.8"	""	"1009"	"50"	"37.000"	"30.000"	"0.000496433602856492"	"28"	"0"	"0.0002463"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7432"	"0.0000"	"1"	"1"	"1"	"772.92755"	"1544.84783"	"1544.84815"	"-0.21"	"-0.00016"	"10/120"	"10"	"120"	"300523.05871582"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"100.3435"	"35732"	"35732"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"27.1"	""	"18.2"	""	"25.7"	""	"31.2"	"30.4"	""	"991"	"74"	"36.000"	"29.000"	"1.81988379896801E-06"	""	"0"	"1.918E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"772.92798"	"1544.84868"	"1544.84815"	"0.34"	"0.00026"	"7/120"	"7"	"120"	"266948.882202148"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"100.2015"	"35647"	"35647"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"22.7"	""	"17.2"	""	"26.7"	""	"20.7"	"31.3"	""	"996"	"42"	"36.000"	"29.000"	"0.00300766417429438"	"25"	"0"	"1.488E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.92822"	"1544.84917"	"1544.84815"	"0.66"	"0.00051"	"4/120"	"4"	"120"	"128298.650085449"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"100.5202"	"35776"	"35776"	"35755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"17.0"	""	"9.1"	""	"14.3"	""	"18.9"	"19.5"	""	"995"	"15"	"36.000"	"29.000"	"1.58413826705875"	"14"	"0.006958"	"0.08781"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNTEIGDLEGLR"	"[K].vNTEIGDLEGLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"515.62134"	"1544.84946"	"1544.84815"	"0.85"	"0.00044"	"12/120"	"12"	"120"	"346698.923217773"	"HCD"	"MS2"	"3.16405"	"7.4"	"100.000"	"100.4936"	"35793"	"35793"	"35769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"12.7"	""	"9.8"	""	"11.6"	""	"12.5"	"13.8"	""	"989"	"42"	"36.000"	"29.000"	"0.00297965715313769"	"27"	"0"	"0.0002102"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVENAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.6809"	"0.0000"	"1"	"1"	"1"	"515.63940"	"1544.90366"	"1544.90483"	"-0.76"	"-0.00039"	"11/98"	"11"	"98"	"1574287.12896729"	"HCD"	"MS2"	"29.2187"	"49.0"	"100.000"	"68.6350"	"22917"	"22917"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.6"	""	"67.3"	""	"61.7"	""	"76.9"	"1.3"	"90.3"	"90.8"	""	"816"	"47"	"36.000"	"29.000"	"0.000732251319747671"	""	"0"	"2.273E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVENAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"515.63947"	"1544.90384"	"1544.90483"	"-0.64"	"-0.00033"	"9/98"	"9"	"98"	"2400248.72717285"	"HCD"	"MS2"	"23.10323"	"74.4"	"100.000"	"68.9255"	"23035"	"23035"	"23016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.0"	""	"87.6"	""	"104.3"	""	"116.6"	""	"143.1"	"144.8"	""	"820"	"33"	"36.000"	"29.000"	"0.0211730711401549"	"28"	"0"	"0.0001006"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVENAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"772.95581"	"1544.90434"	"1544.90483"	"-0.31"	"-0.00024"	"18/98"	"18"	"98"	"592302.786987305"	"HCD"	"MS2"	"15.61149"	"55.4"	"100.000"	"68.7019"	"22944"	"22944"	"22922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.7"	""	"76.3"	""	"65.8"	""	"94.4"	"0.4"	"103.0"	"93.4"	""	"787"	"72"	"35.000"	"28.000"	"2.76022659928258E-06"	""	"0"	"6.113E-07"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVENAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"772.95587"	"1544.90447"	"1544.90483"	"-0.23"	"-0.00018"	"9/98"	"9"	"98"	"530984.884216309"	"HCD"	"MS2"	"13.56886"	"46.4"	"100.000"	"68.5969"	"22869"	"22869"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.9"	""	"56.1"	""	"66.8"	""	"70.3"	""	"85.7"	"80.0"	""	"788"	"70"	"35.000"	"28.000"	"3.94908263802693E-06"	""	"0"	"6.626E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVENAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"515.63977"	"1544.90476"	"1544.90483"	"-0.05"	"-0.00002"	"13/98"	"13"	"98"	"1854443.78179932"	"HCD"	"MS2"	"30.73111"	"57.1"	"100.000"	"68.5900"	"22866"	"22866"	"22844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.5"	""	"71.3"	""	"72.1"	""	"89.8"	"0.5"	"103.8"	"102.1"	""	"788"	"46"	"35.000"	"28.000"	"0.000904682567356271"	""	"0"	"2.704E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVENAk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7612"	"0.0000"	"1"	"1"	"1"	"772.95679"	"1544.90630"	"1544.90483"	"0.95"	"0.00073"	"9/98"	"9"	"98"	"439249.715881348"	"HCD"	"MS2"	"8.580148"	"39.0"	"100.000"	"68.9057"	"22993"	"22993"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"50.9"	""	"47.9"	""	"60.0"	"0.7"	"71.0"	"78.3"	""	"783"	"67"	"35.000"	"28.000"	"7.84750798713459E-06"	""	"0"	"5.301E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVPLVDVTK"	"[K].sEVPLVDVTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9821"	"0.0000"	"1"	"1"	"1"	"772.96838"	"1544.92949"	"1544.92998"	"-0.32"	"-0.00024"	"15/88"	"15"	"88"	"633218.123291016"	"HCD"	"MS2"	"9.58422"	"44.8"	"100.000"	"93.2796"	"32841"	"32841"	"32829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.6"	""	"52.3"	""	"51.1"	""	"70.2"	"0.0"	"104.3"	"101.5"	""	"621"	"56"	"34.000"	"27.000"	"8.51258780383608E-05"	"17"	"0"	"8.302E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVPLVDVTK"	"[K].sEVPLVDVTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.96851"	"1544.92974"	"1544.92998"	"-0.16"	"-0.00012"	"11/88"	"11"	"88"	"357570.38671875"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"92.9131"	"32730"	"32730"	"32707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"37.5"	""	"30.1"	""	"48.2"	""	"60.1"	"53.5"	""	"624"	"47"	"34.000"	"27.000"	"0.000690485549396959"	"15"	"0.0001991"	"0.004462"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVPLVDVTK"	"[K].sEVPLVDVTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.64813"	"1544.92984"	"1544.92998"	"-0.09"	"-0.00005"	"11/88"	"11"	"88"	"915794.243530273"	"HCD"	"MS2"	"31.26007"	"24.8"	"100.000"	"93.1014"	"32806"	"32806"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"25.6"	""	"29.9"	""	"48.7"	""	"45.7"	"54.9"	""	"621"	"25"	"34.000"	"27.000"	"0.0889327259655993"	"14"	"9.9E-05"	"0.0004997"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVPLVDVTK"	"[K].sEVPLVDVTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"772.96863"	"1544.92998"	"1544.92998"	"0.00"	"0.00000"	"15/88"	"15"	"88"	"548043.942932129"	"HCD"	"MS2"	"19.58942"	"37.0"	"100.000"	"93.2109"	"32850"	"32850"	"32832"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"38.4"	""	"42.9"	""	"64.6"	""	"83.7"	"89.0"	""	"619"	"55"	"34.000"	"27.000"	"8.74300352236411E-05"	"16"	"0"	"1.232E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVPLVDVTK"	"[K].sEVPLVDVTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"515.64825"	"1544.93021"	"1544.92998"	"0.15"	"0.00008"	"8/88"	"8"	"88"	"558946.701782227"	"HCD"	"MS2"	"37.78345"	"15.8"	"100.000"	"93.3281"	"32861"	"32861"	"32839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.1"	""	"22.9"	""	"17.0"	""	"26.9"	""	"33.7"	"31.0"	""	"618"	"20"	"34.000"	"27.000"	"0.28441891767173"	"14"	"0.0003938"	"0.006365"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEVPLVDVTK"	"[K].sEVPLVDVTk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"Q05096"	"Unconventional myosin-Ib OS=Rattus norvegicus OX=10116 GN=Myo1b PE=1 SV=1"	"0"	"2"	"2"	"0.9508"	"0.0000"	"1"	"1"	"1"	"772.96887"	"1544.93047"	"1544.92998"	"0.32"	"0.00024"	"14/88"	"14"	"88"	"257084.932495117"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"92.9705"	"32717"	"32717"	"32696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.7"	""	"23.0"	""	"25.3"	""	"36.5"	""	"37.9"	"39.9"	""	"624"	"61"	"34.000"	"27.000"	"2.47830409233976E-05"	"19"	"0"	"5.468E-06"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNPDVNVFQR"	"[R].dLNPDVNVFQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"773.41345"	"1545.81963"	"1545.82227"	"-1.71"	"-0.00132"	"5/104"	"5"	"104"	"215580.969787598"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"94.8803"	"33524"	"33524"	"33507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.6"	""	"15.5"	""	"17.5"	""	"26.8"	""	"27.5"	"27.7"	""	"965"	"17"	"36.000"	"29.000"	"0.867955216549641"	"21"	"0.002628"	"0.02742"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNPDVNVFQR"	"[R].dLNPDVNVFQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"3"	"3"	"0.3684"	"0.0000"	"1"	"1"	"1"	"515.94495"	"1545.82029"	"1545.82227"	"-1.28"	"-0.00066"	"10/104"	"10"	"104"	"373588.882751465"	"HCD"	"MS2"	"12.12828"	"10.6"	"100.000"	"94.7602"	"33476"	"33476"	"33463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"13.4"	""	"15.1"	""	"20.7"	""	"16.4"	"19.9"	""	"966"	"19"	"36.000"	"29.000"	"0.617941169908084"	"25"	"0.0001991"	"0.005537"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41412"	"1545.82097"	"1545.82227"	"-0.84"	"-0.00065"	"8/108"	"8"	"108"	"810065.945861816"	"HCD"	"MS2"	"5.575313"	"45.8"	"100.000"	"92.1580"	"32428"	"32428"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"60.9"	""	"64.1"	""	"62.8"	"1.8"	"96.7"	"87.3"	""	"970"	"54"	"36.000"	"29.000"	"0.000192637901492678"	""	"0"	"8.709E-07"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41412"	"1545.82097"	"1545.82227"	"-0.84"	"-0.00065"	"8/108"	"8"	"108"	"810065.945861816"	"HCD"	"MS2"	"5.575313"	"45.8"	"100.000"	"92.1580"	"32428"	"32428"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"60.9"	""	"64.1"	""	"62.8"	"1.8"	"96.7"	"87.3"	""	"970"	"54"	"36.000"	"29.000"	"0.000192637901492678"	""	"0"	"8.709E-07"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41412"	"1545.82097"	"1545.82227"	"-0.84"	"-0.00065"	"8/108"	"8"	"108"	"810065.945861816"	"HCD"	"MS2"	"5.575313"	"45.8"	"100.000"	"92.1580"	"32428"	"32428"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.8"	""	"60.9"	""	"64.1"	""	"62.8"	"1.8"	"96.7"	"87.3"	""	"970"	"54"	"36.000"	"29.000"	"0.000192637901492678"	""	"0"	"8.709E-07"	"1.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNPDVNVFQR"	"[R].dLNPDVNVFQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"3"	"3"	"0.6857"	"0.0000"	"1"	"1"	"1"	"515.94525"	"1545.82120"	"1545.82227"	"-0.69"	"-0.00036"	"10/104"	"10"	"104"	"534270.485778809"	"HCD"	"MS2"	"32.00164"	"11.8"	"100.000"	"94.7907"	"33455"	"33455"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"12.7"	""	"16.2"	""	"19.7"	""	"27.3"	"22.8"	""	"967"	"35"	"36.000"	"29.000"	"0.0162329136486469"	"26"	"9.9E-05"	"0.0008557"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"515.94537"	"1545.82157"	"1545.82227"	"-0.46"	"-0.00023"	"9/108"	"9"	"108"	"578744.456726074"	"HCD"	"MS2"	"31.64047"	"12.5"	"100.000"	"92.1972"	"32444"	"32444"	"32425"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"12.6"	""	"19.2"	""	"20.2"	""	"29.6"	"23.7"	""	"978"	"17"	"36.000"	"29.000"	"0.889833719860281"	"25"	"0.001488"	"0.0121"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"515.94537"	"1545.82157"	"1545.82227"	"-0.46"	"-0.00023"	"9/108"	"9"	"108"	"578744.456726074"	"HCD"	"MS2"	"31.64047"	"12.5"	"100.000"	"92.1972"	"32444"	"32444"	"32425"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"12.6"	""	"19.2"	""	"20.2"	""	"29.6"	"23.7"	""	"978"	"17"	"36.000"	"29.000"	"0.889833719860281"	"25"	"0.001488"	"0.0121"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"3"	"3"	"515.94537"	"1545.82157"	"1545.82227"	"-0.46"	"-0.00023"	"9/108"	"9"	"108"	"578744.456726074"	"HCD"	"MS2"	"31.64047"	"12.5"	"100.000"	"92.1972"	"32444"	"32444"	"32425"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"12.6"	""	"19.2"	""	"20.2"	""	"29.6"	"23.7"	""	"978"	"17"	"36.000"	"29.000"	"0.889833719860281"	"25"	"0.001488"	"0.0121"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41449"	"1545.82170"	"1545.82227"	"-0.37"	"-0.00028"	"8/108"	"8"	"108"	"773657.586975098"	"HCD"	"MS2"	"5.731143"	"43.2"	"100.000"	"92.2398"	"32426"	"32426"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"56.5"	""	"60.4"	""	"64.3"	"0.6"	"91.3"	"75.7"	""	"968"	"53"	"36.000"	"29.000"	"0.000248224909851821"	""	"0"	"4.539E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41449"	"1545.82170"	"1545.82227"	"-0.37"	"-0.00028"	"8/108"	"8"	"108"	"773657.586975098"	"HCD"	"MS2"	"5.731143"	"43.2"	"100.000"	"92.2398"	"32426"	"32426"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"56.5"	""	"60.4"	""	"64.3"	"0.6"	"91.3"	"75.7"	""	"968"	"53"	"36.000"	"29.000"	"0.000248224909851821"	""	"0"	"4.539E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41449"	"1545.82170"	"1545.82227"	"-0.37"	"-0.00028"	"8/108"	"8"	"108"	"773657.586975098"	"HCD"	"MS2"	"5.731143"	"43.2"	"100.000"	"92.2398"	"32426"	"32426"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"56.5"	""	"60.4"	""	"64.3"	"0.6"	"91.3"	"75.7"	""	"968"	"53"	"36.000"	"29.000"	"0.000248224909851821"	""	"0"	"4.539E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"515.94543"	"1545.82175"	"1545.82227"	"-0.34"	"-0.00017"	"10/108"	"10"	"108"	"1265371.27880859"	"HCD"	"MS2"	"15.80212"	"14.3"	"100.000"	"91.9792"	"32320"	"32320"	"32302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.6"	""	"20.0"	""	"16.0"	""	"21.5"	"1.3"	"30.7"	"25.0"	""	"968"	"35"	"36.000"	"29.000"	"0.0154826523309064"	""	"0"	"0.000157"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"515.94543"	"1545.82175"	"1545.82227"	"-0.34"	"-0.00017"	"10/108"	"10"	"108"	"1265371.27880859"	"HCD"	"MS2"	"15.80212"	"14.3"	"100.000"	"91.9792"	"32320"	"32320"	"32302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.6"	""	"20.0"	""	"16.0"	""	"21.5"	"1.3"	"30.7"	"25.0"	""	"968"	"35"	"36.000"	"29.000"	"0.0154826523309064"	""	"0"	"0.000157"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"3"	"3"	"515.94543"	"1545.82175"	"1545.82227"	"-0.34"	"-0.00017"	"10/108"	"10"	"108"	"1265371.27880859"	"HCD"	"MS2"	"15.80212"	"14.3"	"100.000"	"91.9792"	"32320"	"32320"	"32302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.6"	""	"20.0"	""	"16.0"	""	"21.5"	"1.3"	"30.7"	"25.0"	""	"968"	"35"	"36.000"	"29.000"	"0.0154826523309064"	""	"0"	"0.000157"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNPDVNVFQR"	"[R].dLNPDVNVFQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"773.41461"	"1545.82195"	"1545.82227"	"-0.21"	"-0.00016"	"7/104"	"7"	"104"	"299899.335998535"	"HCD"	"MS2"	"11.11082"	"17.1"	"100.000"	"94.6780"	"33409"	"33409"	"33393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"20.1"	""	"23.0"	""	"32.3"	""	"29.9"	"37.3"	""	"968"	"35"	"36.000"	"29.000"	"0.0163623380723695"	"23"	"0.0001991"	"0.00229"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"515.94550"	"1545.82193"	"1545.82227"	"-0.22"	"-0.00011"	"13/108"	"13"	"108"	"1262380.16662598"	"HCD"	"MS2"	"10.4566"	"15.2"	"100.000"	"91.8908"	"32320"	"32320"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.1"	""	"20.4"	""	"18.9"	""	"23.5"	""	"27.6"	"26.0"	""	"968"	"33"	"36.000"	"29.000"	"0.0256357106843563"	"25"	"0"	"0.0002551"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"515.94550"	"1545.82193"	"1545.82227"	"-0.22"	"-0.00011"	"13/108"	"13"	"108"	"1262380.16662598"	"HCD"	"MS2"	"10.4566"	"15.2"	"100.000"	"91.8908"	"32320"	"32320"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.1"	""	"20.4"	""	"18.9"	""	"23.5"	""	"27.6"	"26.0"	""	"968"	"33"	"36.000"	"29.000"	"0.0256357106843563"	"25"	"0"	"0.0002551"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"1"	"3"	"3"	"515.94550"	"1545.82193"	"1545.82227"	"-0.22"	"-0.00011"	"13/108"	"13"	"108"	"1262380.16662598"	"HCD"	"MS2"	"10.4566"	"15.2"	"100.000"	"91.8908"	"32320"	"32320"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.1"	""	"20.4"	""	"18.9"	""	"23.5"	""	"27.6"	"26.0"	""	"968"	"33"	"36.000"	"29.000"	"0.0256357106843563"	"25"	"0"	"0.0002551"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNPDVNVFQR"	"[R].dLNPDVNVFQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"P25286"	"V-type proton ATPase 116 kDa subunit a isoform 1 OS=Rattus norvegicus OX=10116 GN=Atp6v0a1 PE=2 SV=1"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"3"	"773.41467"	"1545.82207"	"1545.82227"	"-0.13"	"-0.00010"	"9/104"	"9"	"104"	"161530.408630371"	"HCD"	"MS2"	"21.67537"	"12.2"	"100.000"	"94.5621"	"33397"	"33397"	"33381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.4"	""	"12.0"	"1.7"	"14.7"	""	"22.6"	""	"28.8"	"23.3"	""	"971"	"9"	"36.000"	"29.000"	"6.47424655315294"	"20"	"0.00856"	"0.1094"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41467"	"1545.82207"	"1545.82227"	"-0.13"	"-0.00010"	"5/108"	"5"	"108"	"189056.543762207"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"94.9890"	"33535"	"33535"	"33516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"17.1"	""	"19.2"	""	"20.7"	""	"27.6"	"24.1"	""	"971"	"25"	"36.000"	"29.000"	"0.15566437570474"	"28"	"0.003704"	"0.04013"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41467"	"1545.82207"	"1545.82227"	"-0.13"	"-0.00010"	"5/108"	"5"	"108"	"189056.543762207"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"94.9890"	"33535"	"33535"	"33516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"17.1"	""	"19.2"	""	"20.7"	""	"27.6"	"24.1"	""	"971"	"25"	"36.000"	"29.000"	"0.15566437570474"	"28"	"0.003704"	"0.04013"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41467"	"1545.82207"	"1545.82227"	"-0.13"	"-0.00010"	"5/108"	"5"	"108"	"189056.543762207"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"94.9890"	"33535"	"33535"	"33516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"17.1"	""	"19.2"	""	"20.7"	""	"27.6"	"24.1"	""	"971"	"25"	"36.000"	"29.000"	"0.15566437570474"	"28"	"0.003704"	"0.04013"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41492"	"1545.82256"	"1545.82227"	"0.18"	"0.00014"	"8/108"	"8"	"108"	"1734606.80297852"	"HCD"	"MS2"	"0"	"83.5"	"100.000"	"91.9400"	"32304"	"32304"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.1"	""	"112.9"	""	"115.4"	""	"122.3"	""	"143.5"	"150.9"	""	"966"	"52"	"36.000"	"29.000"	"0.000272864558834342"	""	"0"	"8.614E-07"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41492"	"1545.82256"	"1545.82227"	"0.18"	"0.00014"	"8/108"	"8"	"108"	"1734606.80297852"	"HCD"	"MS2"	"0"	"83.5"	"100.000"	"91.9400"	"32304"	"32304"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.1"	""	"112.9"	""	"115.4"	""	"122.3"	""	"143.5"	"150.9"	""	"966"	"52"	"36.000"	"29.000"	"0.000272864558834342"	""	"0"	"8.614E-07"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41492"	"1545.82256"	"1545.82227"	"0.18"	"0.00014"	"8/108"	"8"	"108"	"1734606.80297852"	"HCD"	"MS2"	"0"	"83.5"	"100.000"	"91.9400"	"32304"	"32304"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.1"	""	"112.9"	""	"115.4"	""	"122.3"	""	"143.5"	"150.9"	""	"966"	"52"	"36.000"	"29.000"	"0.000272864558834342"	""	"0"	"8.614E-07"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIWDTAGQER"	"[KR].iQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"1"	""	""	"P35289"	"Ras-related protein Rab-15 OS=Rattus norvegicus OX=10116 GN=Rab15 PE=2 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"773.41510"	"1545.82292"	"1545.82227"	"0.42"	"0.00033"	"8/108"	"8"	"108"	"1702064.13684082"	"HCD"	"MS2"	"0"	"75.0"	"100.000"	"91.8723"	"32312"	"32312"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.1"	""	"112.9"	""	"101.8"	""	"113.2"	""	"133.7"	"128.3"	""	"967"	"50"	"36.000"	"29.000"	"0.000442992606973987"	""	"0"	"2.196E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQIWDTAGQER"	"[KR].lQIWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"9"	"16"	"P61107; Q6NYB7; P35281; P51146; P35284; P35280; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3;Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3;Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1;Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1;Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2;Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2;Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1;Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P61107; Q6NYB7; P63012; Q63942; Q53B90; P05714; P35281; P51146; P70550; Q63941; P35284; P35280; P51156; P62824; Q5U316; P10536"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3; Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3; Ras-related protein Rab-3A OS=Rattus norvegicus OX=10116 GN=Rab3a PE=1 SV=1; GTP-binding protein Rab-3D OS=Rattus norvegicus OX=10116 GN=Rab3d PE=1 SV=2; Ras-related protein Rab-43 OS=Rattus norvegicus OX=10116 GN=Rab43 PE=2 SV=1; Ras-related protein Rab-4A OS=Rattus norvegicus OX=10116 GN=Rab4a PE=1 SV=3; Ras-related protein Rab-10 OS=Rattus norvegicus OX=10116 GN=Rab10 PE=1 SV=1; Ras-related protein Rab-4B OS=Rattus norvegicus OX=10116 GN=Rab4b PE=2 SV=1; Ras-related protein Rab-8B OS=Rattus norvegicus OX=10116 GN=Rab8b PE=1 SV=1; Ras-related protein Rab-3B OS=Rattus norvegicus OX=10116 GN=Rab3b PE=1 SV=2; Ras-related protein Rab-12 OS=Rattus norvegicus OX=10116 GN=Rab12 PE=1 SV=2; Ras-related protein Rab-8A OS=Rattus norvegicus OX=10116 GN=Rab8a PE=1 SV=2; Ras-related protein Rab-26 OS=Rattus norvegicus OX=10116 GN=Rab26 PE=2 SV=2; Ras-related protein Rab-3C OS=Rattus norvegicus OX=10116 GN=Rab3c PE=1 SV=1; Ras-related protein Rab-35 OS=Rattus norvegicus OX=10116 GN=Rab35 PE=1 SV=1; Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"773.41510"	"1545.82292"	"1545.82227"	"0.42"	"0.00033"	"8/108"	"8"	"108"	"1702064.13684082"	"HCD"	"MS2"	"0"	"75.0"	"100.000"	"91.8723"	"32312"	"32312"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.1"	""	"112.9"	""	"101.8"	""	"113.2"	""	"133.7"	"128.3"	""	"967"	"50"	"36.000"	"29.000"	"0.000442992606973987"	""	"0"	"2.196E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQLWDTAGQER"	"[KR].lQLWDTAGQER.[FY]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"3"	"3"	"773.41510"	"1545.82292"	"1545.82227"	"0.42"	"0.00033"	"8/108"	"8"	"108"	"1702064.13684082"	"HCD"	"MS2"	"0"	"75.0"	"100.000"	"91.8723"	"32312"	"32312"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.1"	""	"112.9"	""	"101.8"	""	"113.2"	""	"133.7"	"128.3"	""	"967"	"50"	"36.000"	"29.000"	"0.000442992606973987"	""	"0"	"2.196E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLSPANDTGAK"	"[R].gGLSPANDTGAk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8378"	"0.0000"	"1"	"1"	"1"	"773.43445"	"1545.86162"	"1545.86369"	"-1.34"	"-0.00104"	"12/108"	"12"	"108"	"217197.829467773"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"40.8178"	"11594"	"11594"	"11564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"23.7"	""	"25.8"	""	"38.6"	""	"21.7"	"20.8"	""	"1104"	"37"	"37.000"	"30.000"	"0.0107879537958802"	"21"	"9.9E-05"	"0.0006633"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGLSPANDTGAK"	"[R].gGLSPANDTGAk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"Q8K1Q0"	"Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Nmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"773.43500"	"1545.86272"	"1545.86369"	"-0.63"	"-0.00049"	"6/108"	"6"	"108"	"193921.342712402"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"40.7317"	"11594"	"11594"	"11563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.5"	""	"24.9"	""	"26.9"	""	"26.1"	""	"24.4"	"21.1"	""	"1092"	"28"	"37.000"	"30.000"	"0.0959826293221445"	"18"	"0.0001991"	"0.003047"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVNLAVENAK"	"[K].eVNLAVEnAk.[A]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.2927"	"0.0000"	"1"	"1"	"1"	"773.43500"	"1545.86272"	"1545.88884"	"-16.90"	"-0.01306"	"7/98"	"7"	"98"	"600973.350891113"	"HCD"	"MS2"	"61.77267"	"49.1"	"100.000"	"68.5692"	"22858"	"22858"	"22828"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.7"	""	"72.9"	""	"66.4"	""	"67.5"	""	"84.1"	"89.8"	""	"1092"	"41"	"37.000"	"30.000"	"0.00397367773277105"	"24"	"0.001348"	"0.01141"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEEVTILAQK"	"[K].gEEVTILAQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"773.46515"	"1545.92302"	"1545.92523"	"-1.43"	"-0.00110"	"7/80"	"7"	"80"	"244214.154174805"	"HCD"	"MS2"	"60.34504"	"22.1"	"100.000"	"83.4199"	"28906"	"28906"	"28878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.3"	""	"24.5"	""	"28.1"	""	"42.0"	""	"35.5"	"43.9"	""	"792"	"31"	"35.000"	"28.000"	"0.0343316902800254"	"26"	"0.0001991"	"0.002095"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEEVTILAQK"	"[K].gEEVTILAQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"773.46545"	"1545.92363"	"1545.92523"	"-1.03"	"-0.00080"	"7/80"	"7"	"80"	"262463.89666748"	"HCD"	"MS2"	"62.87905"	"22.2"	"100.000"	"83.4484"	"28889"	"28889"	"28864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"30.0"	""	"27.2"	""	"42.4"	""	"30.6"	"46.8"	""	"792"	"25"	"35.000"	"28.000"	"0.113160585517648"	"25"	"9.9E-05"	"0.0004072"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.0864"	"0.0000"	"1"	"1"	"1"	"773.46576"	"1545.92424"	"1545.90494"	"12.49"	"0.00965"	"9/124"	"9"	"124"	"3390796.40374756"	"HCD"	"MS2"	"0"	"237.0"	"100.000"	"99.3048"	"35282"	"35282"	"35270"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"307.5"	""	"282.0"	""	"312.5"	""	"402.3"	"0.5"	"436.2"	"507.3"	""	"798"	"81"	"36.000"	"29.000"	"3.22829263772174E-07"	""	"0"	"0.0002913"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.0877"	"0.0000"	"1"	"1"	"1"	"515.97961"	"1545.92429"	"1545.90494"	"12.52"	"0.00645"	"7/124"	"7"	"124"	"3407399.81097412"	"HCD"	"MS2"	"8.991533"	"80.5"	"100.000"	"99.1071"	"35231"	"35231"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.2"	""	"96.9"	""	"95.0"	""	"144.1"	"2.5"	"148.3"	"161.5"	""	"797"	"57"	"36.000"	"29.000"	"7.3523864454302E-05"	""	"0"	"0.0002112"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.0556"	"0.0000"	"1"	"1"	"1"	"515.97974"	"1545.92466"	"1545.90494"	"12.75"	"0.00657"	"8/124"	"8"	"124"	"3774196.0993042"	"HCD"	"MS2"	"10.48721"	"88.2"	"100.000"	"99.0626"	"35184"	"35184"	"35170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.4"	""	"107.7"	""	"117.2"	""	"159.3"	""	"160.6"	"172.5"	""	"782"	"72"	"35.000"	"28.000"	"2.51870182816435E-06"	""	"0.0001686"	"0.001371"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.0897"	"0.0000"	"1"	"1"	"1"	"773.46606"	"1545.92485"	"1545.90494"	"12.88"	"0.00996"	"9/124"	"9"	"124"	"1886658.40710449"	"HCD"	"MS2"	"1.47217"	"136.0"	"100.000"	"99.1004"	"35229"	"35229"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"197.5"	""	"172.1"	""	"168.3"	""	"234.8"	"0.9"	"247.2"	"268.7"	""	"784"	"78"	"35.000"	"28.000"	"6.41632076399701E-07"	""	"0"	"0.0002553"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.1053"	"0.0000"	"1"	"1"	"1"	"515.97986"	"1545.92502"	"1545.90494"	"12.99"	"0.00669"	"8/124"	"8"	"124"	"4537907.82202148"	"HCD"	"MS2"	"4.521409"	"101.9"	"100.000"	"99.3371"	"35295"	"35295"	"35281"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.6"	""	"116.7"	""	"125.6"	""	"168.5"	"0.6"	"193.2"	"221.1"	""	"784"	"76"	"35.000"	"28.000"	"1.05751385751841E-06"	""	"0"	"0.0002062"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.0877"	"0.0000"	"1"	"1"	"1"	"515.98004"	"1545.92557"	"1545.90494"	"13.35"	"0.00688"	"7/124"	"7"	"124"	"4084621.91534424"	"HCD"	"MS2"	"5.551001"	"91.5"	"100.000"	"99.3910"	"35345"	"35345"	"35330"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.0"	""	"99.2"	""	"118.6"	""	"153.6"	""	"183.4"	"194.8"	""	"784"	"57"	"35.000"	"28.000"	"7.24913298639406E-05"	""	"0.0001991"	"0.002141"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.0864"	"0.0000"	"1"	"1"	"1"	"773.46649"	"1545.92571"	"1545.90494"	"13.43"	"0.01038"	"9/124"	"9"	"124"	"2617744.77172852"	"HCD"	"MS2"	"0"	"184.0"	"100.000"	"99.3866"	"35344"	"35344"	"35330"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"249.5"	""	"225.5"	""	"233.3"	""	"299.4"	""	"348.6"	"389.9"	""	"794"	"81"	"35.000"	"28.000"	"3.30210217127761E-07"	""	"0"	"0.0003177"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DALNIETAIKTK"	"[R].dALNIETAIKTK.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"2"	"2"	"0.0429"	"0.0000"	"1"	"1"	"1"	"773.46667"	"1545.92607"	"1545.90494"	"13.67"	"0.01057"	"9/124"	"9"	"124"	"1633728.45953369"	"HCD"	"MS2"	"0"	"119.6"	"100.000"	"99.0347"	"35172"	"35172"	"35160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.3"	""	"159.0"	""	"150.3"	""	"224.4"	"0.8"	"203.9"	"229.1"	""	"779"	"70"	"35.000"	"28.000"	"3.90397890231342E-06"	""	"0.0001686"	"0.001098"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DALNIETAIK"	"[R].dALNIETAIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	""	"0.0429"	"2"	"2"	"2"	"773.46667"	"1545.92607"	"1545.92523"	"0.55"	"0.00042"	"9/96"	"9"	"96"	"1633728.45953369"	"HCD"	"MS2"	"0"	"119.6"	"100.000"	"99.0347"	"35172"	"35172"	"35160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.3"	""	"159.0"	""	"150.3"	""	"224.4"	"0.8"	"203.9"	"229.1"	""	"779"	"67"	"35.000"	"28.000"	"7.55975049322386E-06"	""	"0"	"1.052E-05"	"0.855"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLEDEK"	"[R].kPLEDEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"515.98566"	"1545.94242"	"1545.94552"	"-2.01"	"-0.00103"	"5/64"	"5"	"64"	"12181723.3406982"	"HCD"	"MS2"	"35.32212"	"651.9"	"100.000"	"39.1893"	"10936"	"10936"	"10919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1016.6"	""	"776.0"	""	"849.1"	""	"1021.5"	"1.1"	"1162.2"	"1351.1"	""	"692"	"24"	"35.000"	"28.000"	"0.153842418544312"	"18"	"0.001217"	"0.00941"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLEDEK"	"[R].kPLEDEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"515.98590"	"1545.94315"	"1545.94552"	"-1.53"	"-0.00079"	"5/64"	"5"	"64"	"13049578.9869385"	"HCD"	"MS2"	"7.834591"	"696.8"	"100.000"	"39.3975"	"11055"	"11055"	"11039"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1101.1"	""	"794.4"	""	"902.5"	""	"1081.6"	"0.4"	"1238.1"	"1486.1"	""	"692"	"24"	"35.000"	"28.000"	"0.140953576120223"	"18"	"0.001348"	"0.0111"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLEDEK"	"[R].kPLEDEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"515.98596"	"1545.94333"	"1545.94552"	"-1.41"	"-0.00073"	"5/64"	"5"	"64"	"11931374.6130371"	"HCD"	"MS2"	"26.41609"	"632.2"	"100.000"	"39.1202"	"10943"	"10943"	"10931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"968.0"	""	"744.0"	""	"845.1"	""	"994.0"	"0.2"	"1180.4"	"1260.0"	""	"694"	"24"	"35.000"	"28.000"	"0.154642718193934"	"18"	"0.0009352"	"0.007996"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPLEDEK"	"[R].kPLEDEk.[C]"	"N-Term(TMT6plex); K1(TMT6plex); K7(TMT6plex)"	"1"	"1"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"P04904"	"Glutathione S-transferase alpha-3 OS=Rattus norvegicus OX=10116 GN=Gsta3 PE=1 SV=3"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"515.98608"	"1545.94370"	"1545.94552"	"-1.18"	"-0.00061"	"5/64"	"5"	"64"	"12472069.7004395"	"HCD"	"MS2"	"14.11015"	"576.2"	"90.221"	"39.5159"	"11066"	"11066"	"11054"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"887.1"	""	"680.2"	""	"781.4"	""	"885.6"	"0.3"	"1039.2"	"1186.5"	""	"694"	"22"	"35.000"	"28.000"	"0.224042017475026"	"17"	"0.001348"	"0.01094"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHHTFSTEIAK"	"[K].FHHTFSTEIAk.[F]"	"K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"387.46021"	"1546.81899"	"1546.82154"	"-1.65"	"-0.00064"	"5/88"	"5"	"88"	"2215490.4286499"	"HCD"	"MS2"	"30.11532"	"112.2"	"100.000"	"37.0559"	"10067"	"10067"	"10036"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.7"	""	"164.7"	""	"139.7"	""	"179.2"	"3.5"	"182.6"	"248.0"	""	"982"	"13"	"36.000"	"29.000"	"2.5473081911412"	"13"	"0.002588"	"0.02678"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHHTFSTEIAK"	"[K].FHHTFSTEIAk.[F]"	"K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"4"	"4"	"0.8235"	"0.0000"	"1"	"1"	"1"	"387.46063"	"1546.82070"	"1546.82154"	"-0.55"	"-0.00021"	"8/88"	"8"	"88"	"2110236.5881958"	"HCD"	"MS2"	"18.7914"	"115.3"	"100.000"	"37.0105"	"10086"	"10086"	"10058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.0"	""	"167.4"	""	"137.3"	""	"178.8"	"4.2"	"187.6"	"267.7"	""	"978"	"17"	"36.000"	"29.000"	"0.962296395666647"	"17"	"0.006267"	"0.07663"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPYVAEDELR"	"[R].lLPYVAEDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"773.93701"	"1546.86675"	"1546.86782"	"-0.70"	"-0.00054"	"6/84"	"6"	"84"	"208969.340576172"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"110.9910"	"39923"	"39923"	"39900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"12.9"	""	"12.0"	""	"16.5"	""	"23.6"	"28.1"	""	"1109"	"22"	"37.000"	"30.000"	"0.390752306742283"	"19"	"0.002189"	"0.02049"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLPYVAEDELR"	"[R].lLPYVAEDELR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"Q9JJM7"	"Platelet glycoprotein Ib beta chain OS=Rattus norvegicus OX=10116 GN=Gp1bb PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"773.93781"	"1546.86833"	"1546.86782"	"0.33"	"0.00025"	"11/84"	"11"	"84"	"335656.924621582"	"HCD"	"MS2"	"8.856699"	"15.3"	"100.000"	"110.8591"	"39856"	"39856"	"39831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"17.1"	""	"16.5"	""	"23.4"	""	"32.9"	"37.5"	""	"1102"	"27"	"37.000"	"30.000"	"0.116453246094999"	"20"	"0.001348"	"0.01054"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"773.93915"	"1546.87102"	"1546.87286"	"-1.19"	"-0.00092"	"5/86"	"5"	"86"	"146550.532531738"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"69.4274"	"23240"	"23240"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"19.1"	""	"18.7"	""	"12.6"	"1.1"	"23.6"	"28.8"	""	"1109"	"21"	"37.000"	"30.000"	"0.459093929778489"	"29"	"0.004792"	"0.05682"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4909"	"0.0000"	"1"	"1"	"1"	"773.93994"	"1546.87261"	"1546.87286"	"-0.16"	"-0.00013"	"8/86"	"8"	"86"	"492198.098815918"	"HCD"	"MS2"	"12.06221"	"44.8"	"100.000"	"69.0139"	"23037"	"23037"	"23016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"44.9"	""	"68.3"	""	"59.1"	"2.2"	"85.3"	"91.7"	""	"1106"	"55"	"37.000"	"30.000"	"0.000179773275454145"	""	"0"	"7.465E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"773.94006"	"1546.87285"	"1546.87286"	"-0.01"	"0.00000"	"8/86"	"8"	"86"	"471390.276062012"	"HCD"	"MS2"	"23.34612"	"43.5"	"100.000"	"69.0728"	"23095"	"23095"	"23077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"53.0"	""	"52.0"	""	"65.9"	"0.6"	"75.0"	"91.0"	""	"1104"	"57"	"37.000"	"30.000"	"0.000101844851138707"	""	"0"	"2.763E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQELEK"	"[R].eLAEQELEk.[Q]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6471"	"0.0000"	"1"	"1"	"1"	"773.94104"	"1546.87480"	"1546.87286"	"1.26"	"0.00097"	"7/86"	"7"	"86"	"140916.08782959"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"69.3683"	"23182"	"23182"	"23155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"14.2"	""	"13.6"	""	"16.4"	""	"17.7"	"25.4"	""	"1095"	"17"	"37.000"	"30.000"	"1.08239087796124"	"20"	"0.0005161"	"0.006855"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDFNDTFYR"	"[K].iQDFNDTFYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.38794"	"1547.76860"	"1547.76917"	"-0.37"	"-0.00029"	"15/96"	"15"	"96"	"867754.94909668"	"HCD"	"MS2"	"80.04601"	"70.2"	"100.000"	"99.4650"	"35375"	"35375"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.5"	""	"88.5"	""	"90.9"	""	"122.8"	""	"138.3"	"144.4"	""	"659"	"7"	"35.000"	"28.000"	"5.92727966534936"	"13"	"0.001348"	"0.0108"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQDFNDTFYR"	"[K].iQDFNDTFYR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"Q99MI7"	"NEDD8-activating enzyme E1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Uba3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"774.38898"	"1547.77068"	"1547.76917"	"0.97"	"0.00075"	"8/96"	"8"	"96"	"558481.228637695"	"HCD"	"MS2"	"43.45113"	"41.3"	"100.000"	"99.4892"	"35356"	"35356"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"55.2"	""	"57.0"	""	"63.1"	""	"84.7"	"81.7"	""	"680"	"22"	"35.000"	"28.000"	"0.202059333929295"	"14"	"0"	"0.0001711"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDQWAWETLR"	"[K].nDQWAWETLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"774.39282"	"1547.77837"	"1547.78041"	"-1.32"	"-0.00102"	"4/102"	"4"	"102"	"130302.176086426"	"HCD"	"MS2"	"100"	"11.5"	"100.000"	"101.7380"	"36269"	"36269"	"36248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"14.0"	""	"18.4"	""	"19.4"	""	"20.2"	"20.9"	""	"730"	"15"	"35.000"	"28.000"	"1.10737028223091"	"19"	"0.0001991"	"0.005457"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDQWAWETLR"	"[K].nDQWAWETLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7931"	"0.0000"	"1"	"1"	"1"	"774.39386"	"1547.78044"	"1547.78041"	"0.02"	"0.00002"	"7/102"	"7"	"102"	"201699.765869141"	"HCD"	"MS2"	"34.07003"	"15.0"	"100.000"	"101.9433"	"36377"	"36377"	"36355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"19.6"	""	"22.7"	""	"21.3"	"1.7"	"29.9"	"30.6"	""	"776"	"29"	"35.000"	"28.000"	"0.0536823755041051"	"21"	"0"	"0.0001917"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVIEPMASEGLR"	"[K].tVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"774.41876"	"1547.83025"	"1547.83006"	"0.12"	"0.00009"	"8/104"	"8"	"104"	"340055.775085449"	"HCD"	"MS2"	"25.07249"	"20.1"	"100.000"	"58.1305"	"18620"	"18620"	"18594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"25.7"	""	"25.0"	""	"36.7"	"1.1"	"36.1"	"38.5"	""	"1061"	"15"	"37.000"	"30.000"	"1.57284305214267"	"21"	"0.001348"	"0.0106"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQGASPVAMQK"	"[R].gQGASPVAmQk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"774.43274"	"1547.85820"	"1547.86158"	"-2.18"	"-0.00169"	"14/98"	"14"	"98"	"293041.546081543"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"31.4996"	"7857"	"7857"	"7833"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"16.9"	""	"22.2"	""	"57.0"	""	"42.8"	"46.5"	""	"1119"	"27"	"37.000"	"30.000"	"0.106120696291764"	"15"	"9.9E-05"	"0.0009561"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQGASPVAMQK"	"[R].gQGASPVAmQk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"774.43286"	"1547.85845"	"1547.86158"	"-2.03"	"-0.00157"	"11/98"	"11"	"98"	"440802.345825195"	"HCD"	"MS2"	"0"	"29.3"	"100.000"	"31.4626"	"7842"	"7842"	"7822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"24.6"	""	"33.7"	""	"74.9"	"0.6"	"54.1"	"55.6"	""	"1115"	"34"	"37.000"	"30.000"	"0.0248453358481608"	"20"	"0.0001686"	"0.001122"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQGASPVAMQK"	"[R].gQGASPVAmQk.[A]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"774.43530"	"1547.86333"	"1547.86158"	"1.13"	"0.00087"	"9/98"	"9"	"98"	"624976.897521973"	"HCD"	"MS2"	"0"	"45.9"	"100.000"	"31.4121"	"7784"	"7784"	"7754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.6"	""	"47.0"	""	"52.1"	""	"108.5"	""	"89.1"	"86.6"	""	"1060"	"30"	"37.000"	"30.000"	"0.0575805580517045"	"19"	"9.9E-05"	"0.0006466"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLENPNALTER"	"[K].yLENPNALTER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.8409"	"0.0000"	"1"	"1"	"1"	"774.91370"	"1548.82012"	"1548.82194"	"-1.18"	"-0.00091"	"8/108"	"8"	"108"	"322358.630737305"	"HCD"	"MS2"	"34.80615"	"22.8"	"100.000"	"69.5956"	"23308"	"23308"	"23283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.4"	""	"30.0"	""	"38.8"	""	"29.9"	""	"43.1"	"39.8"	""	"955"	"44"	"36.000"	"29.000"	"0.00206525354319217"	"22"	"0"	"0.0001087"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLENPNALTER"	"[K].yLENPNALTER.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"D3ZD05"	"KN motif and ankyrin repeat domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Kank2 PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"774.91455"	"1548.82182"	"1548.82194"	"-0.07"	"-0.00006"	"6/108"	"6"	"108"	"306647.093933105"	"HCD"	"MS2"	"30.71402"	"23.1"	"100.000"	"69.4971"	"23234"	"23234"	"23212"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"28.6"	""	"33.9"	""	"38.7"	"0.8"	"39.8"	"42.2"	""	"966"	"28"	"36.000"	"29.000"	"0.0820251684139022"	"15"	"0.0001991"	"0.002881"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDMGNSLIER"	"[R].gVIDmGNSLIER.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"774.91553"	"1548.82378"	"1548.82531"	"-0.99"	"-0.00077"	"9/112"	"9"	"112"	"412628.737121582"	"HCD"	"MS2"	"24.23134"	"22.8"	"100.000"	"72.0666"	"24275"	"24275"	"24259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.8"	""	"23.2"	""	"23.8"	""	"47.5"	"0.9"	"37.5"	"52.3"	""	"976"	"46"	"36.000"	"29.000"	"0.00112828761760569"	""	"0.0001686"	"0.001439"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVIDMGNSLIER"	"[R].gVIDmGNSLIER.[G]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"774.91626"	"1548.82524"	"1548.82531"	"-0.04"	"-0.00003"	"13/112"	"13"	"112"	"331019.580383301"	"HCD"	"MS2"	"20.41297"	"18.4"	"100.000"	"72.0266"	"24289"	"24289"	"24266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.6"	""	"24.3"	""	"22.3"	""	"41.7"	""	"30.5"	"36.9"	""	"962"	"24"	"36.000"	"29.000"	"0.191489549036232"	"29"	"0.001261"	"0.01003"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"774.91663"	"1548.82598"	"1548.83437"	"-5.42"	"-0.00420"	"12/80"	"12"	"80"	"707977.294006348"	"HCD"	"MS2"	"11.82327"	"63.6"	"100.000"	"69.8175"	"23364"	"23364"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.1"	""	"101.7"	""	"79.8"	""	"82.1"	"0.8"	"99.5"	"122.1"	""	"966"	"28"	"36.000"	"29.000"	"0.0807136766712071"	""	"0.0001991"	"0.002036"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"774.91675"	"1548.82622"	"1548.83437"	"-5.26"	"-0.00407"	"8/80"	"8"	"80"	"653135.874389648"	"HCD"	"MS2"	"15.52673"	"59.8"	"100.000"	"69.9135"	"23437"	"23437"	"23420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.8"	""	"93.0"	""	"80.7"	""	"71.0"	""	"114.1"	"109.6"	""	"959"	"28"	"36.000"	"29.000"	"0.0724083433921709"	""	"0.0001991"	"0.002562"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7308"	"0.0000"	"1"	"1"	"1"	"774.92096"	"1548.83464"	"1548.83437"	"0.18"	"0.00014"	"9/80"	"9"	"80"	"1276378.02832031"	"HCD"	"MS2"	"3.882919"	"129.2"	"100.000"	"70.2295"	"23565"	"23565"	"23547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"224.5"	""	"190.5"	""	"171.6"	""	"122.8"	""	"263.4"	"254.0"	""	"1051"	"52"	"37.000"	"30.000"	"0.000361054465227479"	"30"	"0"	"8.109E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPTEADELMK"	"[R].gPTEADELMk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"774.92102"	"1548.83476"	"1548.83437"	"0.26"	"0.00020"	"8/80"	"8"	"80"	"1340812.73553467"	"HCD"	"MS2"	"5.415781"	"129.7"	"100.000"	"70.1102"	"23483"	"23483"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.9"	""	"182.2"	""	"183.8"	""	"123.5"	""	"258.1"	"257.0"	""	"1069"	"49"	"37.000"	"30.000"	"0.000685405696429644"	"30"	"0"	"0.0002519"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDDISESIK"	"[R].aLDDISESIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U1X1"	"Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=1"	"Q5U1X1"	"Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=1"	"0"	"2"	"2"	"0.8431"	"0.0000"	"1"	"1"	"1"	"774.94720"	"1548.88713"	"1548.88851"	"-0.89"	"-0.00069"	"8/82"	"8"	"82"	"284257.02166748"	"HCD"	"MS2"	"15.76256"	"30.3"	"100.000"	"97.0776"	"34381"	"34381"	"34361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.2"	""	"41.3"	""	"39.4"	""	"52.8"	"0.6"	"56.1"	"47.3"	""	"977"	"51"	"36.000"	"29.000"	"0.00037832458822653"	"23"	"0"	"4.653E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDDISESIK"	"[R].aLDDISESIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U1X1"	"Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=1"	"Q5U1X1"	"Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"774.94830"	"1548.88933"	"1548.88851"	"0.53"	"0.00041"	"9/82"	"9"	"82"	"317029.924316406"	"HCD"	"MS2"	"20.52084"	"29.3"	"100.000"	"97.2045"	"34463"	"34463"	"34445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"33.5"	""	"32.1"	""	"60.1"	"0.9"	"57.8"	"51.6"	""	"1013"	"63"	"37.000"	"30.000"	"2.29921428833328E-05"	"30"	"0"	"8.861E-07"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGSEVVVTNK"	"[K].tGGSEVVVTNk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.8444"	"0.0000"	"1"	"1"	"1"	"774.95361"	"1548.89995"	"1548.89974"	"0.13"	"0.00010"	"9/98"	"9"	"98"	"261012.891723633"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"44.4854"	"13118"	"13118"	"13100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"30.6"	""	"30.8"	""	"45.7"	""	"58.3"	"50.0"	""	"917"	"45"	"36.000"	"29.000"	"0.00135001731909673"	"22"	"0"	"1.871E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGGSEVVVTNK"	"[K].tGGSEVVVTNk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"Q62940"	"E3 ubiquitin-protein ligase NEDD4 OS=Rattus norvegicus OX=10116 GN=Nedd4 PE=1 SV=1"	"0"	"2"	"2"	"0.9057"	"0.0000"	"1"	"1"	"1"	"774.95428"	"1548.90129"	"1548.89974"	"1.00"	"0.00077"	"7/98"	"7"	"98"	"300507.082641602"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"44.6272"	"13141"	"13141"	"13121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"29.8"	""	"30.0"	""	"46.8"	"1.5"	"49.0"	"61.8"	""	"918"	"53"	"36.000"	"29.000"	"0.000214196655564258"	"21"	"0"	"2.454E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSQATIDSK"	"[R].eLSQATIDSk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"775.44379"	"1549.88030"	"1549.88376"	"-2.23"	"-0.00173"	"14/100"	"14"	"100"	"248358.199768066"	"HCD"	"MS2"	"23.53419"	"23.8"	"100.000"	"59.9602"	"19366"	"19366"	"19337"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.7"	""	"34.7"	""	"32.5"	""	"36.7"	""	"41.3"	"41.4"	""	"929"	"38"	"36.000"	"29.000"	"0.00714472830420759"	"24"	"0"	"0.000139"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSQATIDSK"	"[R].eLSQATIDSk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"P54319"	"Phospholipase A-2-activating protein OS=Rattus norvegicus OX=10116 GN=Plaa PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"775.44489"	"1549.88249"	"1549.88376"	"-0.82"	"-0.00063"	"12/100"	"12"	"100"	"224138.457580566"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"59.9141"	"19380"	"19380"	"19353"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"26.5"	""	"25.2"	""	"34.5"	"0.5"	"37.9"	"39.9"	""	"922"	"42"	"36.000"	"29.000"	"0.00296279037683146"	"21"	"9.9E-05"	"0.0007019"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"775.45227"	"1549.89726"	"1549.89902"	"-1.13"	"-0.00088"	"6/86"	"6"	"86"	"120580.773376465"	"HCD"	"MS2"	"21.1692"	"10.7"	"100.000"	"103.2473"	"36894"	"36894"	"36873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"11.0"	""	"12.9"	""	"19.4"	""	"20.8"	"25.3"	""	"893"	"12"	"36.000"	"29.000"	"2.72785614120338"	"14"	"0.004213"	"0.04592"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4583"	"0.0000"	"1"	"1"	"1"	"775.45233"	"1549.89739"	"1549.89902"	"-1.05"	"-0.00081"	"8/86"	"8"	"86"	"176298.639648438"	"HCD"	"MS2"	"20.2083"	"13.9"	"100.000"	"102.9680"	"36767"	"36767"	"36746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.7"	""	"14.9"	""	"16.4"	""	"26.7"	""	"34.3"	"28.7"	""	"893"	"48"	"36.000"	"29.000"	"0.000761765786689894"	"22"	"0"	"4.229E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6034"	"0.0000"	"1"	"1"	"1"	"517.30408"	"1549.89768"	"1549.89902"	"-0.86"	"-0.00045"	"8/86"	"8"	"86"	"2447972.39581299"	"HCD"	"MS2"	"3.775047"	"69.2"	"100.000"	"102.7123"	"36685"	"36685"	"36671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.3"	""	"65.9"	""	"74.5"	""	"145.6"	"0.3"	"157.8"	"145.9"	""	"894"	"58"	"36.000"	"29.000"	"7.87603292745999E-05"	"22"	"0"	"5.378E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"517.30432"	"1549.89841"	"1549.89902"	"-0.39"	"-0.00020"	"12/86"	"12"	"86"	"1297833.86364746"	"HCD"	"MS2"	"5.62119"	"40.2"	"100.000"	"103.0055"	"36803"	"36803"	"36786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.0"	""	"31.8"	""	"46.5"	""	"85.3"	"2.1"	"91.4"	"89.9"	""	"896"	"46"	"36.000"	"29.000"	"0.00112015472204"	"18"	"0.0001686"	"0.00148"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPAYGLSAEVK"	"[R].gPAYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"3"	"3"	"0.7170"	"0.0000"	"1"	"1"	"1"	"517.30432"	"1549.89841"	"1549.89901"	"-0.39"	"-0.00020"	"13/84"	"13"	"84"	"1295911.50939941"	"HCD"	"MS2"	"10.45615"	"34.8"	"100.000"	"75.0412"	"25483"	"25483"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"37.7"	""	"56.5"	""	"59.6"	"2.2"	"68.7"	"57.8"	""	"896"	"53"	"36.000"	"29.000"	"0.000230291555908927"	""	"0"	"0.0003394"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPAYGLSAEVK"	"[R].gPAYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8868"	"0.0000"	"1"	"1"	"1"	"775.45294"	"1549.89861"	"1549.89901"	"-0.26"	"-0.00020"	"16/84"	"16"	"84"	"339384.706787109"	"HCD"	"MS2"	"29.14012"	"30.4"	"100.000"	"74.8014"	"25386"	"25386"	"25361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"30.2"	""	"52.1"	""	"44.0"	""	"53.5"	"57.9"	""	"880"	"53"	"36.000"	"29.000"	"0.000215502680522116"	"22"	"0"	"4E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"775.45306"	"1549.89885"	"1549.89902"	"-0.11"	"-0.00008"	"8/86"	"8"	"86"	"3208555.24279785"	"HCD"	"MS2"	"3.604925"	"233.8"	"100.000"	"102.6522"	"36639"	"36639"	"36625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"211.5"	""	"198.1"	""	"242.8"	""	"505.0"	""	"529.8"	"541.1"	""	"880"	"38"	"36.000"	"29.000"	"0.00665966949311931"	"19"	"0"	"5.251E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPAYGLSAEVK"	"[R].gPAYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"775.45319"	"1549.89910"	"1549.89901"	"0.05"	"0.00004"	"9/84"	"9"	"84"	"308560.356628418"	"HCD"	"MS2"	"29.7691"	"29.1"	"100.000"	"74.9177"	"25464"	"25464"	"25443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"37.3"	""	"44.0"	""	"38.9"	"0.6"	"52.4"	"58.5"	""	"880"	"49"	"36.000"	"29.000"	"0.000605972166313336"	"24"	"0"	"0.0003067"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5968"	"0.0000"	"1"	"1"	"1"	"517.30457"	"1549.89914"	"1549.89902"	"0.08"	"0.00004"	"8/86"	"8"	"86"	"1462417.78039551"	"HCD"	"MS2"	"3.403147"	"42.1"	"100.000"	"102.7673"	"36685"	"36685"	"36669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.4"	""	"31.6"	""	"52.8"	""	"85.6"	""	"92.8"	"103.5"	""	"876"	"62"	"36.000"	"29.000"	"2.78916438157667E-05"	"24"	"0"	"0.0001092"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPAYGLSAEVK"	"[R].gPAYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"775.45325"	"1549.89922"	"1549.89901"	"0.13"	"0.00010"	"9/84"	"9"	"84"	"346965.210021973"	"HCD"	"MS2"	"25.93719"	"32.1"	"100.000"	"75.1150"	"25513"	"25513"	"25492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.5"	""	"41.5"	""	"51.2"	""	"37.8"	"0.7"	"62.8"	"53.3"	""	"876"	"46"	"36.000"	"29.000"	"0.00114412667322685"	"25"	"0"	"5.607E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPAYGLSAEVK"	"[R].gPAYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"Q08290"	"Calponin-1 OS=Rattus norvegicus OX=10116 GN=Cnn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"775.45325"	"1549.89922"	"1549.89901"	"0.13"	"0.00010"	"15/84"	"15"	"84"	"290112.295532227"	"HCD"	"MS2"	"16.70138"	"26.0"	"100.000"	"75.2820"	"25612"	"25612"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"34.9"	""	"47.1"	""	"37.0"	""	"50.5"	"40.6"	""	"876"	"46"	"36.000"	"29.000"	"0.00118706393476819"	"22"	"0.0001686"	"0.001274"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.5968"	"0.0000"	"1"	"1"	"1"	"517.30463"	"1549.89933"	"1549.89902"	"0.20"	"0.00010"	"8/86"	"8"	"86"	"2207228.04351807"	"HCD"	"MS2"	"4.942859"	"58.2"	"100.000"	"102.4813"	"36570"	"36570"	"36554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.8"	""	"52.0"	""	"62.3"	""	"128.8"	""	"127.6"	"123.8"	""	"876"	"62"	"36.000"	"29.000"	"2.78916438157667E-05"	"24"	"0"	"8.189E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5366"	"0.0000"	"1"	"1"	"1"	"775.45349"	"1549.89971"	"1549.89902"	"0.45"	"0.00035"	"7/86"	"7"	"86"	"3002554.20678711"	"HCD"	"MS2"	"3.832908"	"221.8"	"100.000"	"102.8651"	"36747"	"36747"	"36733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.7"	""	"182.1"	""	"245.0"	""	"477.7"	""	"491.5"	"519.5"	""	"889"	"41"	"36.000"	"29.000"	"0.00376592585585495"	"20"	"0"	"2.191E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5116"	"0.0000"	"1"	"1"	"1"	"775.45496"	"1549.90264"	"1549.89902"	"2.34"	"0.00181"	"13/86"	"13"	"86"	"474056.931213379"	"HCD"	"MS2"	"15.72294"	"40.8"	"100.000"	"102.3702"	"36525"	"36525"	"36512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"43.5"	""	"45.7"	""	"84.8"	""	"89.7"	"86.1"	""	"882"	"43"	"36.000"	"29.000"	"0.00223068675943373"	"22"	"0"	"0.0001337"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFNDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.5588"	"0.0000"	"1"	"1"	"1"	"775.45624"	"1549.90520"	"1549.89902"	"3.99"	"0.00309"	"12/86"	"12"	"86"	"474367.637634277"	"HCD"	"MS2"	"0"	"39.3"	"100.000"	"102.5850"	"36636"	"36636"	"36611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.6"	""	"31.1"	""	"40.6"	""	"86.4"	""	"90.2"	"80.8"	""	"914"	"34"	"36.000"	"29.000"	"0.0203196489233383"	"27"	"0"	"8.83E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"775.89600"	"1550.78472"	"1550.78681"	"-1.35"	"-0.00105"	"6/96"	"6"	"96"	"351233.986022949"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"77.0625"	"26303"	"26303"	"26287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"33.1"	""	"32.2"	""	"24.7"	"1.9"	"48.7"	"59.9"	""	"799"	"36"	"36.000"	"29.000"	"0.00967201104171105"	"16"	"0"	"0.0001484"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"775.89606"	"1550.78484"	"1550.78681"	"-1.27"	"-0.00099"	"9/96"	"9"	"96"	"2055751.15606689"	"HCD"	"MS2"	"0"	"111.1"	"100.000"	"76.8875"	"26265"	"26265"	"26250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.0"	""	"144.8"	""	"143.0"	""	"114.5"	"1.7"	"223.6"	"254.7"	""	"811"	"48"	"36.000"	"29.000"	"0.000639721369863086"	"21"	"0"	"4.319E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"775.89624"	"1550.78520"	"1550.78681"	"-1.04"	"-0.00081"	"14/96"	"14"	"96"	"274669.350036621"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"77.1593"	"26372"	"26372"	"26361"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"30.7"	""	"29.5"	""	"23.2"	""	"48.7"	"43.8"	""	"811"	"34"	"36.000"	"29.000"	"0.0146889535857971"	"18"	"0"	"0.0003564"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"775.89636"	"1550.78545"	"1550.78681"	"-0.88"	"-0.00068"	"9/96"	"9"	"96"	"739773.35144043"	"HCD"	"MS2"	"24.22702"	"49.1"	"100.000"	"76.5909"	"26145"	"26145"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"73.2"	""	"58.3"	""	"57.7"	""	"103.2"	"101.7"	""	"814"	"50"	"36.000"	"29.000"	"0.00045039588007891"	"26"	"0"	"1.543E-06"	"1.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"775.89648"	"1550.78569"	"1550.78681"	"-0.72"	"-0.00056"	"9/96"	"9"	"96"	"2270803.50170898"	"HCD"	"MS2"	"0"	"120.6"	"100.000"	"76.7716"	"26187"	"26187"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.7"	""	"156.4"	""	"159.2"	""	"133.4"	""	"250.8"	"260.6"	""	"819"	"48"	"36.000"	"29.000"	"0.000625538300848491"	"21"	"0"	"6.687E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"775.89679"	"1550.78630"	"1550.78681"	"-0.33"	"-0.00026"	"8/96"	"8"	"96"	"522891.942565918"	"HCD"	"MS2"	"25.9047"	"37.2"	"100.000"	"76.4747"	"26066"	"26066"	"26047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.2"	""	"50.3"	""	"46.3"	""	"42.4"	""	"74.7"	"76.0"	""	"835"	"35"	"36.000"	"29.000"	"0.0143435443248198"	"18"	"0"	"6.282E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYDANYDGK"	"[K].fYDANYDGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3B8Q0"	"Microtubule-associated protein RP/EB family member 2 OS=Rattus norvegicus OX=10116 GN=Mapre2 PE=1 SV=1"	"Q3B8Q0"	"Microtubule-associated protein RP/EB family member 2 OS=Rattus norvegicus OX=10116 GN=Mapre2 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"775.89838"	"1550.78948"	"1550.78913"	"0.22"	"0.00017"	"12/80"	"12"	"80"	"254844.033569336"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"75.6714"	"25771"	"25771"	"25745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"29.7"	""	"36.6"	""	"55.3"	"0.2"	"42.5"	"51.7"	""	"829"	"33"	"36.000"	"29.000"	"0.021454803184351"	"20"	"0.0001686"	"0.001869"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYDANYDGK"	"[K].fYDANYDGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q3B8Q0"	"Microtubule-associated protein RP/EB family member 2 OS=Rattus norvegicus OX=10116 GN=Mapre2 PE=1 SV=1"	"Q3B8Q0"	"Microtubule-associated protein RP/EB family member 2 OS=Rattus norvegicus OX=10116 GN=Mapre2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"775.89868"	"1550.79009"	"1550.78913"	"0.62"	"0.00048"	"5/80"	"5"	"80"	"214144.061645508"	"HCD"	"MS2"	"19.8886"	"24.2"	"100.000"	"75.4951"	"25668"	"25668"	"25647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.2"	""	"26.1"	""	"28.0"	""	"39.4"	""	"48.9"	"48.6"	""	"833"	"25"	"36.000"	"29.000"	"0.136023832099778"	"14"	"0.0005778"	"0.00705"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.9348"	"0.0000"	"1"	"1"	"1"	"775.90356"	"1550.79985"	"1550.80457"	"-3.04"	"-0.00236"	"11/104"	"11"	"104"	"827517.124694824"	"HCD"	"MS2"	"38.197"	"50.3"	"100.000"	"72.2882"	"24395"	"24395"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.4"	""	"59.1"	""	"63.3"	""	"64.4"	"2.3"	"106.0"	"115.7"	""	"888"	"46"	"36.000"	"29.000"	"0.00121445931448018"	"18"	"0"	"9.309E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"775.90466"	"1550.80205"	"1550.80457"	"-1.63"	"-0.00126"	"11/104"	"11"	"104"	"1039240.83325195"	"HCD"	"MS2"	"23.31652"	"59.3"	"100.000"	"72.1965"	"24328"	"24328"	"24304"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.7"	""	"72.4"	""	"70.3"	""	"77.5"	""	"126.1"	"123.0"	""	"893"	"49"	"36.000"	"29.000"	"0.000545533548263614"	"23"	"0"	"3.915E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"517.60596"	"1550.80332"	"1550.80457"	"-0.81"	"-0.00042"	"15/104"	"15"	"104"	"4459220.06292725"	"HCD"	"MS2"	"6.968182"	"33.2"	"100.000"	"72.5334"	"24465"	"24465"	"24448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.7"	""	"37.4"	"1.8"	"38.9"	""	"47.6"	""	"73.8"	"74.7"	""	"888"	"58"	"36.000"	"29.000"	"6.81369940362886E-05"	"25"	"0"	"3.672E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"775.90552"	"1550.80376"	"1550.80457"	"-0.52"	"-0.00041"	"10/104"	"10"	"104"	"235929.688171387"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"72.8123"	"24578"	"24578"	"24554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"23.3"	""	"15.7"	""	"24.3"	""	"39.5"	"40.7"	""	"899"	"21"	"36.000"	"29.000"	"0.319690474387171"	"17"	"0.0001991"	"0.003514"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"775.90552"	"1550.80376"	"1550.80457"	"-0.52"	"-0.00041"	"7/104"	"7"	"104"	"353366.375244141"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"72.8851"	"24637"	"24637"	"24616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.9"	""	"26.5"	""	"31.8"	""	"35.7"	"0.6"	"46.9"	"49.9"	""	"899"	"47"	"36.000"	"29.000"	"0.000890696398099391"	"24"	"0"	"7.732E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8305"	"0.0000"	"1"	"1"	"1"	"517.60614"	"1550.80387"	"1550.80457"	"-0.45"	"-0.00024"	"9/104"	"9"	"104"	"4371467.18334961"	"HCD"	"MS2"	"5.422159"	"31.0"	"100.000"	"72.6175"	"24528"	"24528"	"24510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.9"	""	"43.3"	""	"34.0"	""	"38.8"	""	"68.2"	"67.8"	""	"898"	"59"	"36.000"	"29.000"	"6.09882737517632E-05"	"26"	"0"	"1.459E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"517.60620"	"1550.80405"	"1550.80457"	"-0.34"	"-0.00017"	"13/104"	"13"	"104"	"2185735.64367676"	"HCD"	"MS2"	"17.73611"	"22.3"	"100.000"	"72.3112"	"24404"	"24404"	"24386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"28.1"	""	"27.9"	""	"33.3"	""	"43.5"	"51.3"	""	"893"	"52"	"36.000"	"29.000"	"0.000303264421963573"	"24"	"0"	"6.433E-06"	"0.899"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"517.60620"	"1550.80405"	"1550.80457"	"-0.34"	"-0.00017"	"14/104"	"14"	"104"	"2544265.76385498"	"HCD"	"MS2"	"11.75848"	"21.7"	"100.000"	"72.2241"	"24339"	"24339"	"24320"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"23.8"	""	"24.9"	""	"35.7"	""	"42.0"	"53.7"	""	"893"	"48"	"36.000"	"29.000"	"0.000761765786689894"	"23"	"0"	"4.491E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"775.90582"	"1550.80437"	"1550.80457"	"-0.13"	"-0.00010"	"9/104"	"9"	"104"	"1980351.44958496"	"HCD"	"MS2"	"0"	"103.2"	"100.000"	"72.5036"	"24452"	"24452"	"24432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"144.3"	""	"124.1"	""	"121.6"	""	"130.1"	""	"222.5"	"240.6"	""	"893"	"58"	"36.000"	"29.000"	"6.54367110986814E-05"	"24"	"0"	"3.455E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLTSQR"	"[K].aGEMTEVLTSQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"775.90588"	"1550.80449"	"1550.80457"	"-0.05"	"-0.00004"	"9/104"	"9"	"104"	"2139283.42767334"	"HCD"	"MS2"	"0"	"109.3"	"100.000"	"72.5806"	"24513"	"24513"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.7"	""	"132.7"	""	"119.1"	""	"142.8"	""	"239.2"	"259.2"	""	"893"	"63"	"36.000"	"29.000"	"2.33787594935537E-05"	""	"0"	"1.92E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AITNLDVEQYR"	"[K].aITNLDVEQYR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"P35571"	"Glycerol-3-phosphate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Gpd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"775.92194"	"1550.83660"	"1550.83759"	"-0.64"	"-0.00050"	"6/104"	"6"	"104"	"202482.996276855"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"84.9185"	"29481"	"29481"	"29456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"17.1"	""	"19.0"	""	"26.3"	""	"27.7"	"26.2"	""	"989"	"29"	"36.000"	"29.000"	"0.0667062145441572"	"16"	"0.0001991"	"0.00443"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPQSDGSSSK"	"[K].vTPQSDGSSSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"775.92371"	"1550.84014"	"1550.84262"	"-1.60"	"-0.00124"	"8/110"	"8"	"110"	"163469.470947266"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"30.8934"	"7578"	"7578"	"7565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.9"	""	"12.6"	""	"16.2"	""	"25.3"	""	"18.5"	"20.8"	""	"987"	"40"	"36.000"	"29.000"	"0.00488975564804581"	"16"	"0.0001991"	"0.005548"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVMQQLLTTR"	"[K].dTVmQQLLTTR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"775.92371"	"1550.84014"	"1550.84096"	"-0.53"	"-0.00041"	"13/110"	"13"	"110"	"353441.61151123"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"62.3688"	"20341"	"20341"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.8"	""	"18.7"	""	"17.1"	""	"65.3"	""	"58.1"	"58.2"	""	"987"	"21"	"36.000"	"29.000"	"0.366679944552022"	"20"	"0.004713"	"0.05527"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPQSDGSSSK"	"[K].vTPQSDGSSSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"775.92438"	"1550.84148"	"1550.84262"	"-0.74"	"-0.00057"	"9/110"	"9"	"110"	"391322.018493652"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"30.4294"	"7436"	"7436"	"7415"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.5"	""	"33.4"	""	"39.6"	""	"40.2"	"1.0"	"44.7"	"51.5"	""	"996"	"51"	"36.000"	"29.000"	"0.000364946617503174"	"17"	"0.0001686"	"0.001338"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPQSDGSSSK"	"[K].vTPQSDGSSSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"775.92474"	"1550.84221"	"1550.84262"	"-0.27"	"-0.00021"	"8/110"	"8"	"110"	"241040.643615723"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"30.7296"	"7551"	"7551"	"7534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.9"	""	"15.5"	""	"26.3"	""	"26.5"	""	"31.0"	"32.5"	""	"984"	"42"	"36.000"	"29.000"	"0.00316202356919974"	"17"	"0.0001991"	"0.003747"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTPQSDGSSSK"	"[K].vTPQSDGSSSk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9730"	"0.0000"	"1"	"1"	"1"	"775.92535"	"1550.84343"	"1550.84262"	"0.52"	"0.00040"	"9/110"	"9"	"110"	"474064.038330078"	"HCD"	"MS2"	"100"	"37.9"	"100.000"	"30.6159"	"7470"	"7470"	"7459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.8"	""	"50.1"	""	"42.4"	""	"67.4"	""	"69.7"	"60.6"	""	"1012"	"37"	"37.000"	"30.000"	"0.00933577802104813"	"16"	"0.0001686"	"0.001149"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVMQQLLTTR"	"[K].dTVmQQLLTTR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"775.92542"	"1550.84355"	"1550.84096"	"1.67"	"0.00130"	"6/110"	"6"	"110"	"454955.873291016"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"62.0652"	"20251"	"20251"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"19.2"	""	"23.9"	""	"85.2"	""	"71.1"	"67.1"	""	"1008"	"29"	"37.000"	"30.000"	"0.0611547980634348"	"18"	"0.001103"	"0.009033"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTVMQQLLTTR"	"[K].dTVmQQLLTTR.[R]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"775.92639"	"1550.84551"	"1550.84096"	"2.93"	"0.00227"	"8/110"	"8"	"110"	"323884.964660645"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"62.0437"	"20209"	"20209"	"20183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"17.3"	""	"16.1"	""	"55.1"	""	"56.3"	"56.9"	""	"1004"	"32"	"37.000"	"30.000"	"0.0337057284168828"	"21"	"0.002525"	"0.02476"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"517.63232"	"1550.88242"	"1550.88303"	"-0.39"	"-0.00020"	"8/86"	"8"	"86"	"1623602.3237915"	"HCD"	"MS2"	"4.246627"	"43.9"	"100.000"	"106.7771"	"38301"	"38301"	"38288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.3"	""	"46.9"	""	"56.1"	""	"84.9"	"0.0"	"89.2"	"87.4"	""	"969"	"54"	"36.000"	"29.000"	"0.000193327565194458"	"24"	"0"	"9.684E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"775.94489"	"1550.88249"	"1550.88303"	"-0.35"	"-0.00027"	"8/86"	"8"	"86"	"665752.978027344"	"HCD"	"MS2"	"0"	"51.0"	"100.000"	"107.6881"	"38657"	"38657"	"38649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.5"	""	"38.7"	""	"50.5"	""	"123.0"	""	"118.1"	"112.5"	""	"967"	"55"	"36.000"	"29.000"	"0.000165728224795209"	"21"	"0"	"3.637E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"775.94501"	"1550.88274"	"1550.88303"	"-0.19"	"-0.00015"	"9/86"	"9"	"86"	"681074.413452148"	"HCD"	"MS2"	"0"	"55.6"	"100.000"	"109.5188"	"39331"	"39331"	"39320"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.9"	""	"54.0"	""	"67.5"	""	"100.8"	""	"129.9"	"124.2"	""	"967"	"61"	"36.000"	"29.000"	"3.51072230419897E-05"	"24"	"0"	"4.197E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9636"	"0.0000"	"1"	"1"	"1"	"775.94507"	"1550.88286"	"1550.88303"	"-0.11"	"-0.00009"	"14/86"	"14"	"86"	"212110.993896484"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"107.9847"	"38748"	"38748"	"38741"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"13.2"	""	"20.0"	""	"30.0"	"1.2"	"39.1"	"43.4"	""	"967"	"55"	"36.000"	"29.000"	"0.000166876997968887"	"18"	"0"	"3.335E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"775.94513"	"1550.88298"	"1550.88303"	"-0.03"	"-0.00002"	"5/86"	"5"	"86"	"158980.57019043"	"HCD"	"MS2"	"46.56897"	"11.8"	"100.000"	"106.5876"	"38226"	"38226"	"38209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"12.6"	""	"13.2"	""	"22.5"	""	"23.2"	"25.2"	""	"967"	"19"	"36.000"	"29.000"	"0.560268851701004"	"15"	"0.001261"	"0.01003"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"775.94513"	"1550.88298"	"1550.88303"	"-0.03"	"-0.00002"	"13/86"	"13"	"86"	"293993.149047852"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"108.2111"	"38853"	"38853"	"38847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"18.7"	""	"27.6"	""	"52.8"	""	"57.2"	"61.0"	""	"967"	"37"	"36.000"	"29.000"	"0.00910744334768319"	"22"	"0"	"6.203E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"775.94513"	"1550.88298"	"1550.88303"	"-0.03"	"-0.00002"	"9/86"	"9"	"86"	"783714.82232666"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"109.2380"	"39212"	"39212"	"39206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"61.5"	""	"70.0"	""	"109.9"	""	"138.1"	"141.0"	""	"967"	"58"	"36.000"	"29.000"	"6.89281271506658E-05"	"24"	"0"	"2.26E-06"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"775.94519"	"1550.88310"	"1550.88303"	"0.05"	"0.00004"	"9/86"	"9"	"86"	"132110.828063965"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"108.2515"	"38847"	"38847"	"38837"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"8.9"	""	"11.3"	""	"21.1"	""	"22.9"	"25.6"	""	"967"	"25"	"36.000"	"29.000"	"0.141382767468725"	"22"	"0.002559"	"0.02545"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"775.94519"	"1550.88310"	"1550.88303"	"0.05"	"0.00004"	"5/86"	"5"	"86"	"183745.352478027"	"HCD"	"MS2"	"7.01178"	"15.1"	"100.000"	"111.3814"	"40082"	"40082"	"40060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.8"	""	"16.8"	""	"13.3"	""	"30.0"	""	"35.5"	"32.4"	""	"967"	"17"	"36.000"	"29.000"	"0.898248454036837"	"14"	"0.0065"	"0.08043"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"517.63257"	"1550.88315"	"1550.88303"	"0.08"	"0.00004"	"8/86"	"8"	"86"	"2061310.4675293"	"HCD"	"MS2"	"9.776425"	"55.4"	"100.000"	"106.5242"	"38182"	"38182"	"38167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.8"	""	"55.8"	""	"59.3"	""	"108.2"	"0.8"	"124.1"	"119.9"	""	"967"	"49"	"36.000"	"29.000"	"0.000552581674870855"	"22"	"0"	"0.0001759"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"775.94525"	"1550.88323"	"1550.88303"	"0.13"	"0.00010"	"9/86"	"9"	"86"	"206032.065002441"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"111.2866"	"40030"	"40030"	"40007"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"19.0"	""	"19.4"	""	"43.6"	""	"31.8"	"36.8"	""	"964"	"28"	"36.000"	"29.000"	"0.0822331711499506"	"20"	"0.001348"	"0.01072"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"775.94531"	"1550.88335"	"1550.88303"	"0.20"	"0.00016"	"8/86"	"8"	"86"	"548256.573608398"	"HCD"	"MS2"	"0"	"40.2"	"100.000"	"107.9460"	"38755"	"38755"	"38747"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.4"	""	"34.9"	""	"35.2"	""	"86.8"	"0.8"	"99.9"	"83.5"	""	"964"	"56"	"36.000"	"29.000"	"0.000111441522886464"	"22"	"0"	"7.955E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"775.94531"	"1550.88335"	"1550.88303"	"0.20"	"0.00016"	"8/86"	"8"	"86"	"1137603.4465332"	"HCD"	"MS2"	"3.310315"	"92.0"	"100.000"	"107.1428"	"38447"	"38447"	"38436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.8"	""	"92.0"	""	"105.4"	""	"172.2"	""	"188.7"	"213.6"	""	"964"	"50"	"36.000"	"29.000"	"0.000451904887338274"	"17"	"0"	"5.962E-06"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"775.94531"	"1550.88335"	"1550.88303"	"0.20"	"0.00016"	"9/86"	"9"	"86"	"2843996.42926025"	"HCD"	"MS2"	"0"	"214.8"	"100.000"	"106.8673"	"38337"	"38337"	"38323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.2"	""	"237.3"	""	"224.8"	""	"414.8"	"2.9"	"462.3"	"449.6"	""	"964"	"62"	"36.000"	"29.000"	"3.24374748329041E-05"	"20"	"0"	"6.619E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"775.94543"	"1550.88359"	"1550.88303"	"0.36"	"0.00028"	"5/86"	"5"	"86"	"122103.552185059"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"107.4252"	"38557"	"38557"	"38549"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.8"	""	"8.9"	""	"10.5"	""	"24.2"	""	"25.0"	"21.1"	""	"970"	"22"	"36.000"	"29.000"	"0.324894035567015"	"18"	"0.001453"	"0.01158"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"775.94543"	"1550.88359"	"1550.88303"	"0.36"	"0.00028"	"14/86"	"14"	"86"	"861536.661987305"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"107.4386"	"38541"	"38541"	"38533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.0"	""	"49.0"	""	"55.8"	""	"136.1"	"1.2"	"142.2"	"128.1"	""	"970"	"52"	"36.000"	"29.000"	"0.000339423368061103"	"22"	"0"	"4.251E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8043"	"0.0000"	"1"	"1"	"1"	"775.94556"	"1550.88384"	"1550.88303"	"0.52"	"0.00040"	"13/86"	"13"	"86"	"351875.322631836"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"107.7009"	"38640"	"38640"	"38632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"18.8"	""	"28.4"	""	"56.9"	""	"65.1"	"59.4"	""	"959"	"46"	"36.000"	"29.000"	"0.0013390247718733"	"24"	"0"	"9.217E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9516"	"0.0000"	"1"	"1"	"1"	"775.94556"	"1550.88384"	"1550.88303"	"0.52"	"0.00040"	"9/86"	"9"	"86"	"3176117.82995605"	"HCD"	"MS2"	"0"	"226.3"	"100.000"	"106.5984"	"38212"	"38212"	"38206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"254.4"	""	"236.3"	""	"261.3"	""	"433.9"	""	"492.0"	"476.7"	""	"959"	"62"	"36.000"	"29.000"	"3.2567814183994E-05"	"19"	"0"	"7.188E-06"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"775.94562"	"1550.88396"	"1550.88303"	"0.60"	"0.00046"	"13/86"	"13"	"86"	"844934.259521484"	"HCD"	"MS2"	"2.881184"	"71.1"	"100.000"	"106.8918"	"38330"	"38330"	"38320"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"77.6"	""	"79.2"	""	"121.7"	""	"156.9"	"169.8"	""	"951"	"46"	"36.000"	"29.000"	"0.00127688128391062"	"18"	"0"	"9.594E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.8250"	"0.0000"	"1"	"1"	"1"	"775.94574"	"1550.88420"	"1550.88303"	"0.76"	"0.00059"	"8/86"	"8"	"86"	"317725.823913574"	"HCD"	"MS2"	"26.28908"	"23.1"	"100.000"	"109.2373"	"39227"	"39227"	"39220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"23.3"	""	"23.9"	""	"49.2"	""	"49.3"	"45.7"	""	"955"	"40"	"36.000"	"29.000"	"0.00451828244552166"	"22"	"0"	"0.0002531"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"775.94580"	"1550.88432"	"1550.88303"	"0.83"	"0.00065"	"5/86"	"5"	"86"	"137425.219055176"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"107.1765"	"38441"	"38441"	"38428"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"9.0"	""	"9.5"	""	"18.6"	""	"26.2"	"17.1"	""	"956"	"20"	"36.000"	"29.000"	"0.520508584613382"	"26"	"0.002711"	"0.02839"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"775.94617"	"1550.88506"	"1550.88303"	"1.31"	"0.00101"	"5/86"	"5"	"86"	"198306.486572266"	"HCD"	"MS2"	"14.27035"	"17.3"	"100.000"	"106.3256"	"38103"	"38103"	"38094"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"20.4"	""	"19.8"	""	"35.5"	""	"31.6"	"33.8"	""	"942"	"21"	"36.000"	"29.000"	"0.345956031902001"	"18"	"0.002462"	"0.0233"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VINAFNDGLK"	"[K].vInAFnDGLk.[H]"	"N-Term(TMT6plex); N3(Deamidated); N6(Deamidated); K10(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"775.94617"	"1550.88506"	"1550.88303"	"1.31"	"0.00101"	"8/86"	"8"	"86"	"438203.811401367"	"HCD"	"MS2"	"25.80314"	"35.7"	"100.000"	"108.9799"	"39117"	"39117"	"39107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"38.8"	""	"31.3"	""	"67.9"	"1.0"	"77.0"	"84.9"	""	"942"	"53"	"36.000"	"29.000"	"0.00021979656812803"	"20"	"0"	"3.816E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEEELFSVR"	"[R].sQVEEELFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"776.41364"	"1551.81999"	"1551.82160"	"-1.04"	"-0.00080"	"8/114"	"8"	"114"	"279811.285400391"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"99.9630"	"35577"	"35577"	"35558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"23.7"	""	"22.5"	""	"24.1"	""	"25.9"	"37.0"	""	"945"	"66"	"36.000"	"29.000"	"1.23424623995362E-05"	"24"	"0"	"4.877E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQVEEELFSVR"	"[R].sQVEEELFSVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"776.41449"	"1551.82170"	"1551.82160"	"0.06"	"0.00005"	"8/114"	"8"	"114"	"326763.678894043"	"HCD"	"MS2"	"6.031378"	"20.1"	"100.000"	"99.9133"	"35529"	"35529"	"35508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.7"	""	"23.0"	""	"25.9"	""	"26.9"	""	"40.9"	"47.5"	""	"946"	"58"	"36.000"	"29.000"	"6.99618267603562E-05"	"20"	"0"	"8.239E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"776.91699"	"1552.82671"	"1552.82928"	"-1.66"	"-0.00129"	"7/82"	"7"	"82"	"693877.421325684"	"HCD"	"MS2"	"0"	"53.6"	"100.000"	"51.3842"	"15881"	"15881"	"15853"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.1"	""	"50.6"	""	"52.6"	""	"157.0"	""	"88.9"	"92.7"	""	"921"	"35"	"36.000"	"29.000"	"0.0161521237955158"	"23"	"0.002711"	"0.02871"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"776.91760"	"1552.82793"	"1552.82928"	"-0.87"	"-0.00068"	"7/82"	"7"	"82"	"826037.914428711"	"HCD"	"MS2"	"22.59818"	"63.3"	"100.000"	"51.0681"	"15789"	"15789"	"15766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.3"	""	"56.4"	""	"58.9"	""	"188.0"	"0.7"	"108.8"	"103.2"	""	"909"	"33"	"36.000"	"29.000"	"0.0249191880556528"	"23"	"0.001453"	"0.01182"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.5789"	"0.0000"	"1"	"1"	"1"	"776.91772"	"1552.82817"	"1552.82928"	"-0.71"	"-0.00055"	"7/82"	"7"	"82"	"755501.592407227"	"HCD"	"MS2"	"0"	"61.7"	"100.000"	"51.7073"	"16011"	"16011"	"15994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.6"	""	"47.9"	""	"57.9"	""	"183.3"	"0.1"	"114.6"	"111.2"	""	"935"	"38"	"36.000"	"29.000"	"0.00734144611025936"	""	"0.0001991"	"0.005599"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEIDMNEIK"	"[R].sEIDmNEIk.[V]"	"N-Term(TMT6plex); M5(Oxidation); K9(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"776.91827"	"1552.82927"	"1552.82928"	"-0.01"	"0.00000"	"7/82"	"7"	"82"	"654557.575073242"	"HCD"	"MS2"	"0"	"48.9"	"100.000"	"51.3895"	"15916"	"15916"	"15898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.8"	""	"42.1"	""	"46.9"	""	"142.5"	""	"86.6"	"89.0"	""	"932"	"36"	"36.000"	"29.000"	"0.0108489052607189"	"25"	"0.001615"	"0.01371"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"776.93915"	"1552.87102"	"1552.87353"	"-1.62"	"-0.00125"	"6/100"	"6"	"100"	"247113.259338379"	"HCD"	"MS2"	"17.34979"	"23.2"	"100.000"	"70.5775"	"23706"	"23706"	"23689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"31.9"	""	"27.1"	""	"37.1"	""	"50.8"	"34.0"	""	"952"	"21"	"36.000"	"29.000"	"0.356949643642249"	"23"	"0.0001991"	"0.003496"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"518.29578"	"1552.87278"	"1552.87353"	"-0.48"	"-0.00025"	"7/100"	"7"	"100"	"2248484.66650391"	"HCD"	"MS2"	"12.61629"	"70.2"	"100.000"	"70.1129"	"23484"	"23484"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.9"	""	"98.9"	""	"78.5"	""	"109.1"	""	"133.0"	"128.7"	""	"922"	"44"	"36.000"	"29.000"	"0.0020450358485239"	"22"	"0"	"9.784E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"776.94006"	"1552.87285"	"1552.87353"	"-0.44"	"-0.00034"	"9/100"	"9"	"100"	"1065566.39355469"	"HCD"	"MS2"	"0"	"101.4"	"100.000"	"70.2618"	"23578"	"23578"	"23563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.0"	""	"161.9"	""	"121.9"	""	"154.0"	""	"163.0"	"176.0"	""	"922"	"72"	"36.000"	"29.000"	"2.6345165150573E-06"	""	"0"	"5.517E-07"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"518.29584"	"1552.87296"	"1552.87353"	"-0.37"	"-0.00019"	"7/100"	"7"	"100"	"2140986.41400146"	"HCD"	"MS2"	"23.81037"	"69.7"	"100.000"	"70.1350"	"23527"	"23527"	"23512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.5"	""	"91.7"	""	"91.8"	""	"113.5"	"0.1"	"121.9"	"130.3"	""	"922"	"42"	"36.000"	"29.000"	"0.00274600248166874"	"21"	"0"	"8.582E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qNEGFSLTAk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.8154"	"0.0000"	"1"	"1"	"1"	"776.94055"	"1552.87383"	"1552.87353"	"0.19"	"0.00015"	"9/100"	"9"	"100"	"1062515.11090088"	"HCD"	"MS2"	"0"	"106.1"	"100.000"	"70.2208"	"23528"	"23528"	"23512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.8"	""	"157.0"	""	"99.1"	""	"171.4"	"0.6"	"188.9"	"181.2"	""	"902"	"65"	"36.000"	"29.000"	"1.55659826440471E-05"	"29"	"0"	"2.552E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].QIGENLIVPGGVk.[T]"	"K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"776.96692"	"1552.92656"	"1552.92601"	"0.36"	"0.00028"	"5/120"	"5"	"120"	"140936.494628906"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"92.6945"	"32647"	"32647"	"32620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.3"	""	"15.5"	""	"11.1"	""	"12.1"	""	"12.4"	"13.2"	""	"551"	"23"	"34.000"	"27.000"	"0.13649652756672"	"19"	"0.004959"	"0.06147"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].QIGENLIVPGGVk.[T]"	"K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"776.96722"	"1552.92717"	"1552.92601"	"0.75"	"0.00058"	"5/120"	"5"	"120"	"145988.308044434"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"92.8084"	"32652"	"32652"	"32624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.1"	""	"9.9"	""	"10.8"	""	"17.6"	""	"11.0"	"10.2"	""	"540"	"30"	"34.000"	"27.000"	"0.0271246263375167"	"22"	"0.001488"	"0.01286"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].QIGENLIVPGGVk.[T]"	"K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"776.96771"	"1552.92815"	"1552.92601"	"1.38"	"0.00107"	"9/120"	"9"	"120"	"7218952.34356689"	"HCD"	"MS2"	"7.547928"	"162.5"	"100.000"	"112.7496"	"40625"	"40625"	"40601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.1"	""	"250.9"	""	"259.4"	""	"241.7"	"0.6"	"249.9"	"295.4"	""	"524"	"41"	"34.000"	"27.000"	"0.00209556574811841"	"19"	"0.001718"	"0.01506"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QIGENLIVPGGVK"	"[K].QIGENLIVPGGVk.[T]"	"K13(TMT6plex)"	"1"	"2"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942; Q62950"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"776.96857"	"1552.92986"	"1552.92601"	"2.48"	"0.00192"	"9/120"	"9"	"120"	"6856186.89404297"	"HCD"	"MS2"	"28.83235"	"149.1"	"100.000"	"112.8052"	"40661"	"40661"	"40639"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.0"	""	"223.1"	""	"224.3"	""	"229.4"	""	"233.9"	"265.5"	""	"476"	"41"	"33.000"	"26.000"	"0.00175217289203747"	"19"	"0.003904"	"0.0424"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGELEQDYK"	"[R].nGELEQDYk.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"P20762"	"Ig gamma-2C chain C region OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"777.41388"	"1553.82048"	"1553.82116"	"-0.44"	"-0.00034"	"11/88"	"11"	"88"	"296588.472473145"	"HCD"	"MS2"	"14.02939"	"27.5"	"100.000"	"47.7450"	"14440"	"14440"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"31.8"	""	"37.9"	""	"43.4"	"0.0"	"48.6"	"54.3"	""	"801"	"27"	"36.000"	"29.000"	"0.0858227685748583"	"20"	"0.0001686"	"0.001052"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGNGNLQGPR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"777.42017"	"1553.83306"	"1553.83457"	"-0.97"	"-0.00076"	"8/130"	"8"	"130"	"198473.793884277"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"38.8749"	"10844"	"10844"	"10814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"13.3"	""	"12.5"	""	"28.5"	""	"27.2"	"23.1"	""	"851"	"45"	"36.000"	"29.000"	"0.00133628644924433"	"25"	"0"	"0.0002721"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELPEYYELIR"	"[K].eLPEYYELIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8K1P7"	"Transcription activator BRG1 OS=Rattus norvegicus OX=10116 GN=Smarca4 PE=1 SV=1"	"Q8K1P7"	"Transcription activator BRG1 OS=Rattus norvegicus OX=10116 GN=Smarca4 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"777.42395"	"1553.84062"	"1553.84128"	"-0.42"	"-0.00033"	"5/84"	"5"	"84"	"154652.874816895"	"HCD"	"MS2"	"14.33698"	"9.0"	"100.000"	"110.5885"	"39746"	"39746"	"39719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"11.1"	""	"8.4"	""	"17.0"	""	"17.1"	"18.6"	""	"869"	"14"	"36.000"	"29.000"	"1.71391697751708"	"17"	"0.007681"	"0.09763"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTSTPEYNVK"	"[R].gTSTPEYNVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"Q8R4C0"	"Calpain-5 OS=Rattus norvegicus OX=10116 GN=Capn5 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"777.43060"	"1553.85393"	"1553.85754"	"-2.33"	"-0.00181"	"7/84"	"7"	"84"	"298091.055236816"	"HCD"	"MS2"	"0"	"28.0"	"100.000"	"44.8866"	"13280"	"13280"	"13255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"29.6"	""	"28.9"	""	"47.3"	""	"61.3"	"63.2"	""	"891"	"40"	"36.000"	"29.000"	"0.00498709577084617"	"23"	"0.003568"	"0.03976"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNEGFSLTAK"	"[K].qnEGFSLTAk.[G]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.2222"	"0.0000"	"1"	"1"	"1"	"777.43115"	"1553.85503"	"1553.85754"	"-1.62"	"-0.00126"	"4/100"	"4"	"100"	"119860.17590332"	"HCD"	"MS2"	"23.51312"	"10.4"	"100.000"	"79.5361"	"27333"	"27333"	"27305"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"11.6"	""	"14.7"	""	"19.2"	""	"18.2"	"20.9"	""	"870"	"9"	"36.000"	"29.000"	"5.33936065553907"	"17"	"0.005712"	"0.07102"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGQYSSPDTK"	"[K].lGQYSSPDTk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"777.43201"	"1553.85674"	"1553.85754"	"-0.52"	"-0.00040"	"9/94"	"9"	"94"	"725018.864501953"	"HCD"	"MS2"	"0"	"59.7"	"100.000"	"54.1461"	"17039"	"17039"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.6"	""	"80.0"	""	"66.8"	""	"77.1"	"1.0"	"109.3"	"112.5"	""	"848"	"46"	"36.000"	"29.000"	"0.00100314995173396"	"20"	"0"	"9.585E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGQYSSPDTK"	"[K].lGQYSSPDTk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"777.43213"	"1553.85698"	"1553.85754"	"-0.36"	"-0.00028"	"12/94"	"12"	"94"	"716664.461669922"	"HCD"	"MS2"	"0"	"60.9"	"100.000"	"54.4567"	"17132"	"17132"	"17112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.3"	""	"87.0"	""	"57.3"	""	"90.8"	"2.6"	"111.4"	"112.6"	""	"846"	"33"	"36.000"	"29.000"	"0.0226120724024919"	"16"	"0"	"0.0003314"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNKR"	"[K].lYEEGSNkR.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.62726"	"1553.86722"	"1553.86878"	"-1.00"	"-0.00052"	"7/74"	"7"	"74"	"10813171.0904541"	"HCD"	"MS2"	"29.55517"	"545.4"	"100.000"	"32.4652"	"8244"	"8244"	"8236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"951.0"	""	"761.5"	""	"838.1"	""	"754.9"	""	"918.0"	"938.4"	""	"838"	"12"	"36.000"	"29.000"	"2.8003610146125"	"14"	"0.001348"	"0.01144"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYEEGSNKR"	"[K].lYEEGSNkR.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"P18422"	"Proteasome subunit alpha type-3 OS=Rattus norvegicus OX=10116 GN=Psma3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"518.62732"	"1553.86740"	"1553.86878"	"-0.88"	"-0.00046"	"7/74"	"7"	"74"	"11003131.4072876"	"HCD"	"MS2"	"27.17518"	"505.6"	"100.000"	"32.5594"	"8247"	"8247"	"8239"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"879.9"	""	"716.8"	""	"766.2"	""	"744.8"	""	"806.5"	"873.5"	""	"836"	"13"	"36.000"	"29.000"	"2.01454179407303"	"13"	"0.001348"	"0.01076"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.4355"	"0.0000"	"1"	"1"	"1"	"777.91077"	"1554.81426"	"1554.81858"	"-2.78"	"-0.00216"	"9/130"	"9"	"130"	"234647.052124023"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"43.8143"	"12810"	"12810"	"12788"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"17.0"	""	"16.8"	""	"31.0"	""	"34.9"	"36.5"	""	"866"	"62"	"36.000"	"29.000"	"2.85422296640791E-05"	""	"0"	"1.579E-06"	"1.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNLGAGNGNLQGPR"	"[R].gNLGAGnGNLQGPR.[H]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"P43244"	"Matrin-3 OS=Rattus norvegicus OX=10116 GN=Matr3 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"777.91290"	"1554.81853"	"1554.81858"	"-0.04"	"-0.00003"	"10/130"	"10"	"130"	"218237.959533691"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"43.6858"	"12793"	"12793"	"12762"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.6"	""	"17.3"	""	"13.1"	""	"23.4"	""	"26.8"	"26.8"	""	"846"	"66"	"36.000"	"29.000"	"1.11004444385162E-05"	"24"	"0"	"2.199E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADDELSFK"	"[K].aTADDELSFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"777.92413"	"1554.84099"	"1554.84156"	"-0.37"	"-0.00028"	"11/84"	"11"	"84"	"224587.000305176"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"78.5130"	"26889"	"26889"	"26866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"20.8"	""	"22.2"	""	"53.4"	""	"60.0"	"59.2"	""	"837"	"32"	"36.000"	"29.000"	"0.025745152122908"	""	"0.0009352"	"0.008071"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADDELSFK"	"[K].aTADDELSFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.4630"	"0.0000"	"1"	"1"	"1"	"777.92456"	"1554.84184"	"1554.84156"	"0.18"	"0.00014"	"9/84"	"9"	"84"	"398057.078857422"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"78.2111"	"26766"	"26766"	"26742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.1"	""	"34.8"	""	"42.2"	""	"83.1"	"0.2"	"91.1"	"75.5"	""	"839"	"54"	"36.000"	"29.000"	"0.000179362630740591"	""	"0"	"7.565E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADDELSFK"	"[K].aTADDELSFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.5091"	"0.0000"	"1"	"1"	"1"	"777.92468"	"1554.84209"	"1554.84156"	"0.34"	"0.00026"	"8/84"	"8"	"84"	"397898.666320801"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"78.2966"	"26827"	"26827"	"26807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.5"	""	"35.2"	""	"47.6"	""	"81.5"	""	"91.8"	"88.3"	""	"839"	"55"	"36.000"	"29.000"	"0.000128449366043324"	""	"0"	"2.034E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATADDELSFK"	"[K].aTADDELSFk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"P62994"	"Growth factor receptor-bound protein 2 OS=Rattus norvegicus OX=10116 GN=Grb2 PE=1 SV=1"	"0"	"2"	"2"	"0.3684"	"0.0000"	"1"	"1"	"1"	"777.92474"	"1554.84221"	"1554.84156"	"0.42"	"0.00033"	"12/84"	"12"	"84"	"214351.44519043"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"78.6142"	"26957"	"26957"	"26935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"22.9"	""	"24.3"	""	"48.6"	""	"51.2"	"53.1"	""	"839"	"38"	"36.000"	"29.000"	"0.00634938943718989"	""	"0.0001991"	"0.002271"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPMNAFMLFAK"	"[K].RPMNAFMLFAk.[K]"	"K11(TMT6plex)"	"1"	"1"	"Q62661"	"HMG box-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Hbp1 PE=1 SV=2"	"Q62661"	"HMG box-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Hbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.3889"	"0.0000"	"1"	"1"	"1"	"777.93225"	"1554.85723"	"1554.84863"	"5.53"	"0.00430"	"5/102"	"5"	"102"	"199752.908447266"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"93.9881"	"33129"	"33129"	"33099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"26.4"	""	"28.7"	""	"28.3"	""	"41.2"	"39.9"	""	"828"	"18"	"36.000"	"29.000"	"0.729458083214414"	"24"	"0.007989"	"0.1014"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.42999"	"1555.85271"	"1555.85290"	"-0.12"	"-0.00010"	"6/106"	"6"	"106"	"199319.013549805"	"HCD"	"MS2"	"17.40425"	"13.9"	"100.000"	"81.6544"	"28193"	"28193"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.9"	""	"14.6"	""	"23.2"	""	"18.1"	""	"29.3"	"30.3"	""	"797"	"13"	"36.000"	"29.000"	"2.2357761844894"	"13"	"0.001348"	"0.01076"	"0.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.43073"	"1555.85417"	"1555.85290"	"0.82"	"0.00064"	"9/106"	"9"	"106"	"181866.74621582"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"81.3454"	"28068"	"28068"	"28039"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"12.0"	""	"11.4"	""	"22.8"	""	"22.4"	"29.6"	""	"782"	"17"	"35.000"	"28.000"	"0.769443539275377"	"14"	"0.00307"	"0.03375"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPLDTEVPLER"	"[K].gTPLDTEVPLER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"P52873"	"Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"778.43079"	"1555.85430"	"1555.85290"	"0.90"	"0.00070"	"6/106"	"6"	"106"	"176268.036560059"	"HCD"	"MS2"	"24.67285"	"11.8"	"100.000"	"81.3342"	"28036"	"28036"	"28014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.9"	""	"14.0"	""	"12.5"	""	"18.7"	""	"27.6"	"20.3"	""	"783"	"21"	"35.000"	"28.000"	"0.303201793839686"	"14"	"0.002189"	"0.02015"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVAMESFAK"	"[K].eAVAmESFAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"778.92200"	"1556.83672"	"1556.83945"	"-1.76"	"-0.00137"	"7/84"	"7"	"84"	"130652.126342773"	"HCD"	"MS2"	"29.74614"	"10.9"	"100.000"	"59.0718"	"19004"	"19004"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"10.6"	""	"11.2"	""	"28.2"	""	"20.7"	"21.7"	""	"815"	"14"	"36.000"	"29.000"	"1.66773718839979"	"21"	"0.002559"	"0.02554"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVAMESFAK"	"[K].eAVAmESFAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"778.92303"	"1556.83879"	"1556.83945"	"-0.42"	"-0.00033"	"9/84"	"9"	"84"	"253409.51574707"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"59.1430"	"19068"	"19068"	"19045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.6"	""	"18.5"	""	"17.9"	""	"48.9"	"0.6"	"47.1"	"40.6"	""	"816"	"10"	"36.000"	"29.000"	"3.71244615233959"	"15"	"0.002559"	"0.02557"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAVAMESFAK"	"[K].eAVAmESFAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"Q5XIM9"	"T-complex protein 1 subunit beta OS=Rattus norvegicus OX=10116 GN=Cct2 PE=1 SV=3"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"778.92462"	"1556.84197"	"1556.83945"	"1.62"	"0.00126"	"5/84"	"5"	"84"	"164866.553833008"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"58.8990"	"18969"	"18969"	"18942"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"10.1"	""	"14.8"	""	"28.3"	""	"25.1"	"22.9"	""	"826"	"17"	"36.000"	"29.000"	"0.84518163496729"	"24"	"0.002525"	"0.02418"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVDTLPQETR"	"[K].rLVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"519.63647"	"1556.89487"	"1556.89577"	"-0.58"	"-0.00030"	"8/112"	"8"	"112"	"3878220.38983154"	"HCD"	"MS2"	"38.22475"	"53.2"	"100.000"	"47.5541"	"14324"	"14324"	"14303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.9"	""	"60.9"	""	"73.0"	""	"86.5"	""	"111.2"	"106.6"	""	"797"	"40"	"36.000"	"29.000"	"0.00439975330030976"	"19"	"0"	"1.299E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLVDTLPQETR"	"[K].rLVDTLPQETR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"P17559"	"Uteroglobin OS=Rattus norvegicus OX=10116 GN=Scgb1a1 PE=1 SV=2"	"1"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"519.63647"	"1556.89487"	"1556.89577"	"-0.58"	"-0.00030"	"9/112"	"9"	"112"	"4749823.51098633"	"HCD"	"MS2"	"43.35178"	"62.0"	"100.000"	"47.1538"	"14199"	"14199"	"14177"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.5"	""	"69.4"	""	"72.4"	""	"108.5"	"0.5"	"134.6"	"130.7"	""	"797"	"41"	"36.000"	"29.000"	"0.00312196712642335"	"22"	"0"	"2.499E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4565"	"0.0000"	"1"	"1"	"1"	"778.95367"	"1556.90007"	"1556.90483"	"-3.05"	"-0.00238"	"8/84"	"8"	"84"	"323985.260192871"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"57.8450"	"18539"	"18539"	"18514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"30.8"	""	"34.6"	""	"48.2"	"0.6"	"61.3"	"45.4"	""	"763"	"47"	"35.000"	"28.000"	"0.000854072114363821"	""	"0.0001686"	"0.001199"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"778.95490"	"1556.90251"	"1556.90483"	"-1.49"	"-0.00116"	"9/88"	"9"	"88"	"462783.255859375"	"HCD"	"MS2"	"0"	"39.5"	"100.000"	"77.0029"	"26279"	"26279"	"26268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"67.9"	""	"45.3"	""	"69.9"	"0.2"	"61.2"	"64.6"	""	"780"	"59"	"35.000"	"28.000"	"4.8536069859084E-05"	"24"	"0"	"0.0002549"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"519.63904"	"1556.90256"	"1556.90483"	"-1.46"	"-0.00076"	"8/88"	"8"	"88"	"2318563.38433838"	"HCD"	"MS2"	"14.08329"	"59.5"	"100.000"	"76.8473"	"26218"	"26218"	"26200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.6"	""	"93.1"	""	"82.5"	""	"111.2"	""	"106.2"	"82.7"	""	"780"	"43"	"35.000"	"28.000"	"0.00189262515063227"	"25"	"0.0001991"	"0.005709"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.3000"	"0.0000"	"1"	"1"	"1"	"778.95496"	"1556.90264"	"1556.90483"	"-1.41"	"-0.00110"	"8/84"	"8"	"84"	"634692.08013916"	"HCD"	"MS2"	"8.508607"	"56.0"	"100.000"	"58.1995"	"18648"	"18648"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.5"	""	"69.3"	""	"64.0"	""	"89.1"	"2.9"	"93.8"	"107.8"	""	"780"	"50"	"35.000"	"28.000"	"0.000407440885496111"	""	"9.9E-05"	"0.0006874"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.2889"	"0.0000"	"1"	"1"	"1"	"778.95526"	"1556.90325"	"1556.90483"	"-1.02"	"-0.00079"	"8/84"	"8"	"84"	"1177227.52008057"	"HCD"	"MS2"	"6.265145"	"95.8"	"100.000"	"58.4939"	"18768"	"18768"	"18750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.7"	""	"115.7"	""	"120.3"	""	"155.8"	""	"174.8"	"182.2"	""	"774"	"45"	"35.000"	"28.000"	"0.00112127196844041"	""	"0"	"1.09E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"519.63934"	"1556.90348"	"1556.90483"	"-0.87"	"-0.00045"	"8/88"	"8"	"88"	"1076955.38861084"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"77.0539"	"26331"	"26331"	"26323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.2"	""	"50.1"	""	"41.6"	""	"57.8"	""	"52.7"	"49.8"	""	"777"	"44"	"35.000"	"28.000"	"0.00164964700593143"	"25"	"0.0009352"	"0.008355"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8406"	"0.0000"	"1"	"1"	"1"	"778.95544"	"1556.90361"	"1556.90483"	"-0.78"	"-0.00061"	"17/88"	"17"	"88"	"1829947.98571777"	"HCD"	"MS2"	"0"	"135.5"	"100.000"	"76.8577"	"26253"	"26253"	"26234"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.7"	""	"212.3"	""	"182.5"	""	"248.7"	"0.7"	"220.6"	"177.0"	""	"771"	"69"	"35.000"	"28.000"	"4.97765029978017E-06"	"28"	"0"	"5.976E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"778.95551"	"1556.90373"	"1556.90483"	"-0.70"	"-0.00055"	"6/88"	"6"	"88"	"260297.914001465"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"76.4170"	"26043"	"26043"	"26016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.7"	""	"35.5"	""	"30.7"	""	"34.1"	"1.2"	"40.6"	"29.2"	""	"770"	"36"	"35.000"	"28.000"	"0.00998759054415743"	"23"	"0.0001686"	"0.001513"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"519.63953"	"1556.90403"	"1556.90483"	"-0.52"	"-0.00027"	"11/84"	"11"	"84"	"2174858.32287598"	"HCD"	"MS2"	"6.735552"	"60.4"	"100.000"	"58.5353"	"18785"	"18785"	"18766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.9"	""	"67.8"	""	"79.6"	""	"95.9"	"0.5"	"112.9"	"120.8"	""	"769"	"34"	"35.000"	"28.000"	"0.0159917629734951"	""	"0"	"0.000273"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"778.95575"	"1556.90422"	"1556.90483"	"-0.39"	"-0.00030"	"8/84"	"8"	"84"	"1611860.331604"	"HCD"	"MS2"	"7.408477"	"127.8"	"100.000"	"58.1301"	"18655"	"18655"	"18638"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"211.4"	""	"140.2"	""	"156.6"	""	"222.7"	""	"240.8"	"240.0"	""	"768"	"50"	"35.000"	"28.000"	"0.000397494592004868"	""	"0"	"2.146E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"778.95575"	"1556.90422"	"1556.90483"	"-0.39"	"-0.00030"	"17/88"	"17"	"88"	"1866379.46417236"	"HCD"	"MS2"	"0"	"133.8"	"100.000"	"76.7302"	"26170"	"26170"	"26152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.7"	""	"227.1"	""	"178.6"	""	"233.3"	"1.5"	"225.3"	"171.8"	""	"768"	"66"	"35.000"	"28.000"	"8.69623414115734E-06"	"28"	"0"	"1.519E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"519.63977"	"1556.90476"	"1556.90483"	"-0.04"	"-0.00002"	"8/88"	"8"	"88"	"3359091.86419678"	"HCD"	"MS2"	"7.098459"	"84.2"	"100.000"	"76.7823"	"26222"	"26222"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.6"	""	"138.7"	""	"113.1"	""	"147.6"	""	"138.9"	"113.5"	""	"755"	"53"	"35.000"	"28.000"	"0.000182354697770014"	"26"	"0"	"0.0002293"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLGPDGDANLK"	"[R].vLGPDGDANLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"Q6P734"	"Plasma protease C1 inhibitor OS=Rattus norvegicus OX=10116 GN=Serping1 PE=2 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"778.95605"	"1556.90483"	"1556.90483"	"0.00"	"0.00000"	"15/88"	"15"	"88"	"500542.922119141"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"76.5586"	"26132"	"26132"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.5"	""	"61.5"	""	"52.0"	""	"76.5"	"1.2"	"65.3"	"50.1"	""	"755"	"51"	"35.000"	"28.000"	"0.000324277604368287"	"25"	"0.0001686"	"0.001431"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGPQEEQIK"	"[K].lGGPQEEQIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.5682"	"0.0000"	"1"	"1"	"1"	"519.63989"	"1556.90512"	"1556.90483"	"0.19"	"0.00010"	"8/84"	"8"	"84"	"3359224.67712402"	"HCD"	"MS2"	"14.60623"	"90.3"	"100.000"	"58.1350"	"18657"	"18657"	"18638"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.9"	""	"98.7"	""	"116.4"	""	"151.8"	""	"179.5"	"177.2"	""	"765"	"44"	"35.000"	"28.000"	"0.00168512235291257"	""	"0"	"0.0001403"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALLELEGK"	"[K].ePALLELEGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.7949"	"0.0000"	"1"	"1"	"1"	"778.96777"	"1556.92827"	"1556.92998"	"-1.10"	"-0.00086"	"12/86"	"12"	"86"	"207978.487304688"	"HCD"	"MS2"	"27.52526"	"16.6"	"100.000"	"105.2792"	"37706"	"37706"	"37695"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.5"	""	"18.5"	""	"20.8"	""	"29.6"	"1.4"	"34.8"	"29.3"	""	"612"	"39"	"34.000"	"27.000"	"0.00359518651811496"	"23"	"0"	"6.232E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALLELEGK"	"[K].ePALLELEGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"519.64777"	"1556.92875"	"1556.92998"	"-0.79"	"-0.00041"	"8/86"	"8"	"86"	"1545416.54779053"	"HCD"	"MS2"	"15.04148"	"36.2"	"100.000"	"105.5397"	"37810"	"37810"	"37793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"43.1"	""	"51.1"	""	"59.4"	""	"73.5"	"70.9"	""	"618"	"23"	"34.000"	"27.000"	"0.155223860162418"	"19"	"0.0001686"	"0.0016"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALLELEGK"	"[K].ePALLELEGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"778.96814"	"1556.92900"	"1556.92998"	"-0.63"	"-0.00049"	"16/86"	"16"	"86"	"727284.170227051"	"HCD"	"MS2"	"5.531583"	"50.7"	"100.000"	"105.5740"	"37824"	"37824"	"37806"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.3"	""	"54.7"	""	"60.0"	""	"86.2"	"1.3"	"104.9"	"100.9"	""	"618"	"55"	"34.000"	"27.000"	"0.000109637337273175"	"23"	"0"	"5.819E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALLELEGK"	"[K].ePALLELEGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"778.96838"	"1556.92949"	"1556.92998"	"-0.31"	"-0.00024"	"7/86"	"7"	"86"	"221674.101257324"	"HCD"	"MS2"	"25.63381"	"17.3"	"100.000"	"105.0156"	"37583"	"37583"	"37560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.0"	""	"18.3"	""	"23.0"	""	"30.3"	""	"30.2"	"36.9"	""	"609"	"20"	"34.000"	"27.000"	"0.327783657550285"	"16"	"0.002711"	"0.02869"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALLELEGK"	"[K].ePALLELEGk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.8772"	"0.0000"	"1"	"1"	"1"	"778.96851"	"1556.92974"	"1556.92998"	"-0.16"	"-0.00012"	"16/86"	"16"	"86"	"627422.498962402"	"HCD"	"MS2"	"8.52885"	"43.8"	"100.000"	"105.3241"	"37706"	"37706"	"37690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"51.6"	""	"58.9"	""	"63.2"	""	"89.4"	"95.4"	""	"609"	"57"	"34.000"	"27.000"	"6.57033172586987E-05"	"23"	"0"	"3.472E-06"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"YDGSDLVAMTTR"	"[K].yDGSDLVAMTTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"779.39191"	"1557.77654"	"1557.77802"	"-0.95"	"-0.00074"	"5/106"	"5"	"106"	"123112.292663574"	"HCD"	"MS2"	"30.07128"	"7.6"	"100.000"	"90.7904"	"31838"	"31838"	"31815"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.7"	""	"10.5"	""	"10.0"	""	"11.9"	""	"16.3"	"14.5"	""	"639"	"9"	"35.000"	"28.000"	"4.42049458081484"	"13"	"0.009166"	"0.1178"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].INVYYNEATGGk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"779.40759"	"1557.80791"	"1557.81104"	"-2.01"	"-0.00156"	"8/112"	"8"	"112"	"224901.216430664"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"55.4128"	"17522"	"17522"	"17496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.7"	""	"14.6"	""	"22.2"	""	"19.5"	""	"39.1"	"36.0"	""	"825"	"55"	"36.000"	"29.000"	"0.000121737380599988"	"25"	"0.0001686"	"0.001725"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].INVYYNEATGGk.[Y]"	"K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"779.40820"	"1557.80913"	"1557.81104"	"-1.23"	"-0.00095"	"9/112"	"9"	"112"	"213271.462585449"	"HCD"	"MS2"	"19.16294"	"15.3"	"100.000"	"55.0079"	"17391"	"17391"	"17364"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.6"	""	"22.8"	""	"18.2"	""	"22.6"	""	"28.9"	"29.5"	""	"825"	"64"	"36.000"	"29.000"	"1.79235467470773E-05"	"26"	"0"	"0.0003029"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPSENLVPSSAR"	"[R].aTPSENLVPSSAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.42523"	"1557.84319"	"1557.84340"	"-0.14"	"-0.00011"	"4/128"	"4"	"128"	"117477.796691895"	"HCD"	"MS2"	"100"	"6.7"	"100.000"	"49.2898"	"15065"	"15065"	"15035"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.6"	""	"7.9"	""	"6.7"	""	"10.3"	""	"15.6"	"14.9"	""	"902"	"5"	"36.000"	"29.000"	"15.1417664023572"	"13"	"0.004852"	"0.06021"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPSENLVPSSAR"	"[R].aTPSENLVPSSAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"Q5XI29"	"Cleavage and polyadenylation specificity factor subunit 7 OS=Rattus norvegicus OX=10116 GN=Cpsf7 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.42621"	"1557.84514"	"1557.84340"	"1.12"	"0.00087"	"7/128"	"7"	"128"	"107343.77911377"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"49.7052"	"15199"	"15199"	"15177"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.2"	""	"7.3"	""	"5.8"	""	"13.3"	""	"12.7"	"19.8"	""	"913"	"7"	"36.000"	"29.000"	"10.1962571972214"	"13"	"0.009444"	"0.1249"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPDIVAEQK"	"[R].lSPDIVAEQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.6571"	"0.0000"	"1"	"1"	"1"	"779.46552"	"1557.92375"	"1557.92523"	"-0.95"	"-0.00074"	"12/86"	"12"	"86"	"427166.3203125"	"HCD"	"MS2"	"45.72092"	"31.0"	"100.000"	"85.1669"	"29611"	"29611"	"29589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.5"	""	"32.0"	""	"41.4"	""	"57.2"	""	"63.6"	"57.9"	""	"651"	"35"	"35.000"	"28.000"	"0.0107783180042584"	"27"	"0.0001686"	"0.001341"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPDIVAEQK"	"[R].lSPDIVAEQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.5312"	"0.0000"	"1"	"1"	"1"	"779.46552"	"1557.92375"	"1557.92523"	"-0.95"	"-0.00074"	"7/86"	"7"	"86"	"535276.596252441"	"HCD"	"MS2"	"20.63012"	"38.4"	"100.000"	"85.2413"	"29612"	"29612"	"29591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.9"	""	"41.3"	""	"49.8"	""	"69.1"	""	"77.5"	"66.7"	""	"651"	"32"	"35.000"	"28.000"	"0.0183886985301405"	""	"0.0001991"	"0.002052"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPDIVAEQK"	"[R].lSPDIVAEQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"779.46564"	"1557.92400"	"1557.92523"	"-0.79"	"-0.00062"	"12/86"	"12"	"86"	"293020.550476074"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"85.4941"	"29744"	"29744"	"29724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.8"	""	"30.2"	""	"31.2"	""	"44.6"	""	"50.7"	"47.4"	""	"647"	"24"	"35.000"	"28.000"	"0.122708397638986"	"24"	"0.0001991"	"0.005443"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSPDIVAEQK"	"[R].lSPDIVAEQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"P05982"	"NAD(P)H dehydrogenase [quinone] 1 OS=Rattus norvegicus OX=10116 GN=Nqo1 PE=1 SV=4"	"0"	"2"	"2"	"0.4783"	"0.0000"	"1"	"1"	"1"	"779.46582"	"1557.92436"	"1557.92523"	"-0.56"	"-0.00043"	"11/86"	"11"	"86"	"223119.247131348"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"85.5525"	"29738"	"29738"	"29719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.0"	""	"19.1"	""	"24.6"	""	"33.4"	""	"44.1"	"35.4"	""	"646"	"23"	"35.000"	"28.000"	"0.171475675486609"	"26"	"0.002508"	"0.0234"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEELNMDLFR"	"[K].fEELNmDLFR.[S]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.89197"	"1558.77666"	"1558.77730"	"-0.41"	"-0.00032"	"5/92"	"5"	"92"	"207572.036010742"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"111.3836"	"40070"	"40070"	"40039"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.6"	""	"8.4"	""	"9.4"	""	"22.2"	""	"19.9"	"17.8"	""	"652"	"2"	"35.000"	"28.000"	"20.3806297844873"	"13"	"0.008868"	"0.1123"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDEAYMNK"	"[K].dVDEAYmNk.[V]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.89362"	"1558.77995"	"1558.78233"	"-1.52"	"-0.00119"	"5/72"	"5"	"72"	"156320.296081543"	"HCD"	"MS2"	"41.14183"	"13.1"	"100.000"	"47.3102"	"14225"	"14225"	"14196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"8.2"	""	"9.3"	""	"29.9"	""	"33.7"	"32.8"	""	"657"	"5"	"35.000"	"28.000"	"10.8276790450295"	"13"	"0.006033"	"0.07362"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGILINSQGER"	"[R].gEGGILINSQGER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"Q920L2"	"Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdha PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"779.92371"	"1558.84014"	"1558.83865"	"0.95"	"0.00074"	"5/126"	"5"	"126"	"116127.187744141"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"50.5829"	"15592"	"15592"	"15567"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"13.9"	""	"10.7"	""	"15.8"	""	"19.0"	"23.8"	""	"910"	"12"	"36.000"	"29.000"	"2.77978621332035"	"13"	"0.002673"	"0.02803"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPGPLAGHPQVSR"	"[K].gGPGPLAGHPQVSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"520.29150"	"1558.85996"	"1558.86514"	"-3.32"	"-0.00173"	"17/110"	"17"	"110"	"6558299.01922607"	"HCD"	"MS2"	"46.38167"	"224.3"	"100.000"	"31.9282"	"8030"	"8030"	"8011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"301.3"	""	"305.6"	""	"376.1"	""	"291.7"	""	"411.9"	"443.8"	""	"941"	"36"	"36.000"	"29.000"	"0.0110805068807307"	"15"	"0"	"1.672E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"520.29242"	"1558.86271"	"1558.86380"	"-0.70"	"-0.00037"	"18/110"	"18"	"110"	"3625263.38269043"	"HCD"	"MS2"	"7.477563"	"19.2"	"100.000"	"96.1289"	"33998"	"33998"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	"10.4"	"22.0"	""	"26.4"	""	"24.9"	""	"33.4"	"42.2"	""	"932"	"75"	"36.000"	"29.000"	"1.47362138963846E-06"	"29"	"0"	"4.363E-07"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8243"	"0.0000"	"1"	"1"	"1"	"520.29248"	"1558.86289"	"1558.86380"	"-0.59"	"-0.00030"	"18/110"	"18"	"110"	"2954059.16436768"	"HCD"	"MS2"	"8.890161"	"18.0"	"100.000"	"96.1723"	"34048"	"34048"	"34038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	"10.2"	"20.9"	""	"20.6"	""	"25.7"	""	"30.5"	"42.9"	""	"932"	"74"	"36.000"	"29.000"	"1.78807576399402E-06"	""	"0"	"1.158E-07"	"1.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"779.93530"	"1558.86333"	"1558.86380"	"-0.30"	"-0.00024"	"14/110"	"14"	"110"	"326251.785522461"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"95.7727"	"33886"	"33886"	"33864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"22.1"	""	"25.1"	""	"34.2"	""	"27.2"	"33.3"	""	"931"	"56"	"36.000"	"29.000"	"0.000115323996782829"	"20"	"0"	"2.196E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"779.93536"	"1558.86345"	"1558.86380"	"-0.23"	"-0.00018"	"12/110"	"12"	"110"	"2905081.97344971"	"HCD"	"MS2"	"0"	"116.2"	"100.000"	"96.0388"	"33962"	"33962"	"33945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"158.2"	""	"134.1"	""	"179.9"	""	"174.6"	"2.2"	"195.9"	"256.0"	""	"915"	"69"	"36.000"	"29.000"	"6.08682896224976E-06"	"24"	"0"	"4.784E-08"	"1.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"520.29272"	"1558.86362"	"1558.86380"	"-0.12"	"-0.00006"	"18/110"	"18"	"110"	"2561116.88885498"	"HCD"	"MS2"	"15.63854"	"14.7"	"100.000"	"95.8696"	"33925"	"33925"	"33906"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	"9.0"	"14.2"	""	"22.8"	""	"21.4"	""	"26.3"	"30.5"	""	"913"	"68"	"36.000"	"29.000"	"7.87844997693528E-06"	"27"	"0"	"7.782E-07"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.8551"	"0.0000"	"1"	"1"	"1"	"520.29272"	"1558.86362"	"1558.86380"	"-0.12"	"-0.00006"	"18/110"	"18"	"110"	"3604065.10839844"	"HCD"	"MS2"	"10.54317"	"20.7"	"100.000"	"95.8469"	"33883"	"33883"	"33866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	"8.1"	"26.9"	""	"27.6"	""	"33.5"	""	"31.7"	"46.9"	""	"913"	"69"	"36.000"	"29.000"	"5.24132128213326E-06"	"27"	"0"	"8.321E-07"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.8904"	"0.0000"	"1"	"1"	"1"	"779.93573"	"1558.86418"	"1558.86380"	"0.24"	"0.00019"	"12/110"	"12"	"110"	"2502077.79705811"	"HCD"	"MS2"	"0"	"99.7"	"100.000"	"96.0707"	"34007"	"34007"	"33990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.0"	""	"117.9"	""	"154.9"	""	"152.4"	""	"172.8"	"218.8"	""	"929"	"73"	"36.000"	"29.000"	"2.25416508325305E-06"	"25"	"0"	"1.128E-08"	"1.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALEGTVAEIEAR"	"[K].aALEGTVAEIEAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"779.93597"	"1558.86467"	"1558.86380"	"0.56"	"0.00043"	"5/110"	"5"	"110"	"239284.42590332"	"HCD"	"MS2"	"100"	"14.1"	"100.000"	"95.7222"	"33833"	"33833"	"33808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.0"	""	"14.8"	""	"25.1"	""	"19.8"	""	"26.6"	"30.7"	""	"928"	"19"	"36.000"	"29.000"	"0.636089139500491"	"18"	"0.0001991"	"0.00313"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.8039"	"0.0000"	"1"	"1"	"1"	"779.95752"	"1558.90776"	"1558.90924"	"-0.95"	"-0.00074"	"13/80"	"13"	"80"	"407299.827880859"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"75.6401"	"25727"	"25727"	"25707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.7"	""	"46.1"	""	"44.0"	""	"67.0"	""	"81.7"	"80.2"	""	"780"	"51"	"35.000"	"28.000"	"0.000335015273387104"	"26"	"0"	"0.0003855"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"779.95801"	"1558.90874"	"1558.90924"	"-0.32"	"-0.00025"	"11/80"	"11"	"80"	"195927.159545898"	"HCD"	"MS2"	"25.86279"	"16.4"	"100.000"	"75.4064"	"25663"	"25663"	"25635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"14.5"	""	"21.5"	""	"35.2"	""	"32.0"	"32.0"	""	"777"	"30"	"35.000"	"28.000"	"0.0361735409619252"	"24"	"0.0004582"	"0.006408"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"779.95856"	"1558.90984"	"1558.90924"	"0.38"	"0.00030"	"13/80"	"13"	"80"	"383345.782226563"	"HCD"	"MS2"	"13.19521"	"32.8"	"100.000"	"75.7795"	"25815"	"25815"	"25793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"38.6"	""	"38.4"	""	"54.9"	""	"71.8"	"70.2"	""	"772"	"44"	"35.000"	"28.000"	"0.00156887125057772"	"20"	"9.9E-05"	"0.0009114"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIVEPDTEIK"	"[K].gIVEPDTEIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"P97710"	"Tyrosine-protein phosphatase non-receptor type substrate 1 OS=Rattus norvegicus OX=10116 GN=Sirpa PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"779.95880"	"1558.91033"	"1558.90924"	"0.69"	"0.00054"	"12/80"	"12"	"80"	"275498.06628418"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"75.3246"	"25599"	"25599"	"25569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"26.6"	""	"27.2"	""	"43.4"	"0.5"	"48.4"	"43.9"	""	"749"	"34"	"35.000"	"28.000"	"0.0136286181029639"	"23"	"0.0001991"	"0.004182"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"520.61627"	"1559.83426"	"1559.83575"	"-0.95"	"-0.00049"	"9/70"	"9"	"70"	"1854736.53344727"	"HCD"	"MS2"	"16.12472"	"44.5"	"100.000"	"94.5324"	"33385"	"33385"	"33369"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.5"	""	"52.8"	""	"58.9"	""	"73.1"	""	"93.0"	"83.2"	""	"946"	"20"	"36.000"	"29.000"	"0.423507534104958"	"22"	"0.0001991"	"0.003396"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"780.42096"	"1559.83464"	"1559.83575"	"-0.71"	"-0.00055"	"8/70"	"8"	"70"	"871184.244812012"	"HCD"	"MS2"	"39.53997"	"61.5"	"100.000"	"94.7280"	"33464"	"33464"	"33447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.1"	""	"74.2"	""	"79.2"	""	"97.5"	"0.4"	"125.8"	"123.5"	""	"939"	"28"	"36.000"	"29.000"	"0.0761439840710018"	"15"	"0"	"0.0002639"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"780.42126"	"1559.83525"	"1559.83575"	"-0.32"	"-0.00025"	"8/70"	"8"	"70"	"803040.593383789"	"HCD"	"MS2"	"33.38829"	"60.8"	"100.000"	"94.7678"	"33445"	"33445"	"33427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.0"	""	"71.7"	""	"83.8"	""	"100.0"	""	"119.3"	"121.9"	""	"937"	"31"	"36.000"	"29.000"	"0.038433469851852"	"18"	"0"	"0.0001061"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"520.61664"	"1559.83536"	"1559.83575"	"-0.25"	"-0.00013"	"9/70"	"9"	"70"	"1758855.46496582"	"HCD"	"MS2"	"15.45321"	"45.5"	"100.000"	"94.6067"	"33381"	"33381"	"33367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.7"	""	"57.8"	""	"60.9"	""	"76.1"	""	"86.2"	"86.4"	""	"940"	"20"	"36.000"	"29.000"	"0.43062363035734"	"20"	"0.0003938"	"0.006307"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.42188"	"1559.83647"	"1559.83575"	"0.47"	"0.00036"	"8/70"	"8"	"70"	"2449086.54803467"	"HCD"	"MS2"	"61.90862"	"137.4"	"100.000"	"94.4663"	"33323"	"33323"	"33303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.2"	""	"178.6"	""	"170.1"	""	"236.3"	"3.7"	"270.1"	"242.2"	""	"928"	"21"	"36.000"	"29.000"	"0.350362793636761"	"14"	"9.9E-05"	"0.0009069"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DETEFYLGK"	"[R].dETEFYLGk.[R]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"P04646"	"60S ribosomal protein L35a OS=Rattus norvegicus OX=10116 GN=Rpl35a PE=3 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"780.42200"	"1559.83672"	"1559.83575"	"0.62"	"0.00049"	"8/70"	"8"	"70"	"2321093.36340332"	"HCD"	"MS2"	"59.69681"	"137.5"	"100.000"	"94.4264"	"33343"	"33343"	"33326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.3"	""	"175.2"	""	"166.0"	""	"241.4"	""	"291.1"	"232.2"	""	"927"	"21"	"36.000"	"29.000"	"0.393595150179332"	"15"	"9.9E-05"	"0.0008141"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLIPNASQPESK"	"[K].FLIPNASQPESk.[V]"	"K12(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"780.43555"	"1559.86382"	"1559.86307"	"0.48"	"0.00037"	"6/110"	"6"	"110"	"141512.686218262"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"72.1534"	"24341"	"24341"	"24313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"12.1"	""	"11.7"	""	"11.1"	""	"19.2"	"15.1"	""	"906"	"30"	"36.000"	"29.000"	"0.0497849645262932"	"19"	"0.002508"	"0.02339"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAALEDELTSLR"	"[K].iAALEDELTSLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"B0K035"	"Mitochondrial fission regulator 2 OS=Rattus norvegicus OX=10116 GN=Mtfr2 PE=2 SV=1"	"B0K035"	"Mitochondrial fission regulator 2 OS=Rattus norvegicus OX=10116 GN=Mtfr2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"780.45624"	"1559.90520"	"1559.88420"	"13.46"	"0.01050"	"6/98"	"6"	"98"	"283120.689147949"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"82.3674"	"28483"	"28483"	"28458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.3"	""	"28.9"	""	"32.5"	""	"57.2"	"0.9"	"62.6"	"64.7"	""	"893"	"16"	"36.000"	"29.000"	"1.22129748629595"	"14"	"0.007752"	"0.09901"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLVEEINTK"	"[K].gVLVEEINTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"780.47375"	"1559.94023"	"1559.94088"	"-0.41"	"-0.00032"	"10/84"	"10"	"84"	"129291.171813965"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"89.8429"	"31456"	"31456"	"31432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"17.1"	""	"13.3"	""	"22.4"	""	"23.5"	"20.5"	""	"797"	"38"	"36.000"	"29.000"	"0.00630127343649248"	"23"	"9.9E-05"	"0.0009022"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLVEEINTK"	"[K].gVLVEEINTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"780.47498"	"1559.94267"	"1559.94088"	"1.15"	"0.00090"	"5/84"	"5"	"84"	"150510.906982422"	"HCD"	"MS2"	"16.98165"	"12.0"	"100.000"	"90.0262"	"31569"	"31569"	"31555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.9"	""	"15.0"	""	"13.8"	""	"22.0"	""	"21.6"	"30.0"	""	"764"	"26"	"35.000"	"28.000"	"0.0879150774250051"	"15"	"0.001488"	"0.01245"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVLVEEINTK"	"[K].gVLVEEINTk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"780.47546"	"1559.94365"	"1559.94088"	"1.78"	"0.00139"	"13/84"	"13"	"84"	"136661.611206055"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"89.7425"	"31456"	"31456"	"31434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"18.7"	""	"12.6"	""	"17.9"	""	"28.5"	"26.9"	""	"763"	"51"	"35.000"	"28.000"	"0.000336120145052557"	"27"	"0"	"9.641E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVIEPMASEGLR"	"[R].nVIEPmASEGLR.[T]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"780.91565"	"1560.82402"	"1560.82531"	"-0.82"	"-0.00064"	"4/120"	"4"	"120"	"207285.115966797"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"55.0470"	"17407"	"17407"	"17378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"15.7"	""	"12.1"	""	"25.9"	""	"25.9"	"26.8"	""	"903"	"11"	"36.000"	"29.000"	"3.86952587121512"	"20"	"0.002419"	"0.02273"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAMPGEDLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"780.93750"	"1560.86772"	"1560.87075"	"-1.94"	"-0.00151"	"7/86"	"7"	"86"	"286153.584838867"	"HCD"	"MS2"	"18.58644"	"23.6"	"100.000"	"93.9670"	"33156"	"33156"	"33126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.2"	""	"36.5"	""	"35.5"	""	"28.8"	""	"36.3"	"45.1"	""	"985"	"30"	"36.000"	"29.000"	"0.0545012213609001"	"25"	"0.0001991"	"0.003502"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAMPGEDLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.7755"	"0.0000"	"1"	"1"	"1"	"780.93890"	"1560.87053"	"1560.87075"	"-0.14"	"-0.00011"	"9/86"	"9"	"86"	"614741.507629395"	"HCD"	"MS2"	"10.7596"	"46.8"	"100.000"	"94.1013"	"33175"	"33175"	"33147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.5"	""	"76.2"	""	"73.1"	""	"49.3"	"0.9"	"81.2"	"74.8"	""	"1015"	"49"	"37.000"	"30.000"	"0.000628689267664162"	"27"	"9.9E-05"	"0.0004086"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAMPGEDLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"780.93958"	"1560.87187"	"1560.87075"	"0.72"	"0.00056"	"12/86"	"12"	"86"	"1016036.29730225"	"HCD"	"MS2"	"5.233899"	"73.3"	"100.000"	"94.2788"	"33282"	"33282"	"33262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.4"	""	"100.4"	""	"112.5"	""	"102.8"	""	"125.1"	"140.7"	""	"1015"	"36"	"37.000"	"30.000"	"0.013441138203429"	"24"	"0.0001991"	"0.003112"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDEMPEAAVK"	"[R].iDEMPEAAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"780.93970"	"1560.87212"	"1560.87075"	"0.88"	"0.00068"	"9/80"	"9"	"80"	"369258.778320313"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"85.5937"	"29755"	"29755"	"29734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.6"	""	"46.8"	""	"42.0"	""	"39.6"	""	"58.3"	"58.5"	""	"1017"	"50"	"37.000"	"30.000"	"0.000471292965188399"	"27"	"0"	"0.0001447"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLNENAVEK"	"[K].wLNENAVEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"780.94238"	"1560.87749"	"1560.87861"	"-0.72"	"-0.00056"	"16/84"	"16"	"84"	"516206.068908691"	"HCD"	"MS2"	"0"	"47.7"	"100.000"	"87.2707"	"30423"	"30423"	"30411"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"60.5"	""	"66.8"	""	"71.5"	"1.4"	"80.3"	"79.3"	""	"978"	"56"	"36.000"	"29.000"	"0.000133754640716398"	"23"	"0"	"3.421E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLNENAVEK"	"[K].wLNENAVEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"780.94263"	"1560.87798"	"1560.87861"	"-0.41"	"-0.00032"	"8/84"	"8"	"84"	"374417.351013184"	"HCD"	"MS2"	"0"	"36.1"	"100.000"	"87.2794"	"30461"	"30461"	"30444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.0"	""	"41.5"	""	"54.0"	""	"56.1"	"0.4"	"66.5"	"67.3"	""	"977"	"49"	"36.000"	"29.000"	"0.000571300452513207"	"24"	"0"	"1.732E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLNENAVEK"	"[K].wLNENAVEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"780.94263"	"1560.87798"	"1560.87861"	"-0.41"	"-0.00032"	"8/84"	"8"	"84"	"302607.96496582"	"HCD"	"MS2"	"12.91969"	"28.4"	"100.000"	"86.9802"	"30306"	"30306"	"30291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.0"	""	"33.0"	""	"37.6"	""	"45.5"	""	"49.9"	"49.6"	""	"977"	"50"	"36.000"	"29.000"	"0.000538101952710981"	"29"	"0"	"8.197E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLNENAVEK"	"[K].wLNENAVEk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"780.94275"	"1560.87822"	"1560.87861"	"-0.25"	"-0.00020"	"8/84"	"8"	"84"	"372235.887512207"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"86.9676"	"30336"	"30336"	"30315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"42.9"	""	"46.2"	""	"58.5"	""	"58.6"	"68.0"	""	"983"	"52"	"36.000"	"29.000"	"0.000342391931685443"	"21"	"0"	"9.395E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASLLEPTDK"	"[K].eASLLEPTDk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"780.94745"	"1560.88762"	"1560.88851"	"-0.57"	"-0.00044"	"6/88"	"6"	"88"	"264817.294799805"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"73.4464"	"24837"	"24837"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"17.9"	""	"20.9"	""	"44.9"	"1.2"	"39.1"	"36.6"	""	"1033"	"24"	"37.000"	"30.000"	"0.216805515231355"	"20"	"0.0001991"	"0.003073"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EASLLEPTDK"	"[K].eASLLEPTDk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"P19332"	"Microtubule-associated protein tau OS=Rattus norvegicus OX=10116 GN=Mapt PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"780.94763"	"1560.88799"	"1560.88851"	"-0.33"	"-0.00026"	"7/88"	"7"	"88"	"275490.631774902"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"73.3830"	"24840"	"24840"	"24819"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"13.4"	""	"18.4"	""	"52.6"	"0.7"	"56.3"	"48.4"	""	"1030"	"44"	"37.000"	"30.000"	"0.00206922267587204"	"27"	"0"	"0.0003393"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQSEVEGVK"	"[R].nLQSEVEGVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"780.95245"	"1560.89763"	"1560.89974"	"-1.35"	"-0.00106"	"8/96"	"8"	"96"	"256908.13470459"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"70.6903"	"23752"	"23752"	"23730"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.1"	""	"26.9"	""	"31.0"	""	"45.1"	""	"51.5"	"53.2"	""	"988"	"32"	"36.000"	"29.000"	"0.0345721946025123"	"27"	"0.0001686"	"0.001438"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVTQIDNDLK"	"[K].gVTQIDNDLk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"0.6739"	"0.0000"	"1"	"1"	"1"	"780.95325"	"1560.89922"	"1560.89974"	"-0.34"	"-0.00026"	"9/94"	"9"	"94"	"709804.072387695"	"HCD"	"MS2"	"0"	"59.2"	"100.000"	"71.0614"	"23901"	"23901"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.0"	""	"64.2"	""	"77.6"	""	"103.3"	"2.4"	"113.8"	"117.6"	""	"975"	"46"	"36.000"	"29.000"	"0.00113494448811169"	""	"0"	"2.878E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQSEVEGVK"	"[R].nLQSEVEGVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"780.95337"	"1560.89946"	"1560.89974"	"-0.18"	"-0.00014"	"13/96"	"13"	"96"	"222937.03692627"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"70.5113"	"23646"	"23646"	"23623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"18.2"	""	"18.2"	""	"44.0"	""	"42.5"	"38.7"	""	"946"	"36"	"36.000"	"29.000"	"0.0131480437565014"	"24"	"0.001316"	"0.01041"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQSEVEGVK"	"[R].nLQSEVEGVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.6949"	"0.0000"	"1"	"1"	"1"	"780.95392"	"1560.90056"	"1560.89974"	"0.52"	"0.00041"	"9/96"	"9"	"96"	"574775.82989502"	"HCD"	"MS2"	"4.991833"	"47.7"	"100.000"	"70.3678"	"23621"	"23621"	"23604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.8"	""	"39.8"	""	"42.0"	""	"105.2"	""	"125.6"	"95.0"	""	"962"	"59"	"36.000"	"29.000"	"6.02760905146821E-05"	""	"0"	"2.112E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQSEVEGVK"	"[R].nLQSEVEGVk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"2"	"2"	"0.7903"	"0.0000"	"1"	"1"	"1"	"780.95477"	"1560.90227"	"1560.89974"	"1.62"	"0.00126"	"9/96"	"9"	"96"	"485134.655212402"	"HCD"	"MS2"	"9.384057"	"40.6"	"100.000"	"70.1724"	"23509"	"23509"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"35.5"	""	"38.2"	""	"90.3"	"0.6"	"96.7"	"85.7"	""	"939"	"62"	"36.000"	"29.000"	"2.71416094256984E-05"	"29"	"0"	"9.373E-07"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQIDQAIVK"	"[R].sTQIDQAIVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.6333"	"0.0000"	"1"	"1"	"1"	"780.97156"	"1560.93584"	"1560.93613"	"-0.19"	"-0.00014"	"9/94"	"9"	"94"	"178592.760192871"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"68.2467"	"22726"	"22726"	"22700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"15.9"	""	"21.2"	""	"32.2"	""	"34.6"	"36.9"	""	"723"	"60"	"35.000"	"28.000"	"3.25168375723108E-05"	""	"0"	"2.003E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STQIDQAIVK"	"[R].sTQIDQAIVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"780.97198"	"1560.93669"	"1560.93613"	"0.36"	"0.00028"	"7/94"	"7"	"94"	"163433.903991699"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"68.4873"	"22857"	"22857"	"22826"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"20.8"	""	"19.9"	""	"19.2"	""	"26.8"	"32.6"	""	"744"	"38"	"35.000"	"28.000"	"0.00552768058930766"	""	"0.0005161"	"0.006985"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHSNPNYDK"	"[R].eHSNPNYDk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"521.27124"	"1561.79917"	"1561.80109"	"-1.23"	"-0.00064"	"9/88"	"9"	"88"	"617691.138244629"	"HCD"	"MS2"	"22.79236"	"25.8"	"100.000"	"23.4627"	"4612"	"4612"	"4600"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.0"	""	"34.8"	""	"30.7"	""	"39.9"	""	"51.6"	"47.6"	""	"804"	"23"	"36.000"	"29.000"	"0.208077946444128"	"17"	"0.0001991"	"0.004485"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHSNPNYDK"	"[R].eHSNPNYDk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"521.27148"	"1561.79990"	"1561.80109"	"-0.76"	"-0.00040"	"9/88"	"9"	"88"	"714707.749938965"	"HCD"	"MS2"	"18.96338"	"28.8"	"100.000"	"23.2830"	"4580"	"4580"	"4570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.7"	""	"34.4"	""	"41.3"	""	"46.8"	""	"57.0"	"52.4"	""	"814"	"22"	"36.000"	"29.000"	"0.270143429653577"	"20"	"0.0001991"	"0.003966"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFDDLPLAEQR"	"[R].eFDDLPLAEQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"781.40649"	"1561.80571"	"1561.80595"	"-0.15"	"-0.00012"	"6/98"	"6"	"98"	"118374.429626465"	"HCD"	"MS2"	"18.18607"	"11.0"	"100.000"	"95.0720"	"33569"	"33569"	"33546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.4"	""	"10.3"	""	"11.0"	""	"11.1"	""	"17.5"	"40.4"	""	"827"	"16"	"36.000"	"29.000"	"1.06530879842056"	"13"	"0.002189"	"0.02133"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFDDLPLAEQR"	"[R].eFDDLPLAEQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"Q64578"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"781.40698"	"1561.80669"	"1561.80595"	"0.47"	"0.00037"	"8/98"	"8"	"98"	"147417.910095215"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"95.1200"	"33622"	"33622"	"33591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"11.0"	""	"9.0"	""	"14.4"	""	"13.5"	"57.0"	""	"826"	"12"	"36.000"	"29.000"	"2.8506903898602"	"13"	"0.004998"	"0.06373"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"781.41370"	"1561.82012"	"1561.82056"	"-0.28"	"-0.00022"	"9/104"	"9"	"104"	"869959.445373535"	"HCD"	"MS2"	"0"	"49.4"	"100.000"	"64.2817"	"21117"	"21117"	"21101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.7"	""	"45.9"	""	"73.9"	""	"62.1"	"1.6"	"98.8"	"104.6"	""	"913"	"54"	"36.000"	"29.000"	"0.000198811170337462"	"23"	"0"	"5.336E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"781.41406"	"1561.82085"	"1561.82056"	"0.19"	"0.00015"	"5/104"	"5"	"104"	"113865.609008789"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"64.6157"	"21287"	"21287"	"21259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"13.8"	""	"12.0"	""	"15.6"	""	"26.8"	"22.8"	""	"915"	"15"	"36.000"	"29.000"	"1.54308943711433"	"23"	"0.001217"	"0.009319"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"781.41406"	"1561.82085"	"1561.82056"	"0.19"	"0.00015"	"9/104"	"9"	"104"	"462530.038085938"	"HCD"	"MS2"	"0"	"28.5"	"100.000"	"63.9870"	"21032"	"21032"	"21009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"28.9"	""	"35.7"	""	"46.4"	""	"56.4"	"65.2"	""	"915"	"49"	"36.000"	"29.000"	"0.000518073166180267"	"21"	"0"	"6.243E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"781.41412"	"1561.82097"	"1561.82056"	"0.26"	"0.00021"	"9/104"	"9"	"104"	"824381.565673828"	"HCD"	"MS2"	"0"	"49.2"	"100.000"	"64.3010"	"21158"	"21158"	"21137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"78.4"	""	"47.8"	""	"58.6"	""	"65.3"	""	"107.4"	"110.4"	""	"919"	"51"	"36.000"	"29.000"	"0.000333645687441454"	"22"	"0"	"2.4E-06"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"781.41461"	"1561.82195"	"1561.82056"	"0.89"	"0.00069"	"7/104"	"7"	"104"	"155778.757080078"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"64.5963"	"21245"	"21245"	"21217"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.8"	""	"14.4"	""	"18.7"	""	"16.4"	""	"20.1"	"27.2"	""	"914"	"36"	"36.000"	"29.000"	"0.0123570897239774"	"19"	"0.0001686"	"0.001473"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADQIETQQLMR"	"[K].aDQIETQQLMR.[V]"	"N-Term(TMT6plex)"	"2"	"2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1;EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q641Z6; Q8R491"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1; EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"781.41479"	"1561.82231"	"1561.82056"	"1.12"	"0.00088"	"8/104"	"8"	"104"	"410655.259643555"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"63.9860"	"20999"	"20999"	"20984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"28.0"	""	"34.7"	""	"35.2"	""	"55.7"	"56.9"	""	"913"	"41"	"36.000"	"29.000"	"0.0033223148077106"	"22"	"0"	"1.748E-05"	"0.81"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGRPGIGATHSSR"	"[K].hGRPGIGATHSSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"391.21774"	"1561.84914"	"1561.85089"	"-1.12"	"-0.00044"	"9/122"	"9"	"122"	"2509933.06085205"	"HCD"	"MS2"	"17.58325"	"98.9"	"100.000"	"18.5909"	"2738"	"2738"	"2720"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.2"	""	"149.3"	""	"159.1"	""	"155.4"	"6.4"	"149.6"	"161.5"	""	"1033"	"29"	"37.000"	"30.000"	"0.0666914754821391"	"14"	"0"	"0.0002106"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGRPGIGATHSSR"	"[K].hGRPGIGATHSSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"P62845"	"40S ribosomal protein S15 OS=Rattus norvegicus OX=10116 GN=Rps15 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"391.21777"	"1561.84926"	"1561.85089"	"-1.04"	"-0.00041"	"7/122"	"7"	"122"	"2287039.0357666"	"HCD"	"MS2"	"9.364657"	"99.7"	"100.000"	"18.5826"	"2774"	"2774"	"2757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.0"	""	"143.3"	""	"178.6"	""	"172.2"	"8.8"	"146.0"	"154.0"	""	"1025"	"15"	"37.000"	"30.000"	"1.81006374518378"	"13"	"0.001999"	"0.01736"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSEAETLYK"	"[K].ySEAETLYk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"Q5PQM2"	"Kinesin light chain 4 OS=Rattus norvegicus OX=10116 GN=Klc4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"781.43018"	"1561.85307"	"1561.85140"	"1.08"	"0.00084"	"10/72"	"10"	"72"	"195709.465332031"	"HCD"	"MS2"	"18.43312"	"19.9"	"100.000"	"72.6706"	"24550"	"24550"	"24526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"22.2"	""	"26.6"	""	"32.4"	""	"40.6"	"36.2"	""	"1085"	"25"	"37.000"	"30.000"	"0.170372596642785"	"14"	"0.006845"	"0.08534"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"781.44391"	"1561.88054"	"1561.88376"	"-2.06"	"-0.00161"	"7/94"	"7"	"94"	"302371.250549316"	"HCD"	"MS2"	"100"	"27.1"	"100.000"	"73.9659"	"25078"	"25078"	"25051"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.3"	""	"26.1"	""	"27.7"	""	"52.0"	""	"55.1"	"67.6"	""	"1068"	"22"	"37.000"	"30.000"	"0.375440618817967"	"25"	"0.0001991"	"0.004646"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"781.44452"	"1561.88176"	"1561.88376"	"-1.28"	"-0.00100"	"9/94"	"9"	"94"	"428418.491760254"	"HCD"	"MS2"	"48.90967"	"36.9"	"100.000"	"73.8588"	"25005"	"25005"	"24977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"36.1"	""	"37.6"	""	"72.1"	"0.4"	"77.8"	"79.1"	""	"1055"	"60"	"37.000"	"30.000"	"4.93426493112834E-05"	"30"	"0"	"9.959E-07"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"781.44531"	"1561.88335"	"1561.88376"	"-0.26"	"-0.00020"	"18/94"	"18"	"94"	"3415730.46691895"	"HCD"	"MS2"	"2.058182"	"258.3"	"100.000"	"74.1585"	"25127"	"25127"	"25110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.9"	""	"263.2"	""	"213.7"	""	"524.6"	"2.8"	"581.9"	"627.5"	""	"1060"	"70"	"37.000"	"30.000"	"4.90090032187257E-06"	""	"0"	"6.148E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"781.44550"	"1561.88371"	"1561.88376"	"-0.03"	"-0.00002"	"18/94"	"18"	"94"	"1277217.10906982"	"HCD"	"MS2"	"0"	"111.2"	"100.000"	"74.4278"	"25235"	"25235"	"25224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.7"	""	"117.0"	""	"107.4"	""	"201.9"	"0.1"	"260.1"	"275.0"	""	"1044"	"70"	"37.000"	"30.000"	"4.93935798232944E-06"	""	"0"	"3.982E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7442"	"0.0000"	"1"	"1"	"1"	"521.29950"	"1561.88395"	"1561.88376"	"0.12"	"0.00006"	"7/94"	"7"	"94"	"5534580.12268066"	"HCD"	"MS2"	"4.638315"	"152.8"	"100.000"	"74.2355"	"25187"	"25187"	"25174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"193.6"	""	"177.1"	""	"158.2"	""	"292.0"	"5.1"	"311.0"	"314.7"	""	"1067"	"43"	"37.000"	"30.000"	"0.00239957552585569"	"26"	"9.9E-05"	"0.0005374"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"521.29956"	"1561.88413"	"1561.88376"	"0.24"	"0.00012"	"7/94"	"7"	"94"	"4314178.57330322"	"HCD"	"MS2"	"5.887386"	"114.0"	"100.000"	"74.0915"	"25099"	"25099"	"25081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.3"	""	"127.7"	""	"115.7"	""	"208.2"	""	"248.0"	"250.2"	""	"1071"	"42"	"37.000"	"30.000"	"0.00345747839648058"	"25"	"9.9E-05"	"0.0004993"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"781.44580"	"1561.88432"	"1561.88376"	"0.36"	"0.00028"	"9/94"	"9"	"94"	"1184352.91534424"	"HCD"	"MS2"	"1.037416"	"102.4"	"100.000"	"74.5672"	"25322"	"25322"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.5"	""	"97.7"	""	"87.1"	""	"193.3"	"0.3"	"234.4"	"267.3"	""	"1067"	"66"	"37.000"	"30.000"	"1.33086628682407E-05"	""	"0"	"5.703E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"781.44580"	"1561.88432"	"1561.88376"	"0.36"	"0.00028"	"18/94"	"18"	"94"	"3096751.85668945"	"HCD"	"MS2"	"1.269864"	"245.5"	"100.000"	"74.2746"	"25203"	"25203"	"25185"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"224.9"	""	"234.5"	""	"210.6"	""	"473.6"	""	"597.1"	"600.2"	""	"1067"	"63"	"37.000"	"30.000"	"2.6738338914015E-05"	"30"	"0"	"3.498E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLEDNSALDK"	"[R].vLEDNSALDk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"521.29980"	"1561.88486"	"1561.88376"	"0.71"	"0.00037"	"7/94"	"7"	"94"	"3621756.6630249"	"HCD"	"MS2"	"25.39477"	"109.8"	"100.000"	"74.5649"	"25321"	"25321"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.0"	""	"140.7"	""	"132.9"	""	"194.2"	""	"210.3"	"218.2"	""	"1052"	"23"	"37.000"	"30.000"	"0.243212417256011"	"17"	"0.0001991"	"0.004673"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLATLDVTK"	"[R].qDLATLDVTk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"781.46381"	"1561.92034"	"1561.92014"	"0.12"	"0.00010"	"13/104"	"13"	"104"	"221547.328063965"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"88.7173"	"31044"	"31044"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"25.5"	""	"25.6"	""	"32.7"	"1.4"	"37.2"	"35.9"	""	"888"	"49"	"36.000"	"29.000"	"0.000619987552308836"	"25"	"0"	"0.0003828"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLATLDVTK"	"[R].qDLATLDVTk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"P81795; C9WPN6"	"Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3 PE=1 SV=2; Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Rattus norvegicus OX=10116 GN=Eif2s3y PE=2 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"781.46387"	"1561.92046"	"1561.92014"	"0.20"	"0.00016"	"13/104"	"13"	"104"	"185016.212463379"	"HCD"	"MS2"	"7.479916"	"17.2"	"100.000"	"89.0094"	"31123"	"31123"	"31105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.1"	""	"20.1"	""	"18.7"	""	"32.6"	""	"34.9"	"30.9"	""	"904"	"42"	"36.000"	"29.000"	"0.00307000041942967"	"20"	"9.9E-05"	"0.0004296"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIAEVEGTGVK"	"[R].tIAEVEGTGVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B0BNL6"	"Arrestin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Arrdc1 PE=1 SV=1"	"B0BNL6"	"Arrestin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Arrdc1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"781.46393"	"1561.92058"	"1561.92014"	"0.28"	"0.00022"	"9/94"	"9"	"94"	"154171.850524902"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"68.8285"	"22996"	"22996"	"22970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"12.4"	""	"23.5"	""	"20.4"	""	"28.2"	"24.6"	""	"904"	"20"	"36.000"	"29.000"	"0.405637815114338"	"17"	"0.007412"	"0.09397"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDATEYIHR"	"[K].sLEDATEYIHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"521.60486"	"1562.80002"	"1562.80120"	"-0.76"	"-0.00039"	"13/92"	"13"	"92"	"1261276.71582031"	"HCD"	"MS2"	"17.89296"	"17.7"	"100.000"	"71.4761"	"24069"	"24069"	"24050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.4"	""	"22.2"	""	"26.7"	""	"26.3"	""	"34.3"	"36.6"	""	"849"	"57"	"36.000"	"29.000"	"8.93053947680868E-05"	"21"	"0"	"5.861E-07"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDATEYIHR"	"[K].sLEDATEYIHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"521.60516"	"1562.80094"	"1562.80120"	"-0.17"	"-0.00009"	"15/92"	"15"	"92"	"1113231.53955078"	"HCD"	"MS2"	"10.14465"	"15.0"	"100.000"	"71.4143"	"24013"	"24013"	"23990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"15.9"	""	"25.5"	""	"28.7"	""	"22.7"	"29.5"	""	"846"	"57"	"36.000"	"29.000"	"7.94951013507783E-05"	"22"	"0"	"5.708E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEQYYAMK"	"[K].aTEQYYAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"781.91669"	"1562.82610"	"1562.82889"	"-1.78"	"-0.00139"	"14/76"	"14"	"76"	"315236.05670166"	"HCD"	"MS2"	"22.75195"	"32.7"	"100.000"	"62.0460"	"20210"	"20210"	"20183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.4"	""	"49.2"	""	"47.8"	""	"42.1"	"0.9"	"57.3"	"56.6"	""	"998"	"44"	"36.000"	"29.000"	"0.00191469915500647"	"15"	"0"	"0.0001465"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEQYYAMK"	"[K].aTEQYYAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"781.91779"	"1562.82829"	"1562.82889"	"-0.38"	"-0.00030"	"8/76"	"8"	"76"	"383687.90423584"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"62.3598"	"20337"	"20337"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.2"	""	"52.7"	""	"57.8"	""	"49.3"	""	"73.6"	"71.0"	""	"1017"	"49"	"37.000"	"30.000"	"0.000585181997778246"	"23"	"0"	"9.256E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEQYYAMK"	"[K].aTEQYYAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"781.91797"	"1562.82866"	"1562.82889"	"-0.14"	"-0.00011"	"13/76"	"13"	"76"	"310886.485961914"	"HCD"	"MS2"	"18.25062"	"29.9"	"100.000"	"61.9799"	"20216"	"20216"	"20193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.5"	""	"38.3"	""	"42.8"	""	"39.9"	"1.3"	"58.4"	"49.4"	""	"996"	"36"	"36.000"	"29.000"	"0.0115140826550745"	"16"	"9.9E-05"	"0.0004363"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEQYYAMK"	"[K].aTEQYYAMk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"781.91907"	"1562.83086"	"1562.82889"	"1.26"	"0.00099"	"8/76"	"8"	"76"	"324098.408447266"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"62.3097"	"20350"	"20350"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"53.7"	""	"53.3"	""	"44.1"	""	"65.5"	"64.4"	""	"1009"	"51"	"37.000"	"30.000"	"0.000367164911388827"	"23"	"0"	"6.092E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEDQGLTK"	"[R].eGQEDQGLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1;Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"781.92389"	"1562.84050"	"1562.84262"	"-1.36"	"-0.00106"	"9/102"	"9"	"102"	"261231.943786621"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"38.5716"	"10720"	"10720"	"10692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.2"	""	"38.2"	""	"34.8"	""	"40.4"	""	"46.5"	"45.5"	""	"1060"	"28"	"37.000"	"30.000"	"0.0931699515398107"	"24"	"0.0001991"	"0.005772"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGQEDQGLTK"	"[R].eGQEDQGLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1;Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"Q00438; Q9Z118"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1; Polypyrimidine tract-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Ptbp3 PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"781.92523"	"1562.84319"	"1562.84262"	"0.36"	"0.00028"	"8/102"	"8"	"102"	"349611.645263672"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"38.6844"	"10730"	"10730"	"10702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.7"	""	"32.2"	""	"38.9"	""	"50.0"	"0.7"	"64.3"	"54.2"	""	"1069"	"52"	"37.000"	"30.000"	"0.000325048158183475"	"28"	"0"	"6.849E-06"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTDEDVDALK"	"[R].vTDEDVDALk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"781.93842"	"1562.86955"	"1562.86777"	"1.14"	"0.00089"	"5/82"	"5"	"82"	"163950.102844238"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"79.6728"	"27361"	"27361"	"27339"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"14.4"	""	"14.4"	""	"25.0"	""	"34.8"	"39.9"	""	"1078"	"30"	"37.000"	"30.000"	"0.0599223401004778"	"20"	"0.002834"	"0.02981"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"521.63916"	"1562.90293"	"1562.90416"	"-0.79"	"-0.00041"	"7/80"	"7"	"80"	"1065709.75762939"	"HCD"	"MS2"	"52.1363"	"36.1"	"100.000"	"76.3710"	"26024"	"26024"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.1"	""	"49.4"	""	"52.2"	""	"52.0"	""	"65.9"	"63.7"	""	"930"	"29"	"36.000"	"29.000"	"0.063453115851385"	"23"	"0.0001991"	"0.004699"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"781.95538"	"1562.90349"	"1562.90416"	"-0.43"	"-0.00033"	"9/80"	"9"	"80"	"588296.963378906"	"HCD"	"MS2"	"0"	"50.0"	"100.000"	"76.4618"	"26092"	"26092"	"26074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.5"	""	"71.4"	""	"81.4"	""	"75.1"	"1.1"	"83.4"	"76.1"	""	"933"	"64"	"36.000"	"29.000"	"1.6898635876139E-05"	"25"	"0"	"1.358E-06"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"521.63953"	"1562.90403"	"1562.90416"	"-0.09"	"-0.00004"	"7/80"	"7"	"80"	"1304875.68731689"	"HCD"	"MS2"	"25.48542"	"45.6"	"100.000"	"76.5125"	"26113"	"26113"	"26090"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.6"	""	"72.6"	""	"67.6"	""	"74.2"	"0.1"	"71.9"	"76.0"	""	"927"	"21"	"36.000"	"29.000"	"0.357313757911364"	"19"	"0.0001686"	"0.001029"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"781.95575"	"1562.90422"	"1562.90416"	"0.04"	"0.00003"	"18/80"	"18"	"80"	"1542717.7442627"	"HCD"	"MS2"	"1.320358"	"121.9"	"100.000"	"76.6544"	"26139"	"26139"	"26120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"216.7"	""	"180.2"	""	"209.8"	""	"160.6"	""	"177.6"	"206.9"	""	"941"	"66"	"36.000"	"29.000"	"1.2205613898769E-05"	"25"	"0"	"6.591E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"521.63965"	"1562.90439"	"1562.90416"	"0.15"	"0.00008"	"7/80"	"7"	"80"	"1711983.66912842"	"HCD"	"MS2"	"0"	"52.1"	"100.000"	"76.7028"	"26159"	"26159"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	""	"80.4"	""	"79.1"	""	"75.4"	"0.9"	"88.7"	"92.7"	""	"951"	"40"	"36.000"	"29.000"	"0.00522577276650163"	"25"	"0.0001686"	"0.001262"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.8507"	"0.0000"	"1"	"1"	"1"	"781.95612"	"1562.90495"	"1562.90416"	"0.51"	"0.00040"	"9/80"	"9"	"80"	"1822496.14837646"	"HCD"	"MS2"	"0"	"141.9"	"100.000"	"76.7497"	"26209"	"26209"	"26192"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"224.1"	""	"210.9"	""	"224.6"	""	"221.7"	""	"228.2"	"233.0"	""	"969"	"67"	"36.000"	"29.000"	"1.05025263878514E-05"	"27"	"0"	"5.253E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETTEDLVAK"	"[K].vETTEDLVAk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"781.95636"	"1562.90544"	"1562.90416"	"0.82"	"0.00064"	"16/80"	"16"	"80"	"389245.309692383"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"76.3295"	"26007"	"26007"	"25984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.2"	""	"51.0"	""	"56.4"	""	"54.1"	"0.2"	"50.6"	"54.2"	""	"916"	"58"	"36.000"	"29.000"	"7.34286388936038E-05"	"29"	"0"	"3.183E-06"	"0.962"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"782.40082"	"1563.79436"	"1563.79645"	"-1.34"	"-0.00105"	"9/102"	"9"	"102"	"294945.97052002"	"HCD"	"MS2"	"100"	"23.1"	"100.000"	"51.7302"	"16054"	"16054"	"16029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.3"	""	"23.3"	""	"31.7"	""	"42.1"	""	"44.6"	"40.5"	""	"871"	"5"	"36.000"	"29.000"	"15.1351998308516"	"15"	"0.002419"	"0.0229"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9722"	"0.0000"	"1"	"1"	"1"	"782.40125"	"1563.79521"	"1563.79645"	"-0.79"	"-0.00062"	"8/102"	"8"	"102"	"548191.123413086"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"52.1410"	"16187"	"16187"	"16163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"45.2"	""	"43.9"	""	"64.4"	"2.3"	"49.2"	"55.5"	""	"887"	"36"	"36.000"	"29.000"	"0.0100436975041752"	"16"	"0"	"4.003E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"782.40131"	"1563.79534"	"1563.79645"	"-0.71"	"-0.00056"	"8/102"	"8"	"102"	"1073494.88897705"	"HCD"	"MS2"	"8.870551"	"58.2"	"100.000"	"52.0238"	"16173"	"16173"	"16155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.9"	""	"71.1"	""	"74.5"	""	"97.6"	"2.3"	"106.3"	"104.2"	""	"897"	"48"	"36.000"	"29.000"	"0.000720713151976276"	"17"	"0"	"1.91E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYIDSNNNPER"	"[K].iYIDSNNNPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.40234"	"1563.79741"	"1563.79645"	"0.61"	"0.00048"	"8/102"	"8"	"102"	"688870.359863281"	"HCD"	"MS2"	"10.87707"	"37.0"	"100.000"	"52.4546"	"16315"	"16315"	"16291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.7"	""	"45.8"	""	"51.7"	""	"52.0"	""	"64.3"	"76.8"	""	"898"	"48"	"36.000"	"29.000"	"0.000637156827238403"	"16"	"0"	"0.0001171"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"782.42560"	"1563.84392"	"1563.85313"	"-5.89"	"-0.00460"	"8/100"	"8"	"100"	"176787.426879883"	"HCD"	"MS2"	"100"	"14.3"	"100.000"	"49.1243"	"14998"	"14998"	"14972"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.5"	""	"19.0"	""	"15.4"	""	"24.5"	""	"28.0"	"26.4"	""	"1101"	"11"	"37.000"	"30.000"	"4.31278018342799"	"20"	"0.005392"	"0.06843"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"782.42725"	"1563.84722"	"1563.85313"	"-3.78"	"-0.00296"	"4/100"	"4"	"100"	"136736.041625977"	"HCD"	"MS2"	"100"	"12.5"	"100.000"	"49.4317"	"15088"	"15088"	"15064"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"17.7"	""	"16.1"	""	"17.0"	""	"29.1"	"20.1"	""	"1084"	"10"	"37.000"	"30.000"	"5.40753434591824"	"14"	"0.004213"	"0.04761"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"782.42786"	"1563.84844"	"1563.85313"	"-3.00"	"-0.00235"	"14/100"	"14"	"100"	"257738.198181152"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"48.6539"	"14808"	"14808"	"14785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.6"	""	"28.1"	""	"27.9"	""	"33.1"	"1.7"	"36.9"	"41.1"	""	"1086"	"40"	"37.000"	"30.000"	"0.00565978364160565"	"20"	"0"	"0.0001712"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"782.42926"	"1563.85124"	"1563.85313"	"-1.20"	"-0.00094"	"7/100"	"7"	"100"	"232148.226501465"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"49.0183"	"14920"	"14920"	"14903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.2"	""	"30.8"	""	"29.8"	""	"37.2"	""	"43.5"	"37.0"	""	"1121"	"20"	"37.000"	"30.000"	"0.559210885772541"	"16"	"0.001951"	"0.01708"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"782.42957"	"1563.85185"	"1563.85313"	"-0.81"	"-0.00064"	"7/100"	"7"	"100"	"114666.843994141"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"49.7489"	"15217"	"15217"	"15193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"14.8"	""	"18.9"	""	"14.7"	""	"25.3"	"21.7"	""	"1134"	"14"	"37.000"	"30.000"	"2.4020556175009"	"14"	"0.006885"	"0.08644"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"782.42957"	"1563.85185"	"1563.85313"	"-0.81"	"-0.00064"	"13/100"	"13"	"100"	"276486.131530762"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"48.3482"	"14684"	"14684"	"14657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.6"	""	"29.0"	""	"31.4"	""	"42.0"	""	"44.3"	"45.8"	""	"1134"	"43"	"37.000"	"30.000"	"0.00292808081377264"	"21"	"0"	"0.0001063"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"521.95612"	"1563.85379"	"1563.85313"	"0.43"	"0.00022"	"11/100"	"11"	"100"	"2022994.19567871"	"HCD"	"MS2"	"19.03063"	"61.5"	"100.000"	"48.5391"	"14762"	"14762"	"14734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.0"	""	"85.1"	""	"83.8"	""	"98.2"	"0.1"	"114.6"	"112.4"	""	"1145"	"21"	"37.000"	"30.000"	"0.416653938097332"	"19"	"9.9E-05"	"0.0005672"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"521.95618"	"1563.85398"	"1563.85313"	"0.54"	"0.00028"	"9/100"	"9"	"100"	"1609145.23547363"	"HCD"	"MS2"	"0"	"52.1"	"100.000"	"48.9014"	"14873"	"14873"	"14851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.0"	""	"63.5"	""	"78.8"	""	"74.8"	"3.1"	"94.0"	"98.9"	""	"1146"	"28"	"37.000"	"30.000"	"0.0867270595353947"	"19"	"9.9E-05"	"0.0004356"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFPQAANGSAK"	"[R].nFPQAAnGSAk.[D]"	"N-Term(TMT6plex); N7(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"Q9QYL8"	"Acyl-protein thioesterase 2 OS=Rattus norvegicus OX=10116 GN=Lypla2 PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"782.43097"	"1563.85466"	"1563.85313"	"0.98"	"0.00077"	"8/100"	"8"	"100"	"129462.797241211"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"49.4370"	"15125"	"15125"	"15095"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.9"	""	"11.9"	""	"13.0"	""	"20.9"	""	"22.0"	"17.4"	""	"1156"	"19"	"37.000"	"30.000"	"0.808961472446973"	"18"	"0.003529"	"0.03895"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8608"	"0.0000"	"1"	"1"	"1"	"782.43439"	"1563.86150"	"1563.86302"	"-0.98"	"-0.00076"	"10/98"	"10"	"98"	"3950101.68530273"	"HCD"	"MS2"	"0"	"167.2"	"100.000"	"62.7080"	"20512"	"20512"	"20499"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.2"	""	"198.0"	""	"243.0"	""	"235.4"	""	"318.5"	"332.3"	""	"1067"	"79"	"37.000"	"30.000"	"6.9364046988076E-07"	"28"	"0"	"1.711E-06"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"782.43451"	"1563.86174"	"1563.86302"	"-0.82"	"-0.00064"	"9/98"	"9"	"98"	"957807.802307129"	"HCD"	"MS2"	"20.12457"	"79.8"	"100.000"	"62.6711"	"20498"	"20498"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.6"	""	"120.0"	""	"114.3"	""	"115.3"	""	"161.1"	"155.2"	""	"1092"	"6"	"37.000"	"30.000"	"14.8659491421054"	"13"	"0.002508"	"0.02338"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"521.95886"	"1563.86203"	"1563.86302"	"-0.63"	"-0.00033"	"11/98"	"11"	"98"	"6972488.54876709"	"HCD"	"MS2"	"8.324438"	"170.1"	"100.000"	"62.6045"	"20470"	"20470"	"20452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"276.2"	"2.8"	"217.1"	""	"221.5"	""	"270.6"	""	"311.6"	"311.9"	""	"1092"	"35"	"37.000"	"30.000"	"0.0164131766123501"	"20"	"0.0001686"	"0.001419"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"521.95892"	"1563.86222"	"1563.86302"	"-0.52"	"-0.00027"	"11/98"	"11"	"98"	"3201215.57562256"	"HCD"	"MS2"	"10.68123"	"87.1"	"100.000"	"62.9156"	"20596"	"20596"	"20576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.7"	""	"107.0"	""	"116.2"	""	"136.3"	""	"166.7"	"186.4"	""	"1093"	"46"	"37.000"	"30.000"	"0.00127230187231393"	"22"	"0"	"0.0002005"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"521.95898"	"1563.86240"	"1563.86302"	"-0.40"	"-0.00021"	"8/98"	"8"	"98"	"3433042.32214355"	"HCD"	"MS2"	"10.25122"	"86.6"	"100.000"	"62.9560"	"20580"	"20580"	"20561"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.2"	""	"104.8"	""	"124.5"	""	"133.1"	""	"165.9"	"183.4"	""	"1095"	"50"	"37.000"	"30.000"	"0.000556396159346706"	"24"	"0"	"0.0001166"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"782.43500"	"1563.86272"	"1563.86302"	"-0.19"	"-0.00015"	"15/98"	"15"	"98"	"437378.085083008"	"HCD"	"MS2"	"0"	"38.8"	"100.000"	"63.1059"	"20642"	"20642"	"20625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.3"	""	"42.7"	""	"58.4"	""	"51.9"	"1.7"	"75.3"	"78.8"	""	"1089"	"53"	"37.000"	"30.000"	"0.000297850191795768"	"23"	"0"	"2.258E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"782.43506"	"1563.86284"	"1563.86302"	"-0.12"	"-0.00009"	"10/98"	"10"	"98"	"3800540.82342529"	"HCD"	"MS2"	"0"	"265.8"	"100.000"	"62.7974"	"20516"	"20516"	"20499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"410.4"	""	"319.6"	""	"382.3"	""	"380.6"	"1.8"	"514.0"	"510.2"	""	"1079"	"82"	"37.000"	"30.000"	"3.63907870943029E-07"	"30"	"0"	"1.152E-06"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8289"	"0.0000"	"1"	"1"	"1"	"782.43524"	"1563.86321"	"1563.86302"	"0.12"	"0.00009"	"10/98"	"10"	"98"	"696956.121826172"	"HCD"	"MS2"	"0"	"58.4"	"100.000"	"63.0145"	"20637"	"20637"	"20620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.9"	""	"67.0"	""	"83.5"	""	"83.8"	"1.1"	"122.3"	"112.0"	""	"1111"	"76"	"37.000"	"30.000"	"1.36359080266304E-06"	"30"	"0"	"8.945E-08"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"521.95929"	"1563.86332"	"1563.86302"	"0.19"	"0.00010"	"11/98"	"11"	"98"	"6917662.7210083"	"HCD"	"MS2"	"10.83932"	"166.9"	"100.000"	"62.6315"	"20448"	"20448"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"265.2"	""	"230.1"	""	"226.0"	""	"250.1"	"7.0"	"292.5"	"309.4"	""	"1112"	"39"	"37.000"	"30.000"	"0.00729583143854676"	"21"	"0"	"0.0003011"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"782.43549"	"1563.86370"	"1563.86302"	"0.43"	"0.00034"	"10/98"	"10"	"98"	"853169.044799805"	"HCD"	"MS2"	"24.24855"	"71.5"	"100.000"	"62.6774"	"20467"	"20467"	"20443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"97.2"	""	"100.5"	""	"84.9"	""	"105.6"	""	"146.3"	"144.9"	""	"1107"	"2"	"37.000"	"30.000"	"31.9240237487611"	"13"	"0.002035"	"0.01805"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8732"	"0.0000"	"1"	"1"	"1"	"782.43689"	"1563.86650"	"1563.86302"	"2.23"	"0.00174"	"17/98"	"17"	"98"	"752566.536865234"	"HCD"	"MS2"	"18.76826"	"68.2"	"100.000"	"62.4841"	"20388"	"20388"	"20365"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.0"	""	"91.3"	""	"90.8"	""	"101.1"	""	"121.0"	"135.3"	""	"1112"	"71"	"37.000"	"30.000"	"4.27636524799355E-06"	"26"	"0"	"4.113E-07"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAISGIGTDEK"	"[K].dAISGIGTDEk.[C]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"782.43726"	"1563.86724"	"1563.86302"	"2.69"	"0.00211"	"14/98"	"14"	"98"	"735455.014099121"	"HCD"	"MS2"	"16.95858"	"59.1"	"100.000"	"62.4341"	"20401"	"20401"	"20377"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.6"	""	"75.1"	""	"82.3"	""	"95.3"	""	"102.9"	"116.5"	""	"1113"	"44"	"37.000"	"30.000"	"0.00246868210347842"	"26"	"0"	"3.644E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSYEGQPLPK"	"[R].sSYEGQPLPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4773"	"0.0000"	"1"	"1"	"1"	"782.44269"	"1563.87810"	"1563.87828"	"-0.11"	"-0.00009"	"8/86"	"8"	"86"	"616282.186462402"	"HCD"	"MS2"	"4.319905"	"42.1"	"100.000"	"53.1820"	"16646"	"16646"	"16625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.3"	""	"55.2"	""	"65.0"	""	"68.8"	"1.3"	"69.6"	"75.6"	""	"1049"	"44"	"37.000"	"30.000"	"0.00200791577869673"	""	"0"	"0.0001834"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSYEGQPLPK"	"[R].sSYEGQPLPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4375"	"0.0000"	"1"	"1"	"1"	"782.44293"	"1563.87859"	"1563.87828"	"0.20"	"0.00015"	"8/86"	"8"	"86"	"795242.869995117"	"HCD"	"MS2"	"0"	"54.4"	"100.000"	"53.4812"	"16734"	"16734"	"16714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.3"	""	"81.1"	""	"81.8"	""	"83.8"	"0.9"	"92.0"	"101.0"	""	"1058"	"48"	"37.000"	"30.000"	"0.000898370892152262"	""	"0"	"5.753E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSYEGQPLPK"	"[R].sSYEGQPLPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"782.44360"	"1563.87993"	"1563.87828"	"1.06"	"0.00083"	"8/86"	"8"	"86"	"534967.483215332"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"52.8528"	"16512"	"16512"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"51.1"	""	"64.2"	""	"57.9"	"0.0"	"82.6"	"68.6"	""	"1062"	"40"	"37.000"	"30.000"	"0.0053962805591434"	""	"9.9E-05"	"0.0004436"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSYEGQPLPK"	"[R].sSYEGQPLPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"Q9Z2Q1"	"Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2"	"0"	"2"	"2"	"0.2821"	"0.0000"	"1"	"1"	"1"	"782.44373"	"1563.88017"	"1563.87828"	"1.21"	"0.00095"	"6/86"	"6"	"86"	"371642.583129883"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"53.1541"	"16601"	"16601"	"16570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.0"	""	"38.4"	""	"46.2"	""	"33.5"	""	"47.1"	"47.6"	""	"1045"	"39"	"37.000"	"30.000"	"0.0062673838589555"	""	"0"	"9.276E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.6939"	"0.0000"	"1"	"1"	"1"	"782.92145"	"1564.83562"	"1564.83714"	"-0.97"	"-0.00076"	"8/104"	"8"	"104"	"1177091.28497314"	"HCD"	"MS2"	"0"	"115.0"	"100.000"	"59.7599"	"19317"	"19317"	"19303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.3"	""	"162.3"	""	"183.2"	""	"151.3"	"1.2"	"206.0"	"205.5"	""	"1108"	"49"	"37.000"	"30.000"	"0.000625906936728731"	""	"0"	"5.772E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"782.92194"	"1564.83660"	"1564.83714"	"-0.35"	"-0.00027"	"8/104"	"8"	"104"	"3920585.25341797"	"HCD"	"MS2"	"0"	"342.6"	"100.000"	"59.7046"	"19261"	"19261"	"19244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"581.9"	""	"482.4"	""	"533.2"	""	"456.2"	"4.5"	"564.0"	"617.9"	""	"1115"	"50"	"37.000"	"30.000"	"0.000598749097380244"	""	"0"	"6.76E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"782.92212"	"1564.83696"	"1564.83714"	"-0.12"	"-0.00009"	"9/104"	"9"	"104"	"553524.707336426"	"HCD"	"MS2"	"0"	"56.2"	"100.000"	"59.4077"	"19141"	"19141"	"19114"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.5"	""	"69.7"	""	"83.7"	""	"87.1"	""	"91.1"	"98.4"	""	"1096"	"47"	"37.000"	"30.000"	"0.00104419247344386"	"28"	"0"	"1.151E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"782.92224"	"1564.83721"	"1564.83714"	"0.04"	"0.00003"	"8/104"	"8"	"104"	"3636223.90582275"	"HCD"	"MS2"	"0"	"319.2"	"100.000"	"59.4859"	"19206"	"19206"	"19197"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"548.2"	""	"491.2"	""	"480.8"	""	"463.8"	""	"500.9"	"534.6"	""	"1123"	"46"	"37.000"	"30.000"	"0.0012715977787135"	"25"	"0"	"4.047E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7045"	"0.0000"	"1"	"1"	"1"	"782.92249"	"1564.83769"	"1564.83714"	"0.35"	"0.00028"	"9/104"	"9"	"104"	"584931.635009766"	"HCD"	"MS2"	"7.466123"	"55.7"	"100.000"	"59.9999"	"19381"	"19381"	"19369"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.4"	""	"72.0"	""	"82.9"	""	"81.8"	"1.6"	"90.1"	"101.9"	""	"1120"	"44"	"37.000"	"30.000"	"0.00221915699183046"	"29"	"0"	"1.844E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEGGTWSVEK"	"[K].nEGGTWSVEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"782.92261"	"1564.83794"	"1564.83714"	"0.51"	"0.00040"	"9/104"	"9"	"104"	"395198.702819824"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"59.1890"	"19087"	"19087"	"19057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.3"	""	"61.6"	""	"55.8"	""	"56.2"	"1.0"	"64.8"	"63.0"	""	"1118"	"48"	"37.000"	"30.000"	"0.000867784338566567"	"27"	"0"	"3.3E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.1087"	"0.0000"	"1"	"1"	"1"	"782.93842"	"1564.86955"	"1564.87353"	"-2.54"	"-0.00199"	"6/96"	"6"	"96"	"204198.231201172"	"HCD"	"MS2"	"16.57848"	"19.6"	"100.000"	"63.4084"	"20797"	"20797"	"20766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"28.5"	""	"32.6"	""	"25.3"	""	"34.8"	"33.5"	""	"1136"	"46"	"37.000"	"30.000"	"0.00153584835081382"	"20"	"0.0001686"	"0.001223"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.3617"	"0.0000"	"1"	"1"	"1"	"782.93878"	"1564.87029"	"1564.87353"	"-2.07"	"-0.00162"	"9/96"	"9"	"96"	"336749.145263672"	"HCD"	"MS2"	"17.45331"	"29.1"	"100.000"	"67.3977"	"22414"	"22414"	"22384"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.0"	""	"38.8"	""	"30.4"	""	"44.4"	""	"57.9"	"47.0"	""	"1117"	"47"	"37.000"	"30.000"	"0.00113246079885264"	"19"	"0"	"1.012E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.3488"	"0.0000"	"1"	"1"	"1"	"782.93976"	"1564.87224"	"1564.87353"	"-0.82"	"-0.00064"	"8/96"	"8"	"96"	"409893.72833252"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"63.7487"	"20936"	"20936"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.1"	""	"63.0"	""	"35.7"	""	"61.5"	"1.7"	"66.8"	"56.1"	""	"1121"	"43"	"37.000"	"30.000"	"0.00283514723052745"	"22"	"0"	"0.0001562"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"782.94000"	"1564.87273"	"1564.87353"	"-0.51"	"-0.00040"	"15/96"	"15"	"96"	"321717.899536133"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"67.7848"	"22570"	"22570"	"22550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.0"	""	"39.5"	""	"34.7"	""	"39.2"	""	"47.9"	"48.3"	""	"1118"	"40"	"37.000"	"30.000"	"0.00499357765406911"	"19"	"0"	"1.761E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.3125"	"0.0000"	"1"	"1"	"1"	"782.94012"	"1564.87297"	"1564.87353"	"-0.36"	"-0.00028"	"9/96"	"9"	"96"	"448836.476501465"	"HCD"	"MS2"	"0"	"37.7"	"100.000"	"67.6247"	"22474"	"22474"	"22453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.1"	""	"54.5"	""	"41.0"	""	"61.4"	"1.8"	"67.6"	"58.6"	""	"1118"	"48"	"37.000"	"30.000"	"0.000793253154624203"	"19"	"0"	"9.242E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"782.94019"	"1564.87309"	"1564.87353"	"-0.28"	"-0.00022"	"8/96"	"8"	"96"	"279232.782409668"	"HCD"	"MS2"	"12.00548"	"27.3"	"100.000"	"63.5687"	"20830"	"20830"	"20805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.0"	""	"39.9"	""	"28.5"	""	"43.8"	""	"50.3"	"46.1"	""	"1118"	"52"	"37.000"	"30.000"	"0.000326145813289023"	"19"	"0"	"6.97E-06"	"0.892"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.3784"	"0.0000"	"1"	"1"	"1"	"782.94025"	"1564.87322"	"1564.87353"	"-0.20"	"-0.00016"	"8/96"	"8"	"96"	"314158.495422363"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"67.3207"	"22351"	"22351"	"22327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.8"	""	"26.7"	""	"32.9"	""	"42.1"	""	"54.3"	"41.7"	""	"1118"	"37"	"37.000"	"30.000"	"0.0115987665625729"	"19"	"0"	"5.682E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGNNLVSGYPK"	"[K].gGnNLVSGYPk.[R]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"782.94067"	"1564.87407"	"1564.87353"	"0.35"	"0.00027"	"8/96"	"8"	"96"	"388525.598571777"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"63.8669"	"20951"	"20951"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.4"	""	"58.3"	""	"40.2"	""	"54.9"	""	"53.8"	"66.1"	""	"1096"	"33"	"37.000"	"30.000"	"0.0250484327908952"	"16"	"0.0001686"	"0.001237"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"522.59753"	"1565.77805"	"1565.77974"	"-1.08"	"-0.00056"	"8/84"	"8"	"84"	"910062.794799805"	"HCD"	"MS2"	"13.58832"	"25.7"	"100.000"	"77.4475"	"26456"	"26456"	"26439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"36.5"	""	"35.3"	""	"44.8"	""	"45.6"	"56.3"	""	"755"	"17"	"35.000"	"28.000"	"0.709442098343233"	"20"	"0.0001686"	"0.001376"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"522.59753"	"1565.77805"	"1565.77974"	"-1.08"	"-0.00056"	"10/84"	"10"	"84"	"907740.25177002"	"HCD"	"MS2"	"15.78469"	"22.9"	"100.000"	"77.7712"	"26587"	"26587"	"26565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.4"	""	"30.1"	""	"31.8"	""	"38.5"	""	"40.5"	"44.8"	""	"755"	"28"	"35.000"	"28.000"	"0.063667376708425"	"17"	"9.9E-05"	"0.000739"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.59772"	"1565.77860"	"1565.77974"	"-0.73"	"-0.00038"	"6/84"	"6"	"84"	"1134778.00531006"	"HCD"	"MS2"	"18.00265"	"26.4"	"100.000"	"77.6817"	"26578"	"26578"	"26567"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"27.2"	""	"31.9"	""	"51.5"	"0.1"	"49.6"	"57.6"	""	"759"	"42"	"35.000"	"28.000"	"0.00223466167207446"	"15"	"0"	"9.359E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEEVHDLER"	"[K].fYEEVHDLER.[K]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q9Z2G8; Q5U2Z3"	"Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus OX=10116 GN=Nap1l1 PE=1 SV=1; Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"522.59882"	"1565.78189"	"1565.77974"	"1.38"	"0.00072"	"9/84"	"9"	"84"	"565471.802062988"	"HCD"	"MS2"	"29.19258"	"18.9"	"100.000"	"78.0247"	"26717"	"26717"	"26699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"29.8"	""	"24.2"	""	"36.9"	"1.0"	"31.0"	"31.6"	""	"802"	"13"	"36.000"	"29.000"	"2.17843382928466"	"16"	"0.001488"	"0.01284"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASLTSAASIDGSR"	"[R].tASLTSAASIDGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.41772"	"1565.82817"	"1565.83323"	"-3.23"	"-0.00253"	"7/128"	"7"	"128"	"260121.770446777"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"55.4008"	"17552"	"17552"	"17522"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.5"	""	"22.7"	""	"27.3"	""	"36.5"	"0.6"	"35.5"	"41.0"	""	"1002"	"25"	"36.000"	"30.000"	"0.145491534988669"	"14"	"0.0001991"	"0.002157"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASLTSAASIDGSR"	"[R].tASLTSAASIDGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.41864"	"1565.83000"	"1565.83323"	"-2.06"	"-0.00161"	"5/128"	"5"	"128"	"192820.665893555"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"55.7285"	"17683"	"17683"	"17667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"24.3"	""	"19.9"	""	"27.2"	""	"33.7"	"31.8"	""	"1038"	"4"	"37.000"	"30.000"	"20.1914430252031"	"13"	"0.003529"	"0.03928"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASLTSAASIDGSR"	"[R].tASLTSAASIDGSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"Q8VBU2"	"Protein NDRG2 OS=Rattus norvegicus OX=10116 GN=Ndrg2 PE=1 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"783.42059"	"1565.83391"	"1565.83323"	"0.43"	"0.00034"	"9/128"	"9"	"128"	"265986.592041016"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"55.8492"	"17700"	"17700"	"17676"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"20.6"	""	"22.1"	""	"36.2"	""	"33.6"	"39.9"	""	"1034"	"51"	"37.000"	"30.000"	"0.000423146295465687"	"21"	"0"	"1.068E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLTAEDLYEAR"	"[R].rLTAEDLYEAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"1"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"522.62091"	"1565.84818"	"1565.84849"	"-0.20"	"-0.00010"	"8/112"	"8"	"112"	"2003384.57519531"	"HCD"	"MS2"	"38.02692"	"38.0"	"100.000"	"57.7368"	"18495"	"18495"	"18466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"51.3"	""	"59.8"	""	"61.1"	""	"64.8"	"66.7"	""	"1036"	"11"	"37.000"	"30.000"	"4.3785444179303"	"16"	"0.009514"	"0.1261"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGNEGIDVPIPR"	"[R].iGGNEGIDVPIPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9516"	"0.0000"	"1"	"1"	"1"	"522.63257"	"1565.88315"	"1565.88487"	"-1.10"	"-0.00057"	"9/120"	"9"	"120"	"692835.923828125"	"HCD"	"MS2"	"6.606487"	"11.0"	"100.000"	"100.2650"	"35700"	"35700"	"35678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"10.9"	""	"20.4"	""	"16.2"	""	"22.0"	"17.7"	""	"889"	"62"	"36.000"	"29.000"	"2.88318005712192E-05"	"19"	"0"	"2.83E-07"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGNEGIDVPIPR"	"[R].iGGNEGIDVPIPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"522.63281"	"1565.88388"	"1565.88487"	"-0.63"	"-0.00033"	"13/120"	"13"	"120"	"747432.105651855"	"HCD"	"MS2"	"14.16129"	"12.2"	"100.000"	"100.1578"	"35629"	"35629"	"35604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"15.1"	""	"17.3"	""	"20.2"	""	"21.5"	"23.1"	""	"873"	"59"	"36.000"	"29.000"	"5.79407680799031E-05"	"17"	"0"	"1.069E-06"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGNEGIDVPIPR"	"[R].iGGNEGIDVPIPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9740"	"0.0000"	"1"	"1"	"1"	"783.44586"	"1565.88445"	"1565.88487"	"-0.27"	"-0.00021"	"11/120"	"11"	"120"	"1052901.70092773"	"HCD"	"MS2"	"0"	"47.4"	"100.000"	"100.4360"	"35770"	"35770"	"35753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"65.0"	""	"59.3"	""	"80.4"	""	"89.3"	"81.0"	""	"873"	"77"	"36.000"	"29.000"	"9.57159354280471E-07"	"19"	"0"	"2.902E-08"	"1.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGNEGIDVPIPR"	"[R].iGGNEGIDVPIPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"783.44641"	"1565.88555"	"1565.88487"	"0.43"	"0.00034"	"10/120"	"10"	"120"	"340250.154968262"	"HCD"	"MS2"	"13.92931"	"19.5"	"100.000"	"100.1544"	"35655"	"35655"	"35633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.9"	""	"27.6"	""	"27.7"	""	"33.2"	""	"36.1"	"35.3"	""	"876"	"60"	"36.000"	"29.000"	"4.66094641982251E-05"	"19"	"0"	"3.358E-06"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGNEGIDVPIPR"	"[R].iGGNEGIDVPIPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9872"	"0.0000"	"1"	"1"	"1"	"783.44647"	"1565.88567"	"1565.88487"	"0.51"	"0.00040"	"11/120"	"11"	"120"	"928593.793640137"	"HCD"	"MS2"	"0"	"44.3"	"100.000"	"100.3542"	"35709"	"35709"	"35692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.5"	""	"51.7"	""	"60.1"	""	"81.0"	""	"81.4"	"84.3"	""	"876"	"78"	"36.000"	"29.000"	"6.36024888503431E-07"	"19"	"0"	"8.081E-08"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGNEGIDVPIPR"	"[R].iGGNEGIDVPIPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.44739"	"1565.88750"	"1565.88487"	"1.68"	"0.00131"	"8/120"	"8"	"120"	"327838.946228027"	"HCD"	"MS2"	"17.8221"	"19.3"	"100.000"	"100.0538"	"35587"	"35587"	"35556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"24.8"	""	"26.6"	""	"32.6"	""	"36.9"	"34.7"	""	"862"	"32"	"36.000"	"29.000"	"0.0265141232137953"	"15"	"0.001261"	"0.01015"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"522.63495"	"1565.89029"	"1565.89393"	"-2.32"	"-0.00121"	"14/84"	"14"	"84"	"1956196.55969238"	"HCD"	"MS2"	"10.80036"	"54.5"	"100.000"	"77.0808"	"26310"	"26310"	"26296"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.7"	""	"94.5"	""	"116.1"	""	"71.8"	""	"103.2"	"73.8"	""	"890"	"46"	"36.000"	"29.000"	"0.00112294894375386"	"23"	"0"	"1.448E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"522.63501"	"1565.89048"	"1565.89393"	"-2.21"	"-0.00115"	"13/84"	"13"	"84"	"2358911.80670166"	"HCD"	"MS2"	"5.153265"	"64.3"	"100.000"	"77.1182"	"26356"	"26356"	"26341"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.1"	""	"109.0"	""	"133.1"	""	"91.3"	""	"125.2"	"88.1"	""	"890"	"31"	"36.000"	"29.000"	"0.0359219588460733"	"17"	"0"	"8.469E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"522.63513"	"1565.89084"	"1565.89393"	"-1.97"	"-0.00103"	"13/84"	"13"	"84"	"3859788.94891357"	"HCD"	"MS2"	"27.74178"	"94.7"	"100.000"	"76.7395"	"26174"	"26174"	"26152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.4"	""	"169.9"	""	"191.1"	""	"126.1"	""	"170.5"	"123.1"	""	"882"	"40"	"36.000"	"29.000"	"0.0040034885380858"	"20"	"0"	"6.155E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"783.44922"	"1565.89116"	"1565.89393"	"-1.77"	"-0.00138"	"11/92"	"11"	"92"	"217811.353027344"	"HCD"	"MS2"	"20.32174"	"19.9"	"100.000"	"81.0806"	"27933"	"27933"	"27907"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"26.7"	""	"26.3"	""	"32.4"	""	"40.6"	"33.9"	""	"864"	"20"	"36.000"	"29.000"	"0.414461072814883"	"21"	"0.0001686"	"0.001215"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"783.44934"	"1565.89141"	"1565.89393"	"-1.61"	"-0.00126"	"12/92"	"12"	"92"	"304229.420227051"	"HCD"	"MS2"	"17.92056"	"27.7"	"100.000"	"81.1563"	"27991"	"27991"	"27967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"35.4"	""	"42.2"	""	"51.0"	"0.7"	"40.4"	"44.7"	""	"873"	"38"	"36.000"	"29.000"	"0.00729431053146623"	"21"	"0"	"5.854E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"522.63538"	"1565.89157"	"1565.89393"	"-1.50"	"-0.00078"	"13/84"	"13"	"84"	"3806570.79223633"	"HCD"	"MS2"	"29.09524"	"91.7"	"100.000"	"76.8233"	"26239"	"26239"	"26218"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.0"	""	"166.7"	""	"177.5"	""	"130.8"	"1.8"	"167.5"	"116.7"	""	"873"	"39"	"36.000"	"29.000"	"0.00521175807598656"	"20"	"0"	"7.953E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"783.44946"	"1565.89165"	"1565.89393"	"-1.46"	"-0.00114"	"10/84"	"10"	"84"	"2209238.68756104"	"HCD"	"MS2"	"0"	"165.9"	"100.000"	"76.8601"	"26254"	"26254"	"26234"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.2"	""	"318.5"	""	"349.4"	""	"218.1"	"0.4"	"296.5"	"182.1"	""	"873"	"76"	"36.000"	"29.000"	"9.81712335447317E-07"	"24"	"0"	"8.86E-08"	"1.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.8906"	"0.0000"	"1"	"1"	"1"	"783.44952"	"1565.89177"	"1565.89393"	"-1.38"	"-0.00108"	"18/84"	"18"	"84"	"2634856.27160645"	"HCD"	"MS2"	"3.98164"	"201.2"	"100.000"	"76.8082"	"26202"	"26202"	"26184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"246.0"	""	"391.3"	""	"428.6"	""	"263.1"	""	"346.3"	"226.2"	""	"873"	"64"	"36.000"	"29.000"	"1.80295234618705E-05"	"23"	"0"	"2.062E-06"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.9176"	"0.0000"	"1"	"1"	"1"	"783.44958"	"1565.89189"	"1565.89393"	"-1.30"	"-0.00102"	"10/84"	"10"	"84"	"923030.085876465"	"HCD"	"MS2"	"0"	"78.6"	"100.000"	"77.0762"	"26308"	"26308"	"26296"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.6"	""	"133.5"	""	"166.2"	""	"108.5"	"1.5"	"146.5"	"94.4"	""	"873"	"85"	"36.000"	"29.000"	"1.4420630466257E-07"	"25"	"0"	"5.02E-08"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"3"	"3"	"0.4889"	"0.0000"	"1"	"1"	"1"	"522.63562"	"1565.89231"	"1565.89393"	"-1.04"	"-0.00054"	"8/92"	"8"	"92"	"1746390.68548584"	"HCD"	"MS2"	"26.14957"	"49.7"	"100.000"	"70.1655"	"23506"	"23506"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.7"	""	"69.6"	""	"69.2"	""	"86.3"	""	"95.7"	"95.6"	""	"834"	"45"	"36.000"	"29.000"	"0.001416237386702"	""	"0"	"0.0001767"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"522.63580"	"1565.89286"	"1565.89393"	"-0.69"	"-0.00036"	"10/92"	"10"	"92"	"1714600.84814453"	"HCD"	"MS2"	"19.67389"	"46.1"	"100.000"	"81.2602"	"28033"	"28033"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.4"	""	"67.6"	""	"60.2"	""	"70.5"	"1.6"	"84.4"	"84.7"	""	"847"	"32"	"36.000"	"29.000"	"0.0282392666761969"	"20"	"0"	"0.0001912"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"522.63586"	"1565.89304"	"1565.89393"	"-0.57"	"-0.00030"	"9/92"	"9"	"92"	"5526958.11199951"	"HCD"	"MS2"	"8.182625"	"141.1"	"100.000"	"81.5097"	"28107"	"28107"	"28096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.3"	""	"210.4"	""	"215.1"	""	"229.9"	""	"229.0"	"248.8"	""	"847"	"32"	"36.000"	"29.000"	"0.0260527405592629"	"24"	"0"	"0.0002844"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALAAAGYDVEK"	"[K].aLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"P15865"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3"	"P15865; P06349"	"Histone H1.4 OS=Rattus norvegicus OX=10116 GN=Hist1h1e PE=1 SV=3; Histone H1t OS=Rattus norvegicus OX=10116 GN=Hist1h1t PE=1 SV=2"	"0"	"2"	"2"	"0.8608"	"0.0000"	"1"	"1"	"1"	"783.45038"	"1565.89348"	"1565.89393"	"-0.29"	"-0.00022"	"10/84"	"10"	"84"	"1069483.6541748"	"HCD"	"MS2"	"0"	"82.1"	"100.000"	"77.1386"	"26364"	"26364"	"26352"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.5"	""	"148.8"	""	"175.5"	""	"117.4"	"3.3"	"138.5"	"93.6"	""	"847"	"79"	"36.000"	"29.000"	"4.88487454687233E-07"	"28"	"0"	"2.617E-07"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"783.45038"	"1565.89348"	"1565.89393"	"-0.29"	"-0.00022"	"8/92"	"8"	"92"	"2734219.46002197"	"HCD"	"MS2"	"8.231721"	"200.8"	"100.000"	"81.4538"	"28111"	"28111"	"28093"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"308.9"	""	"307.7"	""	"306.0"	""	"301.1"	""	"328.3"	"347.8"	""	"847"	"48"	"36.000"	"29.000"	"0.00064841554002234"	"20"	"0"	"1.535E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"522.63605"	"1565.89359"	"1565.89393"	"-0.22"	"-0.00011"	"10/92"	"10"	"92"	"2530651.39703369"	"HCD"	"MS2"	"16.9097"	"65.1"	"100.000"	"81.2422"	"27999"	"27999"	"27982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.7"	""	"106.3"	""	"97.9"	""	"97.2"	"0.2"	"108.0"	"107.3"	""	"844"	"32"	"36.000"	"29.000"	"0.024283565355628"	"22"	"9.9E-05"	"0.000591"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"522.63605"	"1565.89359"	"1565.89393"	"-0.22"	"-0.00011"	"9/92"	"9"	"92"	"1668531.20257568"	"HCD"	"MS2"	"9.249221"	"43.9"	"100.000"	"81.8620"	"28277"	"28277"	"28259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"72.4"	""	"64.0"	""	"64.2"	"1.0"	"73.1"	"76.4"	""	"844"	"29"	"36.000"	"29.000"	"0.0528825575825278"	"19"	"9.9E-05"	"0.0004953"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"522.63605"	"1565.89359"	"1565.89393"	"-0.22"	"-0.00011"	"8/92"	"8"	"92"	"1214180.36871338"	"HCD"	"MS2"	"27.37782"	"40.2"	"100.000"	"70.2364"	"23568"	"23568"	"23547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.9"	""	"43.8"	""	"56.1"	""	"69.7"	"1.2"	"78.5"	"73.7"	""	"844"	"34"	"36.000"	"29.000"	"0.0163799454448054"	"24"	"0.0001686"	"0.001084"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"783.45044"	"1565.89360"	"1565.89393"	"-0.21"	"-0.00016"	"16/92"	"16"	"92"	"2732915.3604126"	"HCD"	"MS2"	"6.933809"	"211.5"	"100.000"	"81.3896"	"28059"	"28059"	"28042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"319.5"	""	"334.3"	""	"312.7"	""	"331.3"	""	"347.3"	"356.2"	""	"844"	"59"	"36.000"	"29.000"	"5.4993638050687E-05"	"23"	"0"	"4.132E-06"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"522.63611"	"1565.89377"	"1565.89393"	"-0.10"	"-0.00005"	"12/92"	"12"	"92"	"5947979.52172852"	"HCD"	"MS2"	"9.829344"	"144.5"	"100.000"	"81.5555"	"28153"	"28153"	"28140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.9"	""	"221.5"	""	"208.6"	""	"221.1"	""	"249.9"	"254.4"	""	"830"	"34"	"36.000"	"29.000"	"0.0147586997206129"	"19"	"0"	"0.0003646"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"783.45056"	"1565.89385"	"1565.89393"	"-0.05"	"-0.00004"	"9/92"	"9"	"92"	"701155.095458984"	"HCD"	"MS2"	"2.971137"	"68.3"	"100.000"	"70.5405"	"23691"	"23691"	"23673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.3"	""	"80.3"	""	"98.7"	""	"115.3"	"0.9"	"132.2"	"131.7"	""	"829"	"65"	"36.000"	"29.000"	"1.3884317453092E-05"	"24"	"0"	"3.735E-07"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"783.45068"	"1565.89409"	"1565.89393"	"0.10"	"0.00008"	"9/92"	"9"	"92"	"1836651.75671387"	"HCD"	"MS2"	"4.253595"	"141.0"	"100.000"	"81.6711"	"28172"	"28172"	"28155"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"201.1"	""	"218.3"	""	"216.3"	""	"203.9"	"1.0"	"230.9"	"262.8"	""	"844"	"63"	"36.000"	"29.000"	"2.10529253708125E-05"	"24"	"0"	"1.879E-06"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIEEVYVGGK"	"[R].nIEEVYVGGk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"783.45074"	"1565.89421"	"1565.89393"	"0.18"	"0.00014"	"7/92"	"7"	"92"	"1678039.55072021"	"HCD"	"MS2"	"5.203034"	"132.0"	"100.000"	"81.7558"	"28234"	"28234"	"28216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"182.0"	""	"188.8"	""	"214.3"	""	"191.4"	"1.0"	"234.9"	"237.4"	""	"846"	"47"	"36.000"	"29.000"	"0.000869641722101293"	"21"	"0"	"1.682E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"783.45081"	"1565.89433"	"1565.89393"	"0.26"	"0.00020"	"15/92"	"15"	"92"	"513563.257507324"	"HCD"	"MS2"	"43.97812"	"54.2"	"100.000"	"70.1287"	"23491"	"23491"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.3"	""	"74.3"	""	"71.5"	""	"93.8"	""	"111.8"	"97.6"	""	"846"	"38"	"36.000"	"29.000"	"0.00689192221806602"	"19"	"0"	"0.00023"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"783.45093"	"1565.89458"	"1565.89393"	"0.41"	"0.00032"	"9/92"	"9"	"92"	"475133.237121582"	"HCD"	"MS2"	"31.68942"	"48.8"	"100.000"	"70.2387"	"23569"	"23569"	"23547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.3"	""	"51.4"	""	"58.9"	""	"88.6"	"3.0"	"107.0"	"91.2"	""	"842"	"42"	"36.000"	"29.000"	"0.00249047447987874"	"21"	"0"	"6.107E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSYGLSAEVK"	"[K].gPSYGLSAEVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"P37397"	"Calponin-3 OS=Rattus norvegicus OX=10116 GN=Cnn3 PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"783.45117"	"1565.89507"	"1565.89393"	"0.73"	"0.00057"	"15/92"	"15"	"92"	"669998.424255371"	"HCD"	"MS2"	"0"	"67.5"	"100.000"	"70.4561"	"23624"	"23624"	"23607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.1"	""	"82.6"	""	"99.7"	""	"115.2"	"0.2"	"130.4"	"122.0"	""	"839"	"51"	"36.000"	"29.000"	"0.000347321737677324"	"22"	"0"	"8.116E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDCFILDHGR"	"[R].sEDcFILDHGR.[D]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"522.91260"	"1566.72324"	"1566.72421"	"-0.62"	"-0.00032"	"12/94"	"12"	"94"	"1020049.3949585"	"HCD"	"MS2"	"38.6127"	"23.6"	"100.000"	"85.8558"	"29889"	"29889"	"29871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"33.3"	""	"35.0"	""	"38.1"	""	"41.6"	"43.6"	""	"354"	"43"	"32.000"	"25.000"	"0.000891196077554592"	"21"	"0"	"2.639E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDCFILDHGR"	"[R].sEDcFILDHGR.[D]"	"N-Term(TMT6plex); C4(Methylthio)"	"1"	"1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"Q68FP1"	"Gelsolin OS=Rattus norvegicus OX=10116 GN=Gsn PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"522.91321"	"1566.72507"	"1566.72421"	"0.55"	"0.00029"	"6/94"	"6"	"94"	"834612.455566406"	"HCD"	"MS2"	"36.57626"	"19.6"	"100.000"	"85.8914"	"29874"	"29874"	"29854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"29.7"	""	"28.4"	""	"28.7"	""	"35.8"	"39.4"	""	"359"	"28"	"32.000"	"25.000"	"0.0254720825143192"	"19"	"0"	"0.0002946"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"783.89209"	"1566.77690"	"1566.78173"	"-3.08"	"-0.00241"	"5/96"	"5"	"96"	"174390.927185059"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"65.2653"	"21518"	"21518"	"21489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"21.1"	""	"16.9"	""	"20.3"	""	"29.3"	"24.6"	""	"724"	"9"	"35.000"	"28.000"	"4.15631610981872"	"15"	"0.003317"	"0.03616"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"783.89313"	"1566.77898"	"1566.78173"	"-1.76"	"-0.00138"	"7/96"	"7"	"96"	"383171.26965332"	"HCD"	"MS2"	"19.8276"	"24.0"	"100.000"	"54.3139"	"17108"	"17108"	"17079"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"30.5"	""	"27.6"	""	"34.0"	""	"57.9"	"47.3"	""	"733"	"35"	"35.000"	"28.000"	"0.0127372003168935"	"21"	"9.9E-05"	"0.0007632"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.89368"	"1566.78008"	"1566.78173"	"-1.05"	"-0.00083"	"4/96"	"4"	"96"	"202492.808959961"	"HCD"	"MS2"	"48.09279"	"14.1"	"100.000"	"69.7891"	"23387"	"23387"	"23356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"19.0"	""	"19.4"	""	"17.9"	""	"25.9"	"31.1"	""	"743"	"4"	"35.000"	"28.000"	"16.5561296279673"	"13"	"0.007069"	"0.08996"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDmVETQQLMR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"783.89380"	"1566.78032"	"1566.78173"	"-0.90"	"-0.00070"	"9/96"	"9"	"96"	"348815.640991211"	"HCD"	"MS2"	"35.26131"	"22.2"	"100.000"	"54.3969"	"17108"	"17108"	"17082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.6"	""	"26.4"	""	"24.0"	""	"45.7"	""	"49.0"	"45.4"	""	"746"	"41"	"35.000"	"28.000"	"0.00292219256751797"	"20"	"0.001261"	"0.01028"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDMVETQQLmR.[V]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"783.89410"	"1566.78093"	"1566.78173"	"-0.51"	"-0.00040"	"8/96"	"8"	"96"	"404288.612854004"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"54.7119"	"17236"	"17236"	"17216"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"30.6"	""	"26.4"	""	"37.0"	""	"51.2"	"51.2"	""	"746"	"16"	"35.000"	"28.000"	"1.03206923373849"	"13"	"0.0001991"	"0.002441"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADMVETQQLMR"	"[K].aDmVETQQLMR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"Q4V8H8"	"EH domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Ehd2 PE=1 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"783.89514"	"1566.78301"	"1566.78173"	"0.82"	"0.00064"	"13/96"	"13"	"96"	"332551.106079102"	"HCD"	"MS2"	"35.76012"	"25.9"	"100.000"	"54.0012"	"16980"	"16980"	"16958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.8"	""	"22.4"	""	"26.9"	""	"54.7"	""	"56.6"	"54.6"	""	"738"	"14"	"35.000"	"28.000"	"1.45554744465778"	"19"	"0.0001991"	"0.004865"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTMNLGGSLTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.90820"	"1566.80913"	"1566.81072"	"-1.02"	"-0.00080"	"17/142"	"17"	"142"	"451098.012634277"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"55.3022"	"17477"	"17477"	"17450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.8"	""	"48.3"	""	"49.9"	""	"43.3"	""	"61.1"	"54.8"	""	"895"	"37"	"36.000"	"29.000"	"0.00874566906459488"	"15"	"0.0001991"	"0.002158"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTMNLGGSLTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"783.90826"	"1566.80925"	"1566.81072"	"-0.94"	"-0.00073"	"12/142"	"12"	"142"	"990082.908630371"	"HCD"	"MS2"	"0"	"62.8"	"100.000"	"55.2634"	"17495"	"17495"	"17474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.6"	""	"96.0"	""	"88.3"	""	"78.4"	""	"113.2"	"116.8"	""	"898"	"87"	"36.000"	"29.000"	"9.86839082880388E-08"	"21"	"0"	"1.748E-09"	"1.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTMNLGGSLTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"522.94135"	"1566.80948"	"1566.81072"	"-0.79"	"-0.00041"	"8/142"	"8"	"142"	"1404411.9050293"	"HCD"	"MS2"	"52.75963"	"35.6"	"100.000"	"55.5671"	"17585"	"17585"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.6"	""	"45.6"	""	"50.6"	""	"53.6"	""	"67.0"	"64.2"	""	"899"	"25"	"36.000"	"29.000"	"0.152661560029389"	"20"	"0.0001991"	"0.002285"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTMNLGGSLTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9880"	"0.0000"	"1"	"1"	"1"	"783.90845"	"1566.80962"	"1566.81072"	"-0.70"	"-0.00055"	"12/142"	"12"	"142"	"601390.463378906"	"HCD"	"MS2"	"0"	"40.4"	"100.000"	"54.9711"	"17376"	"17376"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.6"	""	"59.7"	""	"69.4"	""	"42.4"	""	"60.6"	"74.8"	""	"899"	"83"	"36.000"	"29.000"	"2.11217401818044E-07"	"19"	"0"	"2.565E-08"	"1.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDSIPGFEFNR"	"[K].gVDSIPGFEFNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"783.90881"	"1566.81035"	"1566.81137"	"-0.65"	"-0.00051"	"6/102"	"6"	"102"	"263134.856323242"	"HCD"	"MS2"	"11.71439"	"19.3"	"100.000"	"105.6818"	"37850"	"37850"	"37834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.8"	""	"26.1"	""	"33.6"	""	"26.7"	""	"31.9"	"32.4"	""	"890"	"16"	"36.000"	"29.000"	"1.24268200935062"	"18"	"0.0001991"	"0.004558"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDSIPGFEFNR"	"[K].gVDSIPGFEFNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"783.90906"	"1566.81084"	"1566.81137"	"-0.34"	"-0.00027"	"4/102"	"4"	"102"	"136676.608276367"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"105.9967"	"37975"	"37975"	"37967"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"8.2"	""	"11.5"	""	"16.6"	""	"21.8"	"18.4"	""	"888"	"8"	"36.000"	"29.000"	"6.40299216077041"	"15"	"0.0073"	"0.09251"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTMNLGGSLTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9765"	"0.0000"	"1"	"1"	"1"	"783.90912"	"1566.81096"	"1566.81072"	"0.15"	"0.00012"	"13/142"	"13"	"142"	"1337854.95397949"	"HCD"	"MS2"	"0"	"76.0"	"100.000"	"55.5950"	"17596"	"17596"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.6"	""	"123.1"	""	"108.8"	""	"83.2"	"0.4"	"131.1"	"135.5"	""	"888"	"85"	"36.000"	"29.000"	"1.44006790103111E-07"	"20"	"0"	"4.496E-10"	"1.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDSIPGFEFNR"	"[K].gVDSIPGFEFNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"783.90967"	"1566.81206"	"1566.81137"	"0.44"	"0.00034"	"6/102"	"6"	"102"	"211532.312683105"	"HCD"	"MS2"	"24.92407"	"16.5"	"100.000"	"105.9227"	"37965"	"37965"	"37944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"20.3"	""	"20.1"	""	"27.2"	""	"36.0"	"28.9"	""	"881"	"20"	"36.000"	"29.000"	"0.44355340012922"	"16"	"0.0001686"	"0.001884"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDSIPGFEFNR"	"[K].gVDSIPGFEFNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.90973"	"1566.81218"	"1566.81137"	"0.52"	"0.00040"	"6/102"	"6"	"102"	"158503.728759766"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"106.2122"	"38080"	"38080"	"38068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"14.4"	""	"14.3"	""	"19.3"	""	"23.8"	"22.8"	""	"881"	"12"	"36.000"	"29.000"	"2.98501084102503"	"13"	"0.00329"	"0.03573"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEEFNIEK"	"[K].aEEEFNIEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.7955"	"0.0000"	"1"	"1"	"1"	"783.92371"	"1566.84014"	"1566.84156"	"-0.91"	"-0.00071"	"8/82"	"8"	"82"	"350063.919311523"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"77.4887"	"26473"	"26473"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"37.1"	""	"48.7"	""	"58.6"	""	"65.9"	"64.3"	""	"891"	"44"	"36.000"	"29.000"	"0.001666662670752"	"24"	"0"	"6.35E-05"	"0.694"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEEFNIEK"	"[K].aEEEFNIEk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"Q6PCU2"	"V-type proton ATPase subunit E 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1e1 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"783.92383"	"1566.84038"	"1566.84156"	"-0.75"	"-0.00059"	"7/82"	"7"	"82"	"281799.188476563"	"HCD"	"MS2"	"37.16593"	"30.2"	"100.000"	"77.5007"	"26506"	"26506"	"26489"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.8"	""	"37.5"	""	"45.5"	""	"46.8"	""	"57.8"	"66.4"	""	"890"	"35"	"36.000"	"29.000"	"0.0145666609221083"	"19"	"0"	"0.0002301"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPMVmDAk.[A]"	"N-Term(TMT6plex); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"522.95911"	"1566.86277"	"1566.86356"	"-0.51"	"-0.00026"	"8/86"	"8"	"86"	"868654.024597168"	"HCD"	"MS2"	"68.03905"	"29.5"	"100.000"	"68.0174"	"22665"	"22665"	"22641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.4"	""	"37.4"	""	"37.6"	""	"49.4"	""	"49.6"	"55.8"	""	"908"	"16"	"36.000"	"29.000"	"1.04245148624301"	"19"	"0.0001991"	"0.00508"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTGTLYIAESR"	"[K].gLGTGTLYIAESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04753"	"Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1"	"Q04753"	"Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.93817"	"1566.86907"	"1566.86889"	"0.11"	"0.00009"	"4/112"	"4"	"112"	"166676.911865234"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"88.9883"	"31115"	"31115"	"31089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"18.2"	""	"18.0"	""	"26.5"	""	"27.7"	"23.0"	""	"854"	"9"	"36.000"	"29.000"	"4.93659927416027"	"13"	"0.002711"	"0.02865"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLGTGTLYIAESR"	"[K].gLGTGTLYIAESR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04753"	"Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1"	"Q04753"	"Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"783.93823"	"1566.86919"	"1566.86889"	"0.19"	"0.00015"	"7/112"	"7"	"112"	"158265.774047852"	"HCD"	"MS2"	"9.737079"	"12.0"	"100.000"	"88.9503"	"31139"	"31139"	"31116"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"15.3"	""	"15.7"	""	"21.0"	""	"22.4"	"22.6"	""	"859"	"6"	"36.000"	"29.000"	"12.0493374750026"	"13"	"0.003529"	"0.03894"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSITEHPK"	"[K].tPVSITEHPk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"522.97949"	"1566.92392"	"1566.92556"	"-1.05"	"-0.00055"	"9/84"	"9"	"84"	"6837203.1204834"	"HCD"	"MS2"	"8.730676"	"189.5"	"100.000"	"43.1000"	"12518"	"12518"	"12498"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"228.5"	""	"236.5"	""	"238.3"	""	"339.0"	""	"383.4"	"376.3"	""	"696"	"28"	"35.000"	"28.000"	"0.0505334842920534"	"19"	"9.9E-05"	"0.0006033"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPVSITEHPK"	"[K].tPVSITEHPk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"522.97992"	"1566.92521"	"1566.92556"	"-0.23"	"-0.00012"	"7/84"	"7"	"84"	"6951581.25732422"	"HCD"	"MS2"	"24.32282"	"176.3"	"100.000"	"43.0078"	"12515"	"12515"	"12491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.5"	""	"220.5"	""	"225.9"	""	"306.0"	""	"336.0"	"346.9"	""	"699"	"33"	"35.000"	"28.000"	"0.0194288537916006"	"20"	"0"	"0.0002232"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMNEFR"	"[K].gISQEQMNEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"784.38977"	"1567.77226"	"1567.77361"	"-0.86"	"-0.00067"	"9/106"	"9"	"106"	"623093.673339844"	"HCD"	"MS2"	"14.23029"	"52.2"	"100.000"	"62.8139"	"20555"	"20555"	"20536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.6"	""	"59.8"	""	"70.5"	""	"63.2"	""	"105.0"	"116.3"	""	"726"	"48"	"35.000"	"28.000"	"0.000567422594278666"	"17"	"0"	"4.772E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMNEFR"	"[K].gISQEQMNEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.39008"	"1567.77287"	"1567.77361"	"-0.47"	"-0.00037"	"9/106"	"9"	"106"	"644632.825012207"	"HCD"	"MS2"	"25.17006"	"53.3"	"100.000"	"62.8525"	"20538"	"20538"	"20515"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.5"	""	"66.9"	""	"59.9"	""	"69.3"	"2.2"	"119.6"	"110.4"	""	"729"	"53"	"35.000"	"28.000"	"0.000193062325298509"	"16"	"0"	"1.077E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAMEmVLTGDR.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"784.40204"	"1567.79680"	"1567.80213"	"-3.40"	"-0.00266"	"6/108"	"6"	"108"	"150542.720092773"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"95.5350"	"33790"	"33790"	"33761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"11.6"	""	"12.8"	""	"19.2"	""	"11.1"	"14.9"	""	"855"	"13"	"36.000"	"29.000"	"2.33311485616518"	"13"	"0.00192"	"0.01591"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEMVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.4839"	"0.0000"	"1"	"1"	"1"	"784.40381"	"1567.80034"	"1567.80213"	"-1.14"	"-0.00089"	"16/108"	"16"	"108"	"297908.171875"	"HCD"	"MS2"	"31.83593"	"16.5"	"100.000"	"88.0180"	"30723"	"30723"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.3"	""	"30.9"	""	"28.4"	""	"19.8"	""	"25.4"	"22.7"	""	"842"	"31"	"36.000"	"29.000"	"0.0356682741353191"	"14"	"0.002035"	"0.01777"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEMVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"523.27173"	"1567.80063"	"1567.80213"	"-0.96"	"-0.00050"	"10/108"	"10"	"108"	"354870.887084961"	"HCD"	"MS2"	"59.72509"	"9.2"	"100.000"	"87.7424"	"30649"	"30649"	"30620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"12.1"	""	"11.9"	""	"14.9"	""	"16.6"	"18.7"	""	"857"	"32"	"36.000"	"29.000"	"0.0269743399354309"	"21"	"0"	"8.512E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEMVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.4062"	"0.0000"	"1"	"1"	"1"	"784.40442"	"1567.80156"	"1567.80213"	"-0.36"	"-0.00028"	"14/108"	"14"	"108"	"272145.091186523"	"HCD"	"MS2"	"27.94741"	"15.4"	"100.000"	"87.9434"	"30730"	"30730"	"30710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"27.8"	""	"31.9"	""	"17.1"	""	"21.0"	"25.3"	""	"857"	"32"	"36.000"	"29.000"	"0.0285069547432446"	"14"	"0.001615"	"0.01373"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAMEmVLTGDR.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"784.40472"	"1567.80217"	"1567.80213"	"0.03"	"0.00002"	"7/108"	"7"	"108"	"272741.517333984"	"HCD"	"MS2"	"8.491493"	"16.4"	"100.000"	"95.8192"	"33872"	"33872"	"33850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"26.8"	""	"29.9"	""	"22.5"	""	"26.9"	"29.5"	""	"849"	"28"	"36.000"	"29.000"	"0.0683719072133176"	"15"	"0.0001991"	"0.002271"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAMEmVLTGDR.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"784.40509"	"1567.80290"	"1567.80213"	"0.49"	"0.00039"	"7/108"	"7"	"108"	"235746.792175293"	"HCD"	"MS2"	"7.135693"	"14.1"	"100.000"	"95.8330"	"33910"	"33910"	"33891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"24.9"	""	"19.4"	""	"18.1"	""	"25.2"	"23.4"	""	"863"	"27"	"36.000"	"29.000"	"0.0807199343567843"	"14"	"0.0001991"	"0.003708"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEMVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"523.27258"	"1567.80320"	"1567.80213"	"0.68"	"0.00036"	"8/108"	"8"	"108"	"324278.882385254"	"HCD"	"MS2"	"44.78606"	"9.1"	"100.000"	"87.9164"	"30683"	"30683"	"30663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"10.2"	""	"9.1"	""	"18.3"	""	"16.5"	"18.8"	""	"865"	"27"	"36.000"	"29.000"	"0.091408400972935"	"21"	"0"	"0.0001383"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITQGPYENR"	"[K].nFITQGPYENR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"784.40753"	"1567.80779"	"1567.80662"	"0.74"	"0.00058"	"12/110"	"12"	"110"	"498590.91204834"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"65.9285"	"21788"	"21788"	"21769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"37.8"	""	"43.6"	""	"53.0"	""	"60.1"	"66.6"	""	"863"	"31"	"36.000"	"29.000"	"0.0306888631141411"	"20"	"0.0001991"	"0.00211"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITQGPYENR"	"[K].nFITQGPYENR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"784.40778"	"1567.80828"	"1567.80662"	"1.05"	"0.00083"	"9/110"	"9"	"110"	"681007.049377441"	"HCD"	"MS2"	"0"	"42.4"	"100.000"	"65.8838"	"21803"	"21803"	"21784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"53.6"	""	"59.2"	""	"64.3"	"1.5"	"80.8"	"73.3"	""	"864"	"38"	"36.000"	"29.000"	"0.00643403985571115"	"21"	"0"	"0.0001153"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITQGPYENR"	"[K].nFITQGPYENR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"784.40851"	"1567.80974"	"1567.80662"	"1.99"	"0.00156"	"7/110"	"7"	"110"	"510452.473388672"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"65.6037"	"21656"	"21656"	"21631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"40.6"	""	"51.6"	""	"47.0"	"0.9"	"59.6"	"58.3"	""	"856"	"31"	"36.000"	"29.000"	"0.0307215956664143"	"22"	"9.9E-05"	"0.0009694"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFITQGPYENR"	"[K].nFITQGPYENR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"P62815"	"V-type proton ATPase subunit B, brain isoform OS=Rattus norvegicus OX=10116 GN=Atp6v1b2 PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"784.41034"	"1567.81340"	"1567.80662"	"4.32"	"0.00339"	"12/110"	"12"	"110"	"485842.788635254"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"65.5774"	"21679"	"21679"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.4"	""	"44.2"	""	"40.0"	""	"54.1"	""	"65.2"	"61.6"	""	"865"	"26"	"36.000"	"29.000"	"0.108889527125571"	"22"	"0.0001991"	"0.002994"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEAWFNEK"	"[K].dAEAWFNEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"523.27667"	"1567.81546"	"1567.81568"	"-0.14"	"-0.00007"	"8/82"	"8"	"82"	"1563458.02044678"	"HCD"	"MS2"	"6.518588"	"40.5"	"100.000"	"97.0660"	"34407"	"34407"	"34394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.7"	""	"47.6"	""	"71.2"	""	"38.5"	""	"48.1"	"51.7"	""	"855"	"30"	"36.000"	"29.000"	"0.0397133130348423"	"26"	"0.001453"	"0.01163"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEAWFNEK"	"[K].dAEAWFNEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"784.41138"	"1567.81548"	"1567.81568"	"-0.13"	"-0.00010"	"14/82"	"14"	"82"	"315027.100646973"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"97.2204"	"34439"	"34439"	"34420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.7"	""	"36.1"	""	"57.8"	""	"33.4"	"2.1"	"30.9"	"49.5"	""	"855"	"49"	"36.000"	"29.000"	"0.000529585540741733"	"23"	"0"	"3.417E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEAWFNEK"	"[K].dAEAWFNEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"523.27698"	"1567.81638"	"1567.81568"	"0.45"	"0.00023"	"9/82"	"9"	"82"	"1377405.94616699"	"HCD"	"MS2"	"10.13656"	"35.2"	"100.000"	"96.9735"	"34339"	"34339"	"34322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.3"	""	"51.3"	""	"55.1"	""	"33.3"	""	"45.5"	"46.6"	""	"840"	"26"	"36.000"	"29.000"	"0.095995149741768"	"22"	"0.0001991"	"0.002011"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEAWFNEK"	"[K].dAEAWFNEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"784.41193"	"1567.81658"	"1567.81568"	"0.57"	"0.00045"	"12/82"	"12"	"82"	"256323.96875"	"HCD"	"MS2"	"3.848782"	"23.8"	"100.000"	"97.3129"	"34507"	"34507"	"34490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.9"	""	"31.1"	""	"39.4"	""	"29.0"	""	"26.5"	"32.7"	""	"842"	"42"	"36.000"	"29.000"	"0.00293279762440633"	"19"	"0"	"0.0003193"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEAWFNEK"	"[K].dAEAWFNEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"784.41205"	"1567.81682"	"1567.81568"	"0.73"	"0.00057"	"16/82"	"16"	"82"	"710434.469543457"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"96.9947"	"34379"	"34379"	"34362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.0"	""	"83.0"	""	"109.8"	""	"69.6"	"1.9"	"61.3"	"81.3"	""	"848"	"54"	"36.000"	"29.000"	"0.000157168626035812"	"25"	"0"	"1.889E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEAWFNEK"	"[K].dAEAWFNEk.[S]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"0"	"2"	"2"	"0.9020"	"0.0000"	"1"	"1"	"1"	"784.41211"	"1567.81694"	"1567.81568"	"0.81"	"0.00063"	"8/82"	"8"	"82"	"767747.586181641"	"HCD"	"MS2"	"0"	"75.1"	"100.000"	"96.9320"	"34323"	"34323"	"34306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.6"	"2.0"	"91.2"	""	"124.4"	""	"74.0"	"0.4"	"63.0"	"87.1"	""	"847"	"51"	"36.000"	"29.000"	"0.000362120752906663"	"20"	"0"	"0.0001479"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGGFPEDSSK"	"[R].vSGGFPEDSSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"784.42102"	"1567.83476"	"1567.83681"	"-1.30"	"-0.00102"	"5/96"	"5"	"96"	"204434.622558594"	"HCD"	"MS2"	"100"	"19.7"	"100.000"	"57.0522"	"18181"	"18181"	"18156"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"19.5"	""	"16.4"	""	"42.8"	""	"46.9"	"42.5"	""	"898"	"15"	"36.000"	"29.000"	"1.42970468725503"	"14"	"0.005712"	"0.07095"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGGFPEDSSK"	"[R].vSGGFPEDSSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.42194"	"1567.83660"	"1567.83681"	"-0.14"	"-0.00011"	"8/96"	"8"	"96"	"172865.768188477"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"57.1917"	"18272"	"18272"	"18247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"17.1"	""	"18.9"	""	"27.3"	""	"32.0"	"35.3"	""	"869"	"10"	"36.000"	"29.000"	"4.09251029689175"	"13"	"0.009514"	"0.1267"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGGFPEDSSK"	"[R].vSGGFPEDSSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.42212"	"1567.83696"	"1567.83681"	"0.10"	"0.00008"	"5/96"	"5"	"96"	"146796.863098145"	"HCD"	"MS2"	"100"	"15.4"	"100.000"	"56.5329"	"18005"	"18005"	"17992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"17.8"	""	"12.2"	""	"25.1"	""	"41.1"	"33.7"	""	"887"	"12"	"36.000"	"29.000"	"3.04014028431755"	"13"	"0.00455"	"0.05384"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGGFPEDSSK"	"[R].vSGGFPEDSSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.42218"	"1567.83708"	"1567.83681"	"0.18"	"0.00014"	"9/96"	"9"	"96"	"205428.593200684"	"HCD"	"MS2"	"100"	"20.1"	"100.000"	"56.8859"	"18148"	"18148"	"18125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"15.1"	""	"19.6"	""	"46.9"	""	"40.8"	"49.7"	""	"889"	"16"	"36.000"	"29.000"	"1.08360690876491"	"14"	"0.002189"	"0.02136"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSGGFPEDSSK"	"[R].vSGGFPEDSSk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"784.42261"	"1567.83794"	"1567.83681"	"0.72"	"0.00057"	"9/96"	"9"	"96"	"202293.22454834"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"57.3668"	"18308"	"18308"	"18284"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"29.0"	""	"16.4"	""	"39.9"	"2.2"	"43.9"	"37.8"	""	"897"	"19"	"36.000"	"29.000"	"0.531817283552971"	"15"	"0.004392"	"0.05211"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDGENYAIK"	"[K].aEDGENYAIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"Q6PEC1"	"Tubulin-specific chaperone A OS=Rattus norvegicus OX=10116 GN=Tbca PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"784.42303"	"1567.83879"	"1567.83681"	"1.27"	"0.00099"	"8/86"	"8"	"86"	"227640.995849609"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"52.8874"	"16526"	"16526"	"16498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.3"	""	"24.6"	""	"23.7"	""	"34.5"	"1.1"	"49.0"	"43.0"	""	"883"	"33"	"36.000"	"29.000"	"0.0199035575055054"	"20"	"0.000264"	"0.006135"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"523.29559"	"1567.87223"	"1567.87319"	"-0.62"	"-0.00032"	"8/92"	"8"	"92"	"3354382.45440674"	"HCD"	"MS2"	"24.54249"	"105.2"	"100.000"	"61.8492"	"20163"	"20163"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.4"	""	"125.1"	""	"125.5"	""	"176.4"	"0.5"	"233.1"	"211.3"	""	"918"	"52"	"36.000"	"29.000"	"0.000287615763884602"	"19"	"0"	"3.725E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STAPAVAYDSK"	"[R].sTAPAVAYDSk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q562A2"	"Zinc finger RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Zfr PE=1 SV=2"	"Q562A2"	"Zinc finger RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Zfr PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.43976"	"1567.87224"	"1567.87319"	"-0.61"	"-0.00048"	"5/98"	"5"	"98"	"132457.724121094"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"49.5006"	"15116"	"15116"	"15090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"13.1"	""	"12.5"	""	"17.8"	""	"16.4"	"22.8"	""	"918"	"2"	"36.000"	"29.000"	"29.6355291126907"	"13"	"0.009382"	"0.1226"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"784.43976"	"1567.87224"	"1567.87319"	"-0.61"	"-0.00048"	"9/92"	"9"	"92"	"2299236.39727783"	"HCD"	"MS2"	"3.438977"	"179.6"	"100.000"	"61.7819"	"20136"	"20136"	"20118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"248.2"	""	"220.3"	""	"223.1"	""	"316.2"	"0.9"	"352.1"	"342.8"	""	"918"	"60"	"36.000"	"29.000"	"4.41380035778102E-05"	"19"	"0"	"7.85E-06"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"784.43988"	"1567.87248"	"1567.87319"	"-0.45"	"-0.00035"	"9/92"	"9"	"92"	"2045523.23852539"	"HCD"	"MS2"	"3.31995"	"166.0"	"100.000"	"61.8816"	"20143"	"20143"	"20127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"245.1"	""	"180.2"	""	"210.1"	""	"283.3"	""	"342.8"	"325.3"	""	"914"	"62"	"36.000"	"29.000"	"2.97109268486793E-05"	"22"	"0"	"7.019E-06"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"784.44000"	"1567.87273"	"1567.87319"	"-0.30"	"-0.00023"	"9/92"	"9"	"92"	"842276.346984863"	"HCD"	"MS2"	"20.48198"	"73.5"	"100.000"	"61.5987"	"20029"	"20029"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.6"	""	"98.0"	""	"91.9"	""	"122.3"	""	"132.2"	"144.7"	""	"909"	"63"	"36.000"	"29.000"	"2.41286979902984E-05"	"20"	"0"	"5.096E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDGQASLYK"	"[K].vEDGQASLYk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"784.44019"	"1567.87309"	"1567.87319"	"-0.06"	"-0.00005"	"9/92"	"9"	"92"	"415043.871826172"	"HCD"	"MS2"	"36.28278"	"37.1"	"100.000"	"61.4867"	"20019"	"20019"	"19990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"50.0"	""	"52.7"	""	"58.9"	"1.4"	"63.0"	"69.2"	""	"899"	"46"	"36.000"	"29.000"	"0.00119324520010801"	"21"	"0"	"1.627E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFTIETEGK"	"[K].gEFTIETEGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.7679"	"0.0000"	"1"	"1"	"1"	"784.93158"	"1568.85588"	"1568.85721"	"-0.85"	"-0.00066"	"15/84"	"15"	"84"	"328087.695495605"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"75.1759"	"25569"	"25569"	"25550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"36.7"	""	"46.2"	""	"55.3"	"0.9"	"65.7"	"67.4"	""	"862"	"56"	"36.000"	"29.000"	"0.000106041843738763"	"29"	"0"	"1.553E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEFTIETEGK"	"[K].gEFTIETEGk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"Q5I0G4"	"Glycine--tRNA ligase (Fragment) OS=Rattus norvegicus OX=10116 GN=Gars PE=1 SV=1"	"0"	"2"	"2"	"0.7833"	"0.0000"	"1"	"1"	"1"	"784.93158"	"1568.85588"	"1568.85721"	"-0.85"	"-0.00066"	"16/84"	"16"	"84"	"359646.655334473"	"HCD"	"MS2"	"5.828738"	"32.2"	"100.000"	"75.0435"	"25484"	"25484"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.7"	""	"40.8"	""	"48.6"	""	"49.8"	""	"59.2"	"66.0"	""	"862"	"60"	"36.000"	"29.000"	"4.66098033009411E-05"	"29"	"0"	"2.793E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.6981"	"0.0000"	"1"	"1"	"1"	"523.63263"	"1568.88333"	"1568.88454"	"-0.77"	"-0.00040"	"14/102"	"14"	"102"	"1991094.25067139"	"HCD"	"MS2"	"28.87189"	"22.3"	"100.000"	"74.2091"	"25147"	"25147"	"25126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"30.4"	""	"31.6"	""	"32.2"	""	"46.0"	"43.2"	""	"854"	"53"	"36.000"	"29.000"	"0.000203436031365913"	""	"0"	"5.786E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"3"	"3"	"0.6140"	"0.0000"	"1"	"1"	"1"	"523.63263"	"1568.88333"	"1568.88454"	"-0.77"	"-0.00040"	"15/102"	"15"	"102"	"2189880.86682129"	"HCD"	"MS2"	"24.13951"	"22.0"	"100.000"	"74.3552"	"25236"	"25236"	"25217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.5"	""	"34.3"	""	"25.4"	""	"40.3"	""	"37.9"	"40.3"	""	"854"	"57"	"36.000"	"29.000"	"8.19271552266214E-05"	""	"0"	"2.113E-06"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7170"	"0.0000"	"1"	"1"	"1"	"784.94556"	"1568.88384"	"1568.88454"	"-0.45"	"-0.00035"	"11/102"	"11"	"102"	"714550.943969727"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"74.0639"	"25088"	"25088"	"25065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"38.2"	""	"36.5"	""	"47.0"	""	"37.8"	"47.9"	""	"840"	"53"	"36.000"	"29.000"	"0.000225034596155603"	""	"0"	"2.364E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"784.94586"	"1568.88445"	"1568.88454"	"-0.06"	"-0.00005"	"7/102"	"7"	"102"	"700573.337402344"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"74.1687"	"25160"	"25160"	"25142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.7"	""	"36.9"	""	"45.0"	""	"42.9"	""	"50.0"	"46.3"	""	"826"	"51"	"36.000"	"29.000"	"0.000295086982669187"	"28"	"0"	"4.199E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.4348"	"0.0000"	"1"	"1"	"1"	"784.94629"	"1568.88530"	"1568.88454"	"0.49"	"0.00038"	"5/102"	"5"	"102"	"218380.780944824"	"HCD"	"MS2"	"24.71265"	"13.7"	"100.000"	"73.7436"	"24958"	"24958"	"24932"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"19.7"	""	"17.1"	""	"23.1"	""	"27.7"	"26.9"	""	"855"	"23"	"36.000"	"29.000"	"0.22076799786381"	"27"	"0.0001991"	"0.002335"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSVISVEEPPQR"	"[K].vSVISVEEPPQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"Q68FU3"	"Electron transfer flavoprotein subunit beta OS=Rattus norvegicus OX=10116 GN=Etfb PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"784.94659"	"1568.88591"	"1568.88454"	"0.88"	"0.00069"	"6/102"	"6"	"102"	"175889.335266113"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"73.8485"	"25030"	"25030"	"25006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"17.7"	""	"19.4"	""	"21.1"	""	"21.6"	"23.4"	""	"827"	"22"	"36.000"	"29.000"	"0.250885472284847"	"25"	"0.0001991"	"0.00361"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGQGDVPAPK"	"[K].lEGQGDVPAPk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"784.95514"	"1568.90300"	"1568.90483"	"-1.16"	"-0.00091"	"11/102"	"11"	"102"	"261953.604553223"	"HCD"	"MS2"	"29.80552"	"24.6"	"100.000"	"59.1476"	"19070"	"19070"	"19045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"24.7"	""	"29.0"	""	"36.6"	""	"55.4"	"51.9"	""	"728"	"30"	"35.000"	"28.000"	"0.0407475389582043"	"22"	"0.0001686"	"0.001606"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEGQGDVPAPK"	"[K].lEGQGDVPAPk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"B0BN85"	"Protein SGT1 homolog OS=Rattus norvegicus OX=10116 GN=Sugt1 PE=2 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"784.95642"	"1568.90557"	"1568.90483"	"0.47"	"0.00037"	"6/102"	"6"	"102"	"214009.580871582"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"59.3663"	"19124"	"19124"	"19098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"26.5"	""	"24.7"	""	"34.4"	""	"35.2"	"42.8"	""	"718"	"23"	"35.000"	"28.000"	"0.163717252826515"	"19"	"0.002711"	"0.02828"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"523.64795"	"1568.92929"	"1568.92998"	"-0.44"	"-0.00023"	"6/86"	"6"	"86"	"1496625.1628418"	"HCD"	"MS2"	"9.078786"	"35.3"	"100.000"	"98.9102"	"35122"	"35122"	"35103"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.2"	""	"35.9"	""	"42.6"	""	"63.1"	"0.3"	"85.6"	"67.0"	""	"582"	"48"	"34.000"	"27.000"	"0.000465471386326868"	"27"	"0"	"1.399E-05"	"0.83"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"784.96844"	"1568.92961"	"1568.92998"	"-0.23"	"-0.00018"	"7/86"	"7"	"86"	"228030.083496094"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"99.1164"	"35235"	"35235"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"14.3"	""	"18.5"	""	"17.2"	""	"26.9"	"25.0"	""	"581"	"54"	"34.000"	"27.000"	"0.000107682749677838"	"20"	"0"	"5.512E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"523.64807"	"1568.92966"	"1568.92998"	"-0.20"	"-0.00011"	"5/86"	"5"	"86"	"1241469.62792969"	"HCD"	"MS2"	"12.63595"	"28.5"	"100.000"	"98.8435"	"35125"	"35125"	"35110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"30.4"	""	"36.0"	""	"52.7"	""	"66.1"	"54.6"	""	"574"	"36"	"34.000"	"27.000"	"0.0064547867187487"	""	"0"	"0.0001886"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"784.96930"	"1568.93132"	"1568.92998"	"0.86"	"0.00067"	"7/86"	"7"	"86"	"342690.872802734"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"99.0115"	"35163"	"35163"	"35145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"22.6"	""	"23.7"	""	"39.8"	"0.5"	"41.4"	"46.2"	""	"577"	"59"	"34.000"	"27.000"	"3.87387691288274E-05"	"22"	"0"	"5.601E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"784.96936"	"1568.93144"	"1568.92998"	"0.93"	"0.00073"	"7/86"	"7"	"86"	"319168.75"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"98.8017"	"35109"	"35109"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"16.0"	""	"19.8"	""	"34.1"	""	"37.4"	"33.1"	""	"577"	"52"	"34.000"	"27.000"	"0.000200514515624368"	"21"	"0"	"4.794E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPLVDVVDPK"	"[K].ePLVDVVDPk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"Q63009"	"Protein arginine N-methyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Prmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"784.97009"	"1568.93291"	"1568.92998"	"1.87"	"0.00146"	"6/86"	"6"	"86"	"200081.641906738"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"98.7251"	"35048"	"35048"	"35026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"16.1"	""	"14.0"	""	"21.7"	""	"25.1"	"22.9"	""	"563"	"37"	"34.000"	"27.000"	"0.00524177528970597"	"18"	"0"	"0.0003318"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLEPVASPAK"	"[K].aQLEPVASPAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"523.65131"	"1568.93937"	"1568.94121"	"-1.18"	"-0.00062"	"13/106"	"13"	"106"	"2098842.63378906"	"HCD"	"MS2"	"26.71936"	"72.9"	"100.000"	"59.9741"	"19404"	"19404"	"19382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.5"	""	"117.1"	""	"114.5"	""	"96.5"	""	"115.8"	"129.9"	""	"510"	"34"	"34.000"	"27.000"	"0.00906859862350912"	"16"	"0"	"6.612E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLEPVASPAK"	"[K].aQLEPVASPAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.97357"	"1568.93987"	"1568.94121"	"-0.86"	"-0.00067"	"7/106"	"7"	"106"	"419609.261291504"	"HCD"	"MS2"	"44.94578"	"36.8"	"100.000"	"59.7092"	"19297"	"19297"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.2"	""	"62.7"	""	"60.9"	""	"45.0"	""	"61.6"	"63.8"	""	"512"	"46"	"34.000"	"27.000"	"0.000621212184341098"	"15"	"9.9E-05"	"0.0004823"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLEPVASPAK"	"[K].aQLEPVASPAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.97357"	"1568.93987"	"1568.94121"	"-0.86"	"-0.00067"	"16/106"	"16"	"106"	"487472.508789063"	"HCD"	"MS2"	"0"	"38.5"	"100.000"	"59.8796"	"19333"	"19333"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.1"	""	"59.6"	""	"60.7"	""	"50.6"	""	"60.3"	"73.2"	""	"512"	"54"	"34.000"	"27.000"	"9.42410172524879E-05"	"16"	"0"	"9.751E-06"	"0.862"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLEPVASPAK"	"[K].aQLEPVASPAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.65155"	"1568.94010"	"1568.94121"	"-0.71"	"-0.00037"	"14/106"	"14"	"106"	"2156356.73895264"	"HCD"	"MS2"	"44.25395"	"75.0"	"100.000"	"60.1516"	"19443"	"19443"	"19422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.6"	""	"125.8"	""	"107.9"	""	"100.2"	""	"123.7"	"127.7"	""	"511"	"35"	"34.000"	"27.000"	"0.00863755656506283"	"15"	"0"	"8.503E-06"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQLEPVASPAK"	"[K].aQLEPVASPAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.97400"	"1568.94072"	"1568.94121"	"-0.31"	"-0.00025"	"8/106"	"8"	"106"	"497135.629638672"	"HCD"	"MS2"	"13.21533"	"40.2"	"100.000"	"60.0548"	"19437"	"19437"	"19413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.6"	""	"61.9"	""	"57.6"	""	"51.7"	"0.6"	"71.4"	"71.9"	""	"504"	"58"	"34.000"	"27.000"	"4.16294373153711E-05"	"16"	"0"	"7.271E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.37732"	"1569.74736"	"1569.74950"	"-1.36"	"-0.00107"	"9/118"	"9"	"118"	"355180.385620117"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"72.1004"	"24319"	"24319"	"24298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.1"	""	"32.4"	""	"25.6"	""	"42.0"	"1.4"	"58.1"	"55.5"	""	"500"	"52"	"33.000"	"26.000"	"0.000153794218177467"	"16"	"0"	"8.836E-06"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.37732"	"1569.74736"	"1569.74950"	"-1.36"	"-0.00107"	"16/118"	"16"	"118"	"385221.601318359"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"71.7227"	"24139"	"24139"	"24116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"33.0"	""	"24.6"	""	"50.8"	"0.8"	"63.9"	"59.5"	""	"500"	"38"	"33.000"	"26.000"	"0.00432454089803776"	"15"	"0"	"7.686E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.37744"	"1569.74761"	"1569.74950"	"-1.21"	"-0.00095"	"7/118"	"7"	"118"	"254692.212219238"	"HCD"	"MS2"	"0"	"18.5"	"100.000"	"71.7822"	"24194"	"24194"	"24171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"20.2"	""	"17.4"	""	"34.8"	"0.9"	"38.8"	"39.1"	""	"502"	"16"	"33.000"	"27.000"	"0.614714873703031"	"14"	"0.001951"	"0.01637"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lNGYSDAGDSWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.37830"	"1569.74932"	"1569.74950"	"-0.12"	"-0.00009"	"8/118"	"8"	"118"	"426757.991943359"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"72.0032"	"24253"	"24253"	"24238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.4"	""	"34.4"	""	"28.7"	""	"50.5"	""	"57.6"	"64.2"	""	"505"	"46"	"34.000"	"27.000"	"0.000577113697852297"	"15"	"0"	"1.474E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"523.97955"	"1569.92411"	"1569.92523"	"-0.72"	"-0.00037"	"8/96"	"8"	"96"	"603333.538208008"	"HCD"	"MS2"	"14.83762"	"20.0"	"100.000"	"82.9384"	"28710"	"28710"	"28688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"28.0"	""	"18.1"	""	"37.8"	""	"44.2"	"32.5"	""	"675"	"28"	"35.000"	"28.000"	"0.0533671213253754"	"23"	"9.9E-05"	"0.0004706"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"523.97955"	"1569.92411"	"1569.92523"	"-0.72"	"-0.00037"	"12/96"	"12"	"96"	"3613553.3203125"	"HCD"	"MS2"	"6.597259"	"79.7"	"100.000"	"82.5909"	"28541"	"28541"	"28523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.7"	""	"104.1"	""	"55.6"	""	"161.5"	"0.0"	"161.6"	"134.9"	""	"675"	"51"	"35.000"	"28.000"	"0.000241142510050485"	"20"	"0"	"4.919E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"785.46570"	"1569.92412"	"1569.92523"	"-0.71"	"-0.00055"	"9/96"	"9"	"96"	"2186132.67834473"	"HCD"	"MS2"	"0"	"131.4"	"100.000"	"82.5865"	"28540"	"28540"	"28523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.8"	""	"170.2"	""	"85.6"	""	"277.9"	""	"279.0"	"203.8"	""	"675"	"50"	"35.000"	"28.000"	"0.000375209457957537"	"24"	"0"	"8.28E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"523.97980"	"1569.92484"	"1569.92523"	"-0.25"	"-0.00013"	"12/96"	"12"	"96"	"4373220.35742188"	"HCD"	"MS2"	"3.681417"	"95.9"	"100.000"	"82.6342"	"28587"	"28587"	"28569"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"160.9"	""	"125.8"	""	"60.4"	""	"199.6"	""	"209.8"	"158.9"	""	"670"	"47"	"35.000"	"28.000"	"0.000628123160202584"	"19"	"0"	"4.795E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"785.46613"	"1569.92497"	"1569.92523"	"-0.16"	"-0.00013"	"6/96"	"6"	"96"	"285558.184814453"	"HCD"	"MS2"	"12.58938"	"24.4"	"100.000"	"82.9361"	"28709"	"28709"	"28688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.6"	""	"31.0"	""	"26.6"	""	"48.3"	"0.4"	"44.9"	"42.0"	""	"666"	"19"	"35.000"	"28.000"	"0.385872859599657"	"15"	"0.00455"	"0.05327"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"523.97986"	"1569.92502"	"1569.92523"	"-0.13"	"-0.00007"	"10/96"	"10"	"96"	"501799.564880371"	"HCD"	"MS2"	"19.56231"	"15.7"	"100.000"	"82.9069"	"28669"	"28669"	"28645"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"22.3"	""	"20.2"	""	"26.7"	""	"27.0"	"28.2"	""	"666"	"26"	"35.000"	"28.000"	"0.080992393502158"	"15"	"0"	"0.000319"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"523.97986"	"1569.92502"	"1569.92523"	"-0.13"	"-0.00007"	"10/96"	"10"	"96"	"1164109.88378906"	"HCD"	"MS2"	"18.87087"	"30.5"	"100.000"	"81.9917"	"28302"	"28302"	"28279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.7"	""	"44.1"	""	"23.9"	""	"62.7"	""	"60.8"	"45.0"	""	"666"	"29"	"35.000"	"28.000"	"0.0426033974284455"	"15"	"0"	"0.0003384"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"785.46625"	"1569.92522"	"1569.92523"	"-0.01"	"-0.00001"	"9/96"	"9"	"96"	"2425604.78955078"	"HCD"	"MS2"	"0"	"138.8"	"100.000"	"82.6298"	"28586"	"28586"	"28569"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"236.7"	""	"178.5"	""	"89.8"	""	"301.9"	""	"295.0"	"214.8"	""	"674"	"47"	"35.000"	"28.000"	"0.000602046312725142"	"19"	"0"	"0.0002056"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"523.97998"	"1569.92539"	"1569.92523"	"0.10"	"0.00005"	"11/96"	"11"	"96"	"1583241.53503418"	"HCD"	"MS2"	"37.92441"	"40.8"	"100.000"	"82.0583"	"28357"	"28357"	"28334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.8"	""	"58.1"	""	"36.1"	""	"82.6"	""	"74.6"	"63.6"	""	"674"	"36"	"35.000"	"28.000"	"0.00846505727418729"	"15"	"0"	"0.0002511"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.9608"	"0.0000"	"1"	"1"	"1"	"523.97998"	"1569.92539"	"1569.92523"	"0.10"	"0.00005"	"12/96"	"12"	"96"	"8766640.69018555"	"HCD"	"MS2"	"6.329195"	"183.4"	"100.000"	"82.2775"	"28418"	"28418"	"28400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.3"	""	"256.6"	""	"121.1"	""	"392.9"	""	"357.5"	"280.5"	""	"674"	"51"	"35.000"	"28.000"	"0.000259794469074713"	"18"	"0"	"7.2E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8679"	"0.0000"	"1"	"1"	"1"	"785.46643"	"1569.92558"	"1569.92523"	"0.23"	"0.00018"	"9/96"	"9"	"96"	"542271.051269531"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"81.9894"	"28301"	"28301"	"28279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"51.9"	""	"20.1"	""	"71.5"	"1.8"	"66.0"	"46.3"	""	"674"	"53"	"35.000"	"28.000"	"0.000176047515692703"	"23"	"0"	"1.925E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"785.46643"	"1569.92558"	"1569.92523"	"0.23"	"0.00018"	"9/96"	"9"	"96"	"5187680.76403809"	"HCD"	"MS2"	"0"	"287.3"	"100.000"	"82.2731"	"28417"	"28417"	"28400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"514.0"	""	"420.2"	""	"170.8"	""	"624.6"	""	"586.7"	"406.6"	""	"674"	"39"	"35.000"	"28.000"	"0.00383380395322496"	"19"	"0"	"2.132E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"785.46661"	"1569.92595"	"1569.92523"	"0.46"	"0.00036"	"9/96"	"9"	"96"	"727829.030578613"	"HCD"	"MS2"	"6.542062"	"47.9"	"100.000"	"82.0560"	"28356"	"28356"	"28334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.2"	""	"80.8"	""	"30.2"	""	"99.6"	"0.4"	"83.4"	"66.2"	""	"674"	"50"	"35.000"	"28.000"	"0.000372074494906999"	"22"	"0"	"4.659E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSILPPLDK"	"[R].dNSILPPLDk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"785.46674"	"1569.92620"	"1569.92523"	"0.62"	"0.00048"	"7/104"	"7"	"104"	"123453.29119873"	"HCD"	"MS2"	"34.57386"	"9.0"	"100.000"	"99.6195"	"35438"	"35438"	"35412"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"6.5"	""	"7.5"	""	"17.5"	""	"18.7"	"24.8"	""	"667"	"15"	"35.000"	"28.000"	"0.997920256308831"	"14"	"0.006577"	"0.0816"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSILPPLDK"	"[R].dNSILPPLDk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.46674"	"1569.92620"	"1569.92523"	"0.62"	"0.00048"	"6/104"	"6"	"104"	"147791.832214355"	"HCD"	"MS2"	"41.65523"	"8.3"	"100.000"	"99.6252"	"35412"	"35412"	"35383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"9.5"	""	"9.6"	""	"12.2"	""	"14.4"	"24.2"	""	"667"	"10"	"35.000"	"28.000"	"3.04155614925196"	"13"	"0.009005"	"0.1166"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"523.98035"	"1569.92649"	"1569.92523"	"0.80"	"0.00042"	"12/96"	"12"	"96"	"9640156.64111328"	"HCD"	"MS2"	"6.016399"	"205.3"	"100.000"	"82.3513"	"28476"	"28476"	"28458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"333.9"	""	"309.9"	""	"135.5"	""	"432.8"	"2.0"	"416.9"	"315.0"	""	"639"	"51"	"35.000"	"28.000"	"0.000244045532853072"	"16"	"0"	"3.243E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIPVDSPELK"	"[KR].nIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P08932"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P08932; P08934"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Kininogen-1 OS=Rattus norvegicus OX=10116 GN=Kng1 PE=2 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"785.46692"	"1569.92656"	"1569.92523"	"0.85"	"0.00067"	"8/96"	"8"	"96"	"5270639.23394775"	"HCD"	"MS2"	"0"	"295.1"	"100.000"	"82.3468"	"28475"	"28475"	"28458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"519.0"	""	"443.8"	""	"177.2"	""	"639.6"	"1.2"	"576.7"	"437.6"	""	"639"	"38"	"35.000"	"28.000"	"0.0054887172969685"	"19"	"9.9E-05"	"0.0004608"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPVILADEIK"	"[K].gGPVILADEIk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9111"	"0.0000"	"1"	"1"	"1"	"785.48438"	"1569.96147"	"1569.96161"	"-0.09"	"-0.00007"	"13/82"	"13"	"82"	"222597.093566895"	"HCD"	"MS2"	"20.69954"	"19.9"	"100.000"	"100.6608"	"35834"	"35834"	"35803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"19.3"	""	"15.5"	""	"48.3"	""	"40.4"	"46.9"	""	"382"	"45"	"32.000"	"25.000"	"0.00067148044140905"	"20"	"9.9E-05"	"0.000799"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGPVILADEIK"	"[K].gGPVILADEIk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"Q9JHU5"	"Arfaptin-1 OS=Rattus norvegicus OX=10116 GN=Arfip1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"785.48492"	"1569.96257"	"1569.96161"	"0.61"	"0.00048"	"8/82"	"8"	"82"	"190981.317932129"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"100.7636"	"35903"	"35903"	"35877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"14.8"	""	"24.3"	""	"38.1"	""	"40.6"	"25.3"	""	"391"	"48"	"32.000"	"25.000"	"0.000288500627255437"	"18"	"0"	"0.0001064"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.87000"	"1570.73271"	"1570.73352"	"-0.51"	"-0.00040"	"9/118"	"9"	"118"	"199271.976501465"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"78.9925"	"27085"	"27085"	"27056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"13.7"	""	"15.2"	""	"20.9"	""	"26.7"	"27.1"	""	"418"	"13"	"33.000"	"26.000"	"0.944378923743587"	"13"	"0.001615"	"0.01421"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.87024"	"1570.73320"	"1570.73352"	"-0.20"	"-0.00016"	"10/118"	"10"	"118"	"474808.074462891"	"HCD"	"MS2"	"9.48508"	"33.1"	"100.000"	"79.5901"	"27327"	"27327"	"27307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"35.3"	""	"30.8"	""	"54.4"	"0.1"	"67.4"	"83.7"	""	"421"	"54"	"33.000"	"26.000"	"9.33796195475665E-05"	"16"	"0"	"5.059E-07"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"785.87036"	"1570.73345"	"1570.73352"	"-0.04"	"-0.00004"	"8/118"	"8"	"118"	"489198.588378906"	"HCD"	"MS2"	"16.06317"	"33.7"	"100.000"	"79.7046"	"27401"	"27401"	"27382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.7"	""	"40.7"	""	"31.4"	""	"55.2"	""	"75.8"	"77.9"	""	"420"	"49"	"33.000"	"26.000"	"0.000270532405855558"	"19"	"0"	"3.873E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.87061"	"1570.73393"	"1570.73352"	"0.27"	"0.00021"	"10/118"	"10"	"118"	"310624.445129395"	"HCD"	"MS2"	"13.75579"	"23.8"	"100.000"	"79.8921"	"27450"	"27450"	"27431"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.4"	""	"20.7"	""	"26.8"	""	"32.5"	"1.2"	"56.9"	"55.2"	""	"421"	"22"	"33.000"	"26.000"	"0.122250909888236"	"14"	"0.0001686"	"0.001741"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.87067"	"1570.73406"	"1570.73352"	"0.34"	"0.00027"	"9/118"	"9"	"118"	"294799.767211914"	"HCD"	"MS2"	"21.73403"	"21.5"	"100.000"	"80.0225"	"27531"	"27531"	"27509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"22.1"	""	"26.0"	""	"35.8"	""	"45.4"	"46.9"	""	"423"	"57"	"33.000"	"26.000"	"4.70230041872772E-05"	"16"	"0"	"7.971E-07"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"785.87073"	"1570.73418"	"1570.73352"	"0.42"	"0.00033"	"16/118"	"16"	"118"	"722425.969604492"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"79.2876"	"27204"	"27204"	"27185"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.8"	""	"33.7"	""	"27.6"	""	"60.6"	""	"67.7"	"86.4"	""	"422"	"46"	"33.000"	"26.000"	"0.000583824687181829"	"21"	"0"	"0.0002832"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"785.87073"	"1570.73418"	"1570.73352"	"0.42"	"0.00033"	"8/118"	"8"	"118"	"729217.210388184"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"79.3935"	"27275"	"27275"	"27260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"31.9"	""	"35.1"	""	"68.3"	""	"88.5"	"92.7"	""	"422"	"45"	"33.000"	"26.000"	"0.000693876941148325"	"21"	"9.9E-05"	"0.0007872"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNGYSDAGDSWR"	"[K].lnGYSDAGDSWR.[S]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.87109"	"1570.73491"	"1570.73352"	"0.89"	"0.00070"	"10/118"	"10"	"118"	"207630.043579102"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"79.1144"	"27161"	"27161"	"27134"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.3"	""	"15.6"	""	"14.2"	""	"21.8"	""	"26.9"	"30.1"	""	"427"	"19"	"33.000"	"26.000"	"0.249113853242516"	"14"	"0.001261"	"0.009565"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDNGGYYISPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"785.90619"	"1570.80510"	"1570.80629"	"-0.76"	"-0.00059"	"14/122"	"14"	"122"	"314493.938049316"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"70.8544"	"23785"	"23785"	"23766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"24.0"	""	"26.9"	""	"38.8"	""	"41.9"	"44.5"	""	"740"	"40"	"35.000"	"28.000"	"0.00338221899343993"	"19"	"0.0001686"	"0.001918"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDNGGYYISPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.8913"	"0.0000"	"1"	"1"	"1"	"785.90704"	"1570.80681"	"1570.80629"	"0.33"	"0.00026"	"15/122"	"15"	"122"	"394418.553833008"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"70.9186"	"23843"	"23843"	"23829"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"44.7"	""	"24.6"	""	"39.4"	"0.6"	"51.5"	"53.6"	""	"742"	"46"	"35.000"	"28.000"	"0.00091490059411394"	"21"	"9.9E-05"	"0.0007973"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDNGGYYISPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"785.90741"	"1570.80754"	"1570.80629"	"0.80"	"0.00063"	"8/122"	"8"	"122"	"357028.545288086"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"70.5415"	"23658"	"23658"	"23638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"35.4"	""	"29.4"	""	"41.7"	"2.3"	"44.8"	"44.2"	""	"745"	"49"	"35.000"	"28.000"	"0.000462515484578173"	"18"	"0"	"0.0002029"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDNGGYYISPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.90814"	"1570.80901"	"1570.80629"	"1.73"	"0.00136"	"10/122"	"10"	"122"	"230488.193847656"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"70.5935"	"23713"	"23713"	"23689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.0"	""	"21.1"	""	"13.9"	""	"27.8"	""	"38.2"	"39.7"	""	"743"	"12"	"35.000"	"28.000"	"2.19765147096189"	"13"	"0.002525"	"0.02434"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVFDTELK"	"[K].mNVFDTELk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"785.92804"	"1570.84880"	"1570.85510"	"-4.01"	"-0.00315"	"7/82"	"7"	"82"	"222938.279418945"	"HCD"	"MS2"	"21.18838"	"19.6"	"100.000"	"89.6928"	"31396"	"31396"	"31378"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"16.3"	""	"21.2"	""	"57.6"	""	"39.1"	"36.1"	""	"865"	"33"	"36.000"	"29.000"	"0.0236584403951643"	"24"	"0.006997"	"0.0883"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNVFDTELK"	"[K].mNVFDTELk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K9(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"785.92969"	"1570.85210"	"1570.85510"	"-1.91"	"-0.00150"	"7/82"	"7"	"82"	"203680.032043457"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"89.6433"	"31416"	"31416"	"31398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"12.6"	""	"20.5"	""	"56.1"	""	"42.2"	"26.4"	""	"844"	"25"	"36.000"	"29.000"	"0.123683694949564"	"18"	"0.009382"	"0.1224"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"785.93512"	"1570.86296"	"1570.86380"	"-0.53"	"-0.00042"	"11/106"	"11"	"106"	"539880.000427246"	"HCD"	"MS2"	"32.26783"	"30.7"	"100.000"	"91.3815"	"32077"	"32077"	"32058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"26.2"	""	"31.8"	""	"90.9"	""	"65.3"	"50.8"	""	"894"	"48"	"36.000"	"29.000"	"0.000787603292745998"	"23"	"0"	"3.212E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"785.93512"	"1570.86296"	"1570.86380"	"-0.53"	"-0.00042"	"16/106"	"16"	"106"	"598028.355529785"	"HCD"	"MS2"	"22.23084"	"32.9"	"100.000"	"91.5585"	"32185"	"32185"	"32169"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.7"	""	"23.3"	""	"35.0"	""	"86.9"	""	"73.2"	"62.3"	""	"894"	"47"	"36.000"	"29.000"	"0.000820932639476711"	"21"	"0"	"0.0001185"	"0.639"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"785.93536"	"1570.86345"	"1570.86380"	"-0.22"	"-0.00018"	"15/106"	"15"	"106"	"349679.164855957"	"HCD"	"MS2"	"18.49146"	"23.1"	"100.000"	"91.7210"	"32215"	"32215"	"32196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"20.1"	""	"22.9"	""	"59.0"	""	"55.0"	"39.9"	""	"894"	"40"	"36.000"	"29.000"	"0.00407668845192092"	"19"	"0.0001686"	"0.001059"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPDDAVETLAR"	"[K].gVVPDDAVETLAR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"P27321"	"Calpastatin OS=Rattus norvegicus OX=10116 GN=Cast PE=1 SV=3"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"785.93604"	"1570.86479"	"1570.86380"	"0.63"	"0.00050"	"8/106"	"8"	"106"	"456439.567443848"	"HCD"	"MS2"	"39.12426"	"26.1"	"100.000"	"91.2653"	"32067"	"32067"	"32046"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"18.7"	""	"27.3"	""	"76.9"	""	"50.0"	"47.7"	""	"896"	"41"	"36.000"	"29.000"	"0.00333639924309883"	"20"	"0"	"0.0003655"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.96283"	"1570.91838"	"1570.92048"	"-1.33"	"-0.00105"	"8/106"	"8"	"106"	"186000.225463867"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"49.9569"	"15337"	"15337"	"15308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"17.8"	""	"15.5"	""	"22.2"	""	"25.5"	"25.9"	""	"737"	"57"	"35.000"	"28.000"	"6.86179109860267E-05"	"16"	"0.0001991"	"0.002134"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.96332"	"1570.91936"	"1570.92048"	"-0.71"	"-0.00056"	"10/106"	"10"	"106"	"525983.954833984"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"50.8312"	"15692"	"15692"	"15670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.6"	""	"48.7"	""	"42.9"	""	"41.6"	""	"61.1"	"70.2"	""	"739"	"67"	"35.000"	"28.000"	"8.06518702425988E-06"	"17"	"0"	"0.0003075"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9863"	"0.0000"	"1"	"1"	"1"	"785.96344"	"1570.91960"	"1570.92048"	"-0.56"	"-0.00044"	"9/106"	"9"	"106"	"3030418.6786499"	"HCD"	"MS2"	"0"	"160.4"	"100.000"	"50.6715"	"15593"	"15593"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.0"	""	"221.9"	""	"210.9"	""	"224.7"	""	"279.8"	"326.1"	""	"733"	"73"	"35.000"	"28.000"	"1.68684034217567E-06"	"18"	"0"	"1.943E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.96350"	"1570.91973"	"1570.92048"	"-0.48"	"-0.00038"	"6/106"	"6"	"106"	"193820.375976563"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"51.3033"	"15848"	"15848"	"15821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.6"	""	"23.0"	""	"26.8"	""	"18.9"	""	"30.5"	"32.9"	""	"733"	"41"	"35.000"	"28.000"	"0.00275469790657672"	"15"	"0.0001991"	"0.003011"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"785.96362"	"1570.91997"	"1570.92048"	"-0.32"	"-0.00025"	"10/106"	"10"	"106"	"3673301.93481445"	"HCD"	"MS2"	"0"	"175.2"	"100.000"	"50.5277"	"15569"	"15569"	"15555"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.4"	""	"230.6"	""	"230.7"	""	"250.4"	""	"309.4"	"352.7"	""	"733"	"72"	"35.000"	"28.000"	"2.37177768671856E-06"	"21"	"0"	"4.292E-07"	"1.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"785.96368"	"1570.92009"	"1570.92048"	"-0.25"	"-0.00019"	"10/106"	"10"	"106"	"1970612.13043213"	"HCD"	"MS2"	"0"	"101.8"	"100.000"	"50.2382"	"15451"	"15451"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.9"	""	"136.2"	""	"139.9"	""	"141.2"	""	"171.2"	"203.5"	""	"733"	"70"	"35.000"	"28.000"	"3.73313743721834E-06"	"20"	"0"	"8.395E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"785.96405"	"1570.92082"	"1570.92048"	"0.22"	"0.00017"	"10/106"	"10"	"106"	"2512016.55249023"	"HCD"	"MS2"	"0"	"125.8"	"100.000"	"50.9797"	"15719"	"15719"	"15701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"194.6"	""	"169.4"	""	"166.7"	""	"176.9"	""	"225.8"	"262.1"	""	"725"	"72"	"35.000"	"28.000"	"2.40606863020692E-06"	"17"	"0"	"2.984E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"524.31189"	"1570.92112"	"1570.92048"	"0.41"	"0.00021"	"11/106"	"11"	"106"	"6961514.88391113"	"HCD"	"MS2"	"49.17118"	"239.0"	"100.000"	"50.2426"	"15453"	"15453"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"299.0"	""	"278.9"	""	"260.7"	""	"361.0"	""	"548.6"	"524.7"	""	"725"	"29"	"35.000"	"28.000"	"0.0414293396361292"	"20"	"9.9E-05"	"0.0004398"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPGQVTEAVK"	"[K].sPPGQVTEAVk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"P07943"	"Aldose reductase OS=Rattus norvegicus OX=10116 GN=Akr1b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9672"	"0.0000"	"1"	"1"	"1"	"785.96423"	"1570.92119"	"1570.92048"	"0.45"	"0.00036"	"8/106"	"8"	"106"	"274237.330627441"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"50.3816"	"15475"	"15475"	"15446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"23.5"	""	"22.3"	""	"26.4"	""	"35.5"	"37.2"	""	"725"	"61"	"35.000"	"28.000"	"2.93297263452163E-05"	"19"	"9.9E-05"	"0.000641"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"786.39685"	"1571.78642"	"1571.79030"	"-2.47"	"-0.00194"	"6/122"	"6"	"122"	"175811.018249512"	"HCD"	"MS2"	"24.43735"	"13.1"	"100.000"	"77.6428"	"26563"	"26563"	"26545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"11.7"	""	"20.1"	""	"20.6"	""	"28.8"	"30.0"	""	"637"	"18"	"35.000"	"28.000"	"0.543387240897494"	"14"	"0.00452"	"0.05273"	"0.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.39752"	"1571.78777"	"1571.79030"	"-1.61"	"-0.00127"	"5/122"	"5"	"122"	"246155.340637207"	"HCD"	"MS2"	"12.15744"	"16.5"	"100.000"	"76.3951"	"26065"	"26065"	"26042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"24.7"	""	"22.6"	""	"30.0"	""	"29.2"	"33.1"	""	"658"	"21"	"35.000"	"28.000"	"0.281316948539061"	"14"	"0.0001991"	"0.003869"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.39850"	"1571.78972"	"1571.79030"	"-0.37"	"-0.00029"	"7/122"	"7"	"122"	"234879.78125"	"HCD"	"MS2"	"9.277421"	"14.5"	"100.000"	"76.3064"	"25998"	"25998"	"25968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"16.0"	""	"19.8"	""	"23.3"	""	"34.0"	"29.7"	""	"667"	"22"	"35.000"	"28.000"	"0.201416867897023"	"14"	"0.0001991"	"0.005014"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.39862"	"1571.78996"	"1571.79030"	"-0.22"	"-0.00017"	"7/122"	"7"	"122"	"339138.465576172"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"76.6179"	"26124"	"26124"	"26104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"28.4"	""	"18.9"	""	"34.0"	""	"49.7"	"45.9"	""	"670"	"40"	"35.000"	"28.000"	"0.0030693386419087"	"15"	"0"	"0.0003619"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDNGGYYISPR"	"[R].sLDnGGYYISPR.[I]"	"N-Term(TMT6plex); N4(Deamidated)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"786.39868"	"1571.79009"	"1571.79030"	"-0.14"	"-0.00011"	"7/122"	"7"	"122"	"310876.606689453"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"76.6830"	"26182"	"26182"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"22.0"	""	"22.3"	""	"32.2"	""	"41.5"	"39.7"	""	"668"	"38"	"35.000"	"28.000"	"0.00547956984248647"	"17"	"0.0001686"	"0.001428"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSLDSIEMAYAR"	"[R].sSLDSIEMAYAR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"Q66HC5"	"Nuclear pore complex protein Nup93 OS=Rattus norvegicus OX=10116 GN=Nup93 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.40088"	"1571.79448"	"1571.79367"	"0.51"	"0.00040"	"5/100"	"5"	"100"	"162222.854797363"	"HCD"	"MS2"	"45.35169"	"11.8"	"100.000"	"94.6272"	"33389"	"33389"	"33367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.1"	""	"11.5"	""	"17.9"	""	"15.3"	""	"23.4"	"24.0"	""	"669"	"13"	"35.000"	"28.000"	"1.78400522540609"	"14"	"0.002373"	"0.02244"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"524.61096"	"1571.81833"	"1571.82016"	"-1.16"	"-0.00061"	"11/96"	"11"	"96"	"1118730.32196045"	"HCD"	"MS2"	"8.075578"	"19.7"	"100.000"	"73.5110"	"24863"	"24863"	"24842"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"25.0"	""	"26.1"	""	"35.8"	""	"38.5"	"36.6"	""	"766"	"39"	"35.000"	"28.000"	"0.00479953070002562"	"18"	"0"	"8.405E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.41315"	"1571.81902"	"1571.82016"	"-0.73"	"-0.00057"	"11/96"	"11"	"96"	"175349.232055664"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"73.4313"	"24860"	"24860"	"24835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.0"	""	"12.5"	""	"19.8"	""	"19.2"	""	"26.4"	"24.1"	""	"783"	"31"	"35.000"	"28.000"	"0.0342556148001541"	"14"	"0"	"0.0002941"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9815"	"0.0000"	"1"	"1"	"1"	"524.61151"	"1571.81998"	"1571.82016"	"-0.12"	"-0.00006"	"8/96"	"8"	"96"	"2885872.65484619"	"HCD"	"MS2"	"24.22481"	"30.4"	"100.000"	"72.9615"	"24668"	"24668"	"24648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"39.4"	""	"45.5"	""	"45.6"	"0.2"	"53.5"	"56.6"	""	"776"	"54"	"35.000"	"28.000"	"0.000150949516257781"	"17"	"0"	"1.652E-06"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"524.61151"	"1571.81998"	"1571.82016"	"-0.12"	"-0.00006"	"8/96"	"8"	"96"	"9280958.75970459"	"HCD"	"MS2"	"3.599479"	"63.4"	"100.000"	"73.1860"	"24731"	"24731"	"24714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.2"	""	"88.7"	""	"99.3"	""	"72.4"	"1.6"	"112.3"	"123.0"	""	"776"	"59"	"35.000"	"28.000"	"4.68631768021431E-05"	"19"	"0"	"1.379E-06"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.41364"	"1571.81999"	"1571.82016"	"-0.11"	"-0.00008"	"11/96"	"11"	"96"	"169729.722412109"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"73.0625"	"24710"	"24710"	"24680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"11.0"	""	"17.5"	""	"13.1"	""	"21.7"	"22.3"	""	"776"	"22"	"35.000"	"28.000"	"0.248217116167267"	"14"	"0.0008247"	"0.00762"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.41370"	"1571.82012"	"1571.82016"	"-0.03"	"-0.00002"	"8/96"	"8"	"96"	"190223.920898438"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"72.9437"	"24632"	"24632"	"24602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"13.1"	""	"16.4"	""	"15.3"	""	"19.3"	"20.6"	""	"772"	"27"	"35.000"	"28.000"	"0.0836733784460403"	"14"	"9.9E-05"	"0.0007334"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.41376"	"1571.82024"	"1571.82016"	"0.05"	"0.00004"	"8/96"	"8"	"96"	"218808.843933105"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"73.2436"	"24754"	"24754"	"24730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"15.2"	""	"21.2"	""	"16.8"	""	"29.5"	"31.1"	""	"772"	"24"	"35.000"	"28.000"	"0.16091158201955"	"14"	"0.0001991"	"0.002925"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9718"	"0.0000"	"1"	"1"	"1"	"524.61169"	"1571.82053"	"1571.82016"	"0.23"	"0.00012"	"9/96"	"9"	"96"	"9708377.80987549"	"HCD"	"MS2"	"3.695894"	"65.1"	"98.537"	"73.2541"	"24788"	"24788"	"24771"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.5"	""	"87.2"	""	"106.8"	""	"67.3"	"1.0"	"128.3"	"120.9"	""	"796"	"71"	"35.000"	"29.000"	"3.27252574678935E-06"	"18"	"0"	"2.467E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"524.61176"	"1571.82071"	"1571.82016"	"0.35"	"0.00018"	"8/96"	"8"	"96"	"2056230.0067749"	"HCD"	"MS2"	"9.709516"	"22.0"	"100.000"	"73.5696"	"24916"	"24916"	"24897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"26.0"	""	"30.3"	""	"30.0"	""	"46.8"	"44.6"	""	"795"	"58"	"35.000"	"29.000"	"5.90659417809085E-05"	"19"	"0"	"1.378E-06"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGMR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"524.61182"	"1571.82090"	"1571.82016"	"0.47"	"0.00024"	"8/96"	"8"	"96"	"4745826.14758301"	"HCD"	"MS2"	"12.06173"	"36.9"	"100.000"	"72.8818"	"24606"	"24606"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.2"	""	"52.5"	""	"56.5"	""	"42.6"	""	"67.4"	"69.4"	""	"795"	"58"	"35.000"	"29.000"	"5.78544984531332E-05"	"18"	"0"	"5.166E-06"	"0.919"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"786.41864"	"1571.83000"	"1571.85905"	"-18.48"	"-0.01452"	"9/124"	"9"	"124"	"996502.667785645"	"HCD"	"MS2"	"48.84928"	"47.7"	"100.000"	"75.0191"	"25505"	"25505"	"25488"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.2"	""	"53.3"	""	"59.6"	""	"79.3"	"2.3"	"92.2"	"98.8"	""	"804"	"25"	"36.000"	"29.000"	"0.1328085554968"	"16"	"0.0001686"	"0.001225"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"0.9077"	"0.0000"	"1"	"1"	"1"	"524.62421"	"1571.85807"	"1571.85905"	"-0.63"	"-0.00033"	"9/124"	"9"	"124"	"2196068.6864624"	"HCD"	"MS2"	"23.74494"	"26.9"	"100.000"	"74.4305"	"25236"	"25236"	"25224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"29.3"	""	"37.1"	""	"50.8"	""	"56.1"	"60.3"	""	"901"	"65"	"36.000"	"29.000"	"1.36048825004111E-05"	"22"	"0"	"7.658E-07"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"786.43274"	"1571.85820"	"1571.85905"	"-0.54"	"-0.00042"	"13/124"	"13"	"124"	"1523526.63140869"	"HCD"	"MS2"	"0"	"66.3"	"100.000"	"74.2691"	"25172"	"25172"	"25158"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.5"	""	"72.3"	""	"77.0"	""	"130.0"	""	"136.5"	"143.9"	""	"883"	"72"	"36.000"	"29.000"	"2.61174461488472E-06"	""	"0"	"3.452E-07"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"524.62433"	"1571.85843"	"1571.85905"	"-0.39"	"-0.00021"	"14/124"	"14"	"124"	"1485542.31152344"	"HCD"	"MS2"	"36.78403"	"24.3"	"100.000"	"74.7231"	"25354"	"25354"	"25336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.7"	""	"23.3"	""	"35.5"	""	"36.4"	""	"50.9"	"55.5"	""	"883"	"47"	"36.000"	"29.000"	"0.00080710624542702"	"19"	"0"	"5.265E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"786.43304"	"1571.85881"	"1571.85905"	"-0.15"	"-0.00012"	"21/124"	"21"	"124"	"4242765.98132324"	"HCD"	"MS2"	"0"	"156.1"	"100.000"	"74.6689"	"25364"	"25364"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"165.8"	""	"171.9"	""	"161.7"	""	"274.1"	"1.7"	"348.7"	"361.3"	""	"879"	"69"	"36.000"	"29.000"	"5.05776770941079E-06"	""	"0"	"1.287E-08"	"1.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.8442"	"0.0000"	"1"	"1"	"1"	"786.43311"	"1571.85893"	"1571.85905"	"-0.07"	"-0.00006"	"13/124"	"13"	"124"	"1312031.746521"	"HCD"	"MS2"	"5.633135"	"52.7"	"100.000"	"74.3874"	"25249"	"25249"	"25233"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.6"	"2.1"	"62.3"	""	"54.8"	""	"96.4"	"0.7"	"114.2"	"110.6"	""	"870"	"77"	"36.000"	"29.000"	"8.19387353928063E-07"	""	"0"	"2.694E-07"	"1.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"0.9077"	"0.0000"	"1"	"1"	"1"	"524.62457"	"1571.85917"	"1571.85905"	"0.07"	"0.00004"	"9/124"	"9"	"124"	"2148303.20349121"	"HCD"	"MS2"	"25.26549"	"26.2"	"100.000"	"74.5765"	"25326"	"25326"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.7"	""	"32.6"	""	"29.2"	""	"48.3"	""	"52.4"	"54.1"	""	"871"	"65"	"36.000"	"29.000"	"1.42229000911052E-05"	"23"	"0"	"7.171E-07"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"786.43341"	"1571.85954"	"1571.85905"	"0.31"	"0.00025"	"10/124"	"10"	"124"	"1063366.42449951"	"HCD"	"MS2"	"36.9565"	"52.8"	"100.000"	"74.8568"	"25408"	"25408"	"25390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"56.0"	""	"66.4"	""	"84.3"	"1.0"	"104.0"	"129.4"	""	"870"	"34"	"36.000"	"29.000"	"0.0180505008545948"	"25"	"9.9E-05"	"0.0005267"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.7973"	"0.0000"	"1"	"1"	"1"	"786.43347"	"1571.85967"	"1571.85905"	"0.39"	"0.00031"	"13/124"	"13"	"124"	"3983437.33410645"	"HCD"	"MS2"	"0"	"139.7"	"100.000"	"74.5548"	"25287"	"25287"	"25275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.0"	"2.5"	"159.4"	""	"155.2"	""	"236.7"	""	"294.3"	"329.9"	""	"870"	"74"	"36.000"	"29.000"	"1.86418606372886E-06"	""	"0"	"9.914E-09"	"1.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVDPGSPASLSGLR"	"[R].sVDPGSPASLSGLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"786.43408"	"1571.86089"	"1571.85905"	"1.17"	"0.00092"	"11/124"	"11"	"124"	"985825.883239746"	"HCD"	"MS2"	"34.18493"	"47.6"	"100.000"	"74.9872"	"25492"	"25492"	"25472"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"54.0"	""	"53.7"	""	"86.8"	"1.0"	"101.5"	"99.8"	""	"846"	"43"	"36.000"	"29.000"	"0.00232455789641775"	"25"	"0"	"0.0003583"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLPNQR"	"[R].aGEMTEVLPNQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"525.27771"	"1573.81858"	"1573.82056"	"-1.26"	"-0.00066"	"10/98"	"10"	"98"	"495283.386169434"	"HCD"	"MS2"	"48.10673"	"21.0"	"100.000"	"63.1411"	"20688"	"20688"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"28.0"	""	"24.1"	""	"31.2"	"0.8"	"42.9"	"43.1"	""	"921"	"17"	"36.000"	"29.000"	"0.982267182503998"	"19"	"0.001217"	"0.009272"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLPNQR"	"[R].aGEMTEVLPNQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.41321"	"1573.81914"	"1573.82056"	"-0.90"	"-0.00071"	"6/98"	"6"	"98"	"180643.470703125"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"62.8985"	"20557"	"20557"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"13.8"	""	"15.4"	""	"20.5"	""	"21.1"	"25.2"	""	"930"	"29"	"36.000"	"29.000"	"0.0576040412736622"	"15"	"0.001488"	"0.01221"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEMTEVLPNQR"	"[R].aGEMTEVLPNQR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"Q99MS0"	"SEC14-like protein 2 OS=Rattus norvegicus OX=10116 GN=Sec14l2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"525.27856"	"1573.82114"	"1573.82056"	"0.37"	"0.00019"	"12/98"	"12"	"98"	"528033.41809082"	"HCD"	"MS2"	"28.35127"	"21.8"	"100.000"	"63.1656"	"20666"	"20666"	"20641"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"29.7"	""	"29.9"	""	"34.4"	""	"43.2"	"39.6"	""	"935"	"18"	"36.000"	"29.000"	"0.729090795071601"	"22"	"9.9E-05"	"0.000736"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSDEAALILHR"	"[K].gYSDEAALILHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8525"	"0.0000"	"1"	"1"	"1"	"525.28894"	"1573.85227"	"1573.85357"	"-0.83"	"-0.00043"	"13/92"	"13"	"92"	"624688.225708008"	"HCD"	"MS2"	"7.775715"	"13.2"	"100.000"	"79.6401"	"27375"	"27375"	"27350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"15.8"	""	"19.5"	""	"27.4"	""	"23.9"	"23.8"	""	"1013"	"61"	"37.000"	"30.000"	"4.21288350063503E-05"	"26"	"0"	"4.188E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSDEAALILHR"	"[K].gYSDEAALILHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"P28494"	"Alpha-mannosidase 2 OS=Rattus norvegicus OX=10116 GN=Man2a1 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"525.28967"	"1573.85447"	"1573.85357"	"0.57"	"0.00030"	"14/92"	"14"	"92"	"635493.999389648"	"HCD"	"MS2"	"24.33052"	"13.5"	"100.000"	"79.5252"	"27301"	"27301"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.6"	""	"16.9"	""	"16.5"	""	"29.0"	""	"31.5"	"24.8"	""	"1038"	"60"	"37.000"	"30.000"	"5.36003169590165E-05"	"25"	"0"	"1.104E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPDADKER"	"[K].aTLPDADkER.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.30176"	"1573.89072"	"1573.89499"	"-2.71"	"-0.00142"	"5/90"	"5"	"90"	"4099379.28851318"	"HCD"	"MS2"	"0"	"181.8"	"100.000"	"39.1616"	"10925"	"10925"	"10903"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"317.4"	""	"175.8"	""	"193.9"	""	"274.5"	""	"382.7"	"382.2"	""	"971"	"19"	"36.000"	"29.000"	"0.553591271860947"	"14"	"0.0009352"	"0.008371"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLPDADKER"	"[K].aTLPDADkER.[L]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.30200"	"1573.89145"	"1573.89499"	"-2.25"	"-0.00118"	"5/90"	"5"	"90"	"4271751.94030762"	"HCD"	"MS2"	"0"	"189.2"	"100.000"	"39.0400"	"10911"	"10911"	"10890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"350.4"	""	"183.2"	""	"192.0"	""	"298.2"	""	"408.4"	"365.3"	""	"990"	"17"	"36.000"	"29.000"	"0.930261824317617"	"14"	"0.001872"	"0.01559"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAGAPSVENVK"	"[K].gSAGAPSVENVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"787.44971"	"1573.89214"	"1573.89499"	"-1.81"	"-0.00143"	"8/106"	"8"	"106"	"219255.721252441"	"HCD"	"MS2"	"100"	"21.2"	"100.000"	"46.3708"	"13882"	"13882"	"13866"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.3"	""	"29.2"	""	"28.1"	""	"27.2"	"0.7"	"39.3"	"38.5"	""	"993"	"30"	"36.000"	"29.000"	"0.0462295060169778"	"17"	"9.9E-05"	"0.0005967"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAGAPSVENVK"	"[K].gSAGAPSVENVk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.45178"	"1573.89629"	"1573.89499"	"0.82"	"0.00065"	"8/106"	"8"	"106"	"262878.951171875"	"HCD"	"MS2"	"100"	"23.2"	"100.000"	"46.6565"	"13961"	"13961"	"13947"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.7"	""	"35.9"	""	"33.2"	""	"39.8"	""	"32.7"	"38.1"	""	"898"	"39"	"36.000"	"29.000"	"0.00519094396744253"	"15"	"0"	"0.0003239"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEAADALLK"	"[K].aVDEAADALLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"787.46271"	"1573.91814"	"1573.92014"	"-1.27"	"-0.00100"	"8/88"	"8"	"88"	"156481.588439941"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"102.3149"	"36527"	"36527"	"36501"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.3"	""	"15.9"	""	"16.9"	""	"15.3"	""	"22.2"	"23.5"	""	"822"	"48"	"36.000"	"29.000"	"0.000657418349760629"	"21"	"9.9E-05"	"0.0005253"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDEAADALLK"	"[K].aVDEAADALLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"Q3KR86"	"MICOS complex subunit Mic60 (Fragment) OS=Rattus norvegicus OX=10116 GN=Immt PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"787.46375"	"1573.92021"	"1573.92014"	"0.04"	"0.00003"	"13/88"	"13"	"88"	"165100.392883301"	"HCD"	"MS2"	"10.75209"	"15.7"	"100.000"	"102.1231"	"36426"	"36426"	"36401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"25.5"	""	"26.6"	""	"22.8"	""	"27.6"	"30.1"	""	"834"	"46"	"36.000"	"29.000"	"0.00097529512852095"	"23"	"9.9E-05"	"0.0006674"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.92084"	"1574.83440"	"1574.83759"	"-2.03"	"-0.00159"	"9/108"	"9"	"108"	"152151.944580078"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"59.3227"	"19106"	"19106"	"19086"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"7.4"	""	"9.2"	""	"12.0"	""	"23.3"	"22.2"	""	"1012"	"17"	"37.000"	"30.000"	"0.935729921202908"	"14"	"0.004275"	"0.05025"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"5"	"787.92120"	"1574.83513"	"1574.83759"	"-1.56"	"-0.00123"	"4/118"	"4"	"118"	"205801.615234375"	"HCD"	"MS2"	"100"	"13.7"	"100.000"	"72.1466"	"24338"	"24338"	"24313"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"16.6"	""	"17.1"	""	"26.4"	"1.2"	"27.6"	"23.3"	""	"1018"	"6"	"37.000"	"30.000"	"11.8227302934577"	"16"	"0.00504"	"0.06412"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"525.61719"	"1574.83701"	"1574.83759"	"-0.37"	"-0.00019"	"11/118"	"11"	"118"	"741400.032409668"	"HCD"	"MS2"	"50.94548"	"22.2"	"100.000"	"72.1686"	"24317"	"24317"	"24288"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"24.3"	""	"31.2"	""	"36.2"	""	"49.0"	"45.6"	""	"1019"	"30"	"37.000"	"30.000"	"0.0488814621757368"	"18"	"0"	"8.397E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"787.92236"	"1574.83745"	"1574.83759"	"-0.09"	"-0.00007"	"7/108"	"7"	"108"	"208868.812133789"	"HCD"	"MS2"	"20.10262"	"14.8"	"100.000"	"59.2144"	"19097"	"19097"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"14.5"	""	"18.6"	""	"29.1"	""	"27.4"	"29.8"	""	"1024"	"6"	"37.000"	"30.000"	"12.6552276224826"	"14"	"0.007259"	"0.09223"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"787.92236"	"1574.83745"	"1574.83759"	"-0.09"	"-0.00007"	"10/118"	"10"	"118"	"973765.723693848"	"HCD"	"MS2"	"10.23119"	"46.2"	"100.000"	"72.3425"	"24387"	"24387"	"24368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.0"	""	"60.6"	""	"51.5"	""	"81.9"	""	"86.7"	"86.1"	""	"1024"	"35"	"37.000"	"30.000"	"0.014937226311686"	"22"	"0"	"9.838E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"787.92242"	"1574.83757"	"1574.83759"	"-0.01"	"-0.00001"	"8/108"	"8"	"108"	"166864.208862305"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"59.4997"	"19212"	"19212"	"19197"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"7.1"	""	"12.0"	""	"17.9"	""	"21.6"	"20.5"	""	"1017"	"27"	"37.000"	"30.000"	"0.111247678577835"	"17"	"0.001951"	"0.01713"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"787.92255"	"1574.83782"	"1574.83759"	"0.15"	"0.00011"	"8/118"	"8"	"118"	"896622.298156738"	"HCD"	"MS2"	"7.858908"	"45.9"	"100.000"	"72.4600"	"24464"	"24464"	"24448"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.5"	""	"56.1"	""	"56.8"	""	"77.9"	""	"86.8"	"90.2"	""	"1021"	"31"	"37.000"	"30.000"	"0.0440550548635039"	"18"	"0.0001686"	"0.001091"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYPLVTPNEER"	"[K].qYPLVTPNEER.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"787.92285"	"1574.83843"	"1574.83759"	"0.53"	"0.00042"	"5/108"	"5"	"108"	"171623.479980469"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"59.6240"	"19229"	"19229"	"19205"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"11.9"	""	"12.9"	""	"20.1"	""	"24.5"	"20.8"	""	"1031"	"29"	"37.000"	"30.000"	"0.0612672898243783"	"22"	"0.002189"	"0.02041"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"525.61774"	"1574.83866"	"1574.83759"	"0.68"	"0.00036"	"12/118"	"12"	"118"	"886716.507507324"	"HCD"	"MS2"	"39.01265"	"26.2"	"100.000"	"72.2974"	"24399"	"24399"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"37.7"	""	"30.5"	""	"41.2"	"0.2"	"53.8"	"51.4"	""	"1051"	"30"	"37.000"	"30.000"	"0.0491555681764539"	"17"	"0"	"0.0001807"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VTSDPQPGFLER"	"[K].vTSDPQPGFLER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"Q5XIP9"	"Transmembrane protein 43 OS=Rattus norvegicus OX=10116 GN=Tmem43 PE=2 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"787.92389"	"1574.84050"	"1574.83759"	"1.85"	"0.00146"	"5/118"	"5"	"118"	"212548.327880859"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"72.0505"	"24269"	"24269"	"24251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.4"	""	"19.7"	""	"15.6"	""	"25.3"	"1.1"	"29.9"	"31.2"	""	"1038"	"19"	"37.000"	"30.000"	"0.685752434142832"	"20"	"0.0007053"	"0.007241"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPLQFHPEGPR"	"[R].aPPLQFHPEGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"525.62537"	"1574.86155"	"1574.86408"	"-1.61"	"-0.00084"	"9/102"	"9"	"102"	"10265292.5963745"	"HCD"	"MS2"	"15.59623"	"104.6"	"100.000"	"57.0660"	"18186"	"18186"	"18170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.3"	""	"132.7"	""	"128.4"	""	"173.3"	"2.3"	"214.5"	"207.9"	""	"1085"	"70"	"37.000"	"30.000"	"5.32598259088342E-06"	"19"	"0"	"3.647E-07"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPLQFHPEGPR"	"[R].aPPLQFHPEGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.62555"	"1574.86209"	"1574.86408"	"-1.26"	"-0.00066"	"9/102"	"9"	"102"	"13529929.7759399"	"HCD"	"MS2"	"4.470253"	"73.7"	"69.021"	"57.0560"	"18217"	"18217"	"18209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.4"	""	"98.9"	""	"97.1"	""	"133.5"	""	"149.2"	"147.0"	""	"1083"	"73"	"37.000"	"30.000"	"2.8946660061346E-06"	"17"	"0"	"1.71E-07"	"1.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPLQFHPEGPR"	"[R].aPPLQFHPEGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"0.9853"	"0.0000"	"1"	"1"	"1"	"525.62567"	"1574.86246"	"1574.86408"	"-1.03"	"-0.00054"	"9/102"	"9"	"102"	"11239153.9675903"	"HCD"	"MS2"	"12.18954"	"109.0"	"100.000"	"56.7921"	"18110"	"18110"	"18101"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.9"	""	"135.1"	""	"150.2"	""	"178.0"	"2.6"	"207.3"	"219.6"	""	"1082"	"68"	"37.000"	"30.000"	"8.87559067300951E-06"	"18"	"0"	"1.16E-07"	"1.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APPLQFHPEGPR"	"[R].aPPLQFHPEGPR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"525.62622"	"1574.86411"	"1574.86408"	"0.02"	"0.00001"	"9/102"	"9"	"102"	"12413429.0808716"	"HCD"	"MS2"	"4.691727"	"93.7"	"99.799"	"57.3486"	"18301"	"18301"	"18284"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.4"	""	"117.6"	""	"121.5"	""	"168.4"	""	"191.0"	"186.2"	""	"1114"	"70"	"37.000"	"30.000"	"5.18627086635581E-06"	"17"	"0"	"2.486E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAESVDNLGK"	"[K].sPAESVDNLGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"787.94220"	"1574.87712"	"1574.87901"	"-1.20"	"-0.00094"	"9/98"	"9"	"98"	"183337.882507324"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"60.0502"	"19402"	"19402"	"19377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"21.3"	"1.7"	"24.7"	""	"27.3"	"1.7"	"29.3"	"35.9"	""	"1059"	"15"	"37.000"	"30.000"	"1.82333288339188"	"13"	"0.007104"	"0.09049"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPAESVDNLGK"	"[K].sPAESVDNLGk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"Q5U312"	"Ankycorbin OS=Rattus norvegicus OX=10116 GN=Rai14 PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"787.94293"	"1574.87859"	"1574.87901"	"-0.27"	"-0.00021"	"7/98"	"7"	"98"	"219384.052612305"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"60.1263"	"19466"	"19466"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.5"	""	"26.8"	""	"21.9"	""	"29.7"	""	"30.3"	"31.3"	""	"1045"	"34"	"37.000"	"30.000"	"0.0213838694708931"	"18"	"0.001316"	"0.0104"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHATTSNTVSK"	"[K].aHATTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"525.63434"	"1574.88846"	"1574.89024"	"-1.13"	"-0.00059"	"14/100"	"14"	"100"	"1111811.9586792"	"HCD"	"MS2"	"7.683137"	"38.4"	"100.000"	"22.0084"	"4070"	"4070"	"4062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"46.7"	""	"36.2"	""	"68.5"	""	"79.0"	"93.9"	""	"1020"	"44"	"37.000"	"30.000"	"0.00226761946409245"	"17"	"0"	"1.585E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHATTSNTVSK"	"[K].aHATTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"525.63458"	"1574.88919"	"1574.89024"	"-0.66"	"-0.00035"	"15/100"	"15"	"100"	"3157333.3605957"	"HCD"	"MS2"	"12.66999"	"102.1"	"100.000"	"21.6404"	"3972"	"3972"	"3958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.2"	""	"107.7"	""	"99.3"	""	"178.4"	""	"210.4"	"249.9"	""	"1037"	"50"	"37.000"	"30.000"	"0.000573784431992419"	"18"	"0"	"5.072E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHATTSNTVSK"	"[K].aHATTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"525.63464"	"1574.88938"	"1574.89024"	"-0.55"	"-0.00029"	"14/100"	"14"	"100"	"1809068.31671143"	"HCD"	"MS2"	"19.91479"	"63.2"	"100.000"	"21.7429"	"3972"	"3972"	"3955"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.1"	"3.1"	"76.2"	""	"61.4"	""	"107.3"	"1.5"	"130.6"	"145.0"	""	"1034"	"46"	"37.000"	"30.000"	"0.00139152349363022"	"18"	"0"	"1.703E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"787.95117"	"1574.89507"	"1574.89510"	"-0.02"	"-0.00002"	"10/116"	"10"	"116"	"246848.012084961"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"92.4621"	"32552"	"32552"	"32529"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.8"	""	"14.5"	""	"17.4"	""	"19.4"	""	"26.9"	"27.3"	""	"964"	"68"	"36.000"	"29.000"	"8.03613156449612E-06"	"25"	"0"	"3.25E-07"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"787.95154"	"1574.89580"	"1574.89510"	"0.44"	"0.00035"	"10/116"	"10"	"116"	"409787.606872559"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"92.4793"	"32523"	"32523"	"32504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"20.8"	""	"24.0"	""	"43.1"	""	"45.7"	"39.2"	""	"997"	"52"	"36.000"	"29.000"	"0.000347268317284218"	"25"	"0"	"1.911E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"787.95154"	"1574.89580"	"1574.89510"	"0.44"	"0.00035"	"10/116"	"10"	"116"	"474209.130126953"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"92.1329"	"32418"	"32418"	"32398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"26.8"	""	"22.1"	""	"39.4"	"1.5"	"41.7"	"43.4"	""	"997"	"62"	"36.000"	"29.000"	"2.80973371429238E-05"	"24"	"0"	"3.207E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAVVVGTITDDVR"	"[K].tAVVVGTITDDVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"P12001"	"60S ribosomal protein L18 OS=Rattus norvegicus OX=10116 GN=Rpl18 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"787.95221"	"1574.89714"	"1574.89510"	"1.30"	"0.00102"	"12/116"	"12"	"116"	"425434.570617676"	"HCD"	"MS2"	"7.582439"	"20.0"	"100.000"	"92.1682"	"32397"	"32397"	"32379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"24.4"	""	"21.0"	""	"35.3"	"0.9"	"40.8"	"42.0"	""	"976"	"65"	"36.000"	"29.000"	"1.69988609737574E-05"	"29"	"0"	"5.521E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNFPADETK"	"[R].vPNFPADETk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"788.44202"	"1575.87676"	"1575.87828"	"-0.97"	"-0.00076"	"7/90"	"7"	"90"	"232735.199584961"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"79.8365"	"27428"	"27428"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.4"	""	"19.1"	""	"26.0"	""	"34.0"	""	"36.1"	"38.5"	""	"1093"	"37"	"37.000"	"30.000"	"0.0103416578758948"	"15"	"0.001049"	"0.008793"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNFPADETK"	"[R].vPNFPADETk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"788.44202"	"1575.87676"	"1575.87828"	"-0.97"	"-0.00076"	"8/90"	"8"	"90"	"276849.900634766"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"80.1747"	"27566"	"27566"	"27540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.3"	""	"25.9"	""	"26.7"	""	"26.5"	""	"40.2"	"37.4"	""	"1093"	"44"	"37.000"	"30.000"	"0.00208732544014085"	"19"	"0.0001991"	"0.005266"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNFPADETK"	"[R].vPNFPADETk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"788.44220"	"1575.87712"	"1575.87828"	"-0.73"	"-0.00058"	"6/90"	"6"	"90"	"181751.440551758"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"80.4669"	"27711"	"27711"	"27684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"15.1"	""	"18.2"	""	"25.1"	""	"33.0"	"29.1"	""	"1093"	"27"	"37.000"	"30.000"	"0.12234611022276"	"16"	"0.004213"	"0.04768"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNFPADETK"	"[R].vPNFPADETk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"2"	"2"	"0.9710"	"0.0000"	"1"	"1"	"1"	"788.44263"	"1575.87798"	"1575.87828"	"-0.19"	"-0.00015"	"9/90"	"9"	"90"	"338745.286865234"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"80.1423"	"27580"	"27580"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"27.9"	""	"28.4"	""	"37.4"	""	"44.3"	"46.9"	""	"1119"	"69"	"37.000"	"30.000"	"7.70548697846162E-06"	"19"	"0"	"0.000255"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"525.96497"	"1575.88034"	"1575.88165"	"-0.83"	"-0.00044"	"9/96"	"9"	"96"	"564643.445678711"	"HCD"	"MS2"	"15.47755"	"20.3"	"100.000"	"87.9177"	"30720"	"30720"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.1"	""	"21.0"	""	"21.8"	""	"34.4"	""	"48.2"	"43.8"	""	"1183"	"35"	"37.000"	"30.000"	"0.0189650830544498"	"22"	"0"	"0.0002741"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"525.96497"	"1575.88034"	"1575.88165"	"-0.83"	"-0.00044"	"9/96"	"9"	"96"	"570687.243713379"	"HCD"	"MS2"	"24.72776"	"19.5"	"100.000"	"87.5582"	"30574"	"30574"	"30554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.9"	""	"25.9"	""	"19.7"	""	"36.4"	""	"43.5"	"36.0"	""	"1183"	"34"	"37.000"	"30.000"	"0.0225400434537417"	"20"	"0"	"0.000123"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"788.44427"	"1575.88127"	"1575.88165"	"-0.24"	"-0.00019"	"6/96"	"6"	"96"	"309061.297424316"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"87.7218"	"30640"	"30640"	"30620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"27.7"	""	"26.9"	""	"46.3"	""	"55.7"	"59.4"	""	"1162"	"32"	"37.000"	"30.000"	"0.0392804208702742"	"20"	"0.0001991"	"0.002318"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"788.44446"	"1575.88164"	"1575.88165"	"-0.01"	"-0.00001"	"14/96"	"14"	"96"	"284167.490539551"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"87.9351"	"30690"	"30690"	"30670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.5"	""	"23.8"	""	"24.7"	""	"41.3"	""	"56.5"	"51.1"	""	"1167"	"47"	"37.000"	"30.000"	"0.00129730132119509"	"24"	"0"	"6.932E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"525.96552"	"1575.88199"	"1575.88165"	"0.22"	"0.00011"	"10/96"	"10"	"96"	"701136.168884277"	"HCD"	"MS2"	"2.735"	"22.8"	"100.000"	"87.9003"	"30676"	"30676"	"30663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.2"	""	"22.4"	""	"30.9"	""	"39.9"	""	"55.0"	"46.4"	""	"1165"	"40"	"37.000"	"30.000"	"0.00553727292304785"	"23"	"0"	"0.0001018"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"525.96552"	"1575.88199"	"1575.88165"	"0.22"	"0.00011"	"10/96"	"10"	"96"	"483866.473876953"	"HCD"	"MS2"	"5.008978"	"15.6"	"100.000"	"87.5914"	"30552"	"30552"	"30533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"21.2"	""	"21.4"	""	"27.3"	"1.1"	"30.3"	"30.3"	""	"1165"	"30"	"37.000"	"30.000"	"0.0644608354166991"	"23"	"0"	"0.0003369"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVPMLTADAK"	"[K].dGVPMLTADAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"Q9JHY1"	"Junctional adhesion molecule A OS=Rattus norvegicus OX=10116 GN=F11r PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"788.44745"	"1575.88762"	"1575.88165"	"3.79"	"0.00299"	"7/96"	"7"	"96"	"161448.913818359"	"HCD"	"MS2"	"35.50789"	"14.4"	"100.000"	"87.4313"	"30523"	"30523"	"30498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"15.8"	""	"18.2"	""	"25.8"	""	"32.3"	"28.5"	""	"1157"	"10"	"37.000"	"30.000"	"5.42379621006622"	"17"	"0.00511"	"0.06523"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFLEIDEHMR"	"[R].tGFLEIDEHMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.27008"	"1576.79569"	"1576.79909"	"-2.16"	"-0.00113"	"11/94"	"11"	"94"	"270235.262634277"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"84.3430"	"29279"	"29279"	"29251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"10.3"	""	"16.7"	""	"15.3"	""	"18.0"	"19.1"	""	"715"	"12"	"35.000"	"28.000"	"2.05719777598033"	"13"	"0.0001991"	"0.005629"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFLEIDEHMR"	"[R].tGFLEIDEHMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"526.27106"	"1576.79862"	"1576.79909"	"-0.30"	"-0.00016"	"12/94"	"12"	"94"	"439568.704833984"	"HCD"	"MS2"	"19.47725"	"10.8"	"100.000"	"83.9352"	"29085"	"29085"	"29061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"18.8"	""	"15.2"	""	"11.5"	""	"19.1"	"20.2"	""	"738"	"32"	"35.000"	"28.000"	"0.0254112697351038"	"21"	"0"	"0.0001743"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFLEIDEHMR"	"[R].tGFLEIDEHMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"3"	"3"	"0.9800"	"0.0000"	"1"	"1"	"1"	"526.27124"	"1576.79917"	"1576.79909"	"0.05"	"0.00002"	"13/94"	"13"	"94"	"542131.976989746"	"HCD"	"MS2"	"13.89309"	"11.7"	"100.000"	"84.0221"	"29149"	"29149"	"29130"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"14.2"	""	"18.9"	""	"17.5"	""	"17.3"	"23.2"	""	"732"	"50"	"35.000"	"28.000"	"0.000402236137232302"	"17"	"0"	"5.018E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGFLEIDEHMR"	"[R].tGFLEIDEHMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"P20650"	"Protein phosphatase 1A OS=Rattus norvegicus OX=10116 GN=Ppm1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.27130"	"1576.79935"	"1576.79909"	"0.16"	"0.00009"	"10/94"	"10"	"94"	"251346.82421875"	"HCD"	"MS2"	"23.07555"	"8.6"	"100.000"	"84.3367"	"29248"	"29248"	"29225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"8.2"	""	"10.0"	""	"14.2"	""	"18.5"	"19.7"	""	"733"	"18"	"35.000"	"28.000"	"0.555998959673847"	"14"	"0.0001991"	"0.003174"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDMEIHAYR"	"[K].lALDmEIHAYR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"526.28278"	"1576.83377"	"1576.83548"	"-1.08"	"-0.00057"	"14/84"	"14"	"84"	"1965833.50006104"	"HCD"	"MS2"	"51.32352"	"46.3"	"100.000"	"75.3131"	"25594"	"25594"	"25569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"50.8"	""	"60.4"	""	"73.9"	""	"96.5"	"102.6"	""	"1014"	"16"	"37.000"	"30.000"	"1.14817466394968"	"18"	"9.9E-05"	"0.000557"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LALDMEIHAYR"	"[K].lALDmEIHAYR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"526.28320"	"1576.83506"	"1576.83548"	"-0.27"	"-0.00014"	"10/84"	"10"	"84"	"3854186.23535156"	"HCD"	"MS2"	"48.88498"	"74.5"	"100.000"	"75.3164"	"25626"	"25626"	"25607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"83.6"	""	"91.8"	""	"146.0"	""	"125.0"	"162.0"	""	"1012"	"30"	"37.000"	"30.000"	"0.0470056991710648"	"21"	"9.9E-05"	"0.000455"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLAPEYEAAATR"	"[K].rLAPEYEAAATR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.29175"	"1576.86069"	"1576.86447"	"-2.40"	"-0.00126"	"11/122"	"11"	"122"	"3806215.65875244"	"HCD"	"MS2"	"31.7403"	"130.4"	"100.000"	"37.9418"	"10462"	"10462"	"10439"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.9"	""	"146.1"	""	"146.2"	""	"209.4"	""	"280.7"	"296.4"	""	"1107"	"55"	"37.000"	"30.000"	"0.000182859540963877"	"16"	"0"	"3.715E-07"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.2414"	"0.0000"	"1"	"1"	"1"	"788.93555"	"1576.86382"	"1576.86567"	"-1.17"	"-0.00092"	"11/86"	"11"	"86"	"291143.539794922"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"66.9532"	"22234"	"22234"	"22203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.1"	""	"21.2"	""	"24.3"	""	"53.9"	""	"39.9"	"38.6"	""	"1186"	"29"	"37.000"	"30.000"	"0.0760422035515021"	""	"0.000264"	"0.006083"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.3913"	"0.0000"	"1"	"1"	"1"	"788.93573"	"1576.86418"	"1576.86567"	"-0.94"	"-0.00074"	"8/86"	"8"	"86"	"405927.003417969"	"HCD"	"MS2"	"0"	"27.9"	"100.000"	"67.2711"	"22362"	"22362"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"27.3"	""	"34.0"	""	"71.1"	""	"56.2"	"44.7"	""	"1189"	"23"	"37.000"	"30.000"	"0.295904697019977"	"28"	"0.0005161"	"0.007016"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"788.93610"	"1576.86492"	"1576.86567"	"-0.48"	"-0.00038"	"6/86"	"6"	"86"	"296896.124511719"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"67.5889"	"22491"	"22491"	"22470"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"19.2"	""	"29.8"	""	"50.9"	""	"50.1"	"36.2"	""	"1164"	"26"	"37.000"	"30.000"	"0.163652628329218"	""	"0.0001991"	"0.004363"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAMPGEDLK"	"[K].eLAmPGEDLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"P85834"	"Elongation factor Tu, mitochondrial OS=Rattus norvegicus OX=10116 GN=Tufm PE=1 SV=1"	"0"	"2"	"2"	"0.3871"	"0.0000"	"1"	"1"	"1"	"788.93652"	"1576.86577"	"1576.86567"	"0.07"	"0.00005"	"11/86"	"11"	"86"	"261945.796142578"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"67.5855"	"22458"	"22458"	"22441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"18.3"	""	"26.2"	""	"54.1"	""	"45.4"	"36.5"	""	"1166"	"31"	"37.000"	"30.000"	"0.0455689010074996"	""	"0.0001991"	"0.004882"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEHLSGDGK"	"[K].yLEHLSGDGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"526.29523"	"1576.87113"	"1576.87353"	"-1.52"	"-0.00080"	"10/82"	"10"	"82"	"2105963.12670898"	"HCD"	"MS2"	"17.70748"	"78.3"	"100.000"	"52.7954"	"16488"	"16488"	"16466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.6"	""	"85.3"	""	"101.8"	""	"110.9"	""	"156.5"	"150.5"	""	"1146"	"31"	"37.000"	"30.000"	"0.04530588538439"	"15"	"0.0001686"	"0.001813"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLEHLSGDGK"	"[K].yLEHLSGDGk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"526.29565"	"1576.87241"	"1576.87353"	"-0.71"	"-0.00037"	"11/82"	"11"	"82"	"1659734.50646973"	"HCD"	"MS2"	"15.99296"	"66.3"	"100.000"	"53.1749"	"16609"	"16609"	"16586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.7"	""	"81.5"	""	"81.6"	""	"94.7"	""	"128.8"	"126.0"	""	"1143"	"37"	"37.000"	"30.000"	"0.0117223918519881"	"16"	"9.9E-05"	"0.000425"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEELAQTWK"	"[R].nEELAQTWk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"Q9ES54"	"Nuclear protein localization protein 4 homolog OS=Rattus norvegicus OX=10116 GN=Nploc4 PE=1 SV=3"	"0"	"2"	"2"	"0.2105"	"0.0000"	"1"	"1"	"1"	"788.94061"	"1576.87395"	"1576.87353"	"0.27"	"0.00021"	"8/90"	"8"	"90"	"148215.717712402"	"HCD"	"MS2"	"27.51788"	"14.4"	"100.000"	"73.8876"	"25046"	"25046"	"25021"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"14.5"	""	"19.5"	""	"20.3"	""	"32.9"	"33.2"	""	"1129"	"19"	"37.000"	"30.000"	"0.69129584448512"	"29"	"0.001488"	"0.01275"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"788.94202"	"1576.87676"	"1576.87690"	"-0.09"	"-0.00007"	"7/80"	"7"	"80"	"235116.995788574"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"88.5304"	"30968"	"30968"	"30949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.5"	""	"28.5"	""	"29.1"	""	"25.5"	""	"48.7"	"61.5"	""	"1136"	"38"	"37.000"	"30.000"	"0.00955758866688025"	"23"	"9.9E-05"	"0.0004089"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"526.29724"	"1576.87717"	"1576.87690"	"0.17"	"0.00009"	"7/80"	"7"	"80"	"198094.61517334"	"HCD"	"MS2"	"22.44129"	"9.3"	"100.000"	"88.6595"	"31021"	"31021"	"30991"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"12.5"	""	"12.5"	""	"15.6"	""	"19.2"	"20.4"	""	"1117"	"14"	"37.000"	"30.000"	"2.44356095730884"	"22"	"0.003001"	"0.03218"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"788.94232"	"1576.87737"	"1576.87690"	"0.30"	"0.00023"	"16/80"	"16"	"80"	"450691.045043945"	"HCD"	"MS2"	"3.513779"	"46.4"	"100.000"	"88.3775"	"30867"	"30867"	"30855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.3"	""	"64.0"	""	"45.0"	""	"44.8"	"0.5"	"115.4"	"122.0"	""	"1120"	"54"	"37.000"	"30.000"	"0.000246143304645182"	"24"	"0"	"3.242E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.6562"	"0.0000"	"1"	"1"	"1"	"788.94244"	"1576.87761"	"1576.87690"	"0.45"	"0.00036"	"11/80"	"11"	"80"	"165863.980163574"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"88.6771"	"30988"	"30988"	"30966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.1"	""	"23.9"	""	"18.1"	""	"18.4"	""	"37.3"	"40.7"	""	"1120"	"32"	"37.000"	"30.000"	"0.0335110493233779"	"26"	"9.9E-05"	"0.0009523"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"526.29755"	"1576.87809"	"1576.87690"	"0.75"	"0.00040"	"9/80"	"9"	"80"	"779908.915466309"	"HCD"	"MS2"	"12.14832"	"30.2"	"100.000"	"88.3845"	"30870"	"30870"	"30855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.4"	""	"33.3"	""	"44.9"	""	"34.3"	"1.3"	"69.3"	"68.5"	""	"1120"	"30"	"37.000"	"30.000"	"0.0528674090720117"	"23"	"0.0001686"	"0.001783"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"788.94312"	"1576.87895"	"1576.87690"	"1.30"	"0.00103"	"16/80"	"16"	"80"	"383717.656555176"	"HCD"	"MS2"	"0"	"37.5"	"100.000"	"88.2057"	"30837"	"30837"	"30815"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.4"	""	"46.4"	""	"43.2"	""	"40.5"	"0.1"	"85.7"	"95.9"	""	"1123"	"51"	"37.000"	"30.000"	"0.000401189687091401"	"28"	"0"	"2.16E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQDEIQNMK"	"[R].lQDEIQNMk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"526.29834"	"1576.88047"	"1576.87690"	"2.26"	"0.00119"	"9/80"	"9"	"80"	"725755.870788574"	"HCD"	"MS2"	"18.15951"	"27.1"	"100.000"	"88.2472"	"30854"	"30854"	"30831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"35.5"	""	"38.6"	""	"32.0"	""	"58.6"	"63.6"	""	"1126"	"31"	"37.000"	"30.000"	"0.0433020437881361"	"20"	"9.9E-05"	"0.000952"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLNGESGQAK"	"[K].tLLnGESGQAk.[R]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"788.95068"	"1576.89409"	"1576.89466"	"-0.36"	"-0.00028"	"7/106"	"7"	"106"	"197183.379333496"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"57.9254"	"18572"	"18572"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"24.6"	""	"20.7"	""	"31.3"	"0.4"	"35.1"	"40.3"	""	"1030"	"12"	"37.000"	"30.000"	"2.97034728647009"	"15"	"0.00212"	"0.01893"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLNGESGQAK"	"[K].tLLnGESGQAk.[R]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"1"	"1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"O54735"	"cGMP-specific 3',5'-cyclic phosphodiesterase OS=Rattus norvegicus OX=10116 GN=Pde5a PE=2 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"788.95093"	"1576.89458"	"1576.89466"	"-0.05"	"-0.00004"	"10/106"	"10"	"106"	"160746.24395752"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"58.3927"	"18727"	"18727"	"18702"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.6"	""	"20.0"	""	"24.3"	""	"21.5"	""	"27.3"	"26.5"	""	"1082"	"20"	"37.000"	"30.000"	"0.575701372859354"	"16"	"0.0001991"	"0.003076"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVEGIQASVK"	"[K].sTVEGIQASVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"526.31439"	"1576.92862"	"1576.93104"	"-1.53"	"-0.00081"	"11/104"	"11"	"104"	"1580541.79986572"	"HCD"	"MS2"	"0"	"49.1"	"100.000"	"63.7304"	"20928"	"20928"	"20905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"59.3"	""	"52.0"	""	"94.0"	""	"102.8"	"98.8"	""	"760"	"35"	"35.000"	"28.000"	"0.0130852973690069"	"24"	"0"	"3.564E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAVTSVNLTK"	"[K].eGAVTSVNLTk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"788.96808"	"1576.92888"	"1576.93104"	"-1.37"	"-0.00108"	"11/104"	"11"	"104"	"163234.733032227"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"69.1750"	"23103"	"23103"	"23076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"18.8"	""	"19.8"	""	"20.5"	""	"23.3"	"24.2"	""	"760"	"41"	"35.000"	"28.000"	"0.00301150505582579"	"19"	"0"	"0.0002846"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVEGIQASVK"	"[K].sTVEGIQASVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"526.31464"	"1576.92936"	"1576.93104"	"-1.07"	"-0.00056"	"11/104"	"11"	"104"	"1384628.51776123"	"HCD"	"MS2"	"0"	"42.2"	"100.000"	"63.7708"	"20912"	"20912"	"20894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.9"	""	"47.8"	""	"45.4"	""	"70.3"	"0.9"	"86.6"	"100.5"	""	"783"	"32"	"35.000"	"28.000"	"0.0240287825022017"	"18"	"0"	"6.637E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAVTSVNLTK"	"[K].eGAVTSVNLTk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"526.31476"	"1576.92972"	"1576.93104"	"-0.84"	"-0.00044"	"11/104"	"11"	"104"	"380484.735778809"	"HCD"	"MS2"	"35.34644"	"18.4"	"100.000"	"69.3860"	"23223"	"23223"	"23196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"23.1"	""	"27.5"	""	"31.3"	""	"38.0"	"35.5"	""	"785"	"30"	"35.000"	"28.000"	"0.0418638977582877"	"17"	"9.9E-05"	"0.0009629"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVEGIQASVK"	"[K].sTVEGIQASVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"788.96863"	"1576.92998"	"1576.93104"	"-0.67"	"-0.00053"	"17/104"	"17"	"104"	"1082300.90435791"	"HCD"	"MS2"	"0"	"86.4"	"100.000"	"63.4844"	"20827"	"20827"	"20814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.5"	""	"86.4"	""	"94.4"	""	"165.0"	"0.8"	"174.9"	"201.5"	""	"785"	"64"	"35.000"	"28.000"	"1.51300255383816E-05"	""	"0"	"1.08E-07"	"1.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVEGIQASVK"	"[K].sTVEGIQASVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"788.96863"	"1576.92998"	"1576.93104"	"-0.67"	"-0.00053"	"10/104"	"10"	"104"	"1091621.98651123"	"HCD"	"MS2"	"0"	"85.7"	"100.000"	"63.5090"	"20806"	"20806"	"20789"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.4"	""	"91.9"	""	"96.1"	""	"162.4"	"2.3"	"177.2"	"183.9"	""	"785"	"63"	"35.000"	"28.000"	"1.93570718052312E-05"	""	"0"	"1.526E-07"	"1.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGAVTSVNLTK"	"[K].eGAVTSVNLTk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"788.96869"	"1576.93010"	"1576.93104"	"-0.60"	"-0.00047"	"11/104"	"11"	"104"	"165419.098022461"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"69.3538"	"23210"	"23210"	"23183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"19.6"	""	"22.9"	""	"19.2"	""	"27.4"	"23.8"	""	"789"	"42"	"35.000"	"28.000"	"0.00237709756706334"	"20"	"0.0001991"	"0.005112"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVEGIQASVK"	"[K].sTVEGIQASVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7632"	"0.0000"	"1"	"1"	"1"	"526.31512"	"1576.93082"	"1576.93104"	"-0.14"	"-0.00007"	"12/104"	"12"	"104"	"4233603.83978271"	"HCD"	"MS2"	"10.73106"	"96.9"	"100.000"	"63.4246"	"20803"	"20803"	"20782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.2"	""	"102.8"	""	"114.9"	""	"187.4"	"1.9"	"207.8"	"202.3"	""	"783"	"38"	"35.000"	"28.000"	"0.00561994113157956"	"24"	"0"	"2.093E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STVEGIQASVK"	"[K].sTVEGIQASVk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"526.31512"	"1576.93082"	"1576.93104"	"-0.14"	"-0.00007"	"12/104"	"12"	"104"	"4606245.02722168"	"HCD"	"MS2"	"9.507872"	"108.6"	"100.000"	"63.4490"	"20781"	"20781"	"20763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.6"	""	"117.9"	""	"130.8"	""	"194.2"	"0.4"	"215.6"	"240.3"	""	"783"	"41"	"35.000"	"28.000"	"0.00324139357093379"	"26"	"0"	"6.553E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.40833"	"1577.80937"	"1577.81210"	"-1.73"	"-0.00136"	"5/104"	"5"	"104"	"130712.730407715"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"81.4748"	"28093"	"28093"	"28065"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"14.2"	""	"14.8"	""	"16.4"	""	"15.8"	"23.7"	""	"940"	"22"	"36.000"	"29.000"	"0.300675372676844"	"14"	"0.003818"	"0.04167"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.40918"	"1577.81108"	"1577.81210"	"-0.65"	"-0.00051"	"6/104"	"6"	"104"	"162778.974731445"	"HCD"	"MS2"	"33.31139"	"13.8"	"100.000"	"82.0954"	"28344"	"28344"	"28327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"15.9"	""	"24.9"	""	"18.5"	""	"24.9"	"26.6"	""	"955"	"24"	"36.000"	"29.000"	"0.194524082651464"	"14"	"0.004213"	"0.04765"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.40948"	"1577.81169"	"1577.81210"	"-0.26"	"-0.00020"	"7/104"	"7"	"104"	"461407.686462402"	"HCD"	"MS2"	"11.03036"	"24.4"	"100.000"	"81.7862"	"28218"	"28218"	"28199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"30.7"	""	"37.2"	""	"33.4"	""	"38.4"	"44.4"	""	"948"	"51"	"36.000"	"29.000"	"0.000408111038535501"	"16"	"0.0001991"	"0.004112"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.40979"	"1577.81230"	"1577.81210"	"0.13"	"0.00010"	"6/104"	"6"	"104"	"412631.430541992"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"81.8669"	"28279"	"28279"	"28259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"34.4"	""	"35.4"	""	"25.1"	""	"29.7"	"41.1"	""	"949"	"37"	"36.000"	"29.000"	"0.00899986959614689"	"15"	"0.0001686"	"0.001907"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.41022"	"1577.81316"	"1577.81210"	"0.67"	"0.00053"	"6/104"	"6"	"104"	"166544.406311035"	"HCD"	"MS2"	"39.47678"	"13.8"	"100.000"	"82.1781"	"28406"	"28406"	"28382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"18.7"	""	"23.0"	""	"16.7"	""	"23.2"	"29.0"	""	"956"	"26"	"36.000"	"29.000"	"0.133483595611145"	"14"	"0.006305"	"0.07813"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].ASDSSINWNNLk.[G]"	"K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.41064"	"1577.81401"	"1577.81210"	"1.21"	"0.00096"	"6/104"	"6"	"104"	"176166.512573242"	"HCD"	"MS2"	"24.23691"	"13.2"	"100.000"	"81.5506"	"28151"	"28151"	"28125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.5"	""	"18.7"	""	"20.0"	""	"19.0"	""	"24.0"	"20.1"	""	"971"	"33"	"36.000"	"29.000"	"0.0239987838532108"	"15"	"0.001718"	"0.01503"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFSQGPINSANR"	"[R].aSFSQGPINSANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.41388"	"1577.82048"	"1577.82333"	"-1.81"	"-0.00143"	"15/128"	"15"	"128"	"308953.337402344"	"HCD"	"MS2"	"34.00823"	"18.8"	"100.000"	"45.4892"	"13526"	"13526"	"13496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.0"	""	"20.0"	""	"24.5"	""	"35.5"	""	"26.5"	"30.9"	""	"979"	"24"	"36.000"	"29.000"	"0.185247645219017"	"14"	"9.9E-05"	"0.0006032"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFSQGPINSANR"	"[R].aSFSQGPINSANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"789.41443"	"1577.82158"	"1577.82333"	"-1.11"	"-0.00088"	"14/128"	"14"	"128"	"272022.39239502"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"45.8320"	"13666"	"13666"	"13637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"20.2"	""	"29.5"	""	"23.6"	""	"28.1"	"36.3"	""	"973"	"45"	"36.000"	"29.000"	"0.00155268316650652"	"21"	"0"	"1.35E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFSQGPINSANR"	"[R].aSFSQGPINSANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"789.41504"	"1577.82280"	"1577.82333"	"-0.34"	"-0.00027"	"17/128"	"17"	"128"	"368456.693725586"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"46.0887"	"13736"	"13736"	"13713"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.8"	""	"24.8"	""	"34.0"	""	"25.8"	""	"37.5"	"35.7"	""	"996"	"66"	"36.000"	"29.000"	"1.2168284152416E-05"	"20"	"0"	"1.287E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASFSQGPINSANR"	"[R].aSFSQGPINSANR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"P70470"	"Acyl-protein thioesterase 1 OS=Rattus norvegicus OX=10116 GN=Lypla1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"789.41656"	"1577.82585"	"1577.82333"	"1.60"	"0.00126"	"5/128"	"5"	"128"	"244179.222839355"	"HCD"	"MS2"	"45.98926"	"15.9"	"100.000"	"45.7620"	"13603"	"13603"	"13573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.8"	""	"18.7"	""	"25.5"	""	"26.9"	""	"20.9"	"25.7"	""	"994"	"21"	"36.000"	"29.000"	"0.384907513507852"	"14"	"0"	"0.0003365"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSLPESSPSK"	"[R].tSSLPESSPSk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LR10"	"LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"F1LR10"	"LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"789.44312"	"1577.87895"	"1577.87867"	"0.18"	"0.00014"	"5/98"	"5"	"98"	"155355.595153809"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"43.4079"	"12679"	"12679"	"12651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"14.2"	""	"19.3"	""	"21.2"	""	"26.3"	"34.7"	""	"1044"	"18"	"37.000"	"30.000"	"0.770318810370017"	"20"	"0.006777"	"0.08402"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSSLPESSPSK"	"[R].tSSLPESSPSk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"F1LR10"	"LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"F1LR10"	"LIM domain and actin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Lima1 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"789.44336"	"1577.87944"	"1577.87867"	"0.49"	"0.00038"	"9/98"	"9"	"98"	"170370.892456055"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"43.6583"	"12747"	"12747"	"12716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"16.9"	""	"17.7"	""	"19.9"	""	"25.5"	"31.9"	""	"1046"	"23"	"37.000"	"30.000"	"0.284774887436586"	"22"	"0.000264"	"0.006133"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.64276"	"1577.91373"	"1577.91506"	"-0.84"	"-0.00044"	"12/98"	"12"	"98"	"407535.929016113"	"HCD"	"MS2"	"75.13134"	"14.1"	"100.000"	"85.9486"	"29898"	"29898"	"29870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"13.9"	""	"13.6"	""	"19.8"	""	"39.8"	"34.1"	""	"917"	"21"	"36.000"	"29.000"	"0.374403017267915"	"14"	"0"	"0.0002744"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"526.64276"	"1577.91373"	"1577.91506"	"-0.84"	"-0.00044"	"11/98"	"11"	"98"	"762971.059570313"	"HCD"	"MS2"	"8.712252"	"21.3"	"100.000"	"86.0243"	"29958"	"29958"	"29935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"17.5"	""	"16.0"	""	"38.6"	""	"54.9"	"62.0"	""	"917"	"36"	"36.000"	"29.000"	"0.0115968313137056"	"26"	"0"	"0.0001337"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"789.46063"	"1577.91399"	"1577.91506"	"-0.68"	"-0.00054"	"13/98"	"13"	"98"	"214285.33190918"	"HCD"	"MS2"	"36.72773"	"17.7"	"100.000"	"85.9965"	"29947"	"29947"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.1"	""	"21.7"	""	"14.9"	""	"31.6"	""	"39.2"	"47.3"	""	"916"	"50"	"36.000"	"29.000"	"0.000504505003769968"	"22"	"0"	"7.605E-06"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"526.64294"	"1577.91428"	"1577.91506"	"-0.49"	"-0.00026"	"12/98"	"12"	"98"	"1128634.63916016"	"HCD"	"MS2"	"4.545131"	"31.5"	"100.000"	"86.2231"	"30006"	"30006"	"29994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.1"	""	"24.4"	""	"19.5"	""	"58.1"	"1.8"	"78.9"	"92.2"	""	"917"	"32"	"36.000"	"29.000"	"0.0273740678898689"	"21"	"0"	"0.0001369"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.6410"	"0.0000"	"1"	"1"	"1"	"526.64307"	"1577.91465"	"1577.91506"	"-0.26"	"-0.00014"	"11/98"	"11"	"98"	"822242.634277344"	"HCD"	"MS2"	"3.818828"	"24.5"	"100.000"	"86.3192"	"30077"	"30077"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"17.3"	""	"15.5"	""	"46.0"	"0.4"	"63.2"	"73.4"	""	"917"	"39"	"36.000"	"29.000"	"0.00612829044336544"	"29"	"0"	"2.184E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"789.46130"	"1577.91533"	"1577.91506"	"0.17"	"0.00014"	"18/98"	"18"	"98"	"272939.410766602"	"HCD"	"MS2"	"6.455619"	"21.4"	"100.000"	"86.3244"	"30047"	"30047"	"30032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"13.8"	""	"11.3"	""	"40.5"	"0.3"	"56.2"	"66.3"	""	"949"	"60"	"36.000"	"29.000"	"4.87793733461011E-05"	"24"	"0"	"6.491E-07"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAALSTALSEK"	"[K].eAALSTALSEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"789.46143"	"1577.91557"	"1577.91506"	"0.33"	"0.00026"	"9/98"	"9"	"98"	"268896.350402832"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"86.3238"	"30079"	"30079"	"30058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"18.0"	""	"13.2"	""	"44.3"	"1.2"	"58.7"	"69.1"	""	"945"	"66"	"36.000"	"29.000"	"1.15984996266118E-05"	"27"	"0"	"1.478E-06"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPEDGLSEDK"	"[K].mPEDGLSEDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"Q62736"	"Non-muscle caldesmon OS=Rattus norvegicus OX=10116 GN=Cald1 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"789.90649"	"1578.80571"	"1578.80854"	"-1.79"	"-0.00142"	"5/84"	"5"	"84"	"149688.159484863"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"64.3895"	"21161"	"21161"	"21139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"5.2"	""	"13.0"	""	"23.1"	""	"42.4"	"39.4"	""	"930"	"25"	"36.000"	"29.000"	"0.15575892920839"	"22"	"0.00714"	"0.09166"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEQYYAMK"	"[K].aTEQYYAmk.[I]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"789.91498"	"1578.82268"	"1578.82380"	"-0.71"	"-0.00056"	"11/76"	"11"	"76"	"212902.737182617"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"46.5060"	"13936"	"13936"	"13914"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"20.3"	""	"26.6"	""	"38.7"	""	"34.3"	"32.4"	""	"1017"	"30"	"37.000"	"30.000"	"0.0486733185253428"	"20"	"0.0007633"	"0.007455"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESMLQQADK"	"[R].aESMLQQADk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"526.95618"	"1578.85398"	"1578.85616"	"-1.38"	"-0.00073"	"8/94"	"8"	"94"	"1590499.88342285"	"HCD"	"MS2"	"43.52986"	"50.0"	"100.000"	"63.2648"	"20706"	"20706"	"20684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.0"	""	"52.4"	""	"56.2"	""	"92.2"	"0.3"	"108.5"	"95.2"	""	"1098"	"24"	"37.000"	"30.000"	"0.234732024497221"	"19"	"0.0001991"	"0.003554"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESMLQQADK"	"[R].aESMLQQADk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"526.95648"	"1578.85489"	"1578.85616"	"-0.80"	"-0.00042"	"10/94"	"10"	"94"	"2089031.76202393"	"HCD"	"MS2"	"33.94276"	"59.8"	"100.000"	"63.2818"	"20745"	"20745"	"20718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.0"	""	"70.2"	""	"70.3"	""	"101.9"	""	"120.4"	"124.8"	""	"1106"	"25"	"37.000"	"30.000"	"0.180187695654111"	"24"	"0.0001991"	"0.002942"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESMLQQADK"	"[R].aESMLQQADk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7705"	"0.0000"	"1"	"1"	"1"	"789.93140"	"1578.85552"	"1578.85616"	"-0.41"	"-0.00032"	"9/94"	"9"	"94"	"1153751.16021729"	"HCD"	"MS2"	"9.640769"	"105.0"	"100.000"	"63.3834"	"20786"	"20786"	"20766"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.1"	""	"104.2"	""	"117.2"	""	"179.4"	""	"222.6"	"225.4"	""	"1089"	"61"	"37.000"	"30.000"	"4.2072457858461E-05"	"30"	"0"	"1.72E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AESMLQQADK"	"[R].aESMLQQADk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"789.93188"	"1578.85649"	"1578.85616"	"0.21"	"0.00016"	"9/94"	"9"	"94"	"1265147.56915283"	"HCD"	"MS2"	"12.81045"	"104.5"	"100.000"	"63.4168"	"20768"	"20768"	"20747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.3"	""	"104.8"	""	"123.0"	""	"201.7"	""	"211.2"	"222.7"	""	"1081"	"61"	"37.000"	"30.000"	"4.20528755837014E-05"	"23"	"0"	"3.758E-06"	"0.947"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDESIRPFK"	"[K].eDESIRPFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"526.96747"	"1578.88785"	"1578.88918"	"-0.84"	"-0.00044"	"6/76"	"6"	"76"	"2439204.39379883"	"HCD"	"MS2"	"20.18854"	"113.7"	"100.000"	"53.4351"	"16749"	"16749"	"16728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"164.7"	""	"128.7"	""	"145.2"	""	"172.4"	""	"243.0"	"233.5"	""	"1039"	"4"	"37.000"	"30.000"	"19.7054134693828"	"14"	"0.00212"	"0.01915"	"0.183"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDESIRPFK"	"[K].eDESIRPFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.96759"	"1578.88822"	"1578.88918"	"-0.61"	"-0.00032"	"7/76"	"7"	"76"	"2790650.67797852"	"HCD"	"MS2"	"8.524297"	"138.9"	"100.000"	"53.4422"	"16718"	"16718"	"16698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"208.3"	""	"174.2"	""	"170.4"	""	"224.1"	""	"288.9"	"253.9"	""	"1039"	"10"	"37.000"	"30.000"	"5.72249671306766"	"13"	"0.0005161"	"0.00675"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDESIRPFK"	"[K].eDESIRPFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"526.96759"	"1578.88822"	"1578.88918"	"-0.61"	"-0.00032"	"7/76"	"7"	"76"	"2587525.92498779"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"53.1107"	"16617"	"16617"	"16593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.2"	""	"156.6"	""	"142.9"	""	"196.3"	""	"255.6"	"208.1"	""	"1039"	"4"	"37.000"	"30.000"	"21.3101031501543"	"15"	"0.006267"	"0.07766"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDESIRPFK"	"[K].eDESIRPFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.96802"	"1578.88950"	"1578.88918"	"0.20"	"0.00011"	"10/76"	"10"	"76"	"2587465.41668701"	"HCD"	"MS2"	"11.80426"	"127.0"	"100.000"	"53.7549"	"16846"	"16846"	"16825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"183.1"	"2.4"	"153.4"	""	"159.6"	""	"191.9"	""	"269.1"	"248.1"	""	"1023"	"3"	"37.000"	"30.000"	"24.5949326732036"	"13"	"0.001103"	"0.009187"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDPEGMGIIPR"	"[K].lHDPEGmGIIPR.[I]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"527.28613"	"1579.84385"	"1579.84638"	"-1.60"	"-0.00084"	"9/92"	"9"	"92"	"731556.190551758"	"HCD"	"MS2"	"12.34512"	"21.4"	"100.000"	"54.5900"	"17187"	"17187"	"17157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.4"	""	"24.8"	""	"29.1"	""	"43.4"	""	"41.0"	"38.5"	""	"1147"	"34"	"37.000"	"30.000"	"0.0229897062559258"	"17"	"9.9E-05"	"0.0006317"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LHDPEGMGIIPR"	"[K].lHDPEGmGIIPR.[I]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"527.28625"	"1579.84421"	"1579.84638"	"-1.37"	"-0.00072"	"9/92"	"9"	"92"	"1258680.96264648"	"HCD"	"MS2"	"6.275146"	"34.1"	"100.000"	"54.2703"	"17090"	"17090"	"17063"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.0"	""	"40.8"	""	"42.2"	""	"70.1"	"0.5"	"68.7"	"67.4"	""	"1143"	"47"	"37.000"	"30.000"	"0.00111947973090867"	"24"	"0"	"3.507E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFNANLEGDK"	"[K].nFNANLEGDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"1"	"790.42792"	"1579.84856"	"1579.84804"	"0.33"	"0.00026"	"8/94"	"8"	"94"	"169080.601013184"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"65.4955"	"21612"	"21612"	"21583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"26.8"	""	"20.1"	""	"28.0"	""	"37.0"	"37.9"	""	"1173"	"14"	"37.000"	"30.000"	"2.27126608746529"	"23"	"0.004792"	"0.05645"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFNANLEGDK"	"[K].nFNANLEGDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"0.5357"	"0.0000"	"1"	"1"	"1"	"790.42792"	"1579.84856"	"1579.84804"	"0.33"	"0.00026"	"8/94"	"8"	"94"	"257158.64251709"	"HCD"	"MS2"	"18.01707"	"24.1"	"100.000"	"65.5682"	"21675"	"21675"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"26.1"	""	"35.4"	""	"39.2"	""	"46.7"	"46.6"	""	"1173"	"28"	"37.000"	"30.000"	"0.0885662010417273"	"27"	"0"	"6.998E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEYLVNEK"	"[K].qVEYLVNEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"790.45856"	"1579.90984"	"1579.90958"	"0.16"	"0.00013"	"11/90"	"11"	"90"	"228770.30670166"	"HCD"	"MS2"	"30.37425"	"21.5"	"100.000"	"77.5213"	"26514"	"26514"	"26497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"30.6"	""	"26.2"	""	"30.3"	""	"32.7"	"40.5"	""	"779"	"30"	"35.000"	"28.000"	"0.0372827090769341"	"18"	"9.9E-05"	"0.0006066"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVEYLVNEK"	"[K].qVEYLVNEk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.45990"	"1579.91252"	"1579.90958"	"1.86"	"0.00147"	"11/90"	"11"	"90"	"265607.780822754"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"77.4589"	"26461"	"26461"	"26439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"31.0"	""	"31.3"	""	"36.8"	""	"34.9"	"45.3"	""	"762"	"14"	"35.000"	"28.000"	"1.46192460532558"	"13"	"0.001049"	"0.008873"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIWDTAGQER"	"[K].fEIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"527.60150"	"1580.78995"	"1580.79064"	"-0.43"	"-0.00023"	"10/100"	"10"	"100"	"1100134.77099609"	"HCD"	"MS2"	"43.16932"	"17.5"	"100.000"	"102.6105"	"36645"	"36645"	"36637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"16.3"	""	"22.6"	""	"32.5"	""	"35.5"	"40.2"	""	"795"	"36"	"35.000"	"29.000"	"0.00896060086830591"	"18"	"0"	"0.0001097"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIWDTAGQER"	"[K].fEIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"790.89911"	"1580.79094"	"1580.79064"	"0.19"	"0.00015"	"8/100"	"8"	"100"	"502951.780578613"	"HCD"	"MS2"	"13.46307"	"31.2"	"100.000"	"102.6615"	"36642"	"36642"	"36625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.1"	""	"40.5"	""	"41.9"	""	"45.7"	""	"62.6"	"65.8"	""	"804"	"24"	"36.000"	"29.000"	"0.155319524775736"	"20"	"0"	"0.0002098"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIWDTAGQER"	"[K].fEIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"527.60187"	"1580.79105"	"1580.79064"	"0.26"	"0.00014"	"9/100"	"9"	"100"	"1166650.21240234"	"HCD"	"MS2"	"43.09256"	"16.3"	"100.000"	"102.4280"	"36548"	"36548"	"36531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"21.9"	""	"19.0"	""	"28.3"	""	"34.5"	"29.8"	""	"804"	"30"	"36.000"	"29.000"	"0.0380387338869049"	"17"	"9.9E-05"	"0.0006477"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIWDTAGQER"	"[K].fEIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"790.89923"	"1580.79119"	"1580.79064"	"0.35"	"0.00027"	"9/100"	"9"	"100"	"1394986.41320801"	"HCD"	"MS2"	"43.70694"	"64.3"	"100.000"	"102.5575"	"36624"	"36624"	"36611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.5"	""	"74.2"	""	"81.9"	""	"118.2"	"1.2"	"137.3"	"115.1"	""	"805"	"26"	"36.000"	"29.000"	"0.107836525073966"	"20"	"0"	"0.0002062"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIWDTAGQER"	"[K].fEIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"790.89929"	"1580.79131"	"1580.79064"	"0.42"	"0.00034"	"8/100"	"8"	"100"	"460238.183349609"	"HCD"	"MS2"	"16.71006"	"27.4"	"100.000"	"102.8744"	"36750"	"36750"	"36733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"29.4"	""	"32.5"	""	"50.9"	""	"57.3"	"55.2"	""	"805"	"23"	"36.000"	"29.000"	"0.215162154657281"	"20"	"0"	"0.0001557"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEIWDTAGQER"	"[K].fEIWDTAGQER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"M0RC99"	"Ras-related protein Rab-5A OS=Rattus norvegicus OX=10116 GN=Rab5a PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"790.89941"	"1580.79155"	"1580.79064"	"0.58"	"0.00046"	"10/100"	"10"	"100"	"1425376.44049072"	"HCD"	"MS2"	"42.38386"	"66.1"	"100.000"	"102.3520"	"36518"	"36518"	"36512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.3"	""	"84.1"	""	"80.9"	""	"104.7"	""	"137.2"	"133.7"	""	"816"	"30"	"36.000"	"29.000"	"0.038874083492165"	"20"	"0"	"5.959E-06"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGAEGGEGFVVK"	"[M].mLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.91302"	"1580.81877"	"1580.81916"	"-0.25"	"-0.00019"	"5/102"	"5"	"102"	"81575.0438232422"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"107.0465"	"38391"	"38391"	"38375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	""	"4.9"	""	""	""	"7.9"	""	"5.5"	"5.7"	""	"974"	"5"	"36.000"	"29.000"	"16.6543988504177"	"13"	"0.003904"	"0.04224"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGAEGGEGFVVK"	"[M].mLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"790.91547"	"1580.82366"	"1580.81916"	"2.84"	"0.00225"	"4/102"	"4"	"102"	"86689.7025146484"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"107.2790"	"38501"	"38501"	"38479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.6"	""	"4.4"	""	"3.8"	""	"9.4"	""	"6.5"	"6.5"	""	"1002"	"20"	"36.000"	"30.000"	"0.455866549588758"	"17"	"0.002875"	"0.03123"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8727"	"0.0000"	"1"	"1"	"1"	"527.62048"	"1580.84690"	"1580.84815"	"-0.79"	"-0.00042"	"13/118"	"13"	"118"	"2446050.89263916"	"HCD"	"MS2"	"9.101494"	"36.7"	"100.000"	"96.1333"	"33999"	"33999"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.1"	""	"49.8"	""	"36.9"	""	"63.7"	"0.0"	"70.9"	"60.3"	""	"1051"	"55"	"37.000"	"30.000"	"0.000173609193814846"	"23"	"0"	"2.131E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"527.62067"	"1580.84745"	"1580.84815"	"-0.45"	"-0.00024"	"13/118"	"13"	"118"	"414136.083068848"	"HCD"	"MS2"	"16.43588"	"12.1"	"100.000"	"96.4450"	"34125"	"34125"	"34110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"12.7"	""	"13.1"	""	"23.4"	"1.7"	"22.7"	"24.8"	""	"1049"	"43"	"37.000"	"30.000"	"0.00251041483423224"	"22"	"0"	"4.099E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8689"	"0.0000"	"1"	"1"	"1"	"790.92737"	"1580.84746"	"1580.84815"	"-0.44"	"-0.00035"	"9/118"	"9"	"118"	"511032.567260742"	"HCD"	"MS2"	"26.54267"	"30.6"	"100.000"	"96.0016"	"33978"	"33978"	"33963"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.1"	""	"35.0"	""	"37.9"	""	"43.5"	"0.6"	"63.4"	"59.1"	""	"1049"	"61"	"37.000"	"30.000"	"4.46421901037146E-05"	"25"	"0"	"1.71E-06"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"790.92737"	"1580.84746"	"1580.84815"	"-0.44"	"-0.00035"	"9/118"	"9"	"118"	"2116341.36853027"	"HCD"	"MS2"	"0"	"100.1"	"100.000"	"96.2605"	"34051"	"34051"	"34037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.6"	""	"127.1"	""	"125.6"	""	"172.7"	"1.2"	"186.6"	"177.7"	""	"1049"	"63"	"37.000"	"30.000"	"2.38092377933032E-05"	"24"	"0"	"1.485E-07"	"1.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"790.92743"	"1580.84758"	"1580.84815"	"-0.36"	"-0.00029"	"5/118"	"5"	"118"	"156881.844543457"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"96.5532"	"34169"	"34169"	"34149"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"13.8"	""	"15.6"	""	"24.5"	""	"18.6"	"21.6"	""	"1050"	"24"	"37.000"	"30.000"	"0.228117867690075"	"26"	"0.0007633"	"0.007415"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.6825"	"0.0000"	"1"	"1"	"1"	"527.62073"	"1580.84763"	"1580.84815"	"-0.33"	"-0.00017"	"13/118"	"13"	"118"	"2253941.98321533"	"HCD"	"MS2"	"6.988656"	"26.9"	"100.000"	"96.2437"	"34076"	"34076"	"34057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"32.1"	""	"37.8"	""	"48.9"	""	"43.8"	"54.0"	""	"1049"	"63"	"37.000"	"30.000"	"2.47027607695202E-05"	""	"0"	"9.926E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"790.92767"	"1580.84807"	"1580.84815"	"-0.05"	"-0.00004"	"10/118"	"10"	"118"	"2015578.60321045"	"HCD"	"MS2"	"0"	"94.0"	"100.000"	"96.3039"	"34101"	"34101"	"34084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.9"	""	"113.0"	""	"135.3"	""	"162.8"	""	"167.9"	"166.0"	""	"1067"	"64"	"37.000"	"30.000"	"2.09476073035686E-05"	"25"	"0"	"6.889E-08"	"1.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"790.92780"	"1580.84831"	"1580.84815"	"0.10"	"0.00008"	"10/118"	"10"	"118"	"527594.969909668"	"HCD"	"MS2"	"23.85364"	"31.3"	"100.000"	"95.9740"	"33935"	"33935"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.4"	""	"36.1"	""	"37.5"	""	"50.5"	""	"62.5"	"58.1"	""	"1055"	"72"	"37.000"	"30.000"	"3.14211780711553E-06"	"25"	"0"	"2.742E-07"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"527.62128"	"1580.84928"	"1580.84815"	"0.71"	"0.00038"	"12/118"	"12"	"118"	"315212.169799805"	"HCD"	"MS2"	"16.12547"	"10.7"	"100.000"	"96.5370"	"34194"	"34194"	"34175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"13.4"	""	"12.4"	""	"18.9"	"2.1"	"21.5"	"18.2"	""	"1054"	"36"	"37.000"	"30.000"	"0.0124397202888616"	"21"	"0"	"8.849E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGTDSQIFISR"	"[K].dLGTDSQIFISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"P50399"	"Rab GDP dissociation inhibitor beta OS=Rattus norvegicus OX=10116 GN=Gdi2 PE=1 SV=2"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"790.92847"	"1580.84966"	"1580.84815"	"0.95"	"0.00075"	"5/118"	"5"	"118"	"166505.81262207"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"96.5833"	"34212"	"34212"	"34202"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"14.6"	""	"11.1"	""	"20.5"	""	"20.0"	"21.7"	""	"1043"	"27"	"37.000"	"30.000"	"0.112267567465876"	"23"	"0.001103"	"0.009048"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEIMDGAPVK"	"[K].yEIMDGAPVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"790.94214"	"1580.87700"	"1580.87584"	"0.74"	"0.00058"	"7/78"	"7"	"78"	"238252.98260498"	"HCD"	"MS2"	"18.99769"	"20.9"	"100.000"	"90.9567"	"31905"	"31905"	"31883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"25.7"	""	"27.4"	""	"30.7"	"0.6"	"41.4"	"39.7"	""	"1072"	"37"	"37.000"	"30.000"	"0.0107192596212315"	"15"	"0"	"0.0001559"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEIMDGAPVK"	"[K].yEIMDGAPVk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"790.94263"	"1580.87798"	"1580.87584"	"1.35"	"0.00107"	"11/78"	"11"	"78"	"203647.768554688"	"HCD"	"MS2"	"13.12767"	"19.5"	"100.000"	"90.8703"	"31908"	"31908"	"31887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.8"	""	"29.5"	""	"23.9"	""	"33.3"	""	"36.4"	"36.7"	""	"1069"	"35"	"37.000"	"30.000"	"0.0173759160452515"	"18"	"0.001348"	"0.01128"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKEQILEEFSK"	"[K].TKEQILEEFSk.[V]"	"K11(TMT6plex)"	"1"	"1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"Q7TP47"	"Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1"	"1"	"2"	"2"	"0.2381"	"0.0000"	"1"	"1"	"1"	"790.95099"	"1580.89470"	"1580.87330"	"13.53"	"0.01070"	"11/116"	"11"	"116"	"126094.72845459"	"HCD"	"MS2"	"22.04084"	"12.0"	"100.000"	"106.4720"	"38181"	"38181"	"38167"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"8.6"	""	"14.1"	""	"26.4"	""	"21.0"	"25.9"	""	"911"	"42"	"36.000"	"29.000"	"0.00297500966730924"	"26"	"0.009781"	"0.1308"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPLDPIDTK"	"[R].sHPLDPIDTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.63934"	"1580.90348"	"1580.90483"	"-0.86"	"-0.00045"	"5/88"	"5"	"88"	"3512052.24206543"	"HCD"	"MS2"	"17.05763"	"100.6"	"100.000"	"47.6920"	"14418"	"14418"	"14394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.1"	""	"105.6"	""	"140.2"	""	"159.4"	""	"238.0"	"210.9"	""	"880"	"18"	"36.000"	"29.000"	"0.72352355821457"	"14"	"0.0001991"	"0.002498"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPLDPIDTK"	"[R].sHPLDPIDTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"Q66H61"	"Glutamine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Qars PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.63940"	"1580.90366"	"1580.90483"	"-0.74"	"-0.00039"	"6/88"	"6"	"88"	"2692300.39447021"	"HCD"	"MS2"	"15.49597"	"81.1"	"100.000"	"48.1044"	"14548"	"14548"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.7"	""	"96.0"	""	"107.6"	""	"135.5"	"2.7"	"179.1"	"160.5"	""	"880"	"30"	"36.000"	"29.000"	"0.0483562569350309"	"14"	"0"	"0.0002205"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLFRDDTK"	"[K].dLLFRDDTk.[C]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.63983"	"1580.90494"	"1580.90483"	"0.07"	"0.00004"	"8/86"	"8"	"86"	"1231019.69104004"	"HCD"	"MS2"	"32.62992"	"52.9"	"100.000"	"72.8204"	"24611"	"24611"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.7"	""	"105.4"	""	"77.8"	""	"53.3"	"1.3"	"62.5"	"57.9"	""	"858"	"7"	"36.000"	"29.000"	"8.44223218284237"	"13"	"0.009444"	"0.1253"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVQEQGTHPK"	"[K].vVQEQGTHPk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"527.64294"	"1580.91428"	"1580.91606"	"-1.13"	"-0.00059"	"7/92"	"7"	"92"	"3667145.97320557"	"HCD"	"MS2"	"44.07507"	"170.2"	"100.000"	"26.4230"	"5840"	"5840"	"5833"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"237.8"	""	"245.4"	""	"270.6"	""	"268.2"	""	"296.4"	"295.6"	""	"817"	"40"	"36.000"	"29.000"	"0.00417053779094588"	"22"	"0"	"7.632E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYAMHWGTDSR"	"[K].iYAmHWGTDSR.[L]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"2"	"P54311"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4"	"P54311; P54313"	"Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Gnb1 PE=1 SV=4; Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Gnb2 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.92810"	"1581.76975"	"1581.76813"	"1.02"	"0.00054"	"9/84"	"9"	"84"	"1082766.69622803"	"HCD"	"MS2"	"13.9062"	"34.3"	"100.000"	"48.9269"	"14883"	"14883"	"14863"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.0"	""	"44.6"	""	"46.4"	""	"64.3"	""	"62.4"	"64.0"	""	"635"	"18"	"35.000"	"28.000"	"0.540435326415396"	"14"	"0.002588"	"0.02681"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQMQEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"791.39789"	"1581.78850"	"1581.78926"	"-0.48"	"-0.00038"	"10/106"	"10"	"106"	"428718.482971191"	"HCD"	"MS2"	"21.61117"	"33.7"	"100.000"	"63.6055"	"20845"	"20845"	"20821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.2"	""	"31.4"	""	"39.7"	""	"40.4"	"0.6"	"84.3"	"72.7"	""	"806"	"50"	"36.000"	"29.000"	"0.000437829526317678"	"29"	"0"	"9.364E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQMQEFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"791.39801"	"1581.78874"	"1581.78926"	"-0.32"	"-0.00026"	"10/106"	"10"	"106"	"462693.956481934"	"HCD"	"MS2"	"13.0278"	"35.4"	"100.000"	"63.6134"	"20880"	"20880"	"20857"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"40.2"	""	"37.0"	""	"49.4"	""	"79.6"	"79.3"	""	"807"	"70"	"36.000"	"29.000"	"4.06296928381704E-06"	"25"	"0"	"1.785E-07"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGHLSLQDNR"	"[R].dPTGHLSLQDNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"527.94397"	"1581.81736"	"1581.81825"	"-0.56"	"-0.00030"	"6/112"	"6"	"112"	"1329602.40039063"	"HCD"	"MS2"	"20.36177"	"41.9"	"100.000"	"42.4762"	"12298"	"12298"	"12271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.8"	""	"52.2"	""	"51.8"	""	"67.8"	"0.1"	"82.8"	"85.4"	""	"928"	"20"	"36.000"	"29.000"	"0.43104040346589"	"15"	"0"	"0.0002569"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGHLSLQDNR"	"[R].dPTGHLSLQDNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"P21139"	"Alpha-mannosidase 2C1 OS=Rattus norvegicus OX=10116 GN=Man2c1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"527.94403"	"1581.81754"	"1581.81825"	"-0.45"	"-0.00024"	"5/112"	"5"	"112"	"1568603.12353516"	"HCD"	"MS2"	"29.50229"	"48.5"	"100.000"	"42.6259"	"12325"	"12325"	"12298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.3"	""	"65.3"	""	"62.7"	""	"79.8"	"1.4"	"86.6"	"91.5"	""	"924"	"29"	"36.000"	"29.000"	"0.0630437409104083"	"14"	"0"	"5.796E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWVQETMAK"	"[K].dWVQETmAk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"791.41876"	"1581.83025"	"1581.83470"	"-2.81"	"-0.00223"	"8/84"	"8"	"84"	"144196.804321289"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"68.5220"	"22871"	"22871"	"22842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"5.7"	""	"8.2"	""	"46.3"	""	"21.7"	"17.7"	""	"956"	"17"	"36.000"	"29.000"	"0.955933973684452"	"15"	"0.00714"	"0.09152"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWVQETMAK"	"[K].dWVQETmAk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.0909"	"0.0000"	"1"	"1"	"3"	"791.41895"	"1581.83061"	"1581.83470"	"-2.58"	"-0.00204"	"4/84"	"4"	"84"	"123773.656982422"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"68.8216"	"22993"	"22993"	"22970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"8.4"	""	"9.8"	""	"31.1"	""	"19.5"	"19.0"	""	"979"	"11"	"36.000"	"29.000"	"4.2830455797383"	"15"	"0.004751"	"0.05579"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DWVQETMAK"	"[K].dWVQETmAk.[N]"	"N-Term(TMT6plex); M7(Oxidation); K9(TMT6plex)"	"1"	"1"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"P06866"	"Haptoglobin OS=Rattus norvegicus OX=10116 GN=Hp PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"791.41937"	"1581.83147"	"1581.83470"	"-2.04"	"-0.00162"	"11/84"	"11"	"84"	"153557.841369629"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"68.4886"	"22825"	"22825"	"22796"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.7"	""	"6.6"	""	"11.9"	""	"51.4"	""	"26.3"	"19.7"	""	"971"	"27"	"36.000"	"29.000"	"0.108190526497073"	"21"	"0.0005161"	"0.006736"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTSLNQAALYR"	"[R].dTTSLNQAALYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.42511"	"1581.84294"	"1581.84340"	"-0.29"	"-0.00023"	"9/106"	"9"	"106"	"273533.154541016"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"63.1219"	"20648"	"20648"	"20625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.6"	""	"26.9"	""	"22.0"	""	"30.4"	""	"41.5"	"34.9"	""	"1016"	"64"	"37.000"	"30.000"	"2.00384309454241E-05"	"17"	"0"	"3.832E-07"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTTSLNQAALYR"	"[R].dTTSLNQAALYR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.42572"	"1581.84416"	"1581.84340"	"0.48"	"0.00038"	"14/106"	"14"	"106"	"222413.400634766"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"63.0651"	"20657"	"20657"	"20636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"18.4"	""	"20.4"	""	"29.5"	""	"31.5"	"27.6"	""	"1019"	"47"	"37.000"	"30.000"	"0.000982073943270783"	"15"	"0"	"3.808E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFPDDPYEK"	"[K].lFPDDPYEk.[A]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"791.43115"	"1581.85503"	"1581.85648"	"-0.92"	"-0.00073"	"7/72"	"7"	"72"	"480775.79309082"	"HCD"	"MS2"	"0"	"39.0"	"100.000"	"101.7705"	"36282"	"36282"	"36264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"54.0"	""	"55.7"	""	"55.1"	"0.4"	"66.2"	"72.2"	""	"963"	"28"	"36.000"	"29.000"	"0.0823372374215973"	"16"	"0.002799"	"0.02961"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"527.96436"	"1581.87851"	"1581.87979"	"-0.80"	"-0.00042"	"11/130"	"11"	"130"	"467362.11315918"	"HCD"	"MS2"	"20.18131"	"12.5"	"100.000"	"80.8821"	"27853"	"27853"	"27830"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.8"	""	"10.6"	""	"17.2"	""	"20.8"	""	"21.7"	"33.7"	""	"927"	"23"	"36.000"	"29.000"	"0.224931219825143"	"24"	"9.9E-05"	"0.0008139"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.5417"	"0.0000"	"1"	"1"	"1"	"791.44305"	"1581.87883"	"1581.87979"	"-0.60"	"-0.00048"	"8/118"	"8"	"118"	"322979.448364258"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"80.0294"	"27534"	"27534"	"27509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"19.1"	""	"19.6"	""	"43.5"	""	"36.6"	"37.7"	""	"931"	"24"	"36.000"	"29.000"	"0.187033622450181"	"25"	"9.9E-05"	"0.0007278"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"791.44305"	"1581.87883"	"1581.87979"	"-0.60"	"-0.00048"	"7/118"	"7"	"118"	"674251.454345703"	"HCD"	"MS2"	"0"	"33.6"	"100.000"	"80.4513"	"27677"	"27677"	"27660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"21.6"	""	"24.6"	""	"73.1"	"0.8"	"93.4"	"82.4"	""	"931"	"54"	"36.000"	"29.000"	"0.000201335188346797"	""	"0"	"4.583E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"527.96454"	"1581.87906"	"1581.87979"	"-0.46"	"-0.00024"	"11/130"	"11"	"130"	"464889.139160156"	"HCD"	"MS2"	"29.19597"	"13.4"	"100.000"	"80.9649"	"27914"	"27914"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"14.7"	""	"15.9"	""	"22.4"	""	"22.1"	"40.5"	""	"922"	"22"	"36.000"	"29.000"	"0.262241201119011"	"24"	"9.9E-05"	"0.0004535"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"527.96460"	"1581.87925"	"1581.87979"	"-0.34"	"-0.00018"	"12/118"	"12"	"118"	"858307.265197754"	"HCD"	"MS2"	"12.12808"	"14.8"	"100.000"	"80.5270"	"27708"	"27708"	"27689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"12.1"	""	"17.1"	""	"27.4"	""	"26.7"	"41.2"	""	"941"	"30"	"36.000"	"29.000"	"0.0442139817620663"	"23"	"0"	"2.259E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"791.44330"	"1581.87932"	"1581.87979"	"-0.29"	"-0.00023"	"9/118"	"9"	"118"	"924241.337402344"	"HCD"	"MS2"	"0"	"42.8"	"100.000"	"80.3125"	"27648"	"27648"	"27636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"21.7"	""	"34.5"	""	"108.2"	"1.7"	"114.4"	"101.4"	""	"941"	"51"	"36.000"	"29.000"	"0.00036187587215485"	""	"0"	"0.0001095"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"3"	"3"	"0.0588"	"0.0000"	"1"	"1"	"1"	"527.96466"	"1581.87943"	"1581.87979"	"-0.23"	"-0.00012"	"10/130"	"10"	"130"	"612254.80456543"	"HCD"	"MS2"	"39.42441"	"19.0"	"100.000"	"81.1935"	"27979"	"27979"	"27952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.5"	""	"24.5"	""	"23.2"	""	"33.0"	""	"34.5"	"45.6"	""	"941"	"17"	"36.000"	"29.000"	"0.842480054323607"	"29"	"0.0001686"	"0.001723"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"791.44336"	"1581.87944"	"1581.87979"	"-0.22"	"-0.00017"	"10/118"	"10"	"118"	"759119.146057129"	"HCD"	"MS2"	"0"	"37.4"	"100.000"	"80.1612"	"27560"	"27560"	"27540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.1"	""	"21.5"	""	"29.4"	""	"86.2"	""	"97.4"	"96.5"	""	"941"	"58"	"36.000"	"29.000"	"7.33769452580083E-05"	"24"	"0"	"5.879E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"791.44342"	"1581.87956"	"1581.87979"	"-0.14"	"-0.00011"	"9/118"	"9"	"118"	"200273.385559082"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"79.8573"	"27436"	"27436"	"27415"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"10.6"	""	"11.8"	""	"27.8"	""	"22.8"	"28.5"	""	"947"	"7"	"36.000"	"29.000"	"9.91562247845397"	"14"	"0.003529"	"0.03905"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.6452"	"0.0000"	"1"	"1"	"1"	"527.96472"	"1581.87961"	"1581.87979"	"-0.11"	"-0.00006"	"13/118"	"13"	"118"	"866474.004516602"	"HCD"	"MS2"	"9.441329"	"15.2"	"100.000"	"80.6078"	"27768"	"27768"	"27748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.2"	""	"12.2"	""	"18.0"	""	"28.7"	""	"25.0"	"47.0"	""	"947"	"31"	"36.000"	"29.000"	"0.0395658029132496"	"25"	"0"	"1.674E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.44348"	"1581.87969"	"1581.87979"	"-0.06"	"-0.00005"	"13/130"	"13"	"130"	"533499.569335938"	"HCD"	"MS2"	"0"	"25.6"	"100.000"	"81.0621"	"27925"	"27925"	"27907"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"30.8"	""	"30.5"	""	"43.8"	"1.8"	"44.6"	"47.0"	""	"962"	"42"	"36.000"	"29.000"	"0.00297265888466578"	"15"	"0"	"0.0002315"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"791.44354"	"1581.87981"	"1581.87979"	"0.01"	"0.00001"	"11/118"	"11"	"118"	"555012.784118652"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"80.6051"	"27767"	"27767"	"27748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.3"	""	"17.8"	""	"19.4"	""	"68.2"	"0.4"	"75.7"	"79.6"	""	"965"	"56"	"36.000"	"29.000"	"0.000134430346386387"	""	"0"	"7.876E-06"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"527.96490"	"1581.88016"	"1581.87979"	"0.24"	"0.00012"	"12/118"	"12"	"118"	"1562224.89379883"	"HCD"	"MS2"	"19.8902"	"26.2"	"100.000"	"80.2139"	"27581"	"27581"	"27570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"28.2"	""	"35.5"	""	"41.8"	""	"56.3"	"60.0"	""	"957"	"29"	"36.000"	"29.000"	"0.0646966721488462"	"22"	"0"	"1.582E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLEEVPSALPR"	"[K].nQLEEVPSALPR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"Q9EQP5"	"Prolargin OS=Rattus norvegicus OX=10116 GN=Prelp PE=2 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"527.96497"	"1581.88034"	"1581.87979"	"0.35"	"0.00019"	"9/118"	"9"	"118"	"1607365.84368896"	"HCD"	"MS2"	"18.42958"	"26.8"	"100.000"	"80.2828"	"27637"	"27637"	"27624"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"32.0"	""	"41.6"	""	"41.8"	""	"53.0"	"55.9"	""	"957"	"22"	"36.000"	"29.000"	"0.283062241952964"	"21"	"0"	"8.566E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"791.44391"	"1581.88054"	"1581.87979"	"0.48"	"0.00038"	"15/130"	"15"	"130"	"459283.236755371"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"81.2048"	"28010"	"28010"	"27992"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.8"	""	"25.2"	""	"28.7"	""	"40.5"	""	"45.2"	"41.9"	""	"953"	"56"	"36.000"	"29.000"	"0.000114041495792717"	"18"	"0"	"3.641E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"791.44397"	"1581.88066"	"1581.87979"	"0.55"	"0.00044"	"8/130"	"8"	"130"	"303173.494445801"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"80.7668"	"27806"	"27806"	"27782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"20.3"	""	"18.6"	""	"32.4"	""	"38.8"	"32.3"	""	"953"	"49"	"36.000"	"29.000"	"0.000611030522635594"	""	"0"	"0.0001909"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.44409"	"1581.88091"	"1581.87979"	"0.71"	"0.00056"	"4/130"	"4"	"130"	"97505.0640258789"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"81.3687"	"28050"	"28050"	"28027"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.0"	""	"10.7"	""	"10.2"	""	"12.1"	""	"11.9"	"16.4"	""	"956"	"11"	"36.000"	"29.000"	"3.81441460514093"	"13"	"0.0009352"	"0.008096"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQIAPDSGGLPER"	"[K].iQIAPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"Q32PX7"	"Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"791.44440"	"1581.88152"	"1581.87979"	"1.09"	"0.00087"	"12/130"	"12"	"130"	"393374.361816406"	"HCD"	"MS2"	"4.817072"	"19.6"	"100.000"	"80.9049"	"27889"	"27889"	"27871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"29.8"	""	"17.2"	""	"36.1"	""	"34.0"	"34.9"	""	"948"	"37"	"36.000"	"29.000"	"0.0100179380488257"	"19"	"0"	"0.0003369"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAFSEEVNIK"	"[K].sAFSEEVNIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"791.44830"	"1581.88933"	"1581.88884"	"0.31"	"0.00024"	"8/86"	"8"	"86"	"208136.856384277"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"83.0478"	"28726"	"28726"	"28706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"21.7"	""	"24.6"	""	"34.9"	""	"39.3"	"38.3"	""	"875"	"25"	"36.000"	"29.000"	"0.142553556688379"	"22"	"9.9E-05"	"0.0004273"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAFSEEVNIK"	"[K].sAFSEEVNIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"527.96796"	"1581.88932"	"1581.88884"	"0.30"	"0.00016"	"7/86"	"7"	"86"	"589118.429870605"	"HCD"	"MS2"	"15.52904"	"25.4"	"100.000"	"82.9852"	"28701"	"28701"	"28677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"32.0"	""	"30.9"	""	"41.5"	"0.4"	"53.4"	"53.9"	""	"875"	"21"	"36.000"	"29.000"	"0.31767135637788"	"28"	"0.001615"	"0.01417"	"0.21"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAFSEEVNIK"	"[K].sAFSEEVNIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"791.44836"	"1581.88945"	"1581.88884"	"0.38"	"0.00030"	"6/86"	"6"	"86"	"135097.163879395"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"83.2012"	"28817"	"28817"	"28796"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"13.3"	""	"18.5"	""	"26.3"	""	"26.3"	"27.6"	""	"879"	"10"	"36.000"	"29.000"	"4.38489178050012"	"15"	"0.006958"	"0.08712"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAFSEEVNIK"	"[K].sAFSEEVNIk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"Q9Z2S9"	"Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"527.96814"	"1581.88987"	"1581.88884"	"0.65"	"0.00034"	"7/86"	"7"	"86"	"580459.819641113"	"HCD"	"MS2"	"26.0493"	"24.7"	"100.000"	"83.0883"	"28771"	"28771"	"28748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"31.7"	""	"32.0"	""	"47.4"	"1.3"	"53.3"	"41.4"	""	"875"	"24"	"36.000"	"29.000"	"0.177409984258668"	""	"0.0005161"	"0.006978"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAAAGYDVEK"	"[K].sLAAAGYDVEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"D4A3K5"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1"	"D4A3K5"	"Histone H1.1 OS=Rattus norvegicus OX=10116 GN=Hist1h1a PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"791.44897"	"1581.89067"	"1581.88884"	"1.16"	"0.00091"	"8/98"	"8"	"98"	"106317.79296875"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"74.9097"	"25430"	"25430"	"25403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"16.8"	""	"20.6"	""	"20.4"	""	"23.8"	"20.9"	""	"866"	"22"	"36.000"	"29.000"	"0.299562810407899"	"17"	"0.0009352"	"0.008393"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMTGVEQWPYR"	"[K].amTGVEQWPYR.[A]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.6552"	"0.0000"	"1"	"1"	"1"	"791.89746"	"1582.78765"	"1582.78853"	"-0.56"	"-0.00044"	"10/94"	"10"	"94"	"259866.474731445"	"HCD"	"MS2"	"12.71701"	"18.5"	"100.000"	"67.4312"	"22396"	"22396"	"22375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.6"	""	"21.9"	""	"22.0"	""	"39.7"	""	"35.9"	"30.5"	""	"772"	"29"	"35.000"	"28.000"	"0.0478175482400723"	"24"	"0.004275"	"0.05026"	"0.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMTGVEQWPYR"	"[K].amTGVEQWPYR.[A]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"791.89777"	"1582.78826"	"1582.78853"	"-0.17"	"-0.00014"	"10/94"	"10"	"94"	"260240.984313965"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"67.7180"	"22543"	"22543"	"22525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"21.6"	""	"16.8"	""	"34.6"	""	"30.3"	"24.2"	""	"776"	"29"	"35.000"	"28.000"	"0.0534357273930851"	"19"	"0.006958"	"0.08782"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEqMQEFR.[A]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"1"	"1"	"791.89801"	"1582.78874"	"1582.77327"	"9.77"	"0.00774"	"6/106"	"6"	"106"	"180751.622070313"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"63.8760"	"20955"	"20955"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"17.1"	""	"23.1"	""	"19.8"	"1.1"	"32.9"	"36.8"	""	"771"	"20"	"35.000"	"28.000"	"0.397213849430243"	"18"	"0.003786"	"0.04046"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISQEQMQEFR"	"[K].gISQEQMqEFR.[A]"	"N-Term(TMT6plex); Q8(Deamidated)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.5500"	"0.0000"	"1"	"2"	"2"	"791.89801"	"1582.78874"	"1582.77327"	"9.77"	"0.00774"	"6/106"	"6"	"106"	"180751.622070313"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"63.8760"	"20955"	"20955"	"20934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"17.1"	""	"23.1"	""	"19.8"	"1.1"	"32.9"	"36.8"	""	"771"	"20"	"35.000"	"28.000"	"0.399967204297844"	"18"	"0.003043"	"0.03261"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AMTGVEQWPYR"	"[K].amTGVEQWPYR.[A]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"Q6P502"	"T-complex protein 1 subunit gamma OS=Rattus norvegicus OX=10116 GN=Cct3 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"791.89832"	"1582.78935"	"1582.78853"	"0.52"	"0.00041"	"6/94"	"6"	"94"	"255897.194824219"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"67.7375"	"22520"	"22520"	"22499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"20.7"	""	"20.4"	""	"34.6"	""	"31.7"	"24.9"	""	"782"	"26"	"35.000"	"28.000"	"0.109692455243912"	"23"	"0.007412"	"0.09409"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTmNLGGSLTR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.90607"	"1582.80486"	"1582.80564"	"-0.49"	"-0.00039"	"13/142"	"13"	"142"	"1270200.23266602"	"HCD"	"MS2"	"100"	"56.8"	"100.000"	"39.0219"	"10868"	"10868"	"10845"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.7"	""	"69.8"	""	"92.4"	""	"132.8"	""	"87.4"	"79.1"	""	"853"	"65"	"36.000"	"29.000"	"1.4319209247462E-05"	"17"	"0"	"9.248E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSGTMNLGGSLTR"	"[K].sGSGTmNLGGSLTR.[Q]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"Q5XI32"	"F-actin-capping protein subunit beta OS=Rattus norvegicus OX=10116 GN=Capzb PE=1 SV=1"	"0"	"2"	"2"	"0.9880"	"0.0000"	"1"	"1"	"1"	"791.90625"	"1582.80522"	"1582.80564"	"-0.26"	"-0.00021"	"12/142"	"12"	"142"	"1441713.23352051"	"HCD"	"MS2"	"0"	"61.1"	"100.000"	"38.9414"	"10871"	"10871"	"10845"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"81.9"	""	"104.4"	""	"133.5"	"0.4"	"91.5"	"91.3"	""	"851"	"83"	"36.000"	"29.000"	"2.19735165125266E-07"	"18"	"0"	"8.634E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYSLQENTSGLI"	"[R].eYSLQENTSGLI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"791.91095"	"1582.81462"	"1582.81618"	"-0.99"	"-0.00078"	"5/108"	"5"	"108"	"89606.7506713867"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"110.2653"	"39614"	"39614"	"39591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"5.7"	""	"8.3"	""	"7.8"	""	"11.6"	"13.0"	""	"898"	"22"	"36.000"	"29.000"	"0.283299847671607"	"17"	"0.001615"	"0.01438"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALMVYDITR"	"[R].gAAGALmVYDITR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"791.92578"	"1582.84429"	"1582.84604"	"-1.11"	"-0.00088"	"6/100"	"6"	"100"	"132410.002685547"	"HCD"	"MS2"	"30.8009"	"10.7"	"100.000"	"91.4414"	"32102"	"32102"	"32074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"13.8"	""	"11.5"	""	"21.9"	""	"23.6"	"21.8"	""	"957"	"19"	"36.000"	"29.000"	"0.546867283196906"	"16"	"0.0001991"	"0.005455"	"0.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGAMQLYSVDR"	"[R].vVGAmQLYSVDR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"791.92584"	"1582.84441"	"1582.84604"	"-1.03"	"-0.00082"	"7/104"	"7"	"104"	"337110.805114746"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"77.2876"	"26422"	"26422"	"26406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"23.1"	""	"19.0"	""	"39.6"	"0.4"	"38.8"	"41.3"	""	"956"	"26"	"36.000"	"29.000"	"0.111796420007917"	"18"	"0.002711"	"0.02834"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGAMQLYSVDR"	"[R].vVGAmQLYSVDR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.92590"	"1582.84453"	"1582.84604"	"-0.96"	"-0.00076"	"9/104"	"9"	"104"	"270487.064819336"	"HCD"	"MS2"	"21.52965"	"15.8"	"100.000"	"76.3824"	"26029"	"26029"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"22.9"	""	"15.2"	""	"32.6"	""	"29.8"	"33.0"	""	"956"	"17"	"36.000"	"29.000"	"0.883950399871522"	"14"	"0.003208"	"0.0345"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALMVYDITR"	"[R].gAAGALmVYDITR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"791.92615"	"1582.84502"	"1582.84604"	"-0.65"	"-0.00051"	"4/100"	"4"	"100"	"76369.4165039063"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"91.6369"	"32217"	"32217"	"32198"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"8.1"	""	"4.9"	""	"13.0"	""	"11.6"	"9.9"	""	"938"	"10"	"36.000"	"29.000"	"5.11885517794467"	"16"	"0.004357"	"0.05117"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGALMVYDITR"	"[R].gAAGALmVYDITR.[R]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"P61107"	"Ras-related protein Rab-14 OS=Rattus norvegicus OX=10116 GN=Rab14 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.92670"	"1582.84612"	"1582.84604"	"0.05"	"0.00004"	"6/100"	"6"	"100"	"128211.358581543"	"HCD"	"MS2"	"18.97957"	"9.0"	"100.000"	"91.3299"	"32093"	"32093"	"32072"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.6"	""	"6.2"	""	"8.8"	""	"24.3"	""	"20.4"	"19.0"	""	"930"	"17"	"36.000"	"29.000"	"0.908767846935559"	"14"	"0.001951"	"0.01701"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGAMQLYSVDR"	"[R].vVGAmQLYSVDR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.92670"	"1582.84612"	"1582.84604"	"0.05"	"0.00004"	"6/104"	"6"	"104"	"265618.585205078"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"76.7119"	"26163"	"26163"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"17.5"	""	"17.0"	""	"26.9"	""	"21.6"	"34.8"	""	"930"	"13"	"36.000"	"29.000"	"2.47430340559059"	"13"	"0.002588"	"0.02673"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VVGAMQLYSVDR"	"[R].vVGAmQLYSVDR.[K]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"791.92676"	"1582.84624"	"1582.84604"	"0.12"	"0.00010"	"5/104"	"5"	"104"	"166432.212219238"	"HCD"	"MS2"	"36.25949"	"10.6"	"100.000"	"76.4111"	"26072"	"26072"	"26042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"12.1"	""	"16.7"	""	"20.0"	""	"19.0"	"17.0"	""	"924"	"9"	"36.000"	"29.000"	"5.8296432098089"	"13"	"0.005832"	"0.07139"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TISPMVMDAK"	"[K].tISPmVmDAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"791.93250"	"1582.85771"	"1582.85847"	"-0.48"	"-0.00038"	"5/86"	"5"	"86"	"167667.515014648"	"HCD"	"MS2"	"100"	"15.4"	"100.000"	"51.7513"	"16029"	"16029"	"16006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"18.2"	""	"19.7"	""	"30.4"	""	"36.8"	"28.5"	""	"945"	"1"	"36.000"	"29.000"	"40.2162723050622"	"13"	"0.006814"	"0.08462"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPmVmDAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"791.93298"	"1582.85869"	"1582.85847"	"0.14"	"0.00011"	"7/86"	"7"	"86"	"395506.91583252"	"HCD"	"MS2"	"24.99444"	"28.3"	"100.000"	"52.0764"	"16161"	"16161"	"16132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"26.3"	""	"29.0"	""	"62.3"	""	"61.8"	"57.2"	""	"977"	"33"	"36.000"	"29.000"	"0.0258145505492175"	"21"	"0.002189"	"0.02048"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPmVmDAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"791.93311"	"1582.85893"	"1582.85847"	"0.29"	"0.00023"	"7/86"	"7"	"86"	"364532.383850098"	"HCD"	"MS2"	"19.19589"	"26.1"	"100.000"	"51.6208"	"16010"	"16010"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"23.1"	""	"25.2"	""	"50.2"	""	"57.3"	"65.4"	""	"975"	"27"	"36.000"	"29.000"	"0.108636213526927"	"17"	"0.003001"	"0.03251"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TISPMVMDAK"	"[K].tISPmVmDAk.[A]"	"N-Term(TMT6plex); M5(Oxidation); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"791.93323"	"1582.85918"	"1582.85847"	"0.45"	"0.00035"	"9/86"	"9"	"86"	"218322.429016113"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"51.9338"	"16137"	"16137"	"16107"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.0"	""	"16.3"	""	"20.8"	""	"29.9"	""	"30.5"	"27.0"	""	"964"	"20"	"36.000"	"29.000"	"0.463497118180927"	"23"	"0.003317"	"0.03673"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vMIYQDEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"791.94879"	"1582.89031"	"1582.89149"	"-0.75"	"-0.00059"	"13/74"	"13"	"74"	"205035.610656738"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"87.2501"	"30415"	"30415"	"30398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"24.2"	""	"19.8"	""	"26.8"	""	"35.1"	"47.9"	""	"847"	"44"	"36.000"	"29.000"	"0.00179000158141483"	"21"	"0"	"0.0002081"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vMIYQDEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"528.30170"	"1582.89054"	"1582.89149"	"-0.60"	"-0.00032"	"9/74"	"9"	"74"	"754875.867248535"	"HCD"	"MS2"	"31.29207"	"25.8"	"100.000"	"87.3552"	"30492"	"30492"	"30468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"36.9"	""	"32.8"	""	"33.5"	""	"44.5"	"59.9"	""	"831"	"36"	"36.000"	"29.000"	"0.0111576061717111"	"21"	"0.002084"	"0.01878"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vMIYQDEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"528.30182"	"1582.89090"	"1582.89149"	"-0.37"	"-0.00019"	"10/74"	"10"	"74"	"602528.729980469"	"HCD"	"MS2"	"42.54562"	"23.1"	"100.000"	"87.3790"	"30467"	"30467"	"30445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"28.4"	""	"30.8"	""	"39.2"	""	"41.3"	"51.6"	""	"828"	"34"	"36.000"	"29.000"	"0.0161435982484089"	"17"	"0.0001686"	"0.001254"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vMIYQDEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"791.94910"	"1582.89092"	"1582.89149"	"-0.36"	"-0.00028"	"7/74"	"7"	"74"	"141848.12121582"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"87.1592"	"30413"	"30413"	"30395"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"21.9"	""	"13.5"	""	"18.4"	""	"34.4"	"27.5"	""	"828"	"17"	"36.000"	"29.000"	"0.785236251381414"	"18"	"0.003786"	"0.04079"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vMIYQDEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"791.94952"	"1582.89177"	"1582.89149"	"0.18"	"0.00014"	"8/74"	"8"	"74"	"597004.628295898"	"HCD"	"MS2"	"0"	"53.7"	"100.000"	"87.5614"	"30540"	"30540"	"30521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.4"	""	"72.7"	""	"45.1"	""	"76.8"	""	"113.3"	"132.8"	""	"837"	"53"	"36.000"	"29.000"	"0.00019350645745559"	"24"	"0"	"2.553E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vMIYQDEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.8727"	"0.0000"	"1"	"1"	"1"	"791.94965"	"1582.89202"	"1582.89149"	"0.33"	"0.00026"	"16/74"	"16"	"74"	"675941.992980957"	"HCD"	"MS2"	"2.755056"	"57.0"	"100.000"	"87.4566"	"30533"	"30533"	"30514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"68.0"	""	"52.0"	""	"77.9"	"0.9"	"130.7"	"131.3"	""	"838"	"55"	"36.000"	"29.000"	"0.000136525577719842"	"23"	"0"	"2.737E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQNPTLLAELR"	"[K].aQQNPTLLAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.95929"	"1582.91130"	"1582.91142"	"-0.07"	"-0.00006"	"10/116"	"10"	"116"	"157188.760192871"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"85.9718"	"29907"	"29907"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"10.9"	""	"14.3"	""	"18.1"	""	"21.5"	"26.5"	""	"801"	"13"	"36.000"	"29.000"	"2.20598482410364"	"13"	"0.001049"	"0.008601"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQNPTLLAELR"	"[K].aQQNPTLLAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"791.96002"	"1582.91277"	"1582.91142"	"0.85"	"0.00067"	"6/116"	"6"	"116"	"171678.686096191"	"HCD"	"MS2"	"24.84708"	"10.7"	"100.000"	"85.9827"	"29941"	"29941"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.1"	""	"13.6"	""	"13.1"	""	"16.9"	""	"22.4"	"20.5"	""	"788"	"10"	"35.000"	"28.000"	"3.75401688625319"	"13"	"0.001488"	"0.0127"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQQNPTLLAELR"	"[K].aQQNPTLLAELR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"P84060"	"Dystrobrevin beta OS=Rattus norvegicus OX=10116 GN=Dtnb PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"791.96075"	"1582.91423"	"1582.91142"	"1.78"	"0.00141"	"7/116"	"7"	"116"	"162243.158447266"	"HCD"	"MS2"	"15.07458"	"11.4"	"100.000"	"85.8957"	"29876"	"29876"	"29854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"9.2"	""	"13.8"	""	"21.5"	""	"22.4"	"27.2"	""	"756"	"0"	"35.000"	"28.000"	"35.5215411393433"	"13"	"0.002588"	"0.02724"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.37689"	"1583.74651"	"1583.74888"	"-1.50"	"-0.00119"	"9/112"	"9"	"112"	"927677.86706543"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"111.3513"	"40070"	"40070"	"40044"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.3"	""	"4.8"	""	"5.5"	""	"9.2"	""	"10.8"	"11.0"	"NoQuanLabels"	"490"	"43"	"33.000"	"26.000"	"0.00123642017903065"	"15"	"0"	"5.958E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAGTLYTYPENWR"	"[M].aAGTLYTYPENWR.[A]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.37854"	"1583.74980"	"1583.74888"	"0.58"	"0.00046"	"9/112"	"9"	"112"	"938483.341247559"	"HCD"	"MS2"	"6.283881"	"5.8"	"100.000"	"111.2706"	"40024"	"40024"	"40007"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"5.6"	""	"8.8"	""	"13.6"	""	"9.6"	"10.1"	"NoQuanLabels"	"528"	"47"	"34.000"	"27.000"	"0.000572273883672399"	"15"	"0"	"0.0002276"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.40216"	"1583.79704"	"1583.79705"	"0.00"	"0.00000"	"10/108"	"10"	"108"	"168506.664611816"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"60.1423"	"19473"	"19473"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"8.4"	""	"10.8"	""	"29.3"	""	"18.3"	"16.4"	""	"818"	"13"	"36.000"	"29.000"	"2.12678362582208"	"13"	"0.003317"	"0.03637"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"792.40234"	"1583.79741"	"1583.79705"	"0.23"	"0.00018"	"5/108"	"5"	"108"	"173210.59387207"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"59.7161"	"19300"	"19300"	"19273"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"11.7"	""	"11.2"	""	"30.3"	""	"19.9"	"23.1"	""	"825"	"2"	"36.000"	"29.000"	"26.694632899629"	"13"	"0.007443"	"0.09523"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"792.40277"	"1583.79827"	"1583.79705"	"0.77"	"0.00061"	"8/108"	"8"	"108"	"160466.830078125"	"HCD"	"MS2"	"26.78888"	"10.6"	"100.000"	"60.4530"	"19599"	"19599"	"19574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"8.9"	""	"14.2"	""	"28.6"	""	"20.6"	"18.0"	""	"822"	"6"	"36.000"	"29.000"	"9.88193110802849"	"15"	"0.004392"	"0.05146"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAMEMVLTGDR"	"[K].sLAmEmVLTGDR.[I]"	"N-Term(TMT6plex); M4(Oxidation); M6(Oxidation)"	"1"	"1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"P14604"	"Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Echs1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"792.40344"	"1583.79961"	"1583.79705"	"1.62"	"0.00128"	"8/108"	"8"	"108"	"196610.410339355"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"60.1676"	"19450"	"19450"	"19422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.7"	""	"12.5"	""	"12.4"	""	"32.3"	""	"17.7"	"19.3"	""	"824"	"21"	"36.000"	"29.000"	"0.33643193699974"	"21"	"0.003818"	"0.0417"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"792.41901"	"1583.83074"	"1583.83172"	"-0.62"	"-0.00049"	"8/90"	"8"	"90"	"1299528.57720947"	"HCD"	"MS2"	"5.526807"	"135.9"	"100.000"	"52.6088"	"16412"	"16412"	"16388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.5"	""	"134.7"	""	"149.5"	""	"250.7"	"0.2"	"267.8"	"265.7"	""	"922"	"37"	"36.000"	"29.000"	"0.00967611286350444"	"21"	"0"	"0.0002622"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"528.61511"	"1583.83078"	"1583.83172"	"-0.59"	"-0.00031"	"9/90"	"9"	"90"	"3026671.35723877"	"HCD"	"MS2"	"29.96844"	"93.2"	"100.000"	"52.6870"	"16444"	"16444"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"148.1"	""	"90.6"	""	"113.3"	""	"167.3"	""	"185.0"	"180.6"	""	"923"	"30"	"36.000"	"29.000"	"0.0450994977471107"	"23"	"0.0001991"	"0.002433"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"528.61511"	"1583.83078"	"1583.83172"	"-0.59"	"-0.00031"	"9/90"	"9"	"90"	"2808406.09417725"	"HCD"	"MS2"	"29.82325"	"92.4"	"100.000"	"53.0139"	"16543"	"16543"	"16522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.2"	""	"99.2"	""	"112.6"	""	"148.7"	"2.8"	"172.4"	"182.9"	""	"923"	"29"	"36.000"	"29.000"	"0.0585021336093396"	"23"	"0.0001991"	"0.002316"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"792.41925"	"1583.83122"	"1583.83172"	"-0.31"	"-0.00025"	"10/90"	"10"	"90"	"1150969.48138428"	"HCD"	"MS2"	"0"	"120.7"	"100.000"	"52.9402"	"16513"	"16513"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.7"	""	"123.0"	""	"123.4"	""	"220.6"	""	"229.7"	"248.5"	""	"923"	"38"	"36.000"	"29.000"	"0.00774768054363562"	"22"	"0"	"0.0001069"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"792.41931"	"1583.83135"	"1583.83172"	"-0.24"	"-0.00019"	"8/90"	"8"	"90"	"1777996.50244141"	"HCD"	"MS2"	"0"	"181.2"	"100.000"	"52.9057"	"16533"	"16533"	"16514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"263.5"	""	"179.7"	""	"195.1"	""	"309.1"	""	"375.3"	"400.8"	""	"923"	"47"	"36.000"	"29.000"	"0.00102842282138824"	"22"	"0"	"8.608E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDNELEK"	"[K].nYTDNELEk.[I]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.6905"	"0.0000"	"1"	"1"	"1"	"792.41980"	"1583.83232"	"1583.83172"	"0.38"	"0.00030"	"8/90"	"8"	"90"	"1909003.5657959"	"HCD"	"MS2"	"0"	"188.4"	"100.000"	"53.2371"	"16635"	"16635"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"277.5"	""	"183.9"	""	"215.8"	""	"311.1"	"0.8"	"384.5"	"415.0"	""	"944"	"42"	"36.000"	"29.000"	"0.00273490344713488"	"28"	"0"	"0.0001854"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKGDSAYNTR"	"[K].nkGDSAYNTR.[T]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"528.62250"	"1583.85294"	"1583.85419"	"-0.79"	"-0.00042"	"5/100"	"5"	"100"	"290050.76184082"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"22.3577"	"4237"	"4237"	"4230"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.4"	""	"26.6"	""	"24.9"	""	"37.7"	""	"37.3"	"38.1"	""	"965"	"11"	"36.000"	"29.000"	"4.17347020809272"	"13"	"0.008289"	"0.1061"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"792.43109"	"1583.85491"	"1583.85905"	"-2.62"	"-0.00207"	"8/134"	"8"	"134"	"351883.206298828"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"66.9269"	"22191"	"22191"	"22164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"21.6"	""	"22.4"	""	"34.9"	"1.0"	"36.2"	"41.2"	""	"960"	"41"	"36.000"	"29.000"	"0.00427800450304198"	"23"	"0"	"0.0002794"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"792.43250"	"1583.85771"	"1583.85905"	"-0.84"	"-0.00067"	"9/134"	"9"	"134"	"240274.799865723"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"66.9050"	"22214"	"22214"	"22187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"17.2"	""	"16.5"	""	"20.4"	""	"26.8"	"24.8"	""	"977"	"33"	"36.000"	"29.000"	"0.0265377786934054"	"17"	"9.9E-05"	"0.0009251"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"792.43317"	"1583.85906"	"1583.85905"	"0.00"	"0.00000"	"8/134"	"8"	"134"	"505761.808044434"	"HCD"	"MS2"	"13.34513"	"29.8"	"100.000"	"67.2401"	"22318"	"22318"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.2"	""	"31.8"	""	"35.2"	""	"57.7"	""	"57.9"	"58.6"	""	"987"	"39"	"36.000"	"29.000"	"0.0064311280516621"	"19"	"9.9E-05"	"0.0006848"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQISPDSGGLPER"	"[K].vQISPDSGGLPER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"792.43347"	"1583.85967"	"1583.85905"	"0.39"	"0.00031"	"6/134"	"6"	"134"	"566754.260742188"	"HCD"	"MS2"	"8.532626"	"27.8"	"100.000"	"67.2228"	"22342"	"22342"	"22320"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"27.2"	""	"36.8"	""	"57.8"	""	"52.3"	"52.6"	""	"981"	"43"	"36.000"	"29.000"	"0.0024301831858975"	"24"	"9.9E-05"	"0.0006794"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQETYETLK"	"[R].nQETYETLk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.6222"	"0.0000"	"1"	"1"	"1"	"792.43524"	"1583.86321"	"1583.86811"	"-3.09"	"-0.00245"	"8/88"	"8"	"88"	"471030.426269531"	"HCD"	"MS2"	"0"	"45.8"	"100.000"	"52.3876"	"16288"	"16288"	"16259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.7"	""	"44.4"	""	"50.1"	""	"82.4"	"3.4"	"105.1"	"94.6"	""	"942"	"45"	"36.000"	"29.000"	"0.00136151022459414"	""	"0"	"0.0001057"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQETYETLK"	"[R].nQETYETLk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"792.43695"	"1583.86662"	"1583.86811"	"-0.94"	"-0.00074"	"8/88"	"8"	"88"	"435180.152893066"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"52.4869"	"16328"	"16328"	"16307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.2"	""	"37.6"	""	"47.1"	""	"77.6"	"0.5"	"91.2"	"111.5"	""	"941"	"51"	"36.000"	"29.000"	"0.000378059040488333"	"22"	"0"	"2.694E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQETYETLK"	"[R].nQETYETLk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"P20411"	"High affinity immunoglobulin epsilon receptor subunit gamma OS=Rattus norvegicus OX=10116 GN=Fcer1g PE=1 SV=1"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"792.43719"	"1583.86711"	"1583.86811"	"-0.63"	"-0.00050"	"8/88"	"8"	"88"	"359760.312683105"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"52.2336"	"16259"	"16259"	"16235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"30.3"	""	"37.0"	""	"71.0"	""	"87.8"	"78.7"	""	"938"	"51"	"36.000"	"29.000"	"0.000378593229186705"	"26"	"0"	"7.235E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"792.94293"	"1584.87859"	"1584.87945"	"-0.55"	"-0.00043"	"14/110"	"14"	"110"	"259418.414306641"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"103.1293"	"36833"	"36833"	"36810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"15.9"	""	"13.2"	""	"21.7"	"1.3"	"17.1"	"69.4"	""	"893"	"41"	"36.000"	"29.000"	"0.00397943543876717"	"25"	"0"	"0.0002683"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"792.94299"	"1584.87871"	"1584.87945"	"-0.47"	"-0.00037"	"11/110"	"11"	"110"	"200371.415405273"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"103.6990"	"37075"	"37075"	"37054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"7.9"	""	"8.8"	""	"10.9"	""	"13.2"	"47.3"	""	"893"	"26"	"36.000"	"29.000"	"0.103710197957345"	""	"0.0009352"	"0.008375"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"792.94318"	"1584.87908"	"1584.87945"	"-0.24"	"-0.00019"	"5/110"	"5"	"110"	"219168.923461914"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"103.3913"	"36952"	"36952"	"36927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"12.6"	""	"11.3"	""	"14.6"	"1.1"	"19.2"	"50.7"	""	"883"	"26"	"36.000"	"29.000"	"0.119105195942443"	"24"	"9.9E-05"	"0.0009278"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIDLPADTVEGLR"	"[R].gIDLPADTVEGLR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"Q920P6"	"Adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Ada PE=1 SV=3"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"792.94330"	"1584.87932"	"1584.87945"	"-0.08"	"-0.00007"	"7/110"	"7"	"110"	"215794.285400391"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"103.4266"	"36949"	"36949"	"36930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"9.9"	""	"8.6"	""	"12.9"	"2.1"	"11.3"	"52.9"	""	"895"	"30"	"36.000"	"29.000"	"0.047730176425054"	"23"	"9.9E-05"	"0.0004473"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAVDPEPQVK"	"[K].gSAVDPEPQVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"792.95270"	"1584.89812"	"1584.89974"	"-1.02"	"-0.00081"	"9/94"	"9"	"94"	"309493.909912109"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"47.7104"	"14388"	"14388"	"14361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"29.6"	""	"30.8"	""	"30.4"	""	"45.1"	"34.2"	""	"802"	"25"	"36.000"	"29.000"	"0.116451308444024"	"22"	"0.0001991"	"0.004"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAVDPEPQVK"	"[K].gSAVDPEPQVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"Q6P747"	"Heterochromatin protein 1-binding protein 3 OS=Rattus norvegicus OX=10116 GN=Hp1bp3 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"792.95331"	"1584.89934"	"1584.89974"	"-0.25"	"-0.00020"	"7/94"	"7"	"94"	"287535.954589844"	"HCD"	"MS2"	"16.61927"	"21.3"	"100.000"	"47.3308"	"14271"	"14271"	"14257"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"25.6"	""	"37.0"	""	"32.7"	""	"43.2"	"39.5"	""	"792"	"26"	"35.000"	"28.000"	"0.100622519139753"	"16"	"0.0001991"	"0.002857"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"792.96564"	"1584.92400"	"1584.92489"	"-0.57"	"-0.00045"	"9/86"	"9"	"86"	"9775195.18273926"	"HCD"	"MS2"	"0"	"545.7"	"100.000"	"88.1138"	"30800"	"30800"	"30783"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1192.9"	""	"794.6"	""	"289.4"	""	"1012.5"	"1.9"	"1078.5"	"795.3"	""	"650"	"50"	"35.000"	"28.000"	"0.000349851194429696"	""	"0"	"1.461E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"528.97955"	"1584.92411"	"1584.92489"	"-0.50"	"-0.00026"	"12/86"	"12"	"86"	"1992098.06408691"	"HCD"	"MS2"	"10.90299"	"45.6"	"100.000"	"87.8071"	"30675"	"30675"	"30650"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.1"	""	"80.3"	""	"31.5"	""	"84.4"	""	"83.3"	"65.1"	""	"650"	"54"	"35.000"	"28.000"	"0.000140566995086378"	""	"0"	"0.0001009"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7660"	"0.0000"	"1"	"1"	"1"	"792.96576"	"1584.92424"	"1584.92489"	"-0.41"	"-0.00033"	"9/86"	"9"	"86"	"6737637.77593994"	"HCD"	"MS2"	"0"	"352.9"	"100.000"	"88.4330"	"30890"	"30890"	"30875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"734.2"	""	"450.3"	""	"204.0"	""	"636.6"	""	"763.0"	"559.4"	""	"650"	"47"	"35.000"	"28.000"	"0.000620702309034028"	"26"	"0"	"3.164E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"792.96582"	"1584.92436"	"1584.92489"	"-0.33"	"-0.00027"	"9/86"	"9"	"86"	"10195870.6646118"	"HCD"	"MS2"	"0"	"536.2"	"100.000"	"88.1429"	"30773"	"30773"	"30760"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1193.8"	""	"753.5"	""	"289.0"	""	"997.7"	""	"1064.0"	"778.3"	""	"650"	"48"	"35.000"	"28.000"	"0.000498750519409771"	"26"	"0"	"2.878E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"792.96606"	"1584.92485"	"1584.92489"	"-0.03"	"-0.00002"	"6/86"	"6"	"86"	"757089.637084961"	"HCD"	"MS2"	"0"	"46.5"	"100.000"	"88.7326"	"31011"	"31011"	"30994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.1"	""	"66.6"	""	"29.1"	""	"79.6"	""	"90.8"	"79.2"	""	"656"	"40"	"35.000"	"28.000"	"0.00296397027380915"	"25"	"0"	"7.474E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"792.96619"	"1584.92510"	"1584.92489"	"0.13"	"0.00010"	"9/86"	"9"	"86"	"4648027.27374268"	"HCD"	"MS2"	"0"	"245.3"	"100.000"	"88.3924"	"30913"	"30913"	"30902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"501.8"	""	"318.1"	""	"161.3"	""	"426.0"	""	"523.8"	"394.8"	""	"653"	"50"	"35.000"	"28.000"	"0.000349046418066198"	""	"0"	"2.266E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7347"	"0.0000"	"1"	"1"	"1"	"528.97992"	"1584.92521"	"1584.92489"	"0.20"	"0.00010"	"12/86"	"12"	"86"	"1531431.79150391"	"HCD"	"MS2"	"11.38017"	"36.8"	"100.000"	"87.8980"	"30675"	"30675"	"30663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.8"	""	"55.3"	""	"29.6"	""	"65.3"	"1.0"	"70.8"	"51.0"	""	"655"	"49"	"35.000"	"28.000"	"0.000407578535355129"	""	"0"	"8.766E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"792.96625"	"1584.92522"	"1584.92489"	"0.20"	"0.00016"	"9/86"	"9"	"86"	"458078.097595215"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"88.6990"	"31037"	"31037"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.0"	""	"42.3"	""	"18.2"	""	"50.9"	""	"61.0"	"40.6"	""	"655"	"50"	"35.000"	"28.000"	"0.000323006531544221"	""	"0"	"1.313E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7358"	"0.0000"	"1"	"1"	"1"	"792.96637"	"1584.92546"	"1584.92489"	"0.36"	"0.00028"	"9/86"	"9"	"86"	"831703.00378418"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"87.8048"	"30674"	"30674"	"30650"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.3"	""	"81.4"	""	"25.4"	""	"99.5"	""	"99.9"	"68.1"	""	"656"	"53"	"35.000"	"28.000"	"0.00017983484449404"	""	"0"	"5.514E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"528.98010"	"1584.92575"	"1584.92489"	"0.54"	"0.00029"	"12/86"	"12"	"86"	"22172234.4498291"	"HCD"	"MS2"	"3.729158"	"188.5"	"43.421"	"88.1182"	"30801"	"30801"	"30783"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"381.7"	""	"277.0"	""	"119.3"	""	"353.9"	""	"376.6"	"278.2"	""	"654"	"54"	"35.000"	"28.000"	"0.000142740677142534"	""	"0"	"0.0001469"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"528.98029"	"1584.92630"	"1584.92489"	"0.89"	"0.00047"	"12/86"	"12"	"86"	"17331427.8098145"	"HCD"	"MS2"	"4.07516"	"191.8"	"55.584"	"88.1775"	"30787"	"30787"	"30772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"409.9"	""	"273.9"	""	"130.1"	""	"338.0"	"1.2"	"383.4"	"279.2"	""	"654"	"54"	"35.000"	"28.000"	"0.000134755888744827"	""	"0"	"5.151E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIPVDSPELK"	"[R].eIPVDSPELk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"792.96796"	"1584.92864"	"1584.92489"	"2.36"	"0.00187"	"7/86"	"7"	"86"	"426225.76965332"	"HCD"	"MS2"	"38.97994"	"27.1"	"100.000"	"87.8726"	"30665"	"30665"	"30647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.8"	""	"43.1"	""	"22.2"	""	"47.1"	""	"60.7"	"36.6"	""	"615"	"23"	"34.000"	"27.000"	"0.148198947769727"	"17"	"0.002286"	"0.02176"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQNLASYDYVR"	"[R].qQNLASYDYVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.41278"	"1585.81828"	"1585.81719"	"0.69"	"0.00055"	"7/104"	"7"	"104"	"260108.092041016"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"61.3278"	"19954"	"19954"	"19931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"37.1"	""	"34.9"	""	"26.7"	""	"37.5"	"34.6"	""	"747"	"13"	"35.000"	"28.000"	"1.94218504705268"	"13"	"0.0001991"	"0.004343"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQNLASYDYVR"	"[R].qQNLASYDYVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"793.41290"	"1585.81853"	"1585.81719"	"0.85"	"0.00067"	"7/104"	"7"	"104"	"268314.866149902"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"61.4014"	"19953"	"19953"	"19928"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"37.8"	""	"37.0"	""	"21.2"	""	"31.3"	"36.2"	""	"747"	"26"	"35.000"	"28.000"	"0.098014562595409"	"20"	"0.0001991"	"0.002065"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFPYEESK"	"[K].dLFPYEESk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"793.42828"	"1585.84929"	"1585.85140"	"-1.33"	"-0.00105"	"7/78"	"7"	"78"	"363796.899902344"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"95.9808"	"33938"	"33938"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	""	"37.6"	""	"35.2"	""	"63.4"	""	"71.9"	"74.7"	""	"866"	"26"	"36.000"	"29.000"	"0.112586909085056"	"22"	"0.001103"	"0.009113"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFPYEESK"	"[K].dLFPYEESk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"Q8VHK7"	"Hepatoma-derived growth factor OS=Rattus norvegicus OX=10116 GN=Hdgf PE=1 SV=2"	"0"	"2"	"2"	"0.4688"	"0.0000"	"1"	"1"	"1"	"793.42914"	"1585.85100"	"1585.85140"	"-0.25"	"-0.00020"	"14/78"	"14"	"78"	"511921.633056641"	"HCD"	"MS2"	"18.8577"	"44.5"	"100.000"	"96.0382"	"33993"	"33993"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"52.0"	""	"52.7"	""	"87.2"	""	"97.0"	"88.5"	""	"851"	"32"	"36.000"	"29.000"	"0.0254038514441423"	""	"0"	"0.0002554"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENPDTASLLGR"	"[R].aLENPDTASLLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.44171"	"1585.87615"	"1585.87470"	"0.91"	"0.00072"	"9/126"	"9"	"126"	"401396.525695801"	"HCD"	"MS2"	"7.607965"	"27.0"	"100.000"	"90.5505"	"31741"	"31741"	"31724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.1"	""	"44.9"	""	"42.7"	""	"38.8"	""	"46.1"	"46.0"	""	"860"	"35"	"36.000"	"29.000"	"0.0152569757370438"	"15"	"9.9E-05"	"0.000646"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALENPDTASLLGR"	"[R].aLENPDTASLLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"O88902"	"Tyrosine-protein phosphatase non-receptor type 23 (Fragment) OS=Rattus norvegicus OX=10116 GN=Ptpn23 PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"793.44226"	"1585.87724"	"1585.87470"	"1.60"	"0.00127"	"8/126"	"8"	"126"	"373146.221130371"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"90.4275"	"31730"	"31730"	"31712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"31.7"	""	"35.8"	""	"36.6"	""	"46.9"	"45.6"	""	"854"	"30"	"36.000"	"29.000"	"0.0395756334582982"	"15"	"0.0001991"	"0.002305"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.30231"	"1585.89237"	"1585.89499"	"-1.65"	"-0.00087"	"10/96"	"10"	"96"	"773386.089538574"	"HCD"	"MS2"	"9.950075"	"33.1"	"100.000"	"51.2558"	"15832"	"15832"	"15805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"39.0"	""	"51.8"	""	"52.6"	""	"49.7"	"69.9"	""	"880"	"29"	"36.000"	"29.000"	"0.0547586429179409"	"14"	"9.9E-05"	"0.0004722"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"529.30267"	"1585.89347"	"1585.89499"	"-0.96"	"-0.00051"	"12/96"	"12"	"96"	"2694926.85748291"	"HCD"	"MS2"	"37.18859"	"75.7"	"100.000"	"50.6587"	"15622"	"15622"	"15610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.4"	""	"111.0"	""	"121.2"	""	"119.4"	"2.1"	"123.3"	"110.8"	""	"872"	"45"	"36.000"	"29.000"	"0.00130162682184823"	"25"	"0"	"0.0001235"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"4"	"4"	"0.7059"	"0.0000"	"1"	"1"	"1"	"397.22888"	"1585.89370"	"1585.89499"	"-0.82"	"-0.00032"	"8/96"	"8"	"96"	"1070890.55993652"	"HCD"	"MS2"	"27.18146"	"51.0"	"100.000"	"50.2563"	"15459"	"15459"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.8"	""	"84.5"	""	"99.2"	""	"76.5"	""	"82.1"	"68.2"	""	"869"	"34"	"36.000"	"29.000"	"0.0182805720033041"	"24"	"9.9E-05"	"0.0004758"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"529.30280"	"1585.89383"	"1585.89499"	"-0.73"	"-0.00039"	"12/96"	"12"	"96"	"5610034.06451416"	"HCD"	"MS2"	"6.714174"	"138.3"	"100.000"	"49.9892"	"15350"	"15350"	"15323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"235.9"	""	"221.0"	""	"277.3"	""	"210.2"	""	"221.6"	"143.4"	""	"869"	"42"	"36.000"	"29.000"	"0.00265454309821471"	"26"	"0"	"8.084E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"529.30280"	"1585.89383"	"1585.89499"	"-0.73"	"-0.00039"	"13/96"	"13"	"96"	"18524123.3265381"	"HCD"	"MS2"	"4.216847"	"188.5"	"42.238"	"50.7406"	"15622"	"15622"	"15606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"321.5"	""	"323.9"	""	"356.3"	""	"263.1"	""	"319.7"	"194.2"	""	"869"	"63"	"36.000"	"29.000"	"2.21304263474351E-05"	""	"0"	"1.037E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"793.45087"	"1585.89446"	"1585.89499"	"-0.34"	"-0.00027"	"10/96"	"10"	"96"	"352198.535705566"	"HCD"	"MS2"	"100"	"27.8"	"100.000"	"50.1528"	"15417"	"15417"	"15387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"44.4"	""	"48.0"	""	"40.2"	"1.6"	"48.2"	"29.5"	""	"864"	"49"	"36.000"	"29.000"	"0.000596326002308446"	"28"	"0"	"4.741E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"529.30316"	"1585.89493"	"1585.89499"	"-0.04"	"-0.00002"	"9/96"	"9"	"96"	"34389729.4007568"	"HCD"	"MS2"	"4.100849"	"225.1"	"29.957"	"50.3002"	"15477"	"15477"	"15463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"388.5"	""	"370.6"	""	"466.3"	""	"315.8"	""	"357.6"	"231.8"	""	"883"	"66"	"36.000"	"29.000"	"1.12961566906884E-05"	""	"0"	"1.024E-06"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"793.45111"	"1585.89495"	"1585.89499"	"-0.03"	"-0.00002"	"7/96"	"7"	"96"	"155891.144714355"	"HCD"	"MS2"	"45.0266"	"12.8"	"100.000"	"50.5185"	"15566"	"15566"	"15539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"19.9"	""	"17.0"	""	"23.6"	""	"25.1"	"18.6"	""	"883"	"7"	"36.000"	"29.000"	"9.22424241772058"	"13"	"0.004114"	"0.04474"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"529.30328"	"1585.89530"	"1585.89499"	"0.19"	"0.00010"	"13/96"	"13"	"96"	"15964198.1994019"	"HCD"	"MS2"	"4.894406"	"371.4"	"100.000"	"50.4302"	"15495"	"15495"	"15478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"669.7"	""	"615.3"	""	"717.9"	""	"533.4"	""	"604.6"	"373.5"	""	"863"	"60"	"36.000"	"29.000"	"4.27543984221229E-05"	""	"0"	"1.052E-06"	"1.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLLGVSDSGK"	"[R].dHLLGVSDSGk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"793.45129"	"1585.89531"	"1585.89499"	"0.20"	"0.00016"	"10/96"	"10"	"96"	"415278.493652344"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"50.5198"	"15531"	"15531"	"15510"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.8"	""	"56.4"	""	"60.0"	""	"50.5"	""	"50.1"	"33.9"	""	"863"	"51"	"36.000"	"29.000"	"0.00035561559662811"	""	"0"	"8.759E-06"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEQPELASK"	"[K].lIEQPELASk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"Q920D2"	"Dihydrofolate reductase OS=Rattus norvegicus OX=10116 GN=Dhfr PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"793.48291"	"1585.95854"	"1585.95653"	"1.27"	"0.00101"	"10/96"	"10"	"96"	"159740.30279541"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"90.0976"	"31598"	"31598"	"31577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"14.7"	""	"18.5"	""	"22.9"	""	"27.6"	"30.5"	""	"586"	"24"	"34.000"	"27.000"	"0.112167649791829"	"19"	"0.0009352"	"0.008117"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVMGDFAQFVDk.[C]"	"K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"793.90735"	"1586.80742"	"1586.80860"	"-0.74"	"-0.00059"	"6/116"	"6"	"116"	"162513.280944824"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"111.9037"	"40295"	"40295"	"40268"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.9"	""	"18.4"	""	"14.2"	""	"10.3"	""	"19.7"	"13.8"	""	"737"	"33"	"35.000"	"28.000"	"0.0205796266760522"	"23"	"0.001261"	"0.01017"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVMGDFAQFVDk.[C]"	"K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"793.90839"	"1586.80950"	"1586.80860"	"0.57"	"0.00045"	"6/116"	"6"	"116"	"266699.01373291"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"111.8135"	"40245"	"40245"	"40215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.5"	""	"29.6"	""	"22.6"	""	"16.2"	"1.0"	"28.0"	"31.3"	""	"744"	"34"	"35.000"	"28.000"	"0.0147755256402632"	"18"	"0.001615"	"0.01341"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"529.63275"	"1586.88370"	"1586.88118"	"1.59"	"0.00084"	"9/118"	"9"	"118"	"3391702.72320557"	"HCD"	"MS2"	"7.291546"	"94.5"	"100.000"	"51.7586"	"16065"	"16065"	"16045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"192.6"	""	"107.1"	""	"135.2"	""	"151.8"	"6.4"	"149.9"	"149.7"	""	"959"	"37"	"36.000"	"29.000"	"0.00920001661151403"	"19"	"0"	"3.275E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"529.63342"	"1586.88572"	"1586.88118"	"2.86"	"0.00151"	"7/118"	"7"	"118"	"4117389.10577393"	"HCD"	"MS2"	"10.36025"	"106.5"	"100.000"	"52.0212"	"16138"	"16138"	"16116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"236.8"	""	"119.7"	""	"145.0"	""	"166.0"	"3.5"	"165.6"	"168.8"	""	"931"	"20"	"36.000"	"29.000"	"0.439460337911098"	"15"	"0"	"0.0003645"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"529.63617"	"1586.89396"	"1586.89510"	"-0.72"	"-0.00038"	"14/112"	"14"	"112"	"725896.046081543"	"HCD"	"MS2"	"16.1079"	"11.5"	"100.000"	"94.4270"	"33307"	"33307"	"33287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"14.3"	""	"18.5"	""	"21.4"	""	"22.1"	"20.1"	""	"949"	"52"	"36.000"	"29.000"	"0.000271791716702776"	"26"	"0"	"4.509E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.7313"	"0.0000"	"1"	"1"	"1"	"529.63623"	"1586.89414"	"1586.89510"	"-0.61"	"-0.00032"	"14/112"	"14"	"112"	"1858334.18548584"	"HCD"	"MS2"	"53.57734"	"17.3"	"100.000"	"94.1245"	"33184"	"33184"	"33163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"23.0"	""	"25.2"	""	"28.7"	"1.3"	"32.2"	"31.7"	""	"948"	"67"	"36.000"	"29.000"	"1.0514251029853E-05"	""	"0"	"7.086E-07"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"793.95074"	"1586.89421"	"1586.89510"	"-0.56"	"-0.00044"	"8/112"	"8"	"112"	"224624.20300293"	"HCD"	"MS2"	"24.93715"	"10.3"	"100.000"	"93.8516"	"33109"	"33109"	"33078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"13.3"	""	"10.1"	""	"18.1"	""	"23.0"	"17.1"	""	"948"	"28"	"36.000"	"29.000"	"0.0837101927005242"	"26"	"0.0001991"	"0.001997"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"529.63629"	"1586.89432"	"1586.89510"	"-0.49"	"-0.00026"	"14/112"	"14"	"112"	"625592.151184082"	"HCD"	"MS2"	"11.7989"	"11.1"	"100.000"	"94.3965"	"33330"	"33330"	"33310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"13.3"	""	"12.2"	""	"16.6"	""	"20.9"	"26.0"	""	"948"	"53"	"36.000"	"29.000"	"0.00026289258794205"	"26"	"0"	"2.864E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"793.95111"	"1586.89495"	"1586.89510"	"-0.10"	"-0.00008"	"6/112"	"6"	"112"	"226637.030273438"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"93.9375"	"33108"	"33108"	"33083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"12.6"	""	"14.9"	""	"21.5"	""	"21.7"	"20.5"	""	"954"	"27"	"36.000"	"29.000"	"0.085019467207274"	"24"	"0.0001991"	"0.002924"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"793.95111"	"1586.89495"	"1586.89510"	"-0.10"	"-0.00008"	"12/112"	"12"	"112"	"1654137.22235107"	"HCD"	"MS2"	"1.570339"	"57.0"	"100.000"	"94.2309"	"33228"	"33228"	"33211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.4"	""	"63.7"	""	"74.0"	""	"104.9"	""	"117.1"	"109.4"	""	"954"	"65"	"36.000"	"29.000"	"1.44383770520432E-05"	"29"	"0"	"1.523E-07"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"2"	"2"	"0.8209"	"0.0000"	"1"	"1"	"1"	"793.95123"	"1586.89519"	"1586.89510"	"0.05"	"0.00004"	"9/112"	"9"	"112"	"1669425.04705811"	"HCD"	"MS2"	"0"	"55.3"	"100.000"	"94.1564"	"33233"	"33233"	"33220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.8"	""	"75.5"	""	"63.2"	""	"105.7"	""	"104.2"	"102.2"	""	"942"	"67"	"36.000"	"29.000"	"9.84058477632253E-06"	"29"	"0"	"5.625E-08"	"1.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIDPATATSVDLR"	"[K].vIDPATATSVDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.8194"	"0.0000"	"1"	"1"	"1"	"529.63660"	"1586.89524"	"1586.89510"	"0.08"	"0.00004"	"14/112"	"14"	"112"	"1764586.76745605"	"HCD"	"MS2"	"48.36352"	"15.6"	"100.000"	"94.0548"	"33191"	"33191"	"33174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"15.9"	""	"26.2"	""	"24.4"	""	"36.8"	"28.1"	""	"941"	"72"	"36.000"	"29.000"	"2.68880698554113E-06"	""	"0"	"1.46E-06"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSVEADINGLRR"	"[R].qSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"2"	"Q6IFW6"	"Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"Q6IFV4; Q6IFW6"	"Keratin, type I cytoskeletal 13 OS=Rattus norvegicus OX=10116 GN=Krt13 PE=3 SV=1; Keratin, type I cytoskeletal 10 OS=Rattus norvegicus OX=10116 GN=Krt10 PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.63733"	"1586.89743"	"1586.88118"	"10.24"	"0.00542"	"12/118"	"12"	"118"	"1742450.4163208"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"51.4680"	"15948"	"15948"	"15923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.6"	""	"73.6"	""	"89.5"	""	"90.1"	"1.7"	"94.9"	"100.2"	""	"907"	"12"	"36.000"	"29.000"	"2.69511493932162"	"13"	"0.002328"	"0.02197"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.8438"	"0.0000"	"1"	"1"	"1"	"794.40753"	"1587.80779"	"1587.80888"	"-0.69"	"-0.00055"	"9/100"	"9"	"100"	"652389.514526367"	"HCD"	"MS2"	"0"	"62.3"	"100.000"	"53.4397"	"16751"	"16751"	"16728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.9"	""	"47.7"	""	"72.8"	""	"76.3"	"0.5"	"156.5"	"150.5"	""	"792"	"64"	"35.000"	"28.000"	"1.53707544932297E-05"	"26"	"0"	"6.558E-07"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"794.40778"	"1587.80828"	"1587.80888"	"-0.38"	"-0.00030"	"8/100"	"8"	"100"	"643410.989318848"	"HCD"	"MS2"	"3.648156"	"63.6"	"100.000"	"53.8032"	"16866"	"16866"	"16841"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.6"	""	"60.5"	""	"64.7"	""	"85.9"	"1.5"	"146.4"	"150.7"	""	"786"	"51"	"35.000"	"28.000"	"0.000285359641272016"	"27"	"0"	"1.409E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94281"	"1587.81388"	"1587.81508"	"-0.76"	"-0.00040"	"8/96"	"8"	"96"	"5137451.22137451"	"HCD"	"MS2"	"20.64829"	"70.3"	"100.000"	"53.1682"	"16606"	"16606"	"16586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.8"	""	"82.4"	""	"83.5"	""	"157.0"	"0.6"	"136.2"	"130.7"	""	"821"	"38"	"36.000"	"29.000"	"0.00729983697820977"	"15"	"0"	"2.379E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94287"	"1587.81406"	"1587.81508"	"-0.64"	"-0.00034"	"8/96"	"8"	"96"	"5950535.79284668"	"HCD"	"MS2"	"9.778621"	"67.7"	"100.000"	"53.1315"	"16626"	"16626"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.0"	""	"66.7"	""	"86.3"	""	"145.7"	""	"132.9"	"129.5"	""	"822"	"36"	"36.000"	"29.000"	"0.0099275440295687"	"15"	"0"	"0.000122"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94293"	"1587.81424"	"1587.81508"	"-0.53"	"-0.00028"	"7/96"	"7"	"96"	"5170454.58184814"	"HCD"	"MS2"	"18.60546"	"68.4"	"100.000"	"52.8301"	"16502"	"16502"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.4"	""	"73.6"	""	"88.0"	""	"145.7"	""	"126.8"	"129.8"	""	"823"	"34"	"36.000"	"29.000"	"0.0169188110234511"	"15"	"0"	"4.417E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"529.94312"	"1587.81479"	"1587.81508"	"-0.18"	"-0.00010"	"5/96"	"5"	"96"	"568776.894470215"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"66.2058"	"21935"	"21935"	"21910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"25.2"	""	"29.6"	""	"38.4"	""	"37.9"	"34.5"	""	"825"	"19"	"36.000"	"29.000"	"0.466040814802529"	"17"	"9.9E-05"	"0.000936"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"529.94312"	"1587.81479"	"1587.81508"	"-0.18"	"-0.00010"	"9/96"	"9"	"96"	"564700.074890137"	"HCD"	"MS2"	"54.31984"	"21.2"	"100.000"	"66.1449"	"21877"	"21877"	"21849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"28.6"	""	"25.3"	""	"36.5"	""	"42.3"	"42.8"	""	"825"	"20"	"36.000"	"29.000"	"0.396665064833261"	"19"	"0.0001991"	"0.002887"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94312"	"1587.81479"	"1587.81508"	"-0.18"	"-0.00010"	"7/96"	"7"	"96"	"5828704.97723389"	"HCD"	"MS2"	"5.422336"	"63.6"	"100.000"	"53.4741"	"16731"	"16731"	"16714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.7"	""	"77.9"	""	"89.2"	""	"136.6"	""	"119.0"	"104.2"	""	"825"	"38"	"36.000"	"29.000"	"0.00673633928506413"	"15"	"0"	"3.87E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.1333"	"0.0000"	"1"	"1"	"1"	"794.41107"	"1587.81487"	"1587.80888"	"3.77"	"0.00299"	"10/100"	"10"	"100"	"256434.474975586"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"53.4995"	"16742"	"16742"	"16714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"26.9"	""	"23.3"	""	"33.7"	""	"47.8"	"43.2"	""	"825"	"15"	"36.000"	"29.000"	"1.20067081120247"	"27"	"0.001348"	"0.01124"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94330"	"1587.81534"	"1587.81508"	"0.17"	"0.00009"	"12/96"	"12"	"96"	"744632.645507813"	"HCD"	"MS2"	"45.77416"	"30.9"	"100.000"	"67.5612"	"22480"	"22480"	"22457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.4"	""	"40.3"	""	"42.8"	""	"44.4"	"0.6"	"62.1"	"58.5"	""	"825"	"8"	"36.000"	"29.000"	"6.73633928506412"	"13"	"0.0005778"	"0.007143"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94348"	"1587.81589"	"1587.81508"	"0.51"	"0.00027"	"9/96"	"9"	"96"	"621338.252746582"	"HCD"	"MS2"	"22.93988"	"24.0"	"100.000"	"67.8365"	"22560"	"22560"	"22536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"30.4"	""	"36.6"	""	"31.1"	""	"46.1"	"46.0"	""	"843"	"26"	"36.000"	"29.000"	"0.0985819896094918"	"14"	"0.0001686"	"0.001214"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIEQDFPGMR"	"[R].hLIEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"529.94354"	"1587.81607"	"1587.81508"	"0.63"	"0.00033"	"5/96"	"5"	"96"	"668826.925537109"	"HCD"	"MS2"	"56.23755"	"19.1"	"100.000"	"67.0061"	"22255"	"22255"	"22235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.8"	""	"24.9"	""	"30.0"	""	"32.1"	""	"36.4"	"27.8"	""	"843"	"17"	"36.000"	"29.000"	"0.85466826627822"	"14"	"0.0001991"	"0.002482"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAMQYASESK"	"[K].dAMQYASESk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.5238"	"0.0000"	"1"	"1"	"1"	"794.41321"	"1587.81914"	"1587.80888"	"6.46"	"0.00513"	"11/100"	"11"	"100"	"251473.44519043"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"53.1244"	"16623"	"16623"	"16593"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"24.0"	""	"26.9"	""	"38.8"	""	"43.6"	"39.2"	""	"846"	"21"	"36.000"	"29.000"	"0.333687829752648"	"24"	"0.001049"	"0.00861"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"529.95184"	"1587.84098"	"1587.84189"	"-0.58"	"-0.00031"	"9/96"	"9"	"96"	"1681235.73742676"	"HCD"	"MS2"	"8.089444"	"48.9"	"100.000"	"81.8740"	"28254"	"28254"	"28231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.5"	""	"63.9"	""	"69.8"	""	"73.4"	""	"83.5"	"81.0"	""	"1001"	"29"	"36.000"	"30.000"	"0.0592112298640445"	"23"	"0.0001991"	"0.003673"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"529.95203"	"1587.84153"	"1587.84189"	"-0.23"	"-0.00012"	"9/96"	"9"	"96"	"1598711.57818604"	"HCD"	"MS2"	"16.66722"	"50.5"	"100.000"	"81.9105"	"28297"	"28297"	"28275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.8"	""	"66.0"	""	"67.5"	""	"81.6"	""	"83.7"	"89.3"	""	"999"	"27"	"36.000"	"29.000"	"0.109783100645602"	"19"	"0.0001686"	"0.00113"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"794.42450"	"1587.84172"	"1587.84189"	"-0.11"	"-0.00009"	"12/96"	"12"	"96"	"268528.112915039"	"HCD"	"MS2"	"4.271127"	"25.0"	"100.000"	"82.4464"	"28511"	"28511"	"28490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"28.3"	""	"34.0"	""	"38.5"	""	"47.7"	"47.3"	""	"997"	"42"	"36.000"	"29.000"	"0.003189078154881"	"19"	"0"	"0.0001146"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"794.42456"	"1587.84184"	"1587.84189"	"-0.03"	"-0.00002"	"8/96"	"8"	"96"	"1351973.11578369"	"HCD"	"MS2"	"0"	"119.6"	"100.000"	"82.1251"	"28384"	"28384"	"28366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"234.6"	""	"150.5"	""	"155.4"	""	"169.9"	"0.4"	"207.3"	"213.3"	""	"993"	"45"	"36.000"	"29.000"	"0.00161777922047497"	"22"	"0"	"2.569E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"529.95215"	"1587.84189"	"1587.84189"	"0.00"	"0.00000"	"8/96"	"8"	"96"	"3514633.70135498"	"HCD"	"MS2"	"14.28769"	"78.7"	"100.000"	"82.2012"	"28415"	"28415"	"28398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.7"	""	"102.1"	""	"81.5"	""	"138.2"	"0.4"	"152.5"	"131.9"	""	"993"	"11"	"36.000"	"29.000"	"3.69759425044323"	"19"	"0.004819"	"0.05694"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"794.42462"	"1587.84197"	"1587.84189"	"0.05"	"0.00004"	"8/96"	"8"	"96"	"345305.795471191"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"82.3605"	"28452"	"28452"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.6"	""	"40.7"	""	"40.4"	""	"49.7"	""	"63.9"	"57.6"	""	"993"	"50"	"36.000"	"29.000"	"0.000468726225075961"	"29"	"0"	"1.2E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"794.42468"	"1587.84209"	"1587.84189"	"0.12"	"0.00010"	"7/96"	"7"	"96"	"547267.317871094"	"HCD"	"MS2"	"7.733764"	"57.1"	"100.000"	"81.8321"	"28265"	"28265"	"28243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.1"	""	"77.3"	""	"84.0"	""	"95.9"	"0.0"	"90.8"	"92.5"	""	"991"	"50"	"36.000"	"29.000"	"0.000452943111148509"	"24"	"0"	"1.842E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"794.42468"	"1587.84209"	"1587.84189"	"0.12"	"0.00010"	"7/96"	"7"	"96"	"1327449.24578857"	"HCD"	"MS2"	"0"	"115.7"	"100.000"	"82.0584"	"28329"	"28329"	"28311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.7"	""	"144.0"	""	"143.9"	""	"180.9"	""	"197.1"	"203.0"	""	"991"	"51"	"36.000"	"29.000"	"0.000439585803964809"	"23"	"0"	"2.207E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDNFLYTNGK"	"[K].gDNFLYTnGk.[C]"	"N-Term(TMT6plex); N8(Deamidated); K10(TMT6plex)"	"1"	"1"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"Q5RKI0"	"WD repeat-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Wdr1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"794.42474"	"1587.84221"	"1587.84189"	"0.20"	"0.00016"	"8/96"	"8"	"96"	"489421.839233398"	"HCD"	"MS2"	"6.017041"	"49.0"	"100.000"	"81.7609"	"28208"	"28208"	"28187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.2"	""	"67.6"	""	"61.8"	""	"78.7"	"0.4"	"83.0"	"76.1"	""	"989"	"48"	"36.000"	"29.000"	"0.000751910753452719"	"23"	"0"	"2.17E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.42993"	"1587.85259"	"1587.85397"	"-0.87"	"-0.00069"	"5/116"	"5"	"116"	"95020.6581420898"	"HCD"	"MS2"	"8.892151"	"6.8"	"100.000"	"102.0700"	"36404"	"36404"	"36385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"8.0"	""	"8.5"	""	"11.9"	""	"11.2"	"14.6"	""	"1020"	"16"	"37.000"	"30.000"	"1.17915304298955"	"14"	"0.001217"	"0.009372"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.42993"	"1587.85259"	"1587.85397"	"-0.87"	"-0.00069"	"5/116"	"5"	"116"	"138375.608398438"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"101.9456"	"36378"	"36378"	"36355"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"14.6"	""	"14.7"	""	"15.9"	""	"12.3"	"24.7"	""	"1020"	"9"	"37.000"	"30.000"	"7.05618853275608"	"13"	"0.004998"	"0.06379"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.5577"	"0.0000"	"1"	"1"	"1"	"529.95593"	"1587.85324"	"1587.85397"	"-0.45"	"-0.00024"	"12/116"	"12"	"116"	"811396.305297852"	"HCD"	"MS2"	"18.60475"	"9.7"	"100.000"	"102.1418"	"36457"	"36457"	"36443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"12.1"	""	"9.9"	""	"15.8"	""	"24.2"	"17.4"	""	"1027"	"52"	"37.000"	"30.000"	"0.000302371217025095"	""	"0"	"1.642E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.5106"	"0.0000"	"1"	"1"	"1"	"529.95593"	"1587.85324"	"1587.85397"	"-0.45"	"-0.00024"	"13/116"	"13"	"116"	"705320.043518066"	"HCD"	"MS2"	"14.27254"	"9.7"	"100.000"	"102.0054"	"36378"	"36378"	"36355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"16.7"	""	"9.3"	""	"16.3"	""	"18.1"	"18.9"	""	"1027"	"47"	"37.000"	"30.000"	"0.000930123137560165"	""	"0"	"7.129E-06"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"794.43066"	"1587.85405"	"1587.85397"	"0.05"	"0.00004"	"7/116"	"7"	"116"	"187435.68951416"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"101.7795"	"36286"	"36286"	"36264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"16.9"	""	"16.6"	""	"20.0"	""	"21.4"	"24.4"	""	"1036"	"21"	"37.000"	"30.000"	"0.449086251642756"	"17"	"0"	"0.000326"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATLEAAIADAEQR"	"[R].aTLEAAIADAEQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"794.43109"	"1587.85491"	"1587.85397"	"0.59"	"0.00047"	"6/116"	"6"	"116"	"110351.974975586"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"102.2435"	"36498"	"36498"	"36475"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.9"	""	"7.5"	""	"9.6"	""	"14.5"	""	"14.7"	"17.9"	""	"1011"	"39"	"37.000"	"30.000"	"0.00643755807453922"	"21"	"0"	"0.0001399"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQSSLSSTEK"	"[K].yQSSLSSTEk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.43549"	"1587.86370"	"1587.86302"	"0.42"	"0.00034"	"11/100"	"11"	"100"	"188862.615478516"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"45.0384"	"13342"	"13342"	"13315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"28.9"	""	"22.5"	""	"24.3"	""	"34.0"	"42.8"	""	"1064"	"32"	"37.000"	"30.000"	"0.0345868995262524"	"14"	"0.001261"	"0.009827"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEAEQIALK"	"[R].lDEAEQIALk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	""	""	"P02564; P02563"	"Myosin-7 OS=Rattus norvegicus OX=10116 GN=Myh7 PE=1 SV=2; Myosin-6 OS=Rattus norvegicus OX=10116 GN=Myh6 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"794.47070"	"1587.93413"	"1587.93579"	"-1.05"	"-0.00083"	"6/86"	"6"	"86"	"122846.048095703"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"105.0057"	"37598"	"37598"	"37579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.3"	""	"2.5"	""	"5.7"	""	"8.0"	""	"7.4"	"63.8"	""	"783"	"24"	"35.000"	"28.000"	"0.140517937413519"	"22"	"0.002189"	"0.02057"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEAEQLALK"	"[R].lDEAEQLALk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"3"	"P12847"	"Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"P04462; Q29RW1; P12847"	"Myosin-8 (Fragment) OS=Rattus norvegicus OX=10116 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Rattus norvegicus OX=10116 GN=Myh4 PE=1 SV=1; Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"794.47070"	"1587.93413"	"1587.93579"	"-1.05"	"-0.00083"	"6/86"	"6"	"86"	"122846.048095703"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"105.0057"	"37598"	"37598"	"37579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.3"	""	"2.5"	""	"5.7"	""	"8.0"	""	"7.4"	"63.8"	""	"783"	"24"	"35.000"	"28.000"	"0.140517937413519"	"22"	"0.002189"	"0.02057"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEAEQIALK"	"[R].lDEAEQIALk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	""	""	"P02564; P02563"	"Myosin-7 OS=Rattus norvegicus OX=10116 GN=Myh7 PE=1 SV=2; Myosin-6 OS=Rattus norvegicus OX=10116 GN=Myh6 PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"794.47125"	"1587.93523"	"1587.93579"	"-0.36"	"-0.00028"	"7/86"	"7"	"86"	"106614.311523438"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"104.7055"	"37460"	"37460"	"37449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.4"	""	"1.8"	""	"5.1"	""	"5.0"	""	"5.8"	"63.6"	""	"774"	"20"	"35.000"	"28.000"	"0.399678664029661"	"16"	"0.003357"	"0.03799"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEAEQLALK"	"[R].lDEAEQLALk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"3"	"P12847"	"Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"P04462; Q29RW1; P12847"	"Myosin-8 (Fragment) OS=Rattus norvegicus OX=10116 GN=Myh8 PE=2 SV=1; Myosin-4 OS=Rattus norvegicus OX=10116 GN=Myh4 PE=1 SV=1; Myosin-3 OS=Rattus norvegicus OX=10116 GN=Myh3 PE=3 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"794.47125"	"1587.93523"	"1587.93579"	"-0.36"	"-0.00028"	"7/86"	"7"	"86"	"106614.311523438"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"104.7055"	"37460"	"37460"	"37449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.4"	""	"1.8"	""	"5.1"	""	"5.0"	""	"5.8"	"63.6"	""	"774"	"20"	"35.000"	"28.000"	"0.399678664029661"	"16"	"0.003357"	"0.03799"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"794.89362"	"1588.77995"	"1588.78047"	"-0.32"	"-0.00026"	"10/120"	"10"	"120"	"538700.526428223"	"HCD"	"MS2"	"5.38375"	"36.1"	"100.000"	"80.3798"	"27648"	"27648"	"27634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.2"	""	"42.3"	""	"49.8"	""	"61.7"	"1.2"	"67.5"	"65.6"	""	"637"	"63"	"35.000"	"28.000"	"1.51046072305388E-05"	"21"	"0"	"3.448E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.89374"	"1588.78020"	"1588.78047"	"-0.17"	"-0.00013"	"12/120"	"12"	"120"	"375547.389465332"	"HCD"	"MS2"	"18.06179"	"28.3"	"100.000"	"80.7623"	"27831"	"27831"	"27811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.6"	""	"33.3"	""	"37.5"	""	"49.6"	""	"49.9"	"56.0"	""	"630"	"36"	"34.000"	"27.000"	"0.00881679115684823"	"15"	"0"	"0.0002038"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"794.89374"	"1588.78020"	"1588.78047"	"-0.17"	"-0.00013"	"8/120"	"8"	"120"	"504135.500366211"	"HCD"	"MS2"	"8.245659"	"31.3"	"100.000"	"80.4555"	"27706"	"27706"	"27684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"27.9"	""	"42.7"	""	"49.4"	"2.3"	"61.2"	"66.3"	""	"630"	"37"	"34.000"	"27.000"	"0.00602990616381642"	"15"	"0"	"8.415E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAENYFDSTGR"	"[K].sLAENYFDSTGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"2"	"2"	"0.8810"	"0.0000"	"1"	"1"	"1"	"794.89404"	"1588.78081"	"1588.78047"	"0.22"	"0.00017"	"10/120"	"10"	"120"	"388631.89453125"	"HCD"	"MS2"	"11.75134"	"26.7"	"100.000"	"80.6794"	"27770"	"27770"	"27752"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"24.0"	""	"29.8"	""	"52.2"	""	"48.9"	"51.7"	""	"627"	"42"	"34.000"	"27.000"	"0.00210492945392286"	"20"	"0"	"5.951E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7971"	"0.0000"	"1"	"1"	"1"	"794.92737"	"1588.84746"	"1588.84921"	"-1.10"	"-0.00088"	"12/148"	"12"	"148"	"370704.629699707"	"HCD"	"MS2"	"100"	"20.3"	"100.000"	"33.5517"	"8650"	"8650"	"8620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"18.5"	""	"9.8"	""	"45.1"	""	"53.4"	"58.1"	""	"1012"	"69"	"37.000"	"30.000"	"6.81005339152311E-06"	""	"0"	"3.778E-07"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7826"	"0.0000"	"1"	"1"	"1"	"794.92798"	"1588.84868"	"1588.84921"	"-0.34"	"-0.00027"	"16/148"	"16"	"148"	"211345.169189453"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"33.8803"	"8784"	"8784"	"8755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"11.4"	""	"6.0"	""	"24.0"	""	"30.6"	"43.7"	""	"1007"	"46"	"37.000"	"30.000"	"0.00125892388961415"	"26"	"0"	"6.008E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"794.92804"	"1588.84880"	"1588.84921"	"-0.26"	"-0.00021"	"9/148"	"9"	"148"	"294762.092224121"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"33.7605"	"8773"	"8773"	"8745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"16.8"	""	"8.3"	""	"24.7"	""	"45.3"	"55.5"	""	"1025"	"60"	"37.000"	"30.000"	"5.23231485400187E-05"	"26"	"0"	"3.595E-07"	"1.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQASSTPLSPTR"	"[R].sGAQASSTPLSPTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"794.92853"	"1588.84978"	"1588.84921"	"0.36"	"0.00028"	"10/148"	"10"	"148"	"308585.799926758"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"33.4159"	"8632"	"8632"	"8607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.3"	""	"10.9"	""	"7.5"	""	"32.3"	"1.0"	"42.2"	"45.8"	""	"1013"	"76"	"37.000"	"30.000"	"1.18462106138096E-06"	""	"0"	"1.947E-07"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"530.29187"	"1588.86106"	"1588.86229"	"-0.78"	"-0.00041"	"8/86"	"8"	"86"	"2494005.37121582"	"HCD"	"MS2"	"16.9697"	"70.3"	"100.000"	"96.1725"	"34015"	"34015"	"33997"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"150.6"	""	"90.6"	""	"45.9"	""	"124.5"	""	"145.1"	"113.3"	""	"1040"	"42"	"37.000"	"30.000"	"0.00308321168781599"	"27"	"0"	"0.0001105"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"530.29187"	"1588.86106"	"1588.86229"	"-0.78"	"-0.00041"	"12/86"	"12"	"86"	"3608850.80438232"	"HCD"	"MS2"	"7.781165"	"98.1"	"100.000"	"96.2714"	"34087"	"34087"	"34073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.5"	""	"127.2"	""	"57.2"	""	"178.2"	""	"200.1"	"152.7"	""	"1040"	"30"	"37.000"	"30.000"	"0.0575444367668386"	"27"	"9.9E-05"	"0.000527"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"794.93445"	"1588.86162"	"1588.86229"	"-0.42"	"-0.00034"	"9/86"	"9"	"86"	"1690851.67126465"	"HCD"	"MS2"	"2.150734"	"157.2"	"100.000"	"96.2414"	"34075"	"34075"	"34057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"367.5"	""	"201.5"	""	"84.7"	""	"284.2"	""	"336.5"	"222.4"	""	"1057"	"51"	"37.000"	"30.000"	"0.000432558640529237"	"28"	"0"	"1.24E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7193"	"0.0000"	"1"	"1"	"1"	"794.93451"	"1588.86174"	"1588.86229"	"-0.35"	"-0.00028"	"16/86"	"16"	"86"	"1189685.81671143"	"HCD"	"MS2"	"0"	"117.4"	"100.000"	"96.4703"	"34136"	"34136"	"34121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"249.7"	""	"148.0"	""	"72.4"	""	"214.0"	"2.4"	"245.4"	"180.7"	""	"1057"	"57"	"37.000"	"30.000"	"0.000114827257302949"	""	"0"	"2.384E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"530.29218"	"1588.86197"	"1588.86229"	"-0.20"	"-0.00011"	"5/86"	"5"	"86"	"1689161.36047363"	"HCD"	"MS2"	"7.032762"	"49.0"	"100.000"	"96.5049"	"34150"	"34150"	"34135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.4"	""	"61.1"	""	"26.8"	""	"88.8"	""	"110.4"	"81.1"	""	"1053"	"30"	"37.000"	"30.000"	"0.0570687520232164"	"30"	"9.9E-05"	"0.0004996"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"794.93469"	"1588.86211"	"1588.86229"	"-0.12"	"-0.00009"	"7/86"	"7"	"86"	"1617000.77770996"	"HCD"	"MS2"	"1.047729"	"145.1"	"100.000"	"96.1890"	"34022"	"34022"	"34013"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.1"	""	"182.6"	""	"79.0"	""	"283.8"	""	"295.3"	"199.7"	""	"1051"	"52"	"37.000"	"30.000"	"0.000322531933714099"	""	"0"	"1.117E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"530.29254"	"1588.86307"	"1588.86229"	"0.49"	"0.00026"	"6/86"	"6"	"86"	"1745064.32550049"	"HCD"	"MS2"	"5.129969"	"50.3"	"100.000"	"96.5580"	"34203"	"34203"	"34188"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.3"	""	"69.1"	""	"36.8"	""	"83.0"	""	"111.4"	"78.7"	""	"1066"	"31"	"37.000"	"30.000"	"0.0428279423124934"	"28"	"9.9E-05"	"0.0004565"	"0.518"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGAETLYSFK"	"[K].dGAETLYSFk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"2"	"2"	"0.6327"	"0.0000"	"1"	"1"	"1"	"794.93524"	"1588.86321"	"1588.86229"	"0.57"	"0.00046"	"7/86"	"7"	"86"	"1235713.9621582"	"HCD"	"MS2"	"0"	"115.6"	"100.000"	"96.5234"	"34189"	"34189"	"34175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"255.2"	""	"157.5"	""	"56.0"	""	"202.3"	"1.5"	"251.4"	"171.0"	""	"1056"	"49"	"37.000"	"30.000"	"0.000657103715015292"	""	"0"	"1.767E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"530.31470"	"1588.92954"	"1588.93104"	"-0.95"	"-0.00050"	"8/92"	"8"	"92"	"2054720.45874023"	"HCD"	"MS2"	"19.02404"	"55.7"	"100.000"	"75.7645"	"25777"	"25777"	"25759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.9"	""	"61.7"	""	"79.5"	""	"86.9"	"1.4"	"108.6"	"111.2"	""	"878"	"39"	"36.000"	"29.000"	"0.00584069489492382"	"25"	"0"	"0.0001599"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"530.31500"	"1588.93045"	"1588.93104"	"-0.37"	"-0.00020"	"13/92"	"13"	"92"	"1466737.8137207"	"HCD"	"MS2"	"33.95765"	"42.4"	"100.000"	"75.8742"	"25853"	"25853"	"25836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.1"	""	"55.9"	""	"57.9"	""	"69.9"	""	"88.2"	"75.4"	""	"872"	"32"	"36.000"	"29.000"	"0.0273203644997138"	"23"	"0"	"9.971E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6170"	"0.0000"	"1"	"1"	"1"	"794.96899"	"1588.93071"	"1588.93104"	"-0.21"	"-0.00017"	"9/92"	"9"	"92"	"604239.898864746"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"75.9213"	"25841"	"25841"	"25817"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.4"	""	"52.7"	""	"69.9"	""	"84.1"	""	"83.8"	"95.7"	""	"886"	"47"	"36.000"	"29.000"	"0.000971412586360248"	""	"0"	"4.193E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"794.96912"	"1588.93096"	"1588.93104"	"-0.05"	"-0.00004"	"11/92"	"11"	"92"	"177009.528686523"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"76.2657"	"26013"	"26013"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"17.6"	""	"14.5"	""	"19.5"	"1.7"	"25.8"	"27.1"	""	"886"	"18"	"36.000"	"29.000"	"0.716809456675878"	"20"	"0.001615"	"0.01374"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"530.31525"	"1588.93119"	"1588.93104"	"0.09"	"0.00005"	"8/92"	"8"	"92"	"970078.151733398"	"HCD"	"MS2"	"29.92887"	"30.3"	"100.000"	"76.0665"	"25900"	"25900"	"25877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.3"	""	"41.6"	""	"33.8"	""	"51.3"	""	"59.5"	"61.1"	""	"885"	"36"	"36.000"	"29.000"	"0.0109625926050273"	"26"	"0"	"8.817E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLQEAGADISK"	"[R].vLQEAGADISk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"Q63530"	"Phosphotriesterase-related protein OS=Rattus norvegicus OX=10116 GN=Pter PE=2 SV=2"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"794.96948"	"1588.93169"	"1588.93104"	"0.41"	"0.00032"	"4/108"	"4"	"108"	"104174.284240723"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"81.2671"	"28036"	"28036"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"15.9"	""	"14.4"	""	"13.0"	""	"14.5"	"17.4"	""	"865"	"15"	"36.000"	"29.000"	"1.47906108887179"	"19"	"0.007069"	"0.08983"	"0.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"530.31543"	"1588.93174"	"1588.93104"	"0.44"	"0.00023"	"8/92"	"8"	"92"	"763032.846313477"	"HCD"	"MS2"	"41.64831"	"26.1"	"100.000"	"76.2220"	"25995"	"25995"	"25973"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"33.2"	""	"32.4"	""	"40.4"	""	"53.6"	"47.6"	""	"865"	"28"	"36.000"	"29.000"	"0.0698210075827455"	"18"	"0"	"7.36E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.7455"	"0.0000"	"1"	"1"	"1"	"794.96985"	"1588.93242"	"1588.93104"	"0.87"	"0.00069"	"10/92"	"10"	"92"	"677736.759765625"	"HCD"	"MS2"	"0"	"55.1"	"100.000"	"75.9891"	"25900"	"25900"	"25881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.9"	""	"64.4"	""	"77.6"	""	"96.3"	""	"109.8"	"91.8"	""	"860"	"55"	"36.000"	"29.000"	"0.000128963988316469"	""	"0"	"9.389E-07"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"794.96997"	"1588.93266"	"1588.93104"	"1.02"	"0.00081"	"8/92"	"8"	"92"	"155648.380859375"	"HCD"	"MS2"	"16.83002"	"14.7"	"100.000"	"76.1288"	"25925"	"25925"	"25909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"19.2"	""	"19.0"	""	"20.0"	""	"32.5"	"30.7"	""	"833"	"15"	"36.000"	"29.000"	"1.23769890221889"	"23"	"0.006033"	"0.07384"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"794.97040"	"1588.93352"	"1588.93104"	"1.56"	"0.00124"	"6/92"	"6"	"92"	"224420.004943848"	"HCD"	"MS2"	"37.77185"	"17.9"	"100.000"	"75.5848"	"25705"	"25705"	"25677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"21.8"	""	"23.4"	""	"32.1"	""	"35.5"	"29.5"	""	"836"	"38"	"36.000"	"29.000"	"0.00670156573308436"	""	"0"	"7.578E-06"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEGEGSVLQAK"	"[R].iEGEGSVLQAk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"794.97205"	"1588.93682"	"1588.93104"	"3.63"	"0.00289"	"6/92"	"6"	"92"	"198244.950195313"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"75.6829"	"25776"	"25776"	"25745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"19.1"	""	"25.0"	""	"25.9"	""	"30.8"	"28.2"	""	"886"	"34"	"36.000"	"29.000"	"0.0173142516836034"	""	"0.0001991"	"0.005581"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"530.60254"	"1589.79306"	"1589.79554"	"-1.56"	"-0.00082"	"5/74"	"5"	"74"	"1298402.36859131"	"HCD"	"MS2"	"49.43981"	"39.4"	"100.000"	"94.3616"	"33316"	"33316"	"33294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.6"	""	"50.3"	""	"58.0"	""	"63.1"	""	"80.0"	"76.5"	""	"736"	"36"	"35.000"	"28.000"	"0.00825748547952057"	""	"0.0001686"	"0.001871"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"530.60309"	"1589.79471"	"1589.79554"	"-0.52"	"-0.00028"	"10/74"	"10"	"74"	"714037.901306152"	"HCD"	"MS2"	"27.92813"	"25.8"	"100.000"	"94.7003"	"33452"	"33452"	"33436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"31.7"	""	"33.6"	""	"41.6"	""	"52.9"	"54.6"	""	"721"	"24"	"35.000"	"28.000"	"0.141222946697356"	"24"	"9.9E-05"	"0.0005139"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"530.60309"	"1589.79471"	"1589.79554"	"-0.52"	"-0.00028"	"7/74"	"7"	"74"	"1862885.64038086"	"HCD"	"MS2"	"24.11207"	"59.7"	"100.000"	"94.4684"	"33324"	"33324"	"33303"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.1"	""	"63.3"	""	"74.0"	""	"106.1"	"0.4"	"128.2"	"120.7"	""	"721"	"33"	"35.000"	"28.000"	"0.0201328505202627"	""	"0"	"0.0003444"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6346"	"0.0000"	"1"	"1"	"1"	"795.40100"	"1589.79473"	"1589.79554"	"-0.51"	"-0.00041"	"8/74"	"8"	"74"	"661793.150634766"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"94.7285"	"33429"	"33429"	"33418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.7"	""	"83.0"	""	"84.6"	""	"106.9"	""	"143.7"	"156.1"	""	"721"	"52"	"35.000"	"28.000"	"0.000250556266490761"	""	"0"	"1.834E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"795.40118"	"1589.79509"	"1589.79554"	"-0.28"	"-0.00022"	"5/74"	"5"	"74"	"158708.805175781"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"94.8915"	"33529"	"33529"	"33507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"16.4"	""	"19.8"	""	"18.5"	""	"32.5"	"25.4"	""	"729"	"13"	"35.000"	"28.000"	"1.78935920857624"	"14"	"0.007989"	"0.1015"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"795.40173"	"1589.79619"	"1589.79554"	"0.41"	"0.00033"	"16/74"	"16"	"74"	"1505411.5668335"	"HCD"	"MS2"	"0"	"147.1"	"100.000"	"94.5784"	"33404"	"33404"	"33391"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.5"	"3.0"	"148.4"	""	"185.8"	""	"224.1"	""	"308.8"	"339.2"	""	"735"	"56"	"35.000"	"28.000"	"8.32256783040449E-05"	""	"0"	"8.103E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"530.60376"	"1589.79673"	"1589.79554"	"0.75"	"0.00040"	"8/74"	"8"	"74"	"373841.283935547"	"HCD"	"MS2"	"54.82038"	"15.6"	"100.000"	"94.8253"	"33469"	"33469"	"33443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"15.6"	""	"23.7"	""	"24.2"	""	"37.6"	"33.3"	""	"748"	"21"	"35.000"	"28.000"	"0.312515528818487"	"25"	"0.0009352"	"0.008395"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6852"	"0.0000"	"1"	"1"	"1"	"795.40228"	"1589.79729"	"1589.79554"	"1.10"	"0.00088"	"16/74"	"16"	"74"	"1500737.53552246"	"HCD"	"MS2"	"7.903063"	"138.3"	"100.000"	"94.4221"	"33305"	"33305"	"33287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.1"	"2.5"	"160.0"	""	"180.0"	""	"219.1"	""	"282.5"	"297.2"	""	"735"	"54"	"35.000"	"28.000"	"0.000147318518728034"	""	"0"	"6.174E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESMk.[K]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"795.40350"	"1589.79973"	"1589.79554"	"2.64"	"0.00210"	"6/74"	"6"	"74"	"732357.248535156"	"HCD"	"MS2"	"67.7129"	"65.0"	"100.000"	"94.2878"	"33286"	"33286"	"33262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.3"	""	"74.6"	""	"76.6"	""	"105.0"	""	"128.9"	"136.7"	""	"731"	"36"	"35.000"	"28.000"	"0.00820138843142601"	"25"	"0"	"0.0001828"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"530.62537"	"1589.86155"	"1589.86309"	"-0.97"	"-0.00052"	"8/104"	"8"	"104"	"2685410.02832031"	"HCD"	"MS2"	"7.30892"	"61.6"	"100.000"	"69.3177"	"23161"	"23161"	"23139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.2"	""	"105.9"	""	"127.3"	""	"53.6"	""	"71.9"	"100.3"	""	"1064"	"51"	"37.000"	"30.000"	"0.000473054994700429"	"21"	"0"	"6.309E-07"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"530.62561"	"1589.86228"	"1589.86309"	"-0.51"	"-0.00027"	"8/104"	"8"	"104"	"3062048.84338379"	"HCD"	"MS2"	"10.67491"	"66.8"	"100.000"	"69.4070"	"23231"	"23231"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.2"	""	"118.1"	""	"145.3"	""	"44.9"	"0.7"	"70.6"	"108.9"	""	"1071"	"48"	"37.000"	"30.000"	"0.000943538172853428"	"22"	"0"	"3.246E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"530.62561"	"1589.86228"	"1589.86309"	"-0.51"	"-0.00027"	"8/104"	"8"	"104"	"2595934.09234619"	"HCD"	"MS2"	"26.78861"	"65.8"	"100.000"	"69.0070"	"23034"	"23034"	"23016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.7"	""	"110.7"	""	"136.2"	""	"49.5"	""	"79.7"	"114.6"	""	"1071"	"43"	"37.000"	"30.000"	"0.00292927048129722"	"21"	"0"	"4.055E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"530.62592"	"1589.86319"	"1589.86309"	"0.06"	"0.00003"	"8/104"	"8"	"104"	"2259881.50671387"	"HCD"	"MS2"	"28.41495"	"55.0"	"100.000"	"69.1028"	"23107"	"23107"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.9"	""	"93.9"	""	"109.6"	""	"40.7"	""	"72.8"	"92.1"	""	"1091"	"47"	"37.000"	"30.000"	"0.00105875324622686"	"20"	"0"	"8.246E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"530.63062"	"1589.87729"	"1589.87867"	"-0.87"	"-0.00046"	"14/96"	"14"	"96"	"1811519.51885986"	"HCD"	"MS2"	"19.52782"	"80.6"	"100.000"	"47.9865"	"14538"	"14538"	"14517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"109.8"	""	"106.3"	""	"122.6"	""	"140.9"	"3.2"	"147.0"	"133.1"	""	"1063"	"43"	"37.000"	"30.000"	"0.00269465561448005"	"19"	"0"	"7.593E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"530.63062"	"1589.87729"	"1589.87867"	"-0.87"	"-0.00046"	"11/96"	"11"	"96"	"3987485.5032959"	"HCD"	"MS2"	"23.52672"	"105.1"	"100.000"	"47.6943"	"14419"	"14419"	"14394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.3"	""	"128.4"	""	"141.9"	""	"188.3"	"2.3"	"194.0"	"177.9"	""	"1063"	"51"	"37.000"	"30.000"	"0.000410679730978366"	"22"	"0"	"1.083E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"530.63068"	"1589.87748"	"1589.87867"	"-0.75"	"-0.00040"	"14/96"	"14"	"96"	"4927496.22302246"	"HCD"	"MS2"	"8.988609"	"125.9"	"100.000"	"48.0557"	"14528"	"14528"	"14509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"198.2"	""	"160.7"	""	"160.3"	""	"214.0"	"0.1"	"233.1"	"226.3"	""	"1066"	"51"	"37.000"	"30.000"	"0.000471766620039835"	"21"	"0"	"1.566E-05"	"0.819"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"795.44275"	"1589.87822"	"1589.87867"	"-0.28"	"-0.00023"	"10/96"	"10"	"96"	"413642.174804688"	"HCD"	"MS2"	"0"	"32.5"	"100.000"	"47.5424"	"14357"	"14357"	"14335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.9"	""	"43.4"	""	"40.6"	""	"58.8"	"0.0"	"53.0"	"53.9"	""	"1075"	"64"	"37.000"	"30.000"	"2.13982604172505E-05"	"25"	"0"	"6.613E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"795.44287"	"1589.87847"	"1589.87867"	"-0.13"	"-0.00010"	"9/96"	"9"	"96"	"2750808.10546875"	"HCD"	"MS2"	"0"	"198.8"	"100.000"	"47.8371"	"14477"	"14477"	"14458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"347.8"	""	"234.8"	""	"281.6"	""	"319.6"	""	"350.2"	"347.1"	""	"1082"	"65"	"37.000"	"30.000"	"1.76277655242086E-05"	"27"	"0"	"3.751E-07"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"795.44305"	"1589.87883"	"1589.87867"	"0.10"	"0.00008"	"9/96"	"9"	"96"	"1529207.33544922"	"HCD"	"MS2"	"0"	"110.9"	"100.000"	"48.2102"	"14591"	"14591"	"14573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.7"	""	"134.0"	""	"146.5"	""	"171.4"	"0.9"	"200.4"	"208.9"	""	"1072"	"65"	"37.000"	"30.000"	"1.73846034899251E-05"	"27"	"0"	"1.596E-07"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPVDASGTEK"	"[R].vEPVDASGTEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8958"	"0.0000"	"1"	"1"	"1"	"795.44330"	"1589.87932"	"1589.87867"	"0.41"	"0.00032"	"10/96"	"10"	"96"	"821285.28137207"	"HCD"	"MS2"	"0"	"61.3"	"100.000"	"47.9221"	"14474"	"14474"	"14453"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.7"	""	"85.6"	""	"85.0"	""	"99.9"	""	"116.1"	"93.2"	""	"1061"	"48"	"37.000"	"30.000"	"0.000773900965076073"	"21"	"0"	"2.584E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEDTLQGLK"	"[K].vEEDTLQGLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"795.46082"	"1589.91435"	"1589.91506"	"-0.44"	"-0.00035"	"9/84"	"9"	"84"	"236765.543823242"	"HCD"	"MS2"	"13.21687"	"20.3"	"100.000"	"87.5259"	"30561"	"30561"	"30539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"17.7"	""	"19.3"	""	"43.1"	""	"44.4"	"41.4"	""	"1021"	"50"	"37.000"	"30.000"	"0.000483054070877238"	"28"	"0"	"5.571E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEEDTLQGLK"	"[K].vEEDTLQGLk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"795.46118"	"1589.91509"	"1589.91506"	"0.02"	"0.00001"	"8/84"	"8"	"84"	"159248.059020996"	"HCD"	"MS2"	"16.51224"	"15.2"	"100.000"	"87.7964"	"30635"	"30635"	"30617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"17.3"	""	"16.1"	""	"23.9"	""	"37.5"	"32.2"	""	"1036"	"27"	"37.000"	"30.000"	"0.108725085971699"	"17"	"0.001999"	"0.0176"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDSDVAVTLK"	"[K].sPDSDVAVTLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.46130"	"1589.91533"	"1589.91506"	"0.17"	"0.00014"	"7/96"	"7"	"96"	"191946.432495117"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"74.9720"	"25455"	"25455"	"25432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.6"	""	"19.8"	""	"25.5"	""	"30.4"	""	"30.8"	"35.1"	""	"1027"	"11"	"37.000"	"30.000"	"3.76305397766827"	"13"	"0.007642"	"0.09738"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDSDVAVTLK"	"[K].sPDSDVAVTLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"B2GUV7"	"Eukaryotic translation initiation factor 5B OS=Rattus norvegicus OX=10116 GN=Eif5b PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"795.46191"	"1589.91655"	"1589.91506"	"0.94"	"0.00075"	"8/96"	"8"	"96"	"281533.873840332"	"HCD"	"MS2"	"49.75402"	"20.1"	"100.000"	"75.0307"	"25510"	"25510"	"25488"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"18.4"	""	"27.3"	""	"34.9"	""	"35.2"	"46.4"	""	"1019"	"47"	"37.000"	"30.000"	"0.00109684229384207"	"19"	"0.0001686"	"0.001173"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.88898"	"1590.77068"	"1590.77115"	"-0.30"	"-0.00024"	"7/92"	"7"	"92"	"451303.973510742"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"114.6185"	"41389"	"41389"	"41369"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"34.2"	""	"32.3"	""	"20.3"	""	"39.9"	"43.7"	""	"588"	"50"	"34.000"	"27.000"	"0.000323107716793161"	"16"	"0.0001686"	"0.001178"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.88922"	"1590.77117"	"1590.77115"	"0.01"	"0.00001"	"7/92"	"7"	"92"	"501826.869506836"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"114.5696"	"41357"	"41357"	"41332"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"36.7"	""	"36.3"	""	"16.6"	""	"34.5"	"42.2"	""	"588"	"54"	"34.000"	"27.000"	"0.000126866608587363"	"16"	"0"	"0.000354"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVATTQMQAADAR"	"[K].vVATTQMQAADAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"795.92664"	"1590.84599"	"1590.84711"	"-0.70"	"-0.00056"	"8/124"	"8"	"124"	"200006.573547363"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"46.4487"	"13913"	"13913"	"13895"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"9.6"	""	"16.2"	""	"13.1"	""	"18.5"	"19.0"	""	"1050"	"36"	"37.000"	"30.000"	"0.0141631320203358"	"23"	"9.9E-05"	"0.0005819"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVATTQMQAADAR"	"[K].vVATTQMQAADAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"530.95380"	"1590.84684"	"1590.84711"	"-0.17"	"-0.00009"	"12/124"	"12"	"124"	"1245877.64624023"	"HCD"	"MS2"	"44.21717"	"58.9"	"100.000"	"46.9360"	"14073"	"14073"	"14051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.6"	""	"68.1"	""	"68.3"	""	"89.9"	"1.2"	"117.7"	"129.2"	""	"1042"	"14"	"37.000"	"30.000"	"2.12245124735943"	"13"	"9.9E-05"	"0.0009547"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVATTQMQAADAR"	"[K].vVATTQMQAADAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"P15684"	"Aminopeptidase N OS=Rattus norvegicus OX=10116 GN=Anpep PE=1 SV=2"	"0"	"2"	"2"	"0.8627"	"0.0000"	"1"	"1"	"1"	"795.92749"	"1590.84770"	"1590.84711"	"0.38"	"0.00030"	"10/124"	"10"	"124"	"220533.289489746"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"46.8535"	"14040"	"14040"	"14020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"16.5"	""	"18.5"	""	"16.9"	""	"20.0"	"22.8"	""	"1057"	"51"	"37.000"	"30.000"	"0.000400908248402923"	"23"	"0"	"2.448E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEGNNLLTEK"	"[R].dEGNNLLTEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"795.93951"	"1590.87175"	"1590.87392"	"-1.36"	"-0.00109"	"7/100"	"7"	"100"	"249952.611633301"	"HCD"	"MS2"	"40.6509"	"23.6"	"100.000"	"64.9260"	"21413"	"21413"	"21388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.2"	""	"26.0"	""	"32.8"	""	"42.2"	"1.9"	"40.4"	"40.3"	""	"1121"	"35"	"37.000"	"30.000"	"0.0176025512291762"	"21"	"0.0001991"	"0.00365"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALELDSNNEK"	"[K].aLELDSNNEk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"Q9QVC8"	"Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"795.93958"	"1590.87187"	"1590.87392"	"-1.29"	"-0.00102"	"4/90"	"4"	"90"	"135234.403259277"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"59.6102"	"19257"	"19257"	"19227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"16.7"	""	"13.5"	""	"26.4"	""	"25.2"	"20.6"	""	"1124"	"11"	"37.000"	"30.000"	"4.63165620637307"	"15"	"0.007601"	"0.09688"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEGNNLLTEK"	"[R].dEGNNLLTEk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"795.94000"	"1590.87273"	"1590.87392"	"-0.75"	"-0.00060"	"13/100"	"13"	"100"	"268469.992126465"	"HCD"	"MS2"	"26.98663"	"27.9"	"100.000"	"64.9914"	"21406"	"21406"	"21379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.7"	""	"30.7"	""	"36.1"	""	"47.8"	"2.3"	"53.0"	"51.0"	""	"1128"	"36"	"37.000"	"30.000"	"0.0156415253902364"	"21"	"0"	"0.0001551"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTQPGYANTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"795.94257"	"1590.87786"	"1590.88012"	"-1.42"	"-0.00113"	"11/122"	"11"	"122"	"767510.40625"	"HCD"	"MS2"	"0"	"41.6"	"100.000"	"55.4238"	"17561"	"17561"	"17538"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.6"	""	"61.9"	""	"70.1"	""	"48.6"	""	"77.3"	"77.3"	""	"1132"	"46"	"37.000"	"30.000"	"0.00149560335664422"	"28"	"0"	"0.0003795"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94269"	"1590.87810"	"1590.88012"	"-1.27"	"-0.00101"	"10/124"	"10"	"124"	"155967.243347168"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"47.4207"	"14270"	"14270"	"14242"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.8"	""	"7.7"	""	"6.6"	""	"10.0"	""	"10.0"	"12.6"	""	"1132"	"24"	"37.000"	"30.000"	"0.208360999081673"	"14"	"0.0001991"	"0.004676"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTQPGYANTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"795.94287"	"1590.87847"	"1590.88012"	"-1.04"	"-0.00083"	"10/122"	"10"	"122"	"294320.188110352"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"55.4611"	"17542"	"17542"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"27.9"	""	"28.9"	""	"22.6"	""	"38.0"	"38.5"	""	"1151"	"47"	"37.000"	"30.000"	"0.00124178190746736"	"26"	"0"	"0.0001928"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTQPGYANTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.6829"	"0.0000"	"1"	"1"	"1"	"795.94287"	"1590.87847"	"1590.88012"	"-1.04"	"-0.00083"	"10/122"	"10"	"122"	"716714.38458252"	"HCD"	"MS2"	"0"	"37.1"	"100.000"	"55.7415"	"17656"	"17656"	"17640"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.0"	""	"57.7"	""	"50.5"	""	"56.0"	"0.8"	"66.5"	"63.1"	""	"1151"	"41"	"37.000"	"30.000"	"0.00429581260464994"	"28"	"0.0001991"	"0.002168"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94312"	"1590.87895"	"1590.88012"	"-0.73"	"-0.00058"	"10/124"	"10"	"124"	"136131.435180664"	"HCD"	"MS2"	"100"	"7.0"	"100.000"	"47.0870"	"14172"	"14172"	"14145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"8.9"	""	"9.9"	""	"15.5"	""	"13.2"	"9.3"	""	"1160"	"15"	"37.000"	"30.000"	"1.92942540910523"	"13"	"0.0001686"	"0.001726"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTQPGYANTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"795.94336"	"1590.87944"	"1590.88012"	"-0.43"	"-0.00034"	"11/122"	"11"	"122"	"750854.748352051"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"56.0623"	"17784"	"17784"	"17768"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.7"	""	"53.3"	""	"59.1"	""	"48.5"	""	"71.1"	"76.6"	""	"1165"	"56"	"37.000"	"30.000"	"0.000133443040773723"	"28"	"0"	"0.0001068"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTQPGYANTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.6977"	"0.0000"	"1"	"1"	"1"	"795.94366"	"1590.88005"	"1590.88012"	"-0.04"	"-0.00003"	"17/122"	"17"	"122"	"675857.633056641"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"55.6964"	"17670"	"17670"	"17660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"50.7"	""	"51.3"	""	"46.5"	""	"64.5"	"61.8"	""	"1158"	"43"	"37.000"	"30.000"	"0.00260422535983214"	"28"	"0.0001991"	"0.00261"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94403"	"1590.88078"	"1590.88012"	"0.42"	"0.00033"	"7/124"	"7"	"124"	"123456.590942383"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"47.7335"	"14397"	"14397"	"14374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"6.9"	""	"6.7"	""	"9.0"	""	"11.0"	"10.3"	""	"1128"	"20"	"37.000"	"30.000"	"0.526355425649503"	"14"	"0.0001991"	"0.005334"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTQPGYANTLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.8085"	"0.0000"	"1"	"1"	"1"	"795.94403"	"1590.88078"	"1590.88012"	"0.42"	"0.00033"	"9/122"	"9"	"122"	"427981.142578125"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"55.1162"	"17435"	"17435"	"17410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"37.0"	""	"36.1"	""	"30.4"	""	"43.8"	"45.2"	""	"1128"	"47"	"37.000"	"30.000"	"0.00103342533421736"	"25"	"0.0001686"	"0.001034"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSAPPGPVPEGQIR"	"[K].gSAPPGPVPEGQIR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"Q9Z339"	"Glutathione S-transferase omega-1 OS=Rattus norvegicus OX=10116 GN=Gsto1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.94415"	"1590.88103"	"1590.88012"	"0.57"	"0.00045"	"4/124"	"4"	"124"	"125587.030151367"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"47.4344"	"14313"	"14313"	"14287"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.4"	""	"8.7"	""	"10.5"	""	"10.6"	""	"14.1"	"11.1"	""	"1131"	"18"	"37.000"	"30.000"	"0.949363672248308"	"14"	"0.003001"	"0.03254"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVENEVSTLK"	"[R].nVENEVSTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"795.95789"	"1590.90849"	"1590.91031"	"-1.14"	"-0.00091"	"7/100"	"7"	"100"	"161202.094665527"	"HCD"	"MS2"	"68.06562"	"15.6"	"100.000"	"72.0528"	"24270"	"24270"	"24251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"16.0"	""	"22.0"	""	"26.2"	""	"38.7"	"32.1"	""	"976"	"6"	"36.000"	"29.000"	"12.8949547357311"	"13"	"0.003529"	"0.03905"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVENEVSTLK"	"[R].nVENEVSTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"3"	"795.95813"	"1590.90898"	"1590.91031"	"-0.83"	"-0.00066"	"6/100"	"6"	"100"	"84215.3301391602"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"72.4007"	"24411"	"24411"	"24384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"7.9"	""	"7.9"	""	"15.8"	""	"16.6"	"17.7"	""	"968"	"10"	"36.000"	"29.000"	"4.7407315293781"	"18"	"0.005308"	"0.06801"	"0.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVENEVSTLK"	"[R].nVENEVSTLk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"795.95917"	"1590.91106"	"1590.91031"	"0.47"	"0.00038"	"8/100"	"8"	"100"	"133394.132568359"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"72.2299"	"24372"	"24372"	"24342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"10.4"	""	"19.3"	""	"27.2"	"0.9"	"33.3"	"28.6"	""	"962"	"16"	"36.000"	"29.000"	"1.13277870555398"	"19"	"0.002525"	"0.02479"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQTQPGYANTLR"	"[R].iQTqPGYANTLR.[E]"	"N-Term(TMT6plex); Q4(Deamidated)"	"1"	"1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"P16036"	"Phosphate carrier protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Slc25a3 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"796.43567"	"1591.86406"	"1591.86414"	"-0.05"	"-0.00004"	"4/122"	"4"	"122"	"141502.294677734"	"HCD"	"MS2"	"100"	"11.0"	"100.000"	"58.2201"	"18657"	"18657"	"18626"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"12.4"	""	"19.1"	""	"14.2"	""	"20.0"	"22.3"	""	"1084"	"7"	"37.000"	"30.000"	"9.7274562574323"	"13"	"0.001827"	"0.01537"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYSEAHEISK"	"[K].aYSEAHEISk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"P61983"	"14-3-3 protein gamma OS=Rattus norvegicus OX=10116 GN=Ywhag PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"796.93616"	"1592.86504"	"1592.86844"	"-2.14"	"-0.00170"	"4/84"	"4"	"84"	"82428.1637573242"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"37.9969"	"10485"	"10485"	"10455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.6"	""	"5.5"	""	"7.0"	""	"11.7"	""	"13.9"	"15.4"	""	"1084"	"14"	"37.000"	"30.000"	"2.20800110569829"	"14"	"0.009382"	"0.1228"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVTYTEHAK"	"[R].dAVTYTEHAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"531.62732"	"1592.86740"	"1592.86844"	"-0.65"	"-0.00035"	"8/84"	"8"	"84"	"8542004.31549072"	"HCD"	"MS2"	"25.56968"	"278.3"	"100.000"	"37.8684"	"10396"	"10396"	"10380"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"197.2"	""	"167.0"	""	"192.4"	""	"459.4"	""	"828.4"	"826.3"	""	"1061"	"53"	"37.000"	"30.000"	"0.000245293131852308"	"24"	"0"	"6.283E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAVTYTEHAK"	"[R].dAVTYTEHAk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"P62804"	"Histone H4 OS=Rattus norvegicus OX=10116 GN=Hist1h4b PE=1 SV=2"	"0"	"3"	"3"	"0.8491"	"0.0000"	"1"	"1"	"1"	"531.62762"	"1592.86832"	"1592.86844"	"-0.08"	"-0.00004"	"8/84"	"8"	"84"	"8216480.84570313"	"HCD"	"MS2"	"33.7856"	"246.3"	"100.000"	"37.7808"	"10396"	"10396"	"10378"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.9"	""	"157.1"	""	"159.9"	""	"395.9"	""	"723.2"	"755.2"	""	"1066"	"53"	"37.000"	"30.000"	"0.000244189625618846"	"24"	"0"	"2.382E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPLINAPHLER"	"[R].mGPLINAPHLER.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"531.63019"	"1592.87601"	"1592.87801"	"-1.26"	"-0.00067"	"10/100"	"10"	"100"	"4826508.65270996"	"HCD"	"MS2"	"24.46708"	"53.0"	"100.000"	"56.5927"	"18029"	"18029"	"18011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.8"	""	"52.1"	""	"48.8"	""	"107.8"	"0.7"	"122.6"	"115.4"	""	"1024"	"70"	"37.000"	"30.000"	"5.29992789339824E-06"	"22"	"0"	"1.007E-07"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGPLINAPHLER"	"[R].mGPLINAPHLER.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"531.63055"	"1592.87711"	"1592.87801"	"-0.57"	"-0.00030"	"8/100"	"8"	"100"	"5053047.18798828"	"HCD"	"MS2"	"28.86783"	"54.8"	"100.000"	"56.8871"	"18113"	"18113"	"18095"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.9"	""	"59.9"	""	"58.3"	""	"107.6"	"1.6"	"119.9"	"116.0"	""	"1057"	"53"	"37.000"	"30.000"	"0.0002825172639413"	"23"	"0"	"2.656E-06"	"0.978"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAIQAAGYPDK"	"[K].tAIQAAGYPDk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"796.95544"	"1592.90361"	"1592.90483"	"-0.76"	"-0.00061"	"8/112"	"8"	"112"	"340414.229736328"	"HCD"	"MS2"	"40.80383"	"28.5"	"100.000"	"58.7333"	"18902"	"18902"	"18871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.1"	""	"23.2"	""	"23.2"	""	"17.7"	""	"27.0"	"133.8"	""	"918"	"30"	"36.000"	"29.000"	"0.0419577977834844"	"20"	"0"	"5.048E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAIQAAGYPDK"	"[K].tAIQAAGYPDk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"796.95593"	"1592.90459"	"1592.90483"	"-0.15"	"-0.00012"	"8/112"	"8"	"112"	"469827.101867676"	"HCD"	"MS2"	"28.59593"	"40.6"	"100.000"	"58.9705"	"18963"	"18963"	"18933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.0"	""	"36.7"	""	"37.4"	""	"24.4"	""	"47.5"	"175.0"	""	"917"	"40"	"36.000"	"29.000"	"0.00438873481688687"	"20"	"0"	"2.229E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLENNHAQLLR"	"[K].rLENNHAQLLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"398.98428"	"1592.91530"	"1592.91824"	"-1.84"	"-0.00073"	"8/100"	"8"	"100"	"8671369.12030029"	"HCD"	"MS2"	"8.880782"	"125.1"	"100.000"	"27.4988"	"6253"	"6253"	"6230"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"171.7"	""	"160.2"	""	"155.6"	""	"204.7"	"2.4"	"237.8"	"253.9"	""	"874"	"31"	"36.000"	"29.000"	"0.0343147972324601"	"15"	"0.0001991"	"0.005602"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EESESVLTLK"	"[R].eESESVLTLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P20651; P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp3cb PE=1 SV=1; Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"796.96173"	"1592.91619"	"1592.91472"	"0.92"	"0.00073"	"8/86"	"8"	"86"	"139660.500854492"	"HCD"	"MS2"	"19.16564"	"12.5"	"100.000"	"84.1838"	"29214"	"29214"	"29196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"10.3"	""	"20.6"	""	"25.5"	""	"18.9"	"26.0"	""	"871"	"18"	"36.000"	"29.000"	"0.669866345851972"	"19"	"0.006613"	"0.08236"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RLENNHAQLLR"	"[K].rLENNHAQLLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"1"	"4"	"4"	"0.8400"	"0.0000"	"1"	"1"	"1"	"398.98453"	"1592.91628"	"1592.91824"	"-1.23"	"-0.00049"	"8/100"	"8"	"100"	"9238080.1831665"	"HCD"	"MS2"	"2.501658"	"122.0"	"100.000"	"27.7614"	"6319"	"6319"	"6309"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.2"	"2.8"	"152.4"	""	"157.2"	""	"227.8"	"4.4"	"226.1"	"231.3"	""	"871"	"25"	"36.000"	"29.000"	"0.133655907594435"	"18"	"0.001261"	"0.009531"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42023"	"1593.83318"	"1593.83554"	"-1.48"	"-0.00118"	"8/106"	"8"	"106"	"163389.685913086"	"HCD"	"MS2"	"39.19329"	"11.0"	"100.000"	"96.7102"	"34233"	"34233"	"34207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"11.7"	""	"14.3"	""	"20.1"	""	"24.1"	"22.5"	""	"913"	"13"	"36.000"	"29.000"	"2.49712787061098"	"13"	"0.002189"	"0.02104"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42035"	"1593.83342"	"1593.83554"	"-1.33"	"-0.00106"	"10/106"	"10"	"106"	"189133.692687988"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"97.3313"	"34515"	"34515"	"34490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"9.9"	""	"11.8"	""	"27.3"	""	"21.2"	"23.7"	""	"911"	"15"	"36.000"	"29.000"	"1.48418617306415"	"13"	"0.002373"	"0.02249"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"797.42072"	"1593.83415"	"1593.83554"	"-0.87"	"-0.00069"	"13/106"	"13"	"106"	"437399.38470459"	"HCD"	"MS2"	"37.15528"	"25.2"	"100.000"	"96.3894"	"34103"	"34103"	"34082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"27.4"	""	"27.2"	""	"59.5"	"0.2"	"44.5"	"52.2"	""	"915"	"46"	"36.000"	"29.000"	"0.00115183719444968"	"19"	"0.0001686"	"0.001597"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"797.42078"	"1593.83428"	"1593.83554"	"-0.79"	"-0.00063"	"13/106"	"13"	"106"	"453071.114929199"	"HCD"	"MS2"	"25.71677"	"23.5"	"100.000"	"96.4700"	"34167"	"34167"	"34155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"25.1"	""	"25.3"	""	"56.7"	""	"45.8"	"46.4"	""	"915"	"34"	"36.000"	"29.000"	"0.0177988153834883"	"21"	"0.0001991"	"0.005175"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42096"	"1593.83464"	"1593.83554"	"-0.56"	"-0.00045"	"12/106"	"12"	"106"	"207075.207336426"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"97.2575"	"34454"	"34454"	"34434"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"10.8"	""	"12.5"	""	"42.9"	""	"19.7"	"25.5"	""	"911"	"31"	"36.000"	"29.000"	"0.0347927199419638"	"14"	"0.00329"	"0.03546"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLDMDSIIAEVR"	"[R].sLDmDSIIAEVR.[A]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.42133"	"1593.83537"	"1593.83554"	"-0.10"	"-0.00008"	"10/106"	"10"	"106"	"132933.451477051"	"HCD"	"MS2"	"6.851433"	"8.5"	"100.000"	"97.5551"	"34574"	"34574"	"34551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"8.7"	""	"11.2"	""	"20.0"	""	"16.4"	"14.9"	""	"929"	"19"	"36.000"	"29.000"	"0.632391055005434"	"14"	"0.001453"	"0.01184"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANMPLPGYK"	"[K].eANmPLPGYk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"797.43823"	"1593.86919"	"1593.87109"	"-1.19"	"-0.00095"	"11/86"	"11"	"86"	"360267.514648438"	"HCD"	"MS2"	"0"	"27.6"	"100.000"	"56.3532"	"17899"	"17899"	"17877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.5"	""	"22.5"	""	"25.4"	""	"85.1"	"0.3"	"54.0"	"49.7"	""	"969"	"8"	"36.000"	"29.000"	"7.06795509103406"	"16"	"0.004213"	"0.04677"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANMPLPGYK"	"[K].eANmPLPGYk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"797.43896"	"1593.87065"	"1593.87109"	"-0.27"	"-0.00022"	"11/86"	"11"	"86"	"208358.250854492"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"56.6442"	"18015"	"18015"	"18001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"18.8"	""	"15.5"	""	"46.0"	""	"34.6"	"34.8"	""	"975"	"18"	"36.000"	"29.000"	"0.80163121506728"	"22"	"0.001261"	"0.009654"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANMPLPGYK"	"[K].eANmPLPGYk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"797.43909"	"1593.87090"	"1593.87109"	"-0.12"	"-0.00009"	"11/86"	"11"	"86"	"359654.053283691"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"55.9187"	"17758"	"17758"	"17744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	""	"20.1"	""	"26.5"	""	"78.0"	""	"56.1"	"43.1"	""	"975"	"18"	"36.000"	"29.000"	"0.786999796452912"	"22"	"0.001872"	"0.01538"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EANMPLPGYK"	"[K].eANmPLPGYk.[V]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"797.43945"	"1593.87163"	"1593.87109"	"0.34"	"0.00027"	"10/86"	"10"	"86"	"224960.252990723"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"56.2555"	"17894"	"17894"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"19.0"	""	"19.6"	""	"57.0"	""	"32.3"	"37.6"	""	"984"	"12"	"36.000"	"29.000"	"3.03364740915849"	"17"	"0.002588"	"0.02653"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGVVGPELHEK"	"[K].aGVVGPELHEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"531.98395"	"1593.93729"	"1593.93646"	"0.52"	"0.00028"	"8/86"	"8"	"86"	"3160111.28338623"	"HCD"	"MS2"	"29.05955"	"109.3"	"100.000"	"46.9997"	"14136"	"14136"	"14113"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.0"	""	"179.3"	""	"155.5"	""	"131.2"	""	"183.3"	"201.8"	""	"776"	"34"	"35.000"	"28.000"	"0.0144821061224739"	"16"	"0"	"5.282E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"797.93970"	"1594.87212"	"1594.87504"	"-1.83"	"-0.00146"	"7/114"	"7"	"114"	"472699.995849609"	"HCD"	"MS2"	"24.13794"	"23.8"	"100.000"	"59.0303"	"19022"	"19022"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.0"	""	"29.1"	""	"25.4"	""	"24.8"	""	"25.5"	"82.6"	""	"1034"	"32"	"37.000"	"30.000"	"0.0299564636052698"	"17"	"0.003818"	"0.04129"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"797.94061"	"1594.87395"	"1594.87504"	"-0.68"	"-0.00054"	"14/114"	"14"	"114"	"556772.868164063"	"HCD"	"MS2"	"6.975638"	"22.3"	"100.000"	"59.2859"	"19091"	"19091"	"19070"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"29.1"	""	"28.6"	""	"24.9"	""	"25.9"	"71.7"	""	"1024"	"34"	"37.000"	"30.000"	"0.0206666441199414"	"22"	"0.0001991"	"0.005316"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"532.29620"	"1594.87406"	"1594.87504"	"-0.61"	"-0.00033"	"8/114"	"8"	"114"	"7491835.80249023"	"HCD"	"MS2"	"20.30023"	"114.4"	"100.000"	"58.9384"	"18985"	"18985"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"185.8"	""	"129.2"	""	"155.4"	""	"188.9"	""	"178.8"	"246.6"	""	"1024"	"35"	"37.000"	"30.000"	"0.0162655952417268"	"20"	"0.0001686"	"0.001143"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"532.29620"	"1594.87406"	"1594.87504"	"-0.61"	"-0.00033"	"9/114"	"9"	"114"	"9144704.07489014"	"HCD"	"MS2"	"3.212822"	"125.5"	"100.000"	"59.2329"	"19105"	"19105"	"19089"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"225.4"	""	"158.2"	""	"186.8"	""	"191.2"	"0.4"	"181.1"	"242.5"	""	"1024"	"46"	"37.000"	"30.000"	"0.00128312793755244"	"16"	"9.9E-05"	"0.0006504"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"532.29620"	"1594.87406"	"1594.87504"	"-0.61"	"-0.00033"	"9/114"	"9"	"114"	"9515556.18731689"	"HCD"	"MS2"	"1.915612"	"128.6"	"100.000"	"59.4171"	"19145"	"19145"	"19130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"200.7"	""	"165.0"	""	"203.1"	""	"194.5"	""	"199.7"	"254.8"	""	"1024"	"46"	"37.000"	"30.000"	"0.00127136414991133"	"18"	"0"	"0.0002665"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"532.29645"	"1594.87479"	"1594.87504"	"-0.15"	"-0.00008"	"8/114"	"8"	"114"	"7389499.65924072"	"HCD"	"MS2"	"28.63961"	"122.0"	"100.000"	"59.1247"	"19025"	"19025"	"19006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"181.3"	""	"147.5"	""	"156.9"	""	"224.5"	""	"172.2"	"276.5"	""	"1039"	"35"	"37.000"	"30.000"	"0.0161281870603268"	"19"	"9.9E-05"	"0.0004069"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRLEQEIATYR"	"[K].sRLEQEIATYR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"532.29669"	"1594.87552"	"1594.87504"	"0.31"	"0.00016"	"9/114"	"9"	"114"	"1894203.871521"	"HCD"	"MS2"	"17.10131"	"46.8"	"100.000"	"59.5137"	"19218"	"19218"	"19204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.6"	""	"59.9"	""	"67.8"	""	"74.8"	""	"81.0"	"92.7"	""	"1025"	"38"	"37.000"	"30.000"	"0.00840802258764764"	"19"	"0.0001686"	"0.001949"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAFEADNLK"	"[K].tQAFEADNLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"797.94421"	"1594.88115"	"1594.88409"	"-1.84"	"-0.00147"	"6/100"	"6"	"100"	"172692.410400391"	"HCD"	"MS2"	"26.71186"	"17.2"	"100.000"	"71.0960"	"23915"	"23915"	"23893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"21.2"	""	"26.1"	""	"18.8"	""	"36.5"	"35.1"	""	"1055"	"9"	"37.000"	"30.000"	"6.59511638439847"	"16"	"0.009514"	"0.1276"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAFEADNLK"	"[K].tQAFEADNLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.8846"	"0.0000"	"1"	"1"	"1"	"797.94641"	"1594.88555"	"1594.88409"	"0.91"	"0.00073"	"6/100"	"6"	"100"	"296109.558105469"	"HCD"	"MS2"	"56.02785"	"33.3"	"100.000"	"70.7870"	"23791"	"23791"	"23770"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.6"	""	"39.1"	""	"50.5"	""	"42.3"	""	"64.9"	"65.2"	""	"1015"	"26"	"37.000"	"30.000"	"0.13256718873576"	"17"	"0.002508"	"0.02336"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAFEADNLK"	"[K].tQAFEADNLk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"797.94653"	"1594.88579"	"1594.88409"	"1.06"	"0.00085"	"7/100"	"7"	"100"	"295916.883483887"	"HCD"	"MS2"	"39.74"	"35.0"	"100.000"	"70.7255"	"23733"	"23733"	"23712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"49.1"	""	"48.6"	""	"47.4"	""	"61.7"	"66.3"	""	"1016"	"53"	"37.000"	"30.000"	"0.000269689297669342"	"27"	"0"	"1.536E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPLGTELHK"	"[K].lEPLGTELHk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"532.32385"	"1594.95700"	"1594.95686"	"0.09"	"0.00005"	"8/82"	"8"	"82"	"1333095.95977783"	"HCD"	"MS2"	"16.5463"	"40.2"	"100.000"	"79.8135"	"27418"	"27418"	"27399"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.2"	""	"45.5"	""	"45.3"	""	"64.2"	""	"86.1"	"98.2"	""	"584"	"52"	"34.000"	"27.000"	"0.000196509183635021"	"20"	"0"	"2.176E-06"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPLGTELHK"	"[K].lEPLGTELHk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"532.32397"	"1594.95737"	"1594.95686"	"0.32"	"0.00017"	"8/82"	"8"	"82"	"1861279.54284668"	"HCD"	"MS2"	"25.0657"	"55.8"	"100.000"	"79.7116"	"27404"	"27404"	"27382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.1"	""	"65.6"	""	"66.6"	""	"85.2"	"0.8"	"124.8"	"124.5"	""	"578"	"57"	"34.000"	"27.000"	"5.369054875215E-05"	"22"	"0"	"4.386E-06"	"0.933"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPLGTELHK"	"[K].lEPLGTELHk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"532.32410"	"1594.95774"	"1594.95686"	"0.55"	"0.00029"	"8/82"	"8"	"82"	"1357718.73822021"	"HCD"	"MS2"	"42.99731"	"42.6"	"100.000"	"79.4882"	"27286"	"27286"	"27259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.2"	""	"46.0"	""	"53.4"	""	"73.3"	""	"91.8"	"94.6"	""	"569"	"53"	"34.000"	"27.000"	"0.000155984796519983"	"23"	"0"	"3.87E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLNnAmk.[G]"	"N-Term(TMT6plex); N8(Deamidated); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"798.93628"	"1596.86528"	"1596.86673"	"-0.91"	"-0.00072"	"8/94"	"8"	"94"	"128189.369140625"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"54.4290"	"17155"	"17155"	"17125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"10.8"	""	"10.2"	""	"28.4"	""	"14.7"	"14.6"	""	"960"	"20"	"36.000"	"29.000"	"0.465844784277835"	"29"	"0.002035"	"0.01787"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSGSLLNNAMK"	"[R].sSGSLLnNAmk.[G]"	"N-Term(TMT6plex); N7(Deamidated); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"798.93707"	"1596.86687"	"1596.86673"	"0.09"	"0.00007"	"7/94"	"7"	"94"	"158525.151489258"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"51.9221"	"16098"	"16098"	"16069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"11.5"	""	"12.9"	""	"40.5"	""	"18.6"	"21.7"	""	"965"	"11"	"36.000"	"29.000"	"4.14474024126354"	"13"	"0.008135"	"0.1034"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SSGSLLNNAMK"	"[R].sSGSLLnNAmk.[G]"	"N-Term(TMT6plex); N7(Deamidated); M10(Oxidation); K11(TMT6plex)"	"1"	"2"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P06238; P14046"	"Alpha-2-macroglobulin OS=Rattus norvegicus OX=10116 GN=A2m PE=2 SV=2; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"3"	"798.93781"	"1596.86833"	"1596.86673"	"1.00"	"0.00080"	"5/94"	"5"	"94"	"189027.666442871"	"HCD"	"MS2"	"68.27271"	"12.7"	"100.000"	"51.5884"	"15997"	"15997"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"15.6"	""	"15.4"	""	"29.9"	""	"21.3"	"17.9"	""	"992"	"3"	"36.000"	"29.000"	"23.5766272067632"	"15"	"0.006343"	"0.07898"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"798.94519"	"1596.88310"	"1596.88851"	"-3.38"	"-0.00270"	"12/88"	"12"	"88"	"164092.957946777"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"76.9044"	"26241"	"26241"	"26228"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.1"	""	"18.8"	""	"22.2"	""	"27.2"	""	"25.6"	"32.9"	""	"942"	"38"	"36.000"	"29.000"	"0.0073285981248599"	"21"	"9.9E-05"	"0.0004791"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"798.94769"	"1596.88811"	"1596.88851"	"-0.25"	"-0.00020"	"8/88"	"8"	"88"	"341059.191589355"	"HCD"	"MS2"	"0"	"31.0"	"100.000"	"76.6945"	"26187"	"26187"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"34.7"	""	"50.0"	""	"46.1"	""	"62.7"	"55.0"	""	"937"	"56"	"36.000"	"29.000"	"0.000121817475534293"	""	"0"	"2.807E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"532.96777"	"1596.88877"	"1596.88851"	"0.16"	"0.00009"	"7/88"	"7"	"88"	"1033337.64801025"	"HCD"	"MS2"	"17.561"	"31.7"	"100.000"	"76.7441"	"26176"	"26176"	"26152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.4"	""	"41.1"	""	"43.5"	""	"53.4"	"0.2"	"55.0"	"63.0"	""	"927"	"39"	"36.000"	"29.000"	"0.00613832301562727"	"19"	"0"	"0.0003274"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"798.94824"	"1596.88921"	"1596.88851"	"0.44"	"0.00035"	"9/88"	"9"	"88"	"404055.902770996"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"76.6245"	"26127"	"26127"	"26104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"50.1"	""	"48.2"	""	"62.6"	""	"76.9"	"66.9"	""	"932"	"69"	"36.000"	"29.000"	"6.32974066109613E-06"	""	"0"	"7.962E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAIEGTYIDK"	"[K].eAIEGTYIDk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"P62282"	"40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"532.96838"	"1596.89060"	"1596.88851"	"1.31"	"0.00070"	"7/88"	"7"	"88"	"1047813.92919922"	"HCD"	"MS2"	"13.46469"	"34.8"	"100.000"	"76.7935"	"26227"	"26227"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.7"	""	"36.8"	""	"47.5"	""	"56.0"	""	"68.0"	"75.2"	""	"943"	"43"	"36.000"	"29.000"	"0.0021851522265566"	"23"	"0"	"0.0002425"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEMVHTGLK"	"[K].hAEmVHTGLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"399.97824"	"1596.89113"	"1596.89322"	"-1.31"	"-0.00052"	"8/80"	"8"	"80"	"5689518.04632568"	"HCD"	"MS2"	"43.14848"	"237.1"	"100.000"	"24.6443"	"5128"	"5128"	"5105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.1"	""	"258.5"	""	"276.2"	""	"587.6"	"3.9"	"450.9"	"418.2"	""	"929"	"28"	"36.000"	"29.000"	"0.0671406773511484"	"14"	"0.0001991"	"0.003155"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HAEMVHTGLK"	"[K].hAEmVHTGLk.[L]"	"N-Term(TMT6plex); M4(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"4"	"4"	"0.9688"	"0.0000"	"1"	"1"	"1"	"399.97858"	"1596.89248"	"1596.89322"	"-0.46"	"-0.00019"	"8/80"	"8"	"80"	"5823144.00183105"	"HCD"	"MS2"	"38.0251"	"238.5"	"100.000"	"24.7663"	"5140"	"5140"	"5121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"256.0"	""	"255.4"	""	"282.5"	""	"575.0"	"5.9"	"461.3"	"426.8"	""	"935"	"32"	"36.000"	"29.000"	"0.0303935630235395"	"15"	"0.0001991"	"0.002382"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSAALSTMGSAISR"	"[K].tSAALSTmGSAISR.[K]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"Q6PCT3"	"Tumor protein D54 OS=Rattus norvegicus OX=10116 GN=Tpd52l2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.42389"	"1597.84050"	"1597.84169"	"-0.74"	"-0.00059"	"5/128"	"5"	"128"	"182979.573059082"	"HCD"	"MS2"	"100"	"8.0"	"100.000"	"42.5959"	"12313"	"12313"	"12286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"6.0"	""	"11.6"	""	"20.1"	""	"16.4"	"14.6"	""	"903"	"9"	"36.000"	"29.000"	"6.31913676141537"	"13"	"0.0001686"	"0.001298"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNRPSEGPLQTR"	"[K].nNRPSEGPLQTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"533.29132"	"1597.85941"	"1597.86078"	"-0.86"	"-0.00046"	"15/122"	"15"	"122"	"454715.261169434"	"HCD"	"MS2"	"7.541892"	"27.0"	"100.000"	"23.7862"	"4740"	"4740"	"4712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.4"	""	"24.7"	""	"35.3"	""	"54.7"	""	"50.0"	"55.9"	""	"917"	"11"	"36.000"	"29.000"	"3.32919581484019"	"13"	"0.0001991"	"0.004371"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNRPSEGPLQTR"	"[K].nNRPSEGPLQTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"533.29175"	"1597.86069"	"1597.86078"	"-0.06"	"-0.00003"	"9/122"	"9"	"122"	"770088.758056641"	"HCD"	"MS2"	"10.41802"	"34.0"	"100.000"	"23.6913"	"4739"	"4739"	"4714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.0"	""	"39.0"	""	"43.3"	""	"68.3"	""	"58.1"	"62.3"	""	"910"	"29"	"36.000"	"29.000"	"0.0575455038099374"	"19"	"0"	"0.0001051"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"533.29193"	"1597.86124"	"1597.86263"	"-0.87"	"-0.00046"	"10/82"	"10"	"82"	"938302.962219238"	"HCD"	"MS2"	"15.09123"	"36.0"	"100.000"	"78.1811"	"26754"	"26754"	"26726"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.8"	""	"43.9"	""	"38.4"	""	"51.3"	""	"62.4"	"78.1"	""	"902"	"27"	"36.000"	"29.000"	"0.0991234802625956"	"18"	"0.0001991"	"0.004969"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"533.29193"	"1597.86124"	"1597.86263"	"-0.87"	"-0.00046"	"10/82"	"10"	"82"	"1317503.27270508"	"HCD"	"MS2"	"16.63027"	"43.7"	"100.000"	"78.4738"	"26873"	"26873"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.3"	""	"55.0"	""	"53.4"	""	"59.1"	""	"78.1"	"95.0"	""	"902"	"35"	"36.000"	"29.000"	"0.0148312085525068"	"16"	"0.0001991"	"0.003829"	"0.328"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"533.29199"	"1597.86142"	"1597.86263"	"-0.75"	"-0.00040"	"10/82"	"10"	"82"	"1327038.30194092"	"HCD"	"MS2"	"6.133836"	"43.6"	"100.000"	"78.5750"	"26941"	"26941"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.7"	""	"56.1"	""	"58.7"	""	"64.2"	""	"82.4"	"90.1"	""	"905"	"33"	"36.000"	"29.000"	"0.021410094468007"	"22"	"0.0001686"	"0.001584"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"533.29211"	"1597.86179"	"1597.86263"	"-0.53"	"-0.00028"	"9/82"	"9"	"82"	"796446.659179688"	"HCD"	"MS2"	"6.297498"	"26.5"	"100.000"	"78.2732"	"26818"	"26818"	"26797"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.9"	""	"35.4"	""	"36.5"	""	"41.0"	""	"46.6"	"48.9"	""	"903"	"29"	"36.000"	"29.000"	"0.0507759145746067"	"23"	"0.0001686"	"0.001413"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8857"	"0.0000"	"1"	"1"	"1"	"799.43469"	"1597.86211"	"1597.86263"	"-0.33"	"-0.00026"	"7/82"	"7"	"82"	"831296.525085449"	"HCD"	"MS2"	"0"	"73.0"	"100.000"	"78.3933"	"26840"	"26840"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.8"	""	"84.9"	""	"85.6"	""	"107.5"	"0.4"	"138.7"	"141.0"	""	"902"	"35"	"36.000"	"29.000"	"0.0143938357265044"	"19"	"0.0001686"	"0.001966"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"799.43475"	"1597.86223"	"1597.86263"	"-0.25"	"-0.00020"	"9/82"	"9"	"82"	"332633.852355957"	"HCD"	"MS2"	"45.10264"	"32.5"	"100.000"	"78.0913"	"26717"	"26717"	"26698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.0"	""	"35.0"	""	"39.2"	""	"49.1"	"0.6"	"60.9"	"53.4"	""	"902"	"13"	"36.000"	"29.000"	"2.38878213195138"	"19"	"0.001348"	"0.01115"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"799.43481"	"1597.86235"	"1597.86263"	"-0.17"	"-0.00014"	"7/82"	"7"	"82"	"748195.555725098"	"HCD"	"MS2"	"0"	"66.4"	"100.000"	"78.5680"	"26938"	"26938"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"140.9"	""	"80.8"	""	"70.9"	""	"97.8"	""	"123.3"	"114.5"	""	"902"	"34"	"36.000"	"29.000"	"0.0169893413341743"	"22"	"0.0001686"	"0.00104"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"799.43518"	"1597.86308"	"1597.86263"	"0.29"	"0.00023"	"10/82"	"10"	"82"	"291051.888671875"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"78.6974"	"26964"	"26964"	"26945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"32.7"	""	"32.8"	""	"43.3"	"0.4"	"51.4"	"48.9"	""	"931"	"27"	"36.000"	"29.000"	"0.0876838651157502"	"17"	"0.0001991"	"0.00375"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQNFDPEVK"	"[K].yQNFDPEVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"799.43536"	"1597.86345"	"1597.86263"	"0.51"	"0.00041"	"6/82"	"6"	"82"	"409923.191040039"	"HCD"	"MS2"	"30.95236"	"38.8"	"100.000"	"78.2664"	"26815"	"26815"	"26797"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.9"	""	"51.1"	""	"40.8"	""	"66.3"	"1.5"	"67.6"	"57.5"	""	"921"	"23"	"36.000"	"29.000"	"0.241118001047738"	"15"	"0.001261"	"0.01026"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"533.62756"	"1598.86814"	"1598.88640"	"-11.42"	"-0.00609"	"8/74"	"8"	"74"	"284987.322509766"	"HCD"	"MS2"	"27.75698"	"15.8"	"100.000"	"76.9640"	"26264"	"26264"	"26251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.8"	""	"18.7"	""	"21.1"	""	"21.9"	""	"30.9"	"33.8"	""	"949"	"7"	"36.000"	"29.000"	"9.55512156559703"	"14"	"0.006542"	"0.08108"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"799.94525"	"1598.88323"	"1598.88640"	"-1.99"	"-0.00159"	"8/74"	"8"	"74"	"464468.855834961"	"HCD"	"MS2"	"0"	"39.4"	"100.000"	"74.1871"	"25168"	"25168"	"25142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.3"	""	"39.9"	""	"42.4"	""	"90.3"	""	"80.3"	"73.5"	""	"877"	"48"	"36.000"	"29.000"	"0.000669837716537396"	"16"	"0.0001991"	"0.004175"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"533.63324"	"1598.88517"	"1598.88640"	"-0.77"	"-0.00041"	"8/74"	"8"	"74"	"2305146.84161377"	"HCD"	"MS2"	"44.07654"	"65.4"	"100.000"	"74.3921"	"25251"	"25251"	"25233"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.0"	""	"82.1"	""	"78.6"	""	"140.8"	""	"126.6"	"123.4"	""	"895"	"28"	"36.000"	"29.000"	"0.0793949792698349"	"21"	"0.0001991"	"0.00484"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"799.94623"	"1598.88518"	"1598.88640"	"-0.76"	"-0.00061"	"7/74"	"7"	"74"	"1355396.22076416"	"HCD"	"MS2"	"0"	"98.8"	"100.000"	"74.4957"	"25293"	"25293"	"25277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"104.5"	""	"107.4"	""	"121.0"	""	"228.6"	""	"194.8"	"181.7"	""	"895"	"31"	"36.000"	"29.000"	"0.0324185092133558"	"17"	"9.9E-05"	"0.0009757"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"799.94629"	"1598.88530"	"1598.88640"	"-0.69"	"-0.00055"	"8/74"	"8"	"74"	"972023.329650879"	"HCD"	"MS2"	"0"	"73.2"	"100.000"	"74.8047"	"25418"	"25418"	"25404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.7"	""	"84.9"	""	"90.7"	""	"170.1"	""	"136.2"	"133.9"	""	"895"	"47"	"36.000"	"29.000"	"0.000803143298007555"	"19"	"0.0001991"	"0.005523"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"533.63330"	"1598.88535"	"1598.88640"	"-0.66"	"-0.00035"	"10/74"	"10"	"74"	"1727456.45245361"	"HCD"	"MS2"	"27.79366"	"50.4"	"100.000"	"74.5365"	"25279"	"25279"	"25262"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.1"	""	"66.5"	""	"58.8"	""	"103.9"	""	"100.5"	"96.8"	""	"888"	"36"	"36.000"	"29.000"	"0.0123419269088512"	"22"	"9.9E-05"	"0.0009933"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"533.63330"	"1598.88535"	"1598.88640"	"-0.66"	"-0.00035"	"7/74"	"7"	"74"	"2224461.73419189"	"HCD"	"MS2"	"47.01952"	"63.9"	"100.000"	"74.2483"	"25163"	"25163"	"25142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.1"	""	"74.7"	""	"73.3"	""	"132.8"	""	"129.3"	"130.8"	""	"888"	"18"	"36.000"	"29.000"	"0.649206665458782"	"20"	"0.0009352"	"0.008189"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"533.63336"	"1598.88553"	"1598.88640"	"-0.54"	"-0.00029"	"10/74"	"10"	"74"	"1631425.61602783"	"HCD"	"MS2"	"30.14021"	"47.1"	"100.000"	"74.7147"	"25382"	"25382"	"25363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"55.0"	""	"63.7"	""	"100.9"	"0.7"	"89.4"	"89.1"	""	"888"	"37"	"36.000"	"29.000"	"0.00802385311948851"	"24"	"0.0001686"	"0.00134"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.94641"	"1598.88555"	"1598.88640"	"-0.54"	"-0.00043"	"7/74"	"7"	"74"	"382721.184143066"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"74.0339"	"25076"	"25076"	"25052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.2"	""	"34.8"	""	"44.2"	""	"64.4"	""	"59.0"	"55.4"	""	"888"	"29"	"36.000"	"29.000"	"0.0581276773811736"	"14"	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.94666"	"1598.88603"	"1598.88640"	"-0.23"	"-0.00018"	"14/74"	"14"	"74"	"1462422.4664917"	"HCD"	"MS2"	"0"	"106.9"	"100.000"	"74.3680"	"25211"	"25211"	"25199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.9"	""	"119.1"	""	"125.6"	""	"246.5"	""	"218.3"	"189.0"	""	"884"	"41"	"36.000"	"29.000"	"0.00368487083601878"	"15"	"9.9E-05"	"0.0005422"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VMIYQDEVK"	"[K].vmIYQDEVk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K9(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"799.94678"	"1598.88628"	"1598.88640"	"-0.08"	"-0.00006"	"14/74"	"14"	"74"	"1063619.95574951"	"HCD"	"MS2"	"0"	"85.2"	"100.000"	"74.6562"	"25327"	"25327"	"25314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.7"	""	"111.3"	""	"109.2"	""	"203.2"	"0.6"	"150.5"	"142.4"	""	"884"	"41"	"36.000"	"29.000"	"0.00357620387436845"	"16"	"0.001488"	"0.01212"	"0.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].GAAQNIIPASTGAAk.[A]"	"K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"799.95569"	"1598.90410"	"1598.90634"	"-1.40"	"-0.00112"	"6/136"	"6"	"136"	"182025.960205078"	"HCD"	"MS2"	"30.47087"	"16.6"	"100.000"	"51.6603"	"16026"	"16026"	"15999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"25.4"	""	"23.4"	""	"22.4"	""	"23.1"	"28.5"	""	"872"	"23"	"36.000"	"29.000"	"0.237403156639296"	"16"	"0.004234"	"0.04821"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].GAAQNIIPASTGAAk.[A]"	"K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"799.95709"	"1598.90691"	"1598.90634"	"0.36"	"0.00029"	"8/136"	"8"	"136"	"183321.149414063"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"52.2563"	"16234"	"16234"	"16211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"16.1"	""	"15.1"	""	"19.4"	"1.1"	"17.6"	"24.1"	""	"836"	"68"	"36.000"	"29.000"	"6.23988063204019E-06"	"23"	"0"	"0.0003956"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAQNIIPASTGAAK"	"[R].GAAQNIIPASTGAAk.[A]"	"K15(TMT6plex)"	"1"	"1"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"P04797"	"Glyceraldehyde-3-phosphate dehydrogenase OS=Rattus norvegicus OX=10116 GN=Gapdh PE=1 SV=3"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"799.95807"	"1598.90886"	"1598.90634"	"1.58"	"0.00126"	"8/136"	"8"	"136"	"145670.21875"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"51.9685"	"16151"	"16151"	"16123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"18.9"	""	"10.6"	""	"14.8"	""	"20.8"	"18.9"	""	"838"	"68"	"36.000"	"29.000"	"6.56468698375315E-06"	"23"	"0"	"0.0001758"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"799.97876"	"1598.95024"	"1598.95178"	"-0.96"	"-0.00077"	"6/100"	"6"	"100"	"121038.081542969"	"HCD"	"MS2"	"33.73283"	"10.0"	"100.000"	"83.8338"	"29044"	"29044"	"29023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"9.2"	""	"10.5"	""	"13.7"	""	"26.8"	"18.2"	""	"646"	"11"	"35.000"	"28.000"	"2.46151520238208"	"22"	"0.004792"	"0.05673"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.5952"	"0.0000"	"1"	"1"	"1"	"533.65497"	"1598.95035"	"1598.95178"	"-0.89"	"-0.00048"	"11/100"	"11"	"100"	"1578753.87420654"	"HCD"	"MS2"	"17.5244"	"40.0"	"100.000"	"84.3823"	"29294"	"29294"	"29283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.9"	""	"45.0"	""	"43.4"	""	"76.3"	""	"84.9"	"72.9"	""	"646"	"42"	"35.000"	"28.000"	"0.00198245127668229"	""	"0"	"0.0001016"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"799.97919"	"1598.95110"	"1598.95178"	"-0.43"	"-0.00034"	"12/100"	"12"	"100"	"168839.793395996"	"HCD"	"MS2"	"34.52969"	"13.5"	"100.000"	"83.8951"	"29098"	"29098"	"29073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.9"	""	"14.5"	""	"16.1"	""	"21.7"	"1.6"	"28.1"	"20.7"	""	"642"	"45"	"35.000"	"28.000"	"0.00111302528995263"	"26"	"9.9E-05"	"0.000718"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.6444"	"0.0000"	"1"	"1"	"1"	"799.97943"	"1598.95159"	"1598.95178"	"-0.12"	"-0.00010"	"12/100"	"12"	"100"	"256819.653198242"	"HCD"	"MS2"	"6.919633"	"20.8"	"100.000"	"84.4585"	"29325"	"29325"	"29308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"22.3"	""	"25.5"	""	"42.0"	""	"36.6"	"39.2"	""	"646"	"45"	"35.000"	"28.000"	"0.00105245254423649"	""	"9.9E-05"	"0.0004071"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"533.65540"	"1598.95163"	"1598.95178"	"-0.09"	"-0.00005"	"12/100"	"12"	"100"	"818689.176452637"	"HCD"	"MS2"	"31.65441"	"26.3"	"100.000"	"84.5698"	"29342"	"29342"	"29318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"25.9"	""	"32.4"	""	"49.2"	"1.1"	"56.5"	"49.7"	""	"646"	"28"	"35.000"	"28.000"	"0.0467953308694958"	"22"	"0"	"0.0001614"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"799.97968"	"1598.95207"	"1598.95178"	"0.18"	"0.00015"	"10/100"	"10"	"100"	"250593.859924316"	"HCD"	"MS2"	"9.740304"	"20.7"	"100.000"	"84.4546"	"29295"	"29295"	"29279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	""	"24.0"	""	"23.3"	""	"28.7"	""	"44.0"	"42.2"	""	"646"	"18"	"35.000"	"28.000"	"0.544756627200563"	"23"	"0.0001991"	"0.004471"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"799.97968"	"1598.95207"	"1598.95178"	"0.18"	"0.00015"	"11/100"	"11"	"100"	"321651.814575195"	"HCD"	"MS2"	"6.506158"	"25.8"	"100.000"	"84.1499"	"29172"	"29172"	"29146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.2"	""	"28.3"	""	"22.2"	""	"50.3"	""	"55.3"	"52.8"	""	"646"	"32"	"35.000"	"28.000"	"0.0204739916735987"	"25"	"0"	"0.0003688"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAQLPVIENK"	"[K].eAQLPVIENk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"Q01177"	"Plasminogen OS=Rattus norvegicus OX=10116 GN=Plg PE=2 SV=2"	"0"	"2"	"2"	"0.4423"	"0.0000"	"1"	"1"	"1"	"799.97974"	"1598.95220"	"1598.95178"	"0.26"	"0.00021"	"14/100"	"14"	"100"	"398396.148742676"	"HCD"	"MS2"	"10.52195"	"28.7"	"100.000"	"84.1680"	"29207"	"29207"	"29196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.9"	""	"31.1"	""	"31.3"	""	"45.7"	"0.4"	"53.3"	"58.5"	""	"643"	"52"	"35.000"	"28.000"	"0.000196417861007141"	""	"0"	"2.096E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8551"	"0.0000"	"1"	"1"	"1"	"800.47089"	"1599.93450"	"1599.93579"	"-0.81"	"-0.00065"	"9/96"	"9"	"96"	"5438863.11883545"	"HCD"	"MS2"	"0"	"330.7"	"100.000"	"101.7129"	"36285"	"36285"	"36272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"521.8"	""	"444.3"	""	"488.3"	""	"450.3"	"0.1"	"591.1"	"635.9"	""	"780"	"69"	"35.000"	"28.000"	"5.29742244168989E-06"	"27"	"0"	"4.385E-07"	"1.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"533.98309"	"1599.93473"	"1599.93579"	"-0.67"	"-0.00036"	"12/96"	"12"	"96"	"8402265.77374268"	"HCD"	"MS2"	"3.368027"	"133.3"	"68.350"	"101.7173"	"36286"	"36286"	"36272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"221.4"	"3.0"	"182.4"	""	"195.2"	""	"196.4"	"3.0"	"216.8"	"243.3"	""	"780"	"42"	"35.000"	"28.000"	"0.00223390452084473"	"27"	"0"	"7.247E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8116"	"0.0000"	"1"	"1"	"1"	"800.47113"	"1599.93498"	"1599.93579"	"-0.51"	"-0.00040"	"9/96"	"9"	"96"	"4818033.97259521"	"HCD"	"MS2"	"0"	"317.3"	"100.000"	"101.5585"	"36197"	"36197"	"36180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"506.3"	""	"427.3"	""	"466.6"	""	"443.6"	""	"530.3"	"630.3"	""	"778"	"69"	"35.000"	"28.000"	"5.45694531074602E-06"	""	"0"	"3.67E-07"	"1.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"800.47119"	"1599.93511"	"1599.93579"	"-0.43"	"-0.00034"	"15/96"	"15"	"96"	"3325990.72741699"	"HCD"	"MS2"	"35.51295"	"215.4"	"100.000"	"101.2725"	"36081"	"36081"	"36067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"342.3"	""	"312.9"	""	"291.5"	""	"342.0"	""	"358.2"	"396.7"	""	"778"	"53"	"35.000"	"28.000"	"0.000216745256334521"	"26"	"0"	"1.456E-06"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"533.98322"	"1599.93509"	"1599.93579"	"-0.44"	"-0.00023"	"13/96"	"13"	"96"	"6724595.34014893"	"HCD"	"MS2"	"5.207639"	"111.3"	"66.008"	"101.5629"	"36198"	"36198"	"36180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"170.4"	""	"151.9"	""	"155.8"	""	"152.5"	""	"197.6"	"227.0"	""	"778"	"51"	"35.000"	"28.000"	"0.00028970073784943"	"28"	"0"	"1.285E-05"	"0.837"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"800.47131"	"1599.93535"	"1599.93579"	"-0.28"	"-0.00022"	"10/96"	"10"	"96"	"268949.90637207"	"HCD"	"MS2"	"20.20853"	"21.4"	"100.000"	"101.8809"	"36327"	"36327"	"36308"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.8"	""	"29.7"	""	"29.5"	""	"26.7"	""	"40.0"	"41.7"	""	"788"	"30"	"35.000"	"28.000"	"0.0404106858943055"	"19"	"0.0001686"	"0.001568"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.6829"	"0.0000"	"1"	"1"	"1"	"533.98340"	"1599.93564"	"1599.93579"	"-0.09"	"-0.00005"	"12/96"	"12"	"96"	"3003370.99243164"	"HCD"	"MS2"	"19.7334"	"77.6"	"100.000"	"101.4152"	"36164"	"36164"	"36146"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.9"	""	"108.6"	""	"99.6"	""	"125.2"	"0.1"	"130.3"	"132.9"	""	"788"	"41"	"35.000"	"28.000"	"0.00323218508465949"	"28"	"0"	"0.0001099"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.5526"	"0.0000"	"1"	"1"	"1"	"533.98340"	"1599.93564"	"1599.93579"	"-0.09"	"-0.00005"	"12/96"	"12"	"96"	"2747519.30877686"	"HCD"	"MS2"	"23.20382"	"68.7"	"100.000"	"101.2470"	"36070"	"36070"	"36052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.2"	""	"110.3"	""	"93.0"	""	"100.8"	""	"111.6"	"125.9"	""	"788"	"38"	"35.000"	"28.000"	"0.00638993178359419"	""	"0"	"0.0001039"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"800.47150"	"1599.93572"	"1599.93579"	"-0.05"	"-0.00004"	"15/96"	"15"	"96"	"2969366.95776367"	"HCD"	"MS2"	"32.71285"	"197.1"	"100.000"	"101.4316"	"36171"	"36171"	"36162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"332.8"	""	"281.5"	""	"247.9"	""	"306.9"	""	"332.2"	"366.6"	""	"788"	"56"	"35.000"	"28.000"	"9.76104290707515E-05"	"26"	"0"	"2.729E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"800.47168"	"1599.93608"	"1599.93579"	"0.18"	"0.00014"	"12/96"	"12"	"96"	"334741.374145508"	"HCD"	"MS2"	"16.18618"	"23.6"	"100.000"	"102.0060"	"36402"	"36402"	"36382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.7"	""	"29.8"	""	"33.8"	""	"33.1"	""	"38.1"	"51.4"	""	"786"	"44"	"35.000"	"28.000"	"0.00166108765406382"	"24"	"0"	"8.503E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDLGIEIPAEK"	"[R].gDLGIEIPAEk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2;Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P12928; P11980"	"Pyruvate kinase PKLR OS=Rattus norvegicus OX=10116 GN=Pklr PE=1 SV=2; Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.0833"	"0.0000"	"1"	"1"	"1"	"800.47229"	"1599.93730"	"1599.93579"	"0.94"	"0.00075"	"4/96"	"4"	"96"	"79214.9339599609"	"HCD"	"MS2"	"26.18549"	"5.7"	"100.000"	"102.1993"	"36457"	"36457"	"36430"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"9.2"	""	"8.1"	""	"10.6"	""	"7.0"	"9.8"	""	"769"	"12"	"35.000"	"28.000"	"2.71579099614109"	"24"	"0.00981"	"0.1328"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EALPDGVNISK"	"[].eALPDGVNISk.[]"	"N-Term(TMT6plex); K11(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"4"	"800.96881"	"1600.93035"	"1600.93104"	"-0.44"	"-0.00035"	"3/104"	"3"	"104"	"65934.9998779297"	"HCD"	"MS2"	"17.90486"	"3.9"	"100.000"	"87.9592"	"30737"	"30737"	"30710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.9"	""	"4.6"	""	"7.1"	""	"6.8"	""	"5.4"	"9.4"	""	"821"	"8"	"36.000"	"29.000"	"6.50598655505287"	"13"	"0.003818"	"0.04165"	"0.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYTEDGQTK"	"[R].tTYTEDGQTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"P50123"	"Glutamyl aminopeptidase OS=Rattus norvegicus OX=10116 GN=Enpep PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"801.42407"	"1601.84087"	"1601.84229"	"-0.89"	"-0.00071"	"6/92"	"6"	"92"	"110566.323791504"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"35.1557"	"9336"	"9336"	"9317"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"7.3"	""	"11.4"	""	"14.3"	""	"22.2"	"18.4"	""	"887"	"13"	"36.000"	"29.000"	"2.29558629970077"	"14"	"0.008893"	"0.1133"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVTNDPGIITWR"	"[R].tVTNDPGIITWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WU06"	"Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=1"	"Q9WU06"	"Advillin OS=Rattus norvegicus OX=10116 GN=Avil PE=2 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"801.44666"	"1601.88603"	"1601.88487"	"0.73"	"0.00058"	"3/122"	"3"	"122"	"79189.6864013672"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"95.4935"	"33773"	"33773"	"33751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"7.0"	""	"8.8"	""	"12.5"	""	"11.0"	"15.8"	""	"988"	"13"	"36.000"	"29.000"	"2.72099002024269"	"15"	"0.004819"	"0.05687"	"0.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVPVDVVEMK"	"[K].qVPVDVVEMk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.47040"	"1601.93352"	"1601.93369"	"-0.10"	"-0.00008"	"6/96"	"6"	"96"	"171942.344116211"	"HCD"	"MS2"	"25.46217"	"11.2"	"100.000"	"98.1992"	"34866"	"34866"	"34853"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.4"	""	"12.1"	""	"12.6"	""	"18.3"	""	"24.3"	"24.8"	""	"814"	"14"	"36.000"	"29.000"	"1.81800222005442"	"13"	"0.004213"	"0.04693"	"0.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVPVDVVEMK"	"[K].qVPVDVVEMk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"Q4G061"	"Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.47168"	"1601.93608"	"1601.93369"	"1.50"	"0.00120"	"9/96"	"9"	"96"	"124685.065002441"	"HCD"	"MS2"	"32.32663"	"8.4"	"100.000"	"98.1390"	"34811"	"34811"	"34788"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"9.5"	""	"8.8"	""	"11.6"	""	"16.7"	"22.8"	""	"835"	"26"	"36.000"	"29.000"	"0.0938980297936439"	"14"	"0.002035"	"0.01804"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVPETTELLK"	"[K].gGVPETTELLk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"801.47839"	"1601.94951"	"1601.95144"	"-1.21"	"-0.00097"	"8/86"	"8"	"86"	"167757.278991699"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"88.8384"	"31054"	"31054"	"31025"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"19.6"	""	"18.2"	""	"23.2"	""	"21.6"	"44.2"	""	"727"	"50"	"35.000"	"28.000"	"0.000338457712732556"	"24"	"0.0001686"	"0.001194"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVPETTELLK"	"[K].gGVPETTELLk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"801.47919"	"1601.95110"	"1601.95144"	"-0.22"	"-0.00017"	"13/86"	"13"	"86"	"360089.624389648"	"HCD"	"MS2"	"5.496657"	"28.5"	"100.000"	"89.1225"	"31169"	"31169"	"31160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.3"	""	"37.4"	""	"30.1"	""	"36.4"	"1.7"	"44.8"	"73.8"	""	"725"	"44"	"35.000"	"28.000"	"0.00150420840454956"	"23"	"0.0001686"	"0.001266"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVPETTELLK"	"[K].gGVPETTELLk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8704"	"0.0000"	"1"	"1"	"1"	"801.47943"	"1601.95159"	"1601.95144"	"0.09"	"0.00007"	"8/86"	"8"	"86"	"361380.787414551"	"HCD"	"MS2"	"8.008894"	"30.1"	"100.000"	"89.0219"	"31167"	"31167"	"31156"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"31.2"	""	"34.5"	""	"46.7"	""	"44.7"	"84.4"	""	"726"	"54"	"35.000"	"28.000"	"0.000156281159608491"	"23"	"9.9E-05"	"0.0004215"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGVPETTELLK"	"[K].gGVPETTELLk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"P11883"	"Aldehyde dehydrogenase, dimeric NADP-preferring OS=Rattus norvegicus OX=10116 GN=Aldh3a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"801.47980"	"1601.95232"	"1601.95144"	"0.55"	"0.00044"	"5/86"	"5"	"86"	"199167.614990234"	"HCD"	"MS2"	"16.29235"	"15.6"	"100.000"	"88.7333"	"31051"	"31051"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.4"	""	"19.5"	""	"16.1"	""	"23.4"	""	"28.5"	"38.5"	""	"720"	"17"	"35.000"	"28.000"	"0.757360238315931"	"18"	"0.006305"	"0.07834"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"801.90436"	"1602.80144"	"1602.80351"	"-1.29"	"-0.00104"	"5/116"	"5"	"116"	"131971.44708252"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"100.2154"	"35652"	"35652"	"35634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"16.9"	""	"13.7"	""	"17.8"	""	"17.6"	"13.0"	""	"689"	"21"	"35.000"	"28.000"	"0.285883589408719"	"17"	"0.002525"	"0.02373"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"801.90540"	"1602.80351"	"1602.80351"	"0.00"	"0.00000"	"4/116"	"4"	"116"	"223500.47833252"	"HCD"	"MS2"	"9.903267"	"13.5"	"100.000"	"100.5686"	"35796"	"35796"	"35771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"15.6"	""	"18.9"	""	"24.9"	""	"29.5"	"19.8"	""	"695"	"15"	"35.000"	"28.000"	"1.15333323999532"	"22"	"0.004819"	"0.05889"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"801.90558"	"1602.80388"	"1602.80351"	"0.23"	"0.00019"	"6/116"	"6"	"116"	"157627.40802002"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"100.3389"	"35730"	"35730"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"13.4"	""	"11.1"	""	"17.1"	""	"17.1"	"15.8"	""	"708"	"38"	"35.000"	"28.000"	"0.00605345421541962"	"22"	"0.001348"	"0.0106"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"801.90582"	"1602.80437"	"1602.80351"	"0.54"	"0.00043"	"8/116"	"8"	"116"	"223757.52923584"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"100.8476"	"35909"	"35909"	"35895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"17.7"	""	"16.9"	""	"22.9"	""	"27.3"	"17.4"	""	"708"	"55"	"35.000"	"28.000"	"0.000116145733762044"	"26"	"0.0001686"	"0.001762"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"801.90607"	"1602.80486"	"1602.80351"	"0.84"	"0.00067"	"8/116"	"8"	"116"	"197771.927429199"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"100.7108"	"35881"	"35881"	"35862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"15.9"	""	"15.0"	""	"17.3"	""	"29.3"	"21.1"	""	"704"	"70"	"35.000"	"28.000"	"3.94950495914291E-06"	"26"	"0"	"0.000345"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"801.90619"	"1602.80510"	"1602.80351"	"0.99"	"0.00080"	"6/116"	"6"	"116"	"165455.818786621"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"101.0223"	"36007"	"36007"	"35988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"18.3"	""	"13.3"	""	"16.9"	""	"18.0"	"15.0"	""	"702"	"23"	"35.000"	"28.000"	"0.170336263556904"	"21"	"0.002189"	"0.02126"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"801.90643"	"1602.80559"	"1602.80351"	"1.30"	"0.00104"	"7/116"	"7"	"116"	"255385.25604248"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"99.9225"	"35533"	"35533"	"35508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"23.9"	""	"20.5"	""	"30.6"	""	"30.4"	"21.5"	""	"708"	"49"	"35.000"	"28.000"	"0.000422671788980353"	"21"	"0.0001991"	"0.002534"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVMGDFAQFVDK"	"[K].TVmGDFAQFVDk.[C]"	"M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"801.90753"	"1602.80779"	"1602.80351"	"2.67"	"0.00214"	"6/116"	"6"	"116"	"224898.122009277"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"100.0045"	"35594"	"35594"	"35570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"19.9"	""	"21.9"	""	"24.1"	""	"18.4"	"23.1"	""	"718"	"36"	"35.000"	"28.000"	"0.00841578144699853"	"23"	"0.001261"	"0.01017"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDGIVPDIAVGTK"	"[-].mDGIVPDIAVGTk.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9872"	"0.0000"	"1"	"1"	"1"	"801.93433"	"1602.86138"	"1602.86103"	"0.22"	"0.00018"	"9/116"	"9"	"116"	"656061.45501709"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"111.7493"	"40218"	"40218"	"40199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"23.3"	""	"23.5"	""	"56.3"	""	"40.7"	"27.9"	""	"1046"	"78"	"37.000"	"30.000"	"7.71794516903292E-07"	"18"	"0"	"1.483E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGPDNGQGPK"	"[K].fQGPDNGQGPk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.93463"	"1602.86199"	"1602.86403"	"-1.27"	"-0.00102"	"8/98"	"8"	"98"	"140372.880004883"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"45.9184"	"13667"	"13667"	"13637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"14.8"	""	"15.5"	""	"14.8"	"1.9"	"24.8"	"22.3"	""	"1052"	"6"	"37.000"	"30.000"	"12.0222497057548"	"13"	"0.003529"	"0.03875"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDGIVPDIAVGTK"	"[-].mDGIVPDIAVGTk.[R]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"Q00438"	"Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.93481"	"1602.86235"	"1602.86103"	"0.83"	"0.00066"	"11/116"	"11"	"116"	"486917.712280273"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"111.8326"	"40266"	"40266"	"40236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"20.0"	""	"14.0"	""	"43.9"	""	"25.1"	"25.0"	""	"1052"	"49"	"37.000"	"30.000"	"0.000648613142278406"	"16"	"0"	"0.0002164"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGPDNGQGPK"	"[K].fQGPDNGQGPk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"801.93579"	"1602.86431"	"1602.86403"	"0.17"	"0.00014"	"7/98"	"7"	"98"	"186634.214782715"	"HCD"	"MS2"	"100"	"19.6"	"100.000"	"45.6388"	"13587"	"13587"	"13560"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"18.5"	""	"22.6"	""	"33.4"	""	"37.9"	"42.8"	""	"1058"	"9"	"37.000"	"30.000"	"6.43362394341928"	"13"	"0.002035"	"0.01782"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPSNLGSSVLASKTK"	"[M].aTPSNLGSSVLASKTK.[T]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9R0I8"	"Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus OX=10116 GN=Pip4k2a PE=1 SV=1"	"Q9R0I8"	"Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus OX=10116 GN=Pip4k2a PE=1 SV=1"	"1"	"2"	"2"	"0.1290"	"0.0000"	"1"	"1"	"1"	"801.94971"	"1602.89214"	"1602.86973"	"13.98"	"0.01121"	"9/168"	"9"	"168"	"379105.037841797"	"HCD"	"MS2"	"11.23241"	"22.4"	"100.000"	"103.4937"	"36993"	"36993"	"36972"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.6"	""	"28.2"	""	"27.9"	""	"39.2"	"0.9"	"40.5"	"45.1"	"NoQuanLabels"	"1005"	"62"	"37.000"	"30.000"	"3.12705893297502E-05"	""	"0.002588"	"0.02707"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"ATPSNLGSSVLASK"	"[M].aTPSNLGSSVLASk.[T]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"Q9R0I8"	"Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus OX=10116 GN=Pip4k2a PE=1 SV=1"	"Q9R0I8"	"Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha OS=Rattus norvegicus OX=10116 GN=Pip4k2a PE=1 SV=1"	"0"	"2"	"2"	"0.0175"	"0.0000"	"1"	"1"	"1"	"801.94989"	"1602.89250"	"1602.89002"	"1.55"	"0.00124"	"8/144"	"8"	"144"	"565746.993225098"	"HCD"	"MS2"	"18.18674"	"30.4"	"100.000"	"103.3153"	"36904"	"36904"	"36883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"39.6"	""	"33.8"	""	"46.1"	"1.2"	"54.2"	"65.6"	""	"1004"	"57"	"37.000"	"30.000"	"9.90156213529657E-05"	"22"	"0.0001991"	"0.005034"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVNNGTVLPK"	"[R].tTVnNGTVLPk.[K]"	"N-Term(TMT6plex); N4(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.2131"	"0.0000"	"1"	"1"	"1"	"801.97644"	"1602.94560"	"1602.94669"	"-0.68"	"-0.00054"	"9/106"	"9"	"106"	"140170.428588867"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"65.8215"	"21778"	"21778"	"21757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.0"	""	"14.3"	""	"10.2"	""	"23.5"	"2.3"	"24.6"	"19.9"	""	"815"	"61"	"36.000"	"29.000"	"2.9250117369308E-05"	""	"0"	"1.068E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVNNGTVLPK"	"[R].tTVNnGTVLPk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"801.97693"	"1602.94658"	"1602.94669"	"-0.07"	"-0.00006"	"5/106"	"5"	"106"	"200316.192932129"	"HCD"	"MS2"	"0"	"17.7"	"100.000"	"66.1416"	"21909"	"21909"	"21878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"19.9"	""	"22.5"	""	"36.0"	""	"34.5"	"34.5"	""	"820"	"12"	"36.000"	"29.000"	"2.41982442870456"	"13"	"0.0001991"	"0.004958"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTVNNGTVLPK"	"[R].tTVNnGTVLPk.[K]"	"N-Term(TMT6plex); N5(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.2727"	"0.0000"	"1"	"1"	"1"	"801.97736"	"1602.94744"	"1602.94669"	"0.46"	"0.00037"	"10/106"	"10"	"106"	"146572.958740234"	"HCD"	"MS2"	"100"	"13.0"	"100.000"	"65.8295"	"21748"	"21748"	"21723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"14.9"	""	"16.1"	""	"24.4"	""	"27.4"	"24.3"	""	"780"	"22"	"35.000"	"28.000"	"0.234457757618478"	"18"	"0.0001686"	"0.001918"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEYFPGTGDLR"	"[K].yGEYFPGTGDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"802.40137"	"1603.79546"	"1603.79539"	"0.04"	"0.00003"	"7/102"	"7"	"102"	"683805.466369629"	"HCD"	"MS2"	"0"	"40.3"	"100.000"	"97.0335"	"34363"	"34363"	"34349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.2"	""	"47.0"	""	"44.0"	""	"61.8"	"0.8"	"83.9"	"78.7"	""	"633"	"38"	"35.000"	"28.000"	"0.00535024554865093"	"18"	"9.9E-05"	"0.0004939"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEYFPGTGDLR"	"[K].yGEYFPGTGDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"802.40137"	"1603.79546"	"1603.79539"	"0.04"	"0.00003"	"6/102"	"6"	"102"	"332616.219299316"	"HCD"	"MS2"	"15.58528"	"20.3"	"100.000"	"96.7379"	"34244"	"34244"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"24.0"	""	"20.5"	""	"36.7"	""	"39.0"	"40.2"	""	"633"	"27"	"35.000"	"28.000"	"0.0641761580728486"	"15"	"0.0001686"	"0.001616"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEYFPGTGDLR"	"[K].yGEYFPGTGDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.40143"	"1603.79558"	"1603.79539"	"0.12"	"0.00010"	"6/102"	"6"	"102"	"326576.33581543"	"HCD"	"MS2"	"17.82756"	"21.2"	"100.000"	"96.8074"	"34303"	"34303"	"34279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.2"	""	"26.9"	""	"28.1"	""	"29.1"	""	"43.7"	"38.5"	""	"633"	"26"	"35.000"	"28.000"	"0.0755742271042021"	"14"	"9.9E-05"	"0.000969"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEYFPGTGDLR"	"[K].yGEYFPGTGDLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"802.40179"	"1603.79631"	"1603.79539"	"0.58"	"0.00046"	"15/102"	"15"	"102"	"782107.887756348"	"HCD"	"MS2"	"2.622916"	"41.7"	"100.000"	"97.0894"	"34417"	"34417"	"34404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.4"	""	"54.6"	""	"46.5"	""	"61.6"	""	"78.9"	"88.8"	""	"649"	"49"	"35.000"	"28.000"	"0.000414204393459281"	"18"	"0"	"0.0003168"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"DFLPVDPASSNGR"	"[K].dFLPVDPASSNGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"Q64604"	"Receptor-type tyrosine-protein phosphatase F OS=Rattus norvegicus OX=10116 GN=Ptprf PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"802.41760"	"1603.82793"	"1603.82775"	"0.11"	"0.00009"	"4/118"	"4"	"118"	"195471.611328125"	"HCD"	"MS2"	"48.2542"	"10.4"	"100.000"	"90.5852"	"31755"	"31755"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"13.7"	""	"16.1"	""	"15.8"	""	"19.4"	"20.4"	""	"891"	"1"	"36.000"	"29.000"	"39.6139098005716"	"13"	"0.004213"	"0.04597"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"DFLPVDPSASNGR"	"[].dFLPVDPSASNGR.[]"	"N-Term(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"3"	"3"	"3"	"802.41760"	"1603.82793"	"1603.82775"	"0.11"	"0.00009"	"4/118"	"4"	"118"	"195471.611328125"	"HCD"	"MS2"	"48.2542"	"10.4"	"100.000"	"90.5852"	"31755"	"31755"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"13.7"	""	"16.1"	""	"15.8"	""	"19.4"	"20.4"	""	"891"	"1"	"36.000"	"29.000"	"39.6139098005716"	"13"	"0.004213"	"0.04597"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tENGGWTVIQNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"802.42072"	"1603.83415"	"1603.83898"	"-3.01"	"-0.00242"	"11/118"	"11"	"118"	"889670.186645508"	"HCD"	"MS2"	"31.42024"	"74.4"	"100.000"	"63.8050"	"20926"	"20926"	"20908"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.9"	""	"97.5"	""	"106.8"	""	"118.3"	"1.2"	"129.4"	"114.0"	""	"960"	"36"	"36.000"	"29.000"	"0.0132202977760232"	"21"	"0"	"3.709E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tENGGWTVIQNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.28412"	"1603.83780"	"1603.83898"	"-0.74"	"-0.00039"	"12/118"	"12"	"118"	"1312991.37445068"	"HCD"	"MS2"	"82.04692"	"40.7"	"100.000"	"63.8518"	"20977"	"20977"	"20958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.5"	""	"49.9"	""	"59.0"	""	"64.9"	""	"69.8"	"72.5"	""	"1004"	"9"	"37.000"	"30.000"	"6.5872434930764"	"13"	"0"	"0.0003816"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGPDNGQGPK"	"[K].fQGPDnGQGPk.[Y]"	"N-Term(TMT6plex); N6(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"802.42523"	"1603.84319"	"1603.84804"	"-3.03"	"-0.00243"	"9/98"	"9"	"98"	"116245.782409668"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"49.6784"	"15223"	"15223"	"15200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"13.4"	""	"16.2"	""	"18.2"	""	"22.4"	"19.3"	""	"1051"	"19"	"37.000"	"30.000"	"0.686392801713283"	"17"	"0.003317"	"0.03671"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQGPDNGQGPK"	"[K].fQGPDnGQGPk.[Y]"	"N-Term(TMT6plex); N6(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"2"	"2"	"0.1818"	"0.0000"	"1"	"1"	"1"	"802.42670"	"1603.84612"	"1603.84804"	"-1.20"	"-0.00096"	"4/98"	"4"	"98"	"99763.8840332031"	"HCD"	"MS2"	"100"	"8.1"	"100.000"	"50.0087"	"15323"	"15323"	"15292"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"8.7"	""	"7.9"	""	"16.4"	""	"14.9"	"17.8"	""	"1038"	"11"	"37.000"	"30.000"	"4.1992077167358"	"19"	"0.002588"	"0.02651"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRELFEADPER"	"[K].lRELFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"1"	"3"	"3"	"0.7576"	"0.0000"	"1"	"1"	"1"	"535.29272"	"1603.86362"	"1603.86414"	"-0.32"	"-0.00017"	"9/112"	"9"	"112"	"1177760.83300781"	"HCD"	"MS2"	"4.212577"	"27.6"	"100.000"	"86.1610"	"29982"	"29982"	"29972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.7"	""	"48.4"	""	"42.3"	""	"33.9"	""	"31.4"	"38.3"	""	"1103"	"33"	"37.000"	"30.000"	"0.0286118221469322"	"23"	"0"	"6.751E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LRELFEADPER"	"[K].lRELFEADPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"1"	"3"	"3"	"0.3636"	"0.0000"	"1"	"1"	"1"	"535.29291"	"1603.86417"	"1603.86414"	"0.02"	"0.00001"	"11/112"	"11"	"112"	"922219.489013672"	"HCD"	"MS2"	"6.172085"	"21.9"	"100.000"	"86.1513"	"30009"	"30009"	"29995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"37.1"	""	"34.3"	""	"26.1"	""	"26.0"	"31.9"	""	"1095"	"11"	"37.000"	"30.000"	"4.44001179174978"	"20"	"0.0001991"	"0.003384"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTLGESQGYK"	"[K].yTLGESQGYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"535.29559"	"1603.87223"	"1603.87319"	"-0.60"	"-0.00032"	"7/86"	"7"	"86"	"1703846.19512939"	"HCD"	"MS2"	"54.99373"	"46.1"	"100.000"	"63.7798"	"20916"	"20916"	"20894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.1"	""	"71.6"	""	"54.6"	""	"73.2"	"0.5"	"84.1"	"71.4"	""	"1099"	"18"	"37.000"	"30.000"	"0.849117314526358"	"20"	"0.001049"	"0.008734"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTLGESQGYK"	"[K].yTLGESQGYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"535.29590"	"1603.87314"	"1603.87319"	"-0.03"	"-0.00002"	"9/86"	"9"	"86"	"1025426.64324951"	"HCD"	"MS2"	"59.68725"	"41.0"	"100.000"	"63.9847"	"21031"	"21031"	"21009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"49.3"	""	"52.2"	""	"60.0"	"0.5"	"84.3"	"81.1"	""	"1102"	"19"	"37.000"	"30.000"	"0.668577256606202"	"14"	"0.0001686"	"0.00195"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTLGESQGYK"	"[K].yTLGESQGYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"802.44165"	"1603.87602"	"1603.87319"	"1.76"	"0.00142"	"12/86"	"12"	"86"	"457182.766296387"	"HCD"	"MS2"	"17.96391"	"48.3"	"100.000"	"63.6124"	"20848"	"20848"	"20821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.5"	""	"59.1"	""	"62.4"	""	"73.9"	""	"87.4"	"86.8"	""	"1111"	"33"	"37.000"	"30.000"	"0.0288193421625038"	"21"	"0"	"0.0001694"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YTLGESQGYK"	"[K].yTLGESQGYk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"802.44196"	"1603.87663"	"1603.87319"	"2.15"	"0.00172"	"7/86"	"7"	"86"	"506991.756713867"	"HCD"	"MS2"	"41.15831"	"47.1"	"100.000"	"63.9160"	"21003"	"21003"	"20979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.4"	""	"67.9"	""	"65.7"	""	"66.9"	"0.4"	"80.9"	"75.8"	""	"1110"	"29"	"37.000"	"30.000"	"0.0750400272572824"	"17"	"0"	"5.296E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5217"	"0.0000"	"1"	"1"	"1"	"802.44458"	"1603.88188"	"1603.88443"	"-1.59"	"-0.00127"	"6/86"	"6"	"86"	"299517.720214844"	"HCD"	"MS2"	"38.5593"	"30.1"	"100.000"	"82.1023"	"28347"	"28347"	"28327"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.2"	""	"29.5"	""	"30.6"	""	"63.7"	"0.3"	"61.4"	"60.0"	""	"1097"	"23"	"37.000"	"30.000"	"0.284561821352535"	"25"	"0.0001991"	"0.003301"	"0.341"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.5625"	"0.0000"	"1"	"1"	"1"	"802.44495"	"1603.88262"	"1603.88443"	"-1.13"	"-0.00091"	"8/86"	"8"	"86"	"134131.977722168"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"82.8345"	"28640"	"28640"	"28615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"11.3"	""	"17.7"	""	"22.7"	"1.0"	"25.8"	"29.3"	""	"1098"	"16"	"37.000"	"30.000"	"1.30188416440825"	"20"	"0.008926"	"0.1162"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"535.29926"	"1603.88321"	"1603.88443"	"-0.76"	"-0.00040"	"11/86"	"11"	"86"	"1682077.77142334"	"HCD"	"MS2"	"5.122478"	"49.2"	"100.000"	"82.2432"	"28404"	"28404"	"28384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.0"	""	"51.9"	""	"50.4"	""	"94.6"	""	"101.7"	"95.5"	""	"1112"	"29"	"37.000"	"30.000"	"0.0760457227031291"	"24"	"0.0001991"	"0.003925"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"535.29932"	"1603.88340"	"1603.88443"	"-0.64"	"-0.00034"	"5/86"	"5"	"86"	"1853865.42675781"	"HCD"	"MS2"	"5.333851"	"55.3"	"100.000"	"82.5516"	"28525"	"28525"	"28507"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.7"	""	"48.5"	""	"57.5"	""	"109.3"	""	"109.1"	"127.5"	""	"1112"	"29"	"37.000"	"30.000"	"0.0669999982846719"	"26"	"0.0001991"	"0.003439"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"802.44537"	"1603.88347"	"1603.88443"	"-0.60"	"-0.00048"	"13/86"	"13"	"86"	"320046.777648926"	"HCD"	"MS2"	"0"	"28.9"	"100.000"	"82.7873"	"28649"	"28649"	"28630"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.4"	""	"27.1"	""	"33.7"	""	"51.9"	"2.1"	"54.4"	"68.7"	""	"1108"	"34"	"37.000"	"30.000"	"0.0232011635075327"	"19"	"0"	"0.0003144"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7451"	"0.0000"	"1"	"1"	"1"	"802.44550"	"1603.88371"	"1603.88443"	"-0.44"	"-0.00036"	"16/86"	"16"	"86"	"1419844.49664307"	"HCD"	"MS2"	"4.327191"	"123.7"	"100.000"	"82.3883"	"28464"	"28464"	"28447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"189.1"	""	"114.1"	""	"116.7"	""	"232.4"	""	"256.4"	"266.2"	""	"1116"	"51"	"37.000"	"30.000"	"0.000491625271138472"	"29"	"0"	"5.66E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.3871"	"0.0000"	"1"	"1"	"1"	"535.29950"	"1603.88395"	"1603.88443"	"-0.30"	"-0.00016"	"10/86"	"10"	"86"	"2022345.00146484"	"HCD"	"MS2"	"3.77993"	"57.5"	"100.000"	"82.5946"	"28571"	"28571"	"28553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.8"	""	"45.8"	""	"66.7"	""	"116.0"	""	"122.3"	"118.4"	""	"1115"	"31"	"37.000"	"30.000"	"0.0420963916923479"	""	"0.0001991"	"0.002206"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"802.44562"	"1603.88396"	"1603.88443"	"-0.29"	"-0.00023"	"12/86"	"12"	"86"	"470272.182312012"	"HCD"	"MS2"	"52.83442"	"44.4"	"100.000"	"82.7317"	"28627"	"28627"	"28601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.7"	""	"49.1"	""	"46.2"	""	"79.9"	""	"89.8"	"93.9"	""	"1115"	"12"	"37.000"	"30.000"	"3.8040382198398"	"17"	"0.0007633"	"0.007346"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"802.44568"	"1603.88408"	"1603.88443"	"-0.22"	"-0.00017"	"6/86"	"6"	"86"	"279292.473571777"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"82.1827"	"28408"	"28408"	"28382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.8"	""	"26.0"	""	"25.3"	""	"59.0"	""	"54.1"	"50.7"	""	"1115"	"38"	"37.000"	"30.000"	"0.00877495446939917"	"24"	"0"	"9.28E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.4643"	"0.0000"	"1"	"1"	"1"	"535.29968"	"1603.88449"	"1603.88443"	"0.04"	"0.00002"	"11/86"	"11"	"86"	"1657174.22277832"	"HCD"	"MS2"	"13.6363"	"49.9"	"100.000"	"82.2796"	"28447"	"28447"	"28428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"54.4"	""	"49.5"	""	"102.6"	""	"99.0"	"98.6"	""	"1113"	"28"	"37.000"	"30.000"	"0.0967086161199027"	"29"	"0.0001991"	"0.002359"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQWIDNVEK"	"[K].nQWIDNVEk.[M]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7115"	"0.0000"	"1"	"1"	"1"	"802.44598"	"1603.88469"	"1603.88443"	"0.16"	"0.00013"	"8/86"	"8"	"86"	"1337145.3762207"	"HCD"	"MS2"	"9.509544"	"122.8"	"100.000"	"82.4718"	"28522"	"28522"	"28505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.0"	""	"115.0"	""	"110.6"	""	"248.4"	"0.8"	"260.6"	"263.8"	""	"1147"	"52"	"37.000"	"30.000"	"0.000387733586387301"	""	"0"	"7.735E-05"	"0.677"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VEVEEDGQLK"	"[].vEVEEDGQLk.[]"	"N-Term(TMT6plex); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"802.44977"	"1603.89226"	"1603.89432"	"-1.29"	"-0.00103"	"6/84"	"6"	"84"	"116797.382446289"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"65.4598"	"21631"	"21631"	"21600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"12.5"	""	"9.0"	""	"16.4"	""	"17.2"	"17.2"	""	"1108"	"4"	"37.000"	"30.000"	"24.5759188738014"	"16"	"0.009846"	"0.1331"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.3548"	"0.0000"	"1"	"1"	"1"	"802.45001"	"1603.89275"	"1603.89432"	"-0.98"	"-0.00079"	"7/86"	"7"	"86"	"132245.043579102"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"84.7199"	"29402"	"29402"	"29389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"20.4"	""	"17.1"	""	"22.1"	""	"18.1"	"16.0"	""	"1106"	"31"	"37.000"	"30.000"	"0.0461025695094658"	""	"0.0001991"	"0.002052"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.5532"	"0.0000"	"1"	"1"	"1"	"802.45093"	"1603.89458"	"1603.89432"	"0.16"	"0.00013"	"8/86"	"8"	"86"	"185473.89465332"	"HCD"	"MS2"	"9.869741"	"18.6"	"100.000"	"84.7930"	"29460"	"29460"	"29445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.2"	""	"28.9"	""	"31.2"	""	"24.0"	""	"27.0"	"23.1"	""	"1107"	"47"	"37.000"	"30.000"	"0.00113793544487722"	""	"0"	"0.0001137"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6591"	"0.0000"	"1"	"1"	"1"	"802.45093"	"1603.89458"	"1603.89432"	"0.16"	"0.00013"	"14/86"	"14"	"86"	"353373.712890625"	"HCD"	"MS2"	"5.470116"	"30.5"	"100.000"	"85.0906"	"29580"	"29580"	"29561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.7"	""	"45.8"	""	"46.8"	""	"40.2"	""	"47.6"	"44.0"	""	"1107"	"44"	"37.000"	"30.000"	"0.00238296478907162"	"30"	"0"	"6.016E-06"	"0.905"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"802.45142"	"1603.89556"	"1603.89432"	"0.77"	"0.00062"	"10/86"	"10"	"86"	"307092.226196289"	"HCD"	"MS2"	"47.27079"	"26.4"	"100.000"	"84.9661"	"29530"	"29530"	"29499"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"40.9"	""	"41.5"	""	"39.2"	"0.7"	"40.8"	"45.4"	""	"1101"	"19"	"37.000"	"30.000"	"0.75641010724439"	"18"	"0.004751"	"0.05602"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEDVEALDQK"	"[R].vEDVEALDQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"802.45190"	"1603.89653"	"1603.89432"	"1.38"	"0.00110"	"13/86"	"13"	"86"	"351441.532104492"	"HCD"	"MS2"	"11.32561"	"29.8"	"100.000"	"85.0826"	"29547"	"29547"	"29527"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.6"	""	"44.8"	""	"40.4"	""	"35.3"	""	"46.9"	"46.6"	""	"1080"	"44"	"37.000"	"30.000"	"0.00236261936785456"	"29"	"0"	"5.877E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.91394"	"1604.82060"	"1604.82300"	"-1.49"	"-0.00120"	"5/118"	"5"	"118"	"126843.618591309"	"HCD"	"MS2"	"17.97726"	"10.3"	"100.000"	"70.4513"	"23622"	"23622"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"12.9"	""	"9.2"	""	"20.2"	""	"19.8"	"23.1"	""	"959"	"14"	"36.000"	"29.000"	"1.71707241590714"	"13"	"0.003568"	"0.03966"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TENGGWTVIQNR"	"[K].tEnGGWTVIQNR.[Q]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"802.91437"	"1604.82146"	"1604.82300"	"-0.96"	"-0.00077"	"5/118"	"5"	"118"	"136423.738342285"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"70.5958"	"23714"	"23714"	"23689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"11.3"	""	"7.2"	""	"18.8"	""	"22.9"	"15.8"	""	"969"	"12"	"36.000"	"29.000"	"3.30593097311639"	"13"	"0.004073"	"0.04398"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQESADELQK"	"[R].vQESADELQk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"P84083"	"ADP-ribosylation factor 5 OS=Rattus norvegicus OX=10116 GN=Arf5 PE=1 SV=2"	"0"	"2"	"2"	"0.7317"	"0.0000"	"1"	"1"	"1"	"802.94769"	"1604.88811"	"1604.88957"	"-0.91"	"-0.00073"	"7/96"	"7"	"96"	"139473.98626709"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"53.9023"	"16940"	"16940"	"16910"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"12.8"	""	"16.8"	""	"16.8"	""	"21.9"	"17.6"	""	"1081"	"41"	"37.000"	"30.000"	"0.00416673325029324"	"26"	"0.0001991"	"0.002246"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEQYVELHK"	"[K].tEQYVELHk.[G]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"Q03555"	"Gephyrin OS=Rattus norvegicus OX=10116 GN=Gphn PE=1 SV=3"	"Q03555"	"Gephyrin OS=Rattus norvegicus OX=10116 GN=Gphn PE=1 SV=3"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"535.63953"	"1604.90403"	"1604.90483"	"-0.50"	"-0.00027"	"6/86"	"6"	"86"	"1652124.91400146"	"HCD"	"MS2"	"43.33907"	"70.5"	"100.000"	"52.6985"	"16449"	"16449"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.5"	""	"63.4"	""	"87.7"	""	"131.9"	"4.1"	"140.2"	"144.7"	""	"995"	"25"	"36.000"	"29.000"	"0.172104840468496"	"17"	"0.0001686"	"0.001266"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"535.64069"	"1604.90750"	"1604.90820"	"-0.43"	"-0.00023"	"5/82"	"5"	"82"	"2350822.86877441"	"HCD"	"MS2"	"12.56907"	"72.3"	"100.000"	"76.5840"	"26142"	"26142"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.0"	""	"78.8"	""	"92.9"	""	"89.1"	"0.0"	"151.4"	"140.3"	""	"1000"	"33"	"36.000"	"30.000"	"0.0271000445200812"	"29"	"0.0001686"	"0.001191"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"535.64087"	"1604.90805"	"1604.90820"	"-0.09"	"-0.00005"	"7/82"	"7"	"82"	"996579.896972656"	"HCD"	"MS2"	"16.53073"	"29.3"	"100.000"	"76.8944"	"26268"	"26268"	"26250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"33.3"	""	"44.9"	""	"39.8"	""	"62.4"	"55.2"	""	"971"	"9"	"36.000"	"29.000"	"5.54867431540434"	"20"	"0.00394"	"0.04317"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"535.64093"	"1604.90824"	"1604.90820"	"0.02"	"0.00001"	"9/82"	"9"	"82"	"2127297.52490234"	"HCD"	"MS2"	"10.91235"	"62.8"	"100.000"	"76.4727"	"26065"	"26065"	"26047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.5"	""	"76.6"	""	"77.0"	""	"71.6"	""	"122.6"	"133.4"	""	"973"	"24"	"36.000"	"29.000"	"0.177452795179308"	"26"	"0.0009352"	"0.007884"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"802.95782"	"1604.90837"	"1604.90820"	"0.11"	"0.00009"	"5/82"	"5"	"82"	"374370.763061523"	"HCD"	"MS2"	"0"	"41.1"	"100.000"	"76.4411"	"26084"	"26084"	"26058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.7"	""	"55.3"	""	"49.6"	""	"45.2"	""	"74.3"	"75.0"	""	"973"	"28"	"36.000"	"29.000"	"0.0719586230843832"	"26"	"0.002189"	"0.02044"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"802.95782"	"1604.90837"	"1604.90820"	"0.11"	"0.00009"	"5/82"	"5"	"82"	"393015.784606934"	"HCD"	"MS2"	"0"	"39.7"	"100.000"	"76.3410"	"26012"	"26012"	"25984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.5"	""	"49.4"	""	"43.8"	""	"44.1"	"0.6"	"85.0"	"74.8"	""	"973"	"26"	"36.000"	"29.000"	"0.128257521920405"	"28"	"0.00329"	"0.03553"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.4074"	"0.0000"	"1"	"1"	"1"	"535.64111"	"1604.90879"	"1604.90820"	"0.37"	"0.00020"	"7/82"	"7"	"82"	"1016302.62469482"	"HCD"	"MS2"	"16.96119"	"37.7"	"100.000"	"76.7761"	"26189"	"26189"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"45.7"	""	"49.9"	""	"49.6"	""	"77.4"	"77.7"	""	"960"	"27"	"36.000"	"29.000"	"0.0875469937113425"	""	"0.0001991"	"0.004708"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"802.95819"	"1604.90911"	"1604.90820"	"0.56"	"0.00045"	"5/82"	"5"	"82"	"1521412.64526367"	"HCD"	"MS2"	"0"	"150.1"	"100.000"	"76.7474"	"26208"	"26208"	"26192"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"287.2"	""	"183.8"	""	"188.7"	""	"159.0"	"0.7"	"292.1"	"311.0"	""	"964"	"26"	"36.000"	"29.000"	"0.120794465996148"	"24"	"0.006384"	"0.07974"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"803.39471"	"1605.78215"	"1605.79045"	"-5.17"	"-0.00415"	"8/74"	"8"	"74"	"504153.570556641"	"HCD"	"MS2"	"32.54496"	"39.1"	"100.000"	"62.6873"	"20504"	"20504"	"20483"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.1"	""	"37.4"	""	"43.6"	""	"62.8"	""	"87.1"	"101.0"	""	"591"	"24"	"34.000"	"27.000"	"0.113908854690236"	"23"	"0.00455"	"0.05296"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"803.39728"	"1605.78728"	"1605.79045"	"-1.98"	"-0.00159"	"7/74"	"7"	"74"	"256459.875671387"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"64.1214"	"21053"	"21053"	"21043"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.7"	""	"29.2"	""	"32.0"	""	"44.7"	""	"49.8"	"49.8"	""	"669"	"23"	"35.000"	"28.000"	"0.169979333536507"	"20"	"0.002525"	"0.02434"	"0.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"803.39746"	"1605.78765"	"1605.79045"	"-1.75"	"-0.00140"	"11/74"	"11"	"74"	"261802.221374512"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"64.1038"	"21079"	"21079"	"21056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"27.7"	""	"32.1"	""	"45.7"	""	"40.9"	"43.2"	""	"669"	"30"	"35.000"	"28.000"	"0.036007761395918"	"21"	"0.001049"	"0.008648"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"803.39771"	"1605.78813"	"1605.79045"	"-1.44"	"-0.00116"	"7/74"	"7"	"74"	"248633.641845703"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"63.2716"	"20709"	"20709"	"20684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.6"	""	"27.0"	""	"25.7"	""	"38.2"	""	"42.6"	"46.9"	""	"671"	"33"	"35.000"	"28.000"	"0.0183946921730946"	"23"	"0.0005161"	"0.006815"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"803.39777"	"1605.78826"	"1605.79045"	"-1.37"	"-0.00110"	"10/74"	"10"	"74"	"225105.312011719"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"64.4089"	"21202"	"21202"	"21179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"22.1"	""	"31.8"	""	"34.9"	""	"48.6"	"55.3"	""	"670"	"13"	"35.000"	"28.000"	"1.857996138409"	"16"	"0.006305"	"0.0782"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"803.39832"	"1605.78935"	"1605.79045"	"-0.68"	"-0.00055"	"10/74"	"10"	"74"	"325860.882141113"	"HCD"	"MS2"	"16.90435"	"35.6"	"100.000"	"63.5443"	"20852"	"20852"	"20825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.2"	""	"39.8"	""	"44.2"	""	"62.5"	""	"70.1"	"64.9"	""	"665"	"23"	"35.000"	"28.000"	"0.167799881439873"	"21"	"0.003317"	"0.03707"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEmVESMk.[K]"	"N-Term(TMT6plex); M4(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"803.39844"	"1605.78960"	"1605.79045"	"-0.53"	"-0.00043"	"7/74"	"7"	"74"	"255203.332397461"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"64.4194"	"21173"	"21173"	"21152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.6"	""	"24.1"	""	"35.9"	""	"37.4"	""	"52.0"	"50.1"	""	"678"	"27"	"35.000"	"28.000"	"0.0716472784504623"	"26"	"0.005266"	"0.06686"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"803.39929"	"1605.79131"	"1605.79045"	"0.53"	"0.00043"	"7/74"	"7"	"74"	"133028.522705078"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"81.9293"	"28277"	"28277"	"28247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.8"	""	"19.4"	""	"19.4"	""	"22.0"	""	"31.9"	"29.2"	""	"709"	"8"	"35.000"	"28.000"	"5.3903409929017"	"17"	"0.009239"	"0.1183"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.39948"	"1605.79167"	"1605.79045"	"0.76"	"0.00061"	"5/74"	"5"	"74"	"126726.452636719"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"83.8190"	"29067"	"29067"	"29048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"21.4"	""	"17.5"	""	"17.5"	""	"19.9"	"27.3"	""	"706"	"16"	"35.000"	"28.000"	"0.801262292714989"	"14"	"0.00307"	"0.03406"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDEMVESMK"	"[R].yDEMVESmk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K9(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.5185"	"0.0000"	"1"	"1"	"1"	"803.39960"	"1605.79192"	"1605.79045"	"0.91"	"0.00073"	"7/74"	"7"	"74"	"202317.006286621"	"HCD"	"MS2"	"27.35829"	"19.5"	"100.000"	"63.2103"	"20716"	"20716"	"20689"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"23.4"	""	"21.5"	""	"35.0"	""	"38.4"	"40.7"	""	"711"	"27"	"35.000"	"28.000"	"0.0685235106639378"	"27"	"0.0001991"	"0.005209"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"535.95715"	"1605.85691"	"1605.85801"	"-0.68"	"-0.00037"	"13/104"	"13"	"104"	"2501753.33129883"	"HCD"	"MS2"	"32.07469"	"55.7"	"100.000"	"52.3279"	"16263"	"16263"	"16243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"78.3"	""	"75.7"	""	"100.8"	"1.2"	"88.7"	"93.2"	""	"1052"	"17"	"37.000"	"30.000"	"1.05435228639408"	"15"	"0.0001686"	"0.001624"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MSVEADINGLRR"	"[R].mSVEADINGLRR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"3"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q6IFU7; Q6IFU8; Q63279"	"Keratin, type I cytoskeletal 42 OS=Rattus norvegicus OX=10116 GN=Krt42 PE=3 SV=1; Keratin, type I cytoskeletal 17 OS=Rattus norvegicus OX=10116 GN=Krt17 PE=1 SV=1; Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"1"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"535.95728"	"1605.85727"	"1605.85801"	"-0.46"	"-0.00024"	"15/104"	"15"	"104"	"2426300.19195557"	"HCD"	"MS2"	"23.3058"	"56.0"	"100.000"	"51.9896"	"16159"	"16159"	"16139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.1"	""	"81.7"	""	"82.4"	""	"97.3"	"1.7"	"85.2"	"89.1"	""	"1051"	"22"	"37.000"	"30.000"	"0.372025509693864"	"15"	"0.0001686"	"0.001478"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.88593"	"1606.76457"	"1606.76606"	"-0.93"	"-0.00074"	"7/92"	"7"	"92"	"1955481.328125"	"HCD"	"MS2"	"0"	"76.4"	"100.000"	"112.8491"	"40666"	"40666"	"40649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.3"	""	"80.9"	""	"92.1"	""	"205.2"	"0.1"	"142.8"	"133.6"	""	"488"	"52"	"33.000"	"26.000"	"0.000159731226472415"	"16"	"9.9E-05"	"0.000769"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"803.88641"	"1606.76555"	"1606.76606"	"-0.32"	"-0.00026"	"5/92"	"5"	"92"	"103939.677185059"	"HCD"	"MS2"	"39.13957"	"4.5"	"100.000"	"113.2764"	"40846"	"40846"	"40815"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"6.3"	""	"6.1"	""	"7.7"	""	"10.5"	"7.1"	""	"508"	"26"	"34.000"	"27.000"	"0.0573896685636128"	"16"	"0.001615"	"0.01456"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNPEYDYLFK"	"[-].mNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K10(TMT6plex)"	"1"	"1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"P10536"	"Ras-related protein Rab-1B OS=Rattus norvegicus OX=10116 GN=Rab1b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.88666"	"1606.76604"	"1606.76606"	"-0.01"	"-0.00001"	"8/92"	"8"	"92"	"1771792.34814453"	"HCD"	"MS2"	"0"	"70.4"	"100.000"	"112.9138"	"40705"	"40705"	"40687"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.7"	""	"77.2"	""	"84.3"	""	"187.5"	"2.6"	"135.6"	"121.6"	""	"513"	"63"	"34.000"	"27.000"	"1.4291814460104E-05"	"17"	"0"	"0.0003337"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"803.89899"	"1606.79070"	"1606.79237"	"-1.04"	"-0.00084"	"8/132"	"8"	"132"	"160370.079284668"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"49.1973"	"14993"	"14993"	"14968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"11.2"	""	"10.0"	""	"27.1"	""	"28.3"	"28.2"	""	"666"	"45"	"35.000"	"28.000"	"0.000955969933814221"	"21"	"0"	"5.276E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9125"	"0.0000"	"1"	"1"	"1"	"803.89905"	"1606.79082"	"1606.79237"	"-0.96"	"-0.00077"	"11/132"	"11"	"132"	"2412581.30438232"	"HCD"	"MS2"	"0"	"130.8"	"100.000"	"50.7864"	"15640"	"15640"	"15621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.0"	""	"132.6"	""	"107.3"	""	"291.2"	"0.5"	"291.6"	"256.2"	""	"668"	"80"	"35.000"	"28.000"	"3.74754163736856E-07"	"25"	"0"	"4.079E-09"	"1.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"536.26862"	"1606.79129"	"1606.79237"	"-0.67"	"-0.00036"	"17/132"	"17"	"132"	"6408618.23352051"	"HCD"	"MS2"	"9.00666"	"64.4"	"100.000"	"49.9707"	"15342"	"15342"	"15323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.5"	""	"67.8"	""	"62.5"	""	"135.1"	""	"134.8"	"126.0"	""	"677"	"58"	"35.000"	"28.000"	"5.34021414793229E-05"	"18"	"0"	"1.042E-07"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"536.26862"	"1606.79129"	"1606.79237"	"-0.67"	"-0.00036"	"18/132"	"18"	"132"	"12070283.0272217"	"HCD"	"MS2"	"4.076881"	"72.7"	"60.939"	"50.2747"	"15466"	"15466"	"15447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.7"	""	"77.7"	""	"66.7"	""	"162.2"	""	"145.8"	"144.1"	""	"677"	"59"	"35.000"	"28.000"	"4.22239319571236E-05"	"19"	"0"	"7.748E-08"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"536.26868"	"1606.79148"	"1606.79237"	"-0.55"	"-0.00030"	"17/132"	"17"	"132"	"5638311.9831543"	"HCD"	"MS2"	"1.831465"	"64.1"	"100.000"	"50.3171"	"15448"	"15448"	"15430"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.9"	""	"66.1"	""	"63.1"	""	"133.5"	"0.9"	"124.3"	"129.1"	""	"677"	"49"	"35.000"	"28.000"	"0.000411678961218796"	"17"	"0"	"1.828E-06"	"1.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"536.26868"	"1606.79148"	"1606.79237"	"-0.55"	"-0.00030"	"18/132"	"18"	"132"	"10652710.796875"	"HCD"	"MS2"	"3.984956"	"83.3"	"79.217"	"50.6301"	"15576"	"15576"	"15558"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.3"	""	"91.7"	""	"78.0"	""	"165.5"	""	"176.9"	"165.7"	""	"677"	"61"	"35.000"	"28.000"	"2.76413132704883E-05"	"19"	"0"	"3.577E-08"	"1.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.2857"	"0.0000"	"1"	"1"	"3"	"803.89960"	"1606.79192"	"1606.79237"	"-0.28"	"-0.00023"	"9/132"	"9"	"132"	"179283.570800781"	"HCD"	"MS2"	"21.08193"	"13.9"	"100.000"	"51.1430"	"15786"	"15786"	"15763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"13.1"	""	"15.9"	""	"22.8"	""	"34.2"	"23.3"	""	"673"	"7"	"35.000"	"28.000"	"6.59151232634765"	"18"	"0.004852"	"0.05966"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"803.89972"	"1606.79216"	"1606.79237"	"-0.13"	"-0.00010"	"14/132"	"14"	"132"	"2177599.67254639"	"HCD"	"MS2"	"0"	"115.9"	"100.000"	"50.4610"	"15542"	"15542"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.4"	""	"117.1"	""	"88.4"	""	"246.7"	""	"263.7"	"237.5"	""	"682"	"78"	"35.000"	"28.000"	"5.31807403463992E-07"	"26"	"0"	"4.233E-08"	"1.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9342"	"0.0000"	"1"	"1"	"1"	"803.89972"	"1606.79216"	"1606.79237"	"-0.13"	"-0.00010"	"14/132"	"14"	"132"	"12866461.6333618"	"HCD"	"MS2"	"0"	"447.7"	"69.051"	"50.4693"	"15511"	"15511"	"15494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"602.0"	""	"433.6"	""	"362.3"	""	"1002.8"	"4.4"	"972.8"	"875.5"	""	"682"	"76"	"35.000"	"28.000"	"9.56652870541535E-07"	"22"	"0"	"3.226E-09"	"1.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"803.89978"	"1606.79228"	"1606.79237"	"-0.05"	"-0.00004"	"12/132"	"12"	"132"	"777201.754760742"	"HCD"	"MS2"	"0"	"45.1"	"100.000"	"49.8441"	"15291"	"15291"	"15260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.9"	""	"51.9"	""	"35.7"	""	"102.4"	""	"97.3"	"87.8"	""	"684"	"56"	"35.000"	"28.000"	"8.47278343710583E-05"	"21"	"0"	"2.077E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9405"	"0.0000"	"1"	"1"	"1"	"803.89990"	"1606.79253"	"1606.79237"	"0.10"	"0.00008"	"14/132"	"14"	"132"	"10990246.0498657"	"HCD"	"MS2"	"0"	"502.2"	"93.888"	"50.1599"	"15420"	"15420"	"15403"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"693.5"	""	"465.4"	""	"399.6"	""	"1127.7"	"5.6"	"1103.3"	"977.1"	""	"679"	"84"	"35.000"	"28.000"	"1.23264999594449E-07"	"23"	"0"	"3.444E-10"	"1.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSNFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9804"	"0.0000"	"1"	"1"	"1"	"803.90002"	"1606.79277"	"1606.79237"	"0.25"	"0.00020"	"8/132"	"8"	"132"	"266755.679443359"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"50.1513"	"15381"	"15381"	"15354"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"26.2"	""	"18.2"	""	"39.9"	""	"40.0"	"39.6"	""	"678"	"51"	"35.000"	"28.000"	"0.000283922426641013"	"17"	"0"	"2.247E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9851"	"0.0000"	"1"	"1"	"1"	"803.92072"	"1606.83415"	"1606.83481"	"-0.41"	"-0.00033"	"10/102"	"10"	"102"	"362964.538879395"	"HCD"	"MS2"	"23.39274"	"17.2"	"100.000"	"111.1250"	"39978"	"39978"	"39948"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"22.7"	""	"27.9"	""	"15.2"	""	"36.1"	"34.1"	""	"976"	"67"	"36.000"	"29.000"	"9.94076533920391E-06"	"18"	"0"	"2.51E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9710"	"0.0000"	"1"	"1"	"1"	"803.92072"	"1606.83415"	"1606.83481"	"-0.41"	"-0.00033"	"10/102"	"10"	"102"	"397178.79675293"	"HCD"	"MS2"	"14.98843"	"17.3"	"100.000"	"111.0256"	"39924"	"39924"	"39895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"23.5"	""	"23.2"	""	"17.7"	""	"36.3"	"34.6"	""	"976"	"69"	"36.000"	"29.000"	"5.66786923554088E-06"	"19"	"0"	"1.852E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQPNEAVYTK"	"[R].vQPNEAVYTk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.96289"	"1606.91850"	"1606.92048"	"-1.23"	"-0.00099"	"10/96"	"10"	"96"	"335809.15447998"	"HCD"	"MS2"	"100"	"29.7"	"100.000"	"56.5764"	"18023"	"18023"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.0"	""	"43.6"	""	"35.9"	""	"41.4"	""	"56.3"	"54.0"	""	"1014"	"28"	"37.000"	"30.000"	"0.0785250025788627"	"15"	"0.001217"	"0.009312"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQPNEAVYTK"	"[R].vQPNEAVYTk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"803.96350"	"1606.91973"	"1606.92048"	"-0.47"	"-0.00038"	"9/96"	"9"	"96"	"1152534.02960205"	"HCD"	"MS2"	"0"	"78.5"	"100.000"	"57.1739"	"18230"	"18230"	"18211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.0"	""	"107.6"	""	"111.9"	""	"112.7"	"1.1"	"124.3"	"147.0"	""	"1001"	"65"	"36.000"	"30.000"	"1.44678528112392E-05"	""	"0"	"7.449E-06"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQPNEAVYTK"	"[R].vQPNEAVYTk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"803.96387"	"1606.92046"	"1606.92048"	"-0.01"	"-0.00001"	"9/96"	"9"	"96"	"1107915.11425781"	"HCD"	"MS2"	"0"	"80.4"	"100.000"	"56.8653"	"18139"	"18139"	"18125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.8"	""	"103.6"	""	"112.7"	""	"107.3"	""	"134.5"	"148.5"	""	"999"	"54"	"36.000"	"29.000"	"0.000223118454279406"	"28"	"0"	"2.993E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQPNEAVYTK"	"[R].vQPNEAVYTk.[M]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"P05370"	"Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus OX=10116 GN=G6pdx PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"803.96466"	"1606.92204"	"1606.92048"	"0.97"	"0.00078"	"12/96"	"12"	"96"	"294217.999023438"	"HCD"	"MS2"	"100"	"25.5"	"100.000"	"56.8757"	"18109"	"18109"	"18081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.1"	""	"34.8"	""	"32.2"	""	"44.9"	""	"46.5"	"43.1"	""	"1001"	"41"	"36.000"	"30.000"	"0.00392106536204489"	"15"	"0.0001991"	"0.002301"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.38879"	"1607.77031"	"1607.77638"	"-3.78"	"-0.00304"	"7/132"	"7"	"132"	"242683.091552734"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"54.1990"	"17061"	"17061"	"17031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"20.1"	""	"21.1"	""	"39.7"	""	"38.9"	"47.0"	""	"526"	"22"	"34.000"	"27.000"	"0.164420418200006"	"14"	"0.0005161"	"0.006945"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"804.39038"	"1607.77349"	"1607.77638"	"-1.80"	"-0.00145"	"8/132"	"8"	"132"	"307331.804077148"	"HCD"	"MS2"	"31.46102"	"23.9"	"100.000"	"54.7116"	"17270"	"17270"	"17244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"24.2"	""	"30.4"	""	"45.5"	""	"45.1"	"50.0"	""	"533"	"23"	"34.000"	"27.000"	"0.144443237292033"	"17"	"0.0001991"	"0.002695"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5714"	"0.0000"	"1"	"1"	"1"	"804.39087"	"1607.77446"	"1607.77638"	"-1.20"	"-0.00096"	"4/132"	"4"	"132"	"235053.276550293"	"HCD"	"MS2"	"28.87043"	"20.1"	"100.000"	"55.0404"	"17370"	"17370"	"17351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"23.8"	""	"20.5"	""	"40.5"	""	"37.6"	"37.6"	""	"545"	"7"	"34.000"	"27.000"	"5.10936003448371"	"16"	"0.001999"	"0.01746"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.39136"	"1607.77544"	"1607.77638"	"-0.59"	"-0.00047"	"6/132"	"6"	"132"	"227480.764282227"	"HCD"	"MS2"	"12.56586"	"14.9"	"100.000"	"59.2028"	"19092"	"19092"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"18.2"	""	"12.6"	""	"34.4"	""	"27.4"	"26.7"	""	"556"	"21"	"34.000"	"27.000"	"0.227009899237689"	"14"	"0.0001991"	"0.004566"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"804.39160"	"1607.77593"	"1607.77638"	"-0.28"	"-0.00023"	"7/132"	"7"	"132"	"273993.319030762"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"60.5270"	"19596"	"19596"	"19572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"24.5"	""	"22.0"	""	"44.3"	""	"41.8"	"47.7"	""	"552"	"24"	"34.000"	"27.000"	"0.110384750934063"	"22"	"9.9E-05"	"0.0008534"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"804.39191"	"1607.77654"	"1607.77638"	"0.09"	"0.00008"	"6/132"	"6"	"132"	"268540.513305664"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"60.4461"	"19596"	"19596"	"19574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"23.6"	""	"21.5"	""	"46.5"	""	"43.2"	"42.6"	""	"557"	"18"	"34.000"	"27.000"	"0.459013226039855"	"22"	"0.0001991"	"0.004174"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGNFGPGPGSnFR.[G]"	"N-Term(TMT6plex); N13(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.3529"	"0.0000"	"1"	"1"	"1"	"804.39227"	"1607.77727"	"1607.77638"	"0.55"	"0.00044"	"4/132"	"4"	"132"	"125881.30670166"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"59.1500"	"19036"	"19036"	"19006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"10.1"	""	"6.1"	""	"20.1"	""	"25.3"	"15.8"	""	"561"	"17"	"34.000"	"27.000"	"0.566151765012678"	"25"	"0.002628"	"0.02741"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"804.39252"	"1607.77776"	"1607.77638"	"0.85"	"0.00069"	"6/132"	"6"	"132"	"144096.056152344"	"HCD"	"MS2"	"100"	"12.8"	"100.000"	"54.4750"	"17140"	"17140"	"17112"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"15.4"	""	"12.2"	""	"26.5"	""	"28.3"	"23.6"	""	"571"	"12"	"34.000"	"27.000"	"1.78486803787458"	"14"	"0.001261"	"0.01015"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGGGNFGPGPGSNFR"	"[R].gGGGnFGPGPGSNFR.[G]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"804.39276"	"1607.77825"	"1607.77638"	"1.16"	"0.00093"	"6/132"	"6"	"132"	"318378.485412598"	"HCD"	"MS2"	"31.23026"	"27.5"	"100.000"	"60.1354"	"19470"	"19470"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"27.4"	""	"27.4"	""	"48.7"	"1.2"	"60.1"	"56.4"	""	"569"	"20"	"34.000"	"27.000"	"0.299283153102707"	"22"	"9.9E-05"	"0.0007106"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"804.41449"	"1607.82170"	"1607.82267"	"-0.60"	"-0.00048"	"6/130"	"6"	"130"	"194425.125854492"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"77.8954"	"26665"	"26665"	"26641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"23.6"	""	"19.9"	""	"23.5"	""	"29.4"	"25.1"	""	"899"	"25"	"36.000"	"29.000"	"0.153719759409912"	"15"	"9.9E-05"	"0.0005755"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.41498"	"1607.82268"	"1607.82267"	"0.01"	"0.00001"	"13/130"	"13"	"130"	"232983.819702148"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"77.8149"	"26605"	"26605"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"24.6"	""	"21.4"	""	"28.3"	""	"34.6"	"24.7"	""	"895"	"25"	"36.000"	"29.000"	"0.152683827950813"	"14"	"0"	"9.776E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.41559"	"1607.82390"	"1607.82267"	"0.77"	"0.00062"	"9/130"	"9"	"130"	"385393.408508301"	"HCD"	"MS2"	"0"	"25.0"	"100.000"	"78.1189"	"26728"	"26728"	"26710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"36.1"	""	"31.5"	""	"48.0"	"1.0"	"42.2"	"48.0"	""	"888"	"63"	"36.000"	"29.000"	"2.34090058471733E-05"	"17"	"0"	"7.549E-07"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALVGQAEDFSGR"	"[K].eALVGQAEDFSGR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P00176"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1"	"P00176; P04167"	"Cytochrome P450 2B1 OS=Rattus norvegicus OX=10116 GN=Cyp2b1 PE=1 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.41559"	"1607.82390"	"1607.82267"	"0.77"	"0.00062"	"9/130"	"9"	"130"	"388747.367126465"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"78.2294"	"26800"	"26800"	"26781"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.8"	""	"31.9"	""	"30.5"	""	"36.3"	""	"36.1"	"48.8"	""	"888"	"62"	"36.000"	"29.000"	"2.70634382374635E-05"	"16"	"0"	"9.752E-07"	"1.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNVRPLQPLGNR"	"[K].dNVRPLQPLGNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.64392"	"1607.91721"	"1607.91790"	"-0.43"	"-0.00023"	"17/108"	"17"	"108"	"5894704.33935547"	"HCD"	"MS2"	"9.932667"	"134.5"	"100.000"	"42.6121"	"12319"	"12319"	"12298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.0"	""	"122.4"	""	"122.3"	""	"272.8"	"1.8"	"289.8"	"326.3"	""	"939"	"26"	"36.000"	"29.000"	"0.125497650886742"	"14"	"0"	"4.889E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNVRPLQPLGNR"	"[K].dNVRPLQPLGNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"P48284"	"Carbonic anhydrase 4 OS=Rattus norvegicus OX=10116 GN=Ca4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.64410"	"1607.91776"	"1607.91790"	"-0.09"	"-0.00005"	"13/108"	"13"	"108"	"6092875.87249756"	"HCD"	"MS2"	"13.13991"	"142.7"	"100.000"	"42.4554"	"12289"	"12289"	"12271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.7"	""	"145.8"	""	"123.1"	""	"284.9"	"2.4"	"300.8"	"344.4"	""	"922"	"27"	"36.000"	"29.000"	"0.0952140251828653"	"14"	"0"	"3.991E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"804.47418"	"1607.94109"	"1607.94088"	"0.13"	"0.00010"	"10/92"	"10"	"92"	"147536.862792969"	"HCD"	"MS2"	"17.06631"	"13.7"	"100.000"	"110.4132"	"39688"	"39688"	"39660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.6"	""	"17.8"	""	"22.1"	""	"21.3"	""	"29.0"	"21.5"	""	"761"	"31"	"35.000"	"28.000"	"0.0311425851885287"	"24"	"0.0001686"	"0.001499"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVQEVTDFAK"	"[K].lVQEVTDFAk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"804.47528"	"1607.94328"	"1607.94088"	"1.50"	"0.00120"	"9/92"	"9"	"92"	"189582.564086914"	"HCD"	"MS2"	"19.17673"	"17.3"	"100.000"	"110.2029"	"39589"	"39589"	"39565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"29.2"	""	"24.5"	""	"31.7"	""	"29.9"	"25.0"	""	"741"	"23"	"35.000"	"28.000"	"0.193102640464432"	"18"	"0.001217"	"0.009511"	"0.246"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPNEIHAk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"536.65491"	"1607.95017"	"1607.95211"	"-1.21"	"-0.00065"	"13/88"	"13"	"88"	"18795592.6518555"	"HCD"	"MS2"	"4.318921"	"245.1"	"57.707"	"55.0521"	"17375"	"17375"	"17358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"408.4"	""	"329.0"	""	"353.9"	""	"382.8"	""	"419.9"	"428.6"	""	"745"	"51"	"35.000"	"28.000"	"0.000331227416402086"	"18"	"0"	"1.431E-06"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPNEIHAk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"536.65509"	"1607.95072"	"1607.95211"	"-0.87"	"-0.00047"	"11/88"	"11"	"88"	"3894033.81304932"	"HCD"	"MS2"	"14.27068"	"99.1"	"100.000"	"54.9551"	"17369"	"17369"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.8"	""	"132.5"	""	"145.0"	""	"139.9"	""	"186.3"	"185.7"	""	"743"	"40"	"35.000"	"28.000"	"0.00338032780782882"	"16"	"0"	"9.921E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPNEIHAk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"536.65546"	"1607.95182"	"1607.95211"	"-0.18"	"-0.00010"	"9/88"	"9"	"88"	"15624610.4821777"	"HCD"	"MS2"	"13.98853"	"307.9"	"84.697"	"54.3623"	"17127"	"17127"	"17111"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"503.7"	""	"432.5"	""	"460.1"	""	"466.4"	""	"518.1"	"531.1"	""	"711"	"46"	"35.000"	"28.000"	"0.000835294467811573"	"18"	"0"	"2.21E-06"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPNEIHAk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"536.65564"	"1607.95237"	"1607.95211"	"0.16"	"0.00008"	"12/88"	"12"	"88"	"17647288.2915649"	"HCD"	"MS2"	"6.465403"	"336.9"	"82.996"	"54.6542"	"17246"	"17246"	"17236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"539.5"	""	"464.1"	""	"475.8"	""	"511.9"	""	"601.5"	"598.3"	""	"706"	"45"	"35.000"	"28.000"	"0.00100872946181136"	"18"	"0"	"1.762E-06"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VIEPNEIHAK"	"[K].vIEPNEIHAk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"Q8VIF7"	"Methanethiol oxidase OS=Rattus norvegicus OX=10116 GN=Selenbp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"536.65576"	"1607.95273"	"1607.95211"	"0.39"	"0.00021"	"16/88"	"16"	"88"	"14954876.1782227"	"HCD"	"MS2"	"15.22984"	"338.4"	"95.286"	"54.7650"	"17258"	"17258"	"17241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"571.1"	""	"474.6"	""	"480.5"	""	"519.3"	""	"582.0"	"574.9"	""	"674"	"43"	"35.000"	"28.000"	"0.00178496580591489"	"17"	"0"	"1.725E-06"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTEADKK"	"[R].aASTEADkk.[L]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1;Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"P42676; P24155"	"Neurolysin, mitochondrial OS=Rattus norvegicus OX=10116 GN=Nln PE=1 SV=1; Thimet oligopeptidase OS=Rattus norvegicus OX=10116 GN=Thop1 PE=1 SV=4"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.65656"	"1607.95511"	"1607.95715"	"-1.27"	"-0.00068"	"5/74"	"5"	"74"	"1976075.23620605"	"HCD"	"MS2"	"0"	"140.6"	"100.000"	"26.4940"	"5866"	"5866"	"5856"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"231.1"	""	"148.3"	""	"193.0"	""	"231.4"	"2.7"	"279.4"	"246.2"	""	"656"	"4"	"35.000"	"28.000"	"14.0887947978883"	"13"	"0.001049"	"0.008599"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEAFEHENK"	"[K].fEAFEHENk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.95154"	"1608.84006"	"1608.84223"	"-1.35"	"-0.00072"	"9/76"	"9"	"76"	"2161619.83007813"	"HCD"	"MS2"	"26.29536"	"72.1"	"100.000"	"60.5983"	"19625"	"19625"	"19602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.6"	""	"84.5"	""	"91.1"	""	"114.2"	"1.3"	"153.9"	"146.1"	""	"1030"	"22"	"37.000"	"30.000"	"0.297034728647009"	"14"	"0.0001991"	"0.003387"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEAFEHENK"	"[K].fEAFEHENk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.95160"	"1608.84024"	"1608.84223"	"-1.23"	"-0.00066"	"8/76"	"8"	"76"	"1991682.590271"	"HCD"	"MS2"	"38.5528"	"64.6"	"100.000"	"60.5060"	"19620"	"19620"	"19602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"92.8"	""	"74.1"	""	"85.0"	""	"103.6"	""	"134.8"	"126.8"	""	"1034"	"21"	"37.000"	"30.000"	"0.440038365750629"	"14"	"0.0001991"	"0.003371"	"0.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEAFEHENK"	"[K].fEAFEHENk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"536.95178"	"1608.84079"	"1608.84223"	"-0.89"	"-0.00048"	"11/76"	"11"	"76"	"2836845.48706055"	"HCD"	"MS2"	"35.00902"	"98.0"	"100.000"	"60.2206"	"19505"	"19505"	"19477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.2"	""	"120.2"	""	"124.1"	""	"165.7"	"0.0"	"188.0"	"184.5"	""	"1045"	"34"	"37.000"	"30.000"	"0.0201412441880366"	"23"	"0"	"0.0003042"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEAFEHENK"	"[K].fEAFEHENk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"B2RZ78"	"Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"536.95209"	"1608.84171"	"1608.84223"	"-0.32"	"-0.00017"	"7/76"	"7"	"76"	"2784403.16168213"	"HCD"	"MS2"	"45.18842"	"89.5"	"100.000"	"60.3013"	"19504"	"19504"	"19480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.9"	""	"115.4"	""	"111.4"	""	"146.8"	"1.4"	"178.4"	"169.2"	""	"1037"	"23"	"37.000"	"30.000"	"0.264088056643156"	"14"	"9.9E-05"	"0.0008418"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"804.92957"	"1608.85185"	"1608.85212"	"-0.17"	"-0.00013"	"6/86"	"6"	"86"	"320465.61340332"	"HCD"	"MS2"	"0"	"23.6"	"100.000"	"45.5641"	"13522"	"13522"	"13494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.0"	""	"24.1"	""	"27.4"	""	"38.5"	""	"53.9"	"55.1"	""	"1040"	"39"	"37.000"	"30.000"	"0.00622305076279766"	"21"	"0.002166"	"0.01986"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"804.92969"	"1608.85210"	"1608.85212"	"-0.02"	"-0.00001"	"7/86"	"7"	"86"	"806702.323913574"	"HCD"	"MS2"	"0"	"58.9"	"100.000"	"44.9924"	"13323"	"13323"	"13299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.1"	""	"73.2"	""	"69.0"	""	"85.4"	"0.1"	"133.1"	"130.5"	""	"1050"	"51"	"37.000"	"30.000"	"0.000450982098790333"	"19"	"0.0001991"	"0.002077"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"804.92981"	"1608.85234"	"1608.85212"	"0.14"	"0.00011"	"7/86"	"7"	"86"	"174599.643127441"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"45.3305"	"13461"	"13461"	"13436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.4"	""	"14.8"	""	"12.9"	""	"23.4"	""	"28.8"	"23.8"	""	"1061"	"36"	"37.000"	"30.000"	"0.0122937786180828"	"21"	"0.001951"	"0.01626"	"0.198"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEEYPESAK"	"[R].tPEEYPESAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"O08557"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ddah1 PE=1 SV=3"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"804.93054"	"1608.85381"	"1608.85212"	"1.05"	"0.00084"	"7/86"	"7"	"86"	"547676.368347168"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"45.2397"	"13390"	"13390"	"13362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"46.6"	""	"48.0"	""	"66.5"	"1.6"	"109.0"	"85.8"	""	"1063"	"47"	"37.000"	"30.000"	"0.000989699313136314"	"23"	"0.0001991"	"0.002325"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLVEYQELTGAR"	"[K].tLVEYQELTGAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q80WA4"	"RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=2 SV=1"	"Q80WA4"	"RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"804.94391"	"1608.88054"	"1608.87945"	"0.68"	"0.00054"	"8/116"	"8"	"116"	"79141.3367919922"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"93.5426"	"32948"	"32948"	"32923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"10.0"	""	"4.9"	""	"12.0"	""	"14.3"	"10.8"	""	"995"	"11"	"36.000"	"29.000"	"4.19559041987727"	"14"	"0.0042"	"0.04547"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"805.44360"	"1609.87993"	"1609.88376"	"-2.38"	"-0.00191"	"11/92"	"11"	"92"	"167075.733032227"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"82.9890"	"28731"	"28731"	"28704"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"13.9"	""	"19.8"	""	"24.7"	""	"22.4"	"29.7"	""	"958"	"44"	"36.000"	"29.000"	"0.0020622224642553"	"21"	"0"	"0.0002753"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.4062"	"0.0000"	"1"	"1"	"1"	"537.29871"	"1609.88156"	"1609.88376"	"-1.36"	"-0.00073"	"10/80"	"10"	"80"	"3038807.18548584"	"HCD"	"MS2"	"16.03073"	"81.0"	"100.000"	"71.5988"	"24088"	"24088"	"24068"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.1"	""	"79.6"	""	"95.5"	""	"133.2"	""	"163.4"	"160.5"	""	"955"	"32"	"36.000"	"29.000"	"0.0301976659032145"	""	"0.001615"	"0.01481"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8909"	"0.0000"	"1"	"1"	"1"	"805.44458"	"1609.88188"	"1609.88376"	"-1.16"	"-0.00094"	"16/92"	"16"	"92"	"311524.622192383"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"83.0176"	"28714"	"28714"	"28690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"32.1"	""	"43.1"	""	"49.7"	""	"59.4"	"61.4"	""	"940"	"55"	"36.000"	"29.000"	"0.000159623878117492"	"22"	"0"	"1.512E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"537.29895"	"1609.88230"	"1609.88376"	"-0.91"	"-0.00049"	"10/80"	"10"	"80"	"2873519.60064697"	"HCD"	"MS2"	"24.96837"	"78.9"	"100.000"	"71.6994"	"24160"	"24160"	"24139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.6"	""	"83.7"	""	"85.6"	""	"136.0"	""	"154.8"	"143.2"	""	"945"	"32"	"36.000"	"29.000"	"0.0307894416193748"	""	"0.002834"	"0.03053"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.2703"	"0.0000"	"1"	"1"	"1"	"537.29901"	"1609.88248"	"1609.88376"	"-0.79"	"-0.00043"	"7/80"	"7"	"80"	"6074702.64788818"	"HCD"	"MS2"	"7.000376"	"157.0"	"100.000"	"71.8951"	"24209"	"24209"	"24191"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"260.4"	""	"154.1"	""	"194.9"	""	"243.3"	"2.1"	"320.3"	"313.9"	""	"945"	"37"	"36.000"	"29.000"	"0.00849966507398351"	""	"0.001217"	"0.009447"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6585"	"0.0000"	"1"	"1"	"1"	"805.44519"	"1609.88310"	"1609.88376"	"-0.41"	"-0.00033"	"6/80"	"6"	"80"	"584141.393920898"	"HCD"	"MS2"	"61.23239"	"62.7"	"100.000"	"71.4972"	"24047"	"24047"	"24021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.3"	""	"79.2"	""	"70.4"	""	"90.7"	"0.1"	"122.3"	"118.0"	""	"948"	"41"	"36.000"	"29.000"	"0.00417617165805799"	"29"	"0"	"5.743E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"537.29926"	"1609.88321"	"1609.88376"	"-0.34"	"-0.00018"	"7/80"	"7"	"80"	"6255201.92376709"	"HCD"	"MS2"	"5.097863"	"155.2"	"100.000"	"72.0029"	"24284"	"24284"	"24266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"273.1"	""	"153.8"	""	"166.5"	""	"247.9"	""	"312.6"	"319.5"	""	"946"	"39"	"36.000"	"29.000"	"0.00603755556567766"	""	"0.0001991"	"0.004174"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"805.44543"	"1609.88359"	"1609.88376"	"-0.10"	"-0.00008"	"16/80"	"16"	"80"	"929352.881835938"	"HCD"	"MS2"	"15.76353"	"91.4"	"100.000"	"71.6603"	"24144"	"24144"	"24123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.4"	""	"90.1"	""	"111.1"	""	"147.4"	"1.1"	"177.4"	"166.3"	""	"948"	"52"	"36.000"	"29.000"	"0.000330962159532579"	""	"0"	"2.274E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6809"	"0.0000"	"1"	"1"	"1"	"805.44556"	"1609.88384"	"1609.88376"	"0.05"	"0.00004"	"8/80"	"8"	"80"	"3578677.86035156"	"HCD"	"MS2"	"0"	"296.1"	"100.000"	"71.9594"	"24267"	"24267"	"24250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"575.1"	""	"275.6"	""	"326.4"	""	"464.0"	""	"580.5"	"587.0"	""	"955"	"47"	"36.000"	"29.000"	"0.000977177314036032"	""	"0"	"0.0003185"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6735"	"0.0000"	"1"	"1"	"1"	"805.44562"	"1609.88396"	"1609.88376"	"0.12"	"0.00010"	"8/80"	"8"	"80"	"3497530.07568359"	"HCD"	"MS2"	"0"	"288.8"	"100.000"	"71.7847"	"24164"	"24164"	"24145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"538.3"	""	"279.9"	""	"314.0"	""	"459.2"	"1.2"	"559.2"	"585.5"	""	"954"	"49"	"36.000"	"29.000"	"0.000614495036157625"	""	"0"	"0.0001114"	"0.644"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"805.44568"	"1609.88408"	"1609.88376"	"0.20"	"0.00016"	"9/92"	"9"	"92"	"482909.043762207"	"HCD"	"MS2"	"2.91358"	"41.2"	"100.000"	"83.5677"	"28966"	"28966"	"28949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.2"	""	"45.4"	""	"55.2"	""	"63.9"	"1.2"	"91.8"	"84.7"	""	"952"	"69"	"36.000"	"29.000"	"5.72277870877888E-06"	"25"	"0"	"6.191E-07"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"805.44568"	"1609.88408"	"1609.88376"	"0.20"	"0.00016"	"9/92"	"9"	"92"	"1012283.73809814"	"HCD"	"MS2"	"0"	"82.9"	"100.000"	"83.2842"	"28850"	"28850"	"28835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.8"	""	"103.0"	""	"102.7"	""	"134.7"	""	"182.6"	"177.3"	""	"952"	"65"	"36.000"	"29.000"	"1.5261841984646E-05"	"25"	"0"	"2.948E-07"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"805.44574"	"1609.88420"	"1609.88376"	"0.28"	"0.00022"	"6/80"	"6"	"80"	"847122.912780762"	"HCD"	"MS2"	"0"	"81.2"	"100.000"	"72.1088"	"24292"	"24292"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.2"	""	"76.5"	""	"86.8"	""	"122.3"	""	"174.9"	"170.1"	""	"952"	"42"	"36.000"	"29.000"	"0.00313766774136297"	""	"0"	"5.571E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"805.44598"	"1609.88469"	"1609.88376"	"0.58"	"0.00047"	"9/92"	"9"	"92"	"980529.895080566"	"HCD"	"MS2"	"0"	"83.4"	"100.000"	"83.3147"	"28834"	"28834"	"28821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.8"	""	"91.8"	""	"119.8"	""	"138.2"	"2.0"	"173.8"	"177.8"	""	"938"	"65"	"36.000"	"29.000"	"1.39371136888514E-05"	"23"	"0"	"3.38E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLAEVAAGDDK"	"[R].yLAEVAAGDDk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"805.44611"	"1609.88494"	"1609.88376"	"0.73"	"0.00059"	"8/92"	"8"	"92"	"277057.145141602"	"HCD"	"MS2"	"5.647681"	"23.8"	"100.000"	"83.5961"	"28948"	"28948"	"28931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"28.5"	""	"30.2"	""	"38.2"	"0.6"	"47.4"	"51.2"	""	"950"	"48"	"36.000"	"29.000"	"0.000677163606961039"	"22"	"0"	"4.554E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YIDQEELNK"	"[K].yIDQEELNk.[T]"	"N-Term(TMT6plex); K9(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6731"	"0.0000"	"1"	"1"	"1"	"805.44611"	"1609.88494"	"1609.88376"	"0.73"	"0.00059"	"7/80"	"7"	"80"	"480068.358215332"	"HCD"	"MS2"	"0"	"46.2"	"100.000"	"72.2770"	"24390"	"24390"	"24374"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.4"	""	"42.5"	""	"51.1"	""	"68.2"	"0.5"	"101.1"	"90.0"	""	"950"	"52"	"36.000"	"29.000"	"0.000272705319548481"	""	"0"	"1.126E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMDQIITSK"	"[R].tDMDQIITSk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"805.44629"	"1609.88530"	"1609.88713"	"-1.14"	"-0.00091"	"11/98"	"11"	"98"	"221249.11151123"	"HCD"	"MS2"	"26.68911"	"19.8"	"100.000"	"90.2430"	"31656"	"31656"	"31637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.9"	""	"27.1"	""	"26.5"	""	"26.2"	""	"37.6"	"37.6"	""	"955"	"30"	"36.000"	"29.000"	"0.0468784642792043"	"19"	"0.0001991"	"0.003565"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMDQIITSK"	"[R].tDMDQIITSk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"805.44708"	"1609.88689"	"1609.88713"	"-0.15"	"-0.00012"	"10/98"	"10"	"98"	"205274.437072754"	"HCD"	"MS2"	"14.30454"	"20.1"	"100.000"	"90.6915"	"31798"	"31798"	"31779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.9"	""	"22.9"	""	"34.0"	""	"19.2"	""	"37.3"	"42.5"	""	"955"	"25"	"36.000"	"29.000"	"0.15594568986229"	"17"	"0.0001991"	"0.002729"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMDQIITSK"	"[R].tDMDQIITSk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"805.44720"	"1609.88713"	"1609.88713"	"0.00"	"0.00000"	"11/98"	"11"	"98"	"249464.512756348"	"HCD"	"MS2"	"20.00065"	"23.0"	"100.000"	"90.5496"	"31779"	"31779"	"31764"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"30.6"	""	"29.9"	""	"31.9"	""	"42.5"	"48.3"	""	"955"	"32"	"36.000"	"29.000"	"0.0316937316116911"	"17"	"0.0001991"	"0.003483"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDMDQIITSK"	"[R].tDMDQIITSk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"805.44733"	"1609.88738"	"1609.88713"	"0.15"	"0.00012"	"5/98"	"5"	"98"	"192001.176391602"	"HCD"	"MS2"	"23.18907"	"17.9"	"100.000"	"90.3337"	"31655"	"31655"	"31632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"22.1"	""	"27.9"	""	"20.5"	""	"36.6"	"35.8"	""	"955"	"25"	"36.000"	"29.000"	"0.139307139918556"	"18"	"0.001615"	"0.01386"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGAHAPELTK"	"[R].lDGAHAPELTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"537.31464"	"1609.92936"	"1609.93138"	"-1.26"	"-0.00067"	"8/96"	"8"	"96"	"2070471.76763916"	"HCD"	"MS2"	"44.25577"	"62.5"	"100.000"	"60.6466"	"19677"	"19677"	"19657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.0"	""	"81.2"	""	"82.1"	""	"105.1"	""	"121.8"	"125.2"	""	"834"	"29"	"36.000"	"29.000"	"0.0554799492296863"	"19"	"0"	"0.0003603"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDGAHAPELTK"	"[R].lDGAHAPELTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"Q9JLZ1"	"Glutaredoxin-3 OS=Rattus norvegicus OX=10116 GN=Glrx3 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"537.31506"	"1609.93064"	"1609.93138"	"-0.46"	"-0.00025"	"8/96"	"8"	"96"	"2205531.94903564"	"HCD"	"MS2"	"39.52201"	"63.9"	"100.000"	"60.7111"	"19671"	"19671"	"19647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.2"	""	"73.6"	""	"80.7"	""	"103.1"	"0.9"	"128.7"	"129.4"	""	"827"	"25"	"36.000"	"29.000"	"0.144702326566226"	"15"	"9.9E-05"	"0.0004685"	"0.516"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWAEDGEFTSAR"	"[K].lWAEDGEFTSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.90417"	"1610.80107"	"1610.80120"	"-0.08"	"-0.00006"	"10/100"	"10"	"100"	"554963.605224609"	"HCD"	"MS2"	"38.16897"	"28.6"	"100.000"	"97.1881"	"34426"	"34426"	"34409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"23.0"	""	"29.3"	""	"53.7"	"0.8"	"62.7"	"76.7"	""	"732"	"40"	"35.000"	"28.000"	"0.00360148064708575"	"15"	"0"	"1.441E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LWAEDGEFTSAR"	"[K].lWAEDGEFTSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"2"	"2"	"0.9574"	"0.0000"	"1"	"1"	"1"	"805.90472"	"1610.80217"	"1610.80120"	"0.60"	"0.00048"	"10/100"	"10"	"100"	"635158.345703125"	"HCD"	"MS2"	"41.31891"	"31.9"	"100.000"	"97.2809"	"34494"	"34494"	"34474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"29.3"	""	"31.0"	""	"60.5"	""	"72.1"	"83.7"	""	"735"	"47"	"35.000"	"28.000"	"0.00070836540559767"	"18"	"0"	"1.434E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"805.91199"	"1610.81670"	"1610.81730"	"-0.37"	"-0.00030"	"9/128"	"9"	"128"	"1002208.62042236"	"HCD"	"MS2"	"13.4097"	"25.7"	"100.000"	"106.7170"	"38277"	"38277"	"38264"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.9"	""	"33.1"	""	"41.5"	""	"38.4"	""	"44.6"	"48.5"	"NoQuanLabels"	"839"	"34"	"36.000"	"29.000"	"0.0173672863586877"	"21"	"0"	"0.0002251"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"805.91217"	"1610.81706"	"1610.81730"	"-0.14"	"-0.00012"	"9/128"	"9"	"128"	"686357.292663574"	"HCD"	"MS2"	"23.60272"	"13.0"	"100.000"	"106.4364"	"38147"	"38147"	"38134"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"19.1"	""	"19.6"	""	"22.7"	""	"23.7"	"19.3"	"NoQuanLabels"	"839"	"33"	"36.000"	"29.000"	"0.019174849554344"	"19"	"0.0001991"	"0.003754"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGTFVVSQPLNYR"	"[M].sTGTFVVSQPLNYR.[G]"	"N-Term(Prot)(Acetyl)"	"1"	"1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"Q9JLJ3"	"4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus OX=10116 GN=Aldh9a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.91254"	"1610.81780"	"1610.81730"	"0.31"	"0.00025"	"9/128"	"9"	"128"	"240753.797729492"	"HCD"	"MS2"	"60.84906"	"12.4"	"100.000"	"106.9441"	"38367"	"38367"	"38356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"24.0"	""	"22.5"	""	"12.5"	""	"14.3"	"19.6"	"NoQuanLabels"	"849"	"7"	"36.000"	"29.000"	"9.13855846390496"	"13"	"0.004672"	"0.05469"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITNIPDEYFNR"	"[K].iTNIPDEYFNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.92218"	"1610.83708"	"1610.83759"	"-0.31"	"-0.00025"	"9/106"	"9"	"106"	"313148.635009766"	"HCD"	"MS2"	"33.40122"	"18.7"	"100.000"	"102.4695"	"36565"	"36565"	"36543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.8"	""	"11.5"	""	"11.7"	""	"38.3"	""	"55.2"	"48.4"	""	"917"	"8"	"36.000"	"29.000"	"7.20011345786935"	"13"	"0.002834"	"0.02985"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITNIPDEYFNR"	"[K].iTNIPDEYFNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"805.92279"	"1610.83830"	"1610.83759"	"0.45"	"0.00036"	"9/106"	"9"	"106"	"413784.942016602"	"HCD"	"MS2"	"0"	"19.8"	"100.000"	"102.9710"	"36789"	"36789"	"36774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"13.5"	""	"10.2"	""	"38.1"	""	"47.3"	"62.5"	""	"926"	"35"	"36.000"	"29.000"	"0.0141117538019776"	"16"	"0.0001686"	"0.00178"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITNIPDEYFNR"	"[K].iTNIPDEYFNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"805.92285"	"1610.83843"	"1610.83759"	"0.52"	"0.00042"	"5/106"	"5"	"106"	"325968.166625977"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"102.7696"	"36686"	"36686"	"36669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"10.5"	""	"17.3"	""	"32.0"	""	"38.7"	"52.5"	""	"926"	"29"	"36.000"	"29.000"	"0.0552816492366958"	"15"	"0.0001991"	"0.002116"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITNIPDEYFNR"	"[K].iTNIPDEYFNR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"P51886"	"Lumican OS=Rattus norvegicus OX=10116 GN=Lum PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.92303"	"1610.83879"	"1610.83759"	"0.75"	"0.00060"	"13/106"	"13"	"106"	"287867.118774414"	"HCD"	"MS2"	"10.26655"	"15.1"	"100.000"	"102.6915"	"36677"	"36677"	"36660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"11.7"	""	"12.0"	""	"37.3"	""	"31.5"	"42.4"	""	"929"	"19"	"36.000"	"29.000"	"0.523583218393525"	"14"	"0.0001991"	"0.005752"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDAIVMDPK"	"[K].tFDAIVmDPk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"805.94617"	"1610.88506"	"1610.88640"	"-0.83"	"-0.00067"	"6/86"	"6"	"86"	"172519.434936523"	"HCD"	"MS2"	"23.40301"	"12.8"	"100.000"	"93.1896"	"32842"	"32842"	"32816"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"15.9"	""	"17.5"	""	"30.6"	""	"25.6"	"17.8"	""	"947"	"27"	"36.000"	"29.000"	"0.0942583826010432"	"17"	"0.002166"	"0.01981"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFDAIVMDPK"	"[K].tFDAIVmDPk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K10(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.8372"	"0.0000"	"1"	"1"	"1"	"805.94739"	"1610.88750"	"1610.88640"	"0.68"	"0.00055"	"6/86"	"6"	"86"	"162566.885986328"	"HCD"	"MS2"	"20.17003"	"10.6"	"100.000"	"93.2354"	"32824"	"32824"	"32799"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"13.4"	""	"17.2"	""	"26.1"	""	"19.2"	"14.1"	""	"951"	"43"	"36.000"	"29.000"	"0.00228639110187846"	"22"	"0.001217"	"0.009345"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGETAEGWK"	"[K].eFGETAEGWk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"Q63083"	"Nucleobindin-1 OS=Rattus norvegicus OX=10116 GN=Nucb1 PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"806.42401"	"1611.84075"	"1611.84189"	"-0.71"	"-0.00057"	"6/84"	"6"	"84"	"99639.3910522461"	"HCD"	"MS2"	"22.29118"	"9.5"	"100.000"	"87.0646"	"30375"	"30375"	"30350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"9.5"	""	"10.7"	""	"14.4"	""	"20.9"	"17.7"	""	"928"	"10"	"36.000"	"29.000"	"4.69372866776593"	"17"	"0.006613"	"0.08283"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"806.44391"	"1611.88054"	"1611.88165"	"-0.69"	"-0.00055"	"8/82"	"8"	"82"	"379513.358581543"	"HCD"	"MS2"	"0"	"38.3"	"100.000"	"93.5769"	"32997"	"32997"	"32984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.9"	""	"56.0"	""	"54.7"	""	"43.5"	"0.5"	"52.2"	"71.7"	""	"939"	"61"	"36.000"	"29.000"	"4.10804882469281E-05"	"25"	"0"	"9.99E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"806.44427"	"1611.88127"	"1611.88165"	"-0.23"	"-0.00019"	"16/82"	"16"	"82"	"821305.588317871"	"HCD"	"MS2"	"0"	"79.1"	"100.000"	"93.8609"	"33112"	"33112"	"33094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"151.4"	""	"108.7"	""	"134.2"	""	"66.1"	"0.5"	"124.3"	"162.3"	""	"925"	"52"	"36.000"	"29.000"	"0.000278042853586016"	"23"	"0"	"5.608E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"537.96533"	"1611.88144"	"1611.88165"	"-0.13"	"-0.00007"	"5/82"	"5"	"82"	"4010880.95092773"	"HCD"	"MS2"	"27.98267"	"102.3"	"100.000"	"93.8086"	"33055"	"33055"	"33037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.1"	""	"123.0"	""	"138.2"	""	"141.0"	"0.6"	"187.2"	"206.0"	""	"925"	"23"	"36.000"	"29.000"	"0.254162654159151"	"15"	"0.0001991"	"0.002267"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"537.96539"	"1611.88163"	"1611.88165"	"-0.01"	"-0.00001"	"5/82"	"5"	"82"	"3194258.96838379"	"HCD"	"MS2"	"26.14725"	"79.3"	"100.000"	"93.6739"	"33036"	"33036"	"33026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.1"	""	"101.5"	""	"94.2"	""	"105.6"	""	"145.9"	"167.9"	""	"924"	"22"	"36.000"	"29.000"	"0.262810054049855"	"14"	"0.0001991"	"0.002298"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"806.44482"	"1611.88237"	"1611.88165"	"0.45"	"0.00036"	"7/82"	"7"	"82"	"734733.332458496"	"HCD"	"MS2"	"0"	"71.7"	"100.000"	"93.9628"	"33118"	"33118"	"33099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"139.8"	""	"101.8"	""	"123.4"	""	"65.1"	""	"103.6"	"145.2"	""	"916"	"49"	"36.000"	"29.000"	"0.000538103080162305"	"26"	"0"	"2.545E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELMNVk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"806.44592"	"1611.88457"	"1611.88165"	"1.81"	"0.00146"	"8/82"	"8"	"82"	"356163.721130371"	"HCD"	"MS2"	"0"	"37.2"	"100.000"	"93.6628"	"32996"	"32996"	"32980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.4"	""	"61.0"	""	"58.2"	""	"36.9"	"0.7"	"50.8"	"66.4"	""	"911"	"50"	"36.000"	"29.000"	"0.000424119637275597"	"20"	"0"	"4.511E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSDGITSVK"	"[K].eAFSDGITSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"806.45197"	"1611.89665"	"1611.89941"	"-1.71"	"-0.00138"	"10/96"	"10"	"96"	"121534.790039063"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"85.1790"	"29587"	"29587"	"29559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.8"	""	"16.0"	""	"13.6"	""	"14.9"	"2.5"	"19.7"	"15.5"	""	"860"	"29"	"36.000"	"29.000"	"0.0506370568613947"	"16"	"0.0007633"	"0.00749"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAFSDGITSVK"	"[K].eAFSDGITSVk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"806.45337"	"1611.89946"	"1611.89941"	"0.03"	"0.00003"	"11/96"	"11"	"96"	"133735.527709961"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"85.2198"	"29633"	"29633"	"29605"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"12.9"	""	"19.0"	""	"17.9"	""	"22.3"	"18.5"	""	"863"	"37"	"36.000"	"29.000"	"0.00944019140734231"	"19"	"0.0001686"	"0.001438"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLR"	"[R].aLGQNPTNAEVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P17209"	"Myosin light chain 4 OS=Rattus norvegicus OX=10116 GN=Myl4 PE=2 SV=2"	"P17209"	"Myosin light chain 4 OS=Rattus norvegicus OX=10116 GN=Myl4 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.45844"	"1611.90959"	"1611.90158"	"4.97"	"0.00400"	"4/120"	"4"	"120"	"96923.2919921875"	"HCD"	"MS2"	"100"	"6.3"	"100.000"	"60.5361"	"19600"	"19600"	"19572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.1"	""	"8.3"	""	"8.8"	""	"8.5"	""	"16.6"	"8.9"	""	"840"	"1"	"36.000"	"29.000"	"36.6647974723006"	"13"	"0.008893"	"0.1135"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGMPR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.89032"	"1612.77336"	"1612.77731"	"-2.45"	"-0.00197"	"11/134"	"11"	"134"	"329517.171936035"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"51.1821"	"15802"	"15802"	"15773"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.0"	""	"18.1"	""	"19.8"	""	"42.9"	"1.8"	"64.0"	"58.0"	""	"537"	"66"	"34.000"	"27.000"	"6.63657932936832E-06"	"17"	"0"	"1.5E-07"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGMPR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.9529"	"0.0000"	"1"	"1"	"1"	"806.89178"	"1612.77629"	"1612.77731"	"-0.63"	"-0.00051"	"13/134"	"13"	"134"	"661770.33581543"	"HCD"	"MS2"	"0"	"41.3"	"100.000"	"51.1047"	"15804"	"15804"	"15782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.8"	""	"20.2"	""	"24.3"	""	"84.9"	""	"126.2"	"105.4"	""	"561"	"85"	"34.000"	"27.000"	"8.25910268280553E-08"	"22"	"0"	"2.73E-11"	"2.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGMPR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.89221"	"1612.77715"	"1612.77731"	"-0.10"	"-0.00008"	"8/134"	"8"	"134"	"202976.997497559"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"50.8104"	"15684"	"15684"	"15655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"16.1"	""	"12.8"	""	"27.6"	"0.7"	"39.3"	"39.2"	""	"583"	"40"	"34.000"	"27.000"	"0.00288827511936242"	"15"	"0"	"3.325E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGMPR.[Q]"	"N-Term(TMT6plex)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.9405"	"0.0000"	"1"	"1"	"1"	"806.89258"	"1612.77788"	"1612.77731"	"0.35"	"0.00028"	"13/134"	"13"	"134"	"554774.322631836"	"HCD"	"MS2"	"0"	"38.1"	"100.000"	"51.4836"	"15921"	"15921"	"15901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"23.4"	""	"24.5"	""	"78.8"	""	"105.1"	"104.5"	""	"586"	"84"	"34.000"	"27.000"	"1.23272902116642E-07"	"23"	"0"	"1.703E-10"	"1.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTNEIYSGK"	"[R].eNTNEIYSGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.1892"	"0.0000"	"1"	"1"	"1"	"806.93109"	"1612.85491"	"1612.85827"	"-2.09"	"-0.00168"	"13/102"	"13"	"102"	"269856.040466309"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"46.7721"	"14044"	"14044"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.2"	""	"29.1"	""	"25.2"	""	"40.5"	""	"65.5"	"57.1"	""	"971"	"37"	"36.000"	"29.000"	"0.00925101178571156"	""	"9.9E-05"	"0.0004255"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENTNEIYSGK"	"[R].eNTNEIYSGk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.5957"	"0.0000"	"1"	"1"	"1"	"806.93237"	"1612.85747"	"1612.85827"	"-0.50"	"-0.00040"	"15/102"	"15"	"102"	"353044.107910156"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"47.1586"	"14163"	"14163"	"14142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.2"	""	"43.1"	""	"32.3"	""	"68.5"	""	"84.7"	"77.5"	""	"992"	"47"	"36.000"	"29.000"	"0.000980576941495484"	""	"0"	"4.469E-05"	"0.726"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.95245"	"1612.89763"	"1612.89868"	"-0.65"	"-0.00052"	"7/76"	"7"	"76"	"278716.040466309"	"HCD"	"MS2"	"6.539227"	"28.3"	"100.000"	"111.2059"	"39997"	"39997"	"39975"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"29.3"	""	"35.6"	""	"45.8"	"3.0"	"56.5"	"67.3"	""	"838"	"37"	"36.000"	"29.000"	"0.00923026188019399"	"15"	"0.0001686"	"0.001273"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"538.30420"	"1612.89804"	"1612.89868"	"-0.39"	"-0.00021"	"7/76"	"7"	"76"	"3893810.07550049"	"HCD"	"MS2"	"5.833658"	"107.0"	"100.000"	"110.9630"	"39898"	"39898"	"39879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.4"	""	"98.0"	""	"125.0"	""	"194.8"	"1.7"	"244.9"	"245.3"	""	"827"	"27"	"36.000"	"29.000"	"0.0777097503748151"	"21"	"0.001872"	"0.01542"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"538.30420"	"1612.89804"	"1612.89868"	"-0.39"	"-0.00021"	"6/76"	"6"	"76"	"3916675.67114258"	"HCD"	"MS2"	"4.950268"	"103.4"	"100.000"	"111.0580"	"39950"	"39950"	"39932"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"105.2"	""	"95.1"	""	"119.7"	""	"199.2"	""	"229.4"	"236.2"	""	"827"	"26"	"36.000"	"29.000"	"0.0953839962535748"	"21"	"0.0001686"	"0.00143"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"806.95282"	"1612.89836"	"1612.89868"	"-0.20"	"-0.00016"	"8/76"	"8"	"76"	"304965.428100586"	"HCD"	"MS2"	"0"	"28.6"	"100.000"	"111.2986"	"40048"	"40048"	"40028"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"32.8"	""	"35.3"	""	"51.9"	""	"65.5"	"60.4"	""	"827"	"41"	"36.000"	"29.000"	"0.00351136126427516"	"22"	"0"	"0.0001157"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.95294"	"1612.89861"	"1612.89868"	"-0.05"	"-0.00004"	"8/76"	"8"	"76"	"5307938.44848633"	"HCD"	"MS2"	"3.809968"	"459.8"	"100.000"	"110.9865"	"39921"	"39921"	"39900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"449.8"	""	"486.7"	""	"524.3"	""	"868.4"	""	"1036.7"	"1016.7"	""	"822"	"38"	"36.000"	"29.000"	"0.00722506605337023"	"15"	"0.0001686"	"0.001298"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEDENFILK"	"[K].fEDENFILk.[H]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"P10111"	"Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus OX=10116 GN=Ppia PE=1 SV=2"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"806.95367"	"1612.90007"	"1612.89868"	"0.86"	"0.00070"	"8/76"	"8"	"76"	"4697252.6786499"	"HCD"	"MS2"	"0"	"404.2"	"100.000"	"110.8821"	"39865"	"39865"	"39847"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"399.1"	""	"410.5"	""	"483.6"	""	"776.1"	"1.3"	"867.0"	"906.0"	""	"824"	"43"	"36.000"	"29.000"	"0.00199938862066794"	"22"	"0"	"0.0003178"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPLAEGVQEK"	"[R].lAPLAEGVQEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.32678"	"1612.96579"	"1612.96743"	"-1.01"	"-0.00055"	"10/92"	"10"	"92"	"1507863.98516846"	"HCD"	"MS2"	"17.7496"	"39.2"	"100.000"	"88.0839"	"30787"	"30787"	"30768"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.2"	""	"42.2"	""	"49.2"	""	"71.9"	""	"82.7"	"80.4"	""	"516"	"41"	"34.000"	"27.000"	"0.00190379291373308"	"15"	"0"	"4.921E-05"	"0.717"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPLAEGVQEK"	"[R].lAPLAEGVQEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.32684"	"1612.96598"	"1612.96743"	"-0.90"	"-0.00048"	"12/92"	"12"	"92"	"1572238.12817383"	"HCD"	"MS2"	"20.49087"	"40.5"	"100.000"	"88.1522"	"30776"	"30776"	"30760"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.1"	""	"43.0"	""	"47.5"	""	"68.1"	"1.5"	"88.7"	"81.9"	""	"514"	"32"	"34.000"	"27.000"	"0.0147888063895649"	"15"	"0"	"1.433E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPLAEGVQEK"	"[R].lAPLAEGVQEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"806.98700"	"1612.96672"	"1612.96743"	"-0.44"	"-0.00035"	"6/92"	"6"	"92"	"134869.645507813"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"87.8125"	"30642"	"30642"	"30617"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"10.4"	""	"10.2"	""	"20.8"	""	"16.2"	"15.7"	""	"520"	"32"	"34.000"	"27.000"	"0.0150998748555541"	"17"	"0.0001991"	"0.004607"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPLAEGVQEK"	"[R].lAPLAEGVQEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"806.98700"	"1612.96672"	"1612.96743"	"-0.44"	"-0.00035"	"10/92"	"10"	"92"	"325072.470703125"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"88.0991"	"30755"	"30755"	"30738"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"23.0"	""	"21.6"	""	"47.6"	""	"38.8"	"52.0"	""	"520"	"59"	"34.000"	"27.000"	"3.01976639598489E-05"	"21"	"0"	"2.783E-07"	"1.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPLAEGVQEK"	"[R].lAPLAEGVQEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.9194"	"0.0000"	"1"	"1"	"1"	"806.98706"	"1612.96684"	"1612.96743"	"-0.36"	"-0.00029"	"10/92"	"10"	"92"	"297586.868469238"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"88.0470"	"30772"	"30772"	"30752"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"21.8"	""	"18.8"	""	"43.9"	""	"37.9"	"45.2"	""	"520"	"62"	"34.000"	"27.000"	"1.54515961240049E-05"	"21"	"0"	"2.11E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAPLAEGVQEK"	"[R].lAPLAEGVQEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"P02651"	"Apolipoprotein A-IV OS=Rattus norvegicus OX=10116 GN=Apoa4 PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"806.98718"	"1612.96709"	"1612.96743"	"-0.21"	"-0.00017"	"7/92"	"7"	"92"	"140608.525756836"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"87.7401"	"30648"	"30648"	"30620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"13.3"	""	"12.1"	""	"19.7"	""	"14.9"	"22.6"	""	"520"	"27"	"34.000"	"27.000"	"0.0469865272762841"	"15"	"0.0001991"	"0.002613"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPVCTTELGR"	"[R].dFTPVcTTELGR.[A]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"538.60004"	"1613.78556"	"1613.78648"	"-0.57"	"-0.00031"	"11/104"	"11"	"104"	"503971.177062988"	"HCD"	"MS2"	"28.19344"	"10.5"	"100.000"	"107.1240"	"38439"	"38439"	"38424"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"16.4"	""	"16.0"	""	"13.8"	""	"17.5"	"19.0"	""	"599"	"18"	"34.000"	"27.000"	"0.510971675506436"	"14"	"0.0001991"	"0.001971"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPVCTTELGR"	"[R].dFTPVcTTELGR.[A]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"807.39703"	"1613.78679"	"1613.78648"	"0.19"	"0.00016"	"11/104"	"11"	"104"	"645252.652770996"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"107.2262"	"38480"	"38480"	"38468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.2"	""	"68.1"	""	"67.3"	""	"28.2"	"0.7"	"49.9"	"46.0"	""	"591"	"49"	"34.000"	"27.000"	"0.000404163867963574"	"18"	"0"	"0.0002112"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTPVCTTELGR"	"[R].dFTPVcTTELGR.[A]"	"N-Term(TMT6plex); C6(Methylthio)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9800"	"0.0000"	"1"	"1"	"1"	"807.39758"	"1613.78789"	"1613.78648"	"0.87"	"0.00070"	"10/104"	"10"	"104"	"589414.330444336"	"HCD"	"MS2"	"0"	"32.3"	"100.000"	"106.9679"	"38360"	"38360"	"38344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.0"	""	"57.7"	""	"65.6"	""	"23.7"	""	"40.8"	"44.9"	""	"589"	"50"	"34.000"	"27.000"	"0.000268587192190315"	"17"	"0"	"0.0001256"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.41278"	"1613.81828"	"1613.81949"	"-0.75"	"-0.00061"	"7/96"	"7"	"96"	"219040.780151367"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"100.6113"	"35841"	"35841"	"35817"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"8.9"	""	"12.9"	""	"27.6"	""	"15.4"	"18.6"	""	"795"	"43"	"35.000"	"29.000"	"0.00204332351504014"	"15"	"9.9E-05"	"0.0007011"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"538.61121"	"1613.81906"	"1613.81949"	"-0.27"	"-0.00014"	"6/96"	"6"	"96"	"1239356.0838623"	"HCD"	"MS2"	"29.67345"	"14.2"	"100.000"	"101.0339"	"36011"	"36011"	"36002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"13.7"	""	"14.8"	""	"36.4"	""	"24.2"	"32.4"	""	"779"	"27"	"35.000"	"28.000"	"0.0773583970310695"	"17"	"0.0001686"	"0.001743"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"538.61127"	"1613.81925"	"1613.81949"	"-0.15"	"-0.00008"	"6/96"	"6"	"96"	"1130916.22235107"	"HCD"	"MS2"	"26.02729"	"13.5"	"100.000"	"100.7501"	"35897"	"35897"	"35877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"12.8"	""	"16.9"	""	"33.2"	""	"25.0"	"28.9"	""	"777"	"42"	"35.000"	"28.000"	"0.00231414742761021"	"19"	"0.0001686"	"0.001314"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7674"	"0.0000"	"1"	"1"	"1"	"807.41345"	"1613.81963"	"1613.81949"	"0.08"	"0.00007"	"7/96"	"7"	"96"	"731765.672851563"	"HCD"	"MS2"	"1.899088"	"29.6"	"100.000"	"100.7853"	"35884"	"35884"	"35865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"24.9"	""	"31.1"	""	"95.5"	""	"45.6"	"55.5"	""	"797"	"43"	"36.000"	"29.000"	"0.00196529760876042"	"26"	"9.9E-05"	"0.0004699"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"538.61145"	"1613.81980"	"1613.81949"	"0.19"	"0.00010"	"5/96"	"5"	"96"	"1021142.07415771"	"HCD"	"MS2"	"12.34113"	"14.7"	"100.000"	"100.6750"	"35839"	"35839"	"35819"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.5"	""	"18.4"	""	"16.3"	""	"29.1"	""	"30.7"	"27.3"	""	"797"	"24"	"36.000"	"29.000"	"0.165740378281868"	"17"	"0.001615"	"0.01378"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7714"	"0.0000"	"1"	"1"	"1"	"807.41376"	"1613.82024"	"1613.81949"	"0.46"	"0.00037"	"7/96"	"7"	"96"	"358910.899536133"	"HCD"	"MS2"	"5.639045"	"19.0"	"100.000"	"101.0742"	"36000"	"36000"	"35986"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"16.1"	""	"23.1"	""	"52.9"	""	"32.7"	"38.4"	""	"791"	"35"	"35.000"	"28.000"	"0.0131870146247859"	"23"	"0.0001686"	"0.001915"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.41382"	"1613.82036"	"1613.81949"	"0.54"	"0.00043"	"4/96"	"4"	"96"	"203430.255432129"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"100.4947"	"35766"	"35766"	"35740"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"10.2"	""	"15.7"	""	"32.5"	""	"20.1"	"24.4"	""	"792"	"14"	"35.000"	"28.000"	"1.70488537754718"	"13"	"0.003818"	"0.04185"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"807.41400"	"1613.82073"	"1613.81949"	"0.76"	"0.00062"	"7/96"	"7"	"96"	"309358.333679199"	"HCD"	"MS2"	"6.719801"	"15.8"	"100.000"	"101.2164"	"36084"	"36084"	"36071"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"17.1"	""	"20.1"	""	"43.5"	""	"28.7"	"23.1"	""	"796"	"39"	"35.000"	"29.000"	"0.00562189942759856"	"24"	"9.9E-05"	"0.0004961"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLLEQDFPGMR"	"[R].yLLEQDFPGmR.[I]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"Q8R491"	"EH domain-containing protein 3 OS=Rattus norvegicus OX=10116 GN=Ehd3 PE=1 SV=2"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"807.41406"	"1613.82085"	"1613.81949"	"0.84"	"0.00068"	"7/96"	"7"	"96"	"697846.53729248"	"HCD"	"MS2"	"0"	"30.1"	"100.000"	"100.9186"	"35966"	"35966"	"35953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"25.0"	""	"34.2"	""	"91.9"	""	"55.9"	"47.8"	""	"796"	"42"	"35.000"	"29.000"	"0.00264169742019959"	"25"	"0.0001686"	"0.001713"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].SSPAITLENPDIk.[Y]"	"K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"807.44989"	"1613.89250"	"1613.89477"	"-1.40"	"-0.00113"	"4/124"	"4"	"124"	"65573.6472167969"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"80.8521"	"27841"	"27841"	"27814"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.4"	""	"3.5"	""	"7.5"	""	"6.8"	""	"8.8"	"8.6"	""	"858"	"15"	"36.000"	"29.000"	"1.38183851146059"	"21"	"0.008289"	"0.1054"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].SSPAITLENPDIk.[Y]"	"K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.45123"	"1613.89519"	"1613.89477"	"0.26"	"0.00021"	"4/124"	"4"	"124"	"106140.20501709"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"80.7089"	"27810"	"27810"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"8.0"	""	"9.0"	""	"7.9"	""	"10.1"	"13.2"	""	"840"	"12"	"36.000"	"29.000"	"2.62572530965788"	"13"	"0.006074"	"0.07443"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDIIGVEGNPGKTK"	"[R].gDIIGVEGNPGKTK.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"Q5XIM7"	"Lysine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Kars PE=1 SV=1"	"1"	"2"	"2"	"0.1220"	"0.0000"	"1"	"1"	"1"	"807.46570"	"1613.92412"	"1613.90600"	"11.23"	"0.00906"	"7/136"	"7"	"136"	"178847.762817383"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"72.7084"	"24536"	"24536"	"24509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"18.6"	""	"16.5"	""	"26.1"	""	"31.5"	"19.9"	""	"812"	"41"	"36.000"	"29.000"	"0.00296842467894268"	""	"0.0001991"	"0.004565"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"807.93860"	"1614.86992"	"1614.87226"	"-1.45"	"-0.00117"	"8/114"	"8"	"114"	"331886.380004883"	"HCD"	"MS2"	"17.86943"	"15.1"	"100.000"	"105.5118"	"37799"	"37799"	"37777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"22.2"	""	"22.2"	""	"16.4"	""	"29.7"	"31.9"	""	"960"	"66"	"36.000"	"29.000"	"1.08702926764467E-05"	"19"	"0"	"3.095E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"807.93884"	"1614.87041"	"1614.87226"	"-1.15"	"-0.00092"	"12/114"	"12"	"114"	"435783.533203125"	"HCD"	"MS2"	"41.46442"	"18.7"	"100.000"	"105.2621"	"37681"	"37681"	"37660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"21.8"	""	"27.3"	""	"24.4"	""	"37.4"	"39.6"	""	"954"	"36"	"36.000"	"29.000"	"0.0128386210147314"	"23"	"0"	"0.0001584"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7344"	"0.0000"	"1"	"1"	"1"	"538.96228"	"1614.87229"	"1614.87226"	"0.02"	"0.00001"	"13/114"	"13"	"114"	"616138.189453125"	"HCD"	"MS2"	"23.19983"	"8.1"	"100.000"	"105.3401"	"37713"	"37713"	"37690"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.9"	""	"10.0"	""	"15.2"	""	"12.7"	""	"16.0"	"15.9"	""	"949"	"64"	"36.000"	"29.000"	"2.10492301545465E-05"	""	"0"	"1.825E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"807.93982"	"1614.87236"	"1614.87226"	"0.06"	"0.00005"	"16/114"	"16"	"114"	"575495.92175293"	"HCD"	"MS2"	"3.711473"	"22.4"	"100.000"	"105.5458"	"37795"	"37795"	"37785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"28.2"	""	"33.4"	""	"24.4"	""	"41.4"	"47.7"	""	"949"	"63"	"36.000"	"29.000"	"2.5955907439319E-05"	"24"	"0"	"3.211E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].iMNVIGEPIDER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"807.94000"	"1614.87273"	"1614.87226"	"0.29"	"0.00023"	"15/114"	"15"	"114"	"535535.716003418"	"HCD"	"MS2"	"3.601426"	"22.8"	"100.000"	"105.8049"	"37917"	"37917"	"37901"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.8"	""	"38.6"	""	"29.9"	""	"28.0"	""	"46.2"	"44.1"	""	"949"	"59"	"36.000"	"29.000"	"5.93247909838308E-05"	"25"	"0"	"2.313E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASLEVENQNLR"	"[R].iASLEVENQNLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"807.95374"	"1614.90019"	"1614.90125"	"-0.65"	"-0.00053"	"7/104"	"7"	"104"	"216599.648681641"	"HCD"	"MS2"	"7.902219"	"14.5"	"100.000"	"83.5061"	"28912"	"28912"	"28896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.9"	""	"11.9"	""	"22.5"	""	"27.5"	""	"29.2"	"22.0"	""	"963"	"35"	"36.000"	"29.000"	"0.0141122509758803"	"20"	"0"	"7.829E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASLEVENQNLR"	"[R].iASLEVENQNLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"807.95398"	"1614.90068"	"1614.90125"	"-0.35"	"-0.00028"	"7/104"	"7"	"104"	"238227.305358887"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"83.4477"	"28917"	"28917"	"28894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.5"	""	"16.0"	""	"26.9"	""	"26.0"	""	"24.8"	"23.6"	""	"982"	"31"	"36.000"	"29.000"	"0.0398181879406236"	"15"	"0"	"3.541E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGYDSVFSVVR"	"[R].eEGYDSVFSVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"808.41113"	"1615.81499"	"1615.81652"	"-0.95"	"-0.00076"	"4/104"	"4"	"104"	"105298.250854492"	"HCD"	"MS2"	"24.09155"	"8.9"	"100.000"	"101.8256"	"36330"	"36330"	"36309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"8.6"	""	"11.3"	""	"19.0"	""	"19.0"	"18.6"	""	"776"	"19"	"35.000"	"28.000"	"0.463267384532138"	"18"	"0.003786"	"0.04039"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEGYDSVFSVVR"	"[R].eEGYDSVFSVVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.41278"	"1615.81828"	"1615.81652"	"1.09"	"0.00088"	"5/104"	"5"	"104"	"154870.426940918"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"101.6781"	"36245"	"36245"	"36220"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.6"	""	"16.4"	""	"18.3"	""	"21.3"	""	"23.7"	"22.6"	""	"797"	"11"	"36.000"	"29.000"	"3.09334475976534"	"13"	"0.007717"	"0.09825"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEGDIALLK"	"[R].aLDEGDIALLk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"539.32678"	"1615.96579"	"1615.96709"	"-0.80"	"-0.00043"	"10/86"	"10"	"86"	"1056802.99224854"	"HCD"	"MS2"	"31.23277"	"31.2"	"100.000"	"110.8314"	"39858"	"39858"	"39836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.1"	""	"41.9"	""	"43.9"	""	"50.4"	""	"57.8"	"61.7"	""	"618"	"31"	"34.000"	"27.000"	"0.0261793270969444"	"17"	"0"	"6.29E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEGDIALLK"	"[R].aLDEGDIALLk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"539.32684"	"1615.96598"	"1615.96709"	"-0.69"	"-0.00037"	"11/86"	"11"	"86"	"789673.801940918"	"HCD"	"MS2"	"20.49967"	"25.2"	"100.000"	"110.7388"	"39807"	"39807"	"39783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.7"	""	"28.6"	""	"37.0"	""	"42.7"	"1.0"	"39.1"	"57.3"	""	"618"	"27"	"34.000"	"27.000"	"0.0555851112774796"	"16"	"0"	"9.628E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEGDIALLK"	"[R].aLDEGDIALLk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"808.48694"	"1615.96660"	"1615.96709"	"-0.31"	"-0.00025"	"10/86"	"10"	"86"	"604262.919616699"	"HCD"	"MS2"	"13.20021"	"51.9"	"100.000"	"110.7040"	"39793"	"39793"	"39767"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.8"	""	"64.0"	""	"66.9"	""	"84.6"	""	"99.9"	"96.0"	""	"628"	"77"	"34.000"	"27.000"	"6.29404216592659E-07"	"25"	"0"	"3.231E-07"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDEGDIALLK"	"[R].aLDEGDIALLk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"2"	"2"	"0.7576"	"0.0000"	"1"	"1"	"1"	"808.48712"	"1615.96697"	"1615.96709"	"-0.08"	"-0.00006"	"8/86"	"8"	"86"	"457543.982116699"	"HCD"	"MS2"	"0"	"40.9"	"100.000"	"110.8013"	"39846"	"39846"	"39820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.6"	""	"50.5"	""	"63.2"	""	"68.3"	""	"70.6"	"67.6"	""	"628"	"33"	"34.000"	"27.000"	"0.0170580604088624"	"22"	"0.0001686"	"0.001472"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REDIFYTSK"	"[KR].rEDIFYTSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652; Q6AYQ2"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1"	"1"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"539.63818"	"1616.90000"	"1616.90483"	"-2.99"	"-0.00161"	"5/92"	"5"	"92"	"1071100.86187744"	"HCD"	"MS2"	"14.08608"	"41.9"	"100.000"	"57.8681"	"18513"	"18513"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.2"	""	"60.5"	""	"67.1"	""	"55.7"	"0.6"	"69.7"	"69.2"	""	"1020"	"23"	"37.000"	"30.000"	"0.252679597310443"	"19"	"0.0001991"	"0.003611"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REDIFYTSK"	"[KR].rEDIFYTSk.[L]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"3"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457; P51652; Q6AYQ2"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1; Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus OX=10116 GN=Akr1c18 PE=1 SV=1; Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus OX=10116 GN=Akr1c21 PE=2 SV=1"	"1"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"539.63843"	"1616.90073"	"1616.90483"	"-2.53"	"-0.00137"	"5/92"	"5"	"92"	"320520.136901855"	"HCD"	"MS2"	"43.14142"	"18.0"	"100.000"	"57.8427"	"18538"	"18538"	"18514"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.2"	""	"21.9"	""	"24.1"	""	"24.3"	""	"36.4"	"38.2"	""	"1015"	"13"	"37.000"	"30.000"	"2.70667459459968"	"17"	"0.008135"	"0.1044"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.5600"	"0.0000"	"1"	"1"	"1"	"808.96112"	"1616.91496"	"1616.91472"	"0.15"	"0.00012"	"10/84"	"10"	"84"	"203936.633789063"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"95.5258"	"33786"	"33786"	"33761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"17.2"	""	"20.4"	""	"35.6"	""	"34.1"	"30.9"	""	"960"	"25"	"36.000"	"29.000"	"0.155683016327688"	"25"	"0.0001991"	"0.004741"	"0.309"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"539.64325"	"1616.91520"	"1616.91472"	"0.29"	"0.00016"	"10/84"	"10"	"84"	"498862.14440918"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"95.5929"	"33813"	"33813"	"33791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"25.7"	""	"21.0"	""	"43.9"	""	"44.9"	"35.5"	""	"960"	"23"	"36.000"	"29.000"	"0.253653720852086"	"23"	"0.0007633"	"0.007293"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"539.64331"	"1616.91538"	"1616.91472"	"0.40"	"0.00022"	"12/84"	"12"	"84"	"782227.782836914"	"HCD"	"MS2"	"9.781127"	"27.4"	"100.000"	"95.6438"	"33801"	"33801"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.6"	""	"23.0"	""	"33.3"	""	"59.3"	""	"58.7"	"51.9"	""	"945"	"39"	"36.000"	"29.000"	"0.00582642033700659"	""	"0"	"5.973E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDIDPEETVK"	"[K].iDIDPEETVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"Q4KMA2"	"UV excision repair protein RAD23 homolog B OS=Rattus norvegicus OX=10116 GN=Rad23b PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"808.96191"	"1616.91655"	"1616.91472"	"1.13"	"0.00091"	"9/84"	"9"	"84"	"188306.528869629"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"95.5030"	"33744"	"33744"	"33724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.8"	""	"17.9"	""	"17.8"	""	"28.9"	""	"32.7"	"35.9"	""	"970"	"28"	"36.000"	"29.000"	"0.0860481898231729"	"22"	"0.0001991"	"0.004236"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEVLGEEK"	"[R].nLQEVLGEEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"539.64636"	"1616.92453"	"1616.92596"	"-0.88"	"-0.00047"	"10/100"	"10"	"100"	"469048.45300293"	"HCD"	"MS2"	"45.21891"	"14.8"	"100.000"	"95.0233"	"33582"	"33582"	"33562"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.7"	""	"21.0"	""	"17.0"	""	"24.4"	""	"27.0"	"28.1"	""	"897"	"25"	"36.000"	"29.000"	"0.149541746124311"	"16"	"9.9E-05"	"0.0009878"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEVLGEEK"	"[R].nLQEVLGEEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"808.96710"	"1616.92693"	"1616.92596"	"0.60"	"0.00048"	"6/100"	"6"	"100"	"156848.674438477"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"94.8661"	"33519"	"33519"	"33496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.3"	""	"14.1"	""	"21.5"	""	"17.1"	""	"25.6"	"23.9"	""	"873"	"34"	"36.000"	"29.000"	"0.0175785985483063"	"15"	"0.0001686"	"0.001074"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEVLGEEK"	"[R].nLQEVLGEEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"808.96716"	"1616.92705"	"1616.92596"	"0.68"	"0.00055"	"11/100"	"11"	"100"	"166695.028869629"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"94.8944"	"33497"	"33497"	"33474"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.7"	""	"18.0"	""	"24.3"	""	"27.7"	""	"27.5"	"29.9"	""	"873"	"36"	"36.000"	"29.000"	"0.0113496964932164"	"17"	"0.0001686"	"0.001681"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEVLGEEK"	"[R].nLQEVLGEEk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"539.64734"	"1616.92746"	"1616.92596"	"0.93"	"0.00050"	"12/100"	"12"	"100"	"541908.262756348"	"HCD"	"MS2"	"26.84292"	"18.2"	"100.000"	"94.9567"	"33522"	"33522"	"33500"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"24.0"	""	"26.2"	""	"32.2"	""	"32.1"	"30.7"	""	"881"	"35"	"36.000"	"29.000"	"0.0139941302812123"	"21"	"9.9E-05"	"0.0004222"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAQGVSGAVQDK"	"[K].vAQGVSGAVQDk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"E9PU28"	"Inosine-5'-monophosphate dehydrogenase 2 OS=Rattus norvegicus OX=10116 GN=Impdh2 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"808.97144"	"1616.93559"	"1616.93719"	"-0.99"	"-0.00080"	"8/116"	"8"	"116"	"140831.290283203"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"52.8160"	"16497"	"16497"	"16466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"16.4"	""	"11.8"	""	"20.5"	""	"22.1"	"12.5"	""	"887"	"14"	"36.000"	"29.000"	"1.92705284420092"	"17"	"0.003568"	"0.03961"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQTLVQDNVK"	"[R].nQTLVQDNVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"808.97192"	"1616.93657"	"1616.93719"	"-0.38"	"-0.00031"	"5/98"	"5"	"98"	"92368.6470336914"	"HCD"	"MS2"	"100"	"10.0"	"100.000"	"49.6163"	"15198"	"15198"	"15173"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"8.3"	""	"6.4"	""	"18.8"	""	"30.5"	"19.5"	""	"885"	"8"	"36.000"	"29.000"	"7.58426108572478"	"16"	"0.004234"	"0.04852"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQTLVQDNVK"	"[R].nQTLVQDNVk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"P29975"	"Aquaporin-1 OS=Rattus norvegicus OX=10116 GN=Aqp1 PE=1 SV=4"	"0"	"2"	"2"	"0.5152"	"0.0000"	"1"	"1"	"1"	"808.97211"	"1616.93694"	"1616.93719"	"-0.16"	"-0.00013"	"11/98"	"11"	"98"	"126299.673278809"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"50.0064"	"15322"	"15322"	"15292"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"8.2"	""	"7.7"	""	"17.3"	""	"25.8"	"18.0"	""	"885"	"33"	"36.000"	"29.000"	"0.0243732405659391"	""	"9.9E-05"	"0.000496"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEYLQPNPASR"	"[KR].tIEYLQPNPASR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35179; O35964"	"Endophilin-A1 OS=Rattus norvegicus OX=10116 GN=Sh3gl2 PE=1 SV=2; Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7561"	"0.0000"	"1"	"1"	"1"	"809.44373"	"1617.88017"	"1617.87979"	"0.24"	"0.00019"	"9/120"	"9"	"120"	"265102.447753906"	"HCD"	"MS2"	"16.63144"	"17.2"	"100.000"	"71.1629"	"23942"	"23942"	"23916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"18.9"	""	"22.3"	""	"26.1"	""	"31.4"	"38.3"	""	"1091"	"41"	"37.000"	"30.000"	"0.00468591875981193"	"25"	"0"	"6.444E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TIEYLQPNPASR"	"[KR].tIEYLQPNPASR.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"O35964"	"Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"O35179; O35964"	"Endophilin-A1 OS=Rattus norvegicus OX=10116 GN=Sh3gl2 PE=1 SV=2; Endophilin-A2 OS=Rattus norvegicus OX=10116 GN=Sh3gl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"809.44415"	"1617.88103"	"1617.87979"	"0.77"	"0.00062"	"9/120"	"9"	"120"	"281121.478515625"	"HCD"	"MS2"	"12.5377"	"19.1"	"100.000"	"71.0503"	"23865"	"23865"	"23838"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"20.6"	""	"29.5"	""	"30.7"	""	"32.7"	"36.2"	""	"1077"	"35"	"37.000"	"30.000"	"0.0157103444703963"	"24"	"0"	"0.0002706"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAGRPLELSDFR"	"[K].gAAGRPLELSDFR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.96771"	"1617.88858"	"1617.89102"	"-1.51"	"-0.00081"	"10/118"	"10"	"118"	"1840638.52819824"	"HCD"	"MS2"	"18.10351"	"66.8"	"100.000"	"66.1036"	"21860"	"21860"	"21833"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.8"	""	"92.4"	""	"85.2"	""	"115.6"	"1.6"	"123.1"	"129.3"	""	"1069"	"18"	"37.000"	"30.000"	"0.84517707699002"	"14"	"9.9E-05"	"0.0004342"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQAAVLHVDQTA"	"[K].hVQAAVLHVDQTA.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"539.96832"	"1617.89042"	"1617.89102"	"-0.37"	"-0.00020"	"7/116"	"7"	"116"	"4145403.6494751"	"HCD"	"MS2"	"10.6421"	"135.1"	"100.000"	"44.3618"	"13068"	"13068"	"13053"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"150.2"	""	"163.7"	""	"176.1"	""	"255.4"	""	"285.9"	"251.3"	""	"1110"	"22"	"37.000"	"30.000"	"0.365000099732259"	"14"	"0.0001686"	"0.001748"	"0.398"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLLGGLDTEASR"	"[R].gSLLLGGLDTEASR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.4667"	"0.0000"	"1"	"1"	"1"	"809.45471"	"1617.90215"	"1617.90092"	"0.76"	"0.00062"	"7/126"	"7"	"126"	"101309.202575684"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"102.3773"	"36552"	"36552"	"36531"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"5.3"	""	"6.1"	""	"8.6"	""	"13.3"	"14.1"	""	"1078"	"15"	"37.000"	"30.000"	"1.7441698108507"	"22"	"0.001951"	"0.01692"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSLLLGGLDTEASR"	"[R].gSLLLGGLDTEASR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"2"	"2"	"0.6207"	"0.0000"	"1"	"1"	"1"	"809.45551"	"1617.90373"	"1617.90092"	"1.74"	"0.00141"	"11/126"	"11"	"126"	"120608.600036621"	"HCD"	"MS2"	"18.89599"	"8.0"	"100.000"	"102.2316"	"36470"	"36470"	"36443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"12.0"	""	"9.4"	""	"16.0"	""	"14.1"	"13.9"	""	"1060"	"29"	"37.000"	"30.000"	"0.0600172192514845"	"25"	"0.0001686"	"0.001086"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEGVLIVHEHR"	"[R].tVEGVLIVHEHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"0"	"4"	"4"	"0.8413"	"0.0000"	"1"	"1"	"1"	"405.23672"	"1617.92507"	"1617.92741"	"-1.44"	"-0.00058"	"11/106"	"11"	"106"	"1998619.17498779"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"45.0100"	"13296"	"13296"	"13274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.7"	""	"36.3"	""	"37.0"	""	"52.7"	""	"71.6"	"62.2"	""	"991"	"63"	"36.000"	"29.000"	"2.22865918099624E-05"	"27"	"0"	"0.0001461"	"0.62"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVEGVLIVHEHR"	"[R].tVEGVLIVHEHR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"Q4KM65"	"Cleavage and polyadenylation specificity factor subunit 5 OS=Rattus norvegicus OX=10116 GN=Nudt21 PE=2 SV=1"	"0"	"4"	"4"	"0.8413"	"0.0000"	"1"	"1"	"1"	"405.23730"	"1617.92739"	"1617.92741"	"-0.01"	"0.00000"	"11/106"	"11"	"106"	"1694545.96636963"	"HCD"	"MS2"	"35.39519"	"29.7"	"100.000"	"44.6848"	"13198"	"13198"	"13174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"36.3"	""	"33.8"	""	"51.7"	""	"66.9"	"58.7"	""	"1039"	"63"	"37.000"	"30.000"	"2.79631152017212E-05"	"27"	"0"	"0.0002607"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"539.98663"	"1617.94535"	"1617.94636"	"-0.63"	"-0.00034"	"10/94"	"10"	"94"	"318616.065673828"	"HCD"	"MS2"	"20.21529"	"11.7"	"100.000"	"97.0633"	"34376"	"34376"	"34349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"12.9"	""	"13.1"	""	"19.5"	""	"26.2"	"21.8"	""	"876"	"21"	"36.000"	"29.000"	"0.366837825571575"	"20"	"0.0001991"	"0.005372"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.7568"	"0.0000"	"1"	"1"	"1"	"539.98669"	"1617.94553"	"1617.94636"	"-0.51"	"-0.00028"	"7/94"	"7"	"94"	"1235394.83734131"	"HCD"	"MS2"	"19.85657"	"38.0"	"100.000"	"96.7288"	"34240"	"34240"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.0"	""	"46.8"	""	"46.0"	""	"69.5"	"0.6"	"76.2"	"78.6"	""	"892"	"37"	"36.000"	"29.000"	"0.00936127188096091"	"24"	"0"	"1.596E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"539.98676"	"1617.94571"	"1617.94636"	"-0.40"	"-0.00022"	"10/94"	"10"	"94"	"1113225.17736816"	"HCD"	"MS2"	"21.03208"	"33.8"	"100.000"	"96.7682"	"34287"	"34287"	"34263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"38.4"	""	"37.7"	""	"62.1"	"0.2"	"71.6"	"63.3"	""	"893"	"37"	"36.000"	"29.000"	"0.00924318112235199"	"24"	"0"	"1.684E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"809.47656"	"1617.94585"	"1617.94636"	"-0.32"	"-0.00026"	"10/94"	"10"	"94"	"266973.612487793"	"HCD"	"MS2"	"6.364922"	"24.4"	"100.000"	"96.9692"	"34337"	"34337"	"34322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"23.3"	""	"27.3"	""	"48.7"	"0.2"	"48.4"	"55.5"	""	"890"	"31"	"36.000"	"29.000"	"0.0329883057378908"	"27"	"0.002588"	"0.02714"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.7966"	"0.0000"	"1"	"1"	"1"	"809.47675"	"1617.94621"	"1617.94636"	"-0.09"	"-0.00007"	"16/94"	"16"	"94"	"510829.970336914"	"HCD"	"MS2"	"16.77482"	"41.4"	"100.000"	"96.7592"	"34283"	"34283"	"34263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.9"	""	"42.4"	""	"44.0"	""	"73.7"	""	"90.8"	"94.3"	""	"890"	"59"	"36.000"	"29.000"	"5.89331983161626E-05"	"28"	"0"	"5.873E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"539.98706"	"1617.94663"	"1617.94636"	"0.17"	"0.00009"	"8/94"	"8"	"94"	"403275.266296387"	"HCD"	"MS2"	"13.39332"	"14.5"	"100.000"	"97.0707"	"34409"	"34409"	"34394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"15.5"	""	"17.1"	""	"22.4"	""	"33.2"	"30.3"	""	"890"	"23"	"36.000"	"29.000"	"0.247947658274709"	"22"	"0.0001991"	"0.00281"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADDPSLSLIK"	"[K].tADDPSLSLIk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"Q641Y0"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit OS=Rattus norvegicus OX=10116 GN=Ddost PE=2 SV=1"	"0"	"2"	"2"	"0.7600"	"0.0000"	"1"	"1"	"1"	"809.47736"	"1617.94744"	"1617.94636"	"0.67"	"0.00054"	"12/94"	"12"	"94"	"313869.557739258"	"HCD"	"MS2"	"10.03737"	"27.0"	"100.000"	"96.6480"	"34208"	"34208"	"34194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"29.5"	""	"29.9"	""	"55.7"	""	"52.3"	"61.7"	""	"884"	"25"	"36.000"	"29.000"	"0.145352420847185"	"20"	"0.0001991"	"0.004541"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISDEDWDIIQR"	"[R].iSDEDWDIIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"809.91699"	"1618.82671"	"1618.82742"	"-0.44"	"-0.00035"	"8/92"	"8"	"92"	"101729.005615234"	"HCD"	"MS2"	"23.03609"	"5.8"	"100.000"	"107.5205"	"38593"	"38593"	"38581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"6.3"	""	"6.9"	""	"8.4"	""	"11.9"	"11.9"	""	"819"	"13"	"36.000"	"29.000"	"1.83761237177618"	"21"	"0.007178"	"0.09189"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISDEDWDIIQR"	"[R].iSDEDWDIIQR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"P97852"	"Peroxisomal multifunctional enzyme type 2 OS=Rattus norvegicus OX=10116 GN=Hsd17b4 PE=1 SV=3"	"0"	"2"	"2"	"0.5333"	"0.0000"	"1"	"1"	"1"	"809.91711"	"1618.82695"	"1618.82742"	"-0.29"	"-0.00023"	"4/92"	"4"	"92"	"109902.132324219"	"HCD"	"MS2"	"18.28251"	"6.3"	"100.000"	"107.2393"	"38465"	"38465"	"38450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.4"	""	"8.7"	""	"4.5"	""	"11.4"	""	"11.9"	"13.2"	""	"805"	"15"	"36.000"	"29.000"	"1.24671126793467"	"20"	"0.002525"	"0.02377"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"809.94092"	"1618.87456"	"1618.87504"	"-0.29"	"-0.00024"	"7/126"	"7"	"126"	"255883.371032715"	"HCD"	"MS2"	"100"	"16.3"	"100.000"	"64.7926"	"21359"	"21359"	"21337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"27.9"	""	"25.3"	""	"21.3"	""	"28.4"	"27.0"	""	"1109"	"17"	"37.000"	"30.000"	"0.988329026549966"	"21"	"0.002373"	"0.02262"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"809.94098"	"1618.87468"	"1618.87504"	"-0.22"	"-0.00018"	"9/126"	"9"	"126"	"289341.026611328"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"64.8029"	"21329"	"21329"	"21311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"28.3"	""	"26.5"	""	"22.6"	""	"30.2"	"26.8"	""	"1109"	"48"	"37.000"	"30.000"	"0.000922362314630259"	"17"	"0"	"5.035E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"809.94098"	"1618.87468"	"1618.87504"	"-0.22"	"-0.00018"	"10/126"	"10"	"126"	"1103011.23443604"	"HCD"	"MS2"	"0"	"50.9"	"100.000"	"65.0961"	"21482"	"21482"	"21463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.7"	""	"85.8"	""	"75.3"	""	"64.6"	""	"92.2"	"85.7"	""	"1109"	"63"	"37.000"	"30.000"	"2.76631448296576E-05"	"21"	"0"	"8.091E-08"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8871"	"0.0000"	"1"	"1"	"1"	"809.94110"	"1618.87493"	"1618.87504"	"-0.07"	"-0.00005"	"11/126"	"11"	"126"	"1084643.68225098"	"HCD"	"MS2"	"0"	"54.0"	"100.000"	"65.1225"	"21459"	"21459"	"21441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.3"	""	"74.8"	""	"77.6"	""	"68.3"	"2.1"	"95.6"	"101.9"	""	"1109"	"62"	"37.000"	"30.000"	"3.21293212168706E-05"	"23"	"0"	"3.032E-08"	"1.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"809.94141"	"1618.87554"	"1618.87504"	"0.31"	"0.00025"	"7/126"	"7"	"126"	"142174.302062988"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"65.4426"	"21590"	"21590"	"21567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"13.6"	""	"12.6"	""	"12.4"	"1.1"	"20.5"	"21.3"	""	"1107"	"35"	"37.000"	"30.000"	"0.0162598908236071"	"16"	"9.9E-05"	"0.0004046"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQNTGVADGYPVR"	"[K].lQNTGVADGYPVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"809.94159"	"1618.87590"	"1618.87504"	"0.54"	"0.00043"	"6/126"	"6"	"126"	"275972.982177734"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"65.4000"	"21606"	"21606"	"21584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"24.5"	""	"23.1"	""	"22.6"	""	"29.3"	"29.2"	""	"1087"	"38"	"37.000"	"30.000"	"0.00826417582409612"	"19"	"0"	"1.352E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAEGAVLDEAK"	"[K].tGAEGAVLDEAk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9; Q6QLM7"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1; Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"809.95361"	"1618.89995"	"1618.90522"	"-3.26"	"-0.00264"	"12/106"	"12"	"106"	"211531.640258789"	"HCD"	"MS2"	"0"	"21.4"	"100.000"	"64.1519"	"21098"	"21098"	"21081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.7"	""	"26.2"	""	"29.0"	""	"39.3"	"1.1"	"39.3"	"36.0"	""	"1042"	"50"	"37.000"	"30.000"	"0.000523404826735045"	"23"	"0"	"6.568E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAEGAVLDEAK"	"[K].tGAEGAVLDEAk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q2PQA9"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1"	"Q2PQA9; Q6QLM7"	"Kinesin-1 heavy chain OS=Rattus norvegicus OX=10116 GN=Kif5b PE=1 SV=1; Kinesin heavy chain isoform 5A OS=Rattus norvegicus OX=10116 GN=Kif5a PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"809.95471"	"1618.90215"	"1618.90522"	"-1.90"	"-0.00154"	"14/106"	"14"	"106"	"222243.143249512"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"64.0845"	"21039"	"21039"	"21014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.7"	""	"21.3"	""	"21.1"	""	"29.1"	""	"41.5"	"38.4"	""	"1028"	"54"	"37.000"	"30.000"	"0.000207473731985349"	"20"	"0"	"4.874E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"540.61328"	"1619.82529"	"1619.82604"	"-0.46"	"-0.00025"	"11/118"	"11"	"118"	"1031538.41845703"	"HCD"	"MS2"	"32.84822"	"16.8"	"100.000"	"85.1609"	"29579"	"29579"	"29559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.7"	""	"23.2"	""	"23.5"	""	"33.6"	""	"20.8"	"29.2"	""	"895"	"46"	"36.000"	"29.000"	"0.00100877204743821"	"23"	"0"	"1.705E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"810.41644"	"1619.82561"	"1619.82604"	"-0.26"	"-0.00021"	"8/118"	"8"	"118"	"440530.985290527"	"HCD"	"MS2"	"0"	"25.5"	"100.000"	"85.4550"	"29728"	"29728"	"29713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.4"	""	"30.1"	""	"37.4"	""	"29.5"	"0.4"	"45.2"	"56.3"	""	"897"	"68"	"36.000"	"29.000"	"7.93893867805364E-06"	"21"	"0"	"6.783E-07"	"1.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"810.41681"	"1619.82634"	"1619.82604"	"0.19"	"0.00015"	"11/118"	"11"	"118"	"279845.84387207"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"85.5108"	"29721"	"29721"	"29705"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"23.9"	""	"24.8"	""	"22.8"	""	"39.6"	"37.7"	""	"894"	"48"	"36.000"	"29.000"	"0.000634318712195025"	"25"	"0"	"8.318E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"540.61371"	"1619.82657"	"1619.82604"	"0.33"	"0.00018"	"14/118"	"14"	"118"	"1096479.18200684"	"HCD"	"MS2"	"33.75061"	"15.9"	"100.000"	"85.1599"	"29608"	"29608"	"29589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"24.4"	""	"21.3"	""	"24.7"	""	"24.2"	"31.5"	""	"894"	"37"	"36.000"	"29.000"	"0.00936068267765349"	"23"	"0"	"0.0001049"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"810.41693"	"1619.82659"	"1619.82604"	"0.34"	"0.00027"	"11/118"	"11"	"118"	"1297657.02545166"	"HCD"	"MS2"	"0"	"61.7"	"100.000"	"85.2001"	"29595"	"29595"	"29575"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.8"	""	"78.1"	""	"84.3"	""	"72.0"	"0.8"	"115.0"	"126.3"	""	"894"	"62"	"36.000"	"29.000"	"2.9194935703342E-05"	"26"	"0"	"1.922E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"810.41772"	"1619.82817"	"1619.82604"	"1.32"	"0.00107"	"7/118"	"7"	"118"	"1048855.31738281"	"HCD"	"MS2"	"0"	"48.8"	"100.000"	"85.1532"	"29606"	"29606"	"29589"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.5"	""	"60.4"	""	"74.0"	""	"50.2"	"0.7"	"107.1"	"86.1"	""	"923"	"64"	"36.000"	"29.000"	"1.76673619040714E-05"	"25"	"0"	"2.108E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAMDTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.41785"	"1619.82842"	"1619.82604"	"1.47"	"0.00119"	"6/118"	"6"	"118"	"145190.554321289"	"HCD"	"MS2"	"17.85544"	"9.5"	"100.000"	"84.8508"	"29483"	"29483"	"29465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"14.7"	""	"10.2"	""	"14.0"	""	"18.9"	"20.8"	""	"918"	"41"	"36.000"	"29.000"	"0.00408143313096798"	"15"	"0"	"0.0002659"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPMELNSK"	"[R].lDVPmELNSk.[G]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"540.64063"	"1619.90732"	"1619.90787"	"-0.34"	"-0.00018"	"8/90"	"8"	"90"	"331664.614501953"	"HCD"	"MS2"	"33.30636"	"13.6"	"100.000"	"91.1666"	"31990"	"31990"	"31966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"14.7"	""	"17.6"	""	"31.6"	""	"24.2"	"29.1"	""	"1061"	"23"	"37.000"	"30.000"	"0.288194300856736"	"18"	"0.001453"	"0.01161"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDVPMELNSK"	"[R].lDVPmELNSk.[G]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.6207"	"0.0000"	"1"	"1"	"1"	"540.64099"	"1619.90842"	"1619.90787"	"0.34"	"0.00019"	"9/90"	"9"	"90"	"310443.122192383"	"HCD"	"MS2"	"21.23266"	"13.2"	"100.000"	"91.0642"	"31986"	"31986"	"31967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"13.1"	""	"16.2"	""	"25.8"	""	"30.3"	"25.3"	""	"1022"	"29"	"37.000"	"30.000"	"0.0575997900105686"	"26"	"9.9E-05"	"0.0008865"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"810.90118"	"1620.79509"	"1620.79679"	"-1.04"	"-0.00085"	"6/120"	"6"	"120"	"177383.553649902"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"48.6585"	"14810"	"14810"	"14785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"13.2"	""	"11.5"	""	"15.2"	""	"19.9"	"13.1"	""	"685"	"28"	"35.000"	"28.000"	"0.0489396180790052"	"17"	"9.9E-05"	"0.0004896"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.93665"	"1620.79538"	"1620.79679"	"-0.86"	"-0.00047"	"9/120"	"9"	"120"	"5383108.79632568"	"HCD"	"MS2"	"25.61463"	"84.6"	"100.000"	"48.4841"	"14739"	"14739"	"14718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.2"	""	"117.6"	""	"130.6"	""	"133.1"	""	"150.4"	"139.9"	""	"698"	"51"	"35.000"	"28.000"	"0.000249359217800354"	"16"	"0"	"1.622E-06"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"540.93683"	"1620.79593"	"1620.79679"	"-0.53"	"-0.00028"	"10/120"	"10"	"120"	"12725558.3565674"	"HCD"	"MS2"	"2.967625"	"173.0"	"100.000"	"49.1423"	"14970"	"14970"	"14952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.9"	""	"242.1"	""	"248.4"	""	"267.9"	"0.6"	"289.6"	"298.4"	""	"705"	"51"	"35.000"	"28.000"	"0.000286522756947845"	"17"	"0"	"4.638E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"540.93695"	"1620.79630"	"1620.79679"	"-0.30"	"-0.00016"	"9/120"	"9"	"120"	"6738321.34173584"	"HCD"	"MS2"	"13.43902"	"101.5"	"100.000"	"48.8555"	"14854"	"14854"	"14835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.9"	""	"148.9"	""	"145.9"	""	"152.0"	"0.5"	"166.4"	"173.0"	""	"714"	"52"	"35.000"	"28.000"	"0.000249843592572812"	"19"	"0"	"4.803E-06"	"0.925"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"810.90186"	"1620.79643"	"1620.79679"	"-0.22"	"-0.00018"	"7/120"	"7"	"120"	"143812.507873535"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"49.0505"	"14933"	"14933"	"14910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"10.6"	""	"15.1"	""	"15.0"	""	"12.1"	"17.4"	""	"713"	"23"	"35.000"	"28.000"	"0.175816461109935"	"16"	"0.0007633"	"0.007484"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.93701"	"1620.79648"	"1620.79679"	"-0.19"	"-0.00010"	"8/120"	"8"	"120"	"15724642.319519"	"HCD"	"MS2"	"4.039678"	"148.5"	"76.522"	"48.7618"	"14851"	"14851"	"14840"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"272.4"	""	"194.5"	""	"205.0"	""	"221.9"	"0.2"	"247.8"	"262.7"	""	"713"	"49"	"35.000"	"28.000"	"0.000421754314616021"	"16"	"0"	"2.33E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFTDVHPDYGAR"	"[K].nFTDVHPDYGAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"540.93707"	"1620.79667"	"1620.79679"	"-0.07"	"-0.00004"	"9/120"	"9"	"120"	"2798409.78967285"	"HCD"	"MS2"	"47.12521"	"110.4"	"100.000"	"49.4892"	"15111"	"15111"	"15090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.2"	""	"134.5"	""	"136.1"	""	"173.7"	"3.0"	"220.0"	"247.5"	""	"713"	"9"	"35.000"	"28.000"	"4.47774682057223"	"13"	"9.9E-05"	"0.0008995"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENqAMDTR.[L]"	"N-Term(TMT6plex); Q7(Deamidated)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"810.91870"	"1620.83013"	"1620.81005"	"12.38"	"0.01004"	"6/118"	"6"	"118"	"176029.065490723"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"84.8839"	"29467"	"29467"	"29447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.6"	""	"16.4"	""	"20.0"	""	"15.1"	""	"26.8"	"25.0"	""	"1024"	"41"	"37.000"	"30.000"	"0.0039743852371389"	"22"	"0.001049"	"0.008883"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLEnQAMDTR.[L]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"2"	"2"	"810.91870"	"1620.83013"	"1620.81005"	"12.38"	"0.01004"	"6/118"	"6"	"118"	"176029.065490723"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"84.8839"	"29467"	"29467"	"29447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.6"	""	"16.4"	""	"20.0"	""	"15.1"	""	"26.8"	"25.0"	""	"1024"	"41"	"37.000"	"30.000"	"0.0039743852371389"	"22"	"0.001049"	"0.008883"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHSQVVAGMNYK"	"[K].SAHSQVVAGMNYk.[I]"	"K13(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"540.95020"	"1620.83603"	"1620.83654"	"-0.31"	"-0.00017"	"9/118"	"9"	"118"	"4846133.97137451"	"HCD"	"MS2"	"8.944523"	"161.0"	"100.000"	"35.9589"	"9624"	"9624"	"9605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"349.1"	""	"337.1"	""	"123.2"	""	"157.5"	"1.8"	"210.9"	"341.2"	""	"1064"	"52"	"37.000"	"30.000"	"0.000360505282048879"	"18"	"0"	"2.35E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAHSQVVAGMNYK"	"[K].SAHSQVVAGMNYk.[I]"	"K13(TMT6plex)"	"2"	"2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2;T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P08932; P01048"	"T-kininogen 2 OS=Rattus norvegicus OX=10116 PE=1 SV=2; T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"540.95038"	"1620.83658"	"1620.83654"	"0.02"	"0.00001"	"9/118"	"9"	"118"	"4638295.77728271"	"HCD"	"MS2"	"14.97099"	"167.8"	"100.000"	"35.8743"	"9627"	"9627"	"9601"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"364.9"	""	"328.7"	""	"139.4"	""	"152.0"	"5.1"	"250.7"	"345.5"	""	"1064"	"48"	"37.000"	"30.000"	"0.000935215362626025"	"17"	"0"	"3.117E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDPVPEVK"	"[K].eSYDPVPEVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.94836"	"1620.88945"	"1620.88851"	"0.58"	"0.00047"	"9/86"	"9"	"86"	"212438.374267578"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"76.6268"	"26128"	"26128"	"26104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.4"	""	"20.7"	""	"26.0"	""	"30.7"	""	"39.1"	"38.0"	""	"1095"	"23"	"37.000"	"30.000"	"0.307173766877777"	"14"	"0.003208"	"0.0348"	"0.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESYDPVPEVK"	"[K].eSYDPVPEVk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"Q4V8F9"	"Hydroxysteroid dehydrogenase-like protein 2 OS=Rattus norvegicus OX=10116 GN=Hsdl2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"810.94861"	"1620.88994"	"1620.88851"	"0.88"	"0.00072"	"9/86"	"9"	"86"	"213852.408325195"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"76.6991"	"26189"	"26189"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"29.9"	""	"27.1"	""	"25.8"	""	"31.1"	"42.7"	""	"1104"	"20"	"37.000"	"30.000"	"0.612264498024845"	"14"	"0.0001991"	"0.003681"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.3500"	"0.0000"	"1"	"1"	"1"	"540.97186"	"1620.90104"	"1620.90311"	"-1.28"	"-0.00069"	"6/82"	"6"	"82"	"2255596.36395264"	"HCD"	"MS2"	"30.14597"	"89.4"	"100.000"	"53.9921"	"16976"	"16976"	"16958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"115.9"	""	"106.6"	""	"118.6"	""	"183.7"	""	"171.4"	"151.6"	""	"1040"	"20"	"37.000"	"30.000"	"0.582107699402918"	"27"	"0.000264"	"0.00602"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDKNELVQK"	"[-].mDkNELVQk.[A]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K3(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P63102"	"14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"0.3571"	"0.0000"	"1"	"1"	"1"	"540.97198"	"1620.90140"	"1620.90311"	"-1.06"	"-0.00057"	"6/82"	"6"	"82"	"2124651.25439453"	"HCD"	"MS2"	"33.01626"	"78.5"	"100.000"	"54.3509"	"17089"	"17089"	"17069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.5"	""	"90.4"	""	"83.5"	""	"168.8"	"0.4"	"161.3"	"141.7"	""	"1034"	"14"	"37.000"	"30.000"	"2.01136339962043"	"23"	"0.001348"	"0.0112"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPYTDVNIVTIR"	"[K].tPYTDVNIVTIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"540.97711"	"1620.91678"	"1620.91584"	"0.58"	"0.00031"	"13/116"	"13"	"116"	"566370.403930664"	"HCD"	"MS2"	"11.9294"	"10.1"	"100.000"	"99.1579"	"35252"	"35252"	"35228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"9.8"	""	"13.5"	""	"16.8"	"1.5"	"18.8"	"19.4"	""	"973"	"41"	"36.000"	"29.000"	"0.00365664537939856"	"20"	"0"	"2.86E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPYTDVNIVTIR"	"[K].tPYTDVNIVTIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"Q99NA5"	"Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh3a PE=1 SV=1"	"0"	"3"	"3"	"0.8298"	"0.0000"	"1"	"1"	"1"	"540.97723"	"1620.91715"	"1620.91584"	"0.81"	"0.00044"	"11/116"	"11"	"116"	"632522.718444824"	"HCD"	"MS2"	"18.04117"	"10.1"	"100.000"	"99.1132"	"35204"	"35204"	"35183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"14.8"	""	"16.3"	""	"12.4"	""	"16.8"	"20.8"	""	"949"	"47"	"36.000"	"29.000"	"0.000857504122792185"	"24"	"0"	"5.511E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"810.96295"	"1620.91863"	"1620.92087"	"-1.39"	"-0.00112"	"17/112"	"17"	"112"	"389461.464111328"	"HCD"	"MS2"	"0"	"37.3"	"100.000"	"55.0749"	"17384"	"17384"	"17358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.2"	""	"52.6"	""	"44.3"	""	"52.4"	"0.7"	"72.1"	"85.0"	""	"965"	"64"	"36.000"	"29.000"	"2.13548889664967E-05"	"28"	"0"	"6.249E-07"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8281"	"0.0000"	"1"	"1"	"1"	"810.96332"	"1620.91936"	"1620.92087"	"-0.93"	"-0.00076"	"17/112"	"17"	"112"	"1391074.9185791"	"HCD"	"MS2"	"0"	"112.4"	"100.000"	"55.0658"	"17414"	"17414"	"17394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.9"	""	"137.4"	""	"133.7"	""	"151.5"	"2.3"	"231.8"	"293.4"	""	"960"	"64"	"36.000"	"29.000"	"2.00558575990378E-05"	"28"	"0"	"5.848E-07"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"540.97803"	"1620.91953"	"1620.92087"	"-0.83"	"-0.00045"	"9/112"	"9"	"112"	"2701105.67987061"	"HCD"	"MS2"	"36.02689"	"102.9"	"100.000"	"55.1507"	"17449"	"17449"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.8"	""	"122.9"	""	"128.5"	""	"140.6"	""	"213.3"	"228.0"	""	"959"	"24"	"36.000"	"29.000"	"0.203136802220755"	"26"	"0"	"0.0001421"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"540.97809"	"1620.91971"	"1620.92087"	"-0.72"	"-0.00039"	"9/112"	"9"	"112"	"2928320.86810303"	"HCD"	"MS2"	"9.993703"	"83.6"	"100.000"	"54.8494"	"17326"	"17326"	"17306"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.0"	""	"103.6"	""	"104.3"	""	"125.1"	""	"163.8"	"201.7"	""	"959"	"40"	"36.000"	"29.000"	"0.00526973300007893"	"27"	"0"	"1.152E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"810.96350"	"1620.91973"	"1620.92087"	"-0.71"	"-0.00057"	"17/112"	"17"	"112"	"1520671.32348633"	"HCD"	"MS2"	"0"	"122.4"	"100.000"	"55.4384"	"17532"	"17532"	"17512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.5"	""	"165.9"	""	"134.4"	""	"162.5"	""	"238.3"	"329.3"	""	"959"	"64"	"36.000"	"29.000"	"1.98512844076061E-05"	"26"	"0"	"6.396E-07"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"810.96356"	"1620.91985"	"1620.92087"	"-0.63"	"-0.00051"	"10/112"	"10"	"112"	"575168.218811035"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"54.7392"	"17281"	"17281"	"17260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.5"	""	"69.0"	""	"63.4"	""	"75.0"	""	"106.5"	"136.9"	""	"1003"	"47"	"37.000"	"30.000"	"0.000959999346398075"	"22"	"0"	"1.197E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTTGVTEEALK"	"[R].nTTGVTEEALk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"540.97821"	"1620.92008"	"1620.92087"	"-0.49"	"-0.00026"	"8/112"	"8"	"112"	"3550637.47375488"	"HCD"	"MS2"	"16.85223"	"95.2"	"100.000"	"55.3299"	"17488"	"17488"	"17464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.1"	""	"117.5"	""	"117.2"	""	"139.3"	""	"189.5"	"227.0"	""	"1010"	"43"	"37.000"	"30.000"	"0.00274973839685423"	"25"	"0"	"3.24E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKPEDYQGGR"	"[K].nkPEDYQGGR.[T]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.29449"	"1621.86893"	"1621.86984"	"-0.56"	"-0.00030"	"6/92"	"6"	"92"	"2862850.71466064"	"HCD"	"MS2"	"7.536909"	"153.6"	"100.000"	"25.7521"	"5572"	"5572"	"5550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"253.5"	"3.0"	"172.3"	""	"179.7"	""	"243.8"	""	"301.2"	"302.9"	""	"1025"	"2"	"37.000"	"30.000"	"31.8195380042908"	"13"	"0.001615"	"0.01317"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"811.44360"	"1621.87993"	"1621.88376"	"-2.36"	"-0.00191"	"12/92"	"12"	"92"	"879938.059326172"	"HCD"	"MS2"	"0"	"72.3"	"100.000"	"70.5198"	"23683"	"23683"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.9"	""	"137.3"	""	"124.2"	""	"108.3"	""	"100.4"	"83.3"	""	"996"	"37"	"36.000"	"29.000"	"0.00908300059755181"	"17"	"0.0001991"	"0.002956"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"811.44458"	"1621.88188"	"1621.88376"	"-1.16"	"-0.00094"	"7/92"	"7"	"92"	"720756.938781738"	"HCD"	"MS2"	"0"	"59.6"	"100.000"	"70.3937"	"23598"	"23598"	"23582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.4"	""	"103.3"	""	"111.5"	""	"95.1"	"0.4"	"86.7"	"70.8"	""	"971"	"38"	"36.000"	"29.000"	"0.00794674421153201"	"21"	"0.0001686"	"0.001541"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"811.44501"	"1621.88274"	"1621.88376"	"-0.63"	"-0.00051"	"8/92"	"8"	"92"	"1586938.73919678"	"HCD"	"MS2"	"0"	"118.9"	"100.000"	"70.7918"	"23793"	"23793"	"23782"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"205.5"	""	"221.5"	""	"204.5"	""	"199.8"	""	"176.7"	"116.6"	""	"972"	"53"	"36.000"	"29.000"	"0.000252718054315289"	"18"	"0"	"6.613E-05"	"0.691"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLDPENPTK"	"[R].ySLDPENPTk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"P24049"	"60S ribosomal protein L17 OS=Rattus norvegicus OX=10116 GN=Rpl17 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"811.44568"	"1621.88408"	"1621.88376"	"0.20"	"0.00016"	"8/92"	"8"	"92"	"1519710.41320801"	"HCD"	"MS2"	"0"	"111.5"	"100.000"	"70.7118"	"23728"	"23728"	"23712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.0"	""	"203.6"	""	"200.6"	""	"174.6"	""	"177.5"	"108.5"	""	"976"	"55"	"36.000"	"29.000"	"0.000156826634285647"	"16"	"0"	"3.113E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.1290"	"0.0000"	"1"	"1"	"1"	"811.91791"	"1622.82854"	"1622.85872"	"-18.60"	"-0.01509"	"8/118"	"8"	"118"	"382439.816223145"	"HCD"	"MS2"	"48.26182"	"20.5"	"100.000"	"97.8255"	"34715"	"34715"	"34694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.3"	""	"22.8"	""	"25.9"	""	"43.2"	"1.3"	"41.3"	"33.4"	""	"871"	"31"	"36.000"	"29.000"	"0.0357263097555636"	""	"0"	"0.000218"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.3714"	"0.0000"	"1"	"1"	"1"	"811.91821"	"1622.82915"	"1622.85872"	"-18.22"	"-0.01478"	"13/118"	"13"	"118"	"330382.466003418"	"HCD"	"MS2"	"44.86394"	"17.2"	"100.000"	"97.7837"	"34667"	"34667"	"34647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"22.3"	""	"23.5"	""	"30.3"	""	"33.1"	"32.8"	""	"874"	"35"	"36.000"	"29.000"	"0.0128967843205321"	""	"0.0001991"	"0.002537"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"811.91840"	"1622.82952"	"1622.82973"	"-0.13"	"-0.00011"	"5/102"	"5"	"102"	"64816.7940673828"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"102.5181"	"36609"	"36609"	"36582"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.0"	""	"2.6"	""	"2.5"	""	"7.4"	""	"6.7"	"7.9"	""	"876"	"15"	"36.000"	"29.000"	"1.4238823625482"	"14"	"0.001488"	"0.01235"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"811.91913"	"1622.83098"	"1622.82973"	"0.77"	"0.00063"	"3/102"	"3"	"102"	"67195.8220825195"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"102.6473"	"36637"	"36637"	"36609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.5"	""	"4.1"	""	"2.4"	""	"3.6"	""	"7.8"	"7.6"	""	"893"	"8"	"36.000"	"29.000"	"7.25807519442591"	"13"	"0.003529"	"0.03876"	"0.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"811.91937"	"1622.83147"	"1622.82973"	"1.07"	"0.00087"	"4/102"	"4"	"102"	"66197.3970336914"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"102.8510"	"36741"	"36741"	"36718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.9"	""	"4.7"	""	"3.1"	""	"5.5"	""	"5.9"	"6.8"	""	"904"	"18"	"36.000"	"29.000"	"0.760568675603851"	"15"	"0.002588"	"0.02642"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"541.62366"	"1622.85642"	"1622.85872"	"-1.42"	"-0.00077"	"16/118"	"16"	"118"	"606167.455078125"	"HCD"	"MS2"	"65.29366"	"9.9"	"100.000"	"97.6130"	"34629"	"34629"	"34599"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"14.7"	""	"15.3"	""	"17.2"	""	"17.3"	"17.0"	""	"979"	"64"	"36.000"	"29.000"	"2.06896286683012E-05"	""	"0"	"8.047E-07"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"3"	"3"	"0.7937"	"0.0000"	"1"	"1"	"1"	"541.62421"	"1622.85807"	"1622.85872"	"-0.40"	"-0.00022"	"17/118"	"17"	"118"	"581560.040649414"	"HCD"	"MS2"	"36.60034"	"10.1"	"100.000"	"97.5528"	"34573"	"34573"	"34551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"12.2"	""	"14.1"	""	"19.5"	"1.6"	"16.0"	"16.9"	""	"976"	"63"	"36.000"	"29.000"	"2.21014018992967E-05"	"29"	"0"	"8.746E-08"	"1.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGPEGGEGYVVK"	"[M].mLGPEGGEGYVVk.[L]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"Q794E4"	"Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3"	"0"	"2"	"2"	"0.3448"	"0.0000"	"1"	"1"	"1"	"811.93292"	"1622.85857"	"1622.82973"	"17.77"	"0.01442"	"7/102"	"7"	"102"	"226530.914428711"	"HCD"	"MS2"	"38.89399"	"11.8"	"100.000"	"97.8647"	"34731"	"34731"	"34710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"16.2"	""	"15.2"	""	"20.5"	""	"18.6"	"24.5"	""	"955"	"29"	"36.000"	"29.000"	"0.0539477549256261"	""	"0.002328"	"0.02228"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"811.93390"	"1622.86052"	"1622.85872"	"1.11"	"0.00090"	"11/118"	"11"	"118"	"270232.871154785"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"97.4926"	"34549"	"34549"	"34522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"18.8"	""	"20.7"	""	"35.0"	""	"30.0"	"31.0"	""	"938"	"12"	"36.000"	"29.000"	"2.76167674361771"	"23"	"0.001348"	"0.01062"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALTYDGALLGDR"	"[K].eALTYDGALLGDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"Q5XI72"	"Eukaryotic translation initiation factor 4H OS=Rattus norvegicus OX=10116 GN=Eif4h PE=1 SV=1"	"0"	"2"	"2"	"0.7179"	"0.0000"	"1"	"1"	"1"	"811.93542"	"1622.86357"	"1622.85872"	"2.99"	"0.00243"	"8/118"	"8"	"118"	"266475.62902832"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"97.5253"	"34593"	"34593"	"34573"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	""	"20.3"	""	"19.1"	""	"32.6"	""	"28.9"	"32.1"	""	"1014"	"39"	"37.000"	"30.000"	"0.00599802068752658"	"25"	"0.0001686"	"0.001962"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGESQTLQQFSR"	"[K].lGESQTLQQFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"811.93707"	"1622.86687"	"1622.86995"	"-1.90"	"-0.00154"	"18/118"	"18"	"118"	"489170.635498047"	"HCD"	"MS2"	"0"	"34.1"	"100.000"	"76.8151"	"26205"	"26205"	"26184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.7"	""	"47.5"	""	"37.5"	""	"45.6"	""	"61.8"	"76.0"	""	"1000"	"48"	"36.000"	"30.000"	"0.000835545307155353"	"25"	"0"	"5.533E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGESQTLQQFSR"	"[K].lGESQTLQQFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"541.62787"	"1622.86905"	"1622.86995"	"-0.55"	"-0.00030"	"12/118"	"12"	"118"	"429234.628662109"	"HCD"	"MS2"	"100"	"14.9"	"100.000"	"76.9663"	"26265"	"26265"	"26251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"16.5"	""	"23.6"	""	"23.9"	""	"25.4"	"28.4"	""	"1018"	"37"	"37.000"	"30.000"	"0.00934798016764308"	"20"	"0"	"0.0001087"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"811.93823"	"1622.86919"	"1622.87114"	"-1.21"	"-0.00098"	"7/84"	"7"	"84"	"215618.097473145"	"HCD"	"MS2"	"20.16304"	"20.3"	"100.000"	"105.4185"	"37745"	"37745"	"37718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"18.6"	""	"25.2"	""	"29.3"	""	"41.0"	"54.0"	""	"1018"	"27"	"37.000"	"30.000"	"0.0949987262634847"	"17"	"9.9E-05"	"0.0004711"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGESQTLQQFSR"	"[K].lGESQTLQQFSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"811.93835"	"1622.86943"	"1622.86995"	"-0.32"	"-0.00026"	"8/118"	"8"	"118"	"546261.030944824"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"76.9219"	"26279"	"26279"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"47.4"	""	"45.0"	""	"52.5"	""	"51.1"	"87.3"	""	"1004"	"49"	"37.000"	"30.000"	"0.000600763746716237"	"22"	"0"	"2.865E-07"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"811.93890"	"1622.87053"	"1622.87114"	"-0.38"	"-0.00031"	"9/84"	"9"	"84"	"147575.788330078"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"105.6525"	"37856"	"37856"	"37838"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"18.6"	""	"13.8"	""	"20.2"	""	"25.8"	"28.9"	""	"1003"	"38"	"37.000"	"30.000"	"0.00713297886742095"	"19"	"0.0001686"	"0.001044"	"0.444"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"811.93933"	"1622.87139"	"1622.87114"	"0.15"	"0.00012"	"9/84"	"9"	"84"	"235080.897949219"	"HCD"	"MS2"	"5.384061"	"20.8"	"100.000"	"105.9344"	"37969"	"37969"	"37954"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.6"	""	"24.4"	""	"21.3"	"1.8"	"30.7"	""	"42.9"	"44.5"	""	"991"	"51"	"36.000"	"29.000"	"0.000351595784025859"	"21"	"0"	"2.071E-06"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGETLEELMK"	"[R].dGETLEELMk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7959"	"0.0000"	"1"	"1"	"1"	"811.93945"	"1622.87163"	"1622.87114"	"0.30"	"0.00024"	"7/84"	"7"	"84"	"181359.41986084"	"HCD"	"MS2"	"4.086315"	"17.8"	"100.000"	"105.6982"	"37857"	"37857"	"37843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"20.4"	""	"22.0"	""	"23.7"	""	"34.7"	"41.3"	""	"991"	"49"	"36.000"	"29.000"	"0.000611003444864923"	"26"	"0"	"6.68E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSDWILNGSK"	"[R].sGSDWILnGSk.[V]"	"N-Term(TMT6plex); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"3"	"541.63080"	"1622.87784"	"1622.87901"	"-0.72"	"-0.00039"	"8/104"	"8"	"104"	"497266.720581055"	"HCD"	"MS2"	"33.08614"	"18.1"	"100.000"	"97.1395"	"34407"	"34407"	"34377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"30.7"	""	"26.7"	""	"25.5"	""	"29.7"	"30.1"	""	"974"	"8"	"36.000"	"29.000"	"7.70067795124677"	"19"	"0.009846"	"0.1331"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSDWILNGSK"	"[R].sGSDWILnGSk.[V]"	"N-Term(TMT6plex); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.5385"	"0.0000"	"1"	"1"	"1"	"811.94263"	"1622.87798"	"1622.87901"	"-0.63"	"-0.00052"	"5/104"	"5"	"104"	"295323.702392578"	"HCD"	"MS2"	"44.79811"	"22.3"	"100.000"	"96.1471"	"34005"	"34005"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"27.3"	""	"30.8"	""	"30.8"	""	"40.2"	"39.4"	""	"986"	"13"	"36.000"	"29.000"	"2.54007721778806"	"19"	"0.001951"	"0.01722"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSDWILNGSK"	"[R].sGSDWILnGSk.[V]"	"N-Term(TMT6plex); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"811.94275"	"1622.87822"	"1622.87901"	"-0.48"	"-0.00039"	"5/104"	"5"	"104"	"141927.307983398"	"HCD"	"MS2"	"15.68909"	"13.5"	"100.000"	"97.1168"	"34428"	"34428"	"34404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"15.9"	""	"20.0"	""	"19.0"	""	"23.7"	"23.7"	""	"985"	"25"	"36.000"	"29.000"	"0.143023115732374"	"24"	"0.0001991"	"0.005568"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSDWILNGSK"	"[R].sGSDWILnGSk.[V]"	"N-Term(TMT6plex); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"811.94299"	"1622.87871"	"1622.87901"	"-0.18"	"-0.00015"	"8/104"	"8"	"104"	"215674.392272949"	"HCD"	"MS2"	"0"	"18.6"	"100.000"	"96.1492"	"34039"	"34039"	"34022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.9"	""	"22.5"	""	"27.0"	""	"21.8"	"1.5"	"32.9"	"31.1"	""	"972"	"39"	"36.000"	"29.000"	"0.00684914356033032"	"28"	"0"	"5.423E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGSDWILNGSK"	"[R].sGSDWILnGSk.[V]"	"N-Term(TMT6plex); N8(Deamidated); K11(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"811.94403"	"1622.88078"	"1622.87901"	"1.10"	"0.00089"	"5/104"	"5"	"104"	"125904.204223633"	"HCD"	"MS2"	"17.75383"	"10.9"	"100.000"	"97.0219"	"34359"	"34359"	"34333"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"16.4"	""	"21.3"	""	"12.5"	""	"20.3"	"18.6"	""	"992"	"22"	"36.000"	"29.000"	"0.348723870662382"	"20"	"0.0003294"	"0.006166"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVEGLPINDFSR"	"[K].fVEGLPInDFSR.[E]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"O88989"	"Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mdh1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.43176"	"1623.85625"	"1623.85799"	"-1.07"	"-0.00087"	"8/112"	"8"	"112"	"107871.128540039"	"HCD"	"MS2"	"7.991177"	"7.4"	"100.000"	"112.0419"	"40337"	"40337"	"40313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"9.0"	""	"12.0"	""	"9.9"	""	"10.6"	"14.5"	""	"1004"	"16"	"37.000"	"30.000"	"1.22096641255506"	"14"	"0.0001991"	"0.004991"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSQLALFSVSDK"	"[M].aSSQLALFSVSDk.[T]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.9206"	"0.0000"	"1"	"1"	"1"	"812.44281"	"1623.87834"	"1623.87912"	"-0.48"	"-0.00039"	"9/134"	"9"	"134"	"888293.470947266"	"HCD"	"MS2"	"0"	"32.7"	"100.000"	"113.2688"	"40828"	"40828"	"40809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.3"	""	"51.2"	""	"49.7"	""	"52.3"	"0.9"	"58.0"	"51.3"	""	"988"	"63"	"36.000"	"29.000"	"2.43067530626637E-05"	"22"	"0"	"7.245E-07"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSQLALFSVSDK"	"[M].aSSQLALFSVSDk.[T]"	"N-Term(Prot)(Acetyl); K13(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"812.44318"	"1623.87908"	"1623.87912"	"-0.03"	"-0.00002"	"9/134"	"9"	"134"	"824774.993041992"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"113.3316"	"40867"	"40867"	"40847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"41.6"	""	"48.2"	""	"50.1"	"1.6"	"55.9"	"49.0"	""	"978"	"61"	"36.000"	"29.000"	"4.30832898900919E-05"	"22"	"0"	"9.925E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYDQALADLK"	"[K].eYDQALADLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"541.97064"	"1623.89737"	"1623.89941"	"-1.25"	"-0.00068"	"7/98"	"7"	"98"	"573230.668823242"	"HCD"	"MS2"	"45.73678"	"24.1"	"100.000"	"99.3576"	"35303"	"35303"	"35281"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"28.4"	""	"26.6"	""	"30.9"	""	"36.5"	"76.3"	""	"963"	"29"	"36.000"	"29.000"	"0.0661601210968526"	"18"	"9.9E-05"	"0.0004269"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"541.97107"	"1623.89865"	"1623.89941"	"-0.46"	"-0.00025"	"11/90"	"11"	"90"	"891790.567565918"	"HCD"	"MS2"	"11.75621"	"28.6"	"100.000"	"73.8428"	"24998"	"24998"	"24977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"38.9"	""	"41.7"	""	"41.8"	""	"56.2"	"54.6"	""	"952"	"41"	"36.000"	"29.000"	"0.0040983302603987"	"22"	"0.0001686"	"0.001319"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYDQALADLK"	"[K].eYDQALADLk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"3"	"3"	"0.5357"	"0.0000"	"1"	"1"	"1"	"541.97119"	"1623.89902"	"1623.89941"	"-0.24"	"-0.00013"	"8/98"	"8"	"98"	"534226.049926758"	"HCD"	"MS2"	"23.4004"	"29.3"	"100.000"	"99.4741"	"35379"	"35379"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"23.2"	""	"21.7"	""	"36.9"	""	"32.7"	"143.3"	""	"930"	"28"	"36.000"	"29.000"	"0.0821207586619067"	"27"	"0.0001991"	"0.003184"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVGDVAYDEAK"	"[K].vVGDVAYDEAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"541.97125"	"1623.89920"	"1623.89941"	"-0.13"	"-0.00007"	"11/90"	"11"	"90"	"865809.216125488"	"HCD"	"MS2"	"11.74096"	"29.3"	"100.000"	"73.9936"	"25089"	"25089"	"25065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.0"	""	"30.0"	""	"45.4"	""	"43.6"	"0.4"	"52.6"	"56.4"	""	"932"	"42"	"36.000"	"29.000"	"0.00263260630262533"	"25"	"0"	"0.0001425"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTLDPALLRPGR"	"[R].aDTLDPALLRPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"541.98297"	"1623.93436"	"1623.93797"	"-2.22"	"-0.00120"	"6/108"	"6"	"108"	"991598.125"	"HCD"	"MS2"	"6.336237"	"30.1"	"100.000"	"77.7758"	"26589"	"26589"	"26565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.7"	""	"44.2"	""	"35.6"	""	"47.0"	"0.2"	"50.3"	"58.3"	""	"791"	"27"	"35.000"	"28.000"	"0.078550053981484"	"20"	"9.9E-05"	"0.0006173"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTLDPALLRPGR"	"[R].aDTLDPALLRPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"541.98303"	"1623.93454"	"1623.93797"	"-2.11"	"-0.00114"	"12/108"	"12"	"108"	"1378582.6651001"	"HCD"	"MS2"	"8.911178"	"38.7"	"100.000"	"77.3586"	"26450"	"26450"	"26437"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"47.6"	""	"48.3"	""	"66.4"	"0.2"	"73.8"	"75.1"	""	"791"	"24"	"35.000"	"28.000"	"0.1419536251521"	"19"	"0"	"4.692E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTLDPALLRPGR"	"[R].aDTLDPALLRPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"541.98383"	"1623.93692"	"1623.93797"	"-0.64"	"-0.00035"	"7/108"	"7"	"108"	"2064539.19854736"	"HCD"	"MS2"	"8.092092"	"50.4"	"100.000"	"77.6269"	"26556"	"26556"	"26545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.1"	""	"70.8"	""	"73.7"	""	"78.6"	""	"91.6"	"88.1"	""	"775"	"35"	"35.000"	"28.000"	"0.0134670262559242"	"21"	"0"	"2.697E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTLDPALLRPGR"	"[R].aDTLDPALLRPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"541.98407"	"1623.93766"	"1623.93797"	"-0.19"	"-0.00010"	"9/108"	"9"	"108"	"689744.751220703"	"HCD"	"MS2"	"12.05982"	"27.1"	"100.000"	"77.9208"	"26675"	"26675"	"26654"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"29.3"	""	"43.3"	""	"40.0"	""	"50.6"	"50.6"	""	"782"	"18"	"35.000"	"28.000"	"0.656412371085921"	"16"	"0.0001991"	"0.002195"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTLDPALLRPGR"	"[R].aDTLDPALLRPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"541.98486"	"1623.94004"	"1623.93797"	"1.27"	"0.00069"	"7/108"	"7"	"108"	"2259118.83795166"	"HCD"	"MS2"	"13.56402"	"56.4"	"100.000"	"77.4408"	"26453"	"26453"	"26439"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.7"	""	"75.7"	""	"85.3"	""	"90.0"	"0.3"	"96.0"	"107.5"	""	"784"	"36"	"35.000"	"28.000"	"0.00964464100825868"	"22"	"0"	"3.312E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTLDPALLRPGR"	"[R].aDTLDPALLRPGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"Q63570"	"26S proteasome regulatory subunit 6B OS=Rattus norvegicus OX=10116 GN=Psmc4 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"541.98578"	"1623.94278"	"1623.93797"	"2.96"	"0.00160"	"6/108"	"6"	"108"	"779501.484313965"	"HCD"	"MS2"	"37.88728"	"26.1"	"100.000"	"77.1519"	"26338"	"26338"	"26326"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"37.1"	""	"36.6"	""	"43.4"	"0.8"	"44.3"	"51.0"	""	"770"	"21"	"35.000"	"28.000"	"0.280841141448009"	"20"	"9.9E-05"	"0.0007155"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDANEQYK"	"[K].lVSDANEQYk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"542.30170"	"1624.89054"	"1624.89466"	"-2.54"	"-0.00137"	"7/88"	"7"	"88"	"975510.512268066"	"HCD"	"MS2"	"40.14076"	"37.0"	"100.000"	"59.6333"	"19266"	"19266"	"19243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.9"	""	"39.1"	""	"40.7"	""	"66.0"	""	"88.5"	"74.0"	""	"939"	"22"	"36.000"	"29.000"	"0.276462096189449"	"27"	"0.001348"	"0.01106"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDANEQYK"	"[K].lVSDANEQYk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"812.95099"	"1624.89470"	"1624.89466"	"0.03"	"0.00002"	"10/88"	"10"	"88"	"228466.335388184"	"HCD"	"MS2"	"30.88213"	"20.7"	"100.000"	"59.4674"	"19199"	"19199"	"19183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.6"	""	"26.6"	""	"27.9"	""	"31.8"	""	"37.6"	"38.0"	""	"911"	"22"	"36.000"	"29.000"	"0.279568593352564"	"23"	"0.00329"	"0.03511"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSDANEQYK"	"[K].lVSDANEQYk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"812.95178"	"1624.89629"	"1624.89466"	"1.00"	"0.00082"	"8/88"	"8"	"88"	"257347.637817383"	"HCD"	"MS2"	"26.72699"	"24.1"	"100.000"	"59.6540"	"19241"	"19241"	"19221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"32.1"	""	"34.3"	""	"41.4"	""	"43.8"	"41.9"	""	"891"	"28"	"36.000"	"29.000"	"0.0781353763570505"	"16"	"0"	"0.0003442"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYHSHVDAPK"	"[R].iYHSHVDAPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"406.98541"	"1624.91982"	"1624.92115"	"-0.82"	"-0.00033"	"5/78"	"5"	"78"	"9256929.82849121"	"HCD"	"MS2"	"16.52836"	"274.6"	"100.000"	"32.2954"	"8140"	"8140"	"8119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"430.6"	"10.4"	"407.8"	""	"336.5"	""	"455.2"	"6.9"	"541.6"	"412.2"	""	"892"	"23"	"36.000"	"29.000"	"0.236229895975679"	"14"	"0.0001686"	"0.001689"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYHSHVDAPK"	"[R].iYHSHVDAPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"4"	"4"	"0.9615"	"0.0000"	"1"	"1"	"1"	"406.98553"	"1624.92031"	"1624.92115"	"-0.52"	"-0.00021"	"5/78"	"5"	"78"	"8987339.86871338"	"HCD"	"MS2"	"16.92324"	"263.8"	"100.000"	"32.1989"	"8138"	"8138"	"8121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"396.2"	"10.2"	"391.6"	""	"312.6"	""	"464.0"	"4.7"	"486.9"	"432.6"	""	"892"	"26"	"36.000"	"29.000"	"0.113588629265293"	"15"	"0.0001991"	"0.002684"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETHADLWPAK"	"[K].eTHADLWPAk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"O35142"	"Coatomer subunit beta' OS=Rattus norvegicus OX=10116 GN=Copb2 PE=1 SV=3"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"542.63965"	"1625.90439"	"1625.90516"	"-0.47"	"-0.00026"	"10/80"	"10"	"80"	"1199885.30938721"	"HCD"	"MS2"	"17.98366"	"37.7"	"100.000"	"61.2796"	"19903"	"19903"	"19880"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.6"	""	"39.0"	""	"52.2"	""	"61.4"	"1.5"	"78.7"	"65.6"	""	"927"	"21"	"36.000"	"29.000"	"0.403691623944643"	"25"	"0"	"0.00031"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLVGPEMHEK"	"[R].aGLVGPEMHEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"542.64087"	"1625.90805"	"1625.90853"	"-0.29"	"-0.00016"	"8/86"	"8"	"86"	"3412054.43511963"	"HCD"	"MS2"	"12.00411"	"92.4"	"100.000"	"50.3056"	"15444"	"15444"	"15414"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.6"	""	"148.4"	""	"131.4"	""	"109.8"	"0.3"	"164.0"	"173.4"	""	"907"	"36"	"36.000"	"29.000"	"0.0122061103358086"	"16"	"0"	"3.681E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGLVGPEMHEK"	"[R].aGLVGPEMHEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"542.64099"	"1625.90842"	"1625.90853"	"-0.07"	"-0.00004"	"9/86"	"9"	"86"	"3489356.30383301"	"HCD"	"MS2"	"11.62152"	"99.6"	"100.000"	"49.9409"	"15330"	"15330"	"15308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.8"	""	"155.5"	""	"142.5"	""	"106.8"	""	"163.8"	"200.3"	""	"899"	"35"	"36.000"	"29.000"	"0.0137952538378182"	"15"	"0"	"8.171E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYTDPVEAVK"	"[K].fYTDPVEAVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"813.96008"	"1626.91289"	"1626.91433"	"-0.89"	"-0.00072"	"11/80"	"11"	"80"	"204898.581420898"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"101.7311"	"36292"	"36292"	"36272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"15.7"	""	"24.8"	""	"22.6"	""	"27.8"	"33.7"	""	"849"	"23"	"36.000"	"29.000"	"0.218714559624956"	"14"	"0.0003294"	"0.00616"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYTDPVEAVK"	"[K].fYTDPVEAVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"813.96039"	"1626.91350"	"1626.91433"	"-0.51"	"-0.00042"	"12/80"	"12"	"80"	"320724.662902832"	"HCD"	"MS2"	"8.782956"	"27.4"	"100.000"	"101.2262"	"36062"	"36062"	"36040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"49.4"	""	"45.4"	""	"30.1"	""	"46.0"	"48.8"	""	"834"	"36"	"36.000"	"29.000"	"0.00959701237859347"	"18"	"0.0001991"	"0.002081"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYTDPVEAVK"	"[K].fYTDPVEAVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"813.96063"	"1626.91399"	"1626.91433"	"-0.21"	"-0.00017"	"11/80"	"11"	"80"	"224506.855651855"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"101.5286"	"36184"	"36184"	"36164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.7"	""	"23.3"	""	"28.1"	""	"21.0"	""	"40.5"	"41.7"	""	"833"	"37"	"36.000"	"29.000"	"0.008425874879195"	"22"	"0.0001991"	"0.002194"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYTDPVEAVK"	"[K].fYTDPVEAVk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"B2GV06"	"Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Oxct1 PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"813.96106"	"1626.91484"	"1626.91433"	"0.31"	"0.00026"	"15/80"	"15"	"80"	"302726.167175293"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"101.3852"	"36152"	"36152"	"36136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"38.5"	""	"37.0"	""	"34.5"	""	"46.4"	"37.6"	""	"840"	"49"	"36.000"	"29.000"	"0.000579761391133211"	"29"	"0"	"0.0002939"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHQEVLEAGK"	"[K].aSHQEVLEAGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.6176"	"0.0000"	"1"	"1"	"1"	"542.97681"	"1626.91587"	"1626.92154"	"-3.49"	"-0.00189"	"6/106"	"6"	"106"	"16325748.9158325"	"HCD"	"MS2"	"4.843823"	"341.7"	"100.000"	"34.3091"	"8994"	"8994"	"8978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"513.5"	""	"348.3"	""	"466.1"	""	"590.5"	""	"738.2"	"586.3"	""	"849"	"34"	"36.000"	"29.000"	"0.0169776546273586"	"28"	"0"	"3.974E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASHQEVLEAGK"	"[K].aSHQEVLEAGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.6061"	"0.0000"	"1"	"1"	"1"	"542.97687"	"1626.91605"	"1626.92154"	"-3.38"	"-0.00183"	"6/106"	"6"	"106"	"15305872.9767456"	"HCD"	"MS2"	"4.344391"	"325.7"	"100.000"	"34.4080"	"8998"	"8998"	"8989"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"496.7"	""	"332.9"	""	"438.1"	""	"567.1"	""	"696.0"	"564.3"	""	"838"	"33"	"36.000"	"29.000"	"0.0229199688452574"	"28"	"0"	"4.106E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVHPDTGISSK"	"[K].qVHPDTGISSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"542.97797"	"1626.91935"	"1626.92154"	"-1.35"	"-0.00073"	"7/110"	"7"	"110"	"5405552.04193115"	"HCD"	"MS2"	"5.240566"	"146.1"	"100.000"	"34.5963"	"9110"	"9110"	"9091"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"149.2"	""	"107.2"	""	"132.5"	""	"270.3"	""	"391.4"	"344.2"	""	"868"	"31"	"36.000"	"29.000"	"0.0336891248616852"	"23"	"0.0001686"	"0.001238"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVHPDTGISSK"	"[K].qVHPDTGISSk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"2"	"Q00729"	"Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"Q00715; Q00729"	"Histone H2B type 1 OS=Rattus norvegicus OX=10116 PE=1 SV=2; Histone H2B type 1-A OS=Rattus norvegicus OX=10116 GN=Hist1h2ba PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"542.97803"	"1626.91953"	"1626.92154"	"-1.24"	"-0.00067"	"7/110"	"7"	"110"	"4123072.96478271"	"HCD"	"MS2"	"4.30632"	"115.8"	"100.000"	"34.7297"	"9128"	"9128"	"9108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.4"	""	"101.6"	""	"110.7"	""	"201.0"	""	"299.4"	"281.8"	""	"868"	"33"	"36.000"	"29.000"	"0.0197464818105121"	"21"	"0.0001991"	"0.002795"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INQTYQQQYGR"	"[R].iNQTYQQQYGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"814.42279"	"1627.83830"	"1627.83898"	"-0.42"	"-0.00034"	"7/98"	"7"	"98"	"327902.144104004"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"43.3412"	"12617"	"12617"	"12594"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"28.9"	""	"25.9"	""	"25.7"	""	"33.6"	"33.2"	""	"813"	"38"	"36.000"	"29.000"	"0.00609621885631714"	"21"	"0"	"4.424E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INQTYQQQYGR"	"[R].iNQTYQQQYGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"814.42303"	"1627.83879"	"1627.83898"	"-0.12"	"-0.00010"	"6/98"	"6"	"98"	"189352.399902344"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"43.2171"	"12601"	"12601"	"12571"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"18.0"	""	"16.1"	""	"17.3"	"1.3"	"17.6"	"20.1"	""	"815"	"21"	"36.000"	"29.000"	"0.308409404721047"	"16"	"0.0001991"	"0.003101"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INQTYQQQYGR"	"[R].iNQTYQQQYGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"814.42303"	"1627.83879"	"1627.83898"	"-0.12"	"-0.00010"	"18/98"	"18"	"98"	"787619.096191406"	"HCD"	"MS2"	"0"	"45.2"	"100.000"	"43.0444"	"12496"	"12496"	"12473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.7"	""	"66.3"	""	"67.7"	""	"63.8"	""	"74.7"	"71.1"	""	"815"	"36"	"36.000"	"29.000"	"0.0109680043260022"	"19"	"0"	"1.414E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INQTYQQQYGR"	"[R].iNQTYQQQYGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"814.42352"	"1627.83977"	"1627.83898"	"0.48"	"0.00039"	"9/98"	"9"	"98"	"1312932.0647583"	"HCD"	"MS2"	"0"	"69.3"	"100.000"	"42.9041"	"12473"	"12473"	"12443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"131.8"	""	"103.4"	""	"104.4"	""	"97.6"	""	"121.7"	"98.9"	""	"819"	"44"	"36.000"	"29.000"	"0.00166822223760784"	"21"	"0"	"2.438E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"543.29077"	"1627.85776"	"1627.86196"	"-2.58"	"-0.00140"	"8/78"	"8"	"78"	"524902.671325684"	"HCD"	"MS2"	"28.26145"	"14.5"	"100.000"	"98.2382"	"34851"	"34851"	"34829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"17.4"	""	"18.9"	""	"26.9"	""	"25.4"	"30.5"	""	"960"	"9"	"36.000"	"29.000"	"6.01507763971879"	"15"	"0.002035"	"0.01822"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"543.29211"	"1627.86179"	"1627.86196"	"-0.10"	"-0.00006"	"7/78"	"7"	"78"	"1486348.71618652"	"HCD"	"MS2"	"15.30313"	"42.1"	"100.000"	"97.9338"	"34728"	"34728"	"34707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.5"	""	"45.6"	""	"46.1"	""	"78.3"	"0.4"	"88.6"	"81.2"	""	"967"	"23"	"36.000"	"29.000"	"0.228768633707876"	"23"	"0.0001991"	"0.003543"	"0.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"814.43463"	"1627.86199"	"1627.86196"	"0.02"	"0.00001"	"6/78"	"6"	"78"	"205246.432434082"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"97.7952"	"34672"	"34672"	"34647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"16.5"	""	"21.0"	""	"32.2"	""	"34.3"	"27.1"	""	"965"	"39"	"36.000"	"29.000"	"0.00585460120349352"	"22"	"9.9E-05"	"0.0008477"	"0.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"543.29218"	"1627.86197"	"1627.86196"	"0.01"	"0.00000"	"9/78"	"9"	"78"	"1520386.16320801"	"HCD"	"MS2"	"16.75059"	"43.0"	"100.000"	"97.9409"	"34762"	"34762"	"34742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.9"	""	"49.1"	""	"52.4"	""	"71.2"	""	"90.9"	"83.4"	""	"965"	"28"	"36.000"	"29.000"	"0.0684695254214987"	"25"	"0.0001991"	"0.003514"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"814.43469"	"1627.86211"	"1627.86196"	"0.09"	"0.00007"	"6/78"	"6"	"78"	"294465.274108887"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"98.1138"	"34832"	"34832"	"34819"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"27.8"	""	"26.1"	""	"39.7"	""	"45.7"	"43.2"	""	"964"	"40"	"36.000"	"29.000"	"0.00509386039440984"	"17"	"9.9E-05"	"0.0006092"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"543.29224"	"1627.86216"	"1627.86196"	"0.12"	"0.00007"	"8/78"	"8"	"78"	"540427.604248047"	"HCD"	"MS2"	"29.15002"	"14.8"	"100.000"	"98.2801"	"34898"	"34898"	"34875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"18.7"	""	"14.2"	""	"31.4"	""	"27.0"	"35.8"	""	"964"	"9"	"36.000"	"29.000"	"6.26681736612046"	"13"	"0.002834"	"0.03011"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"814.43488"	"1627.86247"	"1627.86196"	"0.32"	"0.00026"	"5/78"	"5"	"78"	"199853.155456543"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"97.8369"	"34720"	"34720"	"34694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"20.5"	""	"22.3"	""	"28.4"	""	"34.4"	"28.9"	""	"961"	"25"	"36.000"	"29.000"	"0.161693809084923"	"16"	"0.0001991"	"0.003153"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPEK"	"[K].dFYELEPEk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"P53534"	"Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus OX=10116 GN=Pygb PE=1 SV=3"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"814.43506"	"1627.86284"	"1627.86196"	"0.54"	"0.00044"	"12/78"	"12"	"78"	"244237.975097656"	"HCD"	"MS2"	"4.586191"	"19.9"	"100.000"	"98.0932"	"34792"	"34792"	"34778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"26.3"	""	"27.9"	""	"27.6"	""	"37.4"	"38.9"	""	"964"	"27"	"36.000"	"29.000"	"0.0972852587294513"	"15"	"0.0001686"	"0.001111"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQMDGLIPGVEPR"	"[R].sQMDGLIPGVEPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ86"	"Nucleolar protein 58 OS=Rattus norvegicus OX=10116 GN=Nop58 PE=1 SV=1"	"Q9QZ86"	"Nucleolar protein 58 OS=Rattus norvegicus OX=10116 GN=Nop58 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.43665"	"1627.86601"	"1627.86751"	"-0.92"	"-0.00075"	"5/138"	"5"	"138"	"110580.418151855"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"97.4234"	"34521"	"34521"	"34497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"11.8"	""	"10.1"	""	"10.2"	""	"12.5"	"16.7"	""	"950"	"20"	"36.000"	"29.000"	"0.508971669987863"	"14"	"0.0001991"	"0.005968"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQMDGLIPGVEPR"	"[R].sQMDGLIPGVEPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ86"	"Nucleolar protein 58 OS=Rattus norvegicus OX=10116 GN=Nop58 PE=1 SV=1"	"Q9QZ86"	"Nucleolar protein 58 OS=Rattus norvegicus OX=10116 GN=Nop58 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.43744"	"1627.86760"	"1627.86751"	"0.06"	"0.00005"	"5/138"	"5"	"138"	"118215.297668457"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"97.5207"	"34591"	"34591"	"34573"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"9.3"	""	"9.8"	""	"12.8"	""	"12.2"	"16.5"	""	"950"	"13"	"36.000"	"29.000"	"2.20644755730806"	"13"	"0.001596"	"0.01306"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"543.29651"	"1627.87497"	"1627.87656"	"-0.98"	"-0.00053"	"7/82"	"7"	"82"	"1569937.019104"	"HCD"	"MS2"	"7.951357"	"45.7"	"100.000"	"67.3425"	"22391"	"22391"	"22368"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.6"	""	"47.5"	""	"56.3"	""	"101.2"	"0.3"	"85.7"	"88.8"	""	"949"	"42"	"36.000"	"29.000"	"0.00313499041079604"	"17"	"0.0001991"	"0.003123"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"543.29681"	"1627.87589"	"1627.87656"	"-0.42"	"-0.00023"	"10/82"	"10"	"82"	"1203455.46508789"	"HCD"	"MS2"	"9.853425"	"33.6"	"100.000"	"67.6465"	"22514"	"22514"	"22495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"33.8"	""	"48.1"	""	"62.9"	""	"55.1"	"72.2"	""	"961"	"31"	"36.000"	"29.000"	"0.0414661192202029"	"15"	"0.0001991"	"0.004644"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"814.44177"	"1627.87627"	"1627.87656"	"-0.18"	"-0.00015"	"13/82"	"13"	"82"	"341078.935180664"	"HCD"	"MS2"	"0"	"27.0"	"100.000"	"67.6488"	"22515"	"22515"	"22495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.7"	""	"34.2"	""	"37.7"	""	"54.5"	"1.6"	"38.1"	"56.9"	""	"960"	"25"	"36.000"	"29.000"	"0.139393087414294"	"15"	"0.001872"	"0.01563"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"814.44177"	"1627.87627"	"1627.87656"	"-0.18"	"-0.00015"	"8/82"	"8"	"82"	"370989.522705078"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"67.3056"	"22376"	"22376"	"22352"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.0"	""	"27.5"	""	"27.6"	""	"60.6"	""	"47.1"	"51.2"	""	"960"	"31"	"36.000"	"29.000"	"0.0370033665150926"	"16"	"0.001951"	"0.01689"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"814.44226"	"1627.87724"	"1627.87656"	"0.42"	"0.00034"	"14/82"	"14"	"82"	"419706.930358887"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"67.5556"	"22446"	"22446"	"22427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"41.8"	""	"52.2"	""	"70.1"	""	"51.2"	"60.9"	""	"949"	"36"	"36.000"	"29.000"	"0.011123365728693"	"18"	"0.0001991"	"0.005771"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"814.44238"	"1627.87749"	"1627.87656"	"0.57"	"0.00046"	"11/82"	"11"	"82"	"375685.505493164"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"67.2493"	"22322"	"22322"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.5"	""	"28.1"	""	"24.1"	""	"71.6"	"0.1"	"49.5"	"53.6"	""	"947"	"28"	"36.000"	"29.000"	"0.0736749726565003"	"22"	"0.001615"	"0.01462"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQELMNVK"	"[R].eYQELmNVk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K9(TMT6plex)"	"1"	"2"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q6IG05; Q10758"	"Keratin, type II cytoskeletal 75 OS=Rattus norvegicus OX=10116 GN=Krt75 PE=3 SV=2; Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"543.29742"	"1627.87772"	"1627.87656"	"0.71"	"0.00038"	"10/82"	"10"	"82"	"1292111.26019287"	"HCD"	"MS2"	"13.04803"	"41.3"	"100.000"	"67.2470"	"22321"	"22321"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.9"	""	"42.0"	""	"54.4"	""	"103.0"	""	"66.7"	"74.1"	""	"942"	"30"	"36.000"	"29.000"	"0.0432534652943766"	"15"	"0.0005161"	"0.006787"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTESTSFLEK"	"[K].qTESTSFLEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.7121"	"0.0000"	"1"	"1"	"1"	"814.45087"	"1627.89446"	"1627.89432"	"0.08"	"0.00007"	"9/104"	"9"	"104"	"757333.954956055"	"HCD"	"MS2"	"13.34701"	"74.3"	"100.000"	"69.1566"	"23095"	"23095"	"23076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.0"	""	"74.6"	""	"73.0"	""	"169.2"	""	"152.6"	"141.7"	""	"913"	"66"	"36.000"	"29.000"	"1.03858197714745E-05"	""	"0"	"8.189E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTESTSFLEK"	"[K].qTESTSFLEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"P60901"	"Proteasome subunit alpha type-6 OS=Rattus norvegicus OX=10116 GN=Psma6 PE=1 SV=1"	"0"	"2"	"2"	"0.5294"	"0.0000"	"1"	"1"	"1"	"814.45154"	"1627.89580"	"1627.89432"	"0.91"	"0.00074"	"7/104"	"7"	"104"	"425678.099731445"	"HCD"	"MS2"	"7.96247"	"44.1"	"100.000"	"69.0775"	"23097"	"23097"	"23077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.9"	""	"42.3"	""	"47.6"	""	"85.8"	"0.5"	"93.1"	"84.9"	""	"922"	"34"	"36.000"	"29.000"	"0.0190853850091896"	""	"0"	"0.0001472"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGMPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"814.88812"	"1628.76897"	"1628.77223"	"-2.00"	"-0.00163"	"19/134"	"19"	"134"	"254349.211608887"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"38.3420"	"10626"	"10626"	"10596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	""	"8.0"	""	"13.0"	""	"30.7"	""	"38.7"	"23.7"	""	"496"	"58"	"33.000"	"26.000"	"3.96690391096438E-05"	"16"	"0"	"5.367E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGmPR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.6750"	"0.0000"	"1"	"1"	"1"	"814.88892"	"1628.77056"	"1628.77223"	"-1.03"	"-0.00084"	"9/134"	"9"	"134"	"225500.989196777"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"36.6489"	"9901"	"9901"	"9879"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"6.8"	""	"8.4"	""	"26.1"	""	"25.0"	"26.3"	""	"502"	"40"	"33.000"	"27.000"	"0.00278402878630863"	"19"	"0"	"0.0001099"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGmTGYGMPR.[Q]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"814.88928"	"1628.77129"	"1628.77223"	"-0.58"	"-0.00047"	"15/134"	"15"	"134"	"219285.33605957"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"38.4569"	"10637"	"10637"	"10610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.1"	""	"12.1"	""	"8.9"	""	"19.5"	""	"28.6"	"26.1"	""	"504"	"49"	"34.000"	"27.000"	"0.000326137352045396"	"16"	"0"	"0.0002103"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GASQAGMTGYGMPR"	"[RK].gASQAGMTGYGmPR.[Q]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"2"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0; P37805"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1; Transgelin-3 OS=Rattus norvegicus OX=10116 GN=Tagln3 PE=1 SV=2"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"814.89056"	"1628.77385"	"1628.77223"	"1.00"	"0.00081"	"7/134"	"7"	"134"	"208708.405883789"	"HCD"	"MS2"	"100"	"9.2"	"100.000"	"36.4772"	"9869"	"9869"	"9846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.0"	""	"6.8"	""	"9.1"	""	"16.5"	""	"26.3"	"20.8"	""	"539"	"19"	"34.000"	"27.000"	"0.373730695880974"	"14"	"0.0001686"	"0.001096"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMEDLMSSK"	"[R].tEMEDLMSSk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"814.91809"	"1628.82891"	"1628.82757"	"0.82"	"0.00067"	"12/88"	"12"	"88"	"165923.760437012"	"HCD"	"MS2"	"10.0035"	"17.4"	"100.000"	"92.9896"	"32761"	"32761"	"32739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"20.5"	""	"23.4"	""	"21.7"	""	"45.7"	"37.2"	""	"812"	"36"	"36.000"	"29.000"	"0.0106543272861408"	"22"	"0.0001991"	"0.002077"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEMEDLMSSK"	"[R].tEMEDLMSSk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"814.91815"	"1628.82903"	"1628.82757"	"0.90"	"0.00073"	"10/88"	"10"	"88"	"187352.849731445"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"93.0492"	"32749"	"32749"	"32727"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"21.9"	""	"20.1"	""	"20.8"	""	"43.0"	"41.1"	""	"815"	"29"	"36.000"	"29.000"	"0.0539669175591826"	"19"	"0.0001686"	"0.001965"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAPTSSPSITAPR"	"[K].nTAPTSSPSITAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"814.94354"	"1628.87981"	"1628.88051"	"-0.43"	"-0.00035"	"9/148"	"9"	"148"	"254440.647399902"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"41.0874"	"11737"	"11737"	"11716"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"17.1"	""	"21.2"	""	"14.9"	""	"22.8"	"25.8"	""	"977"	"49"	"36.000"	"29.000"	"0.000563461916445603"	"23"	"0"	"0.0001362"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAPTSSPSITAPR"	"[K].nTAPTSSPSITAPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"Q9QX79"	"Fetuin-B OS=Rattus norvegicus OX=10116 GN=Fetub PE=2 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"814.94360"	"1628.87993"	"1628.88051"	"-0.36"	"-0.00029"	"5/148"	"5"	"148"	"222561.107971191"	"HCD"	"MS2"	"100"	"11.6"	"100.000"	"41.2680"	"11773"	"11773"	"11746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.5"	""	"18.2"	""	"16.2"	""	"14.6"	""	"26.8"	"23.6"	""	"977"	"23"	"36.000"	"29.000"	"0.26968982908865"	"21"	"0.0001991"	"0.002904"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIQLVEEELDR"	"[R].rIQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"543.64386"	"1628.91703"	"1628.91690"	"0.08"	"0.00004"	"9/108"	"9"	"108"	"2120891.75506592"	"HCD"	"MS2"	"43.52993"	"41.2"	"100.000"	"75.2035"	"25580"	"25580"	"25564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"42.5"	""	"42.3"	""	"81.3"	""	"88.2"	"86.8"	""	"868"	"42"	"36.000"	"29.000"	"0.00303731426264987"	"18"	"0"	"3.938E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RIQLVEEELDR"	"[R].rIQLVEEELDR.[A]"	"N-Term(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"543.64386"	"1628.91703"	"1628.91690"	"0.08"	"0.00004"	"8/108"	"8"	"108"	"1929477.14953613"	"HCD"	"MS2"	"44.61954"	"39.0"	"100.000"	"75.0827"	"25500"	"25500"	"25476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"44.6"	""	"45.8"	""	"68.7"	"1.8"	"87.8"	"76.2"	""	"868"	"43"	"36.000"	"29.000"	"0.00208684277227182"	"18"	"0"	"3.513E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELNPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"543.64655"	"1628.92508"	"1628.92596"	"-0.54"	"-0.00029"	"9/96"	"9"	"96"	"876910.712463379"	"HCD"	"MS2"	"27.7039"	"25.8"	"100.000"	"72.5494"	"24471"	"24471"	"24448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"34.1"	""	"31.5"	""	"46.9"	""	"46.8"	"45.3"	""	"849"	"32"	"36.000"	"29.000"	"0.0246534495237797"	"22"	"9.9E-05"	"0.0004989"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELNPk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"543.64673"	"1628.92563"	"1628.92596"	"-0.20"	"-0.00011"	"9/96"	"9"	"96"	"889492.717712402"	"HCD"	"MS2"	"30.39951"	"25.8"	"100.000"	"72.6591"	"24545"	"24545"	"24526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.1"	""	"38.8"	""	"34.4"	""	"42.2"	""	"45.1"	"50.9"	""	"845"	"24"	"36.000"	"29.000"	"0.156252405957162"	"16"	"9.9E-05"	"0.0004041"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAPTTSGGLNK"	"[K].qPAPTTSGGLNk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9706"	"0.0000"	"1"	"1"	"1"	"814.97137"	"1628.93547"	"1628.93719"	"-1.05"	"-0.00086"	"11/114"	"11"	"114"	"204215.126037598"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"42.2946"	"12224"	"12224"	"12199"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"18.3"	""	"12.3"	""	"30.7"	""	"37.3"	"27.4"	""	"850"	"68"	"36.000"	"29.000"	"6.41784065519765E-06"	"19"	"0"	"1.426E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAPTTSGGLNK"	"[K].qPAPTTSGGLNk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9623"	"0.0000"	"1"	"1"	"1"	"814.97150"	"1628.93572"	"1628.93719"	"-0.91"	"-0.00074"	"7/114"	"7"	"114"	"208088.331848145"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"42.4856"	"12268"	"12268"	"12240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"9.3"	""	"13.5"	""	"38.6"	""	"38.9"	"23.5"	""	"840"	"53"	"36.000"	"29.000"	"0.000210498638123454"	"18"	"9.9E-05"	"0.0006679"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGHLPIEVK"	"[K].yDGHLPIEVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"543.65204"	"1628.94156"	"1628.94121"	"0.21"	"0.00012"	"8/84"	"8"	"84"	"888971.356445313"	"HCD"	"MS2"	"77.98862"	"27.1"	"100.000"	"83.7946"	"29028"	"29028"	"29009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.3"	""	"36.0"	""	"40.9"	""	"47.5"	"0.8"	"45.6"	"48.5"	""	"821"	"10"	"36.000"	"29.000"	"3.75243485623538"	"14"	"0.0001686"	"0.001564"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGHLPIEVK"	"[K].yDGHLPIEVk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"Q80Z29"	"Nicotinamide phosphoribosyltransferase OS=Rattus norvegicus OX=10116 GN=Nampt PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"543.65234"	"1628.94248"	"1628.94121"	"0.78"	"0.00042"	"9/84"	"9"	"84"	"974470.881652832"	"HCD"	"MS2"	"58.41279"	"27.0"	"100.000"	"83.8213"	"29068"	"29068"	"29048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.0"	""	"37.8"	""	"33.7"	""	"46.1"	""	"55.4"	"49.2"	""	"818"	"15"	"36.000"	"29.000"	"1.31741713563492"	"15"	"0.0001991"	"0.002082"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"543.94183"	"1629.81095"	"1629.81104"	"-0.06"	"-0.00003"	"8/98"	"8"	"98"	"1002554.35021973"	"HCD"	"MS2"	"7.756851"	"19.0"	"100.000"	"100.5132"	"35773"	"35773"	"35755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"23.0"	""	"17.8"	""	"40.8"	""	"36.6"	"34.4"	""	"694"	"16"	"35.000"	"28.000"	"0.881717528825609"	"23"	"0.0001991"	"0.00478"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"543.94183"	"1629.81095"	"1629.81104"	"-0.06"	"-0.00003"	"10/98"	"10"	"98"	"1368005.41546631"	"HCD"	"MS2"	"11.68009"	"20.3"	"100.000"	"100.6739"	"35866"	"35866"	"35848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"23.1"	""	"24.9"	""	"42.0"	""	"38.8"	"38.1"	""	"694"	"14"	"35.000"	"28.000"	"1.28922724496719"	"17"	"0.0009352"	"0.008251"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"815.40918"	"1629.81108"	"1629.81104"	"0.03"	"0.00002"	"9/98"	"9"	"98"	"4507681.36151123"	"HCD"	"MS2"	"0.41946"	"210.5"	"100.000"	"100.6265"	"35820"	"35820"	"35803"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"319.1"	""	"235.1"	""	"225.2"	""	"403.8"	""	"396.0"	"417.9"	""	"694"	"18"	"35.000"	"28.000"	"0.501567600448837"	"19"	"9.9E-05"	"0.0005753"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"815.40961"	"1629.81194"	"1629.81104"	"0.55"	"0.00045"	"9/98"	"9"	"98"	"3671759.76916504"	"HCD"	"MS2"	"1.272455"	"180.6"	"100.000"	"100.7752"	"35907"	"35907"	"35893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"274.5"	""	"210.1"	""	"204.1"	""	"321.4"	""	"340.0"	"362.0"	""	"720"	"20"	"35.000"	"28.000"	"0.368385477221071"	"15"	"9.9E-05"	"0.0008998"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGGDEIPYSPFR"	"[K].yGGDEIPYSPFR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"815.40991"	"1629.81255"	"1629.81104"	"0.93"	"0.00075"	"8/98"	"8"	"98"	"986401.05859375"	"HCD"	"MS2"	"22.46572"	"56.1"	"100.000"	"100.4868"	"35790"	"35790"	"35769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.2"	""	"60.2"	""	"63.0"	""	"100.9"	"0.7"	"112.5"	"111.3"	""	"720"	"19"	"35.000"	"28.000"	"0.431819749133776"	"19"	"9.9E-05"	"0.0005572"	"0.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELnPk.[G]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"815.44727"	"1629.88725"	"1629.90997"	"-13.94"	"-0.01136"	"9/96"	"9"	"96"	"203845.260253906"	"HCD"	"MS2"	"38.81231"	"16.6"	"100.000"	"72.7881"	"24598"	"24598"	"24568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"24.2"	""	"22.1"	""	"24.9"	"1.3"	"26.8"	"35.5"	""	"983"	"7"	"36.000"	"29.000"	"9.89745468807365"	"17"	"0.007563"	"0.09673"	"0.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAAVEELNPK"	"[K].eAAAVEELnPk.[G]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"Q5U2Z3"	"Nucleosome assembly protein 1-like 4 OS=Rattus norvegicus OX=10116 GN=Nap1l4 PE=1 SV=1"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"543.96790"	"1629.88913"	"1629.90997"	"-12.79"	"-0.00695"	"7/96"	"7"	"96"	"829416.015258789"	"HCD"	"MS2"	"52.25338"	"19.2"	"100.000"	"72.6946"	"24530"	"24530"	"24509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.7"	""	"21.8"	""	"22.5"	""	"26.9"	""	"42.1"	"43.5"	""	"961"	"9"	"36.000"	"29.000"	"6.36346107661036"	"19"	"0.001872"	"0.0154"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREGEVEVLK"	"[K].iREGEVEVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.0526"	"0.0000"	"1"	"1"	"1"	"544.00287"	"1629.99405"	"1629.99398"	"0.05"	"0.00003"	"4/96"	"4"	"96"	"828179.92767334"	"HCD"	"MS2"	"16.32589"	"38.0"	"100.000"	"65.8226"	"21745"	"21745"	"21723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.9"	""	"66.6"	""	"62.2"	""	"72.4"	""	"62.3"	"59.0"	""	"605"	"19"	"34.000"	"27.000"	"0.397855511738152"	"21"	"0.0001991"	"0.002504"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IREGEVEVLK"	"[K].iREGEVEVLk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"544.00287"	"1629.99405"	"1629.99398"	"0.05"	"0.00003"	"5/96"	"5"	"96"	"1220667.394104"	"HCD"	"MS2"	"25.16342"	"51.8"	"100.000"	"65.7179"	"21736"	"21736"	"21710"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.4"	""	"85.6"	""	"82.4"	"3.0"	"105.7"	""	"85.8"	"66.4"	""	"605"	"14"	"34.000"	"27.000"	"1.30534520740399"	"25"	"0.0001686"	"0.001628"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLYGTLDPNTR"	"[K].dHLYGTLDPNTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"544.28375"	"1630.83670"	"1630.83865"	"-1.19"	"-0.00065"	"13/112"	"13"	"112"	"3172224.20977783"	"HCD"	"MS2"	"10.16778"	"48.5"	"100.000"	"47.9911"	"14540"	"14540"	"14517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.1"	""	"60.4"	""	"65.0"	""	"75.7"	"3.0"	"101.5"	"86.7"	""	"884"	"31"	"36.000"	"29.000"	"0.0332217319156047"	"19"	"0"	"2.29E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHLYGTLDPNTR"	"[K].dHLYGTLDPNTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.28400"	"1630.83744"	"1630.83865"	"-0.74"	"-0.00040"	"9/112"	"9"	"112"	"2960370.9777832"	"HCD"	"MS2"	"15.58111"	"66.3"	"100.000"	"48.2997"	"14628"	"14628"	"14605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.1"	""	"84.5"	""	"89.0"	""	"111.0"	"2.7"	"127.0"	"118.7"	""	"899"	"23"	"36.000"	"29.000"	"0.221171771288812"	"14"	"0"	"0.0001684"	"0.607"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELSSGHNWK"	"[K].dELSSGHNWk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"544.29114"	"1630.85886"	"1630.85894"	"-0.05"	"-0.00003"	"11/84"	"11"	"84"	"5887431.98028564"	"HCD"	"MS2"	"9.161678"	"177.6"	"100.000"	"47.3724"	"14250"	"14250"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"213.3"	""	"188.8"	""	"196.3"	""	"289.1"	"9.5"	"400.3"	"391.6"	""	"1021"	"42"	"37.000"	"30.000"	"0.00339621946240989"	"20"	"0"	"1.526E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DELSSGHNWK"	"[K].dELSSGHNWk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"Q00238"	"Intercellular adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Icam1 PE=2 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"544.29138"	"1630.85959"	"1630.85894"	"0.40"	"0.00022"	"8/84"	"8"	"84"	"5957106.85162354"	"HCD"	"MS2"	"5.403605"	"188.8"	"100.000"	"46.9951"	"14134"	"14134"	"14113"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.9"	""	"195.0"	""	"207.4"	""	"294.1"	"5.9"	"421.2"	"449.7"	""	"1023"	"40"	"37.000"	"30.000"	"0.00499856838518897"	"19"	"0"	"2.666E-05"	"0.772"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"544.29340"	"1630.86563"	"1630.86717"	"-0.94"	"-0.00051"	"12/114"	"12"	"114"	"453578.596069336"	"HCD"	"MS2"	"15.83455"	"12.2"	"100.000"	"88.3913"	"30873"	"30873"	"30855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"17.4"	""	"15.5"	""	"16.5"	"1.3"	"28.1"	"23.0"	""	"1037"	"37"	"37.000"	"30.000"	"0.00943514895189277"	"22"	"0"	"0.0003462"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.93689"	"1630.86650"	"1630.86717"	"-0.41"	"-0.00034"	"17/114"	"17"	"114"	"350789.268737793"	"HCD"	"MS2"	"6.136734"	"16.8"	"100.000"	"88.5019"	"30917"	"30917"	"30900"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.1"	""	"22.4"	""	"19.6"	""	"39.2"	""	"30.0"	"28.7"	""	"1038"	"42"	"37.000"	"30.000"	"0.00312009169753821"	"15"	"0.002711"	"0.02873"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"544.29370"	"1630.86655"	"1630.86717"	"-0.38"	"-0.00021"	"10/114"	"10"	"114"	"319754.364440918"	"HCD"	"MS2"	"6.317787"	"7.7"	"100.000"	"88.3162"	"30882"	"30882"	"30861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.4"	""	"11.5"	""	"7.5"	""	"11.6"	""	"16.8"	"15.9"	""	"1038"	"33"	"37.000"	"30.000"	"0.0244437232400018"	"28"	"9.9E-05"	"0.0007704"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"815.93707"	"1630.86687"	"1630.86717"	"-0.19"	"-0.00015"	"9/114"	"9"	"114"	"464732.155334473"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"87.3414"	"30486"	"30486"	"30468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"19.8"	""	"22.5"	""	"45.3"	"0.8"	"31.0"	"33.3"	""	"1041"	"53"	"37.000"	"30.000"	"0.000233034774823797"	"24"	"0"	"0.0002079"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"544.29388"	"1630.86710"	"1630.86717"	"-0.05"	"-0.00002"	"11/114"	"11"	"114"	"322374.016052246"	"HCD"	"MS2"	"28.56833"	"8.2"	"100.000"	"87.2545"	"30417"	"30417"	"30398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"8.3"	""	"13.3"	""	"15.0"	""	"15.9"	"14.4"	""	"1041"	"45"	"37.000"	"30.000"	"0.00169598002871546"	"24"	"0"	"0.0003074"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.93719"	"1630.86711"	"1630.86717"	"-0.04"	"-0.00003"	"9/114"	"9"	"114"	"137024.825256348"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"88.2048"	"30798"	"30798"	"30772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"4.9"	""	"7.9"	""	"14.0"	""	"11.4"	"10.4"	""	"1041"	"25"	"37.000"	"30.000"	"0.16688631834051"	"14"	"0.008289"	"0.1056"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"815.93719"	"1630.86711"	"1630.86717"	"-0.04"	"-0.00003"	"13/114"	"13"	"114"	"186343.145812988"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"88.1343"	"30808"	"30808"	"30783"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.4"	""	"9.3"	""	"9.5"	""	"20.1"	""	"13.7"	"16.4"	""	"1041"	"41"	"37.000"	"30.000"	"0.00463896113298615"	"19"	"0.002419"	"0.02276"	"0.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"815.93719"	"1630.86711"	"1630.86717"	"-0.04"	"-0.00003"	"14/114"	"14"	"114"	"419453.351745605"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"87.3978"	"30474"	"30474"	"30460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"16.8"	""	"22.3"	""	"37.1"	""	"27.4"	"25.6"	""	"1041"	"44"	"37.000"	"30.000"	"0.00191611130780938"	"20"	"0"	"0.000352"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"0.8491"	"0.0000"	"1"	"1"	"1"	"815.93726"	"1630.86724"	"1630.86717"	"0.04"	"0.00003"	"8/114"	"8"	"114"	"383668.202697754"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"88.4359"	"30930"	"30930"	"30912"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"13.2"	""	"18.6"	""	"39.2"	""	"26.0"	"26.3"	""	"1040"	"53"	"37.000"	"30.000"	"0.000283141379478059"	"24"	"0"	"7.024E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.93750"	"1630.86772"	"1630.86717"	"0.34"	"0.00028"	"10/114"	"10"	"114"	"183200.16229248"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"87.1114"	"30360"	"30360"	"30331"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.4"	""	"9.0"	""	"10.0"	""	"16.3"	""	"12.8"	"18.5"	""	"1066"	"30"	"37.000"	"30.000"	"0.0497424542324796"	"14"	"0.002508"	"0.0235"	"0.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"544.29425"	"1630.86820"	"1630.86717"	"0.63"	"0.00034"	"8/114"	"8"	"114"	"237493.533203125"	"HCD"	"MS2"	"27.30742"	"8.8"	"100.000"	"88.7277"	"31009"	"31009"	"30982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"8.5"	""	"14.5"	""	"14.6"	""	"16.2"	"15.6"	""	"1056"	"16"	"37.000"	"30.000"	"1.35716897330196"	"22"	"0.0008247"	"0.007632"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMNVIGEPIDER"	"[R].imNVIGEPIDER.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"0.7586"	"0.0000"	"1"	"1"	"1"	"544.29510"	"1630.87076"	"1630.86717"	"2.20"	"0.00120"	"9/114"	"9"	"114"	"465941.129760742"	"HCD"	"MS2"	"41.82474"	"11.3"	"100.000"	"87.1638"	"30415"	"30415"	"30395"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.8"	""	"10.4"	""	"16.8"	""	"20.7"	""	"16.2"	"26.7"	""	"1064"	"29"	"37.000"	"30.000"	"0.0704549696723562"	"21"	"0.0001686"	"0.001166"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGnAIDGk.[G]"	"N-Term(TMT6plex); N7(Deamidated); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"815.97375"	"1630.94023"	"1630.94161"	"-0.84"	"-0.00069"	"11/112"	"11"	"112"	"149025.560791016"	"HCD"	"MS2"	"21.19504"	"10.9"	"100.000"	"99.1788"	"35260"	"35260"	"35244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"15.5"	""	"11.3"	""	"17.7"	""	"23.7"	"19.9"	""	"933"	"39"	"36.000"	"29.000"	"0.00612141252892458"	"21"	"0.0001991"	"0.004414"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGnAIDGk.[G]"	"N-Term(TMT6plex); N7(Deamidated); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"815.97406"	"1630.94084"	"1630.94161"	"-0.47"	"-0.00038"	"16/112"	"16"	"112"	"203893.262390137"	"HCD"	"MS2"	"27.46797"	"16.0"	"100.000"	"99.1455"	"35217"	"35217"	"35199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.5"	""	"19.4"	""	"23.6"	""	"21.7"	"0.9"	"30.4"	"30.5"	""	"965"	"50"	"36.000"	"29.000"	"0.000437015979933382"	"21"	"0"	"1.854E-06"	"1.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGnAIDGk.[G]"	"N-Term(TMT6plex); N7(Deamidated); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"544.31903"	"1630.94254"	"1630.94161"	"0.57"	"0.00031"	"11/112"	"11"	"112"	"391036.182678223"	"HCD"	"MS2"	"20.331"	"15.2"	"100.000"	"99.2248"	"35279"	"35279"	"35255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"18.9"	""	"19.3"	""	"30.7"	""	"26.8"	"32.8"	""	"945"	"47"	"36.000"	"29.000"	"0.000987192421828534"	"21"	"0"	"4.186E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDALGNAIDGK"	"[R].vVDALGnAIDGk.[G]"	"N-Term(TMT6plex); N7(Deamidated); K12(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"544.31952"	"1630.94400"	"1630.94161"	"1.47"	"0.00080"	"12/112"	"12"	"112"	"433165.682434082"	"HCD"	"MS2"	"40.95185"	"15.4"	"100.000"	"99.1615"	"35224"	"35224"	"35199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"18.7"	""	"23.3"	""	"25.5"	"1.3"	"29.0"	"32.9"	""	"931"	"57"	"36.000"	"29.000"	"8.43178813114425E-05"	"22"	"0"	"3.132E-06"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"816.38586"	"1631.76445"	"1631.76515"	"-0.43"	"-0.00035"	"8/120"	"8"	"120"	"611014.685241699"	"HCD"	"MS2"	"18.10813"	"40.9"	"100.000"	"83.4968"	"28908"	"28908"	"28896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.8"	""	"52.5"	""	"43.9"	""	"58.8"	""	"91.0"	"102.1"	""	"420"	"37"	"33.000"	"26.000"	"0.0043173702515667"	"22"	"0"	"4.82E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.59302"	"1631.76450"	"1631.76515"	"-0.40"	"-0.00022"	"13/120"	"13"	"120"	"844146.279174805"	"HCD"	"MS2"	"48.7225"	"35.5"	"100.000"	"83.1834"	"28781"	"28781"	"28763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"35.9"	""	"46.7"	""	"69.9"	""	"79.9"	"72.2"	""	"420"	"18"	"33.000"	"26.000"	"0.353361552824798"	"14"	"0"	"0.0003932"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"544.59308"	"1631.76468"	"1631.76515"	"-0.29"	"-0.00016"	"14/120"	"14"	"120"	"995257.521911621"	"HCD"	"MS2"	"45.82568"	"43.9"	"100.000"	"83.2243"	"28826"	"28826"	"28810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.8"	""	"49.1"	""	"61.9"	""	"76.8"	"0.5"	"89.4"	"94.6"	""	"420"	"22"	"33.000"	"26.000"	"0.148668614720669"	"14"	"0"	"0.0002349"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"816.38605"	"1631.76482"	"1631.76515"	"-0.20"	"-0.00017"	"10/120"	"10"	"120"	"1504431.58337402"	"HCD"	"MS2"	"10.00355"	"84.0"	"100.000"	"83.2133"	"28793"	"28793"	"28775"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.4"	""	"84.6"	""	"83.9"	""	"138.4"	""	"204.6"	"201.2"	""	"420"	"60"	"33.000"	"26.000"	"1.95082941223786E-05"	"24"	"0"	"3.926E-08"	"1.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.38611"	"1631.76494"	"1631.76515"	"-0.13"	"-0.00011"	"10/120"	"10"	"120"	"613108.835205078"	"HCD"	"MS2"	"19.02503"	"41.5"	"100.000"	"83.5353"	"28952"	"28952"	"28940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.2"	""	"47.5"	""	"37.2"	""	"68.0"	""	"94.7"	"101.4"	""	"424"	"52"	"33.000"	"26.000"	"0.000122838883642499"	"16"	"0"	"1.052E-07"	"1.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.38617"	"1631.76506"	"1631.76515"	"-0.05"	"-0.00004"	"7/120"	"7"	"120"	"286934.324829102"	"HCD"	"MS2"	"45.7993"	"26.0"	"100.000"	"82.9160"	"28673"	"28673"	"28645"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"28.0"	""	"30.5"	""	"40.7"	""	"64.2"	"60.0"	""	"424"	"14"	"33.000"	"26.000"	"0.769725476112615"	"13"	"0.000264"	"0.006137"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"816.38623"	"1631.76518"	"1631.76515"	"0.02"	"0.00002"	"7/120"	"7"	"120"	"273476.150024414"	"HCD"	"MS2"	"47.15041"	"21.1"	"100.000"	"82.9544"	"28717"	"28717"	"28688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.8"	""	"24.9"	""	"24.5"	""	"33.0"	"0.6"	"40.3"	"46.0"	""	"424"	"20"	"33.000"	"26.000"	"0.223015917250523"	"15"	"0.0001991"	"0.003123"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDGFSDTGAYWR"	"[R].qDGFSDTGAYWR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"816.38623"	"1631.76518"	"1631.76515"	"0.02"	"0.00002"	"10/120"	"10"	"120"	"1486632.61523438"	"HCD"	"MS2"	"9.727257"	"86.3"	"100.000"	"83.2519"	"28837"	"28837"	"28820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.6"	""	"92.5"	""	"84.7"	""	"133.7"	""	"197.0"	"214.1"	""	"424"	"59"	"33.000"	"26.000"	"2.70605027468005E-05"	"24"	"0"	"3.704E-08"	"1.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHECDLQTER"	"[R].iLHEcDLQTER.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"544.60699"	"1631.80643"	"1631.80828"	"-1.13"	"-0.00062"	"12/98"	"12"	"98"	"926679.555847168"	"HCD"	"MS2"	"73.41246"	"16.3"	"100.000"	"77.5392"	"26493"	"26493"	"26478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.6"	""	"19.5"	""	"24.0"	""	"22.2"	""	"33.9"	"32.5"	""	"665"	"37"	"35.000"	"28.000"	"0.00643860303012246"	"17"	"0"	"5.299E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHECDLQTER"	"[R].iLHEcDLQTER.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"544.60712"	"1631.80680"	"1631.80828"	"-0.91"	"-0.00049"	"9/98"	"9"	"98"	"2585587.69543457"	"HCD"	"MS2"	"1.712353"	"28.6"	"100.000"	"77.8425"	"26616"	"26616"	"26597"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"37.8"	""	"38.3"	""	"46.7"	"1.8"	"58.5"	"54.3"	""	"668"	"29"	"35.000"	"28.000"	"0.039971133745662"	"16"	"0"	"0.000142"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHECDLQTER"	"[R].iLHEcDLQTER.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"544.60724"	"1631.80716"	"1631.80828"	"-0.68"	"-0.00037"	"9/98"	"9"	"98"	"2469492.95007324"	"HCD"	"MS2"	"6.565932"	"23.1"	"100.000"	"77.9922"	"26704"	"26704"	"26685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.5"	""	"29.4"	""	"45.2"	""	"31.1"	""	"43.7"	"42.8"	""	"672"	"55"	"35.000"	"28.000"	"9.49159671571677E-05"	"19"	"0"	"2.509E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILHECDLQTER"	"[R].iLHEcDLQTER.[L]"	"N-Term(TMT6plex); C5(Methylthio)"	"1"	"1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"Q9Z1J8"	"SEC14-like protein 3 OS=Rattus norvegicus OX=10116 GN=Sec14l3 PE=1 SV=1"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"544.60791"	"1631.80918"	"1631.80828"	"0.55"	"0.00030"	"15/98"	"15"	"98"	"1221150.26043701"	"HCD"	"MS2"	"18.32629"	"16.5"	"100.000"	"77.6843"	"26579"	"26579"	"26567"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"23.8"	""	"21.7"	""	"26.9"	""	"31.7"	"34.2"	""	"679"	"45"	"35.000"	"28.000"	"0.00102291554521119"	"19"	"0"	"6.512E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDELTLEGIK"	"[K].rDELTLEGIk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"1"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"544.66217"	"1631.97196"	"1631.97324"	"-0.79"	"-0.00043"	"7/100"	"7"	"100"	"2652561.87536621"	"HCD"	"MS2"	"47.20717"	"87.1"	"100.000"	"75.4229"	"25669"	"25669"	"25651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.0"	""	"92.5"	""	"91.1"	""	"174.5"	""	"185.5"	"202.4"	""	"798"	"20"	"36.000"	"29.000"	"0.390816504178071"	"15"	"0"	"4.513E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDELTLEGIK"	"[K].rDELTLEGIk.[Q]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"Q3B8Q2"	"Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1"	"1"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"544.66260"	"1631.97324"	"1631.97324"	"0.00"	"0.00000"	"11/100"	"11"	"100"	"2275347.793396"	"HCD"	"MS2"	"49.35003"	"79.0"	"100.000"	"75.1818"	"25540"	"25540"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.6"	""	"78.6"	""	"88.0"	""	"152.6"	""	"170.3"	"168.5"	""	"806"	"19"	"36.000"	"29.000"	"0.547400318974623"	"19"	"0"	"5.908E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEmTEILk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.98566"	"1632.96404"	"1632.96465"	"-0.38"	"-0.00031"	"8/78"	"8"	"78"	"287323.028137207"	"HCD"	"MS2"	"35.48949"	"19.6"	"100.000"	"92.3170"	"32493"	"32493"	"32465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"23.7"	""	"19.5"	""	"59.4"	""	"33.4"	"30.3"	""	"833"	"47"	"36.000"	"29.000"	"0.00091540863701488"	"15"	"0.0001991"	"0.004499"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEmTEILk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.98633"	"1632.96538"	"1632.96465"	"0.45"	"0.00036"	"9/78"	"9"	"78"	"712319.525817871"	"HCD"	"MS2"	"6.576958"	"38.9"	"100.000"	"92.6615"	"32598"	"32598"	"32583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"35.1"	""	"46.7"	""	"118.3"	""	"74.0"	"62.3"	""	"778"	"54"	"35.000"	"28.000"	"0.000146875582269987"	"16"	"0.0009964"	"0.008468"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEmTEILk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.98663"	"1632.96599"	"1632.96465"	"0.82"	"0.00067"	"9/78"	"9"	"78"	"554626.229797363"	"HCD"	"MS2"	"5.531561"	"31.3"	"100.000"	"92.6304"	"32621"	"32621"	"32604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"27.8"	""	"29.5"	""	"97.2"	""	"56.2"	"55.8"	""	"780"	"57"	"35.000"	"28.000"	"7.01559656900226E-05"	"16"	"0.0001991"	"0.004395"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVPEMTEILK"	"[K].vVPEmTEILk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K10(TMT6plex)"	"1"	"1"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"P13803"	"Electron transfer flavoprotein subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Etfa PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"816.98669"	"1632.96611"	"1632.96465"	"0.89"	"0.00073"	"8/78"	"8"	"78"	"212653.452880859"	"HCD"	"MS2"	"27.72614"	"14.5"	"100.000"	"92.3801"	"32483"	"32483"	"32457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"14.2"	""	"19.5"	""	"37.8"	""	"25.0"	"24.5"	""	"779"	"45"	"35.000"	"28.000"	"0.0012546062942049"	"16"	"0.0001991"	"0.003157"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFQFQEEGK"	"[K].yFQFQEEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"545.29218"	"1633.86197"	"1633.86263"	"-0.40"	"-0.00022"	"8/78"	"8"	"78"	"507317.840393066"	"HCD"	"MS2"	"46.58527"	"19.8"	"100.000"	"92.0390"	"32345"	"32345"	"32318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.7"	""	"22.6"	""	"26.2"	""	"25.9"	"0.4"	"40.8"	"46.2"	""	"978"	"12"	"36.000"	"29.000"	"3.32130576349803"	"14"	"0.002328"	"0.0222"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFQFQEEGK"	"[K].yFQFQEEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"817.43500"	"1633.86272"	"1633.86263"	"0.05"	"0.00004"	"10/78"	"10"	"78"	"149808.717895508"	"HCD"	"MS2"	"22.76917"	"14.2"	"100.000"	"91.9392"	"32340"	"32340"	"32310"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"18.4"	""	"14.2"	""	"25.6"	""	"33.5"	"30.4"	""	"991"	"27"	"36.000"	"29.000"	"0.0937656263038584"	"15"	"0.0001991"	"0.002494"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFQFQEEGK"	"[K].yFQFQEEGk.[E]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"3"	"817.43604"	"1633.86479"	"1633.86263"	"1.32"	"0.00108"	"5/78"	"5"	"78"	"141682.979248047"	"HCD"	"MS2"	"29.23085"	"14.8"	"100.000"	"91.9953"	"32327"	"32327"	"32302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"16.5"	""	"15.1"	""	"22.1"	""	"33.4"	"34.0"	""	"1026"	"8"	"37.000"	"30.000"	"8.67196197932994"	"14"	"0.007872"	"0.1002"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYVTIIDAPGHR"	"[K].yYVTIIDAPGHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.30048"	"1633.88687"	"1633.88996"	"-1.89"	"-0.00103"	"9/94"	"9"	"94"	"425296.123168945"	"HCD"	"MS2"	"17.76666"	"10.3"	"100.000"	"80.6537"	"27760"	"27760"	"27736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"15.8"	""	"14.5"	""	"14.7"	""	"20.6"	"19.3"	""	"1064"	"35"	"37.000"	"30.000"	"0.0186170828859086"	"15"	"0"	"3.901E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YYVTIIDAPGHR"	"[K].yYVTIIDAPGHR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.30121"	"1633.88907"	"1633.88996"	"-0.54"	"-0.00030"	"9/94"	"9"	"94"	"430563.560913086"	"HCD"	"MS2"	"18.56879"	"9.3"	"100.000"	"80.7389"	"27822"	"27822"	"27795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"12.6"	""	"11.3"	""	"15.0"	""	"19.0"	"22.0"	""	"1076"	"28"	"37.000"	"30.000"	"0.0770517089809167"	"14"	"0"	"0.0001722"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDETIGWIK"	"[R].dVDETIGWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"545.31067"	"1633.91745"	"1633.92014"	"-1.65"	"-0.00090"	"11/80"	"11"	"80"	"694053.319641113"	"HCD"	"MS2"	"9.502076"	"19.6"	"100.000"	"110.4737"	"39712"	"39712"	"39692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"22.7"	""	"29.8"	""	"27.3"	""	"35.7"	"43.0"	""	"1043"	"34"	"37.000"	"30.000"	"0.0210016933400727"	"24"	"0"	"0.0003924"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDETIGWIK"	"[R].dVDETIGWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.6269"	"0.0000"	"1"	"1"	"1"	"817.46246"	"1633.91765"	"1633.92014"	"-1.53"	"-0.00125"	"9/80"	"9"	"80"	"237973.750732422"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"110.3114"	"39633"	"39633"	"39607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"26.6"	""	"23.6"	""	"26.1"	""	"40.4"	"54.0"	""	"1043"	"67"	"37.000"	"30.000"	"9.89132137911613E-06"	""	"0"	"1.692E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDETIGWIK"	"[R].dVDETIGWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"545.31122"	"1633.91910"	"1633.92014"	"-0.64"	"-0.00035"	"11/80"	"11"	"80"	"722735.655944824"	"HCD"	"MS2"	"6.844009"	"21.2"	"100.000"	"110.3461"	"39647"	"39647"	"39623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"30.4"	""	"27.2"	""	"30.1"	"0.8"	"32.5"	"48.7"	""	"1042"	"36"	"37.000"	"30.000"	"0.0129371234785899"	"28"	"9.9E-05"	"0.0007712"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDETIGWIK"	"[R].dVDETIGWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"817.46332"	"1633.91936"	"1633.92014"	"-0.48"	"-0.00039"	"7/80"	"7"	"80"	"262539.224304199"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"110.4826"	"39716"	"39716"	"39692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"34.2"	""	"28.4"	""	"29.0"	""	"45.4"	"64.8"	""	"1042"	"30"	"37.000"	"30.000"	"0.0551871190817368"	"23"	"0.0001686"	"0.001615"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"817.47296"	"1633.93865"	"1633.94127"	"-1.61"	"-0.00131"	"7/94"	"7"	"94"	"256783.054626465"	"HCD"	"MS2"	"15.09598"	"19.6"	"100.000"	"100.8083"	"35894"	"35894"	"35865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"22.4"	""	"16.8"	""	"46.8"	""	"44.2"	"45.2"	""	"932"	"34"	"36.000"	"29.000"	"0.0177986030211462"	"24"	"0"	"0.0002412"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8356"	"0.0000"	"1"	"1"	"1"	"817.47357"	"1633.93987"	"1633.94127"	"-0.86"	"-0.00070"	"10/94"	"10"	"94"	"265280.044616699"	"HCD"	"MS2"	"45.3474"	"22.9"	"100.000"	"100.9368"	"35973"	"35973"	"35953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"20.3"	""	"22.3"	""	"53.1"	""	"50.5"	"50.6"	""	"905"	"73"	"36.000"	"29.000"	"2.1959304632336E-06"	"29"	"0"	"2.079E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"817.47400"	"1633.94072"	"1633.94127"	"-0.34"	"-0.00028"	"10/94"	"10"	"94"	"486910.403869629"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"101.1062"	"36013"	"36013"	"35996"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"34.1"	""	"43.0"	""	"91.2"	"1.1"	"100.5"	"99.2"	""	"929"	"80"	"36.000"	"29.000"	"5.0580802835338E-07"	""	"0"	"4.442E-08"	"1.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"545.31854"	"1633.94107"	"1633.94127"	"-0.12"	"-0.00007"	"8/94"	"8"	"94"	"1966269.70898438"	"HCD"	"MS2"	"24.8117"	"48.6"	"100.000"	"101.0362"	"36012"	"36012"	"36002"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.1"	""	"35.7"	""	"38.1"	""	"97.3"	"1.7"	"151.7"	"101.0"	""	"924"	"50"	"36.000"	"29.000"	"0.000514804074519379"	"27"	"0"	"1.515E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7619"	"0.0000"	"1"	"1"	"1"	"545.31866"	"1633.94144"	"1633.94127"	"0.10"	"0.00006"	"7/94"	"7"	"94"	"442417.550598145"	"HCD"	"MS2"	"9.415933"	"17.5"	"100.000"	"101.2171"	"36058"	"36058"	"36040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.1"	""	"18.1"	""	"20.5"	""	"29.5"	""	"35.9"	"36.4"	""	"924"	"42"	"36.000"	"29.000"	"0.00274562977280395"	"25"	"0"	"4.554E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7736"	"0.0000"	"1"	"1"	"1"	"545.31866"	"1633.94144"	"1633.94127"	"0.10"	"0.00006"	"8/94"	"8"	"94"	"1943133.57214355"	"HCD"	"MS2"	"40.82875"	"53.3"	"100.000"	"100.9147"	"35936"	"35936"	"35915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"45.8"	""	"46.9"	""	"107.0"	""	"146.9"	"122.4"	""	"924"	"53"	"36.000"	"29.000"	"0.000251560225613199"	"28"	"0"	"8.072E-06"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7792"	"0.0000"	"1"	"1"	"1"	"817.47449"	"1633.94170"	"1633.94127"	"0.26"	"0.00021"	"10/94"	"10"	"94"	"683730.876403809"	"HCD"	"MS2"	"0"	"54.3"	"100.000"	"101.2120"	"36083"	"36083"	"36071"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.7"	""	"39.1"	""	"42.1"	""	"134.9"	""	"124.2"	"131.1"	""	"924"	"77"	"36.000"	"29.000"	"8.50436664678658E-07"	""	"0"	"1.736E-08"	"1.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLDASEEAIK"	"[K].sLLDASEEAIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"545.31915"	"1633.94291"	"1633.94127"	"1.00"	"0.00054"	"8/94"	"8"	"94"	"421629.077148438"	"HCD"	"MS2"	"12.44905"	"17.9"	"100.000"	"101.3528"	"36139"	"36139"	"36120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"22.1"	""	"16.3"	""	"32.4"	""	"40.6"	"38.8"	""	"928"	"43"	"36.000"	"29.000"	"0.00246330382123178"	"25"	"0"	"7.593E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEDLTEEWLR"	"[R].nTEDLTEEWLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"Q63228"	"Glia maturation factor beta OS=Rattus norvegicus OX=10116 GN=Gmfb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"817.91425"	"1634.82121"	"1634.82233"	"-0.68"	"-0.00056"	"7/112"	"7"	"112"	"338932.124328613"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"103.2738"	"36887"	"36887"	"36867"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"23.1"	""	"20.6"	""	"47.2"	""	"42.5"	"40.5"	""	"764"	"54"	"35.000"	"28.000"	"0.000169068758242523"	"25"	"0"	"8.895E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTPFETPDQGK"	"[K].gTPFETPDQGk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6QI25"	"ORM1-like protein 3 OS=Rattus norvegicus OX=10116 GN=Ormdl3 PE=2 SV=2"	"Q6QI25"	"ORM1-like protein 3 OS=Rattus norvegicus OX=10116 GN=Ormdl3 PE=2 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"817.94312"	"1634.87895"	"1634.87901"	"-0.03"	"-0.00003"	"6/96"	"6"	"96"	"95789.2797851563"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"59.4582"	"19196"	"19196"	"19176"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"11.1"	""	"9.1"	""	"11.2"	""	"13.9"	"15.1"	""	"1071"	"8"	"37.000"	"30.000"	"8.44810834924001"	"14"	"0.00981"	"0.1313"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFDNDGKPR"	"[K].eVFDNDGkPR.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"545.63464"	"1634.88938"	"1634.89024"	"-0.53"	"-0.00029"	"6/92"	"6"	"92"	"4968916.79980469"	"HCD"	"MS2"	"51.65724"	"215.8"	"100.000"	"43.1895"	"12555"	"12555"	"12530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"345.3"	""	"235.3"	""	"267.6"	""	"375.4"	""	"410.0"	"413.1"	""	"1072"	"18"	"37.000"	"30.000"	"0.839778573577967"	"16"	"0"	"0.0002229"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVFDNDGKPR"	"[K].eVFDNDGkPR.[V]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"P63329"	"Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp3ca PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"545.63483"	"1634.88993"	"1634.89024"	"-0.19"	"-0.00010"	"5/92"	"5"	"92"	"4586542.14886475"	"HCD"	"MS2"	"54.93256"	"206.4"	"100.000"	"43.0445"	"12530"	"12530"	"12507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"308.1"	""	"242.3"	""	"239.1"	""	"351.5"	"0.6"	"422.1"	"394.4"	""	"1069"	"15"	"37.000"	"30.000"	"1.79039027229859"	"14"	"9.9E-05"	"0.0006211"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"818.41394"	"1635.82060"	"1635.82095"	"-0.21"	"-0.00017"	"6/118"	"6"	"118"	"259445.645324707"	"HCD"	"MS2"	"100"	"17.0"	"100.000"	"66.4063"	"21982"	"21982"	"21966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.6"	""	"15.0"	""	"16.4"	""	"43.6"	""	"33.4"	"29.9"	""	"802"	"22"	"36.000"	"29.000"	"0.246118564071082"	"28"	"0.0001686"	"0.001608"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"818.41425"	"1635.82121"	"1635.82095"	"0.16"	"0.00013"	"7/118"	"7"	"118"	"261468.944091797"	"HCD"	"MS2"	"100"	"16.3"	"100.000"	"66.4258"	"22023"	"22023"	"22004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"16.0"	""	"18.2"	""	"39.2"	""	"28.6"	"34.3"	""	"808"	"23"	"36.000"	"29.000"	"0.221503893828025"	"17"	"9.9E-05"	"0.0004047"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDVLENQAMDTR"	"[R].vDVLENQAmDTR.[L]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.41675"	"1635.82622"	"1635.82095"	"3.22"	"0.00263"	"6/118"	"6"	"118"	"379766.659606934"	"HCD"	"MS2"	"48.34704"	"25.9"	"100.000"	"66.7077"	"22134"	"22134"	"22121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"17.6"	""	"23.0"	""	"95.0"	""	"39.9"	"51.7"	""	"849"	"5"	"36.000"	"29.000"	"13.6106132825257"	"13"	"0.0001991"	"0.004275"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAMPFTASPAPGTR"	"[R].sAmPFTASPAPGTR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.42108"	"1635.83489"	"1635.83621"	"-0.81"	"-0.00066"	"10/128"	"10"	"128"	"487120.911132813"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"46.4878"	"13896"	"13896"	"13878"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"27.3"	""	"31.4"	""	"47.6"	""	"31.7"	"25.7"	""	"863"	"42"	"36.000"	"29.000"	"0.00287727120915678"	"15"	"0.0001991"	"0.004543"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAMPFTASPAPGTR"	"[R].sAmPFTASPAPGTR.[V]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"P52944"	"PDZ and LIM domain protein 1 OS=Rattus norvegicus OX=10116 GN=Pdlim1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.42188"	"1635.83647"	"1635.83621"	"0.16"	"0.00013"	"11/128"	"11"	"128"	"380304.385742188"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"46.2059"	"13817"	"13817"	"13801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"23.5"	""	"23.2"	""	"42.3"	""	"27.1"	"18.7"	""	"868"	"50"	"36.000"	"29.000"	"0.000485836041424744"	"16"	"0"	"0.0003109"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGGYSVFAGVGER"	"[K].aHGGYSVFAGVGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.95258"	"1635.84317"	"1635.84407"	"-0.55"	"-0.00030"	"10/118"	"10"	"118"	"3281756.32476807"	"HCD"	"MS2"	"16.2637"	"57.2"	"100.000"	"52.6411"	"16425"	"16425"	"16404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.7"	""	"79.7"	""	"88.2"	""	"90.4"	""	"102.4"	"109.8"	""	"890"	"55"	"36.000"	"29.000"	"0.000157166510557421"	"16"	"0"	"1.264E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHGGYSVFAGVGER"	"[K].aHGGYSVFAGVGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.95270"	"1635.84354"	"1635.84407"	"-0.32"	"-0.00018"	"14/118"	"14"	"118"	"3076164.89111328"	"HCD"	"MS2"	"16.23083"	"52.4"	"100.000"	"52.9793"	"16529"	"16529"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.7"	""	"65.8"	""	"75.1"	""	"82.7"	""	"98.2"	"107.3"	""	"923"	"40"	"36.000"	"29.000"	"0.0044892284377307"	"15"	"0"	"4.84E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQVDSPYDISR"	"[K].nIQVDSPYDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"818.43073"	"1635.85417"	"1635.85397"	"0.13"	"0.00010"	"8/122"	"8"	"122"	"221202.773803711"	"HCD"	"MS2"	"9.798194"	"12.1"	"100.000"	"82.3282"	"28467"	"28467"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.7"	""	"14.7"	""	"16.6"	""	"21.8"	""	"26.2"	"21.5"	""	"975"	"35"	"36.000"	"29.000"	"0.0160684734686511"	"21"	"0.0001686"	"0.001112"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQVDSPYDISR"	"[K].nIQVDSPYDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"818.43127"	"1635.85527"	"1635.85397"	"0.80"	"0.00065"	"7/122"	"7"	"122"	"412284.468261719"	"HCD"	"MS2"	"17.35076"	"22.6"	"100.000"	"82.0074"	"28336"	"28336"	"28318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"29.0"	""	"25.6"	""	"38.9"	"0.9"	"44.8"	"45.6"	""	"970"	"41"	"36.000"	"29.000"	"0.00350543354747053"	"21"	"0"	"6.765E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIQVDSPYDISR"	"[K].nIQVDSPYDISR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"818.43134"	"1635.85539"	"1635.85397"	"0.87"	"0.00071"	"10/122"	"10"	"122"	"180273.79901123"	"HCD"	"MS2"	"10.53007"	"10.6"	"100.000"	"82.2914"	"28424"	"28424"	"28400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"12.7"	""	"13.7"	""	"15.1"	""	"26.8"	"21.6"	""	"970"	"27"	"36.000"	"29.000"	"0.101564454108768"	"16"	"0.0001991"	"0.004978"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPHK"	"[K].dFYELEPHk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.96381"	"1635.87687"	"1635.87828"	"-0.86"	"-0.00047"	"5/74"	"5"	"74"	"630382.294433594"	"HCD"	"MS2"	"21.59858"	"24.7"	"100.000"	"81.7259"	"28222"	"28222"	"28200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"22.5"	""	"30.1"	""	"34.2"	"2.5"	"43.9"	"64.3"	""	"1065"	"28"	"37.000"	"30.000"	"0.0804117682092409"	"14"	"0.0001686"	"0.001149"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDEWGIFPK"	"[K].eGDEWGIFPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"818.44214"	"1635.87700"	"1635.87828"	"-0.78"	"-0.00064"	"7/78"	"7"	"78"	"279290.418395996"	"HCD"	"MS2"	"45.30113"	"23.3"	"100.000"	"110.0965"	"39559"	"39559"	"39540"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"24.6"	""	"31.3"	""	"42.3"	""	"45.7"	"50.0"	""	"1066"	"32"	"37.000"	"30.000"	"0.0377335103076745"	"17"	"0.0001991"	"0.004762"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPHK"	"[K].dFYELEPHk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"545.96387"	"1635.87705"	"1635.87828"	"-0.75"	"-0.00041"	"9/74"	"9"	"74"	"1595612.25354004"	"HCD"	"MS2"	"7.607765"	"45.0"	"100.000"	"81.3964"	"28061"	"28061"	"28042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.0"	""	"40.3"	""	"41.3"	""	"49.5"	""	"52.9"	"171.0"	""	"1066"	"32"	"37.000"	"30.000"	"0.0327135148752835"	"20"	"9.9E-05"	"0.0004749"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPHK"	"[K].dFYELEPHk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"545.96393"	"1635.87723"	"1635.87828"	"-0.64"	"-0.00035"	"9/74"	"9"	"74"	"1168231.33459473"	"HCD"	"MS2"	"20.39635"	"33.4"	"100.000"	"81.1357"	"27982"	"27982"	"27967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.9"	""	"34.8"	""	"37.1"	""	"35.6"	"0.6"	"53.0"	"106.6"	""	"1061"	"28"	"37.000"	"30.000"	"0.083499790959933"	"17"	"0.0001686"	"0.00152"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPHK"	"[K].dFYELEPHk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.96411"	"1635.87778"	"1635.87828"	"-0.30"	"-0.00017"	"9/74"	"9"	"74"	"1724059.36517334"	"HCD"	"MS2"	"10.77245"	"44.9"	"100.000"	"81.4170"	"28096"	"28096"	"28080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.2"	""	"35.5"	""	"49.1"	""	"41.4"	""	"52.0"	"181.4"	""	"1059"	"31"	"37.000"	"30.000"	"0.0439405981398887"	"14"	"9.9E-05"	"0.0006515"	"0.486"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFYELEPHK"	"[K].dFYELEPHk.[F]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"P09812"	"Glycogen phosphorylase, muscle form OS=Rattus norvegicus OX=10116 GN=Pygm PE=1 SV=5"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"545.96436"	"1635.87851"	"1635.87828"	"0.14"	"0.00008"	"7/74"	"7"	"74"	"1450801.93554688"	"HCD"	"MS2"	"20.53446"	"40.2"	"100.000"	"81.1083"	"27944"	"27944"	"27923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.9"	""	"44.5"	""	"47.4"	""	"41.3"	"0.5"	"60.7"	"129.1"	""	"1065"	"32"	"37.000"	"30.000"	"0.0337535621244314"	"19"	"0.0001686"	"0.001122"	"0.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDEWGIFPK"	"[K].eGDEWGIFPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"545.96442"	"1635.87870"	"1635.87828"	"0.25"	"0.00014"	"10/78"	"10"	"78"	"351126.773376465"	"HCD"	"MS2"	"20.84672"	"12.1"	"100.000"	"109.8002"	"39428"	"39428"	"39406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"14.1"	""	"13.2"	""	"19.3"	""	"27.5"	"26.5"	""	"1064"	"21"	"37.000"	"30.000"	"0.436427021583464"	"20"	"0.002035"	"0.01763"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDEWGIFPK"	"[K].eGDEWGIFPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"545.96454"	"1635.87906"	"1635.87828"	"0.48"	"0.00026"	"6/78"	"6"	"78"	"383231.157653809"	"HCD"	"MS2"	"5.762494"	"13.3"	"100.000"	"109.9878"	"39515"	"39515"	"39497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"14.4"	""	"16.1"	""	"20.3"	""	"28.9"	"30.8"	""	"1049"	"25"	"37.000"	"30.000"	"0.182282716676961"	"21"	"0.0001991"	"0.004554"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDEWGIFPK"	"[K].eGDEWGIFPk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"818.44318"	"1635.87908"	"1635.87828"	"0.49"	"0.00040"	"7/78"	"7"	"78"	"243434.882385254"	"HCD"	"MS2"	"40.52027"	"20.4"	"100.000"	"109.9138"	"39473"	"39473"	"39459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"20.1"	""	"27.6"	""	"35.4"	""	"44.7"	"43.8"	""	"1049"	"36"	"37.000"	"30.000"	"0.0128157932488799"	"20"	"0.0001991"	"0.003157"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEQGAYLGPLPYK"	"[K].AEQGAYLGPLPYk.[G]"	"K13(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"818.45081"	"1635.89433"	"1635.89437"	"-0.02"	"-0.00002"	"4/116"	"4"	"116"	"138274.778808594"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"91.5361"	"32140"	"32140"	"32116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.8"	""	"16.1"	""	"15.5"	""	"19.5"	""	"21.0"	"15.5"	""	"1065"	"15"	"37.000"	"30.000"	"1.78780279584373"	"19"	"0.006157"	"0.07518"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNPDLGTAFVK"	"[R].dnPDLGTAFVk.[F]"	"N-Term(TMT6plex); N2(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"Q1AAU6"	"Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Asap1 PE=1 SV=2"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"545.97113"	"1635.89884"	"1635.89941"	"-0.35"	"-0.00019"	"5/110"	"5"	"110"	"316180.107971191"	"HCD"	"MS2"	"22.02267"	"11.3"	"100.000"	"105.0659"	"37622"	"37622"	"37602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.4"	""	"11.8"	""	"15.3"	""	"15.8"	""	"22.8"	"23.8"	""	"1049"	"10"	"37.000"	"30.000"	"5.14926796113982"	"22"	"0.007717"	"0.09815"	"0.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEMSQDIIK"	"[R].vDEMSQDIIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"818.45404"	"1635.90080"	"1635.90278"	"-1.21"	"-0.00099"	"7/90"	"7"	"90"	"107073.336242676"	"HCD"	"MS2"	"31.32676"	"12.3"	"100.000"	"95.0443"	"33558"	"33558"	"33530"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"14.7"	""	"13.3"	""	"16.2"	""	"30.0"	"26.6"	""	"1065"	"12"	"37.000"	"30.000"	"3.00828939087551"	"21"	"0.003984"	"0.04361"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDEMSQDIIK"	"[R].vDEMSQDIIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"Q6P9U8"	"Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus OX=10116 GN=Eif3h PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"818.45447"	"1635.90166"	"1635.90278"	"-0.68"	"-0.00056"	"5/90"	"5"	"90"	"140873.376831055"	"HCD"	"MS2"	"28.38659"	"13.3"	"100.000"	"95.0808"	"33606"	"33606"	"33576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.1"	""	"18.2"	""	"14.2"	""	"23.0"	""	"28.3"	"23.9"	""	"1055"	"13"	"37.000"	"30.000"	"2.4000620172915"	"18"	"0.001951"	"0.01663"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGDDMEISVK"	"[K].lAGDDMEISVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"818.45520"	"1635.90312"	"1635.90278"	"0.21"	"0.00017"	"9/90"	"9"	"90"	"138678.162109375"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"97.5646"	"34609"	"34609"	"34584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"17.6"	""	"16.9"	""	"14.1"	""	"25.4"	"23.4"	""	"1036"	"18"	"37.000"	"30.000"	"0.826665398268628"	"20"	"0.002525"	"0.02409"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGDDMEISVK"	"[K].lAGDDMEISVk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"818.45605"	"1635.90483"	"1635.90278"	"1.26"	"0.00103"	"8/90"	"8"	"90"	"127035.931640625"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"97.5341"	"34566"	"34566"	"34537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"17.3"	""	"18.5"	""	"17.4"	""	"21.2"	"20.8"	""	"1037"	"16"	"37.000"	"30.000"	"1.21268710824488"	"14"	"0.007989"	"0.101"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAHKSEIAHR"	"[R].eAHkSEIAHR.[F]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.98212"	"1635.93180"	"1635.93311"	"-0.80"	"-0.00044"	"9/94"	"9"	"94"	"404993.711975098"	"HCD"	"MS2"	"29.17491"	"28.2"	"100.000"	"19.1439"	"2963"	"2963"	"2946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.5"	""	"41.9"	""	"45.4"	""	"33.9"	""	"34.7"	"29.6"	""	"946"	"3"	"36.000"	"29.000"	"22.0222222236359"	"13"	"0.006845"	"0.08589"	"0.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAHKSEIAHR"	"[R].eAHkSEIAHR.[F]"	"N-Term(TMT6plex); K4(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"545.98248"	"1635.93290"	"1635.93311"	"-0.13"	"-0.00007"	"5/94"	"5"	"94"	"500344.308410645"	"HCD"	"MS2"	"0"	"36.3"	"100.000"	"19.0988"	"2985"	"2985"	"2968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.3"	""	"57.3"	""	"54.0"	""	"47.0"	""	"49.9"	"34.2"	""	"932"	"2"	"36.000"	"29.000"	"27.8859803298109"	"13"	"0.009207"	"0.1179"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HENIIGINDIIR"	"[R].hENIIGINDIIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"545.98364"	"1635.93637"	"1635.93797"	"-0.98"	"-0.00053"	"9/120"	"9"	"120"	"824263.195556641"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"92.6006"	"32608"	"32608"	"32588"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"14.9"	""	"12.1"	""	"20.0"	""	"24.0"	"19.6"	""	"887"	"30"	"36.000"	"29.000"	"0.0406343787369107"	"16"	"0"	"3.84E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HENIIGINDIIR"	"[R].hENIIGINDIIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"545.98376"	"1635.93674"	"1635.93797"	"-0.75"	"-0.00041"	"11/120"	"11"	"120"	"414609.841125488"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"92.9011"	"32689"	"32689"	"32669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"9.2"	""	"9.2"	""	"15.6"	""	"16.5"	"12.6"	""	"888"	"44"	"36.000"	"29.000"	"0.00163449264297284"	"21"	"0"	"6.176E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HENIIGINDIIR"	"[R].hENIIGINDIIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"P63086"	"Mitogen-activated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Mapk1 PE=1 SV=3"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"545.98401"	"1635.93747"	"1635.93797"	"-0.30"	"-0.00017"	"11/120"	"11"	"120"	"579296.74230957"	"HCD"	"MS2"	"10.01692"	"9.0"	"100.000"	"92.5784"	"32564"	"32564"	"32536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"13.8"	""	"9.7"	""	"17.3"	""	"17.5"	"19.7"	""	"882"	"32"	"36.000"	"29.000"	"0.0280180940946619"	"17"	"0"	"0.0001579"	"0.613"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITALAPSTMK"	"[K].eITALAPSTmk.[I]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"545.98456"	"1635.93912"	"1635.93917"	"-0.03"	"-0.00001"	"10/96"	"10"	"96"	"793472.745849609"	"HCD"	"MS2"	"41.89129"	"26.0"	"100.000"	"75.9383"	"25880"	"25880"	"25849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"32.9"	""	"28.5"	""	"53.0"	""	"56.3"	"48.9"	""	"864"	"24"	"36.000"	"29.000"	"0.154341866081633"	"19"	"9.9E-05"	"0.0004381"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELEEDFIR"	"[R].kELEEDFIR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"1"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"546.31458"	"1636.92917"	"1636.93104"	"-1.14"	"-0.00062"	"7/88"	"7"	"88"	"1959889.40228271"	"HCD"	"MS2"	"28.75956"	"91.4"	"100.000"	"76.3664"	"26022"	"26022"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.3"	""	"102.0"	""	"126.5"	""	"161.4"	"1.6"	"157.4"	"155.8"	""	"974"	"15"	"36.000"	"29.000"	"1.58317513826707"	"25"	"0.0005161"	"0.006817"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELEEDFIR"	"[R].kELEEDFIR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.31512"	"1636.93082"	"1636.93104"	"-0.14"	"-0.00007"	"11/88"	"11"	"88"	"1609316.40527344"	"HCD"	"MS2"	"17.85798"	"67.0"	"100.000"	"76.6637"	"26143"	"26143"	"26120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.1"	""	"74.7"	""	"86.8"	""	"108.7"	"0.3"	"123.6"	"117.2"	""	"940"	"9"	"36.000"	"29.000"	"5.47139233822931"	"13"	"0.001615"	"0.01309"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KELEEDFIR"	"[R].kELEEDFIR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"B0BNA5"	"Coactosin-like protein OS=Rattus norvegicus OX=10116 GN=Cotl1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.31519"	"1636.93100"	"1636.93104"	"-0.02"	"-0.00001"	"7/88"	"7"	"88"	"2446000.79986572"	"HCD"	"MS2"	"15.05659"	"101.9"	"100.000"	"76.5036"	"26109"	"26109"	"26090"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.3"	""	"133.9"	""	"133.4"	""	"158.4"	""	"179.1"	"169.4"	""	"940"	"14"	"36.000"	"29.000"	"1.93685833975745"	"13"	"0.0001991"	"0.005599"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"819.42218"	"1637.83708"	"1637.83725"	"-0.10"	"-0.00008"	"8/98"	"8"	"98"	"406972.143676758"	"HCD"	"MS2"	"6.402559"	"17.6"	"100.000"	"93.8679"	"33115"	"33115"	"33094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"24.8"	""	"24.8"	""	"25.2"	""	"31.8"	"29.8"	""	"942"	"54"	"36.000"	"29.000"	"0.000177427489321421"	"19"	"0"	"2.13E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"819.42224"	"1637.83721"	"1637.83725"	"-0.03"	"-0.00002"	"14/98"	"14"	"98"	"291413.836486816"	"HCD"	"MS2"	"3.07773"	"12.7"	"100.000"	"94.2446"	"33233"	"33233"	"33211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"16.2"	""	"19.1"	""	"20.9"	""	"21.2"	"27.7"	""	"942"	"54"	"36.000"	"29.000"	"0.000203245485185877"	"19"	"0"	"1.257E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8814"	"0.0000"	"1"	"1"	"1"	"819.42236"	"1637.83745"	"1637.83725"	"0.12"	"0.00010"	"7/98"	"7"	"98"	"282636.330993652"	"HCD"	"MS2"	"3.336819"	"13.1"	"100.000"	"94.1658"	"33236"	"33236"	"33220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"18.9"	""	"20.1"	""	"18.9"	""	"23.3"	"22.7"	""	"942"	"59"	"36.000"	"29.000"	"5.45784134749064E-05"	"23"	"0"	"3.522E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFDETYPDPVR"	"[R].aVFDETYPDPVR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"P50475"	"Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Aars PE=1 SV=3"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"819.42279"	"1637.83830"	"1637.83725"	"0.64"	"0.00053"	"8/98"	"8"	"98"	"428225.721923828"	"HCD"	"MS2"	"6.427835"	"20.5"	"100.000"	"93.9236"	"33102"	"33102"	"33083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.9"	""	"31.8"	""	"30.4"	""	"25.5"	""	"35.7"	"34.9"	""	"944"	"48"	"36.000"	"29.000"	"0.000749794065338151"	"22"	"0"	"0.0001321"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLLDANEEFK"	"[R].tLLDANEEFk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q8VHI8"	"Vesicle transport protein SEC20 OS=Rattus norvegicus OX=10116 GN=Bnip1 PE=2 SV=1"	"Q8VHI8"	"Vesicle transport protein SEC20 OS=Rattus norvegicus OX=10116 GN=Bnip1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.46204"	"1637.91680"	"1637.91506"	"1.06"	"0.00087"	"6/94"	"6"	"94"	"111494.025512695"	"HCD"	"MS2"	"33.3073"	"7.4"	"100.000"	"98.2200"	"34874"	"34874"	"34856"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"6.5"	""	"7.9"	""	"13.2"	""	"15.3"	"17.6"	""	"986"	"9"	"36.000"	"29.000"	"5.54430252165695"	"13"	"0.00511"	"0.06573"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQIEVETHK"	"[K].vPQIEVETHk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.65900"	"1637.96244"	"1637.96268"	"-0.15"	"-0.00008"	"5/92"	"5"	"92"	"2157324.3449707"	"HCD"	"MS2"	"33.72199"	"64.4"	"100.000"	"64.6216"	"21255"	"21255"	"21231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.8"	""	"81.3"	""	"87.3"	""	"98.9"	""	"131.6"	"141.3"	""	"650"	"17"	"35.000"	"28.000"	"0.648460252364886"	"14"	"0"	"0.0001737"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPQIEVETHK"	"[K].vPQIEVETHk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"546.65906"	"1637.96262"	"1637.96268"	"-0.04"	"-0.00002"	"7/92"	"7"	"92"	"2475620.17340088"	"HCD"	"MS2"	"47.31198"	"65.4"	"100.000"	"64.6801"	"21313"	"21313"	"21291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.2"	""	"77.2"	""	"90.6"	""	"95.3"	""	"130.5"	"136.6"	""	"650"	"44"	"35.000"	"28.000"	"0.00134240438146802"	"15"	"0"	"2.205E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.94897"	"1638.89067"	"1638.89255"	"-1.15"	"-0.00094"	"12/94"	"12"	"94"	"235890.465881348"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"59.2882"	"19092"	"19092"	"19070"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"14.2"	""	"19.7"	""	"48.1"	""	"29.9"	"35.3"	""	"1028"	"28"	"37.000"	"30.000"	"0.0807166481427446"	"14"	"0.0001991"	"0.003993"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"546.96863"	"1638.89133"	"1638.89255"	"-0.74"	"-0.00041"	"9/94"	"9"	"94"	"4808121.68060303"	"HCD"	"MS2"	"1.405461"	"141.7"	"100.000"	"58.8646"	"18919"	"18919"	"18901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"140.7"	""	"137.2"	""	"178.4"	""	"369.9"	""	"278.8"	"240.0"	""	"1024"	"33"	"37.000"	"30.000"	"0.0276229438727745"	"22"	"0.0001991"	"0.002697"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"546.96881"	"1638.89188"	"1638.89255"	"-0.41"	"-0.00022"	"9/94"	"9"	"94"	"3765887.42169189"	"HCD"	"MS2"	"20.92265"	"115.8"	"100.000"	"58.9039"	"18971"	"18971"	"18957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.2"	""	"123.2"	""	"153.5"	""	"284.6"	""	"219.6"	"200.9"	""	"1021"	"31"	"37.000"	"30.000"	"0.0431514850454328"	"18"	"9.9E-05"	"0.001015"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"546.96881"	"1638.89188"	"1638.89255"	"-0.41"	"-0.00022"	"9/94"	"9"	"94"	"4852157.36260986"	"HCD"	"MS2"	"1.430369"	"144.8"	"100.000"	"58.6207"	"18856"	"18856"	"18839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.6"	""	"164.6"	""	"170.3"	""	"374.6"	"1.0"	"284.6"	"245.0"	""	"1021"	"27"	"37.000"	"30.000"	"0.101858141179161"	"17"	"0.0001991"	"0.004974"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"819.94958"	"1638.89189"	"1638.89255"	"-0.40"	"-0.00033"	"13/94"	"13"	"94"	"254571.693237305"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"59.0582"	"19033"	"19033"	"19014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.1"	""	"14.8"	""	"25.7"	""	"48.1"	""	"37.3"	"33.5"	""	"1021"	"34"	"37.000"	"30.000"	"0.0190983455312883"	"18"	"0.0001991"	"0.003037"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"819.94958"	"1638.89189"	"1638.89255"	"-0.40"	"-0.00033"	"16/94"	"16"	"94"	"1620357.12530518"	"HCD"	"MS2"	"1.636774"	"101.8"	"100.000"	"58.9869"	"18969"	"18969"	"18949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.8"	""	"99.4"	""	"116.0"	""	"330.8"	"2.1"	"170.2"	"161.4"	""	"1021"	"55"	"37.000"	"30.000"	"0.000179471604889696"	"19"	"0"	"0.000228"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"819.94977"	"1638.89226"	"1638.89255"	"-0.18"	"-0.00014"	"16/94"	"16"	"94"	"1446646.21380615"	"HCD"	"MS2"	"0"	"90.4"	"100.000"	"58.7474"	"18907"	"18907"	"18887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.1"	""	"89.2"	""	"107.3"	""	"275.6"	""	"158.5"	"148.2"	""	"1023"	"55"	"37.000"	"30.000"	"0.000173718326929994"	"21"	"9.9E-05"	"0.0006089"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"819.94995"	"1638.89263"	"1638.89255"	"0.05"	"0.00004"	"9/94"	"9"	"94"	"324635.766906738"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"58.4248"	"18776"	"18776"	"18747"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"21.3"	""	"21.4"	""	"78.9"	""	"41.0"	"34.7"	""	"1010"	"39"	"37.000"	"30.000"	"0.00585182564858339"	"17"	"0.0001686"	"0.001672"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"819.95038"	"1638.89348"	"1638.89255"	"0.57"	"0.00047"	"13/94"	"13"	"94"	"361746.791870117"	"HCD"	"MS2"	"0"	"26.0"	"100.000"	"58.6920"	"18849"	"18849"	"18826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.6"	""	"24.6"	""	"27.0"	""	"89.7"	"0.9"	"37.5"	"42.5"	""	"1018"	"42"	"37.000"	"30.000"	"0.00323383444312538"	"15"	"0.0001686"	"0.001943"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATAVMPDGQFK"	"[K].aTAVmPDGQFk.[D]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"Q63716"	"Peroxiredoxin-1 OS=Rattus norvegicus OX=10116 GN=Prdx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"546.96948"	"1638.89389"	"1638.89255"	"0.82"	"0.00045"	"9/94"	"9"	"94"	"3403543.8392334"	"HCD"	"MS2"	"20.59194"	"115.9"	"100.000"	"59.1571"	"19039"	"19039"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.4"	""	"110.4"	""	"154.7"	""	"284.3"	""	"212.7"	"212.5"	""	"1023"	"28"	"37.000"	"30.000"	"0.0841096136424437"	"17"	"0.0001991"	"0.002984"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAFEEAEK"	"[R].kAFEEAEk.[N]"	"N-Term(TMT6plex); K1(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"546.99390"	"1638.96714"	"1638.96698"	"0.09"	"0.00005"	"11/76"	"11"	"76"	"3209426.65008545"	"HCD"	"MS2"	"60.85096"	"170.1"	"100.000"	"43.5641"	"12743"	"12743"	"12714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"262.9"	""	"203.1"	""	"222.1"	""	"279.1"	"3.7"	"335.1"	"306.5"	""	"598"	"9"	"34.000"	"27.000"	"3.36256887216111"	"15"	"0.001049"	"0.008612"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"820.94745"	"1640.88762"	"1640.88957"	"-1.19"	"-0.00098"	"11/94"	"11"	"94"	"236921.58380127"	"HCD"	"MS2"	"0"	"20.9"	"100.000"	"67.6799"	"22497"	"22497"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"27.8"	""	"29.6"	""	"36.4"	""	"39.4"	"32.3"	""	"894"	"25"	"36.000"	"29.000"	"0.128323892016504"	"18"	"0.002189"	"0.0203"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"3"	"3"	"0.8864"	"0.0000"	"1"	"1"	"1"	"547.63434"	"1640.88846"	"1640.88957"	"-0.68"	"-0.00037"	"13/94"	"13"	"94"	"2502854.63275146"	"HCD"	"MS2"	"26.5538"	"68.1"	"100.000"	"67.8632"	"22602"	"22602"	"22579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.6"	""	"85.3"	""	"100.6"	""	"108.2"	"0.3"	"111.6"	"127.7"	""	"903"	"44"	"36.000"	"29.000"	"0.00168134855373938"	"20"	"0"	"8.46E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"2"	"2"	"0.7656"	"0.0000"	"1"	"1"	"1"	"820.94788"	"1640.88848"	"1640.88957"	"-0.67"	"-0.00055"	"9/94"	"9"	"94"	"820399.531555176"	"HCD"	"MS2"	"0"	"70.2"	"100.000"	"67.9747"	"22615"	"22615"	"22604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.9"	""	"87.4"	""	"100.8"	""	"116.3"	""	"122.5"	"125.6"	""	"903"	"64"	"36.000"	"29.000"	"1.8865041054095E-05"	""	"0"	"1.372E-06"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"547.63446"	"1640.88883"	"1640.88957"	"-0.45"	"-0.00025"	"12/94"	"12"	"94"	"2484562.49420166"	"HCD"	"MS2"	"17.80379"	"71.7"	"100.000"	"67.7974"	"22544"	"22544"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.3"	""	"88.9"	""	"90.4"	""	"114.9"	""	"129.6"	"144.2"	""	"906"	"40"	"36.000"	"29.000"	"0.00489889579937967"	"19"	"0"	"0.0001498"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"3"	"3"	"0.8444"	"0.0000"	"1"	"1"	"1"	"547.63452"	"1640.88901"	"1640.88957"	"-0.34"	"-0.00019"	"13/94"	"13"	"94"	"2658590.309021"	"HCD"	"MS2"	"15.97777"	"70.2"	"100.000"	"68.1881"	"22734"	"22734"	"22714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.5"	""	"84.5"	""	"104.6"	""	"107.1"	""	"130.7"	"126.3"	""	"915"	"45"	"36.000"	"29.000"	"0.00129536183807822"	"22"	"0"	"7.049E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"547.63452"	"1640.88901"	"1640.88957"	"-0.34"	"-0.00019"	"12/94"	"12"	"94"	"2668793.62969971"	"HCD"	"MS2"	"11.86098"	"74.9"	"100.000"	"68.1156"	"22672"	"22672"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.8"	""	"91.6"	""	"103.6"	""	"119.6"	""	"145.5"	"131.6"	""	"915"	"41"	"36.000"	"29.000"	"0.00364242902815923"	"20"	"0"	"0.0001312"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"820.94849"	"1640.88970"	"1640.88957"	"0.08"	"0.00006"	"17/94"	"17"	"94"	"780830.499694824"	"HCD"	"MS2"	"0"	"67.8"	"100.000"	"68.0753"	"22688"	"22688"	"22668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.3"	""	"83.8"	""	"96.7"	""	"104.6"	""	"125.5"	"115.0"	""	"906"	"66"	"36.000"	"29.000"	"1.12485929669889E-05"	""	"0"	"6.233E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"820.94861"	"1640.88994"	"1640.88957"	"0.22"	"0.00018"	"10/94"	"10"	"94"	"190249.78717041"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"68.3227"	"22757"	"22757"	"22732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.7"	""	"17.4"	""	"20.7"	""	"29.3"	""	"26.2"	"31.0"	""	"906"	"29"	"36.000"	"29.000"	"0.0621009440072679"	"20"	"9.9E-05"	"0.0009054"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLSEVASGDNK"	"[R].yLSEVASGDNk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"P35213"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3"	"0"	"2"	"2"	"0.7414"	"0.0000"	"1"	"1"	"1"	"820.94897"	"1640.89067"	"1640.88957"	"0.67"	"0.00055"	"16/94"	"16"	"94"	"297882.475219727"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"67.7548"	"22558"	"22558"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.2"	""	"22.6"	""	"36.2"	""	"45.5"	""	"48.2"	"39.9"	""	"909"	"58"	"36.000"	"29.000"	"8.04514521555266E-05"	""	"0"	"1.522E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"547.63708"	"1640.89670"	"1640.89914"	"-1.49"	"-0.00081"	"6/114"	"6"	"114"	"375852.46484375"	"HCD"	"MS2"	"14.94473"	"17.4"	"100.000"	"78.1673"	"26775"	"26775"	"26751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.5"	""	"23.8"	""	"28.2"	""	"30.0"	""	"30.2"	"31.1"	""	"920"	"1"	"36.000"	"29.000"	"37.0474082951571"	"13"	"0.004213"	"0.04558"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"547.63739"	"1640.89762"	"1640.89914"	"-0.93"	"-0.00051"	"9/114"	"9"	"114"	"1363866.53210449"	"HCD"	"MS2"	"3.927108"	"35.3"	"100.000"	"80.3195"	"27651"	"27651"	"27636"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.3"	""	"50.5"	""	"52.3"	""	"44.2"	"0.2"	"59.8"	"62.3"	""	"894"	"27"	"36.000"	"29.000"	"0.092110157123169"	"24"	"0"	"0.0001647"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"547.63751"	"1640.89798"	"1640.89914"	"-0.71"	"-0.00039"	"10/114"	"10"	"114"	"419336.44543457"	"HCD"	"MS2"	"24.62347"	"17.2"	"100.000"	"80.5316"	"27710"	"27710"	"27689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.4"	""	"23.9"	""	"26.1"	""	"23.7"	""	"33.4"	"34.6"	""	"898"	"14"	"36.000"	"29.000"	"1.70312428253183"	"13"	"0.0001991"	"0.002912"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"547.63751"	"1640.89798"	"1640.89914"	"-0.71"	"-0.00039"	"9/114"	"9"	"114"	"880214.688903809"	"HCD"	"MS2"	"19.73616"	"24.5"	"100.000"	"79.9011"	"27454"	"27454"	"27431"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.3"	""	"34.1"	""	"38.0"	""	"35.6"	""	"43.1"	"38.5"	""	"898"	"25"	"36.000"	"29.000"	"0.159311211765875"	"25"	"0"	"0.0001913"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.6296"	"0.0000"	"1"	"1"	"1"	"547.63757"	"1640.89817"	"1640.89914"	"-0.59"	"-0.00033"	"9/114"	"9"	"114"	"1115711.80773926"	"HCD"	"MS2"	"14.86958"	"29.5"	"100.000"	"80.0271"	"27533"	"27533"	"27509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.3"	""	"40.6"	""	"47.9"	""	"38.9"	"0.6"	"49.0"	"48.6"	""	"893"	"27"	"36.000"	"29.000"	"0.0818128389588745"	"24"	"0"	"0.0001536"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNGRPLEMIEPR"	"[K].vnGRPLEMIEPR.[T]"	"N-Term(TMT6plex); N2(Deamidated)"	"1"	"1"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"P62250"	"40S ribosomal protein S16 OS=Rattus norvegicus OX=10116 GN=Rps16 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"547.63788"	"1640.89908"	"1640.89914"	"-0.04"	"-0.00002"	"9/114"	"9"	"114"	"1426828.78265381"	"HCD"	"MS2"	"10.35371"	"35.1"	"100.000"	"80.2023"	"27577"	"27577"	"27556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"49.9"	""	"52.3"	""	"39.3"	""	"69.9"	"64.9"	""	"896"	"24"	"36.000"	"29.000"	"0.196461752603194"	"22"	"9.9E-05"	"0.0006187"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"820.97296"	"1640.93865"	"1640.94205"	"-2.08"	"-0.00170"	"8/116"	"8"	"116"	"202925.900024414"	"HCD"	"MS2"	"24.96667"	"11.5"	"100.000"	"97.7190"	"34641"	"34641"	"34615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"18.2"	""	"14.9"	""	"17.8"	""	"23.4"	"20.1"	""	"762"	"9"	"35.000"	"28.000"	"4.31444538392747"	"17"	"0.001615"	"0.01314"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"820.97412"	"1640.94097"	"1640.94205"	"-0.66"	"-0.00054"	"4/116"	"4"	"116"	"139857.713439941"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"96.8256"	"34280"	"34280"	"34251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"5.6"	""	"7.9"	""	"12.7"	""	"14.7"	"17.5"	""	"785"	"16"	"35.000"	"28.000"	"0.897097530324857"	"19"	"0.0001991"	"0.004059"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.4483"	"0.0000"	"1"	"1"	"1"	"820.97455"	"1640.94182"	"1640.94205"	"-0.14"	"-0.00012"	"5/116"	"5"	"116"	"127303.153015137"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"96.9044"	"34342"	"34342"	"34326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"11.2"	""	"11.8"	""	"15.4"	""	"12.2"	"14.0"	""	"775"	"29"	"35.000"	"28.000"	"0.0459485389914774"	""	"0"	"0.0002782"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8382"	"0.0000"	"1"	"1"	"1"	"820.97473"	"1640.94219"	"1640.94205"	"0.08"	"0.00007"	"12/116"	"12"	"116"	"1297632.94415283"	"HCD"	"MS2"	"0"	"53.9"	"100.000"	"97.1075"	"34394"	"34394"	"34377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.4"	""	"58.3"	""	"68.9"	""	"100.4"	""	"96.9"	"113.6"	""	"775"	"68"	"35.000"	"28.000"	"5.73154500415181E-06"	"28"	"0"	"2.871E-09"	"1.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.8592"	"0.0000"	"1"	"1"	"1"	"820.97491"	"1640.94255"	"1640.94205"	"0.30"	"0.00025"	"11/116"	"11"	"116"	"1417809.35900879"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"97.1932"	"34459"	"34459"	"34445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"84.8"	""	"60.5"	""	"77.1"	""	"93.9"	"0.8"	"111.7"	"119.2"	""	"765"	"71"	"35.000"	"28.000"	"2.72039168972398E-06"	"26"	"0"	"5.948E-09"	"1.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"820.97504"	"1640.94280"	"1640.94205"	"0.45"	"0.00037"	"11/116"	"11"	"116"	"1144530.76867676"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"97.4027"	"34512"	"34512"	"34497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.7"	""	"60.3"	""	"61.9"	""	"76.0"	"0.1"	"98.5"	"109.3"	""	"765"	"65"	"35.000"	"28.000"	"1.25496449615768E-05"	""	"0"	"3.615E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEEGPPVTTVLTR"	"[R].lEEGPPVTTVLTR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"2"	"2"	"0.7971"	"0.0000"	"1"	"1"	"1"	"820.97516"	"1640.94304"	"1640.94205"	"0.60"	"0.00049"	"11/116"	"11"	"116"	"1127196.68566895"	"HCD"	"MS2"	"0"	"47.5"	"100.000"	"97.4813"	"34575"	"34575"	"34557"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.1"	""	"57.9"	""	"61.4"	""	"81.1"	""	"85.6"	"98.7"	""	"773"	"69"	"35.000"	"28.000"	"4.53053508784352E-06"	""	"0"	"1.594E-07"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEYQMSLEPIR"	"[R].fEYQMSLEPIR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.42468"	"1641.84209"	"1641.85079"	"-5.30"	"-0.00435"	"6/106"	"6"	"106"	"158015.20501709"	"HCD"	"MS2"	"42.85302"	"11.8"	"100.000"	"109.8883"	"39463"	"39463"	"39445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"18.2"	""	"17.9"	""	"11.3"	""	"19.3"	"21.6"	""	"773"	"19"	"35.000"	"28.000"	"0.479898616884467"	"14"	"0.001316"	"0.01038"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLMNEDFEK"	"[K].aSLMNEDFEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"821.43091"	"1641.85454"	"1641.85583"	"-0.79"	"-0.00064"	"5/96"	"5"	"96"	"127152.491027832"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"90.2623"	"31626"	"31626"	"31606"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"14.7"	""	"13.2"	""	"14.3"	""	"28.1"	"15.5"	""	"816"	"13"	"36.000"	"29.000"	"2.02143677848354"	"14"	"0.003357"	"0.03779"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAGSVDPTMDK"	"[R].fAGSVDPTmDk.[F]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"P20673"	"Argininosuccinate lyase OS=Rattus norvegicus OX=10116 GN=Asl PE=2 SV=1"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"821.43109"	"1641.85491"	"1641.85583"	"-0.56"	"-0.00046"	"8/92"	"8"	"92"	"150508.773986816"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"69.1428"	"23090"	"23090"	"23062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"10.1"	""	"14.5"	""	"34.4"	"1.5"	"23.0"	"21.0"	""	"814"	"18"	"36.000"	"29.000"	"0.65402508997624"	"19"	"0.001615"	"0.01439"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASLMNEDFEK"	"[K].aSLMNEDFEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"821.43250"	"1641.85771"	"1641.85583"	"1.15"	"0.00094"	"10/96"	"10"	"96"	"155605.717712402"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"90.2243"	"31649"	"31649"	"31625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.9"	""	"20.5"	""	"17.6"	""	"18.8"	""	"28.8"	"31.5"	""	"820"	"32"	"36.000"	"29.000"	"0.0240870634537209"	"20"	"0.000885"	"0.007748"	"0.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"821.43439"	"1641.86150"	"1641.86369"	"-1.34"	"-0.00110"	"7/84"	"7"	"84"	"160783.417785645"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"42.7524"	"12377"	"12377"	"12346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"14.5"	""	"13.8"	""	"29.8"	""	"18.7"	"20.3"	""	"836"	"34"	"36.000"	"29.000"	"0.0182043963200568"	"20"	"0.0001991"	"0.002269"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"547.95905"	"1641.86258"	"1641.86369"	"-0.68"	"-0.00037"	"14/84"	"14"	"84"	"14563175.0960083"	"HCD"	"MS2"	"24.83733"	"373.4"	"86.006"	"42.5660"	"12300"	"12300"	"12286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"537.9"	""	"384.0"	""	"459.6"	""	"718.0"	""	"694.8"	"747.0"	""	"838"	"53"	"36.000"	"29.000"	"0.000202868222017738"	"25"	"0"	"1.903E-06"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"547.95917"	"1641.86295"	"1641.86369"	"-0.45"	"-0.00025"	"10/84"	"10"	"84"	"8573337.43963623"	"HCD"	"MS2"	"10.67921"	"250.9"	"100.000"	"42.8789"	"12428"	"12428"	"12409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"340.3"	""	"279.4"	""	"313.5"	""	"471.8"	""	"461.7"	"513.2"	""	"848"	"47"	"36.000"	"29.000"	"0.00078770908895888"	"24"	"0"	"1.319E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"547.95941"	"1641.86368"	"1641.86369"	"-0.01"	"0.00000"	"8/84"	"8"	"84"	"7058481.63342285"	"HCD"	"MS2"	"12.63587"	"217.9"	"100.000"	"42.7320"	"12402"	"12402"	"12383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"295.1"	""	"250.9"	""	"283.7"	""	"404.3"	"1.4"	"399.0"	"431.4"	""	"852"	"39"	"36.000"	"29.000"	"0.00510986703141636"	"23"	"0"	"2.622E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"547.95941"	"1641.86368"	"1641.86369"	"-0.01"	"0.00000"	"16/84"	"16"	"84"	"18924033.1428833"	"HCD"	"MS2"	"20.29429"	"432.7"	"76.832"	"42.4186"	"12274"	"12274"	"12258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"626.2"	""	"465.5"	""	"497.3"	""	"820.1"	""	"824.1"	"873.4"	""	"852"	"46"	"36.000"	"29.000"	"0.00115188626311037"	"25"	"0"	"3.319E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAEEPSHWK"	"[K].eAAEEPSHWk.[H]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"821.43671"	"1641.86614"	"1641.86369"	"1.49"	"0.00122"	"10/84"	"10"	"84"	"123864.388793945"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"42.5959"	"12347"	"12347"	"12319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"11.4"	""	"9.2"	""	"20.8"	""	"14.8"	"15.6"	""	"854"	"32"	"36.000"	"29.000"	"0.0254934067371298"	"24"	"0.0001686"	"0.001581"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWENHVEGQK"	"[K].gWENHVEGQk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"547.96246"	"1641.87284"	"1641.87493"	"-1.27"	"-0.00070"	"7/92"	"7"	"92"	"6207019.43695068"	"HCD"	"MS2"	"45.54662"	"193.7"	"100.000"	"39.8460"	"11199"	"11199"	"11178"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"314.0"	""	"232.9"	""	"243.0"	""	"317.3"	"0.7"	"379.6"	"347.7"	""	"866"	"6"	"36.000"	"29.000"	"10.4589454131466"	"13"	"0.0001991"	"0.004683"	"0.31"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSDGAASSYQLK"	"[K].gSDGAASSYQLk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"821.44678"	"1641.88628"	"1641.88482"	"0.89"	"0.00073"	"6/104"	"6"	"104"	"162986.212158203"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"50.3793"	"15474"	"15474"	"15446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"24.3"	""	"17.3"	""	"22.1"	""	"31.9"	"28.9"	""	"875"	"20"	"36.000"	"29.000"	"0.415889597224623"	"17"	"0.006423"	"0.07994"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.6087"	"0.0000"	"1"	"1"	"1"	"547.96826"	"1641.89023"	"1641.89221"	"-1.21"	"-0.00066"	"7/82"	"7"	"82"	"2466178.70910645"	"HCD"	"MS2"	"43.7634"	"63.3"	"100.000"	"75.9281"	"25844"	"25844"	"25817"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.4"	""	"69.2"	""	"80.9"	""	"131.2"	""	"116.7"	"135.5"	""	"865"	"23"	"36.000"	"29.000"	"0.213789372121806"	"23"	"0.0001686"	"0.00163"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.2174"	"0.0000"	"1"	"1"	"1"	"547.96838"	"1641.89060"	"1641.89221"	"-0.98"	"-0.00054"	"7/82"	"7"	"82"	"2537932.96099854"	"HCD"	"MS2"	"29.49475"	"62.4"	"100.000"	"76.0398"	"25921"	"25921"	"25897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.2"	""	"55.9"	""	"82.8"	""	"131.2"	""	"112.9"	"133.2"	""	"873"	"23"	"36.000"	"29.000"	"0.222835432489265"	""	"0.0001686"	"0.001134"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"547.96857"	"1641.89115"	"1641.89221"	"-0.65"	"-0.00036"	"8/82"	"8"	"82"	"1509585.52368164"	"HCD"	"MS2"	"11.66955"	"42.8"	"100.000"	"76.2418"	"25971"	"25971"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.4"	""	"50.0"	""	"69.4"	""	"62.2"	""	"77.5"	"88.8"	""	"871"	"37"	"36.000"	"29.000"	"0.00868936738168947"	"25"	"0"	"0.0003451"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8163"	"0.0000"	"1"	"1"	"1"	"821.44922"	"1641.89116"	"1641.89221"	"-0.64"	"-0.00053"	"9/82"	"9"	"82"	"270576.254272461"	"HCD"	"MS2"	"12.507"	"24.9"	"100.000"	"76.3582"	"26050"	"26050"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	"1.8"	"28.4"	""	"33.0"	""	"26.3"	""	"47.3"	"62.6"	""	"871"	"49"	"36.000"	"29.000"	"0.00060254315804221"	"24"	"0"	"4.124E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"547.96875"	"1641.89170"	"1641.89221"	"-0.32"	"-0.00017"	"8/82"	"8"	"82"	"1382499.0045166"	"HCD"	"MS2"	"13.97886"	"43.4"	"100.000"	"76.3536"	"26048"	"26048"	"26026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.8"	""	"51.9"	""	"73.5"	""	"59.5"	""	"73.3"	"94.8"	""	"876"	"31"	"36.000"	"29.000"	"0.03519444415173"	"23"	"9.9E-05"	"0.000956"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"821.44965"	"1641.89202"	"1641.89221"	"-0.12"	"-0.00010"	"9/82"	"9"	"82"	"416700.5703125"	"HCD"	"MS2"	"7.733845"	"40.4"	"100.000"	"76.1705"	"25942"	"25942"	"25923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"55.5"	""	"66.1"	""	"39.4"	"1.4"	"76.0"	"91.7"	""	"873"	"52"	"36.000"	"29.000"	"0.000267290945987863"	"24"	"0"	"8.379E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"821.44965"	"1641.89202"	"1641.89221"	"-0.12"	"-0.00010"	"7/82"	"7"	"82"	"311859.614196777"	"HCD"	"MS2"	"43.55898"	"28.2"	"100.000"	"75.8821"	"25825"	"25825"	"25801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"40.6"	""	"48.7"	""	"25.7"	"0.6"	"48.7"	"59.8"	""	"873"	"36"	"36.000"	"29.000"	"0.00999963730433133"	"22"	"0"	"3.53E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETMYQIk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"821.44971"	"1641.89214"	"1641.89221"	"-0.05"	"-0.00004"	"8/82"	"8"	"82"	"419809.948791504"	"HCD"	"MS2"	"22.35344"	"40.4"	"100.000"	"76.0512"	"25926"	"25926"	"25897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.1"	""	"63.8"	""	"63.5"	""	"34.3"	""	"66.8"	"90.1"	""	"873"	"49"	"36.000"	"29.000"	"0.000557165540046152"	"22"	"0"	"2.141E-06"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEDYVNEFSAR"	"[K].aIEDYVNEFSAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"821.91718"	"1642.82707"	"1642.82742"	"-0.21"	"-0.00017"	"4/112"	"4"	"112"	"155432.309936523"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"109.1981"	"39197"	"39197"	"39188"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"11.4"	""	"9.5"	""	"14.1"	""	"17.8"	"10.8"	""	"750"	"8"	"35.000"	"28.000"	"6.2955150679596"	"15"	"0.0042"	"0.04543"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIEDYVNEFSAR"	"[K].aIEDYVNEFSAR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"Q62930"	"Complement component C9 OS=Rattus norvegicus OX=10116 GN=C9 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"821.91748"	"1642.82768"	"1642.82742"	"0.16"	"0.00013"	"6/112"	"6"	"112"	"130100.14050293"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"109.5001"	"39323"	"39323"	"39312"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"10.8"	""	"11.2"	""	"21.1"	""	"17.5"	"15.2"	""	"726"	"19"	"35.000"	"28.000"	"0.418703532589057"	"15"	"0.0001991"	"0.005002"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYSDDIPHALR"	"[K].nLYSDDIPHALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"548.29633"	"1642.87442"	"1642.87504"	"-0.37"	"-0.00020"	"13/114"	"13"	"114"	"3693388.69390869"	"HCD"	"MS2"	"10.37679"	"47.1"	"100.000"	"74.1629"	"25128"	"25128"	"25110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.4"	""	"57.7"	""	"61.4"	""	"77.2"	""	"86.5"	"98.7"	""	"885"	"52"	"36.000"	"29.000"	"0.000250560885399427"	"23"	"0"	"1.972E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYSDDIPHALR"	"[K].nLYSDDIPHALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"548.29651"	"1642.87497"	"1642.87504"	"-0.04"	"-0.00002"	"10/114"	"10"	"114"	"3149955.19396973"	"HCD"	"MS2"	"3.523798"	"39.8"	"100.000"	"74.3093"	"25218"	"25218"	"25201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.3"	""	"43.7"	""	"55.8"	""	"65.8"	""	"83.4"	"81.4"	""	"895"	"36"	"36.000"	"29.000"	"0.0101109750717389"	"25"	"0"	"3.828E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPSFPEPLREER"	"[K].gPSFPEPLREER.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"P32362"	"Uroporphyrinogen decarboxylase (Fragment) OS=Rattus norvegicus OX=10116 GN=Urod PE=1 SV=1"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"548.29657"	"1642.87516"	"1642.87504"	"0.07"	"0.00004"	"6/110"	"6"	"110"	"2137772.01135254"	"HCD"	"MS2"	"36.19327"	"89.4"	"100.000"	"58.4295"	"18742"	"18742"	"18718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"160.1"	""	"114.6"	""	"129.2"	""	"125.8"	"1.6"	"159.7"	"155.1"	""	"894"	"16"	"36.000"	"29.000"	"1.09725488531121"	"18"	"0.005632"	"0.07066"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYSDDIPHALR"	"[K].nLYSDDIPHALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"548.29675"	"1642.87571"	"1642.87504"	"0.41"	"0.00022"	"12/114"	"12"	"114"	"2086236.02832031"	"HCD"	"MS2"	"16.92803"	"32.6"	"100.000"	"74.0215"	"25100"	"25100"	"25080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"43.3"	""	"49.4"	""	"54.1"	""	"62.8"	"61.6"	""	"905"	"43"	"36.000"	"29.000"	"0.00235298188431416"	"22"	"0"	"1.408E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLYSDDIPHALR"	"[K].nLYSDDIPHALR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"548.29724"	"1642.87717"	"1642.87504"	"1.30"	"0.00071"	"13/114"	"13"	"114"	"2214530.70062256"	"HCD"	"MS2"	"9.527473"	"38.9"	"100.000"	"73.8730"	"25010"	"25010"	"24993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.8"	""	"52.1"	""	"57.9"	""	"62.7"	"0.1"	"68.0"	"79.8"	""	"906"	"57"	"36.000"	"29.000"	"9.70729442307387E-05"	"25"	"0"	"3.819E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPDELAHVEK"	"[K].fPDELAHVEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.2353"	"0.0000"	"1"	"1"	"1"	"548.31097"	"1642.91837"	"1642.92048"	"-1.28"	"-0.00070"	"8/84"	"8"	"84"	"609124.56451416"	"HCD"	"MS2"	"20.20104"	"25.0"	"100.000"	"88.1012"	"30756"	"30756"	"30738"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"29.4"	""	"29.4"	""	"35.1"	"0.4"	"51.6"	"62.0"	""	"868"	"17"	"36.000"	"29.000"	"0.958274054130204"	"27"	"0.002711"	"0.02829"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPDELAHVEK"	"[K].fPDELAHVEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"548.31183"	"1642.92093"	"1642.92048"	"0.28"	"0.00015"	"8/84"	"8"	"84"	"576303.889587402"	"HCD"	"MS2"	"37.75636"	"22.9"	"100.000"	"88.0146"	"30759"	"30759"	"30739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.8"	""	"24.5"	""	"28.1"	""	"37.0"	""	"46.9"	"57.6"	""	"870"	"10"	"36.000"	"29.000"	"4.58658299930198"	"19"	"0.002189"	"0.02015"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"822.40802"	"1643.80876"	"1643.81143"	"-1.62"	"-0.00133"	"5/108"	"5"	"108"	"220947.000183105"	"HCD"	"MS2"	"50.11639"	"17.3"	"100.000"	"83.1021"	"28777"	"28777"	"28748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.3"	""	"20.5"	""	"24.8"	""	"24.8"	"0.8"	"29.3"	"35.1"	""	"657"	"12"	"35.000"	"28.000"	"2.13076411420596"	"18"	"0.002035"	"0.01789"	"0.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.8605"	"0.0000"	"1"	"1"	"1"	"822.40973"	"1643.81218"	"1643.81143"	"0.46"	"0.00037"	"10/108"	"10"	"108"	"269081.863952637"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"83.3969"	"28896"	"28896"	"28878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.6"	""	"20.5"	""	"19.8"	""	"27.3"	""	"27.0"	"35.2"	""	"652"	"43"	"35.000"	"28.000"	"0.00160404888632153"	"21"	"0"	"3.304E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"822.40991"	"1643.81255"	"1643.81143"	"0.68"	"0.00056"	"6/108"	"6"	"108"	"182654.101928711"	"HCD"	"MS2"	"23.34711"	"14.5"	"100.000"	"83.0567"	"28730"	"28730"	"28706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.4"	""	"14.0"	""	"18.7"	""	"24.4"	""	"30.4"	"30.4"	""	"653"	"25"	"35.000"	"28.000"	"0.114520486845513"	"14"	"9.9E-05"	"0.0008853"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEDYALPSYVDR"	"[K].sEDYALPSYVDR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"822.41028"	"1643.81328"	"1643.81143"	"1.12"	"0.00092"	"7/108"	"7"	"108"	"275978.827636719"	"HCD"	"MS2"	"8.424184"	"16.5"	"100.000"	"83.3539"	"28850"	"28850"	"28832"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.4"	""	"17.5"	""	"21.4"	""	"24.0"	"1.3"	"32.8"	"32.0"	""	"664"	"39"	"35.000"	"28.000"	"0.00446825637546575"	"21"	"0"	"0.0003309"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGGFDNTAMSK"	"[K].aSGGFDNTAMSk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"822.42780"	"1643.84831"	"1643.84633"	"1.21"	"0.00099"	"12/116"	"12"	"116"	"317897.475891113"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"55.1047"	"17396"	"17396"	"17374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"48.2"	""	"42.3"	""	"46.9"	"0.7"	"54.4"	"63.1"	""	"809"	"39"	"36.000"	"29.000"	"0.00554521674413683"	"17"	"0"	"1.462E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVGPEEALSSGEAR"	"[K].lVGPEEALSSGEAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"Q5U367"	"Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Rattus norvegicus OX=10116 GN=Plod3 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"822.44403"	"1643.88078"	"1643.88018"	"0.37"	"0.00030"	"8/118"	"8"	"118"	"113636.477355957"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"78.6329"	"26938"	"26938"	"26913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.0"	""	"5.4"	""	"7.9"	""	"14.5"	""	"14.0"	"15.0"	""	"918"	"17"	"36.000"	"29.000"	"1.00418258539284"	"17"	"0.0001991"	"0.003744"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQASTSNTVSK"	"[K].yQASTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"822.45251"	"1643.89775"	"1643.90047"	"-1.65"	"-0.00136"	"14/110"	"14"	"110"	"343044.979553223"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"39.2096"	"10979"	"10979"	"10957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"39.5"	""	"36.4"	""	"47.2"	"0.2"	"70.5"	"65.0"	""	"969"	"36"	"36.000"	"29.000"	"0.0132829268629906"	"22"	"0"	"6.009E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQASTSNTVSK"	"[K].yQASTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"2"	"2"	"0.6133"	"0.0000"	"1"	"1"	"1"	"822.45294"	"1643.89861"	"1643.90047"	"-1.13"	"-0.00093"	"10/110"	"10"	"110"	"446019.897521973"	"HCD"	"MS2"	"0"	"40.6"	"100.000"	"39.2029"	"10942"	"10942"	"10919"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.4"	""	"52.3"	""	"46.9"	""	"69.3"	""	"79.8"	"91.3"	""	"964"	"75"	"36.000"	"29.000"	"1.45561672923377E-06"	""	"0"	"2.175E-08"	"1.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQASTSNTVSK"	"[K].yQASTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.4571"	"0.0000"	"1"	"1"	"1"	"548.63843"	"1643.90073"	"1643.90047"	"0.16"	"0.00009"	"13/110"	"13"	"110"	"1803051.62176514"	"HCD"	"MS2"	"23.76078"	"85.4"	"100.000"	"39.2991"	"10981"	"10981"	"10960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.6"	""	"112.3"	""	"113.6"	""	"157.3"	"4.4"	"171.8"	"159.4"	""	"995"	"35"	"36.000"	"29.000"	"0.0163980831808285"	""	"0"	"8.765E-05"	"0.666"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YQASTSNTVSK"	"[K].yQASTSNTVSk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"Q66H98"	"Caveolae-associated protein 2 OS=Rattus norvegicus OX=10116 GN=Cavin2 PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"548.63873"	"1643.90165"	"1643.90047"	"0.71"	"0.00039"	"10/110"	"10"	"110"	"2862113.5536499"	"HCD"	"MS2"	"0"	"147.6"	"100.000"	"39.1340"	"10949"	"10949"	"10931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"178.4"	""	"177.7"	""	"182.0"	"2.0"	"242.7"	"9.4"	"319.2"	"290.5"	""	"995"	"26"	"36.000"	"29.000"	"0.129955027381361"	"27"	"9.9E-05"	"0.0004203"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYDDAIVSQK"	"[R].fYDDAIVSQk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"F1LNJ2"	"U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1"	"0"	"2"	"2"	"0.4615"	"0.0000"	"1"	"1"	"1"	"822.45502"	"1643.90276"	"1643.90449"	"-1.06"	"-0.00087"	"4/84"	"4"	"84"	"99377.9710693359"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"95.3667"	"33722"	"33722"	"33696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"5.1"	""	"7.6"	""	"18.7"	""	"14.9"	"16.7"	""	"972"	"13"	"36.000"	"29.000"	"2.69548096497544"	"21"	"0.007752"	"0.0993"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLSGPQEAEK"	"[R].vQLSGPQEAEk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"822.47021"	"1643.93315"	"1643.93686"	"-2.25"	"-0.00185"	"6/110"	"6"	"110"	"174610.950744629"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"56.7667"	"18100"	"18100"	"18069"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.6"	""	"11.0"	""	"15.2"	""	"17.2"	""	"27.6"	"25.7"	""	"928"	"24"	"36.000"	"29.000"	"0.198846513464412"	"22"	"0.0001991"	"0.002941"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQLSGPQEAEK"	"[R].vQLSGPQEAEk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"Q68FW9"	"COP9 signalosome complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Cops3 PE=1 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"822.47205"	"1643.93682"	"1643.93686"	"-0.03"	"-0.00002"	"5/110"	"5"	"110"	"135749.329528809"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"57.1165"	"18207"	"18207"	"18184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"12.4"	""	"16.8"	""	"14.3"	""	"24.3"	"24.2"	""	"915"	"17"	"36.000"	"29.000"	"1.00783885684696"	"17"	"0.001488"	"0.01235"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHNHGELSAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"548.96783"	"1644.88895"	"1644.89069"	"-1.06"	"-0.00058"	"10/114"	"10"	"114"	"439153.676696777"	"HCD"	"MS2"	"57.86484"	"20.1"	"100.000"	"61.1368"	"19845"	"19845"	"19818"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.8"	""	"22.9"	""	"26.2"	""	"34.0"	"1.7"	"43.7"	"38.3"	""	"1020"	"22"	"37.000"	"30.000"	"0.342428714992236"	"16"	"9.9E-05"	"0.0004433"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLDNSVFSEHR"	"[K].iVLDNSVFSEHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"548.96790"	"1644.88913"	"1644.89069"	"-0.94"	"-0.00052"	"11/114"	"11"	"114"	"658956.040100098"	"HCD"	"MS2"	"21.57025"	"11.5"	"100.000"	"89.8638"	"31464"	"31464"	"31446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"15.6"	""	"13.4"	""	"24.4"	""	"22.3"	"21.6"	""	"1021"	"51"	"37.000"	"30.000"	"0.000413995620034386"	"18"	"0"	"4.619E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLDNSVFSEHR"	"[K].iVLDNSVFSEHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"548.96790"	"1644.88913"	"1644.89069"	"-0.94"	"-0.00052"	"12/114"	"12"	"114"	"799072.357727051"	"HCD"	"MS2"	"3.50709"	"11.7"	"100.000"	"90.1656"	"31587"	"31587"	"31567"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.5"	""	"10.6"	""	"14.8"	""	"22.5"	""	"28.1"	"20.6"	""	"1021"	"24"	"37.000"	"30.000"	"0.223869921214131"	"20"	"9.9E-05"	"0.0007047"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHNHGELSAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"548.96814"	"1644.88987"	"1644.89069"	"-0.50"	"-0.00027"	"12/114"	"12"	"114"	"586143.49987793"	"HCD"	"MS2"	"19.53068"	"22.1"	"100.000"	"61.0493"	"19841"	"19841"	"19816"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"26.4"	""	"28.1"	""	"34.4"	""	"52.6"	"42.8"	""	"1019"	"22"	"37.000"	"30.000"	"0.329719162723903"	"17"	"9.9E-05"	"0.0006249"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHNHGELSAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"548.96820"	"1644.89005"	"1644.89069"	"-0.39"	"-0.00021"	"13/114"	"13"	"114"	"1247663.98052979"	"HCD"	"MS2"	"15.59966"	"29.7"	"100.000"	"60.7134"	"19704"	"19704"	"19687"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"32.1"	""	"41.8"	""	"45.6"	"0.6"	"66.9"	"62.8"	""	"1019"	"25"	"37.000"	"30.000"	"0.158907424309586"	"15"	"0"	"0.0003184"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPVHNHGELSAI"	"[K].lEPVHNHGELSAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"P47860"	"ATP-dependent 6-phosphofructokinase, platelet type OS=Rattus norvegicus OX=10116 GN=Pfkp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.96844"	"1644.89078"	"1644.89069"	"0.06"	"0.00003"	"9/114"	"9"	"114"	"1254779.95544434"	"HCD"	"MS2"	"7.840628"	"29.8"	"100.000"	"60.8193"	"19715"	"19715"	"19695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.0"	""	"35.9"	""	"38.2"	""	"43.9"	""	"67.9"	"63.3"	""	"1056"	"19"	"37.000"	"30.000"	"0.67086312755011"	"14"	"9.9E-05"	"0.0009694"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLDNSVFSEHR"	"[K].iVLDNSVFSEHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.96881"	"1644.89188"	"1644.89069"	"0.73"	"0.00040"	"10/114"	"10"	"114"	"837729.425231934"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"89.9481"	"31538"	"31538"	"31519"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.9"	""	"15.7"	""	"12.1"	""	"25.7"	""	"22.2"	"23.0"	""	"1051"	"33"	"37.000"	"30.000"	"0.0272629420457169"	"15"	"0"	"0.0002677"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVLDNSVFSEHR"	"[K].iVLDNSVFSEHR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"548.96942"	"1644.89371"	"1644.89069"	"1.84"	"0.00101"	"11/114"	"11"	"114"	"297487.388671875"	"HCD"	"MS2"	"16.48468"	"9.0"	"100.000"	"89.6548"	"31421"	"31421"	"31398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.3"	""	"8.8"	""	"10.0"	""	"14.8"	""	"23.3"	"18.1"	""	"1069"	"38"	"37.000"	"30.000"	"0.00885009045474463"	"15"	"0"	"0.0002177"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RQELEAELAK"	"[K].rQELEAELAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"1"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"548.99384"	"1644.96695"	"1644.96849"	"-0.93"	"-0.00051"	"10/98"	"10"	"98"	"1685817.38317871"	"HCD"	"MS2"	"51.2628"	"69.2"	"100.000"	"57.3047"	"18283"	"18283"	"18264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.1"	""	"90.7"	""	"85.6"	""	"113.8"	""	"140.9"	"138.8"	""	"864"	"22"	"36.000"	"29.000"	"0.294092362955696"	"24"	"9.9E-05"	"0.0004607"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDDEVAQLR"	"[K].lkDDEVAQLR.[K]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"1"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"548.99384"	"1644.96695"	"1644.96849"	"-0.93"	"-0.00051"	"6/92"	"6"	"92"	"3338786.10955811"	"HCD"	"MS2"	"34.0451"	"162.9"	"100.000"	"58.3054"	"18691"	"18691"	"18670"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"283.8"	""	"223.0"	""	"214.1"	""	"226.0"	""	"300.7"	"295.2"	""	"864"	"12"	"36.000"	"29.000"	"2.88060524300285"	"14"	"0.0001991"	"0.002043"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RQELEAELAK"	"[K].rQELEAELAk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"1"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"548.99402"	"1644.96750"	"1644.96849"	"-0.60"	"-0.00033"	"6/98"	"6"	"98"	"1303476.49536133"	"HCD"	"MS2"	"34.45772"	"58.4"	"100.000"	"57.0469"	"18213"	"18213"	"18193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"75.9"	""	"68.9"	""	"97.8"	""	"116.7"	"127.4"	""	"853"	"10"	"36.000"	"29.000"	"3.98032959289917"	"18"	"0.0005161"	"0.006841"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDDEVAQLR"	"[K].lkDDEVAQLR.[K]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"1"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"548.99420"	"1644.96805"	"1644.96849"	"-0.27"	"-0.00015"	"8/92"	"8"	"92"	"9030320.6809082"	"HCD"	"MS2"	"28.87397"	"398.1"	"100.000"	"57.9997"	"18566"	"18566"	"18550"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"723.9"	""	"529.3"	""	"532.8"	""	"573.8"	""	"683.2"	"728.0"	""	"851"	"13"	"36.000"	"29.000"	"1.96290627975442"	"15"	"0.0001991"	"0.003347"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDDEVAQLR"	"[K].lkDDEVAQLR.[K]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"1"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"548.99426"	"1644.96823"	"1644.96849"	"-0.16"	"-0.00009"	"8/92"	"8"	"92"	"9366380.45599365"	"HCD"	"MS2"	"25.36563"	"454.0"	"100.000"	"57.7185"	"18487"	"18487"	"18466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"823.0"	""	"596.2"	""	"616.8"	""	"667.0"	""	"798.8"	"798.6"	""	"847"	"13"	"36.000"	"29.000"	"2.09823155805829"	"15"	"0.0001686"	"0.001893"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38696"	"1645.76665"	"1645.76957"	"-1.77"	"-0.00146"	"6/94"	"6"	"94"	"280413.06817627"	"HCD"	"MS2"	"34.86836"	"20.0"	"100.000"	"100.1094"	"35609"	"35609"	"35588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.8"	""	"28.8"	""	"22.2"	""	"33.1"	"1.1"	"39.9"	"34.2"	""	"381"	"17"	"32.000"	"25.000"	"0.388951078459546"	"14"	"0.0001991"	"0.004635"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38904"	"1645.77080"	"1645.76957"	"0.75"	"0.00062"	"4/94"	"4"	"94"	"193789.555969238"	"HCD"	"MS2"	"5.277276"	"12.1"	"100.000"	"100.4002"	"35727"	"35727"	"35708"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"13.3"	""	"16.3"	""	"20.2"	""	"24.2"	"24.9"	""	"420"	"13"	"33.000"	"26.000"	"1.04044540069006"	"13"	"0.003317"	"0.03654"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWDYETGDFER"	"[K].vWDYETGDFER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"823.38989"	"1645.77251"	"1645.76957"	"1.79"	"0.00147"	"5/94"	"5"	"94"	"379335.12109375"	"HCD"	"MS2"	"37.41734"	"24.5"	"100.000"	"100.2259"	"35684"	"35684"	"35665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"25.9"	""	"26.6"	""	"47.9"	""	"45.8"	"44.4"	""	"432"	"27"	"33.000"	"26.000"	"0.0452328290463793"	"14"	"9.9E-05"	"0.0006128"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6739"	"0.0000"	"1"	"1"	"1"	"549.30164"	"1645.89035"	"1645.89184"	"-0.90"	"-0.00049"	"13/100"	"13"	"100"	"4345491.53070068"	"HCD"	"MS2"	"11.34899"	"112.5"	"100.000"	"29.3062"	"6942"	"6942"	"6915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.5"	""	"164.0"	""	"166.9"	""	"138.4"	""	"207.0"	"217.1"	""	"1200"	"46"	"37.000"	"30.000"	"0.00152107717829874"	"19"	"0"	"3.36E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVMVGmGQk.[D]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6889"	"0.0000"	"1"	"1"	"1"	"549.30194"	"1645.89127"	"1645.89184"	"-0.35"	"-0.00019"	"13/100"	"13"	"100"	"3497445.43078613"	"HCD"	"MS2"	"11.02937"	"98.8"	"100.000"	"29.1587"	"6922"	"6922"	"6901"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.7"	""	"138.8"	""	"138.3"	""	"123.5"	""	"180.1"	"200.8"	""	"1193"	"45"	"37.000"	"30.000"	"0.00205878240513838"	"19"	"0"	"3.925E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"549.31830"	"1645.94034"	"1645.94127"	"-0.57"	"-0.00031"	"10/82"	"10"	"82"	"192715.607543945"	"HCD"	"MS2"	"14.75838"	"6.8"	"100.000"	"109.4213"	"39293"	"39293"	"39284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.1"	""	"8.8"	""	"8.7"	""	"9.5"	""	"14.9"	"14.8"	""	"1022"	"28"	"37.000"	"30.000"	"0.0754086038503982"	"20"	"0.0001686"	"0.00134"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"549.31866"	"1645.94144"	"1645.94127"	"0.10"	"0.00006"	"11/82"	"11"	"82"	"340245.346496582"	"HCD"	"MS2"	"18.07549"	"10.7"	"100.000"	"108.8729"	"39077"	"39077"	"39062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"12.2"	""	"13.6"	""	"18.5"	""	"18.2"	"20.1"	""	"1021"	"39"	"37.000"	"30.000"	"0.00584784356607947"	"24"	"0"	"0.0002088"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"549.31891"	"1645.94217"	"1645.94127"	"0.55"	"0.00030"	"11/82"	"11"	"82"	"212697.598937988"	"HCD"	"MS2"	"4.547048"	"7.2"	"100.000"	"109.1399"	"39176"	"39176"	"39166"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"8.7"	""	"10.4"	""	"11.3"	""	"13.0"	"15.8"	""	"1033"	"35"	"37.000"	"30.000"	"0.01799162232161"	"24"	"9.9E-05"	"0.000411"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"823.47473"	"1645.94219"	"1645.94127"	"0.55"	"0.00046"	"7/82"	"7"	"82"	"143069.685058594"	"HCD"	"MS2"	"39.59599"	"10.4"	"100.000"	"109.1952"	"39212"	"39212"	"39199"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"10.9"	""	"13.5"	""	"16.0"	""	"16.8"	"21.2"	""	"1033"	"13"	"37.000"	"30.000"	"2.32311295052383"	"15"	"0.00307"	"0.03305"	"0.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLEELEEGQK"	"[R].lLEELEEGQk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"Q7M767"	"Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus OX=10116 GN=Ube2v2 PE=1 SV=3"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"549.31934"	"1645.94345"	"1645.94127"	"1.33"	"0.00073"	"10/82"	"10"	"82"	"250293.502563477"	"HCD"	"MS2"	"25.73196"	"8.6"	"100.000"	"109.1395"	"39191"	"39191"	"39179"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"9.6"	""	"8.0"	""	"16.6"	""	"13.6"	"18.7"	""	"1017"	"35"	"37.000"	"30.000"	"0.0143976282986399"	"23"	"9.9E-05"	"0.0005355"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLVSEDNVAK"	"[R].nVLVSEDNVAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"549.32141"	"1645.94968"	"1645.95251"	"-1.72"	"-0.00094"	"8/104"	"8"	"104"	"858367.996765137"	"HCD"	"MS2"	"22.70481"	"34.2"	"100.000"	"68.9715"	"23054"	"23054"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.3"	""	"45.7"	""	"47.4"	""	"57.9"	"2.6"	"56.0"	"62.7"	""	"957"	"33"	"36.000"	"29.000"	"0.0223811265105925"	"17"	"0"	"0.0001308"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLVSEDNVAK"	"[R].nVLVSEDNVAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"823.47876"	"1645.95024"	"1645.95251"	"-1.38"	"-0.00113"	"15/104"	"15"	"104"	"257707.423828125"	"HCD"	"MS2"	"14.26148"	"21.4"	"100.000"	"68.9761"	"23056"	"23056"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.8"	""	"24.7"	""	"29.8"	""	"35.7"	"1.3"	"40.1"	"36.7"	""	"955"	"55"	"36.000"	"29.000"	"0.000140272770881163"	"25"	"0"	"0.0001649"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLVSEDNVAK"	"[R].nVLVSEDNVAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"823.47955"	"1645.95183"	"1645.95251"	"-0.41"	"-0.00034"	"17/104"	"17"	"104"	"280357.046569824"	"HCD"	"MS2"	"7.234922"	"22.0"	"100.000"	"68.9194"	"22999"	"22999"	"22971"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"31.6"	""	"27.9"	""	"29.9"	""	"44.3"	"42.2"	""	"961"	"66"	"36.000"	"29.000"	"1.14470450502685E-05"	"24"	"0"	"2.132E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLVSEDNVAK"	"[R].nVLVSEDNVAk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"P32577"	"Tyrosine-protein kinase CSK OS=Rattus norvegicus OX=10116 GN=Csk PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.32281"	"1645.95389"	"1645.95251"	"0.84"	"0.00046"	"11/104"	"11"	"104"	"728482.671264648"	"HCD"	"MS2"	"48.12119"	"32.8"	"100.000"	"68.7719"	"22939"	"22939"	"22920"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.9"	""	"41.6"	""	"46.4"	""	"54.3"	""	"64.2"	"60.6"	""	"909"	"22"	"36.000"	"29.000"	"0.275127427575654"	"14"	"0.0001991"	"0.003692"	"0.331"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYMAAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"549.61420"	"1646.82804"	"1646.82823"	"-0.12"	"-0.00007"	"11/104"	"11"	"104"	"792982.091552734"	"HCD"	"MS2"	"5.254619"	"31.0"	"100.000"	"63.3960"	"20760"	"20760"	"20731"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"36.0"	""	"41.8"	""	"37.9"	""	"58.7"	"62.4"	""	"850"	"39"	"36.000"	"29.000"	"0.00516879050274707"	"18"	"0"	"0.0002077"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYMAAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"823.91779"	"1646.82829"	"1646.82823"	"0.04"	"0.00003"	"10/104"	"10"	"104"	"297160.33807373"	"HCD"	"MS2"	"0"	"30.4"	"100.000"	"63.3232"	"20762"	"20762"	"20734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.1"	""	"35.1"	""	"26.1"	""	"29.1"	"0.0"	"60.3"	"64.9"	""	"852"	"76"	"36.000"	"29.000"	"1.13346887547429E-06"	"23"	"0"	"1.804E-07"	"1.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYMAAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"823.91797"	"1646.82866"	"1646.82823"	"0.26"	"0.00021"	"9/104"	"9"	"104"	"251570.257751465"	"HCD"	"MS2"	"0"	"26.7"	"100.000"	"63.3131"	"20726"	"20726"	"20699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.0"	""	"31.1"	""	"25.6"	""	"22.5"	""	"58.5"	"56.2"	""	"844"	"64"	"36.000"	"29.000"	"1.85914152399765E-05"	"23"	"0"	"1.026E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYMAAk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"549.61450"	"1646.82895"	"1646.82823"	"0.44"	"0.00024"	"10/104"	"10"	"104"	"711427.748596191"	"HCD"	"MS2"	"10.47812"	"26.0"	"100.000"	"63.3209"	"20761"	"20761"	"20734"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.3"	""	"37.4"	""	"31.3"	""	"30.3"	""	"51.2"	"54.6"	""	"845"	"32"	"36.000"	"29.000"	"0.0247073810551043"	"17"	"0.0001686"	"0.001283"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDLTHFNQK"	"[K].eGDLTHFNQk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"549.63452"	"1646.88901"	"1646.89024"	"-0.75"	"-0.00041"	"7/84"	"7"	"84"	"3714710.80548096"	"HCD"	"MS2"	"26.66302"	"124.4"	"100.000"	"48.9291"	"14918"	"14918"	"14900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"222.1"	""	"151.7"	""	"143.5"	""	"214.9"	""	"231.3"	"215.3"	""	"1181"	"39"	"37.000"	"30.000"	"0.00667144487614287"	"20"	"0"	"2.198E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGDLTHFNQK"	"[K].eGDLTHFNQk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"549.63495"	"1646.89029"	"1646.89024"	"0.03"	"0.00002"	"11/84"	"11"	"84"	"3526048.50793457"	"HCD"	"MS2"	"26.69137"	"114.0"	"100.000"	"49.2640"	"15020"	"15020"	"14998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.3"	""	"132.7"	""	"151.9"	""	"170.4"	"1.0"	"205.5"	"208.5"	""	"1184"	"43"	"37.000"	"30.000"	"0.00323833450033231"	"18"	"0"	"1.459E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPAESDEFLAR"	"[R].iLGPAESDEFLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"823.95081"	"1646.89433"	"1646.89510"	"-0.47"	"-0.00038"	"12/102"	"12"	"102"	"154031.57800293"	"HCD"	"MS2"	"14.93303"	"7.8"	"100.000"	"107.3348"	"38522"	"38522"	"38510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.3"	""	"9.5"	""	"9.1"	""	"13.6"	""	"17.7"	"15.7"	""	"1178"	"27"	"37.000"	"30.000"	"0.124771470866137"	"23"	"0.0001991"	"0.004367"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPAESDEFLAR"	"[R].iLGPAESDEFLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.8049"	"0.0000"	"1"	"1"	"1"	"823.95166"	"1646.89604"	"1646.89510"	"0.57"	"0.00047"	"8/102"	"8"	"102"	"169645.780029297"	"HCD"	"MS2"	"8.949471"	"9.8"	"100.000"	"107.0608"	"38396"	"38396"	"38382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"11.4"	""	"13.7"	""	"14.9"	""	"16.5"	"21.5"	""	"1210"	"41"	"37.000"	"30.000"	"0.0049631268431954"	"23"	"0"	"0.0001984"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGPAESDEFLAR"	"[R].iLGPAESDEFLAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"549.63690"	"1646.89615"	"1646.89510"	"0.64"	"0.00035"	"11/102"	"11"	"102"	"191197.497802734"	"HCD"	"MS2"	"28.69187"	"5.0"	"100.000"	"107.4856"	"38580"	"38580"	"38568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.7"	""	"7.0"	""	"8.7"	""	"8.9"	""	"7.6"	"8.4"	""	"1210"	"25"	"37.000"	"30.000"	"0.192200881274311"	"21"	"0.0001686"	"0.001446"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPHQLNSHLK"	"[R].dPHQLNSHLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"4"	"4"	"0.1250"	"0.0000"	"1"	"1"	"1"	"412.48892"	"1646.93386"	"1646.93786"	"-2.43"	"-0.00100"	"5/96"	"5"	"96"	"2567195.4644165"	"HCD"	"MS2"	"16.54621"	"118.1"	"100.000"	"34.9450"	"9214"	"9214"	"9199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.3"	""	"90.5"	""	"105.1"	""	"213.6"	"0.9"	"315.3"	"298.3"	""	"1098"	"16"	"37.000"	"30.000"	"1.35385559614165"	"28"	"0.0001991"	"0.004222"	"0.319"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPHQLNSHLK"	"[R].dPHQLNSHLk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"Q2IBC5"	"Caveolin-2 OS=Rattus norvegicus OX=10116 GN=Cav2 PE=1 SV=2"	"0"	"4"	"4"	"0.7000"	"0.0000"	"1"	"1"	"1"	"412.48944"	"1646.93593"	"1646.93786"	"-1.17"	"-0.00048"	"9/96"	"9"	"96"	"2288192.98822021"	"HCD"	"MS2"	"21.89903"	"109.0"	"100.000"	"34.8668"	"9220"	"9220"	"9201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.1"	""	"88.2"	""	"103.5"	""	"208.6"	"2.3"	"284.3"	"263.3"	""	"1106"	"20"	"37.000"	"30.000"	"0.495136715348925"	"20"	"0.0001991"	"0.002951"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDSEAELQR"	"[K].lkDSEAELQR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"549.65247"	"1646.94284"	"1646.94776"	"-2.98"	"-0.00164"	"13/96"	"13"	"96"	"3347136.19000244"	"HCD"	"MS2"	"0"	"163.9"	"100.000"	"44.4851"	"13084"	"13084"	"13056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"274.0"	""	"193.4"	""	"188.6"	""	"283.4"	""	"329.0"	"287.0"	""	"1103"	"3"	"37.000"	"30.000"	"25.9146600895776"	"14"	"0.007831"	"0.1001"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LKDSEAELQR"	"[K].lkDSEAELQR.[R]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"1"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"549.65308"	"1646.94468"	"1646.94776"	"-1.87"	"-0.00103"	"5/96"	"5"	"96"	"3545887.99798584"	"HCD"	"MS2"	"39.63034"	"165.1"	"100.000"	"44.2195"	"13011"	"13011"	"12985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"277.8"	""	"178.7"	""	"197.4"	""	"280.4"	""	"321.1"	"311.8"	""	"1073"	"22"	"37.000"	"30.000"	"0.326264428186032"	"17"	"0.001049"	"0.00879"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGHFAAFEEPK"	"[R].gGHFAAFEEPk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"549.96747"	"1647.88785"	"1647.88951"	"-1.01"	"-0.00055"	"9/82"	"9"	"82"	"2977133.13165283"	"HCD"	"MS2"	"3.826544"	"73.0"	"100.000"	"56.8482"	"18097"	"18097"	"18081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.0"	""	"101.2"	""	"109.9"	""	"109.6"	"0.2"	"147.3"	"123.0"	""	"1159"	"26"	"37.000"	"30.000"	"0.155974441887565"	"18"	"0"	"2.978E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGHFAAFEEPK"	"[R].gGHFAAFEEPk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"549.96783"	"1647.88895"	"1647.88951"	"-0.34"	"-0.00019"	"7/82"	"7"	"82"	"3434654.815979"	"HCD"	"MS2"	"7.121694"	"81.7"	"100.000"	"56.5558"	"18014"	"18014"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.9"	""	"107.4"	""	"123.6"	""	"137.4"	""	"166.7"	"134.7"	""	"1165"	"38"	"37.000"	"30.000"	"0.00847804914438996"	"20"	"0"	"3.351E-06"	"0.957"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"824.44873"	"1647.89018"	"1647.89035"	"-0.10"	"-0.00008"	"15/112"	"15"	"112"	"239382.79876709"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"94.5877"	"33407"	"33407"	"33391"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.1"	""	"12.9"	""	"12.0"	""	"23.7"	""	"19.7"	"20.9"	""	"1175"	"48"	"37.000"	"30.000"	"0.00103993901301148"	"18"	"0"	"1.256E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.44885"	"1647.89043"	"1647.89035"	"0.05"	"0.00004"	"8/112"	"8"	"112"	"218207.385620117"	"HCD"	"MS2"	"13.74733"	"14.7"	"100.000"	"94.2946"	"33289"	"33289"	"33262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.8"	""	"18.0"	""	"17.2"	""	"29.9"	""	"32.2"	"26.2"	""	"1160"	"38"	"37.000"	"30.000"	"0.00960346578812326"	"15"	"0"	"3.511E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"824.44885"	"1647.89043"	"1647.89035"	"0.05"	"0.00004"	"9/112"	"9"	"112"	"284608.228881836"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"94.6111"	"33382"	"33382"	"33367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.9"	""	"15.4"	""	"17.2"	""	"31.3"	""	"25.4"	"23.7"	""	"1160"	"58"	"37.000"	"30.000"	"9.96386864551401E-05"	"20"	"0"	"1.278E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFSVVADTPELQR"	"[K].gFSVVADTPELQR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.44916"	"1647.89104"	"1647.89035"	"0.42"	"0.00034"	"8/112"	"8"	"112"	"185931.445983887"	"HCD"	"MS2"	"22.6181"	"13.5"	"100.000"	"94.3298"	"33268"	"33268"	"33243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"19.0"	""	"13.1"	""	"25.8"	""	"31.5"	"24.3"	""	"1163"	"27"	"37.000"	"30.000"	"0.115225796550567"	"14"	"0"	"0.0001485"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGHFAAFEEPK"	"[R].gGHFAAFEEPk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"P07687"	"Epoxide hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Ephx1 PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"549.96893"	"1647.89225"	"1647.88951"	"1.66"	"0.00091"	"12/82"	"12"	"82"	"846316.571350098"	"HCD"	"MS2"	"10.99299"	"31.0"	"100.000"	"57.1486"	"18220"	"18220"	"18196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.3"	""	"35.5"	""	"50.5"	""	"49.7"	""	"64.8"	"54.5"	""	"1153"	"25"	"37.000"	"30.000"	"0.203141807155994"	"16"	"9.9E-05"	"0.0006856"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"549.98010"	"1647.92575"	"1647.92674"	"-0.60"	"-0.00033"	"14/108"	"14"	"108"	"1583658.07373047"	"HCD"	"MS2"	"3.151345"	"19.6"	"100.000"	"65.0984"	"21483"	"21483"	"21463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.0"	""	"25.4"	""	"24.9"	""	"32.9"	""	"37.1"	"42.1"	""	"1195"	"58"	"37.000"	"30.000"	"8.67636691508675E-05"	"24"	"0"	"9.106E-07"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"549.98029"	"1647.92630"	"1647.92674"	"-0.26"	"-0.00014"	"6/108"	"6"	"108"	"593086.65637207"	"HCD"	"MS2"	"11.44443"	"17.6"	"100.000"	"65.4852"	"21641"	"21641"	"21616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.4"	""	"19.8"	""	"26.0"	""	"25.2"	""	"37.9"	"35.9"	""	"1198"	"33"	"37.000"	"30.000"	"0.0302988972539865"	"15"	"9.9E-05"	"0.0009104"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"549.98053"	"1647.92704"	"1647.92674"	"0.18"	"0.00010"	"15/108"	"15"	"108"	"1590935.0022583"	"HCD"	"MS2"	"8.271957"	"20.4"	"100.000"	"65.1318"	"21463"	"21463"	"21441"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"24.2"	""	"23.2"	""	"36.8"	"1.4"	"39.2"	"40.0"	""	"1180"	"55"	"37.000"	"30.000"	"0.000205519015871247"	"25"	"0"	"4.985E-07"	"1.128"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"549.98065"	"1647.92740"	"1647.92674"	"0.40"	"0.00022"	"14/108"	"14"	"108"	"781434.138793945"	"HCD"	"MS2"	"19.2126"	"18.9"	"100.000"	"64.7857"	"21356"	"21356"	"21337"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"22.6"	""	"26.7"	""	"35.4"	""	"38.4"	"37.2"	""	"1180"	"46"	"37.000"	"30.000"	"0.00141857405200409"	"26"	"0"	"2.494E-06"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVVETPLLHPER"	"[R].eVVETPLLHPER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"Q63347"	"26S proteasome regulatory subunit 7 OS=Rattus norvegicus OX=10116 GN=Psmc2 PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"549.98163"	"1647.93033"	"1647.92674"	"2.18"	"0.00120"	"11/108"	"11"	"108"	"826006.890808105"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"64.8075"	"21331"	"21331"	"21311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"24.3"	""	"23.2"	""	"30.6"	""	"39.0"	"37.5"	""	"1179"	"32"	"37.000"	"30.000"	"0.0410661330068298"	"20"	"0"	"5.911E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDGLTSINAGK"	"[K].dVDGLTSINAGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"824.47021"	"1647.93315"	"1647.93177"	"0.84"	"0.00069"	"10/106"	"10"	"106"	"195394.729248047"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"83.2920"	"28825"	"28825"	"28805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"17.7"	""	"25.8"	""	"35.1"	""	"33.3"	"40.7"	""	"1144"	"20"	"37.000"	"30.000"	"0.634447994330093"	"14"	"0.004234"	"0.04938"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDGLTSINAGK"	"[K].dVDGLTSINAGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"P27653"	"C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Mthfd1 PE=1 SV=3"	"0"	"2"	"2"	"0.8837"	"0.0000"	"1"	"1"	"1"	"824.47040"	"1647.93352"	"1647.93177"	"1.06"	"0.00087"	"12/106"	"12"	"106"	"166455.073364258"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"83.1689"	"28804"	"28804"	"28780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"14.5"	""	"20.0"	""	"31.8"	""	"28.4"	"28.3"	""	"1135"	"43"	"37.000"	"30.000"	"0.00311864445914202"	"20"	"0"	"8.996E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFWLISAPGEK"	"[M].tEFWLISAPGEk.[T]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.94257"	"1648.87786"	"1648.87839"	"-0.32"	"-0.00027"	"5/108"	"5"	"108"	"147422.338378906"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"115.8137"	"41779"	"41779"	"41771"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	""	""	"3.3"	""	"3.1"	""	"4.9"	""	"3.4"	"6.2"	""	"1110"	"17"	"37.000"	"30.000"	"1.10992333764617"	"14"	"0.003904"	"0.04249"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEFWLISAPGEK"	"[M].tEFWLISAPGEk.[T]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"Q5FVI6"	"V-type proton ATPase subunit C 1 OS=Rattus norvegicus OX=10116 GN=Atp6v1c1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"824.94281"	"1648.87834"	"1648.87839"	"-0.03"	"-0.00002"	"7/108"	"7"	"108"	"102982.048034668"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"115.7348"	"41750"	"41750"	"41747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.5"	""	"3.2"	""	"6.0"	""	"5.6"	""	"9.5"	"5.5"	""	"1107"	"16"	"37.000"	"30.000"	"1.54923616041762"	"13"	"0.002525"	"0.02384"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"550.30408"	"1648.89768"	"1648.89803"	"-0.21"	"-0.00012"	"11/94"	"11"	"94"	"1849032.65222168"	"HCD"	"MS2"	"3.3736"	"55.6"	"100.000"	"74.4070"	"25227"	"25227"	"25208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.3"	""	"53.6"	""	"63.1"	""	"79.6"	""	"112.0"	"132.1"	""	"1154"	"42"	"37.000"	"30.000"	"0.00364062387765072"	""	"0"	"0.0003823"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7234"	"0.0000"	"1"	"1"	"1"	"550.30426"	"1648.89823"	"1648.89803"	"0.12"	"0.00007"	"12/94"	"12"	"94"	"1690717.14080811"	"HCD"	"MS2"	"3.054864"	"50.6"	"100.000"	"74.5004"	"25295"	"25295"	"25277"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.9"	""	"53.4"	""	"57.4"	""	"60.6"	""	"111.9"	"115.7"	""	"1160"	"47"	"37.000"	"30.000"	"0.00123148178796013"	"28"	"0"	"8.41E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"824.95282"	"1648.89836"	"1648.89803"	"0.20"	"0.00017"	"9/94"	"9"	"94"	"891528.075744629"	"HCD"	"MS2"	"0"	"73.1"	"100.000"	"74.3196"	"25192"	"25192"	"25171"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.8"	""	"70.6"	""	"76.9"	""	"90.4"	"1.3"	"158.8"	"178.9"	""	"1145"	"59"	"37.000"	"30.000"	"7.0595251702355E-05"	"29"	"0"	"1.945E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"824.95313"	"1648.89897"	"1648.89803"	"0.57"	"0.00047"	"9/94"	"9"	"94"	"766484.313903809"	"HCD"	"MS2"	"0"	"66.0"	"100.000"	"74.4611"	"25279"	"25279"	"25261"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.0"	""	"67.9"	""	"76.5"	""	"87.0"	"0.9"	"135.3"	"148.2"	""	"1146"	"59"	"37.000"	"30.000"	"6.59408622865161E-05"	"29"	"0"	"2.921E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"824.95319"	"1648.89910"	"1648.89803"	"0.65"	"0.00053"	"8/94"	"8"	"94"	"289743.591430664"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"74.7379"	"25391"	"25391"	"25379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.6"	""	"27.6"	""	"23.7"	""	"28.9"	""	"52.8"	"63.7"	""	"1146"	"48"	"37.000"	"30.000"	"0.0008692698605542"	"27"	"0"	"0.0001421"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQMVQEDLEk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7255"	"0.0000"	"1"	"1"	"1"	"824.95331"	"1648.89934"	"1648.89803"	"0.80"	"0.00066"	"8/94"	"8"	"94"	"231165.20324707"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"74.6307"	"25317"	"25317"	"25298"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.2"	""	"21.8"	""	"33.5"	""	"29.4"	""	"48.2"	"53.1"	""	"1141"	"51"	"37.000"	"30.000"	"0.000459468400704067"	"30"	"0"	"0.000196"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7164"	"0.0000"	"1"	"1"	"1"	"824.96112"	"1648.91496"	"1648.91579"	"-0.50"	"-0.00041"	"16/102"	"16"	"102"	"333195.47253418"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"58.9451"	"18987"	"18987"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.5"	""	"26.1"	""	"32.4"	""	"57.8"	"0.5"	"64.5"	"62.7"	""	"1141"	"67"	"37.000"	"30.000"	"1.06722416107869E-05"	""	"0"	"9.884E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7097"	"0.0000"	"1"	"1"	"1"	"824.96130"	"1648.91533"	"1648.91579"	"-0.28"	"-0.00023"	"9/102"	"9"	"102"	"289248.173034668"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"58.6527"	"18869"	"18869"	"18839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.4"	""	"21.6"	""	"25.6"	""	"46.9"	""	"45.2"	"52.2"	""	"1144"	"62"	"37.000"	"30.000"	"3.33730599644582E-05"	""	"0"	"4.071E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"824.96143"	"1648.91557"	"1648.91579"	"-0.13"	"-0.00011"	"9/102"	"9"	"102"	"273314.20098877"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"59.2123"	"19061"	"19061"	"19038"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"17.5"	""	"25.8"	""	"41.8"	""	"51.7"	"48.6"	""	"1151"	"60"	"37.000"	"30.000"	"6.44236501935347E-05"	""	"0"	"9.186E-06"	"0.867"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.6071"	"0.0000"	"1"	"1"	"1"	"550.31006"	"1648.91562"	"1648.91579"	"-0.10"	"-0.00005"	"11/102"	"11"	"102"	"1362528.5737915"	"HCD"	"MS2"	"34.44509"	"44.0"	"100.000"	"58.9567"	"18992"	"18992"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.3"	""	"50.1"	""	"64.5"	""	"70.8"	""	"81.3"	"84.7"	""	"1151"	"28"	"37.000"	"30.000"	"0.0893398724230878"	"25"	"0.0001991"	"0.003626"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"824.96167"	"1648.91606"	"1648.91579"	"0.17"	"0.00014"	"9/102"	"9"	"102"	"290294.423706055"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"58.8923"	"18931"	"18931"	"18901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.5"	""	"29.4"	""	"27.3"	""	"46.7"	""	"44.6"	"45.8"	""	"1151"	"62"	"37.000"	"30.000"	"3.94498474323507E-05"	""	"0"	"3.831E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGDHPVELLAR"	"[R].lEAGDHPVELLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"550.31171"	"1648.92057"	"1648.92199"	"-0.86"	"-0.00047"	"14/110"	"14"	"110"	"737025.845031738"	"HCD"	"MS2"	"18.42804"	"22.1"	"100.000"	"76.3687"	"26023"	"26023"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.9"	""	"23.2"	""	"28.5"	""	"50.2"	"0.4"	"38.4"	"42.2"	""	"1171"	"31"	"37.000"	"30.000"	"0.050877633134713"	"22"	"0"	"1.375E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDATEQTDLAK"	"[K].vDATEQTDLAk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"P38659"	"Protein disulfide-isomerase A4 OS=Rattus norvegicus OX=10116 GN=Pdia4 PE=1 SV=2"	"0"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"550.31177"	"1648.92075"	"1648.91579"	"3.01"	"0.00165"	"6/102"	"6"	"102"	"1897839.16821289"	"HCD"	"MS2"	"35.79532"	"62.9"	"100.000"	"59.0557"	"18997"	"18997"	"18980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.4"	""	"87.6"	""	"82.1"	""	"99.8"	"1.8"	"107.4"	"113.6"	""	"1166"	"24"	"37.000"	"30.000"	"0.244156648463746"	"30"	"0.0005161"	"0.006776"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGDHPVELLAR"	"[R].lEAGDHPVELLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"550.31177"	"1648.92075"	"1648.92199"	"-0.75"	"-0.00041"	"10/110"	"10"	"110"	"2297107.22937012"	"HCD"	"MS2"	"29.72248"	"56.0"	"100.000"	"76.0642"	"25899"	"25899"	"25877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.4"	""	"54.4"	""	"60.2"	""	"153.7"	"0.1"	"107.3"	"99.5"	""	"1166"	"45"	"37.000"	"30.000"	"0.00170871076198094"	"24"	"0"	"5.422E-06"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAGDHPVELLAR"	"[R].lEAGDHPVELLAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"P16975"	"SPARC OS=Rattus norvegicus OX=10116 GN=Sparc PE=1 SV=4"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"550.31213"	"1648.92185"	"1648.92199"	"-0.08"	"-0.00005"	"14/110"	"14"	"110"	"1886038.49639893"	"HCD"	"MS2"	"38.20801"	"51.4"	"100.000"	"76.0766"	"25936"	"25936"	"25913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.8"	""	"54.2"	""	"49.5"	""	"150.7"	""	"100.2"	"85.4"	""	"1163"	"30"	"37.000"	"30.000"	"0.0606107585192207"	"23"	"0"	"2.387E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPSAEYPDLR"	"[R].lYPPSAEYPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"825.43951"	"1649.87175"	"1649.87364"	"-1.14"	"-0.00094"	"8/98"	"8"	"98"	"230482.847900391"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"99.1186"	"35236"	"35236"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"7.6"	""	"12.0"	""	"11.7"	""	"20.7"	"18.3"	""	"1019"	"38"	"37.000"	"30.000"	"0.00875274323256792"	"22"	"0.0001991"	"0.004907"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPSAEYPDLR"	"[R].lYPPSAEYPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"825.43988"	"1649.87248"	"1649.87364"	"-0.70"	"-0.00058"	"7/98"	"7"	"98"	"157628.153808594"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"99.4130"	"35325"	"35325"	"35306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.5"	""	"1.5"	""	"7.6"	""	"7.5"	""	"12.9"	"12.9"	""	"1012"	"21"	"37.000"	"30.000"	"0.359046350589475"	"16"	"0.001718"	"0.0151"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPSAEYPDLR"	"[R].lYPPSAEYPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.44025"	"1649.87322"	"1649.87364"	"-0.26"	"-0.00021"	"5/98"	"5"	"98"	"127259.180114746"	"HCD"	"MS2"	"19.06382"	"5.6"	"100.000"	"98.8181"	"35115"	"35115"	"35094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.8"	""	"7.5"	""	"7.3"	""	"9.3"	""	"10.5"	"11.4"	""	"1074"	"9"	"37.000"	"30.000"	"6.13725665782108"	"13"	"0.004234"	"0.04962"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPSAEYPDLR"	"[R].lYPPSAEYPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"825.44086"	"1649.87444"	"1649.87364"	"0.48"	"0.00040"	"4/98"	"4"	"98"	"145004.778991699"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"98.7966"	"35077"	"35077"	"35050"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"7.2"	""	"11.3"	""	"5.6"	""	"12.1"	"14.9"	""	"1054"	"15"	"37.000"	"30.000"	"1.64744382647432"	"13"	"0.002755"	"0.02925"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPSAEYPDLR"	"[R].lYPPSAEYPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"825.44098"	"1649.87468"	"1649.87364"	"0.63"	"0.00052"	"8/98"	"8"	"98"	"229623.320800781"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"99.1085"	"35202"	"35202"	"35183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"6.8"	""	"12.1"	""	"16.0"	""	"22.4"	"18.2"	""	"1054"	"38"	"37.000"	"30.000"	"0.0075824685074083"	"18"	"0.0001991"	"0.003585"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LYPPSAEYPDLR"	"[R].lYPPSAEYPDLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"P25809"	"Creatine kinase U-type, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ckmt1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"825.44147"	"1649.87566"	"1649.87364"	"1.22"	"0.00101"	"5/98"	"5"	"98"	"143599.848022461"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"99.4326"	"35362"	"35362"	"35343"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.2"	""	"5.6"	""	"6.6"	""	"10.7"	""	"18.3"	"12.4"	""	"1062"	"12"	"37.000"	"30.000"	"3.63157084706439"	"19"	"0.003904"	"0.04276"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HALLDVTPNAVDR"	"[K].hALLDVTPNAVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"550.64313"	"1649.91483"	"1649.91723"	"-1.46"	"-0.00080"	"11/118"	"11"	"118"	"1104793.80841064"	"HCD"	"MS2"	"33.12775"	"20.5"	"100.000"	"61.3670"	"19970"	"19970"	"19946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.5"	""	"26.0"	""	"29.3"	""	"34.1"	""	"41.5"	"37.2"	""	"1040"	"52"	"37.000"	"30.000"	"0.00036728512821674"	"24"	"0"	"4.201E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HALLDVTPNAVDR"	"[K].hALLDVTPNAVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"550.64386"	"1649.91703"	"1649.91723"	"-0.13"	"-0.00007"	"8/118"	"8"	"118"	"3160442.38098145"	"HCD"	"MS2"	"13.77366"	"38.4"	"100.000"	"61.7843"	"20104"	"20104"	"20084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.7"	""	"53.1"	""	"49.6"	""	"63.5"	"1.6"	"69.4"	"69.4"	""	"1044"	"50"	"37.000"	"30.000"	"0.000473882316753012"	"22"	"0"	"3.223E-07"	"1.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HALLDVTPNAVDR"	"[K].hALLDVTPNAVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"550.64392"	"1649.91721"	"1649.91723"	"-0.02"	"-0.00001"	"13/118"	"13"	"118"	"1738245.54925537"	"HCD"	"MS2"	"11.49216"	"29.4"	"100.000"	"61.4728"	"19982"	"19982"	"19957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"39.4"	""	"35.9"	""	"41.1"	"0.7"	"55.5"	"56.2"	""	"1030"	"46"	"37.000"	"30.000"	"0.00127587235968114"	"23"	"0"	"2.719E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HALLDVTPNAVDR"	"[K].hALLDVTPNAVDR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.8367"	"0.0000"	"1"	"1"	"1"	"550.64392"	"1649.91721"	"1649.91723"	"-0.02"	"-0.00001"	"10/118"	"10"	"118"	"3976536.78167725"	"HCD"	"MS2"	"11.39665"	"42.4"	"100.000"	"61.6689"	"20090"	"20090"	"20070"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.8"	""	"63.4"	""	"46.2"	""	"62.2"	"2.4"	"78.8"	"83.6"	""	"1030"	"49"	"37.000"	"30.000"	"0.000669587332687145"	"23"	"0"	"8.11E-07"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYEGERPLTK"	"[K].vYEGERPLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.65900"	"1649.96244"	"1649.96268"	"-0.15"	"-0.00008"	"5/92"	"5"	"92"	"8708475.1505127"	"HCD"	"MS2"	"8.77593"	"355.9"	"100.000"	"47.6461"	"14362"	"14362"	"14345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"532.5"	""	"395.4"	""	"477.4"	""	"620.4"	""	"652.7"	"695.0"	""	"881"	"17"	"36.000"	"29.000"	"0.926714402717133"	"14"	"9.9E-05"	"0.0004516"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYEGERPLTK"	"[K].vYEGERPLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.65918"	"1649.96299"	"1649.96268"	"0.19"	"0.00010"	"7/92"	"7"	"92"	"13318758.8112793"	"HCD"	"MS2"	"21.06112"	"503.4"	"100.000"	"47.3586"	"14244"	"14244"	"14226"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"793.0"	""	"613.1"	""	"644.0"	""	"887.0"	""	"908.2"	"925.0"	""	"846"	"11"	"36.000"	"29.000"	"3.76132072853912"	"13"	"0.0001686"	"0.001655"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYEGERPLTK"	"[K].vYEGERPLTk.[D]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.65936"	"1649.96354"	"1649.96268"	"0.52"	"0.00029"	"9/92"	"9"	"92"	"15243110.8851318"	"HCD"	"MS2"	"24.81278"	"561.5"	"100.000"	"46.9903"	"14132"	"14132"	"14113"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"853.6"	""	"670.5"	""	"725.6"	""	"1015.6"	""	"1008.2"	"1048.4"	""	"842"	"14"	"36.000"	"29.000"	"1.66066524173692"	"13"	"0.0001991"	"0.002918"	"0.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"825.91913"	"1650.83098"	"1650.83250"	"-0.92"	"-0.00076"	"11/104"	"11"	"104"	"376026.28338623"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"106.5937"	"38210"	"38210"	"38190"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"21.3"	""	"18.5"	""	"29.9"	""	"27.6"	"23.4"	""	"833"	"28"	"36.000"	"29.000"	"0.070083374643585"	"16"	"9.9E-05"	"0.000441"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9394"	"0.0000"	"1"	"1"	"1"	"825.91925"	"1650.83122"	"1650.83250"	"-0.77"	"-0.00064"	"7/104"	"7"	"104"	"249552.333312988"	"HCD"	"MS2"	"12.07203"	"10.9"	"100.000"	"106.8510"	"38331"	"38331"	"38314"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"16.1"	""	"18.0"	""	"14.6"	""	"18.3"	"15.6"	""	"833"	"33"	"36.000"	"29.000"	"0.022367374318821"	"16"	"0"	"0.0003741"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"550.94867"	"1650.83146"	"1650.83250"	"-0.63"	"-0.00035"	"9/104"	"9"	"104"	"185994.571594238"	"HCD"	"MS2"	"25.85526"	"6.1"	"100.000"	"107.0002"	"38373"	"38373"	"38358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"6.1"	""	"8.0"	""	"9.3"	""	"12.5"	"10.9"	""	"830"	"11"	"36.000"	"29.000"	"3.22885168681519"	"16"	"0.0001991"	"0.002952"	"0.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"550.94879"	"1650.83182"	"1650.83250"	"-0.41"	"-0.00023"	"11/104"	"11"	"104"	"588371.654052734"	"HCD"	"MS2"	"38.13449"	"10.0"	"100.000"	"106.9415"	"38366"	"38366"	"38356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"17.6"	""	"16.3"	""	"16.8"	""	"14.8"	"15.0"	""	"838"	"28"	"36.000"	"29.000"	"0.0634182163094772"	"16"	"0"	"0.0001054"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"550.94897"	"1650.83237"	"1650.83250"	"-0.08"	"-0.00004"	"9/104"	"9"	"104"	"246976.469421387"	"HCD"	"MS2"	"5.857217"	"7.1"	"100.000"	"107.2354"	"38483"	"38483"	"38468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.7"	""	"10.8"	""	"10.3"	""	"8.7"	""	"12.4"	"15.6"	""	"854"	"21"	"36.000"	"29.000"	"0.339178156227268"	"17"	"0.0001991"	"0.005743"	"0.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"825.92004"	"1650.83281"	"1650.83250"	"0.19"	"0.00015"	"13/104"	"13"	"104"	"716065.532043457"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"107.1473"	"38448"	"38448"	"38436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"45.6"	""	"44.0"	""	"52.0"	"0.8"	"59.2"	"48.6"	""	"857"	"30"	"36.000"	"29.000"	"0.0438481047192303"	"16"	"0"	"0.0002412"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"550.94922"	"1650.83310"	"1650.83250"	"0.36"	"0.00020"	"14/104"	"14"	"104"	"683999.249023438"	"HCD"	"MS2"	"10.82573"	"11.3"	"100.000"	"106.7137"	"38258"	"38258"	"38239"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"11.9"	""	"19.8"	""	"16.2"	""	"20.6"	"23.3"	""	"858"	"28"	"36.000"	"29.000"	"0.0700579285646669"	"15"	"0"	"4.327E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASEDFVDPWTVR"	"[K].aSEDFVDPWTVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"Q6P7B0"	"Tryptophan--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Wars PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"825.92053"	"1650.83379"	"1650.83250"	"0.78"	"0.00064"	"13/104"	"13"	"104"	"550592.33416748"	"HCD"	"MS2"	"10.08318"	"23.4"	"100.000"	"106.8962"	"38331"	"38331"	"38320"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"32.5"	""	"35.0"	""	"36.3"	""	"40.9"	"38.0"	""	"846"	"31"	"36.000"	"29.000"	"0.0315021624962233"	"15"	"0"	"9.761E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8406"	"0.0000"	"1"	"1"	"1"	"550.97461"	"1650.90927"	"1650.91031"	"-0.63"	"-0.00034"	"9/104"	"9"	"104"	"3895935.00305176"	"HCD"	"MS2"	"4.877291"	"104.3"	"100.000"	"96.2649"	"34052"	"34052"	"34037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.6"	""	"125.9"	""	"137.8"	""	"176.9"	"0.2"	"175.3"	"197.3"	""	"1016"	"69"	"37.000"	"30.000"	"5.76585494361536E-06"	"28"	"0"	"1.654E-06"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8269"	"0.0000"	"1"	"1"	"1"	"550.97461"	"1650.90927"	"1650.91031"	"-0.63"	"-0.00034"	"13/104"	"13"	"104"	"4810674.98669434"	"HCD"	"MS2"	"4.414653"	"129.6"	"100.000"	"96.2647"	"34085"	"34085"	"34073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.7"	""	"153.1"	""	"175.8"	""	"209.0"	"2.4"	"221.4"	"244.0"	""	"1016"	"52"	"37.000"	"30.000"	"0.000297758187573127"	"25"	"0"	"2.093E-05"	"0.794"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"825.95844"	"1650.90959"	"1650.91031"	"-0.43"	"-0.00036"	"20/104"	"20"	"104"	"1402612.96850586"	"HCD"	"MS2"	"0"	"128.8"	"100.000"	"96.2672"	"34053"	"34053"	"34037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"221.1"	""	"141.8"	""	"164.6"	""	"228.4"	""	"221.0"	"244.3"	""	"1022"	"77"	"37.000"	"30.000"	"1.0195790429491E-06"	"24"	"0"	"2.55E-07"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.9079"	"0.0000"	"1"	"1"	"1"	"825.95850"	"1650.90972"	"1650.91031"	"-0.36"	"-0.00030"	"10/104"	"10"	"104"	"396258.904174805"	"HCD"	"MS2"	"0"	"37.3"	"100.000"	"95.9854"	"33940"	"33940"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.1"	""	"46.5"	""	"50.6"	""	"58.5"	"1.6"	"60.1"	"67.1"	""	"1029"	"76"	"37.000"	"30.000"	"1.26004303792912E-06"	"24"	"0"	"3.375E-07"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"825.95874"	"1650.91020"	"1650.91031"	"-0.06"	"-0.00005"	"20/104"	"20"	"104"	"1392627.1295166"	"HCD"	"MS2"	"0"	"124.5"	"100.000"	"96.3083"	"34102"	"34102"	"34084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"204.4"	""	"138.7"	""	"159.8"	""	"226.8"	"0.4"	"203.6"	"245.2"	""	"1024"	"80"	"37.000"	"30.000"	"5.3860447939749E-07"	"27"	"0"	"2.751E-07"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"550.97504"	"1650.91056"	"1650.91031"	"0.15"	"0.00008"	"14/104"	"14"	"104"	"1317521.03979492"	"HCD"	"MS2"	"19.96459"	"38.9"	"100.000"	"95.9785"	"33937"	"33937"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.0"	""	"41.5"	""	"62.5"	""	"65.6"	""	"67.3"	"70.6"	""	"1028"	"45"	"37.000"	"30.000"	"0.00161422146865238"	"19"	"0"	"3.475E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"2"	"2"	"0.8710"	"0.0000"	"1"	"1"	"1"	"825.95929"	"1650.91130"	"1650.91031"	"0.60"	"0.00050"	"10/104"	"10"	"104"	"300146.568237305"	"HCD"	"MS2"	"0"	"29.2"	"100.000"	"96.0037"	"33979"	"33979"	"33963"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"34.6"	""	"42.1"	""	"49.0"	""	"43.2"	"55.1"	""	"1021"	"62"	"37.000"	"30.000"	"3.53179710654117E-05"	"24"	"0"	"2.418E-06"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"550.97540"	"1650.91166"	"1650.91031"	"0.82"	"0.00045"	"7/104"	"7"	"104"	"340257.753601074"	"HCD"	"MS2"	"16.67811"	"11.5"	"100.000"	"96.7449"	"34278"	"34278"	"34247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"14.3"	""	"17.0"	""	"19.9"	""	"21.1"	"22.8"	""	"1018"	"8"	"37.000"	"30.000"	"8.40848555298569"	"14"	"0.008327"	"0.1064"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGQAVDDFIEK"	"[K].aGQAVDDFIEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"P85968"	"6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus OX=10116 GN=Pgd PE=1 SV=1"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"550.97583"	"1650.91294"	"1650.91031"	"1.59"	"0.00088"	"10/104"	"10"	"104"	"554766.356811523"	"HCD"	"MS2"	"6.442139"	"21.0"	"100.000"	"95.9804"	"33970"	"33970"	"33947"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.0"	""	"24.6"	""	"23.9"	""	"41.7"	""	"34.1"	"40.4"	""	"1004"	"37"	"37.000"	"30.000"	"0.0105609677676277"	"18"	"0"	"0.0001327"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVYPEVEESK"	"[K].lVYPEVEESk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"Q62773"	"Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus OX=10116 GN=Slc28a2 PE=1 SV=1"	"Q62674; Q62773"	"Sodium/nucleoside cotransporter 1 OS=Rattus norvegicus OX=10116 GN=Slc28a1 PE=1 SV=1; Sodium/nucleoside cotransporter 2 OS=Rattus norvegicus OX=10116 GN=Slc28a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"825.97131"	"1650.93535"	"1650.93546"	"-0.07"	"-0.00005"	"3/80"	"3"	"80"	"111406.765991211"	"HCD"	"MS2"	"40.88622"	"8.6"	"100.000"	"90.0020"	"31521"	"31521"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"6.9"	""	"9.1"	""	"15.7"	""	"25.8"	"16.1"	""	"938"	"6"	"36.000"	"29.000"	"11.4861066042519"	"13"	"0.008135"	"0.104"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDKDTIEK"	"[R].dDkDTIEk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K8(TMT6plex)"	"1"	"1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"Q6RUV5"	"Ras-related C3 botulinum toxin substrate 1 OS=Rattus norvegicus OX=10116 GN=Rac1 PE=1 SV=1"	"1"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"550.98846"	"1650.95084"	"1650.95173"	"-0.54"	"-0.00030"	"8/78"	"8"	"78"	"9262476.96777344"	"HCD"	"MS2"	"6.080066"	"519.5"	"100.000"	"40.7041"	"11582"	"11582"	"11563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"725.3"	""	"347.3"	""	"405.7"	""	"1020.7"	""	"1287.9"	"1161.3"	""	"829"	"9"	"36.000"	"29.000"	"5.19427017013217"	"14"	"0.006305"	"0.07826"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MFGSNLDLLDPGQ"	"[K].mFGSNLDLLDPGQ.[-]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"826.41321"	"1651.81914"	"1651.81989"	"-0.45"	"-0.00037"	"6/124"	"6"	"124"	"78066.0762939453"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"113.7804"	"41050"	"41050"	"41023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.1"	""	"3.4"	""	"3.6"	""	"6.1"	""	"4.6"	"5.5"	""	"731"	"9"	"35.000"	"28.000"	"4.98755136423252"	"14"	"0.006343"	"0.07893"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGDDMEISVK"	"[K].lAGDDmEISVk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"826.45313"	"1651.89897"	"1651.89769"	"0.77"	"0.00064"	"5/90"	"5"	"90"	"116181.50390625"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"76.2580"	"25978"	"25978"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"8.8"	""	"10.1"	""	"21.6"	""	"13.0"	"14.3"	""	"1032"	"15"	"37.000"	"30.000"	"1.61305695343596"	"15"	"0.008718"	"0.1103"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAGDDMEISVK"	"[K].lAGDDmEISVk.[E]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"P97571"	"Calpain-1 catalytic subunit OS=Rattus norvegicus OX=10116 GN=Capn1 PE=1 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"826.45398"	"1651.90068"	"1651.89769"	"1.81"	"0.00149"	"5/90"	"5"	"90"	"115366.08581543"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"76.3327"	"26040"	"26040"	"26014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"12.4"	""	"9.4"	""	"22.3"	""	"18.3"	"21.4"	""	"1046"	"23"	"37.000"	"30.000"	"0.235777136475184"	"20"	"0.004234"	"0.04801"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"551.31500"	"1651.93045"	"1651.93071"	"-0.15"	"-0.00008"	"11/94"	"11"	"94"	"911092.984130859"	"HCD"	"MS2"	"16.76899"	"28.4"	"100.000"	"101.4549"	"36154"	"36154"	"36135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.8"	""	"33.6"	""	"32.4"	""	"49.3"	""	"58.8"	"64.0"	""	"974"	"44"	"36.000"	"29.000"	"0.00177635172152771"	"24"	"0"	"0.000358"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"551.31500"	"1651.93045"	"1651.93071"	"-0.15"	"-0.00008"	"12/94"	"12"	"94"	"942925.174377441"	"HCD"	"MS2"	"18.38196"	"28.3"	"100.000"	"101.6091"	"36242"	"36242"	"36224"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.0"	""	"32.9"	""	"38.0"	""	"43.6"	"2.1"	"58.7"	"60.2"	""	"974"	"46"	"36.000"	"29.000"	"0.00114690900125736"	"26"	"0.0001686"	"0.001036"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"826.46906"	"1651.93083"	"1651.93071"	"0.08"	"0.00006"	"9/94"	"9"	"94"	"1889858.79119873"	"HCD"	"MS2"	"46.94743"	"124.8"	"100.000"	"101.3760"	"36148"	"36148"	"36136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.7"	""	"166.8"	""	"151.7"	""	"205.1"	"0.0"	"257.7"	"233.7"	""	"952"	"38"	"36.000"	"29.000"	"0.00707305365728615"	"18"	"0"	"2.889E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"551.31525"	"1651.93119"	"1651.93071"	"0.29"	"0.00016"	"11/94"	"11"	"94"	"1715873.80657959"	"HCD"	"MS2"	"43.99725"	"44.8"	"100.000"	"101.3162"	"36124"	"36124"	"36108"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.8"	""	"63.6"	""	"54.1"	""	"80.4"	""	"95.0"	"83.2"	""	"958"	"43"	"36.000"	"29.000"	"0.00224561610047582"	"24"	"9.9E-05"	"0.0005726"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"826.46924"	"1651.93120"	"1651.93071"	"0.30"	"0.00025"	"9/94"	"9"	"94"	"2129677.04351807"	"HCD"	"MS2"	"44.45592"	"136.6"	"100.000"	"101.2447"	"36069"	"36069"	"36052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.7"	""	"178.0"	""	"173.7"	""	"217.0"	"0.7"	"276.3"	"281.5"	""	"958"	"39"	"36.000"	"29.000"	"0.00644667109592799"	"18"	"0"	"8.518E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"826.46930"	"1651.93132"	"1651.93071"	"0.37"	"0.00031"	"12/94"	"12"	"94"	"256250.611572266"	"HCD"	"MS2"	"39.5155"	"16.4"	"100.000"	"101.6874"	"36274"	"36274"	"36256"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.5"	""	"16.8"	""	"22.7"	""	"25.1"	"1.5"	"37.4"	"28.9"	""	"958"	"26"	"36.000"	"29.000"	"0.12143266140085"	"16"	"0.0005161"	"0.006557"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYIALNEDLK"	"[R].dYIALNEDLk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P16391"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"P16391; P15978"	"RT1 class I histocompatibility antigen, AA alpha chain OS=Rattus norvegicus OX=10116 PE=1 SV=2; Class I histocompatibility antigen, Non-RT1.A alpha-1 chain OS=Rattus norvegicus OX=10116 GN=RT1-Aw2 PE=1 SV=1"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"551.31561"	"1651.93229"	"1651.93071"	"0.95"	"0.00053"	"10/94"	"10"	"94"	"1599124.6383667"	"HCD"	"MS2"	"49.64644"	"41.3"	"100.000"	"101.1409"	"36027"	"36027"	"36011"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"56.2"	""	"43.7"	""	"71.9"	""	"84.6"	"84.6"	""	"945"	"35"	"36.000"	"29.000"	"0.0158271170002074"	"24"	"0.0001991"	"0.002515"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8202"	"0.0000"	"1"	"1"	"1"	"826.92139"	"1652.83550"	"1652.83627"	"-0.47"	"-0.00038"	"11/118"	"11"	"118"	"596618.271484375"	"HCD"	"MS2"	"0"	"34.0"	"100.000"	"87.2102"	"30433"	"30433"	"30419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"36.9"	""	"39.8"	""	"39.2"	""	"87.4"	"79.6"	""	"883"	"89"	"36.000"	"29.000"	"6.1791780291581E-08"	""	"0"	"4.041E-09"	"1.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7843"	"0.0000"	"1"	"1"	"1"	"826.92145"	"1652.83562"	"1652.83627"	"-0.39"	"-0.00032"	"11/118"	"11"	"118"	"523730.963500977"	"HCD"	"MS2"	"0"	"33.5"	"100.000"	"87.2130"	"30400"	"30400"	"30391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"45.2"	""	"42.7"	""	"44.2"	"0.6"	"82.8"	"67.5"	""	"883"	"51"	"36.000"	"29.000"	"0.000367223704941829"	"27"	"0"	"1.114E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.7705"	"0.0000"	"1"	"1"	"1"	"551.61700"	"1652.83646"	"1652.83627"	"0.12"	"0.00006"	"14/118"	"14"	"118"	"895167.646057129"	"HCD"	"MS2"	"59.17083"	"14.3"	"100.000"	"87.1277"	"30366"	"30366"	"30346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"18.1"	""	"20.9"	""	"22.7"	""	"31.1"	"24.7"	""	"901"	"61"	"36.000"	"29.000"	"3.98744582228791E-05"	""	"0"	"2.743E-07"	"1.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"826.92188"	"1652.83647"	"1652.83627"	"0.13"	"0.00010"	"7/118"	"7"	"118"	"130851.017272949"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"86.9052"	"30311"	"30311"	"30288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.1"	""	"13.3"	""	"8.6"	""	"13.3"	""	"20.2"	"16.4"	""	"901"	"19"	"36.000"	"29.000"	"0.560653832603008"	"27"	"0.002922"	"0.03126"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"551.61713"	"1652.83683"	"1652.83627"	"0.34"	"0.00019"	"16/118"	"16"	"118"	"662553.04083252"	"HCD"	"MS2"	"51.03547"	"12.8"	"100.000"	"87.4368"	"30490"	"30490"	"30470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"17.5"	""	"20.3"	""	"24.3"	""	"19.0"	"25.0"	""	"901"	"48"	"36.000"	"29.000"	"0.000683431190540431"	"27"	"0"	"3.129E-06"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.7812"	"0.0000"	"1"	"1"	"1"	"551.61713"	"1652.83683"	"1652.83627"	"0.34"	"0.00019"	"14/118"	"14"	"118"	"1156968.13012695"	"HCD"	"MS2"	"52.87955"	"15.5"	"100.000"	"87.1476"	"30408"	"30408"	"30395"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.5"	""	"16.9"	""	"22.7"	""	"23.7"	""	"36.7"	"27.0"	""	"901"	"64"	"36.000"	"29.000"	"1.60581235608523E-05"	""	"0"	"5.238E-07"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"826.92212"	"1652.83696"	"1652.83627"	"0.42"	"0.00035"	"8/118"	"8"	"118"	"122234.509277344"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"87.5192"	"30558"	"30558"	"30539"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"9.3"	""	"9.2"	""	"12.3"	""	"20.9"	"21.8"	""	"900"	"12"	"36.000"	"29.000"	"2.83930805016087"	"16"	"0.004792"	"0.05637"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEMSSILEER.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"826.92255"	"1652.83782"	"1652.83627"	"0.94"	"0.00077"	"10/118"	"10"	"118"	"222708.802368164"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"87.4968"	"30514"	"30514"	"30497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"18.3"	""	"20.5"	""	"25.1"	"1.3"	"34.1"	"36.3"	""	"909"	"75"	"36.000"	"29.000"	"1.45724940798773E-06"	"26"	"0"	"3.525E-08"	"1.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKTEISEMNR"	"[R].skTEISEMNR.[N]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.63824"	"1652.90018"	"1652.90418"	"-2.42"	"-0.00133"	"16/100"	"16"	"100"	"4473383.75213623"	"HCD"	"MS2"	"26.98373"	"215.2"	"100.000"	"36.8213"	"9971"	"9971"	"9949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"432.4"	""	"257.2"	""	"305.3"	""	"274.1"	""	"354.7"	"413.2"	""	"1077"	"13"	"37.000"	"30.000"	"2.41649392478992"	"13"	"0.000264"	"0.00602"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SKTEISEMNR"	"[R].skTEISEMNR.[N]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.63885"	"1652.90201"	"1652.90418"	"-1.31"	"-0.00072"	"8/100"	"8"	"100"	"4459942.53417969"	"HCD"	"MS2"	"27.26749"	"217.6"	"100.000"	"36.7437"	"9977"	"9977"	"9949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"408.5"	""	"267.0"	""	"317.2"	""	"268.7"	""	"373.4"	"428.5"	""	"1068"	"12"	"37.000"	"30.000"	"3.30781534091001"	"13"	"0.004213"	"0.04744"	"0.1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELPIAELTGHTR"	"[R].sELPIAELTGHTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LTR1"	"WD repeat-containing protein 26 OS=Rattus norvegicus OX=10116 GN=Wdr26 PE=3 SV=2"	"F1LTR1"	"WD repeat-containing protein 26 OS=Rattus norvegicus OX=10116 GN=Wdr26 PE=3 SV=2"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"551.64331"	"1652.91538"	"1652.91690"	"-0.92"	"-0.00051"	"13/118"	"13"	"118"	"423664.037109375"	"HCD"	"MS2"	"30.80467"	"8.5"	"100.000"	"80.3955"	"27682"	"27682"	"27660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"10.6"	""	"12.6"	""	"11.6"	""	"17.4"	"17.4"	""	"978"	"48"	"36.000"	"29.000"	"0.000853707032778126"	"20"	"0"	"1.937E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELPIAELTGHTR"	"[R].sELPIAELTGHTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LTR1"	"WD repeat-containing protein 26 OS=Rattus norvegicus OX=10116 GN=Wdr26 PE=3 SV=2"	"F1LTR1"	"WD repeat-containing protein 26 OS=Rattus norvegicus OX=10116 GN=Wdr26 PE=3 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"551.64380"	"1652.91684"	"1652.91690"	"-0.03"	"-0.00002"	"12/118"	"12"	"118"	"367462.764770508"	"HCD"	"MS2"	"26.32186"	"11.9"	"100.000"	"80.6560"	"27761"	"27761"	"27736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.5"	""	"13.3"	""	"19.3"	""	"20.5"	""	"18.7"	"26.0"	""	"982"	"34"	"36.000"	"29.000"	"0.017663692356147"	"15"	"0"	"1.145E-05"	"0.847"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELPIAELTGHTR"	"[R].sELPIAELTGHTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LTR1"	"WD repeat-containing protein 26 OS=Rattus norvegicus OX=10116 GN=Wdr26 PE=3 SV=2"	"F1LTR1"	"WD repeat-containing protein 26 OS=Rattus norvegicus OX=10116 GN=Wdr26 PE=3 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"551.64386"	"1652.91703"	"1652.91690"	"0.08"	"0.00004"	"16/118"	"16"	"118"	"418161.406677246"	"HCD"	"MS2"	"30.68344"	"9.9"	"100.000"	"80.3335"	"27630"	"27630"	"27605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"12.0"	""	"15.5"	""	"14.2"	""	"20.3"	"18.1"	""	"974"	"46"	"36.000"	"29.000"	"0.00136939570440429"	"18"	"0"	"2.222E-06"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8525"	"0.0000"	"1"	"1"	"1"	"826.96600"	"1652.92473"	"1652.92596"	"-0.74"	"-0.00061"	"9/102"	"9"	"102"	"1153970.14263916"	"HCD"	"MS2"	"0"	"91.9"	"100.000"	"73.8036"	"24982"	"24982"	"24961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.5"	""	"98.3"	""	"111.3"	""	"168.8"	""	"163.6"	"196.9"	""	"928"	"61"	"36.000"	"29.000"	"3.33824325793716E-05"	"25"	"0"	"4.731E-07"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"551.64679"	"1652.92582"	"1652.92596"	"-0.09"	"-0.00005"	"9/102"	"9"	"102"	"1628023.43066406"	"HCD"	"MS2"	"27.42624"	"48.7"	"100.000"	"74.4243"	"25264"	"25264"	"25246"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.8"	""	"47.0"	""	"62.3"	""	"82.7"	""	"92.7"	"100.1"	""	"916"	"40"	"36.000"	"29.000"	"0.00509173131094969"	"22"	"0"	"0.000119"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"826.96667"	"1652.92607"	"1652.92596"	"0.07"	"0.00006"	"17/102"	"17"	"102"	"891858.351074219"	"HCD"	"MS2"	"0"	"78.4"	"100.000"	"74.3137"	"25219"	"25219"	"25201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.9"	""	"73.4"	""	"95.8"	""	"133.3"	""	"159.1"	"170.4"	""	"898"	"65"	"36.000"	"29.000"	"1.58214521098077E-05"	"28"	"0"	"8.03E-08"	"1.291"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.8308"	"0.0000"	"1"	"1"	"1"	"826.96674"	"1652.92620"	"1652.92596"	"0.14"	"0.00012"	"10/102"	"10"	"102"	"1707412.51342773"	"HCD"	"MS2"	"0"	"133.6"	"100.000"	"74.0189"	"25099"	"25099"	"25080"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.0"	""	"138.4"	""	"165.5"	""	"245.2"	""	"245.7"	"271.9"	""	"902"	"65"	"36.000"	"29.000"	"1.51766717788346E-05"	"28"	"0"	"5.285E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6591"	"0.0000"	"1"	"1"	"1"	"551.64703"	"1652.92655"	"1652.92596"	"0.36"	"0.00020"	"11/102"	"11"	"102"	"1480271.3470459"	"HCD"	"MS2"	"33.53535"	"42.8"	"100.000"	"73.6999"	"24940"	"24940"	"24918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.1"	""	"55.0"	""	"52.0"	""	"76.8"	"0.8"	"72.2"	"90.9"	""	"903"	"44"	"36.000"	"29.000"	"0.00160937686741949"	""	"0"	"9.451E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"2"	"2"	"0.7344"	"0.0000"	"1"	"1"	"1"	"826.96692"	"1652.92656"	"1652.92596"	"0.37"	"0.00030"	"9/102"	"9"	"102"	"1572780.2722168"	"HCD"	"MS2"	"0"	"126.4"	"100.000"	"74.0870"	"25098"	"25098"	"25081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"175.3"	""	"136.1"	""	"141.8"	""	"224.9"	"0.8"	"250.3"	"270.7"	""	"903"	"64"	"36.000"	"29.000"	"1.69300310513836E-05"	""	"0"	"2.069E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"551.64722"	"1652.92710"	"1652.92596"	"0.69"	"0.00038"	"9/102"	"9"	"102"	"6595706.16253662"	"HCD"	"MS2"	"9.935825"	"173.6"	"100.000"	"74.1251"	"25143"	"25143"	"25126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"239.1"	""	"185.3"	""	"203.3"	""	"314.0"	""	"350.1"	"358.1"	""	"904"	"53"	"36.000"	"29.000"	"0.000224977162410479"	"19"	"0"	"2.123E-06"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"551.64722"	"1652.92710"	"1652.92596"	"0.69"	"0.00038"	"9/102"	"9"	"102"	"6637068.72821045"	"HCD"	"MS2"	"9.660563"	"159.2"	"100.000"	"74.0154"	"25068"	"25068"	"25052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"223.3"	""	"176.6"	""	"189.8"	""	"293.5"	"1.0"	"302.6"	"323.1"	""	"904"	"56"	"36.000"	"29.000"	"0.00011698722376492"	"18"	"0"	"4.233E-06"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAAENSLVAYK"	"[K].eAAENSLVAYk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"551.64752"	"1652.92801"	"1652.92596"	"1.24"	"0.00069"	"11/102"	"11"	"102"	"1664244.23138428"	"HCD"	"MS2"	"30.87675"	"51.2"	"100.000"	"73.8393"	"25026"	"25026"	"25006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.2"	""	"56.2"	""	"58.9"	""	"97.6"	""	"94.1"	"98.4"	""	"897"	"42"	"36.000"	"29.000"	"0.00289575921722043"	"19"	"0"	"2.312E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"827.41602"	"1653.82475"	"1653.82814"	"-2.05"	"-0.00170"	"6/130"	"6"	"130"	"158246.901977539"	"HCD"	"MS2"	"32.43396"	"13.7"	"100.000"	"72.2801"	"24362"	"24362"	"24336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"11.9"	""	"17.5"	""	"27.6"	""	"29.7"	"28.8"	""	"809"	"28"	"36.000"	"29.000"	"0.0613646873637301"	"16"	"9.9E-05"	"0.000745"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYALAQSCPADR"	"[R].aLYALAQScPADR.[N]"	"N-Term(TMT6plex); C9(Methylthio)"	"1"	"1"	"Q6AY27"	"F-box only protein 17 OS=Rattus norvegicus OX=10116 GN=Fbxo17 PE=2 SV=1"	"Q6AY27"	"F-box only protein 17 OS=Rattus norvegicus OX=10116 GN=Fbxo17 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"827.41748"	"1653.82768"	"1653.82901"	"-0.80"	"-0.00066"	"4/116"	"4"	"116"	"126310.854858398"	"HCD"	"MS2"	"68.24979"	"6.8"	"100.000"	"72.6392"	"24508"	"24508"	"24480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"6.0"	""	"5.9"	""	"13.4"	""	"16.0"	"12.1"	""	"849"	"2"	"36.000"	"29.000"	"29.5037822816444"	"13"	"0.00307"	"0.03392"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"827.41760"	"1653.82793"	"1653.82814"	"-0.13"	"-0.00011"	"6/130"	"6"	"130"	"127353.475830078"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"72.5886"	"24487"	"24487"	"24464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"13.7"	""	"12.3"	""	"16.9"	""	"19.3"	"15.0"	""	"852"	"12"	"36.000"	"29.000"	"2.75048701568764"	"17"	"0.002875"	"0.03105"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"827.41760"	"1653.82793"	"1653.82814"	"-0.13"	"-0.00011"	"9/130"	"9"	"130"	"160944.127258301"	"HCD"	"MS2"	"36.29515"	"12.3"	"100.000"	"72.3671"	"24427"	"24427"	"24402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"13.1"	""	"13.6"	""	"22.8"	""	"26.6"	"21.5"	""	"852"	"6"	"36.000"	"29.000"	"10.4330094102586"	"17"	"0.002525"	"0.02502"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDALQEGDSGTYR"	"[R].lDALQEGDSGTYR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"Q6AYD4"	"Endothelial cell-selective adhesion molecule OS=Rattus norvegicus OX=10116 GN=Esam PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"827.41797"	"1653.82866"	"1653.82814"	"0.31"	"0.00026"	"6/130"	"6"	"130"	"149986.07043457"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"72.6614"	"24546"	"24546"	"24526"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.4"	""	"11.8"	""	"14.5"	""	"21.7"	""	"23.2"	"22.9"	""	"857"	"27"	"36.000"	"29.000"	"0.0776159229687499"	"23"	"9.9E-05"	"0.0004621"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEEVNDPAK"	"[R].fFEEVNDPAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"551.96704"	"1653.88657"	"1653.88884"	"-1.37"	"-0.00076"	"7/88"	"7"	"88"	"641140.801025391"	"HCD"	"MS2"	"40.7011"	"23.8"	"100.000"	"97.2296"	"34443"	"34443"	"34420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.6"	""	"28.0"	""	"36.2"	""	"41.8"	""	"42.2"	"41.6"	""	"1000"	"39"	"36.000"	"30.000"	"0.00630913767295335"	"22"	"0"	"0.0001235"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEEVNDPAK"	"[R].fFEEVNDPAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.44751"	"1653.88774"	"1653.88884"	"-0.67"	"-0.00055"	"6/88"	"6"	"88"	"136788.366149902"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"97.5505"	"34572"	"34572"	"34551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"14.9"	""	"11.5"	""	"21.1"	""	"27.1"	"20.9"	""	"990"	"30"	"36.000"	"29.000"	"0.0539020396200049"	"14"	"0.0001991"	"0.005628"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEEVNDPAK"	"[R].fFEEVNDPAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.44775"	"1653.88823"	"1653.88884"	"-0.37"	"-0.00031"	"4/88"	"4"	"88"	"175133.977416992"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"97.2387"	"34447"	"34447"	"34420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"15.9"	""	"16.9"	""	"30.0"	""	"29.8"	"24.5"	""	"1023"	"16"	"37.000"	"30.000"	"1.17990118703031"	"14"	"0.009781"	"0.1307"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEEVNDPAK"	"[R].fFEEVNDPAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"551.96771"	"1653.88858"	"1653.88884"	"-0.16"	"-0.00009"	"7/88"	"7"	"88"	"638067.925231934"	"HCD"	"MS2"	"18.73012"	"23.3"	"100.000"	"97.3221"	"34511"	"34511"	"34490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"36.9"	""	"35.8"	""	"41.4"	""	"42.8"	"36.1"	""	"1006"	"41"	"37.000"	"30.000"	"0.00395884032216635"	"22"	"0"	"0.0001035"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FFEEVNDPAK"	"[R].fFEEVNDPAk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.44830"	"1653.88933"	"1653.88884"	"0.29"	"0.00024"	"5/88"	"5"	"88"	"195994.657104492"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"97.3267"	"34513"	"34513"	"34490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"26.8"	""	"23.0"	""	"29.9"	""	"34.0"	"34.7"	""	"1009"	"15"	"37.000"	"30.000"	"1.45499389332737"	"13"	"0.004213"	"0.04774"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETTATYDPK"	"[R].gLETTATYDPk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07872"	"Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1"	"P07872"	"Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"827.45728"	"1653.90727"	"1653.90997"	"-1.63"	"-0.00135"	"4/92"	"4"	"92"	"125459.091918945"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"64.2826"	"21151"	"21151"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"11.9"	""	"10.7"	""	"19.7"	""	"14.9"	"19.3"	""	"989"	"15"	"36.000"	"29.000"	"1.51763137325943"	"22"	"0.00981"	"0.1323"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLETTATYDPK"	"[R].gLETTATYDPk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07872"	"Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1"	"P07872"	"Peroxisomal acyl-coenzyme A oxidase 1 OS=Rattus norvegicus OX=10116 GN=Acox1 PE=1 SV=1"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"827.45770"	"1653.90813"	"1653.90997"	"-1.12"	"-0.00092"	"6/92"	"6"	"92"	"131174.312133789"	"HCD"	"MS2"	"100"	"10.8"	"100.000"	"64.1693"	"21072"	"21072"	"21060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.0"	""	"15.1"	""	"15.4"	""	"18.7"	""	"19.7"	"19.4"	""	"984"	"27"	"36.000"	"29.000"	"0.0937486673237918"	"24"	"0.0001991"	"0.00304"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSESSDIMSK"	"[K].lVSESSDIMSk.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"551.97540"	"1653.91166"	"1653.91334"	"-1.02"	"-0.00056"	"6/94"	"6"	"94"	"548684.309875488"	"HCD"	"MS2"	"56.62399"	"23.7"	"100.000"	"89.7957"	"31477"	"31477"	"31460"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"24.1"	""	"34.1"	""	"40.0"	""	"45.7"	"50.7"	""	"1003"	"10"	"37.000"	"30.000"	"4.69105945584998"	"14"	"0.004819"	"0.05701"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVSESSDIMSK"	"[K].lVSESSDIMSk.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"551.97620"	"1653.91404"	"1653.91334"	"0.42"	"0.00023"	"6/94"	"6"	"94"	"473174.565673828"	"HCD"	"MS2"	"52.37795"	"17.5"	"100.000"	"89.7806"	"31431"	"31431"	"31407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"24.6"	""	"21.8"	""	"33.4"	""	"29.8"	"34.1"	""	"1002"	"12"	"36.000"	"30.000"	"3.37938541876659"	"17"	"0.001348"	"0.01136"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANNYNEAVYLVR"	"[K].aNNYNEAVYLVR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"Q56A27"	"Nuclear cap-binding protein subunit 1 OS=Rattus norvegicus OX=10116 GN=Ncbp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.94025"	"1654.87322"	"1654.87504"	"-1.10"	"-0.00091"	"7/108"	"7"	"108"	"156783.908935547"	"HCD"	"MS2"	"47.59795"	"12.8"	"100.000"	"80.6236"	"27775"	"27775"	"27748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"15.2"	""	"12.1"	""	"18.1"	""	"31.4"	"28.4"	""	"954"	"14"	"36.000"	"29.000"	"1.9298270033968"	"13"	"0.001718"	"0.01516"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDSEGNR"	"[R].gPGLYYVDSEGNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"828.41144"	"1655.81560"	"1655.82267"	"-4.27"	"-0.00353"	"5/102"	"5"	"102"	"163504.662475586"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"67.7030"	"22506"	"22506"	"22483"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"16.8"	""	"15.3"	""	"25.0"	""	"27.7"	"22.7"	""	"705"	"4"	"35.000"	"28.000"	"13.2177983291533"	"16"	"0.007443"	"0.0951"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.41345"	"1655.81963"	"1655.82267"	"-1.83"	"-0.00152"	"6/110"	"6"	"110"	"102405.004699707"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"68.2914"	"22777"	"22777"	"22746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"16.7"	""	"10.4"	""	"7.2"	""	"8.9"	"16.7"	""	"732"	"7"	"35.000"	"28.000"	"7.40425019396247"	"13"	"0.006814"	"0.08502"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GPGLYYVDSEGNR"	"[R].gPGLYYVDSEGNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"P28075"	"Proteasome subunit beta type-5 OS=Rattus norvegicus OX=10116 GN=Psmb5 PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"828.41345"	"1655.81963"	"1655.82267"	"-1.83"	"-0.00152"	"9/102"	"9"	"102"	"308349.165283203"	"HCD"	"MS2"	"35.49488"	"23.9"	"100.000"	"67.5635"	"22481"	"22481"	"22457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.1"	""	"32.4"	""	"37.7"	""	"37.6"	""	"41.0"	"41.0"	""	"732"	"19"	"35.000"	"28.000"	"0.480265163041028"	"14"	"0.001348"	"0.01121"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"828.41345"	"1655.81963"	"1655.82267"	"-1.83"	"-0.00152"	"6/110"	"6"	"110"	"308349.165283203"	"HCD"	"MS2"	"35.49488"	"23.9"	"100.000"	"67.5635"	"22481"	"22481"	"22457"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.1"	""	"32.4"	""	"37.7"	""	"37.6"	""	"41.0"	"41.0"	""	"732"	"19"	"35.000"	"28.000"	"0.504058665615184"	"14"	"0.001718"	"0.01519"	"0.204"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"828.41443"	"1655.82158"	"1655.82267"	"-0.66"	"-0.00054"	"5/110"	"5"	"110"	"141341.996582031"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"68.6337"	"22884"	"22884"	"22860"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"13.3"	""	"17.7"	""	"17.0"	""	"23.5"	"19.3"	""	"738"	"16"	"35.000"	"28.000"	"0.961670659949592"	"23"	"0.001488"	"0.01234"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGLYYVDDNGTR"	"[K].gPGLYYVDDNGTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"P28064"	"Proteasome subunit beta type-8 OS=Rattus norvegicus OX=10116 GN=Psmb8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.41492"	"1655.82256"	"1655.82267"	"-0.07"	"-0.00005"	"5/110"	"5"	"110"	"135738.485534668"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"68.3319"	"22761"	"22761"	"22732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"14.0"	""	"20.0"	""	"20.2"	""	"17.1"	"20.6"	""	"749"	"6"	"35.000"	"28.000"	"10.1263240735876"	"13"	"0.009781"	"0.1304"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"828.92761"	"1656.84795"	"1656.84810"	"-0.09"	"-0.00008"	"7/102"	"7"	"102"	"178230.589111328"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"43.3988"	"12675"	"12675"	"12651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"15.0"	""	"23.0"	""	"24.8"	""	"34.7"	"34.9"	""	"811"	"42"	"36.000"	"29.000"	"0.0024265590179696"	"18"	"0"	"0.0003122"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9434"	"0.0000"	"1"	"1"	"1"	"828.92767"	"1656.84807"	"1656.84810"	"-0.02"	"-0.00002"	"15/102"	"15"	"102"	"253387.915100098"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"43.5389"	"12698"	"12698"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"28.7"	""	"34.2"	""	"37.5"	"1.4"	"47.7"	"57.5"	""	"809"	"53"	"36.000"	"29.000"	"0.000224863272065878"	"18"	"0"	"1.16E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7843"	"0.0000"	"1"	"1"	"1"	"552.95422"	"1656.84812"	"1656.84810"	"0.01"	"0.00001"	"8/102"	"8"	"102"	"7455150.24017334"	"HCD"	"MS2"	"14.33908"	"220.6"	"100.000"	"43.0400"	"12528"	"12528"	"12507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"381.9"	""	"256.1"	""	"245.9"	""	"358.8"	"7.0"	"430.8"	"410.0"	""	"809"	"51"	"36.000"	"29.000"	"0.000289680009431118"	"27"	"0"	"1.896E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"552.95447"	"1656.84885"	"1656.84810"	"0.45"	"0.00025"	"8/102"	"8"	"102"	"7025165.88739014"	"HCD"	"MS2"	"17.18595"	"224.5"	"100.000"	"43.2174"	"12566"	"12566"	"12546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"384.0"	""	"254.6"	""	"258.3"	""	"358.0"	"8.0"	"429.4"	"436.1"	""	"812"	"53"	"36.000"	"29.000"	"0.000190777008093717"	"29"	"0"	"2.277E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"828.92816"	"1656.84905"	"1656.84810"	"0.57"	"0.00047"	"9/102"	"9"	"102"	"1777560.97637939"	"HCD"	"MS2"	"0"	"152.4"	"100.000"	"43.0238"	"12522"	"12522"	"12491"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.6"	""	"157.5"	""	"157.3"	""	"246.4"	"0.5"	"301.0"	"302.0"	""	"810"	"64"	"36.000"	"29.000"	"1.46708414358763E-05"	"23"	"0"	"6.195E-07"	"1.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSYVGDEAQSK"	"[K].dSYVGDEAQSk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"828.92841"	"1656.84953"	"1656.84810"	"0.87"	"0.00072"	"9/102"	"9"	"102"	"2075347.19702148"	"HCD"	"MS2"	"0"	"179.1"	"100.000"	"43.2195"	"12567"	"12567"	"12546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"332.0"	""	"176.3"	""	"176.5"	""	"298.4"	""	"352.3"	"363.0"	""	"803"	"60"	"36.000"	"29.000"	"3.66172352001398E-05"	"22"	"0"	"2.291E-06"	"0.991"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"552.98749"	"1656.94791"	"1656.94820"	"-0.18"	"-0.00010"	"16/118"	"16"	"118"	"1002576.33605957"	"HCD"	"MS2"	"36.55196"	"15.1"	"100.000"	"90.5806"	"31753"	"31753"	"31736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"23.1"	""	"23.8"	""	"20.9"	""	"29.5"	"24.6"	""	"817"	"61"	"36.000"	"29.000"	"3.59908464623774E-05"	"20"	"0"	"2.69E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"828.97772"	"1656.94817"	"1656.94820"	"-0.02"	"-0.00002"	"3/118"	"3"	"118"	"106803.50769043"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"90.9998"	"31960"	"31960"	"31940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.3"	""	"4.8"	""	"11.4"	""	"8.0"	""	"11.4"	"9.7"	""	"816"	"8"	"36.000"	"29.000"	"6.64752781317007"	"16"	"0.002189"	"0.02095"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"828.97772"	"1656.94817"	"1656.94820"	"-0.02"	"-0.00002"	"13/118"	"13"	"118"	"1189819.38848877"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"90.7954"	"31840"	"31840"	"31831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.8"	""	"53.0"	""	"59.5"	""	"69.3"	"1.7"	"80.7"	"69.0"	""	"816"	"70"	"36.000"	"29.000"	"3.68688985278699E-06"	"22"	"0"	"1.273E-06"	"1.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"552.98761"	"1656.94828"	"1656.94820"	"0.05"	"0.00003"	"18/118"	"18"	"118"	"2322587.79882813"	"HCD"	"MS2"	"8.727927"	"14.1"	"100.000"	"90.7251"	"31850"	"31850"	"31837"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"20.6"	""	"19.4"	""	"20.5"	""	"26.4"	"29.5"	""	"816"	"78"	"36.000"	"29.000"	"7.13937448958861E-07"	""	"0"	"1.17E-07"	"1.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"828.97778"	"1656.94829"	"1656.94820"	"0.05"	"0.00004"	"20/118"	"20"	"118"	"1012529.85583496"	"HCD"	"MS2"	"3.229393"	"43.0"	"100.000"	"90.6995"	"31839"	"31839"	"31828"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.3"	""	"57.9"	""	"61.1"	""	"72.6"	""	"77.2"	"65.2"	""	"816"	"42"	"36.000"	"29.000"	"0.00279035952090823"	"18"	"0"	"0.0001631"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"552.98767"	"1656.94846"	"1656.94820"	"0.16"	"0.00009"	"18/118"	"18"	"118"	"2190839.64172363"	"HCD"	"MS2"	"10.83645"	"15.9"	"100.000"	"90.8736"	"31871"	"31871"	"31855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.7"	""	"14.2"	""	"21.9"	""	"29.9"	""	"32.9"	"26.6"	""	"811"	"68"	"36.000"	"29.000"	"6.68329849763594E-06"	"23"	"0"	"6.991E-08"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"828.97803"	"1656.94878"	"1656.94820"	"0.35"	"0.00029"	"7/118"	"7"	"118"	"119015.320983887"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"91.0860"	"31957"	"31957"	"31939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"6.4"	""	"11.1"	""	"7.7"	""	"13.4"	"11.4"	""	"810"	"20"	"36.000"	"29.000"	"0.363458661772803"	"17"	"0.000885"	"0.007766"	"0.264"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"552.98779"	"1656.94883"	"1656.94820"	"0.38"	"0.00021"	"17/118"	"17"	"118"	"963206.426818848"	"HCD"	"MS2"	"27.96502"	"14.4"	"100.000"	"90.4504"	"31739"	"31739"	"31726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"17.6"	""	"26.0"	""	"22.6"	""	"28.6"	"25.9"	""	"810"	"70"	"36.000"	"29.000"	"4.26044558898405E-06"	"21"	"0"	"6.745E-06"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.97882"	"1656.95036"	"1656.94820"	"1.31"	"0.00108"	"7/118"	"7"	"118"	"215668.931396484"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"90.5297"	"31733"	"31733"	"31716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.1"	""	"13.5"	""	"18.2"	""	"18.7"	""	"17.8"	"16.2"	""	"757"	"20"	"35.000"	"28.000"	"0.407442083358892"	"14"	"0.0001991"	"0.005121"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGVPTETGALTLNR"	"[R].vGVPTETGALTLNR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"828.97906"	"1656.95085"	"1656.94820"	"1.60"	"0.00133"	"9/118"	"9"	"118"	"161455.981323242"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"90.4042"	"31721"	"31721"	"31698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"12.2"	""	"12.9"	""	"13.7"	""	"13.7"	"17.0"	""	"778"	"22"	"35.000"	"28.000"	"0.272238536444884"	"14"	"0.0001991"	"0.003887"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"552.99365"	"1656.96640"	"1656.96849"	"-1.26"	"-0.00070"	"8/94"	"8"	"94"	"3563193.72601318"	"HCD"	"MS2"	"7.02001"	"146.0"	"100.000"	"58.9429"	"18951"	"18951"	"18933"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"153.5"	""	"141.7"	""	"145.4"	""	"298.5"	""	"322.0"	"330.4"	""	"692"	"10"	"35.000"	"28.000"	"3.87325507679635"	"21"	"0.008029"	"0.1022"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"552.99365"	"1656.96640"	"1656.96849"	"-1.26"	"-0.00070"	"6/94"	"6"	"94"	"14865235.553772"	"HCD"	"MS2"	"21.80895"	"578.0"	"100.000"	"58.0542"	"18624"	"18624"	"18606"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"691.7"	""	"600.7"	""	"491.7"	""	"1132.1"	"3.6"	"1243.9"	"1333.9"	""	"692"	"15"	"35.000"	"28.000"	"1.01408906285661"	"14"	"0.0001686"	"0.001733"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"552.99390"	"1656.96714"	"1656.96849"	"-0.82"	"-0.00045"	"5/94"	"5"	"94"	"14553339.9136353"	"HCD"	"MS2"	"19.24928"	"583.7"	"100.000"	"58.3398"	"18705"	"18705"	"18686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"673.7"	""	"598.8"	""	"476.3"	""	"1128.5"	""	"1305.5"	"1380.8"	""	"706"	"16"	"35.000"	"28.000"	"0.884656566320336"	"14"	"9.9E-05"	"0.0007086"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"4"	"4"	"0.6923"	"0.0000"	"1"	"1"	"1"	"414.99728"	"1656.96731"	"1656.96849"	"-0.72"	"-0.00030"	"8/94"	"8"	"94"	"1684285.9262085"	"HCD"	"MS2"	"17.85253"	"73.5"	"100.000"	"58.4641"	"18756"	"18756"	"18734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.7"	""	"68.5"	""	"69.7"	""	"144.3"	"3.9"	"167.5"	"169.1"	""	"706"	"26"	"35.000"	"28.000"	"0.0909441368421909"	"22"	"0.0065"	"0.08062"	"0.05"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"552.99396"	"1656.96732"	"1656.96849"	"-0.71"	"-0.00039"	"7/94"	"7"	"94"	"3565637.00598145"	"HCD"	"MS2"	"13.5615"	"150.6"	"100.000"	"58.6692"	"18875"	"18875"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"147.7"	""	"143.7"	""	"129.5"	""	"312.9"	""	"350.4"	"349.7"	""	"706"	"10"	"35.000"	"28.000"	"3.92441299730402"	"19"	"0.002559"	"0.02527"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"4"	"4"	"0.7200"	"0.0000"	"1"	"1"	"1"	"414.99738"	"1656.96767"	"1656.96849"	"-0.49"	"-0.00020"	"8/94"	"8"	"94"	"1982713.1015625"	"HCD"	"MS2"	"14.14781"	"86.1"	"100.000"	"58.2222"	"18693"	"18693"	"18669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.4"	""	"88.6"	""	"73.0"	""	"167.3"	"0.7"	"195.0"	"201.5"	""	"689"	"25"	"35.000"	"28.000"	"0.118083502465252"	"21"	"0.002373"	"0.02257"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"3"	"3"	"0.3889"	"0.0000"	"1"	"1"	"1"	"552.99457"	"1656.96915"	"1656.96849"	"0.40"	"0.00022"	"5/94"	"5"	"94"	"33854038.0335693"	"HCD"	"MS2"	"5.425349"	"506.8"	"36.089"	"58.6368"	"18827"	"18827"	"18813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"549.5"	""	"499.3"	""	"433.2"	""	"912.2"	""	"1149.4"	"1285.1"	""	"686"	"18"	"35.000"	"28.000"	"0.608546991945326"	"24"	"0.0001991"	"0.003896"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIDLVNRDPK"	"[K].eIDLVNRDPk.[NH]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P51638; P41350"	"Caveolin-3 OS=Rattus norvegicus OX=10116 GN=Cav3 PE=1 SV=1; Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"1"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"552.99481"	"1656.96988"	"1656.96849"	"0.84"	"0.00046"	"5/94"	"5"	"94"	"35847155.7431641"	"HCD"	"MS2"	"5.533024"	"438.0"	"30.602"	"58.3558"	"18748"	"18748"	"18731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"457.7"	""	"415.7"	""	"350.1"	""	"799.2"	""	"1010.2"	"1142.9"	""	"677"	"24"	"35.000"	"28.000"	"0.14340314400777"	"25"	"0.0001686"	"0.001264"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEYQMSLEPIR"	"[R].fEYQmSLEPIR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"829.42535"	"1657.84343"	"1657.84571"	"-1.37"	"-0.00114"	"6/106"	"6"	"106"	"150622.753662109"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"95.5422"	"33760"	"33760"	"33736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"10.5"	""	"6.4"	""	"19.2"	""	"20.4"	"14.7"	""	"757"	"8"	"35.000"	"28.000"	"5.40836363296452"	"13"	"0.005589"	"0.07047"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEYQMSLEPIR"	"[R].fEYQmSLEPIR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"829.42627"	"1657.84526"	"1657.84571"	"-0.27"	"-0.00022"	"8/106"	"8"	"106"	"170885.221740723"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"95.8973"	"33936"	"33936"	"33922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.1"	""	"7.8"	""	"12.5"	""	"27.8"	""	"18.4"	"20.6"	""	"779"	"19"	"35.000"	"28.000"	"0.469361498774814"	"15"	"0.00212"	"0.01897"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEYQMSLEPIR"	"[R].fEYQmSLEPIR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"829.42657"	"1657.84587"	"1657.84571"	"0.10"	"0.00008"	"8/106"	"8"	"106"	"180219.09387207"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"95.8539"	"33886"	"33886"	"33866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.0"	""	"9.2"	""	"10.0"	""	"35.1"	""	"28.2"	"24.5"	""	"770"	"39"	"35.000"	"28.000"	"0.00479138125531983"	"21"	"0.0001991"	"0.004055"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEYQMSLEPIR"	"[R].fEYQmSLEPIR.[Q]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"829.42712"	"1657.84697"	"1657.84571"	"0.76"	"0.00063"	"8/106"	"8"	"106"	"177392.858581543"	"HCD"	"MS2"	"18.64187"	"10.4"	"100.000"	"95.6043"	"33818"	"33818"	"33791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.0"	""	"8.2"	""	"13.5"	""	"31.2"	""	"21.4"	"17.2"	""	"786"	"20"	"35.000"	"28.000"	"0.430915931084271"	"14"	"0.006033"	"0.07368"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.29639"	"1657.87461"	"1657.87470"	"-0.06"	"-0.00003"	"13/108"	"13"	"108"	"1829527.80462646"	"HCD"	"MS2"	"10.94717"	"25.6"	"100.000"	"75.2256"	"25558"	"25558"	"25537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.0"	""	"30.1"	""	"36.9"	""	"39.9"	""	"46.5"	"50.8"	""	"934"	"52"	"36.000"	"29.000"	"0.000302215601554588"	"16"	"0"	"1.502E-06"	"1.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"553.29657"	"1657.87516"	"1657.87470"	"0.27"	"0.00015"	"14/108"	"14"	"108"	"4493208.2088623"	"HCD"	"MS2"	"2.625666"	"46.5"	"100.000"	"75.5227"	"25679"	"25679"	"25661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.0"	""	"56.5"	""	"59.7"	""	"78.2"	""	"87.9"	"89.7"	""	"918"	"60"	"36.000"	"29.000"	"4.33323942215238E-05"	"19"	"0"	"3.234E-07"	"1.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.29663"	"1657.87534"	"1657.87470"	"0.38"	"0.00021"	"14/108"	"14"	"108"	"4457872.26831055"	"HCD"	"MS2"	"2.152227"	"43.8"	"100.000"	"75.6138"	"25747"	"25747"	"25729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.2"	""	"52.3"	""	"56.5"	""	"64.3"	""	"88.2"	"83.8"	""	"929"	"56"	"36.000"	"29.000"	"0.000112198155759967"	"16"	"0"	"4.331E-07"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYIIGELHPDDR"	"[K].tYIIGELHPDDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"553.29675"	"1657.87571"	"1657.87470"	"0.61"	"0.00033"	"11/108"	"11"	"108"	"1195973.61700439"	"HCD"	"MS2"	"9.06776"	"21.6"	"100.000"	"75.3212"	"25628"	"25628"	"25607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.2"	""	"31.2"	""	"24.0"	""	"35.3"	""	"41.5"	"44.7"	""	"921"	"44"	"36.000"	"29.000"	"0.00198257504131433"	"16"	"0"	"0.000119"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEAETMYQIK"	"[R].aEAETmYQIk.[Y]"	"N-Term(TMT6plex); M6(Oxidation); K10(TMT6plex)"	"1"	"1"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"Q10758"	"Keratin, type II cytoskeletal 8 OS=Rattus norvegicus OX=10116 GN=Krt8 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"829.44714"	"1657.88701"	"1657.88713"	"-0.07"	"-0.00006"	"11/82"	"11"	"82"	"137516.252075195"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"56.8390"	"18094"	"18094"	"18069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"11.9"	""	"14.2"	""	"22.7"	""	"21.2"	"26.6"	""	"967"	"19"	"36.000"	"29.000"	"0.665880778210223"	"14"	"0.007379"	"0.09321"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDTSGDYKK"	"[K].gDTSGDYkk.[A]"	"N-Term(TMT6plex); K8(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"P14668"	"Annexin A5 OS=Rattus norvegicus OX=10116 GN=Anxa5 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.31677"	"1657.93576"	"1657.93641"	"-0.39"	"-0.00022"	"7/74"	"7"	"74"	"10787657.739563"	"HCD"	"MS2"	"8.31291"	"612.5"	"84.086"	"32.2885"	"8137"	"8137"	"8119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"1241.2"	""	"652.4"	""	"765.3"	""	"978.7"	""	"1020.6"	"1144.3"	""	"979"	"4"	"36.000"	"29.000"	"18.6961720576203"	"13"	"0.005238"	"0.06616"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQTPVTAQPK"	"[K].eTQTPVTAQPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"829.47809"	"1657.94890"	"1657.95251"	"-2.18"	"-0.00180"	"7/108"	"7"	"108"	"171622.967712402"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"39.9493"	"11241"	"11241"	"11221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.7"	""	"14.2"	""	"13.5"	""	"20.6"	""	"20.8"	"19.0"	""	"897"	"34"	"36.000"	"29.000"	"0.0172489414247341"	"25"	"0.0001991"	"0.004513"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQTPVTAQPK"	"[K].eTQTPVTAQPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.6842"	"0.0000"	"1"	"1"	"1"	"829.47925"	"1657.95122"	"1657.95251"	"-0.78"	"-0.00064"	"6/108"	"6"	"108"	"177277.748657227"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"39.9591"	"11279"	"11279"	"11254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.9"	""	"12.3"	""	"15.4"	""	"27.1"	""	"36.3"	"26.6"	""	"897"	"38"	"36.000"	"29.000"	"0.00788428740860474"	"27"	"0.0001686"	"0.001855"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDTEDWRPR"	"[R].lIEDTEDWRPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"553.62805"	"1658.86960"	"1658.86995"	"-0.21"	"-0.00012"	"10/92"	"10"	"92"	"534120.297973633"	"HCD"	"MS2"	"17.94811"	"19.6"	"100.000"	"83.5446"	"28956"	"28956"	"28940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"19.0"	""	"24.4"	""	"37.2"	""	"44.8"	"42.8"	""	"909"	"16"	"36.000"	"29.000"	"1.04600530601217"	"17"	"0.0001991"	"0.002124"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIEDTEDWRPR"	"[R].lIEDTEDWRPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"Q62920"	"PDZ and LIM domain protein 5 OS=Rattus norvegicus OX=10116 GN=Pdlim5 PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"553.62805"	"1658.86960"	"1658.86995"	"-0.21"	"-0.00012"	"6/92"	"6"	"92"	"686339.843017578"	"HCD"	"MS2"	"19.97032"	"24.5"	"100.000"	"83.5084"	"28913"	"28913"	"28896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"23.3"	""	"27.1"	""	"56.0"	""	"50.6"	"49.3"	""	"909"	"30"	"36.000"	"29.000"	"0.0468310491740714"	"23"	"0"	"9.5E-05"	"0.658"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"LIADFRDDPDPR"	"[K].lIADFRDDPDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"553.62805"	"1658.86960"	"1658.86995"	"-0.21"	"-0.00012"	"5/112"	"5"	"112"	"2651941.85705566"	"HCD"	"MS2"	"25.74466"	"63.9"	"100.000"	"76.2428"	"26003"	"26003"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"134.6"	""	"98.1"	""	"103.9"	""	"73.0"	""	"91.5"	"102.2"	""	"909"	"14"	"36.000"	"29.000"	"1.83879742776488"	"18"	"0.002875"	"0.03103"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIADFRDDPDPR"	"[K].lIADFRDDPDPR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"1"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"553.62830"	"1658.87033"	"1658.86995"	"0.23"	"0.00013"	"7/112"	"7"	"112"	"2455834.12921143"	"HCD"	"MS2"	"29.89788"	"59.0"	"100.000"	"76.1311"	"25926"	"25926"	"25909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.4"	""	"94.4"	""	"100.4"	""	"58.1"	"1.7"	"84.3"	"92.4"	""	"904"	"7"	"36.000"	"29.000"	"8.69237461467392"	"17"	"0.003401"	"0.03822"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"553.63092"	"1658.87821"	"1658.87985"	"-0.99"	"-0.00055"	"11/116"	"11"	"116"	"611672.161254883"	"HCD"	"MS2"	"5.823926"	"17.8"	"100.000"	"81.6433"	"28160"	"28160"	"28141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"21.0"	""	"25.0"	""	"31.6"	""	"33.2"	"35.6"	""	"947"	"30"	"36.000"	"29.000"	"0.0425912104854471"	"14"	"9.9E-05"	"0.0007648"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.8361"	"0.0000"	"1"	"1"	"1"	"829.94318"	"1658.87908"	"1658.87985"	"-0.46"	"-0.00039"	"10/116"	"10"	"116"	"901529.810791016"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"81.9082"	"28296"	"28296"	"28275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.2"	""	"51.8"	""	"58.5"	""	"51.9"	""	"46.1"	"38.4"	""	"946"	"61"	"36.000"	"29.000"	"3.76583372747392E-05"	"27"	"0"	"2.313E-06"	"0.99"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"829.94342"	"1658.87956"	"1658.87985"	"-0.17"	"-0.00014"	"10/116"	"10"	"116"	"181572.382568359"	"HCD"	"MS2"	"18.17825"	"9.6"	"100.000"	"81.5256"	"28113"	"28113"	"28096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"16.1"	""	"16.6"	""	"13.7"	""	"16.7"	"11.8"	""	"944"	"20"	"36.000"	"29.000"	"0.50575711207215"	"14"	"9.9E-05"	"0.0009901"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"829.94342"	"1658.87956"	"1658.87985"	"-0.17"	"-0.00014"	"13/116"	"13"	"116"	"351055.15234375"	"HCD"	"MS2"	"15.33831"	"16.7"	"100.000"	"82.1230"	"28355"	"28355"	"28336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.1"	""	"25.5"	""	"29.9"	""	"24.8"	""	"31.0"	"21.0"	""	"944"	"52"	"36.000"	"29.000"	"0.000309700565694971"	"25"	"0"	"9.832E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"829.94354"	"1658.87981"	"1658.87985"	"-0.02"	"-0.00002"	"10/116"	"10"	"116"	"886819.318664551"	"HCD"	"MS2"	"0"	"33.3"	"100.000"	"81.8254"	"28234"	"28234"	"28215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.1"	""	"67.5"	""	"66.2"	""	"43.3"	""	"46.4"	"29.9"	""	"941"	"69"	"36.000"	"29.000"	"6.63070379657492E-06"	"26"	"0"	"2.101E-07"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"0.9778"	"0.0000"	"1"	"1"	"1"	"829.94373"	"1658.88017"	"1658.87985"	"0.20"	"0.00016"	"14/116"	"14"	"116"	"245310.001281738"	"HCD"	"MS2"	"24.69173"	"11.7"	"100.000"	"82.2082"	"28418"	"28418"	"28398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"15.8"	""	"20.5"	""	"17.9"	""	"20.0"	"15.4"	""	"936"	"45"	"36.000"	"29.000"	"0.0016264692355542"	"17"	"0"	"6.477E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"553.63165"	"1658.88041"	"1658.87985"	"0.34"	"0.00019"	"12/116"	"12"	"116"	"1005027.74694824"	"HCD"	"MS2"	"5.723833"	"22.0"	"100.000"	"81.9479"	"28284"	"28284"	"28263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"28.8"	""	"39.5"	""	"34.2"	"2.7"	"40.4"	"32.1"	""	"946"	"33"	"36.000"	"29.000"	"0.0243703148887171"	"17"	"0"	"0.0001426"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"553.63208"	"1658.88169"	"1658.87985"	"1.11"	"0.00061"	"12/116"	"12"	"116"	"622269.822998047"	"HCD"	"MS2"	"8.762839"	"18.2"	"100.000"	"81.7005"	"28212"	"28212"	"28184"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"24.0"	""	"23.8"	""	"28.6"	""	"35.7"	"34.2"	""	"947"	"26"	"36.000"	"29.000"	"0.106492735586324"	"19"	"0"	"8.369E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEDVTPIPSDSTR"	"[R].iEDVTPIPSDSTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"P13471"	"40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"829.94464"	"1658.88201"	"1658.87985"	"1.30"	"0.00108"	"9/116"	"9"	"116"	"179416.054748535"	"HCD"	"MS2"	"31.96103"	"9.5"	"100.000"	"81.5806"	"28163"	"28163"	"28140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"14.0"	""	"16.1"	""	"15.4"	""	"14.1"	"15.9"	""	"945"	"22"	"36.000"	"29.000"	"0.303669946432292"	"14"	"9.9E-05"	"0.0006346"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"829.95160"	"1658.89592"	"1658.90014"	"-2.54"	"-0.00211"	"12/106"	"12"	"106"	"249710.461669922"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"56.8665"	"18105"	"18105"	"18081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.1"	""	"27.7"	""	"24.6"	""	"35.8"	"0.6"	"38.5"	"44.5"	""	"1001"	"37"	"36.000"	"30.000"	"0.0111020730811001"	"20"	"0.0001991"	"0.002645"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"829.95251"	"1658.89775"	"1658.90014"	"-1.44"	"-0.00119"	"12/106"	"12"	"106"	"261573.087463379"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"56.6085"	"18036"	"18036"	"18011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"30.2"	""	"28.2"	""	"32.6"	""	"41.2"	"40.4"	""	"992"	"35"	"36.000"	"29.000"	"0.0173173596477379"	"23"	"0.0001991"	"0.003904"	"0.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADTPSLGEGPEK"	"[K].aDTPSLGEGPEk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"Q62753"	"Syntaxin-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Stxbp2 PE=2 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"553.63812"	"1658.89981"	"1658.90014"	"-0.19"	"-0.00011"	"14/106"	"14"	"106"	"1200879.68499756"	"HCD"	"MS2"	"47.75036"	"49.0"	"100.000"	"56.9812"	"18152"	"18152"	"18126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.3"	""	"59.5"	""	"59.7"	""	"77.8"	""	"107.5"	"98.0"	""	"988"	"34"	"36.000"	"29.000"	"0.0178948041217849"	"22"	"9.9E-05"	"0.0004918"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"553.64709"	"1658.92673"	"1658.92746"	"-0.44"	"-0.00024"	"11/126"	"11"	"126"	"230565.710449219"	"HCD"	"MS2"	"21.31534"	"8.9"	"100.000"	"99.7488"	"35490"	"35490"	"35466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.4"	""	"11.7"	""	"11.6"	""	"12.9"	""	"19.3"	"21.6"	""	"944"	"24"	"36.000"	"29.000"	"0.173756875559275"	"19"	"0.0001686"	"0.001143"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8030"	"0.0000"	"1"	"1"	"1"	"553.64709"	"1658.92673"	"1658.92746"	"-0.44"	"-0.00024"	"15/126"	"15"	"126"	"909827.407653809"	"HCD"	"MS2"	"6.599687"	"9.4"	"100.000"	"99.3831"	"35313"	"35313"	"35294"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"12.5"	""	"9.0"	""	"18.5"	""	"20.1"	"16.7"	""	"944"	"66"	"36.000"	"29.000"	"1.06400090813595E-05"	""	"0"	"3.943E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"829.96710"	"1658.92693"	"1658.92746"	"-0.32"	"-0.00027"	"9/126"	"9"	"126"	"472022.581237793"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"99.3785"	"35311"	"35311"	"35294"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.1"	""	"30.2"	""	"22.9"	""	"42.5"	"0.6"	"58.2"	"57.8"	""	"940"	"63"	"36.000"	"29.000"	"2.32326022883812E-05"	""	"0"	"9.389E-08"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7761"	"0.0000"	"1"	"1"	"1"	"829.96753"	"1658.92778"	"1658.92746"	"0.19"	"0.00016"	"11/126"	"11"	"126"	"377655.822875977"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"99.4580"	"35372"	"35372"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.7"	""	"19.0"	""	"23.1"	""	"31.1"	"0.8"	"51.5"	"48.4"	""	"941"	"67"	"36.000"	"29.000"	"8.88299929749807E-06"	""	"0"	"8.287E-07"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TINEVENQILTR"	"[R].tINEVENQILTR.[D]"	"N-Term(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7910"	"0.0000"	"1"	"1"	"1"	"553.64746"	"1658.92783"	"1658.92746"	"0.22"	"0.00012"	"14/126"	"14"	"126"	"677673.793884277"	"HCD"	"MS2"	"14.55178"	"10.7"	"100.000"	"99.4283"	"35360"	"35360"	"35343"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"15.1"	""	"11.6"	""	"16.7"	""	"21.7"	"21.0"	""	"941"	"67"	"36.000"	"29.000"	"9.89827755910129E-06"	""	"0"	"9.325E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETQTPVTAQPK"	"[K].eTQTPVTAqPk.[E]"	"N-Term(TMT6plex); Q9(Deamidated); K11(TMT6plex)"	"1"	"1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"Q62871"	"Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus OX=10116 GN=Dync1i2 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"829.98212"	"1658.95696"	"1658.93652"	"12.32"	"0.01022"	"5/108"	"5"	"108"	"133945.6875"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"39.9890"	"11291"	"11291"	"11266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.9"	""	"7.5"	""	"11.9"	""	"20.3"	""	"29.3"	"25.6"	""	"825"	"13"	"36.000"	"29.000"	"2.26164248029852"	"14"	"0.004392"	"0.05151"	"0.092"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGGFDNTAMSK"	"[K].aSGGFDNTAmSk.[E]"	"N-Term(TMT6plex); M10(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.42352"	"1659.83977"	"1659.84124"	"-0.89"	"-0.00074"	"9/116"	"9"	"116"	"186174.05065918"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"40.2687"	"11371"	"11371"	"11342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"16.3"	""	"23.2"	""	"36.1"	""	"26.1"	"29.1"	""	"761"	"19"	"35.000"	"28.000"	"0.44499451828306"	"14"	"0.004893"	"0.0608"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGGFDNTAMSK"	"[K].aSGGFDNTAmSk.[E]"	"N-Term(TMT6plex); M10(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"Q9JJ09"	"Sodium-dependent phosphate transport protein 2B OS=Rattus norvegicus OX=10116 GN=Slc34a2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.42438"	"1659.84148"	"1659.84124"	"0.14"	"0.00012"	"10/116"	"10"	"116"	"198580.794067383"	"HCD"	"MS2"	"34.28336"	"14.2"	"100.000"	"40.1361"	"11351"	"11351"	"11325"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.5"	""	"14.8"	""	"13.3"	""	"36.8"	""	"27.3"	"24.0"	""	"764"	"17"	"35.000"	"28.000"	"0.837651485303872"	"14"	"0.002328"	"0.02194"	"0.17"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDILPYDYNR"	"[R].yVDILPYDYNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"553.95679"	"1659.85581"	"1659.85799"	"-1.31"	"-0.00073"	"10/92"	"10"	"92"	"333119.330322266"	"HCD"	"MS2"	"61.87848"	"6.0"	"100.000"	"109.5533"	"39344"	"39344"	"39330"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.8"	""	"8.4"	""	"7.4"	""	"9.3"	""	"10.6"	"13.5"	""	"850"	"12"	"36.000"	"29.000"	"2.56678167484962"	"16"	"0.0001686"	"0.001201"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDILPYDYNR"	"[R].yVDILPYDYNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.43188"	"1659.85649"	"1659.85799"	"-0.90"	"-0.00075"	"4/92"	"4"	"92"	"153616.496459961"	"HCD"	"MS2"	"15.42815"	"8.8"	"100.000"	"109.4581"	"39295"	"39295"	"39285"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"15.2"	""	"10.6"	""	"10.5"	""	"18.3"	"14.7"	""	"849"	"16"	"36.000"	"29.000"	"1.19365190250435"	"13"	"0.004852"	"0.05934"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDILPYDYNR"	"[R].yVDILPYDYNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.43207"	"1659.85686"	"1659.85799"	"-0.68"	"-0.00056"	"4/92"	"4"	"92"	"117434.346740723"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"109.4535"	"39306"	"39306"	"39289"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"7.4"	""	"3.9"	""	"6.8"	""	"10.6"	"11.2"	""	"847"	"18"	"36.000"	"29.000"	"0.658951444984749"	"14"	"0.004959"	"0.06192"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDILPYDYNR"	"[R].yVDILPYDYNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"553.95734"	"1659.85746"	"1659.85799"	"-0.32"	"-0.00018"	"6/92"	"6"	"92"	"306493.796875"	"HCD"	"MS2"	"4.911259"	"6.7"	"100.000"	"109.3212"	"39243"	"39243"	"39230"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.5"	""	"10.7"	""	"13.2"	""	"10.0"	""	"11.3"	"11.8"	""	"872"	"10"	"36.000"	"29.000"	"4.25095482044781"	"18"	"0.0001991"	"0.003435"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDILPYDYNR"	"[R].yVDILPYDYNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"P04157"	"Receptor-type tyrosine-protein phosphatase C OS=Rattus norvegicus OX=10116 GN=Ptprc PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"830.43280"	"1659.85832"	"1659.85799"	"0.20"	"0.00017"	"5/92"	"5"	"92"	"108130.875976563"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"109.1863"	"39193"	"39193"	"39182"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"6.9"	""	"9.7"	""	"9.7"	""	"8.6"	"11.2"	""	"881"	"9"	"36.000"	"29.000"	"5.99716382626251"	"13"	"0.008029"	"0.1021"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAPDTLLLEK"	"[K].sDAPDTLLLEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"553.99017"	"1659.95597"	"1659.95692"	"-0.58"	"-0.00032"	"10/98"	"10"	"98"	"336399.256774902"	"HCD"	"MS2"	"17.15579"	"12.8"	"100.000"	"100.8051"	"35920"	"35920"	"35893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"15.3"	""	"14.1"	""	"22.5"	""	"28.1"	"24.8"	""	"923"	"27"	"36.000"	"29.000"	"0.0857376756024819"	"17"	"0.0001991"	"0.002629"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAPDTLLLEK"	"[K].sDAPDTLLLEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"830.48193"	"1659.95659"	"1659.95692"	"-0.20"	"-0.00017"	"8/98"	"8"	"98"	"220908.15838623"	"HCD"	"MS2"	"15.28405"	"17.4"	"100.000"	"100.4901"	"35764"	"35764"	"35740"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"19.5"	""	"20.7"	""	"30.8"	""	"33.2"	"28.4"	""	"926"	"50"	"36.000"	"29.000"	"0.000467284086253504"	"21"	"9.9E-05"	"0.00045"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDAPDTLLLEK"	"[K].sDAPDTLLLEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"Q08603"	"Geranylgeranyl transferase type-2 subunit beta OS=Rattus norvegicus OX=10116 GN=Rabggtb PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"830.48297"	"1659.95867"	"1659.95692"	"1.05"	"0.00087"	"11/98"	"11"	"98"	"167582.95892334"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"100.5744"	"35826"	"35826"	"35801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"18.9"	""	"16.6"	""	"24.8"	""	"27.9"	"25.5"	""	"937"	"27"	"36.000"	"29.000"	"0.104402186743314"	"18"	"0.001453"	"0.01172"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTNDMIHAENMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.7945"	"0.0000"	"1"	"1"	"1"	"554.60223"	"1661.79215"	"1661.79369"	"-0.93"	"-0.00051"	"9/122"	"9"	"122"	"2200570.89074707"	"HCD"	"MS2"	"32.63132"	"55.4"	"100.000"	"40.3179"	"11425"	"11425"	"11402"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	"1.9"	"67.7"	""	"58.3"	""	"83.9"	""	"128.8"	"112.3"	""	"497"	"73"	"33.000"	"26.000"	"1.31924784391401E-06"	""	"0"	"9.312E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTNDMIHAENMR"	"[K].tTNDMIHAENMR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"554.60266"	"1661.79343"	"1661.79369"	"-0.16"	"-0.00009"	"10/122"	"10"	"122"	"2007929.86810303"	"HCD"	"MS2"	"14.2727"	"47.8"	"100.000"	"40.4526"	"11446"	"11446"	"11421"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.7"	""	"52.2"	""	"49.5"	""	"74.7"	""	"107.5"	"104.4"	""	"497"	"47"	"33.000"	"26.000"	"0.000500410476090804"	"20"	"0"	"2.918E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSPFLSPLDASR"	"[R].eNSPFLSPLDASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.43903"	"1661.87078"	"1661.86962"	"0.70"	"0.00058"	"4/140"	"4"	"140"	"94393.5405273438"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"96.9549"	"34332"	"34332"	"34306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.9"	""	"4.1"	""	"10.4"	""	"12.8"	""	"13.0"	"10.5"	""	"1008"	"7"	"37.000"	"30.000"	"10.2666920716368"	"13"	"0.002588"	"0.02704"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSPFLSPLDASR"	"[R].eNSPFLSPLDASR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"Q63632"	"Solute carrier family 12 member 4 OS=Rattus norvegicus OX=10116 GN=Slc12a4 PE=1 SV=1"	"0"	"2"	"2"	"0.7333"	"0.0000"	"1"	"1"	"1"	"831.43921"	"1661.87114"	"1661.86962"	"0.92"	"0.00076"	"5/140"	"5"	"140"	"97713.6986083984"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"97.0175"	"34388"	"34388"	"34362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.2"	""	"6.6"	""	"7.6"	""	"11.5"	""	"12.6"	"11.7"	""	"1018"	"15"	"37.000"	"30.000"	"1.45116829815949"	"17"	"0.001615"	"0.01447"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63330"	"1661.88535"	"1661.88675"	"-0.84"	"-0.00047"	"11/100"	"11"	"100"	"6510381.72546387"	"HCD"	"MS2"	"7.215522"	"122.1"	"100.000"	"24.6469"	"5092"	"5092"	"5071"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"165.2"	""	"176.1"	""	"187.0"	""	"255.0"	"1.9"	"190.5"	"178.5"	""	"1062"	"36"	"37.000"	"30.000"	"0.0119976039398734"	"15"	"0"	"7.636E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"554.63336"	"1661.88553"	"1661.88675"	"-0.73"	"-0.00041"	"9/100"	"9"	"100"	"13822772.2139282"	"HCD"	"MS2"	"3.663682"	"194.7"	"75.276"	"24.9291"	"5206"	"5206"	"5193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"226.5"	""	"264.2"	""	"310.3"	""	"417.8"	"0.8"	"322.1"	"300.1"	""	"1062"	"44"	"37.000"	"30.000"	"0.00236099203026097"	"17"	"0"	"3.763E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"831.44666"	"1661.88603"	"1661.88675"	"-0.43"	"-0.00036"	"8/100"	"8"	"100"	"281217.454345703"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"24.7479"	"5133"	"5133"	"5107"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"27.8"	""	"27.8"	""	"41.7"	""	"29.4"	"26.0"	""	"1056"	"33"	"37.000"	"30.000"	"0.0236392624605119"	"18"	"0.002711"	"0.02863"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63354"	"1661.88608"	"1661.88675"	"-0.40"	"-0.00022"	"9/100"	"9"	"100"	"11025592.0285034"	"HCD"	"MS2"	"6.297485"	"199.9"	"97.204"	"24.7933"	"5188"	"5188"	"5176"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.0"	""	"274.3"	""	"297.9"	""	"449.8"	""	"328.9"	"314.3"	""	"1056"	"42"	"37.000"	"30.000"	"0.00305234713030219"	"15"	"0"	"3.069E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.44672"	"1661.88616"	"1661.88675"	"-0.36"	"-0.00030"	"7/100"	"7"	"100"	"304945.864379883"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"24.6901"	"5147"	"5147"	"5117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.8"	""	"30.1"	""	"35.7"	""	"46.5"	""	"30.4"	"33.9"	""	"1056"	"20"	"37.000"	"30.000"	"0.483764418784416"	"14"	"0.006845"	"0.08537"	"0.044"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQGVMVGMGQK"	"[R].hQGVmVGmGQk.[D]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"554.63385"	"1661.88700"	"1661.88675"	"0.15"	"0.00008"	"13/100"	"13"	"100"	"7160030.7635498"	"HCD"	"MS2"	"11.12945"	"135.1"	"100.000"	"24.5066"	"5072"	"5072"	"5050"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.4"	""	"185.6"	""	"217.3"	""	"294.4"	""	"213.1"	"204.4"	""	"1052"	"44"	"37.000"	"30.000"	"0.00199519682096157"	"15"	"0"	"2.483E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYSDHDVIK"	"[K].lNYSDHDVIk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"554.64642"	"1661.92472"	"1661.92629"	"-0.95"	"-0.00053"	"15/94"	"15"	"94"	"4016276.18066406"	"HCD"	"MS2"	"5.860496"	"139.4"	"100.000"	"61.2426"	"19919"	"19919"	"19900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"207.4"	""	"142.2"	""	"159.5"	""	"245.3"	"1.0"	"284.6"	"282.9"	""	"1137"	"48"	"37.000"	"30.000"	"0.000990217207523133"	"21"	"0"	"1.98E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGAFPGPSGSLK"	"[K].eGGAFPGPSGSLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"554.64648"	"1661.92490"	"1661.92629"	"-0.84"	"-0.00046"	"12/116"	"12"	"116"	"635946.86907959"	"HCD"	"MS2"	"74.33956"	"26.2"	"100.000"	"74.5200"	"25273"	"25273"	"25246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.9"	""	"31.9"	""	"42.3"	""	"43.1"	"1.1"	"46.1"	"45.5"	""	"1127"	"32"	"37.000"	"30.000"	"0.0369737857561687"	"17"	"0.0001686"	"0.001065"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGGAFPGPSGSLK"	"[K].eGGAFPGPSGSLk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"P43527"	"Caspase-1 OS=Rattus norvegicus OX=10116 GN=Casp1 PE=2 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"554.64667"	"1661.92545"	"1661.92629"	"-0.51"	"-0.00028"	"10/116"	"10"	"116"	"635131.79284668"	"HCD"	"MS2"	"48.72411"	"24.9"	"100.000"	"74.6249"	"25346"	"25346"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"30.9"	""	"42.3"	""	"43.6"	""	"42.7"	"46.3"	""	"1153"	"25"	"37.000"	"30.000"	"0.1643612031216"	"15"	"0.0001686"	"0.001254"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNYSDHDVIK"	"[K].lNYSDHDVIk.[W]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"P84092"	"AP-2 complex subunit mu OS=Rattus norvegicus OX=10116 GN=Ap2m1 PE=1 SV=1"	"0"	"3"	"3"	"0.8913"	"0.0000"	"1"	"1"	"1"	"554.64697"	"1661.92636"	"1661.92629"	"0.04"	"0.00002"	"15/94"	"15"	"94"	"4164651.64019775"	"HCD"	"MS2"	"6.888696"	"138.3"	"100.000"	"61.3141"	"19917"	"19917"	"19896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"207.3"	""	"153.6"	""	"152.2"	""	"246.8"	"0.8"	"275.9"	"275.8"	""	"1156"	"46"	"37.000"	"30.000"	"0.00137698065328932"	"21"	"0"	"3.702E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYmAAk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.4906"	"0.0000"	"1"	"1"	"1"	"831.91467"	"1662.82207"	"1662.82315"	"-0.65"	"-0.00054"	"14/104"	"14"	"104"	"210312.659484863"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"45.0191"	"13300"	"13300"	"13274"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"26.6"	""	"35.1"	""	"14.6"	""	"23.8"	"26.4"	""	"739"	"53"	"35.000"	"28.000"	"0.000173226544702676"	"16"	"0"	"0.0001224"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTMGYmAAk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"831.91559"	"1662.82390"	"1662.82315"	"0.45"	"0.00038"	"8/104"	"8"	"104"	"244185.940490723"	"HCD"	"MS2"	"0"	"20.1"	"100.000"	"44.8178"	"13252"	"13252"	"13226"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.1"	""	"32.2"	""	"30.4"	""	"16.3"	""	"27.2"	"30.1"	""	"742"	"50"	"35.000"	"28.000"	"0.000368446053964166"	"17"	"9.9E-05"	"0.0004385"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTmGYMAAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"831.91614"	"1662.82500"	"1662.82315"	"1.11"	"0.00092"	"11/104"	"11"	"104"	"219544.642883301"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"46.7790"	"14047"	"14047"	"14018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.0"	""	"18.9"	""	"21.1"	""	"18.0"	""	"30.1"	"28.4"	""	"728"	"17"	"35.000"	"28.000"	"0.66696244974312"	"14"	"0.002525"	"0.02503"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTmGYMAAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"831.91644"	"1662.82561"	"1662.82315"	"1.48"	"0.00123"	"12/104"	"12"	"104"	"448702.165893555"	"HCD"	"MS2"	"0"	"21.1"	"100.000"	"47.1632"	"14165"	"14165"	"14142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"19.1"	""	"24.0"	""	"28.5"	""	"50.2"	"45.1"	""	"732"	"22"	"35.000"	"28.000"	"0.240149167466863"	"15"	"0.001261"	"0.01012"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"554.95227"	"1662.84226"	"1662.84374"	"-0.89"	"-0.00049"	"13/114"	"13"	"114"	"1125999.91107178"	"HCD"	"MS2"	"61.05823"	"14.9"	"100.000"	"99.1141"	"35234"	"35234"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"20.1"	""	"21.8"	""	"29.6"	""	"27.8"	"25.4"	""	"803"	"35"	"36.000"	"29.000"	"0.0114996745491749"	"20"	"0"	"2.48E-06"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.92529"	"1662.84331"	"1662.84374"	"-0.26"	"-0.00021"	"9/114"	"9"	"114"	"172080.166137695"	"HCD"	"MS2"	"12.04718"	"7.6"	"100.000"	"99.4156"	"35326"	"35326"	"35306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"12.3"	""	"10.3"	""	"13.6"	""	"13.8"	"11.8"	""	"824"	"40"	"36.000"	"29.000"	"0.00434407401313198"	"15"	"9.9E-05"	"0.0004198"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"831.92542"	"1662.84355"	"1662.84374"	"-0.11"	"-0.00009"	"12/114"	"12"	"114"	"781391.35345459"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"99.0693"	"35186"	"35186"	"35170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.0"	""	"25.8"	""	"23.9"	""	"37.2"	""	"38.3"	"29.0"	""	"822"	"66"	"36.000"	"29.000"	"1.04916023539377E-05"	""	"0"	"4.545E-08"	"1.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8592"	"0.0000"	"1"	"1"	"1"	"831.92560"	"1662.84392"	"1662.84374"	"0.11"	"0.00009"	"12/114"	"12"	"114"	"616423.990966797"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"99.1097"	"35232"	"35232"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"22.9"	""	"15.8"	""	"30.9"	""	"34.5"	"22.0"	""	"827"	"71"	"36.000"	"29.000"	"3.05826781236581E-06"	"27"	"0"	"9.839E-08"	"1.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"831.92603"	"1662.84477"	"1662.84374"	"0.62"	"0.00052"	"12/114"	"12"	"114"	"306329.514160156"	"HCD"	"MS2"	"7.27603"	"9.1"	"100.000"	"99.3959"	"35347"	"35347"	"35330"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.2"	""	"13.8"	""	"9.0"	""	"17.2"	""	"17.3"	"18.4"	""	"818"	"74"	"36.000"	"29.000"	"1.82693589189744E-06"	""	"0"	"2.137E-08"	"1.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGQGAGALVHSE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"554.95313"	"1662.84482"	"1662.84374"	"0.65"	"0.00036"	"15/114"	"15"	"114"	"1359541.9944458"	"HCD"	"MS2"	"29.41633"	"17.4"	"100.000"	"99.1018"	"35200"	"35200"	"35183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"20.6"	""	"22.9"	""	"37.4"	""	"30.8"	"29.7"	""	"818"	"37"	"36.000"	"29.000"	"0.00850595945025412"	"18"	"0"	"2.516E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VITNVNDNYEPR"	"[K].vITNVNDNYEPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31721"	"Complement C1q subcomponent subunit B OS=Rattus norvegicus OX=10116 GN=C1qb PE=1 SV=2"	"P31721"	"Complement C1q subcomponent subunit B OS=Rattus norvegicus OX=10116 GN=C1qb PE=1 SV=2"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"831.93518"	"1662.86308"	"1662.86486"	"-1.07"	"-0.00089"	"7/118"	"7"	"118"	"183123.397644043"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"61.4130"	"19989"	"19989"	"19958"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"15.2"	""	"12.0"	""	"23.6"	""	"30.6"	"28.5"	""	"952"	"21"	"36.000"	"29.000"	"0.359423900368747"	"19"	"0.0001991"	"0.004013"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALAVDWSGEK"	"[K].eALAVDWSGEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"831.95813"	"1662.90898"	"1662.91031"	"-0.80"	"-0.00066"	"13/98"	"13"	"98"	"166307.869567871"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"97.5734"	"34582"	"34582"	"34551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"14.8"	""	"17.1"	""	"17.9"	""	"13.2"	"20.4"	""	"1128"	"50"	"37.000"	"30.000"	"0.000530003947158455"	"16"	"0"	"6.543E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EALAVDWSGEK"	"[K].eALAVDWSGEk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"Q6AXQ0"	"SUMO-activating enzyme subunit 1 OS=Rattus norvegicus OX=10116 GN=Sae1 PE=2 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"831.95850"	"1662.90972"	"1662.91031"	"-0.36"	"-0.00030"	"9/98"	"9"	"98"	"134824.586853027"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"97.6891"	"34660"	"34660"	"34631"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"13.9"	""	"14.4"	""	"14.4"	""	"13.8"	"13.7"	""	"1158"	"30"	"37.000"	"30.000"	"0.0597968853935849"	"18"	"9.9E-05"	"0.0006969"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"831.96051"	"1662.91374"	"1662.91368"	"0.04"	"0.00003"	"13/94"	"13"	"94"	"178092.122558594"	"HCD"	"MS2"	"19.46815"	"16.0"	"100.000"	"85.9919"	"29945"	"29945"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"21.3"	""	"19.4"	""	"26.9"	"1.5"	"31.6"	"31.0"	""	"1141"	"47"	"37.000"	"30.000"	"0.00110982792656573"	"22"	"0"	"9.059E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"831.96088"	"1662.91448"	"1662.91368"	"0.48"	"0.00040"	"8/94"	"8"	"94"	"174617.824523926"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"86.1999"	"29997"	"29997"	"29981"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"15.2"	""	"21.2"	""	"24.6"	""	"23.2"	"28.8"	""	"1119"	"43"	"37.000"	"30.000"	"0.00281060678837775"	"19"	"0"	"8.19E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQQVEEMK"	"[R].aLEQQVEEMk.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"3"	"831.96130"	"1662.91533"	"1662.91368"	"0.99"	"0.00083"	"5/94"	"5"	"94"	"135605.592041016"	"HCD"	"MS2"	"43.40036"	"11.1"	"100.000"	"85.9118"	"29883"	"29883"	"29854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"13.9"	""	"15.6"	""	"20.9"	""	"19.0"	"21.7"	""	"1111"	"16"	"37.000"	"30.000"	"1.39535291270357"	"18"	"0.004852"	"0.05915"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPGTGTSEGPGGAFSR"	"[K].gPGTGTSEGPGGAFSR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"B2RYF7"	"WASH complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Washc1 PE=2 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"5"	"832.41583"	"1663.82439"	"1663.82373"	"0.40"	"0.00033"	"3/142"	"3"	"142"	"99837.5059204102"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"41.8595"	"12047"	"12047"	"12017"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"8.2"	""	"8.5"	""	"12.0"	""	"9.2"	"12.3"	""	"734"	"0"	"35.000"	"28.000"	"36.1964571226654"	"13"	"0.00504"	"0.06394"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGqGAGALVHSE.[-]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.41833"	"1663.82939"	"1663.82775"	"0.99"	"0.00082"	"4/114"	"4"	"114"	"85075.3686523438"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"105.7864"	"37910"	"37910"	"37889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.1"	""	"4.3"	""	"3.3"	""	"6.4"	""	"6.9"	"7.3"	""	"778"	"11"	"35.000"	"28.000"	"2.97817080088479"	"13"	"0.003818"	"0.04108"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGFGQGAGALVHSE"	"[K].gFGFGqGAGALVHSE.[-]"	"N-Term(TMT6plex); Q6(Deamidated)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.41864"	"1663.83000"	"1663.82775"	"1.35"	"0.00113"	"5/114"	"5"	"114"	"81035.9867553711"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"105.5639"	"37803"	"37803"	"37785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.3"	""	"5.0"	""	"4.0"	""	"5.1"	""	"2.9"	"6.0"	""	"775"	"31"	"35.000"	"28.000"	"0.0287919915934972"	"14"	"0.0005161"	"0.006895"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVDDIIQPSSTR"	"[R].gFVDDIIQPSSTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7407"	"0.0000"	"1"	"1"	"1"	"832.44604"	"1663.88481"	"1663.88527"	"-0.27"	"-0.00023"	"6/122"	"6"	"122"	"102838.156982422"	"HCD"	"MS2"	"20.07934"	"6.6"	"100.000"	"98.7920"	"35075"	"35075"	"35050"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"9.3"	""	"7.7"	""	"10.4"	""	"16.2"	"9.2"	""	"1115"	"27"	"37.000"	"30.000"	"0.114615900726116"	"21"	"0.0001991"	"0.005194"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVDDIIQPSSTR"	"[R].gFVDDIIQPSSTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"555.30011"	"1663.88578"	"1663.88527"	"0.31"	"0.00017"	"12/122"	"12"	"122"	"296658.701965332"	"HCD"	"MS2"	"24.01289"	"9.1"	"100.000"	"98.8897"	"35144"	"35144"	"35122"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"11.3"	""	"23.6"	""	"9.9"	""	"16.1"	"14.8"	""	"1107"	"40"	"37.000"	"30.000"	"0.00511820439274806"	"25"	"0"	"5.178E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFVDDIIQPSSTR"	"[R].gFVDDIIQPSSTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"P07633"	"Propionyl-CoA carboxylase beta chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pccb PE=2 SV=1"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"832.44720"	"1663.88713"	"1663.88527"	"1.12"	"0.00093"	"5/122"	"5"	"122"	"163796.509277344"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"98.8828"	"35141"	"35141"	"35122"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"16.6"	""	"11.4"	""	"16.7"	""	"21.5"	"18.1"	""	"1111"	"23"	"37.000"	"30.000"	"0.27840950827995"	"20"	"0.0005161"	"0.006585"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPINEEALEK"	"[R].yPINEEALEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"555.31439"	"1663.92862"	"1663.93071"	"-1.25"	"-0.00070"	"8/92"	"8"	"92"	"168870.51184082"	"HCD"	"MS2"	"22.37575"	"8.8"	"100.000"	"89.6779"	"31430"	"31430"	"31411"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"10.8"	""	"14.2"	""	"11.5"	""	"20.7"	"15.0"	""	"1013"	"24"	"37.000"	"30.000"	"0.209208559758017"	"26"	"0.002462"	"0.02318"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"832.46851"	"1663.92974"	"1663.93071"	"-0.59"	"-0.00049"	"7/84"	"7"	"84"	"272526.407348633"	"HCD"	"MS2"	"7.533461"	"21.8"	"100.000"	"93.8937"	"33090"	"33090"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"24.7"	""	"22.9"	""	"31.0"	"2.0"	"38.9"	"53.2"	""	"1016"	"44"	"37.000"	"30.000"	"0.00215706738484727"	"27"	"9.9E-05"	"0.001024"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDEINPETK"	"[K].lFDEINPETk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"555.31482"	"1663.92990"	"1663.93071"	"-0.48"	"-0.00027"	"7/92"	"7"	"92"	"358183.618469238"	"HCD"	"MS2"	"45.92602"	"14.8"	"100.000"	"104.4796"	"37391"	"37391"	"37373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"11.5"	""	"32.7"	""	"24.1"	""	"23.9"	"29.4"	""	"1019"	"26"	"37.000"	"30.000"	"0.127980613685413"	"22"	"9.9E-05"	"0.0005704"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"555.31482"	"1663.92990"	"1663.93071"	"-0.48"	"-0.00027"	"9/84"	"9"	"84"	"688624.307373047"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"93.5630"	"32992"	"32992"	"32968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.4"	""	"28.0"	""	"32.1"	""	"32.0"	"0.7"	"37.0"	"43.2"	""	"1019"	"29"	"37.000"	"30.000"	"0.0688880970947485"	"24"	"0.0001686"	"0.00145"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIPEEALYK"	"[R].nEIPEEALYk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"555.31500"	"1663.93045"	"1663.93071"	"-0.15"	"-0.00008"	"5/98"	"5"	"98"	"615013.933105469"	"HCD"	"MS2"	"27.85081"	"24.9"	"100.000"	"88.5653"	"30982"	"30982"	"30962"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"25.8"	""	"30.1"	""	"47.3"	"1.0"	"55.2"	"49.3"	""	"1019"	"27"	"37.000"	"30.000"	"0.100494938405052"	"19"	"9.9E-05"	"0.0005742"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"832.46887"	"1663.93047"	"1663.93071"	"-0.14"	"-0.00012"	"8/84"	"8"	"84"	"131722.313110352"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"93.5750"	"32961"	"32961"	"32935"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"14.0"	""	"14.5"	""	"16.9"	""	"22.9"	"23.6"	""	"1019"	"22"	"37.000"	"30.000"	"0.329719162723903"	"14"	"0.004234"	"0.04832"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"832.46906"	"1663.93083"	"1663.93071"	"0.08"	"0.00006"	"12/84"	"12"	"84"	"236112.651489258"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"93.7963"	"33086"	"33086"	"33062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"22.9"	""	"22.8"	""	"29.2"	""	"39.4"	"45.7"	""	"1025"	"32"	"37.000"	"30.000"	"0.0339385958147153"	"20"	"0.0001991"	"0.00386"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIPEEALYK"	"[R].nEIPEEALYk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"832.46918"	"1663.93108"	"1663.93071"	"0.22"	"0.00018"	"12/98"	"12"	"98"	"270656.891174316"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"88.6379"	"30972"	"30972"	"30951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.8"	""	"25.0"	""	"19.4"	""	"46.7"	"0.1"	"45.0"	"50.8"	""	"1022"	"39"	"37.000"	"30.000"	"0.00635946966615178"	"17"	"0.0001686"	"0.001547"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDEINPETK"	"[K].lFDEINPETk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"832.46924"	"1663.93120"	"1663.93071"	"0.30"	"0.00025"	"5/92"	"5"	"92"	"117030.923583984"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"104.4819"	"37392"	"37392"	"37373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"10.7"	""	"8.6"	""	"21.3"	""	"16.3"	"16.2"	""	"1026"	"28"	"37.000"	"30.000"	"0.078183906269801"	"16"	"0.001261"	"0.01009"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"2"	"2"	"0.7805"	"0.0000"	"1"	"1"	"1"	"832.46948"	"1663.93169"	"1663.93071"	"0.59"	"0.00049"	"6/84"	"6"	"84"	"144107.298339844"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"93.4914"	"32963"	"32963"	"32940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"15.1"	""	"20.0"	""	"16.0"	""	"24.8"	"23.3"	""	"1023"	"41"	"37.000"	"30.000"	"0.0039980262204693"	"25"	"0.0001991"	"0.003661"	"0.332"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPDIYQIAK"	"[R].eEPDIYQIAk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"555.31573"	"1663.93265"	"1663.93071"	"1.17"	"0.00065"	"9/84"	"9"	"84"	"743161.291015625"	"HCD"	"MS2"	"14.51156"	"23.2"	"100.000"	"93.6812"	"33004"	"33004"	"32980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.5"	""	"22.5"	""	"34.2"	""	"29.3"	""	"49.7"	"49.0"	""	"1031"	"24"	"37.000"	"30.000"	"0.186736265683808"	"22"	"0.0009352"	"0.008378"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPINEEALEK"	"[R].yPINEEALEk.[I]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"0.5909"	"0.0000"	"1"	"1"	"1"	"832.47003"	"1663.93279"	"1663.93071"	"1.25"	"0.00104"	"5/92"	"5"	"92"	"183874.227172852"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"89.6026"	"31360"	"31360"	"31341"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"20.1"	""	"18.9"	""	"31.7"	""	"25.4"	"33.6"	""	"1031"	"22"	"37.000"	"30.000"	"0.359110968024101"	"23"	"0.006157"	"0.07499"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEIPEEALYK"	"[R].nEIPEEALYk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"P11505"	"Plasma membrane calcium-transporting ATPase 1 OS=Rattus norvegicus OX=10116 GN=Atp2b1 PE=1 SV=3"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"832.47015"	"1663.93303"	"1663.93071"	"1.40"	"0.00116"	"10/98"	"10"	"98"	"223677.097351074"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"88.6480"	"31016"	"31016"	"30991"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.5"	""	"19.3"	""	"22.7"	""	"30.9"	""	"43.1"	"43.1"	""	"1032"	"29"	"37.000"	"30.000"	"0.0657127589804597"	"19"	"0.001615"	"0.01397"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDEINPETK"	"[K].lFDEINPETk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"Q62975"	"Protein Z-dependent protease inhibitor OS=Rattus norvegicus OX=10116 GN=Serpina10 PE=2 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"555.31622"	"1663.93412"	"1663.93071"	"2.05"	"0.00114"	"4/92"	"4"	"92"	"297027.824523926"	"HCD"	"MS2"	"40.63733"	"12.7"	"100.000"	"104.2998"	"37301"	"37301"	"37286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"19.0"	""	"18.4"	""	"23.6"	""	"21.0"	"20.2"	""	"1015"	"17"	"37.000"	"30.000"	"0.915031503486231"	"15"	"0.0001991"	"0.002875"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"832.94989"	"1664.89250"	"1664.89294"	"-0.26"	"-0.00022"	"9/94"	"9"	"94"	"181525.449035645"	"HCD"	"MS2"	"18.52343"	"16.4"	"100.000"	"58.4616"	"18791"	"18791"	"18763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.1"	""	"11.7"	""	"16.4"	""	"44.0"	""	"33.6"	"35.4"	""	"1071"	"18"	"37.000"	"30.000"	"0.945713252977441"	"26"	"0.004751"	"0.0562"	"0.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"832.95020"	"1664.89311"	"1664.89294"	"0.10"	"0.00009"	"8/94"	"8"	"94"	"232728.805969238"	"HCD"	"MS2"	"0"	"22.2"	"100.000"	"58.7863"	"18923"	"18923"	"18903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.6"	""	"21.1"	""	"19.0"	""	"49.2"	""	"54.5"	"45.3"	""	"1074"	"9"	"37.000"	"30.000"	"7.1281082380087"	"13"	"0.008135"	"0.1034"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"832.95026"	"1664.89324"	"1664.89294"	"0.18"	"0.00015"	"8/94"	"8"	"94"	"297509.448730469"	"HCD"	"MS2"	"10.88547"	"25.3"	"100.000"	"59.0281"	"18986"	"18986"	"18965"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"24.1"	""	"16.3"	""	"62.5"	""	"61.8"	"50.5"	""	"1076"	"47"	"37.000"	"30.000"	"0.001171607857526"	"28"	"0.0001991"	"0.002035"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQMVQEDLEK"	"[K].aQmVQEDLEk.[T]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"0"	"2"	"2"	"0.7241"	"0.0000"	"1"	"1"	"1"	"832.95026"	"1664.89324"	"1664.89294"	"0.18"	"0.00015"	"11/94"	"11"	"94"	"239260.895141602"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"58.7011"	"18853"	"18853"	"18826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"15.0"	""	"12.8"	""	"53.2"	""	"41.0"	"47.4"	""	"1076"	"29"	"37.000"	"30.000"	"0.0732457239166682"	"22"	"0.002035"	"0.01823"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"555.65588"	"1664.95310"	"1664.95448"	"-0.83"	"-0.00046"	"9/84"	"9"	"84"	"323581.672668457"	"HCD"	"MS2"	"28.18504"	"12.6"	"100.000"	"111.6058"	"40160"	"40160"	"40135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"15.6"	""	"19.0"	""	"23.4"	""	"21.6"	"24.8"	""	"936"	"16"	"36.000"	"29.000"	"1.09962816015701"	"14"	"0.001951"	"0.01703"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"832.98047"	"1664.95366"	"1664.95448"	"-0.49"	"-0.00041"	"11/84"	"11"	"84"	"151384.594299316"	"HCD"	"MS2"	"8.176566"	"13.9"	"100.000"	"111.6658"	"40198"	"40198"	"40172"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"15.8"	""	"22.0"	""	"15.6"	"1.7"	"26.1"	"29.3"	""	"929"	"36"	"36.000"	"29.000"	"0.0130312392482857"	"17"	"0.000264"	"0.006062"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEMTk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8226"	"0.0000"	"1"	"1"	"1"	"832.98090"	"1664.95452"	"1664.95448"	"0.02"	"0.00002"	"7/84"	"7"	"84"	"309382.642089844"	"HCD"	"MS2"	"15.11452"	"26.5"	"100.000"	"111.5641"	"40143"	"40143"	"40119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.3"	""	"35.8"	""	"48.1"	""	"30.1"	""	"47.8"	"51.9"	""	"925"	"62"	"36.000"	"29.000"	"2.96559429170637E-05"	"27"	"0"	"6.163E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDEYDYLFK"	"[R].dDEYDYLFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.6957"	"0.0000"	"1"	"1"	"1"	"833.42468"	"1665.84209"	"1665.84122"	"0.52"	"0.00043"	"8/72"	"8"	"72"	"253720.951049805"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"110.2583"	"39625"	"39625"	"39597"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.9"	""	"20.3"	""	"17.9"	""	"50.5"	""	"58.7"	"61.6"	""	"879"	"46"	"36.000"	"29.000"	"0.00116938866378158"	"29"	"0"	"0.0002098"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDEYDYLFK"	"[R].dDEYDYLFk.[V]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"0"	"2"	"2"	"0.7353"	"0.0000"	"1"	"1"	"1"	"833.42493"	"1665.84258"	"1665.84122"	"0.81"	"0.00068"	"7/72"	"7"	"72"	"240713.839599609"	"HCD"	"MS2"	"19.40749"	"25.5"	"100.000"	"110.0897"	"39543"	"39543"	"39519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"21.1"	""	"19.1"	""	"46.0"	"1.3"	"71.7"	"56.4"	""	"901"	"34"	"36.000"	"29.000"	"0.0195746855989293"	"23"	"0"	"0.0002821"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8095"	"0.0000"	"1"	"1"	"1"	"833.93445"	"1666.86162"	"1666.86231"	"-0.41"	"-0.00035"	"16/88"	"16"	"88"	"1340037.68847656"	"HCD"	"MS2"	"0"	"115.9"	"100.000"	"42.7732"	"12385"	"12385"	"12362"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"244.1"	""	"162.3"	""	"181.2"	""	"118.6"	""	"192.8"	"196.8"	""	"1007"	"42"	"37.000"	"30.000"	"0.00319153399617863"	"23"	"0"	"3.561E-05"	"0.746"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"556.29211"	"1666.86179"	"1666.86231"	"-0.31"	"-0.00017"	"6/88"	"6"	"88"	"9539458.13525391"	"HCD"	"MS2"	"37.26788"	"427.5"	"100.000"	"42.5360"	"12322"	"12322"	"12303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"650.4"	""	"541.8"	""	"556.0"	""	"666.0"	""	"782.0"	"857.6"	""	"1008"	"23"	"37.000"	"30.000"	"0.258482137531648"	"18"	"9.9E-05"	"0.0007511"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"833.93463"	"1666.86199"	"1666.86231"	"-0.20"	"-0.00016"	"15/88"	"15"	"88"	"1138840.53533936"	"HCD"	"MS2"	"0"	"104.5"	"100.000"	"42.6213"	"12357"	"12357"	"12335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.6"	""	"155.2"	""	"161.4"	""	"118.9"	""	"153.1"	"187.1"	""	"1011"	"35"	"37.000"	"30.000"	"0.0174470160234276"	"20"	"0"	"6.415E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"833.93475"	"1666.86223"	"1666.86231"	"-0.05"	"-0.00004"	"4/88"	"4"	"88"	"118767.34362793"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"43.1158"	"12525"	"12525"	"12498"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"15.6"	""	"17.2"	""	"18.7"	""	"20.7"	"25.2"	""	"1012"	"4"	"37.000"	"30.000"	"21.8348652874849"	"15"	"0.0073"	"0.09247"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.93481"	"1666.86235"	"1666.86231"	"0.02"	"0.00002"	"15/88"	"15"	"88"	"334711.972595215"	"HCD"	"MS2"	"0"	"30.2"	"100.000"	"42.2969"	"12225"	"12225"	"12199"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.1"	""	"46.0"	""	"46.6"	""	"28.7"	""	"52.3"	"47.5"	""	"1012"	"35"	"37.000"	"30.000"	"0.0179535574952189"	"15"	"0.0001686"	"0.001538"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mNGQPQENYk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"833.93500"	"1666.86272"	"1666.86231"	"0.24"	"0.00020"	"13/88"	"13"	"88"	"352692.892578125"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"42.4742"	"12263"	"12263"	"12240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.0"	""	"55.9"	""	"45.6"	""	"41.2"	""	"57.3"	"62.7"	""	"1006"	"28"	"37.000"	"30.000"	"0.0819535904417781"	"14"	"0.0001991"	"0.003727"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSPSTLVSTGSSSR"	"[K].aTSPSTLVSTGSSSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"833.94360"	"1666.87993"	"1666.88091"	"-0.59"	"-0.00049"	"13/136"	"13"	"136"	"529479.75390625"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"43.5458"	"12701"	"12701"	"12672"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"22.0"	""	"26.6"	""	"78.0"	""	"64.6"	"44.2"	""	"1062"	"70"	"37.000"	"30.000"	"5.32224081419366E-06"	"22"	"0"	"1.029E-06"	"1.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATSPSTLVSTGSSSR"	"[K].aTSPSTLVSTGSSSR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9403"	"0.0000"	"1"	"1"	"1"	"833.94507"	"1666.88286"	"1666.88091"	"1.17"	"0.00098"	"12/136"	"12"	"136"	"368495.099304199"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"43.2562"	"12617"	"12617"	"12587"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"16.4"	""	"17.0"	""	"52.8"	"1.3"	"50.4"	"30.6"	""	"1061"	"67"	"37.000"	"30.000"	"1.09568417265749E-05"	"21"	"0"	"3.661E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVTEFEDIK"	"[R].vEVTEFEDIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"833.96857"	"1666.92986"	"1666.93037"	"-0.31"	"-0.00026"	"8/84"	"8"	"84"	"164494.79498291"	"HCD"	"MS2"	"31.95215"	"13.6"	"100.000"	"106.8255"	"38321"	"38321"	"38299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.9"	""	"23.2"	""	"21.1"	""	"21.9"	""	"25.7"	"19.5"	""	"1064"	"15"	"37.000"	"30.000"	"1.59555446010143"	"16"	"0.003317"	"0.03719"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEVTEFEDIK"	"[R].vEVTEFEDIk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"833.96869"	"1666.93010"	"1666.93037"	"-0.16"	"-0.00014"	"6/84"	"6"	"84"	"149372.536376953"	"HCD"	"MS2"	"30.66659"	"12.8"	"100.000"	"106.4780"	"38164"	"38164"	"38144"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.9"	""	"18.5"	""	"18.0"	""	"21.6"	""	"19.8"	"23.7"	""	"1064"	"5"	"37.000"	"30.000"	"18.0680645018097"	"16"	"0.006777"	"0.08448"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLGEGPVERPGAR"	"[R].sLLGEGPVERPGAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.31903"	"1666.94254"	"1666.94378"	"-0.75"	"-0.00041"	"6/128"	"6"	"128"	"1158776.77478027"	"HCD"	"MS2"	"43.23113"	"60.6"	"100.000"	"50.2540"	"15458"	"15458"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.0"	""	"78.5"	""	"76.2"	""	"84.5"	""	"123.3"	"121.2"	""	"990"	"4"	"36.000"	"29.000"	"21.4094346362329"	"13"	"9.9E-05"	"0.0006137"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLLGEGPVERPGAR"	"[R].sLLGEGPVERPGAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"O08653"	"Telomerase protein component 1 OS=Rattus norvegicus OX=10116 GN=Tep1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"556.31970"	"1666.94455"	"1666.94378"	"0.46"	"0.00026"	"7/128"	"7"	"128"	"1004881.95056152"	"HCD"	"MS2"	"43.33009"	"46.3"	"100.000"	"50.5750"	"15554"	"15554"	"15526"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.1"	""	"60.4"	""	"57.8"	""	"71.5"	"0.8"	"99.0"	"85.1"	""	"994"	"2"	"36.000"	"29.000"	"29.0640671819807"	"13"	"9.9E-05"	"0.0005909"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.60596"	"1667.80332"	"1667.80491"	"-0.95"	"-0.00053"	"6/102"	"6"	"102"	"1037367.60028076"	"HCD"	"MS2"	"15.76069"	"21.7"	"100.000"	"69.0106"	"23070"	"23070"	"23045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.2"	""	"29.5"	""	"27.3"	""	"34.7"	""	"41.8"	"44.5"	""	"598"	"24"	"34.000"	"27.000"	"0.128727456537021"	"14"	"0.0001686"	"0.001507"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9571"	"0.0000"	"1"	"1"	"1"	"556.60626"	"1667.80423"	"1667.80491"	"-0.40"	"-0.00022"	"8/102"	"8"	"102"	"2968181.16778564"	"HCD"	"MS2"	"25.67515"	"37.0"	"100.000"	"68.9701"	"23019"	"23019"	"23001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.2"	""	"45.1"	""	"38.1"	""	"71.3"	""	"77.6"	"71.0"	""	"613"	"70"	"34.000"	"27.000"	"3.36845289786067E-06"	"20"	"0"	"1.103E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"556.60632"	"1667.80442"	"1667.80491"	"-0.29"	"-0.00016"	"7/102"	"7"	"102"	"2495235.16827393"	"HCD"	"MS2"	"7.420438"	"33.5"	"100.000"	"69.2763"	"23144"	"23144"	"23124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.1"	""	"36.7"	""	"41.0"	""	"58.3"	"1.3"	"70.1"	"64.8"	""	"611"	"54"	"34.000"	"27.000"	"0.000133048877410941"	"19"	"0"	"1.96E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"556.60663"	"1667.80533"	"1667.80491"	"0.25"	"0.00014"	"8/102"	"8"	"102"	"3166771.71716309"	"HCD"	"MS2"	"8.01041"	"34.4"	"100.000"	"69.3285"	"23199"	"23199"	"23183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.3"	""	"35.0"	""	"39.8"	""	"61.1"	"0.4"	"77.5"	"64.9"	""	"611"	"74"	"34.000"	"27.000"	"1.10920345732266E-06"	"21"	"0"	"1.258E-07"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"556.61951"	"1667.84397"	"1667.84633"	"-1.42"	"-0.00079"	"9/88"	"9"	"88"	"2455205.8651123"	"HCD"	"MS2"	"64.07131"	"78.9"	"100.000"	"47.1216"	"14186"	"14186"	"14161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.7"	""	"110.9"	""	"105.2"	""	"117.1"	"0.1"	"136.7"	"139.4"	""	"879"	"16"	"36.000"	"29.000"	"1.12191222251962"	"16"	"0.0005161"	"0.00685"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"834.42639"	"1667.84551"	"1667.84633"	"-0.49"	"-0.00041"	"12/88"	"12"	"88"	"311093.291137695"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"45.9493"	"13714"	"13714"	"13685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.5"	""	"40.0"	""	"54.5"	""	"37.8"	"0.3"	"55.6"	"53.2"	""	"882"	"27"	"36.000"	"29.000"	"0.0817407445925931"	"15"	"0.0001991"	"0.005394"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6000"	"0.0000"	"1"	"1"	"1"	"834.42651"	"1667.84575"	"1667.84633"	"-0.35"	"-0.00029"	"5/88"	"5"	"88"	"232913.043212891"	"HCD"	"MS2"	"0"	"24.8"	"100.000"	"46.3457"	"13840"	"13840"	"13825"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.1"	""	"32.2"	""	"37.6"	""	"30.7"	""	"36.7"	"41.8"	""	"875"	"25"	"36.000"	"29.000"	"0.128818446478696"	"16"	"0.0003294"	"0.006166"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.6286"	"0.0000"	"1"	"1"	"1"	"834.42664"	"1667.84599"	"1667.84633"	"-0.20"	"-0.00017"	"11/88"	"11"	"88"	"346538.353210449"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"47.4506"	"14282"	"14282"	"14258"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.5"	""	"41.7"	""	"51.8"	""	"34.2"	"1.8"	"52.9"	"45.5"	""	"877"	"35"	"36.000"	"29.000"	"0.0144533858789815"	"15"	"0.0001991"	"0.00305"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"834.42676"	"1667.84624"	"1667.84633"	"-0.05"	"-0.00004"	"8/88"	"8"	"88"	"441972.273254395"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"47.0456"	"14155"	"14155"	"14129"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.4"	""	"49.3"	""	"56.5"	""	"44.5"	""	"63.4"	"65.0"	""	"879"	"44"	"36.000"	"29.000"	"0.00166325515983162"	"15"	"9.9E-05"	"0.0009382"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.3673"	"0.0000"	"1"	"1"	"1"	"834.42676"	"1667.84624"	"1667.84633"	"-0.05"	"-0.00004"	"13/88"	"13"	"88"	"387078.357177734"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"47.1379"	"14155"	"14155"	"14132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.4"	""	"46.8"	""	"55.0"	""	"37.9"	"1.0"	"49.1"	"53.3"	""	"879"	"49"	"36.000"	"29.000"	"0.000601116818849375"	"17"	"9.9E-05"	"0.0008039"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"834.42725"	"1667.84722"	"1667.84633"	"0.53"	"0.00044"	"7/88"	"7"	"88"	"270417.155822754"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"46.7331"	"14028"	"14028"	"14003"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.6"	""	"32.8"	""	"41.1"	""	"36.0"	""	"35.5"	"35.9"	""	"894"	"37"	"36.000"	"29.000"	"0.00968963734854403"	"16"	"0.0001686"	"0.001679"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLDPPLDLNSDR"	"[K].aLLDPPLDLNSDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"834.46222"	"1667.91716"	"1667.91657"	"0.36"	"0.00030"	"4/118"	"4"	"118"	"131858.043579102"	"HCD"	"MS2"	"26.46483"	"6.0"	"100.000"	"109.6877"	"39396"	"39396"	"39383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.1"	""	"9.1"	""	"7.9"	""	"10.2"	""	"12.5"	"9.8"	""	"1009"	"9"	"37.000"	"30.000"	"5.79243502045177"	"17"	"0.0007053"	"0.00724"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALLDPPLDLNSDR"	"[K].aLLDPPLDLNSDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"834.46259"	"1667.91789"	"1667.91657"	"0.80"	"0.00066"	"5/118"	"5"	"118"	"93259.9622802734"	"HCD"	"MS2"	"23.58846"	"4.5"	"100.000"	"109.4278"	"39284"	"39284"	"39267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.0"	""	"6.1"	""	"4.7"	""	"9.2"	""	"11.4"	"7.0"	""	"999"	"4"	"36.000"	"29.000"	"21.3567661632717"	"14"	"0.00511"	"0.06511"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVVTLEGHTK"	"[R].ePVVTLEGHTk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.66187"	"1667.97104"	"1667.97324"	"-1.32"	"-0.00073"	"14/98"	"14"	"98"	"5731198.51086426"	"HCD"	"MS2"	"10.2415"	"138.5"	"100.000"	"52.8693"	"16518"	"16518"	"16498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.4"	""	"125.3"	""	"119.2"	""	"241.0"	""	"325.4"	"329.6"	""	"681"	"69"	"35.000"	"28.000"	"3.86471182736423E-06"	"17"	"0"	"3.866E-07"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVVTLEGHTK"	"[R].ePVVTLEGHTk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"556.66205"	"1667.97159"	"1667.97324"	"-0.99"	"-0.00055"	"8/98"	"8"	"98"	"2601773.7098999"	"HCD"	"MS2"	"22.33582"	"81.8"	"100.000"	"52.5558"	"16390"	"16390"	"16372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.6"	""	"80.6"	""	"83.8"	""	"138.2"	"0.0"	"200.1"	"178.1"	""	"694"	"44"	"35.000"	"28.000"	"0.00127446958272835"	"17"	"0"	"2.884E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVVTLEGHTK"	"[R].ePVVTLEGHTk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.66217"	"1667.97196"	"1667.97324"	"-0.77"	"-0.00043"	"14/98"	"14"	"98"	"3650839.95697021"	"HCD"	"MS2"	"36.9139"	"96.6"	"100.000"	"52.9356"	"16511"	"16511"	"16491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.7"	""	"83.0"	""	"83.9"	""	"168.0"	""	"231.0"	"222.1"	""	"694"	"61"	"35.000"	"28.000"	"2.68738243837474E-05"	"16"	"0"	"3.345E-07"	"1.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVVTLEGHTK"	"[R].ePVVTLEGHTk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.66229"	"1667.97232"	"1667.97324"	"-0.55"	"-0.00031"	"14/98"	"14"	"98"	"5665687.45928955"	"HCD"	"MS2"	"8.77564"	"137.0"	"100.000"	"53.2416"	"16636"	"16636"	"16618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.5"	""	"117.3"	""	"121.9"	""	"230.0"	""	"321.1"	"327.8"	""	"696"	"67"	"35.000"	"28.000"	"7.70156958942761E-06"	"17"	"0"	"5.366E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPVVTLEGHTK"	"[R].ePVVTLEGHTk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"Q91ZN1"	"Coronin-1A OS=Rattus norvegicus OX=10116 GN=Coro1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.66235"	"1667.97251"	"1667.97324"	"-0.44"	"-0.00024"	"10/98"	"10"	"98"	"915528.072937012"	"HCD"	"MS2"	"20.89853"	"38.2"	"100.000"	"53.1889"	"16649"	"16649"	"16625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.0"	""	"38.0"	""	"41.5"	""	"63.6"	""	"82.0"	"87.8"	""	"687"	"34"	"35.000"	"28.000"	"0.0134873535309762"	"15"	"0"	"1.676E-05"	"0.813"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTAEMSSILEER"	"[K].tGTAEmSSILEER.[I]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"834.91882"	"1668.83037"	"1668.83118"	"-0.49"	"-0.00041"	"6/118"	"6"	"118"	"78418.6768798828"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"49.6408"	"15173"	"15173"	"15148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.1"	""	"2.9"	""	"6.6"	""	"9.3"	""	"9.9"	"9.3"	""	"777"	"13"	"35.000"	"28.000"	"1.82553861193126"	"14"	"0.00511"	"0.06472"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"834.94342"	"1668.87956"	"1668.88449"	"-2.95"	"-0.00246"	"8/114"	"8"	"114"	"160204.15045166"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"64.2688"	"21145"	"21145"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"18.9"	""	"20.9"	""	"25.8"	""	"26.6"	"23.3"	""	"988"	"54"	"36.000"	"29.000"	"0.00020404546598314"	"26"	"9.9E-05"	"0.0004857"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTVASPAEFVTR"	"[R].dFTVASPAEFVTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.94385"	"1668.88042"	"1668.87945"	"0.58"	"0.00048"	"6/118"	"6"	"118"	"109673.829101563"	"HCD"	"MS2"	"29.83371"	"4.9"	"100.000"	"108.3832"	"38916"	"38916"	"38908"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.2"	""	"9.5"	""	"7.3"	""	"7.3"	""	"7.2"	"11.7"	""	"983"	"4"	"36.000"	"29.000"	"19.5669674327044"	"13"	"0.007379"	"0.09341"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"834.94397"	"1668.88066"	"1668.88449"	"-2.29"	"-0.00191"	"16/114"	"16"	"114"	"416645.615722656"	"HCD"	"MS2"	"0"	"37.7"	"100.000"	"63.9778"	"21028"	"21028"	"21009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"51.9"	""	"49.5"	""	"56.5"	"0.2"	"78.7"	"62.7"	""	"984"	"70"	"36.000"	"29.000"	"5.46972009822542E-06"	""	"0"	"1.986E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"834.94415"	"1668.88103"	"1668.88449"	"-2.07"	"-0.00173"	"16/114"	"16"	"114"	"414473.47088623"	"HCD"	"MS2"	"0"	"38.2"	"100.000"	"63.9791"	"20996"	"20996"	"20984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.2"	""	"41.6"	""	"52.1"	""	"55.6"	""	"80.9"	"75.2"	""	"997"	"58"	"36.000"	"29.000"	"8.66293713131563E-05"	"27"	"0"	"5.383E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"556.96564"	"1668.88236"	"1668.88449"	"-1.28"	"-0.00071"	"13/114"	"13"	"114"	"1969912.12774658"	"HCD"	"MS2"	"39.49472"	"58.3"	"100.000"	"64.0662"	"21031"	"21031"	"21014"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.2"	"1.9"	"75.8"	""	"82.3"	""	"78.7"	"2.1"	"125.5"	"105.5"	""	"968"	"44"	"36.000"	"29.000"	"0.00178996839013649"	"18"	"0"	"5.713E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"556.96588"	"1668.88309"	"1668.88449"	"-0.84"	"-0.00047"	"10/114"	"10"	"114"	"1975920.8571167"	"HCD"	"MS2"	"17.86345"	"57.0"	"100.000"	"63.9755"	"21027"	"21027"	"21009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.3"	""	"77.8"	""	"78.8"	""	"90.2"	"3.7"	"105.0"	"102.2"	""	"986"	"39"	"36.000"	"29.000"	"0.00691587156349046"	"19"	"0"	"3.884E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYDEELEER"	"[K].kYDEELEER.[L]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"1"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"556.96600"	"1668.88346"	"1668.88449"	"-0.62"	"-0.00034"	"8/90"	"8"	"90"	"4890279.93054199"	"HCD"	"MS2"	"0"	"207.9"	"100.000"	"40.9729"	"11691"	"11691"	"11679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"413.4"	""	"178.0"	""	"206.1"	""	"349.6"	"3.5"	"444.7"	"376.6"	""	"981"	"18"	"36.000"	"29.000"	"0.772038595020681"	"20"	"0.001488"	"0.01233"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAQTLYDAGEK"	"[K].dAQTLYDAGEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"556.96637"	"1668.88456"	"1668.88449"	"0.04"	"0.00002"	"12/114"	"12"	"114"	"1026784.76904297"	"HCD"	"MS2"	"0"	"35.9"	"100.000"	"64.2620"	"21142"	"21142"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"44.4"	""	"41.7"	""	"50.9"	"0.2"	"83.1"	"70.7"	""	"983"	"41"	"36.000"	"29.000"	"0.00437042349427182"	"22"	"0"	"0.0003121"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THGSEIINDLQGR"	"[R].tHGSEIINDLQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"556.96674"	"1668.88565"	"1668.88666"	"-0.60"	"-0.00034"	"15/122"	"15"	"122"	"1171317.0446167"	"HCD"	"MS2"	"49.40485"	"36.0"	"100.000"	"50.3667"	"15504"	"15504"	"15476"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.8"	""	"43.9"	""	"50.8"	""	"56.1"	"0.7"	"77.5"	"67.5"	""	"993"	"33"	"36.000"	"29.000"	"0.026663628689783"	"17"	"0"	"1.442E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"THGSEIINDLQGR"	"[R].tHGSEIINDLQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"Q62868"	"Rho-associated protein kinase 2 OS=Rattus norvegicus OX=10116 GN=Rock2 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"556.96698"	"1668.88639"	"1668.88666"	"-0.17"	"-0.00009"	"14/122"	"14"	"122"	"1296869.31494141"	"HCD"	"MS2"	"43.18482"	"43.5"	"100.000"	"50.6876"	"15600"	"15600"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.2"	""	"46.8"	""	"62.6"	""	"65.1"	""	"101.6"	"83.8"	""	"988"	"24"	"36.000"	"29.000"	"0.193520487291245"	"20"	"0"	"2.771E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDEYSLNSGK"	"[K].vVDEYSLNSGk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.97784"	"1668.91898"	"1668.92087"	"-1.13"	"-0.00063"	"7/98"	"7"	"98"	"432342.083251953"	"HCD"	"MS2"	"16.54059"	"19.2"	"100.000"	"75.6469"	"25730"	"25730"	"25707"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"24.5"	""	"29.0"	""	"27.6"	"0.5"	"40.7"	"38.9"	""	"952"	"21"	"36.000"	"29.000"	"0.424235446551663"	"14"	"0.0001991"	"0.003792"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDEYSLNSGK"	"[K].vVDEYSLNSGk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"556.97791"	"1668.91916"	"1668.92087"	"-1.02"	"-0.00057"	"10/98"	"10"	"98"	"746525.77520752"	"HCD"	"MS2"	"26.36211"	"27.4"	"100.000"	"75.5908"	"25738"	"25738"	"25713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.4"	""	"29.6"	""	"40.8"	""	"38.0"	""	"54.0"	"60.4"	""	"944"	"26"	"36.000"	"29.000"	"0.122445265892008"	"15"	"0.0001991"	"0.003269"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDEYSLNSGK"	"[K].vVDEYSLNSGk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"556.97809"	"1668.91971"	"1668.92087"	"-0.70"	"-0.00039"	"10/98"	"10"	"98"	"761676.814819336"	"HCD"	"MS2"	"77.17048"	"27.3"	"100.000"	"75.3431"	"25606"	"25606"	"25585"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"34.1"	""	"33.8"	""	"41.0"	""	"56.1"	"52.6"	""	"950"	"19"	"36.000"	"29.000"	"0.555512210734438"	"17"	"0.0001991"	"0.003256"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDEYSLNSGK"	"[K].vVDEYSLNSGk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"834.96350"	"1668.91973"	"1668.92087"	"-0.69"	"-0.00057"	"9/98"	"9"	"98"	"201904.442626953"	"HCD"	"MS2"	"100"	"19.7"	"100.000"	"75.5148"	"25707"	"25707"	"25681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"22.5"	""	"24.3"	""	"23.7"	""	"40.6"	"46.0"	""	"950"	"11"	"36.000"	"29.000"	"3.64496707446864"	"14"	"0.003661"	"0.04001"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVDEYSLNSGK"	"[K].vVDEYSLNSGk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"P05708"	"Hexokinase-1 OS=Rattus norvegicus OX=10116 GN=Hk1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.96472"	"1668.92217"	"1668.92087"	"0.78"	"0.00065"	"11/98"	"11"	"98"	"206885.31628418"	"HCD"	"MS2"	"12.94647"	"19.6"	"100.000"	"75.4306"	"25642"	"25642"	"25615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.7"	""	"27.4"	""	"24.5"	""	"24.6"	""	"34.2"	"41.8"	""	"920"	"25"	"36.000"	"29.000"	"0.131449164995247"	"14"	"9.9E-05"	"0.0005263"	"0.505"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98541"	"1668.94168"	"1668.94820"	"-3.90"	"-0.00217"	"9/138"	"9"	"138"	"2457171.7711792"	"HCD"	"MS2"	"75.12608"	"42.3"	"100.000"	"69.8474"	"23376"	"23376"	"23358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.0"	""	"51.5"	""	"47.3"	""	"78.8"	"0.7"	"85.1"	"95.5"	""	"842"	"40"	"36.000"	"29.000"	"0.00395623513747712"	"15"	"0"	"8.176E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9878"	"0.0000"	"1"	"1"	"1"	"556.98621"	"1668.94406"	"1668.94820"	"-2.48"	"-0.00138"	"10/138"	"10"	"138"	"3346976.29943848"	"HCD"	"MS2"	"24.73873"	"41.7"	"100.000"	"69.9945"	"23470"	"23470"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.1"	""	"48.8"	""	"42.6"	""	"80.7"	""	"95.4"	"86.1"	""	"856"	"82"	"36.000"	"29.000"	"2.81477554388121E-07"	"19"	"0"	"3.333E-07"	"1.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9610"	"0.0000"	"1"	"1"	"1"	"556.98700"	"1668.94645"	"1668.94820"	"-1.05"	"-0.00059"	"10/138"	"10"	"138"	"3548287.10144043"	"HCD"	"MS2"	"6.064905"	"17.8"	"100.000"	"78.3264"	"26840"	"26840"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"23.8"	""	"22.1"	""	"26.5"	""	"34.3"	"38.6"	""	"847"	"77"	"36.000"	"29.000"	"8.27662759520878E-07"	"21"	"0"	"1.653E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"834.97687"	"1668.94646"	"1668.94820"	"-1.04"	"-0.00087"	"11/138"	"11"	"138"	"69420644.9775391"	"HCD"	"MS2"	"0"	"230.1"	"11.988"	"76.8038"	"26201"	"26201"	"26184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"403.7"	""	"322.1"	""	"280.2"	""	"331.6"	"1.0"	"438.9"	"401.9"	""	"847"	"62"	"36.000"	"29.000"	"2.76600789046204E-05"	"22"	"0"	"1.204E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"834.97699"	"1668.94670"	"1668.94820"	"-0.90"	"-0.00075"	"12/138"	"12"	"138"	"93158448.9760742"	"HCD"	"MS2"	"0"	"323.7"	"14.174"	"77.0695"	"26306"	"26306"	"26296"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"553.9"	""	"457.3"	""	"400.7"	""	"468.9"	"2.8"	"622.8"	"559.3"	""	"837"	"75"	"36.000"	"29.000"	"1.25514951419633E-06"	"23"	"0"	"2.675E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9872"	"0.0000"	"1"	"1"	"1"	"556.98712"	"1668.94681"	"1668.94820"	"-0.83"	"-0.00046"	"10/138"	"10"	"138"	"1345941.47631836"	"HCD"	"MS2"	"16.88703"	"17.6"	"100.000"	"79.4281"	"27261"	"27261"	"27243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"21.1"	""	"24.4"	""	"31.9"	""	"35.2"	"32.3"	""	"837"	"78"	"36.000"	"29.000"	"6.10513767925233E-07"	"19"	"0"	"3.046E-07"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"834.97705"	"1668.94682"	"1668.94820"	"-0.82"	"-0.00069"	"7/138"	"7"	"138"	"212084.742858887"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"79.4304"	"27262"	"27262"	"27243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"14.7"	""	"10.3"	""	"14.3"	""	"15.8"	"17.5"	""	"837"	"49"	"36.000"	"29.000"	"0.000552962222907082"	"19"	"0"	"0.0002028"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"834.97717"	"1668.94707"	"1668.94820"	"-0.68"	"-0.00057"	"12/138"	"12"	"138"	"1058150.36016846"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"76.5231"	"26086"	"26086"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.0"	""	"46.7"	""	"46.5"	""	"51.4"	""	"68.2"	"59.9"	""	"837"	"64"	"36.000"	"29.000"	"1.4883170682112E-05"	"23"	"0"	"1.938E-07"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"834.97717"	"1668.94707"	"1668.94820"	"-0.68"	"-0.00057"	"12/138"	"12"	"138"	"24089711.2182617"	"HCD"	"MS2"	"0"	"159.3"	"25.705"	"77.6980"	"26585"	"26585"	"26575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.6"	""	"208.0"	""	"194.8"	""	"235.8"	"0.8"	"315.2"	"302.8"	""	"837"	"74"	"36.000"	"29.000"	"1.74058590491748E-06"	"23"	"0"	"2.554E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"556.98724"	"1668.94718"	"1668.94820"	"-0.61"	"-0.00034"	"12/138"	"12"	"138"	"812248.588012695"	"HCD"	"MS2"	"30.93128"	"20.7"	"100.000"	"82.3305"	"28468"	"28468"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.2"	""	"20.2"	""	"21.5"	""	"36.1"	""	"47.3"	"39.6"	""	"837"	"15"	"36.000"	"29.000"	"1.35423945425049"	"17"	"0"	"0.0003205"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98724"	"1668.94718"	"1668.94820"	"-0.61"	"-0.00034"	"10/138"	"10"	"138"	"1684966.16339111"	"HCD"	"MS2"	"18.12274"	"11.9"	"100.000"	"78.9393"	"27089"	"27089"	"27073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"18.3"	""	"16.1"	""	"18.9"	""	"25.6"	"21.1"	""	"837"	"75"	"36.000"	"29.000"	"1.2843857021417E-06"	"17"	"0"	"2.411E-07"	"1.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9398"	"0.0000"	"1"	"1"	"1"	"556.98724"	"1668.94718"	"1668.94820"	"-0.61"	"-0.00034"	"10/138"	"10"	"138"	"2284272.4932251"	"HCD"	"MS2"	"8.474228"	"13.6"	"100.000"	"78.4991"	"26883"	"26883"	"26866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.0"	""	"20.1"	""	"19.6"	""	"19.6"	"1.2"	"28.2"	"22.1"	""	"837"	"83"	"36.000"	"29.000"	"2.15127268187245E-07"	"23"	"0"	"2.558E-07"	"1.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9455"	"0.0000"	"1"	"1"	"1"	"834.97729"	"1668.94731"	"1668.94820"	"-0.53"	"-0.00044"	"12/138"	"12"	"138"	"1054385.84777832"	"HCD"	"MS2"	"7.034778"	"36.1"	"100.000"	"76.6211"	"26157"	"26157"	"26137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"55.1"	""	"38.4"	""	"54.7"	"0.7"	"80.6"	"59.1"	""	"838"	"55"	"36.000"	"29.000"	"0.000128592021313589"	"19"	"0"	"1.453E-06"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9870"	"0.0000"	"1"	"1"	"1"	"556.98730"	"1668.94736"	"1668.94820"	"-0.50"	"-0.00028"	"10/138"	"10"	"138"	"1694229.82489014"	"HCD"	"MS2"	"12.00548"	"12.8"	"100.000"	"78.8176"	"27013"	"27013"	"26993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"16.2"	""	"16.6"	""	"23.4"	""	"25.8"	"23.3"	""	"835"	"77"	"36.000"	"29.000"	"8.46557535400134E-07"	"18"	"0"	"3.538E-08"	"1.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"556.98730"	"1668.94736"	"1668.94820"	"-0.50"	"-0.00028"	"10/138"	"10"	"138"	"3787581.36566162"	"HCD"	"MS2"	"6.039262"	"18.2"	"100.000"	"78.1972"	"26760"	"26760"	"26742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"26.9"	""	"19.9"	""	"32.2"	""	"33.8"	"36.2"	""	"835"	"80"	"36.000"	"29.000"	"4.06121965926882E-07"	"21"	"0"	"4.884E-08"	"1.335"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97736"	"1668.94744"	"1668.94820"	"-0.46"	"-0.00038"	"7/138"	"7"	"138"	"229426.354431152"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"80.6906"	"27775"	"27775"	"27752"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"9.4"	""	"18.9"	""	"17.6"	""	"40.5"	"22.5"	""	"835"	"44"	"36.000"	"29.000"	"0.0017086632543728"	"15"	"0"	"0.0003998"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9322"	"0.0000"	"1"	"1"	"1"	"834.97736"	"1668.94744"	"1668.94820"	"-0.46"	"-0.00038"	"17/138"	"17"	"138"	"539031.576660156"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"78.5040"	"26885"	"26885"	"26866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"27.6"	""	"19.3"	""	"25.3"	""	"32.4"	"31.4"	""	"835"	"59"	"36.000"	"29.000"	"5.03102505105226E-05"	"20"	"0"	"8.409E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"556.98737"	"1668.94754"	"1668.94820"	"-0.39"	"-0.00022"	"9/138"	"9"	"138"	"1272679.00958252"	"HCD"	"MS2"	"9.014322"	"13.0"	"100.000"	"79.2574"	"27219"	"27219"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"20.5"	""	"19.4"	""	"23.6"	""	"22.8"	"19.8"	""	"831"	"64"	"36.000"	"29.000"	"1.50858931756977E-05"	"18"	"0"	"6.462E-07"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8841"	"0.0000"	"1"	"1"	"1"	"834.97742"	"1668.94756"	"1668.94820"	"-0.39"	"-0.00032"	"11/138"	"11"	"138"	"19948741.8679199"	"HCD"	"MS2"	"0"	"183.1"	"35.614"	"77.6309"	"26530"	"26530"	"26516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.5"	""	"241.4"	""	"233.9"	""	"277.9"	""	"351.4"	"328.7"	""	"831"	"69"	"36.000"	"29.000"	"5.08828030794628E-06"	"25"	"0"	"8.4E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"834.97748"	"1668.94768"	"1668.94820"	"-0.31"	"-0.00026"	"6/138"	"6"	"138"	"166097.364624023"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"80.0965"	"27534"	"27534"	"27509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.6"	""	"9.3"	""	"11.4"	""	"12.6"	""	"15.0"	"13.3"	""	"830"	"35"	"36.000"	"29.000"	"0.01291362279899"	"17"	"0.0001991"	"0.004077"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"834.97748"	"1668.94768"	"1668.94820"	"-0.31"	"-0.00026"	"11/138"	"11"	"138"	"513252.896179199"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"78.6072"	"26954"	"26954"	"26935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	""	"27.2"	""	"20.2"	""	"24.9"	""	"38.6"	"33.6"	""	"830"	"57"	"36.000"	"29.000"	"8.5713276466137E-05"	"22"	"0"	"9.799E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"834.97748"	"1668.94768"	"1668.94820"	"-0.31"	"-0.00026"	"12/138"	"12"	"138"	"60597864.7421875"	"HCD"	"MS2"	"0"	"194.4"	"12.526"	"77.3468"	"26416"	"26416"	"26408"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"320.9"	""	"255.5"	""	"250.1"	""	"287.1"	"4.1"	"377.0"	"347.5"	""	"830"	"64"	"36.000"	"29.000"	"1.54898815485224E-05"	"22"	"0"	"2.288E-08"	"1.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9688"	"0.0000"	"1"	"1"	"1"	"556.98743"	"1668.94773"	"1668.94820"	"-0.28"	"-0.00016"	"11/138"	"11"	"138"	"310818.998657227"	"HCD"	"MS2"	"42.70366"	"10.9"	"100.000"	"83.8984"	"29070"	"29070"	"29049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.1"	""	"15.2"	""	"17.4"	""	"15.1"	""	"24.2"	"16.6"	""	"825"	"32"	"36.000"	"29.000"	"0.0292027636058457"	"16"	"0"	"1.301E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"834.97754"	"1668.94780"	"1668.94820"	"-0.24"	"-0.00020"	"12/138"	"12"	"138"	"61931258.1169434"	"HCD"	"MS2"	"0"	"228.0"	"14.522"	"77.4344"	"26480"	"26480"	"26474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"384.9"	""	"322.0"	""	"282.1"	""	"328.7"	"4.6"	"436.6"	"400.9"	""	"825"	"61"	"36.000"	"29.000"	"3.25404798517653E-05"	"22"	"0"	"1.873E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98749"	"1668.94791"	"1668.94820"	"-0.17"	"-0.00010"	"9/138"	"9"	"138"	"936681.797180176"	"HCD"	"MS2"	"21.4307"	"14.5"	"100.000"	"79.7490"	"27392"	"27392"	"27367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"19.4"	""	"23.0"	""	"20.9"	""	"28.2"	"28.4"	""	"825"	"58"	"36.000"	"29.000"	"7.21811759057671E-05"	"16"	"0"	"9.5E-07"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"556.98749"	"1668.94791"	"1668.94820"	"-0.17"	"-0.00010"	"10/138"	"10"	"138"	"2228186.76165771"	"HCD"	"MS2"	"8.689466"	"13.5"	"100.000"	"78.6464"	"26970"	"26970"	"26951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"16.6"	""	"21.8"	""	"23.8"	"1.5"	"25.0"	"24.2"	""	"825"	"75"	"36.000"	"29.000"	"1.4139171195041E-06"	"20"	"0"	"1.45E-07"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9419"	"0.0000"	"1"	"1"	"1"	"556.98749"	"1668.94791"	"1668.94820"	"-0.17"	"-0.00010"	"10/138"	"10"	"138"	"2824539.7487793"	"HCD"	"MS2"	"7.979223"	"21.1"	"100.000"	"76.5932"	"26146"	"26146"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"24.8"	""	"25.5"	""	"34.7"	"1.9"	"42.7"	"39.0"	""	"825"	"86"	"36.000"	"29.000"	"1.08748669665297E-07"	"23"	"0"	"4.053E-08"	"1.352"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9104"	"0.0000"	"1"	"1"	"1"	"834.97760"	"1668.94792"	"1668.94820"	"-0.17"	"-0.00014"	"11/138"	"11"	"138"	"101045232.418945"	"HCD"	"MS2"	"0"	"216.3"	"8.477"	"77.1800"	"26381"	"26381"	"26370"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"362.7"	""	"307.3"	""	"264.5"	""	"331.3"	""	"403.0"	"380.6"	""	"825"	"67"	"36.000"	"29.000"	"7.5235697720685E-06"	"23"	"0"	"2.02E-08"	"1.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"834.97766"	"1668.94805"	"1668.94820"	"-0.09"	"-0.00008"	"8/138"	"8"	"138"	"366437.918395996"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"78.9070"	"27076"	"27076"	"27062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"18.5"	""	"17.4"	""	"23.4"	""	"30.5"	"28.4"	""	"825"	"60"	"36.000"	"29.000"	"4.31940526070996E-05"	"24"	"0"	"9.795E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"834.97766"	"1668.94805"	"1668.94820"	"-0.09"	"-0.00008"	"13/138"	"13"	"138"	"648259.963623047"	"HCD"	"MS2"	"7.881674"	"24.9"	"100.000"	"69.9091"	"23436"	"23436"	"23420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"35.7"	""	"32.6"	""	"39.6"	""	"48.5"	"43.6"	""	"825"	"58"	"36.000"	"29.000"	"6.86157718277694E-05"	"20"	"0"	"1.789E-06"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"556.98755"	"1668.94809"	"1668.94820"	"-0.06"	"-0.00004"	"9/138"	"9"	"138"	"960203.338684082"	"HCD"	"MS2"	"18.8536"	"12.2"	"100.000"	"79.8729"	"27470"	"27470"	"27445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"15.6"	""	"18.3"	""	"18.9"	""	"24.7"	"24.9"	""	"825"	"59"	"36.000"	"29.000"	"4.72524088346283E-05"	"18"	"0"	"2.233E-07"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"834.97772"	"1668.94817"	"1668.94820"	"-0.02"	"-0.00002"	"7/138"	"7"	"138"	"163125.568603516"	"HCD"	"MS2"	"13.45699"	"6.3"	"100.000"	"79.7604"	"27397"	"27397"	"27367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"9.8"	""	"9.3"	""	"7.5"	""	"13.1"	"8.6"	""	"825"	"36"	"36.000"	"29.000"	"0.0113611934012699"	"20"	"9.9E-05"	"0.0007125"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98761"	"1668.94828"	"1668.94820"	"0.05"	"0.00003"	"13/138"	"13"	"138"	"425973.999572754"	"HCD"	"MS2"	"12.19684"	"12.5"	"100.000"	"68.2444"	"22725"	"22725"	"22700"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"13.7"	""	"18.4"	""	"20.6"	""	"25.1"	"22.0"	""	"823"	"43"	"36.000"	"29.000"	"0.00187227586751745"	"15"	"0"	"9.831E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9865"	"0.0000"	"1"	"1"	"1"	"556.98761"	"1668.94828"	"1668.94820"	"0.05"	"0.00003"	"10/138"	"10"	"138"	"1258565.98260498"	"HCD"	"MS2"	"13.03067"	"12.9"	"100.000"	"79.1285"	"27140"	"27140"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"21.4"	""	"15.4"	""	"21.3"	""	"27.9"	"19.8"	""	"823"	"74"	"36.000"	"29.000"	"1.50442256748801E-06"	"18"	"0"	"1.647E-07"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9625"	"0.0000"	"1"	"1"	"1"	"556.98761"	"1668.94828"	"1668.94820"	"0.05"	"0.00003"	"10/138"	"10"	"138"	"10539428.315918"	"HCD"	"MS2"	"3.538801"	"30.4"	"80.088"	"78.0476"	"26727"	"26727"	"26713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.1"	""	"45.4"	""	"35.9"	""	"46.1"	""	"57.2"	"62.9"	""	"823"	"80"	"36.000"	"29.000"	"3.96615643221264E-07"	"21"	"0"	"5.024E-08"	"1.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"834.97778"	"1668.94829"	"1668.94820"	"0.05"	"0.00004"	"16/138"	"16"	"138"	"369886.579772949"	"HCD"	"MS2"	"5.682829"	"15.2"	"100.000"	"78.8220"	"27015"	"27015"	"26993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"16.9"	""	"18.2"	""	"24.8"	""	"31.5"	"30.0"	""	"823"	"46"	"36.000"	"29.000"	"0.000953607898462028"	"21"	"0"	"2.427E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"834.97778"	"1668.94829"	"1668.94820"	"0.05"	"0.00004"	"13/138"	"13"	"138"	"899488.23614502"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"78.2022"	"26762"	"26762"	"26742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"49.4"	""	"39.3"	""	"35.6"	"0.5"	"61.6"	"52.8"	""	"823"	"65"	"36.000"	"29.000"	"1.31634533763801E-05"	"23"	"0"	"5.914E-07"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9016"	"0.0000"	"1"	"1"	"1"	"834.97778"	"1668.94829"	"1668.94820"	"0.05"	"0.00004"	"12/138"	"12"	"138"	"3917694.53326416"	"HCD"	"MS2"	"0"	"108.5"	"100.000"	"77.9853"	"26701"	"26701"	"26685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.1"	""	"150.2"	""	"129.9"	""	"157.9"	"1.0"	"212.2"	"196.7"	""	"823"	"61"	"36.000"	"29.000"	"3.31413228553416E-05"	"22"	"0"	"2.016E-06"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97791"	"1668.94853"	"1668.94820"	"0.20"	"0.00017"	"6/138"	"6"	"138"	"141328.450134277"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"70.5152"	"23681"	"23681"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.8"	""	"12.1"	""	"8.9"	""	"7.5"	""	"18.7"	"16.0"	""	"824"	"12"	"36.000"	"29.000"	"2.8437879918218"	"13"	"0.003818"	"0.0412"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"834.97791"	"1668.94853"	"1668.94820"	"0.20"	"0.00017"	"5/138"	"5"	"138"	"181605.768798828"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"79.8337"	"27454"	"27454"	"27429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"12.7"	""	"11.0"	""	"11.3"	""	"19.0"	"13.6"	""	"824"	"24"	"36.000"	"29.000"	"0.174540902012411"	"17"	"0.001488"	"0.01204"	"0.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97791"	"1668.94853"	"1668.94820"	"0.20"	"0.00017"	"12/138"	"12"	"138"	"236531.303344727"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"79.2159"	"27202"	"27202"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"12.0"	""	"9.7"	""	"15.8"	""	"17.0"	"18.0"	""	"824"	"31"	"36.000"	"29.000"	"0.0297096281423355"	"14"	"0.0001686"	"0.001691"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"834.97791"	"1668.94853"	"1668.94820"	"0.20"	"0.00017"	"12/138"	"12"	"138"	"649873.938415527"	"HCD"	"MS2"	"11.75098"	"24.9"	"100.000"	"69.8198"	"23365"	"23365"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"40.1"	""	"32.2"	""	"34.1"	""	"47.0"	"43.3"	""	"824"	"52"	"36.000"	"29.000"	"0.000245978538072541"	"21"	"0"	"1.947E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"556.98773"	"1668.94864"	"1668.94820"	"0.26"	"0.00015"	"8/138"	"8"	"138"	"247363.479797363"	"HCD"	"MS2"	"24.44574"	"8.0"	"100.000"	"84.9155"	"29509"	"29509"	"29485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"9.8"	""	"11.0"	""	"13.7"	""	"13.9"	"15.9"	""	"823"	"7"	"36.000"	"29.000"	"8.40175164231511"	"13"	"0.002711"	"0.02887"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9870"	"0.0000"	"1"	"1"	"1"	"556.98773"	"1668.94864"	"1668.94820"	"0.26"	"0.00015"	"10/138"	"10"	"138"	"1985584.29943848"	"HCD"	"MS2"	"12.88884"	"18.7"	"100.000"	"76.4839"	"26070"	"26070"	"26047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"23.1"	""	"23.1"	""	"30.2"	""	"41.6"	"38.1"	""	"823"	"77"	"36.000"	"29.000"	"8.4017516423151E-07"	"18"	"0"	"4.362E-08"	"1.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97803"	"1668.94878"	"1668.94820"	"0.35"	"0.00029"	"6/138"	"6"	"138"	"189267.299682617"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"80.7251"	"27816"	"27816"	"27795"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"11.7"	""	"8.7"	""	"16.0"	""	"34.1"	"18.6"	""	"823"	"29"	"36.000"	"29.000"	"0.0502770560157845"	"14"	"0.001316"	"0.01044"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9155"	"0.0000"	"1"	"1"	"1"	"834.97803"	"1668.94878"	"1668.94820"	"0.35"	"0.00029"	"10/138"	"10"	"138"	"3453204.10961914"	"HCD"	"MS2"	"0"	"97.5"	"100.000"	"77.9047"	"26641"	"26641"	"26627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.0"	""	"144.8"	""	"125.3"	""	"148.1"	"0.2"	"191.5"	"164.8"	""	"823"	"71"	"36.000"	"29.000"	"3.42270791808749E-06"	"23"	"0"	"5.163E-07"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9398"	"0.0000"	"1"	"1"	"1"	"556.98779"	"1668.94883"	"1668.94820"	"0.37"	"0.00021"	"10/138"	"10"	"138"	"417280696.708984"	"HCD"	"MS2"	"1.857597"	"26.3"	"2.312"	"77.2029"	"26390"	"26390"	"26380"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"32.3"	""	"36.2"	""	"38.1"	""	"51.7"	"44.7"	""	"823"	"83"	"36.000"	"29.000"	"2.1007280748988E-07"	"23"	"0"	"5.271E-07"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"834.97809"	"1668.94890"	"1668.94820"	"0.42"	"0.00035"	"13/138"	"13"	"138"	"198193.081787109"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"79.5178"	"27325"	"27325"	"27305"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"10.2"	""	"9.1"	""	"10.7"	""	"14.3"	"10.8"	""	"824"	"30"	"36.000"	"29.000"	"0.0417731490923512"	"15"	"0"	"0.0001229"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.97809"	"1668.94890"	"1668.94820"	"0.42"	"0.00035"	"9/138"	"9"	"138"	"250095.743103027"	"HCD"	"MS2"	"4.85142"	"9.7"	"100.000"	"79.1262"	"27139"	"27139"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"12.9"	""	"12.4"	""	"12.5"	""	"21.4"	"15.9"	""	"824"	"35"	"36.000"	"29.000"	"0.0123281303028257"	"15"	"9.9E-05"	"0.0005153"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"834.97809"	"1668.94890"	"1668.94820"	"0.42"	"0.00035"	"13/138"	"13"	"138"	"891407.974731445"	"HCD"	"MS2"	"0"	"31.5"	"100.000"	"78.2916"	"26825"	"26825"	"26807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.5"	""	"54.9"	""	"37.4"	""	"47.7"	""	"58.8"	"50.4"	""	"824"	"69"	"36.000"	"29.000"	"5.55772707627761E-06"	"23"	"0"	"1.619E-07"	"1.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"834.97815"	"1668.94902"	"1668.94820"	"0.49"	"0.00041"	"12/138"	"12"	"138"	"1649409.37792969"	"HCD"	"MS2"	"0"	"51.7"	"100.000"	"70.1035"	"23481"	"23481"	"23464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.8"	""	"78.2"	""	"60.8"	""	"72.6"	""	"110.4"	"94.3"	""	"824"	"62"	"36.000"	"29.000"	"2.69089787690759E-05"	"23"	"0"	"2.374E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"834.97821"	"1668.94914"	"1668.94820"	"0.57"	"0.00047"	"8/138"	"8"	"138"	"141397.388366699"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"80.1377"	"27578"	"27578"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.4"	""	"12.2"	""	"10.6"	""	"11.7"	""	"13.8"	"10.4"	""	"824"	"57"	"36.000"	"29.000"	"9.16003674948378E-05"	"22"	"0"	"0.0001621"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"834.97821"	"1668.94914"	"1668.94820"	"0.57"	"0.00047"	"12/138"	"12"	"138"	"67917781.8522949"	"HCD"	"MS2"	"0"	"289.6"	"16.015"	"76.9060"	"26273"	"26273"	"26263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"475.7"	""	"394.2"	""	"376.1"	""	"442.8"	"1.3"	"534.1"	"517.8"	""	"824"	"65"	"36.000"	"29.000"	"1.28794469925507E-05"	"22"	"0"	"4.916E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9221"	"0.0000"	"1"	"1"	"1"	"556.98792"	"1668.94919"	"1668.94820"	"0.59"	"0.00033"	"10/138"	"10"	"138"	"13217309.8361816"	"HCD"	"MS2"	"2.637532"	"36.6"	"78.330"	"77.9003"	"26640"	"26640"	"26627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.5"	""	"55.4"	""	"42.6"	""	"54.9"	""	"71.5"	"71.9"	""	"810"	"77"	"36.000"	"29.000"	"7.8968706290201E-07"	"23"	"0"	"5.539E-07"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9398"	"0.0000"	"1"	"1"	"1"	"556.98798"	"1668.94937"	"1668.94820"	"0.70"	"0.00039"	"10/138"	"10"	"138"	"253119119.944336"	"HCD"	"MS2"	"1.637138"	"37.8"	"5.306"	"76.8830"	"26264"	"26264"	"26250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.1"	""	"54.4"	""	"49.0"	""	"59.2"	""	"63.8"	"70.3"	""	"805"	"83"	"36.000"	"29.000"	"2.06426707056524E-07"	"23"	"0"	"4.463E-07"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"834.97839"	"1668.94951"	"1668.94820"	"0.78"	"0.00066"	"12/138"	"12"	"138"	"1699707.38409424"	"HCD"	"MS2"	"0"	"53.3"	"100.000"	"70.1903"	"23549"	"23549"	"23533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.9"	""	"71.6"	""	"70.9"	""	"77.2"	"1.7"	"106.7"	"97.4"	""	"805"	"65"	"36.000"	"29.000"	"1.3988330498089E-05"	"23"	"0"	"8.296E-07"	"1.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8906"	"0.0000"	"1"	"1"	"1"	"556.98822"	"1668.95011"	"1668.94820"	"1.14"	"0.00064"	"9/138"	"9"	"138"	"1257866.37359619"	"HCD"	"MS2"	"13.95112"	"17.5"	"100.000"	"79.5525"	"27339"	"27339"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"23.0"	""	"22.6"	""	"37.8"	"1.9"	"28.1"	"29.7"	""	"795"	"64"	"35.000"	"29.000"	"1.60449043704623E-05"	"24"	"0"	"1.382E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9250"	"0.0000"	"1"	"1"	"1"	"556.98822"	"1668.95011"	"1668.94820"	"1.14"	"0.00064"	"10/138"	"10"	"138"	"290622267.587891"	"HCD"	"MS2"	"1.861305"	"30.1"	"4.244"	"77.3285"	"26409"	"26409"	"26395"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"44.9"	""	"40.2"	""	"44.1"	""	"60.9"	"57.2"	""	"795"	"80"	"35.000"	"29.000"	"4.21053355757972E-07"	"24"	"0"	"1.824E-06"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"834.97882"	"1668.95036"	"1668.94820"	"1.30"	"0.00108"	"13/138"	"13"	"138"	"161261.283569336"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"70.4075"	"23604"	"23604"	"23582"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"10.3"	""	"8.6"	""	"9.0"	""	"15.9"	"13.3"	""	"797"	"27"	"36.000"	"29.000"	"0.0743752306797616"	"15"	"0"	"0.0003768"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9481"	"0.0000"	"1"	"1"	"1"	"556.98877"	"1668.95176"	"1668.94820"	"2.13"	"0.00118"	"10/138"	"10"	"138"	"163242616.900391"	"HCD"	"MS2"	"1.616889"	"43.3"	"10.063"	"76.7648"	"26185"	"26185"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.3"	""	"59.4"	""	"53.3"	""	"64.4"	"0.6"	"87.3"	"74.3"	""	"801"	"77"	"36.000"	"29.000"	"7.77324793975906E-07"	"21"	"0"	"4.434E-07"	"1.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9277"	"0.0000"	"1"	"1"	"1"	"556.98883"	"1668.95194"	"1668.94820"	"2.24"	"0.00125"	"10/138"	"10"	"138"	"451729872.009766"	"HCD"	"MS2"	"1.829538"	"33.0"	"2.530"	"77.0466"	"26297"	"26297"	"26287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.0"	""	"51.0"	""	"44.2"	""	"50.2"	""	"60.9"	"56.5"	""	"801"	"83"	"36.000"	"29.000"	"2.03987013858406E-07"	"24"	"0"	"1.985E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"556.98889"	"1668.95212"	"1668.94820"	"2.35"	"0.00131"	"10/138"	"10"	"138"	"88600890.6938477"	"HCD"	"MS2"	"1.856"	"28.5"	"10.900"	"77.6265"	"26529"	"26529"	"26516"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"31.2"	""	"44.2"	""	"43.7"	""	"60.9"	"50.3"	""	"801"	"75"	"36.000"	"29.000"	"1.3415365838271E-06"	"22"	"0"	"8.459E-07"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9518"	"0.0000"	"1"	"1"	"1"	"556.98901"	"1668.95249"	"1668.94820"	"2.57"	"0.00143"	"10/138"	"10"	"138"	"74236098.9208984"	"HCD"	"MS2"	"2.103821"	"30.6"	"13.420"	"77.7669"	"26613"	"26613"	"26596"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"40.7"	""	"43.4"	""	"42.9"	"2.1"	"61.6"	"52.9"	""	"799"	"83"	"36.000"	"29.000"	"1.89896422764151E-07"	"22"	"0"	"6.544E-07"	"1.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPQVSTPTLVEAAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9467"	"0.0000"	"1"	"1"	"1"	"556.98901"	"1668.95249"	"1668.94820"	"2.57"	"0.00143"	"10/138"	"10"	"138"	"246799863.561523"	"HCD"	"MS2"	"1.871184"	"30.2"	"4.473"	"77.4802"	"26498"	"26498"	"26489"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.1"	""	"40.7"	""	"38.6"	""	"46.1"	""	"58.6"	"58.1"	""	"799"	"75"	"36.000"	"29.000"	"1.3505690206429E-06"	"21"	"0"	"1.463E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFDSTPASSTDGR"	"[K].lSFDSTPASSTDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.41339"	"1669.81951"	"1669.82306"	"-2.13"	"-0.00178"	"7/124"	"7"	"124"	"155648.209350586"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"65.7662"	"21756"	"21756"	"21725"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.0"	""	"12.2"	""	"9.1"	""	"17.8"	""	"16.8"	"18.5"	""	"703"	"6"	"35.000"	"28.000"	"8.20210508891772"	"13"	"0.00329"	"0.03579"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFDSTPASSTDGR"	"[K].lSFDSTPASSTDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"835.41455"	"1669.82182"	"1669.82306"	"-0.74"	"-0.00062"	"8/124"	"8"	"124"	"107100.717651367"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"65.6866"	"21690"	"21690"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.0"	""	"8.0"	""	"7.2"	""	"12.6"	""	"15.2"	"13.9"	""	"727"	"19"	"35.000"	"28.000"	"0.48139814804326"	"14"	"0.006198"	"0.07544"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSFDSTPASSTDGR"	"[K].lSFDSTPASSTDGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"A1A5P0"	"Cdc42 effector protein 1 OS=Rattus norvegicus OX=10116 GN=Cdc42ep1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"835.41620"	"1669.82512"	"1669.82306"	"1.23"	"0.00103"	"7/124"	"7"	"124"	"122346.219421387"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"66.0322"	"21831"	"21831"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"8.4"	""	"14.1"	""	"15.0"	""	"17.7"	"19.4"	""	"745"	"13"	"35.000"	"28.000"	"1.9958425492372"	"13"	"0.003043"	"0.03273"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HYLGHNDDIK"	"[R].hYLGHNDDIk.[C]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"557.30743"	"1669.90775"	"1669.90623"	"0.91"	"0.00051"	"10/82"	"10"	"82"	"1345650.03546143"	"HCD"	"MS2"	"6.648602"	"62.1"	"100.000"	"33.1292"	"8478"	"8478"	"8450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.0"	""	"75.7"	""	"94.5"	""	"87.0"	"0.2"	"117.6"	"117.5"	""	"980"	"30"	"36.000"	"29.000"	"0.0482165441822956"	"22"	"0"	"0.0002508"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9125"	"0.0000"	"1"	"1"	"1"	"557.31482"	"1669.92990"	"1669.93222"	"-1.38"	"-0.00077"	"8/138"	"8"	"138"	"1466660.33355713"	"HCD"	"MS2"	"18.71723"	"13.6"	"100.000"	"81.2123"	"27986"	"27986"	"27966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"17.2"	""	"18.9"	""	"18.4"	""	"31.6"	"23.5"	""	"926"	"80"	"36.000"	"29.000"	"4.68361287322332E-07"	"25"	"0"	"1.399E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"557.31500"	"1669.93045"	"1669.93222"	"-1.06"	"-0.00059"	"9/138"	"9"	"138"	"1833603.14294434"	"HCD"	"MS2"	"20.88449"	"16.1"	"100.000"	"81.2467"	"28027"	"28027"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"20.5"	""	"24.3"	""	"22.6"	"3.0"	"29.9"	"27.0"	""	"937"	"62"	"36.000"	"29.000"	"2.94245341104039E-05"	"24"	"0"	"5.594E-07"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9423"	"0.0000"	"1"	"1"	"1"	"835.46973"	"1669.93218"	"1669.93222"	"-0.02"	"-0.00002"	"10/138"	"10"	"138"	"649017.060546875"	"HCD"	"MS2"	"0"	"29.7"	"100.000"	"80.9029"	"27861"	"27861"	"27843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.3"	""	"32.6"	""	"32.6"	""	"30.5"	""	"93.0"	"53.7"	""	"908"	"52"	"36.000"	"29.000"	"0.000297889950901519"	"19"	"0"	"8.896E-06"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6296"	"0.0000"	"1"	"1"	"1"	"835.47015"	"1669.93303"	"1669.93222"	"0.49"	"0.00041"	"17/138"	"17"	"138"	"810905.474243164"	"HCD"	"MS2"	"43.16584"	"42.1"	"100.000"	"81.2833"	"28042"	"28042"	"28023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.7"	""	"51.5"	""	"47.6"	""	"65.3"	""	"104.8"	"79.4"	""	"912"	"27"	"36.000"	"29.000"	"0.0895292286237236"	"24"	"0"	"0.0002236"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.6970"	"0.0000"	"1"	"1"	"1"	"835.47064"	"1669.93401"	"1669.93222"	"1.07"	"0.00090"	"10/138"	"10"	"138"	"857932.284057617"	"HCD"	"MS2"	"42.43459"	"42.2"	"100.000"	"81.2167"	"27988"	"27988"	"27966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.8"	""	"54.3"	""	"54.2"	""	"58.3"	""	"106.5"	"85.4"	""	"872"	"33"	"36.000"	"29.000"	"0.0219021369031761"	"24"	"9.9E-05"	"0.0004715"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APQVSTPTLVEAAR"	"[K].aPqVSTPTLVEAAR.[N]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"835.47107"	"1669.93486"	"1669.93222"	"1.58"	"0.00132"	"7/138"	"7"	"138"	"482096.057434082"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"80.9835"	"27921"	"27921"	"27900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"31.9"	""	"32.2"	""	"24.4"	""	"55.6"	"34.9"	""	"874"	"21"	"36.000"	"29.000"	"0.347121438574511"	"17"	"0"	"0.0001848"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPSLNPEQLK"	"[K].aDPSLNPEQLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"557.32172"	"1669.95060"	"1669.95251"	"-1.14"	"-0.00064"	"11/102"	"11"	"102"	"662327.476623535"	"HCD"	"MS2"	"22.99218"	"19.4"	"100.000"	"82.7578"	"28609"	"28609"	"28586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"22.7"	""	"22.3"	""	"39.8"	""	"42.8"	"36.8"	""	"834"	"39"	"36.000"	"29.000"	"0.00511842159393056"	"23"	"0"	"0.000238"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPSLNPEQLK"	"[K].aDPSLNPEQLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"557.32245"	"1669.95279"	"1669.95251"	"0.17"	"0.00010"	"10/102"	"10"	"102"	"744918.886657715"	"HCD"	"MS2"	"9.224008"	"22.4"	"100.000"	"82.3674"	"28455"	"28455"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"27.2"	""	"26.1"	""	"38.8"	""	"46.0"	"44.1"	""	"830"	"26"	"36.000"	"29.000"	"0.107906621871359"	"17"	"0.0001991"	"0.002768"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPSLNPEQLK"	"[K].aDPSLNPEQLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.6216"	"0.0000"	"1"	"1"	"1"	"835.48004"	"1669.95281"	"1669.95251"	"0.18"	"0.00015"	"7/102"	"7"	"102"	"260083.265808105"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"82.5670"	"28560"	"28560"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"27.7"	""	"20.4"	""	"28.8"	"1.7"	"44.3"	"38.0"	""	"830"	"37"	"36.000"	"29.000"	"0.00901670989228454"	"29"	"0.0009352"	"0.008077"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPSLNPEQLK"	"[K].aDPSLNPEQLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"557.32263"	"1669.95334"	"1669.95251"	"0.50"	"0.00028"	"9/102"	"9"	"102"	"1198640.64733887"	"HCD"	"MS2"	"34.19123"	"30.4"	"100.000"	"82.4043"	"28498"	"28498"	"28474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.7"	""	"30.0"	""	"36.7"	""	"58.0"	""	"62.6"	"62.1"	""	"825"	"30"	"36.000"	"29.000"	"0.0439970900007481"	"18"	"0.0001686"	"0.001864"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADPSLNPEQLK"	"[K].aDPSLNPEQLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"Q9QY17"	"Protein kinase C and casein kinase substrate in neurons 2 protein OS=Rattus norvegicus OX=10116 GN=Pacsin2 PE=1 SV=2"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"835.48065"	"1669.95403"	"1669.95251"	"0.91"	"0.00076"	"14/102"	"14"	"102"	"252285.360290527"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"82.4450"	"28482"	"28482"	"28463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"22.3"	""	"21.1"	""	"36.0"	""	"38.4"	"32.0"	""	"821"	"43"	"36.000"	"29.000"	"0.00186343033634908"	"23"	"0.0003938"	"0.006331"	"0.283"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTGSTWQEK"	"[K].eFTGSTWQEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"557.63123"	"1670.87912"	"1670.87901"	"0.07"	"0.00004"	"9/92"	"9"	"92"	"819435.434143066"	"HCD"	"MS2"	"20.71232"	"29.3"	"100.000"	"75.2866"	"25614"	"25614"	"25591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"26.7"	""	"37.4"	""	"45.2"	""	"70.2"	"72.6"	""	"978"	"28"	"36.000"	"29.000"	"0.0748701768762512"	"15"	"0.0005161"	"0.006571"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTGSTWQEK"	"[K].eFTGSTWQEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"835.94324"	"1670.87920"	"1670.87901"	"0.11"	"0.00010"	"9/92"	"9"	"92"	"308768.212768555"	"HCD"	"MS2"	"0"	"31.7"	"100.000"	"75.2497"	"25599"	"25599"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.8"	""	"25.4"	""	"21.7"	""	"55.8"	"1.8"	"82.9"	"90.0"	""	"976"	"52"	"36.000"	"29.000"	"0.000305084274074534"	"23"	"0"	"4.279E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTGSTWQEK"	"[K].eFTGSTWQEk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"835.94330"	"1670.87932"	"1670.87901"	"0.19"	"0.00016"	"8/92"	"8"	"92"	"304813.255981445"	"HCD"	"MS2"	"0"	"34.4"	"100.000"	"75.0804"	"25499"	"25499"	"25476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"35.4"	""	"23.3"	""	"63.6"	""	"84.1"	"99.0"	""	"973"	"47"	"36.000"	"29.000"	"0.00100019077494628"	"23"	"0"	"8.646E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"835.94727"	"1670.88725"	"1670.89108"	"-2.29"	"-0.00191"	"8/138"	"8"	"138"	"312609.264343262"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"69.6814"	"23309"	"23309"	"23283"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.0"	""	"12.0"	""	"14.4"	""	"22.2"	""	"27.7"	"27.5"	""	"1003"	"66"	"37.000"	"30.000"	"1.29798877694928E-05"	"25"	"0"	"3.487E-06"	"0.954"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"557.63470"	"1670.88956"	"1670.89108"	"-0.91"	"-0.00051"	"12/138"	"12"	"138"	"1871060.85723877"	"HCD"	"MS2"	"59.94808"	"44.1"	"100.000"	"69.9252"	"23442"	"23442"	"23420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.2"	""	"44.1"	""	"51.7"	""	"74.4"	"2.3"	"93.7"	"102.3"	""	"1021"	"17"	"37.000"	"30.000"	"0.963819583713659"	"19"	"0.0001686"	"0.001359"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDTATVNLSPGDPR"	"[R].vDTATVNLSPGDPR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"Q00910"	"Solute carrier organic anion transporter family member 2A1 OS=Rattus norvegicus OX=10116 GN=Slco2a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8193"	"0.0000"	"1"	"1"	"1"	"835.94897"	"1670.89067"	"1670.89108"	"-0.24"	"-0.00020"	"9/138"	"9"	"138"	"393580.595214844"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"69.8123"	"23396"	"23396"	"23372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"13.2"	""	"18.3"	""	"25.4"	""	"30.7"	"32.7"	""	"1013"	"83"	"37.000"	"30.000"	"2.68892971002996E-07"	""	"0"	"2.033E-06"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"557.97174"	"1671.90067"	"1671.90278"	"-1.26"	"-0.00070"	"8/96"	"8"	"96"	"515539.270629883"	"HCD"	"MS2"	"17.79765"	"18.1"	"100.000"	"84.7563"	"29446"	"29446"	"29429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"21.8"	""	"22.2"	""	"31.0"	""	"36.9"	"42.8"	""	"961"	"20"	"36.000"	"29.000"	"0.523230909846715"	"17"	"0.0001991"	"0.004414"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"836.45398"	"1671.90068"	"1671.90278"	"-1.25"	"-0.00105"	"11/96"	"11"	"96"	"139119.17590332"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"84.2277"	"29232"	"29232"	"29203"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"10.4"	""	"13.9"	""	"24.1"	""	"23.6"	"17.7"	""	"957"	"25"	"36.000"	"29.000"	"0.167834771686304"	"18"	"0.007259"	"0.09231"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"836.45483"	"1671.90239"	"1671.90278"	"-0.23"	"-0.00019"	"9/96"	"9"	"96"	"324849.275878906"	"HCD"	"MS2"	"11.22846"	"23.9"	"100.000"	"84.5414"	"29359"	"29359"	"29335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.3"	""	"20.0"	""	"23.2"	""	"60.3"	""	"46.5"	"48.7"	""	"948"	"49"	"36.000"	"29.000"	"0.000583147397365069"	"23"	"9.9E-05"	"0.000601"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"557.97241"	"1671.90268"	"1671.90278"	"-0.06"	"-0.00003"	"9/96"	"9"	"96"	"960640.436340332"	"HCD"	"MS2"	"20.73659"	"28.5"	"100.000"	"84.4497"	"29293"	"29293"	"29279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.6"	""	"31.8"	""	"28.6"	""	"57.3"	""	"56.3"	"57.5"	""	"947"	"37"	"36.000"	"29.000"	"0.010099967663749"	"23"	"9.9E-05"	"0.000886"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"557.97247"	"1671.90287"	"1671.90278"	"0.05"	"0.00003"	"7/96"	"7"	"96"	"995013.634460449"	"HCD"	"MS2"	"23.90808"	"27.7"	"100.000"	"84.4562"	"29324"	"29324"	"29308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"22.6"	""	"38.3"	""	"57.6"	"1.3"	"53.6"	"52.0"	""	"945"	"39"	"36.000"	"29.000"	"0.00546263034435767"	"25"	"0"	"0.0001678"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"836.45514"	"1671.90300"	"1671.90278"	"0.13"	"0.00011"	"7/96"	"7"	"96"	"320513.079833984"	"HCD"	"MS2"	"11.46476"	"23.9"	"100.000"	"84.5652"	"29340"	"29340"	"29318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"23.0"	""	"22.5"	""	"67.2"	""	"36.7"	"49.4"	""	"945"	"30"	"36.000"	"29.000"	"0.0428945200509192"	"15"	"0.0001991"	"0.002847"	"0.354"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLDNAYMEK"	"[K].iTLDNAYmEk.[C]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"P11980"	"Pyruvate kinase PKM OS=Rattus norvegicus OX=10116 GN=Pkm PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.45630"	"1671.90532"	"1671.90278"	"1.52"	"0.00127"	"7/96"	"7"	"96"	"173776.787536621"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"84.2698"	"29221"	"29221"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"10.6"	""	"14.2"	""	"37.1"	""	"21.8"	"23.0"	""	"977"	"25"	"36.000"	"29.000"	"0.138951925098831"	"14"	"0.0001991"	"0.005625"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQDHFLISPK"	"[K].eQDHFLISPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"557.98718"	"1671.94699"	"1671.94703"	"-0.02"	"-0.00001"	"7/102"	"7"	"102"	"1086968.4753418"	"HCD"	"MS2"	"34.76175"	"34.1"	"100.000"	"67.2562"	"22325"	"22325"	"22297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"56.7"	""	"45.7"	""	"51.8"	""	"49.0"	""	"59.9"	"62.3"	""	"957"	"13"	"36.000"	"29.000"	"2.30612021163624"	"18"	"9.9E-05"	"0.0005627"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQDHFLISPK"	"[K].eQDHFLISPk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"Q05764"	"Beta-adducin OS=Rattus norvegicus OX=10116 GN=Add2 PE=1 SV=4"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"557.98724"	"1671.94718"	"1671.94703"	"0.09"	"0.00005"	"12/102"	"12"	"102"	"1040196.36834717"	"HCD"	"MS2"	"39.64465"	"34.5"	"100.000"	"67.2734"	"22363"	"22363"	"22336"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"47.5"	""	"48.0"	""	"48.7"	""	"61.9"	"66.5"	""	"954"	"16"	"36.000"	"29.000"	"1.11562536284051"	"19"	"0"	"0.0003049"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RYTMGDAPDFDR"	"[K].rYTMGDAPDFDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"P08009"	"Glutathione S-transferase Yb-3 OS=Rattus norvegicus OX=10116 GN=Gstm3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.26923"	"1672.79312"	"1672.79507"	"-1.16"	"-0.00065"	"7/126"	"7"	"126"	"706410.816223145"	"HCD"	"MS2"	"68.38688"	"37.8"	"100.000"	"53.8929"	"16903"	"16903"	"16873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.5"	""	"44.3"	""	"45.3"	""	"67.7"	""	"67.4"	"84.2"	""	"492"	"13"	"33.000"	"26.000"	"1.333322190388"	"13"	"0.008792"	"0.1117"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAYLNDIGISSAR"	"[R].yAYLnDIGISSAR.[V]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.93964"	"1672.87200"	"1672.87437"	"-1.42"	"-0.00119"	"6/122"	"6"	"122"	"186436.331481934"	"HCD"	"MS2"	"13.81054"	"12.3"	"100.000"	"105.5870"	"37812"	"37812"	"37791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"15.2"	""	"14.0"	""	"20.2"	""	"25.4"	"29.6"	""	"910"	"14"	"36.000"	"29.000"	"1.65200514920396"	"13"	"0.00212"	"0.01935"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAYLNDIGISSAR"	"[R].yAYLnDIGISSAR.[V]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"558.29578"	"1672.87278"	"1672.87437"	"-0.95"	"-0.00053"	"16/122"	"16"	"122"	"413968.559326172"	"HCD"	"MS2"	"23.12882"	"10.0"	"100.000"	"105.6148"	"37823"	"37823"	"37807"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.5"	""	"16.0"	""	"13.4"	""	"19.6"	""	"16.5"	"24.0"	""	"899"	"54"	"36.000"	"29.000"	"0.000182276086684048"	"22"	"0"	"1.651E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAYLNDIGISSAR"	"[R].yAYLnDIGISSAR.[V]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"558.29602"	"1672.87351"	"1672.87437"	"-0.51"	"-0.00029"	"12/122"	"12"	"122"	"608680.307556152"	"HCD"	"MS2"	"26.70457"	"12.4"	"100.000"	"105.9136"	"37961"	"37961"	"37944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"19.3"	""	"13.2"	""	"17.4"	""	"20.3"	"29.4"	""	"936"	"51"	"36.000"	"29.000"	"0.000404804985987024"	"20"	"0"	"2.231E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAYLNDIGISSAR"	"[R].yAYLnDIGISSAR.[V]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"Q0H8B9"	"C-type lectin domain family 2 member D11 OS=Rattus norvegicus OX=10116 GN=Clec2d11 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"836.94104"	"1672.87480"	"1672.87437"	"0.26"	"0.00022"	"7/122"	"7"	"122"	"179046.641113281"	"HCD"	"MS2"	"100"	"12.3"	"100.000"	"105.8580"	"37939"	"37939"	"37915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"15.6"	""	"18.3"	""	"22.1"	""	"26.1"	"26.7"	""	"930"	"27"	"36.000"	"29.000"	"0.0840335968595081"	"17"	"0"	"0.0001512"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIHEAWTDGK"	"[K].aSIHEAWTDGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"558.30640"	"1672.90464"	"1672.90589"	"-0.75"	"-0.00042"	"12/94"	"12"	"94"	"2100868.5447998"	"HCD"	"MS2"	"24.36125"	"71.9"	"100.000"	"53.8494"	"16918"	"16918"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"103.9"	""	"89.9"	""	"78.1"	""	"115.7"	"1.9"	"145.9"	"147.2"	""	"1021"	"32"	"37.000"	"30.000"	"0.0291068860999322"	"20"	"0"	"0.0002821"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGAPENSGISTLER"	"[R].lGAPENSGISTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"836.95636"	"1672.90544"	"1672.90673"	"-0.77"	"-0.00064"	"4/136"	"4"	"136"	"149178.504211426"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"76.2626"	"25980"	"25980"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"8.6"	""	"8.5"	""	"10.5"	""	"23.7"	"15.4"	""	"1026"	"14"	"37.000"	"30.000"	"2.25484848719604"	"15"	"0.00455"	"0.0537"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASIHEAWTDGK"	"[K].aSIHEAWTDGk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"558.30707"	"1672.90665"	"1672.90589"	"0.45"	"0.00025"	"12/94"	"12"	"94"	"1331537.31243896"	"HCD"	"MS2"	"44.26451"	"50.6"	"100.000"	"54.1092"	"16991"	"16991"	"16961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.1"	""	"59.0"	""	"58.4"	""	"75.6"	""	"112.5"	"108.6"	""	"1015"	"32"	"37.000"	"30.000"	"0.032168887846289"	"19"	"0"	"0.0001344"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGAPENSGISTLER"	"[R].lGAPENSGISTLER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"F1LYQ8"	"FERM, ARHGEF and pleckstrin domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Farp1 PE=1 SV=2"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"836.95709"	"1672.90691"	"1672.90673"	"0.11"	"0.00009"	"6/136"	"6"	"136"	"154300.043762207"	"HCD"	"MS2"	"24.17462"	"10.6"	"100.000"	"76.4065"	"26070"	"26070"	"26042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"10.0"	""	"12.4"	""	"17.6"	""	"24.9"	"20.6"	""	"1015"	"19"	"37.000"	"30.000"	"0.614378552776869"	"28"	"0.0001991"	"0.003586"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDTFGELK"	"[R].iEYDTFGELk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.96356"	"1672.91985"	"1672.91981"	"0.02"	"0.00002"	"7/84"	"7"	"84"	"121674.215087891"	"HCD"	"MS2"	"8.88185"	"11.2"	"100.000"	"109.3816"	"39278"	"39278"	"39274"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.6"	""	"14.7"	""	"16.7"	""	"13.2"	""	"19.3"	"20.2"	""	"1008"	"9"	"37.000"	"30.000"	"6.56796056339959"	"13"	"0.007178"	"0.09193"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEYDTFGELK"	"[R].iEYDTFGELk.[V]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"558.31219"	"1672.92203"	"1672.91981"	"1.33"	"0.00074"	"7/84"	"7"	"84"	"237576.941894531"	"HCD"	"MS2"	"23.52827"	"8.7"	"100.000"	"109.1257"	"39171"	"39171"	"39161"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"10.8"	""	"13.3"	""	"12.6"	""	"16.7"	"19.1"	""	"1037"	"18"	"37.000"	"30.000"	"0.909387040204953"	"15"	"0.001348"	"0.01087"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLLGPDENSK"	"[K].nQLLGPDENSk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.3636"	"0.0000"	"1"	"1"	"1"	"836.96558"	"1672.92388"	"1672.92702"	"-1.88"	"-0.00157"	"8/106"	"8"	"106"	"279657.705322266"	"HCD"	"MS2"	"100"	"22.7"	"100.000"	"54.6427"	"17242"	"17242"	"17220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"28.3"	""	"29.8"	""	"36.8"	""	"43.9"	"37.0"	""	"1021"	"33"	"37.000"	"30.000"	"0.0247169993651683"	""	"9.9E-05"	"0.0004495"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLLGPDENSK"	"[K].nQLLGPDENSk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.1538"	"0.0000"	"1"	"1"	"1"	"836.96613"	"1672.92497"	"1672.92702"	"-1.22"	"-0.00102"	"5/106"	"5"	"106"	"250345.099853516"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"55.0083"	"17357"	"17357"	"17335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"26.4"	""	"27.5"	""	"32.6"	""	"30.0"	"40.5"	""	"1015"	"26"	"37.000"	"30.000"	"0.117878892415123"	""	"0.0001991"	"0.002566"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.99640"	"1672.98552"	"1672.98856"	"-1.82"	"-0.00152"	"5/108"	"5"	"108"	"76344.5587768555"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"88.4152"	"30922"	"30922"	"30902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.1"	""	"4.8"	""	"6.4"	""	"4.6"	""	"10.7"	"14.3"	""	"760"	"4"	"35.000"	"28.000"	"16.9739765017366"	"13"	"0.00981"	"0.1327"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"836.99738"	"1672.98747"	"1672.98856"	"-0.65"	"-0.00054"	"13/108"	"13"	"108"	"170211.734924316"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"88.1888"	"30791"	"30791"	"30772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.1"	""	"11.2"	""	"13.8"	""	"19.3"	"0.7"	"28.1"	"34.2"	""	"761"	"42"	"35.000"	"28.000"	"0.00262636245361212"	"26"	"0.0001991"	"0.00361"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"836.99792"	"1672.98857"	"1672.98856"	"0.01"	"0.00001"	"5/108"	"5"	"108"	"79586.1803588867"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"88.4857"	"30911"	"30911"	"30889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"6.3"	""	"4.6"	""	"7.8"	""	"13.5"	"14.1"	""	"705"	"6"	"35.000"	"28.000"	"8.24440126627422"	"17"	"0.004959"	"0.0627"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"836.99792"	"1672.98857"	"1672.98856"	"0.01"	"0.00001"	"4/108"	"4"	"108"	"151992.739318848"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"88.0929"	"30791"	"30791"	"30768"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"11.3"	""	"13.1"	""	"21.6"	""	"32.2"	"30.3"	""	"705"	"9"	"35.000"	"28.000"	"4.84349796191912"	"17"	"0.006267"	"0.0777"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"558.33447"	"1672.98886"	"1672.98856"	"0.18"	"0.00010"	"9/108"	"9"	"108"	"348777.304138184"	"HCD"	"MS2"	"0"	"14.1"	"100.000"	"88.2405"	"30851"	"30851"	"30831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"17.6"	""	"15.2"	""	"20.5"	""	"30.3"	"33.7"	""	"711"	"28"	"35.000"	"28.000"	"0.0524613672579581"	"15"	"0"	"0.0002674"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"558.33453"	"1672.98905"	"1672.98856"	"0.29"	"0.00016"	"12/108"	"12"	"108"	"491694.030761719"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"88.2693"	"30824"	"30824"	"30802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.2"	""	"18.3"	""	"16.6"	""	"30.4"	"0.9"	"33.9"	"41.7"	""	"711"	"40"	"35.000"	"28.000"	"0.0036044549762939"	"21"	"0"	"8.415E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEPQATISEIK"	"[K].vEPQATISEIk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"Q64232"	"Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus OX=10116 GN=Tecr PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"836.99847"	"1672.98967"	"1672.98856"	"0.67"	"0.00056"	"4/108"	"4"	"108"	"111658.320678711"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"87.8818"	"30669"	"30669"	"30647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.7"	""	"14.6"	""	"6.4"	""	"10.7"	""	"21.5"	"22.3"	""	"706"	"7"	"35.000"	"28.000"	"7.46061631062336"	"13"	"0.004314"	"0.05101"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSSSPGGAYVTR"	"[R].sLYSSSPGGAYVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.62708"	"1673.86667"	"1673.86962"	"-1.76"	"-0.00098"	"12/128"	"12"	"128"	"2402161.84667969"	"HCD"	"MS2"	"38.44361"	"68.2"	"100.000"	"60.3495"	"19557"	"19557"	"19537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.5"	""	"85.6"	""	"88.9"	""	"113.2"	""	"142.8"	"128.1"	""	"842"	"14"	"36.000"	"29.000"	"1.69934710439362"	"13"	"0"	"0.0002016"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSSSPGGAYVTR"	"[R].sLYSSSPGGAYVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.43781"	"1673.86833"	"1673.86962"	"-0.77"	"-0.00064"	"8/128"	"8"	"128"	"259259.273071289"	"HCD"	"MS2"	"18.60825"	"17.1"	"100.000"	"60.1377"	"19471"	"19471"	"19445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"17.6"	""	"16.5"	""	"33.8"	""	"46.5"	"37.6"	""	"855"	"41"	"36.000"	"29.000"	"0.00372336934706224"	"15"	"0"	"0.0001021"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSSSPGGAYVTR"	"[R].sLYSSSPGGAYVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.43787"	"1673.86846"	"1673.86962"	"-0.69"	"-0.00058"	"11/128"	"11"	"128"	"163935.602966309"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"60.1976"	"19462"	"19462"	"19435"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"12.8"	""	"12.4"	""	"23.4"	""	"26.2"	"26.3"	""	"859"	"50"	"36.000"	"29.000"	"0.0004295"	"16"	"0"	"2.879E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSSSPGGAYVTR"	"[R].sLYSSSPGGAYVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.43793"	"1673.86858"	"1673.86962"	"-0.62"	"-0.00052"	"9/128"	"9"	"128"	"562454.370178223"	"HCD"	"MS2"	"0"	"31.0"	"100.000"	"60.5154"	"19591"	"19591"	"19572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"33.4"	""	"25.3"	""	"61.2"	"0.5"	"81.1"	"73.5"	""	"892"	"64"	"36.000"	"29.000"	"1.80856806809979E-05"	"17"	"0"	"3.405E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSSSPGGAYVTR"	"[R].sLYSSSPGGAYVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"558.62775"	"1673.86869"	"1673.86962"	"-0.56"	"-0.00031"	"16/128"	"16"	"128"	"2056288.90777588"	"HCD"	"MS2"	"78.55371"	"62.6"	"100.000"	"60.4763"	"19575"	"19575"	"19556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.7"	""	"75.1"	""	"75.3"	""	"113.7"	""	"128.6"	"131.6"	""	"892"	"30"	"36.000"	"29.000"	"0.0415274112458652"	"15"	"0"	"9.406E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLYSSSPGGAYVTR"	"[R].sLYSSSPGGAYVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.43811"	"1673.86894"	"1673.86962"	"-0.40"	"-0.00034"	"9/128"	"9"	"128"	"556866.880554199"	"HCD"	"MS2"	"6.095987"	"28.4"	"100.000"	"60.4277"	"19588"	"19588"	"19574"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"34.4"	""	"24.5"	""	"51.4"	"0.1"	"68.3"	"69.1"	""	"887"	"64"	"36.000"	"29.000"	"1.86592259688501E-05"	"16"	"0"	"6.9E-06"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDPGSEETQTLVR"	"[K].lDPGSEETQTLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"Q68FR6"	"Elongation factor 1-gamma OS=Rattus norvegicus OX=10116 GN=Eef1g PE=2 SV=3"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"837.44720"	"1673.88713"	"1673.89075"	"-2.16"	"-0.00181"	"6/120"	"6"	"120"	"137487.059326172"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"71.9914"	"24280"	"24280"	"24250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"8.4"	""	"9.2"	""	"15.5"	""	"20.2"	"17.9"	""	"960"	"14"	"36.000"	"29.000"	"1.85883669562376"	"22"	"0.002559"	"0.02612"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFPDPTASSEK"	"[K].hFPDPTASSEk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"Q9ESN0"	"Protein Niban OS=Rattus norvegicus OX=10116 GN=Fam129a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"558.63464"	"1673.88938"	"1673.88991"	"-0.32"	"-0.00018"	"7/92"	"7"	"92"	"2098991.28692627"	"HCD"	"MS2"	"37.62543"	"85.4"	"100.000"	"46.4032"	"13863"	"13863"	"13852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.9"	""	"104.3"	""	"106.9"	""	"135.7"	""	"183.9"	"189.0"	""	"961"	"29"	"36.000"	"29.000"	"0.0661749149803541"	"14"	"9.9E-05"	"0.0004316"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"837.46649"	"1673.92571"	"1673.92713"	"-0.85"	"-0.00071"	"4/122"	"4"	"122"	"227279.767089844"	"HCD"	"MS2"	"39.05135"	"15.1"	"100.000"	"94.1331"	"33223"	"33223"	"33204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"22.5"	""	"15.7"	""	"28.5"	""	"25.6"	"31.7"	""	"1022"	"11"	"37.000"	"30.000"	"4.22105392233938"	"14"	"0.0009352"	"0.008327"	"0.258"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"558.64697"	"1673.92636"	"1673.92713"	"-0.46"	"-0.00026"	"18/122"	"18"	"122"	"940843.53137207"	"HCD"	"MS2"	"34.76228"	"17.6"	"100.000"	"93.9284"	"33104"	"33104"	"33083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.6"	""	"23.4"	""	"24.2"	""	"27.4"	"1.2"	"29.8"	"34.4"	""	"1026"	"90"	"37.000"	"30.000"	"4.84303229534679E-08"	"24"	"0"	"8.802E-09"	"1.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.46698"	"1673.92668"	"1673.92713"	"-0.27"	"-0.00022"	"11/122"	"11"	"122"	"401326.448852539"	"HCD"	"MS2"	"5.27774"	"18.0"	"100.000"	"93.8310"	"33100"	"33100"	"33078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"30.7"	""	"18.8"	""	"31.4"	""	"33.5"	"35.3"	""	"1019"	"75"	"37.000"	"30.000"	"1.71058314456786E-06"	"18"	"0"	"1.825E-08"	"1.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"558.64709"	"1673.92673"	"1673.92713"	"-0.24"	"-0.00013"	"17/122"	"17"	"122"	"833928.242431641"	"HCD"	"MS2"	"24.1819"	"16.5"	"100.000"	"93.8332"	"33101"	"33101"	"33078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"26.4"	""	"22.2"	""	"23.4"	""	"25.0"	"32.1"	""	"1017"	"100"	"37.000"	"30.000"	"4.83382537574219E-09"	"29"	"0"	"6.357E-09"	"1.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLIEDGSGEAVLSR"	"[R].vLIEDGSGEAVLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"837.46820"	"1673.92912"	"1673.92713"	"1.19"	"0.00100"	"17/122"	"17"	"122"	"390351.48236084"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"93.8983"	"33092"	"33092"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"28.9"	""	"20.9"	""	"42.5"	""	"36.9"	"34.5"	""	"983"	"38"	"36.000"	"29.000"	"0.00870008553013013"	"17"	"0"	"0.0002046"	"0.59"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVQAEGEAEAAK"	"[K].iVQAEGEAEAAk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"Q5XIH7"	"Prohibitin-2 OS=Rattus norvegicus OX=10116 GN=Phb2 PE=1 SV=1"	"0"	"2"	"2"	"0.1667"	"0.0000"	"1"	"1"	"1"	"837.47632"	"1673.94536"	"1673.94742"	"-1.23"	"-0.00103"	"4/114"	"4"	"114"	"120963.165161133"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"63.6707"	"20904"	"20904"	"20873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"15.4"	""	"12.9"	""	"20.0"	""	"22.5"	"22.7"	""	"986"	"6"	"36.000"	"29.000"	"12.2418462091072"	"18"	"0.007104"	"0.09103"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEPIAASTNR"	"[R].ekEPIAASTNR.[G]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"558.65729"	"1673.95731"	"1673.95865"	"-0.80"	"-0.00045"	"7/114"	"7"	"114"	"1924129.28521729"	"HCD"	"MS2"	"12.4939"	"92.3"	"100.000"	"30.0609"	"7247"	"7247"	"7227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.1"	""	"93.9"	""	"99.1"	""	"132.9"	"0.0"	"194.3"	"208.6"	""	"939"	"17"	"36.000"	"29.000"	"0.909150112072932"	"19"	"9.9E-05"	"0.0006428"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAGVEGSLIVEK"	"[K].nAGVEGSLIVEk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"837.49640"	"1673.98552"	"1673.98381"	"1.02"	"0.00086"	"9/122"	"9"	"122"	"93645.504699707"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"83.4982"	"28938"	"28938"	"28909"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"11.4"	""	"11.0"	""	"11.9"	""	"17.1"	"13.3"	""	"757"	"28"	"35.000"	"28.000"	"0.0550891262000274"	""	"0.0001686"	"0.001718"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGMESTQDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"558.96051"	"1674.86698"	"1674.86824"	"-0.75"	"-0.00042"	"11/116"	"11"	"116"	"1057975.55352783"	"HCD"	"MS2"	"29.69215"	"25.2"	"100.000"	"75.8060"	"25794"	"25794"	"25771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.1"	""	"30.8"	""	"37.6"	""	"37.6"	""	"52.2"	"51.0"	""	"875"	"26"	"36.000"	"29.000"	"0.115074224645423"	"16"	"0"	"0.0001348"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGMESTQDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"837.93713"	"1674.86699"	"1674.86824"	"-0.74"	"-0.00062"	"5/116"	"5"	"116"	"122414.071044922"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"75.7414"	"25768"	"25768"	"25743"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"8.8"	""	"12.6"	""	"11.1"	""	"14.3"	"18.6"	""	"874"	"15"	"36.000"	"29.000"	"1.28375289790719"	"14"	"0.0001991"	"0.002311"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGMESTQDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"837.93713"	"1674.86699"	"1674.86824"	"-0.74"	"-0.00062"	"11/116"	"11"	"116"	"148953.975769043"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"75.8255"	"25834"	"25834"	"25809"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"11.8"	""	"14.7"	""	"10.8"	""	"20.1"	"17.4"	""	"874"	"32"	"36.000"	"29.000"	"0.0271945224618923"	"16"	"0"	"0.0003308"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGMESTQDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"837.93756"	"1674.86785"	"1674.86824"	"-0.23"	"-0.00020"	"9/116"	"9"	"116"	"134662.12677002"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"76.0734"	"25903"	"25903"	"25877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.4"	""	"8.5"	""	"6.2"	""	"7.2"	""	"14.6"	"12.9"	""	"893"	"20"	"36.000"	"29.000"	"0.410980733787791"	"15"	"9.9E-05"	"0.0008056"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGMESTQDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"558.96082"	"1674.86789"	"1674.86824"	"-0.20"	"-0.00011"	"10/116"	"10"	"116"	"937474.621887207"	"HCD"	"MS2"	"37.60725"	"28.3"	"100.000"	"76.1458"	"25964"	"25964"	"25943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.8"	""	"29.5"	""	"42.0"	""	"45.5"	""	"57.2"	"61.9"	""	"893"	"30"	"36.000"	"29.000"	"0.0468620694393262"	"19"	"9.9E-05"	"0.0004378"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGMESTQDR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"837.93781"	"1674.86833"	"1674.86824"	"0.06"	"0.00005"	"8/116"	"8"	"116"	"144106.053039551"	"HCD"	"MS2"	"10.80629"	"6.8"	"100.000"	"76.1618"	"25971"	"25971"	"25943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"7.2"	""	"11.0"	""	"6.9"	""	"11.3"	"16.2"	""	"891"	"22"	"36.000"	"29.000"	"0.2678229000488"	"14"	"9.9E-05"	"0.0004521"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGEADDLEIK"	"[R].vQGEADDLEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"2"	"2"	"0.3793"	"0.0000"	"1"	"1"	"1"	"837.96814"	"1674.92900"	"1674.93144"	"-1.45"	"-0.00122"	"6/108"	"6"	"108"	"123493.197875977"	"HCD"	"MS2"	"28.04381"	"11.5"	"100.000"	"79.4513"	"27271"	"27271"	"27243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"6.7"	""	"7.6"	""	"33.4"	""	"28.2"	"19.1"	""	"1087"	"29"	"37.000"	"30.000"	"0.0656446819380536"	""	"0.002035"	"0.01808"	"0.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGEADDLEIK"	"[R].vQGEADDLEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"837.97052"	"1674.93376"	"1674.93144"	"1.39"	"0.00116"	"11/108"	"11"	"108"	"162479.604003906"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"79.7691"	"27428"	"27428"	"27398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"10.5"	""	"11.6"	""	"41.4"	""	"37.1"	"22.0"	""	"1052"	"44"	"37.000"	"30.000"	"0.00187925512867915"	"24"	"0.0001686"	"0.001618"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTSDPEINTK"	"[R].lVTSDPEINTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.8537"	"0.0000"	"1"	"1"	"1"	"837.98645"	"1674.96562"	"1674.96782"	"-1.31"	"-0.00110"	"11/98"	"11"	"98"	"150512.05255127"	"HCD"	"MS2"	"33.70778"	"12.5"	"100.000"	"74.7322"	"25358"	"25358"	"25336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.0"	""	"13.1"	""	"19.9"	""	"16.5"	""	"24.5"	"25.4"	""	"935"	"41"	"36.000"	"29.000"	"0.00352193726045513"	"21"	"0.0001686"	"0.001597"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEITDAEGLGLK"	"[R].aEITDAEGLGLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"558.99347"	"1674.96585"	"1674.96782"	"-1.17"	"-0.00066"	"9/98"	"9"	"98"	"631067.075134277"	"HCD"	"MS2"	"42.7633"	"22.8"	"100.000"	"98.7551"	"35060"	"35060"	"35037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"31.3"	""	"32.4"	""	"37.0"	""	"43.6"	"40.6"	""	"949"	"27"	"36.000"	"29.000"	"0.0929471797578593"	"21"	"0"	"0.0001404"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSQLAEVEEK"	"[R].aLSQLAEVEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8442"	"0.0000"	"1"	"1"	"1"	"837.98663"	"1674.96599"	"1674.96782"	"-1.09"	"-0.00092"	"10/108"	"10"	"108"	"264029.547363281"	"HCD"	"MS2"	"11.12142"	"20.6"	"100.000"	"97.7167"	"34640"	"34640"	"34615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"18.8"	""	"24.8"	""	"35.8"	""	"48.4"	"38.2"	""	"950"	"77"	"36.000"	"29.000"	"1.04398343957279E-06"	""	"0"	"3.006E-07"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSQLAEVEEK"	"[R].aLSQLAEVEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"558.99353"	"1674.96604"	"1674.96782"	"-1.07"	"-0.00059"	"13/108"	"13"	"108"	"804833.461425781"	"HCD"	"MS2"	"12.21977"	"26.8"	"100.000"	"97.7515"	"34685"	"34685"	"34663"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"33.0"	""	"29.7"	""	"49.5"	"0.7"	"50.4"	"51.3"	""	"950"	"48"	"36.000"	"29.000"	"0.000831177177096712"	"23"	"0"	"5.338E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEITDAEGLGLK"	"[R].aEITDAEGLGLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"558.99365"	"1674.96640"	"1674.96782"	"-0.85"	"-0.00047"	"12/98"	"12"	"98"	"607425.160522461"	"HCD"	"MS2"	"34.43084"	"23.8"	"100.000"	"98.7948"	"35106"	"35106"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"32.7"	""	"40.0"	""	"42.2"	""	"39.5"	"45.1"	""	"940"	"30"	"36.000"	"29.000"	"0.0477636885649227"	"22"	"0"	"0.0002139"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTSDPEINTK"	"[R].lVTSDPEINTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"837.98694"	"1674.96660"	"1674.96782"	"-0.73"	"-0.00061"	"8/98"	"8"	"98"	"319617.881347656"	"HCD"	"MS2"	"8.663572"	"25.0"	"100.000"	"75.0458"	"25485"	"25485"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.9"	""	"29.9"	""	"33.6"	""	"42.9"	""	"46.7"	"48.4"	""	"940"	"43"	"36.000"	"29.000"	"0.00212372293856213"	"18"	"0"	"0.0001526"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEITDAEGLGLK"	"[R].aEITDAEGLGLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9275"	"0.0000"	"1"	"1"	"1"	"837.98712"	"1674.96697"	"1674.96782"	"-0.51"	"-0.00043"	"10/98"	"10"	"98"	"341955.111816406"	"HCD"	"MS2"	"15.77801"	"28.2"	"100.000"	"98.7834"	"35101"	"35101"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"39.4"	""	"47.1"	""	"47.5"	"0.5"	"48.1"	"48.2"	""	"940"	"69"	"36.000"	"29.000"	"5.9442608331144E-06"	"22"	"0"	"3.88E-07"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTSDPEINTK"	"[R].lVTSDPEINTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"0.5676"	"0.0000"	"1"	"1"	"1"	"558.99390"	"1674.96714"	"1674.96782"	"-0.41"	"-0.00023"	"12/98"	"12"	"98"	"901402.233581543"	"HCD"	"MS2"	"2.31701"	"35.5"	"100.000"	"74.8660"	"25412"	"25412"	"25390"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.8"	""	"40.0"	""	"42.6"	""	"63.7"	""	"75.7"	"69.5"	""	"920"	"37"	"36.000"	"29.000"	"0.00969968948969313"	""	"0.0001991"	"0.002838"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTSDPEINTK"	"[R].lVTSDPEINTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"837.98737"	"1674.96745"	"1674.96782"	"-0.22"	"-0.00018"	"12/98"	"12"	"98"	"221621.880310059"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"74.9269"	"25468"	"25468"	"25443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"22.7"	""	"32.6"	""	"28.5"	""	"42.7"	"29.9"	""	"915"	"57"	"36.000"	"29.000"	"0.000101249082964458"	"22"	"0"	"0.000214"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSQLAEVEEK"	"[R].aLSQLAEVEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"558.99402"	"1674.96750"	"1674.96782"	"-0.19"	"-0.00011"	"14/108"	"14"	"108"	"723738.71081543"	"HCD"	"MS2"	"22.62314"	"24.9"	"100.000"	"97.6821"	"34626"	"34626"	"34599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.4"	""	"31.2"	""	"29.8"	""	"42.9"	""	"51.6"	"47.5"	""	"915"	"39"	"36.000"	"29.000"	"0.00546249557792406"	"21"	"0"	"2.298E-05"	"0.785"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSQLAEVEEK"	"[R].aLSQLAEVEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"558.99414"	"1674.96787"	"1674.96782"	"0.03"	"0.00002"	"11/108"	"11"	"108"	"882321.086486816"	"HCD"	"MS2"	"32.06393"	"31.0"	"100.000"	"98.0329"	"34768"	"34768"	"34750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.7"	""	"48.7"	""	"32.1"	""	"62.4"	"1.5"	"42.7"	"51.2"	""	"919"	"27"	"36.000"	"29.000"	"0.0883660649434218"	"19"	"9.9E-05"	"0.0004919"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTSDPEINTK"	"[R].lVTSDPEINTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"0.7451"	"0.0000"	"1"	"1"	"1"	"558.99414"	"1674.96787"	"1674.96782"	"0.03"	"0.00002"	"13/98"	"13"	"98"	"1178020.3682251"	"HCD"	"MS2"	"29.45617"	"41.3"	"100.000"	"74.9938"	"25495"	"25495"	"25472"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"43.7"	""	"53.3"	""	"67.2"	""	"74.3"	"89.9"	""	"919"	"51"	"36.000"	"29.000"	"0.00035750779520279"	"29"	"0"	"7.332E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEITDAEGLGLK"	"[R].aEITDAEGLGLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.9811"	"0.0000"	"1"	"1"	"1"	"837.98761"	"1674.96794"	"1674.96782"	"0.07"	"0.00006"	"15/98"	"15"	"98"	"257699.441772461"	"HCD"	"MS2"	"25.24861"	"20.1"	"100.000"	"98.7159"	"35044"	"35044"	"35026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"27.0"	""	"28.4"	""	"35.5"	""	"42.0"	"35.3"	""	"916"	"53"	"36.000"	"29.000"	"0.000206950022523714"	"17"	"0"	"9.793E-07"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSQLAEVEEK"	"[R].aLSQLAEVEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"558.99426"	"1674.96823"	"1674.96782"	"0.25"	"0.00014"	"12/108"	"12"	"108"	"960600.911804199"	"HCD"	"MS2"	"29.24331"	"36.2"	"100.000"	"98.0492"	"34806"	"34806"	"34787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.0"	""	"50.5"	""	"48.5"	""	"68.4"	""	"47.8"	"64.7"	""	"921"	"40"	"36.000"	"29.000"	"0.00507258852043822"	"22"	"0"	"5.069E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTSDPEINTK"	"[R].lVTSDPEINTk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"3"	"837.98785"	"1674.96843"	"1674.96782"	"0.36"	"0.00030"	"5/98"	"5"	"98"	"84502.2815551758"	"HCD"	"MS2"	"100"	"6.0"	"100.000"	"75.3995"	"25660"	"25660"	"25635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"5.2"	""	"10.0"	""	"13.4"	""	"10.9"	"10.6"	""	"915"	"7"	"36.000"	"29.000"	"9.06548614305832"	"15"	"0.007681"	"0.0977"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALSQLAEVEEK"	"[R].aLSQLAEVEEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"0"	"2"	"2"	"0.8261"	"0.0000"	"1"	"1"	"1"	"837.98792"	"1674.96855"	"1674.96782"	"0.44"	"0.00037"	"9/108"	"9"	"108"	"171966.593688965"	"HCD"	"MS2"	"25.75385"	"12.8"	"100.000"	"97.7306"	"34677"	"34677"	"34647"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"13.8"	""	"13.1"	""	"27.9"	""	"26.3"	"23.5"	""	"915"	"46"	"36.000"	"29.000"	"0.00104807195114126"	"24"	"0"	"1.137E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEITDAEGLGLK"	"[R].aEITDAEGLGLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"837.98877"	"1674.97026"	"1674.96782"	"1.46"	"0.00122"	"11/98"	"11"	"98"	"141748.065429688"	"HCD"	"MS2"	"11.69391"	"12.5"	"100.000"	"99.0141"	"35164"	"35164"	"35145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"12.3"	""	"15.4"	""	"20.8"	"1.2"	"26.8"	"24.8"	""	"910"	"38"	"36.000"	"29.000"	"0.00799855244351206"	"21"	"0.0001686"	"0.001325"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHFSFPLEDGNR"	"[K].qHFSFPLEDGNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"3"	"3"	"0.4615"	"0.0000"	"1"	"1"	"1"	"559.28339"	"1675.83561"	"1675.83898"	"-2.02"	"-0.00113"	"8/120"	"8"	"120"	"303103.831481934"	"HCD"	"MS2"	"55.98453"	"14.2"	"100.000"	"69.0714"	"23061"	"23061"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"21.6"	""	"19.1"	""	"26.3"	""	"22.2"	"25.6"	""	"747"	"13"	"35.000"	"28.000"	"1.88057477382283"	"21"	"0.0001991"	"0.004097"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHFSFPLEDGNR"	"[K].qHFSFPLEDGNR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"O35821"	"Myb-binding protein 1A OS=Rattus norvegicus OX=10116 GN=Mybbp1a PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"559.28442"	"1675.83872"	"1675.83898"	"-0.16"	"-0.00009"	"10/120"	"10"	"120"	"339721.416320801"	"HCD"	"MS2"	"45.06705"	"14.7"	"100.000"	"69.0612"	"23091"	"23091"	"23061"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"20.7"	""	"18.1"	""	"25.6"	""	"25.6"	"32.9"	""	"782"	"14"	"35.000"	"28.000"	"1.69893497651085"	"17"	"0.0001991"	"0.004325"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNKDQWEER"	"[K].lNkDQWEER.[I]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"559.31030"	"1675.91635"	"1675.91679"	"-0.26"	"-0.00014"	"11/86"	"11"	"86"	"1624899.39343262"	"HCD"	"MS2"	"23.09579"	"83.8"	"100.000"	"52.9010"	"16497"	"16497"	"16475"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"218.3"	""	"109.6"	""	"127.4"	""	"106.9"	"0.5"	"106.8"	"119.2"	""	"1110"	"4"	"37.000"	"30.000"	"24.004517622443"	"13"	"0.007443"	"0.09505"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLNHEIYEAK"	"[K].tLNHEIYEAk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"P19643"	"Amine oxidase [flavin-containing] B OS=Rattus norvegicus OX=10116 GN=Maob PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"559.31836"	"1675.94052"	"1675.94194"	"-0.85"	"-0.00047"	"10/100"	"10"	"100"	"2727651.61633301"	"HCD"	"MS2"	"6.354362"	"89.1"	"100.000"	"49.7329"	"15210"	"15210"	"15193"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.6"	""	"105.1"	""	"104.3"	""	"167.5"	"2.6"	"183.9"	"194.5"	""	"1050"	"27"	"37.000"	"30.000"	"0.113542722495669"	"17"	"0.0001686"	"0.001284"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEELISEGK"	"[R].iLSEELISEGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"838.49756"	"1675.98784"	"1675.98822"	"-0.23"	"-0.00019"	"10/92"	"10"	"92"	"118566.450073242"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"107.2767"	"38500"	"38500"	"38479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.1"	""	"12.2"	""	"12.1"	""	"15.6"	""	"16.6"	"11.6"	""	"706"	"29"	"35.000"	"28.000"	"0.0440326380527759"	"20"	"0.0009352"	"0.008"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEELISEGK"	"[R].iLSEELISEGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"838.49762"	"1675.98796"	"1675.98822"	"-0.16"	"-0.00013"	"6/92"	"6"	"92"	"125636.323120117"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"106.9956"	"38371"	"38371"	"38358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"11.6"	""	"11.9"	""	"15.4"	""	"16.2"	"13.9"	""	"706"	"24"	"35.000"	"28.000"	"0.125537855454852"	"22"	"0.0001991"	"0.004038"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEELISEGK"	"[R].iLSEELISEGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"3"	"3"	"0.5952"	"0.0000"	"1"	"1"	"1"	"559.33441"	"1675.98868"	"1675.98822"	"0.27"	"0.00015"	"10/92"	"10"	"92"	"371214.216918945"	"HCD"	"MS2"	"11.16288"	"13.5"	"100.000"	"106.9910"	"38369"	"38369"	"38358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"15.9"	""	"17.8"	""	"23.1"	""	"31.7"	"25.6"	""	"714"	"42"	"35.000"	"28.000"	"0.00230498559765372"	""	"0"	"0.000136"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEELISEGK"	"[R].iLSEELISEGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"3"	"3"	"0.6512"	"0.0000"	"1"	"1"	"1"	"559.33447"	"1675.98886"	"1675.98822"	"0.38"	"0.00021"	"10/92"	"10"	"92"	"326281.386291504"	"HCD"	"MS2"	"5.048641"	"12.0"	"100.000"	"107.2933"	"38506"	"38506"	"38490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"15.8"	""	"18.6"	""	"17.3"	""	"22.3"	"26.3"	""	"711"	"43"	"35.000"	"28.000"	"0.00198536154228943"	""	"0"	"0.000267"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILSEELISEGK"	"[R].iLSEELISEGk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"Q6AY63"	"ADP-sugar pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Nudt5 PE=2 SV=1"	"0"	"3"	"3"	"0.5200"	"0.0000"	"1"	"1"	"1"	"559.33478"	"1675.98978"	"1675.98822"	"0.93"	"0.00052"	"11/92"	"11"	"92"	"236800.38269043"	"HCD"	"MS2"	"27.7726"	"7.7"	"100.000"	"107.6179"	"38631"	"38631"	"38619"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"9.1"	""	"15.4"	""	"11.9"	""	"12.8"	"14.2"	""	"712"	"25"	"35.000"	"28.000"	"0.112836601684348"	"26"	"0.0001686"	"0.001155"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8980"	"0.0000"	"1"	"1"	"1"	"838.92535"	"1676.84343"	"1676.84413"	"-0.42"	"-0.00035"	"11/112"	"11"	"112"	"178738.534851074"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"84.5766"	"29345"	"29345"	"29318"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"16.5"	""	"22.6"	""	"23.5"	""	"27.0"	"16.6"	""	"820"	"49"	"36.000"	"29.000"	"0.000477291672058302"	"20"	"0"	"1.613E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.8939"	"0.0000"	"1"	"1"	"1"	"838.92554"	"1676.84380"	"1676.84413"	"-0.20"	"-0.00017"	"9/112"	"9"	"112"	"411311.572753906"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"84.8631"	"29458"	"29458"	"29447"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.5"	""	"34.3"	""	"30.9"	""	"43.3"	""	"41.2"	"38.6"	""	"820"	"66"	"36.000"	"29.000"	"1.07345503336979E-05"	"24"	"0"	"3.7E-07"	"1.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"838.92560"	"1676.84392"	"1676.84413"	"-0.12"	"-0.00010"	"6/112"	"6"	"112"	"240372.808532715"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"84.6315"	"29395"	"29395"	"29377"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"25.6"	""	"20.7"	""	"25.6"	""	"30.0"	"21.0"	""	"828"	"18"	"36.000"	"29.000"	"0.59566261139792"	"15"	"9.9E-05"	"0.000877"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"559.61951"	"1676.84397"	"1676.84413"	"-0.10"	"-0.00005"	"11/112"	"11"	"112"	"634145.700195313"	"HCD"	"MS2"	"31.96403"	"12.5"	"100.000"	"84.7861"	"29457"	"29457"	"29445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"13.9"	""	"16.9"	""	"21.6"	""	"19.4"	"28.8"	""	"834"	"51"	"36.000"	"29.000"	"0.000314873458936486"	"27"	"0"	"1.477E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"559.61957"	"1676.84415"	"1676.84413"	"0.01"	"0.00001"	"11/112"	"11"	"112"	"580042.167236328"	"HCD"	"MS2"	"32.64053"	"11.9"	"100.000"	"84.7384"	"29409"	"29409"	"29397"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"16.5"	""	"19.2"	""	"18.2"	""	"22.8"	"23.6"	""	"834"	"41"	"36.000"	"29.000"	"0.00367397380044342"	"24"	"0"	"0.0001975"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDENVSDNWR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"838.92621"	"1676.84514"	"1676.84413"	"0.60"	"0.00051"	"8/112"	"8"	"112"	"305725.188903809"	"HCD"	"MS2"	"0"	"19.5"	"100.000"	"84.9385"	"29518"	"29518"	"29499"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"26.3"	""	"33.9"	""	"28.9"	""	"32.5"	"38.2"	""	"838"	"65"	"36.000"	"29.000"	"1.37155751154233E-05"	""	"0"	"6.502E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"559.63342"	"1676.88572"	"1676.89175"	"-3.60"	"-0.00201"	"15/132"	"15"	"132"	"2017199.79858398"	"HCD"	"MS2"	"39.50755"	"53.7"	"100.000"	"52.9954"	"16536"	"16536"	"16506"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.5"	""	"73.4"	""	"90.4"	""	"67.8"	"0.8"	"87.9"	"91.7"	""	"1061"	"40"	"37.000"	"30.000"	"0.00579009098486066"	"20"	"0"	"1.206E-06"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"559.63397"	"1676.88736"	"1676.89175"	"-2.61"	"-0.00146"	"14/132"	"14"	"132"	"2412332.87054443"	"HCD"	"MS2"	"40.37702"	"56.8"	"100.000"	"52.6825"	"16442"	"16442"	"16420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.0"	""	"80.1"	""	"77.9"	""	"81.7"	""	"76.0"	"92.3"	""	"1058"	"54"	"37.000"	"30.000"	"0.000226180766774189"	"21"	"0"	"1.686E-07"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.94836"	"1676.88945"	"1676.89175"	"-1.37"	"-0.00115"	"8/132"	"8"	"132"	"163003.501647949"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"52.5420"	"16385"	"16385"	"16356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"14.7"	""	"15.4"	""	"17.2"	""	"14.0"	"16.4"	""	"1102"	"46"	"37.000"	"30.000"	"0.00153162201053537"	"15"	"0"	"0.0001008"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"3"	"3"	"0.7317"	"0.0000"	"1"	"1"	"1"	"559.63495"	"1676.89029"	"1676.89175"	"-0.87"	"-0.00049"	"12/132"	"12"	"132"	"1116414.68786621"	"HCD"	"MS2"	"25.41408"	"34.8"	"100.000"	"53.2900"	"16656"	"16656"	"16634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.0"	""	"46.3"	""	"50.1"	""	"57.4"	""	"61.2"	"68.6"	""	"1094"	"41"	"37.000"	"30.000"	"0.0039993307866543"	"26"	"0"	"1.198E-06"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9028"	"0.0000"	"1"	"1"	"1"	"838.94879"	"1676.89031"	"1676.89175"	"-0.86"	"-0.00072"	"10/132"	"10"	"132"	"418448.494018555"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"53.2047"	"16621"	"16621"	"16602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.2"	""	"42.7"	""	"43.6"	""	"35.5"	""	"28.2"	"36.9"	""	"1094"	"72"	"37.000"	"30.000"	"3.25827192510369E-06"	"24"	"0"	"9.504E-08"	"1.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"838.94897"	"1676.89067"	"1676.89175"	"-0.64"	"-0.00054"	"9/132"	"9"	"132"	"407351.85345459"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"52.8736"	"16520"	"16520"	"16498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.0"	""	"35.0"	""	"46.6"	""	"28.6"	""	"30.0"	"33.1"	""	"1092"	"60"	"37.000"	"30.000"	"5.00256387606611E-05"	"23"	"0"	"9.508E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STGSVVGQQPFGGAR"	"[K].sTGSVVGQQPFGGAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"P0C2X9"	"Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aldh4a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.94971"	"1676.89214"	"1676.89175"	"0.23"	"0.00019"	"7/132"	"7"	"132"	"176612.607788086"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"52.8825"	"16490"	"16490"	"16464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"18.0"	""	"16.4"	""	"13.3"	""	"12.7"	"14.8"	""	"1105"	"33"	"37.000"	"30.000"	"0.030997900675794"	"15"	"0"	"0.0003841"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"559.65759"	"1676.95823"	"1676.96234"	"-2.46"	"-0.00137"	"10/106"	"10"	"106"	"755524.708251953"	"HCD"	"MS2"	"65.63965"	"21.4"	"100.000"	"77.4016"	"26438"	"26438"	"26415"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.7"	""	"27.9"	""	"29.1"	""	"31.7"	""	"37.3"	"40.9"	""	"974"	"36"	"36.000"	"29.000"	"0.01107972448786"	"22"	"0"	"6.476E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8250"	"0.0000"	"1"	"1"	"1"	"559.65778"	"1676.95877"	"1676.96234"	"-2.13"	"-0.00119"	"11/106"	"11"	"106"	"935922.885375977"	"HCD"	"MS2"	"27.0428"	"25.1"	"100.000"	"77.6999"	"26558"	"26558"	"26540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.3"	""	"30.5"	""	"40.4"	""	"28.8"	""	"43.5"	"44.7"	""	"972"	"40"	"36.000"	"29.000"	"0.00440186044036525"	"22"	"0"	"1.659E-05"	"0.814"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"559.65784"	"1676.95896"	"1676.96234"	"-2.02"	"-0.00113"	"11/106"	"11"	"106"	"869604.172302246"	"HCD"	"MS2"	"0"	"25.1"	"100.000"	"77.8173"	"26633"	"26633"	"26612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.7"	""	"34.9"	""	"41.6"	""	"37.8"	""	"42.8"	"36.3"	""	"972"	"36"	"36.000"	"29.000"	"0.0116315145761302"	"19"	"0"	"1.204E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"838.98315"	"1676.95903"	"1676.96234"	"-1.97"	"-0.00166"	"8/106"	"8"	"106"	"192173.030639648"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"77.7047"	"26587"	"26587"	"26575"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"25.0"	""	"19.3"	""	"23.1"	""	"18.4"	"24.7"	""	"972"	"36"	"36.000"	"29.000"	"0.0120125793447784"	"23"	"0"	"0.0001153"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"838.98315"	"1676.95903"	"1676.96234"	"-1.97"	"-0.00166"	"11/106"	"11"	"106"	"220706.13684082"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"77.6976"	"26557"	"26557"	"26540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"20.9"	""	"24.1"	""	"27.5"	""	"35.0"	"27.9"	""	"972"	"31"	"36.000"	"29.000"	"0.0378997433714304"	"15"	"0.0009352"	"0.008199"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"559.65820"	"1676.96006"	"1676.96234"	"-1.36"	"-0.00076"	"10/106"	"10"	"106"	"744864.479003906"	"HCD"	"MS2"	"53.1113"	"21.4"	"100.000"	"77.4961"	"26504"	"26504"	"26489"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.5"	""	"22.5"	""	"26.2"	""	"34.7"	"0.8"	"33.7"	"38.1"	""	"961"	"34"	"36.000"	"29.000"	"0.0202159144938725"	"18"	"0"	"7.081E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAQGEYIAPEK"	"[K].lAQGEYIAPEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1;Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"O88813; P18163"	"Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus OX=10116 GN=Acsl5 PE=1 SV=1; Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus OX=10116 GN=Acsl1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"838.98474"	"1676.96221"	"1676.96234"	"-0.08"	"-0.00007"	"4/106"	"4"	"106"	"121051.590820313"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"77.9968"	"26706"	"26706"	"26685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"12.7"	""	"9.0"	""	"13.4"	""	"10.8"	"18.1"	""	"936"	"13"	"36.000"	"29.000"	"2.11956067394895"	"14"	"0.007443"	"0.09499"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVTDENVSDNWR"	"[K].lVTDEnVSDNWR.[I]"	"N-Term(TMT6plex); N6(Deamidated)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.4583"	"0.0000"	"1"	"1"	"1"	"559.95398"	"1677.84739"	"1677.82815"	"11.47"	"0.00641"	"9/112"	"9"	"112"	"390045.344421387"	"HCD"	"MS2"	"79.01501"	"14.1"	"100.000"	"85.0284"	"29555"	"29555"	"29531"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.0"	""	"17.8"	""	"20.2"	""	"22.4"	"1.6"	"28.2"	"21.1"	""	"851"	"24"	"36.000"	"29.000"	"0.17414041071512"	"16"	"0.0001991"	"0.002275"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAEAPDSFEK"	"[R].iLAEAPDSFEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08658"	"Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1"	"O08658"	"Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"559.98718"	"1677.94699"	"1677.94636"	"0.38"	"0.00021"	"9/92"	"9"	"92"	"237770.814880371"	"HCD"	"MS2"	"64.33704"	"12.3"	"100.000"	"102.4094"	"36541"	"36541"	"36517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.9"	""	"12.1"	""	"22.2"	""	"19.4"	""	"22.0"	"26.7"	""	"1030"	"32"	"37.000"	"30.000"	"0.0355473498977725"	"17"	"9.9E-05"	"0.0004516"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILAEAPDSFEK"	"[R].iLAEAPDSFEk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O08658"	"Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1"	"O08658"	"Nuclear pore complex protein Nup88 OS=Rattus norvegicus OX=10116 GN=Nup88 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"559.98718"	"1677.94699"	"1677.94636"	"0.38"	"0.00021"	"11/92"	"11"	"92"	"281612.694702148"	"HCD"	"MS2"	"30.86427"	"10.9"	"100.000"	"102.5459"	"36620"	"36620"	"36598"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"10.1"	""	"10.3"	""	"19.9"	""	"24.3"	"26.1"	""	"1030"	"38"	"37.000"	"30.000"	"0.0089703053979668"	"20"	"0.0001686"	"0.001067"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"559.99847"	"1677.98087"	"1677.98274"	"-1.12"	"-0.00063"	"10/94"	"10"	"94"	"434201.188354492"	"HCD"	"MS2"	"42.31376"	"13.9"	"100.000"	"106.6245"	"38241"	"38241"	"38217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"16.3"	""	"18.1"	""	"19.7"	""	"28.3"	"32.4"	""	"917"	"38"	"36.000"	"29.000"	"0.00748754318109553"	"18"	"0"	"0.0002097"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"559.99896"	"1677.98233"	"1677.98274"	"-0.24"	"-0.00014"	"8/94"	"8"	"94"	"300625.55279541"	"HCD"	"MS2"	"6.510637"	"11.0"	"100.000"	"106.9392"	"38365"	"38365"	"38356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"17.6"	""	"11.7"	""	"17.7"	""	"22.7"	"22.0"	""	"866"	"18"	"36.000"	"29.000"	"0.705485182133"	"20"	"0.001261"	"0.009615"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.49500"	"1677.98271"	"1677.98274"	"-0.02"	"-0.00002"	"8/94"	"8"	"94"	"148354.052124023"	"HCD"	"MS2"	"28.05036"	"10.2"	"100.000"	"106.6453"	"38249"	"38249"	"38227"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"14.9"	""	"10.2"	""	"18.0"	""	"18.4"	"19.1"	""	"873"	"22"	"36.000"	"29.000"	"0.264231291830083"	"14"	"0.001261"	"0.009979"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.49500"	"1677.98271"	"1677.98274"	"-0.02"	"-0.00002"	"10/94"	"10"	"94"	"160982.492919922"	"HCD"	"MS2"	"28.33124"	"10.3"	"100.000"	"106.3393"	"38109"	"38109"	"38094"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"11.1"	""	"15.0"	""	"19.2"	""	"20.0"	"21.7"	""	"873"	"24"	"36.000"	"29.000"	"0.177821491261495"	"14"	"0.0001686"	"0.001182"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.49512"	"1677.98296"	"1677.98274"	"0.13"	"0.00011"	"8/94"	"8"	"94"	"99767.8323974609"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"106.9254"	"38360"	"38360"	"38346"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"9.6"	""	"12.2"	""	"14.6"	""	"17.7"	"20.4"	""	"882"	"21"	"36.000"	"29.000"	"0.337628103647864"	"14"	"0.0001991"	"0.005811"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.49518"	"1677.98308"	"1677.98274"	"0.20"	"0.00017"	"10/94"	"10"	"94"	"140100.630126953"	"HCD"	"MS2"	"11.62277"	"11.3"	"100.000"	"106.6189"	"38220"	"38220"	"38206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.8"	""	"13.6"	""	"14.3"	""	"16.8"	""	"23.5"	"23.7"	""	"882"	"31"	"36.000"	"29.000"	"0.0388542552996534"	"14"	"0.0001991"	"0.002127"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"559.99933"	"1677.98343"	"1677.98274"	"0.41"	"0.00023"	"12/94"	"12"	"94"	"537634.162231445"	"HCD"	"MS2"	"21.18903"	"18.7"	"100.000"	"106.6166"	"38219"	"38219"	"38206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.9"	""	"19.3"	""	"27.1"	""	"30.4"	""	"38.4"	"35.8"	""	"872"	"51"	"36.000"	"29.000"	"0.000373668500520441"	"23"	"0"	"1.029E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSLEPVAAELK"	"[K].ySLEPVAAELk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"559.99963"	"1677.98435"	"1677.98274"	"0.96"	"0.00053"	"7/94"	"7"	"94"	"525542.918701172"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"106.3348"	"38107"	"38107"	"38094"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"18.7"	""	"24.4"	""	"25.3"	""	"27.2"	"34.0"	""	"878"	"31"	"36.000"	"29.000"	"0.0373649598770843"	"20"	"0"	"8.845E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEAPDYMYLR"	"[R].fEEAPDYmYLR.[Q]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.90259"	"1678.79790"	"1678.79843"	"-0.31"	"-0.00026"	"5/88"	"5"	"88"	"118782.489624023"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"96.0936"	"34016"	"34016"	"33990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"10.3"	""	"9.1"	""	"12.2"	""	"16.6"	"9.4"	""	"494"	"9"	"33.000"	"26.000"	"3.27866431059246"	"13"	"0.002755"	"0.02913"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEAPDYMYLR"	"[R].fEEAPDYmYLR.[Q]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"P97633"	"Casein kinase I isoform alpha OS=Rattus norvegicus OX=10116 GN=Csnk1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"839.90314"	"1678.79900"	"1678.79843"	"0.34"	"0.00029"	"5/88"	"5"	"88"	"128496.425170898"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"95.9946"	"33944"	"33944"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"8.6"	""	"11.1"	""	"11.1"	""	"12.5"	"12.9"	""	"505"	"2"	"34.000"	"27.000"	"15.9316729481249"	"14"	"0.004234"	"0.04833"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTmGYmAAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"839.91278"	"1678.81828"	"1678.81806"	"0.13"	"0.00011"	"12/104"	"12"	"104"	"159944.092712402"	"HCD"	"MS2"	"0"	"11.3"	"100.000"	"35.4817"	"9430"	"9430"	"9406"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"12.3"	""	"14.7"	""	"30.8"	""	"14.9"	"18.2"	""	"619"	"23"	"34.000"	"27.000"	"0.157637904592202"	"22"	"0.002189"	"0.02108"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMAAK"	"[R].dNSTmGYmAAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.91278"	"1678.81828"	"1678.81806"	"0.13"	"0.00011"	"12/104"	"12"	"104"	"174419.545654297"	"HCD"	"MS2"	"34.91899"	"11.3"	"100.000"	"35.3600"	"9418"	"9418"	"9399"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"11.8"	""	"17.9"	""	"26.9"	""	"15.8"	"17.5"	""	"619"	"16"	"34.000"	"27.000"	"0.799209529001407"	"13"	"0.004234"	"0.04794"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPLNFEGSEK"	"[K].aEPLNFEGSEk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"560.30560"	"1678.90226"	"1678.90522"	"-1.77"	"-0.00099"	"12/108"	"12"	"108"	"441630.322875977"	"HCD"	"MS2"	"54.16795"	"18.8"	"100.000"	"75.2002"	"25548"	"25548"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"24.4"	""	"23.1"	""	"36.0"	""	"31.2"	"33.9"	""	"1007"	"44"	"37.000"	"30.000"	"0.00220800206329705"	"22"	"0"	"2.845E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPLNFEGSEK"	"[K].aEPLNFEGSEk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"560.30597"	"1678.90335"	"1678.90522"	"-1.11"	"-0.00062"	"11/108"	"11"	"108"	"385159.051574707"	"HCD"	"MS2"	"46.22966"	"19.1"	"100.000"	"75.4479"	"25680"	"25680"	"25651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"27.8"	""	"26.7"	""	"34.8"	""	"33.9"	"31.0"	""	"1009"	"29"	"37.000"	"30.000"	"0.0577911278959272"	"18"	"0"	"0.0002232"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPLNFEGSEK"	"[K].aEPLNFEGSEk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.95593"	"1678.90459"	"1678.90522"	"-0.38"	"-0.00032"	"6/108"	"6"	"108"	"124080.210998535"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"75.3650"	"25646"	"25646"	"25623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"15.5"	""	"19.4"	""	"15.3"	""	"23.5"	"20.7"	""	"1018"	"22"	"37.000"	"30.000"	"0.302494708735326"	"14"	"0.001951"	"0.01699"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPLNFEGSEK"	"[K].aEPLNFEGSEk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"Q6AXR4"	"Beta-hexosaminidase subunit beta OS=Rattus norvegicus OX=10116 GN=Hexb PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"839.95667"	"1678.90605"	"1678.90522"	"0.50"	"0.00042"	"5/108"	"5"	"108"	"150907.9609375"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"75.1979"	"25547"	"25547"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"14.3"	""	"16.0"	""	"23.2"	""	"29.6"	"17.9"	""	"1017"	"13"	"37.000"	"30.000"	"2.61993765769823"	"13"	"0.005194"	"0.06601"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"839.97357"	"1678.93987"	"1678.94161"	"-1.04"	"-0.00087"	"7/98"	"7"	"98"	"103022.591369629"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"81.5371"	"28118"	"28118"	"28096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"11.1"	""	"16.3"	""	"18.5"	""	"18.0"	"13.8"	""	"986"	"8"	"36.000"	"29.000"	"7.44469516002926"	"14"	"0.00296"	"0.03194"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"560.31830"	"1678.94034"	"1678.94161"	"-0.75"	"-0.00042"	"8/98"	"8"	"98"	"1295750.71618652"	"HCD"	"MS2"	"8.875299"	"38.1"	"100.000"	"81.7975"	"28251"	"28251"	"28232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	""	"51.2"	""	"51.8"	""	"56.9"	"0.7"	"68.5"	"70.9"	""	"984"	"38"	"36.000"	"29.000"	"0.00781565000310106"	"18"	"0.0001991"	"0.003087"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"560.31842"	"1678.94071"	"1678.94161"	"-0.54"	"-0.00030"	"10/98"	"10"	"98"	"814891.581726074"	"HCD"	"MS2"	"5.089097"	"26.9"	"100.000"	"82.0633"	"28331"	"28331"	"28311"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.7"	""	"34.5"	""	"37.6"	""	"43.8"	""	"50.0"	"52.2"	""	"984"	"25"	"36.000"	"29.000"	"0.141242404635615"	"16"	"0.00511"	"0.06468"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"839.97400"	"1678.94072"	"1678.94161"	"-0.53"	"-0.00044"	"9/98"	"9"	"98"	"291549.26385498"	"HCD"	"MS2"	"23.1919"	"26.6"	"100.000"	"82.1300"	"28358"	"28358"	"28336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"40.6"	""	"31.1"	""	"33.5"	""	"51.9"	"56.2"	""	"984"	"17"	"36.000"	"29.000"	"1.07143320799775"	"14"	"0.00212"	"0.01963"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.8983"	"0.0000"	"1"	"1"	"1"	"839.97424"	"1678.94121"	"1678.94161"	"-0.24"	"-0.00020"	"17/98"	"17"	"98"	"628879.932006836"	"HCD"	"MS2"	"0"	"54.1"	"100.000"	"81.9705"	"28321"	"28321"	"28307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.2"	""	"69.6"	""	"74.0"	""	"76.2"	"0.0"	"103.4"	"90.6"	""	"969"	"59"	"36.000"	"29.000"	"6.35760851074803E-05"	"22"	"0"	"1.199E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.8140"	"0.0000"	"1"	"1"	"1"	"839.97449"	"1678.94170"	"1678.94161"	"0.05"	"0.00005"	"10/98"	"10"	"98"	"653481.081298828"	"HCD"	"MS2"	"0"	"53.5"	"100.000"	"81.8281"	"28235"	"28235"	"28215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"95.6"	""	"68.0"	""	"70.7"	""	"78.7"	""	"96.9"	"100.4"	""	"980"	"43"	"36.000"	"29.000"	"0.00247854084381526"	"23"	"0"	"0.0001217"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.31885"	"1678.94199"	"1678.94161"	"0.23"	"0.00013"	"12/98"	"12"	"98"	"1323923.56652832"	"HCD"	"MS2"	"8.347513"	"39.7"	"100.000"	"81.7540"	"28205"	"28205"	"28187"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.1"	""	"55.2"	""	"57.6"	""	"55.1"	""	"67.6"	"73.1"	""	"979"	"35"	"36.000"	"29.000"	"0.0145128496517216"	"15"	"0"	"0.0002886"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"560.31903"	"1678.94254"	"1678.94161"	"0.55"	"0.00031"	"11/98"	"11"	"98"	"1074798.23040771"	"HCD"	"MS2"	"10.87774"	"33.8"	"100.000"	"82.0859"	"28368"	"28368"	"28350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"49.1"	""	"44.6"	""	"59.5"	""	"57.5"	"59.7"	""	"967"	"34"	"36.000"	"29.000"	"0.017353875540086"	"17"	"9.9E-05"	"0.0008544"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IASPEGQDYLK"	"[R].iASPEGQDYLk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"839.97510"	"1678.94292"	"1678.94161"	"0.78"	"0.00066"	"7/98"	"7"	"98"	"159006.157958984"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"81.6613"	"28196"	"28196"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"22.6"	""	"20.7"	""	"21.7"	""	"24.8"	"22.4"	""	"975"	"5"	"36.000"	"29.000"	"14.4868719047229"	"16"	"0.004213"	"0.04581"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEQEYVQAVK"	"[K].qEQEYVQAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"840.47150"	"1679.93572"	"1679.93686"	"-0.68"	"-0.00057"	"8/94"	"8"	"94"	"255576.727539063"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"57.6194"	"18447"	"18447"	"18418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"21.6"	""	"21.9"	""	"44.7"	""	"56.7"	"52.3"	""	"996"	"51"	"36.000"	"29.000"	"0.000435741920063264"	"22"	"0"	"1.493E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEQEYVQAVK"	"[K].qEQEYVQAVk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"P07150"	"Annexin A1 OS=Rattus norvegicus OX=10116 GN=Anxa1 PE=1 SV=2"	"0"	"2"	"2"	"0.7903"	"0.0000"	"1"	"1"	"1"	"840.47241"	"1679.93755"	"1679.93686"	"0.41"	"0.00035"	"9/94"	"9"	"94"	"249554.780029297"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"57.9118"	"18531"	"18531"	"18502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"23.6"	""	"21.5"	""	"43.8"	""	"47.6"	"41.1"	""	"960"	"62"	"36.000"	"29.000"	"2.79409544530018E-05"	"29"	"0"	"1.387E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHLENNPALEK"	"[R].gHLENNPALEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.7297"	"0.0000"	"1"	"1"	"1"	"560.65405"	"1679.94760"	"1679.94809"	"-0.29"	"-0.00016"	"11/104"	"11"	"104"	"4796862.09020996"	"HCD"	"MS2"	"32.32568"	"147.4"	"100.000"	"41.7726"	"11977"	"11977"	"11954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"209.8"	""	"179.3"	""	"201.0"	""	"225.4"	""	"300.9"	"282.4"	""	"989"	"37"	"36.000"	"29.000"	"0.0107192967983334"	"25"	"0"	"7.421E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GHLENNPALEK"	"[R].gHLENNPALEk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"P19945"	"60S acidic ribosomal protein P0 OS=Rattus norvegicus OX=10116 GN=Rplp0 PE=1 SV=2"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"560.65424"	"1679.94815"	"1679.94809"	"0.04"	"0.00002"	"11/104"	"11"	"104"	"5577862.85229492"	"HCD"	"MS2"	"32.31367"	"159.5"	"100.000"	"41.6076"	"11944"	"11944"	"11925"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.7"	""	"183.4"	""	"220.2"	""	"252.4"	""	"326.1"	"313.6"	""	"987"	"31"	"36.000"	"29.000"	"0.0436804553451517"	"21"	"0"	"9.261E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6071"	"0.0000"	"1"	"1"	"1"	"840.91174"	"1680.81621"	"1680.81791"	"-1.01"	"-0.00085"	"7/126"	"7"	"126"	"196188.113891602"	"HCD"	"MS2"	"33.49994"	"12.1"	"100.000"	"96.9249"	"34320"	"34320"	"34297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"16.1"	""	"16.6"	""	"20.0"	""	"20.7"	"24.9"	""	"708"	"28"	"35.000"	"28.000"	"0.0550811833588197"	"26"	"9.9E-05"	"0.0009916"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"560.94373"	"1680.81662"	"1680.81791"	"-0.77"	"-0.00043"	"14/126"	"14"	"126"	"1000761.06231689"	"HCD"	"MS2"	"14.22375"	"15.6"	"100.000"	"96.9850"	"34344"	"34344"	"34322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"21.0"	""	"25.8"	""	"23.6"	""	"29.9"	"26.4"	""	"709"	"48"	"35.000"	"28.000"	"0.000529195618195754"	""	"0"	"0.0001108"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"560.94391"	"1680.81717"	"1680.81791"	"-0.44"	"-0.00025"	"15/126"	"15"	"126"	"1003610.27478027"	"HCD"	"MS2"	"13.12465"	"15.3"	"100.000"	"97.2896"	"34467"	"34467"	"34450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"18.1"	""	"27.7"	""	"20.8"	"1.3"	"25.7"	"26.4"	""	"697"	"52"	"35.000"	"28.000"	"0.000209992015746914"	""	"0"	"8.923E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"560.94397"	"1680.81736"	"1680.81791"	"-0.33"	"-0.00019"	"12/126"	"12"	"126"	"843322.853820801"	"HCD"	"MS2"	"10.18607"	"15.2"	"100.000"	"97.3729"	"34531"	"34531"	"34518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.3"	""	"23.0"	""	"19.4"	""	"24.0"	""	"24.3"	"30.7"	""	"697"	"42"	"35.000"	"28.000"	"0.00232382159070947"	""	"0"	"7.287E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.7344"	"0.0000"	"1"	"1"	"1"	"840.91248"	"1680.81767"	"1680.81791"	"-0.14"	"-0.00012"	"9/126"	"9"	"126"	"877285.932922363"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"97.2090"	"34435"	"34435"	"34420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.1"	""	"62.2"	""	"62.3"	""	"72.2"	""	"72.1"	"77.0"	""	"710"	"64"	"35.000"	"28.000"	"1.39710276786801E-05"	""	"0"	"2.244E-07"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"3"	"3"	"0.7021"	"0.0000"	"1"	"1"	"1"	"560.94409"	"1680.81772"	"1680.81791"	"-0.11"	"-0.00006"	"13/126"	"13"	"126"	"1349866.87786865"	"HCD"	"MS2"	"11.57178"	"19.8"	"100.000"	"97.0961"	"34419"	"34419"	"34404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.3"	""	"26.7"	""	"27.5"	""	"29.3"	""	"38.3"	"37.1"	""	"710"	"47"	"35.000"	"28.000"	"0.000748562993226318"	""	"0"	"1.269E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6935"	"0.0000"	"1"	"1"	"1"	"840.91254"	"1680.81780"	"1680.81791"	"-0.07"	"-0.00006"	"9/126"	"9"	"126"	"689610.538757324"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"97.3106"	"34506"	"34506"	"34490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.8"	""	"41.9"	""	"53.7"	""	"55.7"	""	"57.2"	"58.0"	""	"710"	"62"	"35.000"	"28.000"	"2.10004380132293E-05"	""	"0"	"3.914E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQFLDGDAWTNR"	"[K].eQFLDGDAWTNR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"P18418"	"Calreticulin OS=Rattus norvegicus OX=10116 GN=Calr PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"840.91302"	"1680.81877"	"1680.81791"	"0.51"	"0.00043"	"8/126"	"8"	"126"	"245400.733764648"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"97.0106"	"34385"	"34385"	"34362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"18.4"	""	"14.4"	""	"27.3"	""	"24.0"	"23.4"	""	"717"	"46"	"35.000"	"28.000"	"0.000978338535136683"	""	"0"	"7.177E-06"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHTMTDDVTFWK"	"[K].AHTMTDDVTFWk.[W]"	"K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.94647"	"1680.82486"	"1680.82531"	"-0.26"	"-0.00015"	"10/100"	"10"	"100"	"297159.643432617"	"HCD"	"MS2"	"26.76858"	"14.3"	"100.000"	"86.1259"	"29999"	"29999"	"29983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"16.5"	""	"22.2"	""	"15.9"	""	"25.3"	"40.6"	""	"755"	"17"	"35.000"	"28.000"	"0.680639197174487"	"14"	"0.001488"	"0.01258"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AHTMTDDVTFWK"	"[K].AHTMTDDVTFWk.[W]"	"K12(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"560.94666"	"1680.82541"	"1680.82531"	"0.06"	"0.00003"	"9/100"	"9"	"100"	"363361.577941895"	"HCD"	"MS2"	"16.55663"	"13.8"	"100.000"	"86.2324"	"30010"	"30010"	"29994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"14.5"	""	"20.4"	""	"18.2"	""	"21.1"	"39.8"	""	"758"	"21"	"35.000"	"28.000"	"0.28225341811037"	"16"	"0.002166"	"0.02001"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAADEGSGDMK"	"[K].lEAADEGSGDMk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"840.92957"	"1680.85185"	"1680.85147"	"0.23"	"0.00019"	"4/104"	"4"	"104"	"100976.98046875"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"56.8023"	"18079"	"18079"	"18053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"7.9"	""	"11.8"	""	"11.5"	""	"12.2"	"18.0"	""	"923"	"13"	"36.000"	"29.000"	"2.58923640938985"	"14"	"0.00511"	"0.06502"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTEAWEAAMK"	"[K].eGTEAWEAAMk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"840.93518"	"1680.86308"	"1680.86673"	"-2.17"	"-0.00182"	"8/92"	"8"	"92"	"110966.71887207"	"HCD"	"MS2"	"30.9067"	"10.8"	"100.000"	"89.9225"	"31528"	"31528"	"31509"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"13.9"	""	"13.6"	""	"12.7"	""	"23.4"	"24.3"	""	"958"	"13"	"36.000"	"29.000"	"2.59618426502378"	"16"	"0.007178"	"0.09188"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTEAWEAAMK"	"[K].eGTEAWEAAMk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"560.95966"	"1680.86441"	"1680.86673"	"-1.38"	"-0.00077"	"6/92"	"6"	"92"	"292249.398681641"	"HCD"	"MS2"	"21.54381"	"11.5"	"100.000"	"90.1425"	"31578"	"31578"	"31551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"16.3"	""	"16.1"	""	"16.4"	""	"26.2"	"22.5"	""	"968"	"19"	"36.000"	"29.000"	"0.669646127422342"	"22"	"0.003001"	"0.03211"	"0.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTEAWEAAMK"	"[K].eGTEAWEAAMk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"840.93634"	"1680.86540"	"1680.86673"	"-0.79"	"-0.00066"	"6/92"	"6"	"92"	"137792.345825195"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"90.0597"	"31544"	"31544"	"31523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"12.7"	""	"13.6"	""	"14.9"	""	"24.6"	"23.2"	""	"962"	"23"	"36.000"	"29.000"	"0.241626785560268"	"22"	"0.00329"	"0.03512"	"0.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGTEAWEAAMK"	"[K].eGTEAWEAAMk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"560.96124"	"1680.86917"	"1680.86673"	"1.46"	"0.00082"	"9/92"	"9"	"92"	"361840.059387207"	"HCD"	"MS2"	"28.30217"	"13.3"	"100.000"	"90.0054"	"31561"	"31561"	"31544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"16.4"	""	"14.9"	""	"21.0"	""	"28.8"	"25.1"	""	"1003"	"19"	"37.000"	"30.000"	"0.687497205731675"	"22"	"9.9E-05"	"0.0008137"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDTGENPIYK"	"[K].wDTGENPIYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"840.95294"	"1680.89861"	"1680.89974"	"-0.68"	"-0.00057"	"7/86"	"7"	"86"	"271930.400024414"	"HCD"	"MS2"	"21.68379"	"25.8"	"100.000"	"95.1892"	"33650"	"33650"	"33623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"31.4"	""	"25.3"	""	"42.9"	""	"57.5"	"59.1"	""	"1080"	"48"	"37.000"	"30.000"	"0.000846045577858401"	"20"	"0.0001991"	"0.005634"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDTGENPIYK"	"[K].wDTGENPIYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"840.95361"	"1680.89995"	"1680.89974"	"0.12"	"0.00010"	"4/86"	"4"	"86"	"134963.594360352"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"95.4985"	"33742"	"33742"	"33724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"11.1"	""	"15.5"	""	"26.1"	""	"29.0"	"37.1"	""	"1067"	"18"	"37.000"	"30.000"	"0.828198469812637"	"22"	"0.009411"	"0.1242"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WDTGENPIYK"	"[K].wDTGENPIYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"P49134"	"Integrin beta-1 OS=Rattus norvegicus OX=10116 GN=Itgb1 PE=2 SV=1"	"0"	"2"	"2"	"0.7105"	"0.0000"	"1"	"1"	"1"	"840.95398"	"1680.90068"	"1680.89974"	"0.56"	"0.00047"	"9/86"	"9"	"86"	"174454.635070801"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"95.4729"	"33764"	"33764"	"33751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"12.6"	""	"13.4"	""	"26.8"	""	"36.2"	"41.8"	""	"1076"	"38"	"37.000"	"30.000"	"0.00945762904309778"	"26"	"0.0003294"	"0.006206"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDPVVQSDMK"	"[K].fGDPVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"840.95428"	"1680.90129"	"1680.90311"	"-1.08"	"-0.00091"	"4/100"	"4"	"100"	"110723.335205078"	"HCD"	"MS2"	"20.33926"	"11.4"	"100.000"	"89.8002"	"31479"	"31479"	"31460"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"15.5"	""	"12.0"	""	"14.0"	"3.3"	"20.9"	"24.5"	""	"1062"	"18"	"37.000"	"30.000"	"0.883272117346561"	"21"	"0.005194"	"0.06604"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FGDPVVQSDMK"	"[K].fGDPVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P0DMW0"	"Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"840.95471"	"1680.90215"	"1680.90311"	"-0.57"	"-0.00048"	"5/100"	"5"	"100"	"113298.994628906"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"89.5000"	"31359"	"31359"	"31338"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"13.6"	""	"13.0"	""	"11.6"	""	"17.8"	"21.3"	""	"1081"	"19"	"37.000"	"30.000"	"0.657348533349362"	"14"	"0.00307"	"0.03407"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGMPADYVNK"	"[R].eVGMPADYVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"560.97284"	"1680.90396"	"1680.90311"	"0.51"	"0.00028"	"9/94"	"9"	"94"	"299688.10949707"	"HCD"	"MS2"	"29.80323"	"12.7"	"100.000"	"84.4768"	"29333"	"29333"	"29308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"13.9"	""	"17.2"	""	"23.7"	""	"22.8"	"24.1"	""	"1091"	"23"	"37.000"	"30.000"	"0.283657816109033"	"17"	"0.0001991"	"0.003773"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGMPADYVNK"	"[R].eVGMPADYVNk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"Q9JJ31"	"Cullin-5 OS=Rattus norvegicus OX=10116 GN=Cul5 PE=1 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"560.97296"	"1680.90433"	"1680.90311"	"0.72"	"0.00041"	"10/94"	"10"	"94"	"328733.258483887"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"84.4220"	"29282"	"29282"	"29263"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"16.4"	""	"16.5"	""	"21.8"	""	"30.9"	"24.8"	""	"1084"	"25"	"37.000"	"30.000"	"0.161064298920201"	"16"	"0.0005161"	"0.006508"	"0.28"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"560.97784"	"1680.91898"	"1680.92087"	"-1.13"	"-0.00063"	"14/110"	"14"	"110"	"23425025.7893066"	"HCD"	"MS2"	"5.732466"	"257.9"	"47.190"	"66.2585"	"21956"	"21956"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"356.8"	""	"323.3"	""	"348.7"	""	"420.3"	"1.6"	"476.1"	"518.4"	""	"1057"	"38"	"37.000"	"30.000"	"0.00889293241275742"	"23"	"0"	"4.246E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8529"	"0.0000"	"1"	"1"	"1"	"840.96320"	"1680.91911"	"1680.92087"	"-1.05"	"-0.00088"	"18/110"	"18"	"110"	"780030.161437988"	"HCD"	"MS2"	"0"	"64.9"	"100.000"	"65.9713"	"21839"	"21839"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.7"	""	"79.2"	""	"76.6"	""	"118.5"	"0.1"	"111.6"	"128.3"	""	"1057"	"68"	"37.000"	"30.000"	"8.33767556036107E-06"	"26"	"0"	"7.514E-06"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8548"	"0.0000"	"1"	"1"	"1"	"840.96320"	"1680.91911"	"1680.92087"	"-1.05"	"-0.00088"	"18/110"	"18"	"110"	"6370629.62261963"	"HCD"	"MS2"	"0"	"425.9"	"100.000"	"66.2610"	"21957"	"21957"	"21939"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"618.5"	""	"493.8"	""	"551.1"	""	"717.5"	""	"797.1"	"863.9"	""	"1057"	"62"	"37.000"	"30.000"	"3.24373219729594E-05"	"25"	"0"	"2.511E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"840.96338"	"1680.91948"	"1680.92087"	"-0.83"	"-0.00070"	"18/110"	"18"	"110"	"5081216.76141357"	"HCD"	"MS2"	"0"	"354.2"	"100.000"	"66.5426"	"22069"	"22069"	"22056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"496.6"	""	"373.7"	""	"468.4"	""	"597.7"	""	"652.9"	"776.6"	""	"1057"	"64"	"37.000"	"30.000"	"2.06084339958553E-05"	"26"	"0"	"1.754E-06"	"1.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"560.97809"	"1680.91971"	"1680.92087"	"-0.69"	"-0.00039"	"15/110"	"15"	"110"	"17504485.1358643"	"HCD"	"MS2"	"3.532297"	"158.6"	"41.066"	"66.5403"	"22068"	"22068"	"22056"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.4"	""	"195.4"	""	"187.7"	""	"258.4"	""	"311.7"	"344.0"	""	"1059"	"43"	"37.000"	"30.000"	"0.00274072817517826"	"25"	"0"	"1.217E-05"	"0.842"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"560.97809"	"1680.91971"	"1680.92087"	"-0.69"	"-0.00039"	"8/110"	"8"	"110"	"15038239.7115479"	"HCD"	"MS2"	"5.134951"	"170.3"	"51.428"	"66.5118"	"22024"	"22024"	"22017"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.0"	""	"203.3"	""	"219.5"	""	"271.8"	"2.2"	"319.3"	"372.5"	""	"1059"	"52"	"37.000"	"30.000"	"0.00032274978708867"	"29"	"0"	"1.08E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"840.96350"	"1680.91973"	"1680.92087"	"-0.68"	"-0.00057"	"18/110"	"18"	"110"	"7518747.6739502"	"HCD"	"MS2"	"0"	"519.4"	"100.000"	"66.2688"	"21927"	"21927"	"21909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"751.5"	""	"603.7"	""	"647.7"	""	"874.7"	"6.0"	"970.7"	"1071.3"	""	"1059"	"64"	"37.000"	"30.000"	"2.12258926983657E-05"	"26"	"0"	"6.669E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"560.97815"	"1680.91989"	"1680.92087"	"-0.58"	"-0.00033"	"14/110"	"14"	"110"	"25202298.1247559"	"HCD"	"MS2"	"43.96371"	"248.2"	"39.720"	"66.2321"	"21912"	"21912"	"21896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"334.1"	""	"296.3"	""	"324.2"	""	"418.1"	"3.6"	"459.2"	"517.9"	""	"1045"	"38"	"37.000"	"30.000"	"0.00895542693173153"	"22"	"0"	"8.419E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8594"	"0.0000"	"1"	"1"	"1"	"840.96399"	"1680.92070"	"1680.92087"	"-0.10"	"-0.00009"	"18/110"	"18"	"110"	"4099427.35858154"	"HCD"	"MS2"	"0"	"300.8"	"100.000"	"66.5370"	"22034"	"22034"	"22023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"418.9"	""	"324.3"	""	"394.4"	""	"483.1"	"4.3"	"579.5"	"649.9"	""	"1046"	"64"	"37.000"	"30.000"	"2.10621008952215E-05"	"26"	"0"	"1.354E-06"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPAQYDASELK"	"[K].tPAQYDASELk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8148"	"0.0000"	"1"	"1"	"1"	"840.96448"	"1680.92168"	"1680.92087"	"0.48"	"0.00040"	"16/110"	"16"	"110"	"1341272.56079102"	"HCD"	"MS2"	"0"	"110.2"	"100.000"	"65.9724"	"21806"	"21806"	"21785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.7"	""	"136.9"	""	"139.7"	""	"189.6"	""	"206.1"	"208.8"	""	"1032"	"54"	"37.000"	"30.000"	"0.000222663843643127"	"25"	"0"	"7.982E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAFQDTIRK"	"[K].eDAFQDTIRk.[F]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"P22355"	"Pulmonary surfactant-associated protein B OS=Rattus norvegicus OX=10116 GN=Sftpb PE=2 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"560.98260"	"1680.93326"	"1680.93211"	"0.69"	"0.00039"	"6/94"	"6"	"94"	"1174392.34136963"	"HCD"	"MS2"	"33.68163"	"55.5"	"100.000"	"60.5638"	"19611"	"19611"	"19588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.2"	""	"81.5"	""	"75.4"	""	"82.8"	""	"84.5"	"95.1"	""	"1020"	"4"	"37.000"	"30.000"	"19.7956686655231"	"13"	"0.009275"	"0.1201"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEmTk.[Y]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"840.97754"	"1680.94780"	"1680.94940"	"-0.95"	"-0.00080"	"9/84"	"9"	"84"	"324670.300048828"	"HCD"	"MS2"	"7.494035"	"21.3"	"100.000"	"94.8710"	"33521"	"33521"	"33507"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"18.9"	""	"17.2"	""	"60.6"	""	"40.9"	"41.9"	""	"974"	"59"	"36.000"	"29.000"	"6.52422546776432E-05"	"24"	"0"	"0.0003085"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEmTk.[Y]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"840.97797"	"1680.94866"	"1680.94940"	"-0.44"	"-0.00037"	"9/84"	"9"	"84"	"294539.149230957"	"HCD"	"MS2"	"11.23862"	"22.9"	"100.000"	"94.9153"	"33505"	"33505"	"33490"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.7"	""	"20.8"	""	"24.5"	""	"63.1"	"0.5"	"36.5"	"46.2"	""	"963"	"67"	"36.000"	"29.000"	"9.00733450586132E-06"	"24"	"0"	"0.0002688"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEmTk.[Y]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"840.97839"	"1680.94951"	"1680.94940"	"0.07"	"0.00006"	"11/84"	"11"	"84"	"160479.054016113"	"HCD"	"MS2"	"41.91518"	"11.0"	"100.000"	"94.6318"	"33391"	"33391"	"33367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"10.1"	""	"11.8"	""	"37.3"	""	"16.6"	"17.0"	""	"939"	"35"	"36.000"	"29.000"	"0.0156543700792339"	"15"	"0.001615"	"0.0138"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LITLEEEMTK"	"[R].lITLEEEmTk.[Y]"	"N-Term(TMT6plex); M8(Oxidation); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.4545"	"0.0000"	"1"	"1"	"1"	"840.97876"	"1680.95024"	"1680.94940"	"0.50"	"0.00042"	"9/84"	"9"	"84"	"125146.854980469"	"HCD"	"MS2"	"33.86184"	"8.0"	"100.000"	"94.5736"	"33402"	"33402"	"33381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"8.3"	""	"6.7"	""	"22.3"	""	"13.8"	"13.7"	""	"934"	"22"	"36.000"	"29.000"	"0.300827046995588"	"25"	"0.002588"	"0.02684"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHTELSTPELLR"	"[R].rHTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"560.99072"	"1680.95761"	"1680.95943"	"-1.08"	"-0.00061"	"10/122"	"10"	"122"	"2256107.56030273"	"HCD"	"MS2"	"14.17434"	"81.2"	"100.000"	"41.9680"	"12091"	"12091"	"12065"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.7"	""	"109.5"	""	"126.3"	""	"122.1"	""	"142.9"	"149.4"	""	"890"	"32"	"36.000"	"29.000"	"0.0280130251371453"	"16"	"0.0001686"	"0.001074"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHTELSTPELLR"	"[R].rHTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"560.99097"	"1680.95835"	"1680.95943"	"-0.65"	"-0.00036"	"7/122"	"7"	"122"	"2748039.62689209"	"HCD"	"MS2"	"22.27168"	"83.0"	"100.000"	"42.0695"	"12098"	"12098"	"12076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.2"	""	"114.0"	""	"119.5"	""	"125.8"	"1.6"	"148.0"	"139.9"	""	"870"	"55"	"36.000"	"29.000"	"0.000141738964935874"	"24"	"0"	"0.0001483"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHTELSTPELLR"	"[R].rHTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"4"	"4"	"0.7083"	"0.0000"	"1"	"1"	"1"	"420.99521"	"1680.95901"	"1680.95943"	"-0.26"	"-0.00011"	"6/122"	"6"	"122"	"2820134.28137207"	"HCD"	"MS2"	"17.89078"	"50.7"	"100.000"	"41.9612"	"12054"	"12054"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.9"	""	"74.7"	""	"67.7"	""	"71.6"	""	"89.2"	"88.9"	""	"874"	"24"	"36.000"	"29.000"	"0.168454042299942"	"21"	"0.0001991"	"0.002687"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RHTELSTPELLR"	"[R].rHTELSTPELLR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"P36953"	"Afamin OS=Rattus norvegicus OX=10116 GN=Afm PE=3 SV=1"	"1"	"4"	"4"	"0.6818"	"0.0000"	"1"	"1"	"1"	"420.99524"	"1680.95913"	"1680.95943"	"-0.18"	"-0.00008"	"6/122"	"6"	"122"	"3127930.26745605"	"HCD"	"MS2"	"11.58235"	"57.6"	"100.000"	"41.9333"	"12077"	"12077"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.8"	""	"91.9"	""	"83.2"	""	"86.0"	"0.5"	"93.5"	"95.9"	""	"873"	"22"	"36.000"	"29.000"	"0.277321951753286"	"21"	"0.0001991"	"0.004006"	"0.324"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EIVDAAEDYAK"	"[R].eIVDAAEDYAk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"P15178"	"Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"841.45660"	"1681.90593"	"1681.90489"	"0.62"	"0.00052"	"7/94"	"7"	"94"	"79909.6053466797"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"93.4846"	"32960"	"32960"	"32940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"10.8"	""	"12.5"	""	"7.9"	""	"14.6"	"12.9"	""	"1041"	"14"	"37.000"	"30.000"	"2.26683930253339"	"15"	"0.0042"	"0.04511"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLESDLVMNVYR"	"[K].vLESDLVmNVYR.[D]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"841.95215"	"1682.89702"	"1682.89847"	"-0.86"	"-0.00073"	"4/98"	"4"	"98"	"91501.1115112305"	"HCD"	"MS2"	"34.45372"	"4.9"	"100.000"	"105.5210"	"37803"	"37803"	"37777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.7"	""	"6.4"	""	"5.1"	""	"9.5"	""	"9.5"	"6.8"	""	"999"	"8"	"36.000"	"29.000"	"7.18679889838794"	"15"	"0.006997"	"0.08822"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYNNLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8511"	"0.0000"	"1"	"1"	"1"	"841.96210"	"1682.91692"	"1682.91876"	"-1.10"	"-0.00092"	"13/90"	"13"	"90"	"172576.258361816"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"93.6600"	"33031"	"33031"	"33011"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"29.9"	""	"26.4"	""	"15.8"	""	"25.2"	"25.5"	""	"962"	"47"	"36.000"	"29.000"	"0.00100726809126428"	"22"	"0"	"0.0001092"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYNNLEk.[A]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"841.96338"	"1682.91948"	"1682.91876"	"0.43"	"0.00036"	"4/90"	"4"	"90"	"150831.455200195"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"93.9051"	"33095"	"33095"	"33067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"19.7"	""	"24.8"	""	"11.8"	""	"23.9"	"24.6"	""	"942"	"18"	"36.000"	"29.000"	"0.772717783176983"	"20"	"0.008792"	"0.1118"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"561.64471"	"1682.91959"	"1682.92127"	"-1.00"	"-0.00056"	"12/108"	"12"	"108"	"15840985.2115479"	"HCD"	"MS2"	"15.63711"	"227.2"	"57.705"	"66.6973"	"22097"	"22097"	"22083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"465.9"	""	"410.4"	""	"282.1"	""	"339.0"	""	"344.0"	"305.3"	""	"942"	"57"	"36.000"	"29.000"	"9.86326966705771E-05"	"20"	"0"	"1.26E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9273"	"0.0000"	"1"	"1"	"1"	"561.64478"	"1682.91977"	"1682.92127"	"-0.89"	"-0.00050"	"12/108"	"12"	"108"	"10955662.8447266"	"HCD"	"MS2"	"5.960155"	"180.3"	"66.101"	"67.0100"	"22225"	"22225"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"360.4"	""	"321.5"	""	"210.4"	""	"267.4"	""	"274.1"	"269.7"	""	"930"	"55"	"36.000"	"29.000"	"0.000147384887031522"	"20"	"0"	"3.41E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"841.96356"	"1682.91985"	"1682.92127"	"-0.84"	"-0.00071"	"11/108"	"11"	"108"	"4943029.99328613"	"HCD"	"MS2"	"0"	"356.9"	"100.000"	"66.8408"	"22188"	"22188"	"22175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"767.1"	""	"640.8"	""	"408.4"	""	"540.3"	""	"541.6"	"470.2"	""	"932"	"90"	"36.000"	"29.000"	"4.47080694286424E-08"	"22"	"0"	"1.162E-08"	"1.463"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9153"	"0.0000"	"1"	"1"	"1"	"561.64484"	"1682.91996"	"1682.92127"	"-0.78"	"-0.00044"	"12/108"	"12"	"108"	"14378392.3093262"	"HCD"	"MS2"	"17.7756"	"226.4"	"65.196"	"66.7262"	"22142"	"22142"	"22131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"467.0"	""	"403.6"	""	"264.8"	""	"345.3"	""	"354.1"	"304.6"	""	"932"	"59"	"36.000"	"29.000"	"5.98943583533725E-05"	"21"	"0"	"4.238E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9556"	"0.0000"	"1"	"1"	"1"	"841.96393"	"1682.92058"	"1682.92127"	"-0.41"	"-0.00034"	"11/108"	"11"	"108"	"1331408.83856201"	"HCD"	"MS2"	"0"	"111.9"	"100.000"	"67.0926"	"22258"	"22258"	"22240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"232.6"	""	"201.0"	""	"128.5"	""	"163.1"	""	"175.5"	"155.9"	""	"953"	"90"	"36.000"	"29.000"	"4.54007372157271E-08"	"22"	"0"	"2.499E-09"	"1.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"841.96393"	"1682.92058"	"1682.92127"	"-0.41"	"-0.00034"	"11/108"	"11"	"108"	"4831772.62432861"	"HCD"	"MS2"	"0"	"374.9"	"100.000"	"66.7937"	"22136"	"22136"	"22123"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"784.9"	""	"671.9"	""	"443.2"	""	"595.2"	""	"551.5"	"491.8"	""	"953"	"88"	"36.000"	"29.000"	"7.90793161393998E-08"	"22"	"0"	"1.669E-07"	"1.225"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.8864"	"0.0000"	"1"	"1"	"1"	"841.96405"	"1682.92082"	"1682.92127"	"-0.26"	"-0.00022"	"12/108"	"12"	"108"	"176228.864624023"	"HCD"	"MS2"	"0"	"15.1"	"100.000"	"67.3900"	"22379"	"22379"	"22359"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"28.8"	""	"13.6"	""	"25.6"	""	"24.9"	"23.9"	""	"951"	"44"	"36.000"	"29.000"	"0.00185844845949287"	"20"	"0"	"0.000155"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9123"	"0.0000"	"1"	"1"	"1"	"561.64532"	"1682.92142"	"1682.92127"	"0.09"	"0.00005"	"12/108"	"12"	"108"	"13268789.9341431"	"HCD"	"MS2"	"4.993164"	"219.6"	"70.955"	"67.0155"	"22259"	"22259"	"22247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"459.0"	""	"387.9"	""	"253.1"	""	"326.0"	"1.3"	"341.8"	"304.2"	""	"944"	"57"	"36.000"	"29.000"	"9.41763812665311E-05"	"21"	"0"	"2.139E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSSSDLTTASK"	"[R].dLSSSDLTTASk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"841.96484"	"1682.92241"	"1682.92127"	"0.68"	"0.00057"	"19/108"	"19"	"108"	"1766498.31915283"	"HCD"	"MS2"	"0"	"141.7"	"100.000"	"67.1120"	"22297"	"22297"	"22284"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"288.4"	""	"253.5"	""	"163.9"	""	"221.1"	"0.6"	"211.2"	"198.5"	""	"953"	"78"	"36.000"	"29.000"	"8.24257495165995E-07"	"21"	"0"	"1.21E-08"	"1.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVEVTHDLQK"	"[K].gVVEVTHDLQk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"P29457"	"Serpin H1 OS=Rattus norvegicus OX=10116 GN=Serpinh1 PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"561.66589"	"1682.98313"	"1682.98414"	"-0.60"	"-0.00034"	"12/90"	"12"	"90"	"1307097.03979492"	"HCD"	"MS2"	"26.48813"	"46.8"	"100.000"	"63.2726"	"20741"	"20741"	"20718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"53.4"	""	"58.6"	""	"76.7"	""	"107.3"	"94.4"	""	"663"	"39"	"35.000"	"28.000"	"0.00433993807474304"	"21"	"0"	"3.418E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.93732"	"1683.79740"	"1683.79982"	"-1.44"	"-0.00081"	"9/102"	"9"	"102"	"3460344.73236084"	"HCD"	"MS2"	"24.62693"	"46.5"	"100.000"	"52.1733"	"16200"	"16200"	"16179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.5"	""	"50.3"	""	"46.9"	""	"98.2"	""	"107.4"	"84.7"	""	"470"	"53"	"33.000"	"26.000"	"0.000120522425237971"	"16"	"0"	"0.0001844"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.93811"	"1683.79978"	"1683.79982"	"-0.03"	"-0.00001"	"6/102"	"6"	"102"	"1363913.06890869"	"HCD"	"MS2"	"30.66259"	"37.8"	"100.000"	"52.1876"	"16240"	"16240"	"16219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"45.2"	""	"53.9"	""	"61.4"	""	"74.8"	"72.2"	""	"492"	"29"	"33.000"	"26.000"	"0.0300562716400559"	"14"	"9.9E-05"	"0.0007779"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.93829"	"1683.80033"	"1683.79982"	"0.30"	"0.00017"	"8/102"	"8"	"102"	"1612180.2689209"	"HCD"	"MS2"	"23.10907"	"41.0"	"100.000"	"52.4915"	"16330"	"16330"	"16307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"49.8"	""	"52.4"	""	"74.6"	""	"78.8"	"82.8"	""	"505"	"63"	"34.000"	"27.000"	"1.40042992521872E-05"	"16"	"0"	"4.596E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MHPELGSFYDSR"	"[R].mHPELGSFYDSR.[F]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"561.93829"	"1683.80033"	"1683.79982"	"0.30"	"0.00017"	"9/102"	"9"	"102"	"3559406.47155762"	"HCD"	"MS2"	"30.17018"	"55.6"	"100.000"	"51.8348"	"16096"	"16096"	"16075"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.3"	""	"58.2"	""	"66.5"	""	"110.1"	"1.0"	"126.7"	"94.3"	""	"505"	"59"	"34.000"	"27.000"	"3.05676028721497E-05"	"16"	"0"	"6.495E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETMNYADIER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"842.41388"	"1683.82048"	"1683.82095"	"-0.28"	"-0.00023"	"6/126"	"6"	"126"	"154316.198547363"	"HCD"	"MS2"	"31.22187"	"10.1"	"100.000"	"74.5177"	"25272"	"25272"	"25246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"9.0"	""	"12.9"	""	"12.5"	""	"19.8"	"25.8"	""	"639"	"22"	"35.000"	"28.000"	"0.196549010830803"	"17"	"0.001615"	"0.01333"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVETMNYADIER"	"[R].nVETMNYADIER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"Q01205"	"Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Rattus norvegicus OX=10116 GN=Dlst PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"842.41406"	"1683.82085"	"1683.82095"	"-0.06"	"-0.00005"	"5/126"	"5"	"126"	"190842.546142578"	"HCD"	"MS2"	"48.61113"	"11.6"	"100.000"	"74.5926"	"25333"	"25333"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.9"	""	"13.4"	""	"14.7"	""	"17.4"	""	"21.5"	"26.2"	""	"633"	"18"	"35.000"	"28.000"	"0.469216973948695"	"14"	"0.0009352"	"0.008166"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MNGQPQENYK"	"[K].mnGQPQENYk.[N]"	"N-Term(TMT6plex); M1(Oxidation); N2(Deamidated); K10(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"842.42401"	"1683.84075"	"1683.84124"	"-0.29"	"-0.00025"	"6/88"	"6"	"88"	"118220.627990723"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"36.6012"	"9919"	"9919"	"9899"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"10.7"	""	"11.4"	""	"15.5"	""	"11.4"	"12.2"	""	"761"	"34"	"35.000"	"28.000"	"0.0139750915339521"	"25"	"0.005507"	"0.07005"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYnNLEk.[A]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.3824"	"0.0000"	"1"	"1"	"1"	"842.45490"	"1683.90251"	"1683.90278"	"-0.16"	"-0.00013"	"11/90"	"11"	"90"	"147212.448669434"	"HCD"	"MS2"	"9.907601"	"13.7"	"100.000"	"97.5318"	"34565"	"34565"	"34537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.8"	""	"23.3"	""	"17.6"	""	"12.0"	""	"25.1"	"27.7"	""	"953"	"34"	"36.000"	"29.000"	"0.0189698066768741"	"17"	"0.001049"	"0.008717"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVMDYnNLEk.[A]"	"N-Term(TMT6plex); N6(Deamidated); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"842.45502"	"1683.90276"	"1683.90278"	"-0.01"	"-0.00001"	"12/90"	"12"	"90"	"180911.304016113"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"97.6061"	"34626"	"34626"	"34599"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"24.5"	""	"26.7"	""	"20.7"	""	"29.0"	"22.2"	""	"953"	"36"	"36.000"	"29.000"	"0.01202438588087"	"19"	"0.0001686"	"0.001279"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPESEHPSVTLFR"	"[K].gPESEHPSVTLFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"562.29956"	"1684.88413"	"1684.88560"	"-0.87"	"-0.00049"	"9/110"	"9"	"110"	"2466566.88146973"	"HCD"	"MS2"	"12.1318"	"56.3"	"100.000"	"58.9890"	"18970"	"18970"	"18949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.1"	""	"68.8"	""	"75.5"	""	"99.5"	""	"97.7"	"114.2"	""	"911"	"41"	"36.000"	"29.000"	"0.00364324503155702"	"20"	"0"	"2.614E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPESEHPSVTLFR"	"[K].gPESEHPSVTLFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"562.29962"	"1684.88431"	"1684.88560"	"-0.76"	"-0.00043"	"9/110"	"9"	"110"	"2147902.24291992"	"HCD"	"MS2"	"12.8813"	"49.1"	"100.000"	"58.7495"	"18908"	"18908"	"18887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.8"	""	"60.8"	""	"65.5"	""	"83.4"	""	"99.8"	"96.2"	""	"936"	"42"	"36.000"	"29.000"	"0.00314953075141061"	"17"	"0"	"1.721E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPESEHPSVTLFR"	"[K].gPESEHPSVTLFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"562.30005"	"1684.88559"	"1684.88560"	"0.00"	"0.00000"	"10/110"	"10"	"110"	"2151454.25115967"	"HCD"	"MS2"	"29.06612"	"57.5"	"100.000"	"58.4435"	"18783"	"18783"	"18763"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"77.6"	""	"72.6"	""	"98.0"	"2.5"	"107.3"	"105.8"	""	"927"	"38"	"36.000"	"29.000"	"0.00736291417975071"	"17"	"0"	"0.0001197"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPESEHPSVTLFR"	"[K].gPESEHPSVTLFR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"Q6AYS7"	"Aminoacylase-1A OS=Rattus norvegicus OX=10116 GN=Acy1a PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"562.30017"	"1684.88596"	"1684.88560"	"0.21"	"0.00012"	"9/110"	"9"	"110"	"1991694.50128174"	"HCD"	"MS2"	"29.13734"	"58.9"	"100.000"	"58.6874"	"18847"	"18847"	"18826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.9"	""	"62.9"	""	"84.2"	""	"104.0"	""	"113.5"	"113.5"	""	"924"	"28"	"36.000"	"29.000"	"0.0696052464578275"	"16"	"9.9E-05"	"0.0004835"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAGWYTVSAK"	"[K].eDAGWYTVSAk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"842.95129"	"1684.89531"	"1684.89466"	"0.39"	"0.00033"	"11/96"	"11"	"96"	"135709.083190918"	"HCD"	"MS2"	"19.7479"	"12.1"	"100.000"	"87.2314"	"30408"	"30408"	"30391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"15.5"	""	"17.3"	""	"17.7"	""	"23.8"	"23.6"	""	"962"	"34"	"36.000"	"29.000"	"0.0172244386246368"	"18"	"0"	"0.000171"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDAGWYTVSAK"	"[K].eDAGWYTVSAk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"P0C5E3"	"Palladin (Fragment) OS=Rattus norvegicus OX=10116 GN=Palld PE=1 SV=1"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"842.95215"	"1684.89702"	"1684.89466"	"1.40"	"0.00118"	"8/96"	"8"	"96"	"115048.823730469"	"HCD"	"MS2"	"27.62628"	"10.6"	"100.000"	"87.1269"	"30400"	"30400"	"30381"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"12.6"	""	"13.4"	""	"21.5"	""	"19.9"	"19.6"	""	"958"	"19"	"36.000"	"29.000"	"0.557616368087625"	"21"	"0.003357"	"0.03772"	"0.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFGGTDDPAKR"	"[K].yFGGTDDPAkR.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"1"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"562.30640"	"1684.90464"	"1684.90589"	"-0.74"	"-0.00042"	"6/86"	"6"	"86"	"2612324.98162842"	"HCD"	"MS2"	"0"	"134.1"	"100.000"	"46.9842"	"14092"	"14092"	"14074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.1"	""	"204.6"	""	"212.7"	""	"201.7"	"2.0"	"201.8"	"218.4"	""	"981"	"12"	"36.000"	"29.000"	"3.40909427777305"	"18"	"0.0001991"	"0.00253"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYPLEDATHIALR"	"[R].gYPLEDATHIALR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66H63"	"Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX=10116 GN=Gdap2 PE=2 SV=1"	"Q66H63"	"Ganglioside-induced differentiation-associated-protein 2 OS=Rattus norvegicus OX=10116 GN=Gdap2 PE=2 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"562.31171"	"1684.92057"	"1684.92199"	"-0.84"	"-0.00047"	"8/102"	"8"	"102"	"180020.571655273"	"HCD"	"MS2"	"28.62196"	"10.5"	"100.000"	"91.7691"	"32235"	"32235"	"32211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.1"	""	"12.6"	""	"11.3"	""	"18.1"	""	"20.2"	"22.4"	""	"961"	"23"	"36.000"	"29.000"	"0.265884727478161"	"16"	"0.0001991"	"0.004528"	"0.313"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALYGTTSETATWR"	"[K].aLYGTTSETATWR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"P07861"	"Neprilysin OS=Rattus norvegicus OX=10116 GN=Mme PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"843.43896"	"1685.87065"	"1685.86962"	"0.62"	"0.00052"	"4/108"	"4"	"108"	"190627.519836426"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"75.6277"	"25753"	"25753"	"25729"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"16.2"	""	"16.2"	""	"28.4"	""	"33.1"	"31.0"	""	"855"	"9"	"36.000"	"29.000"	"4.81876912515031"	"15"	"0.002166"	"0.01998"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"562.62927"	"1685.87326"	"1685.87867"	"-3.21"	"-0.00180"	"9/102"	"9"	"102"	"859699.900939941"	"HCD"	"MS2"	"38.9481"	"31.1"	"100.000"	"99.0831"	"35192"	"35192"	"35170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.2"	""	"43.5"	""	"41.3"	""	"62.6"	"0.4"	"50.7"	"56.4"	""	"881"	"30"	"36.000"	"29.000"	"0.0397142086115424"	"23"	"0.0001991"	"0.003181"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"562.63043"	"1685.87674"	"1685.87867"	"-1.14"	"-0.00064"	"10/102"	"10"	"102"	"459757.639404297"	"HCD"	"MS2"	"22.78971"	"16.2"	"100.000"	"99.5457"	"35408"	"35408"	"35385"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"21.9"	""	"18.6"	""	"25.3"	""	"29.7"	"34.6"	""	"888"	"42"	"36.000"	"29.000"	"0.00280145060949206"	"29"	"9.9E-05"	"0.0007739"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"562.63074"	"1685.87766"	"1685.87867"	"-0.60"	"-0.00034"	"10/102"	"10"	"102"	"1391593.68359375"	"HCD"	"MS2"	"7.924213"	"42.4"	"100.000"	"99.3738"	"35309"	"35309"	"35294"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.5"	""	"46.6"	""	"65.2"	""	"61.2"	""	"82.1"	"92.6"	""	"894"	"39"	"36.000"	"29.000"	"0.00508519396763074"	"27"	"9.9E-05"	"0.0004117"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"562.63074"	"1685.87766"	"1685.87867"	"-0.60"	"-0.00034"	"9/102"	"9"	"102"	"997772.45892334"	"HCD"	"MS2"	"14.06664"	"33.3"	"100.000"	"99.1510"	"35249"	"35249"	"35228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"48.3"	""	"43.9"	""	"59.6"	""	"65.2"	"58.4"	""	"894"	"29"	"36.000"	"29.000"	"0.0506182962366294"	"23"	"0.0001686"	"0.001783"	"0.396"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7167"	"0.0000"	"1"	"1"	"1"	"843.44275"	"1685.87822"	"1685.87867"	"-0.27"	"-0.00023"	"8/102"	"8"	"102"	"419651.174255371"	"HCD"	"MS2"	"0"	"41.0"	"100.000"	"99.3764"	"35310"	"35310"	"35294"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.9"	""	"55.2"	""	"55.8"	""	"61.4"	""	"82.1"	"88.6"	""	"906"	"60"	"36.000"	"29.000"	"4.94422472411288E-05"	""	"0"	"3.505E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"843.44287"	"1685.87847"	"1685.87867"	"-0.12"	"-0.00010"	"16/102"	"16"	"102"	"354769.226745605"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"99.4513"	"35370"	"35370"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.2"	""	"35.3"	""	"40.5"	""	"49.1"	""	"77.1"	"69.2"	""	"906"	"59"	"36.000"	"29.000"	"5.88976818849081E-05"	"29"	"0"	"1.836E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"843.44354"	"1685.87981"	"1685.87867"	"0.67"	"0.00057"	"13/102"	"13"	"102"	"220998.021728516"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"99.0808"	"35191"	"35191"	"35170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.9"	""	"27.5"	""	"33.8"	""	"42.1"	""	"40.4"	"41.8"	""	"904"	"32"	"36.000"	"29.000"	"0.0298633438499433"	"21"	"9.9E-05"	"0.0005162"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFEEVAFDEK"	"[K].nFEEVAFDEk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7872"	"0.0000"	"1"	"1"	"1"	"843.44366"	"1685.88005"	"1685.87867"	"0.82"	"0.00069"	"7/102"	"7"	"102"	"391206.877868652"	"HCD"	"MS2"	"0"	"36.4"	"100.000"	"99.1741"	"35258"	"35258"	"35244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.0"	""	"49.6"	""	"54.5"	""	"61.1"	""	"63.1"	"68.4"	""	"900"	"47"	"36.000"	"29.000"	"0.000802070445351639"	"26"	"0"	"2.148E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.47174"	"1685.93620"	"1685.93836"	"-1.28"	"-0.00108"	"8/142"	"8"	"142"	"559480.600341797"	"HCD"	"MS2"	"12.65131"	"37.1"	"100.000"	"62.9891"	"20626"	"20626"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"48.2"	""	"44.9"	""	"66.5"	""	"67.7"	"68.3"	""	"892"	"28"	"36.000"	"29.000"	"0.0637286705495952"	"14"	"0.0001991"	"0.004839"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.47229"	"1685.93730"	"1685.93836"	"-0.63"	"-0.00053"	"9/142"	"9"	"142"	"477782.446533203"	"HCD"	"MS2"	"19.51682"	"33.6"	"100.000"	"63.1126"	"20644"	"20644"	"20625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.4"	""	"39.9"	""	"42.0"	""	"60.1"	"0.6"	"58.9"	"66.6"	""	"886"	"35"	"36.000"	"29.000"	"0.0128944768330351"	"15"	"0.0001991"	"0.004251"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"562.65070"	"1685.93753"	"1685.93836"	"-0.49"	"-0.00028"	"12/142"	"12"	"142"	"2405375.08459473"	"HCD"	"MS2"	"38.35374"	"68.0"	"100.000"	"62.8894"	"20553"	"20553"	"20531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.2"	""	"73.3"	""	"82.0"	""	"113.9"	""	"139.2"	"142.9"	""	"887"	"44"	"36.000"	"29.000"	"0.00157722489785345"	"18"	"0"	"8.552E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSDRPVALVTGANK"	"[M].sSDRPVALVTGANk.[G]"	"N-Term(Prot)(Acetyl); K14(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"562.65082"	"1685.93790"	"1685.93836"	"-0.28"	"-0.00015"	"12/142"	"12"	"142"	"3137305.76507568"	"HCD"	"MS2"	"20.10614"	"84.4"	"100.000"	"62.9614"	"20615"	"20615"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.2"	""	"109.1"	""	"117.9"	""	"140.8"	""	"160.7"	"158.0"	""	"886"	"45"	"36.000"	"29.000"	"0.00145346214849112"	"18"	"0"	"5.61E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HRPELIDYGK"	"[R].hRPELIDYGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"422.24808"	"1685.97048"	"1685.97391"	"-2.04"	"-0.00086"	"8/94"	"8"	"94"	"3894155.84344482"	"HCD"	"MS2"	"12.63018"	"147.1"	"100.000"	"42.9295"	"12449"	"12449"	"12425"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"227.8"	""	"189.7"	""	"179.7"	""	"203.0"	""	"308.5"	"288.0"	""	"780"	"6"	"35.000"	"28.000"	"10.3053941535556"	"13"	"0.001488"	"0.01254"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HRPELIDYGK"	"[R].hRPELIDYGk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"4"	"4"	"0.7778"	"0.0000"	"1"	"1"	"1"	"422.24811"	"1685.97060"	"1685.97391"	"-1.96"	"-0.00083"	"10/94"	"10"	"94"	"3902526.16540527"	"HCD"	"MS2"	"34.12453"	"140.8"	"100.000"	"42.7500"	"12410"	"12410"	"12383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"220.3"	""	"182.6"	""	"161.6"	""	"211.3"	""	"278.2"	"285.4"	""	"780"	"9"	"35.000"	"28.000"	"5.34643888804292"	"15"	"0.0001991"	"0.003622"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLSEEPILK"	"[K].aEVLSEEPILk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"843.50726"	"1686.00725"	"1686.00896"	"-1.01"	"-0.00085"	"12/90"	"12"	"90"	"215075.148132324"	"HCD"	"MS2"	"19.33795"	"15.6"	"100.000"	"101.8786"	"36326"	"36326"	"36308"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"16.8"	""	"29.9"	""	"19.4"	""	"29.1"	"26.5"	""	"649"	"36"	"35.000"	"28.000"	"0.00728139684267507"	"24"	"0"	"9.323E-05"	"0.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLSEEPILK"	"[K].aEVLSEEPILk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"562.67401"	"1686.00748"	"1686.00896"	"-0.88"	"-0.00049"	"11/90"	"11"	"90"	"798923.455627441"	"HCD"	"MS2"	"7.603348"	"23.5"	"100.000"	"101.7679"	"36281"	"36281"	"36264"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.9"	""	"29.5"	""	"39.3"	""	"33.8"	"1.6"	"44.7"	"42.9"	""	"648"	"44"	"35.000"	"28.000"	"0.00142083946079095"	""	"0"	"4.169E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLSEEPILK"	"[K].aEVLSEEPILk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"843.50757"	"1686.00786"	"1686.00896"	"-0.65"	"-0.00055"	"11/90"	"11"	"90"	"190598.014892578"	"HCD"	"MS2"	"21.78126"	"13.7"	"100.000"	"102.0887"	"36436"	"36436"	"36414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"17.3"	""	"25.2"	""	"18.5"	""	"25.2"	"24.1"	""	"640"	"27"	"35.000"	"28.000"	"0.0690478210928853"	"15"	"9.9E-05"	"0.0004725"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEVLSEEPILK"	"[K].aEVLSEEPILk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"Q6P7P5"	"Basic leucine zipper and W2 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Bzw1 PE=1 SV=1"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"562.67426"	"1686.00821"	"1686.00896"	"-0.44"	"-0.00025"	"11/90"	"11"	"90"	"726408.114929199"	"HCD"	"MS2"	"30.97771"	"18.4"	"100.000"	"101.8997"	"36359"	"36359"	"36348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.6"	""	"24.1"	""	"26.9"	""	"27.1"	""	"30.6"	"38.0"	""	"642"	"18"	"35.000"	"28.000"	"0.557834066028549"	"27"	"9.9E-05"	"0.0009893"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTATDLTEFAAR"	"[K].dFTATDLTEFAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"562.95544"	"1686.85178"	"1686.85363"	"-1.10"	"-0.00062"	"11/112"	"11"	"112"	"321273.086914063"	"HCD"	"MS2"	"3.929296"	"10.9"	"100.000"	"110.8383"	"39861"	"39861"	"39836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"14.7"	""	"15.9"	""	"18.3"	""	"16.7"	"24.1"	""	"762"	"41"	"35.000"	"28.000"	"0.00272223100234771"	"20"	"0"	"7.173E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTATDLTEFAAR"	"[K].dFTATDLTEFAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"0.9762"	"0.0000"	"1"	"1"	"1"	"843.92963"	"1686.85198"	"1686.85363"	"-0.98"	"-0.00083"	"15/112"	"15"	"112"	"197867.34942627"	"HCD"	"MS2"	"0"	"13.7"	"100.000"	"110.8291"	"39857"	"39857"	"39836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"15.3"	""	"15.1"	""	"21.0"	""	"27.6"	"27.3"	""	"759"	"42"	"35.000"	"28.000"	"0.00235619798490309"	"16"	"0"	"0.0003497"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTATDLTEFAAR"	"[K].dFTATDLTEFAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"562.95575"	"1686.85270"	"1686.85363"	"-0.55"	"-0.00031"	"10/112"	"10"	"112"	"259058.980957031"	"HCD"	"MS2"	"11.72762"	"10.0"	"100.000"	"110.7526"	"39813"	"39813"	"39783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"8.0"	""	"12.9"	""	"19.7"	""	"21.3"	"18.0"	""	"763"	"16"	"35.000"	"28.000"	"1.04832161940856"	"15"	"9.9E-05"	"0.0009562"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFTATDLTEFAAR"	"[K].dFTATDLTEFAAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"P13437"	"3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acaa2 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.93005"	"1686.85283"	"1686.85363"	"-0.47"	"-0.00040"	"16/112"	"16"	"112"	"194480.172546387"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"110.7320"	"39804"	"39804"	"39783"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"14.8"	""	"17.0"	""	"23.1"	""	"22.9"	"19.0"	""	"763"	"46"	"35.000"	"28.000"	"0.000960493747940002"	"15"	"0"	"2.053E-06"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPENSDIGTGK"	"[K].nPPENSDIGTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"843.95447"	"1686.90166"	"1686.90628"	"-2.74"	"-0.00231"	"5/122"	"5"	"122"	"83815.6602783203"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"42.0072"	"12073"	"12073"	"12044"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"6.5"	""	"10.9"	""	"11.1"	""	"10.1"	"14.8"	""	"982"	"6"	"36.000"	"29.000"	"11.2481601750898"	"13"	"0.008718"	"0.1109"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPPENSDIGTGK"	"[K].nPPENSDIGTGk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"Q07205"	"Eukaryotic translation initiation factor 5 OS=Rattus norvegicus OX=10116 GN=Eif5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"843.95660"	"1686.90593"	"1686.90628"	"-0.21"	"-0.00018"	"8/122"	"8"	"122"	"119464.539367676"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"41.8526"	"12044"	"12044"	"12017"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.5"	""	"6.7"	""	"11.0"	""	"12.1"	""	"13.3"	"17.2"	""	"991"	"40"	"36.000"	"29.000"	"0.00544557393438813"	"15"	"0.0001686"	"0.00156"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AQQVSQGLDVLTAK"	"[K].AQQVSQGLDVLTAk.[V]"	"K14(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"5"	"562.99030"	"1686.95633"	"1686.95877"	"-1.44"	"-0.00081"	"4/142"	"4"	"142"	"278212.784240723"	"HCD"	"MS2"	"32.30931"	"13.4"	"100.000"	"84.7268"	"29405"	"29405"	"29389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"19.8"	""	"18.4"	""	"22.8"	"1.4"	"26.8"	"22.2"	""	"935"	"1"	"36.000"	"29.000"	"34.6562537808179"	"14"	"0.00455"	"0.05385"	"0.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKLDGNQDLIR"	"[R].gkLDGNQDLIR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"1"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"563.00098"	"1686.98838"	"1686.99029"	"-1.13"	"-0.00064"	"7/106"	"7"	"106"	"2748593.37445068"	"HCD"	"MS2"	"31.36701"	"118.5"	"100.000"	"51.8760"	"16079"	"16079"	"16059"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"251.6"	"2.9"	"163.2"	""	"198.1"	""	"157.2"	"1.2"	"167.0"	"176.0"	""	"813"	"16"	"36.000"	"29.000"	"1.10169289836363"	"16"	"9.9E-05"	"0.0008634"	"0.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GKLDGNQDLIR"	"[R].gkLDGNQDLIR.[F]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"P56574"	"Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus OX=10116 GN=Idh2 PE=1 SV=2"	"1"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"563.00177"	"1686.99076"	"1686.99029"	"0.28"	"0.00016"	"14/106"	"14"	"106"	"3268359.4475708"	"HCD"	"MS2"	"35.80786"	"135.5"	"100.000"	"51.5723"	"15990"	"15990"	"15967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"291.2"	""	"220.0"	""	"196.1"	""	"186.2"	""	"191.4"	"193.6"	""	"803"	"23"	"36.000"	"29.000"	"0.21962690910193"	"16"	"0.0001991"	"0.00248"	"0.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLFSHLDDNER"	"[K].nVLFSHLDDNER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456; P81377"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1b PE=2 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"563.29059"	"1687.85721"	"1687.86011"	"-1.72"	"-0.00097"	"13/122"	"13"	"122"	"1019404.68890381"	"HCD"	"MS2"	"11.1631"	"19.9"	"100.000"	"69.0429"	"23083"	"23083"	"23061"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"23.3"	""	"17.3"	""	"41.1"	""	"41.4"	"37.5"	""	"795"	"39"	"35.000"	"29.000"	"0.00483433935256931"	"21"	"0"	"8.817E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLFSHLDDNER"	"[K].nVLFSHLDDNER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456; P81377"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1b PE=2 SV=2"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"563.29108"	"1687.85868"	"1687.86011"	"-0.85"	"-0.00048"	"9/122"	"9"	"122"	"1262061.68939209"	"HCD"	"MS2"	"11.36848"	"23.0"	"100.000"	"69.0119"	"23036"	"23036"	"23016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"25.7"	""	"22.5"	""	"47.0"	""	"48.4"	"48.0"	""	"795"	"51"	"35.000"	"29.000"	"0.000342245016493379"	"23"	"0"	"4.067E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NVLFSHLDDNER"	"[K].nVLFSHLDDNER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P09456"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2"	"P09456; P81377"	"cAMP-dependent protein kinase type I-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1a PE=1 SV=2; cAMP-dependent protein kinase type I-beta regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar1b PE=2 SV=2"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"563.29156"	"1687.86014"	"1687.86011"	"0.02"	"0.00001"	"10/122"	"10"	"122"	"615987.454223633"	"HCD"	"MS2"	"11.44695"	"18.3"	"100.000"	"69.3400"	"23204"	"23204"	"23183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.7"	""	"22.9"	""	"26.8"	""	"27.8"	""	"34.7"	"36.1"	""	"798"	"50"	"36.000"	"29.000"	"0.000427536202789805"	"23"	"0"	"1.551E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.6333"	"0.0000"	"1"	"1"	"1"	"563.30756"	"1687.90812"	"1687.91042"	"-1.36"	"-0.00077"	"6/116"	"6"	"116"	"513696.90020752"	"HCD"	"MS2"	"18.62451"	"19.1"	"100.000"	"112.6686"	"40592"	"40592"	"40569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.6"	""	"22.1"	""	"30.2"	""	"28.0"	"0.7"	"38.3"	"38.0"	""	"965"	"30"	"36.000"	"29.000"	"0.0502918159682269"	"25"	"0.0001991"	"0.003062"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"844.45807"	"1687.90886"	"1687.91042"	"-0.92"	"-0.00078"	"8/116"	"8"	"116"	"574373.526062012"	"HCD"	"MS2"	"9.428843"	"20.5"	"100.000"	"112.6407"	"40581"	"40581"	"40553"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.8"	""	"20.5"	""	"26.6"	""	"35.4"	"1.7"	"36.2"	"40.8"	""	"959"	"44"	"36.000"	"29.000"	"0.00192658693802067"	"26"	"9.9E-05"	"0.000567"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEQPQVELFVK"	"[M].aEEQPQVELFVk.[A]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.7347"	"0.0000"	"1"	"1"	"1"	"844.45819"	"1687.90911"	"1687.91042"	"-0.78"	"-0.00066"	"7/116"	"7"	"116"	"405136.645996094"	"HCD"	"MS2"	"0"	"15.2"	"100.000"	"112.7172"	"40625"	"40625"	"40607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"19.7"	""	"22.2"	""	"23.8"	""	"23.4"	"28.4"	""	"999"	"49"	"36.000"	"29.000"	"0.000604693767708465"	"29"	"9.9E-05"	"0.0005323"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFVTPADVVSGNPK"	"[R].QFVTPADVVSGNPk.[L]"	"K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"844.46423"	"1687.92119"	"1687.92165"	"-0.27"	"-0.00023"	"10/142"	"10"	"142"	"947206.72479248"	"HCD"	"MS2"	"0"	"23.7"	"100.000"	"111.7863"	"40247"	"40247"	"40220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.0"	""	"35.7"	""	"42.8"	""	"32.2"	""	"35.5"	"43.6"	""	"1014"	"57"	"37.000"	"30.000"	"9.37579189821886E-05"	"19"	"0.0001991"	"0.002111"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QFVTPADVVSGNPK"	"[R].QFVTPADVVSGNPk.[L]"	"K14(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.9492"	"0.0000"	"1"	"1"	"1"	"844.46442"	"1687.92156"	"1687.92165"	"-0.06"	"-0.00005"	"10/142"	"10"	"142"	"1130637.79351807"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"111.6869"	"40193"	"40193"	"40167"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.3"	""	"43.6"	""	"42.6"	""	"36.6"	""	"42.2"	"54.2"	""	"1010"	"59"	"37.000"	"30.000"	"6.70334201153518E-05"	"20"	"0.0001686"	"0.001165"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AYGENIGYSEK"	"[K].aYGENIGYSEk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"P07340"	"Sodium/potassium-transporting ATPase subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Atp1b1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"844.94916"	"1688.89104"	"1688.88957"	"0.87"	"0.00073"	"10/104"	"10"	"104"	"166466.887695313"	"HCD"	"MS2"	"0"	"15.0"	"100.000"	"61.3301"	"19955"	"19955"	"19931"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"19.5"	""	"20.1"	""	"27.3"	""	"26.1"	"29.3"	""	"1038"	"28"	"37.000"	"30.000"	"0.0867296028827257"	"14"	"0.001596"	"0.01299"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"563.65863"	"1688.96134"	"1688.96234"	"-0.60"	"-0.00034"	"11/124"	"11"	"124"	"2636279.60119629"	"HCD"	"MS2"	"28.0789"	"60.5"	"100.000"	"98.6703"	"35055"	"35055"	"35041"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"94.3"	""	"72.8"	""	"80.3"	""	"104.0"	""	"116.4"	"105.7"	""	"1001"	"46"	"36.000"	"30.000"	"0.00137532102362775"	"23"	"0"	"1.116E-06"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"563.65881"	"1688.96189"	"1688.96234"	"-0.27"	"-0.00015"	"10/124"	"10"	"124"	"390300.672607422"	"HCD"	"MS2"	"32.2438"	"14.7"	"100.000"	"98.9492"	"35138"	"35138"	"35118"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"20.6"	""	"13.5"	""	"34.7"	""	"28.0"	"26.5"	""	"999"	"28"	"36.000"	"29.000"	"0.0864043271427943"	"22"	"9.9E-05"	"0.0005339"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"844.98499"	"1688.96269"	"1688.96234"	"0.21"	"0.00018"	"11/124"	"11"	"124"	"268721.268127441"	"HCD"	"MS2"	"8.199193"	"21.8"	"100.000"	"98.8383"	"35093"	"35093"	"35078"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"24.5"	""	"27.9"	""	"23.9"	""	"63.1"	"35.8"	""	"994"	"34"	"36.000"	"29.000"	"0.0216948368623362"	"17"	"0.0001991"	"0.00429"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7619"	"0.0000"	"1"	"1"	"1"	"844.98499"	"1688.96269"	"1688.96234"	"0.21"	"0.00018"	"13/124"	"13"	"124"	"391897.587219238"	"HCD"	"MS2"	"0"	"30.3"	"100.000"	"98.5780"	"35018"	"35018"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.8"	""	"37.7"	""	"35.1"	""	"39.6"	""	"91.8"	"43.3"	""	"994"	"42"	"36.000"	"29.000"	"0.00281420926652012"	"25"	"0"	"5.033E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"844.98517"	"1688.96306"	"1688.96234"	"0.42"	"0.00036"	"17/124"	"17"	"124"	"408037.215393066"	"HCD"	"MS2"	"0"	"32.0"	"100.000"	"98.5452"	"34975"	"34975"	"34954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.5"	""	"38.7"	""	"45.8"	""	"42.9"	"1.8"	"83.3"	"43.7"	""	"988"	"45"	"36.000"	"29.000"	"0.00170108865797089"	"26"	"0"	"2.787E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"563.65924"	"1688.96317"	"1688.96234"	"0.49"	"0.00028"	"12/124"	"12"	"124"	"2745308.06311035"	"HCD"	"MS2"	"30.50658"	"62.5"	"100.000"	"98.6375"	"35012"	"35012"	"35000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.5"	""	"90.4"	""	"91.6"	""	"93.1"	""	"121.8"	"112.3"	""	"982"	"58"	"36.000"	"29.000"	"7.76392787281759E-05"	"27"	"0"	"1.544E-06"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"563.65930"	"1688.96335"	"1688.96234"	"0.60"	"0.00034"	"11/124"	"11"	"124"	"403068.643859863"	"HCD"	"MS2"	"36.958"	"13.8"	"100.000"	"98.9777"	"35179"	"35179"	"35162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"16.2"	""	"18.2"	""	"28.1"	""	"23.4"	"27.2"	""	"989"	"27"	"36.000"	"29.000"	"0.0988931694533391"	"21"	"0.0001991"	"0.002124"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNSGAFPAPIEK"	"[K].vnSGAFPAPIEk.[S]"	"N-Term(TMT6plex); N2(Deamidated); K12(TMT6plex)"	"1"	"1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"844.98547"	"1688.96367"	"1688.96234"	"0.79"	"0.00066"	"12/124"	"12"	"124"	"295895.032226563"	"HCD"	"MS2"	"14.21455"	"24.0"	"100.000"	"98.8714"	"35137"	"35137"	"35122"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.0"	""	"30.6"	""	"35.4"	""	"31.4"	""	"59.3"	"41.9"	""	"993"	"43"	"36.000"	"29.000"	"0.00277919649142322"	"26"	"0"	"0.0001249"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTSIGEDYDER"	"[R].iYTSIGEDYDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"845.41089"	"1689.81450"	"1689.81691"	"-1.43"	"-0.00121"	"6/104"	"6"	"104"	"95478.9549560547"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"82.1876"	"28382"	"28382"	"28352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.1"	""	"9.1"	""	"10.4"	""	"8.4"	""	"14.1"	"14.1"	""	"577"	"11"	"34.000"	"27.000"	"2.3288730622679"	"14"	"0.004234"	"0.04818"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYTSIGEDYDER"	"[R].iYTSIGEDYDER.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"P67779"	"Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.41248"	"1689.81767"	"1689.81691"	"0.45"	"0.00038"	"7/104"	"7"	"104"	"115194.079223633"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"82.5005"	"28505"	"28505"	"28476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"7.5"	""	"13.3"	""	"9.2"	""	"15.4"	"13.0"	""	"612"	"3"	"34.000"	"27.000"	"14.8840604941587"	"13"	"0.007601"	"0.09734"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELFPAFSDSR"	"[K].yEELFPAFSDSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"3"	"845.41937"	"1689.83147"	"1689.83217"	"-0.41"	"-0.00035"	"5/106"	"5"	"106"	"157528.109436035"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"112.0742"	"40364"	"40364"	"40335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"13.1"	""	"18.6"	""	"13.3"	""	"17.9"	"15.0"	""	"694"	"16"	"35.000"	"28.000"	"0.836237183754249"	"16"	"0.0001991"	"0.00239"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YEELFPAFSDSR"	"[K].yEELFPAFSDSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"P54921"	"Alpha-soluble NSF attachment protein OS=Rattus norvegicus OX=10116 GN=Napa PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"845.41998"	"1689.83269"	"1689.83217"	"0.31"	"0.00026"	"4/106"	"4"	"106"	"121823.658813477"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"112.0117"	"40325"	"40325"	"40297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"15.6"	""	"17.9"	""	"15.7"	""	"12.9"	"12.9"	""	"705"	"12"	"35.000"	"28.000"	"2.13874556179948"	"13"	"0.004959"	"0.06275"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"563.97870"	"1689.92154"	"1689.92205"	"-0.30"	"-0.00017"	"7/128"	"7"	"128"	"375436.839111328"	"HCD"	"MS2"	"66.56836"	"7.8"	"100.000"	"104.1723"	"37267"	"37267"	"37242"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"8.9"	""	"13.1"	""	"12.0"	""	"10.9"	"17.1"	""	"1066"	"27"	"37.000"	"30.000"	"0.0952197877396142"	"17"	"0"	"0.0001445"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.7447"	"0.0000"	"1"	"1"	"1"	"845.46448"	"1689.92168"	"1689.92205"	"-0.22"	"-0.00018"	"6/128"	"6"	"128"	"158825.890686035"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"104.4727"	"37388"	"37388"	"37373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"12.3"	""	"7.4"	""	"16.5"	""	"16.6"	"17.3"	""	"1063"	"47"	"37.000"	"30.000"	"0.00102920827383762"	"28"	"0"	"0.0001671"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"845.46454"	"1689.92180"	"1689.92205"	"-0.14"	"-0.00012"	"7/128"	"7"	"128"	"140685.826599121"	"HCD"	"MS2"	"4.196826"	"9.2"	"100.000"	"104.2397"	"37277"	"37277"	"37258"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.6"	""	"9.6"	""	"16.2"	""	"18.0"	""	"17.1"	"16.9"	""	"1058"	"58"	"37.000"	"30.000"	"8.57937541502874E-05"	"26"	"0"	"3.422E-06"	"0.955"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVSPWNSEDAK"	"[K].vVSPWNSEDAk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"P49432"	"Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdhb PE=1 SV=2"	"0"	"2"	"2"	"0.4286"	"0.0000"	"1"	"1"	"1"	"845.46478"	"1689.92229"	"1689.92121"	"0.64"	"0.00054"	"6/102"	"6"	"102"	"164090.889770508"	"HCD"	"MS2"	"33.83667"	"11.9"	"100.000"	"80.5153"	"27731"	"27731"	"27700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.6"	""	"16.3"	""	"15.0"	""	"20.6"	""	"20.9"	"25.3"	""	"1062"	"21"	"37.000"	"30.000"	"0.426672370880563"	"26"	"0.002035"	"0.01841"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"563.97919"	"1689.92301"	"1689.92205"	"0.57"	"0.00032"	"10/128"	"10"	"128"	"520572.192626953"	"HCD"	"MS2"	"24.58845"	"6.8"	"100.000"	"103.9555"	"37163"	"37163"	"37137"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"6.0"	""	"7.9"	""	"11.0"	""	"17.4"	"15.8"	""	"1058"	"43"	"37.000"	"30.000"	"0.00246862812186258"	"20"	"0"	"9.472E-06"	"0.864"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"845.46619"	"1689.92510"	"1689.92205"	"1.81"	"0.00153"	"6/128"	"6"	"128"	"138980.818237305"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"104.1769"	"37269"	"37269"	"37242"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"7.9"	""	"9.6"	""	"13.4"	""	"16.5"	"14.7"	""	"1071"	"44"	"37.000"	"30.000"	"0.00200336220019685"	"23"	"0"	"0.0002178"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIDEIVLVGGSTR"	"[K].sDIDEIVLVGGSTR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"845.46637"	"1689.92546"	"1689.92205"	"2.02"	"0.00171"	"6/128"	"6"	"128"	"188508.156005859"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"103.9417"	"37157"	"37157"	"37137"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"11.9"	""	"13.6"	""	"17.3"	""	"21.4"	"22.6"	""	"1073"	"38"	"37.000"	"30.000"	"0.00872106907460134"	"18"	"0"	"0.0003972"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIEAMDPSILK"	"[K].dIEAMDPSILk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.5455"	"0.0000"	"1"	"1"	"1"	"845.47778"	"1689.94829"	"1689.94973"	"-0.85"	"-0.00072"	"8/94"	"8"	"94"	"89453.1318359375"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"109.9970"	"39519"	"39519"	"39497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.1"	""	"8.4"	""	"8.5"	""	"10.4"	""	"12.6"	"13.8"	""	"1068"	"11"	"37.000"	"30.000"	"4.10715655113049"	"18"	"0.005194"	"0.0661"	"0.069"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIEAMDPSILK"	"[K].dIEAMDPSILk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.5319"	"0.0000"	"1"	"1"	"1"	"563.98767"	"1689.94846"	"1689.94973"	"-0.75"	"-0.00042"	"12/94"	"12"	"94"	"307556.739074707"	"HCD"	"MS2"	"34.64869"	"11.7"	"100.000"	"109.9739"	"39510"	"39510"	"39485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"12.6"	""	"21.2"	""	"14.4"	""	"24.1"	"25.3"	""	"1068"	"47"	"37.000"	"30.000"	"0.00108527864383994"	""	"9.9E-05"	"0.000425"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIEAMDPSILK"	"[K].dIEAMDPSILk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"3"	"3"	"0.4545"	"0.0000"	"1"	"1"	"1"	"563.98798"	"1689.94937"	"1689.94973"	"-0.21"	"-0.00012"	"10/94"	"10"	"94"	"318540.195800781"	"HCD"	"MS2"	"36.86964"	"11.9"	"100.000"	"109.7567"	"39410"	"39410"	"39398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.2"	""	"17.3"	""	"19.7"	""	"15.6"	""	"24.9"	"19.8"	""	"1060"	"33"	"37.000"	"30.000"	"0.0269324504557097"	""	"9.9E-05"	"0.0005706"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIEAMDPSILK"	"[K].dIEAMDPSILk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"Q9QUL6"	"Vesicle-fusing ATPase OS=Rattus norvegicus OX=10116 GN=Nsf PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"845.47882"	"1689.95036"	"1689.94973"	"0.38"	"0.00032"	"4/94"	"4"	"94"	"94885.3916015625"	"HCD"	"MS2"	"14.50305"	"7.1"	"100.000"	"109.7334"	"39401"	"39401"	"39385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"9.6"	""	"8.0"	""	"9.3"	""	"12.6"	"15.8"	""	"1063"	"21"	"37.000"	"30.000"	"0.387706666700303"	"21"	"0.00714"	"0.09123"	"0.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNYDIEHVIK"	"[K].tNYDIEHVIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"563.99036"	"1689.95652"	"1689.95759"	"-0.64"	"-0.00036"	"12/98"	"12"	"98"	"2807423.83416748"	"HCD"	"MS2"	"29.81549"	"102.9"	"100.000"	"75.9880"	"25868"	"25868"	"25849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.3"	""	"150.4"	""	"137.6"	""	"176.8"	"0.5"	"166.9"	"169.0"	""	"1042"	"21"	"37.000"	"30.000"	"0.453772030367118"	"18"	"0"	"0.0003139"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNYDIEHVIK"	"[K].tNYDIEHVIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"563.99054"	"1689.95707"	"1689.95759"	"-0.31"	"-0.00018"	"8/98"	"8"	"98"	"9053334.89239502"	"HCD"	"MS2"	"3.727571"	"254.8"	"97.193"	"76.4182"	"26075"	"26075"	"26058"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"344.6"	""	"332.5"	""	"351.4"	""	"401.3"	"1.4"	"481.0"	"503.6"	""	"1040"	"41"	"37.000"	"30.000"	"0.00451859423228877"	"23"	"0"	"1.019E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNYDIEHVIK"	"[K].tNYDIEHVIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"563.99060"	"1689.95725"	"1689.95759"	"-0.20"	"-0.00011"	"6/98"	"6"	"98"	"3510291.24194336"	"HCD"	"MS2"	"16.00287"	"95.4"	"100.000"	"76.5761"	"26107"	"26107"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"148.0"	""	"121.8"	""	"131.3"	""	"148.7"	"1.9"	"174.2"	"177.5"	""	"1034"	"15"	"37.000"	"30.000"	"1.83438522233759"	"15"	"0.0001686"	"0.001157"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNYDIEHVIK"	"[K].tNYDIEHVIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"563.99072"	"1689.95761"	"1689.95759"	"0.01"	"0.00001"	"8/98"	"8"	"98"	"9688678.96478271"	"HCD"	"MS2"	"4.151123"	"268.9"	"98.533"	"76.2743"	"25985"	"25985"	"25968"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"371.8"	""	"356.3"	""	"372.4"	""	"420.0"	"1.1"	"491.2"	"535.5"	""	"1035"	"37"	"37.000"	"30.000"	"0.0104932580735226"	"23"	"0"	"1.463E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNYDIEHVIK"	"[K].tNYDIEHVIk.[K]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"563.99078"	"1689.95780"	"1689.95759"	"0.12"	"0.00007"	"12/98"	"12"	"98"	"3960520.67907715"	"HCD"	"MS2"	"4.599555"	"128.9"	"100.000"	"76.1342"	"25959"	"25959"	"25943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.2"	""	"179.1"	""	"181.8"	""	"211.2"	""	"215.6"	"220.0"	""	"1035"	"24"	"37.000"	"30.000"	"0.215729905945898"	"18"	"0"	"9.209E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9011"	"0.0000"	"1"	"1"	"1"	"845.49213"	"1689.97698"	"1689.97872"	"-1.03"	"-0.00087"	"12/104"	"12"	"104"	"823845.014953613"	"HCD"	"MS2"	"0"	"57.5"	"100.000"	"80.0505"	"27542"	"27542"	"27524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.4"	""	"63.5"	""	"67.6"	""	"94.6"	""	"135.2"	"129.0"	""	"939"	"91"	"36.000"	"29.000"	"3.35456025092454E-08"	"28"	"0"	"5.121E-10"	"1.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"845.49243"	"1689.97759"	"1689.97872"	"-0.67"	"-0.00057"	"11/104"	"11"	"104"	"165564.86517334"	"HCD"	"MS2"	"15.83396"	"14.9"	"100.000"	"80.3564"	"27666"	"27666"	"27646"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"17.6"	""	"16.1"	""	"24.9"	"0.9"	"39.2"	"27.4"	""	"931"	"38"	"36.000"	"29.000"	"0.00671304696134827"	"18"	"0.0001686"	"0.001384"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8539"	"0.0000"	"1"	"1"	"1"	"845.49243"	"1689.97759"	"1689.97872"	"-0.67"	"-0.00057"	"11/104"	"11"	"104"	"294674.863708496"	"HCD"	"MS2"	"0"	"23.3"	"100.000"	"79.6105"	"27336"	"27336"	"27307"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.5"	""	"31.9"	""	"21.1"	""	"44.9"	"0.7"	"53.7"	"46.4"	""	"931"	"89"	"36.000"	"29.000"	"5.90091943556827E-08"	""	"0"	"9.269E-08"	"1.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"845.49268"	"1689.97807"	"1689.97872"	"-0.38"	"-0.00032"	"17/104"	"17"	"104"	"204151.974304199"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"80.2277"	"27587"	"27587"	"27570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"17.4"	""	"20.6"	""	"31.7"	"0.9"	"39.6"	"39.5"	""	"931"	"72"	"36.000"	"29.000"	"2.66636552423904E-06"	""	"0"	"2.468E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9508"	"0.0000"	"1"	"1"	"1"	"563.99762"	"1689.97831"	"1689.97872"	"-0.25"	"-0.00014"	"10/104"	"10"	"104"	"1473218.79547119"	"HCD"	"MS2"	"20.72483"	"39.3"	"100.000"	"79.7398"	"27388"	"27388"	"27367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.2"	""	"41.4"	""	"47.1"	""	"75.3"	""	"81.2"	"88.9"	""	"925"	"61"	"36.000"	"29.000"	"3.42067439714435E-05"	"19"	"0"	"4.519E-07"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8841"	"0.0000"	"1"	"1"	"1"	"563.99774"	"1689.97867"	"1689.97872"	"-0.03"	"-0.00002"	"10/104"	"10"	"104"	"1674568.92932129"	"HCD"	"MS2"	"25.43775"	"40.8"	"100.000"	"79.8706"	"27469"	"27469"	"27445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.6"	""	"55.2"	""	"51.4"	""	"63.3"	"2.6"	"90.4"	"80.4"	""	"917"	"69"	"36.000"	"29.000"	"5.67988234924176E-06"	"24"	"0"	"7.308E-08"	"1.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9296"	"0.0000"	"1"	"1"	"1"	"563.99786"	"1689.97904"	"1689.97872"	"0.19"	"0.00011"	"10/104"	"10"	"104"	"1322014.70751953"	"HCD"	"MS2"	"9.287252"	"36.4"	"100.000"	"80.1699"	"27591"	"27591"	"27570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"38.3"	""	"46.6"	""	"64.3"	"0.8"	"82.9"	"77.0"	""	"923"	"71"	"36.000"	"29.000"	"3.83858980363883E-06"	"22"	"0"	"3.804E-07"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"845.49341"	"1689.97954"	"1689.97872"	"0.48"	"0.00041"	"21/104"	"21"	"104"	"780802.153991699"	"HCD"	"MS2"	"0"	"58.1"	"100.000"	"79.9313"	"27466"	"27466"	"27446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.5"	""	"55.2"	""	"69.3"	""	"113.2"	"0.5"	"126.5"	"128.5"	""	"918"	"96"	"36.000"	"29.000"	"1.27882961640106E-08"	""	"0"	"3.583E-10"	"1.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGDASESALLK"	"[R].aVAGDASESALLk.[C]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.8989"	"0.0000"	"1"	"1"	"1"	"845.49359"	"1689.97991"	"1689.97872"	"0.70"	"0.00059"	"20/104"	"20"	"104"	"281567.711181641"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"79.7299"	"27412"	"27412"	"27382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.2"	""	"26.0"	""	"16.9"	""	"43.9"	""	"38.7"	"40.5"	""	"916"	"89"	"36.000"	"29.000"	"5.68676756877324E-08"	"27"	"0"	"4.86E-07"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAALPGMESTQDR"	"[R].vAAALPGmESTQDR.[S]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"845.93408"	"1690.86089"	"1690.86315"	"-1.34"	"-0.00113"	"4/116"	"4"	"116"	"110490.394592285"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"52.3137"	"16258"	"16258"	"16227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.5"	""	""	""	"6.8"	""	"6.8"	""	"7.4"	"6.5"	""	"929"	"15"	"36.000"	"29.000"	"1.54876568728523"	"22"	"0.0001991"	"0.00322"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"VAAALPGMESTQDR"	"[R].vAAALPGmESTQDR.[S]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"Q9WVB1"	"Ras-related protein Rab-6A OS=Rattus norvegicus OX=10116 GN=Rab6a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"845.93427"	"1690.86125"	"1690.86315"	"-1.12"	"-0.00095"	"5/116"	"5"	"116"	"68822.5338745117"	"HCD"	"MS2"	"100"	"3.2"	"100.000"	"52.0446"	"16182"	"16182"	"16155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.1"	""	""	""	"6.2"	""	"7.7"	""	"8.8"	"4.5"	""	"931"	"12"	"36.000"	"29.000"	"2.66636552423904"	"14"	"0.0001686"	"0.001079"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVDDSITNVK"	"[K].eLVDDSITNVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"845.98334"	"1690.95940"	"1690.96274"	"-1.97"	"-0.00167"	"5/98"	"5"	"98"	"122045.477233887"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"92.3238"	"32496"	"32496"	"32465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"8.0"	""	"11.0"	""	"16.5"	""	"18.1"	"16.4"	""	"1051"	"25"	"37.000"	"30.000"	"0.164654164812784"	"26"	"0.002559"	"0.02597"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELVDDSITNVK"	"[K].eLVDDSITNVk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"P22062"	"Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Pcmt1 PE=1 SV=2"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"845.98511"	"1690.96294"	"1690.96274"	"0.12"	"0.00010"	"6/98"	"6"	"98"	"108703.77734375"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"92.4932"	"32529"	"32529"	"32504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"13.1"	""	"14.6"	""	"19.7"	""	"15.7"	"18.1"	""	"1047"	"33"	"37.000"	"30.000"	"0.0269722195438549"	"26"	"9.9E-05"	"0.0004027"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDKLDASESLR"	"[K].vDkLDASESLR.[K]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32892"	"1690.97220"	"1690.97397"	"-1.05"	"-0.00059"	"8/110"	"8"	"110"	"2155803.93444824"	"HCD"	"MS2"	"9.334304"	"102.2"	"100.000"	"62.6115"	"20473"	"20473"	"20452"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.4"	""	"106.8"	""	"108.3"	""	"193.0"	"16.5"	"199.7"	"201.6"	""	"972"	"15"	"36.000"	"29.000"	"1.3760565099585"	"13"	"0.0001991"	"0.002353"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDKLDASESLR"	"[K].vDkLDASESLR.[K]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32935"	"1690.97348"	"1690.97397"	"-0.29"	"-0.00016"	"8/110"	"8"	"110"	"1204519.48669434"	"HCD"	"MS2"	"17.32599"	"60.8"	"100.000"	"62.9268"	"20601"	"20601"	"20576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.6"	""	"68.5"	""	"66.7"	""	"113.6"	"6.9"	"121.4"	"120.2"	""	"969"	"18"	"36.000"	"29.000"	"0.685952086389206"	"14"	"0.0001991"	"0.002122"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDKLDASESLR"	"[K].vDkLDASESLR.[K]"	"N-Term(TMT6plex); K3(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.32953"	"1690.97403"	"1690.97397"	"0.04"	"0.00002"	"8/110"	"8"	"110"	"2300731.41455078"	"HCD"	"MS2"	"10.91292"	"109.8"	"100.000"	"62.7650"	"20502"	"20502"	"20485"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.2"	""	"112.0"	""	"107.4"	""	"210.0"	"9.5"	"228.6"	"214.1"	""	"961"	"15"	"36.000"	"29.000"	"1.37941006966286"	"13"	"0.0001991"	"0.004451"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMNDAAMFYTNR"	"[K].eMNDAAMFYTNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"846.38861"	"1691.76995"	"1691.77189"	"-1.15"	"-0.00097"	"4/124"	"4"	"124"	"108529.168884277"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"84.2767"	"29224"	"29224"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"11.5"	""	"8.3"	""	"12.3"	""	"15.4"	"12.4"	""	"311"	"3"	"31.000"	"24.000"	"8.68421152815772"	"13"	"0.003043"	"0.03267"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMNDAAMFYTNR"	"[K].eMNDAAMFYTNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"846.38947"	"1691.77165"	"1691.77189"	"-0.14"	"-0.00012"	"4/124"	"4"	"124"	"103745.626403809"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"84.2715"	"29250"	"29250"	"29219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"9.9"	""	"8.0"	""	"9.7"	""	"14.3"	"10.6"	""	"311"	"10"	"31.000"	"24.000"	"1.57300605137414"	"18"	"0.002834"	"0.03051"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMNDAAMFYTNR"	"[K].eMNDAAMFYTNR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"Q08163"	"Adenylyl cyclase-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cap1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.59552"	"1691.77201"	"1691.77189"	"0.07"	"0.00004"	"10/124"	"10"	"124"	"356216.842712402"	"HCD"	"MS2"	"48.36507"	"13.4"	"100.000"	"84.3107"	"29266"	"29266"	"29235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.7"	""	"21.9"	""	"17.8"	""	"25.5"	""	"23.3"	"25.1"	""	"317"	"13"	"32.000"	"25.000"	"0.770955421020967"	"13"	"9.9E-05"	"0.0006907"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIGEVILVGGMTR"	"[K].sDIGEVILVGGmTR.[M]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"846.46234"	"1691.91741"	"1691.91994"	"-1.50"	"-0.00127"	"4/128"	"4"	"128"	"90330.4506225586"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"101.5053"	"36175"	"36175"	"36150"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"4.3"	""	"5.1"	""	"11.9"	""	"9.9"	"13.5"	""	"1104"	"11"	"37.000"	"30.000"	"4.64450118188148"	"16"	"0.002035"	"0.01823"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIGEVILVGGMTR"	"[K].sDIGEVILVGGmTR.[M]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"846.46234"	"1691.91741"	"1691.91994"	"-1.50"	"-0.00127"	"9/128"	"9"	"128"	"88721.3158569336"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"101.6367"	"36254"	"36254"	"36224"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.7"	""	"5.2"	""	"8.7"	""	"12.0"	""	"8.9"	"10.1"	""	"1104"	"12"	"37.000"	"30.000"	"3.83653423309016"	"16"	"0.004234"	"0.04928"	"0.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIGEVILVGGMTR"	"[K].sDIGEVILVGGmTR.[M]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.5152"	"0.0000"	"1"	"1"	"1"	"564.64417"	"1691.91794"	"1691.91994"	"-1.18"	"-0.00067"	"12/128"	"12"	"128"	"274933.800598145"	"HCD"	"MS2"	"10.64801"	"6.1"	"100.000"	"101.7357"	"36294"	"36294"	"36272"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"8.5"	""	"12.1"	""	"10.4"	""	"10.9"	"11.2"	""	"1125"	"33"	"37.000"	"30.000"	"0.0305578311464494"	"30"	"0"	"0.0002937"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDIGEVILVGGMTR"	"[K].sDIGEVILVGGmTR.[M]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"564.64490"	"1691.92014"	"1691.91994"	"0.12"	"0.00007"	"13/128"	"13"	"128"	"303334.281677246"	"HCD"	"MS2"	"6.171288"	"6.9"	"100.000"	"101.5353"	"36187"	"36187"	"36164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"10.8"	""	"8.3"	""	"13.6"	""	"12.9"	"11.8"	""	"1118"	"39"	"37.000"	"30.000"	"0.00646266743385383"	"27"	"0"	"3.345E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8269"	"0.0000"	"1"	"1"	"1"	"846.46448"	"1691.92168"	"1691.92160"	"0.05"	"0.00004"	"15/106"	"15"	"106"	"356505.384094238"	"HCD"	"MS2"	"0"	"31.9"	"100.000"	"50.0353"	"15369"	"15369"	"15339"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.7"	""	"40.8"	""	"44.0"	""	"48.9"	"1.1"	"57.8"	"39.2"	""	"1112"	"52"	"37.000"	"30.000"	"0.000390009145921504"	"24"	"0"	"0.0001229"	"0.635"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGGTSDVEVNEK"	"[K].vGGTSDVEVNEk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"P63039"	"60 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspd1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"846.46460"	"1691.92192"	"1691.92160"	"0.19"	"0.00016"	"13/106"	"13"	"106"	"266314.53503418"	"HCD"	"MS2"	"0"	"24.4"	"100.000"	"50.3612"	"15466"	"15466"	"15446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.5"	""	"38.4"	""	"32.6"	""	"36.1"	""	"40.0"	"40.4"	""	"1112"	"28"	"37.000"	"30.000"	"0.0977405529361032"	"15"	"0.0001991"	"0.002244"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVLIGEGAGFK"	"[K].eNVLIGEGAGFk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"846.48901"	"1691.97075"	"1691.97324"	"-1.47"	"-0.00125"	"8/120"	"8"	"120"	"89072.6062011719"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"99.4441"	"35367"	"35367"	"35343"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.6"	""	"13.8"	""	"9.8"	""	"11.0"	""	"17.8"	"10.8"	""	"894"	"22"	"36.000"	"29.000"	"0.293973053297873"	"20"	"0.0001991"	"0.00593"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENVLIGEGAGFK"	"[K].eNVLIGEGAGFk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"846.48907"	"1691.97087"	"1691.97324"	"-1.40"	"-0.00118"	"9/120"	"9"	"120"	"115331.58972168"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"99.4314"	"35333"	"35333"	"35306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"13.5"	""	"10.8"	""	"13.6"	""	"23.8"	"14.8"	""	"896"	"26"	"36.000"	"29.000"	"0.102867459435434"	"19"	"0.0001991"	"0.002276"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSSTPEEVK"	"[R].kSSTPEEVk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"564.67609"	"1692.01371"	"1692.01466"	"-0.57"	"-0.00032"	"8/90"	"8"	"90"	"5084117.23864746"	"HCD"	"MS2"	"7.414932"	"235.5"	"100.000"	"33.0397"	"8441"	"8441"	"8419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"373.3"	""	"253.0"	""	"289.7"	""	"436.8"	""	"451.1"	"430.3"	""	"619"	"16"	"34.000"	"27.000"	"0.772077067988844"	"14"	"0.001615"	"0.0131"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSSTPEEVK"	"[R].kSSTPEEVk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.67633"	"1692.01444"	"1692.01466"	"-0.13"	"-0.00007"	"8/90"	"8"	"90"	"4452490.88696289"	"HCD"	"MS2"	"16.22516"	"204.8"	"100.000"	"33.0162"	"8469"	"8469"	"8446"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"302.2"	""	"230.8"	""	"244.5"	""	"380.5"	""	"410.0"	"376.5"	""	"615"	"14"	"34.000"	"27.000"	"1.14774423522184"	"13"	"0.001316"	"0.01049"	"0.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSSTPEEVK"	"[R].kSSTPEEVk.[K]"	"N-Term(TMT6plex); K1(TMT6plex); K9(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.67639"	"1692.01462"	"1692.01466"	"-0.02"	"-0.00001"	"8/90"	"8"	"90"	"3235753.62573242"	"HCD"	"MS2"	"47.23728"	"155.8"	"100.000"	"33.1196"	"8511"	"8511"	"8490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"181.3"	""	"162.9"	""	"183.7"	""	"318.2"	""	"325.2"	"310.8"	""	"614"	"6"	"34.000"	"27.000"	"8.13089542552256"	"13"	"0.005266"	"0.06737"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.8636"	"0.0000"	"1"	"1"	"1"	"564.97528"	"1692.91129"	"1692.91181"	"-0.31"	"-0.00018"	"13/136"	"13"	"136"	"1623310.61981201"	"HCD"	"MS2"	"40.09492"	"33.3"	"100.000"	"74.7531"	"25366"	"25366"	"25349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.8"	""	"36.2"	""	"43.0"	""	"60.5"	""	"71.1"	"70.2"	""	"1101"	"22"	"37.000"	"30.000"	"0.382610886832633"	"17"	"0"	"3.95E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"564.97528"	"1692.91129"	"1692.91181"	"-0.31"	"-0.00018"	"13/136"	"13"	"136"	"2628655.82275391"	"HCD"	"MS2"	"33.50496"	"37.1"	"100.000"	"75.0758"	"25497"	"25497"	"25476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.2"	""	"45.2"	""	"47.0"	""	"65.5"	"0.4"	"74.1"	"68.2"	""	"1101"	"26"	"37.000"	"30.000"	"0.128456866328569"	"17"	"0"	"4.161E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"846.95929"	"1692.91130"	"1692.91181"	"-0.30"	"-0.00026"	"10/136"	"10"	"136"	"442716.933654785"	"HCD"	"MS2"	"22.75139"	"27.0"	"100.000"	"75.3512"	"25640"	"25640"	"25623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.4"	""	"34.7"	""	"37.5"	""	"38.7"	"0.7"	"42.8"	"48.7"	""	"1101"	"31"	"37.000"	"30.000"	"0.0399721329568053"	"22"	"0"	"0.0002901"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"846.95935"	"1692.91142"	"1692.91181"	"-0.23"	"-0.00020"	"5/136"	"5"	"136"	"261341.112487793"	"HCD"	"MS2"	"21.94083"	"18.3"	"100.000"	"75.2717"	"25577"	"25577"	"25553"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"28.2"	""	"26.4"	""	"29.8"	""	"30.8"	"32.9"	""	"1098"	"26"	"37.000"	"30.000"	"0.148789520590807"	"18"	"9.9E-05"	"0.0007803"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"564.97534"	"1692.91147"	"1692.91181"	"-0.20"	"-0.00011"	"15/136"	"15"	"136"	"3037930.784729"	"HCD"	"MS2"	"38.07611"	"34.8"	"100.000"	"75.1645"	"25565"	"25565"	"25550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"40.3"	""	"37.5"	""	"62.8"	""	"80.7"	"64.0"	""	"1097"	"27"	"37.000"	"30.000"	"0.105481581330722"	"16"	"0"	"3.026E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"846.95959"	"1692.91191"	"1692.91181"	"0.06"	"0.00005"	"8/136"	"8"	"136"	"1634513.50238037"	"HCD"	"MS2"	"26.90252"	"79.3"	"100.000"	"75.0560"	"25520"	"25520"	"25502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.1"	""	"113.0"	""	"116.5"	""	"111.1"	"1.6"	"132.7"	"134.0"	""	"1098"	"40"	"37.000"	"30.000"	"0.00545220710583092"	"19"	"0"	"1.254E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"846.95959"	"1692.91191"	"1692.91181"	"0.06"	"0.00005"	"14/136"	"14"	"136"	"1683296.04022217"	"HCD"	"MS2"	"24.59158"	"86.2"	"100.000"	"74.9558"	"25448"	"25448"	"25432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"164.3"	""	"117.0"	""	"117.8"	""	"123.7"	"0.4"	"152.7"	"139.2"	""	"1098"	"33"	"37.000"	"30.000"	"0.0259760041169853"	"21"	"0"	"3.585E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"564.97552"	"1692.91202"	"1692.91181"	"0.12"	"0.00007"	"15/136"	"15"	"136"	"1734393.59735107"	"HCD"	"MS2"	"59.868"	"27.2"	"100.000"	"74.8854"	"25451"	"25451"	"25430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.3"	""	"38.1"	""	"29.8"	""	"41.4"	""	"64.7"	"51.4"	""	"1098"	"24"	"37.000"	"30.000"	"0.21856083663387"	"16"	"0"	"5.133E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"846.96088"	"1692.91448"	"1692.91181"	"1.57"	"0.00133"	"5/136"	"5"	"136"	"145882.581665039"	"HCD"	"MS2"	"100"	"12.5"	"100.000"	"74.7632"	"25402"	"25402"	"25379"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"15.3"	""	"16.2"	""	"18.2"	""	"22.5"	"19.8"	""	"1086"	"10"	"37.000"	"30.000"	"4.92946547886755"	"13"	"0.0001991"	"0.003357"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQFTITPGSEQIR"	"[K].sQFTITPGSEQIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.7391"	"0.0000"	"1"	"1"	"1"	"846.96234"	"1692.91741"	"1692.91181"	"3.30"	"0.00280"	"5/136"	"5"	"136"	"300510.584899902"	"HCD"	"MS2"	"38.40767"	"19.2"	"100.000"	"74.6700"	"25333"	"25333"	"25314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"26.3"	""	"26.4"	""	"26.7"	""	"36.0"	"34.2"	""	"1085"	"23"	"37.000"	"30.000"	"0.298125924067761"	"20"	"9.9E-05"	"0.0007958"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"565.00214"	"1692.99186"	"1692.99364"	"-1.06"	"-0.00060"	"7/102"	"7"	"102"	"593135.732788086"	"HCD"	"MS2"	"32.68427"	"15.9"	"100.000"	"107.2676"	"38496"	"38496"	"38479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"22.5"	""	"19.3"	""	"32.7"	""	"31.7"	"23.3"	""	"807"	"38"	"36.000"	"29.000"	"0.00683665302480498"	"28"	"0"	"1.407E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"565.00256"	"1692.99314"	"1692.99364"	"-0.30"	"-0.00017"	"7/102"	"7"	"102"	"1263664.9095459"	"HCD"	"MS2"	"6.880951"	"29.8"	"100.000"	"107.2534"	"38471"	"38471"	"38460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.1"	""	"36.3"	""	"45.0"	""	"53.6"	"0.4"	"48.2"	"63.5"	""	"801"	"40"	"36.000"	"29.000"	"0.00427171746552718"	"29"	"0"	"3.193E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"565.00262"	"1692.99332"	"1692.99364"	"-0.19"	"-0.00011"	"7/102"	"7"	"102"	"603937.588378906"	"HCD"	"MS2"	"8.852939"	"17.8"	"100.000"	"106.9748"	"38363"	"38363"	"38344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.5"	""	"23.8"	""	"27.9"	""	"24.4"	""	"32.5"	"38.9"	""	"776"	"39"	"35.000"	"28.000"	"0.0044548360514079"	"28"	"0"	"6.434E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.6341"	"0.0000"	"1"	"1"	"1"	"847.00031"	"1692.99333"	"1692.99364"	"-0.18"	"-0.00015"	"9/102"	"9"	"102"	"405890.748168945"	"HCD"	"MS2"	"0"	"34.7"	"100.000"	"107.2578"	"38472"	"38472"	"38460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"45.9"	""	"53.0"	""	"54.7"	""	"61.2"	"72.9"	""	"776"	"41"	"35.000"	"28.000"	"0.00334835676533584"	""	"0"	"2.021E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"847.00043"	"1692.99358"	"1692.99364"	"-0.04"	"-0.00003"	"8/102"	"8"	"102"	"163456.156799316"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"107.2653"	"38495"	"38495"	"38479"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"16.6"	""	"19.0"	""	"25.2"	""	"28.5"	"30.1"	""	"781"	"42"	"35.000"	"28.000"	"0.00223676850099966"	""	"0"	"4.977E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"565.00275"	"1692.99369"	"1692.99364"	"0.03"	"0.00001"	"7/102"	"7"	"102"	"1224707.31445313"	"HCD"	"MS2"	"9.883696"	"31.8"	"100.000"	"107.5463"	"38603"	"38603"	"38591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"35.7"	""	"43.2"	""	"58.4"	"0.4"	"53.8"	"70.3"	""	"780"	"40"	"35.000"	"28.000"	"0.00415015777107483"	""	"0"	"4.095E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"847.00092"	"1692.99455"	"1692.99364"	"0.54"	"0.00046"	"10/102"	"10"	"102"	"423156.688232422"	"HCD"	"MS2"	"0"	"37.0"	"100.000"	"107.5438"	"38602"	"38602"	"38591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.4"	""	"42.2"	""	"57.7"	""	"52.8"	"1.2"	"66.2"	"78.9"	""	"759"	"55"	"35.000"	"28.000"	"0.000124512163736429"	""	"0"	"3.04E-07"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TAAENEFVLLK"	"[R].tAAENEFVLLk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"Q6IG12"	"Keratin, type II cytoskeletal 7 OS=Rattus norvegicus OX=10116 GN=Krt7 PE=3 SV=1"	"0"	"2"	"2"	"0.7111"	"0.0000"	"1"	"1"	"1"	"847.00092"	"1692.99455"	"1692.99364"	"0.54"	"0.00046"	"9/102"	"9"	"102"	"214649.893371582"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"106.9794"	"38365"	"38365"	"38344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"21.6"	""	"25.2"	""	"28.9"	""	"28.2"	"33.3"	""	"759"	"45"	"35.000"	"28.000"	"0.00112774725904458"	"28"	"0"	"5.485E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FISGHTSELGDFR"	"[K].fISGHTSELGDFR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"O88941"	"Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus OX=10116 GN=Mogs PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.62775"	"1694.86869"	"1694.86995"	"-0.75"	"-0.00042"	"11/112"	"11"	"112"	"550473.599609375"	"HCD"	"MS2"	"36.34407"	"15.9"	"100.000"	"79.5247"	"27328"	"27328"	"27305"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"18.5"	""	"16.8"	""	"26.2"	""	"36.5"	"33.2"	""	"958"	"13"	"36.000"	"29.000"	"2.15444550493885"	"13"	"9.9E-05"	"0.0004117"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQnAVLVR.[Y]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.1786"	"0.0000"	"1"	"1"	"1"	"848.46600"	"1695.92473"	"1695.92674"	"-1.18"	"-0.00100"	"19/108"	"19"	"108"	"401581.807373047"	"HCD"	"MS2"	"25.8858"	"21.3"	"100.000"	"110.6231"	"39760"	"39760"	"39735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.5"	""	"33.4"	""	"35.9"	""	"25.8"	""	"33.6"	"35.2"	""	"1013"	"56"	"37.000"	"30.000"	"0.000120942641479552"	"21"	"0"	"2.388E-07"	"1.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGEYGFQNAVLVR"	"[K].lGEYGFQnAVLVR.[Y]"	"N-Term(TMT6plex); N8(Deamidated)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.2586"	"0.0000"	"1"	"1"	"1"	"848.46643"	"1695.92558"	"1695.92674"	"-0.68"	"-0.00058"	"9/108"	"9"	"108"	"308324.313110352"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"110.7552"	"39827"	"39827"	"39804"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"22.0"	""	"26.1"	""	"22.8"	"1.4"	"28.4"	"34.4"	""	"1038"	"58"	"37.000"	"30.000"	"8.55396281201739E-05"	"26"	"0"	"3.667E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLIPAANTGESK"	"[K].hLIPAANTGESk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"565.99854"	"1695.98105"	"1695.97939"	"0.98"	"0.00055"	"10/104"	"10"	"104"	"3577267.42248535"	"HCD"	"MS2"	"21.79972"	"158.2"	"100.000"	"42.4325"	"12280"	"12280"	"12258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"229.0"	""	"179.5"	""	"193.4"	""	"270.1"	"9.3"	"299.8"	"319.2"	""	"782"	"27"	"35.000"	"28.000"	"0.0753662241057656"	"14"	"0"	"2.73E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42133"	"1697.83537"	"1697.83660"	"-0.72"	"-0.00061"	"4/126"	"4"	"126"	"138733.684814453"	"HCD"	"MS2"	"100"	"9.6"	"100.000"	"67.5313"	"22468"	"22468"	"22448"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"15.9"	""	"9.8"	""	"11.4"	""	"20.8"	"16.8"	""	"740"	"17"	"35.000"	"28.000"	"0.798365431386487"	"14"	"0.0001991"	"0.003964"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42139"	"1697.83550"	"1697.83660"	"-0.65"	"-0.00055"	"14/126"	"14"	"126"	"473897.536132813"	"HCD"	"MS2"	"0"	"26.1"	"100.000"	"68.1533"	"22720"	"22720"	"22699"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.1"	""	"36.7"	""	"34.8"	""	"30.1"	""	"48.4"	"48.4"	""	"740"	"31"	"35.000"	"28.000"	"0.0278100470786736"	"14"	"0"	"5.352E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.42181"	"1697.83635"	"1697.83660"	"-0.15"	"-0.00012"	"16/126"	"16"	"126"	"501219.762756348"	"HCD"	"MS2"	"5.20486"	"26.7"	"100.000"	"68.0898"	"22662"	"22662"	"22643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.3"	""	"33.8"	""	"34.2"	""	"33.5"	""	"50.7"	"52.8"	""	"738"	"36"	"35.000"	"28.000"	"0.00993176342649031"	"15"	"0"	"6.546E-05"	"0.692"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9787"	"0.0000"	"1"	"1"	"1"	"849.42181"	"1697.83635"	"1697.83660"	"-0.15"	"-0.00012"	"11/126"	"11"	"126"	"1159599.3770752"	"HCD"	"MS2"	"4.547331"	"54.5"	"100.000"	"67.7859"	"22539"	"22539"	"22529"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.3"	""	"78.1"	""	"80.5"	""	"62.7"	"3.4"	"100.4"	"92.3"	""	"738"	"47"	"35.000"	"28.000"	"0.000659213915120407"	"17"	"0"	"4.634E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.7838"	"0.0000"	"1"	"1"	"1"	"849.42181"	"1697.83635"	"1697.83660"	"-0.15"	"-0.00012"	"17/126"	"17"	"126"	"1071592.79302979"	"HCD"	"MS2"	"3.963775"	"54.1"	"100.000"	"67.8586"	"22600"	"22600"	"22579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.4"	""	"73.9"	""	"75.5"	""	"54.8"	"1.6"	"98.4"	"109.2"	""	"738"	"37"	"35.000"	"28.000"	"0.00805427337470068"	"22"	"0"	"6.33E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSMR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"849.42218"	"1697.83708"	"1697.83660"	"0.28"	"0.00024"	"6/126"	"6"	"126"	"216266.330932617"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"67.5048"	"22426"	"22426"	"22402"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.8"	""	"15.0"	""	"16.6"	""	"14.4"	""	"22.6"	"24.4"	""	"746"	"18"	"35.000"	"28.000"	"0.563259897503227"	"15"	"0.0001686"	"0.001427"	"0.416"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAFSNPESLDLYR"	"[R].gAFSNPESLDLYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JMI1"	"Acetoacetyl-CoA synthetase OS=Rattus norvegicus OX=10116 GN=Aacs PE=1 SV=1"	"Q9JMI1"	"Acetoacetyl-CoA synthetase OS=Rattus norvegicus OX=10116 GN=Aacs PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"849.43951"	"1697.87175"	"1697.86962"	"1.26"	"0.00107"	"5/124"	"5"	"124"	"116476.030395508"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"100.4094"	"35731"	"35731"	"35708"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"7.5"	""	"12.0"	""	"12.5"	""	"14.3"	"14.5"	""	"900"	"22"	"36.000"	"29.000"	"0.318575602972862"	"14"	"0.001348"	"0.01113"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"849.45953"	"1697.91179"	"1697.91506"	"-1.92"	"-0.00163"	"12/94"	"12"	"94"	"260625.072753906"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"105.2758"	"37687"	"37687"	"37660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.6"	""	"30.2"	""	"32.0"	""	"34.1"	""	"40.7"	"40.8"	""	"1020"	"40"	"37.000"	"30.000"	"0.00514718971899109"	"19"	"9.9E-05"	"0.000801"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"566.64301"	"1697.91446"	"1697.91506"	"-0.35"	"-0.00020"	"12/94"	"12"	"94"	"1114275.78826904"	"HCD"	"MS2"	"6.836225"	"36.1"	"100.000"	"105.6154"	"37841"	"37841"	"37822"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.2"	""	"50.8"	""	"46.4"	""	"65.0"	""	"64.3"	"62.3"	""	"1027"	"56"	"37.000"	"30.000"	"0.000128985368258017"	"22"	"0"	"1.707E-05"	"0.812"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8704"	"0.0000"	"1"	"1"	"1"	"566.64307"	"1697.91465"	"1697.91506"	"-0.24"	"-0.00014"	"12/94"	"12"	"94"	"1673442.34002686"	"HCD"	"MS2"	"43.93406"	"49.8"	"100.000"	"105.3932"	"37734"	"37734"	"37718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"65.9"	""	"70.1"	""	"84.4"	""	"89.9"	"88.9"	""	"1028"	"54"	"37.000"	"30.000"	"0.000225924390335042"	"23"	"0"	"2.884E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"566.64319"	"1697.91501"	"1697.91506"	"-0.03"	"-0.00002"	"11/94"	"11"	"94"	"1113102.46069336"	"HCD"	"MS2"	"22.97752"	"37.8"	"100.000"	"105.9021"	"37956"	"37956"	"37944"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.9"	""	"50.5"	""	"52.9"	""	"64.0"	""	"66.7"	"67.1"	""	"1019"	"37"	"37.000"	"30.000"	"0.00927137587461788"	"19"	"0"	"0.0001887"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"849.46118"	"1697.91509"	"1697.91506"	"0.02"	"0.00001"	"18/94"	"18"	"94"	"1257410.02911377"	"HCD"	"MS2"	"0"	"104.3"	"100.000"	"105.5409"	"37793"	"37793"	"37785"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.1"	""	"117.9"	""	"140.8"	""	"164.1"	"0.8"	"196.8"	"198.4"	""	"1019"	"72"	"37.000"	"30.000"	"3.48452984289888E-06"	"26"	"0"	"5.249E-07"	"1.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"566.64331"	"1697.91538"	"1697.91506"	"0.19"	"0.00011"	"11/94"	"11"	"94"	"903183.822875977"	"HCD"	"MS2"	"33.58502"	"29.6"	"100.000"	"105.6725"	"37846"	"37846"	"37834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	""	"43.1"	""	"35.8"	""	"44.6"	""	"56.0"	"58.2"	""	"1019"	"29"	"37.000"	"30.000"	"0.0612553729437572"	"16"	"9.9E-05"	"0.0006585"	"0.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"849.46143"	"1697.91557"	"1697.91506"	"0.30"	"0.00026"	"17/94"	"17"	"94"	"1026917.31390381"	"HCD"	"MS2"	"0"	"87.0"	"100.000"	"105.8373"	"37930"	"37930"	"37915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.6"	""	"101.4"	""	"119.3"	""	"141.1"	""	"157.1"	"168.8"	""	"1018"	"66"	"37.000"	"30.000"	"1.3699912151988E-05"	"29"	"0"	"1.39E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"849.46149"	"1697.91570"	"1697.91506"	"0.38"	"0.00032"	"7/94"	"7"	"94"	"93366.6701049805"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"105.8529"	"37919"	"37919"	"37894"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"9.6"	""	"11.5"	""	"8.4"	""	"17.4"	"18.6"	""	"1029"	"17"	"37.000"	"30.000"	"1.02184583498037"	"21"	"0.002875"	"0.03093"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFSDPFVEAEK"	"[R].aFSDPFVEAEk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"849.46222"	"1697.91716"	"1697.91506"	"1.24"	"0.00105"	"11/94"	"11"	"94"	"199093.335083008"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"105.5256"	"37805"	"37805"	"37777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"14.3"	""	"22.2"	""	"25.8"	""	"28.0"	"30.4"	""	"1024"	"33"	"37.000"	"30.000"	"0.0272439428744598"	"18"	"0.0001686"	"0.00117"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"849.95905"	"1698.91081"	"1698.91368"	"-1.69"	"-0.00143"	"8/90"	"8"	"90"	"282746.976928711"	"HCD"	"MS2"	"0"	"21.5"	"100.000"	"73.0257"	"24695"	"24695"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.1"	""	"21.7"	""	"25.8"	""	"57.5"	""	"36.8"	"34.2"	""	"959"	"40"	"36.000"	"29.000"	"0.00538007848837791"	"21"	"0.001596"	"0.01294"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"566.97589"	"1698.91312"	"1698.91368"	"-0.33"	"-0.00019"	"7/90"	"7"	"90"	"3356694.3067627"	"HCD"	"MS2"	"5.038922"	"92.4"	"100.000"	"73.2296"	"24748"	"24748"	"24730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.7"	""	"100.9"	""	"113.4"	""	"250.9"	"0.2"	"167.7"	"142.7"	""	"941"	"49"	"36.000"	"29.000"	"0.000660023847996402"	"29"	"0"	"0.000156"	"0.614"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"849.96027"	"1698.91326"	"1698.91368"	"-0.25"	"-0.00021"	"9/90"	"9"	"90"	"351851.314086914"	"HCD"	"MS2"	"0"	"29.0"	"100.000"	"72.9300"	"24626"	"24626"	"24602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"34.4"	""	"34.5"	""	"78.6"	""	"52.8"	"35.3"	""	"941"	"43"	"36.000"	"29.000"	"0.00245222111574941"	"18"	"0.0001991"	"0.003764"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7632"	"0.0000"	"1"	"1"	"1"	"849.96027"	"1698.91326"	"1698.91368"	"-0.25"	"-0.00021"	"9/90"	"9"	"90"	"994446.164123535"	"HCD"	"MS2"	"0"	"73.3"	"100.000"	"73.3391"	"24822"	"24822"	"24803"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.0"	""	"76.8"	""	"85.9"	""	"205.0"	"0.6"	"118.2"	"120.8"	""	"941"	"38"	"36.000"	"29.000"	"0.00827103060367566"	"24"	"0.0001686"	"0.001259"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"566.97595"	"1698.91330"	"1698.91368"	"-0.22"	"-0.00013"	"7/90"	"7"	"90"	"3507841.64135742"	"HCD"	"MS2"	"5.561731"	"92.1"	"100.000"	"73.3368"	"24821"	"24821"	"24803"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.5"	""	"94.7"	""	"112.6"	""	"242.1"	"1.6"	"168.3"	"146.3"	""	"941"	"49"	"36.000"	"29.000"	"0.000660023847996402"	"29"	"0"	"9.717E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"849.96033"	"1698.91338"	"1698.91368"	"-0.18"	"-0.00015"	"9/90"	"9"	"90"	"991308.868225098"	"HCD"	"MS2"	"0"	"75.6"	"100.000"	"73.2319"	"24749"	"24749"	"24730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.9"	""	"89.3"	""	"81.5"	""	"211.9"	""	"127.6"	"118.2"	""	"939"	"44"	"36.000"	"29.000"	"0.00174034598876919"	"28"	"0.001615"	"0.01309"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.7273"	"0.0000"	"1"	"1"	"1"	"566.97632"	"1698.91440"	"1698.91368"	"0.43"	"0.00024"	"7/90"	"7"	"90"	"1097470.39666748"	"HCD"	"MS2"	"31.74199"	"37.4"	"100.000"	"73.0211"	"24693"	"24693"	"24664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.9"	""	"40.8"	""	"43.2"	""	"101.8"	""	"65.9"	"60.6"	""	"929"	"44"	"36.000"	"29.000"	"0.00192302848953765"	"27"	"0"	"8.601E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VVMDYNNLEK"	"[K].vVmDYNNLEk.[A]"	"N-Term(TMT6plex); M3(Oxidation); K10(TMT6plex)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"566.97632"	"1698.91440"	"1698.91368"	"0.43"	"0.00024"	"7/90"	"7"	"90"	"1123787.66278076"	"HCD"	"MS2"	"6.464874"	"37.1"	"100.000"	"72.9068"	"24617"	"24617"	"24586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.0"	""	"38.5"	""	"48.9"	""	"91.0"	""	"70.1"	"57.6"	""	"929"	"27"	"36.000"	"29.000"	"0.0833653769663709"	"21"	"9.9E-05"	"0.0004015"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTNGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"566.98889"	"1698.95212"	"1698.95390"	"-1.05"	"-0.00059"	"12/108"	"12"	"108"	"5665406.97851563"	"HCD"	"MS2"	"9.867914"	"148.8"	"100.000"	"29.6141"	"7067"	"7067"	"7047"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"289.2"	""	"188.8"	""	"212.6"	""	"229.4"	""	"235.5"	"251.0"	""	"863"	"57"	"36.000"	"29.000"	"8.27905561599229E-05"	"22"	"0"	"1.197E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTNGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"566.98901"	"1698.95249"	"1698.95390"	"-0.83"	"-0.00047"	"12/108"	"12"	"108"	"5330449.81750488"	"HCD"	"MS2"	"33.32547"	"148.2"	"100.000"	"29.4017"	"7021"	"7021"	"7000"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"264.1"	""	"200.2"	""	"190.5"	""	"223.7"	""	"262.1"	"265.7"	""	"865"	"57"	"36.000"	"29.000"	"8.20325310923822E-05"	"25"	"0"	"6.306E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAQGADSVEPMFR"	"[K].yAQGADSVEPMFR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.42029"	"1699.83330"	"1699.83112"	"1.28"	"0.00109"	"4/122"	"4"	"122"	"95613.5177001953"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"83.4575"	"28893"	"28893"	"28864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"8.7"	""	"6.3"	""	"11.6"	""	"14.5"	"16.9"	""	"616"	"6"	"34.000"	"27.000"	"7.2535517943997"	"13"	"0.004234"	"0.05003"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAGSATLSMAYAGAR"	"[K].aGAGSATLSmAYAGAR.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.43341"	"1699.85954"	"1699.86348"	"-2.32"	"-0.00197"	"9/128"	"9"	"128"	"276822.198364258"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"51.0473"	"15781"	"15781"	"15750"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.9"	""	"10.4"	""	"19.1"	""	"43.8"	""	"26.6"	"32.0"	""	"798"	"29"	"36.000"	"29.000"	"0.0525984438684007"	"14"	"9.9E-05"	"0.001013"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAGSATLSMAYAGAR"	"[K].aGAGSATLSmAYAGAR.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"850.43378"	"1699.86028"	"1699.86348"	"-1.89"	"-0.00160"	"11/128"	"11"	"128"	"321232.553710938"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"51.4235"	"15897"	"15897"	"15869"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"14.9"	""	"21.8"	""	"42.9"	""	"31.6"	"32.7"	""	"797"	"47"	"36.000"	"29.000"	"0.000826853036705782"	"22"	"0"	"1.725E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAGSATLSMAYAGAR"	"[K].aGAGSATLSmAYAGAR.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"850.43567"	"1699.86406"	"1699.86348"	"0.34"	"0.00029"	"20/128"	"20"	"128"	"301626.557617188"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"51.3572"	"15903"	"15903"	"15885"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"9.6"	""	"16.6"	""	"45.1"	""	"32.7"	"29.6"	""	"829"	"67"	"36.000"	"29.000"	"7.52531242219465E-06"	"24"	"0"	"2.613E-07"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGAGSATLSMAYAGAR"	"[K].aGAGSATLSmAYAGAR.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"P04636"	"Malate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mdh2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.43634"	"1699.86540"	"1699.86348"	"1.13"	"0.00096"	"11/128"	"11"	"128"	"266549.207397461"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"51.7257"	"16019"	"16019"	"15994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"10.5"	""	"10.2"	""	"40.1"	""	"25.9"	"27.3"	""	"831"	"56"	"36.000"	"29.000"	"0.000114175002061405"	"16"	"0"	"3.278E-06"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"567.30957"	"1699.91416"	"1699.91545"	"-0.76"	"-0.00043"	"8/94"	"8"	"94"	"2599850.80163574"	"HCD"	"MS2"	"4.666077"	"80.5"	"100.000"	"75.6877"	"25778"	"25778"	"25761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.0"	""	"97.2"	""	"119.5"	""	"118.9"	"0.5"	"147.8"	"156.0"	""	"965"	"36"	"36.000"	"29.000"	"0.012373635476198"	"20"	"0"	"5.899E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"850.46106"	"1699.91484"	"1699.91545"	"-0.36"	"-0.00030"	"17/94"	"17"	"94"	"1019239.48773193"	"HCD"	"MS2"	"4.009147"	"83.0"	"100.000"	"75.6579"	"25765"	"25765"	"25745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.5"	""	"119.9"	""	"106.7"	""	"137.1"	""	"146.3"	"146.2"	""	"958"	"58"	"36.000"	"29.000"	"6.82866037335448E-05"	"22"	"0"	"1.167E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"567.30988"	"1699.91507"	"1699.91545"	"-0.22"	"-0.00013"	"9/94"	"9"	"94"	"1934540.96643066"	"HCD"	"MS2"	"4.076112"	"63.3"	"100.000"	"75.3410"	"25605"	"25605"	"25585"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.6"	""	"78.1"	""	"93.9"	""	"99.9"	"1.2"	"113.3"	"112.4"	""	"964"	"42"	"36.000"	"29.000"	"0.00333462527982927"	"21"	"0"	"3.106E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9138"	"0.0000"	"1"	"1"	"1"	"850.46130"	"1699.91533"	"1699.91545"	"-0.07"	"-0.00006"	"14/94"	"14"	"94"	"250139.483703613"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"75.3604"	"25644"	"25644"	"25623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.3"	""	"36.9"	""	"29.7"	""	"38.9"	""	"41.6"	"42.4"	""	"948"	"58"	"36.000"	"29.000"	"7.3583144272013E-05"	"21"	"0"	"3.976E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"850.46167"	"1699.91606"	"1699.91545"	"0.36"	"0.00031"	"9/94"	"9"	"94"	"858369.047058105"	"HCD"	"MS2"	"0"	"76.7"	"100.000"	"75.5250"	"25680"	"25680"	"25661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.1"	""	"95.9"	""	"106.7"	""	"121.7"	""	"134.7"	"151.6"	""	"949"	"31"	"36.000"	"29.000"	"0.0353375321618392"	"16"	"0"	"4.197E-05"	"0.731"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"850.46185"	"1699.91643"	"1699.91545"	"0.57"	"0.00049"	"13/94"	"13"	"94"	"244152.193359375"	"HCD"	"MS2"	"0"	"22.9"	"100.000"	"75.2048"	"25550"	"25550"	"25521"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.4"	""	"26.9"	""	"34.8"	""	"36.9"	""	"40.2"	"41.8"	""	"947"	"48"	"36.000"	"29.000"	"0.000695536592464371"	"19"	"0"	"5.183E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDDSVIQLLNPNR"	"[K].sDDSVIQLLNPNR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYP5"	"Cell adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Cadm1 PE=1 SV=1"	"Q6AYP5"	"Cell adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Cadm1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"850.46222"	"1699.91716"	"1699.91763"	"-0.27"	"-0.00023"	"4/114"	"4"	"114"	"109986.212890625"	"HCD"	"MS2"	"21.65636"	"7.8"	"100.000"	"109.1655"	"39185"	"39185"	"39179"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.7"	""	"9.1"	""	"9.7"	""	"11.9"	""	"17.1"	"17.3"	""	"946"	"11"	"36.000"	"29.000"	"3.67164886165371"	"14"	"0.003786"	"0.04049"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSTDVSVDEVK"	"[R].ySTDVSVDEVk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"567.31067"	"1699.91745"	"1699.91545"	"1.18"	"0.00067"	"11/94"	"11"	"94"	"1162356.65722656"	"HCD"	"MS2"	"37.72375"	"45.7"	"100.000"	"75.3857"	"25654"	"25654"	"25635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.5"	""	"52.4"	""	"60.4"	""	"73.5"	"1.3"	"98.0"	"82.8"	""	"945"	"19"	"36.000"	"29.000"	"0.649234833193413"	"19"	"0.0001686"	"0.001876"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.1905"	"0.0000"	"1"	"1"	"1"	"567.31683"	"1699.93595"	"1699.93792"	"-1.16"	"-0.00066"	"11/108"	"11"	"108"	"4958708.30169678"	"HCD"	"MS2"	"9.318309"	"143.4"	"100.000"	"32.6535"	"8321"	"8321"	"8299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"232.0"	""	"160.8"	""	"175.3"	""	"252.4"	""	"261.8"	"277.4"	""	"935"	"42"	"36.000"	"29.000"	"0.00275919004980337"	"19"	"0"	"4.599E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.3125"	"0.0000"	"1"	"1"	"1"	"567.31714"	"1699.93686"	"1699.93792"	"-0.62"	"-0.00035"	"11/108"	"11"	"108"	"4091264.23919678"	"HCD"	"MS2"	"11.3863"	"130.2"	"100.000"	"32.7777"	"8334"	"8334"	"8313"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"199.4"	""	"158.5"	""	"151.2"	""	"230.3"	""	"241.0"	"256.7"	""	"942"	"48"	"36.000"	"29.000"	"0.000809134850351224"	"20"	"0"	"1.4E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.2615"	"0.0000"	"1"	"1"	"1"	"567.31726"	"1699.93723"	"1699.93792"	"-0.41"	"-0.00023"	"13/108"	"13"	"108"	"5673493.32861328"	"HCD"	"MS2"	"14.50295"	"140.8"	"100.000"	"32.4743"	"8213"	"8213"	"8192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"260.4"	""	"168.5"	""	"175.2"	""	"232.4"	""	"247.3"	"250.1"	""	"941"	"65"	"36.000"	"29.000"	"1.3949531687712E-05"	"21"	"0"	"9.574E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQTVLENTNGK"	"[K].hQTVLENTnGk.[N]"	"N-Term(TMT6plex); N9(Deamidated); K11(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.2833"	"0.0000"	"1"	"1"	"1"	"567.31738"	"1699.93760"	"1699.93792"	"-0.19"	"-0.00011"	"13/108"	"13"	"108"	"4117301.04296875"	"HCD"	"MS2"	"18.2804"	"115.9"	"100.000"	"32.3344"	"8193"	"8193"	"8174"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.8"	""	"137.7"	""	"148.5"	""	"198.5"	"0.5"	"205.1"	"203.9"	""	"941"	"60"	"36.000"	"29.000"	"5.27909682749074E-05"	"22"	"0"	"4.685E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9342"	"0.0000"	"1"	"1"	"1"	"567.32227"	"1699.95224"	"1699.95401"	"-1.04"	"-0.00059"	"15/138"	"15"	"138"	"515175.504760742"	"HCD"	"MS2"	"16.68118"	"10.1"	"100.000"	"87.6675"	"30583"	"30583"	"30559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.0"	""	"11.9"	""	"11.8"	""	"15.5"	""	"20.3"	"21.7"	""	"912"	"76"	"36.000"	"29.000"	"1.14015748493357E-06"	"22"	"0"	"3.029E-07"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.47998"	"1699.95268"	"1699.95401"	"-0.78"	"-0.00066"	"14/138"	"14"	"138"	"141866.826904297"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"87.8093"	"30676"	"30676"	"30650"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"9.9"	""	"9.7"	""	"12.9"	""	"20.9"	"18.2"	""	"911"	"51"	"36.000"	"29.000"	"0.000401317761655151"	"16"	"0"	"3.611E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.9206"	"0.0000"	"1"	"1"	"1"	"567.32263"	"1699.95334"	"1699.95401"	"-0.40"	"-0.00022"	"14/138"	"14"	"138"	"633879.821594238"	"HCD"	"MS2"	"21.06396"	"9.8"	"100.000"	"87.6227"	"30600"	"30600"	"30577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"12.7"	""	"14.4"	""	"12.8"	""	"19.2"	"22.8"	""	"905"	"63"	"36.000"	"29.000"	"2.33678407095612E-05"	"21"	"0"	"1.117E-06"	"1.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.48108"	"1699.95488"	"1699.95401"	"0.51"	"0.00043"	"7/138"	"7"	"138"	"170022.307800293"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"87.9049"	"30678"	"30678"	"30663"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"12.9"	""	"12.8"	""	"16.7"	""	"16.5"	"23.2"	""	"901"	"34"	"36.000"	"29.000"	"0.0160951413587444"	"15"	"0"	"0.0001002"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.48199"	"1699.95671"	"1699.95401"	"1.59"	"0.00135"	"5/138"	"5"	"138"	"137171.7109375"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"87.5050"	"30553"	"30553"	"30530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.1"	""	"12.1"	""	"7.7"	""	"17.3"	""	"16.3"	"16.0"	""	"906"	"16"	"36.000"	"29.000"	"1.17787228211387"	"14"	"0.003818"	"0.04202"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQGLTVEQAEAVAR"	"[K].vQGLTVEQAEAVAR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"850.48224"	"1699.95720"	"1699.95401"	"1.87"	"0.00159"	"11/138"	"11"	"138"	"139131.051025391"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"87.6051"	"30558"	"30558"	"30533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"9.5"	""	"7.9"	""	"14.3"	""	"16.8"	"16.7"	""	"905"	"32"	"36.000"	"29.000"	"0.0270158467179186"	"15"	"0.0001686"	"0.001811"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"850.99469"	"1700.98210"	"1700.98347"	"-0.80"	"-0.00068"	"8/102"	"8"	"102"	"123099.004882813"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"89.1627"	"31224"	"31224"	"31201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"8.7"	""	"8.4"	""	"17.7"	""	"19.3"	"19.9"	""	"819"	"8"	"36.000"	"29.000"	"6.4306356837459"	"14"	"0.004213"	"0.04763"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"567.66571"	"1700.98258"	"1700.98347"	"-0.53"	"-0.00030"	"10/102"	"10"	"102"	"381253.069641113"	"HCD"	"MS2"	"4.673309"	"14.2"	"100.000"	"89.2205"	"31247"	"31247"	"31228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.5"	""	"15.1"	""	"16.3"	""	"28.6"	""	"28.1"	"31.7"	""	"814"	"32"	"36.000"	"29.000"	"0.0249801136102071"	"22"	"0.001049"	"0.008695"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTPEEQLADK"	"[K].vLTPEEQLADk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"A0JPM9"	"Eukaryotic translation initiation factor 3 subunit J OS=Rattus norvegicus OX=10116 GN=Eif3j PE=1 SV=1"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"567.66644"	"1700.98478"	"1700.98347"	"0.77"	"0.00043"	"10/102"	"10"	"102"	"340205.391540527"	"HCD"	"MS2"	"18.38095"	"14.7"	"100.000"	"89.3670"	"31266"	"31266"	"31251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"12.8"	""	"15.5"	""	"33.6"	""	"29.8"	"30.1"	""	"793"	"35"	"35.000"	"28.000"	"0.0123379552766254"	"23"	"0.0008247"	"0.007609"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"567.96313"	"1701.87485"	"1701.87576"	"-0.54"	"-0.00030"	"9/136"	"9"	"136"	"4852519.09185791"	"HCD"	"MS2"	"3.93502"	"37.4"	"100.000"	"59.5320"	"19191"	"19191"	"19173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.0"	""	"37.7"	""	"52.0"	""	"49.7"	""	"71.0"	"92.4"	""	"871"	"59"	"36.000"	"29.000"	"5.4826201683636E-05"	"17"	"0"	"1.435E-06"	"1.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96320"	"1701.87503"	"1701.87576"	"-0.43"	"-0.00024"	"8/136"	"8"	"136"	"2666131.4430542"	"HCD"	"MS2"	"4.282712"	"29.7"	"100.000"	"59.2169"	"19063"	"19063"	"19038"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"36.2"	""	"43.5"	""	"58.5"	""	"57.4"	"45.6"	""	"873"	"49"	"36.000"	"29.000"	"0.000492021689620611"	"16"	"0"	"8.503E-06"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"567.96320"	"1701.87503"	"1701.87576"	"-0.43"	"-0.00024"	"8/136"	"8"	"136"	"5040364.69158936"	"HCD"	"MS2"	"2.540034"	"36.2"	"100.000"	"59.3109"	"19136"	"19136"	"19118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.0"	""	"40.5"	""	"52.7"	""	"49.5"	""	"64.0"	"82.7"	""	"873"	"47"	"36.000"	"29.000"	"0.000918299288958066"	"16"	"0"	"1.139E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96326"	"1701.87522"	"1701.87576"	"-0.32"	"-0.00018"	"9/136"	"9"	"136"	"662582.817382813"	"HCD"	"MS2"	"33.25172"	"30.7"	"100.000"	"59.8842"	"19335"	"19335"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"37.0"	""	"39.4"	""	"53.0"	""	"54.8"	"65.6"	""	"872"	"24"	"36.000"	"29.000"	"0.168068563942276"	"14"	"0"	"0.0003049"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHQISSGDFPSLR"	"[R].eHQISSGDFPSLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"567.96362"	"1701.87632"	"1701.87576"	"0.32"	"0.00018"	"6/136"	"6"	"136"	"2227750.76379395"	"HCD"	"MS2"	"6.125596"	"27.2"	"100.000"	"58.9981"	"19009"	"19009"	"18984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.0"	""	"32.8"	""	"35.9"	""	"51.2"	""	"48.2"	"55.6"	""	"870"	"43"	"36.000"	"29.000"	"0.00234147355394586"	"15"	"0"	"2.646E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEFGESDLR"	"[K].kYEFGESDLR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"567.97827"	"1701.92026"	"1701.92121"	"-0.56"	"-0.00032"	"7/100"	"7"	"100"	"2297141.68426514"	"HCD"	"MS2"	"2.519099"	"113.0"	"100.000"	"60.3106"	"19541"	"19541"	"19525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.4"	""	"174.7"	""	"173.1"	""	"151.1"	""	"211.7"	"192.1"	""	"1052"	"14"	"37.000"	"30.000"	"1.94978059657635"	"18"	"0"	"0.0003117"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEFGESDLR"	"[K].kYEFGESDLR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"3"	"3"	"0.6111"	"0.0000"	"1"	"1"	"1"	"567.97839"	"1701.92063"	"1701.92121"	"-0.34"	"-0.00019"	"7/100"	"7"	"100"	"1961441.8927002"	"HCD"	"MS2"	"18.44267"	"97.9"	"100.000"	"60.3774"	"19535"	"19535"	"19512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.7"	""	"146.7"	""	"150.3"	""	"148.5"	""	"172.5"	"168.0"	""	"1046"	"18"	"37.000"	"30.000"	"0.778935843642809"	"20"	"0.0001686"	"0.001804"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEFGESDLR"	"[K].kYEFGESDLR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"3"	"3"	"0.3333"	"0.0000"	"1"	"1"	"1"	"567.97864"	"1701.92136"	"1701.92121"	"0.09"	"0.00005"	"6/100"	"6"	"100"	"1599559.34655762"	"HCD"	"MS2"	"8.5627"	"87.0"	"100.000"	"60.7804"	"19699"	"19699"	"19679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"124.5"	""	"124.0"	""	"138.7"	""	"133.5"	"0.7"	"154.1"	"147.9"	""	"1041"	"6"	"37.000"	"30.000"	"13.8172219500827"	"17"	"0.00455"	"0.05302"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYEFGESDLR"	"[K].kYEFGESDLR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"1"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"567.97870"	"1701.92154"	"1701.92121"	"0.20"	"0.00011"	"7/100"	"7"	"100"	"3303685.31317139"	"HCD"	"MS2"	"6.654404"	"147.7"	"100.000"	"60.6075"	"19661"	"19661"	"19644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"218.7"	""	"225.3"	""	"214.7"	""	"214.6"	""	"258.9"	"269.3"	""	"1041"	"18"	"37.000"	"30.000"	"0.795098133312917"	"19"	"0.0005778"	"0.007049"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQLDSPATPEK"	"[K].QLFQLDSPATPEk.[I]"	"K13(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"851.96442"	"1702.92156"	"1702.92132"	"0.14"	"0.00012"	"6/132"	"6"	"132"	"225903.615600586"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"113.0895"	"40770"	"40770"	"40751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"7.2"	""	"10.9"	""	"9.1"	""	"12.3"	"18.6"	""	"1073"	"37"	"37.000"	"30.000"	"0.0100825347221495"	"17"	"0.001615"	"0.01325"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLFQLDSPATPEK"	"[K].QLFQLDSPATPEk.[I]"	"K13(TMT6plex)"	"1"	"1"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"P22985"	"Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"851.96460"	"1702.92192"	"1702.92132"	"0.36"	"0.00030"	"5/132"	"5"	"132"	"100542.830871582"	"HCD"	"MS2"	"0"	"3.6"	"100.000"	"113.0904"	"40757"	"40757"	"40729"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.1"	""	"5.6"	""	"5.2"	""	"7.8"	""	"5.8"	"5.5"	""	"1073"	"19"	"37.000"	"30.000"	"0.712147126572005"	"14"	"0.008893"	"0.1151"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTEQVFNEAPGIR"	"[K].lTEQVFNEAPGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"568.31567"	"1702.93247"	"1702.93255"	"-0.05"	"-0.00003"	"14/126"	"14"	"126"	"518619.657104492"	"HCD"	"MS2"	"40.12957"	"6.9"	"100.000"	"101.2535"	"36099"	"36099"	"36082"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.3"	""	"7.5"	""	"12.9"	""	"12.7"	""	"10.9"	"14.2"	""	"1080"	"43"	"37.000"	"30.000"	"0.00259653248162853"	"24"	"0"	"5.542E-06"	"0.912"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTEQVFNEAPGIR"	"[K].lTEQVFNEAPGIR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"P25409"	"Alanine aminotransferase 1 OS=Rattus norvegicus OX=10116 GN=Gpt PE=1 SV=2"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"568.31592"	"1702.93320"	"1702.93255"	"0.38"	"0.00022"	"13/126"	"13"	"126"	"610797.39074707"	"HCD"	"MS2"	"6.352424"	"7.7"	"100.000"	"101.1386"	"36026"	"36026"	"36011"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"9.6"	""	"12.3"	""	"11.0"	""	"14.6"	"14.5"	""	"1081"	"43"	"37.000"	"30.000"	"0.00242546883258858"	"23"	"0"	"4.939E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"568.66962"	"1703.99430"	"1703.99437"	"-0.04"	"-0.00002"	"10/98"	"10"	"98"	"607719.229614258"	"HCD"	"MS2"	"18.61872"	"30.2"	"100.000"	"82.6437"	"28591"	"28591"	"28569"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.9"	""	"34.5"	""	"42.6"	""	"54.8"	""	"49.5"	"50.1"	""	"899"	"15"	"36.000"	"29.000"	"1.33884313502842"	"16"	"0.009239"	"0.1187"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSADDKTNIK"	"[M].vLSADDkTNIk.[N]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"1"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"568.67010"	"1703.99576"	"1703.99437"	"0.82"	"0.00046"	"5/98"	"5"	"98"	"1957678.65350342"	"HCD"	"MS2"	"7.294281"	"87.3"	"100.000"	"82.4310"	"28477"	"28477"	"28463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"136.0"	""	"110.3"	""	"118.8"	""	"164.7"	""	"143.4"	"153.0"	""	"896"	"10"	"36.000"	"29.000"	"4.05768205202394"	"19"	"0.009444"	"0.1255"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAFSPADHDDFVI"	"[R].aAAFSPADHDDFVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.92462"	"1704.84197"	"1704.84307"	"-0.65"	"-0.00055"	"4/118"	"4"	"118"	"85098.3059082031"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"110.5077"	"39713"	"39713"	"39687"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.5"	""	"7.1"	""	"5.4"	""	"3.9"	""	"7.0"	"3.9"	""	"702"	"14"	"35.000"	"28.000"	"1.49041466945156"	"13"	"0.004392"	"0.05186"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAFSPADHDDFVI"	"[R].aAAFSPADHDDFVI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"Q9JJS5"	"SH3 domain-binding protein 4 OS=Rattus norvegicus OX=10116 GN=Sh3bp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"852.92682"	"1704.84636"	"1704.84307"	"1.93"	"0.00165"	"7/118"	"7"	"118"	"199444.862548828"	"HCD"	"MS2"	"29.31142"	"7.4"	"100.000"	"110.5773"	"39755"	"39755"	"39724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.4"	""	"9.4"	""	"10.2"	""	"14.6"	""	"15.6"	"11.2"	""	"748"	"23"	"35.000"	"28.000"	"0.205528286822752"	"14"	"0.0009352"	"0.007901"	"0.263"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSLYPEMSAHER"	"[K].vGSLYPEMSAHER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"568.95715"	"1704.85691"	"1704.85767"	"-0.45"	"-0.00025"	"14/114"	"14"	"114"	"763827.680358887"	"HCD"	"MS2"	"0"	"18.2"	"100.000"	"60.2437"	"19514"	"19514"	"19493"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.5"	""	"28.2"	""	"26.2"	""	"29.2"	""	"33.8"	"37.4"	""	"852"	"36"	"36.000"	"29.000"	"0.0117060290922162"	"18"	"0"	"0.0001244"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGSLYPEMSAHER"	"[K].vGSLYPEMSAHER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"P28023"	"Dynactin subunit 1 OS=Rattus norvegicus OX=10116 GN=Dctn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"568.95764"	"1704.85837"	"1704.85767"	"0.41"	"0.00023"	"14/114"	"14"	"114"	"1085499.13061523"	"HCD"	"MS2"	"20.51044"	"25.8"	"100.000"	"60.3474"	"19523"	"19523"	"19496"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"35.1"	""	"32.9"	""	"41.7"	"0.4"	"52.7"	"47.4"	""	"863"	"36"	"36.000"	"29.000"	"0.0109642972244452"	"17"	"0"	"2.837E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEMEALVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8406"	"0.0000"	"1"	"1"	"1"	"852.98340"	"1704.95952"	"1704.96063"	"-0.65"	"-0.00055"	"10/102"	"10"	"102"	"854610.057800293"	"HCD"	"MS2"	"0"	"69.6"	"100.000"	"111.3143"	"40041"	"40041"	"40023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.7"	""	"82.4"	""	"98.5"	""	"112.4"	""	"132.4"	"137.2"	""	"1093"	"69"	"37.000"	"30.000"	"7.02409159659187E-06"	"27"	"0"	"4.12E-07"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEMEALVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6765"	"0.0000"	"1"	"1"	"1"	"852.98370"	"1704.96013"	"1704.96063"	"-0.29"	"-0.00025"	"10/102"	"10"	"102"	"731627.065124512"	"HCD"	"MS2"	"0"	"61.6"	"100.000"	"111.3883"	"40085"	"40085"	"40060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.7"	""	"86.5"	""	"80.4"	""	"82.5"	""	"121.3"	"122.4"	""	"1098"	"68"	"37.000"	"30.000"	"7.88083698911156E-06"	""	"0"	"1.473E-07"	"1.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEMEALVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7907"	"0.0000"	"1"	"1"	"1"	"568.99164"	"1704.96036"	"1704.96063"	"-0.16"	"-0.00009"	"6/102"	"6"	"102"	"2037371.96099854"	"HCD"	"MS2"	"25.42434"	"52.6"	"100.000"	"111.3906"	"40086"	"40086"	"40060"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.6"	""	"69.2"	""	"69.2"	""	"87.0"	""	"93.7"	"98.0"	""	"1105"	"43"	"37.000"	"30.000"	"0.00251960396063091"	"24"	"0"	"1.787E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEMEALVk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.7255"	"0.0000"	"1"	"1"	"1"	"568.99188"	"1704.96109"	"1704.96063"	"0.27"	"0.00016"	"7/102"	"7"	"102"	"2678775.52496338"	"HCD"	"MS2"	"33.81843"	"67.9"	"100.000"	"111.3004"	"40036"	"40036"	"40007"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.3"	""	"99.0"	""	"98.5"	""	"88.8"	""	"125.9"	"136.0"	""	"1095"	"51"	"37.000"	"30.000"	"0.000410567079609519"	"29"	"0"	"4.209E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"853.41766"	"1705.82805"	"1705.83045"	"-1.41"	"-0.00120"	"10/106"	"10"	"106"	"592239.779968262"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"94.0068"	"33136"	"33136"	"33115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.0"	""	"24.3"	""	"26.0"	""	"69.1"	""	"59.1"	"63.1"	""	"588"	"48"	"34.000"	"27.000"	"0.000462750962153068"	"17"	"0.0001686"	"0.001724"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.28094"	"1705.82828"	"1705.83045"	"-1.27"	"-0.00072"	"12/106"	"12"	"106"	"384702.645446777"	"HCD"	"MS2"	"29.3931"	"11.7"	"100.000"	"94.0228"	"33143"	"33143"	"33115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.0"	""	"15.1"	""	"16.9"	""	"20.4"	""	"20.5"	"24.5"	""	"587"	"31"	"34.000"	"27.000"	"0.0249809014212398"	"14"	"0.0001686"	"0.001175"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"853.41797"	"1705.82866"	"1705.83045"	"-1.05"	"-0.00090"	"7/106"	"7"	"106"	"137001.781616211"	"HCD"	"MS2"	"100"	"8.5"	"100.000"	"93.3996"	"32890"	"32890"	"32866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.1"	""	"8.1"	""	"13.5"	""	"22.1"	""	"16.6"	"15.5"	""	"592"	"2"	"34.000"	"27.000"	"20.1044275254687"	"14"	"0.002588"	"0.02717"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"853.41815"	"1705.82903"	"1705.83045"	"-0.84"	"-0.00071"	"15/106"	"15"	"106"	"376288.054077148"	"HCD"	"MS2"	"8.580539"	"19.5"	"100.000"	"94.2027"	"33251"	"33251"	"33232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"15.4"	""	"21.6"	""	"46.6"	""	"41.4"	"41.4"	""	"596"	"29"	"34.000"	"27.000"	"0.0393746098987599"	"16"	"0.0005161"	"0.006949"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"853.41821"	"1705.82915"	"1705.83045"	"-0.76"	"-0.00065"	"13/106"	"13"	"106"	"228687.921142578"	"HCD"	"MS2"	"8.041088"	"13.8"	"100.000"	"94.3068"	"33258"	"33258"	"33243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"13.4"	""	"12.6"	""	"35.1"	""	"28.9"	"27.5"	""	"596"	"31"	"34.000"	"27.000"	"0.0220402371967355"	"21"	"0.0009352"	"0.008185"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.28131"	"1705.82938"	"1705.83045"	"-0.63"	"-0.00036"	"10/106"	"10"	"106"	"439482.199829102"	"HCD"	"MS2"	"21.09685"	"11.0"	"100.000"	"93.9902"	"33165"	"33165"	"33142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"13.6"	""	"20.2"	""	"14.1"	""	"22.0"	"19.8"	""	"597"	"23"	"34.000"	"27.000"	"0.153795750407654"	"14"	"0.001718"	"0.01504"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8478"	"0.0000"	"1"	"1"	"1"	"853.41840"	"1705.82952"	"1705.83045"	"-0.55"	"-0.00047"	"9/106"	"9"	"106"	"457425.250183105"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"93.9117"	"33133"	"33133"	"33110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"19.1"	""	"24.3"	""	"66.3"	"0.7"	"45.4"	"51.0"	""	"597"	"46"	"34.000"	"27.000"	"0.000742923909507294"	"22"	"0.0001991"	"0.001984"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9535"	"0.0000"	"1"	"1"	"1"	"853.41876"	"1705.83025"	"1705.83045"	"-0.12"	"-0.00010"	"11/106"	"11"	"106"	"638100.030090332"	"HCD"	"MS2"	"0"	"27.7"	"100.000"	"93.6161"	"33013"	"33013"	"32995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.9"	""	"29.3"	""	"26.4"	""	"73.9"	"0.1"	"51.0"	"58.6"	""	"603"	"43"	"34.000"	"27.000"	"0.00154984160952101"	"17"	"0.0001686"	"0.001314"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.28162"	"1705.83030"	"1705.83045"	"-0.09"	"-0.00005"	"13/106"	"13"	"106"	"405864.005187988"	"HCD"	"MS2"	"33.01416"	"14.1"	"100.000"	"93.4267"	"32937"	"32937"	"32915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"18.0"	""	"31.6"	""	"23.3"	""	"20.5"	"23.8"	""	"602"	"30"	"34.000"	"27.000"	"0.0269504794430427"	"14"	"9.9E-05"	"0.0009375"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"853.41913"	"1705.83098"	"1705.83045"	"0.31"	"0.00026"	"11/106"	"11"	"106"	"721193.822937012"	"HCD"	"MS2"	"0"	"35.0"	"100.000"	"93.6997"	"33011"	"33011"	"32993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.2"	""	"27.0"	""	"31.4"	""	"91.1"	""	"73.7"	"70.8"	""	"602"	"52"	"34.000"	"27.000"	"0.000178060051886817"	"18"	"0.0001686"	"0.001656"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.28217"	"1705.83194"	"1705.83045"	"0.87"	"0.00050"	"11/106"	"11"	"106"	"447085.882202148"	"HCD"	"MS2"	"22.17255"	"11.0"	"100.000"	"93.5635"	"32956"	"32956"	"32935"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"9.9"	""	"22.2"	""	"20.1"	""	"17.4"	"25.2"	""	"603"	"27"	"34.000"	"27.000"	"0.0594685454938628"	"14"	"0.0001991"	"0.002805"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYSPYDMLESIR"	"[K].sYSPYDmLESIR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.42010"	"1705.83293"	"1705.83045"	"1.45"	"0.00124"	"7/106"	"7"	"106"	"215446.395568848"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"93.3297"	"32898"	"32898"	"32875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"10.6"	""	"14.0"	""	"27.9"	""	"29.3"	"26.6"	""	"606"	"20"	"34.000"	"27.000"	"0.271920924733727"	"14"	"0.00296"	"0.03154"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPLEYSYGEYR"	"[K].sLPLEYSYGEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.43402"	"1705.86077"	"1705.86347"	"-1.58"	"-0.00135"	"4/106"	"4"	"106"	"207651.920776367"	"HCD"	"MS2"	"31.62075"	"13.6"	"100.000"	"98.8732"	"35107"	"35107"	"35090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"22.1"	""	"14.1"	""	"27.2"	""	"21.3"	"24.1"	""	"805"	"12"	"36.000"	"29.000"	"2.26864156469947"	"13"	"0.003529"	"0.03852"	"0.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPLEYSYGEYR"	"[K].sLPLEYSYGEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.43555"	"1705.86382"	"1705.86347"	"0.20"	"0.00017"	"8/106"	"8"	"106"	"404783.57244873"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"99.1687"	"35227"	"35227"	"35210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.2"	""	"27.3"	""	"27.4"	""	"26.8"	""	"30.9"	"32.2"	""	"828"	"37"	"36.000"	"29.000"	"0.00914113959469824"	"15"	"9.9E-05"	"0.000642"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPLEYSYGEYR"	"[K].sLPLEYSYGEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.43561"	"1705.86394"	"1705.86347"	"0.28"	"0.00024"	"12/106"	"12"	"106"	"416243.307067871"	"HCD"	"MS2"	"0"	"20.4"	"100.000"	"99.1996"	"35268"	"35268"	"35255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.8"	""	"31.0"	""	"28.4"	""	"31.4"	""	"40.6"	"34.9"	""	"837"	"18"	"36.000"	"29.000"	"0.712353335763286"	"14"	"0.001261"	"0.01027"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPLEYSYGEYR"	"[K].sLPLEYSYGEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.29333"	"1705.86545"	"1705.86347"	"1.16"	"0.00066"	"11/106"	"11"	"106"	"560707.099182129"	"HCD"	"MS2"	"21.88207"	"13.0"	"100.000"	"99.0192"	"35196"	"35196"	"35170"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"16.3"	""	"17.2"	""	"22.3"	""	"25.5"	"27.7"	""	"854"	"38"	"36.000"	"29.000"	"0.00637423212890232"	"15"	"0"	"0.00033"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPLEYSYGEYR"	"[K].sLPLEYSYGEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"569.29333"	"1705.86545"	"1705.86347"	"1.16"	"0.00066"	"10/106"	"10"	"106"	"626785.615844727"	"HCD"	"MS2"	"3.320786"	"14.2"	"100.000"	"99.0162"	"35165"	"35165"	"35145"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"14.3"	""	"18.8"	""	"27.0"	""	"28.5"	"28.8"	""	"854"	"32"	"36.000"	"29.000"	"0.025317911359566"	"17"	"0"	"0.0002175"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLPLEYSYGEYR"	"[K].sLPLEYSYGEYR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"P55314"	"Complement component C8 beta chain OS=Rattus norvegicus OX=10116 GN=C8b PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.43640"	"1705.86553"	"1705.86347"	"1.21"	"0.00103"	"4/106"	"4"	"106"	"201714.526245117"	"HCD"	"MS2"	"17.99443"	"11.3"	"100.000"	"98.9152"	"35154"	"35154"	"35136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"17.5"	""	"13.9"	""	"17.3"	""	"18.7"	"23.2"	""	"854"	"15"	"36.000"	"29.000"	"1.23716571194846"	"13"	"0.002588"	"0.02727"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLLEGPPESMGR"	"[R].fQLLEGPPESmGR.[G]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.43768"	"1705.86809"	"1705.87807"	"-5.85"	"-0.00499"	"7/128"	"7"	"128"	"140709.59375"	"HCD"	"MS2"	"23.02765"	"8.5"	"100.000"	"99.5225"	"35399"	"35399"	"35369"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"11.9"	""	"10.3"	""	"16.2"	""	"14.9"	"12.9"	""	"862"	"21"	"36.000"	"29.000"	"0.343144680029864"	"14"	"0.0001991"	"0.002586"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLLEGPPESMGR"	"[R].fQLLEGPPESmGR.[G]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.44116"	"1705.87505"	"1705.87807"	"-1.77"	"-0.00151"	"4/128"	"4"	"128"	"114752.612731934"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"99.8373"	"35498"	"35498"	"35476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.8"	""	"10.4"	""	"7.5"	""	"15.3"	""	"9.7"	"14.4"	""	"896"	"12"	"36.000"	"29.000"	"3.11370894279781"	"13"	"0.001348"	"0.01108"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLLEGPPESMGR"	"[R].fQLLEGPPESmGR.[G]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"569.29724"	"1705.87717"	"1705.87807"	"-0.53"	"-0.00030"	"12/128"	"12"	"128"	"808524.845703125"	"HCD"	"MS2"	"2.925944"	"13.0"	"100.000"	"99.7177"	"35449"	"35449"	"35429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"20.9"	""	"17.6"	""	"24.8"	""	"20.2"	"23.2"	""	"888"	"54"	"36.000"	"29.000"	"0.000176759583725753"	"20"	"0"	"2.134E-06"	"0.998"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLLEGPPESMGR"	"[R].fQLLEGPPESmGR.[G]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.44226"	"1705.87724"	"1705.87807"	"-0.49"	"-0.00041"	"11/128"	"11"	"128"	"156731.996765137"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"99.8478"	"35530"	"35530"	"35511"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"10.2"	""	"12.5"	""	"17.5"	""	"14.9"	"10.4"	""	"888"	"22"	"36.000"	"29.000"	"0.278857911313113"	"14"	"0.0001686"	"0.001142"	"0.436"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLLEGPPESMGR"	"[R].fQLLEGPPESmGR.[G]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"3"	"3"	"0.6098"	"0.0000"	"1"	"1"	"1"	"569.29749"	"1705.87790"	"1705.87807"	"-0.10"	"-0.00006"	"10/128"	"10"	"128"	"829680.536865234"	"HCD"	"MS2"	"6.755673"	"13.5"	"100.000"	"99.7812"	"35503"	"35503"	"35482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.8"	""	"17.2"	""	"24.4"	""	"23.7"	""	"21.6"	"22.9"	""	"904"	"41"	"36.000"	"29.000"	"0.00332765608067621"	""	"0"	"5.702E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQLLEGPPESMGR"	"[R].fQLLEGPPESmGR.[G]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.44312"	"1705.87895"	"1705.87807"	"0.52"	"0.00044"	"11/128"	"11"	"128"	"195223.793457031"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"99.5121"	"35366"	"35366"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"11.5"	""	"13.8"	""	"22.3"	""	"19.2"	"19.8"	""	"893"	"16"	"36.000"	"29.000"	"1.02996261976351"	"14"	"0.0001991"	"0.003779"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.44989"	"1705.89250"	"1705.89583"	"-1.95"	"-0.00166"	"13/128"	"13"	"128"	"244248.907775879"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"80.7066"	"27809"	"27809"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"20.2"	""	"15.9"	""	"16.3"	""	"25.1"	"24.8"	""	"993"	"37"	"36.000"	"29.000"	"0.00968097843779869"	"15"	"9.9E-05"	"0.000495"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"569.30322"	"1705.89511"	"1705.89583"	"-0.42"	"-0.00024"	"13/128"	"13"	"128"	"2575939.38964844"	"HCD"	"MS2"	"20.26443"	"40.2"	"100.000"	"80.9422"	"27904"	"27904"	"27886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"59.4"	""	"57.5"	""	"57.9"	""	"76.9"	"72.1"	""	"992"	"43"	"36.000"	"29.000"	"0.00229340986614033"	"18"	"0"	"0.0002074"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"569.30341"	"1705.89566"	"1705.89583"	"-0.10"	"-0.00006"	"14/128"	"14"	"128"	"1091976.61248779"	"HCD"	"MS2"	"10.69154"	"19.6"	"100.000"	"81.1775"	"27972"	"27972"	"27952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"27.9"	""	"23.4"	""	"29.4"	""	"34.2"	"41.9"	""	"987"	"53"	"36.000"	"29.000"	"0.000273078278897966"	"18"	"0"	"0.000368"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"569.30341"	"1705.89566"	"1705.89583"	"-0.10"	"-0.00006"	"12/128"	"12"	"128"	"2600808.48852539"	"HCD"	"MS2"	"21.4247"	"45.3"	"100.000"	"80.8660"	"27846"	"27846"	"27830"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"64.9"	""	"73.1"	""	"63.7"	""	"89.7"	"82.3"	""	"987"	"44"	"36.000"	"29.000"	"0.00182090444894369"	"17"	"0"	"0.0001254"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.6889"	"0.0000"	"1"	"1"	"1"	"853.45148"	"1705.89568"	"1705.89583"	"-0.09"	"-0.00008"	"13/128"	"13"	"128"	"203139.437561035"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"80.6283"	"27750"	"27750"	"27721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"14.0"	""	"12.3"	""	"20.3"	""	"25.2"	"21.2"	""	"987"	"45"	"36.000"	"29.000"	"0.00162662392959575"	""	"0"	"7.601E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"853.45166"	"1705.89604"	"1705.89583"	"0.12"	"0.00011"	"7/128"	"7"	"128"	"237668.634643555"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"81.2489"	"28001"	"28001"	"27982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"14.7"	""	"15.9"	""	"19.3"	""	"22.5"	"25.1"	""	"983"	"37"	"36.000"	"29.000"	"0.00908915526227727"	"21"	"9.9E-05"	"0.0004835"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"569.30359"	"1705.89621"	"1705.89583"	"0.22"	"0.00013"	"13/128"	"13"	"128"	"1039168.828125"	"HCD"	"MS2"	"7.384421"	"21.3"	"100.000"	"81.2511"	"28029"	"28029"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"25.1"	""	"19.5"	""	"34.7"	""	"44.8"	"52.8"	""	"983"	"34"	"36.000"	"29.000"	"0.0185576731839842"	"27"	"9.9E-05"	"0.0009446"	"0.453"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"853.45178"	"1705.89629"	"1705.89583"	"0.27"	"0.00023"	"7/128"	"7"	"128"	"208701.597412109"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"81.3294"	"28061"	"28061"	"28039"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"11.9"	""	"15.7"	""	"19.2"	""	"24.3"	"23.4"	""	"983"	"34"	"36.000"	"29.000"	"0.0214547531546042"	"22"	"0"	"0.0003914"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.7917"	"0.0000"	"1"	"1"	"1"	"853.45190"	"1705.89653"	"1705.89583"	"0.41"	"0.00035"	"20/128"	"20"	"128"	"862837.170410156"	"HCD"	"MS2"	"0"	"36.6"	"100.000"	"80.9376"	"27876"	"27876"	"27859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.6"	""	"41.3"	""	"49.1"	""	"55.9"	"1.6"	"68.2"	"68.9"	""	"989"	"72"	"36.000"	"29.000"	"3.38194309580666E-06"	""	"0"	"2.602E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSVVAFTPDGER"	"[R].tTPSVVAFTPDGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"P48721"	"Stress-70 protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspa9 PE=1 SV=3"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"853.45227"	"1705.89726"	"1705.89583"	"0.84"	"0.00072"	"10/128"	"10"	"128"	"856220.627624512"	"HCD"	"MS2"	"0"	"36.9"	"100.000"	"81.0111"	"27932"	"27932"	"27916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.5"	""	"39.5"	""	"49.4"	""	"61.9"	""	"74.9"	"65.2"	""	"982"	"62"	"36.000"	"29.000"	"3.38907743685559E-05"	"27"	"0"	"2.204E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"569.62909"	"1706.87271"	"1706.87498"	"-1.33"	"-0.00076"	"12/118"	"12"	"118"	"2648876.13220215"	"HCD"	"MS2"	"19.23153"	"92.9"	"100.000"	"53.7780"	"16889"	"16889"	"16864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.2"	""	"124.1"	""	"126.7"	""	"143.0"	""	"157.9"	"153.3"	""	"922"	"46"	"36.000"	"29.000"	"0.0010585245267798"	"25"	"0"	"1.951E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8778"	"0.0000"	"1"	"1"	"1"	"853.94012"	"1706.87297"	"1706.87498"	"-1.18"	"-0.00101"	"11/118"	"11"	"118"	"1750816.58123779"	"HCD"	"MS2"	"0"	"147.2"	"100.000"	"54.0173"	"16986"	"16986"	"16968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"293.6"	""	"188.6"	""	"195.3"	""	"224.6"	"2.0"	"241.7"	"245.4"	""	"923"	"90"	"36.000"	"29.000"	"4.71163571731095E-08"	"29"	"0"	"8.96E-08"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"569.62933"	"1706.87345"	"1706.87498"	"-0.90"	"-0.00051"	"11/118"	"11"	"118"	"1499550.81445313"	"HCD"	"MS2"	"15.59078"	"60.9"	"100.000"	"54.0632"	"16972"	"16972"	"16947"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.1"	""	"84.0"	""	"87.0"	""	"98.2"	"0.8"	"103.7"	"98.3"	""	"944"	"43"	"36.000"	"29.000"	"0.00252896022346297"	"20"	"0"	"0.0001056"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.7551"	"0.0000"	"1"	"1"	"1"	"569.62933"	"1706.87345"	"1706.87498"	"-0.90"	"-0.00051"	"15/118"	"15"	"118"	"6054135.55981445"	"HCD"	"MS2"	"14.98911"	"185.9"	"100.000"	"54.3807"	"17101"	"17101"	"17082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"346.2"	""	"236.0"	""	"256.6"	""	"282.8"	"2.7"	"313.2"	"320.1"	""	"944"	"49"	"36.000"	"29.000"	"0.00061793386765572"	"28"	"0"	"2.257E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"569.62970"	"1706.87455"	"1706.87498"	"-0.26"	"-0.00015"	"12/118"	"12"	"118"	"5366537.45275879"	"HCD"	"MS2"	"22.04823"	"174.9"	"100.000"	"54.0981"	"17019"	"17019"	"16999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"326.7"	""	"239.5"	""	"229.9"	""	"253.8"	""	"297.4"	"310.8"	""	"945"	"43"	"36.000"	"29.000"	"0.00219483467542749"	"19"	"0"	"3.976E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"853.94092"	"1706.87456"	"1706.87498"	"-0.25"	"-0.00021"	"17/118"	"17"	"118"	"429355.103515625"	"HCD"	"MS2"	"9.87189"	"38.5"	"100.000"	"53.7296"	"16869"	"16869"	"16848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.2"	""	"57.4"	""	"51.0"	""	"49.9"	"0.3"	"66.4"	"63.2"	""	"946"	"65"	"36.000"	"29.000"	"1.40559803301209E-05"	"21"	"0"	"2.094E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.8780"	"0.0000"	"1"	"1"	"1"	"853.94098"	"1706.87468"	"1706.87498"	"-0.18"	"-0.00015"	"8/118"	"8"	"118"	"182285.713867188"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"54.6820"	"17224"	"17224"	"17200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.3"	""	"21.8"	""	"20.7"	""	"24.7"	""	"26.6"	"27.9"	""	"946"	"41"	"36.000"	"29.000"	"0.00346626004174701"	"20"	"0"	"5.83E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9107"	"0.0000"	"1"	"1"	"1"	"853.94135"	"1706.87541"	"1706.87498"	"0.25"	"0.00021"	"15/118"	"15"	"118"	"225149.395324707"	"HCD"	"MS2"	"0"	"20.7"	"100.000"	"54.0264"	"16957"	"16957"	"16931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"27.4"	""	"30.1"	""	"33.0"	"1.2"	"31.7"	"35.3"	""	"939"	"56"	"36.000"	"29.000"	"0.000121237115950294"	"21"	"0"	"6.444E-05"	"0.693"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AANDFNPDADAK"	"[R].aANDFNPDADAk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"2"	"2"	"0.9205"	"0.0000"	"1"	"1"	"1"	"853.94135"	"1706.87541"	"1706.87498"	"0.25"	"0.00021"	"11/118"	"11"	"118"	"1766644.85559082"	"HCD"	"MS2"	"0"	"153.9"	"100.000"	"54.3417"	"17085"	"17085"	"17069"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"315.2"	""	"192.5"	""	"218.6"	""	"226.0"	""	"254.7"	"247.8"	""	"939"	"88"	"36.000"	"29.000"	"7.68485356810357E-08"	"25"	"0"	"7.536E-08"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQMTDQVADLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"853.94171"	"1706.87615"	"1706.87669"	"-0.32"	"-0.00027"	"4/124"	"4"	"124"	"109380.604431152"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"104.9093"	"37540"	"37540"	"37524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"6.6"	""	"6.9"	""	"7.6"	""	"8.3"	"12.9"	""	"942"	"8"	"36.000"	"29.000"	"8.11000098818409"	"13"	"0.002834"	"0.03023"	"0.141"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQMTDQVADLR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"569.63074"	"1706.87766"	"1706.87669"	"0.57"	"0.00032"	"11/124"	"11"	"124"	"234236.679504395"	"HCD"	"MS2"	"24.55658"	"8.8"	"100.000"	"104.9185"	"37544"	"37544"	"37524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"10.5"	""	"13.2"	""	"14.4"	""	"17.5"	"17.8"	""	"943"	"39"	"36.000"	"29.000"	"0.00548885422867047"	"18"	"0"	"2.692E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSNRPAFMPSEGR"	"[R].lSNRPAFmPSEGR.[M]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.63202"	"1706.88150"	"1706.88455"	"-1.79"	"-0.00102"	"8/134"	"8"	"134"	"1142058.77532959"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"40.5284"	"11476"	"11476"	"11458"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.4"	""	"50.3"	""	"55.0"	""	"97.1"	"0.4"	"91.9"	"87.1"	""	"950"	"19"	"36.000"	"29.000"	"0.670955333695808"	"14"	"0.0001991"	"0.002607"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSNRPAFMPSEGR"	"[R].lSNRPAFmPSEGR.[M]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.63226"	"1706.88224"	"1706.88455"	"-1.36"	"-0.00077"	"8/134"	"8"	"134"	"1374922.11566162"	"HCD"	"MS2"	"54.15493"	"49.5"	"100.000"	"40.4397"	"11475"	"11475"	"11450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.1"	""	"47.9"	""	"54.8"	""	"105.3"	""	"104.8"	"95.6"	""	"977"	"19"	"36.000"	"29.000"	"0.635132838869262"	"14"	"0.0001991"	"0.002404"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"853.95270"	"1706.89812"	"1706.90014"	"-1.18"	"-0.00101"	"14/104"	"14"	"104"	"620731.539611816"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"50.1391"	"15411"	"15411"	"15387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"69.8"	""	"59.1"	""	"70.4"	""	"81.9"	"77.4"	""	"1100"	"24"	"37.000"	"30.000"	"0.212501837379738"	"22"	"9.9E-05"	"0.0004322"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"569.63770"	"1706.89853"	"1706.90014"	"-0.94"	"-0.00053"	"11/104"	"11"	"104"	"6366843.3614502"	"HCD"	"MS2"	"31.64548"	"213.3"	"100.000"	"50.6741"	"15594"	"15594"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"357.3"	""	"301.6"	""	"298.2"	""	"335.3"	"1.6"	"367.9"	"355.6"	""	"1119"	"28"	"37.000"	"30.000"	"0.0808723551732346"	"17"	"0"	"0.0003166"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8769"	"0.0000"	"1"	"1"	"1"	"853.95306"	"1706.89885"	"1706.90014"	"-0.75"	"-0.00064"	"8/104"	"8"	"104"	"903373.35748291"	"HCD"	"MS2"	"0"	"61.5"	"100.000"	"50.7980"	"15645"	"15645"	"15621"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.5"	""	"77.0"	""	"98.8"	""	"82.9"	""	"97.5"	"105.9"	""	"1110"	"65"	"37.000"	"30.000"	"1.80008487628889E-05"	"24"	"0"	"1.515E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.7879"	"0.0000"	"1"	"1"	"1"	"853.95325"	"1706.89922"	"1706.90014"	"-0.54"	"-0.00046"	"14/104"	"14"	"104"	"557259.641052246"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"50.4944"	"15521"	"15521"	"15494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.7"	""	"52.3"	""	"54.9"	""	"54.0"	"0.1"	"54.0"	"60.0"	""	"1110"	"33"	"37.000"	"30.000"	"0.0282678633436744"	"22"	"0"	"0.0001741"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"569.63794"	"1706.89927"	"1706.90014"	"-0.51"	"-0.00029"	"12/104"	"12"	"104"	"6222968.14245605"	"HCD"	"MS2"	"32.13163"	"212.2"	"100.000"	"50.3069"	"15479"	"15479"	"15463"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"358.3"	""	"281.9"	""	"291.7"	""	"328.2"	""	"393.6"	"355.2"	""	"1107"	"29"	"37.000"	"30.000"	"0.073133713352227"	"16"	"0"	"0.0002516"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYEPQEDPGVK"	"[K].sYEPQEDPGVk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"853.95386"	"1706.90044"	"1706.90014"	"0.18"	"0.00015"	"6/104"	"6"	"104"	"652277.480041504"	"HCD"	"MS2"	"0"	"49.4"	"100.000"	"50.4725"	"15547"	"15547"	"15524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.9"	""	"58.5"	""	"76.8"	""	"64.5"	"1.0"	"79.9"	"83.5"	""	"1090"	"37"	"37.000"	"30.000"	"0.0104567446366531"	"18"	"0"	"0.0001366"	"0.626"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8500"	"0.0000"	"1"	"1"	"1"	"853.96295"	"1706.91863"	"1706.92127"	"-1.55"	"-0.00132"	"9/102"	"9"	"102"	"410660.512573242"	"HCD"	"MS2"	"0"	"41.6"	"100.000"	"56.1791"	"17830"	"17830"	"17816"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.1"	""	"41.0"	""	"44.1"	""	"80.6"	"0.6"	"81.4"	"83.2"	""	"1150"	"60"	"37.000"	"30.000"	"5.52927060070607E-05"	"25"	"0"	"8.848E-06"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8387"	"0.0000"	"1"	"1"	"1"	"853.96399"	"1706.92070"	"1706.92127"	"-0.33"	"-0.00028"	"12/102"	"12"	"102"	"586323.173950195"	"HCD"	"MS2"	"0"	"59.0"	"100.000"	"56.0561"	"17813"	"17813"	"17796"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.3"	""	"54.2"	""	"71.2"	""	"112.4"	""	"123.8"	"119.8"	""	"1142"	"31"	"37.000"	"30.000"	"0.0406102916296051"	"20"	"9.9E-05"	"0.0007439"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.8113"	"0.0000"	"1"	"1"	"1"	"853.96436"	"1706.92143"	"1706.92127"	"0.10"	"0.00008"	"12/102"	"12"	"102"	"521792.664489746"	"HCD"	"MS2"	"0"	"45.7"	"100.000"	"56.4747"	"17948"	"17948"	"17931"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.3"	""	"45.2"	""	"52.8"	""	"85.9"	""	"87.9"	"94.7"	""	"1134"	"53"	"37.000"	"30.000"	"0.000274525732420184"	"26"	"0"	"2.531E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDTVDSTTDIK"	"[K].gPDTVDSTTDIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"P14562"	"Lysosome-associated membrane glycoprotein 1 OS=Rattus norvegicus OX=10116 GN=Lamp1 PE=1 SV=1"	"0"	"2"	"2"	"0.9259"	"0.0000"	"1"	"1"	"1"	"853.96472"	"1706.92217"	"1706.92127"	"0.53"	"0.00045"	"14/102"	"14"	"102"	"225046.449035645"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"55.7308"	"17684"	"17684"	"17667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.4"	""	"20.1"	""	"24.7"	""	"46.2"	""	"45.7"	"41.4"	""	"1151"	"54"	"37.000"	"30.000"	"0.000238806051536076"	"20"	"9.9E-05"	"0.0004062"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"853.97681"	"1706.94634"	"1706.94776"	"-0.83"	"-0.00071"	"7/114"	"7"	"114"	"222282.678283691"	"HCD"	"MS2"	"0"	"17.2"	"100.000"	"62.1598"	"20289"	"20289"	"20271"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"20.2"	""	"21.8"	""	"26.6"	""	"34.9"	"35.5"	""	"1132"	"50"	"37.000"	"30.000"	"0.000609279310914486"	"19"	"0"	"2.141E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"853.97687"	"1706.94646"	"1706.94776"	"-0.76"	"-0.00065"	"5/114"	"5"	"114"	"134766.500427246"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"61.7631"	"20096"	"20096"	"20068"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"10.5"	""	"13.8"	""	"21.9"	""	"18.4"	"19.5"	""	"1131"	"26"	"37.000"	"30.000"	"0.148741654941684"	"15"	"0.0001991"	"0.003272"	"0.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8852"	"0.0000"	"1"	"1"	"1"	"853.97717"	"1706.94707"	"1706.94776"	"-0.40"	"-0.00034"	"8/114"	"8"	"114"	"458373.226013184"	"HCD"	"MS2"	"0"	"35.4"	"100.000"	"62.0667"	"20218"	"20218"	"20199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.2"	""	"45.7"	""	"45.9"	""	"66.9"	"0.2"	"63.2"	"61.1"	""	"1141"	"61"	"37.000"	"30.000"	"4.76711521900927E-05"	"24"	"0"	"2.245E-05"	"0.787"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"2"	"2"	"0.8833"	"0.0000"	"1"	"1"	"1"	"853.97729"	"1706.94731"	"1706.94776"	"-0.26"	"-0.00022"	"8/114"	"8"	"114"	"415606.082397461"	"HCD"	"MS2"	"0"	"33.4"	"100.000"	"61.8679"	"20171"	"20171"	"20145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.4"	""	"39.8"	""	"44.3"	""	"59.2"	""	"56.6"	"65.8"	""	"1125"	"60"	"37.000"	"30.000"	"5.47170313374544E-05"	"24"	"0"	"7.64E-06"	"0.884"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"569.65399"	"1706.94742"	"1706.94776"	"-0.20"	"-0.00011"	"7/114"	"7"	"114"	"2957117.69842529"	"HCD"	"MS2"	"11.74296"	"74.0"	"100.000"	"62.0444"	"20242"	"20242"	"20223"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.0"	""	"92.1"	""	"104.4"	""	"118.8"	"5.4"	"136.8"	"131.9"	""	"1125"	"48"	"37.000"	"30.000"	"0.000859255907758917"	"21"	"0"	"0.0001248"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9020"	"0.0000"	"1"	"1"	"1"	"569.65399"	"1706.94742"	"1706.94776"	"-0.20"	"-0.00011"	"7/114"	"7"	"114"	"3055849.5647583"	"HCD"	"MS2"	"8.237048"	"81.8"	"100.000"	"62.0925"	"20228"	"20228"	"20215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.2"	""	"101.3"	""	"97.0"	""	"148.8"	""	"162.2"	"150.6"	""	"1125"	"51"	"37.000"	"30.000"	"0.000447839634609742"	"21"	"0"	"4.728E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.9149"	"0.0000"	"1"	"1"	"1"	"569.65411"	"1706.94779"	"1706.94776"	"0.02"	"0.00001"	"7/114"	"7"	"114"	"1318222.97711182"	"HCD"	"MS2"	"39.13061"	"43.9"	"100.000"	"61.7219"	"20112"	"20112"	"20086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.6"	""	"55.1"	""	"60.3"	""	"69.4"	""	"87.8"	"87.2"	""	"1120"	"47"	"37.000"	"30.000"	"0.00109948175502819"	"19"	"0"	"3.119E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENSVVFNNTPK"	"[K].eNSVVFNNTPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"569.65424"	"1706.94815"	"1706.94776"	"0.23"	"0.00013"	"6/114"	"6"	"114"	"1516332.34515381"	"HCD"	"MS2"	"28.14953"	"46.5"	"100.000"	"61.7932"	"20108"	"20108"	"20084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"64.3"	""	"72.5"	""	"75.2"	""	"87.2"	"82.7"	""	"1116"	"35"	"37.000"	"30.000"	"0.0166201216762149"	"22"	"0"	"0.0003459"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSWIDTGLSEMR"	"[R].aPSWIDTGLSEmR.[M]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"0.4762"	"0.0000"	"1"	"1"	"1"	"569.95776"	"1707.85874"	"1707.85734"	"0.82"	"0.00047"	"12/112"	"12"	"112"	"933426.268249512"	"HCD"	"MS2"	"23.06462"	"20.1"	"100.000"	"98.3050"	"34878"	"34878"	"34855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"22.6"	""	"32.3"	""	"33.7"	"2.2"	"32.4"	"35.7"	""	"861"	"21"	"36.000"	"29.000"	"0.351538710869874"	"25"	"9.9E-05"	"0.0004482"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APSWIDTGLSEMR"	"[R].aPSWIDTGLSEmR.[M]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"P23928"	"Alpha-crystallin B chain OS=Rattus norvegicus OX=10116 GN=Cryab PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.95813"	"1707.85984"	"1707.85734"	"1.46"	"0.00083"	"11/112"	"11"	"112"	"577433.707763672"	"HCD"	"MS2"	"5.638264"	"11.8"	"100.000"	"98.3055"	"34908"	"34908"	"34891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"18.8"	""	"16.0"	""	"24.1"	""	"19.7"	"19.0"	""	"867"	"22"	"36.000"	"29.000"	"0.288395913213455"	"14"	"0.0001686"	"0.001811"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYQGPSSPDKS"	"[K].aIYQGPSSPDkS.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"1"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"569.98120"	"1707.92905"	"1707.93177"	"-1.59"	"-0.00091"	"12/112"	"12"	"112"	"1058283.64611816"	"HCD"	"MS2"	"4.872734"	"38.2"	"100.000"	"53.1498"	"16633"	"16633"	"16609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.2"	""	"41.4"	""	"56.2"	""	"57.9"	""	"70.3"	"79.9"	""	"1091"	"45"	"37.000"	"30.000"	"0.00190456042093569"	"17"	"9.9E-05"	"0.000576"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEFTSGGPLGQK"	"[K].eEFTSGGPLGQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"3"	"854.46826"	"1707.92925"	"1707.93177"	"-1.48"	"-0.00126"	"3/98"	"3"	"98"	"88860.6299438477"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"76.6046"	"26151"	"26151"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"8.2"	""	"5.5"	""	"10.7"	""	"17.6"	"13.8"	""	"1093"	"5"	"37.000"	"30.000"	"16.5802153216217"	"14"	"0.009444"	"0.1257"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYQGPSSPDKS"	"[K].aIYQGPSSPDkS.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"1"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"569.98145"	"1707.92978"	"1707.93177"	"-1.16"	"-0.00066"	"13/112"	"13"	"112"	"1538857.44366455"	"HCD"	"MS2"	"12.19"	"43.3"	"100.000"	"53.4512"	"16722"	"16722"	"16698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.3"	""	"56.1"	""	"46.7"	""	"70.5"	""	"87.5"	"80.4"	""	"1091"	"59"	"37.000"	"30.000"	"7.35859252453746E-05"	"23"	"0"	"9.992E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYQGPSSPDKS"	"[K].aIYQGPSSPDkS.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"1"	"2"	"2"	"0.9070"	"0.0000"	"1"	"1"	"1"	"854.46875"	"1707.93022"	"1707.93177"	"-0.91"	"-0.00077"	"13/112"	"13"	"112"	"157880.354064941"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"53.2323"	"16633"	"16633"	"16602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"11.0"	""	"13.1"	""	"21.2"	""	"19.5"	"19.0"	""	"1090"	"43"	"37.000"	"30.000"	"0.00302271013562061"	"20"	"0.0001991"	"0.005205"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEFTSGGPLGQK"	"[K].eEFTSGGPLGQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9189"	"0.0000"	"1"	"1"	"1"	"569.98169"	"1707.93052"	"1707.93177"	"-0.74"	"-0.00042"	"11/98"	"11"	"98"	"683493.702270508"	"HCD"	"MS2"	"11.34693"	"26.3"	"100.000"	"76.2611"	"26011"	"26011"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.1"	""	"27.2"	""	"33.2"	""	"49.0"	""	"54.5"	"53.6"	""	"1087"	"37"	"37.000"	"30.000"	"0.0117543751764564"	"18"	"0"	"0.0001662"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEFTSGGPLGQK"	"[K].eEFTSGGPLGQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"854.46918"	"1707.93108"	"1707.93177"	"-0.41"	"-0.00035"	"7/98"	"7"	"98"	"118082.148071289"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"76.1404"	"25930"	"25930"	"25909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"11.3"	""	"9.6"	""	"17.8"	""	"23.1"	"24.6"	""	"1108"	"18"	"37.000"	"30.000"	"0.863992086566133"	"17"	"0.00329"	"0.03569"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIYQGPSSPDKS"	"[K].aIYQGPSSPDkS.[-]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"P22734"	"Catechol O-methyltransferase OS=Rattus norvegicus OX=10116 GN=Comt PE=1 SV=2"	"1"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"854.46924"	"1707.93120"	"1707.93177"	"-0.33"	"-0.00029"	"9/112"	"9"	"112"	"199697.357727051"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"52.9724"	"16561"	"16561"	"16530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.1"	""	"16.9"	""	"21.5"	""	"27.4"	""	"33.2"	"25.2"	""	"1101"	"18"	"37.000"	"30.000"	"0.901067495046009"	"25"	"0.002525"	"0.02399"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEFTSGGPLGQK"	"[K].eEFTSGGPLGQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"854.46954"	"1707.93181"	"1707.93177"	"0.02"	"0.00002"	"5/98"	"5"	"98"	"138057.882324219"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"76.2843"	"26020"	"26020"	"25998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"12.6"	""	"14.2"	""	"25.8"	"1.3"	"30.8"	"24.7"	""	"1070"	"26"	"37.000"	"30.000"	"0.142676938551899"	"16"	"0.001261"	"0.00962"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEFTSGGPLGQK"	"[K].eEFTSGGPLGQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.46991"	"1707.93254"	"1707.93177"	"0.45"	"0.00039"	"6/98"	"6"	"98"	"124337.618469238"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"76.4494"	"26056"	"26056"	"26032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.8"	""	"9.6"	""	"13.3"	""	"20.2"	""	"22.0"	"19.5"	""	"1072"	"11"	"37.000"	"30.000"	"4.50987795921825"	"13"	"0.005832"	"0.0715"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEFTSGGPLGQK"	"[K].eEFTSGGPLGQk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"P63004"	"Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus OX=10116 GN=Pafah1b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"569.98242"	"1707.93271"	"1707.93177"	"0.55"	"0.00031"	"12/98"	"12"	"98"	"789019.347961426"	"HCD"	"MS2"	"15.29348"	"27.2"	"100.000"	"76.1796"	"25946"	"25946"	"25923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"31.2"	""	"33.5"	""	"47.0"	""	"55.2"	"51.3"	""	"1066"	"47"	"37.000"	"30.000"	"0.000985660173915316"	"16"	"0"	"2.414E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQPDRPVGLEQLR"	"[R].aQPDRPVGLEQLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q562C9"	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Rattus norvegicus OX=10116 GN=Adi1 PE=2 SV=1"	"Q562C9"	"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Rattus norvegicus OX=10116 GN=Adi1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"569.99597"	"1707.97336"	"1707.97033"	"1.77"	"0.00101"	"9/130"	"9"	"130"	"3276209.90661621"	"HCD"	"MS2"	"45.78918"	"113.3"	"100.000"	"49.1658"	"15014"	"15014"	"14999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"194.4"	""	"144.6"	""	"133.6"	""	"196.0"	""	"213.0"	"192.9"	""	"944"	"11"	"36.000"	"29.000"	"3.98971614915657"	"13"	"0.0001991"	"0.002175"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEDGNANFLGK"	"[K].dAEDGNANFLGk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.94788"	"1708.88848"	"1708.89063"	"-1.26"	"-0.00108"	"7/106"	"7"	"106"	"141242.41809082"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"74.9374"	"25441"	"25441"	"25419"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"18.0"	""	"18.0"	""	"19.7"	""	"23.7"	"20.4"	""	"1064"	"41"	"37.000"	"30.000"	"0.00394377048372088"	"15"	"9.9E-05"	"0.0005481"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAEDGNANFLGK"	"[K].dAEDGNANFLGk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"P19686"	"Guanylate cyclase soluble subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Gucy1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"854.94873"	"1708.89018"	"1708.89063"	"-0.26"	"-0.00023"	"4/106"	"4"	"106"	"115625.548156738"	"HCD"	"MS2"	"100"	"13.0"	"100.000"	"75.0444"	"25516"	"25516"	"25488"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"18.9"	""	"16.5"	""	"22.0"	""	"19.8"	"26.5"	""	"1072"	"5"	"37.000"	"30.000"	"18.1202752206406"	"13"	"0.004234"	"0.04872"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIHEYDFEIK"	"[K].gIHEYDFEIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"570.31433"	"1708.92844"	"1708.93104"	"-1.52"	"-0.00087"	"8/80"	"8"	"80"	"473912.969543457"	"HCD"	"MS2"	"40.47628"	"19.4"	"100.000"	"86.1472"	"29976"	"29976"	"29964"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.7"	""	"22.5"	""	"26.8"	""	"32.5"	"1.8"	"40.9"	"36.9"	""	"1139"	"37"	"37.000"	"30.000"	"0.011953462637236"	"19"	"9.9E-05"	"0.0007008"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIHEYDFEIK"	"[K].gIHEYDFEIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.31445"	"1708.92881"	"1708.93104"	"-1.31"	"-0.00075"	"10/80"	"10"	"80"	"1026603.234375"	"HCD"	"MS2"	"4.161627"	"31.3"	"100.000"	"86.4460"	"30127"	"30127"	"30117"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.7"	""	"41.6"	""	"42.6"	""	"56.5"	""	"55.7"	"60.1"	""	"1138"	"29"	"37.000"	"30.000"	"0.0716328559310882"	"15"	"0.0001991"	"0.002665"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIHEYDFEIK"	"[K].gIHEYDFEIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"570.31506"	"1708.93064"	"1708.93104"	"-0.24"	"-0.00014"	"11/80"	"11"	"80"	"596804.584838867"	"HCD"	"MS2"	"18.1369"	"20.2"	"100.000"	"86.1717"	"30018"	"30018"	"29995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"24.5"	""	"30.8"	""	"34.7"	""	"38.8"	"39.7"	""	"1127"	"31"	"37.000"	"30.000"	"0.0467620907494377"	"16"	"0"	"0.0001544"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIHEYDFEIK"	"[K].gIHEYDFEIk.[N]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"Q6Q7Y5"	"Guanine nucleotide-binding protein subunit alpha-13 OS=Rattus norvegicus OX=10116 GN=Gna13 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"570.31506"	"1708.93064"	"1708.93104"	"-0.24"	"-0.00014"	"10/80"	"10"	"80"	"912041.526672363"	"HCD"	"MS2"	"12.13484"	"30.2"	"100.000"	"86.4281"	"30088"	"30088"	"30079"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.4"	""	"38.4"	""	"41.8"	""	"44.7"	"0.7"	"60.4"	"59.5"	""	"1127"	"31"	"37.000"	"30.000"	"0.045802999585847"	"20"	"0.0001686"	"0.001925"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"570.33417"	"1708.98795"	"1708.98856"	"-0.36"	"-0.00020"	"8/108"	"8"	"108"	"1830922.08087158"	"HCD"	"MS2"	"58.27913"	"42.5"	"100.000"	"98.3536"	"34897"	"34897"	"34884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"60.9"	""	"62.2"	""	"66.1"	"0.6"	"77.3"	"79.6"	""	"856"	"37"	"36.000"	"29.000"	"0.00859891723796537"	"22"	"0"	"6.656E-05"	"0.69"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"570.33435"	"1708.98850"	"1708.98856"	"-0.03"	"-0.00002"	"8/108"	"8"	"108"	"1172739.43292236"	"HCD"	"MS2"	"57.07718"	"31.1"	"100.000"	"98.3563"	"34928"	"34928"	"34913"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.7"	""	"40.4"	""	"49.6"	""	"51.9"	""	"52.7"	"56.6"	""	"831"	"28"	"36.000"	"29.000"	"0.0606137325144408"	"23"	"0"	"0.0001013"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.7400"	"0.0000"	"1"	"1"	"1"	"854.99835"	"1708.98943"	"1708.98856"	"0.51"	"0.00043"	"10/108"	"10"	"108"	"802815.579101563"	"HCD"	"MS2"	"38.90792"	"68.8"	"100.000"	"98.4602"	"34970"	"34970"	"34951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.2"	""	"91.2"	""	"109.0"	""	"112.8"	"0.2"	"123.6"	"127.7"	""	"833"	"50"	"36.000"	"29.000"	"0.000413632834167319"	"29"	"0"	"7.352E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.33466"	"1708.98941"	"1708.98856"	"0.50"	"0.00029"	"8/108"	"8"	"108"	"806893.996704102"	"HCD"	"MS2"	"77.38102"	"36.7"	"100.000"	"98.6836"	"35031"	"35031"	"35010"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.5"	""	"45.3"	""	"59.1"	""	"53.2"	""	"62.3"	"70.1"	""	"833"	"17"	"36.000"	"29.000"	"0.848428025364432"	"14"	"9.9E-05"	"0.0006227"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"854.99860"	"1708.98992"	"1708.98856"	"0.79"	"0.00068"	"5/108"	"5"	"108"	"99502.4153442383"	"HCD"	"MS2"	"13.8319"	"8.2"	"100.000"	"98.7971"	"35107"	"35107"	"35081"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"12.0"	""	"11.1"	""	"12.2"	""	"12.2"	"17.5"	""	"810"	"15"	"36.000"	"29.000"	"1.40105448019579"	"15"	"0.001951"	"0.01668"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"854.99872"	"1708.99016"	"1708.98856"	"0.94"	"0.00080"	"9/108"	"9"	"108"	"878602.532287598"	"HCD"	"MS2"	"15.45142"	"70.2"	"100.000"	"98.4904"	"34983"	"34983"	"34967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.9"	""	"102.1"	""	"98.9"	""	"108.8"	"0.1"	"135.3"	"126.6"	""	"810"	"75"	"36.000"	"29.000"	"1.27483806721103E-06"	"27"	"0"	"4.22E-07"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8831"	"0.0000"	"1"	"1"	"1"	"854.99884"	"1708.99040"	"1708.98856"	"1.08"	"0.00092"	"10/108"	"10"	"108"	"1082972.88677979"	"HCD"	"MS2"	"23.16373"	"85.0"	"100.000"	"98.4712"	"34945"	"34945"	"34927"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"119.9"	""	"121.3"	""	"106.1"	""	"141.4"	""	"160.6"	"157.7"	""	"810"	"77"	"36.000"	"29.000"	"7.48953790686122E-07"	"26"	"0"	"5.826E-07"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVVDSAYEVIK"	"[K].qVVDSAYEVIk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8788"	"0.0000"	"1"	"1"	"1"	"854.99884"	"1708.99040"	"1708.98856"	"1.08"	"0.00092"	"8/108"	"8"	"108"	"974766.250915527"	"HCD"	"MS2"	"48.35975"	"80.4"	"100.000"	"98.4021"	"34917"	"34917"	"34895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.8"	""	"112.8"	""	"109.5"	""	"130.9"	""	"144.4"	"161.3"	""	"810"	"33"	"36.000"	"29.000"	"0.0202048217421305"	"19"	"0"	"2.191E-05"	"0.789"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAWGNPSSSYVAGR"	"[K].eAWGNPSSSYVAGR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"Q68FT9"	"Selenocysteine lyase OS=Rattus norvegicus OX=10116 GN=Scly PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"855.42444"	"1709.84160"	"1709.84446"	"-1.67"	"-0.00143"	"7/138"	"7"	"138"	"93907.3903808594"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"64.3813"	"21191"	"21191"	"21163"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.4"	""	"4.5"	""	"9.9"	""	"8.8"	""	"11.2"	"7.5"	""	"763"	"9"	"35.000"	"28.000"	"4.49256678898188"	"16"	"0.00511"	"0.06445"	"0.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEHHWGLITGNK"	"[-].mEHHWGLITGNk.[E]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"1"	"570.62592"	"1709.86319"	"1709.86309"	"0.06"	"0.00003"	"10/104"	"10"	"104"	"675211.392578125"	"HCD"	"MS2"	"5.750297"	"30.2"	"100.000"	"58.8531"	"18915"	"18915"	"18885"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.0"	""	"36.7"	""	"41.0"	""	"63.0"	""	"59.6"	"48.5"	""	"922"	"19"	"36.000"	"29.000"	"0.626182498876678"	"17"	"0.0001991"	"0.005221"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEHHWGLITGNK"	"[-].mEHHWGLITGNk.[E]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"570.62616"	"1709.86393"	"1709.86309"	"0.49"	"0.00028"	"9/104"	"9"	"104"	"642952.454284668"	"HCD"	"MS2"	"28.21573"	"26.3"	"100.000"	"58.6067"	"18850"	"18850"	"18827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.9"	""	"34.5"	""	"41.6"	""	"55.7"	""	"48.0"	"38.8"	""	"923"	"29"	"36.000"	"29.000"	"0.0553568928403438"	"25"	"9.9E-05"	"0.0008566"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAEDSPNTVLTFR"	"[R].mAEDSPNTVLTFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"855.43933"	"1709.87139"	"1709.87299"	"-0.94"	"-0.00080"	"4/124"	"4"	"124"	"122531.95690918"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"95.6458"	"33835"	"33835"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.4"	""	"7.7"	""	"13.0"	""	"8.2"	""	"13.5"	"17.7"	""	"958"	"16"	"36.000"	"29.000"	"1.28924517108099"	"20"	"0.004213"	"0.0476"	"0.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAEDSPNTVLTFR"	"[R].mAEDSPNTVLTFR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"Q5QE80"	"Aldehyde oxidase 3 OS=Rattus norvegicus OX=10116 GN=Aox3 PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"855.43939"	"1709.87151"	"1709.87299"	"-0.86"	"-0.00074"	"6/124"	"6"	"124"	"137551.199951172"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"95.6876"	"33819"	"33819"	"33792"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"12.7"	""	"18.4"	""	"11.3"	""	"15.0"	"17.6"	""	"957"	"28"	"36.000"	"29.000"	"0.0835375900172462"	"20"	"0.0001686"	"0.001664"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEMQPTHPIR"	"[K].kEmQPTHPIR.[L]"	"N-Term(TMT6plex); K1(TMT6plex); M3(Oxidation)"	"3"	"3"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"428.49786"	"1710.96963"	"1710.97253"	"-1.70"	"-0.00073"	"11/98"	"11"	"98"	"4744437.65698242"	"HCD"	"MS2"	"6.361938"	"168.4"	"100.000"	"21.0377"	"3690"	"3690"	"3674"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.0"	""	"171.1"	""	"203.1"	""	"421.6"	"1.7"	"311.7"	"305.7"	""	"916"	"21"	"36.000"	"29.000"	"0.35634074037623"	"14"	"0.00504"	"0.06393"	"0.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEMQPTHPIR"	"[K].kEmQPTHPIR.[L]"	"N-Term(TMT6plex); K1(TMT6plex); M3(Oxidation)"	"3"	"3"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"428.49792"	"1710.96987"	"1710.97253"	"-1.56"	"-0.00067"	"12/98"	"12"	"98"	"5411549.59741211"	"HCD"	"MS2"	"26.14017"	"222.0"	"100.000"	"21.0325"	"3725"	"3725"	"3706"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.1"	""	"254.2"	""	"268.4"	""	"463.1"	""	"426.1"	"445.3"	""	"914"	"17"	"36.000"	"29.000"	"0.950421386006389"	"14"	"0.002799"	"0.02974"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEMQPTHPIR"	"[K].kEmQPTHPIR.[L]"	"N-Term(TMT6plex); K1(TMT6plex); M3(Oxidation)"	"3"	"3"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3;14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1;14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"P35213; P68255; P63102"	"14-3-3 protein beta/alpha OS=Rattus norvegicus OX=10116 GN=Ywhab PE=1 SV=3; 14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1; 14-3-3 protein zeta/delta OS=Rattus norvegicus OX=10116 GN=Ywhaz PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"570.99493"	"1710.97025"	"1710.97253"	"-1.33"	"-0.00076"	"8/98"	"8"	"98"	"1384273.71368408"	"HCD"	"MS2"	"33.94414"	"63.6"	"100.000"	"21.0027"	"3713"	"3713"	"3697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.3"	""	"66.7"	""	"73.1"	""	"150.7"	"1.1"	"120.6"	"116.8"	""	"924"	"14"	"36.000"	"29.000"	"1.68516323479631"	"13"	"0.008135"	"0.1036"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEAVAEAHLGK"	"[K].lDEAVAEAHLGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"570.99713"	"1710.97684"	"1710.97906"	"-1.29"	"-0.00074"	"10/98"	"10"	"98"	"766133.311584473"	"HCD"	"MS2"	"4.085927"	"27.0"	"100.000"	"88.0134"	"30721"	"30721"	"30709"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.9"	""	"29.7"	""	"35.9"	""	"44.5"	""	"52.1"	"59.0"	""	"872"	"21"	"36.000"	"29.000"	"0.351954473188493"	"15"	"0"	"7.231E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LDEAVAEAHLGK"	"[K].lDEAVAEAHLGk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"570.99719"	"1710.97702"	"1710.97906"	"-1.19"	"-0.00068"	"7/98"	"7"	"98"	"689650.720275879"	"HCD"	"MS2"	"0"	"26.5"	"100.000"	"87.9108"	"30717"	"30717"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.9"	""	"32.3"	""	"40.6"	""	"29.8"	""	"60.7"	"50.6"	""	"864"	"27"	"36.000"	"29.000"	"0.0949475465043045"	"21"	"0"	"0.0002816"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLPDVAHVK"	"[R].dYPLPDVAHVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"571.33038"	"1711.97660"	"1711.97833"	"-1.01"	"-0.00058"	"12/90"	"12"	"90"	"1450191.05926514"	"HCD"	"MS2"	"9.997825"	"41.1"	"100.000"	"87.6182"	"30598"	"30598"	"30577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.3"	""	"54.9"	""	"59.7"	""	"60.3"	""	"79.3"	"83.3"	""	"908"	"49"	"36.000"	"29.000"	"0.000571552136954552"	"23"	"0"	"5.799E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYPLPDVAHVK"	"[R].dYPLPDVAHVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"P10888"	"Cytochrome c oxidase subunit 4 isoform 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox4i1 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"571.33057"	"1711.97715"	"1711.97833"	"-0.69"	"-0.00039"	"11/90"	"11"	"90"	"1373032.93688965"	"HCD"	"MS2"	"8.154278"	"37.0"	"100.000"	"87.7276"	"30607"	"30607"	"30588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"46.7"	""	"47.3"	""	"59.9"	""	"71.0"	"76.0"	""	"887"	"42"	"36.000"	"29.000"	"0.00265395542409252"	"22"	"0"	"6.036E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"856.93512"	"1712.86296"	"1712.86526"	"-1.34"	"-0.00115"	"17/134"	"17"	"134"	"256747.903686523"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"54.9160"	"17353"	"17353"	"17332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"15.9"	""	"13.6"	""	"23.8"	""	"24.7"	"28.9"	""	"905"	"44"	"36.000"	"29.000"	"0.00183492612290394"	"19"	"0"	"8.286E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8955"	"0.0000"	"1"	"1"	"1"	"856.93549"	"1712.86370"	"1712.86526"	"-0.91"	"-0.00078"	"9/134"	"9"	"134"	"223274.437866211"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"54.6243"	"17235"	"17235"	"17204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"15.5"	""	"18.7"	""	"25.1"	""	"27.7"	"21.4"	""	"907"	"67"	"36.000"	"29.000"	"8.68115061997061E-06"	"23"	"0"	"5.49E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9483"	"0.0000"	"1"	"1"	"1"	"856.93597"	"1712.86467"	"1712.86526"	"-0.34"	"-0.00029"	"9/134"	"9"	"134"	"236085.562072754"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"55.2954"	"17474"	"17474"	"17450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"14.8"	""	"16.4"	""	"24.5"	""	"24.7"	"23.5"	""	"900"	"58"	"36.000"	"29.000"	"6.74858175976067E-05"	"20"	"0"	"2.709E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSTVAGESGSADTVR"	"[R].fSTVAGESGSADTVR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.9149"	"0.0000"	"1"	"1"	"1"	"856.93646"	"1712.86565"	"1712.86526"	"0.23"	"0.00019"	"8/134"	"8"	"134"	"185064.068237305"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"54.9899"	"17350"	"17350"	"17319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"11.0"	""	"9.5"	""	"24.7"	""	"20.1"	"20.5"	""	"901"	"47"	"36.000"	"29.000"	"0.000960936733372532"	"19"	"0"	"1.877E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFSEQGINEFLR"	"[K].gSFSEQGINEFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.63147"	"1712.87986"	"1712.88051"	"-0.38"	"-0.00022"	"13/126"	"13"	"126"	"489177.779663086"	"HCD"	"MS2"	"43.82331"	"10.0"	"100.000"	"107.5988"	"38602"	"38602"	"38593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"10.5"	""	"20.5"	""	"13.3"	""	"16.8"	"23.1"	""	"954"	"41"	"36.000"	"29.000"	"0.00412589697256006"	"15"	"0"	"2.238E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFSEQGINEFLR"	"[K].gSFSEQGINEFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.94397"	"1712.88066"	"1712.88051"	"0.09"	"0.00007"	"7/126"	"7"	"126"	"108079.129516602"	"HCD"	"MS2"	"0"	"8.7"	"100.000"	"108.0639"	"38798"	"38798"	"38787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.9"	""	"13.7"	""	"12.6"	""	"14.8"	""	"15.0"	"13.0"	""	"945"	"37"	"36.000"	"29.000"	"0.00900330189237633"	"15"	"0.0001991"	"0.002265"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSFSEQGINEFLR"	"[K].gSFSEQGINEFLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.63177"	"1712.88077"	"1712.88051"	"0.15"	"0.00009"	"13/126"	"13"	"126"	"376905.374328613"	"HCD"	"MS2"	"30.06021"	"8.4"	"100.000"	"107.9087"	"38740"	"38740"	"38728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"10.1"	""	"17.5"	""	"11.1"	""	"14.1"	"16.4"	""	"945"	"36"	"36.000"	"29.000"	"0.012600907189864"	"15"	"0"	"9.95E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9756"	"0.0000"	"1"	"1"	"1"	"856.94873"	"1712.89018"	"1712.89294"	"-1.61"	"-0.00138"	"13/102"	"13"	"102"	"229036.391723633"	"HCD"	"MS2"	"9.595683"	"22.1"	"100.000"	"92.3055"	"32488"	"32488"	"32465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.7"	""	"20.5"	""	"34.9"	""	"29.4"	""	"45.8"	"37.9"	""	"960"	"41"	"36.000"	"29.000"	"0.00413277001048608"	"16"	"0"	"0.0001629"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9512"	"0.0000"	"1"	"1"	"1"	"856.95007"	"1712.89287"	"1712.89294"	"-0.04"	"-0.00004"	"15/102"	"15"	"102"	"240617.938598633"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"92.3639"	"32476"	"32476"	"32457"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"28.0"	""	"33.7"	""	"22.9"	"1.2"	"45.9"	"45.9"	""	"964"	"41"	"36.000"	"29.000"	"0.00361449008898244"	"17"	"0"	"4.078E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.8367"	"0.0000"	"1"	"1"	"1"	"856.95007"	"1712.89287"	"1712.89294"	"-0.04"	"-0.00004"	"8/102"	"8"	"102"	"320155.857543945"	"HCD"	"MS2"	"15.92218"	"29.2"	"100.000"	"91.9922"	"32361"	"32361"	"32342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"40.9"	""	"36.1"	""	"31.4"	"1.0"	"53.7"	"56.6"	""	"964"	"49"	"36.000"	"29.000"	"0.000595726662920254"	"23"	"0"	"1.935E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.6452"	"0.0000"	"1"	"1"	"1"	"856.95068"	"1712.89409"	"1712.89294"	"0.67"	"0.00057"	"8/102"	"8"	"102"	"378055.53338623"	"HCD"	"MS2"	"13.66327"	"31.5"	"100.000"	"92.0690"	"32357"	"32357"	"32334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.1"	""	"48.5"	""	"37.6"	""	"33.3"	""	"57.5"	"63.4"	""	"970"	"31"	"36.000"	"29.000"	"0.0396042450108917"	"25"	"0"	"0.0001974"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DQVDSYSLEAK"	"[K].dQVDSYSLEAk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.6111"	"0.0000"	"1"	"1"	"1"	"856.95978"	"1712.91228"	"1712.91070"	"0.92"	"0.00079"	"8/114"	"8"	"114"	"75052.1084594727"	"HCD"	"MS2"	"22.56097"	"7.1"	"100.000"	"71.1747"	"23916"	"23916"	"23886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"8.5"	""	"7.2"	""	"9.8"	""	"17.4"	"15.8"	""	"976"	"18"	"36.000"	"29.000"	"0.8658044666744"	"20"	"0.0001991"	"0.004974"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYYEALPELK"	"[K].eYYEALPELk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"856.97900"	"1712.95073"	"1712.95111"	"-0.22"	"-0.00019"	"5/86"	"5"	"86"	"124668.787780762"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"106.6420"	"38229"	"38229"	"38211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"11.9"	""	"17.2"	""	"9.9"	""	"13.6"	"16.0"	""	"985"	"27"	"36.000"	"29.000"	"0.10675942716237"	"18"	"0.0001686"	"0.001366"	"0.42"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYYEALPELK"	"[K].eYYEALPELk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.5789"	"0.0000"	"1"	"1"	"1"	"571.65515"	"1712.95090"	"1712.95111"	"-0.12"	"-0.00007"	"10/86"	"10"	"86"	"400769.166687012"	"HCD"	"MS2"	"61.9546"	"12.4"	"100.000"	"106.8834"	"38344"	"38344"	"38323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"14.3"	""	"20.5"	""	"17.8"	""	"23.3"	"21.3"	""	"981"	"38"	"36.000"	"29.000"	"0.00840696059332884"	""	"0"	"0.0002643"	"0.567"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYYEALPELK"	"[K].eYYEALPELk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"856.97955"	"1712.95183"	"1712.95111"	"0.42"	"0.00036"	"5/86"	"5"	"86"	"107800.921691895"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"106.9461"	"38368"	"38368"	"38356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.4"	""	"9.4"	""	"10.1"	""	"10.5"	""	"13.1"	"17.0"	""	"996"	"25"	"36.000"	"29.000"	"0.142308009060072"	"18"	"0.0001686"	"0.001438"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYYEALPELK"	"[K].eYYEALPELk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"P09811"	"Glycogen phosphorylase, liver form OS=Rattus norvegicus OX=10116 GN=Pygl PE=1 SV=5"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"571.65546"	"1712.95182"	"1712.95111"	"0.41"	"0.00024"	"9/86"	"9"	"86"	"407084.331481934"	"HCD"	"MS2"	"28.92398"	"13.0"	"100.000"	"106.5725"	"38202"	"38202"	"38180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"16.5"	""	"19.9"	""	"20.4"	""	"20.8"	"25.6"	""	"996"	"29"	"36.000"	"29.000"	"0.0638600630162699"	"19"	"0.0001686"	"0.001838"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"571.66278"	"1712.97379"	"1712.97442"	"-0.37"	"-0.00021"	"14/134"	"14"	"134"	"584473.583312988"	"HCD"	"MS2"	"27.76802"	"11.4"	"100.000"	"89.2784"	"31270"	"31270"	"31254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"10.7"	""	"14.5"	""	"22.4"	""	"22.4"	"25.5"	""	"875"	"21"	"36.000"	"29.000"	"0.374091686887049"	"14"	"0"	"0.0001304"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"856.99060"	"1712.97392"	"1712.97442"	"-0.29"	"-0.00025"	"7/134"	"7"	"134"	"108776.895324707"	"HCD"	"MS2"	"37.927"	"8.8"	"100.000"	"89.7182"	"31406"	"31406"	"31384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"8.1"	""	"7.1"	""	"18.0"	""	"16.0"	"24.8"	""	"873"	"3"	"36.000"	"29.000"	"24.0427559480958"	"13"	"0.009514"	"0.1265"	"0.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLEAQLTPQVVER"	"[K].tLEAQLTPQVVER.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"Q64268"	"Heparin cofactor 2 OS=Rattus norvegicus OX=10116 GN=Serpind1 PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"571.66333"	"1712.97544"	"1712.97442"	"0.60"	"0.00034"	"13/134"	"13"	"134"	"529409.526672363"	"HCD"	"MS2"	"46.78259"	"10.0"	"100.000"	"89.3716"	"31268"	"31268"	"31251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"13.4"	""	"9.0"	""	"21.2"	""	"16.5"	"20.7"	""	"866"	"24"	"36.000"	"29.000"	"0.185989272789196"	"24"	"0"	"6.046E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"857.41864"	"1713.83000"	"1713.83152"	"-0.88"	"-0.00076"	"5/126"	"5"	"126"	"118598.354614258"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"52.6043"	"16376"	"16376"	"16355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.8"	""	"4.2"	""	"8.2"	""	"10.1"	""	"10.8"	"10.4"	""	"598"	"10"	"34.000"	"27.000"	"3.2186309887532"	"14"	"0.002462"	"0.02295"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"857.41949"	"1713.83171"	"1713.83152"	"0.11"	"0.00010"	"6/126"	"6"	"126"	"178102.694580078"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"52.0146"	"16170"	"16170"	"16139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"6.4"	""	"8.9"	""	"13.0"	""	"13.6"	"13.8"	""	"618"	"21"	"34.000"	"27.000"	"0.238209171940909"	"16"	"0.0001686"	"0.001325"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFEGVDPQTTSMR"	"[K].tFEGVDPQTTSmR.[D]"	"N-Term(TMT6plex); M12(Oxidation)"	"1"	"1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"P50398"	"Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus OX=10116 GN=Gdi1 PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"857.42010"	"1713.83293"	"1713.83152"	"0.83"	"0.00071"	"5/126"	"5"	"126"	"153876.288391113"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"52.2746"	"16242"	"16242"	"16211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"7.2"	""	"9.9"	""	"8.7"	""	"11.7"	"10.2"	""	"619"	"30"	"34.000"	"27.000"	"0.029017544114356"	"18"	"9.9E-05"	"0.0009119"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7797"	"0.0000"	"1"	"1"	"1"	"857.46893"	"1713.93059"	"1713.93110"	"-0.30"	"-0.00026"	"14/96"	"14"	"96"	"240481.046630859"	"HCD"	"MS2"	"0"	"24.1"	"100.000"	"92.7327"	"32626"	"32626"	"32611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.1"	""	"27.3"	""	"23.8"	""	"36.2"	""	"57.2"	"55.5"	""	"1100"	"59"	"37.000"	"30.000"	"7.30066951751355E-05"	"29"	"0"	"4.972E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"571.98187"	"1713.93106"	"1713.93110"	"-0.02"	"-0.00001"	"11/96"	"11"	"96"	"4073189.644104"	"HCD"	"MS2"	"25.83706"	"85.8"	"100.000"	"92.3772"	"32517"	"32517"	"32497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.6"	""	"98.3"	""	"112.2"	""	"135.9"	"1.4"	"168.8"	"179.1"	""	"1101"	"30"	"37.000"	"30.000"	"0.0579105011539684"	"21"	"0"	"0.0002055"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"571.98187"	"1713.93106"	"1713.93110"	"-0.02"	"-0.00001"	"11/96"	"11"	"96"	"4379039.75958252"	"HCD"	"MS2"	"13.04871"	"95.4"	"100.000"	"92.4770"	"32522"	"32522"	"32504"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.3"	""	"113.0"	""	"123.0"	""	"156.8"	"0.2"	"200.5"	"187.1"	""	"1101"	"30"	"37.000"	"30.000"	"0.0580439986463388"	"24"	"0"	"0.0001826"	"0.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"857.46936"	"1713.93144"	"1713.93110"	"0.20"	"0.00017"	"11/96"	"11"	"96"	"191342.52947998"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"92.6716"	"32637"	"32637"	"32620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"14.9"	""	"18.9"	""	"27.9"	""	"39.9"	"37.6"	""	"1080"	"32"	"37.000"	"30.000"	"0.0329149924509691"	"20"	"0.000264"	"0.006113"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.7759"	"0.0000"	"1"	"1"	"1"	"857.47070"	"1713.93413"	"1713.93110"	"1.77"	"0.00151"	"18/96"	"18"	"96"	"491392.588684082"	"HCD"	"MS2"	"18.64549"	"45.5"	"100.000"	"92.3815"	"32519"	"32519"	"32497"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.9"	""	"55.3"	""	"49.8"	""	"76.4"	""	"90.4"	"93.5"	""	"1064"	"58"	"37.000"	"30.000"	"9.11825287594483E-05"	"29"	"0"	"2.184E-05"	"0.79"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSDIK"	"[R].dYETATLSDIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"2"	"2"	"0.6897"	"0.0000"	"1"	"1"	"1"	"857.47241"	"1713.93755"	"1713.93110"	"3.76"	"0.00322"	"11/96"	"11"	"96"	"411191.716918945"	"HCD"	"MS2"	"100"	"41.2"	"100.000"	"92.4517"	"32512"	"32512"	"32488"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.9"	""	"43.1"	""	"36.7"	""	"67.5"	""	"88.4"	"91.5"	""	"1046"	"29"	"37.000"	"30.000"	"0.0662981925843653"	"23"	"9.9E-05"	"0.0004787"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].qLQAETEPIVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"857.50983"	"1714.01238"	"1714.01511"	"-1.59"	"-0.00137"	"12/104"	"12"	"104"	"154369.890075684"	"HCD"	"MS2"	"33.16719"	"12.3"	"100.000"	"73.3288"	"24789"	"24789"	"24762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.9"	""	"12.3"	""	"19.6"	""	"20.4"	""	"22.7"	"22.6"	""	"684"	"40"	"35.000"	"28.000"	"0.00359770960847542"	"18"	"0"	"0.0001087"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].qLQAETEPIVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7647"	"0.0000"	"1"	"1"	"1"	"857.51007"	"1714.01286"	"1714.01511"	"-1.31"	"-0.00112"	"11/104"	"11"	"104"	"133469.209228516"	"HCD"	"MS2"	"32.46802"	"9.1"	"100.000"	"73.3990"	"24847"	"24847"	"24819"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"12.2"	""	"10.4"	""	"13.7"	""	"17.4"	"17.6"	""	"684"	"34"	"35.000"	"28.000"	"0.0126772806849641"	"22"	"0.0001686"	"0.00109"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLQAETEPIVK"	"[K].qLQAETEPIVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"857.51117"	"1714.01506"	"1714.01511"	"-0.03"	"-0.00002"	"3/104"	"3"	"104"	"77458.2645263672"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"73.7516"	"24991"	"24991"	"24960"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.7"	""	"6.3"	""	"5.9"	""	"7.6"	""	"11.3"	"11.5"	""	"656"	"7"	"35.000"	"28.000"	"6.66613099587081"	"15"	"0.008135"	"0.1035"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"572.29468"	"1714.86948"	"1714.87221"	"-1.59"	"-0.00091"	"7/92"	"7"	"92"	"1672723.23760986"	"HCD"	"MS2"	"10.34596"	"54.8"	"100.000"	"75.5425"	"25718"	"25718"	"25697"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.3"	""	"79.0"	""	"67.5"	""	"95.1"	"2.1"	"88.1"	"78.6"	""	"861"	"29"	"36.000"	"29.000"	"0.0570129030901304"	"19"	"0.0001686"	"0.001532"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.93896"	"1714.87065"	"1714.87221"	"-0.91"	"-0.00078"	"5/92"	"5"	"92"	"155250.426147461"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"75.4018"	"25661"	"25661"	"25635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"18.7"	""	"28.4"	""	"22.5"	""	"21.9"	"24.5"	""	"852"	"29"	"36.000"	"29.000"	"0.0483514607476407"	"14"	"0.0001991"	"0.005151"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.93976"	"1714.87224"	"1714.87221"	"0.02"	"0.00002"	"9/92"	"9"	"92"	"139693.283203125"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"75.2440"	"25566"	"25566"	"25537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.1"	""	"17.4"	""	"18.0"	""	"18.7"	"1.0"	"18.6"	"21.5"	""	"858"	"19"	"36.000"	"29.000"	"0.56034731100856"	"14"	"0.001872"	"0.01565"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.94049"	"1714.87370"	"1714.87221"	"0.87"	"0.00075"	"5/92"	"5"	"92"	"141559.227050781"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"75.5757"	"25701"	"25701"	"25677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.3"	""	"15.3"	""	"19.7"	""	"22.3"	""	"25.3"	"25.3"	""	"872"	"8"	"36.000"	"29.000"	"6.41928251060665"	"13"	"0.002755"	"0.02938"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.29620"	"1714.87406"	"1714.87221"	"1.08"	"0.00062"	"6/92"	"6"	"92"	"1782290.3807373"	"HCD"	"MS2"	"13.06044"	"65.0"	"100.000"	"75.4238"	"25639"	"25639"	"25615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.2"	""	"62.5"	""	"91.2"	""	"103.7"	"5.3"	"107.5"	"115.6"	""	"873"	"19"	"36.000"	"29.000"	"0.602537731499159"	"14"	"0.001348"	"0.01106"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYTEMNDLQK"	"[R].dYTEMNDLQk.[R]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.94086"	"1714.87444"	"1714.87221"	"1.30"	"0.00111"	"5/92"	"5"	"92"	"146077.758178711"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"75.7105"	"25787"	"25787"	"25761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.6"	""	"16.8"	""	"24.4"	""	"21.4"	""	"30.9"	"27.0"	""	"880"	"14"	"36.000"	"29.000"	"1.61976748402714"	"13"	"0.005956"	"0.07285"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSVQPTFTASQYR"	"[R].tSVQPTFTASQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"857.95142"	"1714.89556"	"1714.89616"	"-0.36"	"-0.00030"	"4/132"	"4"	"132"	"103485.1640625"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"61.0217"	"19798"	"19798"	"19772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"7.2"	""	"9.5"	""	"10.1"	""	"13.1"	"9.1"	""	"954"	"14"	"36.000"	"29.000"	"1.95217334691215"	"19"	"0.0001991"	"0.004997"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSVQPTFTASQYR"	"[R].tSVQPTFTASQYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"Q2TL32"	"E3 ubiquitin-protein ligase UBR4 OS=Rattus norvegicus OX=10116 GN=Ubr4 PE=1 SV=2"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"857.95221"	"1714.89714"	"1714.89616"	"0.57"	"0.00049"	"4/132"	"4"	"132"	"83055.0065307617"	"HCD"	"MS2"	"28.53101"	"4.8"	"100.000"	"60.8675"	"19767"	"19767"	"19744"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.2"	""	"5.1"	""	"5.9"	""	"5.3"	""	"12.2"	"8.8"	""	"953"	"14"	"36.000"	"29.000"	"1.89698066768742"	"15"	"0.001049"	"0.008866"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.96051"	"1714.91374"	"1714.91729"	"-2.07"	"-0.00178"	"7/128"	"7"	"128"	"173115.826843262"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"94.6773"	"33443"	"33443"	"33423"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.5"	""	"15.6"	""	"11.9"	""	"16.4"	""	"14.7"	"13.7"	""	"980"	"29"	"36.000"	"29.000"	"0.0673280567756133"	"14"	"9.9E-05"	"0.0007912"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9767"	"0.0000"	"1"	"1"	"1"	"857.96106"	"1714.91484"	"1714.91729"	"-1.43"	"-0.00123"	"10/128"	"10"	"128"	"353105.199401855"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"94.7402"	"33434"	"33434"	"33418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"26.0"	""	"23.8"	""	"31.4"	""	"35.6"	"28.6"	""	"998"	"43"	"36.000"	"29.000"	"0.00269215800635048"	"16"	"0"	"6.201E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"572.31012"	"1714.91581"	"1714.91729"	"-0.87"	"-0.00050"	"16/128"	"16"	"128"	"1555623.31958008"	"HCD"	"MS2"	"13.77624"	"23.5"	"100.000"	"94.8553"	"33481"	"33481"	"33459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.8"	""	"26.8"	""	"29.4"	""	"43.2"	""	"43.9"	"42.2"	""	"983"	"57"	"36.000"	"29.000"	"9.85198001449978E-05"	"27"	"0"	"1.483E-06"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"572.31030"	"1714.91635"	"1714.91729"	"-0.55"	"-0.00031"	"15/128"	"15"	"128"	"1078682.92541504"	"HCD"	"MS2"	"1.40334"	"19.3"	"100.000"	"95.1734"	"33610"	"33610"	"33592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.8"	""	"20.3"	""	"29.1"	""	"29.1"	"1.2"	"31.5"	"41.9"	""	"967"	"49"	"36.000"	"29.000"	"0.00064031913226662"	"18"	"0"	"4.917E-07"	"1.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"857.96210"	"1714.91692"	"1714.91729"	"-0.22"	"-0.00019"	"13/128"	"13"	"128"	"2690352.67559814"	"HCD"	"MS2"	"0"	"115.8"	"100.000"	"95.0560"	"33563"	"33563"	"33546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"216.7"	""	"136.2"	""	"165.6"	""	"172.5"	"0.4"	"220.3"	"183.9"	""	"986"	"72"	"36.000"	"29.000"	"3.31014424492495E-06"	"21"	"0"	"3.548E-09"	"1.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"572.31055"	"1714.91709"	"1714.91729"	"-0.12"	"-0.00007"	"15/128"	"15"	"128"	"1202174.50323486"	"HCD"	"MS2"	"2.250972"	"19.3"	"100.000"	"95.1386"	"33629"	"33629"	"33607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.1"	""	"24.2"	""	"27.0"	""	"32.0"	""	"33.4"	"36.5"	""	"986"	"47"	"36.000"	"29.000"	"0.00102057968495398"	"22"	"0"	"2.776E-06"	"0.974"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"857.96222"	"1714.91716"	"1714.91729"	"-0.08"	"-0.00007"	"10/128"	"10"	"128"	"308364.571777344"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"95.2699"	"33682"	"33682"	"33668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"18.1"	""	"21.7"	""	"23.7"	""	"25.2"	"29.4"	""	"986"	"45"	"36.000"	"29.000"	"0.00144493036990841"	"15"	"0"	"7.581E-05"	"0.679"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.8136"	"0.0000"	"1"	"1"	"1"	"572.31061"	"1714.91727"	"1714.91729"	"-0.01"	"-0.00001"	"17/128"	"17"	"128"	"1340156.49645996"	"HCD"	"MS2"	"16.60598"	"19.8"	"100.000"	"94.8203"	"33500"	"33500"	"33480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.6"	""	"25.5"	""	"28.7"	""	"32.8"	""	"36.1"	"36.1"	""	"985"	"59"	"36.000"	"29.000"	"5.66769191555135E-05"	"27"	"0"	"8.861E-07"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"857.96234"	"1714.91741"	"1714.91729"	"0.07"	"0.00006"	"7/128"	"7"	"128"	"168808.836486816"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"95.3554"	"33684"	"33684"	"33665"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"11.5"	""	"15.0"	""	"12.9"	""	"20.5"	"23.8"	""	"981"	"40"	"36.000"	"29.000"	"0.00441203563740482"	"16"	"0"	"0.0001844"	"0.599"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSDDLPLNVSR"	"[K].gVVDSDDLPLNVSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"857.96246"	"1714.91765"	"1714.91729"	"0.21"	"0.00018"	"13/128"	"13"	"128"	"2855966.41424561"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"94.9748"	"33563"	"33563"	"33548"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"228.6"	""	"153.2"	""	"164.1"	""	"181.9"	""	"221.8"	"217.3"	""	"973"	"70"	"36.000"	"29.000"	"5.43353970045243E-06"	"19"	"0"	"3.418E-08"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AFSDPSNLRTHLK"	"[K].aFSDPSNLRTHLK.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZP2"	"PR domain zinc finger protein 4 OS=Rattus norvegicus OX=10116 GN=Prdm4 PE=2 SV=1"	"Q9QZP2"	"PR domain zinc finger protein 4 OS=Rattus norvegicus OX=10116 GN=Prdm4 PE=2 SV=1"	"1"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"572.31921"	"1714.94309"	"1714.94378"	"-0.41"	"-0.00023"	"5/122"	"5"	"122"	"960369.89453125"	"HCD"	"MS2"	"41.92838"	"25.5"	"100.000"	"105.4162"	"37744"	"37744"	"37718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.1"	""	"26.6"	""	"30.2"	""	"46.8"	""	"47.2"	"53.7"	""	"945"	"2"	"36.000"	"29.000"	"27.1895370391807"	"15"	"0.009312"	"0.1206"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEMQVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.8298"	"0.0000"	"1"	"1"	"1"	"858.49182"	"1715.97637"	"1715.97661"	"-0.14"	"-0.00012"	"13/106"	"13"	"106"	"174148.563171387"	"HCD"	"MS2"	"21.43744"	"13.3"	"100.000"	"93.5839"	"33000"	"33000"	"32984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.1"	""	"14.7"	""	"20.0"	""	"17.3"	"1.1"	"27.3"	"27.6"	""	"919"	"47"	"36.000"	"29.000"	"0.000929577312602667"	"24"	"0"	"0.0001258"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEMQVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"858.49359"	"1715.97991"	"1715.97661"	"1.92"	"0.00165"	"11/106"	"11"	"106"	"141477.567993164"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"93.6141"	"32977"	"32977"	"32951"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.9"	""	"18.7"	""	"17.1"	""	"10.0"	""	"21.5"	"21.7"	""	"892"	"33"	"36.000"	"29.000"	"0.0229263468605762"	"16"	"0"	"0.0003882"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.6800"	"0.0000"	"1"	"1"	"1"	"572.66589"	"1715.98313"	"1715.98314"	"-0.01"	"0.00000"	"7/96"	"7"	"96"	"775681.53137207"	"HCD"	"MS2"	"50.32099"	"21.8"	"100.000"	"104.6011"	"37419"	"37419"	"37403"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"18.6"	""	"16.9"	""	"53.2"	"0.6"	"53.4"	"45.4"	""	"921"	"25"	"36.000"	"29.000"	"0.152485881442733"	"22"	"0"	"6.784E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"572.66595"	"1715.98331"	"1715.98314"	"0.10"	"0.00006"	"10/96"	"10"	"96"	"768043.82611084"	"HCD"	"MS2"	"18.62716"	"20.8"	"100.000"	"104.9036"	"37558"	"37558"	"37551"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.6"	""	"17.9"	""	"22.1"	""	"45.7"	""	"51.1"	"42.5"	""	"871"	"28"	"36.000"	"29.000"	"0.0654618326232204"	"22"	"0"	"0.0001346"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.49542"	"1715.98357"	"1715.98314"	"0.25"	"0.00022"	"9/96"	"9"	"96"	"97104.8543701172"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"105.0011"	"37596"	"37596"	"37579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"7.1"	""	"5.4"	""	"17.9"	""	"15.0"	"13.8"	""	"877"	"27"	"36.000"	"29.000"	"0.0885053650474365"	"14"	"0.001488"	"0.01224"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEPEILELESK"	"[K].aEPEILELESk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"Q5QD51"	"A-kinase anchor protein 12 OS=Rattus norvegicus OX=10116 GN=Akap12 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.49542"	"1715.98357"	"1715.98314"	"0.25"	"0.00022"	"9/96"	"9"	"96"	"89388.9889526367"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"104.7544"	"37479"	"37479"	"37463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"4.8"	""	"9.4"	""	"10.5"	""	"14.1"	"19.4"	""	"877"	"23"	"36.000"	"29.000"	"0.206048566623387"	"14"	"0.002462"	"0.02319"	"0.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"572.95868"	"1716.86148"	"1716.86420"	"-1.58"	"-0.00090"	"13/118"	"13"	"118"	"2119483.50634766"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"76.8130"	"26204"	"26204"	"26184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"30.9"	""	"29.1"	""	"37.0"	""	"59.1"	"47.8"	""	"728"	"43"	"35.000"	"28.000"	"0.00187543226627759"	"18"	"0"	"0.0003086"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"858.93439"	"1716.86150"	"1716.86420"	"-1.57"	"-0.00135"	"13/118"	"13"	"118"	"268521.192565918"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"76.9686"	"26266"	"26266"	"26251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"11.1"	""	"17.4"	""	"24.7"	""	"36.0"	"31.9"	""	"728"	"44"	"35.000"	"28.000"	"0.0015779795973306"	"21"	"9.9E-05"	"0.000687"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8545"	"0.0000"	"1"	"1"	"1"	"572.95892"	"1716.86222"	"1716.86420"	"-1.15"	"-0.00066"	"10/118"	"10"	"118"	"2993875.19207764"	"HCD"	"MS2"	"1.257849"	"27.4"	"100.000"	"76.8554"	"26252"	"26252"	"26234"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.8"	""	"28.1"	""	"38.3"	""	"50.3"	""	"51.3"	"54.3"	""	"753"	"55"	"35.000"	"28.000"	"0.000133279998917913"	"23"	"0"	"0.000109"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"572.95917"	"1716.86295"	"1716.86420"	"-0.73"	"-0.00042"	"13/118"	"13"	"118"	"3479311.83007813"	"HCD"	"MS2"	"11.09204"	"41.5"	"100.000"	"76.2026"	"25955"	"25955"	"25936"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.3"	""	"49.8"	""	"54.4"	""	"61.8"	""	"86.4"	"88.9"	""	"753"	"36"	"35.000"	"28.000"	"0.0093705478033332"	"20"	"9.9E-05"	"0.0008114"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9697"	"0.0000"	"1"	"1"	"1"	"858.93524"	"1716.86321"	"1716.86420"	"-0.58"	"-0.00049"	"12/118"	"12"	"118"	"527660.164978027"	"HCD"	"MS2"	"0"	"28.1"	"100.000"	"76.1012"	"25914"	"25914"	"25893"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.4"	""	"30.0"	""	"43.8"	""	"42.7"	""	"48.1"	"50.2"	""	"754"	"66"	"35.000"	"28.000"	"9.75756269012715E-06"	"19"	"0"	"5.745E-06"	"0.909"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"572.95935"	"1716.86350"	"1716.86420"	"-0.41"	"-0.00023"	"14/118"	"14"	"118"	"3373147.30285645"	"HCD"	"MS2"	"21.42419"	"38.5"	"100.000"	"76.2773"	"26017"	"26017"	"25998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.9"	""	"45.9"	""	"43.0"	""	"65.4"	""	"73.6"	"79.1"	""	"754"	"45"	"35.000"	"28.000"	"0.00108978631565178"	"25"	"0"	"8.692E-06"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.93561"	"1716.86394"	"1716.86420"	"-0.15"	"-0.00013"	"12/118"	"12"	"118"	"179320.53704834"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"77.0974"	"26348"	"26348"	"26334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"16.8"	""	"15.0"	""	"17.7"	""	"22.8"	"25.5"	""	"760"	"27"	"35.000"	"28.000"	"0.0754716068595801"	"14"	"0.0001991"	"0.003615"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8361"	"0.0000"	"1"	"1"	"1"	"572.95953"	"1716.86405"	"1716.86420"	"-0.09"	"-0.00005"	"15/118"	"15"	"118"	"11379042.7610474"	"HCD"	"MS2"	"2.18862"	"38.5"	"76.774"	"76.5025"	"26078"	"26078"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.9"	""	"43.9"	""	"52.4"	""	"56.1"	"0.1"	"76.1"	"78.2"	""	"759"	"61"	"35.000"	"28.000"	"3.36675706568406E-05"	"26"	"0"	"1.067E-06"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"858.93585"	"1716.86443"	"1716.86420"	"0.13"	"0.00012"	"11/118"	"11"	"118"	"779098.600585938"	"HCD"	"MS2"	"0"	"37.9"	"100.000"	"76.2149"	"25992"	"25992"	"25973"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.4"	""	"46.1"	""	"51.1"	""	"54.0"	""	"77.3"	"72.0"	""	"761"	"75"	"35.000"	"28.000"	"1.11520487981775E-06"	"22"	"0"	"6.152E-07"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"858.93585"	"1716.86443"	"1716.86420"	"0.13"	"0.00012"	"12/118"	"12"	"118"	"3710357.89624023"	"HCD"	"MS2"	"0"	"162.8"	"100.000"	"76.6868"	"26153"	"26153"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"274.3"	""	"177.3"	""	"201.6"	""	"241.7"	"3.6"	"318.6"	"326.3"	""	"761"	"70"	"35.000"	"28.000"	"3.68429724307405E-06"	"21"	"0"	"6.978E-08"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"858.93591"	"1716.86455"	"1716.86420"	"0.21"	"0.00018"	"11/118"	"11"	"118"	"3759584.57336426"	"HCD"	"MS2"	"0"	"90.7"	"100.000"	"76.7730"	"26219"	"26219"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.3"	""	"95.4"	""	"114.4"	""	"146.2"	""	"177.2"	"183.3"	""	"763"	"74"	"35.000"	"28.000"	"1.56132941686999E-06"	"21"	"0"	"1.155E-06"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9429"	"0.0000"	"1"	"1"	"1"	"858.93591"	"1716.86455"	"1716.86420"	"0.21"	"0.00018"	"12/118"	"12"	"118"	"7013442.83807373"	"HCD"	"MS2"	"0"	"277.5"	"100.000"	"76.3919"	"26033"	"26033"	"26016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"487.8"	""	"300.6"	""	"350.3"	""	"426.6"	""	"519.8"	"545.4"	""	"763"	"70"	"35.000"	"28.000"	"3.77133005611622E-06"	"21"	"0"	"9.344E-07"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"572.95972"	"1716.86460"	"1716.86420"	"0.23"	"0.00013"	"15/118"	"15"	"118"	"11457050.2570801"	"HCD"	"MS2"	"2.035769"	"42.6"	"86.936"	"76.5726"	"26138"	"26138"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.2"	""	"51.5"	""	"55.0"	""	"67.5"	""	"86.4"	"81.4"	""	"768"	"59"	"35.000"	"28.000"	"4.65941318578551E-05"	"24"	"0"	"3.206E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTPSYVAFTDTER"	"[R].tTPSYVAFTDTER.[L]"	"N-Term(TMT6plex)"	"2"	"4"	"P63018; P0DMW0"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1;Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1"	"P55063; P63018; P0DMW0; P14659"	"Heat shock 70 kDa protein 1-like OS=Rattus norvegicus OX=10116 GN=Hspa1l PE=2 SV=2; Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1; Heat shock 70 kDa protein 1A OS=Rattus norvegicus OX=10116 GN=Hspa1a PE=2 SV=1; Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus OX=10116 GN=Hspa2 PE=1 SV=2"	"0"	"2"	"2"	"0.9324"	"0.0000"	"1"	"1"	"1"	"858.93610"	"1716.86492"	"1716.86420"	"0.42"	"0.00036"	"12/118"	"12"	"118"	"7227157.30950928"	"HCD"	"MS2"	"0"	"294.3"	"100.000"	"76.4943"	"26106"	"26106"	"26090"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"502.5"	""	"324.1"	""	"377.0"	""	"437.6"	"1.1"	"556.3"	"590.7"	""	"768"	"74"	"35.000"	"28.000"	"1.70738406708138E-06"	"22"	"0"	"2.111E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADK"	"[K].sLNPQLGTDADk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.9250"	"0.0000"	"1"	"1"	"1"	"858.97864"	"1716.95000"	"1716.95323"	"-1.88"	"-0.00162"	"12/126"	"12"	"126"	"164669.612365723"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"65.2248"	"21535"	"21535"	"21505"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.0"	""	"9.1"	""	"12.1"	""	"15.6"	""	"23.6"	"20.9"	""	"1012"	"40"	"37.000"	"30.000"	"0.00485456719547062"	"18"	"0"	"0.0002305"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADK"	"[K].sLNPQLGTDADk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"858.97986"	"1716.95244"	"1716.95323"	"-0.46"	"-0.00040"	"14/126"	"14"	"126"	"229842.44909668"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"65.5208"	"21622"	"21622"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"19.2"	""	"18.3"	""	"26.5"	""	"42.0"	"35.0"	""	"1002"	"39"	"36.000"	"30.000"	"0.00614947054810362"	"21"	"0"	"9.831E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADK"	"[K].sLNPQLGTDADk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"572.98901"	"1716.95249"	"1716.95323"	"-0.44"	"-0.00025"	"12/126"	"12"	"126"	"2037673.54400635"	"HCD"	"MS2"	"43.35276"	"60.5"	"100.000"	"65.2848"	"21559"	"21559"	"21536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.3"	""	"68.6"	""	"73.6"	""	"104.9"	"1.2"	"131.2"	"123.1"	""	"1002"	"31"	"36.000"	"30.000"	"0.0359614939926952"	"14"	"0"	"3.126E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADK"	"[K].sLNPQLGTDADk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"858.98041"	"1716.95354"	"1716.95323"	"0.18"	"0.00015"	"13/126"	"13"	"126"	"190607.048095703"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"65.5636"	"21673"	"21673"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"18.9"	""	"17.8"	""	"27.2"	"0.6"	"38.9"	"34.2"	""	"977"	"55"	"36.000"	"29.000"	"0.000140237631431906"	"25"	"0"	"8.508E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLNPQLGTDADK"	"[K].sLNPQLGTDADk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"P04642"	"L-lactate dehydrogenase A chain OS=Rattus norvegicus OX=10116 GN=Ldha PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.98071"	"1716.95415"	"1716.95323"	"0.53"	"0.00046"	"9/126"	"9"	"126"	"163238.847869873"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"65.2192"	"21499"	"21499"	"21473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"14.2"	""	"16.4"	""	"20.7"	""	"29.0"	"31.9"	""	"991"	"19"	"36.000"	"29.000"	"0.695094190610449"	"14"	"0.003568"	"0.03954"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGPDAETLLK"	"[R].dLSGPDAETLLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.8214"	"0.0000"	"1"	"1"	"1"	"858.99280"	"1716.97832"	"1716.97839"	"-0.04"	"-0.00003"	"10/104"	"10"	"104"	"304686.217407227"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"101.8052"	"36296"	"36296"	"36278"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.5"	""	"32.3"	""	"36.5"	""	"42.7"	"0.5"	"38.1"	"44.8"	""	"952"	"56"	"36.000"	"29.000"	"0.000118742709002485"	"26"	"0"	"1.366E-05"	"0.832"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGPDAETLLK"	"[R].dLSGPDAETLLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"858.99298"	"1716.97869"	"1716.97839"	"0.17"	"0.00015"	"10/104"	"10"	"104"	"253897.129272461"	"HCD"	"MS2"	"0"	"20.2"	"100.000"	"102.0033"	"36401"	"36401"	"36382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.2"	""	"25.9"	""	"30.9"	""	"25.6"	""	"34.6"	"36.3"	""	"918"	"52"	"36.000"	"29.000"	"0.000284978886711599"	"23"	"0"	"1.434E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGPDAETLLK"	"[R].dLSGPDAETLLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.7750"	"0.0000"	"1"	"1"	"1"	"858.99335"	"1716.97942"	"1716.97839"	"0.60"	"0.00052"	"8/104"	"8"	"104"	"266070.885009766"	"HCD"	"MS2"	"100"	"23.1"	"100.000"	"101.7012"	"36280"	"36280"	"36256"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.0"	""	"32.1"	""	"34.8"	""	"41.8"	""	"38.9"	"35.4"	""	"922"	"40"	"36.000"	"29.000"	"0.00514873957226838"	"24"	"9.9E-05"	"0.0008042"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLSGPDAETLLK"	"[R].dLSGPDAETLLk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"858.99377"	"1716.98027"	"1716.97839"	"1.10"	"0.00094"	"8/104"	"8"	"104"	"231658.560852051"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"101.5099"	"36177"	"36177"	"36150"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.3"	""	"29.0"	""	"28.0"	""	"28.6"	""	"36.2"	"29.4"	""	"925"	"46"	"36.000"	"29.000"	"0.00109676033886852"	"16"	"0"	"0.0002017"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQTLNNVK"	"[R].eLAEQTLNNVk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"573.00116"	"1716.98893"	"1716.98962"	"-0.40"	"-0.00023"	"10/102"	"10"	"102"	"671057.426940918"	"HCD"	"MS2"	"30.33129"	"24.8"	"100.000"	"80.9605"	"27885"	"27885"	"27859"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"27.5"	""	"28.8"	""	"39.7"	""	"52.0"	"56.6"	""	"880"	"19"	"36.000"	"29.000"	"0.528996351231662"	"24"	"0.0009352"	"0.008413"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAEQTLNNVK"	"[R].eLAEQTLNNVk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"Q641Y8"	"ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1"	"0"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"573.00171"	"1716.99057"	"1716.98962"	"0.56"	"0.00032"	"9/102"	"9"	"102"	"635494.790283203"	"HCD"	"MS2"	"33.80502"	"23.6"	"100.000"	"81.0503"	"27948"	"27948"	"27929"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"25.3"	""	"33.7"	""	"40.7"	"2.2"	"50.3"	"40.9"	""	"888"	"12"	"36.000"	"29.000"	"3.07172951088007"	"23"	"0.0005161"	"0.006806"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gmEELIPLVNk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.8421"	"0.0000"	"1"	"1"	"3"	"573.00360"	"1716.99625"	"1716.99701"	"-0.45"	"-0.00025"	"9/84"	"9"	"84"	"307117.104003906"	"HCD"	"MS2"	"16.34059"	"10.0"	"100.000"	"104.2280"	"37273"	"37273"	"37249"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.4"	""	"9.7"	""	"16.2"	""	"22.7"	""	"18.3"	"17.6"	""	"884"	"19"	"36.000"	"29.000"	"0.537554212285695"	"16"	"0.0001991"	"0.002772"	"0.357"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GMEELIPLVNK"	"[R].gmEELIPLVNk.[L]"	"N-Term(TMT6plex); M2(Oxidation); K11(TMT6plex)"	"1"	"1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"P39052"	"Dynamin-2 OS=Rattus norvegicus OX=10116 GN=Dnm2 PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"573.00409"	"1716.99771"	"1716.99701"	"0.41"	"0.00023"	"8/84"	"8"	"84"	"319017.027893066"	"HCD"	"MS2"	"38.20742"	"10.3"	"100.000"	"104.4564"	"37382"	"37382"	"37359"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"13.7"	""	"18.3"	""	"16.1"	""	"19.6"	"19.6"	""	"859"	"20"	"36.000"	"29.000"	"0.399910832513433"	"15"	"0.0001991"	"0.002501"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGYIFGDYIER"	"[K].eQGYIFGDYIER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"859.93188"	"1718.85649"	"1718.85872"	"-1.29"	"-0.00111"	"7/128"	"7"	"128"	"138570.514404297"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"104.2166"	"37268"	"37268"	"37249"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"12.6"	""	"15.7"	""	"17.1"	""	"17.9"	"17.4"	""	"778"	"26"	"35.000"	"28.000"	"0.098843838245868"	"18"	"0.0001991"	"0.003105"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSSPTDNLELSAR"	"[K].sLSSPTDNLELSAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"859.95972"	"1718.91216"	"1718.91221"	"-0.03"	"-0.00003"	"5/138"	"5"	"138"	"100760.921142578"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"79.9121"	"27486"	"27486"	"27461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"8.0"	""	"8.1"	""	"8.6"	""	"15.2"	"13.8"	""	"1047"	"24"	"37.000"	"30.000"	"0.203196716596104"	"25"	"9.9E-05"	"0.0009596"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSSPTDNLELSAR"	"[K].sLSSPTDNLELSAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"859.95984"	"1718.91240"	"1718.91221"	"0.11"	"0.00010"	"15/138"	"15"	"138"	"145980.756286621"	"HCD"	"MS2"	"13.16561"	"9.8"	"100.000"	"79.6100"	"27363"	"27363"	"27334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.2"	""	"12.3"	""	"13.3"	""	"17.3"	""	"20.4"	"19.1"	""	"1044"	"41"	"37.000"	"30.000"	"0.00459907511710183"	"22"	"0"	"0.0001249"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSSPTDNLELSAR"	"[K].sLSSPTDNLELSAR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"859.96039"	"1718.91350"	"1718.91221"	"0.75"	"0.00065"	"7/138"	"7"	"138"	"184164.941894531"	"HCD"	"MS2"	"10.00865"	"11.3"	"100.000"	"79.5183"	"27298"	"27298"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"13.7"	""	"14.0"	""	"21.8"	""	"20.9"	"25.4"	""	"1050"	"38"	"37.000"	"30.000"	"0.00796451442916152"	"18"	"0"	"0.0001495"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVSPSPETETAK"	"[K].dVSPSPETETAk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"859.96460"	"1718.92192"	"1718.92127"	"0.38"	"0.00033"	"9/106"	"9"	"106"	"137180.022888184"	"HCD"	"MS2"	"100"	"8.5"	"100.000"	"43.7570"	"12787"	"12787"	"12761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"5.5"	""	"7.1"	""	"22.1"	""	"21.2"	"18.3"	""	"1079"	"28"	"37.000"	"30.000"	"0.0839443458250937"	"17"	"0.0001991"	"0.003169"	"0.345"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGNIPAGTTVDTK"	"[K].sGNIPAGTTVDTk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"Q9QZ81"	"Protein argonaute-2 OS=Rattus norvegicus OX=10116 GN=Ago2 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"859.98816"	"1718.96904"	"1718.96888"	"0.09"	"0.00008"	"4/138"	"4"	"138"	"88572.7081298828"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"50.1167"	"15367"	"15367"	"15340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"7.0"	""	"8.3"	""	"11.3"	""	"10.3"	"11.1"	""	"1043"	"12"	"37.000"	"30.000"	"3.42179756376965"	"14"	"0.006267"	"0.07738"	"0.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTMER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"574.30035"	"1720.88651"	"1720.88897"	"-1.43"	"-0.00082"	"8/118"	"8"	"118"	"1612993.34631348"	"HCD"	"MS2"	"6.787657"	"20.6"	"100.000"	"79.0270"	"27125"	"27125"	"27102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.5"	""	"23.7"	""	"27.0"	""	"38.8"	""	"42.7"	"36.9"	""	"945"	"42"	"36.000"	"29.000"	"0.00312897297999082"	"17"	"0"	"3.418E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTMER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"574.30042"	"1720.88669"	"1720.88897"	"-1.32"	"-0.00076"	"9/118"	"9"	"118"	"1563443.69171143"	"HCD"	"MS2"	"8.897364"	"22.7"	"100.000"	"78.8958"	"27045"	"27045"	"27024"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.8"	""	"27.5"	""	"31.5"	""	"39.8"	""	"43.7"	"45.5"	""	"945"	"41"	"36.000"	"29.000"	"0.00366776762607056"	"16"	"0"	"3.124E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTMER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"574.30090"	"1720.88816"	"1720.88897"	"-0.47"	"-0.00027"	"9/118"	"9"	"118"	"1698331.85443115"	"HCD"	"MS2"	"11.92224"	"21.4"	"100.000"	"78.7275"	"27003"	"27003"	"26983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"23.0"	""	"24.8"	""	"35.0"	"0.7"	"48.4"	"47.2"	""	"958"	"46"	"36.000"	"29.000"	"0.00117580557061313"	"18"	"0"	"4.88E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTMER.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"574.30103"	"1720.88852"	"1720.88897"	"-0.26"	"-0.00015"	"8/118"	"8"	"118"	"1659459.16210938"	"HCD"	"MS2"	"13.34235"	"22.9"	"100.000"	"78.5936"	"26922"	"26922"	"26897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.6"	""	"25.4"	""	"28.8"	""	"37.2"	""	"44.8"	"51.6"	""	"961"	"46"	"36.000"	"29.000"	"0.00127553797252925"	"18"	"0"	"2.463E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALINATGEEVAMR"	"[R].tALINATGEEVAmR.[K]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.95807"	"1720.90886"	"1720.91010"	"-0.72"	"-0.00062"	"6/140"	"6"	"140"	"99139.1363525391"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"72.1187"	"24327"	"24327"	"24298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.8"	""	"3.8"	""	"4.8"	""	"10.3"	""	"11.3"	"9.0"	""	"1085"	"20"	"37.000"	"30.000"	"0.520474842597394"	"14"	"9.9E-05"	"0.0006223"	"0.49"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALINATGEEVAMR"	"[R].tALINATGEEVAmR.[K]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"3"	"860.95874"	"1720.91020"	"1720.91010"	"0.06"	"0.00005"	"5/140"	"5"	"140"	"98849.3166503906"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"72.2916"	"24367"	"24367"	"24336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.5"	""	"2.5"	""	"4.1"	""	"9.3"	""	"8.8"	"7.0"	""	"1081"	"10"	"37.000"	"30.000"	"5.02106332054555"	"16"	"0.0001991"	"0.00335"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TALINATGEEVAMR"	"[R].tALINATGEEVAmR.[K]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.95880"	"1720.91033"	"1720.91010"	"0.13"	"0.00011"	"4/140"	"4"	"140"	"74920.8768310547"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"71.9526"	"24233"	"24233"	"24207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"3.5"	""	"6.3"	""	"12.1"	""	"8.7"	"11.7"	""	"1080"	"13"	"37.000"	"30.000"	"2.98809058976498"	"13"	"0.003704"	"0.04004"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"860.98047"	"1720.95366"	"1720.95554"	"-1.09"	"-0.00094"	"8/102"	"8"	"102"	"235300.569580078"	"HCD"	"MS2"	"25.19135"	"20.8"	"100.000"	"76.6706"	"26146"	"26146"	"26120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"24.9"	""	"20.2"	""	"46.5"	"0.5"	"46.0"	"38.5"	""	"1113"	"32"	"37.000"	"30.000"	"0.0353561663575496"	"14"	"0.0001991"	"0.004555"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8136"	"0.0000"	"1"	"1"	"1"	"860.98083"	"1720.95439"	"1720.95554"	"-0.67"	"-0.00058"	"10/102"	"10"	"102"	"172651.586181641"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"76.0388"	"25889"	"25889"	"25865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"10.5"	""	"15.2"	""	"37.9"	""	"29.1"	"31.5"	""	"1123"	"59"	"37.000"	"30.000"	"7.78663397911566E-05"	"27"	"0"	"0.0002599"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"860.98090"	"1720.95452"	"1720.95554"	"-0.60"	"-0.00051"	"9/102"	"9"	"102"	"172924.505004883"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"75.7046"	"25753"	"25753"	"25735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"12.7"	""	"12.1"	""	"30.8"	""	"26.9"	"28.5"	""	"1122"	"40"	"37.000"	"30.000"	"0.00598360424010175"	"20"	"9.9E-05"	"0.0006174"	"0.491"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"860.98132"	"1720.95537"	"1720.95554"	"-0.10"	"-0.00009"	"10/102"	"10"	"102"	"203539.387207031"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"76.1504"	"25966"	"25966"	"25943"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.2"	""	"21.2"	""	"16.6"	""	"34.4"	""	"32.1"	"27.7"	""	"1125"	"48"	"37.000"	"30.000"	"0.000826271031174676"	"23"	"0"	"0.0002191"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIQEEMEALVK"	"[K].gIQEEmEALVk.[D]"	"N-Term(TMT6plex); M6(Oxidation); K11(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"860.98193"	"1720.95659"	"1720.95554"	"0.61"	"0.00052"	"11/102"	"11"	"102"	"140982.502624512"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"75.7978"	"25823"	"25823"	"25793"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.9"	""	"12.7"	""	"7.9"	""	"30.7"	""	"20.0"	"19.3"	""	"1125"	"35"	"37.000"	"30.000"	"0.0195489090811803"	"20"	"9.9E-05"	"0.000777"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9531"	"0.0000"	"1"	"1"	"1"	"574.62640"	"1721.86466"	"1721.86559"	"-0.54"	"-0.00031"	"15/122"	"15"	"122"	"931507.723754883"	"HCD"	"MS2"	"20.56626"	"15.5"	"100.000"	"83.7499"	"29039"	"29039"	"29018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"12.8"	""	"22.5"	""	"29.1"	""	"33.1"	"28.1"	""	"862"	"64"	"36.000"	"29.000"	"1.91195325534447E-05"	"20"	"0"	"4.344E-06"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.43616"	"1721.86504"	"1721.86559"	"-0.32"	"-0.00028"	"6/122"	"6"	"122"	"132712.80078125"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"83.6468"	"28969"	"28969"	"28945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"11.1"	""	"8.6"	""	"18.9"	""	"27.3"	"16.0"	""	"863"	"17"	"36.000"	"29.000"	"0.833644328792802"	"14"	"0.00307"	"0.03392"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"861.43622"	"1721.86516"	"1721.86559"	"-0.25"	"-0.00022"	"9/122"	"9"	"122"	"565669.021118164"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"83.9537"	"29092"	"29092"	"29076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.1"	""	"38.6"	""	"22.2"	""	"86.7"	"0.5"	"65.1"	"52.0"	""	"863"	"49"	"36.000"	"29.000"	"0.000502320381690626"	"19"	"0"	"3.033E-06"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"574.62659"	"1721.86521"	"1721.86559"	"-0.22"	"-0.00013"	"15/122"	"15"	"122"	"1764503.41705322"	"HCD"	"MS2"	"6.471139"	"18.8"	"100.000"	"83.9514"	"29091"	"29091"	"29076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.1"	""	"22.1"	""	"15.2"	""	"43.4"	""	"40.1"	"32.4"	""	"863"	"65"	"36.000"	"29.000"	"1.22456206077253E-05"	"21"	"0"	"1.417E-06"	"1.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8529"	"0.0000"	"1"	"1"	"1"	"574.62665"	"1721.86539"	"1721.86559"	"-0.12"	"-0.00007"	"15/122"	"15"	"122"	"568150.67956543"	"HCD"	"MS2"	"39.82409"	"12.3"	"100.000"	"83.6656"	"28976"	"28976"	"28957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.8"	""	"13.8"	""	"12.3"	""	"21.9"	""	"26.3"	"21.9"	""	"859"	"68"	"36.000"	"29.000"	"6.7758404033587E-06"	"26"	"0"	"2.835E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"574.62671"	"1721.86557"	"1721.86559"	"-0.01"	"-0.00001"	"13/122"	"13"	"122"	"1396406.58227539"	"HCD"	"MS2"	"7.979429"	"17.2"	"100.000"	"84.0501"	"29160"	"29160"	"29140"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"20.6"	""	"23.0"	""	"31.9"	""	"39.4"	"27.2"	""	"859"	"67"	"36.000"	"29.000"	"8.12761584208016E-06"	"20"	"0"	"7.471E-07"	"1.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"861.43677"	"1721.86626"	"1721.86559"	"0.39"	"0.00033"	"5/122"	"5"	"122"	"100632.561035156"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"84.2630"	"29218"	"29218"	"29194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"8.6"	""	"7.3"	""	"14.8"	""	"12.2"	"10.1"	""	"878"	"30"	"36.000"	"29.000"	"0.042605387562077"	"20"	"0"	"0.0003062"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9245"	"0.0000"	"1"	"1"	"1"	"861.43695"	"1721.86662"	"1721.86559"	"0.60"	"0.00052"	"9/122"	"9"	"122"	"528790.40838623"	"HCD"	"MS2"	"0"	"30.9"	"100.000"	"83.9805"	"29132"	"29132"	"29114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.5"	""	"29.4"	""	"27.3"	""	"74.5"	"0.6"	"64.2"	"52.8"	""	"880"	"53"	"36.000"	"29.000"	"0.00024403531370148"	"20"	"0"	"3.952E-07"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLIDEANQDFTNR"	"[K].gLIDEANQDFTNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"861.43756"	"1721.86785"	"1721.86559"	"1.31"	"0.00113"	"7/122"	"7"	"122"	"149303.929321289"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"83.6761"	"29009"	"29009"	"28988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"7.8"	""	"9.0"	""	"28.6"	""	"24.3"	"12.8"	""	"903"	"38"	"36.000"	"29.000"	"0.00718882240263603"	"19"	"0"	"5.219E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELSQVKVIDMTGR"	"[K].eLSqVKVIDmTGR.[E]"	"N-Term(TMT6plex); Q4(Deamidated); M10(Oxidation)"	"1"	"1"	"Q5U2Y6"	"Tuftelin-interacting protein 11 OS=Rattus norvegicus OX=10116 GN=Tfip11 PE=1 SV=1"	"Q5U2Y6"	"Tuftelin-interacting protein 11 OS=Rattus norvegicus OX=10116 GN=Tfip11 PE=1 SV=1"	"1"	"2"	"2"	"0.4000"	"0.0000"	"1"	"1"	"1"	"861.46759"	"1721.92790"	"1721.93050"	"-1.51"	"-0.00130"	"4/134"	"4"	"134"	"189865.373168945"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"81.7743"	"28242"	"28242"	"28216"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"11.3"	""	"12.7"	""	"16.1"	""	"15.0"	"20.5"	""	"1114"	"15"	"37.000"	"30.000"	"1.63250753760443"	"22"	"0.009781"	"0.1307"	"0.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMMAK"	"[R].dNSTMGYmMAk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.3571"	"0.0000"	"1"	"1"	"1"	"861.91626"	"1722.82524"	"1722.82652"	"-0.74"	"-0.00064"	"8/104"	"8"	"104"	"110603.512207031"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"60.1814"	"19489"	"19489"	"19461"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.2"	""	"12.5"	""	"18.5"	""	"8.5"	""	"15.1"	"17.6"	""	"602"	"14"	"34.000"	"27.000"	"1.1364922946855"	"13"	"0.003786"	"0.04096"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMMAK"	"[R].dNSTMGYMmAk.[K]"	"N-Term(TMT6plex); M9(Oxidation); K11(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.91718"	"1722.82707"	"1722.82652"	"0.32"	"0.00028"	"4/104"	"4"	"104"	"110274.484802246"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"60.2736"	"19493"	"19493"	"19464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"18.9"	""	"15.5"	""	"11.3"	""	"13.6"	"18.6"	""	"630"	"7"	"34.000"	"27.000"	"6.28507629215197"	"13"	"0.003043"	"0.03281"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMMAK"	"[R].dNSTMGYmMAk.[K]"	"N-Term(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"861.91718"	"1722.82707"	"1722.82652"	"0.32"	"0.00028"	"4/104"	"4"	"104"	"110274.484802246"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"60.2736"	"19493"	"19493"	"19464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"18.9"	""	"15.5"	""	"11.3"	""	"13.6"	"18.6"	""	"630"	"7"	"34.000"	"27.000"	"6.28507629215197"	"13"	"0.003043"	"0.03281"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNSTMGYMMAK"	"[R].dNSTmGYMMAk.[K]"	"N-Term(TMT6plex); M5(Oxidation); K11(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"3"	"3"	"861.91718"	"1722.82707"	"1722.82652"	"0.32"	"0.00028"	"4/104"	"4"	"104"	"110274.484802246"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"60.2736"	"19493"	"19493"	"19464"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"18.9"	""	"15.5"	""	"11.3"	""	"13.6"	"18.6"	""	"630"	"7"	"34.000"	"27.000"	"6.28507629215197"	"13"	"0.003043"	"0.03281"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSANEDNVTQVR"	"[R].fNSANEDNVTQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.93103"	"1722.85478"	"1722.86084"	"-3.52"	"-0.00303"	"13/132"	"13"	"132"	"213266.41418457"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"50.1460"	"15414"	"15414"	"15387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.6"	""	"17.3"	""	"17.1"	""	"24.6"	"1.6"	"27.7"	"28.8"	""	"810"	"43"	"36.000"	"29.000"	"0.00207231143393825"	"15"	"0"	"1.548E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FNSANEDNVTQVR"	"[R].fNSANEDNVTQVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"861.93341"	"1722.85954"	"1722.86084"	"-0.75"	"-0.00065"	"8/132"	"8"	"132"	"183792.331176758"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"50.5335"	"15537"	"15537"	"15510"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"21.0"	""	"13.0"	""	"23.7"	""	"28.8"	"26.5"	""	"853"	"34"	"36.000"	"29.000"	"0.0176570861310615"	"19"	"0"	"5.499E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"861.93512"	"1722.86296"	"1722.87161"	"-5.02"	"-0.00432"	"7/124"	"7"	"124"	"138397.145935059"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"79.1745"	"27159"	"27159"	"27128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"12.4"	""	"9.7"	""	"13.7"	""	"12.0"	"14.0"	""	"880"	"45"	"36.000"	"29.000"	"0.00137864571869886"	"18"	"0.0001686"	"0.00147"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQMTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.4565"	"0.0000"	"1"	"1"	"1"	"574.96155"	"1722.87009"	"1722.87161"	"-0.88"	"-0.00051"	"12/124"	"12"	"124"	"284520.957946777"	"HCD"	"MS2"	"10.23535"	"9.4"	"100.000"	"91.7777"	"32274"	"32274"	"32251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"9.2"	""	"13.6"	""	"17.4"	""	"16.8"	"17.9"	""	"921"	"46"	"36.000"	"29.000"	"0.00103568964598738"	"27"	"0"	"2.365E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQMTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4400"	"0.0000"	"1"	"1"	"1"	"861.93964"	"1722.87200"	"1722.87161"	"0.23"	"0.00019"	"12/124"	"12"	"124"	"107718.96673584"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"91.7322"	"32220"	"32220"	"32196"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"9.5"	""	"8.4"	""	"6.6"	""	"12.0"	"10.5"	""	"928"	"25"	"36.000"	"29.000"	"0.159044252957553"	"17"	"0.002189"	"0.02018"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQMTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.5758"	"0.0000"	"1"	"1"	"1"	"574.96240"	"1722.87265"	"1722.87161"	"0.61"	"0.00035"	"13/124"	"13"	"124"	"325281.540649414"	"HCD"	"MS2"	"10.113"	"9.8"	"100.000"	"91.8823"	"32281"	"32281"	"32256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"10.5"	""	"13.6"	""	"15.4"	""	"18.3"	"20.5"	""	"923"	"33"	"36.000"	"29.000"	"0.0231297908318986"	"15"	"0"	"6.947E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"861.94025"	"1722.87322"	"1722.87161"	"0.93"	"0.00080"	"7/124"	"7"	"124"	"139187.798828125"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"79.2757"	"27227"	"27227"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"14.1"	""	"14.2"	""	"9.4"	""	"12.6"	"11.0"	""	"917"	"10"	"36.000"	"29.000"	"4.39885189550056"	"13"	"0.002035"	"0.01765"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"861.99170"	"1722.97612"	"1722.97906"	"-1.70"	"-0.00147"	"6/96"	"6"	"96"	"72962.8911743164"	"HCD"	"MS2"	"23.14005"	"4.2"	"100.000"	"59.7299"	"19272"	"19272"	"19244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.8"	""	"3.3"	""	"6.4"	""	"7.4"	""	"6.5"	"9.5"	""	"985"	"14"	"36.000"	"29.000"	"2.15976368654181"	"17"	"0.006033"	"0.07384"	"0.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"574.99762"	"1722.97831"	"1722.97906"	"-0.44"	"-0.00025"	"9/96"	"9"	"96"	"2727168.23840332"	"HCD"	"MS2"	"16.47715"	"79.3"	"100.000"	"59.2443"	"19109"	"19109"	"19089"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.7"	""	"101.9"	""	"100.7"	""	"134.3"	""	"153.7"	"145.2"	""	"981"	"27"	"36.000"	"29.000"	"0.104385220205452"	"16"	"0"	"2.81E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"574.99762"	"1722.97831"	"1722.97906"	"-0.44"	"-0.00025"	"8/96"	"8"	"96"	"18697002.4985962"	"HCD"	"MS2"	"4.792752"	"268.4"	"62.315"	"59.6979"	"19259"	"19259"	"19244"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"416.9"	""	"299.7"	""	"365.0"	""	"456.6"	"0.3"	"484.3"	"520.4"	""	"981"	"47"	"36.000"	"29.000"	"0.00109053350136451"	"25"	"0"	"3.009E-06"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"574.99774"	"1722.97867"	"1722.97906"	"-0.22"	"-0.00013"	"11/96"	"11"	"96"	"3152397.25634766"	"HCD"	"MS2"	"12.12284"	"87.1"	"100.000"	"59.4216"	"19146"	"19146"	"19130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"134.3"	"2.0"	"107.2"	""	"108.8"	""	"153.5"	"0.6"	"157.7"	"160.7"	""	"981"	"33"	"36.000"	"29.000"	"0.0232080692520606"	"21"	"0"	"1.123E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"574.99774"	"1722.97867"	"1722.97906"	"-0.22"	"-0.00013"	"10/96"	"10"	"96"	"5443578.75976563"	"HCD"	"MS2"	"0"	"138.9"	"100.000"	"59.8222"	"19343"	"19343"	"19327"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.0"	""	"159.9"	""	"175.7"	""	"232.9"	"0.6"	"291.7"	"282.9"	""	"981"	"16"	"36.000"	"29.000"	"1.32934899544246"	"17"	"0.0001991"	"0.002552"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"0.6600"	"0.0000"	"1"	"1"	"1"	"574.99805"	"1722.97959"	"1722.97906"	"0.31"	"0.00018"	"8/96"	"8"	"96"	"16918396.9251709"	"HCD"	"MS2"	"5.628284"	"279.8"	"73.608"	"59.5391"	"19228"	"19228"	"19217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"439.4"	""	"317.8"	""	"355.6"	""	"484.6"	"0.6"	"509.4"	"544.2"	""	"975"	"50"	"36.000"	"29.000"	"0.0004931449839517"	""	"0"	"2.431E-06"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ISSDLDGHPVPK"	"[K].iSSDLDGHPVPk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"861.99390"	"1722.98052"	"1722.97906"	"0.85"	"0.00073"	"4/96"	"4"	"96"	"66402.321472168"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"59.4744"	"19202"	"19202"	"19183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.5"	""	""	""	"4.1"	""	"7.7"	""	"6.3"	"5.7"	""	"952"	"7"	"36.000"	"29.000"	"8.82281052745451"	"15"	"0.00856"	"0.1089"	"0.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEELMEK"	"[R].ekEELMEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"575.00189"	"1722.99112"	"1722.99148"	"-0.21"	"-0.00012"	"9/80"	"9"	"80"	"4671237.67242432"	"HCD"	"MS2"	"8.298902"	"277.9"	"100.000"	"53.4329"	"16715"	"16715"	"16698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"498.4"	""	"282.8"	""	"325.2"	""	"315.6"	""	"587.0"	"629.5"	""	"899"	"16"	"36.000"	"29.000"	"1.15008435616409"	"21"	"0.006343"	"0.07941"	"0.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEELMEK"	"[R].ekEELMEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"575.00189"	"1722.99112"	"1722.99148"	"-0.21"	"-0.00012"	"5/80"	"5"	"80"	"7901974.47869873"	"HCD"	"MS2"	"12.59233"	"476.3"	"100.000"	"53.1265"	"16589"	"16589"	"16570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"954.2"	""	"495.9"	""	"533.0"	""	"565.3"	""	"979.7"	"990.3"	""	"899"	"9"	"36.000"	"29.000"	"5.29333885097603"	"18"	"0.006777"	"0.08387"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEELMEK"	"[R].ekEELMEk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"575.00208"	"1722.99167"	"1722.99148"	"0.11"	"0.00006"	"9/80"	"9"	"80"	"8715129.85205078"	"HCD"	"MS2"	"9.318604"	"513.5"	"100.000"	"52.8208"	"16499"	"16499"	"16482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"1021.1"	""	"543.8"	""	"566.3"	""	"586.7"	""	"1050.5"	"1108.7"	""	"891"	"15"	"36.000"	"29.000"	"1.44160974162149"	"19"	"0.001827"	"0.01534"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"3"	"3"	"0.4737"	"0.0000"	"1"	"1"	"1"	"575.32397"	"1723.95737"	"1723.96307"	"-3.31"	"-0.00190"	"8/114"	"8"	"114"	"504436.627319336"	"HCD"	"MS2"	"51.08593"	"18.9"	"100.000"	"86.0749"	"29979"	"29979"	"29951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.5"	""	"25.6"	""	"21.9"	""	"29.2"	""	"39.8"	"33.7"	""	"1020"	"19"	"37.000"	"30.000"	"0.660039879139493"	"24"	"0.001049"	"0.008796"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDSQLVVEAYK"	"[K].nDSQLVVEAYk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"3"	"3"	"0.6129"	"0.0000"	"1"	"1"	"1"	"575.32489"	"1723.96012"	"1723.96307"	"-1.71"	"-0.00098"	"9/112"	"9"	"112"	"422490.800476074"	"HCD"	"MS2"	"27.44214"	"18.0"	"100.000"	"83.5707"	"28938"	"28938"	"28921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"25.3"	""	"25.4"	""	"26.4"	""	"36.7"	"37.8"	""	"1011"	"31"	"37.000"	"30.000"	"0.0364519830726956"	"27"	"9.9E-05"	"0.001014"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDSQLVVEAYK"	"[K].nDSQLVVEAYk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"575.32507"	"1723.96067"	"1723.96307"	"-1.39"	"-0.00080"	"10/112"	"10"	"112"	"397766.945373535"	"HCD"	"MS2"	"62.12403"	"18.2"	"100.000"	"83.4153"	"28904"	"28904"	"28878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"24.1"	""	"25.1"	""	"30.7"	""	"30.7"	"37.8"	""	"1010"	"24"	"37.000"	"30.000"	"0.219427663206644"	"26"	"0.0001991"	"0.002584"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"862.48444"	"1723.96160"	"1723.96307"	"-0.86"	"-0.00074"	"12/114"	"12"	"114"	"187152.239135742"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"85.9043"	"29909"	"29909"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.2"	""	"22.2"	""	"19.8"	""	"26.6"	""	"47.3"	"28.9"	""	"1003"	"38"	"37.000"	"30.000"	"0.00869502704873701"	"18"	"0"	"0.000349"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"575.32544"	"1723.96177"	"1723.96307"	"-0.76"	"-0.00044"	"10/114"	"10"	"114"	"1741552.73614502"	"HCD"	"MS2"	"29.63232"	"41.3"	"100.000"	"85.7688"	"29825"	"29825"	"29808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.9"	""	"59.1"	""	"45.7"	""	"59.9"	""	"108.5"	"51.0"	""	"1000"	"36"	"36.000"	"30.000"	"0.0119941645950974"	"27"	"0"	"0.0003925"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"3"	"3"	"0.7105"	"0.0000"	"1"	"1"	"1"	"575.32587"	"1723.96305"	"1723.96307"	"-0.01"	"-0.00001"	"8/114"	"8"	"114"	"1847505.15142822"	"HCD"	"MS2"	"35.10416"	"42.6"	"100.000"	"85.7201"	"29835"	"29835"	"29818"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.9"	""	"57.1"	""	"59.4"	""	"58.0"	""	"104.7"	"52.2"	""	"993"	"38"	"36.000"	"29.000"	"0.00849022603942327"	"26"	"0"	"5.977E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.48547"	"1723.96367"	"1723.96307"	"0.35"	"0.00030"	"8/114"	"8"	"114"	"247929.258178711"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"85.5999"	"29786"	"29786"	"29772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.1"	""	"31.5"	""	"28.8"	""	"40.8"	""	"61.6"	"24.5"	""	"999"	"44"	"36.000"	"29.000"	"0.00195225027448305"	"16"	"0"	"2.063E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NDSQLVVEAYK"	"[K].nDSQLVVEAYk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"Q8R511"	"Formin-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fnbp1 PE=1 SV=2"	"0"	"2"	"2"	"0.6875"	"0.0000"	"1"	"1"	"1"	"862.48566"	"1723.96404"	"1723.96307"	"0.56"	"0.00048"	"4/112"	"4"	"112"	"95773.7705688477"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"83.5859"	"28973"	"28973"	"28949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"7.6"	""	"8.7"	""	"16.9"	""	"16.3"	"11.7"	""	"999"	"16"	"36.000"	"29.000"	"1.16556230210936"	"19"	"0.007178"	"0.09186"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"2"	"2"	"0.8800"	"0.0000"	"1"	"1"	"1"	"862.48608"	"1723.96489"	"1723.96307"	"1.06"	"0.00091"	"13/114"	"13"	"114"	"246958.872497559"	"HCD"	"MS2"	"0"	"24.5"	"100.000"	"85.5960"	"29756"	"29756"	"29734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"35.3"	""	"28.1"	""	"32.4"	""	"60.8"	"28.7"	""	"978"	"50"	"36.000"	"29.000"	"0.000456361353089729"	"22"	"0"	"4.635E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TNAENEFVTIK"	"[R].tNAENEFVTIk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"Q6IMF3"	"Keratin, type II cytoskeletal 1 OS=Rattus norvegicus OX=10116 GN=Krt1 PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"862.48615"	"1723.96501"	"1723.96307"	"1.13"	"0.00097"	"9/114"	"9"	"114"	"247576.958496094"	"HCD"	"MS2"	"4.269637"	"23.1"	"100.000"	"85.8865"	"29872"	"29872"	"29854"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.3"	""	"29.0"	""	"23.7"	""	"29.8"	""	"66.3"	"29.4"	""	"1022"	"56"	"37.000"	"30.000"	"0.000117063337056433"	"23"	"0"	"6.903E-06"	"0.893"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"862.93610"	"1724.86492"	"1724.86526"	"-0.20"	"-0.00017"	"7/130"	"7"	"130"	"156140.265625"	"HCD"	"MS2"	"21.71496"	"12.5"	"100.000"	"85.2459"	"29614"	"29614"	"29591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"12.0"	""	"17.0"	""	"18.5"	""	"26.2"	"24.2"	""	"890"	"28"	"36.000"	"29.000"	"0.0708532883537771"	"16"	"9.9E-05"	"0.0004467"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"862.93671"	"1724.86614"	"1724.86526"	"0.51"	"0.00044"	"6/130"	"6"	"130"	"182943.342407227"	"HCD"	"MS2"	"25.56042"	"18.3"	"100.000"	"85.5568"	"29740"	"29740"	"29719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.2"	""	"22.1"	""	"24.7"	""	"31.5"	""	"42.8"	"24.1"	""	"886"	"8"	"36.000"	"29.000"	"6.97274408958535"	"13"	"0.005832"	"0.07134"	"0.061"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGGIETIANEYSDR"	"[R].aGGIETIANEYSDR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"862.93671"	"1724.86614"	"1724.86526"	"0.51"	"0.00044"	"7/130"	"7"	"130"	"152993.805786133"	"HCD"	"MS2"	"19.93544"	"12.6"	"100.000"	"85.2383"	"29640"	"29640"	"29621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"20.0"	""	"18.7"	""	"20.1"	""	"19.0"	"27.0"	""	"886"	"24"	"36.000"	"29.000"	"0.194269099114319"	"14"	"0.0005778"	"0.00717"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"862.94733"	"1724.88738"	"1724.88957"	"-1.27"	"-0.00110"	"12/94"	"12"	"94"	"203719.896362305"	"HCD"	"MS2"	"12.52679"	"18.1"	"100.000"	"86.2737"	"30027"	"30027"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"18.1"	""	"17.8"	""	"37.1"	""	"33.3"	"33.1"	""	"982"	"46"	"36.000"	"29.000"	"0.00127667834551415"	"27"	"0"	"0.0001514"	"0.617"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"862.94757"	"1724.88786"	"1724.88957"	"-0.99"	"-0.00085"	"8/94"	"8"	"94"	"156048.210021973"	"HCD"	"MS2"	"24.62334"	"14.2"	"100.000"	"86.2247"	"30039"	"30039"	"30020"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"12.9"	""	"19.5"	""	"23.0"	""	"30.0"	"29.7"	""	"990"	"20"	"36.000"	"29.000"	"0.474903312600387"	"18"	"0.002525"	"0.02402"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"575.63452"	"1724.88901"	"1724.88957"	"-0.33"	"-0.00019"	"11/94"	"11"	"94"	"1013963.28515625"	"HCD"	"MS2"	"5.474144"	"32.9"	"100.000"	"86.7999"	"30235"	"30235"	"30222"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.9"	""	"29.3"	""	"36.0"	""	"55.3"	"0.0"	"65.6"	"76.6"	""	"984"	"38"	"36.000"	"29.000"	"0.00824071895005007"	"23"	"0.0001686"	"0.001109"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"862.94818"	"1724.88909"	"1724.88957"	"-0.28"	"-0.00024"	"11/94"	"11"	"94"	"307104.580871582"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"86.7876"	"30263"	"30263"	"30248"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.9"	""	"20.2"	""	"29.7"	""	"44.2"	""	"44.8"	"58.7"	""	"984"	"21"	"36.000"	"29.000"	"0.355602743372268"	"15"	"0.0001991"	"0.003458"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"575.63458"	"1724.88919"	"1724.88957"	"-0.22"	"-0.00013"	"11/94"	"11"	"94"	"2300190.4329834"	"HCD"	"MS2"	"5.71953"	"63.1"	"100.000"	"86.5091"	"30120"	"30120"	"30111"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.1"	""	"54.8"	""	"74.3"	""	"109.9"	"2.3"	"111.6"	"135.6"	""	"988"	"38"	"36.000"	"29.000"	"0.00756357206070923"	"22"	"9.9E-05"	"0.0004751"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"862.94849"	"1724.88970"	"1724.88957"	"0.07"	"0.00006"	"8/94"	"8"	"94"	"264689.176879883"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"86.8370"	"30249"	"30249"	"30234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"24.5"	""	"23.2"	""	"37.1"	""	"39.7"	"49.2"	""	"988"	"12"	"36.000"	"29.000"	"3.03897375118675"	"16"	"0.006237"	"0.07572"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"575.63477"	"1724.88974"	"1724.88957"	"0.10"	"0.00006"	"11/94"	"11"	"94"	"2624944.24621582"	"HCD"	"MS2"	"4.601604"	"69.7"	"100.000"	"86.5798"	"30180"	"30180"	"30164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.3"	""	"59.7"	""	"77.4"	""	"121.3"	""	"128.8"	"163.5"	""	"988"	"38"	"36.000"	"29.000"	"0.00844747565654602"	"22"	"9.9E-05"	"0.0006443"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8776"	"0.0000"	"1"	"1"	"1"	"862.94855"	"1724.88982"	"1724.88957"	"0.14"	"0.00012"	"14/94"	"14"	"94"	"756526.513305664"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"86.5528"	"30136"	"30136"	"30127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.2"	""	"47.9"	""	"64.6"	""	"108.3"	"1.3"	"97.2"	"132.1"	""	"993"	"49"	"36.000"	"29.000"	"0.000579320974870768"	"22"	"0"	"0.0001156"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"862.94873"	"1724.89018"	"1724.88957"	"0.35"	"0.00031"	"13/94"	"13"	"94"	"785665.089294434"	"HCD"	"MS2"	"0"	"61.7"	"100.000"	"86.4899"	"30144"	"30144"	"30135"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.9"	""	"51.6"	""	"67.2"	""	"107.4"	"1.6"	"99.3"	"134.5"	""	"986"	"39"	"36.000"	"29.000"	"0.00577892315215229"	"19"	"0"	"0.0002549"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"575.63507"	"1724.89066"	"1724.88957"	"0.63"	"0.00036"	"11/94"	"11"	"94"	"562798.519226074"	"HCD"	"MS2"	"78.88118"	"19.6"	"100.000"	"86.2392"	"30013"	"30013"	"29994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"23.7"	""	"25.4"	""	"34.7"	"2.1"	"39.5"	"37.0"	""	"991"	"40"	"36.000"	"29.000"	"0.00466706295077068"	"20"	"0"	"0.0002111"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VYQWEDPDSK"	"[K].vYQWEDPDSk.[L]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"575.63544"	"1724.89176"	"1724.88957"	"1.27"	"0.00073"	"11/94"	"11"	"94"	"823059.30670166"	"HCD"	"MS2"	"22.51878"	"25.4"	"100.000"	"86.2826"	"30062"	"30062"	"30043"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.3"	""	"30.2"	""	"29.0"	""	"41.2"	""	"43.6"	"58.4"	""	"999"	"38"	"36.000"	"29.000"	"0.00763019246089917"	"22"	"9.9E-05"	"0.0008697"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTK"	"[K].gFGNIATNEDTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"575.64435"	"1724.91849"	"1724.92193"	"-2.00"	"-0.00115"	"12/112"	"12"	"112"	"2644498.3760376"	"HCD"	"MS2"	"3.77286"	"80.7"	"100.000"	"66.5703"	"22080"	"22080"	"22066"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"96.6"	""	"91.8"	""	"90.8"	""	"166.8"	""	"189.6"	"135.6"	""	"1053"	"10"	"37.000"	"30.000"	"4.87975902009228"	"19"	"0.0001686"	"0.00135"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTK"	"[K].gFGNIATNEDTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.5652"	"0.0000"	"1"	"1"	"1"	"575.64490"	"1724.92014"	"1724.92193"	"-1.04"	"-0.00060"	"12/112"	"12"	"112"	"1143099.83679199"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"66.8913"	"22208"	"22208"	"22187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"36.6"	""	"35.5"	""	"86.0"	"0.8"	"85.0"	"81.4"	""	"1062"	"46"	"37.000"	"30.000"	"0.00147263297557013"	""	"0"	"2.925E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTK"	"[K].gFGNIATNEDTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.6596"	"0.0000"	"1"	"1"	"1"	"575.64496"	"1724.92032"	"1724.92193"	"-0.93"	"-0.00054"	"12/112"	"12"	"112"	"1259820.88427734"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"66.8052"	"22141"	"22141"	"22123"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.1"	""	"43.1"	""	"47.8"	""	"93.5"	""	"96.8"	"77.1"	""	"1062"	"47"	"37.000"	"30.000"	"0.00099104761583321"	""	"0"	"1.723E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTK"	"[K].gFGNIATNEDTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"862.96454"	"1724.92180"	"1724.92193"	"-0.08"	"-0.00007"	"13/112"	"13"	"112"	"606742.278320313"	"HCD"	"MS2"	"0"	"57.7"	"100.000"	"66.5886"	"22087"	"22087"	"22076"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"58.9"	""	"59.0"	""	"130.9"	""	"131.0"	"108.9"	""	"1057"	"12"	"37.000"	"30.000"	"3.44385606261156"	"17"	"0.0001686"	"0.001722"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTK"	"[K].gFGNIATNEDTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.7925"	"0.0000"	"1"	"1"	"1"	"862.96490"	"1724.92253"	"1724.92193"	"0.35"	"0.00030"	"9/112"	"9"	"112"	"246388.632446289"	"HCD"	"MS2"	"0"	"24.9"	"100.000"	"66.8866"	"22206"	"22206"	"22187"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"28.4"	""	"18.5"	""	"61.4"	""	"65.4"	"37.8"	""	"1066"	"53"	"37.000"	"30.000"	"0.00029021991396501"	"27"	"0"	"3.018E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGNIATNEDTK"	"[K].gFGNIATNEDTk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"2"	"2"	"0.8393"	"0.0000"	"1"	"1"	"1"	"862.96570"	"1724.92412"	"1724.92193"	"1.27"	"0.00109"	"16/112"	"16"	"112"	"341902.069641113"	"HCD"	"MS2"	"0"	"38.4"	"100.000"	"66.6744"	"22088"	"22088"	"22072"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.3"	""	"30.3"	""	"25.8"	""	"85.3"	"0.9"	"102.2"	"75.9"	""	"1094"	"56"	"37.000"	"30.000"	"0.000152400827924049"	"24"	"0"	"1.95E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLRPELEELR"	"[K].dILLRPELEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.67480"	"1725.00986"	"1725.01080"	"-0.54"	"-0.00031"	"8/120"	"8"	"120"	"415956.141967773"	"HCD"	"MS2"	"8.733354"	"10.7"	"100.000"	"104.5733"	"37408"	"37408"	"37387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"9.0"	""	"8.2"	""	"17.3"	""	"29.9"	"25.3"	""	"700"	"20"	"35.000"	"28.000"	"0.352426084098132"	"14"	"0"	"5.189E-05"	"0.712"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLRPELEELR"	"[K].dILLRPELEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"575.67499"	"1725.01041"	"1725.01080"	"-0.23"	"-0.00013"	"11/120"	"11"	"120"	"447902.938476563"	"HCD"	"MS2"	"9.354427"	"13.0"	"100.000"	"104.8619"	"37542"	"37542"	"37532"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.9"	""	"10.6"	""	"12.0"	""	"22.7"	""	"36.7"	"29.9"	""	"693"	"24"	"35.000"	"28.000"	"0.135426370392067"	"16"	"0"	"2.124E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLRPELEELR"	"[K].dILLRPELEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"575.67505"	"1725.01059"	"1725.01080"	"-0.12"	"-0.00007"	"6/120"	"6"	"120"	"1550602.79040527"	"HCD"	"MS2"	"0"	"32.9"	"100.000"	"104.2647"	"37304"	"37304"	"37288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"26.1"	""	"35.3"	""	"58.8"	"2.4"	"89.7"	"65.7"	""	"693"	"20"	"35.000"	"28.000"	"0.375580675708347"	"17"	"0"	"5.631E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLRPELEELR"	"[K].dILLRPELEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"575.67523"	"1725.01114"	"1725.01080"	"0.20"	"0.00011"	"13/120"	"13"	"120"	"1612758.06695557"	"HCD"	"MS2"	"3.168719"	"35.5"	"100.000"	"104.5630"	"37424"	"37424"	"37407"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.6"	""	"27.9"	""	"37.2"	""	"65.3"	""	"104.7"	"71.6"	""	"689"	"26"	"35.000"	"28.000"	"0.0937970600632841"	"16"	"0"	"4.152E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLRPELEELR"	"[K].dILLRPELEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.7308"	"0.0000"	"1"	"1"	"1"	"575.67523"	"1725.01114"	"1725.01080"	"0.20"	"0.00011"	"7/120"	"7"	"120"	"1735483.30206299"	"HCD"	"MS2"	"2.801814"	"36.4"	"100.000"	"104.2838"	"37294"	"37294"	"37286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"36.0"	""	"35.3"	""	"69.8"	""	"105.3"	"75.5"	""	"689"	"26"	"35.000"	"28.000"	"0.0970932919820605"	"21"	"0"	"5.463E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DILLRPELEELR"	"[K].dILLRPELEELR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"575.67535"	"1725.01151"	"1725.01080"	"0.41"	"0.00024"	"7/120"	"7"	"120"	"2592480.40606689"	"HCD"	"MS2"	"4.192886"	"48.6"	"100.000"	"104.0063"	"37183"	"37183"	"37165"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"37.1"	""	"43.4"	""	"97.9"	""	"146.3"	"98.5"	""	"664"	"25"	"35.000"	"28.000"	"0.0982060138895114"	"21"	"0"	"2.955E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDDEESWIK"	"[R].dMDDEESWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"863.42487"	"1725.84245"	"1725.84057"	"1.09"	"0.00094"	"9/84"	"9"	"84"	"131354.571166992"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"97.9821"	"34748"	"34748"	"34723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"12.4"	""	"10.1"	""	"22.2"	""	"22.6"	"27.1"	""	"746"	"28"	"35.000"	"28.000"	"0.0611939985403427"	"21"	"0.001261"	"0.009593"	"0.245"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMDDEESWIK"	"[R].dMDDEESWIk.[E]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"863.42499"	"1725.84270"	"1725.84057"	"1.23"	"0.00106"	"7/84"	"7"	"84"	"131123.751342773"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"98.0376"	"34802"	"34802"	"34773"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"9.6"	""	"10.4"	""	"20.2"	""	"21.8"	"31.8"	""	"743"	"37"	"35.000"	"28.000"	"0.00746377979884142"	"17"	"9.9E-05"	"0.0005815"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"863.47260"	"1725.93791"	"1725.94234"	"-2.56"	"-0.00221"	"9/122"	"9"	"122"	"592360.963928223"	"HCD"	"MS2"	"0"	"60.3"	"100.000"	"66.5231"	"22028"	"22028"	"22017"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.6"	""	"58.6"	""	"60.3"	""	"115.9"	""	"149.2"	"121.5"	""	"992"	"54"	"36.000"	"29.000"	"0.000221555061706878"	"25"	"0"	"1.463E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9867"	"0.0000"	"1"	"1"	"1"	"863.47296"	"1725.93865"	"1725.94234"	"-2.14"	"-0.00184"	"10/122"	"10"	"122"	"353478.239379883"	"HCD"	"MS2"	"0"	"31.1"	"100.000"	"66.2206"	"21908"	"21908"	"21881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"34.6"	""	"37.0"	""	"58.7"	"0.9"	"70.1"	"53.3"	""	"991"	"75"	"36.000"	"29.000"	"1.42575091450152E-06"	"18"	"0"	"6.354E-08"	"1.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.47296"	"1725.93865"	"1725.94234"	"-2.14"	"-0.00184"	"14/122"	"14"	"122"	"515695.873535156"	"HCD"	"MS2"	"0"	"48.3"	"100.000"	"66.4739"	"22042"	"22042"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.4"	""	"49.6"	""	"56.4"	""	"93.6"	""	"108.5"	"96.0"	""	"991"	"49"	"36.000"	"29.000"	"0.000650195049964015"	"16"	"0"	"5.002E-07"	"1.127"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"863.47388"	"1725.94048"	"1725.94234"	"-1.08"	"-0.00093"	"9/122"	"9"	"122"	"193447.229492188"	"HCD"	"MS2"	"100"	"17.0"	"100.000"	"66.1806"	"21925"	"21925"	"21894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"17.8"	""	"22.2"	""	"28.5"	""	"38.7"	"33.3"	""	"1003"	"49"	"37.000"	"30.000"	"0.000563989394444414"	"17"	"0"	"1.589E-06"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98529"	"1725.94132"	"1725.94234"	"-0.59"	"-0.00034"	"8/122"	"8"	"122"	"2831401.37585449"	"HCD"	"MS2"	"27.78957"	"85.4"	"100.000"	"66.4797"	"22011"	"22011"	"21992"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.7"	""	"90.8"	""	"99.4"	""	"175.1"	""	"182.1"	"170.9"	""	"998"	"52"	"36.000"	"29.000"	"0.000322181460288293"	"16"	"0"	"2.688E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98529"	"1725.94132"	"1725.94234"	"-0.59"	"-0.00034"	"8/122"	"8"	"122"	"2963874.99829102"	"HCD"	"MS2"	"19.41885"	"81.6"	"100.000"	"66.4672"	"22039"	"22039"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.9"	""	"91.5"	""	"91.2"	""	"166.1"	""	"183.6"	"157.6"	""	"998"	"50"	"36.000"	"29.000"	"0.000460363142150226"	"16"	"0"	"1.953E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98541"	"1725.94168"	"1725.94234"	"-0.38"	"-0.00022"	"9/122"	"9"	"122"	"2951032.95550537"	"HCD"	"MS2"	"49.29524"	"83.4"	"100.000"	"66.3971"	"21978"	"21978"	"21966"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.1"	""	"94.9"	""	"89.2"	""	"156.9"	""	"182.2"	"167.8"	""	"1001"	"65"	"36.000"	"30.000"	"1.46017222050759E-05"	"17"	"0"	"4.109E-07"	"1.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"575.98547"	"1725.94187"	"1725.94234"	"-0.27"	"-0.00016"	"10/122"	"10"	"122"	"718310.341552734"	"HCD"	"MS2"	"14.25841"	"26.8"	"100.000"	"66.0736"	"21848"	"21848"	"21817"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.8"	""	"38.9"	""	"28.5"	""	"44.4"	"0.8"	"53.5"	"52.0"	""	"1001"	"40"	"36.000"	"30.000"	"0.00476874480093837"	"17"	"0"	"8.806E-06"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSVVEASEAAYK"	"[K].nSVVEASEAAYk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"575.98590"	"1725.94315"	"1725.94234"	"0.47"	"0.00027"	"8/122"	"8"	"122"	"1026077.42950439"	"HCD"	"MS2"	"23.92134"	"36.6"	"100.000"	"66.1737"	"21922"	"21922"	"21894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"48.1"	""	"46.4"	""	"71.0"	""	"70.2"	"71.4"	""	"992"	"54"	"36.000"	"29.000"	"0.000201595891265946"	"18"	"0"	"3.303E-06"	"0.959"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"575.98602"	"1725.94352"	"1725.94636"	"-1.65"	"-0.00095"	"14/106"	"14"	"106"	"446328.564880371"	"HCD"	"MS2"	"6.638093"	"17.6"	"100.000"	"111.5569"	"40154"	"40154"	"40124"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"25.2"	""	"24.6"	""	"25.7"	""	"26.5"	"41.3"	""	"990"	"44"	"36.000"	"29.000"	"0.00193466243417239"	"20"	"0.004634"	"0.05437"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98663"	"1725.94535"	"1725.94636"	"-0.59"	"-0.00034"	"14/106"	"14"	"106"	"527091.530700684"	"HCD"	"MS2"	"20.69946"	"19.1"	"100.000"	"111.4809"	"40109"	"40109"	"40087"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"31.1"	""	"26.9"	""	"30.0"	""	"34.8"	"35.4"	""	"958"	"43"	"36.000"	"29.000"	"0.00259618426502378"	"15"	"0.00511"	"0.06497"	"0.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"575.98663"	"1725.94535"	"1725.94636"	"-0.59"	"-0.00034"	"13/106"	"13"	"106"	"1056204.06341553"	"HCD"	"MS2"	"0"	"32.1"	"100.000"	"111.8602"	"40277"	"40277"	"40252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"50.8"	""	"43.7"	""	"49.3"	""	"64.9"	"54.2"	""	"958"	"37"	"36.000"	"29.000"	"0.0097574315522104"	"15"	"0.0001991"	"0.002726"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.8167"	"0.0000"	"1"	"1"	"1"	"863.47650"	"1725.94573"	"1725.94636"	"-0.37"	"-0.00032"	"9/106"	"9"	"106"	"532052.399414063"	"HCD"	"MS2"	"0"	"40.1"	"100.000"	"111.8510"	"40273"	"40273"	"40252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.6"	""	"53.0"	""	"47.7"	""	"63.9"	"0.1"	"74.4"	"76.4"	""	"961"	"60"	"36.000"	"29.000"	"4.84946011759847E-05"	"27"	"0"	"1.075E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"863.47662"	"1725.94597"	"1725.94636"	"-0.23"	"-0.00019"	"10/106"	"10"	"106"	"602047.031982422"	"HCD"	"MS2"	"0"	"46.3"	"100.000"	"111.7585"	"40222"	"40222"	"40199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.9"	""	"60.9"	""	"57.4"	""	"72.4"	""	"93.7"	"86.4"	""	"961"	"52"	"36.000"	"29.000"	"0.000318928545328117"	"20"	"0.0001686"	"0.001525"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"575.98688"	"1725.94608"	"1725.94636"	"-0.16"	"-0.00009"	"12/106"	"12"	"106"	"1434251.34906006"	"HCD"	"MS2"	"9.277534"	"41.9"	"100.000"	"111.7860"	"40233"	"40233"	"40215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.6"	""	"59.4"	""	"51.0"	""	"69.7"	"1.5"	"75.7"	"70.5"	""	"960"	"44"	"36.000"	"29.000"	"0.00180401954058453"	"19"	"9.9E-05"	"0.0004062"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPNAEFAEITK"	"[R].fPnAEFAEITk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.47723"	"1725.94719"	"1725.94636"	"0.48"	"0.00042"	"8/106"	"8"	"106"	"210141.259643555"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"111.4599"	"40101"	"40101"	"40071"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.4"	""	"31.4"	""	"17.2"	""	"19.9"	""	"27.0"	"24.2"	""	"951"	"40"	"36.000"	"29.000"	"0.00471140589796511"	"15"	"0.0001991"	"0.004589"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPERDPLILLSR"	"[R].tSPERDPLILLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.00732"	"1726.00742"	"1726.00605"	"0.79"	"0.00046"	"5/134"	"5"	"134"	"310930.235046387"	"HCD"	"MS2"	"14.92317"	"13.8"	"100.000"	"89.2183"	"31246"	"31246"	"31228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"11.4"	""	"18.3"	""	"21.4"	""	"32.6"	"31.1"	""	"662"	"5"	"35.000"	"28.000"	"11.5565444423412"	"13"	"0.004073"	"0.04397"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPERDPLILLSR"	"[R].tSPERDPLILLSR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"G3V9D0"	"Protein O-glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Poglut1 PE=3 SV=1"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"576.00751"	"1726.00797"	"1726.00605"	"1.11"	"0.00064"	"10/134"	"10"	"134"	"373116.528442383"	"HCD"	"MS2"	"21.50734"	"13.8"	"100.000"	"89.0553"	"31142"	"31142"	"31119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.1"	""	"18.0"	""	"14.9"	""	"24.7"	""	"23.9"	"34.4"	""	"674"	"4"	"35.000"	"28.000"	"12.348946265632"	"13"	"0.000264"	"0.006031"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQYIDENQDR"	"[K].aVFQYIDENQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.29065"	"1726.85739"	"1726.85978"	"-1.38"	"-0.00079"	"12/112"	"12"	"112"	"389749.354309082"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"95.7568"	"33847"	"33847"	"33824"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.5"	""	"12.8"	""	"11.6"	""	"15.7"	""	"16.7"	"24.8"	""	"787"	"25"	"35.000"	"28.000"	"0.133335175440776"	"14"	"0.0001686"	"0.001494"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQYIDENQDR"	"[K].aVFQYIDENQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.29077"	"1726.85776"	"1726.85978"	"-1.17"	"-0.00067"	"12/112"	"12"	"112"	"390457.44708252"	"HCD"	"MS2"	"7.80839"	"8.5"	"100.000"	"95.7058"	"33859"	"33859"	"33836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"13.9"	""	"9.5"	""	"15.5"	""	"14.1"	"17.5"	""	"791"	"33"	"35.000"	"28.000"	"0.0210448816540017"	"15"	"0"	"0.0003138"	"0.552"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQYIDENQDR"	"[K].aVFQYIDENQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.93262"	"1726.85796"	"1726.85978"	"-1.05"	"-0.00091"	"6/112"	"6"	"112"	"108199.69720459"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"95.5167"	"33782"	"33782"	"33761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"7.3"	""	"4.3"	""	"13.1"	""	"12.3"	"9.1"	""	"791"	"9"	"35.000"	"28.000"	"4.89944049972761"	"13"	"0.004893"	"0.06045"	"0.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQYIDENQDR"	"[K].aVFQYIDENQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.93304"	"1726.85881"	"1726.85978"	"-0.56"	"-0.00048"	"8/112"	"8"	"112"	"91949.5970458984"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"95.5076"	"33746"	"33746"	"33724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"6.0"	""	"4.8"	""	"7.7"	""	"10.9"	"10.3"	""	"795"	"17"	"35.000"	"29.000"	"0.853762613466887"	"14"	"0.0001991"	"0.004974"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQYIDENQDR"	"[K].aVFQYIDENQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.93311"	"1726.85893"	"1726.85978"	"-0.49"	"-0.00042"	"8/112"	"8"	"112"	"96797.1198730469"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"95.8215"	"33873"	"33873"	"33850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"6.1"	""	"6.7"	""	"16.9"	""	"12.9"	"9.4"	""	"795"	"20"	"35.000"	"29.000"	"0.419118791315525"	"14"	"0.0001991"	"0.002338"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQLDDTSFANSR"	"[R].fPQLDDTSFANSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.6316"	"0.0000"	"1"	"1"	"1"	"863.93341"	"1726.85954"	"1726.85978"	"-0.14"	"-0.00012"	"9/130"	"9"	"130"	"138392.784423828"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"102.5712"	"36630"	"36630"	"36611"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"10.6"	""	"9.6"	""	"9.6"	"1.6"	"11.4"	"11.9"	""	"795"	"19"	"35.000"	"29.000"	"0.525215014589164"	"21"	"0.004392"	"0.052"	"0.091"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQLDDTSFANSR"	"[R].fPQLDDTSFANSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8413"	"0.0000"	"1"	"1"	"1"	"576.29144"	"1726.85978"	"1726.85978"	"0.00"	"0.00000"	"10/130"	"10"	"130"	"1083558.27282715"	"HCD"	"MS2"	"4.059401"	"16.3"	"100.000"	"102.6636"	"36643"	"36643"	"36625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.8"	""	"20.5"	""	"22.8"	""	"30.3"	"2.0"	"27.8"	"28.0"	""	"788"	"63"	"35.000"	"28.000"	"1.9701360678093E-05"	"26"	"0"	"3.543E-06"	"0.952"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVFQYIDENQDR"	"[K].aVFQYIDENQDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"Q6Q0N1"	"Cytosolic non-specific dipeptidase OS=Rattus norvegicus OX=10116 GN=Cndp2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.93372"	"1726.86016"	"1726.85978"	"0.22"	"0.00019"	"5/112"	"5"	"112"	"95347.8574829102"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"95.8373"	"33912"	"33912"	"33891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.8"	""	"4.8"	""	"5.5"	""	"7.6"	""	"8.1"	"8.7"	""	"790"	"14"	"35.000"	"28.000"	"1.6657011885429"	"13"	"0.0001991"	"0.002814"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQLDDTSFANSR"	"[R].fPQLDDTSFANSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.7969"	"0.0000"	"1"	"1"	"1"	"863.93378"	"1726.86028"	"1726.85978"	"0.29"	"0.00025"	"12/130"	"12"	"130"	"541820.211486816"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"102.6198"	"36626"	"36626"	"36609"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.9"	""	"39.8"	""	"41.3"	""	"30.6"	"1.2"	"26.3"	"33.1"	""	"794"	"64"	"35.000"	"28.000"	"1.73296785399346E-05"	""	"0"	"1.029E-05"	"0.857"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQLDDTSFANSR"	"[R].fPQLDDTSFANSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"576.29163"	"1726.86032"	"1726.85978"	"0.32"	"0.00018"	"8/130"	"8"	"130"	"1072115.23370361"	"HCD"	"MS2"	"4.105961"	"16.5"	"100.000"	"102.8787"	"36752"	"36752"	"36733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.6"	""	"23.0"	""	"20.7"	""	"28.1"	"2.2"	"29.8"	"29.6"	""	"794"	"55"	"35.000"	"28.000"	"0.000139891235803867"	"25"	"0"	"1.243E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQLDDTSFANSR"	"[R].fPQLDDTSFANSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"863.93408"	"1726.86089"	"1726.85978"	"0.64"	"0.00055"	"4/130"	"4"	"130"	"99405.015625"	"HCD"	"MS2"	"6.658534"	"4.5"	"100.000"	"102.9310"	"36752"	"36752"	"36730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.7"	""	"9.0"	""	"5.2"	""	"5.2"	""	"7.0"	"10.0"	""	"795"	"13"	"35.000"	"29.000"	"2.03862400136568"	"16"	"0.005507"	"0.06995"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FPQLDDTSFANSR"	"[R].fPQLDDTSFANSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"2"	"2"	"0.8873"	"0.0000"	"1"	"1"	"1"	"863.93408"	"1726.86089"	"1726.85978"	"0.64"	"0.00055"	"12/130"	"12"	"130"	"480156.930969238"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"102.8718"	"36749"	"36749"	"36733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.2"	""	"35.8"	""	"32.9"	""	"30.1"	""	"25.0"	"34.8"	""	"795"	"71"	"35.000"	"29.000"	"3.32152199746921E-06"	"25"	"0"	"2.698E-07"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NISEAEEWYK"	"[K].nISEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"576.30597"	"1726.90335"	"1726.90522"	"-1.08"	"-0.00062"	"9/98"	"9"	"98"	"552851.670898438"	"HCD"	"MS2"	"74.52684"	"19.2"	"100.000"	"96.5163"	"34154"	"34154"	"34135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"28.3"	""	"36.8"	""	"22.7"	"0.6"	"31.5"	"33.5"	""	"955"	"24"	"36.000"	"29.000"	"0.187920161030134"	"14"	"9.9E-05"	"0.0009872"	"0.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"NLQSAEEWYK"	"[].nLqSAEEWYk.[]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"576.30597"	"1726.90335"	"1726.90522"	"-1.08"	"-0.00062"	"9/96"	"9"	"96"	"552851.670898438"	"HCD"	"MS2"	"74.52684"	"19.2"	"100.000"	"96.5163"	"34154"	"34154"	"34135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"28.3"	""	"36.8"	""	"22.7"	"0.6"	"31.5"	"33.5"	""	"955"	"24"	"36.000"	"29.000"	"0.187920161030134"	"14"	"0.002525"	"0.02522"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NISEAEEWYK"	"[K].nISEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"863.95557"	"1726.90386"	"1726.90522"	"-0.79"	"-0.00068"	"6/98"	"6"	"98"	"182802.175415039"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"96.7610"	"34253"	"34253"	"34235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"28.8"	""	"27.4"	""	"14.4"	""	"26.2"	"33.5"	""	"950"	"25"	"36.000"	"29.000"	"0.141805674398603"	"14"	"0.001615"	"0.01458"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"NLQSAEEWYK"	"[].nLqSAEEWYk.[]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"863.95557"	"1726.90386"	"1726.90522"	"-0.79"	"-0.00068"	"6/96"	"6"	"96"	"182802.175415039"	"HCD"	"MS2"	"0"	"16.8"	"100.000"	"96.7610"	"34253"	"34253"	"34235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	""	"28.8"	""	"27.4"	""	"14.4"	""	"26.2"	"33.5"	""	"950"	"25"	"36.000"	"29.000"	"0.141805674398603"	"14"	"0.001615"	"0.01458"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISEAEEWYK"	"[K].nISEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"3"	"3"	"0.0800"	"0.0000"	"1"	"1"	"1"	"576.30627"	"1726.90427"	"1726.90522"	"-0.55"	"-0.00032"	"11/98"	"11"	"98"	"685283.935852051"	"HCD"	"MS2"	"20.13774"	"23.9"	"100.000"	"96.6507"	"34239"	"34239"	"34220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.8"	""	"38.5"	""	"41.0"	""	"27.6"	""	"39.3"	"49.4"	""	"942"	"25"	"36.000"	"29.000"	"0.134282960399434"	""	"0.0001686"	"0.001504"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NISEAEEWYK"	"[K].nISEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"863.95581"	"1726.90434"	"1726.90522"	"-0.51"	"-0.00044"	"9/98"	"9"	"98"	"181407.199645996"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"96.8354"	"34314"	"34314"	"34295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"25.5"	""	"24.9"	""	"14.7"	""	"31.6"	"32.0"	""	"942"	"29"	"36.000"	"29.000"	"0.0530910001858665"	"16"	"0.0001991"	"0.004178"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"NLQSAEEWYK"	"[].nLqSAEEWYk.[]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"863.95581"	"1726.90434"	"1726.90522"	"-0.51"	"-0.00044"	"9/96"	"9"	"96"	"181407.199645996"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"96.8354"	"34314"	"34314"	"34295"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"25.5"	""	"24.9"	""	"14.7"	""	"31.6"	"32.0"	""	"942"	"29"	"36.000"	"29.000"	"0.0530910001858665"	"16"	"0.0001991"	"0.004178"	"0.32"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISEAEEWYK"	"[K].nISEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.1875"	"0.0000"	"1"	"1"	"1"	"863.95605"	"1726.90483"	"1726.90522"	"-0.23"	"-0.00019"	"13/98"	"13"	"98"	"176663.613586426"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"96.4608"	"34132"	"34132"	"34110"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.7"	""	"35.9"	""	"22.7"	""	"11.6"	""	"22.9"	"30.3"	""	"941"	"49"	"36.000"	"29.000"	"0.000664598914745006"	""	"0"	"6.028E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NISEAEEWYK"	"[K].nISEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"P48675"	"Desmin OS=Rattus norvegicus OX=10116 GN=Des PE=1 SV=2"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"863.95612"	"1726.90495"	"1726.90522"	"-0.15"	"-0.00013"	"12/98"	"12"	"98"	"146096.544616699"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"96.5139"	"34185"	"34185"	"34162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.8"	""	"27.2"	""	"22.4"	""	"10.7"	""	"19.6"	"22.6"	""	"940"	"39"	"36.000"	"29.000"	"0.00608272045481493"	"15"	"0.0001686"	"0.001948"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Rejected"	"NLQSAEEWYK"	"[].nLqSAEEWYk.[]"	"N-Term(TMT6plex); Q3(Deamidated); K10(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"863.95612"	"1726.90495"	"1726.90522"	"-0.16"	"-0.00013"	"12/96"	"12"	"96"	"146096.544616699"	"HCD"	"MS2"	"0"	"13.6"	"100.000"	"96.5139"	"34185"	"34185"	"34162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.8"	""	"27.2"	""	"22.4"	""	"10.7"	""	"19.6"	"22.6"	""	"940"	"39"	"36.000"	"29.000"	"0.00608272045481493"	"15"	"0.0001686"	"0.001948"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASLDVEPIYTFR"	"[K].sASLDVEPIYTFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.96466"	"1726.92204"	"1726.92132"	"0.42"	"0.00036"	"3/116"	"3"	"116"	"81364.7781982422"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"109.5927"	"39359"	"39359"	"39347"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"2.7"	""	"6.8"	""	"5.6"	""	"7.2"	"7.6"	""	"992"	"9"	"36.000"	"29.000"	"6.83095896571398"	"13"	"0.007485"	"0.09584"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SASLDVEPIYTFR"	"[K].sASLDVEPIYTFR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"P58405"	"Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"863.96503"	"1726.92278"	"1726.92132"	"0.85"	"0.00073"	"4/116"	"4"	"116"	"91368.0463256836"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"109.3050"	"39237"	"39237"	"39221"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.2"	""	"3.6"	""	"6.3"	""	"6.3"	""	"7.0"	"10.1"	""	"984"	"10"	"36.000"	"29.000"	"5.24765291645287"	"13"	"0.005266"	"0.06683"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEFSRPPLVHVK"	"[-].mEFSRPPLVHVk.[G]"	"N-Term(Prot)(Acetyl); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"P17988"	"Sulfotransferase 1A1 OS=Rattus norvegicus OX=10116 GN=Sult1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"576.32184"	"1726.95096"	"1726.95118"	"-0.13"	"-0.00007"	"10/106"	"10"	"106"	"922081.658508301"	"HCD"	"MS2"	""	"32.1"	"100.000"	"70.5063"	"23677"	"23677"	"23657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.8"	""	"45.9"	""	"43.5"	""	"67.6"	""	"63.1"	"50.4"	""	"1013"	"9"	"37.000"	"30.000"	"6.00591870946667"	"14"	"0.0001991"	"0.004478"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAELLEPLMPAIR"	"[K].eAELLEPLmPAIR.[A]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"P23514"	"Coatomer subunit beta OS=Rattus norvegicus OX=10116 GN=Copb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"576.32349"	"1726.95591"	"1726.96107"	"-2.99"	"-0.00172"	"12/106"	"12"	"106"	"218511.709228516"	"HCD"	"MS2"	"10.92058"	"8.5"	"100.000"	"109.8557"	"39450"	"39450"	"39433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"9.7"	""	"12.2"	""	"11.4"	""	"15.0"	"26.0"	""	"1006"	"27"	"37.000"	"30.000"	"0.0906917923652363"	"22"	"9.9E-05"	"0.0004183"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKEETIEK"	"[K].ykEETIEk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"1"	"3"	"3"	"0.6429"	"0.0000"	"1"	"1"	"1"	"576.34497"	"1727.02036"	"1727.01941"	"0.55"	"0.00032"	"5/76"	"5"	"76"	"1852855.07781982"	"HCD"	"MS2"	"14.42642"	"115.6"	"100.000"	"47.1264"	"14150"	"14150"	"14132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.8"	""	"157.3"	""	"161.5"	""	"172.5"	"0.5"	"232.3"	"199.9"	""	"615"	"14"	"34.000"	"27.000"	"1.1451044967328"	"19"	"0.001316"	"0.01037"	"0.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKEETIEK"	"[K].ykEETIEk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"1"	"3"	"3"	"0.6842"	"0.0000"	"1"	"1"	"1"	"576.34497"	"1727.02036"	"1727.01941"	"0.55"	"0.00032"	"5/76"	"5"	"76"	"3106976.29193115"	"HCD"	"MS2"	"0"	"179.1"	"100.000"	"46.5451"	"13952"	"13952"	"13938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"279.9"	""	"234.3"	""	"279.1"	""	"267.2"	""	"340.2"	"296.3"	""	"615"	"19"	"34.000"	"27.000"	"0.41576231318224"	"19"	"0.004213"	"0.04613"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKEETIEK"	"[K].ykEETIEk.[M]"	"N-Term(TMT6plex); K2(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"P12749"	"60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1"	"1"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"576.34546"	"1727.02182"	"1727.01941"	"1.40"	"0.00080"	"5/76"	"5"	"76"	"1859901.92547607"	"HCD"	"MS2"	"0"	"105.1"	"100.000"	"46.8420"	"14035"	"14035"	"14020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"171.8"	""	"146.0"	""	"143.7"	""	"165.3"	"0.4"	"193.9"	"174.1"	""	"610"	"18"	"34.000"	"27.000"	"0.493514411481135"	"19"	"0.006777"	"0.0843"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MMLGAEGGEGFVVK"	"[-].mmLGAEGGEGFVVk.[V]"	"N-Term(Prot)(Acetyl); M1(Oxidation); M2(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"Q8VHV7"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.43097"	"1727.85466"	"1727.85456"	"0.06"	"0.00005"	"6/110"	"6"	"110"	"79297.4124145508"	"HCD"	"MS2"	"0"	"2.3"	"100.000"	"104.9901"	"37573"	"37573"	"37546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.1"	""	""	""	"4.0"	""	"4.7"	""	"4.8"	"4.4"	""	"744"	"9"	"35.000"	"28.000"	"4.65096359240991"	"13"	"0.001453"	"0.01162"	"0.228"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YAPGYNADVGDK"	"[K].yAPGYNADVGDk.[W]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q561S0"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa10 PE=1 SV=1"	"Q561S0"	"NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ndufa10 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.63684"	"1727.89597"	"1727.90047"	"-2.61"	"-0.00150"	"4/106"	"4"	"106"	"420407.302612305"	"HCD"	"MS2"	"37.05502"	"21.6"	"100.000"	"63.0074"	"20634"	"20634"	"20608"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"26.4"	""	"32.0"	""	"34.7"	"1.1"	"37.2"	"39.5"	""	"902"	"8"	"36.000"	"29.000"	"7.58886001542781"	"13"	"0.002588"	"0.02719"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.47662"	"1727.94597"	"1727.94675"	"-0.45"	"-0.00039"	"8/96"	"8"	"96"	"133472.61138916"	"HCD"	"MS2"	"100"	"12.8"	"100.000"	"94.6940"	"33416"	"33416"	"33393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"11.9"	""	"9.0"	""	"22.5"	""	"37.4"	"30.0"	""	"962"	"17"	"36.000"	"29.000"	"0.89979810951595"	"14"	"0.0001991"	"0.004451"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYETATLSEIK"	"[K].dYETATLSEIk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"Q9Z1P2"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1"	"0"	"2"	"2"	"0.9714"	"0.0000"	"1"	"1"	"1"	"864.47729"	"1727.94731"	"1727.94675"	"0.32"	"0.00028"	"12/96"	"12"	"96"	"126944.975708008"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"94.7071"	"33455"	"33455"	"33436"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.9"	""	"10.9"	""	"9.9"	""	"18.8"	""	"30.2"	"32.0"	""	"962"	"35"	"36.000"	"29.000"	"0.0162609186215077"	"16"	"9.9E-05"	"0.0005511"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.50574"	"1728.00420"	"1728.00560"	"-0.81"	"-0.00070"	"6/114"	"6"	"114"	"255092.628356934"	"HCD"	"MS2"	"24.08064"	"20.1"	"100.000"	"72.8943"	"24641"	"24641"	"24616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"23.5"	""	"32.7"	""	"37.0"	""	"35.9"	"34.8"	""	"806"	"19"	"36.000"	"29.000"	"0.487871047820845"	"14"	"0.0001991"	"0.001972"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"576.67303"	"1728.00455"	"1728.00560"	"-0.61"	"-0.00035"	"13/114"	"13"	"114"	"909237.860351563"	"HCD"	"MS2"	"25.73339"	"32.6"	"100.000"	"72.8399"	"24589"	"24589"	"24570"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.9"	""	"38.9"	""	"45.0"	""	"54.0"	"1.4"	"51.9"	"68.8"	""	"805"	"43"	"36.000"	"29.000"	"0.00214173574354885"	"22"	"0"	"1.532E-05"	"0.821"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"864.50610"	"1728.00493"	"1728.00560"	"-0.39"	"-0.00034"	"20/114"	"20"	"114"	"1571783.24572754"	"HCD"	"MS2"	"0"	"106.1"	"100.000"	"72.4214"	"24419"	"24419"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.2"	""	"130.5"	""	"138.5"	""	"176.5"	"0.1"	"193.7"	"223.2"	""	"806"	"84"	"36.000"	"29.000"	"1.57508881004338E-07"	"22"	"0"	"1.497E-07"	"1.235"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8452"	"0.0000"	"1"	"1"	"1"	"576.67328"	"1728.00528"	"1728.00560"	"-0.19"	"-0.00011"	"11/114"	"11"	"114"	"8455832.19567871"	"HCD"	"MS2"	"5.861081"	"175.8"	"100.000"	"72.6130"	"24527"	"24527"	"24510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"243.0"	""	"229.2"	""	"228.3"	""	"305.2"	""	"323.8"	"339.5"	""	"805"	"84"	"36.000"	"29.000"	"1.53026232019026E-07"	""	"0"	"1.865E-09"	"1.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.50635"	"1728.00542"	"1728.00560"	"-0.11"	"-0.00009"	"8/114"	"8"	"114"	"237165.463378906"	"HCD"	"MS2"	"0"	"19.7"	"100.000"	"72.7315"	"24545"	"24545"	"24523"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"19.5"	""	"24.6"	""	"32.2"	""	"38.0"	"41.0"	""	"805"	"40"	"36.000"	"29.000"	"0.00375634856070789"	"15"	"0"	"9.807E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9011"	"0.0000"	"1"	"1"	"1"	"864.50635"	"1728.00542"	"1728.00560"	"-0.11"	"-0.00009"	"11/114"	"11"	"114"	"1565395.94671631"	"HCD"	"MS2"	"0"	"99.0"	"100.000"	"72.5832"	"24514"	"24514"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"137.3"	""	"130.3"	""	"124.3"	""	"176.2"	"3.3"	"177.7"	"189.5"	""	"805"	"91"	"36.000"	"29.000"	"3.08152634281781E-08"	"27"	"0"	"2.094E-07"	"1.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"576.67340"	"1728.00565"	"1728.00560"	"0.03"	"0.00001"	"10/114"	"10"	"114"	"8586968.12243652"	"HCD"	"MS2"	"6.169178"	"190.2"	"100.000"	"72.4942"	"24449"	"24449"	"24432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"252.0"	""	"236.3"	""	"254.8"	""	"329.7"	""	"344.8"	"387.3"	""	"805"	"74"	"36.000"	"29.000"	"1.48171911891119E-06"	""	"0"	"8.134E-07"	"1.084"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"576.67346"	"1728.00583"	"1728.00560"	"0.13"	"0.00008"	"13/114"	"13"	"114"	"1161729.92169189"	"HCD"	"MS2"	"18.31547"	"41.0"	"100.000"	"72.9244"	"24653"	"24653"	"24632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"45.5"	""	"58.7"	""	"72.9"	"0.2"	"71.0"	"83.6"	""	"809"	"49"	"36.000"	"29.000"	"0.000497643717793608"	"23"	"0"	"7.68E-06"	"0.883"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"576.67352"	"1728.00602"	"1728.00560"	"0.24"	"0.00014"	"15/114"	"15"	"114"	"2887363.19677734"	"HCD"	"MS2"	"8.658831"	"70.6"	"100.000"	"72.3163"	"24406"	"24406"	"24386"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.1"	""	"100.9"	""	"94.6"	""	"121.5"	""	"114.1"	"129.6"	""	"792"	"66"	"35.000"	"28.000"	"1.11351272883798E-05"	"25"	"0"	"9.993E-07"	"1.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"864.50684"	"1728.00640"	"1728.00560"	"0.46"	"0.00040"	"11/114"	"11"	"114"	"177846.4296875"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"72.2579"	"24383"	"24383"	"24358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"20.4"	""	"16.8"	""	"25.8"	""	"24.6"	"25.9"	""	"792"	"48"	"35.000"	"28.000"	"0.000572394149215388"	"24"	"0"	"5.286E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8507"	"0.0000"	"1"	"1"	"1"	"576.67389"	"1728.00711"	"1728.00560"	"0.87"	"0.00050"	"15/114"	"15"	"114"	"3244505.92950439"	"HCD"	"MS2"	"5.492848"	"83.3"	"100.000"	"72.1847"	"24323"	"24323"	"24304"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.5"	""	"114.1"	""	"112.2"	""	"140.6"	"0.5"	"128.7"	"160.6"	""	"797"	"67"	"36.000"	"29.000"	"7.45466832935772E-06"	"27"	"0"	"3.74E-07"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVAGNISDPGLQK"	"[K].aVAGNISDPGLQk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.50739"	"1728.00749"	"1728.00560"	"1.09"	"0.00094"	"8/114"	"8"	"114"	"270048.153564453"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"72.1338"	"24303"	"24303"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"29.3"	""	"23.1"	""	"32.7"	""	"32.5"	"32.4"	""	"819"	"42"	"36.000"	"29.000"	"0.0024280292041551"	"15"	"0"	"1.172E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.95685"	"1728.85599"	"1728.85767"	"-0.97"	"-0.00056"	"12/100"	"12"	"100"	"664221.00177002"	"HCD"	"MS2"	"10.27583"	"16.0"	"100.000"	"96.3526"	"34088"	"34088"	"34066"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"21.8"	""	"22.1"	""	"26.1"	""	"31.0"	"27.5"	""	"769"	"42"	"35.000"	"28.000"	"0.00227455448340469"	"15"	"0"	"6.256E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.95709"	"1728.85672"	"1728.85767"	"-0.55"	"-0.00032"	"12/100"	"12"	"100"	"859450.982666016"	"HCD"	"MS2"	"23.38223"	"16.7"	"100.000"	"96.0521"	"33999"	"33999"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"18.8"	""	"30.4"	""	"17.4"	""	"29.8"	"32.5"	""	"771"	"42"	"35.000"	"28.000"	"0.00237697373217601"	"15"	"0"	"7.93E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.95728"	"1728.85727"	"1728.85767"	"-0.23"	"-0.00013"	"14/100"	"14"	"100"	"985727.351989746"	"HCD"	"MS2"	"10.47803"	"17.2"	"100.000"	"96.3387"	"34114"	"34114"	"34100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.3"	""	"25.5"	""	"23.0"	""	"24.5"	""	"34.1"	"31.9"	""	"782"	"39"	"35.000"	"28.000"	"0.00525021099804905"	"15"	"0"	"7.767E-06"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLMER.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.9808"	"0.0000"	"1"	"1"	"1"	"576.95734"	"1728.85746"	"1728.85767"	"-0.12"	"-0.00007"	"13/100"	"13"	"100"	"994610.748474121"	"HCD"	"MS2"	"10.7862"	"17.5"	"100.000"	"96.0201"	"33954"	"33954"	"33929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"28.6"	""	"24.4"	""	"21.9"	""	"32.1"	"34.2"	""	"779"	"52"	"35.000"	"28.000"	"0.000245757885675035"	"17"	"0"	"6.1E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"864.94574"	"1728.88420"	"1728.88786"	"-2.11"	"-0.00183"	"7/102"	"7"	"102"	"144543.148620605"	"HCD"	"MS2"	"23.72513"	"11.9"	"100.000"	"73.0580"	"24708"	"24708"	"24680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.8"	""	"18.1"	""	"15.9"	""	"25.7"	""	"21.6"	"15.2"	""	"854"	"38"	"36.000"	"29.000"	"0.00681440395870085"	"15"	"0.0001991"	"0.005139"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"864.94647"	"1728.88567"	"1728.88786"	"-1.27"	"-0.00110"	"8/102"	"8"	"102"	"136535.523498535"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"73.1562"	"24718"	"24718"	"24698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"10.6"	""	"13.3"	""	"12.8"	""	"20.9"	"15.9"	""	"870"	"48"	"36.000"	"29.000"	"0.00064489536703849"	"17"	"9.9E-05"	"0.0004149"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDDAVVQSDMK"	"[R].fDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M10(Oxidation); K11(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"864.94696"	"1728.88664"	"1728.88786"	"-0.70"	"-0.00061"	"6/102"	"6"	"102"	"91655.7571411133"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"73.3921"	"24844"	"24844"	"24819"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"5.4"	""	"6.0"	""	"10.8"	""	"15.0"	"13.9"	""	"870"	"23"	"36.000"	"29.000"	"0.221049357513844"	"15"	"0.0001991"	"0.005052"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETRPEGGYFSK"	"[K].eTRPEGGYFSk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.98169"	"1728.93052"	"1728.93211"	"-0.92"	"-0.00053"	"6/114"	"6"	"114"	"2543967.15289307"	"HCD"	"MS2"	"25.97796"	"132.4"	"100.000"	"45.4524"	"13511"	"13511"	"13480"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"177.4"	""	"150.3"	""	"151.2"	""	"218.6"	"3.2"	"269.4"	"286.9"	""	"976"	"6"	"36.000"	"29.000"	"12.3999468030806"	"13"	"0.001453"	"0.01188"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETRPEGGYFSK"	"[K].eTRPEGGYFSk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"576.98199"	"1728.93143"	"1728.93211"	"-0.39"	"-0.00022"	"5/114"	"5"	"114"	"3479945.96343994"	"HCD"	"MS2"	"31.75558"	"185.2"	"100.000"	"45.7160"	"13584"	"13584"	"13557"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"232.0"	""	"200.4"	""	"200.0"	""	"327.6"	"3.6"	"388.8"	"407.8"	""	"978"	"8"	"36.000"	"29.000"	"7.26622529078346"	"13"	"0.0007633"	"0.007245"	"0.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPESIPSLEALAR"	"[K].mAPESIPSLEALAR.[K]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"865.47113"	"1729.93498"	"1729.93559"	"-0.35"	"-0.00030"	"4/116"	"4"	"116"	"83980.3012084961"	"HCD"	"MS2"	"14.04745"	"5.2"	"100.000"	"106.1334"	"38049"	"38049"	"38031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.1"	""	"5.3"	""	"6.0"	""	"14.2"	""	"7.2"	"9.5"	""	"1151"	"10"	"37.000"	"30.000"	"6.28123913626261"	"14"	"0.004672"	"0.05506"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"SLSNVGDPEIIK"	"[].sLSNVGDPEIIk.[]"	"N-Term(TMT6plex); K12(TMT6plex)"	"0"	"0"	""	""	""	""	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"865.50708"	"1730.00688"	"1730.01002"	"-1.81"	"-0.00157"	"7/120"	"7"	"120"	"126751.545227051"	"HCD"	"MS2"	"41.52913"	"11.7"	"100.000"	"94.9359"	"33514"	"33514"	"33490"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.9"	""	"13.8"	""	"13.7"	""	"18.2"	""	"26.8"	"21.4"	""	"773"	"7"	"35.000"	"28.000"	"8.18746578773546"	"13"	"0.00329"	"0.03557"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MINLSVPDTIDER"	"[K].mINLSVPDTIDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"866.45935"	"1731.91142"	"1731.91485"	"-1.98"	"-0.00171"	"7/130"	"7"	"130"	"196709.71484375"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"110.3206"	"39637"	"39637"	"39607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"11.5"	"1.8"	"9.0"	""	"13.5"	""	"18.5"	"18.3"	""	"1045"	"58"	"37.000"	"30.000"	"8.26202100518776E-05"	"23"	"0"	"2.872E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MINLSVPDTIDER"	"[K].mINLSVPDTIDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"577.97607"	"1731.91367"	"1731.91485"	"-0.68"	"-0.00039"	"10/130"	"10"	"130"	"260007.273071289"	"HCD"	"MS2"	"8.047321"	"7.4"	"100.000"	"110.3900"	"39665"	"39665"	"39639"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"8.7"	""	"12.1"	""	"9.3"	""	"14.5"	"13.1"	""	"1062"	"25"	"37.000"	"30.000"	"0.15173805785321"	"21"	"0"	"0.0002029"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MINLSVPDTIDER"	"[K].mINLSVPDTIDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"577.97620"	"1731.91404"	"1731.91485"	"-0.47"	"-0.00027"	"10/130"	"10"	"130"	"218675.254516602"	"HCD"	"MS2"	"9.339033"	"7.0"	"100.000"	"110.5287"	"39735"	"39735"	"39708"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"9.4"	""	"13.4"	""	"9.9"	""	"10.0"	"11.1"	""	"1053"	"22"	"37.000"	"30.000"	"0.31433907838639"	"16"	"0.0001686"	"0.001932"	"0.389"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MINLSVPDTIDER"	"[K].mINLSVPDTIDER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"866.46075"	"1731.91423"	"1731.91485"	"-0.36"	"-0.00031"	"9/130"	"9"	"130"	"147824.661743164"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"110.4849"	"39717"	"39717"	"39692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.7"	""	"7.9"	""	"8.7"	""	"9.2"	""	"13.2"	"14.4"	""	"1057"	"44"	"37.000"	"30.000"	"0.00213818358762099"	"27"	"0"	"0.0001165"	"0.64"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDADSLYVEK"	"[K].hPDADSLYVEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"0.8148"	"0.0000"	"1"	"1"	"1"	"577.98163"	"1731.93033"	"1731.93177"	"-0.83"	"-0.00048"	"10/94"	"10"	"94"	"991692.841918945"	"HCD"	"MS2"	"11.66202"	"42.7"	"100.000"	"54.7878"	"17267"	"17267"	"17241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.0"	""	"53.5"	""	"62.2"	""	"66.3"	""	"84.1"	"74.0"	""	"1074"	"27"	"37.000"	"30.000"	"0.111166590430079"	"19"	"0.0001991"	"0.003456"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPDADSLYVEK"	"[K].hPDADSLYVEk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"Q4KM49"	"Tyrosine--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Yars PE=2 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"577.98187"	"1731.93106"	"1731.93177"	"-0.41"	"-0.00024"	"9/94"	"9"	"94"	"1173673.82635498"	"HCD"	"MS2"	"27.11498"	"47.6"	"100.000"	"54.4957"	"17182"	"17182"	"17157"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.5"	""	"57.5"	""	"63.3"	""	"72.6"	""	"104.6"	"91.1"	""	"1049"	"34"	"37.000"	"30.000"	"0.0214657216028391"	"22"	"0.0001991"	"0.002016"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"866.48792"	"1731.96855"	"1731.97153"	"-1.72"	"-0.00149"	"7/106"	"7"	"106"	"89423.128112793"	"HCD"	"MS2"	"100"	"5.0"	"100.000"	"70.3907"	"23631"	"23631"	"23604"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.7"	""	"6.7"	""	"6.9"	""	"12.5"	""	"8.1"	"5.7"	""	"1048"	"9"	"37.000"	"30.000"	"7.00376050670335"	"13"	"0.0005161"	"0.006693"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"866.48926"	"1731.97124"	"1731.97153"	"-0.17"	"-0.00014"	"4/106"	"4"	"106"	"72692.9792480469"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"70.2461"	"23539"	"23539"	"23512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.4"	""	"6.6"	""	"4.7"	""	"7.2"	""	"8.0"	"8.3"	""	"1055"	"3"	"37.000"	"30.000"	"26.9291387487027"	"13"	"0.002588"	"0.02613"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"2"	"2"	"0.9583"	"0.0000"	"1"	"1"	"1"	"866.48993"	"1731.97258"	"1731.97153"	"0.61"	"0.00053"	"5/106"	"5"	"106"	"123547.43170166"	"HCD"	"MS2"	"19.12196"	"9.3"	"100.000"	"70.5504"	"23662"	"23662"	"23638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"10.4"	""	"11.4"	""	"23.5"	""	"15.1"	"14.4"	""	"1044"	"24"	"37.000"	"30.000"	"0.230499773518429"	"15"	"0.0001686"	"0.001568"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLAVAGPEMQVK"	"[R].dLAVAGPEmQVk.[L]"	"N-Term(TMT6plex); M9(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"577.99591"	"1731.97318"	"1731.97153"	"0.95"	"0.00055"	"11/106"	"11"	"106"	"616315.245422363"	"HCD"	"MS2"	"18.55452"	"23.5"	"100.000"	"70.5964"	"23681"	"23681"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"28.7"	""	"37.4"	""	"43.1"	""	"44.7"	"41.5"	""	"1044"	"54"	"37.000"	"30.000"	"0.000212163417824241"	"25"	"0"	"9.146E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESEVLIGNLGDK"	"[K].eSEVLIGNLGDk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"Q62824"	"Exocyst complex component 4 OS=Rattus norvegicus OX=10116 GN=Exoc4 PE=1 SV=1"	"0"	"2"	"2"	"0.5882"	"0.0000"	"1"	"1"	"1"	"866.49817"	"1731.98906"	"1731.98929"	"-0.13"	"-0.00011"	"5/116"	"5"	"116"	"73102.6561889648"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"99.0677"	"35216"	"35216"	"35186"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"6.0"	""	"8.2"	""	"10.7"	""	"6.6"	"10.3"	""	"963"	"17"	"36.000"	"29.000"	"0.862176718717994"	"20"	"0.004114"	"0.04488"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNEQASEEILK"	"[R].lNEQASEEILk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"866.49896"	"1731.99065"	"1731.98929"	"0.79"	"0.00068"	"8/108"	"8"	"108"	"106129.532226563"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"88.8072"	"31081"	"31081"	"31052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"10.6"	""	"12.2"	""	"16.9"	"1.6"	"17.3"	"26.0"	""	"957"	"25"	"36.000"	"29.000"	"0.139598882619956"	"18"	"0.001615"	"0.01343"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].GTFAHLSELHcDk.[L]"	"C11(Methylthio); K13(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"433.96378"	"1732.83327"	"1732.83483"	"-0.90"	"-0.00039"	"6/116"	"6"	"116"	"1345809.57244873"	"HCD"	"MS2"	"31.3519"	"45.2"	"100.000"	"68.7097"	"22914"	"22914"	"22899"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"61.3"	""	"54.7"	""	"65.3"	""	"96.5"	"103.5"	""	"571"	"22"	"34.000"	"27.000"	"0.180138321849095"	"14"	"0.001951"	"0.01728"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTFAHLSELHCDK"	"[K].GTFAHLSELHcDk.[L]"	"C11(Methylthio); K13(TMT6plex)"	"1"	"2"	"P02091"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3"	"P02091; P11517"	"Hemoglobin subunit beta-1 OS=Rattus norvegicus OX=10116 GN=Hbb PE=1 SV=3; Hemoglobin subunit beta-2 OS=Rattus norvegicus OX=10116 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"433.96381"	"1732.83339"	"1732.83483"	"-0.83"	"-0.00036"	"6/116"	"6"	"116"	"1434818.63031006"	"HCD"	"MS2"	"30.78092"	"45.9"	"100.000"	"68.7802"	"22976"	"22976"	"22954"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.1"	""	"50.0"	""	"60.5"	""	"80.6"	""	"94.9"	"93.9"	""	"571"	"15"	"34.000"	"27.000"	"0.971865381596359"	"13"	"0.001872"	"0.01579"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDANTDLIGGSPK"	"[K].sDANTDLIGGSPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.1429"	"0.0000"	"1"	"1"	"1"	"866.97675"	"1732.94621"	"1732.94815"	"-1.12"	"-0.00097"	"9/134"	"9"	"134"	"170772.440307617"	"HCD"	"MS2"	"35.07178"	"15.2"	"100.000"	"62.3995"	"20387"	"20387"	"20361"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"18.5"	""	"15.8"	""	"27.7"	""	"35.7"	"28.9"	""	"1173"	"14"	"37.000"	"30.000"	"2.45622425941659"	"26"	"0.002373"	"0.02252"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDANTDLIGGSPK"	"[K].sDANTDLIGGSPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"866.97729"	"1732.94731"	"1732.94815"	"-0.48"	"-0.00042"	"6/134"	"6"	"134"	"186751.806152344"	"HCD"	"MS2"	"100"	"15.5"	"100.000"	"62.4518"	"20375"	"20375"	"20349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.9"	""	"14.4"	""	"17.4"	""	"25.9"	""	"35.8"	"29.9"	""	"1168"	"20"	"37.000"	"30.000"	"0.536306236346411"	"19"	"0.004073"	"0.04435"	"0.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDANTDLIGGSPK"	"[K].sDANTDLIGGSPk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"P53987"	"Monocarboxylate transporter 1 OS=Rattus norvegicus OX=10116 GN=Slc16a1 PE=1 SV=1"	"0"	"3"	"3"	"0.5814"	"0.0000"	"1"	"1"	"1"	"578.32111"	"1732.94876"	"1732.94815"	"0.35"	"0.00021"	"13/134"	"13"	"134"	"1312662.07727051"	"HCD"	"MS2"	"19.69427"	"45.8"	"100.000"	"62.3166"	"20353"	"20353"	"20329"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.7"	""	"49.4"	""	"56.8"	""	"75.5"	""	"91.2"	"94.2"	""	"1185"	"43"	"37.000"	"30.000"	"0.00280342120934677"	""	"0"	"3.51E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8448"	"0.0000"	"1"	"1"	"1"	"578.66046"	"1733.96683"	"1733.96855"	"-0.99"	"-0.00057"	"13/122"	"13"	"122"	"1939181.76568604"	"HCD"	"MS2"	"54.13522"	"50.0"	"100.000"	"95.1760"	"33611"	"33611"	"33592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"53.8"	""	"73.5"	""	"77.2"	"2.0"	"94.8"	"81.1"	""	"1068"	"58"	"37.000"	"30.000"	"8.90310011502266E-05"	"25"	"0"	"2.5E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"867.48706"	"1733.96684"	"1733.96855"	"-0.98"	"-0.00085"	"18/122"	"18"	"122"	"271855.39263916"	"HCD"	"MS2"	"23.84472"	"22.2"	"100.000"	"95.1112"	"33585"	"33585"	"33562"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.6"	""	"24.4"	""	"29.1"	""	"38.9"	""	"45.4"	"37.3"	""	"1067"	"56"	"37.000"	"30.000"	"0.000142933630129095"	"24"	"0"	"7.514E-06"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"867.48712"	"1733.96697"	"1733.96855"	"-0.91"	"-0.00079"	"7/122"	"7"	"122"	"172426.93170166"	"HCD"	"MS2"	"18.98404"	"13.0"	"100.000"	"95.4131"	"33740"	"33740"	"33724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.3"	""	"12.2"	""	"21.1"	""	"20.0"	""	"25.3"	"23.8"	""	"1067"	"29"	"37.000"	"30.000"	"0.0644368681029467"	"16"	"0"	"0.0003046"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"578.66058"	"1733.96720"	"1733.96855"	"-0.78"	"-0.00045"	"13/122"	"13"	"122"	"1629360.04388428"	"HCD"	"MS2"	"62.41774"	"42.6"	"100.000"	"95.1641"	"33640"	"33640"	"33623"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.6"	""	"43.1"	""	"63.8"	""	"71.0"	""	"84.6"	"71.7"	""	"1066"	"56"	"37.000"	"30.000"	"0.00013795174837766"	"24"	"0"	"7.009E-07"	"1.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"867.48804"	"1733.96880"	"1733.96855"	"0.14"	"0.00012"	"4/122"	"4"	"122"	"100067.10168457"	"HCD"	"MS2"	"14.89467"	"7.2"	"100.000"	"95.4731"	"33732"	"33732"	"33711"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"6.4"	""	"9.1"	""	"17.3"	""	"14.5"	"11.3"	""	"1069"	"11"	"37.000"	"30.000"	"4.07331230858583"	"17"	"0.002525"	"0.02387"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNASDALDK"	"[R].eLISNASDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"2"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2;Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"Q66HD0; P34058"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2; Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"867.48871"	"1733.97014"	"1733.96855"	"0.92"	"0.00079"	"6/122"	"6"	"122"	"253204.923156738"	"HCD"	"MS2"	"0"	"20.0"	"100.000"	"95.1154"	"33620"	"33620"	"33591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.7"	""	"27.4"	""	"22.1"	""	"38.4"	""	"30.4"	"36.2"	""	"1052"	"37"	"37.000"	"30.000"	"0.0116946100248264"	"22"	"0"	"0.0002491"	"0.572"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91937"	"1734.83147"	"1734.83250"	"-0.60"	"-0.00052"	"6/116"	"6"	"116"	"306617.931213379"	"HCD"	"MS2"	"0"	"7.5"	"100.000"	"103.5168"	"37002"	"37002"	"36985"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"8.6"	""	"8.1"	""	"11.2"	""	"15.2"	"10.9"	""	"555"	"22"	"34.000"	"27.000"	"0.169927233703625"	"14"	"9.9E-05"	"0.0007382"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94873"	"1734.83164"	"1734.83250"	"-0.50"	"-0.00029"	"7/116"	"7"	"116"	"943659.240966797"	"HCD"	"MS2"	"12.14239"	"13.6"	"100.000"	"103.1501"	"36841"	"36841"	"36823"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"17.9"	""	"18.1"	""	"19.3"	""	"31.8"	"21.5"	""	"558"	"8"	"34.000"	"27.000"	"4.0142480333338"	"13"	"0"	"0.0002846"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91962"	"1734.83196"	"1734.83250"	"-0.31"	"-0.00027"	"7/116"	"7"	"116"	"219268.097045898"	"HCD"	"MS2"	"9.620001"	"8.6"	"100.000"	"103.3176"	"36905"	"36905"	"36883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"9.5"	""	"14.7"	""	"13.3"	""	"12.9"	"17.8"	""	"558"	"18"	"34.000"	"27.000"	"0.450406037354589"	"14"	"0.0001686"	"0.001179"	"0.433"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.91974"	"1734.83220"	"1734.83250"	"-0.17"	"-0.00015"	"7/116"	"7"	"116"	"1944190.81774902"	"HCD"	"MS2"	"0"	"24.7"	"100.000"	"103.2157"	"36886"	"36886"	"36873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.6"	""	"34.4"	""	"40.3"	""	"26.1"	""	"42.7"	"43.5"	""	"562"	"24"	"34.000"	"27.000"	"0.112384474682868"	"14"	"9.9E-05"	"0.0008294"	"0.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94897"	"1734.83237"	"1734.83250"	"-0.08"	"-0.00004"	"7/116"	"7"	"116"	"898526.000549316"	"HCD"	"MS2"	"8.275629"	"14.4"	"100.000"	"103.0611"	"36826"	"36826"	"36810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"22.3"	""	"19.2"	""	"21.5"	""	"27.8"	"30.1"	""	"565"	"10"	"34.000"	"27.000"	"3.01313404247548"	"13"	"0"	"0.0001887"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94910"	"1734.83274"	"1734.83250"	"0.14"	"0.00008"	"7/116"	"7"	"116"	"1011510.17828369"	"HCD"	"MS2"	"17.30139"	"16.5"	"100.000"	"102.8595"	"36723"	"36723"	"36699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"26.6"	""	"27.1"	""	"20.1"	""	"33.7"	"27.4"	""	"563"	"7"	"34.000"	"27.000"	"5.57799857764135"	"13"	"0"	"0.0002528"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"578.94910"	"1734.83274"	"1734.83250"	"0.14"	"0.00008"	"7/116"	"7"	"116"	"976047.342712402"	"HCD"	"MS2"	"10.09318"	"13.6"	"100.000"	"103.3749"	"36945"	"36945"	"36927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"17.4"	""	"16.2"	""	"23.4"	""	"23.5"	"27.0"	""	"563"	"13"	"34.000"	"27.000"	"1.51522943778335"	"13"	"0"	"0.0002886"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.92010"	"1734.83293"	"1734.83250"	"0.25"	"0.00022"	"7/116"	"7"	"116"	"1984976.42138672"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"102.9958"	"36779"	"36779"	"36762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.9"	""	"45.7"	""	"41.2"	""	"27.8"	""	"45.1"	"43.7"	""	"563"	"27"	"34.000"	"27.000"	"0.0594947164714015"	"14"	"9.9E-05"	"0.0005141"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.92059"	"1734.83391"	"1734.83250"	"0.81"	"0.00070"	"7/116"	"7"	"116"	"208486.909240723"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"102.7142"	"36664"	"36664"	"36638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.0"	""	"2.8"	""	"6.7"	""	"6.3"	""	"7.1"	"7.3"	""	"571"	"22"	"34.000"	"27.000"	"0.16928018016759"	"14"	"9.9E-05"	"0.0009777"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DAGHPLYPFNDPY"	"[R].dAGHPLYPFNDPY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"867.92096"	"1734.83464"	"1734.83250"	"1.23"	"0.00107"	"5/116"	"5"	"116"	"212824.89440918"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"102.9294"	"36773"	"36773"	"36746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"5.0"	""	"7.9"	""	"4.3"	""	"9.1"	"10.6"	""	"575"	"17"	"34.000"	"27.000"	"0.631884713425637"	"14"	"0.0001991"	"0.00324"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"0.8077"	"0.0000"	"1"	"1"	"1"	"867.94061"	"1734.87395"	"1734.87476"	"-0.47"	"-0.00041"	"9/112"	"9"	"112"	"100038.576171875"	"HCD"	"MS2"	"10.93798"	"5.6"	"100.000"	"107.2928"	"38486"	"38486"	"38470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"5.4"	""	"6.9"	""	"7.1"	""	"8.4"	"6.5"	""	"826"	"26"	"36.000"	"29.000"	"0.105426563799909"	"19"	"0.0001991"	"0.002126"	"0.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"867.94061"	"1734.87395"	"1734.87476"	"-0.47"	"-0.00041"	"6/112"	"6"	"112"	"104013.785095215"	"HCD"	"MS2"	"16.05611"	"3.9"	"100.000"	"107.5321"	"38598"	"38598"	"38581"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"3.3"	""	"4.9"	""	"5.4"	""	"5.1"	"4.3"	""	"826"	"3"	"36.000"	"29.000"	"18.6187298975623"	"13"	"0.009239"	"0.1188"	"0.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGVEFDEITPDDR"	"[K].lGVEFDEITPDDR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"P70623"	"Fatty acid-binding protein, adipocyte OS=Rattus norvegicus OX=10116 GN=Fabp4 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"867.94067"	"1734.87407"	"1734.87476"	"-0.40"	"-0.00034"	"4/112"	"4"	"112"	"71107.9684448242"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"107.8019"	"38699"	"38699"	"38690"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.1"	""	"1.4"	""	"3.1"	""	"3.7"	""	"5.0"	"3.7"	""	"825"	"3"	"36.000"	"29.000"	"22.6164248029852"	"14"	"0.008792"	"0.1118"	"0.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.4483"	"0.0000"	"1"	"1"	"1"	"579.32867"	"1735.97147"	"1735.97297"	"-0.86"	"-0.00050"	"11/96"	"11"	"96"	"4913735.00299072"	"HCD"	"MS2"	"10.92673"	"97.9"	"100.000"	"100.9763"	"35989"	"35989"	"35977"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.2"	""	"95.3"	""	"117.0"	""	"187.1"	"2.5"	"207.2"	"207.6"	""	"1090"	"29"	"37.000"	"30.000"	"0.066282137035227"	"30"	"0.0001991"	"0.005609"	"0.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.5484"	"0.0000"	"1"	"1"	"1"	"579.32880"	"1735.97184"	"1735.97297"	"-0.65"	"-0.00038"	"10/96"	"10"	"96"	"2747677.10913086"	"HCD"	"MS2"	"9.133673"	"65.9"	"100.000"	"100.7059"	"35879"	"35879"	"35862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.8"	""	"64.6"	""	"86.3"	""	"136.2"	""	"138.4"	"127.3"	""	"1089"	"31"	"37.000"	"30.000"	"0.0400864764585884"	"28"	"0"	"0.0002145"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"579.32880"	"1735.97184"	"1735.97297"	"-0.65"	"-0.00038"	"12/96"	"12"	"96"	"4524368.26208496"	"HCD"	"MS2"	"14.13577"	"86.5"	"100.000"	"100.8685"	"35917"	"35917"	"35906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"107.0"	""	"85.5"	""	"104.7"	""	"179.6"	""	"170.7"	"174.2"	""	"1089"	"27"	"37.000"	"30.000"	"0.0974984887522219"	"25"	"0.0001991"	"0.002038"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"3"	"579.32898"	"1735.97239"	"1735.97297"	"-0.34"	"-0.00019"	"8/96"	"8"	"96"	"414942.350830078"	"HCD"	"MS2"	"12.87343"	"14.3"	"100.000"	"101.2839"	"36085"	"36085"	"36067"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"15.0"	""	"20.3"	""	"31.4"	""	"29.3"	"25.9"	""	"1091"	"6"	"37.000"	"30.000"	"12.4392660027623"	"19"	"0.00455"	"0.05331"	"0.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"868.48993"	"1735.97258"	"1735.97297"	"-0.22"	"-0.00019"	"10/96"	"10"	"96"	"587636.666809082"	"HCD"	"MS2"	"0"	"54.8"	"100.000"	"100.9830"	"35991"	"35991"	"35977"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.5"	""	"52.1"	""	"64.6"	""	"101.9"	"0.7"	"112.7"	"117.0"	""	"1084"	"78"	"37.000"	"30.000"	"9.18331087842454E-07"	""	"0"	"1.908E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.6571"	"0.0000"	"1"	"1"	"1"	"579.32910"	"1735.97275"	"1735.97297"	"-0.12"	"-0.00007"	"13/96"	"13"	"96"	"2954996.07067871"	"HCD"	"MS2"	"8.990509"	"71.9"	"100.000"	"100.5916"	"35805"	"35805"	"35787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.4"	""	"72.9"	""	"87.5"	""	"152.8"	""	"135.6"	"147.2"	""	"1078"	"35"	"37.000"	"30.000"	"0.0175222053290749"	"27"	"0"	"0.0002133"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.8056"	"0.0000"	"1"	"1"	"1"	"868.49036"	"1735.97344"	"1735.97297"	"0.27"	"0.00023"	"18/96"	"18"	"96"	"770982.332275391"	"HCD"	"MS2"	"0"	"65.9"	"100.000"	"100.8409"	"35907"	"35907"	"35895"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.4"	""	"62.3"	""	"78.4"	""	"125.9"	""	"129.6"	"152.8"	""	"1077"	"72"	"37.000"	"30.000"	"3.37431566126053E-06"	""	"0"	"3.077E-07"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"868.49042"	"1735.97356"	"1735.97297"	"0.34"	"0.00030"	"17/96"	"17"	"96"	"506493.075744629"	"HCD"	"MS2"	"0"	"46.4"	"100.000"	"100.6897"	"35873"	"35873"	"35848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.1"	""	"42.1"	""	"60.9"	""	"95.0"	"0.7"	"90.4"	"93.4"	""	"1074"	"68"	"37.000"	"30.000"	"8.14656047325664E-06"	""	"0"	"1.413E-07"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDELLETSLK"	"[K].tEDELLETSLk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"868.49097"	"1735.97466"	"1735.97297"	"0.97"	"0.00084"	"7/96"	"7"	"96"	"378583.419311523"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"100.5663"	"35795"	"35795"	"35771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.0"	""	"39.8"	""	"41.0"	""	"79.6"	""	"66.4"	"81.9"	""	"1064"	"29"	"37.000"	"30.000"	"0.0725958228665308"	"21"	"0"	"0.0003848"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGDDLDPNYVLSSR"	"[K].gGDDLDPNYVLSSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"P00564"	"Creatine kinase M-type OS=Rattus norvegicus OX=10116 GN=Ckm PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"868.93524"	"1736.86321"	"1736.86526"	"-1.18"	"-0.00103"	"13/136"	"13"	"136"	"202379.534484863"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"88.2625"	"30821"	"30821"	"30802"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"6.5"	""	"8.4"	""	"3.0"	""	"5.6"	"57.8"	""	"762"	"36"	"35.000"	"28.000"	"0.0101373624778335"	"16"	"9.9E-05"	"0.0004179"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTmER.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"579.63214"	"1736.88187"	"1736.88389"	"-1.16"	"-0.00067"	"7/118"	"7"	"118"	"860868.198059082"	"HCD"	"MS2"	"28.96933"	"20.1"	"100.000"	"62.2058"	"20308"	"20308"	"20281"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.2"	""	"24.2"	""	"26.3"	""	"38.7"	""	"40.9"	"33.0"	""	"925"	"21"	"36.000"	"29.000"	"0.331979859713005"	"16"	"0.0001991"	"0.003005"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTmER.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"579.63257"	"1736.88315"	"1736.88389"	"-0.42"	"-0.00024"	"9/118"	"9"	"118"	"941877.566894531"	"HCD"	"MS2"	"8.197358"	"27.6"	"100.000"	"62.2189"	"20280"	"20280"	"20256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.3"	""	"37.9"	""	"36.9"	""	"49.0"	""	"49.6"	"52.1"	""	"958"	"19"	"36.000"	"29.000"	"0.5474387223643"	"19"	"0.0001991"	"0.004468"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIVHSGLAYTMER"	"[K].dIVHSGLAYTmER.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"579.63263"	"1736.88333"	"1736.88389"	"-0.32"	"-0.00018"	"8/118"	"8"	"118"	"903936.16809082"	"HCD"	"MS2"	"23.19011"	"20.0"	"100.000"	"61.7937"	"20141"	"20141"	"20118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.8"	""	"25.3"	""	"20.7"	""	"42.1"	"0.8"	"35.8"	"38.7"	""	"958"	"43"	"36.000"	"29.000"	"0.0022559813934414"	"22"	"0"	"0.0002709"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEYFGVTDGAGDH"	"[K].lQEYFGVTDGAGDH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.41656"	"1737.82585"	"1737.82814"	"-1.32"	"-0.00115"	"9/124"	"9"	"124"	"82459.3910522461"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"103.6829"	"37053"	"37053"	"37026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.6"	""	"4.6"	""	"5.8"	""	"4.1"	""	"4.4"	"7.2"	""	"492"	"32"	"33.000"	"26.000"	"0.01697989917447"	"14"	"0.0001991"	"0.00271"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQEYFGVTDGAGDH"	"[K].lQEYFGVTDGAGDH.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"D3ZW55"	"Inosine triphosphate pyrophosphatase OS=Rattus norvegicus OX=10116 GN=Itpa PE=3 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.41718"	"1737.82707"	"1737.82814"	"-0.62"	"-0.00054"	"5/124"	"5"	"124"	"48830.5516967773"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"104.0314"	"37210"	"37210"	"37195"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.9"	""	"3.4"	""	"4.3"	""	"1.9"	""	"5.7"	"7.1"	""	"503"	"9"	"34.000"	"27.000"	"3.05870779162561"	"13"	"0.003208"	"0.03459"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGFLPTTPSEQR"	"[K].eFGFLPTTPSEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"869.45416"	"1737.90105"	"1737.90092"	"0.08"	"0.00007"	"5/118"	"5"	"118"	"118159.950439453"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"102.4835"	"36595"	"36595"	"36566"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"5.1"	""	"7.5"	""	"12.6"	""	"13.8"	"14.0"	""	"1043"	"31"	"37.000"	"30.000"	"0.0406681402637879"	"17"	"9.9E-05"	"0.0005096"	"0.508"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFGFLPTTPSEQR"	"[K].eFGFLPTTPSEQR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"O70257"	"Syntaxin-7 OS=Rattus norvegicus OX=10116 GN=Stx7 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.45435"	"1737.90141"	"1737.90092"	"0.29"	"0.00025"	"5/118"	"5"	"118"	"89530.1032714844"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"102.4649"	"36563"	"36563"	"36543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.5"	""	"5.3"	""	"7.3"	""	"14.6"	""	"13.1"	"11.8"	""	"1042"	"3"	"37.000"	"30.000"	"24.9366278100095"	"13"	"0.004959"	"0.06273"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.46014"	"1737.91301"	"1737.91718"	"-2.40"	"-0.00209"	"13/112"	"13"	"112"	"288129.355529785"	"HCD"	"MS2"	"100"	"27.1"	"100.000"	"58.3510"	"18746"	"18746"	"18715"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.4"	""	"22.9"	""	"27.8"	""	"62.6"	""	"60.1"	"49.8"	""	"1125"	"24"	"37.000"	"30.000"	"0.201429245870233"	"14"	"0"	"0.0001621"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"869.46198"	"1737.91667"	"1737.91718"	"-0.29"	"-0.00026"	"9/112"	"9"	"112"	"1032357.8614502"	"HCD"	"MS2"	"0"	"94.0"	"100.000"	"58.6666"	"18874"	"18874"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"145.3"	""	"82.5"	""	"93.5"	""	"189.4"	"2.0"	"179.4"	"199.8"	""	"1121"	"57"	"37.000"	"30.000"	"0.000120109018192779"	"22"	"0"	"4.037E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"0.9688"	"0.0000"	"1"	"1"	"1"	"869.46228"	"1737.91728"	"1737.91718"	"0.06"	"0.00005"	"18/112"	"18"	"112"	"1127299.6159668"	"HCD"	"MS2"	"0"	"106.1"	"100.000"	"58.9061"	"18936"	"18936"	"18917"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.8"	""	"99.2"	""	"103.9"	""	"207.6"	""	"218.9"	"217.1"	""	"1129"	"64"	"37.000"	"30.000"	"2.34241557067098E-05"	"18"	"0"	"2.685E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NFSDNQLQEGK"	"[R].nFSDNQLQEGk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"Q5XFX0"	"Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"869.46301"	"1737.91875"	"1737.91718"	"0.90"	"0.00078"	"11/112"	"11"	"112"	"207013.562683105"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"58.5997"	"18812"	"18812"	"18782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"20.1"	""	"17.9"	""	"40.4"	""	"34.3"	"38.5"	""	"1123"	"22"	"37.000"	"30.000"	"0.381372839714549"	"14"	"0.0001686"	"0.001404"	"0.418"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGEHMEEHGIK"	"[K].iGEHMEEHGIk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"O89049"	"Thioredoxin reductase 1, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Txnrd1 PE=1 SV=5"	"0"	"4"	"4"	"0.7200"	"0.0000"	"1"	"1"	"1"	"435.23901"	"1737.93422"	"1737.93581"	"-0.91"	"-0.00040"	"12/88"	"12"	"88"	"5515070.34057617"	"HCD"	"MS2"	"23.8993"	"178.6"	"100.000"	"40.4917"	"11461"	"11461"	"11448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"303.0"	""	"242.3"	""	"258.1"	""	"257.7"	"3.5"	"309.0"	"316.7"	""	"1174"	"25"	"37.000"	"30.000"	"0.197077979560615"	"21"	"0"	"5.782E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.8769"	"0.0000"	"1"	"1"	"1"	"580.00110"	"1737.98874"	"1737.98995"	"-0.70"	"-0.00040"	"10/112"	"10"	"112"	"9094005.93041992"	"HCD"	"MS2"	"16.3565"	"183.8"	"100.000"	"62.6368"	"20484"	"20484"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"254.8"	""	"266.8"	""	"279.1"	""	"320.8"	"0.8"	"315.2"	"301.6"	""	"980"	"65"	"36.000"	"29.000"	"1.51424476193166E-05"	"24"	"0"	"8.052E-08"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"4"	"4"	"0.7778"	"0.0000"	"1"	"1"	"1"	"435.25272"	"1737.98903"	"1737.98995"	"-0.53"	"-0.00023"	"12/112"	"12"	"112"	"1156739.64056396"	"HCD"	"MS2"	"16.42685"	"40.4"	"100.000"	"62.6619"	"20494"	"20494"	"20468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.5"	""	"60.1"	""	"63.1"	""	"62.8"	"0.2"	"70.3"	"66.1"	""	"978"	"18"	"36.000"	"29.000"	"0.710082581000406"	"18"	"0.0001686"	"0.001281"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.8596"	"0.0000"	"1"	"1"	"1"	"580.00134"	"1737.98948"	"1737.98995"	"-0.28"	"-0.00016"	"13/112"	"13"	"112"	"2011711.80834961"	"HCD"	"MS2"	"15.33327"	"54.2"	"100.000"	"63.0391"	"20614"	"20614"	"20593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.1"	""	"67.3"	""	"82.7"	""	"84.8"	"0.1"	"101.9"	"96.9"	""	"975"	"57"	"36.000"	"29.000"	"9.83953602294761E-05"	"24"	"0"	"4.558E-07"	"1.136"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"580.00140"	"1737.98966"	"1737.98995"	"-0.17"	"-0.00010"	"10/112"	"10"	"112"	"2979362.0814209"	"HCD"	"MS2"	"39.9977"	"67.6"	"100.000"	"62.3580"	"20370"	"20370"	"20345"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.7"	""	"93.8"	""	"97.9"	""	"120.5"	""	"119.0"	"110.3"	""	"975"	"63"	"36.000"	"29.000"	"2.31725922647118E-05"	"24"	"0"	"1.001E-07"	"1.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"580.00146"	"1737.98984"	"1737.98995"	"-0.07"	"-0.00004"	"12/112"	"12"	"112"	"2404499.74700928"	"HCD"	"MS2"	"27.98203"	"57.9"	"100.000"	"62.3619"	"20338"	"20338"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.3"	""	"76.4"	""	"86.3"	""	"106.2"	"1.9"	"99.0"	"95.9"	""	"975"	"58"	"36.000"	"29.000"	"7.77991084277908E-05"	"24"	"0"	"1.056E-06"	"1.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.9206"	"0.0000"	"1"	"1"	"1"	"580.00153"	"1737.99002"	"1737.98995"	"0.04"	"0.00002"	"10/112"	"10"	"112"	"3221478.21179199"	"HCD"	"MS2"	"8.176872"	"76.8"	"100.000"	"62.9547"	"20612"	"20612"	"20592"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.7"	""	"113.8"	""	"123.8"	""	"118.8"	"0.9"	"123.1"	"135.7"	""	"975"	"63"	"36.000"	"29.000"	"2.58210928897183E-05"	"22"	"0"	"2.232E-07"	"1.199"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"4"	"4"	"0.4706"	"0.0000"	"1"	"1"	"1"	"435.25308"	"1737.99050"	"1737.98995"	"0.31"	"0.00014"	"11/112"	"11"	"112"	"1224578.67089844"	"HCD"	"MS2"	"16.58579"	"41.8"	"100.000"	"62.6452"	"20454"	"20454"	"20427"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.2"	""	"55.3"	""	"69.3"	""	"70.1"	""	"75.3"	"73.8"	""	"973"	"17"	"36.000"	"29.000"	"1.05458804699478"	"23"	"0"	"0.0002575"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEHPGLSIGDVAK"	"[K].gEHPGLSIGDVAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"P63159"	"High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2"	"0"	"3"	"3"	"0.8955"	"0.0000"	"1"	"1"	"1"	"580.00171"	"1737.99057"	"1737.98995"	"0.36"	"0.00021"	"9/112"	"9"	"112"	"8927165.22650146"	"HCD"	"MS2"	"16.08257"	"178.6"	"100.000"	"62.6590"	"20459"	"20459"	"20443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"239.0"	""	"251.8"	""	"274.4"	""	"307.9"	""	"329.6"	"291.9"	""	"972"	"67"	"36.000"	"29.000"	"8.86413311327344E-06"	"24"	"0"	"4.264E-08"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGQMTDQVADLR"	"[K].mLGQmTDQVADLR.[A]"	"N-Term(TMT6plex); M1(Oxidation); M5(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"869.93494"	"1738.86260"	"1738.86652"	"-2.26"	"-0.00196"	"7/124"	"7"	"124"	"70565.2612915039"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"61.3693"	"19971"	"19971"	"19946"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.7"	""	"3.1"	""	"5.5"	""	"6.8"	""	"3.6"	"5.5"	""	"792"	"8"	"35.000"	"28.000"	"6.96137751127642"	"14"	"0.008893"	"0.1151"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"869.94446"	"1738.88164"	"1738.88091"	"0.42"	"0.00037"	"5/138"	"5"	"138"	"123211.869262695"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"70.0151"	"23479"	"23479"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"11.7"	""	"12.3"	""	"18.0"	""	"16.8"	"19.0"	""	"930"	"14"	"36.000"	"29.000"	"1.8597430863891"	"16"	"0.0001991"	"0.004767"	"0.308"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDGVYEGVAIGGDR"	"[R].tTDGVYEGVAIGGDR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"P16638"	"ATP-citrate synthase OS=Rattus norvegicus OX=10116 GN=Acly PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"869.94476"	"1738.88225"	"1738.88091"	"0.77"	"0.00067"	"5/138"	"5"	"138"	"112532.216003418"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"69.8658"	"23384"	"23384"	"23358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"12.5"	""	"9.6"	""	"9.0"	""	"16.0"	"14.4"	""	"937"	"14"	"36.000"	"29.000"	"1.9847672959421"	"16"	"0.003043"	"0.03287"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNGGAAGGGLPVSTVR"	"[R].vPnGGAAGGGLPVSTVR.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P35426"	"Cyclin-dependent kinase 4 OS=Rattus norvegicus OX=10116 GN=Cdk4 PE=1 SV=1"	"P35426"	"Cyclin-dependent kinase 4 OS=Rattus norvegicus OX=10116 GN=Cdk4 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"869.98621"	"1738.96514"	"1738.96491"	"0.13"	"0.00011"	"3/158"	"3"	"158"	"84357.9835205078"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"78.8194"	"27041"	"27041"	"27015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.8"	""	"5.1"	""	"6.7"	""	"6.2"	""	"9.9"	"5.9"	""	"1098"	"7"	"37.000"	"30.000"	"10.2464245026823"	"15"	"0.003001"	"0.03229"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPNGGAAGGGLPVSTVR"	"[R].vPnGGAAGGGLPVSTVR.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"P35426"	"Cyclin-dependent kinase 4 OS=Rattus norvegicus OX=10116 GN=Cdk4 PE=1 SV=1"	"P35426"	"Cyclin-dependent kinase 4 OS=Rattus norvegicus OX=10116 GN=Cdk4 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"3"	"869.98737"	"1738.96745"	"1738.96491"	"1.46"	"0.00127"	"4/158"	"4"	"158"	"94216.0228881836"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"78.7597"	"26990"	"26990"	"26961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.3"	""	"7.0"	""	"4.8"	""	"7.7"	""	"6.3"	"7.5"	""	"1102"	"7"	"37.000"	"30.000"	"10.6696850213458"	"15"	"0.002035"	"0.01764"	"0.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40771"	"1739.80815"	"1739.81143"	"-1.88"	"-0.00164"	"5/96"	"5"	"96"	"155872.194580078"	"HCD"	"MS2"	"29.77119"	"12.3"	"100.000"	"99.8271"	"35522"	"35522"	"35495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"12.7"	""	"14.7"	""	"19.9"	""	"26.3"	"33.2"	""	"432"	"24"	"33.000"	"26.000"	"0.0936383497317062"	"14"	"9.9E-05"	"0.0008338"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40784"	"1739.80840"	"1739.81143"	"-1.74"	"-0.00152"	"6/96"	"6"	"96"	"213137.110839844"	"HCD"	"MS2"	"30.86459"	"15.1"	"100.000"	"99.7658"	"35469"	"35469"	"35445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"21.2"	""	"15.0"	""	"24.0"	""	"31.4"	"36.5"	""	"435"	"23"	"33.000"	"26.000"	"0.105550248785261"	"14"	"0.001596"	"0.01289"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WEYYDSVYTER"	"[R].wEYYDSVYTER.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.40930"	"1739.81133"	"1739.81143"	"-0.06"	"-0.00005"	"4/96"	"4"	"96"	"86175.0703125"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"100.1500"	"35653"	"35653"	"35633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"5.1"	""	"5.0"	""	"14.6"	""	"12.6"	"15.2"	""	"464"	"7"	"33.000"	"26.000"	"4.7806613987864"	"13"	"0.008893"	"0.1145"	"0.015"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7872"	"0.0000"	"1"	"1"	"1"	"580.64496"	"1739.92032"	"1739.92160"	"-0.73"	"-0.00043"	"11/106"	"11"	"106"	"1909367.69842529"	"HCD"	"MS2"	"8.925218"	"63.9"	"100.000"	"65.8103"	"21773"	"21773"	"21757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.4"	""	"55.8"	""	"61.8"	""	"122.7"	"0.7"	"156.1"	"118.6"	""	"1116"	"47"	"37.000"	"30.000"	"0.00117390836938969"	"25"	"0"	"0.0001752"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9184"	"0.0000"	"1"	"1"	"1"	"870.46411"	"1739.92095"	"1739.92160"	"-0.38"	"-0.00033"	"16/106"	"16"	"106"	"264477.118469238"	"HCD"	"MS2"	"0"	"26.3"	"100.000"	"65.6406"	"21671"	"21671"	"21643"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.5"	""	"19.3"	""	"27.6"	""	"54.3"	""	"64.5"	"49.1"	""	"1109"	"49"	"37.000"	"30.000"	"0.000763662650501693"	"20"	"0"	"2.439E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.46423"	"1739.92119"	"1739.92160"	"-0.24"	"-0.00021"	"12/106"	"12"	"106"	"224112.912231445"	"HCD"	"MS2"	"0"	"22.3"	"100.000"	"65.9736"	"21840"	"21840"	"21814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.8"	""	"18.5"	""	"19.3"	""	"42.7"	""	"62.8"	"39.0"	""	"1107"	"22"	"37.000"	"30.000"	"0.364852751017732"	"14"	"0.003786"	"0.04053"	"0.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.7742"	"0.0000"	"1"	"1"	"1"	"870.46436"	"1739.92143"	"1739.92160"	"-0.10"	"-0.00008"	"13/106"	"13"	"106"	"211104.737792969"	"HCD"	"MS2"	"0"	"18.9"	"100.000"	"65.6165"	"21695"	"21695"	"21664"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"15.3"	""	"19.1"	""	"38.2"	"1.1"	"50.5"	"32.6"	""	"1109"	"31"	"37.000"	"30.000"	"0.0485178503363613"	"22"	"0.0001991"	"0.003751"	"0.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"580.64551"	"1739.92197"	"1739.92160"	"0.21"	"0.00012"	"11/106"	"11"	"106"	"994520.260498047"	"HCD"	"MS2"	"17.27067"	"38.1"	"100.000"	"66.0185"	"21825"	"21825"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.7"	""	"35.1"	""	"39.1"	""	"68.6"	"1.4"	"86.1"	"79.6"	""	"1120"	"39"	"37.000"	"30.000"	"0.00653413385554139"	"24"	"0"	"0.0003026"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFTDSQLQEGK"	"[R].eFTDSQLQEGk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"P31232"	"Transgelin OS=Rattus norvegicus OX=10116 GN=Tagln PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"870.46472"	"1739.92217"	"1739.92160"	"0.33"	"0.00028"	"13/106"	"13"	"106"	"235568.618408203"	"HCD"	"MS2"	"0"	"23.1"	"100.000"	"65.9447"	"21795"	"21795"	"21769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"18.9"	""	"19.5"	""	"46.2"	""	"56.9"	"46.9"	""	"1117"	"21"	"37.000"	"30.000"	"0.476456413678823"	"16"	"0.0005161"	"0.006869"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"870.48224"	"1739.95720"	"1739.95799"	"-0.45"	"-0.00039"	"11/126"	"11"	"126"	"292926.974609375"	"HCD"	"MS2"	"25.49862"	"16.8"	"100.000"	"101.3183"	"36125"	"36125"	"36108"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"27.4"	""	"18.6"	""	"28.6"	""	"34.8"	"35.7"	""	"1085"	"19"	"37.000"	"30.000"	"0.615743367502231"	"22"	"0.0001991"	"0.004577"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7250"	"0.0000"	"1"	"1"	"1"	"870.48224"	"1739.95720"	"1739.95799"	"-0.45"	"-0.00039"	"20/126"	"20"	"126"	"861252.431152344"	"HCD"	"MS2"	"0"	"81.1"	"100.000"	"100.9077"	"35933"	"35933"	"35915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.4"	""	"110.5"	""	"98.7"	""	"131.5"	"0.4"	"159.2"	"173.5"	""	"1085"	"80"	"37.000"	"30.000"	"4.91359935987273E-07"	""	"0"	"9.237E-08"	"1.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"580.65729"	"1739.95731"	"1739.95799"	"-0.39"	"-0.00023"	"9/126"	"9"	"126"	"2731145.72717285"	"HCD"	"MS2"	"7.872365"	"73.2"	"100.000"	"101.0685"	"36025"	"36025"	"36009"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"81.2"	""	"94.9"	""	"96.7"	""	"123.4"	""	"153.7"	"146.0"	""	"1079"	"52"	"37.000"	"30.000"	"0.000340401487347064"	""	"0"	"1.937E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"580.65735"	"1739.95749"	"1739.95799"	"-0.28"	"-0.00016"	"8/126"	"8"	"126"	"379330.798583984"	"HCD"	"MS2"	"25.52041"	"15.5"	"100.000"	"101.2562"	"36074"	"36074"	"36052"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"21.6"	""	"26.4"	""	"25.6"	"1.0"	"25.5"	"27.2"	""	"1079"	"20"	"37.000"	"30.000"	"0.524797127227672"	"24"	"0.0001991"	"0.00529"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"580.65735"	"1739.95749"	"1739.95799"	"-0.28"	"-0.00016"	"13/126"	"13"	"126"	"2869006.31030273"	"HCD"	"MS2"	"6.77793"	"80.3"	"100.000"	"100.9446"	"35948"	"35948"	"35930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.4"	""	"101.7"	""	"102.6"	""	"131.5"	""	"165.1"	"177.0"	""	"1079"	"54"	"37.000"	"30.000"	"0.000240985797965444"	""	"0"	"2.208E-06"	"0.995"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESNTAGIDIFSK"	"[R].eSNTAGIDIFSk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.7753"	"0.0000"	"1"	"1"	"1"	"870.48322"	"1739.95915"	"1739.95799"	"0.67"	"0.00058"	"11/126"	"11"	"126"	"697742.076049805"	"HCD"	"MS2"	"0"	"63.0"	"100.000"	"101.0109"	"36003"	"36003"	"35988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.9"	""	"80.3"	""	"88.9"	""	"106.8"	""	"124.2"	"130.5"	""	"1068"	"89"	"37.000"	"30.000"	"6.72266169898084E-08"	""	"0"	"6.399E-08"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLRDR"	"[R].tANLGAGAAQPLRDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.66180"	"1739.97086"	"1739.97140"	"-0.31"	"-0.00018"	"9/162"	"9"	"162"	"6229179.95507813"	"HCD"	"MS2"	"20.21286"	"246.6"	"100.000"	"41.1645"	"11734"	"11734"	"11719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"410.1"	""	"382.0"	""	"373.8"	""	"363.6"	"6.0"	"384.5"	"410.5"	""	"1029"	"14"	"37.000"	"30.000"	"1.86374022685391"	"13"	"0"	"8.002E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TANLGAGAAQPLRDR"	"[R].tANLGAGAAQPLRDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"1"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"580.66187"	"1739.97104"	"1739.97140"	"-0.20"	"-0.00012"	"11/162"	"11"	"162"	"4940817.93896484"	"HCD"	"MS2"	"10.5111"	"133.5"	"100.000"	"41.0233"	"11711"	"11711"	"11698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"251.0"	""	"264.5"	""	"201.8"	""	"180.4"	"6.5"	"159.1"	"194.7"	""	"1020"	"44"	"37.000"	"30.000"	"0.00196593962409544"	"18"	"0"	"5.417E-08"	"1.326"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"870.94592"	"1740.88457"	"1740.88786"	"-1.89"	"-0.00164"	"11/96"	"11"	"96"	"229073.874694824"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"54.9876"	"17349"	"17349"	"17319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.2"	""	"22.6"	""	"28.1"	""	"17.6"	"1.6"	"32.3"	"34.9"	""	"905"	"38"	"36.000"	"29.000"	"0.00697619454959676"	"17"	"0"	"0.000189"	"0.597"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"870.94611"	"1740.88494"	"1740.88786"	"-1.68"	"-0.00146"	"9/96"	"9"	"96"	"1568594.86968994"	"HCD"	"MS2"	"0"	"120.4"	"100.000"	"54.9139"	"17352"	"17352"	"17332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"271.0"	""	"137.7"	""	"160.9"	""	"120.8"	"0.4"	"229.6"	"218.7"	""	"901"	"55"	"36.000"	"29.000"	"0.000136362449935964"	"21"	"0"	"8.545E-07"	"1.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"870.94666"	"1740.88603"	"1740.88786"	"-1.05"	"-0.00091"	"10/96"	"10"	"96"	"295507.079162598"	"HCD"	"MS2"	"0"	"27.3"	"100.000"	"54.6174"	"17232"	"17232"	"17204"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.6"	""	"30.0"	""	"37.6"	""	"29.6"	""	"52.5"	"48.9"	""	"901"	"23"	"36.000"	"29.000"	"0.208302650140367"	"14"	"0.0001686"	"0.001557"	"0.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"580.96698"	"1740.88639"	"1740.88786"	"-0.84"	"-0.00049"	"12/96"	"12"	"96"	"1796735.19824219"	"HCD"	"MS2"	"6.134065"	"69.0"	"100.000"	"54.6335"	"17238"	"17238"	"17220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"117.5"	""	"88.9"	""	"92.9"	""	"91.6"	""	"117.4"	"145.7"	""	"898"	"30"	"36.000"	"29.000"	"0.0408551059411881"	"15"	"0"	"0.0002552"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"580.96698"	"1740.88639"	"1740.88786"	"-0.84"	"-0.00049"	"13/96"	"13"	"96"	"6380642.82403564"	"HCD"	"MS2"	"10.83665"	"177.8"	"100.000"	"54.9481"	"17366"	"17366"	"17348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"329.7"	""	"201.9"	""	"245.2"	""	"203.3"	"2.0"	"352.8"	"350.3"	""	"898"	"38"	"36.000"	"29.000"	"0.00718201554847986"	"19"	"0"	"0.0001762"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"870.94690"	"1740.88652"	"1740.88786"	"-0.77"	"-0.00067"	"11/96"	"11"	"96"	"291159.437011719"	"HCD"	"MS2"	"4.874086"	"25.7"	"100.000"	"55.2335"	"17483"	"17483"	"17458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.9"	""	"39.2"	""	"39.2"	""	"21.4"	""	"47.8"	"45.7"	""	"898"	"23"	"36.000"	"29.000"	"0.205232597137079"	"16"	"0.0001991"	"0.003113"	"0.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.96710"	"1740.88675"	"1740.88786"	"-0.63"	"-0.00037"	"10/96"	"10"	"96"	"2937403.56732178"	"HCD"	"MS2"	"25.79038"	"178.4"	"100.000"	"55.2748"	"17500"	"17500"	"17474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"209.2"	""	"225.8"	""	"226.0"	""	"273.3"	""	"378.1"	"385.8"	""	"902"	"18"	"36.000"	"29.000"	"0.709866271874265"	"14"	"0.0001686"	"0.00162"	"0.405"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"580.96710"	"1740.88675"	"1740.88786"	"-0.63"	"-0.00037"	"12/96"	"12"	"96"	"5912549.47015381"	"HCD"	"MS2"	"9.710199"	"167.9"	"100.000"	"55.2725"	"17465"	"17465"	"17450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"330.7"	""	"197.9"	""	"215.0"	""	"201.1"	"3.5"	"333.2"	"308.6"	""	"902"	"36"	"36.000"	"29.000"	"0.0111218374109269"	"19"	"0"	"0.0001277"	"0.632"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.8654"	"0.0000"	"1"	"1"	"1"	"870.94720"	"1740.88713"	"1740.88786"	"-0.42"	"-0.00036"	"16/96"	"16"	"96"	"1439056.25927734"	"HCD"	"MS2"	"0"	"114.0"	"100.000"	"55.2862"	"17470"	"17470"	"17450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.1"	""	"147.9"	""	"160.8"	""	"117.9"	"2.4"	"199.5"	"202.0"	""	"917"	"52"	"36.000"	"29.000"	"0.000305730903684446"	"23"	"0"	"8.069E-06"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.96747"	"1740.88785"	"1740.88786"	"0.00"	"0.00000"	"11/96"	"11"	"96"	"1461986.04394531"	"HCD"	"MS2"	"31.16027"	"67.9"	"100.000"	"54.9831"	"17347"	"17347"	"17319"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.0"	""	"84.5"	""	"92.1"	""	"89.5"	""	"121.0"	"166.8"	""	"926"	"20"	"36.000"	"29.000"	"0.460872708233757"	"14"	"0.0001686"	"0.001591"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"580.96753"	"1740.88803"	"1740.88786"	"0.10"	"0.00006"	"10/96"	"10"	"96"	"2693465.35583496"	"HCD"	"MS2"	"12.56882"	"119.1"	"100.000"	"55.5970"	"17597"	"17597"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.5"	""	"132.6"	""	"140.3"	""	"174.8"	""	"250.8"	"255.0"	""	"916"	"35"	"36.000"	"29.000"	"0.0134544354059838"	"15"	"0"	"0.0002999"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"0.9318"	"0.0000"	"1"	"1"	"1"	"870.94781"	"1740.88835"	"1740.88786"	"0.28"	"0.00025"	"12/96"	"12"	"96"	"346718.982788086"	"HCD"	"MS2"	"0"	"29.5"	"100.000"	"55.6062"	"17601"	"17601"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.0"	""	"32.3"	""	"47.8"	""	"26.2"	""	"57.4"	"59.1"	""	"926"	"44"	"36.000"	"29.000"	"0.00199333820657662"	"18"	"0"	"0.0001001"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"580.97437"	"1740.90854"	"1740.91181"	"-1.88"	"-0.00109"	"12/110"	"12"	"110"	"690199.63671875"	"HCD"	"MS2"	"25.14696"	"22.8"	"100.000"	"70.8036"	"23765"	"23765"	"23739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.2"	""	"25.2"	""	"28.5"	""	"41.0"	""	"45.5"	"51.4"	""	"1027"	"26"	"37.000"	"30.000"	"0.124319841549903"	"19"	"0"	"0.0003536"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.3462"	"0.0000"	"1"	"1"	"1"	"580.97491"	"1740.91019"	"1740.91181"	"-0.93"	"-0.00054"	"11/110"	"11"	"110"	"1091256.99816895"	"HCD"	"MS2"	"4.61445"	"28.1"	"100.000"	"70.9899"	"23872"	"23872"	"23852"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.3"	""	"37.7"	""	"34.2"	""	"49.8"	""	"54.3"	"56.8"	""	"1038"	"26"	"37.000"	"30.000"	"0.121945943402027"	""	"0"	"0.0001385"	"0.625"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.3548"	"0.0000"	"1"	"1"	"1"	"580.97504"	"1740.91056"	"1740.91181"	"-0.72"	"-0.00042"	"9/110"	"9"	"110"	"6649666.94708252"	"HCD"	"MS2"	"48.14037"	"91.2"	"100.000"	"71.2966"	"23997"	"23997"	"23980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"125.5"	""	"115.7"	""	"114.4"	""	"146.5"	"1.4"	"177.5"	"184.6"	""	"1035"	"31"	"37.000"	"30.000"	"0.0420639792114921"	""	"0"	"5.55E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	"0.5510"	"0.0000"	"1"	"1"	"1"	"580.97510"	"1740.91074"	"1740.91181"	"-0.62"	"-0.00036"	"8/110"	"8"	"110"	"6254513.68414307"	"HCD"	"MS2"	"35.20982"	"82.7"	"100.000"	"71.1102"	"23889"	"23889"	"23870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"116.7"	""	"101.3"	""	"111.4"	""	"133.2"	"1.9"	"161.2"	"158.7"	""	"1035"	"49"	"37.000"	"30.000"	"0.000627928730115626"	""	"0"	"2.468E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"FLEEHPGGEEVLR"	"[K].fLEEHPGGEEVLR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"P00173"	"Cytochrome b5 OS=Rattus norvegicus OX=10116 GN=Cyb5a PE=1 SV=2"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"2"	"580.97540"	"1740.91166"	"1740.91181"	"-0.09"	"-0.00005"	"7/110"	"7"	"110"	"1047292.01037598"	"HCD"	"MS2"	"20.88204"	"38.0"	"100.000"	"70.9741"	"23834"	"23834"	"23810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"54.5"	""	"50.3"	"1.7"	"63.4"	""	"71.5"	"71.8"	""	"1030"	"6"	"37.000"	"30.000"	"14.1191069854286"	"14"	"0.00192"	"0.01585"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDSQPWVLPVVR"	"[R].tDDSQPWVLPVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"0.2174"	"0.0000"	"1"	"1"	"1"	"580.98718"	"1740.94699"	"1740.94820"	"-0.69"	"-0.00040"	"10/118"	"10"	"118"	"1147478.39190674"	"HCD"	"MS2"	"24.66692"	"13.7"	"100.000"	"110.6744"	"39794"	"39794"	"39772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"19.2"	""	"21.8"	""	"15.4"	""	"27.1"	"27.2"	""	"1055"	"23"	"37.000"	"30.000"	"0.293239495710138"	""	"0.0001686"	"0.001304"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDSQPWVLPVVR"	"[R].tDDSQPWVLPVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"870.97748"	"1740.94768"	"1740.94820"	"-0.30"	"-0.00026"	"9/118"	"9"	"118"	"483145.474975586"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"110.6308"	"39776"	"39776"	"39756"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.6"	""	"23.8"	""	"26.5"	""	"30.9"	"0.6"	"35.5"	"45.0"	""	"1040"	"58"	"37.000"	"30.000"	"8.79029284454497E-05"	"22"	"0"	"8.018E-07"	"1.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDSQPWVLPVVR"	"[R].tDDSQPWVLPVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"2"	"2"	"0.9123"	"0.0000"	"1"	"1"	"1"	"870.97766"	"1740.94805"	"1740.94820"	"-0.09"	"-0.00008"	"9/118"	"9"	"118"	"493470.354980469"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"110.4986"	"39709"	"39709"	"39687"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.5"	""	"37.9"	""	"27.2"	""	"31.5"	"1.0"	"35.3"	"46.3"	""	"1041"	"57"	"37.000"	"30.000"	"0.000109501667789845"	"21"	"0"	"1.658E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TDDSQPWVLPVVR"	"[R].tDDSQPWVLPVVR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"P13221"	"Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"580.98767"	"1740.94846"	"1740.94820"	"0.15"	"0.00009"	"11/118"	"11"	"118"	"1115333.58898926"	"HCD"	"MS2"	"18.777"	"12.9"	"100.000"	"110.5701"	"39738"	"39738"	"39719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"17.0"	""	"17.2"	""	"18.9"	""	"23.7"	"27.9"	""	"1052"	"15"	"37.000"	"30.000"	"1.77005085491508"	"18"	"0.002673"	"0.02811"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNMDVSLHLPSR"	"[K].dLNmDVSLHLPSR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.30823"	"1741.91013"	"1741.91044"	"-0.18"	"-0.00010"	"11/138"	"11"	"138"	"1493844.38012695"	"HCD"	"MS2"	"8.154701"	"18.5"	"100.000"	"80.0115"	"27499"	"27499"	"27478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"13.4"	""	"18.0"	""	"60.0"	""	"35.7"	"33.8"	""	"974"	"45"	"36.000"	"29.000"	"0.0014405520712106"	"15"	"0"	"9.475E-07"	"1.07"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNMDVSLHLPSR"	"[K].dLNmDVSLHLPSR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"581.30823"	"1741.91013"	"1741.91044"	"-0.18"	"-0.00010"	"16/138"	"16"	"138"	"1841951.2376709"	"HCD"	"MS2"	"3.735265"	"21.8"	"100.000"	"80.4511"	"27704"	"27704"	"27684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"8.7"	""	"19.7"	""	"69.1"	""	"41.7"	"49.3"	""	"974"	"52"	"36.000"	"29.000"	"0.000323988027070248"	"22"	"0"	"4.176E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNMDVSLHLPSR"	"[K].dLNmDVSLHLPSR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"581.30823"	"1741.91013"	"1741.91044"	"-0.18"	"-0.00010"	"17/138"	"17"	"138"	"1914444.14709473"	"HCD"	"MS2"	"9.675327"	"22.2"	"100.000"	"80.1308"	"27575"	"27575"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"27.2"	""	"21.3"	""	"60.7"	""	"44.0"	"39.2"	""	"974"	"40"	"36.000"	"29.000"	"0.0051585656416134"	"20"	"0"	"3.266E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLNMDVSLHLPSR"	"[K].dLNmDVSLHLPSR.[S]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"581.30841"	"1741.91068"	"1741.91044"	"0.14"	"0.00008"	"14/138"	"14"	"138"	"1977596.34899902"	"HCD"	"MS2"	"3.108299"	"22.0"	"100.000"	"80.3197"	"27624"	"27624"	"27605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"16.0"	""	"15.1"	""	"71.2"	""	"46.2"	"42.0"	""	"970"	"47"	"36.000"	"29.000"	"0.000864453702212322"	"22"	"0"	"3.023E-07"	"1.172"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.31915"	"1741.94291"	"1741.94345"	"-0.31"	"-0.00018"	"15/144"	"15"	"144"	"1899148.25793457"	"HCD"	"MS2"	"13.57637"	"26.8"	"100.000"	"86.7831"	"30262"	"30262"	"30248"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"31.5"	""	"39.4"	""	"44.0"	""	"49.0"	"55.1"	""	"1007"	"39"	"37.000"	"30.000"	"0.00566238604392347"	"15"	"0"	"1.689E-07"	"1.224"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"871.47528"	"1741.94328"	"1741.94345"	"-0.09"	"-0.00008"	"12/144"	"12"	"144"	"391218.555969238"	"HCD"	"MS2"	"0"	"15.9"	"100.000"	"87.0122"	"30319"	"30319"	"30302"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"17.9"	""	"25.7"	""	"22.6"	""	"28.7"	"29.0"	""	"1000"	"25"	"36.000"	"30.000"	"0.143208898495329"	"16"	"0"	"8.908E-06"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"871.47571"	"1741.94414"	"1741.94345"	"0.40"	"0.00035"	"6/144"	"6"	"144"	"76578.9661254883"	"HCD"	"MS2"	"13.70945"	"4.4"	"100.000"	"87.2537"	"30451"	"30451"	"30429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.3"	""	"6.1"	""	"4.2"	""	"7.8"	""	"10.0"	"10.1"	""	"1003"	"7"	"37.000"	"30.000"	"10.971624544107"	"15"	"0.001488"	"0.01259"	"0.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"2"	"2"	"0.9032"	"0.0000"	"1"	"1"	"1"	"871.47583"	"1741.94438"	"1741.94345"	"0.54"	"0.00047"	"15/144"	"15"	"144"	"466427.33001709"	"HCD"	"MS2"	"0"	"18.3"	"100.000"	"86.9584"	"30332"	"30332"	"30315"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.1"	""	"25.6"	""	"27.9"	""	"24.6"	""	"35.3"	"33.7"	""	"1004"	"93"	"37.000"	"30.000"	"2.41381352921763E-08"	"28"	"0"	"6.079E-09"	"1.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.31982"	"1741.94492"	"1741.94345"	"0.84"	"0.00049"	"16/144"	"16"	"144"	"1704617.81768799"	"HCD"	"MS2"	"15.37894"	"27.2"	"100.000"	"86.8043"	"30236"	"30236"	"30222"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"25.0"	""	"37.1"	""	"47.8"	"1.5"	"55.0"	"51.9"	""	"1007"	"41"	"37.000"	"30.000"	"0.00402716547396039"	"15"	"0"	"8.798E-07"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"871.47662"	"1741.94597"	"1741.94345"	"1.45"	"0.00126"	"10/144"	"10"	"144"	"190462.03918457"	"HCD"	"MS2"	"17.6802"	"9.0"	"100.000"	"86.7281"	"30206"	"30206"	"30184"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"13.2"	""	"13.0"	""	"12.2"	""	"18.5"	"15.5"	""	"1021"	"37"	"37.000"	"30.000"	"0.00946227893753262"	"18"	"0"	"2.748E-05"	"0.769"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLPAATAPAGPASFAR"	"[R].dLPAATAPAGPASFAR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"P85971"	"6-phosphogluconolactonase OS=Rattus norvegicus OX=10116 GN=Pgls PE=1 SV=1"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"871.47797"	"1741.94866"	"1741.94345"	"2.99"	"0.00260"	"6/144"	"6"	"144"	"151389.58972168"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"86.6467"	"30207"	"30207"	"30190"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"7.7"	""	"9.4"	""	"12.7"	""	"19.4"	"17.4"	""	"996"	"35"	"36.000"	"29.000"	"0.015496347358788"	"18"	"9.9E-05"	"0.0008385"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPAYSQDTFK"	"[K].dIPAYSQDTFk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"581.65009"	"1742.93570"	"1742.93652"	"-0.47"	"-0.00027"	"10/104"	"10"	"104"	"655073.375915527"	"HCD"	"MS2"	"9.88902"	"19.5"	"100.000"	"90.8425"	"31897"	"31897"	"31874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.1"	""	"19.1"	""	"23.5"	""	"38.7"	""	"38.6"	"38.4"	""	"1007"	"9"	"37.000"	"30.000"	"6.68343109466923"	"13"	"0.0001991"	"0.005349"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPAYSQDTFK"	"[K].dIPAYSQDTFk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"871.97168"	"1742.93608"	"1742.93652"	"-0.25"	"-0.00022"	"5/104"	"5"	"104"	"83095.8459472656"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"90.8079"	"31883"	"31883"	"31858"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"4.8"	""	"7.5"	""	"9.1"	""	"12.9"	"13.4"	""	"1000"	"6"	"36.000"	"30.000"	"12.3301966861717"	"14"	"0.009411"	"0.1241"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"NNIPYFETSAK"	"[K].nNIPYFETSAk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K11(TMT6plex)"	"1"	"1"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"P09527"	"Ras-related protein Rab-7a OS=Rattus norvegicus OX=10116 GN=Rab7a PE=1 SV=2"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"6"	"871.97217"	"1742.93706"	"1742.93652"	"0.31"	"0.00027"	"3/104"	"3"	"104"	"49729.0327148438"	"HCD"	"MS2"	"0"	"3.8"	"100.000"	"97.3334"	"34485"	"34485"	"34462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.7"	""	"4.8"	""	"4.5"	""	"6.2"	""	"7.1"	"9.5"	""	"1011"	"11"	"37.000"	"30.000"	"3.80821237467394"	"23"	"0.005392"	"0.06853"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIPAYSQDTFK"	"[K].dIPAYSQDTFk.[V]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"P07153"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"581.65125"	"1742.93918"	"1742.93652"	"1.53"	"0.00089"	"11/104"	"11"	"104"	"630777.887939453"	"HCD"	"MS2"	"22.80022"	"18.3"	"100.000"	"90.9290"	"31894"	"31894"	"31869"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"23.0"	""	"15.4"	""	"34.2"	""	"40.6"	"37.3"	""	"995"	"21"	"36.000"	"29.000"	"0.373932389774058"	"16"	"9.9E-05"	"0.0008054"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"581.65375"	"1742.94669"	"1742.94859"	"-1.09"	"-0.00063"	"15/128"	"15"	"128"	"3207563.33764648"	"HCD"	"MS2"	"7.943501"	"32.5"	"100.000"	"101.9155"	"36341"	"36341"	"36324"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.5"	""	"39.4"	""	"42.7"	""	"52.2"	""	"64.0"	"54.1"	""	"1015"	"54"	"37.000"	"30.000"	"0.000191617886894649"	"19"	"0"	"5.411E-07"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"581.65375"	"1742.94669"	"1742.94859"	"-1.09"	"-0.00063"	"15/128"	"15"	"128"	"3207563.33764648"	"HCD"	"MS2"	"7.943501"	"32.5"	"100.000"	"101.9155"	"36341"	"36341"	"36324"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.5"	""	"39.4"	""	"42.7"	""	"52.2"	""	"64.0"	"54.1"	""	"1015"	"54"	"37.000"	"30.000"	"0.000191617886894649"	"19"	"0"	"5.411E-07"	"1.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"581.65393"	"1742.94724"	"1742.94859"	"-0.78"	"-0.00045"	"17/128"	"17"	"128"	"2560288.0368042"	"HCD"	"MS2"	"12.39874"	"28.7"	"100.000"	"102.1141"	"36446"	"36446"	"36430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"36.2"	""	"43.7"	""	"49.3"	"0.6"	"50.4"	"49.0"	""	"995"	"62"	"36.000"	"29.000"	"2.91603736845729E-05"	"20"	"0"	"3.51E-07"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"2"	"581.65393"	"1742.94724"	"1742.94859"	"-0.78"	"-0.00045"	"17/128"	"17"	"128"	"2560288.0368042"	"HCD"	"MS2"	"12.39874"	"28.7"	"100.000"	"102.1141"	"36446"	"36446"	"36430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	""	"36.2"	""	"43.7"	""	"49.3"	"0.6"	"50.4"	"49.0"	""	"995"	"62"	"36.000"	"29.000"	"2.91603736845729E-05"	"20"	"0"	"3.51E-07"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97748"	"1742.94768"	"1742.94859"	"-0.52"	"-0.00046"	"11/128"	"11"	"128"	"519886.405090332"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"102.0195"	"36408"	"36408"	"36382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"36.5"	""	"37.2"	""	"38.6"	""	"46.5"	"47.0"	""	"1008"	"63"	"37.000"	"30.000"	"2.69420437136074E-05"	"23"	"0"	"1.24E-06"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97748"	"1742.94768"	"1742.94859"	"-0.52"	"-0.00046"	"11/128"	"11"	"128"	"519886.405090332"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"102.0195"	"36408"	"36408"	"36382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.6"	""	"36.5"	""	"37.2"	""	"38.6"	""	"46.5"	"47.0"	""	"1008"	"63"	"37.000"	"30.000"	"2.69420437136074E-05"	"23"	"0"	"1.24E-06"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97754"	"1742.94780"	"1742.94859"	"-0.45"	"-0.00040"	"5/128"	"5"	"128"	"128314.870483398"	"HCD"	"MS2"	"11.56"	"7.6"	"100.000"	"102.7216"	"36689"	"36689"	"36671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"11.4"	""	"7.6"	""	"13.4"	""	"11.8"	"15.7"	""	"1008"	"20"	"37.000"	"30.000"	"0.505161839991262"	"26"	"0.0005161"	"0.006962"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97754"	"1742.94780"	"1742.94859"	"-0.45"	"-0.00040"	"5/128"	"5"	"128"	"128314.870483398"	"HCD"	"MS2"	"11.56"	"7.6"	"100.000"	"102.7216"	"36689"	"36689"	"36671"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"11.4"	""	"7.6"	""	"13.4"	""	"11.8"	"15.7"	""	"1008"	"20"	"37.000"	"30.000"	"0.505161839991262"	"26"	"0.0005161"	"0.006962"	"0.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97784"	"1742.94841"	"1742.94859"	"-0.10"	"-0.00009"	"12/128"	"12"	"128"	"3565540.84552002"	"HCD"	"MS2"	"0"	"150.5"	"100.000"	"102.3267"	"36532"	"36532"	"36516"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.2"	""	"184.7"	""	"213.4"	""	"225.5"	"1.7"	"260.6"	"272.7"	""	"989"	"81"	"36.000"	"29.000"	"4.39709952780754E-07"	"27"	"0"	"3.459E-10"	"1.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97784"	"1742.94841"	"1742.94859"	"-0.10"	"-0.00009"	"12/128"	"12"	"128"	"3565540.84552002"	"HCD"	"MS2"	"0"	"150.5"	"100.000"	"102.3267"	"36532"	"36532"	"36516"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"265.2"	""	"184.7"	""	"213.4"	""	"225.5"	"1.7"	"260.6"	"272.7"	""	"989"	"81"	"36.000"	"29.000"	"4.39709952780754E-07"	"27"	"0"	"3.459E-10"	"1.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97827"	"1742.94927"	"1742.94859"	"0.39"	"0.00034"	"11/128"	"11"	"128"	"648657.231323242"	"HCD"	"MS2"	"22.93999"	"36.0"	"100.000"	"101.8164"	"36301"	"36301"	"36278"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.8"	""	"44.2"	""	"50.6"	""	"58.9"	""	"63.4"	"60.2"	""	"986"	"43"	"36.000"	"29.000"	"0.00225863950150265"	"17"	"0"	"2.471E-06"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97827"	"1742.94927"	"1742.94859"	"0.39"	"0.00034"	"11/128"	"11"	"128"	"648657.231323242"	"HCD"	"MS2"	"22.93999"	"36.0"	"100.000"	"101.8164"	"36301"	"36301"	"36278"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.8"	""	"44.2"	""	"50.6"	""	"58.9"	""	"63.4"	"60.2"	""	"986"	"43"	"36.000"	"29.000"	"0.00225863950150265"	"17"	"0"	"2.471E-06"	"0.984"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97827"	"1742.94927"	"1742.94859"	"0.39"	"0.00034"	"12/128"	"12"	"128"	"4668381.87176514"	"HCD"	"MS2"	"0"	"182.5"	"100.000"	"102.0956"	"36415"	"36415"	"36401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.7"	""	"209.4"	""	"271.9"	""	"282.4"	"0.7"	"329.9"	"308.3"	""	"986"	"77"	"36.000"	"29.000"	"9.70167940825475E-07"	"27"	"0"	"5.078E-10"	"1.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97827"	"1742.94927"	"1742.94859"	"0.39"	"0.00034"	"12/128"	"12"	"128"	"4668381.87176514"	"HCD"	"MS2"	"0"	"182.5"	"100.000"	"102.0956"	"36415"	"36415"	"36401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"323.7"	""	"209.4"	""	"271.9"	""	"282.4"	"0.7"	"329.9"	"308.3"	""	"986"	"77"	"36.000"	"29.000"	"9.70167940825475E-07"	"27"	"0"	"5.078E-10"	"1.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDIPLNLSR"	"[R].gVVDSEDIPLNLSR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"Q5XHZ0"	"Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus OX=10116 GN=Trap1 PE=1 SV=1"	"0"	"2"	"2"	"0.0000"	"0.0000"	"1"	"1"	"1"	"871.97833"	"1742.94939"	"1742.94859"	"0.46"	"0.00040"	"18/128"	"18"	"128"	"466169.641967773"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"102.3564"	"36519"	"36519"	"36512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"26.8"	""	"31.2"	""	"35.4"	"1.4"	"40.7"	"35.8"	""	"999"	"49"	"36.000"	"29.000"	"0.000630282853528039"	"26"	"0"	"3.097E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVDSEDLPLNISR"	"[R].gVVDSEDLPLNISR.[E]"	"N-Term(TMT6plex)"	"2"	"2"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4;Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P34058; P82995"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4; Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"2"	"2"	"871.97833"	"1742.94939"	"1742.94859"	"0.46"	"0.00040"	"18/128"	"18"	"128"	"466169.641967773"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"102.3564"	"36519"	"36519"	"36512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"26.8"	""	"31.2"	""	"35.4"	"1.4"	"40.7"	"35.8"	""	"999"	"49"	"36.000"	"29.000"	"0.000630282853528039"	"26"	"0"	"3.097E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLmER.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"582.28967"	"1744.85447"	"1744.85259"	"1.08"	"0.00063"	"13/100"	"13"	"100"	"838481.340515137"	"HCD"	"MS2"	"19.16006"	"20.3"	"100.000"	"74.4717"	"25253"	"25253"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.1"	""	"25.9"	""	"34.8"	""	"39.4"	""	"35.6"	"32.3"	""	"681"	"30"	"35.000"	"28.000"	"0.0344442804175496"	"20"	"0"	"4.777E-05"	"0.72"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLmER.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"582.28979"	"1744.85483"	"1744.85259"	"1.29"	"0.00075"	"14/100"	"14"	"100"	"604729.970153809"	"HCD"	"MS2"	"3.374731"	"17.3"	"100.000"	"74.8831"	"25450"	"25450"	"25430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.5"	""	"19.1"	""	"24.9"	""	"27.0"	""	"33.0"	"36.3"	""	"681"	"40"	"35.000"	"28.000"	"0.00304170517211187"	"19"	"0"	"1.197E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLmER.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"582.29022"	"1744.85611"	"1744.85259"	"2.02"	"0.00118"	"13/100"	"13"	"100"	"391544.475524902"	"HCD"	"MS2"	"9.392352"	"14.7"	"100.000"	"74.7991"	"25385"	"25385"	"25361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"15.8"	""	"16.0"	""	"28.1"	"1.6"	"27.1"	"32.4"	""	"690"	"28"	"35.000"	"28.000"	"0.0503290919794995"	"21"	"0.0001991"	"0.002235"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGIVEDWDLMER"	"[R].hGIVEDWDLmER.[F]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"582.29034"	"1744.85648"	"1744.85259"	"2.23"	"0.00130"	"14/100"	"14"	"100"	"786520.802429199"	"HCD"	"MS2"	"26.60038"	"20.2"	"100.000"	"74.5857"	"25330"	"25330"	"25303"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.2"	""	"26.1"	""	"20.0"	""	"42.2"	""	"35.5"	"38.5"	""	"694"	"32"	"35.000"	"28.000"	"0.0210537506367211"	"15"	"0"	"8.12E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSLQEGDQLLSAR"	"[K].sLSLQEGDQLLSAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"582.65753"	"1745.95804"	"1745.95949"	"-0.83"	"-0.00048"	"16/144"	"16"	"144"	"919653.118530273"	"HCD"	"MS2"	"54.14133"	"25.7"	"100.000"	"102.6638"	"36666"	"36666"	"36652"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.7"	""	"31.8"	""	"34.9"	""	"44.9"	""	"49.9"	"50.0"	""	"1194"	"40"	"37.000"	"30.000"	"0.00544470471095478"	""	"0"	"9.373E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLSLQEGDQLLSAR"	"[K].sLSLQEGDQLLSAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.6970"	"0.0000"	"1"	"1"	"1"	"582.65759"	"1745.95823"	"1745.95949"	"-0.73"	"-0.00042"	"15/144"	"15"	"144"	"1691828.75042725"	"HCD"	"MS2"	"55.19322"	"49.7"	"100.000"	"102.3980"	"36536"	"36536"	"36517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.6"	""	"61.0"	""	"65.0"	""	"76.2"	""	"111.9"	"107.7"	""	"1195"	"33"	"37.000"	"30.000"	"0.0306434676934841"	"25"	"0"	"5.675E-06"	"0.91"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MINLSVPDTIDER"	"[K].mINLSVPDTIDER.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.45813"	"1747.90898"	"1747.90977"	"-0.45"	"-0.00039"	"7/130"	"7"	"130"	"103814.589355469"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"101.0231"	"35980"	"35980"	"35960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"6.9"	""	"9.7"	""	"5.6"	""	"11.3"	"13.0"	""	"1006"	"28"	"37.000"	"30.000"	"0.0800880989706738"	"14"	"0.002559"	"0.02592"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DYDPMHGDVIK"	"[R].dYDPMHGDVIk.[H]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.30804"	"1747.90958"	"1747.90893"	"0.37"	"0.00022"	"11/94"	"11"	"94"	"707646.281738281"	"HCD"	"MS2"	"17.15644"	"36.4"	"100.000"	"72.8250"	"24613"	"24613"	"24584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.0"	""	"46.4"	""	"47.4"	""	"62.6"	"2.1"	"74.3"	"67.4"	""	"1011"	"6"	"37.000"	"30.000"	"11.5803359847411"	"13"	"0.0001991"	"0.003012"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MINLSVPDTIDER"	"[K].mINLSVPDTIDER.[A]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"Q63598"	"Plastin-3 OS=Rattus norvegicus OX=10116 GN=Pls3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.45923"	"1747.91118"	"1747.90977"	"0.81"	"0.00071"	"10/130"	"10"	"130"	"104258.914428711"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"101.1771"	"36069"	"36069"	"36047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"4.2"	""	"8.0"	""	"6.0"	""	"12.3"	"10.1"	""	"1001"	"18"	"36.000"	"30.000"	"0.77876079861834"	"14"	"0.006267"	"0.07655"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISTNYYASQK"	"[K].dISTNYYASQk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"874.46552"	"1747.92375"	"1747.92669"	"-1.68"	"-0.00147"	"9/108"	"9"	"108"	"101190.579528809"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"64.5031"	"21241"	"21241"	"21211"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.8"	""	"10.8"	""	"10.6"	""	"17.1"	""	"17.2"	"15.0"	""	"1024"	"25"	"37.000"	"30.000"	"0.161908616200621"	"19"	"0.001718"	"0.01503"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DISTNYYASQK"	"[K].dISTNYYASQk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"874.46863"	"1747.92998"	"1747.92669"	"1.88"	"0.00165"	"7/108"	"7"	"108"	"122271.922851563"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"64.5204"	"21214"	"21214"	"21192"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"9.3"	""	"12.5"	""	"17.6"	""	"20.5"	"22.1"	""	"1064"	"26"	"37.000"	"30.000"	"0.12471297297502"	"16"	"0.001615"	"0.01382"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFLEKEELPR"	"[R].eFLEkEELPR.[A]"	"N-Term(TMT6plex); K5(TMT6plex)"	"1"	"1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"Q99N27"	"Sorting nexin-1 OS=Rattus norvegicus OX=10116 GN=Snx1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.33826"	"1748.00022"	"1747.99946"	"0.44"	"0.00025"	"4/94"	"4"	"94"	"786856.434204102"	"HCD"	"MS2"	"11.72861"	"44.9"	"100.000"	"80.5038"	"27726"	"27726"	"27700"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.9"	""	"58.5"	""	"71.1"	""	"73.3"	"0.8"	"62.1"	"70.0"	""	"1019"	"3"	"37.000"	"30.000"	"25.06941434297"	"13"	"0.002588"	"0.02663"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9412"	"0.0000"	"1"	"1"	"1"	"874.93591"	"1748.86455"	"1748.86526"	"-0.41"	"-0.00035"	"9/132"	"9"	"132"	"167073.416748047"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"82.4578"	"28516"	"28516"	"28490"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"14.5"	""	"11.2"	""	"21.7"	"2.1"	"22.7"	"23.6"	""	"784"	"17"	"35.000"	"28.000"	"0.733307399023393"	"15"	"0.002588"	"0.02675"	"0.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.62640"	"1748.86466"	"1748.86526"	"-0.34"	"-0.00020"	"12/132"	"12"	"132"	"984571.600585938"	"HCD"	"MS2"	"37.95719"	"20.0"	"100.000"	"82.5693"	"28561"	"28561"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.1"	""	"22.9"	""	"25.4"	""	"37.9"	"0.9"	"41.1"	"36.5"	""	"783"	"31"	"35.000"	"28.000"	"0.0330926667880253"	"14"	"0"	"0.0002142"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"874.93622"	"1748.86516"	"1748.86526"	"-0.06"	"-0.00005"	"9/132"	"9"	"132"	"436760.758911133"	"HCD"	"MS2"	"32.73877"	"25.4"	"100.000"	"82.7511"	"28606"	"28606"	"28586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"24.1"	""	"33.3"	""	"37.5"	""	"55.2"	"63.0"	""	"790"	"23"	"35.000"	"28.000"	"0.208735874451196"	"15"	"0.0001991"	"0.00441"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"874.93646"	"1748.86565"	"1748.86526"	"0.22"	"0.00019"	"15/132"	"15"	"132"	"383080.846374512"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"82.7508"	"28634"	"28634"	"28614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.8"	""	"23.1"	""	"30.0"	""	"44.7"	""	"54.0"	"43.2"	""	"781"	"37"	"35.000"	"28.000"	"0.00710593185287199"	"15"	"0"	"0.0001941"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"583.62701"	"1748.86649"	"1748.86526"	"0.70"	"0.00041"	"13/132"	"13"	"132"	"685620.72064209"	"HCD"	"MS2"	"40.8388"	"18.8"	"100.000"	"82.4564"	"28487"	"28487"	"28463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"20.5"	""	"22.8"	""	"38.5"	""	"37.4"	"32.3"	""	"782"	"30"	"35.000"	"28.000"	"0.0418000457776059"	"15"	"9.9E-05"	"0.000404"	"0.529"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"583.62799"	"1748.86942"	"1748.86526"	"2.38"	"0.00139"	"14/132"	"14"	"132"	"845009.375427246"	"HCD"	"MS2"	"14.26239"	"16.7"	"100.000"	"82.7532"	"28607"	"28607"	"28586"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"21.8"	""	"21.3"	""	"21.1"	""	"31.4"	"35.8"	""	"804"	"35"	"36.000"	"29.000"	"0.0115139954390245"	"20"	"0"	"0.0001088"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDFTNENPLETR"	"[R].sPDFTNENPLETR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"P06685"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"583.62860"	"1748.87125"	"1748.86526"	"3.43"	"0.00200"	"13/132"	"13"	"132"	"661503.489990234"	"HCD"	"MS2"	"18.40335"	"15.4"	"100.000"	"82.8993"	"28694"	"28694"	"28675"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"17.8"	""	"22.3"	""	"20.7"	""	"29.2"	"31.5"	""	"826"	"28"	"36.000"	"29.000"	"0.0594223812819664"	"16"	"0"	"0.000303"	"0.555"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QADYVPSDQDLLR"	"[K].qADYVPSDQDLLR.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"P63095"	"Guanine nucleotide-binding protein G(s) subunit alpha isoforms short OS=Rattus norvegicus OX=10116 GN=Gnas PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"874.95227"	"1748.89726"	"1748.90164"	"-2.50"	"-0.00219"	"6/134"	"6"	"134"	"68759.6728515625"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"87.4450"	"30529"	"30529"	"30498"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.4"	""	"3.1"	""	"5.3"	""	"2.2"	""	"9.1"	"5.6"	""	"975"	"11"	"36.000"	"29.000"	"3.46716587905998"	"15"	"0.002588"	"0.02622"	"0.154"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHQYQFLEDAVR"	"[K].dHQYQFLEDAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.96350"	"1749.87595"	"1749.87576"	"0.11"	"0.00006"	"11/122"	"11"	"122"	"292491.390563965"	"HCD"	"MS2"	"62.55523"	"11.2"	"100.000"	"78.3929"	"26867"	"26867"	"26839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"14.6"	""	"15.7"	""	"19.5"	""	"23.7"	"19.8"	""	"831"	"22"	"36.000"	"29.000"	"0.250363508013896"	"14"	"9.9E-05"	"0.0004795"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DHQYQFLEDAVR"	"[K].dHQYQFLEDAVR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.96368"	"1749.87650"	"1749.87576"	"0.42"	"0.00025"	"10/122"	"10"	"122"	"396156.241943359"	"HCD"	"MS2"	"14.62541"	"10.9"	"100.000"	"78.3700"	"26831"	"26831"	"26806"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"16.6"	""	"12.5"	""	"18.3"	""	"19.3"	"23.0"	""	"832"	"27"	"36.000"	"29.000"	"0.0805551537001788"	"14"	"9.9E-05"	"0.000507"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYFEYIEENK"	"[R].gYFEYIEENk.[Y]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"Q6IMY8"	"Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.97467"	"1749.90946"	"1749.90997"	"-0.29"	"-0.00017"	"10/82"	"10"	"82"	"386578.791931152"	"HCD"	"MS2"	"15.89164"	"14.1"	"100.000"	"107.0952"	"38410"	"38410"	"38392"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"11.5"	""	"15.2"	""	"28.5"	""	"33.1"	"25.6"	""	"1080"	"21"	"37.000"	"30.000"	"0.460674061569498"	"14"	"0.002628"	"0.02736"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"875.48395"	"1749.96062"	"1749.96347"	"-1.63"	"-0.00142"	"7/122"	"7"	"122"	"148453.122070313"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"81.5833"	"28136"	"28136"	"28120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.2"	""	"14.1"	""	"14.2"	""	"16.9"	""	"30.8"	"16.7"	""	"1152"	"18"	"37.000"	"30.000"	"0.846101535922867"	"17"	"0.002559"	"0.0255"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"583.99219"	"1749.96201"	"1749.96347"	"-0.83"	"-0.00049"	"13/122"	"13"	"122"	"681601.898071289"	"HCD"	"MS2"	"14.38553"	"24.8"	"100.000"	"81.6133"	"28148"	"28148"	"28128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.8"	""	"28.7"	""	"30.9"	""	"42.0"	""	"47.2"	"43.9"	""	"1138"	"47"	"37.000"	"30.000"	"0.00111715199751971"	"27"	"0"	"7.417E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"583.99255"	"1749.96311"	"1749.96347"	"-0.20"	"-0.00012"	"12/122"	"12"	"122"	"723802.00592041"	"HCD"	"MS2"	"11.30457"	"22.1"	"100.000"	"82.3143"	"28461"	"28461"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"22.8"	""	"27.8"	""	"40.0"	""	"41.9"	"44.1"	""	"1128"	"55"	"37.000"	"30.000"	"0.000186328421144763"	"27"	"0"	"5.072E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"583.99261"	"1749.96329"	"1749.96347"	"-0.10"	"-0.00006"	"13/122"	"13"	"122"	"719481.82611084"	"HCD"	"MS2"	"13.75733"	"25.1"	"100.000"	"82.2522"	"28408"	"28408"	"28384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.9"	""	"28.6"	""	"37.7"	""	"42.7"	""	"45.7"	"44.6"	""	"1126"	"52"	"37.000"	"30.000"	"0.000351162712376602"	"28"	"0"	"2.485E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.4231"	"0.0000"	"1"	"1"	"1"	"875.48529"	"1749.96330"	"1749.96347"	"-0.09"	"-0.00008"	"7/122"	"7"	"122"	"220575.246643066"	"HCD"	"MS2"	"9.696511"	"18.0"	"100.000"	"82.2545"	"28409"	"28409"	"28384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"20.6"	""	"22.3"	""	"28.5"	""	"36.9"	"37.9"	""	"1126"	"26"	"37.000"	"30.000"	"0.130469318793225"	"29"	"0.0001991"	"0.002183"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7553"	"0.0000"	"1"	"1"	"1"	"875.48541"	"1749.96355"	"1749.96347"	"0.05"	"0.00004"	"22/122"	"22"	"122"	"996248.663879395"	"HCD"	"MS2"	"0"	"76.1"	"100.000"	"81.9682"	"28320"	"28320"	"28307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"156.5"	""	"82.8"	""	"97.8"	""	"119.0"	"0.8"	"129.6"	"133.4"	""	"1126"	"94"	"37.000"	"30.000"	"2.23104533285812E-08"	""	"0"	"1.61E-08"	"1.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8226"	"0.0000"	"1"	"1"	"1"	"583.99274"	"1749.96366"	"1749.96347"	"0.11"	"0.00006"	"9/122"	"9"	"122"	"852782.175354004"	"HCD"	"MS2"	"21.63025"	"27.5"	"100.000"	"81.6913"	"28208"	"28208"	"28184"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.8"	""	"28.7"	""	"35.1"	""	"53.2"	""	"48.8"	"49.5"	""	"1126"	"62"	"37.000"	"30.000"	"3.47943233277928E-05"	"27"	"0"	"6.673E-07"	"1.101"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.7937"	"0.0000"	"1"	"1"	"1"	"583.99274"	"1749.96366"	"1749.96347"	"0.11"	"0.00006"	"15/122"	"15"	"122"	"3743551.95739746"	"HCD"	"MS2"	"3.640156"	"87.7"	"100.000"	"81.9638"	"28319"	"28319"	"28307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"183.2"	""	"79.7"	""	"107.8"	""	"138.9"	"1.4"	"164.0"	"155.2"	""	"1126"	"63"	"37.000"	"30.000"	"2.5674878368058E-05"	"30"	"0"	"7.262E-07"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"583.99286"	"1749.96402"	"1749.96347"	"0.32"	"0.00019"	"9/122"	"9"	"122"	"3615330.53955078"	"HCD"	"MS2"	"4.770813"	"80.6"	"100.000"	"81.8972"	"28264"	"28264"	"28247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"155.4"	""	"79.6"	""	"101.7"	""	"140.7"	""	"152.9"	"137.3"	""	"1131"	"64"	"37.000"	"30.000"	"2.06743854657222E-05"	"28"	"0"	"4.766E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.7556"	"0.0000"	"1"	"1"	"1"	"875.48596"	"1749.96465"	"1749.96347"	"0.68"	"0.00059"	"11/122"	"11"	"122"	"947276.751464844"	"HCD"	"MS2"	"0"	"75.7"	"100.000"	"81.9039"	"28266"	"28266"	"28247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"152.8"	""	"81.4"	""	"85.7"	""	"114.7"	""	"144.2"	"138.4"	""	"1138"	"90"	"37.000"	"30.000"	"5.84941273633965E-08"	""	"0"	"1.553E-09"	"1.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELISNSSDALDK"	"[R].eLISNSSDALDk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"2"	"2"	"0.6610"	"0.0000"	"1"	"1"	"1"	"875.48608"	"1749.96489"	"1749.96347"	"0.81"	"0.00071"	"9/122"	"9"	"122"	"223512.314025879"	"HCD"	"MS2"	"11.0407"	"18.1"	"100.000"	"81.6936"	"28209"	"28209"	"28184"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"20.5"	""	"23.9"	""	"30.4"	""	"36.4"	"31.7"	""	"1145"	"59"	"37.000"	"30.000"	"7.88452420941784E-05"	""	"0"	"2.977E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVPGESVYGEK"	"[K].nLVPGESVYGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"875.49274"	"1749.97820"	"1749.97872"	"-0.30"	"-0.00026"	"9/120"	"9"	"120"	"157724.812011719"	"HCD"	"MS2"	"51.82521"	"11.0"	"100.000"	"83.0214"	"28744"	"28744"	"28720"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"11.7"	""	"14.2"	""	"17.0"	""	"20.2"	"23.6"	""	"1049"	"18"	"37.000"	"30.000"	"0.806762108838942"	"14"	"0.0001991"	"0.004487"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVPGESVYGEK"	"[K].nLVPGESVYGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"3"	"875.49329"	"1749.97930"	"1749.97872"	"0.33"	"0.00029"	"5/120"	"5"	"120"	"84470.8803710938"	"HCD"	"MS2"	"47.1925"	"6.2"	"100.000"	"83.0613"	"28732"	"28732"	"28706"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"6.3"	""	"5.2"	""	"9.4"	""	"14.5"	"14.0"	""	"1054"	"3"	"37.000"	"30.000"	"27.657353155163"	"15"	"0.003317"	"0.03643"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVPGESVYGEK"	"[K].nLVPGESVYGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"583.99811"	"1749.97977"	"1749.97872"	"0.60"	"0.00035"	"7/120"	"7"	"120"	"253614.375488281"	"HCD"	"MS2"	"28.39481"	"13.9"	"100.000"	"83.1260"	"28758"	"28758"	"28738"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.5"	""	"17.5"	""	"22.0"	""	"21.4"	""	"29.2"	"20.9"	""	"1032"	"11"	"37.000"	"30.000"	"4.30179491263731"	"15"	"0.001348"	"0.01124"	"0.231"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLVPGESVYGEK"	"[K].nLVPGESVYGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"P22509"	"rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"583.99921"	"1749.98307"	"1749.97872"	"2.48"	"0.00145"	"10/120"	"10"	"120"	"497479.129089355"	"HCD"	"MS2"	"26.48881"	"16.5"	"100.000"	"83.0538"	"28757"	"28757"	"28732"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"20.1"	""	"26.5"	""	"21.1"	""	"31.4"	"31.8"	""	"1045"	"27"	"37.000"	"30.000"	"0.0950793698623717"	"14"	"0.0001991"	"0.002641"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMAEAFAGEIPK"	"[R].eMAEAFAGEIPk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"875.97620"	"1750.94512"	"1750.94498"	"0.08"	"0.00007"	"6/104"	"6"	"104"	"98238.4119262695"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"106.5253"	"38201"	"38201"	"38192"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.0"	""	"9.0"	""	"6.6"	""	"8.2"	""	"10.2"	"12.4"	""	"1240"	"17"	"37.000"	"30.000"	"1.33472467552911"	"16"	"0.0001991"	"0.004867"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMAEAFAGEIPK"	"[R].eMAEAFAGEIPk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"875.97681"	"1750.94634"	"1750.94498"	"0.78"	"0.00068"	"7/104"	"7"	"104"	"93747.9973144531"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"106.2353"	"38068"	"38068"	"38053"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"7.9"	""	"8.6"	""	"8.5"	""	"12.8"	"10.7"	""	"1234"	"37"	"37.000"	"30.000"	"0.0130702882044832"	"18"	"9.9E-05"	"0.0007032"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETFEDSNLLPK"	"[R].eTFEDSNLLPk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"P49088"	"Asparagine synthetase [glutamine-hydrolyzing] OS=Rattus norvegicus OX=10116 GN=Asns PE=2 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.98529"	"1750.96330"	"1750.96274"	"0.32"	"0.00028"	"6/98"	"6"	"98"	"92101.4996948242"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"100.1658"	"35660"	"35660"	"35633"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.0"	""	"8.3"	""	"7.6"	""	"11.5"	""	"16.3"	"15.3"	""	"1140"	"19"	"37.000"	"30.000"	"0.790450822456977"	"14"	"0.004998"	"0.06317"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"584.32642"	"1750.96469"	"1750.96611"	"-0.81"	"-0.00047"	"14/106"	"14"	"106"	"484391.781738281"	"HCD"	"MS2"	"8.124832"	"14.8"	"100.000"	"108.9671"	"39126"	"39126"	"39120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"16.6"	""	"14.5"	""	"32.0"	""	"28.6"	"28.7"	""	"1103"	"49"	"37.000"	"30.000"	"0.000710469627758763"	"20"	"0"	"1.423E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"875.98608"	"1750.96489"	"1750.96611"	"-0.69"	"-0.00061"	"7/106"	"7"	"106"	"118271.362243652"	"HCD"	"MS2"	"10.50575"	"9.2"	"100.000"	"108.9763"	"39130"	"39130"	"39120"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.5"	""	"10.9"	""	"10.6"	""	"17.2"	""	"15.7"	"16.8"	""	"1102"	"35"	"37.000"	"30.000"	"0.01955021774677"	"19"	"0"	"8.329E-05"	"0.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"584.32703"	"1750.96653"	"1750.96611"	"0.24"	"0.00014"	"12/106"	"12"	"106"	"1110852.17492676"	"HCD"	"MS2"	"4.927138"	"30.5"	"100.000"	"108.7266"	"39022"	"39022"	"39018"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"28.5"	""	"36.8"	""	"53.5"	"1.7"	"61.4"	"59.6"	""	"1129"	"53"	"37.000"	"30.000"	"0.000295572446452656"	"22"	"0"	"4.515E-06"	"0.931"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"875.98718"	"1750.96709"	"1750.96611"	"0.56"	"0.00049"	"6/106"	"6"	"106"	"117572.352905273"	"HCD"	"MS2"	"10.1862"	"8.8"	"100.000"	"109.2399"	"39228"	"39228"	"39220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"6.8"	""	"9.3"	""	"11.9"	""	"24.2"	"22.2"	""	"1125"	"45"	"37.000"	"30.000"	"0.00169872284272613"	"24"	"0"	"0.000207"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"875.98724"	"1750.96721"	"1750.96611"	"0.63"	"0.00055"	"6/106"	"6"	"106"	"157399.029052734"	"HCD"	"MS2"	"8.394954"	"12.4"	"100.000"	"108.9196"	"39095"	"39095"	"39087"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"10.6"	""	"14.0"	""	"23.9"	""	"26.8"	"27.0"	""	"1127"	"39"	"37.000"	"30.000"	"0.00706145052079487"	"19"	"0.0001686"	"0.001489"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"875.98749"	"1750.96770"	"1750.96611"	"0.91"	"0.00080"	"6/106"	"6"	"106"	"128629.434997559"	"HCD"	"MS2"	"12.55152"	"9.5"	"100.000"	"108.6568"	"38995"	"38995"	"38982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	"2.1"	"7.5"	""	"11.2"	""	"18.7"	""	"19.1"	"20.0"	""	"1134"	"42"	"37.000"	"30.000"	"0.00340081540236874"	"15"	"0.0001991"	"0.002434"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWFEPLVEDMQR"	"[K].gWFEPLVEDmQR.[Q]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.43481"	"1751.86235"	"1751.86242"	"-0.04"	"-0.00004"	"9/100"	"9"	"100"	"127040.349243164"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"111.1759"	"39985"	"39985"	"39959"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"7.0"	""	"4.5"	""	"12.3"	""	"13.8"	"18.6"	""	"681"	"16"	"35.000"	"28.000"	"0.931359001307435"	"13"	"0.003043"	"0.03277"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"584.64575"	"1751.92270"	"1751.92497"	"-1.29"	"-0.00076"	"9/114"	"9"	"114"	"991876.425537109"	"HCD"	"MS2"	"60.41742"	"38.3"	"100.000"	"72.1073"	"24322"	"24322"	"24298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.0"	""	"41.5"	""	"48.3"	""	"58.3"	""	"80.4"	"76.3"	""	"1112"	"30"	"37.000"	"30.000"	"0.0535888937134927"	"20"	"0"	"8.855E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.8723"	"0.0000"	"1"	"1"	"1"	"876.46552"	"1751.92375"	"1751.92497"	"-0.69"	"-0.00061"	"7/114"	"7"	"114"	"162518.541259766"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"72.0703"	"24307"	"24307"	"24282"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"11.9"	""	"13.8"	""	"19.8"	""	"38.0"	"28.9"	""	"1121"	"47"	"37.000"	"30.000"	"0.00103651506093721"	"22"	"0"	"3.267E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"584.64618"	"1751.92398"	"1751.92497"	"-0.56"	"-0.00033"	"10/114"	"10"	"114"	"944573.38659668"	"HCD"	"MS2"	"42.79107"	"34.5"	"100.000"	"72.0055"	"24254"	"24254"	"24238"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"37.0"	""	"44.5"	""	"55.9"	""	"72.6"	"60.7"	""	"1122"	"35"	"37.000"	"30.000"	"0.0187915611367541"	"19"	"0"	"3.696E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTANEVEAVK"	"[K].mDSTANEVEAVk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"876.46582"	"1751.92436"	"1751.92497"	"-0.35"	"-0.00030"	"13/114"	"13"	"114"	"176822.419433594"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"71.9391"	"24227"	"24227"	"24207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"11.3"	""	"15.7"	""	"17.9"	""	"44.6"	"26.4"	""	"1124"	"35"	"37.000"	"30.000"	"0.0196216857298965"	"24"	"9.9E-05"	"0.000668"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSPEEEK"	"[K].dLLHPSPEEEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.65649"	"1751.95493"	"1751.95799"	"-1.74"	"-0.00102"	"10/98"	"10"	"98"	"1938576.55944824"	"HCD"	"MS2"	"19.19715"	"60.9"	"100.000"	"54.9228"	"17356"	"17356"	"17332"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"86.2"	""	"68.2"	""	"74.8"	""	"108.3"	""	"136.5"	"107.7"	""	"1143"	"31"	"37.000"	"30.000"	"0.0439558046623798"	"14"	"0.0001686"	"0.001417"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSPEEEK"	"[K].dLLHPSPEEEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"584.65735"	"1751.95749"	"1751.95799"	"-0.28"	"-0.00016"	"6/98"	"6"	"98"	"2037862.18060303"	"HCD"	"MS2"	"34.90383"	"58.3"	"100.000"	"55.2977"	"17475"	"17475"	"17450"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"89.6"	""	"68.3"	""	"74.2"	""	"101.5"	""	"112.6"	"110.3"	""	"1132"	"39"	"37.000"	"30.000"	"0.00702775206097304"	"20"	"9.9E-05"	"0.0005318"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSPEEEK"	"[K].dLLHPSPEEEk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"Q71TY3"	"40S ribosomal protein S27 OS=Rattus norvegicus OX=10116 GN=Rps27 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.65741"	"1751.95768"	"1751.95799"	"-0.18"	"-0.00010"	"10/98"	"10"	"98"	"1208227.58093262"	"HCD"	"MS2"	"29.23298"	"49.4"	"100.000"	"55.6130"	"17604"	"17604"	"17576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.1"	""	"69.0"	""	"67.5"	""	"78.8"	"1.2"	"91.2"	"89.7"	""	"1160"	"32"	"37.000"	"30.000"	"0.033298754808025"	"15"	"9.9E-05"	"0.0004963"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIQSVEPYTK"	"[K].tQIQSVEPYTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.8108"	"0.0000"	"1"	"1"	"1"	"876.50018"	"1751.99309"	"1751.99437"	"-0.73"	"-0.00064"	"10/116"	"10"	"116"	"109418.765014648"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"68.3341"	"22762"	"22762"	"22732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"10.3"	""	"12.5"	""	"13.2"	""	"17.4"	"15.2"	""	"994"	"37"	"36.000"	"29.000"	"0.00973545802732478"	"22"	"9.9E-05"	"0.0009326"	"0.454"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQIQSVEPYTK"	"[K].tQIQSVEPYTk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"P52631"	"Signal transducer and activator of transcription 3 OS=Rattus norvegicus OX=10116 GN=Stat3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"876.50055"	"1751.99382"	"1751.99437"	"-0.31"	"-0.00027"	"7/116"	"7"	"116"	"103870.130493164"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"68.4067"	"22824"	"22824"	"22794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.0"	""	"13.8"	""	"13.7"	""	"13.2"	""	"19.0"	"18.1"	""	"989"	"18"	"36.000"	"29.000"	"0.728058532452979"	"19"	"0.006958"	"0.08751"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNEWVGYDNIK"	"[K].gNEWVGYDNIk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.96930"	"1752.93132"	"1752.93211"	"-0.45"	"-0.00039"	"11/108"	"11"	"108"	"216306.776855469"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"92.3032"	"32487"	"32487"	"32465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.7"	""	"33.4"	""	"32.7"	""	"30.1"	""	"39.8"	"47.2"	""	"1134"	"25"	"37.000"	"30.000"	"0.174414689395798"	"14"	"0.0001991"	"0.002094"	"0.382"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNEWVGYDNIK"	"[K].gNEWVGYDNIk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"Q6RY07"	"Acidic mammalian chitinase OS=Rattus norvegicus OX=10116 GN=Chia PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"876.96973"	"1752.93218"	"1752.93211"	"0.04"	"0.00004"	"8/108"	"8"	"108"	"223112.843688965"	"HCD"	"MS2"	"0"	"22.0"	"100.000"	"92.4216"	"32500"	"32500"	"32473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"32.5"	""	"26.2"	""	"29.2"	""	"43.6"	"52.1"	""	"1127"	"30"	"37.000"	"30.000"	"0.0620717400926587"	"14"	"0.0001991"	"0.003079"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYSTEPNNLK"	"[K].qTYSTEPNNLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.8205"	"0.0000"	"1"	"1"	"1"	"876.97943"	"1752.95159"	"1752.95323"	"-0.94"	"-0.00082"	"11/108"	"11"	"108"	"215997.970031738"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"47.7473"	"14441"	"14441"	"14410"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.4"	""	"19.3"	""	"26.8"	""	"24.4"	""	"37.2"	"21.3"	""	"1123"	"39"	"37.000"	"30.000"	"0.00700405843247413"	"22"	"0"	"0.000308"	"0.553"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYSTEPNNLK"	"[K].qTYSTEPNNLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"584.98920"	"1752.95304"	"1752.95323"	"-0.11"	"-0.00007"	"12/108"	"12"	"108"	"1422573.41052246"	"HCD"	"MS2"	"32.5794"	"51.3"	"100.000"	"47.6989"	"14421"	"14421"	"14394"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"76.4"	""	"67.9"	""	"67.2"	""	"87.1"	""	"104.7"	"85.6"	""	"1117"	"50"	"37.000"	"30.000"	"0.000503527480352927"	"19"	"0"	"0.000172"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYSTEPNNLK"	"[K].qTYSTEPNNLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"584.98920"	"1752.95304"	"1752.95323"	"-0.11"	"-0.00007"	"12/108"	"12"	"108"	"2151542.71588135"	"HCD"	"MS2"	"13.36686"	"92.7"	"100.000"	"48.1227"	"14556"	"14556"	"14525"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"133.7"	""	"98.4"	""	"116.4"	""	"154.3"	"0.1"	"191.2"	"185.9"	""	"1117"	"46"	"37.000"	"30.000"	"0.00143887536618594"	"15"	"9.9E-05"	"0.0004234"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QTYSTEPNNLK"	"[K].qTYSTEPNNLk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"P17702"	"60S ribosomal protein L28 OS=Rattus norvegicus OX=10116 GN=Rpl28 PE=1 SV=4"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"876.98102"	"1752.95476"	"1752.95323"	"0.87"	"0.00076"	"11/108"	"11"	"108"	"194587.114440918"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"48.1619"	"14572"	"14572"	"14541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"20.7"	""	"22.6"	""	"28.6"	""	"36.5"	"23.0"	""	"1134"	"35"	"37.000"	"30.000"	"0.0186888706804619"	"25"	"9.9E-05"	"0.0004984"	"0.51"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENYNQEWWSLR"	"[K].eNYNQEWWSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"877.42773"	"1753.84819"	"1753.84955"	"-0.77"	"-0.00068"	"9/114"	"9"	"114"	"168791.154907227"	"HCD"	"MS2"	"27.50777"	"12.2"	"100.000"	"104.5870"	"37414"	"37414"	"37387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"13.4"	""	"12.4"	""	"22.9"	""	"22.2"	"30.6"	""	"686"	"16"	"35.000"	"28.000"	"0.949060984376148"	"13"	"0.0001991"	"0.002532"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENYNQEWWSLR"	"[K].eNYNQEWWSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"877.42841"	"1753.84953"	"1753.84955"	"-0.01"	"-0.00001"	"8/114"	"8"	"114"	"203818.159606934"	"HCD"	"MS2"	"0"	"16.1"	"100.000"	"104.8703"	"37525"	"37525"	"37518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"17.1"	""	"14.9"	""	"25.3"	""	"40.9"	"35.8"	""	"692"	"38"	"35.000"	"28.000"	"0.00576867535542668"	"15"	"0"	"7.035E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENYNQEWWSLR"	"[K].eNYNQEWWSLR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"P47820"	"Angiotensin-converting enzyme OS=Rattus norvegicus OX=10116 GN=Ace PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"877.42859"	"1753.84990"	"1753.84955"	"0.20"	"0.00018"	"5/114"	"5"	"114"	"263818.73236084"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"105.1057"	"37638"	"37638"	"37625"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"18.7"	""	"17.5"	""	"36.0"	""	"44.7"	"39.7"	""	"702"	"21"	"35.000"	"28.000"	"0.29737682236335"	"14"	"9.9E-05"	"0.0006457"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HMNGYGSHTFK"	"[R].hmnGYGSHTFk.[L]"	"N-Term(TMT6plex); M2(Oxidation); N3(Deamidated); K11(TMT6plex)"	"1"	"1"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"P04762"	"Catalase OS=Rattus norvegicus OX=10116 GN=Cat PE=1 SV=3"	"0"	"4"	"4"	"0.9200"	"0.0000"	"1"	"1"	"1"	"439.22382"	"1753.87343"	"1753.87321"	"0.13"	"0.00006"	"12/100"	"12"	"100"	"3350208.91351318"	"HCD"	"MS2"	"6.103902"	"126.9"	"100.000"	"29.9691"	"7210"	"7210"	"7188"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"190.7"	""	"165.7"	""	"173.8"	""	"250.1"	"3.2"	"202.0"	"215.2"	""	"872"	"25"	"36.000"	"29.000"	"0.143379311061929"	"16"	"0"	"0.0003772"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEEAPESYK"	"[K].lVMEEAPESYk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"877.47687"	"1753.94646"	"1753.94464"	"1.03"	"0.00091"	"9/90"	"9"	"90"	"115163.876342773"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"92.9865"	"32724"	"32724"	"32696"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"11.7"	""	"15.7"	""	"10.0"	""	"16.8"	"21.4"	""	"1140"	"21"	"37.000"	"30.000"	"0.431394750161956"	"16"	"0.0001991"	"0.002993"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVMEEAPESYK"	"[K].lVMEEAPESYk.[N]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"Q6AYT3"	"tRNA-splicing ligase RtcB homolog OS=Rattus norvegicus OX=10116 GN=Rtcb PE=2 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"877.47687"	"1753.94646"	"1753.94464"	"1.03"	"0.00091"	"4/90"	"4"	"90"	"114869.991760254"	"HCD"	"MS2"	"0"	"10.5"	"100.000"	"92.9292"	"32737"	"32737"	"32707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"15.3"	""	"12.7"	""	"11.9"	""	"20.5"	"22.6"	""	"1140"	"12"	"37.000"	"30.000"	"3.79205699034993"	"15"	"0.003357"	"0.03745"	"0.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPPLWEEDPGAK"	"[K].gPPLWEEDPGAk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"Q5I0H9"	"Protein disulfide-isomerase A5 OS=Rattus norvegicus OX=10116 GN=Pdia5 PE=2 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"877.47949"	"1753.95171"	"1753.95251"	"-0.46"	"-0.00040"	"5/92"	"5"	"92"	"136381.909729004"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"92.2234"	"32420"	"32420"	"32391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"16.4"	""	"17.0"	""	"16.7"	""	"21.4"	"18.4"	""	"1123"	"9"	"37.000"	"30.000"	"6.76627680518765"	"16"	"0.009514"	"0.1277"	"0.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLPALEEKPR"	"[K].qDLPALEEkPR.[N]"	"N-Term(TMT6plex); K9(TMT6plex)"	"1"	"1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"O88600"	"Heat shock 70 kDa protein 4 OS=Rattus norvegicus OX=10116 GN=Hspa4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"585.34473"	"1754.01963"	"1754.02125"	"-0.93"	"-0.00054"	"11/112"	"11"	"112"	"1343870.5065918"	"HCD"	"MS2"	"21.4682"	"59.9"	"100.000"	"61.6059"	"20065"	"20065"	"20038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.4"	""	"55.8"	""	"61.4"	""	"94.3"	"0.2"	"128.7"	"121.7"	""	"675"	"27"	"35.000"	"28.000"	"0.0695462595728625"	"14"	"0"	"3.028E-06"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQGEDLPHPK"	"[K].iYQGEDLPHPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"585.66583"	"1754.98294"	"1754.98414"	"-0.68"	"-0.00040"	"13/98"	"13"	"98"	"1112806.9107666"	"HCD"	"MS2"	"19.42685"	"37.2"	"100.000"	"65.3620"	"21557"	"21557"	"21535"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"44.1"	""	"46.9"	""	"53.9"	"0.3"	"83.1"	"72.5"	""	"986"	"27"	"36.000"	"29.000"	"0.0886843361158493"	"22"	"0"	"0.0003375"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQGEDLPHPK"	"[K].iYQGEDLPHPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"585.66595"	"1754.98331"	"1754.98414"	"-0.47"	"-0.00028"	"12/98"	"12"	"98"	"1669163.0769043"	"HCD"	"MS2"	"21.46351"	"53.3"	"100.000"	"64.7512"	"21342"	"21342"	"21323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.6"	""	"64.9"	""	"80.2"	""	"85.3"	""	"99.0"	"106.8"	""	"985"	"26"	"36.000"	"29.000"	"0.121173104504271"	"19"	"0"	"0.0001978"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQGEDLPHPK"	"[K].iYQGEDLPHPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.7879"	"0.0000"	"1"	"1"	"1"	"585.66626"	"1754.98423"	"1754.98414"	"0.05"	"0.00003"	"8/98"	"8"	"98"	"3063810.10797119"	"HCD"	"MS2"	"6.911621"	"81.5"	"100.000"	"65.0570"	"21466"	"21466"	"21449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.9"	""	"98.3"	""	"111.8"	""	"138.3"	""	"160.7"	"152.3"	""	"982"	"33"	"36.000"	"29.000"	"0.0229129755734316"	"22"	"0"	"4.188E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQGEDLPHPK"	"[K].iYQGEDLPHPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"585.66632"	"1754.98441"	"1754.98414"	"0.15"	"0.00009"	"12/98"	"12"	"98"	"1522627.40307617"	"HCD"	"MS2"	"11.03967"	"50.4"	"100.000"	"64.7297"	"21299"	"21299"	"21279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.2"	""	"60.2"	""	"72.5"	""	"84.2"	"0.2"	"94.1"	"101.2"	""	"982"	"29"	"36.000"	"29.000"	"0.0566345549590157"	"23"	"0"	"0.0002869"	"0.56"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQGEDLPHPK"	"[K].iYQGEDLPHPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"585.66650"	"1754.98496"	"1754.98414"	"0.47"	"0.00027"	"9/98"	"9"	"98"	"3094540.86816406"	"HCD"	"MS2"	"10.81698"	"85.7"	"100.000"	"65.0515"	"21430"	"21430"	"21410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"120.8"	""	"101.3"	""	"115.9"	""	"146.9"	""	"164.6"	"162.8"	""	"977"	"42"	"36.000"	"29.000"	"0.00313230878161851"	"22"	"0"	"3.799E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IYQGEDLPHPK"	"[K].iYQGEDLPHPk.[S]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"Q0ZHH6"	"Atlastin-3 OS=Rattus norvegicus OX=10116 GN=Atl3 PE=2 SV=2"	"0"	"3"	"3"	"0.7429"	"0.0000"	"1"	"1"	"1"	"585.66663"	"1754.98532"	"1754.98414"	"0.67"	"0.00039"	"14/98"	"14"	"98"	"1495850.19525146"	"HCD"	"MS2"	"17.21792"	"45.1"	"100.000"	"65.3517"	"21586"	"21586"	"21568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.2"	""	"44.0"	""	"65.2"	""	"69.3"	""	"96.6"	"92.2"	""	"970"	"35"	"36.000"	"29.000"	"0.0166242376475028"	"24"	"0"	"9.093E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46375"	"1755.92021"	"1755.92271"	"-1.42"	"-0.00125"	"5/138"	"5"	"138"	"78664.5883789063"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"103.7498"	"37080"	"37080"	"37058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.7"	""	"4.2"	""	"5.8"	""	"4.9"	""	"5.3"	"5.3"	""	"1053"	"5"	"37.000"	"30.000"	"16.0471671203913"	"13"	"0.007522"	"0.09613"	"0.033"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"878.46411"	"1755.92095"	"1755.92271"	"-1.01"	"-0.00088"	"4/138"	"4"	"138"	"123727.74407959"	"HCD"	"MS2"	"10.46433"	"6.5"	"100.000"	"103.4318"	"36951"	"36951"	"36930"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"8.5"	""	"8.2"	""	"9.4"	""	"13.0"	"14.3"	""	"1051"	"12"	"37.000"	"30.000"	"2.97558746389602"	"15"	"0.0005161"	"0.006766"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.7727"	"0.0000"	"1"	"1"	"1"	"878.46417"	"1755.92107"	"1755.92271"	"-0.94"	"-0.00082"	"8/138"	"8"	"138"	"151856.218994141"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"99.3945"	"35318"	"35318"	"35294"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.9"	""	"6.4"	""	"11.3"	""	"8.9"	""	"14.9"	"17.9"	""	"1047"	"22"	"37.000"	"30.000"	"0.345077534160402"	"19"	"0.0001991"	"0.002341"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.6250"	"0.0000"	"1"	"1"	"1"	"878.46429"	"1755.92131"	"1755.92271"	"-0.80"	"-0.00070"	"5/138"	"5"	"138"	"68313.9881591797"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"100.4970"	"35767"	"35767"	"35740"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.0"	""	"2.5"	""	"3.9"	""	"5.9"	""	"6.8"	"9.6"	""	"1048"	"8"	"37.000"	"30.000"	"7.64418672384283"	"16"	"0.002166"	"0.02007"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"878.46429"	"1755.92131"	"1755.92271"	"-0.80"	"-0.00070"	"6/138"	"6"	"138"	"131732.43548584"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"99.4372"	"35364"	"35364"	"35343"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"5.9"	""	"9.0"	""	"5.7"	""	"10.0"	"11.0"	""	"1048"	"18"	"37.000"	"30.000"	"0.906423772228713"	"15"	"0.0001991"	"0.004918"	"0.305"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8636"	"0.0000"	"1"	"1"	"1"	"878.46429"	"1755.92131"	"1755.92271"	"-0.80"	"-0.00070"	"10/138"	"10"	"138"	"296195.580627441"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"95.4153"	"33709"	"33709"	"33681"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"14.7"	""	"8.8"	""	"19.4"	""	"20.8"	"21.1"	""	"1048"	"22"	"37.000"	"30.000"	"0.362519428761522"	"17"	"0.0001991"	"0.003023"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"878.46442"	"1755.92156"	"1755.92271"	"-0.66"	"-0.00058"	"11/138"	"11"	"138"	"268389.446594238"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"95.4175"	"33742"	"33742"	"33724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.9"	""	"12.1"	""	"9.8"	""	"11.7"	""	"20.1"	"19.8"	""	"1036"	"37"	"37.000"	"30.000"	"0.0111257618559962"	"20"	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"878.46454"	"1755.92180"	"1755.92271"	"-0.52"	"-0.00046"	"7/138"	"7"	"138"	"144509.313537598"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"96.2829"	"34092"	"34092"	"34073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.9"	""	"2.8"	""	"9.6"	""	"9.4"	""	"10.4"	"14.9"	""	"1037"	"14"	"37.000"	"30.000"	"1.90874872833653"	"15"	"0.001217"	"0.009459"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9077"	"0.0000"	"1"	"1"	"1"	"878.46466"	"1755.92204"	"1755.92271"	"-0.38"	"-0.00033"	"12/138"	"12"	"138"	"946430.501159668"	"HCD"	"MS2"	"0"	"31.3"	"100.000"	"103.1065"	"36824"	"36824"	"36810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.0"	""	"36.6"	""	"38.9"	""	"56.2"	""	"61.5"	"62.9"	""	"1043"	"65"	"37.000"	"30.000"	"1.62650091810499E-05"	"22"	"0"	"3.011E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"585.97900"	"1755.92246"	"1755.92271"	"-0.15"	"-0.00009"	"16/138"	"16"	"138"	"3157848.68792725"	"HCD"	"MS2"	"4.953553"	"29.8"	"100.000"	"102.7959"	"36719"	"36719"	"36705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"36.3"	""	"40.0"	""	"43.6"	"1.9"	"62.2"	"56.6"	""	"1033"	"42"	"37.000"	"30.000"	"0.00337341930442419"	"19"	"0"	"4.252E-06"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"585.97906"	"1755.92264"	"1755.92271"	"-0.04"	"-0.00002"	"17/138"	"17"	"138"	"4073895.82330322"	"HCD"	"MS2"	"4.480437"	"36.4"	"100.000"	"102.5874"	"36612"	"36612"	"36593"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.5"	""	"44.8"	""	"52.9"	""	"63.2"	""	"72.0"	"68.1"	""	"1033"	"48"	"37.000"	"30.000"	"0.000798123918021591"	"20"	"0"	"3.229E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.7857"	"0.0000"	"1"	"1"	"1"	"878.46497"	"1755.92266"	"1755.92271"	"-0.03"	"-0.00003"	"7/138"	"7"	"138"	"116180.611022949"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"96.3248"	"34077"	"34077"	"34050"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.4"	""	"2.9"	""	"8.9"	""	"7.5"	""	"9.7"	"8.1"	""	"1030"	"15"	"37.000"	"30.000"	"1.82728895455291"	"16"	"0.0001991"	"0.004477"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46509"	"1755.92290"	"1755.92271"	"0.11"	"0.00009"	"5/138"	"5"	"138"	"99550.3046875"	"HCD"	"MS2"	"17.9893"	"2.8"	"100.000"	"104.1656"	"37248"	"37248"	"37220"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.3"	""	"4.7"	""	"1.6"	""	"5.9"	""	"4.4"	"6.0"	""	"1030"	"2"	"37.000"	"30.000"	"29.3634600224585"	"13"	"0.001999"	"0.0175"	"0.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9677"	"0.0000"	"1"	"1"	"1"	"878.46515"	"1755.92302"	"1755.92271"	"0.18"	"0.00015"	"10/138"	"10"	"138"	"179388.092895508"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"103.5846"	"37029"	"37029"	"37015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"7.9"	""	"8.8"	""	"10.9"	""	"14.6"	"12.8"	""	"1030"	"31"	"37.000"	"30.000"	"0.0365432550501145"	"16"	"0.0001991"	"0.001979"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8413"	"0.0000"	"1"	"1"	"1"	"878.46515"	"1755.92302"	"1755.92271"	"0.18"	"0.00015"	"12/138"	"12"	"138"	"1773405.74957275"	"HCD"	"MS2"	"0.5163958"	"52.5"	"100.000"	"95.9922"	"33975"	"33975"	"33963"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.7"	""	"66.7"	""	"58.9"	""	"95.7"	""	"105.6"	"118.5"	""	"1030"	"63"	"37.000"	"30.000"	"2.81065298462004E-05"	"26"	"0"	"1.406E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46521"	"1755.92314"	"1755.92271"	"0.24"	"0.00021"	"5/138"	"5"	"138"	"60574.135559082"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"104.2831"	"37312"	"37312"	"37288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.8"	""	""	""	"3.5"	""	"2.4"	""	"2.6"	"5.1"	""	"1028"	"9"	"37.000"	"30.000"	"6.65216662505292"	"13"	"0.005507"	"0.06943"	"0.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46521"	"1755.92314"	"1755.92271"	"0.24"	"0.00021"	"4/138"	"4"	"138"	"80902.05078125"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"99.7312"	"35455"	"35455"	"35429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.3"	""	"2.1"	""	"5.5"	""	"2.6"	""	"5.0"	"6.7"	""	"1028"	"12"	"37.000"	"30.000"	"3.31103002474801"	"13"	"0.0007633"	"0.007416"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46521"	"1755.92314"	"1755.92271"	"0.24"	"0.00021"	"13/138"	"13"	"138"	"673839.999694824"	"HCD"	"MS2"	"0"	"23.5"	"100.000"	"102.4906"	"36573"	"36573"	"36554"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.3"	""	"32.5"	""	"26.4"	""	"40.7"	""	"44.4"	"46.5"	""	"1028"	"22"	"37.000"	"30.000"	"0.320599705437964"	"14"	"0.0001991"	"0.002022"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"585.97925"	"1755.92319"	"1755.92271"	"0.27"	"0.00016"	"16/138"	"16"	"138"	"7073951.73168945"	"HCD"	"MS2"	"3.616513"	"49.5"	"100.000"	"102.8781"	"36731"	"36731"	"36714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"63.8"	""	"63.4"	""	"76.1"	""	"95.6"	"113.8"	""	"1029"	"48"	"37.000"	"30.000"	"0.000906536675878783"	"21"	"0"	"6.296E-06"	"0.901"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8542"	"0.0000"	"1"	"1"	"1"	"878.46527"	"1755.92327"	"1755.92271"	"0.31"	"0.00028"	"10/138"	"10"	"138"	"1145893.05987549"	"HCD"	"MS2"	"0"	"35.7"	"100.000"	"95.9995"	"33946"	"33946"	"33929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"48.3"	""	"39.8"	""	"49.8"	""	"78.8"	"85.6"	""	"1029"	"48"	"37.000"	"30.000"	"0.000738559313460456"	"23"	"0"	"0.0002583"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"878.46533"	"1755.92339"	"1755.92271"	"0.38"	"0.00034"	"12/138"	"12"	"138"	"1392391.35534668"	"HCD"	"MS2"	"0"	"43.6"	"100.000"	"103.2917"	"36912"	"36912"	"36898"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.4"	""	"60.7"	""	"59.8"	""	"66.9"	"1.4"	"79.6"	"89.2"	""	"1028"	"68"	"37.000"	"30.000"	"7.88793129158837E-06"	"29"	"0"	"4.901E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"878.46533"	"1755.92339"	"1755.92271"	"0.38"	"0.00034"	"13/138"	"13"	"138"	"11948778.4516602"	"HCD"	"MS2"	"0"	"236.5"	"66.903"	"103.0011"	"36802"	"36802"	"36786"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"330.5"	""	"303.0"	""	"301.1"	""	"379.9"	"1.6"	"442.0"	"484.5"	""	"1028"	"72"	"37.000"	"30.000"	"3.55601119052334E-06"	"23"	"0"	"1.764E-08"	"1.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8784"	"0.0000"	"1"	"1"	"1"	"878.46539"	"1755.92351"	"1755.92271"	"0.45"	"0.00040"	"13/138"	"13"	"138"	"5990149.16674805"	"HCD"	"MS2"	"0"	"156.5"	"100.000"	"95.7199"	"33865"	"33865"	"33851"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"180.1"	""	"196.3"	""	"178.4"	""	"266.0"	"4.8"	"313.0"	"348.1"	""	"1030"	"74"	"37.000"	"30.000"	"1.96701299482624E-06"	"26"	"0"	"1.621E-08"	"1.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"585.97937"	"1755.92356"	"1755.92271"	"0.48"	"0.00028"	"14/138"	"14"	"138"	"7688730.77160645"	"HCD"	"MS2"	"2.55419"	"48.0"	"77.641"	"95.8906"	"33934"	"33934"	"33922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.3"	""	"59.7"	""	"63.4"	""	"76.3"	"0.7"	"99.0"	"103.4"	""	"1034"	"46"	"37.000"	"30.000"	"0.00133502851855809"	"21"	"0"	"7.086E-06"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"585.97937"	"1755.92356"	"1755.92271"	"0.48"	"0.00028"	"17/138"	"17"	"138"	"7397875.71044922"	"HCD"	"MS2"	"1.326275"	"61.5"	"100.000"	"95.6115"	"33821"	"33821"	"33807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"71.2"	""	"86.7"	""	"103.7"	""	"124.4"	"128.1"	""	"1034"	"44"	"37.000"	"30.000"	"0.00219528314560244"	"24"	"0"	"1.2E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"585.97943"	"1755.92374"	"1755.92271"	"0.58"	"0.00034"	"15/138"	"15"	"138"	"5711569.90734863"	"HCD"	"MS2"	"2.770057"	"59.0"	"100.000"	"95.9209"	"33914"	"33914"	"33897"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.6"	""	"76.9"	""	"77.7"	""	"104.4"	"1.0"	"117.9"	"119.9"	""	"1042"	"45"	"37.000"	"30.000"	"0.00151997947429461"	"19"	"0"	"4.162E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"878.46552"	"1755.92375"	"1755.92271"	"0.59"	"0.00052"	"13/138"	"13"	"138"	"12558385.1959229"	"HCD"	"MS2"	"0"	"214.6"	"63.484"	"102.8020"	"36700"	"36700"	"36683"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"298.5"	""	"257.1"	""	"277.8"	""	"371.2"	""	"419.7"	"411.1"	""	"1042"	"70"	"37.000"	"30.000"	"5.17413461227307E-06"	"24"	"0"	"2.108E-08"	"1.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"878.46558"	"1755.92388"	"1755.92271"	"0.66"	"0.00058"	"13/138"	"13"	"138"	"6090002.434021"	"HCD"	"MS2"	"0"	"155.6"	"100.000"	"95.7016"	"33825"	"33825"	"33808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.5"	""	"199.1"	""	"185.6"	""	"250.1"	"2.1"	"330.5"	"334.8"	""	"1039"	"78"	"37.000"	"30.000"	"8.86309801087123E-07"	"25"	"0"	"6.8E-09"	"1.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"878.46588"	"1755.92449"	"1755.92271"	"1.01"	"0.00089"	"13/138"	"13"	"138"	"438861.312438965"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"102.6961"	"36679"	"36679"	"36660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"17.5"	""	"16.7"	""	"28.3"	""	"31.5"	"32.2"	""	"1062"	"26"	"37.000"	"30.000"	"0.138068472804076"	"18"	"0.0001991"	"0.003453"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"585.97968"	"1755.92447"	"1755.92271"	"1.00"	"0.00059"	"13/138"	"13"	"138"	"7864733.82720947"	"HCD"	"MS2"	"3.464157"	"54.8"	"100.000"	"103.0843"	"36835"	"36835"	"36825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.4"	""	"71.4"	""	"71.8"	""	"91.8"	"3.3"	"110.3"	"98.3"	""	"1062"	"47"	"37.000"	"30.000"	"0.00115105087965926"	"21"	"0"	"7.986E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"585.97968"	"1755.92447"	"1755.92271"	"1.00"	"0.00059"	"14/138"	"14"	"138"	"8792083.62976074"	"HCD"	"MS2"	"2.480881"	"69.8"	"100.000"	"95.6232"	"33793"	"33793"	"33777"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.4"	""	"91.2"	""	"85.1"	""	"125.9"	""	"140.2"	"148.0"	""	"1062"	"48"	"37.000"	"30.000"	"0.000861181161697592"	"22"	"0"	"7.191E-06"	"0.889"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPQGDPWDSVAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"878.46625"	"1755.92522"	"1755.92271"	"1.43"	"0.00125"	"5/138"	"5"	"138"	"104665.881225586"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"99.7420"	"35487"	"35487"	"35466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.8"	""	"7.2"	""	"6.3"	""	"5.1"	""	"10.5"	"7.5"	""	"1070"	"14"	"37.000"	"30.000"	"2.27695151026553"	"15"	"0.001348"	"0.01107"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNGYLGPDQSK"	"[K].aFnGYLGPDQSk.[W]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"878.46887"	"1755.93047"	"1755.93177"	"-0.74"	"-0.00065"	"11/110"	"11"	"110"	"207099.914428711"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"89.7887"	"31474"	"31474"	"31460"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"23.1"	""	"27.7"	""	"26.8"	""	"25.6"	"34.5"	""	"1053"	"35"	"37.000"	"30.000"	"0.0160102596601856"	"15"	"9.9E-05"	"0.0007791"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNGYLGPDQSK"	"[K].aFnGYLGPDQSk.[W]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"0.6364"	"0.0000"	"1"	"1"	"1"	"878.46954"	"1755.93181"	"1755.93177"	"0.02"	"0.00002"	"12/110"	"12"	"110"	"300839.555725098"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"90.1287"	"31572"	"31572"	"31551"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.8"	""	"37.1"	""	"31.9"	""	"34.4"	""	"50.7"	"52.5"	""	"1035"	"33"	"37.000"	"30.000"	"0.023491478661648"	"15"	"9.9E-05"	"0.0008145"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNGYLGPDQSK"	"[K].aFnGYLGPDQSk.[W]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.46960"	"1755.93193"	"1755.93177"	"0.09"	"0.00008"	"11/110"	"11"	"110"	"133497.83404541"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"89.8060"	"31441"	"31441"	"31420"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"16.5"	""	"12.4"	""	"14.3"	""	"17.2"	"19.5"	""	"1035"	"27"	"37.000"	"30.000"	"0.102544023585414"	"14"	"0.0001991"	"0.004818"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AFNGYLGPDQSK"	"[K].aFnGYLGPDQSk.[W]"	"N-Term(TMT6plex); N3(Deamidated); K12(TMT6plex)"	"1"	"1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"B0BNE5"	"S-formylglutathione hydrolase OS=Rattus norvegicus OX=10116 GN=Esd PE=2 SV=1"	"0"	"2"	"2"	"0.9796"	"0.0000"	"1"	"1"	"1"	"878.46979"	"1755.93230"	"1755.93177"	"0.30"	"0.00026"	"13/110"	"13"	"110"	"246099.781799316"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"90.0769"	"31589"	"31589"	"31577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.7"	""	"27.7"	""	"27.6"	""	"28.2"	""	"44.4"	"40.8"	""	"1027"	"49"	"37.000"	"30.000"	"0.000590935999722968"	"16"	"0"	"8.826E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.94403"	"1756.88078"	"1756.88277"	"-1.13"	"-0.00099"	"8/96"	"8"	"96"	"377992.543212891"	"HCD"	"MS2"	"0"	"26.2"	"100.000"	"41.8158"	"12029"	"12029"	"12001"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.4"	""	"24.8"	""	"32.0"	""	"58.2"	""	"49.8"	"39.7"	""	"810"	"40"	"36.000"	"29.000"	"0.00368514875416062"	"15"	"0.0001991"	"0.002617"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.94470"	"1756.88213"	"1756.88277"	"-0.37"	"-0.00032"	"7/96"	"7"	"96"	"391664.60534668"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"41.9727"	"12059"	"12059"	"12028"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.3"	""	"22.0"	""	"32.2"	""	"68.7"	""	"50.8"	"40.7"	""	"810"	"32"	"36.000"	"29.000"	"0.0245728213483345"	"15"	"0.0009352"	"0.008116"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.29907"	"1756.88266"	"1756.88277"	"-0.06"	"-0.00004"	"12/96"	"12"	"96"	"3296244.13824463"	"HCD"	"MS2"	"8.405714"	"89.3"	"100.000"	"42.0326"	"12083"	"12083"	"12060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.2"	""	"92.1"	""	"100.2"	""	"184.9"	""	"173.8"	"164.5"	""	"813"	"26"	"36.000"	"29.000"	"0.102815963555536"	"14"	"0"	"0.0003199"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDSTEPPYSQK"	"[K].mDSTEPPYSQk.[R]"	"N-Term(TMT6plex); M1(Oxidation); K11(TMT6plex)"	"1"	"1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"P62630"	"Elongation factor 1-alpha 1 OS=Rattus norvegicus OX=10116 GN=Eef1a1 PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"586.29950"	"1756.88395"	"1756.88277"	"0.67"	"0.00039"	"10/96"	"10"	"96"	"3508818.75689697"	"HCD"	"MS2"	"7.783165"	"93.9"	"100.000"	"41.9173"	"12070"	"12070"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.3"	""	"99.3"	""	"121.8"	""	"179.1"	""	"187.2"	"157.0"	""	"840"	"30"	"36.000"	"29.000"	"0.0379532778963366"	"20"	"0"	"0.0002729"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLSPQGDPWDSVAR"	"[K].vLSPqGDPWDSVAR.[I]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"Q63495"	"Advanced glycosylation end product-specific receptor OS=Rattus norvegicus OX=10116 GN=Ager PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"878.95630"	"1756.90532"	"1756.90673"	"-0.80"	"-0.00070"	"5/138"	"5"	"138"	"86174.7854003906"	"HCD"	"MS2"	"34.48419"	"2.7"	"100.000"	"105.9783"	"37987"	"37987"	"37967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.0"	""	"5.3"	""	"1.6"	""	"6.4"	""	"3.8"	"4.9"	""	"953"	"10"	"36.000"	"29.000"	"5.10578948945719"	"16"	"0.005832"	"0.07217"	"0.06"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.9189"	"0.0000"	"1"	"1"	"1"	"878.98334"	"1756.95940"	"1756.96341"	"-2.28"	"-0.00200"	"11/114"	"11"	"114"	"161674.163879395"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"79.4581"	"27274"	"27274"	"27243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"9.8"	""	"7.8"	""	"23.5"	""	"20.2"	"18.0"	""	"1029"	"37"	"37.000"	"30.000"	"0.00987155067074863"	"18"	"9.9E-05"	"0.0007869"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"878.98431"	"1756.96135"	"1756.96341"	"-1.17"	"-0.00103"	"11/114"	"11"	"114"	"244637.05859375"	"HCD"	"MS2"	"15.73906"	"22.7"	"100.000"	"80.0943"	"27533"	"27533"	"27509"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"30.0"	""	"24.2"	""	"43.8"	"2.0"	"52.0"	"33.2"	""	"1050"	"32"	"37.000"	"30.000"	"0.0364048548158699"	"19"	"0.0001686"	"0.001769"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8200"	"0.0000"	"1"	"1"	"1"	"878.98486"	"1756.96245"	"1756.96341"	"-0.54"	"-0.00048"	"9/114"	"9"	"114"	"758681.038818359"	"HCD"	"MS2"	"0"	"59.5"	"100.000"	"79.9374"	"27496"	"27496"	"27477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"87.2"	""	"68.5"	""	"45.6"	""	"133.7"	""	"136.5"	"96.4"	""	"1052"	"50"	"37.000"	"30.000"	"0.000508142762348642"	"25"	"0"	"1.925E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"586.32599"	"1756.96341"	"1756.96341"	"0.00"	"0.00000"	"12/114"	"12"	"114"	"4219757.88323975"	"HCD"	"MS2"	"16.48537"	"97.6"	"100.000"	"79.7005"	"27372"	"27372"	"27353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.1"	""	"118.7"	""	"99.4"	""	"198.1"	"2.3"	"211.4"	"167.7"	""	"1038"	"34"	"37.000"	"30.000"	"0.023182878432635"	"22"	"0"	"3.299E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"586.32605"	"1756.96360"	"1756.96341"	"0.11"	"0.00006"	"12/114"	"12"	"114"	"3488182.13702393"	"HCD"	"MS2"	"12.59779"	"85.2"	"100.000"	"79.7807"	"27432"	"27432"	"27413"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"107.7"	""	"103.0"	""	"94.9"	""	"164.8"	""	"190.9"	"153.2"	""	"1038"	"34"	"37.000"	"30.000"	"0.0211430364180334"	"22"	"0"	"4.716E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"878.98553"	"1756.96379"	"1756.96341"	"0.22"	"0.00019"	"7/114"	"7"	"114"	"696777.585632324"	"HCD"	"MS2"	"0"	"51.3"	"100.000"	"79.7769"	"27403"	"27403"	"27383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"70.6"	""	"57.2"	""	"40.3"	""	"123.5"	""	"110.1"	"87.9"	""	"1038"	"46"	"37.000"	"30.000"	"0.00129171694818856"	"22"	"0"	"3.341E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"586.32635"	"1756.96451"	"1756.96341"	"0.63"	"0.00037"	"11/114"	"11"	"114"	"1981364.34942627"	"HCD"	"MS2"	"36.04857"	"57.4"	"100.000"	"80.1975"	"27602"	"27602"	"27584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.1"	""	"72.5"	""	"69.6"	""	"100.0"	"0.6"	"113.2"	"108.0"	""	"1028"	"19"	"37.000"	"30.000"	"0.648579352779605"	"16"	"0"	"0.0003056"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"878.98590"	"1756.96453"	"1756.96341"	"0.64"	"0.00056"	"10/114"	"10"	"114"	"208700.598632813"	"HCD"	"MS2"	"30.44846"	"20.9"	"100.000"	"80.2389"	"27619"	"27619"	"27600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"29.6"	""	"20.5"	""	"39.9"	""	"40.7"	"32.2"	""	"1029"	"34"	"37.000"	"30.000"	"0.0191154875370495"	"18"	"9.9E-05"	"0.0009745"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SQLQEGPPEWK"	"[K].sQLQEGPPEWk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"P06399"	"Fibrinogen alpha chain OS=Rattus norvegicus OX=10116 GN=Fga PE=1 SV=3"	"0"	"2"	"2"	"0.8158"	"0.0000"	"1"	"1"	"1"	"878.98627"	"1756.96526"	"1756.96341"	"1.05"	"0.00093"	"11/114"	"11"	"114"	"172322.661132813"	"HCD"	"MS2"	"0"	"12.9"	"100.000"	"79.6077"	"27362"	"27362"	"27334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"16.2"	""	"14.1"	""	"28.8"	""	"22.8"	"22.5"	""	"1028"	"38"	"37.000"	"30.000"	"0.00868886638864638"	"22"	"0"	"0.000327"	"0.548"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPNLVPSVSNK"	"[K].eDPNLVPSVSNk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"878.99573"	"1756.98418"	"1756.98453"	"-0.20"	"-0.00018"	"6/122"	"6"	"122"	"97429.8552856445"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"76.4562"	"26059"	"26059"	"26032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"6.6"	""	"7.1"	""	"11.9"	""	"14.7"	"12.4"	""	"974"	"19"	"36.000"	"29.000"	"0.588205337697003"	"15"	"0.004852"	"0.05983"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDPNLVPSVSNK"	"[K].eDPNLVPSVSNk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"P12075"	"Cytochrome c oxidase subunit 5B, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cox5b PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"878.99573"	"1756.98418"	"1756.98453"	"-0.20"	"-0.00018"	"7/122"	"7"	"122"	"102965.213134766"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"76.4825"	"26101"	"26101"	"26074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.5"	""	"8.7"	""	"8.0"	""	"13.8"	""	"14.4"	"12.0"	""	"974"	"11"	"36.000"	"29.000"	"3.60187768953362"	"13"	"0.003401"	"0.03829"	"0.12"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.93951"	"1758.87175"	"1758.87476"	"-1.71"	"-0.00150"	"7/110"	"7"	"110"	"182260.011901855"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"85.6627"	"29783"	"29783"	"29762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"24.1"	""	"14.0"	""	"20.2"	""	"18.9"	"16.7"	""	"733"	"19"	"35.000"	"28.000"	"0.423715136763404"	"14"	"0.0001686"	"0.00154"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"879.94012"	"1758.87297"	"1758.87476"	"-1.02"	"-0.00089"	"5/110"	"5"	"110"	"140442.173583984"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"85.6299"	"29798"	"29798"	"29780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"13.7"	""	"12.9"	""	"14.0"	""	"17.0"	"14.6"	""	"759"	"19"	"35.000"	"28.000"	"0.516668256995828"	"14"	"0.001872"	"0.01539"	"0.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.96259"	"1758.87320"	"1758.87476"	"-0.89"	"-0.00052"	"12/110"	"12"	"110"	"1723759.62670898"	"HCD"	"MS2"	"5.855403"	"25.3"	"100.000"	"85.7713"	"29826"	"29826"	"29808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.3"	""	"36.5"	""	"31.9"	""	"48.2"	"2.2"	"36.6"	"41.8"	""	"756"	"30"	"35.000"	"28.000"	"0.0421203333697674"	"14"	"0"	"6.307E-05"	"0.695"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.94080"	"1758.87432"	"1758.87476"	"-0.25"	"-0.00022"	"6/110"	"6"	"110"	"196925.202392578"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"86.2156"	"30035"	"30035"	"30020"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"20.0"	""	"15.1"	""	"20.3"	""	"18.9"	"21.2"	""	"764"	"36"	"35.000"	"28.000"	"0.0101405932467466"	"15"	"0"	"0.0001034"	"0.651"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"879.94104"	"1758.87480"	"1758.87476"	"0.02"	"0.00002"	"7/110"	"7"	"110"	"161974.223693848"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"86.2648"	"30023"	"30023"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.0"	""	"16.5"	""	"8.4"	""	"20.4"	""	"14.5"	"17.0"	""	"761"	"40"	"35.000"	"28.000"	"0.00395689623097957"	"15"	"9.9E-05"	"0.0004207"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9310"	"0.0000"	"1"	"1"	"1"	"879.94110"	"1758.87493"	"1758.87476"	"0.09"	"0.00008"	"12/110"	"12"	"110"	"970600.432128906"	"HCD"	"MS2"	"0"	"50.7"	"100.000"	"85.9651"	"29904"	"29904"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"122.5"	""	"81.9"	""	"51.3"	""	"82.4"	"0.9"	"72.0"	"67.1"	""	"760"	"58"	"35.000"	"28.000"	"6.68010973304303E-05"	"21"	"0"	"1.224E-07"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.9298"	"0.0000"	"1"	"1"	"1"	"879.94110"	"1758.87493"	"1758.87476"	"0.09"	"0.00008"	"12/110"	"12"	"110"	"1101032.75384521"	"HCD"	"MS2"	"0"	"57.9"	"100.000"	"85.9342"	"29921"	"29921"	"29903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.4"	""	"89.9"	""	"61.0"	""	"87.7"	""	"87.3"	"84.4"	""	"760"	"57"	"35.000"	"28.000"	"7.72295664155764E-05"	"20"	"0"	"1.221E-07"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"586.96320"	"1758.87503"	"1758.87476"	"0.16"	"0.00009"	"14/110"	"14"	"110"	"2046711.91265869"	"HCD"	"MS2"	"2.778982"	"23.4"	"100.000"	"86.0755"	"29948"	"29948"	"29937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.6"	""	"31.4"	""	"24.2"	""	"42.8"	""	"39.9"	"44.1"	""	"762"	"32"	"35.000"	"28.000"	"0.0243738972318889"	"14"	"0"	"6.167E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"586.96332"	"1758.87540"	"1758.87476"	"0.36"	"0.00021"	"15/110"	"15"	"110"	"1602854.33636475"	"HCD"	"MS2"	"25.95324"	"21.8"	"100.000"	"85.7294"	"29838"	"29838"	"29818"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.8"	""	"30.1"	"1.8"	"23.8"	""	"33.8"	"1.1"	"38.6"	"35.6"	""	"763"	"35"	"35.000"	"28.000"	"0.0121757169172094"	"15"	"0"	"2.365E-05"	"0.783"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEELTYSVPYGR"	"[R].dTEELTYSVPYGR.[E]"	"N-Term(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"586.96350"	"1758.87595"	"1758.87476"	"0.68"	"0.00040"	"15/110"	"15"	"110"	"2397787.5894165"	"HCD"	"MS2"	"8.978783"	"22.1"	"100.000"	"86.0519"	"29969"	"29969"	"29951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.7"	""	"25.6"	""	"28.3"	""	"36.6"	"0.9"	"46.5"	"33.5"	""	"767"	"52"	"35.000"	"28.000"	"0.00023483637522645"	"18"	"0"	"2.948E-06"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDELPATGGDGGK"	"[R].sPDELPATGGDGGk.[H]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"F1M775"	"Protein diaphanous homolog 1 OS=Rattus norvegicus OX=10116 GN=Diaph1 PE=1 SV=3"	"0"	"2"	"2"	"0.5263"	"0.0000"	"1"	"1"	"1"	"879.96680"	"1758.92632"	"1758.92741"	"-0.62"	"-0.00055"	"4/124"	"4"	"124"	"87928.3539428711"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"52.5720"	"16397"	"16397"	"16372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.4"	""	"7.7"	""	"8.2"	""	"9.3"	""	"9.1"	"8.5"	""	"1001"	"19"	"36.000"	"30.000"	"0.628642996829284"	"23"	"0.002035"	"0.01824"	"0.187"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7429"	"0.0000"	"1"	"1"	"1"	"880.00146"	"1758.99565"	"1759.00019"	"-2.58"	"-0.00227"	"7/118"	"7"	"118"	"118024.159912109"	"HCD"	"MS2"	"0"	"10.3"	"100.000"	"77.4956"	"26476"	"26476"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.8"	""	"10.8"	""	"18.9"	""	"15.1"	""	"14.7"	"24.4"	""	"973"	"35"	"36.000"	"29.000"	"0.0140955765541669"	"24"	"9.9E-05"	"0.0005778"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.6190"	"0.0000"	"1"	"1"	"1"	"880.00195"	"1758.99663"	"1759.00019"	"-2.02"	"-0.00178"	"10/118"	"10"	"118"	"196595.831665039"	"HCD"	"MS2"	"100"	"20.1"	"100.000"	"76.8930"	"26236"	"26236"	"26228"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.7"	""	"27.2"	""	"30.4"	""	"34.1"	""	"27.5"	"41.8"	""	"988"	"21"	"36.000"	"29.000"	"0.394209375510381"	"22"	"0.0001686"	"0.001377"	"0.419"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"587.00385"	"1758.99698"	"1759.00019"	"-1.82"	"-0.00107"	"11/118"	"11"	"118"	"642732.157958984"	"HCD"	"MS2"	"45.86308"	"22.4"	"100.000"	"77.4797"	"26469"	"26469"	"26449"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"26.7"	""	"36.8"	""	"33.4"	"0.7"	"36.6"	"45.9"	""	"988"	"45"	"36.000"	"29.000"	"0.00157661970041978"	""	"0"	"1.969E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7753"	"0.0000"	"1"	"1"	"1"	"880.00220"	"1758.99712"	"1759.00019"	"-1.74"	"-0.00153"	"11/118"	"11"	"118"	"414814.298339844"	"HCD"	"MS2"	"0"	"35.1"	"100.000"	"77.1817"	"26350"	"26350"	"26336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.1"	""	"37.8"	""	"53.2"	""	"54.7"	"0.1"	"51.4"	"72.0"	""	"988"	"89"	"36.000"	"29.000"	"6.21909153426318E-08"	""	"0"	"7.552E-08"	"1.296"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7222"	"0.0000"	"1"	"1"	"1"	"880.00305"	"1758.99883"	"1759.00019"	"-0.77"	"-0.00068"	"10/118"	"10"	"118"	"211059.443847656"	"HCD"	"MS2"	"0"	"18.1"	"100.000"	"76.9908"	"26307"	"26307"	"26288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"20.5"	""	"26.7"	""	"33.3"	""	"35.5"	"31.1"	""	"970"	"72"	"36.000"	"29.000"	"3.42564013817536E-06"	""	"0"	"5.846E-07"	"1.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"587.00452"	"1758.99900"	"1759.00019"	"-0.68"	"-0.00040"	"12/118"	"12"	"118"	"850528.567321777"	"HCD"	"MS2"	"0"	"28.7"	"100.000"	"77.4457"	"26484"	"26484"	"26474"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.8"	""	"35.5"	""	"47.5"	""	"43.4"	"2.7"	"46.6"	"57.5"	""	"970"	"47"	"36.000"	"29.000"	"0.000981164301658962"	"28"	"0"	"4.081E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7200"	"0.0000"	"1"	"1"	"1"	"880.00336"	"1758.99944"	"1759.00019"	"-0.43"	"-0.00037"	"10/118"	"10"	"118"	"374005.940124512"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"77.2555"	"26409"	"26409"	"26400"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.7"	""	"39.9"	""	"53.8"	""	"48.1"	"0.3"	"51.4"	"75.5"	""	"968"	"75"	"36.000"	"29.000"	"1.5734225193455E-06"	""	"0"	"1.637E-07"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQANGELEVk.[I]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.7188"	"0.0000"	"1"	"1"	"1"	"880.00372"	"1759.00017"	"1759.00019"	"-0.01"	"-0.00001"	"9/118"	"9"	"118"	"107422.731079102"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"77.5901"	"26542"	"26542"	"26519"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"10.3"	""	"13.2"	""	"13.2"	""	"16.5"	"16.4"	""	"950"	"32"	"36.000"	"29.000"	"0.0335500838274907"	"24"	"0.0001991"	"0.002302"	"0.373"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEDFQPYFK"	"[R].eVEDFQPYFk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"2"	"2"	"0.7037"	"0.0000"	"1"	"1"	"1"	"880.46796"	"1759.92864"	"1759.93071"	"-1.18"	"-0.00104"	"5/86"	"5"	"86"	"136997.226379395"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"107.5598"	"38609"	"38609"	"38591"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"11.9"	""	"15.1"	""	"16.9"	""	"26.1"	"26.3"	""	"1036"	"27"	"37.000"	"30.000"	"0.101001950267467"	"22"	"0.004713"	"0.05564"	"0.085"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEDFQPYFK"	"[R].eVEDFQPYFk.[G]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"Q6AXX6"	"Peroxiredoxin-like 2A OS=Rattus norvegicus OX=10116 GN=Prxl2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.31567"	"1759.93247"	"1759.93071"	"1.00"	"0.00059"	"7/86"	"7"	"86"	"301677.865539551"	"HCD"	"MS2"	"11.0033"	"11.5"	"100.000"	"107.2739"	"38479"	"38479"	"38460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"15.5"	""	"15.8"	""	"16.9"	"1.3"	"21.0"	"22.0"	""	"1089"	"9"	"37.000"	"30.000"	"7.04689635669518"	"13"	"0.002525"	"0.02461"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPGTTPVQTQEVR"	"[R].fAPGTTPVQTQEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"0.9118"	"0.0000"	"1"	"1"	"1"	"880.47974"	"1759.95220"	"1759.95401"	"-1.03"	"-0.00091"	"6/128"	"6"	"128"	"280131.564147949"	"HCD"	"MS2"	"0"	"13.9"	"100.000"	"64.6020"	"21281"	"21281"	"21259"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.7"	""	"14.5"	""	"14.4"	""	"22.5"	""	"27.3"	"31.2"	""	"1168"	"34"	"37.000"	"30.000"	"0.0217476756452668"	"17"	"0.0001991"	"0.003402"	"0.338"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPGTTPVQTQEVR"	"[R].fAPGTTPVQTQEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.48029"	"1759.95329"	"1759.95401"	"-0.41"	"-0.00036"	"9/128"	"9"	"128"	"342716.908752441"	"HCD"	"MS2"	"0"	"16.3"	"100.000"	"64.5365"	"21220"	"21220"	"21203"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"20.1"	""	"22.4"	""	"21.3"	""	"32.6"	"32.0"	""	"1149"	"14"	"37.000"	"30.000"	"2.05726403115464"	"13"	"0.002189"	"0.02033"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPGTTPVQTQEVR"	"[R].fAPGTTPVQTQEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.48071"	"1759.95415"	"1759.95401"	"0.08"	"0.00007"	"6/128"	"6"	"128"	"107151.886657715"	"HCD"	"MS2"	"100"	"5.1"	"100.000"	"64.2289"	"21096"	"21096"	"21077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"5.4"	""	"5.1"	""	"9.4"	""	"11.9"	"10.0"	""	"1147"	"5"	"37.000"	"30.000"	"17.2795895487074"	"13"	"0.001615"	"0.01328"	"0.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAPGTTPVQTQEVR"	"[R].fAPGTTPVQTQEVR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"Q4KM35"	"Proteasome subunit beta type-10 OS=Rattus norvegicus OX=10116 GN=Psmb10 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"880.48218"	"1759.95708"	"1759.95401"	"1.74"	"0.00153"	"7/128"	"7"	"128"	"242626.227966309"	"HCD"	"MS2"	"0"	"11.1"	"100.000"	"64.3056"	"21160"	"21160"	"21137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"14.4"	""	"10.4"	""	"17.4"	""	"20.3"	"22.6"	""	"1131"	"38"	"37.000"	"30.000"	"0.0080063138256573"	"15"	"9.9E-05"	"0.0009585"	"0.452"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.3390"	"0.0000"	"1"	"1"	"1"	"587.33203"	"1759.98154"	"1759.98420"	"-1.51"	"-0.00089"	"13/118"	"13"	"118"	"788214.68963623"	"HCD"	"MS2"	"18.20159"	"28.9"	"100.000"	"81.1749"	"27998"	"27998"	"27976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.3"	""	"34.9"	""	"33.8"	""	"48.4"	"0.1"	"48.0"	"58.3"	""	"1079"	"59"	"37.000"	"30.000"	"6.56132347348715E-05"	"29"	"0"	"3.918E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.0870"	"0.0000"	"1"	"1"	"1"	"587.33258"	"1759.98319"	"1759.98420"	"-0.58"	"-0.00034"	"13/118"	"13"	"118"	"553395.495788574"	"HCD"	"MS2"	"21.98277"	"28.2"	"100.000"	"81.0505"	"27921"	"27921"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"36.3"	""	"40.1"	""	"42.7"	"0.4"	"48.7"	"59.1"	""	"1068"	"23"	"37.000"	"30.000"	"0.241847307668533"	"16"	"0"	"0.0001327"	"0.629"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"0.0217"	"0.0000"	"1"	"1"	"1"	"587.33258"	"1759.98319"	"1759.98420"	"-0.58"	"-0.00034"	"8/118"	"8"	"118"	"719236.963745117"	"HCD"	"MS2"	"15.36069"	"28.2"	"100.000"	"81.0390"	"27916"	"27916"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"36.3"	""	"40.1"	""	"42.7"	"0.4"	"48.7"	"59.1"	""	"1068"	"46"	"37.000"	"30.000"	"0.00141429907401598"	"25"	"0"	"0.0002276"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEqANGELEVk.[I]"	"N-Term(TMT6plex); Q4(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	""	"0.0217"	"2"	"2"	"2"	"587.33258"	"1759.98319"	"1759.98420"	"-0.58"	"-0.00034"	"8/118"	"8"	"118"	"719236.963745117"	"HCD"	"MS2"	"15.36069"	"28.2"	"100.000"	"81.0390"	"27916"	"27916"	"27901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.5"	""	"36.3"	""	"40.1"	""	"42.7"	"0.4"	"48.7"	"59.1"	""	"1068"	"45"	"37.000"	"30.000"	"0.00152595335016222"	"25"	"9.9E-05"	"0.0004489"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"880.49530"	"1759.98332"	"1759.98420"	"-0.50"	"-0.00044"	"5/118"	"5"	"118"	"77661.3895874023"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"84.5028"	"29315"	"29315"	"29291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.6"	""	"7.1"	""	"7.0"	""	"7.8"	""	"10.3"	"12.7"	""	"1066"	"18"	"37.000"	"30.000"	"0.92838306351773"	"16"	"0.001217"	"0.009363"	"0.248"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"880.49554"	"1759.98381"	"1759.98420"	"-0.22"	"-0.00019"	"7/118"	"7"	"118"	"76361.1156616211"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"81.3064"	"28025"	"28025"	"27998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.7"	"1.7"	"5.0"	""	"7.7"	""	"2.9"	""	"7.7"	"15.5"	""	"1071"	"10"	"37.000"	"30.000"	"5.26937947135087"	"13"	"0.006958"	"0.08788"	"0.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.3077"	"0.0000"	"1"	"1"	"1"	"880.49579"	"1759.98430"	"1759.98420"	"0.06"	"0.00005"	"9/118"	"9"	"118"	"145650.572692871"	"HCD"	"MS2"	"49.59343"	"13.2"	"100.000"	"80.9972"	"27927"	"27927"	"27900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"17.8"	""	"19.0"	""	"18.3"	""	"21.7"	"27.6"	""	"1044"	"26"	"37.000"	"30.000"	"0.137616498340085"	"14"	"0.0001686"	"0.001818"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5556"	"0.0000"	"1"	"1"	"1"	"880.49646"	"1759.98564"	"1759.98420"	"0.82"	"0.00072"	"9/118"	"9"	"118"	"142151.747314453"	"HCD"	"MS2"	"42.15633"	"12.8"	"100.000"	"80.9305"	"27873"	"27873"	"27843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"11.9"	""	"18.4"	""	"21.6"	""	"18.4"	"26.3"	""	"1056"	"27"	"37.000"	"30.000"	"0.106815412634213"	"17"	"9.9E-05"	"0.0007629"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALEQANGELEVK"	"[R].aLEQAnGELEVk.[I]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"880.49652"	"1759.98577"	"1759.98420"	"0.89"	"0.00078"	"5/118"	"5"	"118"	"78409.1876220703"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"81.3409"	"28066"	"28066"	"28039"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.0"	""	"7.6"	""	"9.6"	""	"9.7"	""	"10.0"	"14.7"	""	"1056"	"18"	"37.000"	"30.000"	"0.864239123313883"	"14"	"0.001348"	"0.01139"	"0.23"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPHNAAVQVYDYR"	"[R].vPHNAAVQVYDYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.64612"	"1760.92380"	"1760.92813"	"-2.46"	"-0.00144"	"10/114"	"10"	"114"	"3471971.65576172"	"HCD"	"MS2"	"68.63319"	"106.6"	"100.000"	"57.5829"	"18396"	"18396"	"18375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.4"	""	"171.7"	""	"152.8"	""	"124.2"	"1.4"	"206.2"	"192.6"	""	"1079"	"26"	"37.000"	"30.000"	"0.136141787675327"	"14"	"0"	"2.163E-05"	"0.791"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPHNAAVQVYDYR"	"[R].vPHNAAVQVYDYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"587.64673"	"1760.92563"	"1760.92813"	"-1.42"	"-0.00083"	"9/114"	"9"	"114"	"1620655.04162598"	"HCD"	"MS2"	"15.77397"	"26.9"	"100.000"	"57.6793"	"18471"	"18471"	"18450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.4"	""	"31.1"	""	"37.7"	""	"39.5"	"0.6"	"60.1"	"53.5"	""	"1100"	"48"	"37.000"	"30.000"	"0.00094921084059461"	"17"	"0"	"2.242E-06"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPHNAAVQVYDYR"	"[R].vPHNAAVQVYDYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"587.64691"	"1760.92618"	"1760.92813"	"-1.11"	"-0.00065"	"15/114"	"15"	"114"	"3745974.91412354"	"HCD"	"MS2"	"59.72256"	"102.3"	"100.000"	"57.3341"	"18330"	"18330"	"18309"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.8"	""	"151.7"	""	"123.3"	""	"125.3"	"2.9"	"196.6"	"207.8"	""	"1098"	"21"	"37.000"	"30.000"	"0.451411214820942"	"14"	"0"	"1.346E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPHNAAVQVYDYR"	"[R].vPHNAAVQVYDYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"Q62667"	"Major vault protein OS=Rattus norvegicus OX=10116 GN=Mvp PE=1 SV=4"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"587.64709"	"1760.92673"	"1760.92813"	"-0.80"	"-0.00047"	"10/114"	"10"	"114"	"2174795.10015869"	"HCD"	"MS2"	"13.96762"	"42.6"	"100.000"	"57.8887"	"18521"	"18521"	"18502"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.7"	""	"54.7"	""	"57.7"	""	"68.7"	""	"84.6"	"81.0"	""	"1091"	"35"	"37.000"	"30.000"	"0.0183144868569532"	"20"	"0"	"6.605E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVSLTGAPESVQK"	"[R].sVSLTGAPESVQk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"Q99PF5"	"Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1"	"0"	"3"	"3"	"0.7188"	"0.0000"	"1"	"1"	"1"	"587.67560"	"1761.01224"	"1761.01584"	"-2.04"	"-0.00120"	"13/116"	"13"	"116"	"619001.727478027"	"HCD"	"MS2"	"15.15628"	"25.6"	"100.000"	"72.6669"	"24519"	"24519"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.5"	""	"24.8"	""	"29.1"	""	"50.7"	"0.4"	"49.4"	"48.6"	""	"1078"	"32"	"37.000"	"30.000"	"0.0362734417737247"	"23"	"0"	"4.064E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWEEGVAQMSVGQR"	"[R].gWEEGVAQMSVGQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"588.29553"	"1762.87204"	"1762.87438"	"-1.33"	"-0.00078"	"6/130"	"6"	"130"	"645001.653076172"	"HCD"	"MS2"	"33.50193"	"21.0"	"100.000"	"89.8568"	"31461"	"31461"	"31446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.1"	""	"23.5"	""	"24.6"	""	"32.8"	""	"42.4"	"53.2"	""	"780"	"25"	"35.000"	"28.000"	"0.131542050376959"	"19"	"0"	"0.0003217"	"0.549"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GWEEGVAQMSVGQR"	"[R].gWEEGVAQMSVGQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"Q62658"	"Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus OX=10116 GN=Fkbp1a PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"588.29706"	"1762.87662"	"1762.87438"	"1.27"	"0.00075"	"14/130"	"14"	"130"	"668094.569396973"	"HCD"	"MS2"	"42.64069"	"19.0"	"100.000"	"89.7702"	"31467"	"31467"	"31446"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.2"	""	"17.2"	""	"22.0"	""	"34.1"	""	"35.1"	"47.8"	""	"816"	"34"	"36.000"	"29.000"	"0.0176059783345728"	"15"	"0"	"1.338E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"881.96674"	"1762.92620"	"1762.92972"	"-2.00"	"-0.00176"	"9/114"	"9"	"114"	"171092.98425293"	"HCD"	"MS2"	"0"	"17.5"	"100.000"	"78.3197"	"26810"	"26810"	"26790"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.6"	""	"16.2"	""	"21.0"	""	"19.5"	"0.8"	"39.0"	"37.9"	""	"1040"	"38"	"37.000"	"30.000"	"0.00748175260693039"	"23"	"0.004819"	"0.05827"	"0.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.7436"	"0.0000"	"1"	"1"	"1"	"881.96790"	"1762.92851"	"1762.92972"	"-0.69"	"-0.00060"	"13/114"	"13"	"114"	"391928.604492188"	"HCD"	"MS2"	"0"	"39.9"	"100.000"	"78.6216"	"26933"	"26933"	"26913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.9"	""	"31.3"	""	"43.6"	""	"46.3"	""	"101.0"	"87.2"	""	"1065"	"39"	"37.000"	"30.000"	"0.006256329480053"	"25"	"0.0001686"	"0.001495"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.5952"	"0.0000"	"1"	"1"	"1"	"588.31445"	"1762.92881"	"1762.92972"	"-0.52"	"-0.00031"	"9/114"	"9"	"114"	"1208789.87445068"	"HCD"	"MS2"	"35.56488"	"45.9"	"100.000"	"78.4369"	"26858"	"26858"	"26836"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"71.7"	""	"46.1"	""	"53.1"	""	"67.3"	""	"100.8"	"100.3"	""	"1063"	"42"	"37.000"	"30.000"	"0.00352779441918614"	""	"0.002189"	"0.02104"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"881.96820"	"1762.92912"	"1762.92972"	"-0.34"	"-0.00030"	"11/114"	"11"	"114"	"219938.458251953"	"HCD"	"MS2"	"0"	"23.2"	"100.000"	"78.4691"	"26898"	"26898"	"26871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.6"	""	"16.3"	""	"28.3"	""	"26.7"	""	"62.0"	"49.5"	""	"1061"	"34"	"37.000"	"30.000"	"0.0226822111103417"	"25"	"0.006697"	"0.08317"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"588.31458"	"1762.92917"	"1762.92972"	"-0.31"	"-0.00018"	"8/114"	"8"	"114"	"899602.852539063"	"HCD"	"MS2"	"18.20296"	"38.7"	"100.000"	"78.8770"	"27064"	"27064"	"27046"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"35.4"	""	"38.7"	""	"69.7"	"0.5"	"76.7"	"91.9"	""	"1067"	"27"	"37.000"	"30.000"	"0.109934605872955"	"29"	"0.004959"	"0.06117"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.4444"	"0.0000"	"1"	"1"	"1"	"588.31458"	"1762.92917"	"1762.92972"	"-0.31"	"-0.00018"	"8/114"	"8"	"114"	"957399.432495117"	"HCD"	"MS2"	"15.24204"	"40.6"	"100.000"	"78.7414"	"26982"	"26982"	"26961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.4"	""	"41.2"	""	"46.5"	""	"64.6"	"0.6"	"85.7"	"96.3"	""	"1067"	"27"	"37.000"	"30.000"	"0.106692630744907"	"29"	"0.003208"	"0.03473"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDKPDMAEIEK"	"[M].sDkPDMAEIEk.[F]"	"N-Term(Prot)(Acetyl); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"P62329"	"Thymosin beta-4 OS=Rattus norvegicus OX=10116 GN=Tmsb4x PE=1 SV=2"	"0"	"3"	"3"	"0.4516"	"0.0000"	"1"	"1"	"1"	"588.31470"	"1762.92954"	"1762.92972"	"-0.10"	"-0.00006"	"8/114"	"8"	"114"	"1694522.41259766"	"HCD"	"MS2"	"30.51935"	"61.7"	"100.000"	"78.5727"	"26940"	"26940"	"26919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.2"	""	"69.6"	""	"69.7"	""	"100.5"	""	"103.6"	"144.3"	""	"1069"	"31"	"37.000"	"30.000"	"0.0392597662529978"	""	"0"	"0.0003567"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAIANSGLDHTHR"	"[K].lEAIANSGLDHTHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"0"	"4"	"4"	"0.9032"	"0.0000"	"1"	"1"	"1"	"441.49008"	"1762.93850"	"1762.93976"	"-0.72"	"-0.00032"	"12/140"	"12"	"140"	"1691758.10339355"	"HCD"	"MS2"	"50.89417"	"50.1"	"100.000"	"52.6549"	"16397"	"16397"	"16371"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.0"	""	"65.9"	""	"63.8"	""	"93.3"	""	"95.0"	"100.9"	""	"1081"	"31"	"37.000"	"30.000"	"0.0423443721915138"	"18"	"0"	"0.0003857"	"0.533"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEAIANSGLDHTHR"	"[K].lEAIANSGLDHTHR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"Q8VII6"	"Choline transporter-like protein 1 OS=Rattus norvegicus OX=10116 GN=Slc44a1 PE=1 SV=1"	"0"	"4"	"4"	"0.8438"	"0.0000"	"1"	"1"	"1"	"441.49020"	"1762.93899"	"1762.93976"	"-0.44"	"-0.00019"	"13/140"	"13"	"140"	"1655229.08270264"	"HCD"	"MS2"	"46.34684"	"51.2"	"100.000"	"52.3005"	"16286"	"16286"	"16262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.7"	"2.3"	"64.1"	""	"65.3"	""	"99.3"	""	"107.6"	"94.9"	""	"1086"	"32"	"37.000"	"30.000"	"0.0327189855238376"	"19"	"0"	"0.0002305"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMMmAAR.[Q]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.44348"	"1763.87969"	"1763.88040"	"-0.40"	"-0.00036"	"5/120"	"5"	"120"	"81374.9473266602"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"73.4510"	"24839"	"24839"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"11.0"	""	"6.7"	""	"4.4"	""	"9.4"	"6.3"	""	"821"	"12"	"36.000"	"29.000"	"2.47920912359004"	"13"	"0.002525"	"0.02488"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMmMAAR.[Q]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"882.44348"	"1763.87969"	"1763.88040"	"-0.40"	"-0.00036"	"5/120"	"5"	"120"	"81374.9473266602"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"73.4510"	"24839"	"24839"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"11.0"	""	"6.7"	""	"4.4"	""	"9.4"	"6.3"	""	"821"	"12"	"36.000"	"29.000"	"2.47920912359004"	"13"	"0.002525"	"0.02488"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmMMAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"3"	"3"	"882.44348"	"1763.87969"	"1763.88040"	"-0.40"	"-0.00036"	"5/120"	"5"	"120"	"81374.9473266602"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"73.4510"	"24839"	"24839"	"24810"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"11.0"	""	"6.7"	""	"4.4"	""	"9.4"	"6.3"	""	"821"	"12"	"36.000"	"29.000"	"2.47920912359004"	"13"	"0.002525"	"0.02488"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMMmAAR.[Q]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.0588"	"0.0000"	"1"	"1"	"1"	"882.44397"	"1763.88066"	"1763.88040"	"0.15"	"0.00013"	"6/120"	"6"	"120"	"126922.452148438"	"HCD"	"MS2"	"0"	"7.9"	"100.000"	"69.6001"	"23310"	"23310"	"23283"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"9.7"	""	"16.2"	""	"10.8"	""	"12.5"	"10.4"	""	"827"	"17"	"36.000"	"29.000"	"0.738712612201322"	"14"	"0.002189"	"0.02047"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMMmAAR.[Q]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"882.44440"	"1763.88152"	"1763.88040"	"0.63"	"0.00056"	"6/120"	"6"	"120"	"177661.42388916"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"69.5685"	"23263"	"23263"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"15.0"	""	"13.1"	""	"17.4"	""	"16.5"	"10.3"	""	"834"	"17"	"36.000"	"29.000"	"0.76937142979784"	"15"	"0.0005778"	"0.007087"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMmMAAR.[Q]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"2"	"2"	"882.44440"	"1763.88152"	"1763.88040"	"0.63"	"0.00056"	"6/120"	"6"	"120"	"177661.42388916"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"69.5685"	"23263"	"23263"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"15.0"	""	"13.1"	""	"17.4"	""	"16.5"	"10.3"	""	"834"	"17"	"36.000"	"29.000"	"0.76937142979784"	"15"	"0.0005778"	"0.007087"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmMMAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.8824"	"0.0000"	"1"	"3"	"3"	"882.44440"	"1763.88152"	"1763.88040"	"0.63"	"0.00056"	"6/120"	"6"	"120"	"177661.42388916"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"69.5685"	"23263"	"23263"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"15.0"	""	"13.1"	""	"17.4"	""	"16.5"	"10.3"	""	"834"	"17"	"36.000"	"29.000"	"0.76937142979784"	"15"	"0.0005778"	"0.007087"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMNPEYDYLFK"	"[M].sSMNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9143"	"0.0000"	"1"	"1"	"1"	"882.92126"	"1764.83525"	"1764.83520"	"0.03"	"0.00002"	"6/118"	"6"	"118"	"104189.117431641"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"113.7551"	"41026"	"41026"	"41001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.7"	""	"9.5"	""	"6.6"	""	"9.4"	""	"12.1"	"12.8"	""	"559"	"35"	"34.000"	"27.000"	"0.00853850451143737"	"17"	"0.00212"	"0.01944"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EAAGVLSGEVSDVFR"	"[R].eAAGVLSGEVSDVFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"588.97540"	"1764.91166"	"1764.93294"	"-12.06"	"-0.00710"	"3/134"	"3"	"134"	"398645.634155273"	"HCD"	"MS2"	"54.07178"	"12.2"	"100.000"	"96.8419"	"34286"	"34286"	"34267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"18.1"	""	"18.7"	""	"19.6"	""	"21.9"	"26.9"	""	"1057"	"3"	"37.000"	"30.000"	"26.1243198072542"	"13"	"0.007412"	"0.09378"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"EAAGVLSGEVSDVFR"	"[R].eAAGVLSGEVSDVFR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"P51111"	"Huntingtin OS=Rattus norvegicus OX=10116 GN=Htt PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"588.97614"	"1764.91385"	"1764.93294"	"-10.82"	"-0.00636"	"4/134"	"4"	"134"	"220857.467712402"	"HCD"	"MS2"	"32.04604"	"10.1"	"100.000"	"98.7556"	"35090"	"35090"	"35068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"10.8"	""	"12.3"	""	"15.7"	""	"24.1"	"23.7"	""	"1090"	"1"	"37.000"	"30.000"	"41.1525264077661"	"14"	"0.008255"	"0.105"	"0.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLAQDSATSTK"	"[K].dLGLAQDSATSTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"2"	"2"	"0.2273"	"0.0000"	"1"	"1"	"1"	"882.98907"	"1764.97087"	"1764.97436"	"-1.98"	"-0.00175"	"6/132"	"6"	"132"	"152342.175292969"	"HCD"	"MS2"	"0"	"14.7"	"100.000"	"65.4978"	"21613"	"21613"	"21583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"15.8"	""	"17.8"	""	"25.2"	""	"23.9"	"27.9"	""	"1184"	"22"	"37.000"	"30.000"	"0.394749607374464"	""	"0.0001686"	"0.001826"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KSEIGIAMGSGTAVAK"	"[K].KSEIGIAmGSGTAVAk.[T]"	"M8(Oxidation); K16(TMT6plex)"	"1"	"1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"P11507"	"Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Rattus norvegicus OX=10116 GN=Atp2a2 PE=1 SV=1"	"1"	"2"	"2"	"0.3704"	"0.0000"	"1"	"1"	"1"	"882.98956"	"1764.97185"	"1764.97270"	"-0.48"	"-0.00043"	"6/170"	"6"	"170"	"105458.099975586"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"65.4552"	"21629"	"21629"	"21600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"13.1"	""	"10.7"	""	"13.2"	""	"16.8"	"13.4"	""	"1170"	"27"	"37.000"	"30.000"	"0.112242121329212"	""	"0.008327"	"0.1066"	"0.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLGLAQDSATSTK"	"[K].dLGLAQDSATSTk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"2"	"2"	"0.2632"	"0.0000"	"1"	"1"	"1"	"882.99017"	"1764.97307"	"1764.97436"	"-0.73"	"-0.00065"	"5/132"	"5"	"132"	"112311.203552246"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"65.7892"	"21765"	"21765"	"21741"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"8.2"	""	"15.9"	""	"16.9"	""	"17.6"	"21.2"	""	"1168"	"19"	"37.000"	"30.000"	"0.793255052806898"	"28"	"0.002834"	"0.02984"	"0.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"589.00098"	"1764.98838"	"1764.98962"	"-0.70"	"-0.00041"	"9/106"	"9"	"106"	"3921732.6361084"	"HCD"	"MS2"	"5.669261"	"103.3"	"100.000"	"70.2573"	"23577"	"23577"	"23563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.6"	""	"127.0"	""	"122.5"	""	"163.5"	"0.9"	"209.1"	"221.3"	""	"1046"	"54"	"37.000"	"30.000"	"0.000206776742295631"	"19"	"0"	"9.829E-06"	"0.861"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"882.99799"	"1764.98870"	"1764.98962"	"-0.52"	"-0.00046"	"18/106"	"18"	"106"	"480820.922302246"	"HCD"	"MS2"	"35.30138"	"36.9"	"100.000"	"69.9229"	"23441"	"23441"	"23420"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"50.5"	""	"42.8"	""	"60.4"	"1.1"	"67.8"	"72.7"	""	"1041"	"48"	"37.000"	"30.000"	"0.000787808629811046"	"16"	"0"	"1.801E-06"	"1.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9726"	"0.0000"	"1"	"1"	"1"	"882.99823"	"1764.98918"	"1764.98962"	"-0.25"	"-0.00022"	"10/106"	"10"	"106"	"617205.257446289"	"HCD"	"MS2"	"0"	"51.8"	"100.000"	"70.1471"	"23498"	"23498"	"23480"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.8"	""	"61.0"	""	"65.0"	""	"90.3"	""	"93.8"	"118.3"	""	"1054"	"73"	"37.000"	"30.000"	"2.84322098065472E-06"	"19"	"0"	"4.326E-07"	"1.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"589.00128"	"1764.98929"	"1764.98962"	"-0.19"	"-0.00011"	"13/106"	"13"	"106"	"4053251.54278564"	"HCD"	"MS2"	"14.37175"	"101.6"	"100.000"	"69.8842"	"23391"	"23391"	"23374"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.4"	""	"131.3"	""	"113.7"	""	"185.4"	""	"202.7"	"196.1"	""	"1059"	"51"	"37.000"	"30.000"	"0.000375721428136614"	"20"	"0"	"1.715E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"589.00140"	"1764.98966"	"1764.98962"	"0.02"	"0.00001"	"13/106"	"13"	"106"	"1373549.66937256"	"HCD"	"MS2"	"14.61526"	"46.1"	"100.000"	"70.2903"	"23556"	"23556"	"23541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.3"	""	"56.4"	""	"60.0"	""	"65.3"	""	"90.4"	"112.5"	""	"1058"	"42"	"37.000"	"30.000"	"0.00321703415676442"	"19"	"0"	"2.236E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"882.99847"	"1764.98967"	"1764.98962"	"0.03"	"0.00003"	"11/106"	"11"	"106"	"770206.285888672"	"HCD"	"MS2"	"0"	"63.3"	"100.000"	"70.2318"	"23566"	"23566"	"23547"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"90.3"	""	"72.9"	""	"87.9"	""	"99.3"	""	"116.8"	"133.9"	""	"1056"	"87"	"37.000"	"30.000"	"9.47619354967575E-08"	"21"	"0"	"1.664E-09"	"1.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"2"	"2"	"0.9571"	"0.0000"	"1"	"1"	"1"	"882.99854"	"1764.98979"	"1764.98962"	"0.10"	"0.00009"	"10/106"	"10"	"106"	"501995.570861816"	"HCD"	"MS2"	"28.15888"	"39.2"	"100.000"	"69.8244"	"23367"	"23367"	"23344"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.8"	""	"51.1"	""	"52.4"	""	"59.8"	""	"80.2"	"76.3"	""	"1056"	"70"	"37.000"	"30.000"	"5.74955089280054E-06"	"20"	"0"	"3.834E-07"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AIVAGDQNVEYK"	"[K].aIVAGDQNVEYk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"Q9WUH4"	"Four and a half LIM domains protein 1 OS=Rattus norvegicus OX=10116 GN=Fhl1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"589.00146"	"1764.98984"	"1764.98962"	"0.13"	"0.00007"	"13/106"	"13"	"106"	"3229291.60845947"	"HCD"	"MS2"	"17.88995"	"90.8"	"100.000"	"69.9505"	"23452"	"23452"	"23435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.3"	""	"118.9"	""	"113.8"	""	"150.6"	"4.4"	"166.1"	"177.2"	""	"1056"	"43"	"37.000"	"30.000"	"0.00248676028337591"	"15"	"0"	"3.408E-05"	"0.75"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"589.63763"	"1766.89835"	"1766.90014"	"-1.01"	"-0.00060"	"12/110"	"12"	"110"	"868141.54876709"	"HCD"	"MS2"	"21.70771"	"25.2"	"100.000"	"91.5315"	"32138"	"32138"	"32116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.2"	""	"50.7"	""	"31.3"	""	"45.7"	""	"34.1"	"27.0"	""	"1029"	"38"	"37.000"	"30.000"	"0.00735165941653961"	"16"	"0"	"0.000122"	"0.636"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"589.63800"	"1766.89945"	"1766.90014"	"-0.39"	"-0.00023"	"9/110"	"9"	"110"	"426748.87487793"	"HCD"	"MS2"	"17.13663"	"14.9"	"100.000"	"91.8426"	"32300"	"32300"	"32280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"27.6"	""	"16.1"	""	"23.9"	""	"27.4"	"24.0"	""	"1047"	"27"	"37.000"	"30.000"	"0.104692768875274"	"20"	"0.0001686"	"0.001903"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"589.63812"	"1766.89981"	"1766.90014"	"-0.18"	"-0.00011"	"12/110"	"12"	"110"	"806663.149414063"	"HCD"	"MS2"	"11.8077"	"23.2"	"100.000"	"91.8268"	"32258"	"32258"	"32240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.2"	""	"40.1"	""	"29.0"	""	"44.3"	""	"41.3"	"29.9"	""	"1044"	"45"	"37.000"	"30.000"	"0.001474587346906"	"16"	"0"	"0.0001907"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"589.63824"	"1766.90018"	"1766.90014"	"0.02"	"0.00001"	"11/110"	"11"	"110"	"937404.942199707"	"HCD"	"MS2"	"17.35936"	"28.5"	"100.000"	"91.4547"	"32143"	"32143"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"64.7"	""	"29.1"	""	"46.0"	""	"42.0"	"28.9"	""	"1038"	"39"	"37.000"	"30.000"	"0.00590428561342361"	"16"	"0"	"0.0001389"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.95404"	"1766.90080"	"1766.90014"	"0.38"	"0.00033"	"12/110"	"12"	"110"	"151806.153686523"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"91.4269"	"32132"	"32132"	"32109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"34.4"	""	"11.9"	""	"30.9"	""	"16.6"	"15.0"	""	"1057"	"46"	"37.000"	"30.000"	"0.00133981548121814"	"15"	"0"	"4.661E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.95404"	"1766.90080"	"1766.90014"	"0.38"	"0.00033"	"15/110"	"15"	"110"	"251350.270568848"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"91.6146"	"32172"	"32172"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.6"	""	"53.4"	""	"24.6"	""	"48.0"	""	"30.1"	"22.1"	""	"1057"	"55"	"37.000"	"30.000"	"0.000182408466239"	"16"	"0"	"5.849E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTFQSEFYSGK"	"[R].dTFQSEFYSGk.[R]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"883.95435"	"1766.90141"	"1766.90014"	"0.72"	"0.00064"	"6/110"	"6"	"110"	"149665.301086426"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"91.7362"	"32257"	"32257"	"32237"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"35.1"	""	"21.1"	""	"26.3"	""	"23.5"	"20.2"	""	"1056"	"19"	"37.000"	"30.000"	"0.728842891710323"	"14"	"0.0001991"	"0.003629"	"0.333"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.7358"	"0.0000"	"1"	"1"	"1"	"589.65808"	"1766.95969"	"1766.96102"	"-0.75"	"-0.00044"	"11/106"	"11"	"106"	"450027.252258301"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"88.6056"	"30959"	"30959"	"30940"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"15.9"	""	"17.8"	""	"25.0"	""	"33.8"	"31.8"	""	"1063"	"53"	"37.000"	"30.000"	"0.000265768355340264"	"30"	"0"	"2.041E-05"	"0.796"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"589.65808"	"1766.95969"	"1766.96102"	"-0.75"	"-0.00044"	"12/106"	"12"	"106"	"485285.488891602"	"HCD"	"MS2"	"10.60591"	"18.5"	"100.000"	"88.8985"	"31078"	"31078"	"31057"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"15.5"	""	"22.2"	""	"31.3"	""	"41.1"	"46.1"	""	"1063"	"45"	"37.000"	"30.000"	"0.00175996191067997"	"24"	"0"	"3.889E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8727"	"0.0000"	"1"	"1"	"1"	"589.65814"	"1766.95987"	"1766.96102"	"-0.65"	"-0.00038"	"12/106"	"12"	"106"	"614535.835754395"	"HCD"	"MS2"	"13.82855"	"20.8"	"100.000"	"88.7083"	"31040"	"31040"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.1"	""	"26.2"	""	"19.7"	""	"43.9"	""	"40.7"	"47.6"	""	"1058"	"55"	"37.000"	"30.000"	"0.000180907125089752"	"23"	"0"	"1.865E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"589.65875"	"1766.96170"	"1766.96102"	"0.39"	"0.00023"	"12/106"	"12"	"106"	"457563.209472656"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"88.3806"	"30908"	"30908"	"30886"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"15.3"	""	"18.8"	""	"26.4"	"0.7"	"34.3"	"37.7"	""	"1072"	"45"	"37.000"	"30.000"	"0.0016412124004582"	"23"	"0"	"8.243E-05"	"0.671"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTGLVDEAIDTK"	"[K].mTGLVDEAIDTk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"3"	"883.98505"	"1766.96282"	"1766.96102"	"1.01"	"0.00090"	"4/106"	"4"	"106"	"100215.154052734"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"88.2563"	"30858"	"30858"	"30831"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.2"	""	"6.1"	""	"7.9"	""	"16.9"	""	"19.5"	"17.8"	""	"1044"	"19"	"37.000"	"30.000"	"0.66630105819952"	"24"	"0.008135"	"0.1033"	"0.025"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"589.98132"	"1767.92942"	"1767.93177"	"-1.33"	"-0.00078"	"7/96"	"7"	"96"	"661122.428405762"	"HCD"	"MS2"	"61.82693"	"24.5"	"100.000"	"99.4787"	"35381"	"35381"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.5"	""	"31.9"	""	"26.8"	""	"37.9"	"0.8"	"51.8"	"55.6"	""	"1118"	"32"	"37.000"	"30.000"	"0.0352705155564428"	"18"	"9.9E-05"	"0.0004394"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7895"	"0.0000"	"1"	"1"	"1"	"884.46924"	"1767.93120"	"1767.93177"	"-0.32"	"-0.00029"	"9/96"	"9"	"96"	"836542.283813477"	"HCD"	"MS2"	"0"	"80.9"	"100.000"	"99.7084"	"35446"	"35446"	"35429"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.8"	""	"113.0"	""	"101.7"	""	"105.4"	""	"170.2"	"179.8"	""	"1096"	"57"	"37.000"	"30.000"	"0.000118790184944119"	"28"	"0"	"8.109E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"589.98212"	"1767.93180"	"1767.93177"	"0.01"	"0.00001"	"7/96"	"7"	"96"	"1996503.37390137"	"HCD"	"MS2"	"13.14142"	"57.8"	"100.000"	"99.4915"	"35357"	"35357"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"81.1"	""	"78.9"	""	"63.3"	""	"75.9"	""	"120.2"	"134.1"	""	"1078"	"39"	"37.000"	"30.000"	"0.00669250593792309"	"24"	"0"	"0.0001264"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"589.98236"	"1767.93253"	"1767.93177"	"0.43"	"0.00025"	"13/96"	"13"	"96"	"2369913.36901855"	"HCD"	"MS2"	"5.99943"	"62.5"	"100.000"	"99.7722"	"35499"	"35499"	"35482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.9"	""	"86.1"	""	"81.6"	""	"94.1"	""	"120.1"	"135.7"	""	"1074"	"37"	"37.000"	"30.000"	"0.0102087903631881"	"22"	"0"	"0.0001614"	"0.611"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8065"	"0.0000"	"1"	"1"	"1"	"884.46997"	"1767.93266"	"1767.93177"	"0.51"	"0.00045"	"18/96"	"18"	"96"	"903562.952941895"	"HCD"	"MS2"	"0"	"89.4"	"100.000"	"99.7673"	"35497"	"35497"	"35482"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"119.3"	""	"119.4"	""	"105.4"	""	"120.7"	"0.7"	"179.5"	"203.5"	""	"1075"	"62"	"37.000"	"30.000"	"3.25370720180228E-05"	"29"	"0"	"1.474E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"589.98273"	"1767.93363"	"1767.93177"	"1.05"	"0.00062"	"9/96"	"9"	"96"	"952128.89666748"	"HCD"	"MS2"	"6.064355"	"30.3"	"100.000"	"99.7888"	"35478"	"35478"	"35461"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.6"	""	"36.5"	""	"39.9"	""	"47.1"	""	"63.4"	"65.7"	""	"1090"	"27"	"37.000"	"30.000"	"0.104808499225604"	"17"	"0.0001991"	"0.002641"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"884.47168"	"1767.93608"	"1767.93177"	"2.44"	"0.00216"	"14/96"	"14"	"96"	"260803.149841309"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"99.4222"	"35329"	"35329"	"35306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.1"	""	"32.4"	""	"31.5"	""	"44.9"	""	"49.1"	"46.3"	""	"1080"	"44"	"37.000"	"30.000"	"0.00209119128257673"	"26"	"0"	"3.107E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLQEAEEWYK"	"[K].nLQEAEEWYk.[S]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P21807; P31000"	"Peripherin OS=Rattus norvegicus OX=10116 GN=Prph PE=1 SV=1; Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"884.47253"	"1767.93779"	"1767.93177"	"3.41"	"0.00301"	"12/96"	"12"	"96"	"261054.838012695"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"99.4856"	"35384"	"35384"	"35356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.1"	""	"34.1"	""	"27.9"	""	"40.6"	""	"53.3"	"54.1"	""	"1059"	"35"	"37.000"	"30.000"	"0.0174126938548833"	"20"	"0"	"0.0001153"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSLEEEK"	"[R].dLLHPSLEEEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"590.00061"	"1767.98728"	"1767.98929"	"-1.14"	"-0.00067"	"11/98"	"11"	"98"	"784898.746826172"	"HCD"	"MS2"	"13.37945"	"27.1"	"100.000"	"77.1381"	"26333"	"26333"	"26314"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"30.9"	""	"35.2"	""	"48.3"	"0.7"	"59.6"	"44.3"	""	"981"	"44"	"36.000"	"29.000"	"0.00212148034122672"	"22"	"0"	"0.0001989"	"0.592"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLLHPSLEEEK"	"[R].dLLHPSLEEEk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"P24051"	"40S ribosomal protein S27-like OS=Rattus norvegicus OX=10116 GN=Rps27l PE=1 SV=3"	"0"	"3"	"3"	"0.8293"	"0.0000"	"1"	"1"	"1"	"590.00085"	"1767.98801"	"1767.98929"	"-0.72"	"-0.00043"	"11/98"	"11"	"98"	"726869.193908691"	"HCD"	"MS2"	"45.52365"	"27.4"	"100.000"	"77.2944"	"26425"	"26425"	"26406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.8"	""	"35.2"	""	"37.4"	""	"46.6"	""	"53.8"	"46.1"	""	"981"	"41"	"36.000"	"29.000"	"0.00351268342709428"	"22"	"0"	"9.757E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENLENIDVHVK"	"[R].eNLENIDVHVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"590.00458"	"1767.99918"	"1768.00052"	"-0.76"	"-0.00045"	"13/110"	"13"	"110"	"550361.459289551"	"HCD"	"MS2"	"54.02776"	"25.6"	"100.000"	"73.8507"	"25031"	"25031"	"25006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"37.9"	""	"36.6"	""	"43.5"	""	"47.1"	"44.9"	""	"909"	"39"	"36.000"	"29.000"	"0.00613103630137906"	"16"	"0"	"2.932E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ENLENIDVHVK"	"[R].eNLENIDVHVk.[L]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"Q4G075"	"Leukocyte elastase inhibitor A OS=Rattus norvegicus OX=10116 GN=Serpinb1a PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"590.00500"	"1768.00046"	"1768.00052"	"-0.03"	"-0.00002"	"11/110"	"11"	"110"	"542711.262329102"	"HCD"	"MS2"	"55.82301"	"26.2"	"100.000"	"73.7045"	"24942"	"24942"	"24918"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.9"	""	"32.1"	""	"40.4"	""	"43.4"	""	"48.0"	"52.1"	""	"887"	"27"	"36.000"	"29.000"	"0.0937332389167552"	"16"	"9.9E-05"	"0.0007268"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSNGFLIDGYPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.9216"	"0.0000"	"1"	"1"	"1"	"884.95691"	"1768.90654"	"1768.90673"	"-0.11"	"-0.00009"	"8/138"	"8"	"138"	"199846.096374512"	"HCD"	"MS2"	"0"	"12.1"	"100.000"	"102.6681"	"36645"	"36645"	"36625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"19.8"	""	"17.8"	""	"18.0"	""	"13.3"	"22.0"	""	"1020"	"51"	"37.000"	"30.000"	"0.000381566445260689"	"20"	"0"	"0.0001137"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSNGFLIDGYPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"884.95764"	"1768.90801"	"1768.90673"	"0.72"	"0.00064"	"8/138"	"8"	"138"	"196035.545837402"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"102.8810"	"36753"	"36753"	"36733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"18.2"	""	"17.5"	""	"22.0"	""	"15.3"	"21.2"	""	"1019"	"45"	"37.000"	"30.000"	"0.00161489462242066"	"18"	"0.0001991"	"0.002288"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSNGFLIDGYPR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.31207"	"1768.92167"	"1768.90673"	"8.44"	"0.00498"	"10/138"	"10"	"138"	"512122.776245117"	"HCD"	"MS2"	"38.9821"	"9.5"	"100.000"	"106.7909"	"38307"	"38307"	"38288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"13.9"	""	"10.7"	""	"17.9"	""	"15.4"	"16.7"	""	"1007"	"13"	"37.000"	"30.000"	"2.25943303831332"	"13"	"0.0007633"	"0.007532"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.44531"	"1769.88335"	"1769.89075"	"-4.18"	"-0.00370"	"12/138"	"12"	"138"	"311630.697937012"	"HCD"	"MS2"	"44.71459"	"16.6"	"100.000"	"106.9020"	"38351"	"38351"	"38335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.5"	""	"18.9"	""	"22.8"	""	"25.1"	""	"28.4"	"36.0"	""	"888"	"23"	"36.000"	"29.000"	"0.232478593844073"	"14"	"0"	"0.0002214"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"885.44568"	"1769.88408"	"1769.89075"	"-3.77"	"-0.00333"	"8/138"	"8"	"138"	"317251.037658691"	"HCD"	"MS2"	"37.05597"	"17.8"	"100.000"	"106.6443"	"38230"	"38230"	"38211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.6"	""	"30.5"	""	"24.3"	""	"28.4"	""	"28.8"	"32.3"	""	"888"	"20"	"36.000"	"29.000"	"0.468147781997718"	"16"	"0.0001991"	"0.002297"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.44830"	"1769.88933"	"1769.89075"	"-0.80"	"-0.00071"	"7/138"	"7"	"138"	"110847.760375977"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"106.3325"	"38106"	"38106"	"38094"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"7.9"	""	"10.3"	""	"8.1"	""	"9.8"	"13.3"	""	"901"	"7"	"36.000"	"29.000"	"9.90135872689563"	"13"	"0.00307"	"0.03428"	"0.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQDTAELFFEDVR"	"[K].aQDTAELFFEDVR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"P15650"	"Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.44867"	"1769.89006"	"1769.89075"	"-0.39"	"-0.00034"	"11/134"	"11"	"134"	"168670.54107666"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"111.8824"	"40272"	"40272"	"40253"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"13.8"	""	"15.0"	""	"12.0"	""	"12.5"	"16.2"	""	"901"	"20"	"36.000"	"29.000"	"0.47064645875897"	"14"	"0"	"0.0002568"	"0.57"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDSSNGFLIDGYPR"	"[K].vDSSnGFLIDGYPR.[E]"	"N-Term(TMT6plex); N5(Deamidated)"	"1"	"1"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"P39069"	"Adenylate kinase isoenzyme 1 OS=Rattus norvegicus OX=10116 GN=Ak1 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"885.44879"	"1769.89031"	"1769.89075"	"-0.25"	"-0.00022"	"8/138"	"8"	"138"	"101770.712036133"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"106.6222"	"38240"	"38240"	"38217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"7.6"	""	"10.2"	""	"9.3"	""	"8.8"	"12.7"	""	"912"	"12"	"36.000"	"29.000"	"2.72875687347505"	"19"	"0.002525"	"0.02402"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPHVPNEMLYGR"	"[K].iDPHVPNEMLYGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.64343"	"1769.91574"	"1769.92061"	"-2.75"	"-0.00162"	"12/120"	"12"	"120"	"407820.451965332"	"HCD"	"MS2"	"14.88786"	"9.5"	"100.000"	"88.0260"	"30764"	"30764"	"30739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"14.5"	""	"12.0"	""	"16.1"	""	"14.2"	"17.3"	""	"1014"	"26"	"37.000"	"30.000"	"0.13458850199216"	"14"	"0"	"9.825E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPHVPNEMLYGR"	"[K].iDPHVPNEMLYGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.64453"	"1769.91904"	"1769.92061"	"-0.88"	"-0.00052"	"12/120"	"12"	"120"	"905890.513244629"	"HCD"	"MS2"	"16.87358"	"15.8"	"100.000"	"88.3415"	"30892"	"30892"	"30873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.6"	""	"20.1"	""	"27.3"	""	"19.9"	""	"29.4"	"30.6"	""	"1036"	"21"	"37.000"	"30.000"	"0.427887657880979"	"14"	"0"	"0.0002258"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPHVPNEMLYGR"	"[K].iDPHVPNEMLYGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.64465"	"1769.91941"	"1769.92061"	"-0.68"	"-0.00040"	"10/120"	"10"	"120"	"480944.373718262"	"HCD"	"MS2"	"21.10902"	"11.4"	"100.000"	"88.1657"	"30782"	"30782"	"30760"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.4"	""	"16.1"	""	"16.3"	""	"13.8"	"1.7"	"21.3"	"21.5"	""	"1046"	"23"	"37.000"	"30.000"	"0.235777136475184"	"14"	"0"	"0.0002764"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDPHVPNEMLYGR"	"[K].iDPHVPNEMLYGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"Q9QX69"	"Glutathione S-transferase LANCL1 OS=Rattus norvegicus OX=10116 GN=Lancl1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.64478"	"1769.91977"	"1769.92061"	"-0.47"	"-0.00028"	"8/120"	"8"	"120"	"905336.469177246"	"HCD"	"MS2"	"17.47908"	"18.0"	"100.000"	"88.4673"	"30903"	"30903"	"30889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"19.8"	""	"28.7"	""	"24.1"	""	"34.7"	"36.6"	""	"1044"	"12"	"37.000"	"30.000"	"2.98311848342714"	"14"	"0.0001686"	"0.001038"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].QEPGENSEILPSLk.[Y]"	"K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"885.47681"	"1769.94634"	"1769.94826"	"-1.09"	"-0.00096"	"7/150"	"7"	"150"	"219867.753845215"	"HCD"	"MS2"	"13.30724"	"6.0"	"100.000"	"110.6950"	"39803"	"39803"	"39772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.6"	""	"7.7"	""	"7.6"	""	"10.8"	""	"14.1"	"10.5"	""	"1057"	"34"	"37.000"	"30.000"	"0.0191886751945999"	"21"	"0.0009352"	"0.008123"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].QEPGENSEILPSLk.[Y]"	"K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"885.47772"	"1769.94817"	"1769.94826"	"-0.05"	"-0.00005"	"7/150"	"7"	"150"	"191852.028869629"	"HCD"	"MS2"	"14.88735"	"6.4"	"100.000"	"110.5794"	"39742"	"39742"	"39719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"8.4"	""	"7.9"	""	"9.2"	""	"9.5"	"14.2"	""	"1030"	"26"	"37.000"	"30.000"	"0.134526309751559"	"27"	"0.0007633"	"0.007407"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQISPLDNGDLVR"	"[R].tLQISPLDNGDLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"885.50043"	"1769.99358"	"1769.99588"	"-1.30"	"-0.00115"	"10/146"	"10"	"146"	"192602.502990723"	"HCD"	"MS2"	"41.28094"	"11.7"	"100.000"	"107.0431"	"38407"	"38407"	"38390"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.8"	""	"14.8"	""	"15.3"	""	"23.2"	""	"21.5"	"18.7"	""	"919"	"20"	"36.000"	"29.000"	"0.432798269602246"	"14"	"9.9E-05"	"0.0005735"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQISPLDNGDLVR"	"[R].tLQISPLDNGDLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"885.50055"	"1769.99382"	"1769.99588"	"-1.16"	"-0.00103"	"10/146"	"10"	"146"	"211264.011474609"	"HCD"	"MS2"	"44.89597"	"11.6"	"100.000"	"106.7160"	"38259"	"38259"	"38239"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"15.5"	""	"16.8"	""	"22.6"	""	"20.7"	"17.4"	""	"919"	"24"	"36.000"	"29.000"	"0.189795327164479"	"17"	"9.9E-05"	"0.0005998"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQISPLDNGDLVR"	"[R].tLQISPLDNGDLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.66974"	"1769.99466"	"1769.99588"	"-0.69"	"-0.00041"	"11/146"	"11"	"146"	"360924.236877441"	"HCD"	"MS2"	"58.39845"	"6.0"	"100.000"	"107.0754"	"38420"	"38420"	"38401"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"5.9"	""	"9.7"	""	"10.6"	""	"10.3"	"8.1"	""	"907"	"23"	"36.000"	"29.000"	"0.225204617777727"	"14"	"0"	"0.0002892"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQISPLDNGDLVR"	"[R].tLQISPLDNGDLVR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"590.66980"	"1769.99485"	"1769.99588"	"-0.58"	"-0.00034"	"11/146"	"11"	"146"	"270298.311401367"	"HCD"	"MS2"	"53.96484"	"7.2"	"100.000"	"106.8245"	"38303"	"38303"	"38285"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"9.1"	""	"8.8"	""	"9.1"	""	"14.8"	"16.7"	""	"901"	"34"	"36.000"	"29.000"	"0.0181006760287447"	"19"	"0"	"0.0001428"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.8125"	"0.0000"	"1"	"1"	"1"	"885.94623"	"1770.88518"	"1770.88599"	"-0.46"	"-0.00041"	"7/134"	"7"	"134"	"213916.784790039"	"HCD"	"MS2"	"4.512589"	"16.3"	"100.000"	"86.5176"	"30155"	"30155"	"30142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"21.9"	""	"15.3"	""	"29.2"	""	"33.6"	"28.6"	""	"827"	"32"	"36.000"	"29.000"	"0.0276360209914622"	"21"	"9.9E-05"	"0.0009621"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.5769"	"0.0000"	"1"	"1"	"1"	"885.94629"	"1770.88530"	"1770.88599"	"-0.39"	"-0.00035"	"6/134"	"6"	"134"	"186825.725585938"	"HCD"	"MS2"	"0"	"14.9"	"100.000"	"86.5135"	"30121"	"30121"	"30111"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.5"	""	"18.5"	""	"15.1"	""	"27.3"	""	"36.2"	"23.3"	""	"829"	"26"	"36.000"	"29.000"	"0.115484722439704"	"25"	"0"	"0.0001672"	"0.608"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"885.94653"	"1770.88579"	"1770.88599"	"-0.12"	"-0.00010"	"5/134"	"5"	"134"	"101647.498779297"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"86.2293"	"30041"	"30041"	"30020"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.9"	""	"8.5"	""	"6.7"	""	"15.0"	""	"15.7"	"14.0"	""	"832"	"5"	"36.000"	"29.000"	"13.1550750663004"	"13"	"0.006198"	"0.07554"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GQFEDVTLYQGER"	"[K].gQFEDVTLYQGER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"P13635"	"Ceruloplasmin OS=Rattus norvegicus OX=10116 GN=Cp PE=1 SV=3"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"885.94678"	"1770.88628"	"1770.88599"	"0.16"	"0.00014"	"5/134"	"5"	"134"	"101113.805969238"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"86.2438"	"30015"	"30015"	"29994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"10.8"	""	"6.4"	""	"15.7"	""	"14.6"	"12.3"	""	"830"	"12"	"36.000"	"29.000"	"2.74187780923152"	"14"	"0.003704"	"0.04004"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEEHLAVK"	"[K].SLTNDWEEHLAVk.[H]"	"K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"590.97876"	"1770.92173"	"1770.92238"	"-0.37"	"-0.00022"	"4/128"	"4"	"128"	"263191.261962891"	"HCD"	"MS2"	"29.45968"	"11.3"	"100.000"	"89.7136"	"31404"	"31404"	"31384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"12.2"	""	"16.2"	""	"15.9"	""	"23.2"	"21.7"	""	"1036"	"15"	"37.000"	"30.000"	"1.72317648606294"	"22"	"0.002559"	"0.02604"	"0.155"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHVPLDEYSANLR"	"[K].qHVPLDEYSANLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.98254"	"1770.93308"	"1770.93361"	"-0.30"	"-0.00018"	"8/126"	"8"	"126"	"1290817.45269775"	"HCD"	"MS2"	"39.16917"	"25.1"	"100.000"	"57.7322"	"18493"	"18493"	"18466"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.5"	""	"24.0"	""	"35.0"	""	"43.3"	"0.7"	"49.6"	"47.2"	""	"1090"	"33"	"37.000"	"30.000"	"0.0296071430663376"	"15"	"0"	"0.000108"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QHVPLDEYSANLR"	"[K].qHVPLDEYSANLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"Q711G3"	"Isoamyl acetate-hydrolyzing esterase 1 homolog OS=Rattus norvegicus OX=10116 GN=Iah1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.98267"	"1770.93344"	"1770.93361"	"-0.09"	"-0.00006"	"10/126"	"10"	"126"	"939996.888427734"	"HCD"	"MS2"	"41.18858"	"24.7"	"100.000"	"57.9509"	"18547"	"18547"	"18518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.6"	""	"24.2"	""	"36.4"	""	"44.3"	""	"55.5"	"38.9"	""	"1087"	"30"	"37.000"	"30.000"	"0.0514279897202309"	"14"	"0"	"0.000195"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TLQISPLDNGDLVR"	"[R].tLQISPLDnGDLVR.[E]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"P81718"	"Tyrosine-protein phosphatase non-receptor type 6 OS=Rattus norvegicus OX=10116 GN=Ptpn6 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"885.99274"	"1770.97820"	"1770.97989"	"-0.96"	"-0.00085"	"7/146"	"7"	"146"	"66703.3285522461"	"HCD"	"MS2"	"17.36626"	"2.6"	"100.000"	"109.6873"	"39383"	"39383"	"39367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.7"	""	"4.3"	""	"1.9"	""	"3.3"	""	"5.6"	"4.3"	""	"1048"	"19"	"37.000"	"30.000"	"0.711756246011668"	"14"	"0.0001686"	"0.001862"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEQLVPTLEK"	"[R].qQEQLVPTLEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7419"	"0.0000"	"1"	"1"	"1"	"591.01624"	"1771.03415"	"1771.03657"	"-1.37"	"-0.00081"	"11/114"	"11"	"114"	"741462.665649414"	"HCD"	"MS2"	"35.36994"	"18.0"	"100.000"	"88.5987"	"30956"	"30956"	"30940"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"19.5"	""	"23.5"	""	"26.4"	""	"29.7"	"41.9"	""	"760"	"31"	"35.000"	"28.000"	"0.0328687809134763"	"23"	"0"	"5.136E-05"	"0.713"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQEQLVPTLEK"	"[R].qQEQLVPTLEk.[F]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"591.01654"	"1771.03507"	"1771.03657"	"-0.85"	"-0.00050"	"11/114"	"11"	"114"	"643263.772399902"	"HCD"	"MS2"	"30.34564"	"19.1"	"100.000"	"88.5696"	"30984"	"30984"	"30962"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"27.7"	""	"19.3"	""	"30.0"	""	"41.2"	"37.5"	""	"757"	"35"	"35.000"	"28.000"	"0.0108909529997745"	"23"	"0"	"6.019E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"591.35980"	"1772.06485"	"1772.06821"	"-1.89"	"-0.00112"	"12/110"	"12"	"110"	"1454451.7255249"	"HCD"	"MS2"	"50.73219"	"49.8"	"100.000"	"86.6200"	"30162"	"30162"	"30148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.1"	""	"64.0"	""	"61.6"	""	"85.5"	""	"100.8"	"103.3"	""	"485"	"17"	"33.000"	"26.000"	"0.531755196822484"	"20"	"9.9E-05"	"0.0004907"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"591.36005"	"1772.06559"	"1772.06821"	"-1.48"	"-0.00087"	"15/110"	"15"	"110"	"1195091.50286865"	"HCD"	"MS2"	"1.450464"	"50.1"	"100.000"	"87.2123"	"30434"	"30434"	"30419"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.7"	""	"50.8"	""	"52.6"	""	"91.3"	"0.6"	"113.9"	"110.8"	""	"478"	"26"	"33.000"	"26.000"	"0.0644759724354336"	"20"	"0"	"1.92E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36011"	"1772.06577"	"1772.06821"	"-1.37"	"-0.00081"	"13/110"	"13"	"110"	"2233356.72589111"	"HCD"	"MS2"	"25.96296"	"79.3"	"100.000"	"86.6309"	"30200"	"30200"	"30190"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.5"	""	"93.8"	""	"89.6"	""	"145.8"	""	"157.5"	"170.4"	""	"478"	"24"	"33.000"	"26.000"	"0.088185646058266"	"14"	"0"	"6.761E-06"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36029"	"1772.06632"	"1772.06821"	"-1.06"	"-0.00063"	"8/110"	"8"	"110"	"1744679.71929932"	"HCD"	"MS2"	"6.250907"	"65.0"	"100.000"	"87.2408"	"30412"	"30412"	"30398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"68.9"	""	"66.5"	""	"63.1"	""	"120.6"	""	"144.9"	"155.5"	""	"478"	"33"	"33.000"	"26.000"	"0.012485268917079"	"15"	"0"	"7.474E-06"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"591.36053"	"1772.06705"	"1772.06821"	"-0.65"	"-0.00038"	"8/110"	"8"	"110"	"5702712.95233154"	"HCD"	"MS2"	"3.883085"	"197.2"	"100.000"	"86.9201"	"30283"	"30283"	"30267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"231.0"	""	"218.0"	""	"201.7"	""	"364.2"	""	"430.0"	"432.0"	""	"477"	"32"	"33.000"	"26.000"	"0.0168069296948665"	"22"	"0"	"1.163E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36060"	"1772.06723"	"1772.06821"	"-0.55"	"-0.00032"	"6/110"	"6"	"110"	"217431.136291504"	"HCD"	"MS2"	"9.576165"	"12.0"	"100.000"	"87.5960"	"30554"	"30554"	"30533"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"17.1"	""	"12.7"	""	"19.8"	""	"22.3"	"23.6"	""	"451"	"5"	"33.000"	"26.000"	"7.29703696376312"	"13"	"0.004593"	"0.05425"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KLEVNEAELLR"	"[K].kLEVNEAELLR.[R]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.36078"	"1772.06778"	"1772.06821"	"-0.24"	"-0.00014"	"8/110"	"8"	"110"	"6083774.4899292"	"HCD"	"MS2"	"3.82576"	"212.9"	"100.000"	"86.9170"	"30316"	"30316"	"30299"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"250.7"	""	"229.8"	""	"209.8"	""	"403.0"	"3.2"	"452.6"	"475.2"	""	"451"	"32"	"33.000"	"26.000"	"0.0144926080254988"	"14"	"0"	"6.059E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAEETWMVIHGR"	"[R].nTAEETWMVIHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"591.63611"	"1772.89377"	"1772.89512"	"-0.76"	"-0.00045"	"15/128"	"15"	"128"	"968394.261108398"	"HCD"	"MS2"	"0"	"14.2"	"100.000"	"75.6645"	"25768"	"25768"	"25745"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"21.0"	""	"18.1"	""	"24.8"	""	"23.3"	"33.0"	""	"849"	"62"	"36.000"	"29.000"	"2.52858579928065E-05"	"22"	"0"	"1.011E-07"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAEETWMVIHGR"	"[R].nTAEETWMVIHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"591.63641"	"1772.89469"	"1772.89512"	"-0.24"	"-0.00014"	"15/128"	"15"	"128"	"1168353.546875"	"HCD"	"MS2"	"18.31433"	"16.0"	"100.000"	"75.8014"	"25792"	"25792"	"25771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.2"	""	"18.5"	""	"22.5"	""	"27.0"	""	"33.4"	"34.3"	""	"849"	"69"	"36.000"	"29.000"	"5.19849576588012E-06"	"26"	"0"	"1.113E-07"	"1.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAEETWMVIHGR"	"[R].nTAEETWMVIHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"591.63647"	"1772.89487"	"1772.89512"	"-0.14"	"-0.00008"	"15/128"	"15"	"128"	"931788.557617188"	"HCD"	"MS2"	"16.62672"	"17.2"	"100.000"	"75.9938"	"25902"	"25902"	"25881"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"18.9"	""	"26.3"	""	"23.4"	""	"29.7"	"38.2"	""	"855"	"57"	"36.000"	"29.000"	"8.01560152198821E-05"	"22"	"0"	"7.764E-08"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAEETWMVIHGR"	"[R].nTAEETWMVIHGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"P04166"	"Cytochrome b5 type B OS=Rattus norvegicus OX=10116 GN=Cyb5b PE=1 SV=2"	"0"	"3"	"3"	"0.8837"	"0.0000"	"1"	"1"	"1"	"591.63696"	"1772.89634"	"1772.89512"	"0.69"	"0.00041"	"12/128"	"12"	"128"	"773616.774475098"	"HCD"	"MS2"	"4.915104"	"14.2"	"100.000"	"75.4974"	"25669"	"25669"	"25647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"17.9"	""	"21.4"	""	"28.6"	""	"28.7"	"24.9"	""	"854"	"43"	"36.000"	"29.000"	"0.00206266108470983"	"20"	"0"	"4.153E-06"	"0.938"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"591.67285"	"1773.00400"	"1773.00460"	"-0.34"	"-0.00020"	"11/92"	"11"	"92"	"556103.752624512"	"HCD"	"MS2"	"9.977175"	"20.1"	"100.000"	"104.7495"	"37477"	"37477"	"37463"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"21.4"	""	"24.5"	""	"33.9"	""	"48.9"	"33.7"	""	"1074"	"35"	"37.000"	"30.000"	"0.0167099167302593"	"18"	"0.0001991"	"0.002834"	"0.355"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"591.67291"	"1773.00418"	"1773.00460"	"-0.24"	"-0.00014"	"9/92"	"9"	"92"	"640704.98236084"	"HCD"	"MS2"	"5.452679"	"23.2"	"100.000"	"104.7183"	"37485"	"37485"	"37477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"28.4"	""	"24.6"	""	"40.3"	"0.9"	"49.9"	"47.3"	""	"1067"	"26"	"37.000"	"30.000"	"0.148639564346398"	"15"	"0.006157"	"0.07489"	"0.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"591.67303"	"1773.00455"	"1773.00460"	"-0.03"	"-0.00002"	"11/92"	"11"	"92"	"853901.650939941"	"HCD"	"MS2"	"16.65764"	"28.4"	"100.000"	"104.4388"	"37355"	"37355"	"37342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.9"	""	"27.4"	""	"32.4"	""	"52.4"	""	"66.7"	"48.6"	""	"1057"	"35"	"37.000"	"30.000"	"0.0160341149084667"	"21"	"0.0001991"	"0.004039"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"5"	"887.00598"	"1773.00469"	"1773.00460"	"0.05"	"0.00004"	"5/92"	"5"	"92"	"153963.955749512"	"HCD"	"MS2"	"18.97239"	"12.5"	"100.000"	"104.7276"	"37489"	"37489"	"37477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"11.0"	""	"20.9"	""	"24.9"	""	"26.2"	"20.0"	""	"1059"	"9"	"37.000"	"30.000"	"6.94809846530668"	"15"	"0.003661"	"0.03992"	"0.116"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"3"	"3"	"0.9737"	"0.0000"	"1"	"1"	"1"	"591.67310"	"1773.00473"	"1773.00460"	"0.07"	"0.00004"	"12/92"	"12"	"92"	"752174.82434082"	"HCD"	"MS2"	"9.623294"	"24.9"	"100.000"	"104.9942"	"37593"	"37593"	"37579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.9"	""	"27.1"	""	"31.7"	""	"44.5"	"1.0"	"54.3"	"41.5"	""	"1059"	"38"	"37.000"	"30.000"	"0.00760091654960761"	"16"	"0.001103"	"0.00912"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.00641"	"1773.00554"	"1773.00460"	"0.53"	"0.00047"	"10/92"	"10"	"92"	"164333.911804199"	"HCD"	"MS2"	"23.74131"	"13.9"	"100.000"	"104.4480"	"37359"	"37359"	"37342"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.7"	""	"15.4"	""	"19.1"	""	"24.4"	""	"27.9"	"26.2"	""	"1059"	"23"	"37.000"	"30.000"	"0.282400827160695"	"14"	"0.00307"	"0.03331"	"0.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTPEEEEILNK"	"[K].lTPEEEEILNk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"P62243"	"40S ribosomal protein S8 OS=Rattus norvegicus OX=10116 GN=Rps8 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"887.00677"	"1773.00627"	"1773.00460"	"0.94"	"0.00084"	"7/92"	"7"	"92"	"122103.252990723"	"HCD"	"MS2"	"24.71172"	"9.6"	"100.000"	"104.7217"	"37466"	"37466"	"37455"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"9.9"	""	"15.8"	""	"21.5"	""	"15.0"	"16.1"	""	"1014"	"4"	"37.000"	"30.000"	"20.3707941100412"	"13"	"0.005956"	"0.07277"	"0.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.43866"	"1773.87004"	"1773.87174"	"-0.96"	"-0.00085"	"4/140"	"4"	"140"	"122015.699035645"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"52.1156"	"16177"	"16177"	"16147"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.5"	""	"4.5"	""	"9.6"	""	"11.5"	""	"17.3"	"10.9"	""	"785"	"11"	"35.000"	"28.000"	"3.14658639879664"	"13"	"0.001615"	"0.01465"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.43964"	"1773.87200"	"1773.87174"	"0.14"	"0.00013"	"13/140"	"13"	"140"	"169365.296142578"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"51.7839"	"16042"	"16042"	"16022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.6"	""	"10.6"	""	"21.1"	""	"14.0"	""	"20.7"	"15.5"	""	"788"	"33"	"35.000"	"28.000"	"0.0221052902556794"	"15"	"9.9E-05"	"0.0004501"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTQINNSWGPEER"	"[R].nTQINNSWGPEER.[S]"	"N-Term(TMT6plex)"	"1"	"2"	"P47967"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2"	"P47967; P97840"	"Galectin-5 OS=Rattus norvegicus OX=10116 GN=Lgals5 PE=1 SV=2; Galectin-9 OS=Rattus norvegicus OX=10116 GN=Lgals9 PE=2 SV=2"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"887.44086"	"1773.87444"	"1773.87174"	"1.52"	"0.00135"	"8/140"	"8"	"140"	"275533.454650879"	"HCD"	"MS2"	"0"	"19.2"	"100.000"	"51.5375"	"15976"	"15976"	"15951"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"12.7"	""	"24.3"	""	"27.3"	""	"37.7"	"20.9"	""	"800"	"36"	"36.000"	"29.000"	"0.00981883566274012"	"19"	"0"	"7.041E-05"	"0.685"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.44574"	"1773.88420"	"1773.88566"	"-0.82"	"-0.00073"	"4/136"	"4"	"136"	"167305.295043945"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"87.1822"	"30422"	"30422"	"30406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"14.0"	""	"11.5"	""	"22.6"	""	"24.5"	"17.9"	""	"846"	"11"	"36.000"	"29.000"	"3.29868136751339"	"13"	"0.004213"	"0.04605"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"887.44611"	"1773.88494"	"1773.88566"	"-0.41"	"-0.00036"	"5/136"	"5"	"136"	"148895.421142578"	"HCD"	"MS2"	"14.50296"	"9.1"	"100.000"	"87.2245"	"30405"	"30405"	"30391"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.3"	""	"10.9"	""	"8.4"	""	"16.2"	""	"15.3"	"19.4"	""	"841"	"24"	"36.000"	"29.000"	"0.165869295522655"	"18"	"0.002189"	"0.02097"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.44623"	"1773.88518"	"1773.88566"	"-0.27"	"-0.00024"	"11/136"	"11"	"136"	"1066625.99481201"	"HCD"	"MS2"	"40.20337"	"45.1"	"100.000"	"87.4844"	"30544"	"30544"	"30530"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.7"	""	"50.8"	""	"58.8"	""	"78.0"	""	"81.6"	"98.6"	""	"844"	"56"	"36.000"	"29.000"	"0.000103112769323686"	"16"	"0"	"2.796E-07"	"1.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"591.96661"	"1773.88529"	"1773.88566"	"-0.21"	"-0.00012"	"13/136"	"13"	"136"	"833554.801696777"	"HCD"	"MS2"	"23.42678"	"18.3"	"100.000"	"87.3921"	"30507"	"30507"	"30484"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"25.2"	""	"21.0"	""	"32.3"	""	"36.7"	"37.5"	""	"844"	"69"	"36.000"	"29.000"	"5.15599456589577E-06"	"17"	"0"	"2.531E-07"	"1.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"887.44653"	"1773.88579"	"1773.88566"	"0.07"	"0.00007"	"10/136"	"10"	"136"	"988689.577331543"	"HCD"	"MS2"	"43.16878"	"42.1"	"100.000"	"87.5268"	"30526"	"30526"	"30508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.6"	""	"53.7"	""	"45.7"	""	"73.3"	""	"86.7"	"84.2"	""	"834"	"47"	"36.000"	"29.000"	"0.000903932611709812"	"15"	"0"	"9.853E-07"	"1.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FQSTDVAEEVYTR"	"[R].fQSTDVAEEVYTR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"591.96692"	"1773.88620"	"1773.88566"	"0.31"	"0.00018"	"13/136"	"13"	"136"	"599988.047668457"	"HCD"	"MS2"	"9.906659"	"13.7"	"100.000"	"87.4691"	"30503"	"30503"	"30482"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"17.1"	""	"19.9"	""	"17.8"	"0.9"	"29.6"	"28.2"	""	"835"	"48"	"36.000"	"29.000"	"0.000728880748844311"	"20"	"0"	"8.557E-06"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANSEPVGTQTAK"	"[K].lANSEPVGTQTAk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"592.00745"	"1774.00779"	"1774.01108"	"-1.86"	"-0.00110"	"14/130"	"14"	"130"	"642076.08782959"	"HCD"	"MS2"	"7.229082"	"33.0"	"100.000"	"50.1437"	"15413"	"15413"	"15387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.2"	""	"32.2"	""	"39.0"	""	"59.8"	""	"76.0"	"65.5"	""	"1026"	"38"	"37.000"	"30.000"	"0.00891491825148429"	"17"	"0"	"9.628E-06"	"0.863"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LANSEPVGTQTAK"	"[K].lANSEPVGTQTAk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"D3ZHV2"	"Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus OX=10116 GN=Macf1 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"592.00812"	"1774.00980"	"1774.01108"	"-0.72"	"-0.00043"	"14/130"	"14"	"130"	"739225.953369141"	"HCD"	"MS2"	"24.20559"	"41.1"	"100.000"	"50.5290"	"15535"	"15535"	"15510"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.7"	""	"46.1"	""	"51.4"	""	"76.3"	""	"91.3"	"80.3"	""	"1009"	"36"	"37.000"	"30.000"	"0.0120742779910652"	"18"	"0"	"9.43E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEAPHIVVGTPGR"	"[K].lQAEAPHIVVGTPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"592.01031"	"1774.01639"	"1774.01728"	"-0.50"	"-0.00030"	"8/154"	"8"	"154"	"1175253.22625732"	"HCD"	"MS2"	"11.09414"	"18.8"	"100.000"	"71.0568"	"23899"	"23899"	"23879"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.8"	""	"20.5"	""	"23.8"	""	"29.7"	""	"37.9"	"35.4"	""	"963"	"50"	"36.000"	"29.000"	"0.000493851402490053"	"21"	"0"	"1.218E-07"	"1.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEAPHIVVGTPGR"	"[K].lQAEAPHIVVGTPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"592.01074"	"1774.01767"	"1774.01728"	"0.22"	"0.00013"	"15/154"	"15"	"154"	"1025132.25939941"	"HCD"	"MS2"	"6.061525"	"17.3"	"100.000"	"70.8890"	"23799"	"23799"	"23780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"22.3"	""	"28.7"	""	"31.8"	""	"30.5"	"28.8"	""	"953"	"38"	"36.000"	"29.000"	"0.00769241852327821"	"19"	"0"	"1.634E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEAPHIVVGTPGR"	"[K].lQAEAPHIVVGTPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.01129"	"1774.01932"	"1774.01728"	"1.15"	"0.00068"	"13/154"	"13"	"154"	"1162328.7835083"	"HCD"	"MS2"	"11.0327"	"23.5"	"100.000"	"70.7502"	"23776"	"23776"	"23757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.3"	""	"28.5"	""	"32.1"	""	"40.4"	""	"43.3"	"40.8"	""	"959"	"35"	"36.000"	"29.000"	"0.0152331111687657"	"15"	"0"	"2.464E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQAEAPHIVVGTPGR"	"[K].lQAEAPHIVVGTPGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"Q5RKI1"	"Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"592.01184"	"1774.02097"	"1774.01728"	"2.08"	"0.00123"	"15/154"	"15"	"154"	"1301036.05432129"	"HCD"	"MS2"	"28.20504"	"25.5"	"100.000"	"70.5941"	"23680"	"23680"	"23654"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.6"	""	"32.5"	""	"30.5"	""	"47.9"	""	"48.1"	"41.8"	""	"945"	"41"	"36.000"	"29.000"	"0.00412478971563382"	"19"	"0"	"1.667E-06"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVYSFDPVGSYQR"	"[K].gAVYSFDPVGSYQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"887.95020"	"1774.89311"	"1774.89616"	"-1.72"	"-0.00153"	"7/118"	"7"	"118"	"151859.079833984"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"96.1517"	"34007"	"34007"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"11.6"	""	"11.5"	""	"14.9"	""	"12.0"	"12.0"	""	"866"	"42"	"36.000"	"29.000"	"0.00252050693294787"	"22"	"0"	"0.0001189"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVYSFDPVGSYQR"	"[K].gAVYSFDPVGSYQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"887.95056"	"1774.89385"	"1774.89616"	"-1.31"	"-0.00116"	"4/118"	"4"	"118"	"89912.6116333008"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"96.5070"	"34182"	"34182"	"34162"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.4"	""	"8.8"	""	"2.2"	""	"8.6"	""	"6.7"	"10.2"	""	"867"	"3"	"36.000"	"29.000"	"23.3339950720811"	"14"	"0.003317"	"0.03629"	"0.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVYSFDPVGSYQR"	"[K].gAVYSFDPVGSYQR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"887.95074"	"1774.89421"	"1774.89616"	"-1.10"	"-0.00098"	"6/118"	"6"	"118"	"124775.124145508"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"96.1906"	"34055"	"34055"	"34038"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.7"	""	"10.8"	""	"10.8"	""	"8.6"	""	"14.9"	"16.0"	""	"868"	"23"	"36.000"	"29.000"	"0.215025382809279"	"17"	"9.9E-05"	"0.0009128"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGTGSLAAAVETASGR"	"[R].tPGTGSLAAAVETASGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.32147"	"1774.94986"	"1774.94966"	"0.12"	"0.00007"	"18/156"	"18"	"156"	"1844475.4519043"	"HCD"	"MS2"	"52.21315"	"42.1"	"100.000"	"91.4246"	"32131"	"32131"	"32109"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"42.9"	""	"49.9"	""	"57.3"	"0.9"	"90.3"	"82.8"	""	"1073"	"35"	"37.000"	"30.000"	"0.0159429882602745"	"15"	"0"	"1.663E-06"	"1.02"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGTGSLAAAVETASGR"	"[R].tPGTGSLAAAVETASGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"592.32233"	"1774.95243"	"1774.94966"	"1.56"	"0.00092"	"17/156"	"17"	"156"	"2008990.88592529"	"HCD"	"MS2"	"48.52754"	"55.4"	"100.000"	"91.4946"	"32123"	"32123"	"32105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.1"	""	"63.3"	""	"58.3"	""	"78.1"	""	"113.3"	"115.1"	""	"1080"	"34"	"37.000"	"30.000"	"0.0216468027518744"	"16"	"0"	"3.333E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPGTGSLAAAVETASGR"	"[R].tPGTGSLAAAVETASGR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"Q8VD52"	"Pyridoxal phosphate phosphatase OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2"	"0"	"2"	"2"	"0.3333"	"0.0000"	"1"	"1"	"1"	"887.98102"	"1774.95476"	"1774.94966"	"2.87"	"0.00255"	"4/156"	"4"	"156"	"76929.5464477539"	"HCD"	"MS2"	"10.89932"	"5.1"	"100.000"	"91.6238"	"32176"	"32176"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"4.8"	""	"6.3"	""	"11.3"	""	"5.6"	"9.9"	""	"1079"	"3"	"37.000"	"30.000"	"25.8220934808063"	"15"	"0.005589"	"0.07042"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TADQQYMEGFK"	"[K].tADQQYMEGFk.[Y]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"Q63692"	"Hsp90 co-chaperone Cdc37 OS=Rattus norvegicus OX=10116 GN=Cdc37 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"888.45514"	"1775.90300"	"1775.90384"	"-0.47"	"-0.00042"	"4/108"	"4"	"108"	"125688.928161621"	"HCD"	"MS2"	"0"	"11.6"	"100.000"	"82.2128"	"28420"	"28420"	"28398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.4"	""	"18.0"	""	"17.7"	""	"13.8"	""	"17.9"	"23.0"	""	"972"	"8"	"36.000"	"29.000"	"8.44571202772197"	"13"	"0.007752"	"0.0992"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MPEDESTPEKR"	"[K].mPEDESTPEkR.[T]"	"N-Term(TMT6plex); K10(TMT6plex)"	"1"	"3"	"P62749"	"Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"Q5PQN0; P84076; P62749"	"Neurocalcin-delta OS=Rattus norvegicus OX=10116 GN=Ncald PE=1 SV=3; Neuron-specific calcium-binding protein hippocalcin OS=Rattus norvegicus OX=10116 GN=Hpca PE=1 SV=2; Hippocalcin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Hpcal1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"592.97839"	"1776.92063"	"1776.92022"	"0.23"	"0.00014"	"12/94"	"12"	"94"	"1322336.26953125"	"HCD"	"MS2"	"38.67877"	"61.3"	"100.000"	"36.3832"	"9831"	"9831"	"9814"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.6"	""	"66.4"	""	"82.1"	""	"89.3"	"0.4"	"128.9"	"120.6"	""	"1023"	"9"	"37.000"	"30.000"	"6.69646553614197"	"13"	"0.0001991"	"0.003206"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.96436"	"1778.92143"	"1778.92344"	"-1.13"	"-0.00100"	"8/144"	"8"	"144"	"150636.444824219"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"74.6317"	"25349"	"25349"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"11.5"	""	"18.3"	""	"13.4"	""	"14.5"	"15.1"	""	"988"	"45"	"36.000"	"29.000"	"0.0014815862843799"	"15"	"0"	"3.376E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.96509"	"1778.92290"	"1778.92344"	"-0.31"	"-0.00027"	"8/144"	"8"	"144"	"139841.813659668"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"75.2520"	"25600"	"25600"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"13.7"	""	"12.9"	""	"18.2"	""	"16.7"	"13.2"	""	"994"	"48"	"36.000"	"29.000"	"0.000740212455622325"	"16"	"0"	"1.314E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"889.96527"	"1778.92327"	"1778.92344"	"-0.10"	"-0.00009"	"10/144"	"10"	"144"	"273999.944580078"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"75.0389"	"25482"	"25482"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.3"	""	"19.9"	""	"22.5"	""	"21.4"	""	"25.2"	"26.1"	""	"999"	"77"	"36.000"	"29.000"	"1.05812138705663E-06"	"17"	"0"	"1.522E-07"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"889.96527"	"1778.92327"	"1778.92344"	"-0.10"	"-0.00009"	"13/144"	"13"	"144"	"987753.651428223"	"HCD"	"MS2"	"0"	"50.3"	"100.000"	"74.9453"	"25475"	"25475"	"25459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.6"	""	"65.7"	""	"70.9"	""	"80.7"	"2.7"	"90.3"	"86.5"	""	"999"	"92"	"36.000"	"29.000"	"3.30016377279794E-08"	"22"	"0"	"6.359E-10"	"1.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9844"	"0.0000"	"1"	"1"	"1"	"593.64600"	"1778.92344"	"1778.92344"	"0.00"	"0.00000"	"17/144"	"17"	"144"	"1149100.9274292"	"HCD"	"MS2"	"10.75199"	"14.5"	"100.000"	"75.1689"	"25566"	"25566"	"25550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"18.5"	""	"16.9"	""	"26.4"	""	"27.2"	"29.8"	""	"1001"	"64"	"36.000"	"30.000"	"2.21515480367495E-05"	"18"	"0"	"1.641E-07"	"1.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"0.9560"	"0.0000"	"1"	"1"	"1"	"889.96539"	"1778.92351"	"1778.92344"	"0.04"	"0.00003"	"13/144"	"13"	"144"	"914761.022583008"	"HCD"	"MS2"	"0"	"48.6"	"100.000"	"74.7184"	"25352"	"25352"	"25336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.4"	""	"70.7"	""	"75.4"	""	"74.3"	"1.3"	"84.2"	"84.2"	""	"999"	"91"	"36.000"	"29.000"	"4.36049198509861E-08"	"22"	"0"	"1.091E-10"	"1.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9718"	"0.0000"	"1"	"1"	"1"	"593.64624"	"1778.92417"	"1778.92344"	"0.41"	"0.00024"	"13/144"	"13"	"144"	"1411359.23571777"	"HCD"	"MS2"	"7.957351"	"18.9"	"100.000"	"74.9997"	"25466"	"25466"	"25446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.5"	""	"24.2"	""	"25.4"	""	"29.7"	""	"38.0"	"33.3"	""	"1012"	"71"	"37.000"	"30.000"	"3.93686494826141E-06"	"19"	"0"	"1.107E-06"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9841"	"0.0000"	"1"	"1"	"1"	"593.64642"	"1778.92472"	"1778.92344"	"0.72"	"0.00042"	"13/144"	"13"	"144"	"2253566.29699707"	"HCD"	"MS2"	"4.897426"	"25.0"	"100.000"	"74.6794"	"25337"	"25337"	"25325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"30.0"	""	"34.8"	""	"43.0"	"0.8"	"45.9"	"44.9"	""	"1049"	"63"	"37.000"	"30.000"	"2.48739921268998E-05"	"17"	"0"	"1.519E-07"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASGFNATEDAQVLR"	"[K].aASGFNATEDAQVLR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"3"	"3"	"0.9589"	"0.0000"	"1"	"1"	"1"	"593.64673"	"1778.92563"	"1778.92344"	"1.23"	"0.00073"	"14/144"	"14"	"144"	"3063893.63604736"	"HCD"	"MS2"	"8.099622"	"26.3"	"100.000"	"74.8765"	"25447"	"25447"	"25430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.5"	""	"37.3"	""	"36.4"	""	"42.3"	"1.5"	"47.1"	"44.5"	""	"1061"	"73"	"37.000"	"30.000"	"2.73328795950622E-06"	"20"	"0"	"2.512E-09"	"1.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMmmAAR.[Q]"	"N-Term(TMT6plex); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"890.44049"	"1779.87370"	"1779.87531"	"-0.90"	"-0.00080"	"10/120"	"10"	"120"	"134141.410766602"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"51.9612"	"16114"	"16114"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"8.0"	""	"8.4"	""	"19.1"	""	"14.3"	"10.9"	""	"709"	"10"	"35.000"	"28.000"	"3.39325298274022"	"16"	"0.002189"	"0.02063"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmMmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"2"	"2"	"890.44049"	"1779.87370"	"1779.87531"	"-0.90"	"-0.00080"	"10/120"	"10"	"120"	"134141.410766602"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"51.9612"	"16114"	"16114"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"8.0"	""	"8.4"	""	"19.1"	""	"14.3"	"10.9"	""	"709"	"10"	"35.000"	"28.000"	"3.39325298274022"	"16"	"0.002189"	"0.02063"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmmMAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M10(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"3"	"3"	"890.44049"	"1779.87370"	"1779.87531"	"-0.90"	"-0.00080"	"10/120"	"10"	"120"	"134141.410766602"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"51.9612"	"16114"	"16114"	"16084"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"8.0"	""	"8.4"	""	"19.1"	""	"14.3"	"10.9"	""	"709"	"10"	"35.000"	"28.000"	"3.39325298274022"	"16"	"0.002189"	"0.02063"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPMmmAAR.[Q]"	"N-Term(TMT6plex); M10(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.44128"	"1779.87529"	"1779.87531"	"-0.01"	"-0.00001"	"7/120"	"7"	"120"	"130984.46307373"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"51.6254"	"16012"	"16012"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"4.7"	""	"8.8"	""	"25.4"	""	"13.5"	"11.8"	""	"719"	"12"	"35.000"	"28.000"	"2.39717033532297"	"13"	"9.9E-05"	"0.0009225"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmMmAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M11(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"2"	"2"	"890.44128"	"1779.87529"	"1779.87531"	"-0.01"	"-0.00001"	"7/120"	"7"	"120"	"130984.46307373"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"51.6254"	"16012"	"16012"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"4.7"	""	"8.8"	""	"25.4"	""	"13.5"	"11.8"	""	"719"	"12"	"35.000"	"28.000"	"2.39717033532297"	"13"	"9.9E-05"	"0.0009225"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGEVINQPMMMAAR"	"[K].aGEVINQPmmMAAR.[Q]"	"N-Term(TMT6plex); M9(Oxidation); M10(Oxidation)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"3"	"3"	"890.44128"	"1779.87529"	"1779.87531"	"-0.01"	"-0.00001"	"7/120"	"7"	"120"	"130984.46307373"	"HCD"	"MS2"	"0"	"7.4"	"100.000"	"51.6254"	"16012"	"16012"	"15983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"4.7"	""	"8.8"	""	"25.4"	""	"13.5"	"11.8"	""	"719"	"12"	"35.000"	"28.000"	"2.39717033532297"	"13"	"9.9E-05"	"0.0009225"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLIANATNPESK"	"[K].yLIAnATNPESk.[V]"	"N-Term(TMT6plex); N5(Deamidated); K12(TMT6plex)"	"1"	"1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"P68255"	"14-3-3 protein theta OS=Rattus norvegicus OX=10116 GN=Ywhaq PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.49799"	"1779.98870"	"1779.98929"	"-0.33"	"-0.00030"	"3/110"	"3"	"110"	"69808.245300293"	"HCD"	"MS2"	"0"	"4.1"	"100.000"	"85.7383"	"29842"	"29842"	"29818"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.8"	""	"3.9"	""	"6.6"	""	"7.5"	""	"9.4"	"8.2"	""	"1060"	"7"	"37.000"	"30.000"	"10.263036408917"	"13"	"0.005426"	"0.06864"	"0.065"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMNPEYDYLFK"	"[M].sSmNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"890.91809"	"1780.82891"	"1780.83012"	"-0.68"	"-0.00061"	"7/118"	"7"	"118"	"171909.677185059"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"112.5599"	"40561"	"40561"	"40543"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.0"	""	"8.1"	""	"10.1"	""	"29.3"	""	"14.5"	"16.8"	""	"441"	"39"	"33.000"	"26.000"	"0.00250269884855745"	"16"	"0.0005161"	"0.006687"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSMNPEYDYLFK"	"[M].sSmNPEYDYLFk.[L]"	"N-Term(Prot)(Acetyl); M3(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"Q6NYB7"	"Ras-related protein Rab-1A OS=Rattus norvegicus OX=10116 GN=Rab1A PE=1 SV=3"	"0"	"2"	"2"	"0.9362"	"0.0000"	"1"	"1"	"1"	"890.91901"	"1780.83074"	"1780.83012"	"0.35"	"0.00031"	"7/118"	"7"	"118"	"308467.428527832"	"HCD"	"MS2"	"5.671409"	"14.0"	"100.000"	"112.4790"	"40515"	"40515"	"40489"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"16.1"	""	"13.0"	""	"36.5"	""	"25.2"	"31.5"	""	"458"	"47"	"33.000"	"26.000"	"0.000418634949496688"	"19"	"0.0001991"	"0.001996"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGDTGMLPANYVEAI"	"[R].tGDTGMLPANYVEAI.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"890.95337"	"1780.89946"	"1780.89887"	"0.33"	"0.00030"	"5/136"	"5"	"136"	"76731.4615478516"	"HCD"	"MS2"	"0"	"1.6"	"100.000"	"113.5977"	"40962"	"40962"	"40937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.6"	""	"2.7"	""	"2.9"	""	"3.5"	""	""	"3.6"	""	"948"	"19"	"36.000"	"29.000"	"0.540478399303994"	"14"	"0.003529"	"0.03929"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"594.31342"	"1780.92569"	"1780.92786"	"-1.22"	"-0.00072"	"15/134"	"15"	"134"	"1360342.50390625"	"HCD"	"MS2"	"21.00274"	"14.9"	"100.000"	"97.2438"	"34479"	"34479"	"34458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.1"	""	"22.9"	""	"16.0"	""	"23.1"	""	"30.6"	"29.3"	""	"1047"	"52"	"37.000"	"30.000"	"0.000296426267811526"	"18"	"0"	"1.751E-07"	"1.221"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9773"	"0.0000"	"1"	"1"	"1"	"890.96655"	"1780.92583"	"1780.92786"	"-1.14"	"-0.00101"	"8/134"	"8"	"134"	"214464.248046875"	"HCD"	"MS2"	"0"	"12.5"	"100.000"	"97.0611"	"34375"	"34375"	"34349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"19.2"	""	"21.5"	""	"13.1"	""	"18.2"	"19.4"	""	"1047"	"44"	"37.000"	"30.000"	"0.00192272284310747"	"16"	"0"	"2.932E-06"	"0.969"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"594.31372"	"1780.92661"	"1780.92786"	"-0.70"	"-0.00042"	"11/134"	"11"	"134"	"461286.243347168"	"HCD"	"MS2"	"29.99594"	"12.1"	"100.000"	"97.5600"	"34607"	"34607"	"34584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.0"	""	"13.1"	""	"16.3"	""	"22.7"	""	"23.0"	"20.0"	""	"1061"	"18"	"37.000"	"30.000"	"0.838852084832939"	"14"	"0"	"3.638E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8947"	"0.0000"	"1"	"1"	"1"	"890.96771"	"1780.92815"	"1780.92786"	"0.16"	"0.00014"	"10/134"	"10"	"134"	"611001.972717285"	"HCD"	"MS2"	"0"	"32.4"	"100.000"	"97.4054"	"34545"	"34545"	"34528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"52.1"	""	"48.3"	""	"43.0"	""	"53.1"	"50.1"	""	"1053"	"76"	"37.000"	"30.000"	"1.31946652172141E-06"	"25"	"0"	"2.147E-07"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.31427"	"1780.92826"	"1780.92786"	"0.22"	"0.00013"	"12/134"	"12"	"134"	"472757.140380859"	"HCD"	"MS2"	"18.98677"	"10.9"	"100.000"	"97.4419"	"34528"	"34528"	"34510"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"15.8"	""	"14.5"	""	"15.4"	""	"22.5"	"22.1"	""	"1053"	"44"	"37.000"	"30.000"	"0.0020912135079566"	"15"	"0"	"7.819E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.8919"	"0.0000"	"1"	"1"	"1"	"890.96777"	"1780.92827"	"1780.92786"	"0.23"	"0.00021"	"8/134"	"8"	"134"	"164826.713806152"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"97.1122"	"34426"	"34426"	"34404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"14.8"	""	"15.6"	""	"9.9"	"1.9"	"13.9"	"12.9"	""	"1053"	"37"	"37.000"	"30.000"	"0.0112304814677167"	"19"	"0"	"5.094E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"890.96790"	"1780.92851"	"1780.92786"	"0.37"	"0.00033"	"13/134"	"13"	"134"	"606349.507141113"	"HCD"	"MS2"	"0"	"30.7"	"100.000"	"97.3428"	"34489"	"34489"	"34478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.2"	""	"47.0"	""	"54.1"	""	"34.1"	""	"46.5"	"44.7"	""	"1049"	"63"	"37.000"	"30.000"	"2.81673177196197E-05"	"22"	"0"	"3.961E-07"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLEVTAYSPLGSSDR"	"[R].gLEVTAYSPLGSSDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"P51635"	"Aldo-keto reductase family 1 member A1 OS=Rattus norvegicus OX=10116 GN=Akr1a1 PE=1 SV=2"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"594.31451"	"1780.92899"	"1780.92786"	"0.63"	"0.00038"	"14/134"	"14"	"134"	"1067901.93267822"	"HCD"	"MS2"	"23.50763"	"13.4"	"100.000"	"97.1280"	"34402"	"34402"	"34377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"13.9"	""	"21.2"	""	"22.1"	""	"24.6"	"26.7"	""	"1082"	"47"	"37.000"	"30.000"	"0.00110458022806621"	"18"	"0"	"1.523E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.2000"	"0.0000"	"1"	"1"	"1"	"890.98224"	"1780.95720"	"1780.95805"	"-0.47"	"-0.00042"	"8/102"	"8"	"102"	"142444.209960938"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"68.1291"	"22678"	"22678"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.2"	""	"5.5"	""	"7.9"	""	"23.3"	""	"29.4"	"28.2"	""	"1116"	"10"	"37.000"	"30.000"	"5.14794856352358"	"21"	"0.004213"	"0.04619"	"0.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7246"	"0.0000"	"1"	"1"	"1"	"890.98248"	"1780.95769"	"1780.95805"	"-0.20"	"-0.00018"	"10/102"	"10"	"102"	"261159.873779297"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"68.0428"	"22675"	"22675"	"22657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.1"	""	"17.4"	""	"17.0"	""	"57.2"	""	"69.4"	"72.4"	""	"1116"	"69"	"37.000"	"30.000"	"6.52580660189089E-06"	""	"0"	"2.083E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLSEDTTEETLK"	"[K].gLSEDTTEETLk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"P13383"	"Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3"	"0"	"2"	"2"	"0.7209"	"0.0000"	"1"	"1"	"1"	"890.98309"	"1780.95891"	"1780.95805"	"0.49"	"0.00043"	"8/102"	"8"	"102"	"171385.08215332"	"HCD"	"MS2"	"0"	"17.0"	"100.000"	"67.7721"	"22534"	"22534"	"22513"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"17.6"	""	"17.4"	""	"33.9"	""	"42.8"	"37.5"	""	"1116"	"43"	"37.000"	"30.000"	"0.00290157766065702"	"27"	"0.0001991"	"0.002502"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAPDVVVPTLDTVR"	"[K].vAAPDVVVPTLDTVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"891.02081"	"1781.03435"	"1781.03702"	"-1.50"	"-0.00133"	"6/128"	"6"	"128"	"185371.30291748"	"HCD"	"MS2"	"12.98537"	"7.2"	"100.000"	"110.4940"	"39721"	"39721"	"39692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.7"	""	"7.8"	""	"6.8"	""	"13.2"	""	"13.5"	"21.3"	""	"810"	"39"	"36.000"	"29.000"	"0.00525357604748502"	"17"	"0"	"0.0003824"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAPDVVVPTLDTVR"	"[K].vAAPDVVVPTLDTVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"594.34991"	"1781.03519"	"1781.03702"	"-1.02"	"-0.00061"	"15/128"	"15"	"128"	"881581.341796875"	"HCD"	"MS2"	"14.13026"	"10.4"	"100.000"	"110.4780"	"39714"	"39714"	"39692"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"15.8"	""	"13.5"	""	"17.4"	""	"18.2"	"24.0"	""	"799"	"52"	"36.000"	"29.000"	"0.000248037179174911"	"21"	"0"	"2.431E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAPDVVVPTLDTVR"	"[K].vAAPDVVVPTLDTVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.02124"	"1781.03520"	"1781.03702"	"-1.02"	"-0.00091"	"12/128"	"12"	"128"	"213439.661499023"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"110.3622"	"39654"	"39654"	"39623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"11.6"	""	"6.7"	""	"15.1"	""	"14.9"	"16.6"	""	"799"	"30"	"36.000"	"29.000"	"0.036017766947358"	"14"	"9.9E-05"	"0.0009135"	"0.456"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAAPDVVVPTLDTVR"	"[K].vAAPDVVVPTLDTVR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"P38650"	"Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Dync1h1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.35052"	"1781.03702"	"1781.03702"	"0.00"	"0.00000"	"15/128"	"15"	"128"	"1342102.66687012"	"HCD"	"MS2"	"34.54531"	"14.3"	"100.000"	"110.3416"	"39645"	"39645"	"39623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"16.5"	""	"17.9"	""	"19.4"	""	"26.0"	"38.0"	""	"781"	"48"	"35.000"	"28.000"	"0.000569666968637524"	"16"	"0"	"1.009E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"594.35669"	"1781.05552"	"1781.05731"	"-1.01"	"-0.00060"	"11/110"	"11"	"110"	"1658683.25488281"	"HCD"	"MS2"	"30.96069"	"37.9"	"100.000"	"99.6267"	"35441"	"35441"	"35428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.2"	""	"53.1"	""	"50.2"	""	"77.8"	""	"45.7"	"49.9"	""	"656"	"37"	"35.000"	"28.000"	"0.00648446041956691"	"22"	"0"	"6.052E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"891.03168"	"1781.05608"	"1781.05731"	"-0.69"	"-0.00061"	"20/110"	"20"	"110"	"2916118.80657959"	"HCD"	"MS2"	"0"	"157.8"	"100.000"	"99.9515"	"35572"	"35572"	"35558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"341.1"	""	"212.6"	""	"209.3"	""	"314.1"	""	"186.3"	"224.7"	""	"655"	"56"	"35.000"	"28.000"	"8.87587759444251E-05"	"18"	"0"	"3.439E-07"	"1.161"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.03174"	"1781.05620"	"1781.05731"	"-0.62"	"-0.00055"	"13/110"	"13"	"110"	"475296.225463867"	"HCD"	"MS2"	"0"	"32.6"	"100.000"	"99.6450"	"35448"	"35448"	"35428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.3"	""	"59.4"	""	"39.7"	""	"58.4"	""	"46.5"	"47.7"	""	"655"	"34"	"35.000"	"28.000"	"0.0132498604530913"	"15"	"0.0001686"	"0.001208"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9792"	"0.0000"	"1"	"1"	"1"	"891.03198"	"1781.05669"	"1781.05731"	"-0.35"	"-0.00031"	"15/110"	"15"	"110"	"392675.190368652"	"HCD"	"MS2"	"0"	"25.4"	"100.000"	"99.5768"	"35392"	"35392"	"35367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.8"	""	"42.3"	""	"31.2"	""	"50.7"	""	"28.5"	"31.5"	""	"621"	"48"	"34.000"	"27.000"	"0.000504732888660525"	"17"	"0"	"0.0002516"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"594.35718"	"1781.05698"	"1781.05731"	"-0.18"	"-0.00011"	"14/110"	"14"	"110"	"4036402.23620605"	"HCD"	"MS2"	"15.45203"	"83.3"	"100.000"	"99.5931"	"35399"	"35399"	"35383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"172.4"	""	"121.6"	""	"98.6"	""	"173.8"	""	"118.8"	"104.6"	""	"621"	"37"	"34.000"	"27.000"	"0.0057155970645611"	"22"	"0"	"9.974E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"594.35730"	"1781.05735"	"1781.05731"	"0.02"	"0.00001"	"12/110"	"12"	"110"	"1694938.49914551"	"HCD"	"MS2"	"21.14063"	"40.2"	"100.000"	"100.2166"	"35680"	"35680"	"35665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"67.3"	""	"56.7"	""	"56.0"	""	"72.7"	""	"61.8"	"65.7"	""	"622"	"46"	"34.000"	"27.000"	"0.00079755453535701"	"19"	"0"	"5.065E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.03241"	"1781.05754"	"1781.05731"	"0.13"	"0.00012"	"9/110"	"9"	"110"	"116873.504821777"	"HCD"	"MS2"	"7.935966"	"9.0"	"100.000"	"100.2997"	"35714"	"35714"	"35691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.0"	""	"14.1"	""	"9.2"	""	"16.1"	""	"12.4"	"15.9"	""	"622"	"18"	"34.000"	"27.000"	"0.514944458639023"	"14"	"0.0005778"	"0.00717"	"0.272"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.03241"	"1781.05754"	"1781.05731"	"0.13"	"0.00012"	"8/110"	"8"	"110"	"156800.172302246"	"HCD"	"MS2"	"34.08617"	"12.3"	"100.000"	"100.1901"	"35642"	"35642"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"16.5"	""	"16.1"	""	"24.8"	""	"20.9"	"20.0"	""	"622"	"8"	"34.000"	"27.000"	"4.72890281746806"	"13"	"0.002711"	"0.02875"	"0.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"2"	"2"	"0.9565"	"0.0000"	"1"	"1"	"1"	"891.03253"	"1781.05779"	"1781.05731"	"0.27"	"0.00024"	"10/110"	"10"	"110"	"3030584.11151123"	"HCD"	"MS2"	"0"	"168.9"	"100.000"	"99.8628"	"35509"	"35509"	"35492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"333.8"	""	"217.3"	""	"223.9"	""	"349.0"	"0.5"	"212.8"	"255.3"	""	"621"	"69"	"34.000"	"27.000"	"3.77625753200697E-06"	"20"	"0"	"1.282E-07"	"1.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"594.35822"	"1781.06009"	"1781.05731"	"1.56"	"0.00093"	"12/110"	"12"	"110"	"13644195.9055176"	"HCD"	"MS2"	"4.052371"	"153.0"	"60.070"	"99.9019"	"35525"	"35525"	"35508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"309.6"	""	"202.8"	""	"187.4"	""	"308.1"	"1.8"	"205.8"	"228.1"	""	"601"	"36"	"34.000"	"27.000"	"0.00689992668757765"	"21"	"0"	"1.911E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVLIK"	"[K].gDPIPNEQVLIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"P14046"	"Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"594.35822"	"1781.06009"	"1781.05731"	"1.56"	"0.00093"	"8/110"	"8"	"110"	"22840570.8721924"	"HCD"	"MS2"	"4.28314"	"248.2"	"59.108"	"99.9215"	"35560"	"35560"	"35542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"536.9"	""	"340.0"	""	"301.1"	""	"485.5"	"0.7"	"329.0"	"346.8"	""	"601"	"45"	"34.000"	"27.000"	"0.000854760562788098"	"26"	"0"	"7.456E-06"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMTVSSDQMAK"	"[K].ePMTVSSDQMAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"891.46191"	"1781.91655"	"1781.91778"	"-0.69"	"-0.00061"	"4/108"	"4"	"108"	"113609.623168945"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"62.3825"	"20347"	"20347"	"20317"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.0"	""	"3.9"	""	"5.3"	""	"2.7"	"1.4"	"6.5"	"52.0"	""	"1035"	"13"	"37.000"	"30.000"	"2.36543138125698"	"14"	"0.007831"	"0.1001"	"0.029"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPMTVSSDQMAK"	"[K].ePMTVSSDQMAk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"P14141"	"Carbonic anhydrase 3 OS=Rattus norvegicus OX=10116 GN=Ca3 PE=1 SV=3"	"0"	"2"	"2"	"0.9750"	"0.0000"	"1"	"1"	"1"	"891.46198"	"1781.91667"	"1781.91778"	"-0.62"	"-0.00055"	"6/108"	"6"	"108"	"149104.793334961"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"62.4018"	"20388"	"20388"	"20361"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.6"	""	"2.6"	""	"4.9"	""	"4.5"	""	"7.1"	"64.8"	""	"1039"	"40"	"37.000"	"30.000"	"0.00574891055776398"	"16"	"0.0001991"	"0.002797"	"0.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPRPPVTEVPYR"	"[R].lEPRPPVTEVPYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"594.67474"	"1782.00968"	"1782.01114"	"-0.82"	"-0.00049"	"7/128"	"7"	"128"	"3031330.49176025"	"HCD"	"MS2"	"4.241217"	"70.9"	"100.000"	"70.2640"	"23579"	"23579"	"23563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.5"	""	"82.0"	""	"95.7"	""	"110.6"	"0.1"	"154.4"	"131.5"	""	"958"	"6"	"36.000"	"29.000"	"12.6863156639261"	"16"	"0.00212"	"0.01956"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPRPPVTEVPYR"	"[R].lEPRPPVTEVPYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.67493"	"1782.01023"	"1782.01114"	"-0.51"	"-0.00030"	"7/128"	"7"	"128"	"1080316.20690918"	"HCD"	"MS2"	"11.88671"	"36.1"	"100.000"	"69.6676"	"23303"	"23303"	"23283"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"46.0"	""	"46.1"	""	"51.5"	""	"58.0"	"0.5"	"66.1"	"74.1"	""	"953"	"3"	"36.000"	"29.000"	"24.1581072492897"	"13"	"0.002189"	"0.02014"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPRPPVTEVPYR"	"[R].lEPRPPVTEVPYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.67529"	"1782.01133"	"1782.01114"	"0.11"	"0.00006"	"7/128"	"7"	"128"	"2176406.08673096"	"HCD"	"MS2"	"16.06685"	"52.4"	"100.000"	"69.9690"	"23460"	"23460"	"23435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"64.5"	""	"69.6"	""	"62.8"	""	"89.3"	"0.6"	"109.0"	"101.2"	""	"936"	"10"	"36.000"	"29.000"	"4.91185856609287"	"13"	"9.9E-05"	"0.0005908"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEPRPPVTEVPYR"	"[R].lEPRPPVTEVPYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"Q9QZR6"	"Septin-9 OS=Rattus norvegicus OX=10116 GN=Sept9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.67529"	"1782.01133"	"1782.01114"	"0.11"	"0.00006"	"7/128"	"7"	"128"	"2956791.50738525"	"HCD"	"MS2"	"10.23036"	"66.4"	"100.000"	"70.2854"	"23554"	"23554"	"23541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.6"	""	"76.9"	""	"89.9"	""	"110.1"	""	"130.7"	"136.7"	""	"936"	"24"	"36.000"	"29.000"	"0.201486453710121"	"14"	"0"	"7.902E-05"	"0.675"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAHGADELLK"	"[K].eLQAHGADELLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"594.67627"	"1782.01426"	"1782.01617"	"-1.07"	"-0.00064"	"14/122"	"14"	"122"	"2916735.8145752"	"HCD"	"MS2"	"7.961155"	"82.3"	"100.000"	"69.0661"	"23093"	"23093"	"23077"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.3"	""	"96.9"	""	"110.1"	""	"149.8"	""	"167.8"	"147.7"	""	"933"	"33"	"36.000"	"29.000"	"0.0259927151876745"	"18"	"0"	"3.381E-05"	"0.751"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAHGADELLK"	"[K].eLQAHGADELLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"594.67682"	"1782.01590"	"1782.01617"	"-0.15"	"-0.00009"	"9/122"	"9"	"122"	"1128449.56048584"	"HCD"	"MS2"	"3.560919"	"40.4"	"100.000"	"69.6558"	"23332"	"23332"	"23312"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.2"	""	"53.4"	""	"43.8"	""	"66.6"	""	"80.8"	"84.6"	""	"910"	"18"	"36.000"	"29.000"	"0.699860361337881"	"14"	"0"	"0.0003389"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAHGADELLK"	"[K].eLQAHGADELLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.8431"	"0.0000"	"1"	"1"	"1"	"594.67682"	"1782.01590"	"1782.01617"	"-0.15"	"-0.00009"	"16/122"	"16"	"122"	"4141053.67889404"	"HCD"	"MS2"	"18.31327"	"113.1"	"100.000"	"68.9728"	"23020"	"23020"	"23001"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"162.5"	""	"142.2"	""	"143.2"	""	"193.6"	"1.1"	"222.0"	"207.8"	""	"910"	"51"	"36.000"	"29.000"	"0.000371544978968159"	"23"	"0"	"8.931E-08"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAHGADELLK"	"[K].eLQAHGADELLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.7925"	"0.0000"	"1"	"1"	"1"	"594.67682"	"1782.01590"	"1782.01617"	"-0.15"	"-0.00009"	"18/122"	"18"	"122"	"6511896.77398682"	"HCD"	"MS2"	"4.454458"	"158.5"	"100.000"	"69.2694"	"23141"	"23141"	"23124"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"247.7"	""	"190.8"	""	"193.3"	""	"263.3"	"2.1"	"315.7"	"289.8"	""	"910"	"53"	"36.000"	"29.000"	"0.000250041097605219"	"27"	"0"	"9.595E-08"	"1.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQAHGADELLK"	"[K].eLQAHGADELLk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"P85970"	"Actin-related protein 2/3 complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Arpc2 PE=1 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"594.67700"	"1782.01645"	"1782.01617"	"0.16"	"0.00009"	"11/122"	"11"	"122"	"7419004.42126465"	"HCD"	"MS2"	"2.717899"	"175.2"	"100.000"	"69.3653"	"23214"	"23214"	"23196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"261.9"	""	"206.5"	""	"223.9"	""	"288.7"	""	"341.6"	"340.8"	""	"909"	"53"	"36.000"	"29.000"	"0.000230427276910853"	"25"	"0"	"7.439E-08"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9710"	"0.0000"	"1"	"1"	"1"	"594.97192"	"1782.90122"	"1782.90125"	"-0.02"	"-0.00001"	"16/118"	"16"	"118"	"3510070.01757813"	"HCD"	"MS2"	"6.577372"	"30.8"	"100.000"	"84.2764"	"29252"	"29252"	"29235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"37.7"	""	"41.0"	""	"49.8"	""	"66.0"	"59.5"	""	"988"	"69"	"36.000"	"29.000"	"6.45248418737129E-06"	"19"	"0"	"1.067E-07"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.97198"	"1782.90140"	"1782.90125"	"0.08"	"0.00005"	"16/118"	"16"	"118"	"1655851.94903564"	"HCD"	"MS2"	"18.12654"	"24.4"	"100.000"	"83.6238"	"28959"	"28959"	"28945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.3"	""	"36.6"	""	"36.2"	""	"37.2"	""	"51.0"	"44.5"	""	"997"	"41"	"36.000"	"29.000"	"0.00372104706067418"	"15"	"0"	"1.691E-06"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.97198"	"1782.90140"	"1782.90125"	"0.08"	"0.00005"	"15/118"	"15"	"118"	"2055695.2043457"	"HCD"	"MS2"	"0.8025773"	"21.0"	"100.000"	"84.1076"	"29183"	"29183"	"29171"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"29.5"	""	"25.4"	""	"39.1"	"0.7"	"36.1"	"44.1"	""	"997"	"17"	"36.000"	"29.000"	"1.0038415385564"	"14"	"0.0001686"	"0.001228"	"0.43"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.8986"	"0.0000"	"1"	"1"	"1"	"594.97198"	"1782.90140"	"1782.90125"	"0.08"	"0.00005"	"16/118"	"16"	"118"	"4464421.20593262"	"HCD"	"MS2"	"5.00522"	"33.9"	"100.000"	"84.2098"	"29196"	"29196"	"29178"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.6"	""	"43.0"	""	"50.3"	""	"57.9"	"2.9"	"71.3"	"54.1"	""	"997"	"69"	"36.000"	"29.000"	"6.2902102599345E-06"	"24"	"0"	"1.467E-07"	"1.237"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.95441"	"1782.90154"	"1782.90125"	"0.16"	"0.00014"	"5/118"	"5"	"118"	"77798.912109375"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"83.9712"	"29129"	"29129"	"29100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.7"	""	"4.2"	""	"5.9"	""	"4.1"	""	"7.2"	"7.0"	""	"996"	"24"	"36.000"	"29.000"	"0.206647113231913"	"14"	"0.001951"	"0.01684"	"0.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.97223"	"1782.90213"	"1782.90125"	"0.50"	"0.00029"	"14/118"	"14"	"118"	"2267516.07806396"	"HCD"	"MS2"	"40.26946"	"29.4"	"100.000"	"83.6714"	"29007"	"29007"	"28988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.7"	""	"44.6"	""	"38.8"	""	"50.2"	""	"53.3"	"57.4"	""	"998"	"54"	"36.000"	"29.000"	"0.00018797519569297"	"16"	"0"	"3.003E-07"	"1.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"594.97223"	"1782.90213"	"1782.90125"	"0.50"	"0.00029"	"17/118"	"17"	"118"	"9491305.28942871"	"HCD"	"MS2"	"3.511331"	"53.7"	"100.000"	"83.9147"	"29077"	"29077"	"29061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"80.3"	""	"66.6"	""	"71.8"	""	"94.6"	""	"96.7"	"98.5"	""	"998"	"68"	"36.000"	"29.000"	"7.50067841078919E-06"	"23"	"0"	"1.367E-07"	"1.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"594.97247"	"1782.90287"	"1782.90125"	"0.91"	"0.00054"	"15/118"	"15"	"118"	"9165106.83721924"	"HCD"	"MS2"	"0.3818943"	"57.3"	"100.000"	"83.9761"	"29131"	"29131"	"29114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.4"	""	"75.3"	""	"77.9"	""	"94.4"	""	"102.1"	"110.4"	""	"1017"	"53"	"37.000"	"30.000"	"0.00026686459353701"	"16"	"0"	"1.02E-06"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAYPGDVFYLHSR"	"[R].eAYPGDVFYLHSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"891.95508"	"1782.90288"	"1782.90125"	"0.91"	"0.00081"	"4/118"	"4"	"118"	"68281.0219726563"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"83.9030"	"29072"	"29072"	"29049"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.8"	""	"3.2"	""	"5.3"	""	"4.6"	""	"6.2"	"5.7"	""	"1016"	"2"	"37.000"	"30.000"	"32.9506292242505"	"13"	"0.008289"	"0.1056"	"0.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPIMPAPGQEETVR"	"[K].ePIMPAPGQEETVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"Q5XI07"	"Lipoma-preferred partner homolog OS=Rattus norvegicus OX=10116 GN=Lpp PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"3"	"891.96643"	"1782.92558"	"1782.92575"	"-0.09"	"-0.00008"	"4/136"	"4"	"136"	"77323.4270629883"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"67.0811"	"22254"	"22254"	"22224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.3"	""	"4.5"	""	""	""	"3.2"	""	"4.6"	"7.2"	""	"1066"	"1"	"37.000"	"30.000"	"47.1766620039835"	"13"	"0.006343"	"0.07877"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTEPLNLNPAK"	"[R].eVTEPLNLNPAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.02057"	"1783.03386"	"1783.03657"	"-1.52"	"-0.00135"	"5/104"	"5"	"104"	"69416.9701538086"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"92.0359"	"32379"	"32379"	"32358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.8"	""	"6.5"	""	"9.2"	""	"8.7"	""	"8.4"	"6.6"	""	"776"	"8"	"35.000"	"28.000"	"5.91332468473348"	"13"	"0.007912"	"0.1004"	"0.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTEPLNLNPAK"	"[R].eVTEPLNLNPAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"595.01624"	"1783.03415"	"1783.03657"	"-1.36"	"-0.00081"	"13/104"	"13"	"104"	"855995.517272949"	"HCD"	"MS2"	"32.75491"	"25.5"	"100.000"	"92.0636"	"32390"	"32390"	"32371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"38.4"	""	"37.6"	""	"42.6"	""	"40.0"	"47.6"	""	"764"	"36"	"35.000"	"28.000"	"0.0105211536467518"	"17"	"0"	"2.398E-05"	"0.781"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTEPLNLNPAK"	"[R].eVTEPLNLNPAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.02118"	"1783.03508"	"1783.03657"	"-0.83"	"-0.00074"	"7/104"	"7"	"104"	"102300.522644043"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"92.1196"	"32378"	"32378"	"32350"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.1"	""	"7.9"	""	"8.4"	""	"9.1"	""	"9.6"	"11.1"	""	"768"	"9"	"35.000"	"28.000"	"4.32843823171396"	"13"	"0.004959"	"0.06129"	"0.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVTEPLNLNPAK"	"[R].eVTEPLNLNPAk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"P69060"	"N-acylneuraminate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Cmas PE=2 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"595.01764"	"1783.03836"	"1783.03657"	"1.01"	"0.00060"	"11/104"	"11"	"104"	"874379.337463379"	"HCD"	"MS2"	"28.64572"	"25.3"	"100.000"	"92.1659"	"32396"	"32396"	"32379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.2"	""	"37.2"	""	"39.0"	""	"36.9"	""	"44.0"	"51.0"	""	"730"	"34"	"35.000"	"28.000"	"0.0149036576011433"	"21"	"0"	"4.851E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGTPAGEGSGSPPK"	"[R].sPGTPAGEGSGSPPk.[W]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"892.48309"	"1783.95891"	"1783.95905"	"-0.08"	"-0.00007"	"11/134"	"11"	"134"	"253331.153808594"	"HCD"	"MS2"	"0"	"15.8"	"100.000"	"35.6905"	"9552"	"9552"	"9528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"23.0"	""	"21.8"	""	"23.9"	""	"24.2"	"32.1"	""	"1015"	"78"	"37.000"	"30.000"	"8.67832772408321E-07"	"21"	"0"	"1.915E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPGTPAGEGSGSPPK"	"[R].sPGTPAGEGSGSPPk.[W]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"892.48376"	"1783.96025"	"1783.95905"	"0.68"	"0.00060"	"7/134"	"7"	"134"	"183961.974182129"	"HCD"	"MS2"	"0"	"12.3"	"100.000"	"35.7913"	"9556"	"9556"	"9532"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"15.8"	""	"16.2"	""	"19.6"	""	"24.2"	"20.1"	""	"1023"	"32"	"37.000"	"30.000"	"0.029843217083602"	"15"	"0.0001991"	"0.003181"	"0.344"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDEIEEHSIK"	"[R].iLDEIEEHSIk.[I]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"595.34467"	"1784.01944"	"1784.02059"	"-0.64"	"-0.00038"	"8/92"	"8"	"92"	"467514.50012207"	"HCD"	"MS2"	"21.85783"	"20.2"	"100.000"	"105.5801"	"37809"	"37809"	"37791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"21.3"	""	"30.0"	""	"35.6"	""	"39.1"	"41.6"	""	"823"	"31"	"36.000"	"29.000"	"0.0329131795935392"	"16"	"0"	"4.055E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNENHSGELWK"	"[K].lNENHSGELWk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.66119"	"1784.96903"	"1784.96955"	"-0.29"	"-0.00018"	"12/108"	"12"	"108"	"1555998.05401611"	"HCD"	"MS2"	"50.26699"	"73.3"	"100.000"	"63.5963"	"20841"	"20841"	"20821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.8"	""	"97.2"	""	"100.8"	""	"117.7"	""	"136.0"	"139.5"	""	"1016"	"28"	"37.000"	"30.000"	"0.0831502792885327"	"14"	"0"	"0.0001801"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LNENHSGELWK"	"[K].lNENHSGELWk.[G]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"Q99J82"	"Integrin-linked protein kinase OS=Rattus norvegicus OX=10116 GN=Ilk PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.66125"	"1784.96921"	"1784.96955"	"-0.19"	"-0.00011"	"12/108"	"12"	"108"	"1648833.07293701"	"HCD"	"MS2"	"51.40131"	"79.7"	"100.000"	"63.5789"	"20866"	"20866"	"20841"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.0"	""	"99.0"	""	"96.0"	""	"133.3"	""	"152.7"	"155.7"	""	"1014"	"24"	"37.000"	"30.000"	"0.192312697381657"	"14"	"0"	"0.0003775"	"0.535"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGPGAAAQIQEVK"	"[K].aSGPGAAAQIQEVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"P23562"	"Band 3 anion transport protein OS=Rattus norvegicus OX=10116 GN=Slc4a1 PE=1 SV=3"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"893.01733"	"1785.02739"	"1785.02707"	"0.18"	"0.00016"	"10/134"	"10"	"134"	"83145.7711791992"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"60.8722"	"19737"	"19737"	"19710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"8.9"	""	"3.7"	""	"15.0"	""	"13.6"	"13.4"	""	"718"	"39"	"35.000"	"28.000"	"0.00415044294946964"	""	"9.9E-05"	"0.0004273"	"0.524"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEQMNGPVTAGSR"	"[R].fYEQMNGPVTAGSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"595.96387"	"1785.87705"	"1785.87913"	"-1.17"	"-0.00070"	"11/144"	"11"	"144"	"305893.022033691"	"HCD"	"MS2"	"58.51189"	"18.5"	"100.000"	"76.7945"	"26197"	"26197"	"26168"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"19.2"	""	"21.6"	""	"28.0"	"1.5"	"57.5"	"26.6"	""	"744"	"12"	"35.000"	"28.000"	"2.19049839792279"	"17"	"0.0001686"	"0.001249"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYEQMNGPVTAGSR"	"[R].fYEQMNGPVTAGSR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"595.96497"	"1785.88034"	"1785.87913"	"0.68"	"0.00040"	"14/144"	"14"	"144"	"467600.917053223"	"HCD"	"MS2"	"23.5702"	"21.1"	"100.000"	"76.7613"	"26214"	"26214"	"26192"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"23.6"	""	"25.6"	""	"29.4"	""	"61.5"	"33.8"	""	"758"	"22"	"35.000"	"28.000"	"0.228896530533648"	"16"	"0"	"0.0001765"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VWPNVEADGSEPTR"	"[K].vWPNVEADGSEPTR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"O88763"	"Phosphatidylinositol 3-kinase catalytic subunit type 3 OS=Rattus norvegicus OX=10116 GN=Pik3c3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.45081"	"1785.89433"	"1785.89689"	"-1.43"	"-0.00128"	"5/138"	"5"	"138"	"72601.5205078125"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"80.5154"	"27704"	"27704"	"27673"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.4"	""	"2.7"	""	"3.7"	""	"3.7"	""	"7.2"	"3.6"	""	"838"	"7"	"36.000"	"29.000"	"7.67739742973538"	"13"	"0.002799"	"0.02964"	"0.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTADFYGQSPK"	"[R].dVTADFYGQSPk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"595.98541"	"1785.94168"	"1785.94234"	"-0.36"	"-0.00022"	"11/112"	"11"	"112"	"880287.885742188"	"HCD"	"MS2"	"24.48632"	"24.2"	"100.000"	"85.1329"	"29568"	"29568"	"29543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"40.4"	""	"39.1"	""	"37.5"	""	"38.1"	"36.7"	""	"1036"	"29"	"37.000"	"30.000"	"0.0662719515553598"	"15"	"0"	"2.888E-05"	"0.765"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTADFYGQSPK"	"[R].dVTADFYGQSPk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"893.47504"	"1785.94280"	"1785.94234"	"0.26"	"0.00023"	"6/112"	"6"	"112"	"66458.3944702148"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"85.1068"	"29587"	"29587"	"29561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.6"	""	"3.4"	""	"8.4"	""	"5.2"	""	"6.8"	"6.2"	""	"1024"	"9"	"37.000"	"30.000"	"6.02934258442653"	"14"	"0.002711"	"0.02899"	"0.145"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVTADFYGQSPK"	"[R].dVTADFYGQSPk.[C]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"Q9EPB1"	"Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"595.98615"	"1785.94388"	"1785.94234"	"0.87"	"0.00052"	"12/112"	"12"	"112"	"892061.707397461"	"HCD"	"MS2"	"32.96095"	"24.2"	"100.000"	"85.1483"	"29604"	"29604"	"29577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.8"	""	"41.0"	""	"33.6"	""	"38.5"	""	"39.6"	"33.1"	""	"1014"	"26"	"37.000"	"30.000"	"0.123597008491296"	"14"	"0"	"0.0002787"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPPGPVPVPSLPSER"	"[R].qPPGPVPVPSLPSER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.00665"	"1786.00541"	"1786.00605"	"-0.36"	"-0.00021"	"10/148"	"10"	"148"	"302189.323730469"	"HCD"	"MS2"	"12.35092"	"9.4"	"100.000"	"93.4891"	"32962"	"32962"	"32940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"12.5"	""	"19.9"	""	"13.1"	""	"15.6"	"18.0"	""	"971"	"16"	"36.000"	"29.000"	"1.17000908562734"	"14"	"0.0001686"	"0.001671"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPPGPVPVPSLPSER"	"[R].qPPGPVPVPSLPSER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"Q9Z272"	"ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"596.00684"	"1786.00595"	"1786.00605"	"-0.05"	"-0.00003"	"12/148"	"12"	"148"	"323629.668945313"	"HCD"	"MS2"	"3.538974"	"9.5"	"100.000"	"93.6789"	"33003"	"33003"	"32980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"8.3"	""	"25.9"	""	"16.6"	""	"14.4"	"12.7"	""	"973"	"28"	"36.000"	"29.000"	"0.0758722292625312"	"14"	"0"	"0.0001051"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"596.32721"	"1786.96708"	"1786.96995"	"-1.61"	"-0.00096"	"13/128"	"13"	"128"	"2897719.86340332"	"HCD"	"MS2"	"9.611407"	"102.1"	"100.000"	"56.6855"	"18031"	"18031"	"18020"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.3"	""	"127.8"	""	"132.0"	""	"149.3"	"2.2"	"199.6"	"193.6"	""	"1189"	"50"	"37.000"	"30.000"	"0.000566437319512061"	"24"	"0"	"1.279E-05"	"0.838"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"596.32751"	"1786.96799"	"1786.96995"	"-1.10"	"-0.00065"	"13/128"	"13"	"128"	"2297196.7925415"	"HCD"	"MS2"	"24.49269"	"71.0"	"100.000"	"56.3611"	"17936"	"17936"	"17923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.5"	""	"82.8"	""	"90.1"	""	"107.8"	""	"137.7"	"129.5"	""	"1176"	"41"	"37.000"	"30.000"	"0.00495880837565393"	"20"	"0"	"3.751E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.7442"	"0.0000"	"1"	"1"	"1"	"893.98785"	"1786.96843"	"1786.96995"	"-0.85"	"-0.00076"	"16/128"	"16"	"128"	"206295.268371582"	"HCD"	"MS2"	"0"	"16.9"	"100.000"	"56.5571"	"17981"	"17981"	"17963"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.5"	""	"15.4"	""	"22.6"	""	"30.0"	""	"33.6"	"25.1"	""	"1177"	"43"	"37.000"	"30.000"	"0.00263479279507789"	"26"	"0"	"7.118E-06"	"0.89"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"893.98792"	"1786.96855"	"1786.96995"	"-0.78"	"-0.00070"	"9/128"	"9"	"128"	"141577.896484375"	"HCD"	"MS2"	"100"	"14.4"	"100.000"	"56.8550"	"18100"	"18100"	"18081"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.8"	""	"17.0"	""	"20.0"	""	"24.5"	""	"26.6"	"23.8"	""	"1177"	"27"	"37.000"	"30.000"	"0.112913655388446"	"21"	"9.9E-05"	"0.0006101"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"0.9464"	"0.0000"	"1"	"1"	"1"	"893.98877"	"1786.97026"	"1786.96995"	"0.18"	"0.00016"	"9/128"	"9"	"128"	"214568.19140625"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"56.2624"	"17897"	"17897"	"17874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.6"	""	"24.5"	""	"25.5"	""	"26.2"	""	"26.2"	"31.4"	""	"1178"	"56"	"37.000"	"30.000"	"0.000150008301877259"	"19"	"0"	"6.669E-06"	"0.896"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNPALNDNLEK"	"[K].nSNPALNDNLEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"Q6MG61"	"Chloride intracellular channel protein 1 OS=Rattus norvegicus OX=10116 GN=Clic1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"893.99017"	"1786.97307"	"1786.96995"	"1.75"	"0.00156"	"9/128"	"9"	"128"	"157058.936950684"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"56.5695"	"18020"	"18020"	"17999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"22.3"	""	"22.4"	""	"24.5"	""	"26.0"	"30.1"	""	"1189"	"19"	"37.000"	"30.000"	"0.726359897968017"	"14"	"0.002166"	"0.01974"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEKDPR"	"[R].eLLTLDEkDPR.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"596.34851"	"1787.03098"	"1787.03149"	"-0.28"	"-0.00017"	"9/102"	"9"	"102"	"2588816.59210205"	"HCD"	"MS2"	"11.50651"	"106.9"	"100.000"	"79.8246"	"27450"	"27450"	"27429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"196.1"	""	"136.2"	""	"152.3"	""	"168.8"	"1.8"	"191.7"	"163.6"	""	"869"	"21"	"36.000"	"29.000"	"0.325829033954952"	"20"	"0.001615"	"0.0145"	"0.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEKDPR"	"[R].eLLTLDEkDPR.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"596.34857"	"1787.03116"	"1787.03149"	"-0.18"	"-0.00011"	"6/102"	"6"	"102"	"3067770.3729248"	"HCD"	"MS2"	"6.80079"	"131.9"	"100.000"	"80.0046"	"27496"	"27496"	"27478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"241.7"	"1.9"	"154.0"	""	"176.6"	""	"213.9"	"0.4"	"230.4"	"229.0"	""	"873"	"20"	"36.000"	"29.000"	"0.463430110717243"	"18"	"0.001718"	"0.01502"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEKDPR"	"[R].eLLTLDEkDPR.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"596.34857"	"1787.03116"	"1787.03149"	"-0.18"	"-0.00011"	"5/102"	"5"	"102"	"2361123.66131592"	"HCD"	"MS2"	"14.64488"	"98.7"	"100.000"	"79.7051"	"27374"	"27374"	"27353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"169.3"	""	"115.2"	""	"133.9"	""	"172.2"	"3.3"	"185.1"	"155.2"	""	"873"	"24"	"36.000"	"29.000"	"0.159582126539129"	"18"	"0.001261"	"0.01027"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELLTLDEKDPR"	"[R].eLLTLDEkDPR.[R]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"P29314"	"40S ribosomal protein S9 OS=Rattus norvegicus OX=10116 GN=Rps9 PE=1 SV=4"	"1"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"596.34906"	"1787.03263"	"1787.03149"	"0.64"	"0.00038"	"6/102"	"6"	"102"	"1860431.3961792"	"HCD"	"MS2"	"4.190347"	"82.1"	"100.000"	"80.2277"	"27614"	"27614"	"27600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"130.2"	""	"106.3"	""	"110.0"	""	"139.6"	""	"161.0"	"135.6"	""	"882"	"20"	"36.000"	"29.000"	"0.415373312066573"	"22"	"0.001453"	"0.01179"	"0.227"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"INVYYNEATGGK"	"[R].iNVYYnEATGGk.[Y]"	"N-Term(TMT6plex); N6(Deamidated); K12(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"894.48218"	"1787.95708"	"1787.95799"	"-0.51"	"-0.00045"	"6/112"	"6"	"112"	"60432.3692626953"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"84.3453"	"29280"	"29280"	"29251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"4.5"	""	"5.4"	""	"8.9"	""	"8.8"	"8.0"	""	"1222"	"11"	"37.000"	"30.000"	"5.43301883011207"	"14"	"0.001615"	"0.01491"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPDLVPMGDWTSR"	"[R].tSPDLVPMGDWTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"0.3500"	"0.0000"	"1"	"1"	"1"	"597.63629"	"1790.89432"	"1790.89445"	"-0.07"	"-0.00004"	"6/128"	"6"	"128"	"252391.592163086"	"HCD"	"MS2"	"3.06448"	"7.2"	"100.000"	"105.9455"	"37956"	"37956"	"37934"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"10.6"	""	"6.8"	""	"16.0"	""	"14.0"	"10.7"	""	"866"	"21"	"36.000"	"29.000"	"0.385911656211912"	"27"	"0.001261"	"0.01018"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPDLVPMGDWTSR"	"[R].tSPDLVPMGDWTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.95081"	"1790.89433"	"1790.89445"	"-0.06"	"-0.00006"	"6/128"	"6"	"128"	"67192.3121948242"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"106.1777"	"38045"	"38045"	"38034"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.2"	""	"2.2"	""	"3.1"	""	"1.9"	""	"4.9"	"9.8"	""	"866"	"15"	"36.000"	"29.000"	"1.23449090982919"	"13"	"0.001615"	"0.01392"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPDLVPMGDWTSR"	"[R].tSPDLVPMGDWTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.95081"	"1790.89433"	"1790.89445"	"-0.06"	"-0.00006"	"5/128"	"5"	"128"	"107183.841308594"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"105.8876"	"37933"	"37933"	"37910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.6"	""	"9.1"	""	"6.2"	""	"8.4"	""	"7.5"	"11.9"	""	"866"	"24"	"36.000"	"29.000"	"0.16962423278767"	"14"	"0.001103"	"0.009165"	"0.249"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPDLVPMGDWTSR"	"[R].tSPDLVPMGDWTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"3"	"3"	"0.6897"	"0.0000"	"1"	"1"	"1"	"597.63635"	"1790.89450"	"1790.89445"	"0.03"	"0.00002"	"9/128"	"9"	"128"	"263067.332702637"	"HCD"	"MS2"	"19.0111"	"5.5"	"100.000"	"106.2381"	"38090"	"38090"	"38078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"8.5"	""	"5.9"	""	"9.1"	""	"11.2"	"9.3"	""	"866"	"29"	"36.000"	"29.000"	"0.0504066570734743"	"24"	"0"	"5.035E-05"	"0.715"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPDLVPMGDWTSR"	"[R].tSPDLVPMGDWTSR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"895.95203"	"1790.89678"	"1790.89445"	"1.30"	"0.00116"	"8/128"	"8"	"128"	"104227.821411133"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"106.1612"	"38060"	"38060"	"38042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.8"	""	"5.6"	""	"4.9"	""	"4.7"	""	"11.6"	"7.5"	""	"868"	"26"	"36.000"	"29.000"	"0.109015871127516"	"18"	"0.0001991"	"0.005012"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"895.98230"	"1790.95732"	"1790.95983"	"-1.40"	"-0.00125"	"4/152"	"4"	"152"	"127707.292602539"	"HCD"	"MS2"	"100"	"7.3"	"100.000"	"57.2197"	"18249"	"18249"	"18227"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.2"	""	"14.6"	""	"8.6"	""	"11.0"	""	"15.3"	"11.9"	""	"1110"	"7"	"37.000"	"30.000"	"11.9479386277203"	"13"	"0.004234"	"0.04963"	"0.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.9400"	"0.0000"	"1"	"1"	"1"	"895.98291"	"1790.95854"	"1790.95983"	"-0.72"	"-0.00064"	"7/152"	"7"	"152"	"162711.884765625"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"57.5140"	"18368"	"18368"	"18346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"8.1"	""	"10.1"	""	"15.2"	""	"17.2"	"14.5"	""	"1102"	"50"	"37.000"	"30.000"	"0.00059040713718592"	"19"	"0"	"2.89E-06"	"0.97"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.8611"	"0.0000"	"1"	"1"	"1"	"895.98450"	"1790.96172"	"1790.95983"	"1.06"	"0.00094"	"7/152"	"7"	"152"	"110100.163085938"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"56.8951"	"18152"	"18152"	"18125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.7"	""	"4.9"	""	"7.5"	""	"9.2"	""	"7.2"	"8.6"	""	"1147"	"36"	"37.000"	"30.000"	"0.0133823819871815"	"20"	"0.001103"	"0.008996"	"0.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDNQVYVATASPAR"	"[R].aVDNQVYVATASPAR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"Q497B0"	"Omega-amidase NIT2 OS=Rattus norvegicus OX=10116 GN=Nit2 PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"895.98456"	"1790.96184"	"1790.95983"	"1.12"	"0.00101"	"6/152"	"6"	"152"	"144063.747131348"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"57.2353"	"18290"	"18290"	"18263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"8.5"	""	"12.5"	""	"12.4"	""	"15.1"	"13.8"	""	"1147"	"38"	"37.000"	"30.000"	"0.00965013574023913"	"21"	"0"	"0.0001731"	"0.605"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"597.67981"	"1791.02488"	"1791.02640"	"-0.85"	"-0.00051"	"13/114"	"13"	"114"	"584406.031677246"	"HCD"	"MS2"	"19.75749"	"24.9"	"100.000"	"86.2691"	"30025"	"30025"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"32.4"	""	"34.1"	""	"41.6"	""	"47.6"	"46.7"	""	"1058"	"31"	"37.000"	"30.000"	"0.0390351337738294"	"16"	"0"	"8.011E-06"	"0.879"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.01648"	"1791.02568"	"1791.02640"	"-0.40"	"-0.00036"	"14/114"	"14"	"114"	"254239.150817871"	"HCD"	"MS2"	"0"	"21.9"	"100.000"	"85.4097"	"29680"	"29680"	"29660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"36.2"	""	"26.9"	""	"37.3"	""	"32.9"	"48.3"	""	"1043"	"43"	"37.000"	"30.000"	"0.00264395654365258"	"15"	"0"	"1.207E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"597.68018"	"1791.02597"	"1791.02640"	"-0.24"	"-0.00014"	"9/114"	"9"	"114"	"9000000.41326904"	"HCD"	"MS2"	"3.442066"	"197.4"	"100.000"	"85.6514"	"29779"	"29779"	"29762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"271.9"	""	"270.0"	""	"257.0"	""	"295.1"	"0.8"	"313.8"	"462.2"	""	"1019"	"60"	"37.000"	"30.000"	"4.73308374064378E-05"	"20"	"0"	"1.512E-07"	"1.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"597.68018"	"1791.02597"	"1791.02640"	"-0.24"	"-0.00014"	"9/114"	"9"	"114"	"9144563.28637695"	"HCD"	"MS2"	"3.569249"	"194.5"	"100.000"	"85.6417"	"29803"	"29803"	"29789"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"278.8"	""	"246.3"	""	"261.6"	""	"296.4"	"0.1"	"317.9"	"442.1"	""	"1019"	"62"	"37.000"	"30.000"	"2.95899470727109E-05"	"21"	"0"	"1.601E-07"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"597.68024"	"1791.02616"	"1791.02640"	"-0.14"	"-0.00008"	"9/114"	"9"	"114"	"4201456.70056152"	"HCD"	"MS2"	"3.777688"	"100.8"	"100.000"	"85.9298"	"29920"	"29920"	"29903"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"129.7"	""	"128.9"	""	"120.1"	""	"156.7"	"0.7"	"170.9"	"249.8"	""	"1021"	"60"	"37.000"	"30.000"	"4.72058417795463E-05"	"21"	"0"	"2.852E-07"	"1.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.01685"	"1791.02641"	"1791.02640"	"0.01"	"0.00001"	"5/114"	"5"	"114"	"94235.5586547852"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"86.2806"	"30030"	"30030"	"30003"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.6"	""	"10.9"	""	"6.1"	""	"11.6"	""	"16.9"	"14.2"	""	"1021"	"16"	"37.000"	"30.000"	"1.42559363095166"	"13"	"0.0001991"	"0.003219"	"0.343"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9490"	"0.0000"	"1"	"1"	"1"	"896.01691"	"1791.02654"	"1791.02640"	"0.08"	"0.00007"	"13/114"	"13"	"114"	"1640356.82263184"	"HCD"	"MS2"	"0"	"120.5"	"100.000"	"85.6766"	"29788"	"29788"	"29778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"179.4"	""	"149.4"	""	"170.2"	""	"173.0"	""	"205.4"	"265.4"	""	"1021"	"98"	"37.000"	"30.000"	"7.96151552693163E-09"	"23"	"0"	"6.767E-10"	"1.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9425"	"0.0000"	"1"	"1"	"1"	"896.01697"	"1791.02666"	"1791.02640"	"0.14"	"0.00013"	"20/114"	"20"	"114"	"495753.42376709"	"HCD"	"MS2"	"0"	"43.9"	"100.000"	"85.9672"	"29905"	"29905"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.3"	""	"53.7"	""	"60.1"	""	"63.3"	"2.1"	"79.3"	"90.8"	""	"1021"	"87"	"37.000"	"30.000"	"1.0092430012771E-07"	"23"	"0"	"4.048E-09"	"1.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"597.68042"	"1791.02671"	"1791.02640"	"0.17"	"0.00010"	"9/114"	"9"	"114"	"3502657.44189453"	"HCD"	"MS2"	"4.960561"	"89.6"	"100.000"	"85.9602"	"29902"	"29902"	"29884"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"126.9"	""	"107.3"	""	"111.9"	""	"139.9"	""	"160.5"	"203.8"	""	"1015"	"60"	"37.000"	"30.000"	"4.76909580111553E-05"	"21"	"0"	"4.276E-08"	"1.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9545"	"0.0000"	"1"	"1"	"1"	"896.01709"	"1791.02690"	"1791.02640"	"0.28"	"0.00025"	"12/114"	"12"	"114"	"435924.342224121"	"HCD"	"MS2"	"0"	"34.5"	"100.000"	"85.9734"	"29937"	"29937"	"29919"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"42.7"	""	"43.9"	""	"53.2"	""	"62.0"	"85.8"	""	"1016"	"88"	"37.000"	"30.000"	"8.4696158397594E-08"	"22"	"0"	"7.75E-09"	"1.5"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9400"	"0.0000"	"1"	"1"	"1"	"597.68054"	"1791.02707"	"1791.02640"	"0.38"	"0.00022"	"14/114"	"14"	"114"	"1087516.26068115"	"HCD"	"MS2"	"40.04082"	"33.8"	"100.000"	"85.3498"	"29656"	"29656"	"29636"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.9"	""	"45.5"	""	"41.3"	""	"59.7"	"0.8"	"59.3"	"55.1"	""	"1017"	"50"	"37.000"	"30.000"	"0.000536155736814955"	"18"	"0"	"6.155E-07"	"1.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"597.68054"	"1791.02707"	"1791.02640"	"0.38"	"0.00022"	"13/114"	"13"	"114"	"1311264.18658447"	"HCD"	"MS2"	"30.63067"	"43.0"	"100.000"	"85.3650"	"29692"	"29692"	"29669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.0"	""	"58.6"	""	"55.0"	""	"70.2"	"0.8"	"64.0"	"89.0"	""	"1017"	"32"	"37.000"	"30.000"	"0.0323065778846612"	"15"	"0"	"4.129E-06"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.8621"	"0.0000"	"1"	"1"	"1"	"896.01740"	"1791.02751"	"1791.02640"	"0.62"	"0.00056"	"11/114"	"11"	"114"	"233115.859619141"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"85.3949"	"29704"	"29704"	"29683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"27.7"	""	"25.8"	""	"33.4"	""	"37.9"	"37.6"	""	"1013"	"29"	"37.000"	"30.000"	"0.0650997693261441"	"18"	"0"	"0.0002606"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESTGSIAK"	"[K].gILAADESTGSIAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"2"	"2"	"0.9510"	"0.0000"	"1"	"1"	"1"	"896.01746"	"1791.02764"	"1791.02640"	"0.69"	"0.00062"	"13/114"	"13"	"114"	"1636715.19708252"	"HCD"	"MS2"	"0"	"122.5"	"100.000"	"85.6854"	"29820"	"29820"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"188.3"	""	"157.0"	""	"169.6"	""	"176.7"	""	"186.5"	"283.1"	""	"1013"	"102"	"37.000"	"30.000"	"3.30810624915945E-09"	"24"	"0"	"5.718E-10"	"1.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"598.29083"	"1792.85794"	"1792.85911"	"-0.65"	"-0.00039"	"6/118"	"6"	"118"	"684251.700439453"	"HCD"	"MS2"	"3.456335"	"20.4"	"100.000"	"105.5049"	"37796"	"37796"	"37777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"22.2"	""	"27.9"	""	"34.8"	"0.9"	"42.2"	"37.2"	""	"625"	"17"	"34.000"	"27.000"	"0.63219349333696"	"16"	"0.0005161"	"0.00661"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"0.8824"	"0.0000"	"1"	"1"	"1"	"896.93262"	"1792.85796"	"1792.85911"	"-0.64"	"-0.00058"	"8/118"	"8"	"118"	"167493.728881836"	"HCD"	"MS2"	"0"	"14.4"	"100.000"	"105.7056"	"37877"	"37877"	"37865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"13.0"	""	"19.1"	""	"25.2"	""	"29.1"	"23.2"	""	"625"	"17"	"34.000"	"27.000"	"0.636575649283037"	"15"	"0.00167"	"0.01493"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"896.93274"	"1792.85820"	"1792.85911"	"-0.51"	"-0.00045"	"8/118"	"8"	"118"	"154705.897399902"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"105.4903"	"37773"	"37773"	"37759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"13.1"	""	"15.7"	""	"23.6"	""	"21.4"	"27.6"	""	"626"	"19"	"34.000"	"27.000"	"0.408831487985266"	"14"	"0.006237"	"0.0758"	"0.055"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"598.29120"	"1792.85904"	"1792.85911"	"-0.04"	"-0.00002"	"8/118"	"8"	"118"	"667712.61151123"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"105.2554"	"37678"	"37678"	"37660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"25.1"	""	"20.8"	""	"35.5"	""	"36.6"	"42.2"	""	"639"	"14"	"35.000"	"28.000"	"1.22877074363491"	"16"	"0.0005161"	"0.006933"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"896.93335"	"1792.85942"	"1792.85911"	"0.17"	"0.00016"	"9/118"	"9"	"118"	"421691.87512207"	"HCD"	"MS2"	"44.47083"	"27.4"	"100.000"	"105.1931"	"37653"	"37653"	"37634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"30.4"	""	"30.5"	""	"45.8"	""	"56.0"	"51.6"	""	"638"	"14"	"35.000"	"28.000"	"1.37022120137999"	"16"	"0.007379"	"0.0933"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTRDDEYDYLFK"	"[M].gTRDDEYDYLFk.[V]"	"N-Term(Prot)(Acetyl); K12(TMT6plex)"	"1"	"2"	"O35509"	"Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"P62494; O35509"	"Ras-related protein Rab-11A OS=Rattus norvegicus OX=10116 GN=Rab11a PE=1 SV=3; Ras-related protein Rab-11B OS=Rattus norvegicus OX=10116 GN=Rab11b PE=1 SV=4"	"1"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"896.93384"	"1792.86040"	"1792.85911"	"0.72"	"0.00064"	"8/118"	"8"	"118"	"203794.911010742"	"HCD"	"MS2"	"0"	"17.4"	"100.000"	"105.4317"	"37766"	"37766"	"37751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.2"	""	"16.7"	""	"22.6"	""	"27.4"	"1.7"	"34.7"	"29.3"	""	"646"	"19"	"35.000"	"28.000"	"0.383003305657992"	"15"	"0.006577"	"0.08211"	"0.048"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"896.97229"	"1792.93730"	"1792.93909"	"-1.00"	"-0.00089"	"6/162"	"6"	"162"	"87433.3226318359"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"66.1691"	"21920"	"21920"	"21894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.9"	""	"3.8"	""	"6.9"	""	"6.3"	""	"6.8"	"5.9"	""	"1157"	"12"	"37.000"	"30.000"	"3.47779007134076"	"14"	"0.002462"	"0.02294"	"0.166"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.3750"	"0.0000"	"1"	"1"	"1"	"896.97308"	"1792.93889"	"1792.93909"	"-0.11"	"-0.00010"	"7/162"	"7"	"162"	"87573.6697998047"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"65.8284"	"21781"	"21781"	"21757"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.8"	""	"6.1"	""	"3.8"	""	"9.3"	""	"7.6"	"8.3"	""	"1161"	"16"	"37.000"	"30.000"	"1.49211475189733"	"23"	"0.001615"	"0.01388"	"0.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPLPLQDGPGPEGGR"	"[R].sSPLPLQDGPGPEGGR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"O35828"	"Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2"	"0"	"2"	"2"	"0.9000"	"0.0000"	"1"	"1"	"1"	"896.97430"	"1792.94133"	"1792.93909"	"1.25"	"0.00112"	"9/162"	"9"	"162"	"110227.293395996"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"65.8249"	"21746"	"21746"	"21723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"8.5"	""	"5.0"	""	"6.5"	""	"10.1"	"7.6"	""	"1194"	"21"	"37.000"	"30.000"	"0.532076810065846"	"16"	"0.001615"	"0.01479"	"0.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EMSGSEASDVPVK"	"[R].eMSGSEASDVPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"598.64960"	"1793.93424"	"1793.93554"	"-0.72"	"-0.00043"	"8/112"	"8"	"112"	"1204697.2088623"	"HCD"	"MS2"	"10.97093"	"32.9"	"100.000"	"58.1808"	"18676"	"18676"	"18653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.1"	""	"40.1"	""	"33.3"	""	"75.0"	""	"62.0"	"55.3"	""	"1166"	"15"	"37.000"	"30.000"	"1.6775232757909"	"14"	"0.0001686"	"0.001414"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSMEEILEGLK"	"[K].gNSmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.3488"	"0.0000"	"1"	"1"	"1"	"598.66168"	"1793.97049"	"1793.97192"	"-0.80"	"-0.00048"	"10/120"	"10"	"120"	"320331.862915039"	"HCD"	"MS2"	"24.35279"	"17.3"	"100.000"	"98.5498"	"34977"	"34977"	"34954"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"20.1"	""	"20.6"	""	"40.0"	""	"33.5"	"31.6"	""	"1238"	"43"	"37.000"	"30.000"	"0.0028489881904686"	""	"0"	"5.786E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNSMEEILEGLK"	"[K].gNSmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.5294"	"0.0000"	"1"	"1"	"1"	"598.66241"	"1793.97269"	"1793.97192"	"0.43"	"0.00026"	"10/120"	"10"	"120"	"360357.200134277"	"HCD"	"MS2"	"33.7197"	"16.4"	"100.000"	"98.5503"	"35007"	"35007"	"34982"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"17.7"	""	"16.2"	""	"49.7"	""	"26.4"	"23.8"	""	"1261"	"34"	"37.000"	"31.000"	"0.024416594512308"	"30"	"0"	"0.0003"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSPAGKPSNSK"	"[M].sHPSPAGkPSNSk.[N]"	"N-Term(Prot)(Acetyl); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.66791"	"1793.98917"	"1793.99102"	"-1.03"	"-0.00062"	"12/128"	"12"	"128"	"1321051.5289917"	"HCD"	"MS2"	"0"	"57.8"	"100.000"	"24.3191"	"4958"	"4958"	"4935"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.5"	""	"75.3"	""	"77.9"	""	"88.1"	"0.4"	"103.9"	"100.1"	""	"1162"	"21"	"37.000"	"30.000"	"0.443788590258638"	"14"	"0.0001686"	"0.001105"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHPSPAGKPSNSK"	"[M].sHPSPAGkPSNSk.[N]"	"N-Term(Prot)(Acetyl); K8(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"Q6DGG0"	"Peptidyl-prolyl cis-trans isomerase D OS=Rattus norvegicus OX=10116 GN=Ppid PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.66809"	"1793.98972"	"1793.99102"	"-0.72"	"-0.00043"	"8/128"	"8"	"128"	"271966.271240234"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"24.3115"	"4993"	"4993"	"4962"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.9"	""	"23.6"	""	"23.8"	""	"27.2"	""	"34.7"	"33.3"	""	"1156"	"10"	"37.000"	"30.000"	"5.84692924562221"	"13"	"0.002189"	"0.02132"	"0.173"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDNPQTSPNLGR"	"[R].fYGDNPQTSPNLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.95905"	"1794.86258"	"1794.89723"	"-19.30"	"-0.01155"	"6/132"	"6"	"132"	"963036.573364258"	"HCD"	"MS2"	"10.43985"	"31.6"	"100.000"	"68.3898"	"22784"	"22784"	"22764"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.1"	""	"36.0"	""	"44.4"	""	"51.6"	"0.1"	"75.1"	"60.7"	""	"606"	"1"	"34.000"	"27.000"	"23.3583751126522"	"13"	"0.0001991"	"0.00223"	"0.376"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDNPQTSPNLGR"	"[R].fYGDNPQTSPNLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.96021"	"1794.86606"	"1794.89723"	"-17.36"	"-0.01039"	"7/132"	"7"	"132"	"1162247.39428711"	"HCD"	"MS2"	"12.61818"	"28.4"	"100.000"	"68.4299"	"22833"	"22833"	"22810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.0"	""	"38.0"	""	"32.0"	""	"49.5"	""	"61.7"	"55.2"	""	"631"	"2"	"34.000"	"28.000"	"20.9893680781649"	"13"	"0.0001991"	"0.004064"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDNPQTSPNLGR"	"[R].fYGDNPQTSPNLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.95227"	"1794.89726"	"1794.89723"	"0.02"	"0.00002"	"3/132"	"3"	"132"	"139029.076904297"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"68.6590"	"22894"	"22894"	"22876"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"13.4"	""	"16.1"	""	"9.3"	""	"19.6"	"16.0"	""	"860"	"8"	"36.000"	"29.000"	"6.79936656886265"	"13"	"0.006343"	"0.07882"	"0.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDNPQTSPNLGR"	"[R].fYGDNPQTSPNLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"897.95239"	"1794.89751"	"1794.89723"	"0.16"	"0.00014"	"7/132"	"7"	"132"	"137525.348510742"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"68.7456"	"22962"	"22962"	"22938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"14.0"	""	"17.5"	""	"8.1"	""	"14.4"	"19.6"	""	"862"	"21"	"36.000"	"29.000"	"0.320241248433478"	"14"	"0.001951"	"0.01685"	"0.194"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDNPQTSPNLGR"	"[R].fYGDNPQTSPNLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"897.95343"	"1794.89958"	"1794.89723"	"1.31"	"0.00118"	"8/132"	"8"	"132"	"165921.855285645"	"HCD"	"MS2"	"0"	"11.5"	"100.000"	"68.4459"	"22840"	"22840"	"22810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"17.9"	""	"15.0"	""	"15.7"	""	"21.9"	"17.4"	""	"887"	"15"	"36.000"	"29.000"	"1.36111125185148"	"15"	"0.002525"	"0.02462"	"0.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FYGDNPQTSPNLGR"	"[R].fYGDNPQTSPNLGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"Q5XI42"	"Aldehyde dehydrogenase family 3 member B1 OS=Rattus norvegicus OX=10116 GN=Aldh3b1 PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"897.95380"	"1794.90032"	"1794.89723"	"1.72"	"0.00154"	"10/132"	"10"	"132"	"164225.428100586"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"68.3364"	"22763"	"22763"	"22732"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"11.4"	""	"15.1"	""	"13.2"	""	"15.3"	"14.6"	""	"895"	"22"	"36.000"	"29.000"	"0.272767761514976"	"16"	"0.0001686"	"0.001109"	"0.439"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMSHFEPSEYIR"	"[K].vAMSHFEPSEYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.97235"	"1794.90250"	"1794.90462"	"-1.18"	"-0.00071"	"13/108"	"13"	"108"	"546462.592163086"	"HCD"	"MS2"	"33.94326"	"14.7"	"100.000"	"89.4224"	"31288"	"31288"	"31272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"17.5"	""	"17.6"	""	"21.3"	""	"30.0"	"34.6"	""	"921"	"33"	"36.000"	"29.000"	"0.0222448578339315"	"15"	"0"	"8.427E-05"	"0.669"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMSHFEPSEYIR"	"[K].vAMSHFEPSEYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"598.97253"	"1794.90305"	"1794.90462"	"-0.88"	"-0.00052"	"11/108"	"11"	"108"	"422152.608032227"	"HCD"	"MS2"	"25.00498"	"15.3"	"100.000"	"89.7113"	"31403"	"31403"	"31384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"19.9"	""	"18.3"	""	"24.2"	""	"32.6"	"31.1"	""	"931"	"17"	"36.000"	"29.000"	"0.839304758370129"	"15"	"0.0001686"	"0.001031"	"0.445"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMSHFEPSEYIR"	"[K].vAMSHFEPSEYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"598.97278"	"1794.90378"	"1794.90462"	"-0.47"	"-0.00028"	"13/108"	"13"	"108"	"666146.526184082"	"HCD"	"MS2"	"28.41212"	"21.1"	"100.000"	"89.3244"	"31289"	"31289"	"31265"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"23.5"	""	"24.9"	""	"28.4"	""	"44.3"	"53.9"	""	"927"	"27"	"36.000"	"29.000"	"0.102105641562528"	"14"	"0"	"0.0001447"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMSHFEPSEYIR"	"[K].vAMSHFEPSEYIR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"598.97345"	"1794.90580"	"1794.90462"	"0.65"	"0.00039"	"11/108"	"11"	"108"	"380616.730102539"	"HCD"	"MS2"	"28.34387"	"16.3"	"100.000"	"89.6225"	"31408"	"31408"	"31387"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"22.4"	""	"18.8"	""	"23.1"	""	"30.9"	"39.0"	""	"932"	"11"	"36.000"	"29.000"	"3.95718101366922"	"15"	"0.0001991"	"0.002618"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGGSGGGSFGDNLVTR"	"[R].sVGGSGGGSFGDNLVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"599.30835"	"1795.91050"	"1795.91361"	"-1.73"	"-0.00104"	"17/166"	"17"	"166"	"803589.05456543"	"HCD"	"MS2"	"40.37807"	"22.9"	"100.000"	"67.9010"	"22586"	"22586"	"22564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"24.8"	""	"25.3"	""	"39.9"	"0.8"	"50.3"	"49.9"	""	"992"	"57"	"36.000"	"29.000"	"0.000105312925315211"	"20"	"0"	"2.163E-08"	"1.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGGSGGGSFGDNLVTR"	"[R].sVGGSGGGSFGDNLVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.9649"	"0.0000"	"1"	"1"	"1"	"898.45947"	"1795.91167"	"1795.91361"	"-1.08"	"-0.00097"	"7/166"	"7"	"166"	"173968.72845459"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"67.8388"	"22561"	"22561"	"22536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.8"	""	"8.1"	""	"6.5"	""	"24.3"	""	"34.7"	"34.2"	""	"975"	"57"	"36.000"	"29.000"	"9.93058012881538E-05"	"18"	"0"	"0.0001404"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGGSGGGSFGDNLVTR"	"[R].sVGGSGGGSFGDNLVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.45972"	"1795.91216"	"1795.91361"	"-0.81"	"-0.00072"	"9/166"	"9"	"166"	"140961.469787598"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"68.1233"	"22708"	"22708"	"22684"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"7.2"	""	"2.7"	""	"19.9"	""	"25.0"	"25.1"	""	"975"	"18"	"36.000"	"29.000"	"0.762034475787466"	"14"	"0.0001991"	"0.002163"	"0.379"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGGSGGGSFGDNLVTR"	"[R].sVGGSGGGSFGDNLVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"898.45978"	"1795.91228"	"1795.91361"	"-0.74"	"-0.00066"	"6/166"	"6"	"166"	"95475.0136108398"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"67.8241"	"22586"	"22586"	"22563"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	""	""	"2.9"	""	"4.9"	""	"15.6"	""	"14.5"	"21.7"	""	"976"	"26"	"36.000"	"29.000"	"0.11076940477193"	"16"	"0.0001686"	"0.001717"	"0.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGGSGGGSFGDNLVTR"	"[R].sVGGSGGGSFGDNLVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.46051"	"1795.91374"	"1795.91361"	"0.08"	"0.00007"	"3/166"	"3"	"166"	"97124.6395263672"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"68.1360"	"22681"	"22681"	"22659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	""	"4.2"	""	"2.5"	""	"11.3"	""	"16.7"	"25.1"	""	"983"	"1"	"36.000"	"29.000"	"37.8027611400869"	"13"	"0.0005161"	"0.006804"	"0.276"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVGGSGGGSFGDNLVTR"	"[R].sVGGSGGGSFGDNLVTR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"P48679"	"Prelamin-A/C OS=Rattus norvegicus OX=10116 GN=Lmna PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.30951"	"1795.91397"	"1795.91361"	"0.21"	"0.00012"	"19/166"	"19"	"166"	"843147.232788086"	"HCD"	"MS2"	"30.46039"	"20.5"	"100.000"	"67.9852"	"22652"	"22652"	"22626"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.1"	""	"25.6"	""	"21.8"	""	"38.7"	"0.7"	"41.2"	"42.7"	""	"980"	"72"	"36.000"	"29.000"	"3.20771725292965E-06"	"17"	"0"	"4.109E-08"	"1.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"898.47333"	"1795.93938"	"1795.94278"	"-1.89"	"-0.00170"	"8/126"	"8"	"126"	"111270.148986816"	"HCD"	"MS2"	"9.053782"	"7.6"	"100.000"	"100.2247"	"35656"	"35656"	"35634"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"9.7"	""	"8.7"	""	"12.2"	""	"14.5"	"15.0"	""	"1116"	"7"	"37.000"	"30.000"	"10.0146136377255"	"13"	"0.00296"	"0.03148"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"599.31848"	"1795.94089"	"1795.94278"	"-1.05"	"-0.00063"	"14/126"	"14"	"126"	"1447472.04180908"	"HCD"	"MS2"	"38.1469"	"23.7"	"100.000"	"99.6750"	"35460"	"35460"	"35440"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.7"	""	"34.1"	""	"30.3"	""	"42.5"	"1.3"	"31.7"	"35.6"	""	"1123"	"12"	"37.000"	"30.000"	"3.20885254491253"	"16"	"0.0005778"	"0.007022"	"0.273"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"599.31860"	"1795.94126"	"1795.94278"	"-0.85"	"-0.00051"	"13/126"	"13"	"126"	"2635449.10522461"	"HCD"	"MS2"	"21.55535"	"34.1"	"100.000"	"99.6394"	"35417"	"35417"	"35398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.7"	""	"42.6"	""	"44.6"	""	"62.0"	"0.7"	"48.7"	"47.7"	""	"1123"	"18"	"37.000"	"30.000"	"0.964605559388987"	"19"	"0.0001991"	"0.004902"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"898.47437"	"1795.94145"	"1795.94278"	"-0.74"	"-0.00066"	"8/126"	"8"	"126"	"131925.65802002"	"HCD"	"MS2"	"9.714158"	"6.9"	"100.000"	"100.3020"	"35715"	"35715"	"35691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"9.8"	""	"8.4"	""	"13.5"	""	"10.1"	"12.5"	""	"1126"	"18"	"37.000"	"30.000"	"0.996571343532708"	"22"	"0.00296"	"0.03146"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"599.31885"	"1795.94199"	"1795.94278"	"-0.44"	"-0.00026"	"14/126"	"14"	"126"	"587494.480712891"	"HCD"	"MS2"	"6.71478"	"9.8"	"100.000"	"100.2582"	"35697"	"35697"	"35678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"12.4"	""	"15.1"	""	"13.3"	""	"17.5"	"17.5"	""	"1137"	"50"	"37.000"	"30.000"	"0.000545419259016808"	"22"	"0"	"0.0002347"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"898.47491"	"1795.94255"	"1795.94278"	"-0.13"	"-0.00011"	"12/126"	"12"	"126"	"2202910.62231445"	"HCD"	"MS2"	"0"	"84.4"	"100.000"	"99.9862"	"35587"	"35587"	"35570"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.5"	""	"93.1"	""	"114.7"	""	"144.9"	"0.6"	"148.9"	"154.3"	""	"1115"	"56"	"37.000"	"30.000"	"0.000145293060412438"	"18"	"0"	"1.757E-05"	"0.809"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9038"	"0.0000"	"1"	"1"	"1"	"898.47498"	"1795.94267"	"1795.94278"	"-0.06"	"-0.00005"	"12/126"	"12"	"126"	"1957988.92547607"	"HCD"	"MS2"	"0"	"77.1"	"100.000"	"99.9064"	"35526"	"35526"	"35508"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"127.6"	""	"85.4"	""	"101.7"	""	"123.5"	"4.4"	"143.4"	"144.7"	""	"1117"	"52"	"37.000"	"30.000"	"0.000327358164881085"	"20"	"0"	"9.595E-05"	"0.657"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"599.31915"	"1795.94291"	"1795.94278"	"0.07"	"0.00004"	"14/126"	"14"	"126"	"451142.069335938"	"HCD"	"MS2"	"7.196551"	"11.6"	"100.000"	"100.2616"	"35671"	"35671"	"35649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.8"	""	"12.2"	""	"20.5"	""	"20.7"	""	"20.5"	"21.4"	""	"1117"	"20"	"37.000"	"30.000"	"0.53459288881817"	"14"	"0.0001686"	"0.00117"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"898.47510"	"1795.94292"	"1795.94278"	"0.08"	"0.00007"	"10/126"	"10"	"126"	"291438.777770996"	"HCD"	"MS2"	"30.37436"	"15.3"	"100.000"	"99.6183"	"35409"	"35409"	"35383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.6"	""	"16.7"	""	"20.8"	""	"25.8"	""	"27.8"	"27.4"	""	"1117"	"35"	"37.000"	"30.000"	"0.0161444471430112"	"22"	"9.9E-05"	"0.0004699"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"599.31940"	"1795.94364"	"1795.94278"	"0.48"	"0.00029"	"14/126"	"14"	"126"	"6822701.06243896"	"HCD"	"MS2"	"3.043115"	"26.9"	"100.000"	"99.9537"	"35573"	"35573"	"35558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.8"	""	"30.6"	""	"38.6"	""	"47.0"	"1.5"	"44.9"	"46.9"	""	"1113"	"56"	"37.000"	"30.000"	"0.000156843010124867"	"17"	"0"	"0.0001124"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.9825"	"0.0000"	"1"	"1"	"1"	"599.31952"	"1795.94400"	"1795.94278"	"0.68"	"0.00041"	"16/126"	"16"	"126"	"4769633.53143311"	"HCD"	"MS2"	"1.671727"	"21.7"	"100.000"	"99.9455"	"35542"	"35542"	"35524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"28.6"	""	"28.7"	""	"32.6"	"0.9"	"36.1"	"40.7"	""	"1114"	"57"	"37.000"	"30.000"	"0.000117450587951284"	"17"	"0"	"1.233E-06"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITPSYVAFTPEGER"	"[R].iTPSYVAFTPEGER.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"898.47601"	"1795.94475"	"1795.94278"	"1.10"	"0.00098"	"6/126"	"6"	"126"	"198905.37701416"	"HCD"	"MS2"	"12.51693"	"9.9"	"100.000"	"99.6796"	"35462"	"35462"	"35440"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"11.8"	""	"13.2"	""	"16.6"	""	"17.3"	"15.0"	""	"1113"	"38"	"37.000"	"30.000"	"0.00886064156603977"	"17"	"0.0001991"	"0.005402"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.7551"	"0.0000"	"1"	"1"	"1"	"898.47925"	"1795.95122"	"1795.95184"	"-0.34"	"-0.00031"	"15/90"	"15"	"90"	"1083621.68591309"	"HCD"	"MS2"	"44.09134"	"76.3"	"100.000"	"93.8632"	"33113"	"33113"	"33094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.2"	""	"108.4"	""	"112.9"	""	"113.9"	""	"133.1"	"151.8"	""	"1106"	"49"	"37.000"	"30.000"	"0.000645245718234712"	"27"	"0"	"2.265E-06"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.9062"	"0.0000"	"1"	"1"	"1"	"898.47943"	"1795.95159"	"1795.95184"	"-0.14"	"-0.00013"	"14/90"	"14"	"90"	"1082915.03747559"	"HCD"	"MS2"	"36.08431"	"82.6"	"100.000"	"93.9169"	"33100"	"33100"	"33083"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"114.3"	""	"119.9"	""	"111.2"	""	"123.7"	""	"159.5"	"160.3"	""	"1106"	"32"	"37.000"	"30.000"	"0.0354588895851594"	"17"	"0"	"0.0001806"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"599.32208"	"1795.95169"	"1795.95184"	"-0.08"	"-0.00005"	"11/90"	"11"	"90"	"1739149.76989746"	"HCD"	"MS2"	"5.098482"	"49.3"	"100.000"	"94.1175"	"33181"	"33181"	"33163"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.1"	""	"73.0"	""	"66.9"	""	"63.7"	"0.8"	"99.9"	"96.3"	""	"1111"	"44"	"37.000"	"30.000"	"0.00236964922694284"	"24"	"0"	"7.136E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"599.32208"	"1795.95169"	"1795.95184"	"-0.08"	"-0.00005"	"11/90"	"11"	"90"	"2846848.11669922"	"HCD"	"MS2"	"6.049715"	"76.1"	"100.000"	"93.9742"	"33159"	"33159"	"33142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.5"	""	"98.7"	""	"107.6"	""	"109.5"	""	"143.7"	"160.5"	""	"1111"	"46"	"37.000"	"30.000"	"0.0015656117183174"	"24"	"0"	"5.095E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8929"	"0.0000"	"1"	"1"	"1"	"898.47961"	"1795.95195"	"1795.95184"	"0.06"	"0.00006"	"10/90"	"10"	"90"	"979745.411254883"	"HCD"	"MS2"	"56.23419"	"66.3"	"100.000"	"93.7847"	"33081"	"33081"	"33062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"102.6"	""	"90.8"	""	"93.9"	""	"95.0"	""	"119.1"	"130.9"	""	"1105"	"28"	"37.000"	"30.000"	"0.0836242589761005"	"18"	"0"	"6.173E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"599.32233"	"1795.95243"	"1795.95184"	"0.33"	"0.00020"	"11/90"	"11"	"90"	"1484772.07061768"	"HCD"	"MS2"	"43.1619"	"39.3"	"100.000"	"93.6809"	"33039"	"33039"	"33026"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.1"	""	"56.4"	""	"52.5"	""	"62.3"	"0.6"	"73.5"	"75.1"	""	"1103"	"45"	"37.000"	"30.000"	"0.00174399612958286"	"24"	"0"	"0.0001428"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"2"	"2"	"0.8696"	"0.0000"	"1"	"1"	"1"	"898.47992"	"1795.95256"	"1795.95184"	"0.40"	"0.00036"	"10/90"	"10"	"90"	"1082889.69708252"	"HCD"	"MS2"	"40.92782"	"71.5"	"100.000"	"93.9605"	"33117"	"33117"	"33099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.5"	""	"104.7"	""	"88.3"	""	"107.5"	"1.3"	"133.1"	"136.3"	""	"1104"	"46"	"37.000"	"30.000"	"0.00135499932145814"	"21"	"0"	"5.868E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7755"	"0.0000"	"1"	"1"	"1"	"599.32245"	"1795.95279"	"1795.95184"	"0.53"	"0.00032"	"11/90"	"11"	"90"	"2395794.15002441"	"HCD"	"MS2"	"28.75863"	"63.5"	"100.000"	"93.8106"	"33056"	"33056"	"33037"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"91.0"	""	"95.6"	""	"84.6"	""	"88.8"	"0.2"	"120.7"	"120.6"	""	"1105"	"49"	"37.000"	"30.000"	"0.000668855468786641"	"26"	"0"	"0.0001591"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YALYDATYETK"	"[R].yALYDATYETk.[E]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"P45592"	"Cofilin-1 OS=Rattus norvegicus OX=10116 GN=Cfl1 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"599.32306"	"1795.95462"	"1795.95184"	"1.55"	"0.00093"	"10/90"	"10"	"90"	"217677.799499512"	"HCD"	"MS2"	"27.01479"	"10.9"	"100.000"	"94.2924"	"33288"	"33288"	"33262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"13.6"	""	"14.5"	""	"18.4"	""	"19.8"	"21.1"	""	"1093"	"27"	"37.000"	"30.000"	"0.117649521802687"	"17"	"9.9E-05"	"0.0005947"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDSAEFAELK"	"[K].gIGTDSAEFAELk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"599.33252"	"1795.98301"	"1795.98420"	"-0.67"	"-0.00040"	"14/110"	"14"	"110"	"660049.183044434"	"HCD"	"MS2"	"3.719739"	"22.0"	"100.000"	"101.8510"	"36315"	"36315"	"36292"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"25.1"	""	"30.4"	""	"35.0"	""	"47.1"	"47.4"	""	"1026"	"32"	"37.000"	"30.000"	"0.0302773154128156"	"20"	"0"	"6.711E-06"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDSAEFAELK"	"[K].gIGTDSAEFAELk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"599.33270"	"1795.98355"	"1795.98420"	"-0.36"	"-0.00022"	"14/110"	"14"	"110"	"519524.703857422"	"HCD"	"MS2"	"14.48054"	"18.1"	"100.000"	"101.9711"	"36388"	"36388"	"36366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"19.0"	""	"25.9"	""	"28.3"	""	"32.6"	"40.1"	""	"1029"	"40"	"37.000"	"30.000"	"0.00470311262736443"	"25"	"0"	"1.463E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDSAEFAELK"	"[K].gIGTDSAEFAELk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"898.49585"	"1795.98442"	"1795.98420"	"0.12"	"0.00011"	"5/110"	"5"	"110"	"101458.625549316"	"HCD"	"MS2"	"0"	"11.9"	"100.000"	"101.7472"	"36273"	"36273"	"36248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.9"	""	"15.2"	""	"21.1"	""	"18.4"	""	"19.2"	"22.1"	""	"1016"	"3"	"37.000"	"30.000"	"24.1470294778945"	"13"	"0.009846"	"0.133"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIGTDSAEFAELK"	"[K].gIGTDSAEFAELk.[T]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"Q9JK25"	"CAP-Gly domain-containing linker protein 1 OS=Rattus norvegicus OX=10116 GN=Clip1 PE=1 SV=2"	"0"	"2"	"2"	"0.9630"	"0.0000"	"1"	"1"	"1"	"898.49677"	"1795.98625"	"1795.98420"	"1.14"	"0.00103"	"9/110"	"9"	"110"	"124770.920959473"	"HCD"	"MS2"	"21.30688"	"11.7"	"100.000"	"101.9757"	"36390"	"36390"	"36366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"12.2"	""	"13.9"	""	"21.0"	""	"18.9"	"29.3"	""	"991"	"27"	"36.000"	"29.000"	"0.0975087656549741"	"16"	"0.000264"	"0.006115"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTLAGNFNPVSEER"	"[R].hTLAGNFNPVSEER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.64569"	"1799.92252"	"1799.92378"	"-0.70"	"-0.00042"	"16/142"	"16"	"142"	"1135390.5949707"	"HCD"	"MS2"	"7.378042"	"22.3"	"100.000"	"50.0954"	"15393"	"15393"	"15371"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.5"	""	"23.8"	""	"28.7"	""	"36.3"	"1.0"	"45.3"	"43.9"	""	"927"	"74"	"36.000"	"29.000"	"2.04197179235288E-06"	"17"	"0"	"3.427E-08"	"1.367"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTLAGNFNPVSEER"	"[R].hTLAGNFNPVSEER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.64587"	"1799.92307"	"1799.92378"	"-0.39"	"-0.00024"	"16/142"	"16"	"142"	"3623840.82226563"	"HCD"	"MS2"	"4.545859"	"41.4"	"100.000"	"49.7820"	"15265"	"15265"	"15244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"40.8"	""	"50.7"	""	"72.6"	"0.5"	"84.4"	"86.3"	""	"923"	"56"	"36.000"	"29.000"	"0.000108685524451801"	"16"	"0"	"1.42E-07"	"1.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTLAGNFNPVSEER"	"[R].hTLAGNFNPVSEER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.64606"	"1799.92362"	"1799.92378"	"-0.09"	"-0.00005"	"16/142"	"16"	"142"	"2035200.11358643"	"HCD"	"MS2"	"1.982689"	"35.2"	"100.000"	"50.3977"	"15481"	"15481"	"15462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.5"	""	"44.4"	""	"41.0"	""	"60.5"	"0.4"	"69.3"	"73.7"	""	"918"	"59"	"36.000"	"29.000"	"5.64693365802883E-05"	"16"	"0"	"4.767E-08"	"1.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTLAGNFNPVSEER"	"[R].hTLAGNFNPVSEER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"Q6AY20"	"Cation-dependent mannose-6-phosphate receptor OS=Rattus norvegicus OX=10116 GN=M6pr PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.64630"	"1799.92435"	"1799.92378"	"0.32"	"0.00019"	"16/142"	"16"	"142"	"2468902.37774658"	"HCD"	"MS2"	"6.745215"	"35.3"	"100.000"	"50.1007"	"15360"	"15360"	"15340"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"43.5"	""	"45.9"	""	"55.4"	"2.0"	"74.0"	"68.6"	""	"925"	"60"	"36.000"	"29.000"	"4.50932707444291E-05"	"16"	"0"	"2.044E-07"	"1.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"600.64740"	"1799.92765"	"1799.92834"	"-0.39"	"-0.00023"	"16/116"	"16"	"116"	"909446.260925293"	"HCD"	"MS2"	"18.77888"	"30.9"	"100.000"	"83.2571"	"28811"	"28811"	"28791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	""	"41.2"	""	"44.7"	""	"40.7"	"2.4"	"52.9"	"66.1"	""	"946"	"59"	"36.000"	"29.000"	"5.83258586117273E-05"	"24"	"0"	"2.219E-06"	"0.994"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.64740"	"1799.92765"	"1799.92834"	"-0.39"	"-0.00023"	"10/116"	"10"	"116"	"1259936.81463623"	"HCD"	"MS2"	"34.1548"	"40.7"	"100.000"	"83.6183"	"28986"	"28986"	"28965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.9"	""	"55.5"	""	"63.8"	""	"50.6"	""	"80.5"	"87.8"	""	"946"	"17"	"36.000"	"29.000"	"0.983696533000048"	"14"	"0"	"0.0003297"	"0.547"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.46759"	"1799.92790"	"1799.92834"	"-0.24"	"-0.00022"	"4/116"	"4"	"116"	"103577.691467285"	"HCD"	"MS2"	"0"	"9.8"	"100.000"	"83.2380"	"28832"	"28832"	"28810"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"12.6"	""	"11.0"	""	"9.7"	""	"18.5"	"24.9"	""	"947"	"9"	"36.000"	"29.000"	"6.3433691149618"	"13"	"0.0008247"	"0.007639"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.8293"	"0.0000"	"1"	"1"	"1"	"900.46796"	"1799.92864"	"1799.92834"	"0.16"	"0.00015"	"12/116"	"12"	"116"	"135477.820129395"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"83.5629"	"28964"	"28964"	"28940"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"15.8"	""	"16.3"	""	"10.8"	""	"20.6"	"21.1"	""	"938"	"41"	"36.000"	"29.000"	"0.00364899142437668"	"22"	"0"	"0.0001431"	"0.622"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"600.64783"	"1799.92893"	"1799.92834"	"0.33"	"0.00020"	"12/116"	"12"	"116"	"925487.236755371"	"HCD"	"MS2"	"10.85793"	"30.5"	"100.000"	"83.2980"	"28856"	"28856"	"28835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.0"	""	"43.9"	""	"43.6"	""	"39.7"	""	"63.2"	"61.5"	""	"943"	"37"	"36.000"	"29.000"	"0.010458796119358"	"23"	"0"	"0.0001348"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.46814"	"1799.92900"	"1799.92834"	"0.37"	"0.00033"	"13/116"	"13"	"116"	"116149.805725098"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"83.5360"	"28924"	"28924"	"28905"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"16.1"	""	"11.7"	""	"10.3"	""	"17.5"	"23.3"	""	"944"	"46"	"36.000"	"29.000"	"0.00127626834785937"	"15"	"0"	"7.184E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SMVAVMDSDTTGK"	"[R].sMVAVMDSDTTGk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"Q64537"	"Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"900.46887"	"1799.93047"	"1799.92834"	"1.18"	"0.00106"	"11/116"	"11"	"116"	"127183.489929199"	"HCD"	"MS2"	"35.57073"	"9.8"	"100.000"	"83.1995"	"28788"	"28788"	"28763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"11.8"	""	"15.7"	""	"14.2"	""	"14.9"	"23.4"	""	"943"	"33"	"36.000"	"29.000"	"0.0213050077772776"	"17"	"0"	"0.0001095"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESISLSPEQLAQLR"	"[K].eSISLSPEQLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"3"	"3"	"0.8788"	"0.0000"	"1"	"1"	"1"	"600.67340"	"1800.00565"	"1800.00644"	"-0.44"	"-0.00026"	"12/128"	"12"	"128"	"837544.162658691"	"HCD"	"MS2"	"25.79653"	"14.6"	"100.000"	"109.0034"	"39126"	"39126"	"39115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"21.2"	""	"17.4"	""	"27.9"	""	"25.7"	"28.1"	""	"897"	"33"	"36.000"	"29.000"	"0.0238650554281157"	"19"	"0"	"1.169E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESISLSPEQLAQLR"	"[K].eSISLSPEQLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.50690"	"1800.00652"	"1800.00644"	"0.04"	"0.00004"	"5/128"	"5"	"128"	"86618.9379272461"	"HCD"	"MS2"	"16.04892"	"3.1"	"100.000"	"109.1698"	"39202"	"39202"	"39193"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"2.3"	""	"6.6"	""	"6.4"	""	"4.5"	"4.3"	""	"888"	"23"	"36.000"	"29.000"	"0.211048840318605"	"14"	"0.001615"	"0.01353"	"0.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESISLSPEQLAQLR"	"[K].eSISLSPEQLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"900.50726"	"1800.00725"	"1800.00644"	"0.45"	"0.00040"	"5/128"	"5"	"128"	"76836.4419555664"	"HCD"	"MS2"	"12.17313"	"4.7"	"100.000"	"108.8611"	"39073"	"39073"	"39058"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.9"	""	"8.9"	""	"5.6"	""	"7.2"	""	"7.9"	"6.5"	""	"929"	"25"	"36.000"	"29.000"	"0.133963263320231"	"15"	"0.001872"	"0.01577"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESISLSPEQLAQLR"	"[K].eSISLSPEQLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.50732"	"1800.00737"	"1800.00644"	"0.52"	"0.00046"	"6/128"	"6"	"128"	"80416.6586303711"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"109.1352"	"39174"	"39174"	"39166"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.2"	""	"5.0"	""	"4.6"	""	"6.8"	""	"6.9"	"6.6"	""	"925"	"35"	"36.000"	"29.000"	"0.0141290101486217"	"15"	"0"	"0.0001706"	"0.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ESISLSPEQLAQLR"	"[K].eSISLSPEQLAQLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"B0BNN3"	"Carbonic anhydrase 1 OS=Rattus norvegicus OX=10116 GN=Ca1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.50739"	"1800.00749"	"1800.00644"	"0.58"	"0.00053"	"4/128"	"4"	"128"	"84402.8038330078"	"HCD"	"MS2"	"10.68082"	"3.9"	"100.000"	"109.4354"	"39298"	"39298"	"39289"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.7"	""	"5.9"	""	"1.8"	""	"9.8"	""	"4.8"	"7.3"	""	"922"	"8"	"36.000"	"29.000"	"6.66347734313873"	"13"	"0.004314"	"0.05088"	"0.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLRLPEGDLGK"	"[R].eDLRLPEGDLGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.68005"	"1800.02561"	"1800.02673"	"-0.63"	"-0.00038"	"11/120"	"11"	"120"	"1363433.60400391"	"HCD"	"MS2"	"11.71389"	"64.0"	"100.000"	"85.8608"	"29891"	"29891"	"29871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"126.8"	""	"92.3"	""	"94.7"	""	"103.8"	"1.8"	"94.1"	"90.1"	""	"885"	"16"	"36.000"	"29.000"	"1.16121670544761"	"13"	"9.9E-05"	"0.0009684"	"0.451"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLRLPEGDLGK"	"[R].eDLRLPEGDLGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"1"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"600.68011"	"1800.02579"	"1800.02673"	"-0.52"	"-0.00031"	"9/120"	"9"	"120"	"2806615.75305176"	"HCD"	"MS2"	"5.591795"	"116.6"	"100.000"	"86.1379"	"29973"	"29973"	"29964"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"225.9"	""	"166.8"	""	"173.8"	""	"186.5"	"1.4"	"171.5"	"174.8"	""	"885"	"26"	"36.000"	"29.000"	"0.101370893634974"	"18"	"9.9E-05"	"0.0006839"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLRLPEGDLGK"	"[R].eDLRLPEGDLGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.68024"	"1800.02616"	"1800.02673"	"-0.32"	"-0.00019"	"7/120"	"7"	"120"	"1143109.28552246"	"HCD"	"MS2"	"27.00887"	"54.5"	"100.000"	"86.3569"	"30060"	"30060"	"30041"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.4"	""	"69.5"	""	"78.6"	""	"98.8"	"1.0"	"79.1"	"80.7"	""	"876"	"11"	"36.000"	"29.000"	"3.806046680274"	"13"	"0.0001991"	"0.00555"	"0.295"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLRLPEGDLGK"	"[R].eDLRLPEGDLGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"1"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"600.68036"	"1800.02652"	"1800.02673"	"-0.12"	"-0.00007"	"6/120"	"6"	"120"	"1064251.61749268"	"HCD"	"MS2"	"20.37287"	"50.2"	"100.000"	"85.8589"	"29861"	"29861"	"29844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.3"	""	"67.3"	""	"68.6"	""	"78.4"	""	"82.9"	"76.8"	""	"873"	"19"	"36.000"	"29.000"	"0.53086518928214"	"18"	"0.0001686"	"0.001171"	"0.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDLRLPEGDLGK"	"[R].eDLRLPEGDLGk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"Q3T1J1"	"Eukaryotic translation initiation factor 5A-1 OS=Rattus norvegicus OX=10116 GN=Eif5a PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.68060"	"1800.02726"	"1800.02673"	"0.29"	"0.00017"	"6/120"	"6"	"120"	"2498181.74841309"	"HCD"	"MS2"	"7.694205"	"110.5"	"100.000"	"86.1464"	"30007"	"30007"	"29995"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"202.2"	"2.7"	"155.7"	""	"168.0"	""	"181.6"	"0.3"	"169.8"	"163.2"	""	"887"	"19"	"36.000"	"29.000"	"0.591416755164434"	"14"	"9.9E-05"	"0.0005938"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNDEDPVVVTK"	"[K].lLNDEDPVVVTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"600.68854"	"1800.05106"	"1800.05189"	"-0.46"	"-0.00028"	"13/120"	"13"	"120"	"1473569.46630859"	"HCD"	"MS2"	"17.44341"	"50.2"	"100.000"	"102.8442"	"36738"	"36738"	"36718"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.2"	""	"70.2"	""	"57.9"	""	"90.3"	"0.6"	"81.3"	"102.0"	""	"766"	"29"	"35.000"	"28.000"	"0.0482168432717166"	"20"	"0"	"2.957E-05"	"0.763"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNDEDPVVVTK"	"[K].lLNDEDPVVVTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"600.68860"	"1800.05124"	"1800.05189"	"-0.36"	"-0.00021"	"12/120"	"12"	"120"	"470470.724060059"	"HCD"	"MS2"	"57.0443"	"18.0"	"100.000"	"102.4763"	"36568"	"36568"	"36543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"26.4"	""	"21.6"	""	"30.6"	""	"31.6"	"36.3"	""	"762"	"43"	"35.000"	"28.000"	"0.00204138526512583"	"23"	"0"	"4.905E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNDEDPVVVTK"	"[K].lLNDEDPVVVTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"900.52936"	"1800.05144"	"1800.05189"	"-0.25"	"-0.00022"	"7/120"	"7"	"120"	"97169.595703125"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"102.7448"	"36698"	"36698"	"36683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"11.5"	""	"12.1"	""	"13.3"	""	"11.8"	"15.4"	""	"763"	"11"	"35.000"	"28.000"	"2.96138274993846"	"16"	"0.004959"	"0.06229"	"0.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNDEDPVVVTK"	"[K].lLNDEDPVVVTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.68903"	"1800.05252"	"1800.05189"	"0.35"	"0.00021"	"9/120"	"9"	"120"	"1006395.97967529"	"HCD"	"MS2"	"31.00025"	"41.9"	"100.000"	"102.7742"	"36688"	"36688"	"36669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.2"	""	"46.7"	""	"48.5"	""	"80.8"	""	"70.8"	"83.8"	""	"769"	"19"	"35.000"	"28.000"	"0.519871900548199"	"14"	"0.0001991"	"0.002067"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNDEDPVVVTK"	"[K].lLNDEDPVVVTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.9459"	"0.0000"	"1"	"1"	"1"	"900.53027"	"1800.05327"	"1800.05189"	"0.77"	"0.00069"	"7/120"	"7"	"120"	"150725.77532959"	"HCD"	"MS2"	"0"	"10.4"	"100.000"	"102.5250"	"36587"	"36587"	"36569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"12.1"	""	"16.3"	""	"16.1"	""	"17.7"	"17.4"	""	"755"	"37"	"35.000"	"28.000"	"0.00672847984711653"	"16"	"0.0001686"	"0.001657"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LLNDEDPVVVTK"	"[K].lLNDEDPVVVTk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"Q6P0K8"	"Junction plakoglobin OS=Rattus norvegicus OX=10116 GN=Jup PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"900.53052"	"1800.05376"	"1800.05189"	"1.04"	"0.00094"	"5/120"	"5"	"120"	"94732.1262207031"	"HCD"	"MS2"	"28.05787"	"6.9"	"100.000"	"103.0516"	"36822"	"36822"	"36801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.1"	""	"10.4"	""	"9.1"	""	"3.8"	""	"15.3"	"18.5"	""	"740"	"17"	"35.000"	"28.000"	"0.674841409858266"	"16"	"0.002755"	"0.02927"	"0.144"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNASTDYDLSDK"	"[K].nNASTDYDLSDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"900.95184"	"1800.89641"	"1800.90159"	"-2.88"	"-0.00259"	"8/124"	"8"	"124"	"123446.978149414"	"HCD"	"MS2"	"100"	"13.2"	"100.000"	"53.9505"	"16926"	"16926"	"16904"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"10.9"	""	"13.1"	""	"21.9"	""	"29.4"	"27.1"	""	"748"	"12"	"35.000"	"28.000"	"2.51693269450335"	"13"	"0.001615"	"0.01468"	"0.207"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NNASTDYDLSDK"	"[K].nNASTDYDLSDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"P21531"	"60S ribosomal protein L3 OS=Rattus norvegicus OX=10116 GN=Rpl3 PE=1 SV=3"	"0"	"2"	"2"	"0.9444"	"0.0000"	"1"	"1"	"1"	"900.95386"	"1800.90044"	"1800.90159"	"-0.64"	"-0.00058"	"9/124"	"9"	"124"	"150331.200561523"	"HCD"	"MS2"	"0"	"13.1"	"100.000"	"53.6261"	"16827"	"16827"	"16806"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.0"	""	"14.2"	""	"11.0"	""	"27.5"	""	"27.3"	"23.0"	""	"800"	"18"	"36.000"	"29.000"	"0.612434984672812"	"14"	"0.0001991"	"0.005427"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQYDDVPEYK"	"[K].sVQYDDVPEYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"900.97461"	"1800.94194"	"1800.94200"	"-0.03"	"-0.00003"	"8/112"	"8"	"112"	"159662.991455078"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"77.8241"	"26609"	"26609"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"6.1"	""	"15.0"	""	"25.0"	""	"26.5"	"29.0"	""	"932"	"56"	"36.000"	"29.000"	"0.000127170364678855"	"23"	"0"	"0.0001294"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVQYDDVPEYK"	"[K].sVQYDDVPEYk.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"O35112"	"CD166 antigen OS=Rattus norvegicus OX=10116 GN=Alcam PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"900.97498"	"1800.94267"	"1800.94200"	"0.37"	"0.00034"	"5/112"	"5"	"112"	"143581.987304688"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"77.9668"	"26694"	"26694"	"26670"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"8.7"	""	"11.4"	""	"18.6"	""	"30.1"	"21.1"	""	"928"	"24"	"36.000"	"29.000"	"0.195217155570382"	"17"	"0.001615"	"0.01443"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEMLPEEPLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"900.99329"	"1800.97930"	"1800.98176"	"-1.37"	"-0.00123"	"5/100"	"5"	"100"	"87868.1915893555"	"HCD"	"MS2"	"44.64283"	"5.1"	"100.000"	"96.8579"	"34293"	"34293"	"34267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"7.6"	""	"7.3"	""	"5.9"	""	"6.2"	"11.7"	""	"996"	"10"	"36.000"	"29.000"	"5.06091849049607"	"18"	"0.005507"	"0.06984"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEMLPEEPLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"600.99860"	"1800.98124"	"1800.98176"	"-0.29"	"-0.00017"	"8/100"	"8"	"100"	"575319.911254883"	"HCD"	"MS2"	"31.16411"	"17.9"	"100.000"	"96.9391"	"34356"	"34356"	"34334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"27.2"	""	"23.5"	""	"23.9"	""	"39.1"	"34.6"	""	"1014"	"34"	"37.000"	"30.000"	"0.0184080573768441"	"16"	"9.9E-05"	"0.0007661"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMLPEEPLK"	"[R].gAEEMLPEEPLk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"Q9JJ22"	"Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus OX=10116 GN=Erap1 PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"600.99878"	"1800.98178"	"1800.98176"	"0.01"	"0.00001"	"7/100"	"7"	"100"	"483945.179748535"	"HCD"	"MS2"	"17.15088"	"16.5"	"100.000"	"96.9134"	"34315"	"34315"	"34297"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.7"	""	"18.9"	""	"22.7"	""	"20.9"	""	"33.9"	"30.2"	""	"997"	"21"	"36.000"	"29.000"	"0.382529702446867"	"14"	"9.9E-05"	"0.0005154"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAPNWATQDSGFY"	"[R].sEAPNWATQDSGFY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"901.41412"	"1801.82097"	"1801.82306"	"-1.16"	"-0.00104"	"5/132"	"5"	"132"	"86123.4812011719"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"110.7206"	"39813"	"39813"	"39788"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.0"	""	"1.9"	""	"5.7"	""	"3.0"	""	"5.3"	"2.8"	""	"340"	"21"	"32.000"	"25.000"	"0.13441536675997"	"16"	"0.001049"	"0.008618"	"0.255"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEAPNWATQDSGFY"	"[R].sEAPNWATQDSGFY.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"Q641X8"	"Eukaryotic translation initiation factor 3 subunit E OS=Rattus norvegicus OX=10116 GN=Eif3e PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"901.41571"	"1801.82414"	"1801.82306"	"0.60"	"0.00054"	"6/132"	"6"	"132"	"127992.669555664"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"110.5817"	"39743"	"39743"	"39719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.3"	""	"4.7"	""	"3.5"	""	"5.4"	""	"6.9"	"5.2"	""	"349"	"24"	"32.000"	"25.000"	"0.063211403223714"	"14"	"0.0001991"	"0.002878"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9103"	"0.0000"	"1"	"1"	"1"	"601.30548"	"1801.90189"	"1801.90304"	"-0.64"	"-0.00038"	"14/122"	"14"	"122"	"55694860.6746216"	"HCD"	"MS2"	"2.381817"	"298.3"	"69.001"	"43.6335"	"12736"	"12736"	"12716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"364.0"	""	"242.4"	""	"286.9"	""	"654.8"	"1.6"	"693.0"	"594.2"	""	"803"	"78"	"36.000"	"29.000"	"7.00947594397583E-07"	"24"	"0"	"2.599E-11"	"2.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8493"	"0.0000"	"1"	"1"	"1"	"901.45471"	"1801.90215"	"1801.90304"	"-0.50"	"-0.00045"	"20/122"	"20"	"122"	"725720.962280273"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"43.4493"	"12696"	"12696"	"12667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.4"	""	"30.3"	""	"31.6"	""	"84.7"	""	"78.0"	"68.0"	""	"823"	"73"	"36.000"	"29.000"	"2.05764211143026E-06"	"28"	"0"	"7.972E-10"	"1.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"601.30560"	"1801.90226"	"1801.90304"	"-0.44"	"-0.00026"	"13/122"	"13"	"122"	"5936963.04626465"	"HCD"	"MS2"	"3.751124"	"84.2"	"100.000"	"44.2395"	"12983"	"12983"	"12961"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"108.5"	""	"90.6"	""	"99.1"	""	"151.9"	"0.2"	"181.2"	"168.1"	""	"807"	"74"	"36.000"	"29.000"	"1.77355041829163E-06"	"20"	"0"	"6.854E-09"	"1.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9157"	"0.0000"	"1"	"1"	"1"	"601.30560"	"1801.90226"	"1801.90304"	"-0.44"	"-0.00026"	"14/122"	"14"	"122"	"42962002.0367432"	"HCD"	"MS2"	"4.210403"	"214.3"	"59.523"	"43.4196"	"12684"	"12684"	"12667"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"260.3"	""	"171.8"	""	"218.0"	""	"463.8"	""	"476.1"	"450.5"	""	"807"	"83"	"36.000"	"29.000"	"2.103020659309E-07"	"25"	"0"	"2.448E-11"	"2.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9024"	"0.0000"	"1"	"1"	"1"	"901.45477"	"1801.90227"	"1801.90304"	"-0.43"	"-0.00039"	"20/122"	"20"	"122"	"495057.216186523"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"43.7412"	"12815"	"12815"	"12794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.9"	""	"16.3"	""	"24.2"	""	"54.8"	""	"59.2"	"61.7"	""	"807"	"41"	"36.000"	"29.000"	"0.00301192074018462"	"19"	"0"	"2.867E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.8488"	"0.0000"	"1"	"1"	"1"	"901.45490"	"1801.90251"	"1801.90304"	"-0.29"	"-0.00026"	"13/122"	"13"	"122"	"305119.278869629"	"HCD"	"MS2"	"0"	"18.0"	"100.000"	"43.9843"	"12879"	"12879"	"12851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"14.5"	""	"14.3"	""	"38.5"	""	"47.0"	"36.3"	""	"809"	"86"	"36.000"	"29.000"	"1.05661926785448E-07"	""	"0"	"5.483E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"0.9221"	"0.0000"	"1"	"1"	"1"	"901.45520"	"1801.90312"	"1801.90304"	"0.05"	"0.00004"	"14/122"	"14"	"122"	"750532.790161133"	"HCD"	"MS2"	"0"	"37.6"	"100.000"	"43.6514"	"12744"	"12744"	"12716"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.9"	""	"24.4"	""	"33.7"	""	"83.6"	"1.2"	"97.8"	"74.2"	""	"812"	"77"	"36.000"	"29.000"	"8.82116678618681E-07"	"23"	"0"	"1.279E-10"	"1.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9649"	"0.0000"	"1"	"1"	"1"	"601.30603"	"1801.90354"	"1801.90304"	"0.28"	"0.00017"	"19/122"	"19"	"122"	"5672984.17004395"	"HCD"	"MS2"	"4.963212"	"93.7"	"100.000"	"44.0565"	"12944"	"12944"	"12922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"127.9"	""	"110.4"	""	"101.1"	""	"158.1"	"0.1"	"202.8"	"189.7"	""	"827"	"57"	"36.000"	"29.000"	"8.67911641878326E-05"	"18"	"0"	"5.186E-09"	"1.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"601.30695"	"1801.90628"	"1801.90304"	"1.80"	"0.00108"	"11/122"	"11"	"122"	"123299592.665039"	"HCD"	"MS2"	"1.777989"	"67.7"	"7.885"	"43.9177"	"12852"	"12852"	"12835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.1"	""	"52.7"	""	"60.5"	""	"146.9"	""	"166.9"	"142.3"	""	"832"	"75"	"36.000"	"29.000"	"1.21925159002413E-06"	"27"	"0"	"6.648E-10"	"1.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGGHGGEYGEEALQR"	"[K].iGGHGGEYGEEALQR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8765"	"0.0000"	"1"	"1"	"1"	"601.30756"	"1801.90812"	"1801.90304"	"2.82"	"0.00169"	"11/122"	"11"	"122"	"109540988.82666"	"HCD"	"MS2"	"1.895863"	"65.6"	"8.251"	"43.7297"	"12811"	"12811"	"12794"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.5"	""	"47.6"	""	"60.5"	""	"138.0"	"4.2"	"157.4"	"143.8"	""	"855"	"81"	"36.000"	"29.000"	"3.72336934706225E-07"	"28"	"0"	"1.922E-09"	"1.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKMPYTDAVIHEIQR.[F]"	""	"1"	"3"	"Q64583"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.1702"	"0.0000"	"1"	"1"	"1"	"601.32007"	"1801.94565"	"1801.92653"	"10.61"	"0.00637"	"18/160"	"18"	"160"	"1034170.55517578"	"HCD"	"MS2"	"34.0292"	"21.8"	"100.000"	"96.3199"	"34107"	"34107"	"34084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"25.6"	""	"27.4"	""	"32.3"	""	"40.0"	"48.4"	"NoQuanLabels"	"1017"	"47"	"37.000"	"30.000"	"0.00108465333833503"	""	"0"	"3.046E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKMPYTDAVIHEIQR.[F]"	""	"1"	"3"	"Q64583"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.0938"	"0.0000"	"1"	"1"	"1"	"601.32031"	"1801.94638"	"1801.92653"	"11.02"	"0.00662"	"15/160"	"15"	"160"	"1639238.97216797"	"HCD"	"MS2"	"8.564973"	"17.8"	"100.000"	"96.6044"	"34221"	"34221"	"34209"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.2"	""	"21.4"	""	"26.7"	""	"22.9"	""	"34.7"	"36.1"	"NoQuanLabels"	"1020"	"64"	"37.000"	"30.000"	"2.2520092815019E-05"	""	"0"	"9.409E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKMPYTDAVIHEIQR.[F]"	""	"1"	"3"	"Q64583"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.1633"	"0.0000"	"1"	"1"	"1"	"601.32031"	"1801.94638"	"1801.92653"	"11.02"	"0.00662"	"15/160"	"15"	"160"	"1685147.11889648"	"HCD"	"MS2"	"5.490062"	"18.0"	"100.000"	"96.5094"	"34151"	"34151"	"34135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"20.6"	""	"28.6"	""	"21.1"	""	"35.7"	"37.8"	"NoQuanLabels"	"1020"	"49"	"37.000"	"30.000"	"0.00059919775301916"	""	"0"	"3.773E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKMPYTDAVIHEIQR.[F]"	""	"1"	"3"	"Q64583"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.1667"	"0.0000"	"1"	"1"	"1"	"601.32050"	"1801.94693"	"1801.92653"	"11.32"	"0.00680"	"18/160"	"18"	"160"	"833422.039733887"	"HCD"	"MS2"	"22.46578"	"20.2"	"100.000"	"96.2027"	"34027"	"34027"	"34013"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"23.7"	""	"28.7"	""	"31.8"	""	"40.4"	"38.9"	"NoQuanLabels"	"1011"	"42"	"37.000"	"30.000"	"0.00333212404046004"	""	"0"	"5.349E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQAEAQQPVFNTLR"	"[R].aQAEAQQPVFNTLR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"2"	"2"	"0.6429"	"0.0000"	"1"	"1"	"1"	"901.49139"	"1801.97551"	"1801.97581"	"-0.17"	"-0.00015"	"5/144"	"5"	"144"	"101193.682250977"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"69.7990"	"23357"	"23357"	"23328"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.3"	""	"3.8"	""	"6.5"	""	"3.4"	""	"7.3"	"5.5"	""	"1071"	"14"	"37.000"	"30.000"	"2.05475229961115"	"18"	"0.009348"	"0.1213"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SHDGNLLVSADDFGK"	"[R].SHDGNLLVSADDFGk.[V]"	"K15(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"601.97321"	"1803.90506"	"1803.90746"	"-1.33"	"-0.00080"	"10/154"	"10"	"154"	"426070.111083984"	"HCD"	"MS2"	"32.05323"	"20.7"	"100.000"	"81.3642"	"28048"	"28048"	"28027"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.7"	""	"28.0"	""	"22.5"	""	"32.9"	"1.1"	"37.4"	"40.9"	""	"810"	"18"	"36.000"	"29.000"	"0.703809335643497"	"14"	"0.0001991"	"0.005226"	"0.3"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPAEQDLTTK"	"[R].eTLPAEQDLTTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"602.00806"	"1804.00962"	"1804.01042"	"-0.44"	"-0.00027"	"11/118"	"11"	"118"	"729544.562011719"	"HCD"	"MS2"	"13.51983"	"27.2"	"100.000"	"80.0436"	"27512"	"27512"	"27493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.7"	""	"28.9"	""	"36.6"	""	"41.5"	""	"58.4"	"53.0"	""	"1124"	"42"	"37.000"	"30.000"	"0.0036202312721953"	"16"	"0"	"0.0001039"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETLPAEQDLTTK"	"[R].eTLPAEQDLTTk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"602.00836"	"1804.01053"	"1804.01042"	"0.06"	"0.00004"	"11/118"	"11"	"118"	"916308.384399414"	"HCD"	"MS2"	"11.99835"	"28.0"	"100.000"	"80.1331"	"27576"	"27576"	"27554"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.7"	""	"27.4"	""	"40.0"	""	"49.7"	""	"52.7"	"49.4"	""	"1116"	"50"	"37.000"	"30.000"	"0.000595160635646484"	"24"	"0"	"1.32E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEmPGLMR.[M]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.0357"	"0.0000"	"1"	"1"	"1"	"602.30896"	"1804.91233"	"1804.91347"	"-0.63"	"-0.00038"	"6/128"	"6"	"128"	"277197.599487305"	"HCD"	"MS2"	"11.89578"	"6.3"	"100.000"	"105.0133"	"37582"	"37582"	"37560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"8.5"	""	"8.3"	""	"10.9"	""	"12.4"	"9.9"	""	"996"	"28"	"36.000"	"29.000"	"0.0873432489917198"	"21"	"0.0001991"	"0.004639"	"0.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEMPGLmR.[M]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	""	"0.0357"	"2"	"2"	"2"	"602.30896"	"1804.91233"	"1804.91347"	"-0.63"	"-0.00038"	"12/128"	"12"	"128"	"277197.599487305"	"HCD"	"MS2"	"11.89578"	"6.3"	"100.000"	"105.0133"	"37582"	"37582"	"37560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"8.5"	""	"8.3"	""	"10.9"	""	"12.4"	"9.9"	""	"996"	"27"	"36.000"	"29.000"	"0.0966561167041204"	"21"	"0"	"0.0003192"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDIAENEMPGLMR"	"[K].aLDIAENEMPGLmR.[M]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"602.30933"	"1804.91343"	"1804.91347"	"-0.03"	"-0.00002"	"8/128"	"8"	"128"	"192394.973693848"	"HCD"	"MS2"	"23.59578"	"6.2"	"100.000"	"105.3853"	"37748"	"37748"	"37731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"8.9"	""	"8.7"	""	"9.3"	""	"13.6"	"9.6"	""	"1016"	"14"	"37.000"	"30.000"	"1.90048178842203"	"22"	"0.002084"	"0.01878"	"0.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"902.97607"	"1804.94487"	"1804.94899"	"-2.28"	"-0.00206"	"6/128"	"6"	"128"	"86396.8262329102"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"98.6955"	"35066"	"35066"	"35041"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.9"	""	"6.0"	""	"4.3"	""	"6.9"	""	"4.3"	"10.6"	""	"1189"	"12"	"37.000"	"30.000"	"4.03786559590916"	"13"	"0.002559"	"0.02575"	"0.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILGADTSVDLEETGR"	"[R].iLGADTSVDLEETGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.7586"	"0.0000"	"1"	"1"	"1"	"902.97925"	"1804.95122"	"1804.94899"	"1.24"	"0.00112"	"10/128"	"10"	"128"	"128413.839477539"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"98.6674"	"35025"	"35025"	"35000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"4.3"	""	"7.7"	""	"6.2"	""	"13.7"	"7.8"	""	"1192"	"29"	"37.000"	"30.000"	"0.0805835247663789"	"22"	"0.0001991"	"0.004392"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"602.33380"	"1804.98685"	"1804.98791"	"-0.58"	"-0.00035"	"9/122"	"9"	"122"	"1619812.34863281"	"HCD"	"MS2"	"25.89688"	"43.8"	"100.000"	"71.6649"	"24146"	"24146"	"24123"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.2"	""	"49.3"	""	"57.1"	""	"63.4"	""	"85.5"	"86.6"	""	"1182"	"23"	"37.000"	"30.000"	"0.27076185504829"	"20"	"0"	"0.0001738"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"602.33386"	"1804.98703"	"1804.98791"	"-0.48"	"-0.00029"	"8/122"	"8"	"122"	"973062.77154541"	"HCD"	"MS2"	"40.97905"	"35.9"	"100.000"	"71.3706"	"23995"	"23995"	"23974"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.5"	""	"39.2"	""	"42.7"	""	"63.1"	""	"78.6"	"74.4"	""	"1210"	"21"	"37.000"	"30.000"	"0.518507896364373"	"23"	"0"	"0.0003743"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"902.99750"	"1804.98772"	"1804.98791"	"-0.10"	"-0.00009"	"5/122"	"5"	"122"	"106231.597351074"	"HCD"	"MS2"	"28.33612"	"7.7"	"100.000"	"71.7155"	"24167"	"24167"	"24139"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.9"	""	"7.2"	""	"11.0"	""	"10.9"	""	"16.0"	"15.5"	""	"1202"	"26"	"37.000"	"30.000"	"0.147868093009272"	"27"	"9.9E-05"	"0.0006982"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEESLMPSQAVK"	"[R].qEESLMPSQAVk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"Q641Z6"	"EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"3"	"902.99811"	"1804.98894"	"1804.98791"	"0.57"	"0.00052"	"6/122"	"6"	"122"	"75081.3436889648"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"71.4626"	"24033"	"24033"	"24005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.0"	""	"3.6"	""	"5.3"	""	"9.9"	""	"8.3"	"8.5"	""	"1229"	"9"	"37.000"	"30.000"	"7.80767787650649"	"14"	"0.008868"	"0.1129"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FVSTPVGADGSSAEPR"	"[R].fVSTPVGADGSSAEPR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"Q6TLK4"	"Rho GTPase-activating protein 27 OS=Rattus norvegicus OX=10116 GN=Arhgap27 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"903.46521"	"1805.92314"	"1805.92311"	"0.02"	"0.00002"	"5/142"	"5"	"142"	"69366.5833129883"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"65.8709"	"21765"	"21765"	"21739"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.4"	""	""	""	"4.0"	""	"4.7"	""	"4.8"	"5.1"	""	"974"	"4"	"36.000"	"29.000"	"18.686542855474"	"13"	"0.004634"	"0.05428"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILALAPTFEMNPMK"	"[K].iLALAPTFEMnPMK.[K]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"Q63198"	"Contactin-1 OS=Rattus norvegicus OX=10116 GN=Cntn1 PE=1 SV=2"	"Q63198"	"Contactin-1 OS=Rattus norvegicus OX=10116 GN=Cntn1 PE=1 SV=2"	"0"	"2"	"2"	"0.2500"	"0.0000"	"1"	"1"	"1"	"903.48871"	"1805.97014"	"1805.97428"	"-2.29"	"-0.00207"	"6/114"	"6"	"114"	"166980.01953125"	"HCD"	"MS2"	"22.34661"	"14.1"	"100.000"	"97.3959"	"34541"	"34541"	"34518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"20.1"	""	"19.0"	""	"11.3"	""	"27.3"	"28.5"	""	"1177"	"8"	"37.000"	"30.000"	"8.50641305083978"	"19"	"0.003317"	"0.03619"	"0.125"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAEDFAEQPIK"	"[R].sLAEDFAEQPIk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"602.67273"	"1806.00364"	"1806.00494"	"-0.72"	"-0.00043"	"9/108"	"9"	"108"	"1608626.41998291"	"HCD"	"MS2"	"27.11716"	"39.2"	"100.000"	"102.4511"	"36557"	"36557"	"36543"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.6"	""	"43.0"	""	"45.4"	""	"69.6"	""	"82.2"	"86.0"	""	"1163"	"27"	"37.000"	"30.000"	"0.119550038156478"	"20"	"0"	"1.724E-05"	"0.811"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"602.67291"	"1806.00418"	"1806.00494"	"-0.42"	"-0.00025"	"14/116"	"14"	"116"	"1238012.4901123"	"HCD"	"MS2"	"10.92149"	"35.8"	"100.000"	"100.9054"	"35932"	"35932"	"35915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"35.3"	""	"35.0"	""	"62.6"	""	"77.9"	"84.4"	""	"1158"	"44"	"37.000"	"30.000"	"0.00209738696083269"	"23"	"0"	"1.194E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAEDFAEQPIK"	"[R].sLAEDFAEQPIk.[D]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"Q63617"	"Hypoxia up-regulated protein 1 OS=Rattus norvegicus OX=10116 GN=Hyou1 PE=1 SV=1"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"602.67291"	"1806.00418"	"1806.00494"	"-0.42"	"-0.00025"	"5/108"	"5"	"108"	"1792451.82019043"	"HCD"	"MS2"	"32.98627"	"43.8"	"100.000"	"102.6569"	"36663"	"36663"	"36652"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.6"	""	"46.9"	""	"59.5"	""	"77.4"	"1.1"	"96.5"	"81.2"	""	"1158"	"29"	"37.000"	"30.000"	"0.0754533564723881"	"18"	"0"	"2.095E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.7419"	"0.0000"	"1"	"1"	"1"	"903.50604"	"1806.00481"	"1806.00494"	"-0.07"	"-0.00006"	"12/116"	"12"	"116"	"288090.304443359"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"100.9124"	"35935"	"35935"	"35915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.0"	""	"15.8"	""	"17.0"	""	"32.0"	""	"41.2"	"44.5"	""	"1151"	"31"	"37.000"	"30.000"	"0.0475384839981667"	"22"	"0.0001686"	"0.001575"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.6471"	"0.0000"	"1"	"1"	"1"	"602.67316"	"1806.00492"	"1806.00494"	"-0.01"	"-0.00001"	"13/116"	"13"	"116"	"1999169.99957275"	"HCD"	"MS2"	"5.735158"	"56.1"	"100.000"	"100.7845"	"35911"	"35911"	"35893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.5"	""	"47.1"	""	"60.0"	""	"118.5"	""	"118.7"	"119.2"	""	"1151"	"34"	"37.000"	"30.000"	"0.0251793971518574"	"26"	"0"	"0.0003186"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"602.67328"	"1806.00528"	"1806.00494"	"0.19"	"0.00012"	"13/116"	"13"	"116"	"1497229.56719971"	"HCD"	"MS2"	"19.55391"	"43.6"	"100.000"	"100.6009"	"35809"	"35809"	"35787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.5"	""	"49.1"	""	"40.3"	""	"84.2"	""	"95.1"	"86.2"	""	"1162"	"44"	"37.000"	"30.000"	"0.00226556294259072"	"24"	"0"	"4.336E-05"	"0.728"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"602.67346"	"1806.00583"	"1806.00494"	"0.50"	"0.00030"	"14/116"	"14"	"116"	"629444.712768555"	"HCD"	"MS2"	"9.297492"	"20.8"	"100.000"	"101.1031"	"36039"	"36039"	"36023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"18.5"	""	"21.7"	""	"34.4"	""	"53.1"	"42.8"	""	"1146"	"42"	"37.000"	"30.000"	"0.00362371990838573"	"22"	"0"	"3.262E-05"	"0.754"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.6944"	"0.0000"	"1"	"1"	"1"	"903.50671"	"1806.00615"	"1806.00494"	"0.67"	"0.00061"	"14/116"	"14"	"116"	"261933.671569824"	"HCD"	"MS2"	"0"	"20.5"	"100.000"	"100.7152"	"35883"	"35883"	"35862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.5"	""	"21.8"	""	"16.7"	""	"38.1"	"0.7"	"49.7"	"40.8"	""	"1152"	"36"	"37.000"	"30.000"	"0.0129247598809887"	"26"	"9.9E-05"	"0.0006705"	"0.484"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.7381"	"0.0000"	"1"	"1"	"1"	"903.50677"	"1806.00627"	"1806.00494"	"0.74"	"0.00067"	"16/116"	"16"	"116"	"337308.448730469"	"HCD"	"MS2"	"0"	"25.9"	"100.000"	"100.6101"	"35813"	"35813"	"35787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	""	"26.5"	""	"18.0"	""	"54.7"	"0.9"	"60.8"	"51.2"	""	"1152"	"42"	"37.000"	"30.000"	"0.00328414620833711"	"27"	"0"	"3.715E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQPILSEFQEK"	"[K].eQPILSEFQEk.[T]"	"N-Term(TMT6plex); K11(TMT6plex)"	"2"	"2"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"0"	"2"	"2"	"0.7667"	"0.0000"	"1"	"1"	"1"	"903.50714"	"1806.00701"	"1806.00494"	"1.15"	"0.00103"	"14/116"	"14"	"116"	"351785.040405273"	"HCD"	"MS2"	"0"	"24.6"	"100.000"	"101.0176"	"36005"	"36005"	"35988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"27.5"	""	"19.0"	""	"53.5"	"0.4"	"50.3"	"55.8"	""	"1132"	"30"	"37.000"	"30.000"	"0.059815871021493"	"22"	"9.9E-05"	"0.0007808"	"0.47"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVPTSTNANLNNANMSK"	"[K].qVPTSTNANLNnAnMSK.[A]"	"Q1(Deamidated); N12(Deamidated); N14(Deamidated)"	"1"	"1"	"P27732"	"Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus norvegicus OX=10116 GN=Cacna1d PE=1 SV=2"	"P27732"	"Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus norvegicus OX=10116 GN=Cacna1d PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"3"	"903.91022"	"1806.81316"	"1806.81743"	"-2.37"	"-0.00214"	"3/184"	"3"	"184"	"63680.6721191406"	"HCD"	"MS2"	"0"	"0.3"	"100.000"	"105.7744"	"37887"	"37887"	"37865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	""	""	""	""	""	""	""	"2.8"	"NoQuanLabels"	"311"	"2"	"31.000"	"24.000"	"10.9579772224391"	"13"	"0.007443"	"0.09499"	"0.034"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPDLVPMGDWTSR"	"[R].tSPDLVPmGDWTSR.[V]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"P18484"	"AP-2 complex subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Ap2a2 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"903.94763"	"1806.88799"	"1806.88937"	"-0.76"	"-0.00069"	"5/128"	"5"	"128"	"83491.9567871094"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"90.8989"	"31882"	"31882"	"31855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	""	""	"3.8"	""	"5.3"	""	"6.1"	"4.7"	""	"798"	"12"	"36.000"	"29.000"	"2.32259183890578"	"14"	"0.006777"	"0.08375"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESVGSMAK"	"[K].gILAADESVGSMAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"602.99762"	"1806.97831"	"1807.00356"	"-13.97"	"-0.00842"	"7/114"	"7"	"114"	"2644641.50695801"	"HCD"	"MS2"	"2.1244"	"92.0"	"100.000"	"85.8950"	"29905"	"29905"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.4"	""	"155.6"	""	"134.5"	""	"131.7"	"0.9"	"103.4"	"127.3"	""	"1207"	"19"	"37.000"	"30.000"	"0.790091290530142"	"16"	"0.0001991"	"0.001978"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GILAADESVGSMAK"	"[K].gILAADESVGSMAk.[R]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"P09117"	"Fructose-bisphosphate aldolase C OS=Rattus norvegicus OX=10116 GN=Aldoc PE=1 SV=3"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"602.99774"	"1806.97867"	"1807.00356"	"-13.77"	"-0.00829"	"6/114"	"6"	"114"	"2630690.75250244"	"HCD"	"MS2"	"8.378615"	"90.8"	"100.000"	"85.8496"	"29857"	"29857"	"29844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"261.0"	""	"137.2"	""	"131.9"	""	"127.1"	"6.7"	"83.0"	"105.4"	""	"1224"	"15"	"37.000"	"30.000"	"1.73281190142922"	"17"	"0.0001991"	"0.003794"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWNnLk.[G]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"1"	"1"	"603.32404"	"1807.95755"	"1807.95905"	"-0.83"	"-0.00050"	"10/104"	"10"	"104"	"660076.53302002"	"HCD"	"MS2"	"28.82701"	"26.6"	"100.000"	"89.4262"	"31329"	"31329"	"31316"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"31.4"	""	"35.0"	""	"48.3"	""	"53.5"	"43.7"	""	"1165"	"22"	"37.000"	"30.000"	"0.329834385864783"	"24"	"0.0001686"	"0.001449"	"0.415"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWnNLk.[G]"	"N-Term(TMT6plex); N9(Deamidated); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.5455"	"0.0000"	"1"	"2"	"2"	"603.32404"	"1807.95755"	"1807.95905"	"-0.83"	"-0.00050"	"10/104"	"10"	"104"	"660076.53302002"	"HCD"	"MS2"	"28.82701"	"26.6"	"100.000"	"89.4262"	"31329"	"31329"	"31316"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"31.4"	""	"35.0"	""	"48.3"	""	"53.5"	"43.7"	""	"1165"	"22"	"37.000"	"30.000"	"0.329834385864783"	"24"	"0.0001686"	"0.001479"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWNnLk.[G]"	"N-Term(TMT6plex); N10(Deamidated); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.3913"	"0.0000"	"1"	"1"	"1"	"603.32471"	"1807.95957"	"1807.95905"	"0.29"	"0.00017"	"9/104"	"9"	"104"	"672939.121154785"	"HCD"	"MS2"	"18.06817"	"29.5"	"100.000"	"89.6236"	"31369"	"31369"	"31352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.5"	""	"32.2"	""	"35.4"	""	"52.1"	"0.5"	"50.5"	"60.7"	""	"1199"	"23"	"37.000"	"30.000"	"0.311737599921843"	"27"	"0.0001991"	"0.002196"	"0.378"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASDSSINWNNLK"	"[K].aSDSSINWnNLk.[G]"	"N-Term(TMT6plex); N9(Deamidated); K12(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"0.3913"	"0.0000"	"1"	"2"	"2"	"603.32471"	"1807.95957"	"1807.95905"	"0.29"	"0.00017"	"9/104"	"9"	"104"	"672939.121154785"	"HCD"	"MS2"	"18.06817"	"29.5"	"100.000"	"89.6236"	"31369"	"31369"	"31352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.5"	""	"32.2"	""	"35.4"	""	"52.1"	"0.5"	"50.5"	"60.7"	""	"1199"	"23"	"37.000"	"30.000"	"0.311737599921843"	"27"	"0.0001991"	"0.003017"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEYEEAQDAIVK"	"[K].gEYEEAQDAIVk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"P54275"	"DNA mismatch repair protein Msh2 OS=Rattus norvegicus OX=10116 GN=Msh2 PE=2 SV=1"	"0"	"2"	"2"	"0.3158"	"0.0000"	"1"	"1"	"1"	"905.48297"	"1809.95867"	"1809.96347"	"-2.65"	"-0.00240"	"5/110"	"5"	"110"	"378370.661987305"	"HCD"	"MS2"	"36.92479"	"36.2"	"100.000"	"102.5066"	"36579"	"36579"	"36569"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"39.5"	""	"42.7"	""	"72.6"	"0.2"	"74.3"	"62.1"	""	"1195"	"19"	"37.000"	"30.000"	"0.798615821136499"	"27"	"0.0001991"	"0.005331"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEEVSNFQK"	"[K].eLEEEVSNFQk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"603.99182"	"1809.96091"	"1809.96347"	"-1.41"	"-0.00085"	"8/98"	"8"	"98"	"356047.155761719"	"HCD"	"MS2"	"16.50684"	"16.7"	"100.000"	"95.9717"	"33934"	"33934"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"15.6"	""	"19.2"	""	"28.9"	""	"37.2"	"39.1"	""	"1192"	"16"	"37.000"	"30.000"	"1.45964169213947"	"26"	"0.0009352"	"0.008111"	"0.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELEEEVSNFQK"	"[K].eLEEEVSNFQk.[K]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"B3GNI6"	"Septin-11 OS=Rattus norvegicus OX=10116 GN=Sept11 PE=1 SV=1"	"0"	"3"	"3"	"0.6129"	"0.0000"	"1"	"1"	"1"	"603.99243"	"1809.96274"	"1809.96347"	"-0.40"	"-0.00024"	"8/98"	"8"	"98"	"338893.882263184"	"HCD"	"MS2"	"16.32138"	"16.0"	"100.000"	"96.0544"	"34000"	"34000"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"12.1"	""	"22.9"	""	"24.8"	""	"33.6"	"40.7"	""	"1196"	"31"	"37.000"	"30.000"	"0.044637635752922"	"27"	"0.0001991"	"0.002364"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYGGVTVDELGK"	"[R].vDYGGVTVDELGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"905.50348"	"1809.99968"	"1809.99985"	"-0.09"	"-0.00008"	"18/112"	"18"	"112"	"333877.757202148"	"HCD"	"MS2"	"28.82572"	"28.2"	"100.000"	"102.2224"	"36466"	"36466"	"36443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.5"	""	"39.9"	""	"41.0"	""	"41.1"	"1.2"	"49.1"	"42.7"	""	"1081"	"76"	"37.000"	"30.000"	"1.34832844991267E-06"	"23"	"0"	"9.854E-09"	"1.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYGGVTVDELGK"	"[R].vDYGGVTVDELGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"0.6735"	"0.0000"	"1"	"1"	"1"	"604.00476"	"1809.99973"	"1809.99985"	"-0.07"	"-0.00004"	"7/112"	"7"	"112"	"853430.510498047"	"HCD"	"MS2"	"37.36767"	"25.8"	"100.000"	"102.3936"	"36558"	"36558"	"36543"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.2"	""	"33.9"	""	"36.4"	""	"42.4"	""	"53.1"	"36.8"	""	"1083"	"49"	"37.000"	"30.000"	"0.000694382010508235"	""	"0"	"6.644E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYGGVTVDELGK"	"[R].vDYGGVTVDELGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"604.00500"	"1810.00046"	"1809.99985"	"0.34"	"0.00020"	"9/112"	"9"	"112"	"1590487.32952881"	"HCD"	"MS2"	"16.77293"	"47.0"	"100.000"	"102.2132"	"36462"	"36462"	"36443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.4"	""	"65.8"	""	"66.1"	""	"75.7"	""	"80.8"	"85.9"	""	"1102"	"60"	"37.000"	"30.000"	"6.02769957815924E-05"	""	"0"	"5.314E-07"	"1.122"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYGGVTVDELGK"	"[R].vDYGGVTVDELGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"905.50397"	"1810.00066"	"1809.99985"	"0.45"	"0.00040"	"12/112"	"12"	"112"	"174667.82232666"	"HCD"	"MS2"	"38.81496"	"14.4"	"100.000"	"102.4050"	"36563"	"36563"	"36543"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.7"	""	"21.5"	""	"23.1"	""	"20.5"	""	"23.5"	"26.7"	""	"1101"	"33"	"37.000"	"30.000"	"0.0293600859965936"	"15"	"9.9E-05"	"0.0008574"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VDYGGVTVDELGK"	"[R].vDYGGVTVDELGk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"P31044"	"Phosphatidylethanolamine-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pebp1 PE=1 SV=3"	"0"	"2"	"2"	"0.9524"	"0.0000"	"1"	"1"	"1"	"905.50714"	"1810.00701"	"1809.99985"	"3.95"	"0.00358"	"11/112"	"11"	"112"	"269961.275085449"	"HCD"	"MS2"	"29.95115"	"26.6"	"100.000"	"102.6871"	"36675"	"36675"	"36660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.5"	""	"32.5"	""	"38.4"	""	"43.2"	"1.2"	"53.8"	"42.8"	""	"1048"	"21"	"37.000"	"30.000"	"0.460607798819383"	"14"	"0.0001991"	"0.004548"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMSHFEPSEYIR"	"[K].vAmSHFEPSEYIR.[Y]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.30438"	"1810.89859"	"1810.89954"	"-0.52"	"-0.00031"	"12/108"	"12"	"108"	"1600052.68792725"	"HCD"	"MS2"	"21.30162"	"24.1"	"100.000"	"67.6638"	"22490"	"22490"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"26.9"	""	"32.7"	""	"40.8"	""	"42.7"	"55.0"	""	"846"	"18"	"36.000"	"29.000"	"0.617078432096473"	"14"	"0"	"0.0002058"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEmTGLWR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"905.95300"	"1810.89873"	"1810.89954"	"-0.45"	"-0.00040"	"8/132"	"8"	"132"	"131584.943481445"	"HCD"	"MS2"	"11.92483"	"8.6"	"100.000"	"102.9633"	"36765"	"36765"	"36746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.4"	""	"11.1"	""	"11.3"	""	"20.5"	""	"18.8"	"13.5"	""	"841"	"15"	"36.000"	"29.000"	"1.26405508525517"	"15"	"0.001615"	"0.01316"	"0.217"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEmTGLWR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"905.95313"	"1810.89897"	"1810.89954"	"-0.31"	"-0.00028"	"10/132"	"10"	"132"	"911101.427429199"	"HCD"	"MS2"	"31.49867"	"52.3"	"100.000"	"102.9043"	"36763"	"36763"	"36746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"54.8"	""	"61.7"	""	"109.4"	""	"113.5"	"107.3"	""	"841"	"21"	"36.000"	"29.000"	"0.324912186032743"	"14"	"0.0001991"	"0.003352"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEmTGLWR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"604.30457"	"1810.89914"	"1810.89954"	"-0.22"	"-0.00013"	"12/132"	"12"	"132"	"597831.278564453"	"HCD"	"MS2"	"28.73038"	"14.2"	"100.000"	"102.8549"	"36721"	"36721"	"36699"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"16.9"	""	"17.8"	""	"26.3"	""	"32.4"	"25.3"	""	"843"	"24"	"36.000"	"29.000"	"0.16511920120093"	"16"	"0.0001991"	"0.002415"	"0.369"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEmTGLWR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"905.95349"	"1810.89971"	"1810.89954"	"0.09"	"0.00008"	"11/132"	"11"	"132"	"1200472.29418945"	"HCD"	"MS2"	"45.56823"	"86.5"	"100.000"	"102.6589"	"36641"	"36641"	"36625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"118.9"	""	"91.3"	""	"88.5"	""	"175.8"	""	"179.2"	"173.4"	""	"843"	"31"	"36.000"	"29.000"	"0.0348174995746781"	"14"	"0.001261"	"0.009898"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEmTGLWR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.30499"	"1810.90042"	"1810.89954"	"0.49"	"0.00030"	"13/132"	"13"	"132"	"1199784.61791992"	"HCD"	"MS2"	"49.13357"	"25.4"	"100.000"	"102.9825"	"36794"	"36794"	"36774"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"24.1"	""	"29.8"	""	"52.2"	""	"55.6"	"53.5"	""	"853"	"30"	"36.000"	"29.000"	"0.047634217517841"	"14"	"9.9E-05"	"0.0004707"	"0.515"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAMSHFEPSEYIR"	"[K].vAmSHFEPSEYIR.[Y]"	"N-Term(TMT6plex); M3(Oxidation)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.30518"	"1810.90097"	"1810.89954"	"0.79"	"0.00048"	"7/108"	"7"	"108"	"1617090.60211182"	"HCD"	"MS2"	"23.89328"	"28.3"	"100.000"	"67.7503"	"22556"	"22556"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"33.3"	""	"40.6"	""	"58.7"	""	"46.9"	"53.7"	""	"869"	"25"	"36.000"	"29.000"	"0.144208141806609"	"14"	"0"	"0.0002534"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYDIPAEMTGLWR"	"[R].nYDIPAEmTGLWR.[Y]"	"N-Term(TMT6plex); M8(Oxidation)"	"1"	"1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"Q9EPT8"	"Chloride intracellular channel protein 5 OS=Rattus norvegicus OX=10116 GN=Clic5 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"905.95416"	"1810.90105"	"1810.89954"	"0.84"	"0.00076"	"7/132"	"7"	"132"	"207066.938964844"	"HCD"	"MS2"	"8.50059"	"11.2"	"100.000"	"103.1836"	"36874"	"36874"	"36867"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"12.4"	""	"15.7"	""	"29.2"	""	"14.4"	"25.5"	""	"865"	"35"	"36.000"	"29.000"	"0.0127346235661796"	"15"	"0.0001991"	"0.005843"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEQVDNWMSK"	"[R].dTEQVDNWMSk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.30609"	"1810.90372"	"1810.90457"	"-0.47"	"-0.00028"	"10/112"	"10"	"112"	"596515.321411133"	"HCD"	"MS2"	"8.69013"	"26.8"	"100.000"	"91.3492"	"32064"	"32064"	"32042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"29.2"	""	"36.5"	""	"41.6"	"0.3"	"49.6"	"57.3"	""	"895"	"30"	"36.000"	"29.000"	"0.0424417262327151"	"14"	"9.9E-05"	"0.0004487"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DTEQVDNWMSK"	"[R].dTEQVDNWMSk.[Q]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"604.30646"	"1810.90482"	"1810.90457"	"0.14"	"0.00008"	"10/112"	"10"	"112"	"594381.044311523"	"HCD"	"MS2"	"16.33172"	"26.8"	"100.000"	"91.1244"	"32010"	"32010"	"31993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.4"	""	"26.6"	""	"31.8"	""	"38.5"	"0.3"	"53.5"	"63.1"	""	"892"	"39"	"36.000"	"29.000"	"0.00624215945867388"	"16"	"0"	"0.0003403"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHQLDIDNPQSIR"	"[R].fHQLDIDNPQSIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.65790"	"1811.95914"	"1811.96016"	"-0.56"	"-0.00034"	"7/128"	"7"	"128"	"1480045.45202637"	"HCD"	"MS2"	"28.99666"	"23.8"	"100.000"	"75.4410"	"25677"	"25677"	"25651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"24.7"	""	"32.7"	""	"55.1"	""	"38.4"	"38.7"	""	"1131"	"34"	"37.000"	"30.000"	"0.0234116816110558"	"15"	"0"	"1.999E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FHQLDIDNPQSIR"	"[R].fHQLDIDNPQSIR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"P47727"	"Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus OX=10116 GN=Cbr1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"604.65826"	"1811.96024"	"1811.96016"	"0.04"	"0.00003"	"9/128"	"9"	"128"	"1091254.28533936"	"HCD"	"MS2"	"37.20354"	"23.5"	"100.000"	"75.2348"	"25562"	"25562"	"25537"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.0"	""	"21.9"	""	"28.6"	""	"61.0"	"1.3"	"37.6"	"43.9"	""	"1124"	"34"	"37.000"	"30.000"	"0.0203580565110185"	"15"	"0"	"8.931E-06"	"0.87"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIEVLETDPHFR"	"[K].qVIEVLETDPHFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"604.66602"	"1811.98349"	"1811.98531"	"-1.00"	"-0.00061"	"10/130"	"10"	"130"	"231452.060546875"	"HCD"	"MS2"	"5.43339"	"6.6"	"100.000"	"101.1424"	"36055"	"36055"	"36037"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.6"	""	"8.1"	""	"8.9"	""	"11.5"	""	"13.0"	"15.6"	""	"1126"	"23"	"37.000"	"30.000"	"0.273847256804293"	"19"	"0"	"9.857E-05"	"0.655"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVIEVLETDPHFR"	"[K].qVIEVLETDPHFR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"Q9JI85"	"Nucleobindin-2 OS=Rattus norvegicus OX=10116 GN=Nucb2 PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"604.66730"	"1811.98734"	"1811.98531"	"1.12"	"0.00067"	"13/130"	"13"	"130"	"275937.301696777"	"HCD"	"MS2"	"25.33638"	"7.1"	"100.000"	"101.0208"	"35979"	"35979"	"35960"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.0"	""	"9.3"	""	"12.5"	""	"12.1"	""	"14.8"	"13.3"	""	"1143"	"43"	"37.000"	"30.000"	"0.00268544483067881"	"21"	"0"	"9.958E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ITLNGIYQFIMDR"	"[K].iTLNGIYQFIMDR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63246"	"Forkhead box protein C2 OS=Rattus norvegicus OX=10116 GN=Foxc2 PE=1 SV=2"	"Q63246"	"Forkhead box protein C2 OS=Rattus norvegicus OX=10116 GN=Foxc2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"5"	"605.00781"	"1813.00888"	"1812.98796"	"11.54"	"0.00698"	"3/134"	"3"	"134"	"527112.936706543"	"HCD"	"MS2"	"11.39387"	"10.9"	"100.000"	"102.1188"	"36448"	"36448"	"36430"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"13.2"	""	"13.3"	""	"22.8"	""	"19.0"	"24.1"	""	"1043"	"3"	"37.000"	"30.000"	"25.4832205397288"	"13"	"0.007681"	"0.09757"	"0.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.03217"	"1813.05705"	"1813.05837"	"-0.72"	"-0.00066"	"11/120"	"11"	"120"	"151073.890441895"	"HCD"	"MS2"	"0"	"12.7"	"100.000"	"76.5508"	"26097"	"26097"	"26077"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"17.8"	""	"20.2"	""	"21.9"	""	"20.7"	"24.9"	""	"685"	"27"	"35.000"	"28.000"	"0.0722205141352151"	"14"	"9.9E-05"	"0.0004937"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9153"	"0.0000"	"1"	"1"	"1"	"605.02399"	"1813.05741"	"1813.05837"	"-0.53"	"-0.00032"	"14/120"	"14"	"120"	"1324980.53149414"	"HCD"	"MS2"	"4.562815"	"38.3"	"100.000"	"76.6185"	"26156"	"26156"	"26137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"54.9"	""	"53.6"	""	"77.0"	""	"65.5"	"70.4"	""	"673"	"59"	"35.000"	"28.000"	"4.65570086524004E-05"	"22"	"0"	"3.648E-05"	"0.744"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9512"	"0.0000"	"1"	"1"	"1"	"605.02399"	"1813.05741"	"1813.05837"	"-0.53"	"-0.00032"	"12/120"	"12"	"120"	"1326376.82623291"	"HCD"	"MS2"	"6.516988"	"40.7"	"100.000"	"76.5118"	"26081"	"26081"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.6"	""	"49.6"	""	"54.5"	""	"74.0"	""	"78.6"	"78.6"	""	"673"	"41"	"35.000"	"28.000"	"0.00257623258225638"	"17"	"0"	"3.925E-06"	"0.943"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"2"	"2"	"0.7368"	"0.0000"	"1"	"1"	"1"	"907.03241"	"1813.05754"	"1813.05837"	"-0.46"	"-0.00041"	"7/120"	"7"	"120"	"96446.2412719727"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"76.7014"	"26190"	"26190"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"12.0"	""	"13.3"	""	"14.0"	""	"14.5"	"14.9"	""	"675"	"19"	"35.000"	"28.000"	"0.475634969467382"	"19"	"0.001951"	"0.01657"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"907.03375"	"1813.06023"	"1813.05837"	"1.03"	"0.00093"	"14/120"	"14"	"120"	"236306.396484375"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"76.2557"	"25977"	"25977"	"25952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"29.4"	""	"31.3"	""	"38.2"	""	"28.5"	"30.2"	""	"676"	"50"	"35.000"	"28.000"	"0.000315439953669383"	"16"	"0"	"7.625E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9362"	"0.0000"	"1"	"1"	"1"	"605.02515"	"1813.06089"	"1813.05837"	"1.39"	"0.00084"	"15/120"	"15"	"120"	"1231631.62371826"	"HCD"	"MS2"	"35.34334"	"40.4"	"100.000"	"76.3121"	"26031"	"26031"	"26014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.9"	""	"56.1"	""	"52.7"	""	"80.1"	""	"73.2"	"70.1"	""	"667"	"47"	"35.000"	"28.000"	"0.000623872493811994"	"18"	"0"	"6.847E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"907.03448"	"1813.06169"	"1813.05837"	"1.83"	"0.00166"	"12/120"	"12"	"120"	"190583.770263672"	"HCD"	"MS2"	"0"	"15.4"	"100.000"	"76.3281"	"26038"	"26038"	"26014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"25.1"	""	"22.2"	""	"29.8"	""	"28.4"	"24.0"	""	"667"	"39"	"35.000"	"28.000"	"0.00403734477539086"	"15"	"0"	"0.0002161"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALGQNPTNAEVLK"	"[R].aLGQNPTNAEVLk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"Q64119"	"Myosin light polypeptide 6 OS=Rattus norvegicus OX=10116 GN=Myl6 PE=1 SV=3"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"605.02551"	"1813.06198"	"1813.05837"	"1.99"	"0.00121"	"16/120"	"16"	"120"	"1287152.89361572"	"HCD"	"MS2"	"25.04299"	"41.6"	"100.000"	"76.2096"	"25958"	"25958"	"25936"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.2"	""	"51.9"	""	"59.0"	""	"85.8"	""	"65.8"	"73.2"	""	"666"	"40"	"35.000"	"28.000"	"0.00305804754629032"	"17"	"0"	"1.288E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLEVQEADEVK"	"[K].vPLEVQEADEVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"605.34808"	"1814.02970"	"1814.03115"	"-0.80"	"-0.00048"	"9/112"	"9"	"112"	"271712.752929688"	"HCD"	"MS2"	"25.32632"	"11.6"	"100.000"	"95.7381"	"33872"	"33872"	"33851"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.2"	""	"13.2"	""	"16.1"	""	"18.0"	""	"22.0"	"23.8"	""	"922"	"29"	"36.000"	"29.000"	"0.0599378175473347"	"18"	"0.0001991"	"0.002554"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VPLEVQEADEVK"	"[K].vPLEVQEADEVk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"605.34833"	"1814.03043"	"1814.03115"	"-0.40"	"-0.00024"	"11/112"	"11"	"112"	"468952.667236328"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"95.6091"	"33787"	"33787"	"33761"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.8"	""	"21.2"	""	"28.7"	""	"29.1"	""	"36.2"	"30.7"	""	"922"	"42"	"36.000"	"29.000"	"0.00322627160157048"	"22"	"0"	"1.904E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.7800"	"0.0000"	"1"	"1"	"1"	"908.02399"	"1815.04070"	"1815.04166"	"-0.53"	"-0.00048"	"17/110"	"17"	"110"	"401347.073913574"	"HCD"	"MS2"	"0"	"27.2"	"100.000"	"103.2827"	"36891"	"36891"	"36867"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.3"	""	"43.3"	""	"31.7"	""	"47.9"	""	"39.8"	"36.2"	""	"841"	"50"	"36.000"	"29.000"	"0.000456841974730976"	"27"	"0"	"4.865E-05"	"0.718"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"908.02460"	"1815.04192"	"1815.04166"	"0.14"	"0.00013"	"8/110"	"8"	"110"	"268514.97845459"	"HCD"	"MS2"	"51.16118"	"19.1"	"100.000"	"103.3290"	"36910"	"36910"	"36883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.4"	""	"34.9"	""	"18.2"	""	"30.8"	""	"35.4"	"31.7"	""	"835"	"14"	"36.000"	"29.000"	"1.590949812669"	"14"	"0.0001991"	"0.004328"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"908.02472"	"1815.04216"	"1815.04166"	"0.28"	"0.00025"	"11/110"	"11"	"110"	"353848.706481934"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"103.5591"	"37019"	"37019"	"36999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.4"	""	"44.1"	""	"30.8"	""	"58.2"	""	"41.9"	"36.2"	""	"832"	"25"	"36.000"	"29.000"	"0.142591399203323"	"18"	"0.0001991"	"0.003087"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.8205"	"0.0000"	"1"	"1"	"1"	"605.68561"	"1815.04227"	"1815.04166"	"0.34"	"0.00020"	"12/110"	"12"	"110"	"7716411.99475098"	"HCD"	"MS2"	"11.15826"	"157.3"	"100.000"	"103.3803"	"36931"	"36931"	"36914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"297.4"	""	"237.7"	""	"183.7"	""	"280.7"	"0.1"	"237.3"	"248.8"	""	"831"	"39"	"36.000"	"29.000"	"0.00555355437125047"	"22"	"0"	"3.604E-05"	"0.745"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.8592"	"0.0000"	"1"	"1"	"1"	"908.02478"	"1815.04228"	"1815.04166"	"0.35"	"0.00031"	"17/110"	"17"	"110"	"608181.715881348"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"103.5783"	"37011"	"37011"	"36994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"75.2"	""	"70.7"	""	"43.4"	""	"66.2"	""	"66.4"	"63.0"	""	"831"	"71"	"36.000"	"29.000"	"3.13740820594988E-06"	"27"	"0"	"2.507E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.8108"	"0.0000"	"1"	"1"	"1"	"605.68567"	"1815.04245"	"1815.04166"	"0.44"	"0.00027"	"11/110"	"11"	"110"	"1077620.02416992"	"HCD"	"MS2"	"7.409218"	"28.8"	"100.000"	"103.7083"	"37063"	"37063"	"37042"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.1"	""	"40.9"	""	"35.1"	""	"51.9"	"0.6"	"44.2"	"44.2"	""	"811"	"37"	"36.000"	"29.000"	"0.00762062969213726"	"22"	"0.0001991"	"0.00203"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"605.68573"	"1815.04264"	"1815.04166"	"0.54"	"0.00033"	"13/110"	"13"	"110"	"6642983.45843506"	"HCD"	"MS2"	"6.802413"	"130.9"	"100.000"	"103.6475"	"37055"	"37055"	"37040"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"241.0"	""	"204.9"	""	"146.6"	""	"234.1"	""	"207.7"	"204.5"	""	"831"	"34"	"36.000"	"29.000"	"0.0183895468716672"	"21"	"0.0001991"	"0.002902"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"605.68579"	"1815.04282"	"1815.04166"	"0.64"	"0.00039"	"11/110"	"11"	"110"	"1319654.043396"	"HCD"	"MS2"	"5.074152"	"31.9"	"100.000"	"103.9667"	"37184"	"37184"	"37166"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.4"	""	"52.7"	""	"41.3"	""	"47.8"	""	"50.6"	"56.4"	""	"830"	"35"	"36.000"	"29.000"	"0.01415950583231"	"17"	"0.0001991"	"0.002598"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDPIPNEQVFIK"	"[K].gDPIPNEQVFIk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"2"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626; Q6IE52"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1"	"0"	"2"	"2"	"0.8644"	"0.0000"	"1"	"1"	"1"	"908.02570"	"1815.04411"	"1815.04166"	"1.35"	"0.00123"	"16/110"	"16"	"110"	"626063.381408691"	"HCD"	"MS2"	"0"	"41.4"	"100.000"	"103.8445"	"37135"	"37135"	"37118"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"88.0"	""	"56.9"	""	"47.9"	""	"74.0"	""	"57.9"	"66.0"	""	"826"	"59"	"36.000"	"29.000"	"5.46953054035396E-05"	"24"	"0"	"5.575E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVTELNEPLSNEDR"	"[K].aVTELNEPLSNEDR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"P68511"	"14-3-3 protein eta OS=Rattus norvegicus OX=10116 GN=Ywhah PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"908.46564"	"1815.92400"	"1815.92859"	"-2.53"	"-0.00229"	"4/140"	"4"	"140"	"66584.814453125"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"68.0979"	"22698"	"22698"	"22668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.6"	""	"3.0"	""	"2.7"	""	"5.8"	""	"7.6"	"3.7"	""	"906"	"17"	"36.000"	"29.000"	"0.959617594267572"	"14"	"0.002189"	"0.02096"	"0.175"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REELITNWEQIR"	"[K].rEELITNWEQIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"606.00165"	"1815.99039"	"1815.99146"	"-0.59"	"-0.00036"	"8/124"	"8"	"124"	"740765.534606934"	"HCD"	"MS2"	"23.59276"	"20.1"	"100.000"	"89.3093"	"31243"	"31243"	"31225"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.6"	""	"26.2"	""	"22.3"	""	"31.4"	""	"36.9"	"45.5"	""	"1088"	"32"	"37.000"	"30.000"	"0.032255137657152"	"19"	"0"	"1.159E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REELITNWEQIR"	"[K].rEELITNWEQIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.6923"	"0.0000"	"1"	"1"	"1"	"606.00189"	"1815.99112"	"1815.99146"	"-0.19"	"-0.00011"	"12/124"	"12"	"124"	"341558.740783691"	"HCD"	"MS2"	"3.599657"	"11.3"	"100.000"	"89.5981"	"31358"	"31358"	"31341"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"14.4"	""	"14.3"	""	"18.8"	""	"20.6"	"22.6"	""	"1083"	"13"	"37.000"	"30.000"	"2.76438457486682"	"17"	"0.001217"	"0.009392"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"REELITNWEQIR"	"[K].rEELITNWEQIR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.6977"	"0.0000"	"1"	"1"	"1"	"606.00189"	"1815.99112"	"1815.99146"	"-0.19"	"-0.00011"	"8/124"	"8"	"124"	"680126.966064453"	"HCD"	"MS2"	"15.1425"	"15.9"	"100.000"	"89.2807"	"31271"	"31271"	"31254"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.0"	""	"21.8"	""	"21.3"	""	"22.5"	"1.6"	"26.9"	"28.2"	""	"1083"	"43"	"37.000"	"30.000"	"0.00283529636411184"	"28"	"0"	"1.818E-06"	"1.012"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLEPEGTVEIK"	"[R].gSVLEPEGTVEIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"908.52423"	"1816.04119"	"1816.04680"	"-3.09"	"-0.00281"	"7/114"	"7"	"114"	"81965.2155761719"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"93.7731"	"33077"	"33077"	"33049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"5.1"	""	"6.2"	""	"7.7"	""	"5.4"	"6.3"	""	"939"	"13"	"36.000"	"29.000"	"2.46965106570437"	"13"	"0.002166"	"0.02008"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSVLEPEGTVEIK"	"[R].gSVLEPEGTVEIk.[F]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"P11497"	"Acetyl-CoA carboxylase 1 OS=Rattus norvegicus OX=10116 GN=Acaca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"908.52802"	"1816.04875"	"1816.04680"	"1.08"	"0.00098"	"4/114"	"4"	"114"	"85057.0099487305"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"93.8705"	"33081"	"33081"	"33051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.5"	""	"8.9"	""	"9.4"	""	"7.8"	""	"6.9"	"9.9"	""	"936"	"14"	"36.000"	"29.000"	"1.81236577823317"	"13"	"0.002035"	"0.01857"	"0.186"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQAFEAELSANQSR"	"[K].hQAFEAELSANQSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"606.30908"	"1816.91269"	"1816.91394"	"-0.69"	"-0.00042"	"13/144"	"13"	"144"	"2391156.84387207"	"HCD"	"MS2"	"19.20575"	"87.3"	"100.000"	"41.1736"	"11738"	"11738"	"11719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.3"	""	"94.2"	""	"107.8"	""	"161.3"	""	"185.3"	"156.7"	""	"882"	"12"	"36.000"	"29.000"	"2.94061785223207"	"16"	"0"	"0.0003536"	"0.541"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HQAFEAELSANQSR"	"[K].hQAFEAELSANQSR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.30920"	"1816.91306"	"1816.91394"	"-0.48"	"-0.00029"	"17/144"	"17"	"144"	"2437697.65582275"	"HCD"	"MS2"	"31.85134"	"85.2"	"100.000"	"41.0301"	"11714"	"11714"	"11698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.5"	""	"104.1"	""	"97.8"	""	"153.6"	""	"186.3"	"155.8"	""	"883"	"11"	"36.000"	"29.000"	"3.77511953738588"	"13"	"9.9E-05"	"0.0006367"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8793"	"0.0000"	"1"	"1"	"1"	"908.99292"	"1816.97856"	"1816.98051"	"-1.07"	"-0.00097"	"10/136"	"10"	"136"	"237048.495422363"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"40.9305"	"11640"	"11640"	"11611"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"20.2"	""	"26.6"	""	"30.3"	""	"39.4"	"31.7"	""	"1183"	"58"	"37.000"	"30.000"	"9.9989581106699E-05"	"24"	"0"	"2.109E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"606.33142"	"1816.97971"	"1816.98051"	"-0.44"	"-0.00027"	"16/136"	"16"	"136"	"5300706.88153076"	"HCD"	"MS2"	"30.63262"	"144.7"	"100.000"	"40.8606"	"11646"	"11646"	"11624"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"210.5"	""	"174.2"	""	"188.0"	""	"251.8"	""	"295.5"	"254.5"	""	"1180"	"36"	"37.000"	"30.000"	"0.0135161191513299"	"23"	"0"	"6.368E-06"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"3"	"3"	"0.7667"	"0.0000"	"1"	"1"	"1"	"606.33154"	"1816.98008"	"1816.98051"	"-0.24"	"-0.00015"	"10/136"	"10"	"136"	"5033065.96270752"	"HCD"	"MS2"	"26.89406"	"130.7"	"100.000"	"40.9880"	"11663"	"11663"	"11642"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"196.8"	""	"171.8"	""	"165.2"	""	"213.8"	""	"259.3"	"233.5"	""	"1180"	"30"	"37.000"	"30.000"	"0.0630742378741368"	"22"	"0"	"1.378E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AQIGGPESEQSGAK"	"[R].aQIGGPESEQSGAk.[-]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"P42930"	"Heat shock protein beta-1 OS=Rattus norvegicus OX=10116 GN=Hspb1 PE=1 SV=1"	"0"	"2"	"2"	"0.8974"	"0.0000"	"1"	"1"	"1"	"908.99414"	"1816.98100"	"1816.98051"	"0.27"	"0.00025"	"13/136"	"13"	"136"	"262988.321105957"	"HCD"	"MS2"	"0"	"23.8"	"100.000"	"40.8376"	"11637"	"11637"	"11610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.8"	""	"27.4"	""	"33.2"	""	"40.4"	""	"51.7"	"41.8"	""	"1188"	"39"	"37.000"	"30.000"	"0.00680434687218649"	"19"	"0"	"5.582E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKmPYTDAVIHEIQR.[F]"	"M3(Oxidation)"	"1"	"3"	"Q64583"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.0909"	"0.0000"	"1"	"1"	"1"	"606.65137"	"1817.93955"	"1817.92144"	"9.96"	"0.00603"	"18/160"	"18"	"160"	"1274061.22210693"	"HCD"	"MS2"	"16.68908"	"18.2"	"100.000"	"78.3331"	"26842"	"26842"	"26823"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"19.4"	""	"22.0"	""	"30.7"	""	"36.7"	"34.9"	"NoQuanLabels"	"1113"	"55"	"37.000"	"30.000"	"0.000183005932582485"	""	"0"	"1.234E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TKMPYTDAVIHEIQR"	"[R].TKmPYTDAVIHEIQR.[F]"	"M3(Oxidation)"	"1"	"3"	"Q64583"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2"	"Q64583; P33272; P04167"	"Cytochrome P450 2B15 OS=Rattus norvegicus OX=10116 GN=Cyp2b15 PE=3 SV=2; Cytochrome P450 2B12 OS=Rattus norvegicus OX=10116 GN=Cyp2b12 PE=2 SV=1; Cytochrome P450 2B2 OS=Rattus norvegicus OX=10116 GN=Cyp2b2 PE=1 SV=2"	"1"	"3"	"3"	"0.1754"	"0.0000"	"1"	"1"	"1"	"606.65173"	"1817.94065"	"1817.92144"	"10.56"	"0.00640"	"13/160"	"13"	"160"	"1216078.85131836"	"HCD"	"MS2"	"8.667807"	"20.2"	"100.000"	"78.2414"	"26778"	"26778"	"26758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"23.5"	""	"31.7"	""	"34.3"	""	"34.2"	"39.5"	"NoQuanLabels"	"1117"	"57"	"37.000"	"30.000"	"0.000122468155639322"	""	"0.0001686"	"0.00125"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISHYEEQLVK"	"[R].nISHYEEQLVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"606.67676"	"1818.01572"	"1818.01617"	"-0.25"	"-0.00015"	"11/108"	"11"	"108"	"1451853.35540771"	"HCD"	"MS2"	"17.66009"	"44.3"	"100.000"	"71.0223"	"23885"	"23885"	"23863"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.4"	""	"60.8"	""	"56.2"	""	"75.0"	"1.5"	"85.0"	"82.8"	""	"1171"	"36"	"37.000"	"30.000"	"0.0151191334161656"	"20"	"0"	"8.194E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISHYEEQLVK"	"[R].nISHYEEQLVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"606.67676"	"1818.01572"	"1818.01617"	"-0.25"	"-0.00015"	"10/108"	"10"	"108"	"4006858.17333984"	"HCD"	"MS2"	"8.358462"	"99.1"	"100.000"	"71.1128"	"23890"	"23890"	"23870"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.6"	""	"129.9"	""	"134.2"	""	"154.4"	"0.4"	"191.4"	"208.7"	""	"1171"	"48"	"37.000"	"30.000"	"0.000898518243428987"	"25"	"0"	"1.378E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISHYEEQLVK"	"[R].nISHYEEQLVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.8222"	"0.0000"	"1"	"1"	"1"	"606.67688"	"1818.01609"	"1818.01617"	"-0.05"	"-0.00003"	"14/108"	"14"	"108"	"3915988.81738281"	"HCD"	"MS2"	"10.47795"	"100.6"	"100.000"	"71.3311"	"24010"	"24010"	"23996"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.7"	""	"122.2"	""	"140.3"	""	"153.3"	""	"202.6"	"198.3"	""	"1166"	"45"	"37.000"	"30.000"	"0.00195735029103643"	"23"	"0"	"6.354E-06"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NISHYEEQLVK"	"[R].nISHYEEQLVk.[M]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"P12368"	"cAMP-dependent protein kinase type II-alpha regulatory subunit OS=Rattus norvegicus OX=10116 GN=Prkar2a PE=1 SV=4"	"0"	"3"	"3"	"0.6250"	"0.0000"	"1"	"1"	"1"	"606.67737"	"1818.01755"	"1818.01617"	"0.76"	"0.00046"	"5/108"	"5"	"108"	"1091799.6875"	"HCD"	"MS2"	"17.40975"	"36.8"	"100.000"	"70.8177"	"23770"	"23770"	"23754"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"48.8"	""	"51.3"	""	"58.0"	"0.1"	"68.2"	"74.8"	""	"1140"	"24"	"37.000"	"30.000"	"0.207431570592508"	"23"	"0"	"0.0001927"	"0.595"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDTPPPPMDEK"	"[R].sFDTPPPPMDEk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"606.98279"	"1818.93381"	"1818.93481"	"-0.55"	"-0.00033"	"5/108"	"5"	"108"	"261340.660095215"	"HCD"	"MS2"	"49.91793"	"12.8"	"100.000"	"84.4982"	"29313"	"29313"	"29291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"15.2"	""	"16.6"	""	"17.9"	""	"16.1"	"30.1"	""	"1069"	"13"	"37.000"	"30.000"	"2.93729597076901"	"15"	"0.002166"	"0.01994"	"0.179"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SFDTPPPPMDEK"	"[R].sFDTPPPPMDEk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"P16290"	"Phosphoglycerate mutase 2 OS=Rattus norvegicus OX=10116 GN=Pgam2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"606.98358"	"1818.93619"	"1818.93481"	"0.76"	"0.00046"	"5/108"	"5"	"108"	"328340.979980469"	"HCD"	"MS2"	"8.182386"	"14.6"	"100.000"	"84.8163"	"29469"	"29469"	"29449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.0"	""	"17.7"	""	"17.5"	""	"20.1"	""	"21.8"	"32.9"	""	"1085"	"20"	"37.000"	"30.000"	"0.582639256195125"	"14"	"0.0001686"	"0.001352"	"0.421"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"606.99762"	"1818.97831"	"1818.97989"	"-0.87"	"-0.00053"	"11/138"	"11"	"138"	"277996.49432373"	"HCD"	"MS2"	"9.536337"	"7.0"	"100.000"	"104.4773"	"37390"	"37390"	"37373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.6"	""	"4.1"	""	"8.4"	""	"13.8"	""	"16.9"	"12.8"	""	"1188"	"21"	"37.000"	"30.000"	"0.512609257373581"	"18"	"0.0001686"	"0.001329"	"0.423"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"606.99762"	"1818.97831"	"1818.97989"	"-0.87"	"-0.00053"	"12/138"	"12"	"138"	"648906.104980469"	"HCD"	"MS2"	"24.12598"	"10.3"	"100.000"	"104.1611"	"37262"	"37262"	"37242"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"12.7"	""	"14.1"	""	"18.4"	""	"17.8"	"21.4"	""	"1188"	"54"	"37.000"	"30.000"	"0.000212220065862246"	"20"	"0"	"5.492E-06"	"0.913"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"606.99792"	"1818.97922"	"1818.97989"	"-0.37"	"-0.00022"	"11/138"	"11"	"138"	"314228.298156738"	"HCD"	"MS2"	"20.78548"	"8.6"	"100.000"	"104.2120"	"37266"	"37266"	"37249"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.8"	""	"10.7"	""	"9.5"	""	"13.4"	""	"17.0"	"18.0"	""	"1199"	"28"	"37.000"	"30.000"	"0.0974516479072415"	"16"	"9.9E-05"	"0.0008949"	"0.458"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"909.99365"	"1818.98003"	"1818.97989"	"0.07"	"0.00007"	"8/138"	"8"	"138"	"103806.220153809"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"104.4106"	"37363"	"37363"	"37343"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.4"	""	"7.0"	""	"8.8"	""	"8.2"	""	"7.6"	"5.8"	""	"1194"	"22"	"37.000"	"30.000"	"0.411125420917533"	"16"	"9.9E-05"	"0.0007"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"606.99823"	"1818.98014"	"1818.97989"	"0.13"	"0.00008"	"12/138"	"12"	"138"	"816274.326538086"	"HCD"	"MS2"	"14.90461"	"12.7"	"100.000"	"103.8976"	"37139"	"37139"	"37121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"16.7"	""	"20.0"	""	"17.4"	""	"21.5"	"29.1"	""	"1194"	"49"	"37.000"	"30.000"	"0.00081091312761253"	"16"	"0"	"0.0001009"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.6800"	"0.0000"	"1"	"1"	"1"	"909.99377"	"1818.98027"	"1818.97989"	"0.21"	"0.00019"	"9/138"	"9"	"138"	"143764.672180176"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"104.1127"	"37226"	"37226"	"37204"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"7.3"	""	"8.4"	""	"10.2"	""	"13.4"	"13.1"	""	"1194"	"25"	"37.000"	"30.000"	"0.193630751557561"	"22"	"9.9E-05"	"0.0004634"	"0.517"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVQELPLESDGALR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"909.99390"	"1818.98052"	"1818.97989"	"0.34"	"0.00031"	"11/138"	"11"	"138"	"120199.932922363"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"104.0984"	"37237"	"37237"	"37217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.3"	""	"10.7"	""	"5.7"	""	"9.2"	""	"5.6"	"7.7"	""	"1194"	"33"	"37.000"	"30.000"	"0.027288164920008"	"24"	"0"	"0.000318"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"910.01337"	"1819.01946"	"1819.02131"	"-1.02"	"-0.00093"	"6/118"	"6"	"118"	"132808.886657715"	"HCD"	"MS2"	"0"	"6.9"	"100.000"	"87.8241"	"30646"	"30646"	"30627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.6"	""	"14.9"	""	"4.7"	""	"11.1"	""	"15.4"	"10.5"	""	"1134"	"9"	"37.000"	"30.000"	"8.00908787801102"	"14"	"0.009382"	"0.1228"	"0.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"607.01166"	"1819.02042"	"1819.02131"	"-0.49"	"-0.00030"	"12/118"	"12"	"118"	"1124910.13220215"	"HCD"	"MS2"	"9.843688"	"32.0"	"100.000"	"88.1496"	"30775"	"30775"	"30760"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.4"	""	"36.0"	""	"36.4"	""	"55.6"	"1.2"	"63.7"	"63.1"	""	"1103"	"36"	"37.000"	"30.000"	"0.0151197815581823"	"20"	"0"	"3.696E-06"	"0.949"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"910.01392"	"1819.02056"	"1819.02131"	"-0.42"	"-0.00038"	"6/118"	"6"	"118"	"67656.4732666016"	"HCD"	"MS2"	"0"	"4.7"	"100.000"	"88.1366"	"30809"	"30809"	"30783"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.0"	""	"6.8"	""	"3.2"	""	"8.0"	""	"9.1"	"10.8"	""	"1101"	"9"	"37.000"	"30.000"	"7.47751552346228"	"14"	"0.004959"	"0.0627"	"0.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"607.01184"	"1819.02097"	"1819.02131"	"-0.19"	"-0.00012"	"14/118"	"14"	"118"	"888631.864074707"	"HCD"	"MS2"	"7.200839"	"28.4"	"100.000"	"88.0813"	"30786"	"30786"	"30768"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.7"	""	"34.4"	""	"39.2"	""	"54.1"	"1.6"	"50.7"	"49.3"	""	"1093"	"25"	"37.000"	"30.000"	"0.155808148319089"	"19"	"0"	"2.71E-05"	"0.77"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8966"	"0.0000"	"1"	"1"	"1"	"910.01422"	"1819.02117"	"1819.02131"	"-0.08"	"-0.00007"	"11/118"	"11"	"118"	"145988.189880371"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"87.8185"	"30680"	"30680"	"30650"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"15.7"	""	"10.5"	""	"20.7"	""	"19.5"	"15.8"	""	"1093"	"29"	"37.000"	"30.000"	"0.0727093339425027"	"17"	"0.0001991"	"0.005404"	"0.297"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"607.01202"	"1819.02152"	"1819.02131"	"0.11"	"0.00007"	"12/118"	"12"	"118"	"1272900.54315186"	"HCD"	"MS2"	"10.19223"	"34.2"	"100.000"	"87.8681"	"30664"	"30664"	"30647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.3"	""	"41.7"	""	"38.1"	""	"63.1"	"1.2"	"73.7"	"56.4"	""	"1112"	"35"	"37.000"	"30.000"	"0.0186670113519083"	"25"	"0"	"2.971E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"3"	"3"	"0.6389"	"0.0000"	"1"	"1"	"1"	"607.01202"	"1819.02152"	"1819.02131"	"0.11"	"0.00007"	"11/118"	"11"	"118"	"1318116.46673584"	"HCD"	"MS2"	"13.95087"	"38.6"	"100.000"	"87.7567"	"30654"	"30654"	"30635"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.9"	""	"47.1"	""	"47.0"	""	"65.8"	""	"78.0"	"70.5"	""	"1112"	"36"	"37.000"	"30.000"	"0.0142914005521949"	"27"	"0"	"4.079E-06"	"0.94"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPADLVTVTDQK"	"[K].sSPADLVTVTDQk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"P97697"	"Inositol monophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Impa1 PE=1 SV=2"	"0"	"2"	"2"	"0.8276"	"0.0000"	"1"	"1"	"1"	"910.01471"	"1819.02214"	"1819.02131"	"0.46"	"0.00041"	"11/118"	"11"	"118"	"100302.43548584"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"88.1266"	"30766"	"30766"	"30751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"8.9"	""	"8.4"	""	"14.2"	""	"15.4"	"16.2"	""	"1107"	"29"	"37.000"	"30.000"	"0.075182649268599"	"19"	"0.00212"	"0.01952"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVQELPLESDGALR"	"[R].yVqELPLESDGALR.[Y]"	"N-Term(TMT6plex); Q3(Deamidated)"	"1"	"1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"Q75WE7"	"von Willebrand factor A domain-containing protein 5A OS=Rattus norvegicus OX=10116 GN=Vwa5a PE=2 SV=1"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"910.49475"	"1819.98223"	"1819.96391"	"10.06"	"0.00916"	"8/138"	"8"	"138"	"125993.504516602"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"103.8122"	"37105"	"37105"	"37082"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"6.8"	""	"7.1"	""	"10.3"	""	"11.8"	"11.1"	""	"1271"	"20"	"38.000"	"31.000"	"0.68252027154286"	"14"	"0.009312"	"0.121"	"0.01"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGHSMSDPGVSYR"	"[R].yHGHSMSDPGVSYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"456.21854"	"1821.85232"	"1821.85398"	"-0.91"	"-0.00042"	"11/118"	"11"	"118"	"2135778.06774902"	"HCD"	"MS2"	"10.30672"	"54.8"	"100.000"	"31.1664"	"7688"	"7688"	"7668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.9"	""	"72.0"	""	"74.5"	""	"75.4"	"1.2"	"103.1"	"104.7"	""	"487"	"28"	"33.000"	"26.000"	"0.0406910564584658"	"14"	"0"	"3.41E-06"	"0.956"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGHSMSDPGVSYR"	"[R].yHGHSMSDPGVSYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"456.21866"	"1821.85280"	"1821.85398"	"-0.65"	"-0.00029"	"14/118"	"14"	"118"	"3696016.05841064"	"HCD"	"MS2"	"8.943272"	"55.3"	"100.000"	"30.9292"	"7630"	"7630"	"7609"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"95.8"	""	"79.0"	""	"79.4"	""	"76.6"	""	"94.7"	"98.0"	""	"495"	"33"	"33.000"	"26.000"	"0.0137586303674425"	"15"	"0"	"1.088E-06"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGHSMSDPGVSYR"	"[R].yHGHSMSDPGVSYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.95605"	"1821.85361"	"1821.85398"	"-0.20"	"-0.00012"	"8/118"	"8"	"118"	"644936.23840332"	"HCD"	"MS2"	"0"	"17.6"	"100.000"	"30.8970"	"7617"	"7617"	"7595"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.9"	""	"24.3"	""	"22.7"	""	"33.6"	""	"33.9"	"34.1"	""	"504"	"25"	"34.000"	"27.000"	"0.0834450426136129"	"14"	"0"	"0.0001129"	"0.643"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YHGHSMSDPGVSYR"	"[R].yHGHSMSDPGVSYR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"P26284"	"Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pdha1 PE=1 SV=2"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"607.95660"	"1821.85526"	"1821.85398"	"0.70"	"0.00043"	"9/118"	"9"	"118"	"530268.586181641"	"HCD"	"MS2"	"41.49804"	"17.0"	"100.000"	"31.1365"	"7676"	"7676"	"7652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"20.4"	""	"21.3"	""	"30.0"	""	"34.3"	"36.5"	""	"527"	"18"	"34.000"	"27.000"	"0.440332376870871"	"15"	"0"	"0.0001068"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.49005"	"1821.97283"	"1821.97470"	"-1.03"	"-0.00094"	"17/138"	"17"	"138"	"333284.629516602"	"HCD"	"MS2"	"0"	"25.7"	"100.000"	"60.4442"	"19562"	"19562"	"19540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.4"	""	"39.3"	""	"33.4"	""	"40.8"	""	"37.3"	"45.5"	""	"1157"	"65"	"37.000"	"30.000"	"1.70334791515258E-05"	"17"	"0"	"2.622E-07"	"1.185"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.9500"	"0.0000"	"1"	"1"	"1"	"911.49036"	"1821.97344"	"1821.97470"	"-0.69"	"-0.00063"	"9/138"	"9"	"138"	"199894.225952148"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"60.3241"	"19547"	"19547"	"19525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.3"	""	"19.4"	""	"20.4"	""	"26.3"	""	"22.4"	"27.9"	""	"1152"	"60"	"37.000"	"30.000"	"5.19304975261031E-05"	"19"	"0"	"7.881E-07"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"607.99622"	"1821.97409"	"1821.97470"	"-0.33"	"-0.00020"	"15/138"	"15"	"138"	"5479682.20874023"	"HCD"	"MS2"	"22.5091"	"143.1"	"100.000"	"60.6785"	"19690"	"19690"	"19673"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"203.3"	""	"184.9"	""	"203.0"	""	"219.9"	""	"256.8"	"290.5"	""	"1151"	"41"	"37.000"	"30.000"	"0.0042271273112442"	"19"	"0"	"1.036E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.99652"	"1821.97501"	"1821.97470"	"0.17"	"0.00010"	"15/138"	"15"	"138"	"6303699.78192139"	"HCD"	"MS2"	"31.25753"	"180.1"	"100.000"	"60.5087"	"19589"	"19589"	"19572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"230.7"	""	"216.3"	""	"231.0"	""	"306.3"	""	"353.4"	"372.6"	""	"1153"	"43"	"37.000"	"30.000"	"0.00283008390601975"	"15"	"0"	"5.721E-07"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8730"	"0.0000"	"1"	"1"	"1"	"911.49115"	"1821.97502"	"1821.97470"	"0.18"	"0.00016"	"19/138"	"19"	"138"	"755636.163024902"	"HCD"	"MS2"	"0"	"56.9"	"100.000"	"60.6096"	"19662"	"19662"	"19644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"93.0"	""	"78.1"	""	"78.2"	""	"82.3"	"0.7"	"92.1"	"113.7"	""	"1153"	"63"	"37.000"	"30.000"	"2.94984578188988E-05"	"24"	"0"	"1.403E-07"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"607.99658"	"1821.97519"	"1821.97470"	"0.27"	"0.00016"	"9/138"	"9"	"138"	"4215616.83416748"	"HCD"	"MS2"	"28.07941"	"117.4"	"100.000"	"60.8079"	"19711"	"19711"	"19695"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"161.3"	""	"143.5"	""	"154.5"	""	"192.7"	"2.6"	"224.0"	"235.1"	""	"1154"	"37"	"37.000"	"30.000"	"0.0107442427785448"	"19"	"0"	"1.51E-06"	"1.028"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"607.99658"	"1821.97519"	"1821.97470"	"0.27"	"0.00016"	"15/138"	"15"	"138"	"5437262.94671631"	"HCD"	"MS2"	"33.83411"	"171.6"	"100.000"	"60.3978"	"19576"	"19576"	"19564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"214.4"	""	"209.4"	""	"228.8"	""	"276.1"	""	"333.8"	"366.8"	""	"1154"	"39"	"37.000"	"30.000"	"0.00748472439357743"	"15"	"0"	"7.029E-06"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYNGAAPTEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8676"	"0.0000"	"1"	"1"	"1"	"911.49127"	"1821.97527"	"1821.97470"	"0.31"	"0.00028"	"18/138"	"18"	"138"	"467799.165588379"	"HCD"	"MS2"	"0"	"36.8"	"100.000"	"60.7778"	"19698"	"19698"	"19679"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.6"	""	"40.5"	""	"58.5"	""	"55.3"	""	"66.4"	"68.3"	""	"1153"	"68"	"37.000"	"30.000"	"9.45800004249536E-06"	"26"	"0"	"1.181E-07"	"1.256"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"911.98169"	"1822.95610"	"1822.95871"	"-1.43"	"-0.00131"	"4/138"	"4"	"138"	"66221.8780517578"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"66.8292"	"22183"	"22183"	"22164"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.5"	""	"4.2"	""	"3.8"	""	"5.6"	""	"5.3"	"8.1"	""	"1065"	"13"	"37.000"	"30.000"	"2.78175970642031"	"13"	"0.005673"	"0.07079"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5135"	"0.0000"	"1"	"1"	"1"	"911.98181"	"1822.95635"	"1822.95871"	"-1.30"	"-0.00118"	"14/138"	"14"	"138"	"214112.256408691"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"61.7589"	"20127"	"20127"	"20102"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"21.7"	""	"24.4"	""	"25.0"	""	"36.7"	"25.3"	""	"1068"	"37"	"37.000"	"30.000"	"0.00967255609458867"	"20"	"0"	"0.0002128"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.1111"	"0.0000"	"1"	"1"	"1"	"608.32379"	"1822.95682"	"1822.95871"	"-1.04"	"-0.00063"	"14/138"	"14"	"138"	"1487215.80651855"	"HCD"	"MS2"	"0"	"42.9"	"100.000"	"66.6219"	"22067"	"22067"	"22051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.2"	""	"51.5"	""	"54.3"	""	"69.1"	""	"76.6"	"95.8"	""	"1068"	"45"	"37.000"	"30.000"	"0.00169645075372698"	"24"	"0"	"3.224E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5273"	"0.0000"	"1"	"1"	"1"	"911.98212"	"1822.95696"	"1822.95871"	"-0.96"	"-0.00088"	"9/138"	"9"	"138"	"255466.889465332"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"66.4762"	"22043"	"22043"	"22024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.4"	""	"23.0"	""	"24.3"	""	"28.6"	""	"40.2"	"34.4"	""	"1072"	"55"	"37.000"	"30.000"	"0.000182039146108459"	"17"	"0"	"3.509E-06"	"0.953"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.4769"	"0.0000"	"1"	"1"	"1"	"911.98218"	"1822.95708"	"1822.95871"	"-0.90"	"-0.00082"	"9/138"	"9"	"138"	"160486.69140625"	"HCD"	"MS2"	"0"	"12.6"	"100.000"	"66.3330"	"21953"	"21953"	"21938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"16.3"	""	"20.8"	""	"19.8"	""	"20.5"	"22.9"	""	"1071"	"65"	"37.000"	"30.000"	"1.53730300167422E-05"	"19"	"0"	"2.15E-06"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.0238"	"0.0000"	"1"	"1"	"1"	"608.32410"	"1822.95774"	"1822.95871"	"-0.54"	"-0.00033"	"15/138"	"15"	"138"	"1923478.60552979"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"66.4122"	"22017"	"22017"	"22004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.7"	""	"72.6"	""	"80.7"	""	"91.0"	"2.4"	"103.2"	"123.2"	""	"1070"	"42"	"37.000"	"30.000"	"0.00316485474283879"	"22"	"0"	"1.499E-05"	"0.823"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dInAYNGAAPTEk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0238"	"2"	"2"	"2"	"608.32410"	"1822.95774"	"1822.95871"	"-0.54"	"-0.00033"	"15/138"	"15"	"138"	"1923478.60552979"	"HCD"	"MS2"	"0"	"58.6"	"100.000"	"66.4122"	"22017"	"22017"	"22004"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.7"	""	"72.6"	""	"80.7"	""	"91.0"	"2.4"	"103.2"	"123.2"	""	"1070"	"41"	"37.000"	"30.000"	"0.00399350085749386"	"22"	"0"	"0.0001056"	"0.649"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.4259"	"0.0000"	"1"	"1"	"1"	"911.98260"	"1822.95793"	"1822.95871"	"-0.43"	"-0.00039"	"14/138"	"14"	"138"	"251090.420043945"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"61.8325"	"20124"	"20124"	"20100"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"26.2"	""	"29.1"	""	"27.1"	""	"32.0"	"33.8"	""	"1069"	"54"	"37.000"	"30.000"	"0.00019406522027462"	"22"	"0"	"1.255E-05"	"0.839"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	"0.0222"	"0.0000"	"1"	"1"	"1"	"608.32428"	"1822.95829"	"1822.95871"	"-0.24"	"-0.00014"	"14/138"	"14"	"138"	"1464092.03039551"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"66.3215"	"21948"	"21948"	"21938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"61.8"	""	"58.8"	""	"63.6"	"0.4"	"80.9"	"82.3"	""	"1069"	"45"	"37.000"	"30.000"	"0.00166321238218317"	"19"	"0"	"1.922E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dInAYNGAAPTEk.[L]"	"N-Term(TMT6plex); N3(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0222"	"2"	"2"	"2"	"608.32428"	"1822.95829"	"1822.95871"	"-0.24"	"-0.00014"	"14/138"	"14"	"138"	"1464092.03039551"	"HCD"	"MS2"	"0"	"43.2"	"100.000"	"66.3215"	"21948"	"21948"	"21938"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.0"	""	"61.8"	""	"58.8"	""	"63.6"	"0.4"	"80.9"	"82.3"	""	"1069"	"44"	"37.000"	"30.000"	"0.0020938603331411"	"19"	"0"	"0.0001192"	"0.638"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5571"	"0.0000"	"1"	"1"	"1"	"911.98328"	"1822.95928"	"1822.95871"	"0.31"	"0.00028"	"17/138"	"17"	"138"	"381837.826477051"	"HCD"	"MS2"	"0"	"29.1"	"100.000"	"62.0906"	"20261"	"20261"	"20239"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.9"	""	"33.2"	""	"41.6"	""	"41.6"	""	"55.3"	"54.5"	""	"1075"	"70"	"37.000"	"30.000"	"5.9071563869498E-06"	"25"	"0"	"1.074E-06"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"0.5833"	"0.0000"	"1"	"1"	"1"	"911.98370"	"1822.96013"	"1822.95871"	"0.78"	"0.00071"	"9/138"	"9"	"138"	"315464.108032227"	"HCD"	"MS2"	"0"	"25.3"	"100.000"	"62.1290"	"20243"	"20243"	"20224"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.7"	""	"31.4"	""	"33.2"	""	"39.6"	"0.8"	"51.8"	"31.7"	""	"1078"	"60"	"37.000"	"30.000"	"5.67007449990717E-05"	"24"	"0"	"5.345E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DINAYNGAAPTEK"	"[K].dINAYnGAAPTEk.[L]"	"N-Term(TMT6plex); N6(Deamidated); K13(TMT6plex)"	"1"	"1"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"O35244"	"Peroxiredoxin-6 OS=Rattus norvegicus OX=10116 GN=Prdx6 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"911.98450"	"1822.96172"	"1822.95871"	"1.65"	"0.00150"	"5/138"	"5"	"138"	"91186.0441894531"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"63.1333"	"20653"	"20653"	"20625"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.0"	""	"3.6"	""	"5.4"	""	"1.7"	""	"8.3"	"7.2"	""	"1075"	"8"	"37.000"	"30.000"	"8.53843877371306"	"13"	"0.009411"	"0.1241"	"0.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAMEGAGTDEK"	"[K].kAMEGAGTDEk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"608.67560"	"1824.01224"	"1824.01401"	"-0.97"	"-0.00059"	"9/112"	"9"	"112"	"1874609.0614624"	"HCD"	"MS2"	"13.44218"	"120.3"	"100.000"	"35.3463"	"9375"	"9375"	"9358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"258.7"	""	"185.9"	""	"205.5"	""	"108.6"	""	"168.9"	"207.7"	""	"1062"	"37"	"37.000"	"30.000"	"0.010164698961862"	"20"	"0"	"3.822E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KAMEGAGTDEK"	"[K].kAMEGAGTDEk.[A]"	"N-Term(TMT6plex); K1(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"1"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"608.67572"	"1824.01261"	"1824.01401"	"-0.77"	"-0.00047"	"11/112"	"11"	"112"	"2318768.31665039"	"HCD"	"MS2"	"6.752424"	"141.8"	"100.000"	"35.1672"	"9340"	"9340"	"9326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"310.7"	""	"239.6"	""	"240.0"	""	"130.3"	"0.1"	"213.0"	"203.3"	""	"1052"	"31"	"37.000"	"30.000"	"0.04305124785589"	"16"	"0"	"9.31E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDAQDLYEAGEK"	"[R].qDAQDLYEAGEk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"P55260"	"Annexin A4 OS=Rattus norvegicus OX=10116 GN=Anxa4 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"912.97266"	"1824.93804"	"1824.93798"	"0.03"	"0.00003"	"6/128"	"6"	"128"	"90541.0687866211"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"64.9351"	"21417"	"21417"	"21388"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"6.1"	""	"7.8"	""	"8.6"	""	"13.3"	"10.3"	""	"981"	"10"	"36.000"	"29.000"	"5.07737232756218"	"13"	"0.007379"	"0.09319"	"0.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEDELGHPEK"	"[K].vLTEDELGHPEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"609.00745"	"1825.00779"	"1825.01075"	"-1.62"	"-0.00099"	"8/104"	"8"	"104"	"1881846.71173096"	"HCD"	"MS2"	"32.34846"	"71.3"	"100.000"	"65.4751"	"21603"	"21603"	"21583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.6"	""	"82.9"	""	"93.0"	""	"117.0"	"0.8"	"141.2"	"141.3"	""	"1031"	"48"	"37.000"	"30.000"	"0.000807660176640751"	"24"	"0"	"2.102E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VLTEDELGHPEK"	"[K].vLTEDELGHPEk.[G]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"P05369"	"Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"609.00769"	"1825.00852"	"1825.01075"	"-1.22"	"-0.00074"	"11/104"	"11"	"104"	"1411577.23254395"	"HCD"	"MS2"	"17.24834"	"63.5"	"100.000"	"65.4760"	"21637"	"21637"	"21616"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"73.9"	""	"66.6"	""	"76.5"	""	"116.3"	"0.8"	"130.4"	"138.6"	""	"1022"	"33"	"37.000"	"30.000"	"0.0257288811090619"	"21"	"0"	"2.646E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFRK"	"[K].dIISDTSGEFRk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"609.33997"	"1826.00534"	"1826.00600"	"-0.36"	"-0.00022"	"13/106"	"13"	"106"	"1720850.72412109"	"HCD"	"MS2"	"2.068669"	"78.5"	"100.000"	"78.1836"	"26782"	"26782"	"26765"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"167.5"	""	"109.7"	""	"125.1"	""	"128.0"	""	"90.9"	"118.0"	""	"1088"	"29"	"37.000"	"30.000"	"0.0722102585004979"	"14"	"0"	"1.07E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DIISDTSGEFRK"	"[K].dIISDTSGEFRk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"Q07936"	"Annexin A2 OS=Rattus norvegicus OX=10116 GN=Anxa2 PE=1 SV=2"	"1"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"609.34070"	"1826.00754"	"1826.00600"	"0.84"	"0.00051"	"7/106"	"7"	"106"	"1261154.3850708"	"HCD"	"MS2"	"6.83936"	"68.9"	"100.000"	"78.1145"	"26727"	"26727"	"26710"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"128.0"	""	"105.3"	""	"108.2"	""	"114.6"	""	"88.4"	"105.9"	""	"1065"	"12"	"37.000"	"30.000"	"3.60014184396231"	"16"	"0.001348"	"0.01118"	"0.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.32568"	"1828.96250"	"1828.96424"	"-0.96"	"-0.00058"	"13/140"	"13"	"140"	"1578171.45776367"	"HCD"	"MS2"	"26.59676"	"34.6"	"100.000"	"102.3587"	"36520"	"36520"	"36512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.1"	""	"46.2"	""	"44.6"	""	"61.7"	""	"63.0"	"64.3"	""	"1045"	"33"	"37.000"	"30.000"	"0.0267970073135488"	"15"	"0"	"3.174E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"914.98529"	"1828.96330"	"1828.96424"	"-0.51"	"-0.00047"	"12/140"	"12"	"140"	"230063.621765137"	"HCD"	"MS2"	"0"	"11.2"	"100.000"	"102.2616"	"36482"	"36482"	"36459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"21.9"	""	"20.5"	""	"13.9"	""	"13.0"	"15.9"	""	"1055"	"40"	"37.000"	"30.000"	"0.00472304913827411"	"20"	"0"	"1.888E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vQEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"914.98608"	"1828.96489"	"1828.96424"	"0.35"	"0.00032"	"12/140"	"12"	"140"	"209131.040283203"	"HCD"	"MS2"	"10.31663"	"9.6"	"100.000"	"102.4720"	"36590"	"36590"	"36566"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.7"	""	"20.1"	""	"13.5"	""	"15.1"	""	"14.6"	"14.2"	""	"1075"	"34"	"37.000"	"30.000"	"0.0210076981488416"	"15"	"0"	"3.493E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"610.33252"	"1828.98301"	"1828.98453"	"-0.84"	"-0.00051"	"13/106"	"13"	"106"	"1387931.41357422"	"HCD"	"MS2"	"16.69671"	"42.9"	"100.000"	"78.9097"	"27077"	"27077"	"27062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"55.0"	""	"49.1"	""	"52.3"	""	"80.0"	"0.2"	"89.6"	"81.4"	""	"1082"	"35"	"37.000"	"30.000"	"0.0154952028171946"	"18"	"0"	"0.0001448"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"610.33295"	"1828.98429"	"1828.98453"	"-0.14"	"-0.00008"	"13/106"	"13"	"106"	"2180112.53533936"	"HCD"	"MS2"	"11.70885"	"60.0"	"100.000"	"79.2022"	"27197"	"27197"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.7"	""	"73.8"	""	"77.3"	""	"98.8"	""	"129.9"	"119.6"	""	"1055"	"35"	"37.000"	"30.000"	"0.0182063322499664"	"17"	"0"	"5.893E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.9655"	"0.0000"	"1"	"1"	"1"	"914.99585"	"1828.98442"	"1828.98453"	"-0.06"	"-0.00006"	"8/106"	"8"	"106"	"147847.427001953"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"79.2643"	"27222"	"27222"	"27196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.2"	""	"13.2"	""	"12.1"	""	"21.7"	""	"33.6"	"32.4"	""	"1066"	"58"	"37.000"	"30.000"	"8.88642764289716E-05"	"19"	"0"	"1.176E-05"	"0.845"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"914.99597"	"1828.98467"	"1828.98453"	"0.07"	"0.00007"	"6/106"	"6"	"106"	"135609.463684082"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"79.1308"	"27141"	"27141"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"12.1"	""	"13.4"	""	"21.8"	""	"29.2"	"28.0"	""	"1063"	"39"	"37.000"	"30.000"	"0.00611650406723967"	"18"	"0.0001686"	"0.001274"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.8158"	"0.0000"	"1"	"1"	"1"	"610.33319"	"1828.98502"	"1828.98453"	"0.26"	"0.00016"	"8/106"	"8"	"106"	"1650746.3536377"	"HCD"	"MS2"	"14.00693"	"49.2"	"100.000"	"79.1104"	"27132"	"27132"	"27115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.9"	""	"52.4"	""	"61.5"	""	"85.1"	"2.0"	"104.4"	"96.9"	""	"1062"	"38"	"37.000"	"30.000"	"0.00931310546477975"	"22"	"0"	"5.362E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.9167"	"0.0000"	"1"	"1"	"1"	"914.99622"	"1828.98516"	"1828.98453"	"0.34"	"0.00031"	"6/106"	"6"	"106"	"130826.298095703"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"78.8011"	"27007"	"27007"	"26977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.3"	""	"12.6"	""	"10.2"	""	"25.7"	""	"26.6"	"25.0"	""	"1096"	"36"	"37.000"	"30.000"	"0.0123248192399801"	"18"	"0"	"0.0003192"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"610.33350"	"1828.98594"	"1828.98453"	"0.77"	"0.00047"	"10/106"	"10"	"106"	"1518052.57843018"	"HCD"	"MS2"	"16.5231"	"51.8"	"100.000"	"78.8197"	"27014"	"27014"	"26993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.4"	""	"54.9"	""	"68.3"	""	"93.3"	""	"109.8"	"101.6"	""	"1081"	"33"	"37.000"	"30.000"	"0.0273398229812683"	"17"	"0"	"0.0001267"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QYQEAYEQALK"	"[K].qYQEAYEQALk.[A]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"0.9388"	"0.0000"	"1"	"1"	"1"	"914.99689"	"1828.98650"	"1828.98453"	"1.07"	"0.00098"	"13/106"	"13"	"106"	"135033.68951416"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"78.9255"	"27084"	"27084"	"27062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.0"	""	"10.3"	""	"10.4"	""	"23.1"	""	"28.8"	"21.4"	""	"1071"	"49"	"37.000"	"30.000"	"0.000697845809861206"	"18"	"0"	"5.954E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQEVEVPEDFGPVR"	"[K].vqEVEVPEDFGPVR.[T]"	"N-Term(TMT6plex); Q2(Deamidated)"	"1"	"1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"Q6P6T4"	"Echinoderm microtubule-associated protein-like 2 OS=Rattus norvegicus OX=10116 GN=Eml2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.66046"	"1829.96683"	"1829.94826"	"10.15"	"0.00619"	"12/140"	"12"	"140"	"851961.749450684"	"HCD"	"MS2"	"58.51084"	"19.9"	"100.000"	"102.4675"	"36588"	"36588"	"36566"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"28.1"	""	"24.7"	""	"33.9"	"1.5"	"35.1"	"39.5"	""	"1068"	"17"	"37.000"	"30.000"	"1.08527864383994"	"14"	"0.0007633"	"0.007339"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLPVDEGSPLEK"	"[K].sTLPVDEGSPLEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"915.51624"	"1830.02519"	"1830.02607"	"-0.48"	"-0.00044"	"11/118"	"11"	"118"	"280237.287902832"	"HCD"	"MS2"	"0"	"21.2"	"100.000"	"88.9446"	"31097"	"31097"	"31073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"15.8"	""	"21.0"	""	"48.1"	""	"45.7"	"47.2"	""	"1080"	"20"	"37.000"	"30.000"	"0.59209822591732"	"20"	"0.001718"	"0.01505"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLPVDEGSPLEK"	"[K].sTLPVDEGSPLEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"610.68005"	"1830.02561"	"1830.02607"	"-0.25"	"-0.00015"	"16/118"	"16"	"118"	"2133412.36193848"	"HCD"	"MS2"	"2.516675"	"50.6"	"100.000"	"88.8235"	"31087"	"31087"	"31068"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.7"	""	"50.4"	""	"64.8"	""	"103.3"	""	"113.5"	"104.9"	""	"1080"	"21"	"37.000"	"30.000"	"0.391195418440495"	"15"	"0"	"3.027E-05"	"0.761"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLPVDEGSPLEK"	"[K].sTLPVDEGSPLEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.7727"	"0.0000"	"1"	"1"	"1"	"610.68030"	"1830.02634"	"1830.02607"	"0.15"	"0.00009"	"7/118"	"7"	"118"	"2046326.03613281"	"HCD"	"MS2"	"5.4352"	"49.8"	"100.000"	"88.9655"	"31106"	"31106"	"31089"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.8"	""	"47.0"	""	"53.1"	""	"101.8"	"0.3"	"115.8"	"106.2"	""	"1080"	"22"	"37.000"	"30.000"	"0.348653283678714"	"18"	"0"	"1.972E-05"	"0.799"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"STLPVDEGSPLEK"	"[K].sTLPVDEGSPLEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"2"	"2"	"0.9200"	"0.0000"	"1"	"1"	"1"	"915.51709"	"1830.02690"	"1830.02607"	"0.46"	"0.00042"	"13/118"	"13"	"118"	"292437.878662109"	"HCD"	"MS2"	"0"	"24.2"	"100.000"	"88.7842"	"31071"	"31071"	"31052"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"17.1"	""	"30.2"	""	"48.4"	"0.9"	"54.8"	"52.3"	""	"1080"	"25"	"37.000"	"30.000"	"0.178810805600599"	"16"	"0.0001991"	"0.003051"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.97980"	"1830.95232"	"1830.95474"	"-1.32"	"-0.00121"	"9/158"	"9"	"158"	"234029.772155762"	"HCD"	"MS2"	"0"	"11.7"	"100.000"	"76.4734"	"26097"	"26097"	"26074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"19.0"	""	"16.2"	""	"18.5"	""	"16.9"	"13.9"	""	"1076"	"60"	"37.000"	"30.000"	"5.30618363269592E-05"	"16"	"0"	"3.303E-07"	"1.164"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.97998"	"1830.95268"	"1830.95474"	"-1.12"	"-0.00103"	"11/158"	"11"	"158"	"253204.194030762"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"76.3801"	"26028"	"26028"	"26000"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.8"	""	"21.2"	""	"18.7"	""	"19.9"	""	"20.5"	"22.3"	""	"1076"	"73"	"37.000"	"30.000"	"3.01843811105469E-06"	"17"	"0"	"6.792E-08"	"1.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.98004"	"1830.95281"	"1830.95474"	"-1.06"	"-0.00097"	"5/158"	"5"	"158"	"57425.6985473633"	"HCD"	"MS2"	"100"	"3.6"	"100.000"	"77.1020"	"26350"	"26350"	"26334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.5"	""	"7.4"	""	"6.1"	""	"4.3"	""	"5.9"	"6.0"	""	"1076"	"3"	"37.000"	"30.000"	"29.6334540666107"	"13"	"0.001049"	"0.008692"	"0.254"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.98920"	"1830.95304"	"1830.95474"	"-0.93"	"-0.00057"	"16/158"	"16"	"158"	"1774117.22924805"	"HCD"	"MS2"	"21.05565"	"25.1"	"100.000"	"76.4711"	"26096"	"26096"	"26074"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"41.4"	""	"36.6"	""	"37.7"	""	"46.4"	"46.0"	""	"1082"	"60"	"37.000"	"30.000"	"5.69111373738363E-05"	"16"	"0"	"3.46E-07"	"1.16"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"610.98969"	"1830.95450"	"1830.95474"	"-0.13"	"-0.00008"	"16/158"	"16"	"158"	"2145976.49530029"	"HCD"	"MS2"	"9.112424"	"29.5"	"100.000"	"76.3986"	"26035"	"26035"	"26016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.6"	""	"41.7"	""	"41.5"	""	"49.7"	""	"50.2"	"52.2"	""	"1111"	"57"	"37.000"	"30.000"	"0.000111862382079856"	"16"	"0"	"3.397E-07"	"1.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"610.98975"	"1830.95469"	"1830.95474"	"-0.03"	"-0.00002"	"18/158"	"18"	"158"	"6472963.37469482"	"HCD"	"MS2"	"3.067083"	"43.9"	"100.000"	"76.7774"	"26220"	"26220"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"71.5"	""	"74.8"	""	"58.6"	""	"63.6"	"1.5"	"75.7"	"70.1"	""	"1112"	"76"	"37.000"	"30.000"	"1.35542281501303E-06"	"22"	"0"	"8.699E-08"	"1.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9359"	"0.0000"	"1"	"1"	"1"	"610.98975"	"1830.95469"	"1830.95474"	"-0.03"	"-0.00002"	"19/158"	"19"	"158"	"6594116.13183594"	"HCD"	"MS2"	"3.57088"	"44.4"	"100.000"	"76.6935"	"26155"	"26155"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.9"	""	"63.1"	""	"60.9"	""	"69.0"	"0.6"	"78.1"	"65.0"	""	"1112"	"78"	"37.000"	"30.000"	"9.12167913898944E-07"	"22"	"0"	"7.701E-08"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.8434"	"0.0000"	"1"	"1"	"1"	"915.98108"	"1830.95488"	"1830.95474"	"0.08"	"0.00007"	"12/158"	"12"	"158"	"1909104.03863525"	"HCD"	"MS2"	"0"	"79.5"	"100.000"	"76.6982"	"26157"	"26157"	"26136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"157.4"	""	"118.1"	""	"117.2"	""	"111.1"	"0.6"	"121.8"	"124.0"	""	"1112"	"83"	"37.000"	"30.000"	"2.76741819248288E-07"	""	"0"	"1.179E-09"	"1.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTQEFGPVPDTAR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9592"	"0.0000"	"1"	"1"	"1"	"915.98114"	"1830.95500"	"1830.95474"	"0.14"	"0.00013"	"11/158"	"11"	"158"	"1422918.82733154"	"HCD"	"MS2"	"0"	"65.1"	"100.000"	"76.7797"	"26221"	"26221"	"26206"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"113.2"	""	"100.4"	""	"96.1"	""	"93.6"	""	"102.9"	"109.4"	""	"1106"	"49"	"37.000"	"30.000"	"0.000680338630259247"	"18"	"0"	"7.228E-07"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"915.99463"	"1830.98198"	"1830.98327"	"-0.70"	"-0.00064"	"12/128"	"12"	"128"	"563022.768066406"	"HCD"	"MS2"	"0"	"23.0"	"100.000"	"110.5523"	"39744"	"39744"	"39724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.0"	""	"42.2"	""	"43.0"	""	"17.2"	"0.7"	"37.5"	"34.7"	""	"1154"	"65"	"37.000"	"30.000"	"1.65263068863609E-05"	"29"	"0"	"1.041E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8548"	"0.0000"	"1"	"1"	"1"	"610.99908"	"1830.98270"	"1830.98327"	"-0.31"	"-0.00019"	"14/128"	"14"	"128"	"2606800.3772583"	"HCD"	"MS2"	"4.57479"	"24.3"	"100.000"	"110.5916"	"39760"	"39760"	"39740"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"38.4"	""	"45.5"	""	"21.5"	""	"49.2"	"40.6"	""	"1153"	"62"	"37.000"	"30.000"	"3.39468367312497E-05"	"26"	"0"	"1.613E-06"	"1.023"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"915.99573"	"1830.98418"	"1830.98327"	"0.50"	"0.00046"	"11/128"	"11"	"128"	"772514.266235352"	"HCD"	"MS2"	"24.21878"	"29.1"	"100.000"	"110.4338"	"39683"	"39683"	"39655"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.2"	""	"49.5"	""	"41.8"	""	"29.5"	""	"52.4"	"52.1"	""	"1142"	"42"	"37.000"	"30.000"	"0.0033161648240467"	"21"	"0"	"1.456E-05"	"0.826"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"610.99969"	"1830.98453"	"1830.98327"	"0.69"	"0.00042"	"14/128"	"14"	"128"	"2740775.19702148"	"HCD"	"MS2"	"4.437712"	"22.7"	"100.000"	"110.4455"	"39688"	"39688"	"39671"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.2"	""	"39.2"	""	"41.4"	""	"22.5"	""	"34.7"	"39.5"	""	"1144"	"59"	"37.000"	"30.000"	"6.97262050585024E-05"	"24"	"0"	"2.839E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPNTQVEILPQGR"	"[R].ySPNTQVEILPQGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.00134"	"1830.98948"	"1830.99113"	"-0.90"	"-0.00055"	"11/136"	"11"	"136"	"642892.595703125"	"HCD"	"MS2"	"32.78085"	"15.0"	"100.000"	"84.5460"	"29361"	"29361"	"29335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"18.6"	""	"19.3"	""	"24.4"	""	"27.8"	"33.5"	""	"1148"	"27"	"37.000"	"30.000"	"0.116657292427739"	"14"	"0"	"0.0001983"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPNTQVEILPQGR"	"[R].ySPNTQVEILPQGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"0.9355"	"0.0000"	"1"	"1"	"1"	"611.00134"	"1830.98948"	"1830.99113"	"-0.90"	"-0.00055"	"11/136"	"11"	"136"	"676580.284667969"	"HCD"	"MS2"	"40.09089"	"15.8"	"100.000"	"84.5905"	"29350"	"29350"	"29334"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.8"	""	"19.6"	""	"20.0"	""	"26.2"	""	"30.3"	"35.3"	""	"1148"	"31"	"37.000"	"30.000"	"0.0467640259027962"	"17"	"0"	"2.73E-06"	"0.976"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPNTQVEILPQGR"	"[R].ySPNTQVEILPQGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"611.00177"	"1830.99076"	"1830.99113"	"-0.20"	"-0.00012"	"13/136"	"13"	"136"	"501636.145996094"	"HCD"	"MS2"	"32.90025"	"11.8"	"100.000"	"84.8624"	"29487"	"29487"	"29471"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"14.3"	""	"19.1"	""	"21.5"	""	"22.9"	"22.0"	""	"1164"	"37"	"37.000"	"30.000"	"0.0119928660952314"	"15"	"0"	"2.683E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSPNTQVEILPQGR"	"[R].ySPNTQVEILPQGR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"Q6AYC4"	"Macrophage-capping protein OS=Rattus norvegicus OX=10116 GN=Capg PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"915.99988"	"1830.99248"	"1830.99113"	"0.74"	"0.00068"	"4/136"	"4"	"136"	"101002.565307617"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"84.6199"	"29391"	"29391"	"29367"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"7.8"	""	"8.1"	""	"8.5"	""	"7.0"	"8.4"	""	"1169"	"10"	"37.000"	"30.000"	"5.60769669121063"	"13"	"0.002525"	"0.02407"	"0.162"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9038"	"0.0000"	"1"	"1"	"1"	"611.01129"	"1831.01932"	"1831.02131"	"-1.09"	"-0.00066"	"13/130"	"13"	"130"	"2434034.0993042"	"HCD"	"MS2"	"29.71303"	"57.6"	"100.000"	"88.0053"	"30755"	"30755"	"30739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.5"	""	"64.4"	""	"88.5"	""	"92.7"	"0.6"	"105.1"	"111.7"	""	"1079"	"52"	"37.000"	"30.000"	"0.000309735831360853"	"21"	"0"	"1.081E-05"	"0.853"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8654"	"0.0000"	"1"	"1"	"1"	"611.01141"	"1831.01969"	"1831.02131"	"-0.89"	"-0.00054"	"13/130"	"13"	"130"	"2643143.45532227"	"HCD"	"MS2"	"21.81631"	"59.9"	"100.000"	"88.1196"	"30763"	"30763"	"30751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.2"	""	"67.3"	""	"85.0"	""	"93.0"	""	"121.5"	"125.3"	""	"1097"	"52"	"37.000"	"30.000"	"0.000309155254220536"	"23"	"0"	"5.447E-06"	"0.914"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"916.01361"	"1831.01995"	"1831.02131"	"-0.75"	"-0.00068"	"17/130"	"17"	"130"	"331321.363830566"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"88.1311"	"30768"	"30768"	"30751"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"35.9"	""	"34.9"	""	"45.8"	""	"53.0"	"57.9"	""	"1085"	"65"	"37.000"	"30.000"	"1.80883828924055E-05"	"22"	"0"	"1.355E-06"	"1.038"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.8986"	"0.0000"	"1"	"1"	"1"	"916.01379"	"1831.02031"	"1831.02131"	"-0.55"	"-0.00050"	"10/130"	"10"	"130"	"1529187.76220703"	"HCD"	"MS2"	"0"	"108.3"	"100.000"	"88.3279"	"30887"	"30887"	"30873"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"141.2"	""	"107.5"	""	"158.3"	""	"166.6"	"0.8"	"211.3"	"241.9"	""	"1086"	"69"	"37.000"	"30.000"	"6.69575924443298E-06"	"24"	"0"	"3.615E-08"	"1.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"0.9277"	"0.0000"	"1"	"1"	"1"	"916.01398"	"1831.02068"	"1831.02131"	"-0.35"	"-0.00032"	"12/130"	"12"	"130"	"1334779.50250244"	"HCD"	"MS2"	"0"	"95.8"	"100.000"	"88.4374"	"30891"	"30891"	"30875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"121.0"	""	"106.2"	""	"137.1"	""	"140.3"	""	"185.4"	"220.7"	""	"1077"	"83"	"37.000"	"30.000"	"2.60726819944037E-07"	"23"	"0"	"1.578E-09"	"1.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"611.01208"	"1831.02170"	"1831.02131"	"0.21"	"0.00013"	"9/130"	"9"	"130"	"9394477.19885254"	"HCD"	"MS2"	"4.241129"	"188.8"	"100.000"	"88.3985"	"30876"	"30876"	"30864"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"237.2"	""	"184.8"	""	"276.7"	""	"300.4"	""	"381.1"	"413.8"	""	"1100"	"50"	"37.000"	"30.000"	"0.00061004614839432"	"22"	"0"	"8.587E-06"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"611.01215"	"1831.02188"	"1831.02131"	"0.31"	"0.00019"	"13/130"	"13"	"130"	"5499849.56964111"	"HCD"	"MS2"	"6.064479"	"120.0"	"100.000"	"88.6934"	"30995"	"30995"	"30982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.0"	""	"121.7"	""	"170.2"	""	"186.9"	""	"230.4"	"288.0"	""	"1100"	"55"	"37.000"	"30.000"	"0.000183807272014363"	"22"	"0"	"3.79E-05"	"0.74"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"611.01221"	"1831.02207"	"1831.02131"	"0.41"	"0.00025"	"9/130"	"9"	"130"	"5781745.88348389"	"HCD"	"MS2"	"6.06158"	"127.4"	"100.000"	"88.5883"	"30992"	"30992"	"30978"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"146.5"	""	"129.2"	""	"177.5"	""	"218.8"	""	"249.7"	"290.0"	""	"1100"	"49"	"37.000"	"30.000"	"0.0006343992918016"	"21"	"0"	"8.279E-06"	"0.876"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"916.01520"	"1831.02312"	"1831.02131"	"0.99"	"0.00090"	"15/130"	"15"	"130"	"399113.888916016"	"HCD"	"MS2"	"0"	"33.0"	"100.000"	"88.0169"	"30760"	"30760"	"30739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"37.8"	""	"48.9"	""	"57.7"	""	"63.8"	"62.5"	""	"1097"	"29"	"37.000"	"30.000"	"0.0729754248260982"	"14"	"0"	"0.0002917"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TPEENEAIASIAK"	"[R].tPEENEAIASIAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"P08427"	"Pulmonary surfactant-associated protein A OS=Rattus norvegicus OX=10116 GN=Sftpa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"611.01257"	"1831.02317"	"1831.02131"	"1.01"	"0.00062"	"13/130"	"13"	"130"	"9411586.1151123"	"HCD"	"MS2"	"4.291572"	"199.6"	"100.000"	"88.2957"	"30874"	"30874"	"30861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"245.7"	""	"212.0"	""	"276.6"	""	"339.8"	""	"392.9"	"429.6"	""	"1097"	"51"	"37.000"	"30.000"	"0.000434686979768539"	"23"	"0"	"8.264E-06"	"0.877"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NAVTQEFGPVPDTAR"	"[R].nAVTqEFGPVPDTAR.[Y]"	"N-Term(TMT6plex); Q5(Deamidated)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"2"	"2"	"0.9643"	"0.0000"	"1"	"1"	"1"	"916.48218"	"1831.95708"	"1831.93876"	"10.00"	"0.00916"	"9/158"	"9"	"158"	"121796.268005371"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"76.9250"	"26249"	"26249"	"26231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.1"	""	"6.9"	""	"12.5"	""	"7.3"	""	"10.2"	"11.1"	""	"1021"	"28"	"37.000"	"30.000"	"0.0779822472730537"	"14"	"0.0001991"	"0.004846"	"0.307"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAQPAVPAPLANLK"	"[M].sSPAQPAVPAPLANLk.[I]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"611.35352"	"1832.04599"	"1832.04791"	"-1.05"	"-0.00064"	"7/144"	"7"	"144"	"1870456.90692139"	"HCD"	"MS2"	"11.62416"	"39.5"	"100.000"	"112.1759"	"40405"	"40405"	"40383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.3"	""	"55.9"	""	"58.5"	""	"52.2"	"0.7"	"75.7"	"71.8"	""	"991"	"42"	"36.000"	"29.000"	"0.00335771367021089"	"17"	"0.0001686"	"0.001085"	"0.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAQPAVPAPLANLK"	"[M].sSPAQPAVPAPLANLk.[I]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.7609"	"0.0000"	"1"	"1"	"1"	"916.52679"	"1832.04631"	"1832.04791"	"-0.87"	"-0.00080"	"8/144"	"8"	"144"	"236910.648071289"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"112.1805"	"40407"	"40407"	"40383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.1"	""	"13.5"	""	"12.5"	""	"9.4"	""	"11.6"	"12.5"	""	"997"	"46"	"36.000"	"29.000"	"0.00117399206802216"	"26"	"0.0001991"	"0.004375"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAQPAVPAPLANLK"	"[M].sSPAQPAVPAPLANLk.[I]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.8305"	"0.0000"	"1"	"1"	"1"	"611.35400"	"1832.04746"	"1832.04791"	"-0.25"	"-0.00015"	"8/144"	"8"	"144"	"2480170.71820068"	"HCD"	"MS2"	"4.105055"	"48.6"	"100.000"	"112.0695"	"40348"	"40348"	"40329"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.2"	""	"69.0"	""	"67.5"	""	"73.0"	"1.4"	"77.6"	"83.9"	""	"984"	"59"	"36.000"	"29.000"	"6.38212201324107E-05"	"26"	"0"	"0.000147"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAQPAVPAPLANLK"	"[M].sSPAQPAVPAPLANLk.[I]"	"N-Term(Prot)(Acetyl); K16(TMT6plex)"	"2"	"2"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2;Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P13601; P51647"	"Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a7 PE=1 SV=2; Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"2"	"2"	"0.8553"	"0.0000"	"1"	"1"	"1"	"916.52740"	"1832.04753"	"1832.04791"	"-0.21"	"-0.00019"	"9/144"	"9"	"144"	"327026.387207031"	"HCD"	"MS2"	"4.39708"	"9.4"	"100.000"	"112.1088"	"40364"	"40364"	"40345"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"14.7"	""	"15.9"	""	"15.3"	""	"15.2"	"16.8"	""	"983"	"76"	"36.000"	"29.000"	"1.35995181871976E-06"	"28"	"0"	"7.422E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEMTPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.6154"	"0.0000"	"1"	"1"	"1"	"917.45520"	"1833.90312"	"1833.90363"	"-0.28"	"-0.00026"	"5/148"	"5"	"148"	"154565.828125"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"69.8589"	"23381"	"23381"	"23358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.5"	""	"14.9"	""	"13.9"	""	"11.7"	""	"18.8"	"17.9"	""	"808"	"13"	"36.000"	"29.000"	"2.05769671907107"	"18"	"0.0001686"	"0.00168"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEMTPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"0.4500"	"0.0000"	"1"	"1"	"1"	"917.45575"	"1833.90422"	"1833.90363"	"0.32"	"0.00029"	"5/148"	"5"	"148"	"96447.5090332031"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"69.9020"	"23433"	"23433"	"23404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.2"	""	"6.5"	""	"4.2"	""	"6.2"	""	"8.0"	"9.7"	""	"830"	"20"	"36.000"	"29.000"	"0.402761636406879"	"25"	"0.0001686"	"0.001817"	"0.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLMESPANEMTPTR"	"[R].qLMESPANEMTPTR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"Q68FS4"	"Cytosol aminopeptidase OS=Rattus norvegicus OX=10116 GN=Lap3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"917.45593"	"1833.90459"	"1833.90363"	"0.52"	"0.00048"	"8/148"	"8"	"148"	"226411.963806152"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"70.2088"	"23557"	"23557"	"23533"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.7"	""	"12.5"	""	"19.6"	""	"13.7"	""	"24.8"	"20.0"	""	"830"	"15"	"36.000"	"29.000"	"1.35846388374718"	"14"	"0.0001991"	"0.002032"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.34186"	"1835.01102"	"1835.01119"	"-0.09"	"-0.00006"	"16/132"	"16"	"132"	"396415.11706543"	"HCD"	"MS2"	"50.1714"	"10.5"	"100.000"	"99.6091"	"35405"	"35405"	"35383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.0"	""	"13.5"	""	"13.5"	""	"15.3"	""	"22.7"	"19.5"	""	"1236"	"51"	"37.000"	"30.000"	"0.000495437043173586"	"16"	"0"	"5.092E-06"	"0.92"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIEEAPAPGIDPEVR"	"[K].iIEEAPAPGIDPEVR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"Q5I0C3"	"Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mccc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.34320"	"1835.01505"	"1835.01119"	"2.10"	"0.00128"	"14/132"	"14"	"132"	"276985.471130371"	"HCD"	"MS2"	"8.091443"	"7.1"	"100.000"	"99.6773"	"35461"	"35461"	"35440"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"9.9"	""	"12.0"	""	"9.6"	""	"9.5"	"14.5"	""	"1180"	"44"	"37.000"	"30.000"	"0.00239801564207476"	"15"	"0"	"1.8E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PHPYPALTPEQK"	"[M].pHPYPALTPEQk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.68500"	"1836.04044"	"1836.04199"	"-0.84"	"-0.00052"	"8/94"	"8"	"94"	"1160391.64727783"	"HCD"	"MS2"	"31.7977"	"46.6"	"100.000"	"53.9182"	"16913"	"16913"	"16889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.8"	""	"50.3"	""	"57.4"	""	"77.5"	""	"94.1"	"102.4"	""	"1004"	"9"	"37.000"	"30.000"	"5.73724924064465"	"13"	"0.0001991"	"0.002625"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"PHPYPALTPEQK"	"[M].pHPYPALTPEQk.[K]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"612.68518"	"1836.04099"	"1836.04199"	"-0.55"	"-0.00033"	"10/94"	"10"	"94"	"1109906.5413208"	"HCD"	"MS2"	"32.93071"	"40.4"	"100.000"	"53.5984"	"16816"	"16816"	"16791"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.2"	""	"43.7"	""	"49.0"	""	"66.1"	"0.0"	"84.9"	"95.4"	""	"1006"	"8"	"37.000"	"30.000"	"8.12022354083722"	"13"	"0.0001991"	"0.002651"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"612.98828"	"1836.95029"	"1836.95911"	"-4.80"	"-0.00294"	"9/124"	"9"	"124"	"720880.699401855"	"HCD"	"MS2"	"77.37869"	"26.3"	"100.000"	"78.8403"	"27023"	"27023"	"26993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"26.3"	""	"27.9"	""	"45.9"	""	"78.5"	"45.9"	""	"1015"	"7"	"37.000"	"30.000"	"10.1961460239893"	"15"	"0.0005161"	"0.00676"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9600"	"0.0000"	"1"	"1"	"1"	"918.98236"	"1836.95745"	"1836.95911"	"-0.91"	"-0.00083"	"17/124"	"17"	"124"	"664098.082092285"	"HCD"	"MS2"	"0"	"41.5"	"100.000"	"78.5499"	"26904"	"26904"	"26881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.1"	""	"30.4"	""	"33.8"	""	"76.7"	""	"110.7"	"103.8"	""	"1066"	"25"	"37.000"	"30.000"	"0.174071314547855"	"15"	"0"	"4.061E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"918.98260"	"1836.95793"	"1836.95911"	"-0.64"	"-0.00059"	"9/124"	"9"	"124"	"1043701.27954102"	"HCD"	"MS2"	"0"	"63.2"	"100.000"	"78.2481"	"26781"	"26781"	"26758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.2"	""	"55.9"	""	"51.8"	""	"128.4"	""	"156.2"	"135.1"	""	"1050"	"36"	"37.000"	"30.000"	"0.0122224791027413"	"15"	"0"	"3.222E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9143"	"0.0000"	"1"	"1"	"1"	"612.99091"	"1836.95816"	"1836.95911"	"-0.51"	"-0.00031"	"13/124"	"13"	"124"	"2779633.63555908"	"HCD"	"MS2"	"23.32439"	"86.2"	"100.000"	"78.0497"	"26700"	"26700"	"26682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"117.5"	""	"99.7"	""	"96.6"	""	"146.0"	""	"187.7"	"170.9"	""	"1049"	"35"	"37.000"	"30.000"	"0.0153019046884361"	"18"	"0"	"2.059E-05"	"0.795"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"918.98273"	"1836.95818"	"1836.95911"	"-0.51"	"-0.00047"	"6/124"	"6"	"124"	"130068.959350586"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"77.9276"	"26651"	"26651"	"26627"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"10.4"	""	"10.7"	""	"18.7"	""	"24.7"	"21.6"	""	"1049"	"22"	"37.000"	"30.000"	"0.318233204869171"	"16"	"9.9E-05"	"0.0007181"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"918.98285"	"1836.95842"	"1836.95911"	"-0.37"	"-0.00034"	"6/124"	"6"	"124"	"213030.220214844"	"HCD"	"MS2"	"29.01601"	"16.2"	"100.000"	"78.0981"	"26747"	"26747"	"26726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"13.9"	""	"18.8"	""	"31.6"	""	"38.0"	"35.0"	""	"1051"	"17"	"37.000"	"30.000"	"0.956252801199547"	"14"	"0.0001686"	"0.001911"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"612.99109"	"1836.95871"	"1836.95911"	"-0.21"	"-0.00013"	"14/124"	"14"	"124"	"2178567.21984863"	"HCD"	"MS2"	"48.8698"	"67.4"	"100.000"	"78.1236"	"26757"	"26757"	"26742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.1"	""	"83.9"	""	"86.5"	""	"121.9"	""	"133.6"	"124.8"	""	"1061"	"54"	"37.000"	"30.000"	"0.00022013311961753"	"24"	"0"	"5.636E-06"	"0.911"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGVLDSVTDQDSK"	"[R].dGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"918.98322"	"1836.95915"	"1836.95911"	"0.03"	"0.00002"	"15/124"	"15"	"124"	"754258.759216309"	"HCD"	"MS2"	"40.63378"	"57.3"	"100.000"	"78.4924"	"26907"	"26907"	"26887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"77.6"	""	"48.4"	""	"55.1"	""	"108.8"	""	"139.3"	"120.1"	""	"1061"	"30"	"37.000"	"30.000"	"0.048717544243454"	"15"	"0"	"7.488E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EYQDIQEMIFHR"	"[R].eYQDIQEMIFHR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"O08590"	"Membrane primary amine oxidase OS=Rattus norvegicus OX=10116 GN=Aoc3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.30707"	"1837.90665"	"1837.91043"	"-2.06"	"-0.00126"	"9/118"	"9"	"118"	"126244.715454102"	"HCD"	"MS2"	"39.06107"	"4.8"	"100.000"	"109.8648"	"39454"	"39454"	"39433"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"5.7"	""	"7.6"	""	"6.8"	""	"7.6"	"10.5"	""	"849"	"14"	"36.000"	"29.000"	"1.72138373297839"	"13"	"0.0001991"	"0.002023"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVTYNGVDNNK"	"[K].lAAVTYnGVDNNk.[N]"	"N-Term(TMT6plex); N7(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"0.4375"	"0.0000"	"1"	"1"	"1"	"613.34094"	"1838.00827"	"1838.00600"	"1.24"	"0.00076"	"11/118"	"11"	"118"	"331957.010131836"	"HCD"	"MS2"	"42.90771"	"14.6"	"100.000"	"83.8514"	"29080"	"29080"	"29059"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.1"	""	"18.3"	""	"24.8"	""	"22.0"	""	"29.2"	"23.0"	""	"1131"	"32"	"37.000"	"30.000"	"0.0386752036537649"	"17"	"0"	"0.0003624"	"0.539"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LAAVTYNGVDNNK"	"[K].lAAVTYnGVDNNk.[N]"	"N-Term(TMT6plex); N7(Deamidated); K13(TMT6plex)"	"1"	"1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"Q9WVC0"	"Septin-7 OS=Rattus norvegicus OX=10116 GN=Sept7 PE=1 SV=1"	"0"	"3"	"3"	"0.6486"	"0.0000"	"1"	"1"	"1"	"613.34167"	"1838.01047"	"1838.00600"	"2.43"	"0.00149"	"11/118"	"11"	"118"	"295421.41583252"	"HCD"	"MS2"	"0"	"14.6"	"100.000"	"83.8015"	"29031"	"29031"	"29009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"17.9"	""	"20.9"	""	"22.4"	""	"28.4"	"29.2"	""	"1108"	"37"	"37.000"	"30.000"	"0.0110029658421598"	"17"	"9.9E-05"	"0.0004826"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YGEAGDGPGWGGPHPR"	"[R].yGEAGDGPGWGGPHPR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.62933"	"1838.87345"	"1838.87716"	"-2.02"	"-0.00124"	"14/126"	"14"	"126"	"810438.462158203"	"HCD"	"MS2"	"27.36211"	"51.2"	"100.000"	"46.0264"	"13711"	"13711"	"13685"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"63.7"	""	"66.9"	""	"64.0"	""	"87.7"	""	"98.9"	"105.2"	""	"631"	"19"	"34.000"	"28.000"	"0.428547892398247"	"14"	"0"	"7.384E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"613.66528"	"1838.98130"	"1838.98215"	"-0.47"	"-0.00029"	"10/104"	"10"	"104"	"262472.428161621"	"HCD"	"MS2"	"27.22069"	"10.1"	"100.000"	"106.2842"	"38108"	"38108"	"38094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.3"	""	"4.8"	""	"8.4"	""	"29.7"	""	"18.5"	"26.9"	""	"1106"	"39"	"37.000"	"30.000"	"0.00632011719138743"	"28"	"9.9E-05"	"0.0005351"	"0.504"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"613.66547"	"1838.98185"	"1838.98215"	"-0.17"	"-0.00010"	"10/104"	"10"	"104"	"379200.329040527"	"HCD"	"MS2"	"15.64712"	"12.1"	"100.000"	"105.9804"	"37969"	"37969"	"37959"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.4"	""	"6.9"	""	"8.1"	""	"45.8"	""	"18.5"	"30.1"	""	"1103"	"35"	"37.000"	"30.000"	"0.0187735116620102"	"16"	"9.9E-05"	"0.0004753"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"613.66571"	"1838.98258"	"1838.98215"	"0.23"	"0.00014"	"10/104"	"10"	"104"	"709712.000915527"	"HCD"	"MS2"	"21.34974"	"19.5"	"100.000"	"105.9877"	"37990"	"37990"	"37977"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"10.3"	""	"16.7"	""	"72.1"	""	"36.5"	"39.3"	""	"1092"	"36"	"37.000"	"30.000"	"0.0127113782668509"	"19"	"0"	"4.599E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"613.66608"	"1838.98368"	"1838.98215"	"0.83"	"0.00051"	"10/104"	"10"	"104"	"765089.123474121"	"HCD"	"MS2"	"19.2613"	"21.1"	"100.000"	"105.7049"	"37859"	"37859"	"37843"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"10.6"	""	"11.4"	""	"85.6"	""	"35.3"	"47.6"	""	"1096"	"34"	"37.000"	"30.000"	"0.0232691521042579"	"22"	"0"	"6.112E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTMEEILEGLK"	"[K].dSTmEEILEGLk.[F]"	"N-Term(TMT6plex); M4(Oxidation); K12(TMT6plex)"	"1"	"1"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"P05544"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"919.99677"	"1838.98625"	"1838.98215"	"2.23"	"0.00205"	"4/104"	"4"	"104"	"111456.994628906"	"HCD"	"MS2"	"39.03239"	"7.9"	"100.000"	"105.7652"	"37883"	"37883"	"37865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.1"	""	"4.1"	""	"2.8"	""	"30.7"	""	"19.8"	"16.3"	""	"1112"	"12"	"37.000"	"30.000"	"3.54058309624801"	"16"	"0.008868"	"0.1125"	"0.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLHTAK"	"[R].gNPTVEVDLHTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429; P07323"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Gamma-enolase OS=Rattus norvegicus OX=10116 GN=Eno2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.68372"	"1839.03659"	"1839.03763"	"-0.56"	"-0.00035"	"15/132"	"15"	"132"	"3246425.01556396"	"HCD"	"MS2"	"16.07058"	"95.2"	"100.000"	"60.1768"	"19453"	"19453"	"19435"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"163.3"	""	"74.5"	""	"73.8"	""	"71.7"	""	"100.1"	"426.4"	""	"894"	"58"	"36.000"	"29.000"	"7.57368996799956E-05"	"16"	"0"	"3.068E-08"	"1.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLHTAK"	"[R].gNPTVEVDLHTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"2"	"P15429"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3"	"P15429; P07323"	"Beta-enolase OS=Rattus norvegicus OX=10116 GN=Eno3 PE=1 SV=3; Gamma-enolase OS=Rattus norvegicus OX=10116 GN=Eno2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"613.68402"	"1839.03751"	"1839.03763"	"-0.07"	"-0.00004"	"13/132"	"13"	"132"	"3081215.43188477"	"HCD"	"MS2"	"11.09533"	"90.0"	"100.000"	"60.0850"	"19449"	"19449"	"19429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"144.7"	""	"67.2"	""	"66.9"	""	"88.0"	"1.8"	"94.1"	"392.9"	""	"919"	"39"	"36.000"	"29.000"	"0.00615581437872218"	"15"	"0"	"3.733E-07"	"1.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAIVDVPVGDELLGR"	"[R].tGAIVDVPVGDELLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"614.01746"	"1840.03781"	"1840.03774"	"0.04"	"0.00002"	"18/142"	"18"	"142"	"1385779.73132324"	"HCD"	"MS2"	"6.934018"	"28.0"	"100.000"	"111.7077"	"40201"	"40201"	"40183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"25.0"	""	"25.9"	""	"77.7"	""	"59.5"	"52.7"	""	"970"	"39"	"36.000"	"29.000"	"0.00660300670995986"	"18"	"0"	"2.087E-06"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAIVDVPVGDELLGR"	"[R].tGAIVDVPVGDELLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.4211"	"0.0000"	"1"	"1"	"1"	"920.52258"	"1840.03789"	"1840.03774"	"0.08"	"0.00007"	"6/142"	"6"	"142"	"71146.3461914063"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"111.8189"	"40260"	"40260"	"40236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.8"	""	"5.4"	""	"5.4"	""	"6.8"	""	"6.4"	"5.8"	""	"970"	"19"	"36.000"	"29.000"	"0.678799851447719"	"25"	"0.001261"	"0.009834"	"0.243"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGAIVDVPVGDELLGR"	"[R].tGAIVDVPVGDELLGR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"P15999"	"ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1a PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"920.52264"	"1840.03801"	"1840.03774"	"0.15"	"0.00013"	"11/142"	"11"	"142"	"227654.571228027"	"HCD"	"MS2"	"0"	"10.8"	"100.000"	"111.7195"	"40206"	"40206"	"40183"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"14.2"	""	"15.5"	""	"16.7"	""	"21.1"	"18.4"	""	"970"	"54"	"36.000"	"29.000"	"0.000173676771994778"	"24"	"0"	"2.024E-06"	"1.002"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NKEEAAEYAK"	"[K].nkEEAAEYAk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.01880"	"1840.04184"	"1840.04194"	"-0.05"	"-0.00003"	"10/98"	"10"	"98"	"2336702.68109131"	"HCD"	"MS2"	"4.390737"	"145.0"	"100.000"	"42.0509"	"12125"	"12125"	"12097"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"246.1"	""	"198.1"	""	"209.8"	""	"264.7"	"1.5"	"253.9"	"196.0"	""	"969"	"5"	"36.000"	"29.000"	"16.9158482849375"	"13"	"0.0001991"	"0.00298"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IGTAEPDYGALYEGR"	"[K].iGTAEPDYGALYEGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"P10686"	"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 OS=Rattus norvegicus OX=10116 GN=Plcg1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.96875"	"1840.93022"	"1840.92786"	"1.28"	"0.00118"	"4/132"	"4"	"132"	"87749.4813842773"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"95.8330"	"33878"	"33878"	"33850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.1"	""	"6.5"	""	"7.0"	""	"5.5"	""	"5.0"	"8.3"	""	"898"	"3"	"36.000"	"29.000"	"20.1486680079976"	"13"	"0.002525"	"0.02513"	"0.158"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYELSPTAAANFTR"	"[R].nGYELSPTAAANFTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9286"	"0.0000"	"1"	"1"	"1"	"920.97308"	"1840.93889"	"1840.93909"	"-0.11"	"-0.00010"	"4/160"	"4"	"160"	"69682.4910888672"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"89.4423"	"31336"	"31336"	"31316"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.6"	""	"8.7"	""	"5.2"	""	"8.0"	""	"9.5"	"9.5"	""	"952"	"14"	"36.000"	"29.000"	"1.81805472919862"	"15"	"0.001615"	"0.01347"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYELSPTAAANFTR"	"[R].nGYELSPTAAANFTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.6538"	"0.0000"	"1"	"1"	"1"	"920.97327"	"1840.93926"	"1840.93909"	"0.09"	"0.00008"	"6/160"	"6"	"160"	"151531.441467285"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"89.8338"	"31452"	"31452"	"31432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.8"	""	"10.9"	""	"12.2"	""	"14.7"	""	"17.8"	"17.3"	""	"953"	"26"	"36.000"	"29.000"	"0.123328345407045"	"23"	"0"	"5.603E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYELSPTAAANFTR"	"[R].nGYELSPTAAANFTR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"920.97412"	"1840.94097"	"1840.93909"	"1.02"	"0.00094"	"6/160"	"6"	"160"	"145876.016601563"	"HCD"	"MS2"	"0"	"9.3"	"100.000"	"89.7311"	"31451"	"31451"	"31434"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.0"	""	"16.9"	""	"11.2"	""	"16.6"	""	"16.9"	"13.5"	""	"948"	"19"	"36.000"	"29.000"	"0.64532477948886"	"14"	"9.9E-05"	"0.0004325"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32843"	"1840.97074"	"1840.97330"	"-1.39"	"-0.00085"	"11/102"	"11"	"102"	"1234498.57000732"	"HCD"	"MS2"	"38.35999"	"39.0"	"100.000"	"88.7393"	"31013"	"31013"	"30994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.9"	""	"64.3"	""	"49.1"	""	"55.2"	""	"69.6"	"79.7"	""	"1020"	"20"	"37.000"	"30.000"	"0.469429281594117"	"14"	"9.9E-05"	"0.0008769"	"0.46"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32861"	"1840.97129"	"1840.97330"	"-1.09"	"-0.00067"	"9/102"	"9"	"102"	"443130.299133301"	"HCD"	"MS2"	"31.75929"	"19.1"	"100.000"	"88.9734"	"31148"	"31148"	"31131"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.5"	""	"23.3"	""	"29.9"	""	"30.6"	""	"31.8"	"39.0"	""	"1038"	"24"	"37.000"	"30.000"	"0.207093924325952"	"14"	"0.001999"	"0.01736"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"920.98993"	"1840.97258"	"1840.97330"	"-0.39"	"-0.00036"	"10/102"	"10"	"102"	"193845.436401367"	"HCD"	"MS2"	"11.22542"	"17.7"	"100.000"	"88.7150"	"31043"	"31043"	"31023"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.3"	""	"20.3"	""	"25.6"	""	"26.5"	""	"32.8"	"34.5"	""	"1025"	"21"	"37.000"	"30.000"	"0.367869574276573"	"17"	"0.002711"	"0.02831"	"0.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"920.99017"	"1840.97307"	"1840.97330"	"-0.13"	"-0.00012"	"5/102"	"5"	"102"	"105674.520019531"	"HCD"	"MS2"	"100"	"8.3"	"100.000"	"88.4220"	"30925"	"30925"	"30902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"10.7"	""	"12.9"	""	"9.4"	""	"15.1"	"17.5"	""	"1013"	"3"	"37.000"	"30.000"	"23.3119954518957"	"14"	"0.009514"	"0.126"	"0.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"614.32928"	"1840.97330"	"1840.97330"	"0.00"	"0.00000"	"9/102"	"9"	"102"	"1283700.88208008"	"HCD"	"MS2"	"18.33787"	"40.8"	"100.000"	"88.6368"	"31011"	"31011"	"30991"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"68.7"	""	"56.1"	""	"56.5"	""	"58.1"	""	"68.1"	"78.4"	""	"1012"	"41"	"37.000"	"30.000"	"0.00448900942091208"	"15"	"9.9E-05"	"0.0004016"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPTFSPEEGYVK"	"[K].ePTFSPEEGYVk.[M]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"Q4V8C3"	"Echinoderm microtubule-associated protein-like 1 OS=Rattus norvegicus OX=10116 GN=Eml1 PE=1 SV=2"	"0"	"3"	"3"	"0.9302"	"0.0000"	"1"	"1"	"1"	"614.32959"	"1840.97422"	"1840.97330"	"0.50"	"0.00030"	"11/102"	"11"	"102"	"484492.111450195"	"HCD"	"MS2"	"28.07708"	"20.8"	"100.000"	"89.0763"	"31150"	"31150"	"31130"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"25.1"	""	"31.8"	""	"32.1"	""	"36.7"	"45.6"	""	"1022"	"43"	"37.000"	"30.000"	"0.00239563638276231"	"18"	"0.0001991"	"0.004379"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGTGVVGGGAVGGPLSK"	"[M].aADGTGVVGGGAVGGPLSk.[D]"	"N-Term(Prot)(Acetyl); K19(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"921.00098"	"1840.99468"	"1840.99661"	"-1.05"	"-0.00097"	"7/174"	"7"	"174"	"73850.6223144531"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"100.7714"	"35879"	"35879"	"35851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.8"	""	"4.9"	""	"4.8"	""	"8.8"	""	"4.2"	"2.5"	""	"1099"	"15"	"37.000"	"30.000"	"1.90531899323666"	"14"	"0.000264"	"0.00607"	"0.287"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGTGVVGGGAVGGPLSK"	"[M].aADGTGVVGGGAVGGPLSk.[D]"	"N-Term(Prot)(Acetyl); K19(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"614.33673"	"1840.99564"	"1840.99661"	"-0.53"	"-0.00032"	"7/174"	"7"	"174"	"272179.803527832"	"HCD"	"MS2"	"12.84934"	"11.0"	"100.000"	"100.9307"	"35943"	"35943"	"35915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.6"	""	"13.9"	""	"14.8"	""	"19.7"	""	"22.7"	"18.5"	""	"1094"	"25"	"37.000"	"30.000"	"0.176192462883204"	"19"	"0"	"6.828E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGTGVVGGGAVGGPLSK"	"[M].aADGTGVVGGGAVGGPLSk.[D]"	"N-Term(Prot)(Acetyl); K19(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"2"	"2"	"0.8649"	"0.0000"	"1"	"1"	"1"	"921.00183"	"1840.99639"	"1840.99661"	"-0.12"	"-0.00011"	"11/174"	"11"	"174"	"100842.104370117"	"HCD"	"MS2"	"0"	"4.3"	"100.000"	"100.9413"	"35975"	"35975"	"35953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.0"	""	"6.0"	""	"7.9"	""	"8.4"	""	"7.5"	"5.1"	""	"1108"	"37"	"37.000"	"30.000"	"0.0109524118062197"	"20"	"0"	"2.507E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AADGTGVVGGGAVGGPLSK"	"[M].aADGTGVVGGGAVGGPLSk.[D]"	"N-Term(Prot)(Acetyl); K19(TMT6plex)"	"1"	"1"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"O54783"	"Choline/ethanolamine kinase OS=Rattus norvegicus OX=10116 GN=Chkb PE=1 SV=3"	"0"	"3"	"3"	"0.7222"	"0.0000"	"1"	"1"	"1"	"614.33704"	"1840.99656"	"1840.99661"	"-0.03"	"-0.00002"	"6/174"	"6"	"174"	"266040.888244629"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"100.9599"	"35982"	"35982"	"35965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.0"	""	"13.0"	""	"12.3"	""	"19.6"	""	"14.6"	"19.6"	""	"1105"	"18"	"37.000"	"30.000"	"0.971252796712177"	"18"	"0"	"0.0002757"	"0.563"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYELSPTAAANFTR"	"[R].nGYELSPTAAANFTR.[R]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.7273"	"0.0000"	"1"	"1"	"1"	"921.46515"	"1841.92302"	"1841.92311"	"-0.05"	"-0.00004"	"8/160"	"8"	"160"	"130757.18371582"	"HCD"	"MS2"	"45.23975"	"8.3"	"100.000"	"97.0267"	"34392"	"34392"	"34362"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"9.2"	""	"10.8"	""	"13.6"	""	"13.9"	"13.4"	""	"897"	"22"	"36.000"	"29.000"	"0.313879135207019"	"20"	"0.0001991"	"0.004335"	"0.317"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGYELSPTAAANFTR"	"[R].nGYELSPTAAANFTR.[R]"	"N-Term(TMT6plex); N1(Deamidated)"	"1"	"1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"P40307"	"Proteasome subunit beta type-2 OS=Rattus norvegicus OX=10116 GN=Psmb2 PE=1 SV=1"	"0"	"2"	"2"	"0.9474"	"0.0000"	"1"	"1"	"1"	"921.46558"	"1841.92388"	"1841.92311"	"0.42"	"0.00038"	"4/160"	"4"	"160"	"101647.462219238"	"HCD"	"MS2"	"12.7454"	"6.6"	"100.000"	"96.9435"	"34327"	"34327"	"34306"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"9.3"	""	"10.1"	""	"9.8"	""	"10.5"	"11.9"	""	"912"	"19"	"36.000"	"29.000"	"0.549496388809539"	"15"	"0.001348"	"0.01092"	"0.234"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"614.96960"	"1842.89426"	"1842.89723"	"-1.61"	"-0.00099"	"12/132"	"12"	"132"	"1530488.59234619"	"HCD"	"MS2"	"7.056314"	"30.7"	"100.000"	"65.2340"	"21538"	"21538"	"21520"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.8"	""	"42.6"	""	"43.2"	""	"46.2"	""	"64.3"	"55.4"	""	"720"	"42"	"35.000"	"28.000"	"0.00228719135466628"	"17"	"0"	"1.168E-05"	"0.846"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9661"	"0.0000"	"1"	"1"	"1"	"614.96997"	"1842.89536"	"1842.89723"	"-1.01"	"-0.00062"	"9/132"	"9"	"132"	"3023803.31195068"	"HCD"	"MS2"	"5.178115"	"55.0"	"100.000"	"65.5142"	"21619"	"21619"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.1"	""	"72.6"	""	"78.2"	""	"94.3"	""	"110.3"	"95.1"	""	"722"	"59"	"35.000"	"28.000"	"4.0598239560206E-05"	"18"	"0"	"3.11E-06"	"0.964"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9545"	"0.0000"	"1"	"1"	"1"	"614.97040"	"1842.89664"	"1842.89723"	"-0.32"	"-0.00020"	"14/132"	"14"	"132"	"1659604.50036621"	"HCD"	"MS2"	"35.1638"	"31.8"	"100.000"	"65.2031"	"21492"	"21492"	"21473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.6"	""	"43.0"	""	"48.9"	""	"48.4"	"1.7"	"60.1"	"55.7"	""	"740"	"44"	"35.000"	"28.000"	"0.00135270072896856"	"17"	"0"	"4.334E-06"	"0.934"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYAFNHSADFETVR"	"[R].gYAFNHSADFETVR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"Q5M7U6"	"Actin-related protein 2 OS=Rattus norvegicus OX=10116 GN=Actr2 PE=2 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"614.97064"	"1842.89737"	"1842.89723"	"0.08"	"0.00005"	"13/132"	"13"	"132"	"3219494.00317383"	"HCD"	"MS2"	"5.938296"	"54.8"	"100.000"	"65.5524"	"21668"	"21668"	"21648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.5"	""	"70.1"	""	"88.8"	""	"84.5"	""	"107.2"	"98.0"	""	"749"	"60"	"35.000"	"28.000"	"3.65133619325162E-05"	"19"	"0"	"3.2E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGQNYELHPEK"	"[K].lGGQNYELHPEk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"615.00793"	"1843.00925"	"1843.01142"	"-1.18"	"-0.00072"	"9/112"	"9"	"112"	"3050421.79827881"	"HCD"	"MS2"	"7.260682"	"97.8"	"100.000"	"58.6643"	"18873"	"18873"	"18855"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.6"	""	"111.9"	""	"137.8"	""	"154.4"	"0.7"	"187.7"	"163.6"	""	"1038"	"46"	"37.000"	"30.000"	"0.0013309672149527"	"18"	"0"	"2.458E-06"	"0.985"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGQNYELHPEK"	"[K].lGGQNYELHPEk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"615.00806"	"1843.00962"	"1843.01142"	"-0.98"	"-0.00060"	"16/112"	"16"	"112"	"4393716.40179443"	"HCD"	"MS2"	"11.24118"	"135.0"	"100.000"	"58.3719"	"18754"	"18754"	"18731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"252.6"	""	"181.5"	""	"177.2"	""	"208.8"	"3.0"	"226.7"	"226.7"	""	"1047"	"44"	"37.000"	"30.000"	"0.00212773082817989"	"18"	"0"	"9.132E-07"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGQNYELHPEK"	"[K].lGGQNYELHPEk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"615.00806"	"1843.00962"	"1843.01142"	"-0.98"	"-0.00060"	"16/112"	"16"	"112"	"4953642.10870361"	"HCD"	"MS2"	"8.044326"	"150.0"	"100.000"	"58.6505"	"18832"	"18832"	"18813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"282.4"	""	"193.0"	""	"192.6"	""	"221.6"	""	"270.8"	"268.2"	""	"1047"	"45"	"37.000"	"30.000"	"0.0016940127940266"	"19"	"0"	"3.203E-06"	"0.961"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGGQNYELHPEK"	"[K].lGGQNYELHPEk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"615.00812"	"1843.00980"	"1843.01142"	"-0.88"	"-0.00054"	"9/112"	"9"	"112"	"1859371.9432373"	"HCD"	"MS2"	"14.63407"	"61.5"	"100.000"	"58.9843"	"18968"	"18968"	"18949"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"99.7"	""	"82.5"	""	"84.5"	""	"102.4"	"0.8"	"112.5"	"99.7"	""	"1045"	"43"	"37.000"	"30.000"	"0.00259469487957801"	"25"	"0"	"2.685E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"922.03125"	"1843.05522"	"1843.05770"	"-1.34"	"-0.00124"	"7/124"	"7"	"124"	"119094.337219238"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"93.5976"	"33006"	"33006"	"32984"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.5"	""	"10.2"	""	"11.7"	""	"17.5"	""	"24.4"	"13.6"	""	"831"	"9"	"36.000"	"29.000"	"5.54078155063862"	"15"	"0.003904"	"0.04255"	"0.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"922.03156"	"1843.05583"	"1843.05770"	"-1.01"	"-0.00093"	"13/124"	"13"	"124"	"194859.258605957"	"HCD"	"MS2"	"0"	"12.8"	"100.000"	"93.7135"	"33017"	"33017"	"32993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"13.2"	""	"16.3"	""	"23.5"	""	"32.9"	"23.5"	""	"821"	"46"	"36.000"	"29.000"	"0.000971210035817904"	""	"0"	"0.0001342"	"0.627"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.8286"	"0.0000"	"1"	"1"	"1"	"922.03162"	"1843.05596"	"1843.05770"	"-0.95"	"-0.00087"	"7/124"	"7"	"124"	"236555.726196289"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"94.0047"	"33135"	"33135"	"33115"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.3"	""	"20.7"	""	"17.2"	""	"34.4"	""	"48.8"	"35.2"	""	"821"	"35"	"36.000"	"29.000"	"0.0121986890602846"	"21"	"0.0009352"	"0.008026"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"2"	"2"	"0.6774"	"0.0000"	"1"	"1"	"1"	"922.03204"	"1843.05681"	"1843.05770"	"-0.48"	"-0.00044"	"9/124"	"9"	"124"	"294415.358215332"	"HCD"	"MS2"	"0"	"21.8"	"100.000"	"93.9094"	"33132"	"33132"	"33110"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.5"	""	"19.8"	""	"28.1"	""	"36.1"	""	"60.5"	"42.6"	""	"826"	"62"	"36.000"	"29.000"	"2.70364739889784E-05"	""	"0"	"4.053E-07"	"1.146"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.6538"	"0.0000"	"1"	"1"	"1"	"615.02386"	"1843.05704"	"1843.05770"	"-0.36"	"-0.00022"	"11/124"	"11"	"124"	"324768.799804688"	"HCD"	"MS2"	"25.00975"	"11.9"	"100.000"	"94.2577"	"33274"	"33274"	"33247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"11.2"	""	"13.2"	""	"21.4"	""	"26.3"	"27.2"	""	"826"	"26"	"36.000"	"29.000"	"0.108130958239444"	"23"	"0"	"9.951E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"615.02386"	"1843.05704"	"1843.05770"	"-0.36"	"-0.00022"	"12/124"	"12"	"124"	"5630216.74328613"	"HCD"	"MS2"	"4.109667"	"98.7"	"100.000"	"93.8564"	"33111"	"33111"	"33094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.3"	""	"92.0"	""	"105.6"	""	"173.9"	""	"261.2"	"209.0"	""	"826"	"49"	"36.000"	"29.000"	"0.000524747105451127"	""	"0"	"7.285E-07"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"615.02405"	"1843.05759"	"1843.05770"	"-0.06"	"-0.00004"	"10/124"	"10"	"124"	"350581.6796875"	"HCD"	"MS2"	"10.89432"	"10.6"	"100.000"	"94.3184"	"33263"	"33263"	"33243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"12.2"	""	"12.2"	""	"20.2"	""	"24.1"	"19.5"	""	"840"	"23"	"36.000"	"29.000"	"0.21441209998967"	"15"	"0.0001991"	"0.002632"	"0.361"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.6304"	"0.0000"	"1"	"1"	"1"	"615.02435"	"1843.05851"	"1843.05770"	"0.44"	"0.00027"	"12/124"	"12"	"124"	"1319297.26696777"	"HCD"	"MS2"	"17.55161"	"29.0"	"100.000"	"93.5561"	"32989"	"32989"	"32968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.6"	""	"29.7"	""	"32.6"	""	"54.2"	""	"76.8"	"54.5"	""	"830"	"46"	"36.000"	"29.000"	"0.00104483592501992"	""	"0"	"3.038E-06"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.5814"	"0.0000"	"1"	"1"	"1"	"615.02435"	"1843.05851"	"1843.05770"	"0.44"	"0.00027"	"12/124"	"12"	"124"	"5612631.38446045"	"HCD"	"MS2"	"3.122158"	"102.3"	"100.000"	"93.9561"	"33116"	"33116"	"33099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.1"	""	"86.0"	""	"107.8"	""	"188.0"	"0.7"	"290.0"	"200.0"	""	"830"	"43"	"36.000"	"29.000"	"0.00191006478036263"	""	"0"	"7.913E-07"	"1.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SSPAITLENPDIK"	"[R].sSPAITLENPDIk.[Y]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"P20070"	"NADH-cytochrome b5 reductase 3 OS=Rattus norvegicus OX=10116 GN=Cyb5r3 PE=1 SV=2"	"0"	"3"	"3"	"0.5610"	"0.0000"	"1"	"1"	"1"	"615.02478"	"1843.05979"	"1843.05770"	"1.13"	"0.00070"	"13/124"	"13"	"124"	"1470819.84997559"	"HCD"	"MS2"	"14.40727"	"32.6"	"100.000"	"93.6654"	"32997"	"32997"	"32980"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.7"	""	"36.9"	""	"37.7"	""	"69.0"	""	"72.2"	"59.4"	""	"842"	"41"	"36.000"	"29.000"	"0.00350172547634225"	""	"0"	"3.106E-05"	"0.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGTSAPSMTSAALR"	"[K].tTYGTSAPSMTSAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.47400"	"1843.94072"	"1843.94213"	"-0.76"	"-0.00070"	"4/142"	"4"	"142"	"121609.875732422"	"HCD"	"MS2"	"0"	"6.7"	"100.000"	"67.7594"	"22560"	"22560"	"22536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"11.1"	""	"11.6"	""	"6.7"	""	"11.1"	"8.0"	""	"1000"	"6"	"36.000"	"30.000"	"13.3650320433166"	"13"	"0.00329"	"0.0357"	"0.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGTSAPSMTSAALR"	"[K].tTYGTSAPSMTSAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.47430"	"1843.94133"	"1843.94213"	"-0.43"	"-0.00040"	"5/142"	"5"	"142"	"133228.990478516"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"67.7053"	"22507"	"22507"	"22483"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"11.2"	""	"12.7"	""	"9.4"	""	"15.9"	"13.3"	""	"997"	"10"	"36.000"	"29.000"	"4.56735914325817"	"13"	"0.002588"	"0.02654"	"0.153"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGTSAPSMTSAALR"	"[K].tTYGTSAPSMTSAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"922.47461"	"1843.94194"	"1843.94213"	"-0.10"	"-0.00009"	"5/142"	"5"	"142"	"130273.657165527"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"67.9886"	"22621"	"22621"	"22604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"10.9"	""	"12.5"	""	"10.5"	""	"14.8"	"15.6"	""	"1006"	"19"	"37.000"	"30.000"	"0.581524457822626"	"14"	"0.0001991"	"0.002517"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGTSAPSMTSAALR"	"[K].tTYGTSAPSMTSAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.31897"	"1843.94236"	"1843.94213"	"0.12"	"0.00008"	"17/142"	"17"	"142"	"938506.202514648"	"HCD"	"MS2"	"18.37775"	"28.9"	"100.000"	"67.7421"	"22522"	"22522"	"22499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.7"	""	"28.7"	""	"34.4"	""	"46.4"	"4.0"	"58.0"	"63.2"	""	"1004"	"47"	"37.000"	"30.000"	"0.000987878917432835"	"15"	"0"	"6.368E-07"	"1.106"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGTSAPSMTSAALR"	"[K].tTYGTSAPSMTSAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.31909"	"1843.94272"	"1843.94213"	"0.32"	"0.00020"	"16/142"	"16"	"142"	"671151.091430664"	"HCD"	"MS2"	"36.65566"	"19.1"	"100.000"	"67.7917"	"22573"	"22573"	"22550"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"20.4"	""	"27.4"	""	"34.7"	"1.4"	"43.6"	"32.7"	""	"1002"	"51"	"36.000"	"30.000"	"0.000410996123709239"	"16"	"0"	"2.093E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTYGTSAPSMTSAALR"	"[K].tTYGTSAPSMTSAALR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"Q8CG45"	"Aflatoxin B1 aldehyde reductase member 2 OS=Rattus norvegicus OX=10116 GN=Akr7a2 PE=1 SV=2"	"0"	"2"	"2"	"0.6818"	"0.0000"	"1"	"1"	"1"	"922.47510"	"1843.94292"	"1843.94213"	"0.43"	"0.00040"	"5/142"	"5"	"142"	"123078.620483398"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"68.0796"	"22690"	"22690"	"22668"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"12.7"	""	"8.5"	""	"10.5"	""	"17.7"	"14.0"	""	"1002"	"22"	"36.000"	"30.000"	"0.336385855315902"	"20"	"9.9E-05"	"0.0007683"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFHTVTTTDDPVIR"	"[R].iFHTVTTTDDPVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.34125"	"1844.00919"	"1844.01153"	"-1.27"	"-0.00078"	"10/116"	"10"	"116"	"494339.338867188"	"HCD"	"MS2"	"12.13397"	"11.9"	"100.000"	"82.7904"	"28622"	"28622"	"28602"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.7"	""	"17.0"	""	"17.2"	""	"16.9"	""	"22.5"	"21.3"	""	"1076"	"40"	"37.000"	"30.000"	"0.00568567819956949"	"15"	"0"	"0.0001766"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFHTVTTTDDPVIR"	"[R].iFHTVTTTDDPVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"615.34186"	"1844.01102"	"1844.01153"	"-0.28"	"-0.00017"	"7/116"	"7"	"116"	"1243750.79736328"	"HCD"	"MS2"	"12.44662"	"13.9"	"100.000"	"82.5574"	"28556"	"28556"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.7"	""	"17.8"	""	"21.6"	""	"21.1"	""	"26.8"	"25.8"	""	"1087"	"42"	"37.000"	"30.000"	"0.00354976455363902"	"16"	"0"	"1.831E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFHTVTTTDDPVIR"	"[R].iFHTVTTTDDPVIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"Q6AYK8"	"Eukaryotic translation initiation factor 3 subunit D OS=Rattus norvegicus OX=10116 GN=Eif3d PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"615.34204"	"1844.01157"	"1844.01153"	"0.02"	"0.00001"	"5/116"	"5"	"116"	"403009.191101074"	"HCD"	"MS2"	"21.24264"	"11.7"	"100.000"	"82.9429"	"28712"	"28712"	"28688"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.3"	""	"18.0"	""	"13.7"	""	"18.3"	""	"21.3"	"25.4"	""	"1081"	"18"	"37.000"	"30.000"	"0.823750513427435"	"14"	"0.0001686"	"0.001828"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.8974"	"0.0000"	"1"	"1"	"1"	"615.62579"	"1844.86283"	"1844.86526"	"-1.32"	"-0.00081"	"12/118"	"12"	"118"	"1060972.97442627"	"HCD"	"MS2"	"6.385829"	"19.3"	"100.000"	"92.8916"	"32685"	"32685"	"32669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"21.6"	""	"24.8"	""	"34.0"	""	"36.6"	"38.1"	""	"490"	"39"	"33.000"	"26.000"	"0.00287187864559292"	"19"	"0"	"1.135E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"615.62610"	"1844.86374"	"1844.86526"	"-0.82"	"-0.00051"	"13/118"	"13"	"118"	"893794.175598145"	"HCD"	"MS2"	"5.768495"	"20.0"	"100.000"	"92.5806"	"32565"	"32565"	"32536"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.0"	""	"19.5"	""	"20.4"	""	"33.3"	""	"45.6"	"44.4"	""	"495"	"36"	"33.000"	"26.000"	"0.00692747876609504"	"18"	"0"	"0.000134"	"0.628"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"615.62640"	"1844.86466"	"1844.86526"	"-0.33"	"-0.00020"	"13/118"	"13"	"118"	"706193.495117188"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"92.5035"	"32569"	"32569"	"32545"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.9"	""	"13.3"	""	"15.7"	""	"24.0"	""	"31.0"	"27.0"	""	"498"	"33"	"33.000"	"26.000"	"0.0139059078489471"	"17"	"0"	"8.781E-05"	"0.665"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTDAEFHTFFDER"	"[R].tTDAEFHTFFDER.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"P18292"	"Prothrombin OS=Rattus norvegicus OX=10116 GN=F2 PE=1 SV=1"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"615.62653"	"1844.86502"	"1844.86526"	"-0.13"	"-0.00008"	"12/118"	"12"	"118"	"782515.963500977"	"HCD"	"MS2"	"0"	"16.7"	"100.000"	"92.8279"	"32695"	"32695"	"32679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"15.7"	""	"22.5"	""	"34.2"	""	"31.6"	"31.4"	""	"506"	"35"	"34.000"	"27.000"	"0.00803749139874392"	"16"	"0"	"2.382E-05"	"0.782"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTITTFEHAHNMR"	"[K].tGTITTFEHAHNMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"461.98679"	"1844.92531"	"1844.92748"	"-1.18"	"-0.00054"	"13/122"	"13"	"122"	"6661081.92504883"	"HCD"	"MS2"	"32.64504"	"82.4"	"100.000"	"42.5086"	"12277"	"12277"	"12254"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"125.9"	""	"113.2"	""	"105.6"	""	"123.6"	""	"152.9"	"159.7"	""	"890"	"42"	"36.000"	"29.000"	"0.00277562001789677"	"15"	"0"	"8.51E-06"	"0.874"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTITTFEHAHNMR"	"[K].tGTITTFEHAHNMR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"4"	"4"	"0.9211"	"0.0000"	"1"	"1"	"1"	"461.98721"	"1844.92702"	"1844.92748"	"-0.25"	"-0.00011"	"13/122"	"13"	"122"	"7487064.98876953"	"HCD"	"MS2"	"11.57966"	"78.9"	"100.000"	"42.3864"	"12261"	"12261"	"12242"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.6"	""	"108.1"	""	"110.0"	""	"110.1"	""	"155.0"	"153.5"	""	"901"	"38"	"36.000"	"29.000"	"0.00697741886820072"	"18"	"0"	"4.542E-05"	"0.724"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8889"	"0.0000"	"1"	"1"	"1"	"923.00220"	"1844.99712"	"1844.99892"	"-0.97"	"-0.00090"	"6/128"	"6"	"128"	"134426.51171875"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"111.9520"	"40314"	"40314"	"40298"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.4"	""	"7.2"	""	"7.2"	""	"6.4"	""	"12.7"	"14.3"	""	"1108"	"27"	"37.000"	"30.000"	"0.104835836472932"	"18"	"9.9E-05"	"0.0005469"	"0.502"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTMDSVR.[S]"	"N-Term(TMT6plex)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.8364"	"0.0000"	"1"	"1"	"1"	"923.00256"	"1844.99785"	"1844.99892"	"-0.58"	"-0.00053"	"13/128"	"13"	"128"	"372848.451843262"	"HCD"	"MS2"	"0"	"17.1"	"100.000"	"111.8571"	"40262"	"40262"	"40247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"28.8"	""	"25.3"	""	"14.8"	""	"28.6"	"38.2"	""	"1120"	"55"	"37.000"	"30.000"	"0.000175060444558941"	"25"	"0"	"1.482E-06"	"1.03"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6552"	"0.0000"	"1"	"1"	"1"	"616.32996"	"1846.97531"	"1846.97818"	"-1.55"	"-0.00096"	"11/128"	"11"	"128"	"293970.508483887"	"HCD"	"MS2"	"16.39779"	"10.0"	"100.000"	"100.8823"	"35923"	"35923"	"35906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"9.9"	""	"14.4"	""	"18.7"	""	"20.1"	"18.7"	""	"1132"	"29"	"37.000"	"30.000"	"0.0640938605591325"	"24"	"0"	"0.0003724"	"0.536"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.4483"	"0.0000"	"1"	"1"	"1"	"616.33008"	"1846.97568"	"1846.97818"	"-1.35"	"-0.00083"	"10/128"	"10"	"128"	"228923.844726563"	"HCD"	"MS2"	"17.71652"	"8.7"	"100.000"	"103.9855"	"37175"	"37175"	"37149"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.8"	""	"10.3"	""	"9.8"	""	"13.2"	""	"19.1"	"17.9"	""	"1137"	"29"	"37.000"	"30.000"	"0.0642288977491486"	"30"	"0"	"0.0001602"	"0.612"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"616.33014"	"1846.97586"	"1846.97818"	"-1.25"	"-0.00077"	"7/128"	"7"	"128"	"340911.158447266"	"HCD"	"MS2"	"46.96469"	"13.5"	"100.000"	"105.1263"	"37627"	"37627"	"37610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.6"	""	"19.2"	""	"20.1"	""	"25.4"	""	"27.1"	"19.8"	""	"1138"	"21"	"37.000"	"30.000"	"0.486532959631385"	"23"	"0"	"0.0001628"	"0.61"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"616.33020"	"1846.97605"	"1846.97818"	"-1.15"	"-0.00071"	"9/128"	"9"	"128"	"234854.170227051"	"HCD"	"MS2"	"58.84429"	"7.2"	"100.000"	"106.5321"	"38204"	"38204"	"38192"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"8.6"	""	"9.0"	""	"14.3"	""	"9.9"	"16.6"	""	"1140"	"15"	"37.000"	"30.000"	"1.78597286285988"	"15"	"0.0001686"	"0.001094"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6154"	"0.0000"	"1"	"1"	"1"	"616.33032"	"1846.97641"	"1846.97818"	"-0.96"	"-0.00059"	"6/128"	"6"	"128"	"608350.375793457"	"HCD"	"MS2"	"50.13984"	"18.0"	"100.000"	"102.5757"	"36608"	"36608"	"36577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.8"	""	"18.2"	""	"19.9"	""	"34.9"	""	"33.8"	"40.0"	""	"1137"	"13"	"37.000"	"30.000"	"2.82312734744516"	"19"	"9.9E-05"	"0.0006928"	"0.481"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"616.33051"	"1846.97696"	"1846.97818"	"-0.66"	"-0.00041"	"7/128"	"7"	"128"	"250675.608886719"	"HCD"	"MS2"	"15.93252"	"8.1"	"100.000"	"104.8444"	"37515"	"37515"	"37494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"12.3"	""	"8.8"	""	"14.0"	""	"15.7"	"14.1"	""	"1146"	"32"	"37.000"	"30.000"	"0.0369959873236857"	"30"	"0"	"1.092E-05"	"0.852"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.4667"	"0.0000"	"1"	"1"	"1"	"616.33057"	"1846.97715"	"1846.97818"	"-0.56"	"-0.00034"	"11/128"	"11"	"128"	"233027.379089355"	"HCD"	"MS2"	"50.06735"	"9.5"	"100.000"	"105.7813"	"37890"	"37890"	"37865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"9.6"	""	"11.6"	""	"18.0"	""	"19.8"	"19.6"	""	"1144"	"15"	"37.000"	"30.000"	"1.92928340552873"	"21"	"0"	"0.0001788"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.99237"	"1846.97746"	"1846.97818"	"-0.39"	"-0.00036"	"4/128"	"4"	"128"	"62223.3192749023"	"HCD"	"MS2"	"33.00835"	"3.2"	"100.000"	"102.7188"	"36666"	"36666"	"36638"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.9"	""	"3.5"	""	"4.0"	""	"4.5"	""	"7.6"	"6.1"	""	"1143"	"2"	"37.000"	"30.000"	"38.1958548890464"	"13"	"0.001615"	"0.0144"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6038"	"0.0000"	"1"	"1"	"1"	"616.33075"	"1846.97770"	"1846.97818"	"-0.26"	"-0.00016"	"15/128"	"15"	"128"	"948213.515808105"	"HCD"	"MS2"	"10.15705"	"12.7"	"100.000"	"100.2548"	"35668"	"35668"	"35649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.5"	""	"14.2"	""	"20.0"	""	"22.8"	""	"26.8"	"24.3"	""	"1165"	"53"	"37.000"	"30.000"	"0.000301505979611206"	""	"0"	"4.567E-06"	"0.93"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5574"	"0.0000"	"1"	"1"	"1"	"616.33081"	"1846.97788"	"1846.97818"	"-0.16"	"-0.00010"	"16/128"	"16"	"128"	"1113702.44445801"	"HCD"	"MS2"	"8.31004"	"13.0"	"100.000"	"100.3735"	"35744"	"35744"	"35722"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.3"	""	"14.9"	""	"17.8"	""	"23.5"	""	"23.4"	"24.8"	""	"1163"	"61"	"37.000"	"30.000"	"4.34059953015454E-05"	""	"0"	"2.87E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"616.33081"	"1846.97788"	"1846.97818"	"-0.16"	"-0.00010"	"17/128"	"17"	"128"	"3765654.64526367"	"HCD"	"MS2"	"2.202097"	"24.1"	"100.000"	"100.5524"	"35789"	"35789"	"35771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.5"	""	"28.3"	""	"39.0"	""	"52.0"	""	"39.2"	"36.8"	""	"1163"	"60"	"37.000"	"30.000"	"5.31556849914951E-05"	""	"0"	"5.499E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"616.33099"	"1846.97843"	"1846.97818"	"0.13"	"0.00008"	"9/128"	"9"	"128"	"171951.013000488"	"HCD"	"MS2"	"47.53258"	"8.0"	"100.000"	"106.0665"	"38002"	"38002"	"37988"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.1"	""	"5.7"	""	"13.4"	""	"17.7"	""	"12.0"	"16.1"	""	"1168"	"24"	"37.000"	"30.000"	"0.210093611730953"	"25"	"0"	"0.0001449"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"923.99292"	"1846.97856"	"1846.97818"	"0.21"	"0.00019"	"12/128"	"12"	"128"	"682826.715698242"	"HCD"	"MS2"	"0"	"21.0"	"100.000"	"100.5872"	"35804"	"35804"	"35787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"25.0"	""	"39.0"	""	"41.2"	""	"35.2"	"27.3"	""	"1171"	"65"	"37.000"	"30.000"	"1.65778001354054E-05"	""	"0"	"8.13E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.6290"	"0.0000"	"1"	"1"	"1"	"616.33105"	"1846.97861"	"1846.97818"	"0.23"	"0.00014"	"17/128"	"17"	"128"	"3768637.4152832"	"HCD"	"MS2"	"2.14729"	"23.3"	"100.000"	"100.6645"	"35863"	"35863"	"35848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.6"	""	"30.7"	""	"34.6"	""	"49.3"	""	"47.0"	"36.3"	""	"1171"	"62"	"37.000"	"30.000"	"3.99509305419948E-05"	""	"0"	"1.632E-06"	"1.022"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"923.99304"	"1846.97881"	"1846.97818"	"0.34"	"0.00031"	"4/128"	"4"	"128"	"57468.746887207"	"HCD"	"MS2"	"0"	"1.7"	"100.000"	"103.0947"	"36819"	"36819"	"36794"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.2"	""	"4.8"	""	"2.1"	""	""	""	"2.3"	"2.3"	""	"1163"	"8"	"37.000"	"30.000"	"9.92086909205317"	"13"	"0.001615"	"0.01341"	"0.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.5806"	"0.0000"	"1"	"1"	"1"	"923.99304"	"1846.97881"	"1846.97818"	"0.34"	"0.00031"	"9/128"	"9"	"128"	"716078.119506836"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"100.6690"	"35864"	"35864"	"35848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.0"	""	"29.3"	""	"38.2"	""	"50.6"	""	"30.9"	"33.5"	""	"1163"	"62"	"37.000"	"30.000"	"3.35389698462594E-05"	""	"0"	"3.15E-06"	"0.963"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"923.99310"	"1846.97893"	"1846.97818"	"0.41"	"0.00037"	"8/128"	"8"	"128"	"284400.985778809"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"100.2871"	"35681"	"35681"	"35660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"13.7"	""	"13.1"	""	"26.4"	""	"13.1"	"15.6"	""	"1162"	"57"	"37.000"	"30.000"	"0.000112765469488141"	""	"0"	"2.587E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"616.33118"	"1846.97898"	"1846.97818"	"0.43"	"0.00027"	"8/128"	"8"	"128"	"193117.423278809"	"HCD"	"MS2"	"18.29044"	"6.4"	"100.000"	"105.0938"	"37633"	"37633"	"37614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"11.8"	""	"7.9"	""	"9.4"	""	"12.0"	"11.5"	""	"1163"	"10"	"37.000"	"30.000"	"6.31756500133324"	"15"	"0.0007633"	"0.007296"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"616.33136"	"1846.97953"	"1846.97818"	"0.73"	"0.00045"	"8/128"	"8"	"128"	"248523.290283203"	"HCD"	"MS2"	"24.52041"	"9.3"	"100.000"	"106.1125"	"38041"	"38041"	"38018"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.2"	""	"11.3"	""	"14.9"	""	"17.3"	""	"15.5"	"18.0"	""	"1175"	"16"	"37.000"	"30.000"	"1.59958701849577"	"16"	"0"	"0.0001654"	"0.609"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"616.33142"	"1846.97971"	"1846.97818"	"0.83"	"0.00051"	"7/128"	"7"	"128"	"293465.439025879"	"HCD"	"MS2"	"46.76775"	"11.8"	"100.000"	"101.1793"	"36070"	"36070"	"36047"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"15.7"	""	"13.1"	""	"20.5"	""	"23.6"	"23.2"	""	"1175"	"6"	"37.000"	"30.000"	"14.622036744909"	"14"	"0.006777"	"0.08431"	"0.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.4706"	"0.0000"	"1"	"1"	"1"	"923.99365"	"1846.98003"	"1846.97818"	"1.00"	"0.00092"	"5/128"	"5"	"128"	"74146.5606079102"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"100.9645"	"35984"	"35984"	"35965"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.8"	""	"5.8"	""	"2.8"	""	"3.5"	""	"4.3"	""	""	"1175"	"17"	"37.000"	"30.000"	"1.21901169150476"	"23"	"0.0005161"	"0.006773"	"0.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.2667"	"0.0000"	"1"	"1"	"1"	"616.33154"	"1846.98008"	"1846.97818"	"1.03"	"0.00063"	"5/128"	"5"	"128"	"219918.965820313"	"HCD"	"MS2"	"48.22342"	"8.9"	"100.000"	"106.5794"	"38205"	"38205"	"38180"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"11.6"	""	"13.9"	""	"14.7"	""	"15.4"	"16.3"	""	"1171"	"15"	"37.000"	"30.000"	"1.68471677182774"	"25"	"9.9E-05"	"0.0004392"	"0.522"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"2"	"2"	"0.5957"	"0.0000"	"1"	"1"	"1"	"923.99377"	"1846.98027"	"1846.97818"	"1.13"	"0.00105"	"9/128"	"9"	"128"	"230899.921875"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"100.3827"	"35748"	"35748"	"35722"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"11.2"	""	"12.3"	""	"19.7"	""	"11.5"	"13.4"	""	"1168"	"47"	"37.000"	"30.000"	"0.0011598794317367"	""	"0"	"1.116E-05"	"0.85"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVLVDLEPGTMDSVR"	"[R].aVLVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"Q6P9T8"	"Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"616.33270"	"1846.98355"	"1846.97818"	"2.91"	"0.00179"	"6/128"	"6"	"128"	"419165.816101074"	"HCD"	"MS2"	"44.22722"	"16.1"	"100.000"	"102.8971"	"36760"	"36760"	"36733"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"21.7"	""	"18.1"	""	"35.7"	""	"23.3"	"34.2"	""	"1164"	"13"	"37.000"	"30.000"	"2.89682983457741"	"21"	"9.9E-05"	"0.0007216"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"616.34460"	"1847.01926"	"1847.02025"	"-0.54"	"-0.00033"	"10/108"	"10"	"108"	"519040.677307129"	"HCD"	"MS2"	"35.84526"	"14.7"	"100.000"	"102.4027"	"36562"	"36562"	"36543"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"18.0"	""	"22.0"	""	"24.9"	""	"25.6"	"26.7"	""	"1170"	"27"	"37.000"	"30.000"	"0.110193471735153"	"16"	"0.0001991"	"0.003762"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"616.34540"	"1847.02164"	"1847.02025"	"0.75"	"0.00046"	"13/108"	"13"	"108"	"843636.119689941"	"HCD"	"MS2"	"40.28737"	"20.0"	"100.000"	"102.2270"	"36468"	"36468"	"36443"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.3"	""	"26.0"	""	"34.5"	""	"27.6"	""	"35.0"	"34.2"	""	"1148"	"15"	"37.000"	"30.000"	"1.73345228751076"	"14"	"0"	"0.0001762"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"616.34564"	"1847.02237"	"1847.02025"	"1.15"	"0.00071"	"7/108"	"7"	"108"	"586106.295288086"	"HCD"	"MS2"	"25.90414"	"14.8"	"100.000"	"102.6892"	"36676"	"36676"	"36660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"17.2"	""	"25.0"	""	"23.1"	""	"25.7"	"29.4"	""	"1183"	"12"	"37.000"	"30.000"	"3.67244033747082"	"15"	"0.0001991"	"0.003082"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.8333"	"0.0000"	"1"	"1"	"1"	"924.01483"	"1847.02239"	"1847.02025"	"1.16"	"0.00107"	"8/108"	"8"	"108"	"141827.763793945"	"HCD"	"MS2"	"100"	"8.0"	"100.000"	"102.4812"	"36594"	"36594"	"36566"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.0"	""	"9.1"	""	"11.7"	""	"12.3"	""	"14.9"	"13.1"	""	"1183"	"18"	"37.000"	"30.000"	"0.893212411188093"	"17"	"0.0001991"	"0.004371"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEIIPVAPDYDK"	"[R].eEIIPVAPDYDk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"P08503"	"Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadm PE=1 SV=1"	"0"	"2"	"2"	"0.9130"	"0.0000"	"1"	"1"	"1"	"924.01544"	"1847.02361"	"1847.02025"	"1.82"	"0.00168"	"7/108"	"7"	"108"	"154651.829162598"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"102.2639"	"36483"	"36483"	"36459"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.1"	""	"9.8"	""	"15.1"	""	"10.2"	""	"19.9"	"15.2"	""	"1165"	"23"	"37.000"	"30.000"	"0.326058802870902"	"16"	"0.0009352"	"0.008051"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VNDDLISEFPDK"	"[R].vNDDLISEFPDk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"Q62696"	"Disks large homolog 1 OS=Rattus norvegicus OX=10116 GN=Dlg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"617.33661"	"1849.99527"	"1849.99477"	"0.27"	"0.00017"	"5/124"	"5"	"124"	"159297.109619141"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"109.4232"	"39282"	"39282"	"39267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"7.3"	""	"6.7"	""	"12.7"	""	"13.5"	"12.1"	""	"1307"	"10"	"38.000"	"31.000"	"7.29870132424597"	"18"	"0.002189"	"0.02049"	"0.177"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VEESSWLIEDGK"	"[K].vEESSWLIEDGk.[V]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"Q63525"	"Nuclear migration protein nudC OS=Rattus norvegicus OX=10116 GN=Nudc PE=1 SV=1"	"0"	"3"	"3"	"0.4091"	"0.0000"	"1"	"1"	"1"	"617.33765"	"1849.99839"	"1849.99477"	"1.96"	"0.00121"	"7/104"	"7"	"104"	"249866.718322754"	"HCD"	"MS2"	"20.49256"	"11.7"	"100.000"	"105.4452"	"37772"	"37772"	"37751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"15.5"	""	"11.9"	""	"23.5"	""	"25.6"	"22.7"	""	"1298"	"22"	"38.000"	"31.000"	"0.40573707761142"	"27"	"0.0001686"	"0.001097"	"0.44"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"617.67590"	"1851.01316"	"1851.01734"	"-2.26"	"-0.00140"	"8/140"	"8"	"140"	"326049.89831543"	"HCD"	"MS2"	"7.434432"	"10.4"	"100.000"	"83.7068"	"28993"	"28993"	"28972"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.4"	""	"16.3"	""	"12.0"	""	"16.8"	""	"16.5"	"22.7"	""	"1139"	"37"	"37.000"	"30.000"	"0.0124593024483927"	"20"	"0"	"0.0001787"	"0.602"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"617.67645"	"1851.01480"	"1851.01734"	"-1.37"	"-0.00085"	"10/140"	"10"	"140"	"477573.014343262"	"HCD"	"MS2"	"13.87571"	"15.4"	"100.000"	"84.0299"	"29123"	"29123"	"29101"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"22.4"	""	"16.3"	""	"32.1"	""	"30.8"	"27.6"	""	"1122"	"39"	"37.000"	"30.000"	"0.0068385316499685"	"21"	"0"	"0.000125"	"0.634"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVQPTLDLTEAELR"	"[R].hVQPTLDLTEAELR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"617.67780"	"1851.01883"	"1851.01734"	"0.81"	"0.00050"	"10/140"	"10"	"140"	"477547.429931641"	"HCD"	"MS2"	"6.245223"	"12.5"	"100.000"	"83.8168"	"29066"	"29066"	"29048"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"18.0"	""	"19.1"	""	"18.7"	""	"23.6"	"21.8"	""	"1087"	"50"	"37.000"	"30.000"	"0.000532352807069628"	"24"	"0"	"1.407E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFSDGHSEFLK"	"[R].dLFSDGHSEFLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.33167"	"1852.98044"	"1852.98453"	"-2.21"	"-0.00136"	"11/104"	"11"	"104"	"838638.239318848"	"HCD"	"MS2"	"26.77014"	"37.6"	"100.000"	"99.9731"	"35554"	"35554"	"35524"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.1"	""	"43.8"	""	"44.8"	""	"76.8"	""	"73.9"	"67.1"	""	"1169"	"32"	"37.000"	"30.000"	"0.040251726721323"	"14"	"0"	"0.0001755"	"0.604"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLFSDGHSEFLK"	"[R].dLFSDGHSEFLk.[A]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"618.33295"	"1852.98429"	"1852.98453"	"-0.13"	"-0.00008"	"10/104"	"10"	"104"	"624679.714172363"	"HCD"	"MS2"	"24.59164"	"28.7"	"100.000"	"100.0482"	"35612"	"35612"	"35586"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.8"	""	"30.7"	""	"36.7"	""	"51.0"	""	"54.3"	"61.3"	""	"1173"	"26"	"37.000"	"30.000"	"0.154265217724664"	"14"	"0"	"0.0003436"	"0.543"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QSFTMVADTPENLR"	"[K].qSFTmVADTPENLR.[L]"	"N-Term(TMT6plex); M5(Oxidation)"	"1"	"1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"Q99MZ8"	"LIM and SH3 domain protein 1 OS=Rattus norvegicus OX=10116 GN=Lasp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5556"	"0.0000"	"1"	"1"	"1"	"618.64642"	"1853.92472"	"1853.92648"	"-0.95"	"-0.00059"	"6/148"	"6"	"148"	"151882.867675781"	"HCD"	"MS2"	"12.05245"	"9.4"	"100.000"	"76.1473"	"25933"	"25933"	"25909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"15.6"	""	"11.4"	""	"14.3"	""	"16.2"	"22.0"	""	"899"	"9"	"36.000"	"29.000"	"6.26223982923913"	"17"	"0.001348"	"0.011"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.01166"	"1855.02042"	"1855.02131"	"-0.48"	"-0.00030"	"15/122"	"15"	"122"	"6329906.69464111"	"HCD"	"MS2"	"1.168518"	"214.7"	"100.000"	"61.8787"	"20142"	"20142"	"20127"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"337.7"	""	"280.1"	""	"298.1"	""	"349.7"	"10.3"	"379.2"	"377.1"	""	"1036"	"33"	"37.000"	"30.000"	"0.0263226591246371"	"15"	"0"	"6.185E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.01392"	"1855.02056"	"1855.02131"	"-0.41"	"-0.00038"	"13/122"	"13"	"122"	"469818.219421387"	"HCD"	"MS2"	"0"	"31.4"	"100.000"	"61.9050"	"20186"	"20186"	"20161"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"40.1"	""	"40.6"	""	"47.6"	""	"56.1"	"60.6"	""	"1036"	"47"	"37.000"	"30.000"	"0.0010146815408761"	"16"	"0"	"0.000396"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8909"	"0.0000"	"1"	"1"	"1"	"619.01172"	"1855.02060"	"1855.02131"	"-0.38"	"-0.00024"	"14/122"	"14"	"122"	"2859279.09472656"	"HCD"	"MS2"	"44.23847"	"90.1"	"100.000"	"61.5664"	"20049"	"20049"	"20022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"139.8"	""	"114.2"	""	"124.1"	""	"143.6"	""	"152.8"	"179.5"	""	"1041"	"55"	"37.000"	"30.000"	"0.000159008643942868"	"22"	"0"	"0.000239"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.01422"	"1855.02117"	"1855.02131"	"-0.08"	"-0.00007"	"8/122"	"8"	"122"	"432153.010070801"	"HCD"	"MS2"	"0"	"30.8"	"100.000"	"61.9586"	"20174"	"20174"	"20151"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.8"	""	"40.6"	""	"47.8"	""	"51.2"	""	"49.5"	"55.3"	""	"1042"	"40"	"37.000"	"30.000"	"0.00497551137317168"	"15"	"9.9E-05"	"0.0005706"	"0.498"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"619.01196"	"1855.02134"	"1855.02131"	"0.01"	"0.00001"	"15/122"	"15"	"122"	"2791064.74072266"	"HCD"	"MS2"	"24.30489"	"92.8"	"100.000"	"61.5919"	"20026"	"20026"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"143.7"	""	"124.0"	""	"130.0"	""	"153.1"	""	"159.3"	"169.3"	""	"1042"	"52"	"37.000"	"30.000"	"0.000341851683743814"	"19"	"0"	"0.0002127"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.01471"	"1855.02214"	"1855.02131"	"0.45"	"0.00041"	"8/122"	"8"	"122"	"257495.700195313"	"HCD"	"MS2"	"23.4493"	"15.3"	"100.000"	"61.5755"	"20053"	"20053"	"20022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"24.6"	""	"20.3"	""	"26.7"	""	"23.6"	"25.8"	""	"1043"	"39"	"37.000"	"30.000"	"0.00662604395866254"	"15"	"0"	"0.0003145"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SEPIPETNEGPVK"	"[K].sEPIPETNEGPVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.01672"	"1855.02617"	"1855.02131"	"2.62"	"0.00243"	"12/122"	"12"	"122"	"292059.183349609"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"61.6148"	"20036"	"20036"	"20005"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.0"	""	"32.8"	""	"25.7"	""	"34.3"	""	"38.0"	"29.1"	""	"1024"	"39"	"37.000"	"30.000"	"0.0071658870915718"	"15"	"0.0001686"	"0.001069"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGIDDLTGEPLIQR"	"[K].tVGIDDLTGEPLIQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.8955"	"0.0000"	"1"	"1"	"1"	"619.34851"	"1856.03098"	"1856.03266"	"-0.90"	"-0.00056"	"15/132"	"15"	"132"	"486641.720275879"	"HCD"	"MS2"	"7.174384"	"9.0"	"100.000"	"110.3624"	"39667"	"39667"	"39644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"11.5"	""	"12.5"	""	"14.3"	""	"18.2"	"17.0"	""	"1072"	"67"	"37.000"	"30.000"	"1.16994323274785E-05"	"24"	"0"	"8.211E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGIDDLTGEPLIQR"	"[K].tVGIDDLTGEPLIQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"0.9333"	"0.0000"	"1"	"1"	"1"	"928.52014"	"1856.03301"	"1856.03266"	"0.19"	"0.00017"	"12/132"	"12"	"132"	"107261.00592041"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"110.3739"	"39672"	"39672"	"39644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.7"	""	"4.4"	""	"10.8"	""	"7.2"	""	"11.2"	"10.9"	""	"1089"	"30"	"37.000"	"30.000"	"0.0490905484426444"	"16"	"0.0001686"	"0.001589"	"0.407"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGIDDLTGEPLIQR"	"[K].tVGIDDLTGEPLIQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"619.34937"	"1856.03354"	"1856.03266"	"0.48"	"0.00029"	"16/132"	"16"	"132"	"675251.498962402"	"HCD"	"MS2"	"10.46942"	"10.6"	"100.000"	"110.1937"	"39585"	"39585"	"39565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.0"	""	"13.6"	""	"17.3"	""	"16.7"	""	"17.3"	"18.0"	""	"1084"	"60"	"37.000"	"30.000"	"5.80763463438783E-05"	"26"	"0"	"1.279E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TVGIDDLTGEPLIQR"	"[K].tVGIDDLTGEPLIQR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"928.52063"	"1856.03398"	"1856.03266"	"0.71"	"0.00066"	"8/132"	"8"	"132"	"130213.372314453"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"110.1983"	"39587"	"39587"	"39565"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"9.8"	""	"9.5"	""	"12.0"	""	"9.6"	"13.3"	""	"1083"	"15"	"37.000"	"30.000"	"1.9168956019668"	"13"	"0.0009352"	"0.008213"	"0.259"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQQAEPLVVDLK"	"[K].tGQQAEPLVVDLk.[D]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"O88797"	"Disabled homolog 2 OS=Rattus norvegicus OX=10116 GN=Dab2 PE=1 SV=1"	"0"	"3"	"3"	"0.7353"	"0.0000"	"1"	"1"	"1"	"619.36792"	"1856.08921"	"1856.08933"	"-0.07"	"-0.00004"	"10/136"	"10"	"136"	"314836.358581543"	"HCD"	"MS2"	"31.74699"	"13.2"	"100.000"	"98.5202"	"34995"	"34995"	"34967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.2"	""	"19.5"	""	"19.1"	""	"22.7"	""	"19.3"	"25.4"	""	"707"	"34"	"35.000"	"28.000"	"0.0138480753557601"	"24"	"0"	"9.407E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTEAPAAGPEAK"	"[K].kTEAPAAGPEAk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.70612"	"1857.10379"	"1857.10487"	"-0.58"	"-0.00036"	"9/126"	"9"	"126"	"1148409.34216309"	"HCD"	"MS2"	"17.25082"	"67.6"	"100.000"	"35.1213"	"9322"	"9322"	"9304"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"100.5"	""	"76.5"	""	"75.7"	""	"116.5"	""	"143.7"	"133.2"	""	"568"	"12"	"34.000"	"27.000"	"1.89373122456669"	"13"	"0"	"0.0001958"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTEAPAAGPEAK"	"[K].kTEAPAAGPEAk.[S]"	"N-Term(TMT6plex); K1(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"Q05175"	"Brain acid soluble protein 1 OS=Rattus norvegicus OX=10116 GN=Basp1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"619.70691"	"1857.10617"	"1857.10487"	"0.70"	"0.00043"	"8/126"	"8"	"126"	"912115.863891602"	"HCD"	"MS2"	"26.93443"	"51.1"	"100.000"	"35.3508"	"9377"	"9377"	"9358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.1"	""	"57.1"	""	"61.8"	""	"92.0"	""	"110.5"	"95.2"	""	"556"	"23"	"34.000"	"27.000"	"0.147246437401881"	"14"	"0"	"3.751E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAEREIVR"	"[R].gYSFTTTAEREIVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.33344"	"1858.98575"	"1858.98604"	"-0.16"	"-0.00010"	"10/128"	"10"	"128"	"492369.940063477"	"HCD"	"MS2"	"18.95273"	"23.2"	"100.000"	"74.8337"	"25399"	"25399"	"25375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.8"	""	"31.1"	""	"31.7"	""	"39.0"	""	"40.3"	"47.2"	""	"1214"	"17"	"37.000"	"30.000"	"1.23364070563829"	"14"	"0.0001686"	"0.001129"	"0.437"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAEREIVR"	"[R].gYSFTTTAEREIVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"620.33380"	"1858.98685"	"1858.98604"	"0.43"	"0.00027"	"6/128"	"6"	"128"	"858741.671508789"	"HCD"	"MS2"	"4.654861"	"36.2"	"100.000"	"75.3141"	"25625"	"25625"	"25607"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.9"	""	"51.5"	""	"60.4"	""	"46.1"	""	"66.3"	"64.7"	""	"1197"	"25"	"37.000"	"30.000"	"0.172609285462127"	"23"	"0"	"0.0002601"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAEREIVR"	"[R].gYSFTTTAEREIVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.33392"	"1858.98722"	"1858.98604"	"0.63"	"0.00039"	"11/128"	"11"	"128"	"1005264.11187744"	"HCD"	"MS2"	"7.026305"	"43.6"	"100.000"	"75.1452"	"25525"	"25525"	"25505"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"62.6"	""	"66.2"	""	"62.3"	""	"83.6"	"80.6"	""	"1198"	"25"	"37.000"	"30.000"	"0.19427943079226"	"14"	"0"	"0.0001155"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYSFTTTAEREIVR"	"[R].gYSFTTTAEREIVR.[D]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.33405"	"1858.98758"	"1858.98604"	"0.83"	"0.00051"	"9/128"	"9"	"128"	"363523.538146973"	"HCD"	"MS2"	"40.17274"	"21.1"	"100.000"	"74.9684"	"25485"	"25485"	"25459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"28.1"	""	"27.4"	""	"31.5"	""	"35.3"	"47.2"	""	"1198"	"6"	"37.000"	"30.000"	"13.5652194024824"	"13"	"0.001488"	"0.01242"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQQVEASLQPETLR"	"[K].mQQVEASLQPETLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.5909"	"0.0000"	"1"	"1"	"1"	"620.33441"	"1858.98868"	"1858.98941"	"-0.39"	"-0.00024"	"11/142"	"11"	"142"	"300965.736816406"	"HCD"	"MS2"	"12.00076"	"6.7"	"100.000"	"96.6897"	"34255"	"34255"	"34235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.3"	""	"10.3"	""	"9.2"	""	"7.5"	""	"14.8"	"12.9"	""	"1201"	"44"	"37.000"	"30.000"	"0.00241275381914788"	""	"0"	"1.605E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQQVEASLQPETLR"	"[K].mQQVEASLQPETLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"P09006"	"Serine protease inhibitor A3N OS=Rattus norvegicus OX=10116 GN=Serpina3n PE=1 SV=3"	"0"	"3"	"3"	"0.7447"	"0.0000"	"1"	"1"	"1"	"620.33453"	"1858.98905"	"1858.98941"	"-0.20"	"-0.00012"	"14/142"	"14"	"142"	"453708.45501709"	"HCD"	"MS2"	"16.88385"	"7.5"	"100.000"	"96.5647"	"34174"	"34174"	"34149"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"7.4"	""	"10.5"	""	"9.8"	""	"15.0"	"15.8"	""	"1198"	"47"	"37.000"	"30.000"	"0.00128063929161184"	"27"	"0"	"2.659E-07"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQPHLDEFQEK"	"[K].mQPHLDEFQEk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.66199"	"1859.97141"	"1859.97259"	"-0.64"	"-0.00039"	"8/106"	"8"	"106"	"4124041.12915039"	"HCD"	"MS2"	"16.70909"	"115.9"	"100.000"	"69.8430"	"23375"	"23375"	"23358"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"176.3"	""	"126.5"	""	"119.7"	""	"151.9"	"0.3"	"258.2"	"269.0"	""	"1148"	"43"	"37.000"	"30.000"	"0.0029101266654968"	"15"	"0"	"1.093E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQPHLDEFQEK"	"[K].mQPHLDEFQEk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.66211"	"1859.97177"	"1859.97259"	"-0.44"	"-0.00027"	"12/106"	"12"	"106"	"2089915.85784912"	"HCD"	"MS2"	"46.98976"	"73.6"	"100.000"	"69.7317"	"23363"	"23363"	"23340"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.4"	""	"92.1"	""	"70.1"	""	"107.0"	"0.7"	"177.5"	"142.0"	""	"1134"	"27"	"37.000"	"30.000"	"0.110048229259511"	"14"	"0"	"6.018E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQPHLDEFQEK"	"[K].mQPHLDEFQEk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"620.66248"	"1859.97287"	"1859.97259"	"0.15"	"0.00009"	"8/106"	"8"	"106"	"3747837.92840576"	"HCD"	"MS2"	"18.53256"	"113.0"	"100.000"	"70.0266"	"23483"	"23483"	"23465"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"162.7"	""	"128.8"	""	"117.0"	""	"153.0"	""	"268.9"	"244.0"	""	"1158"	"40"	"37.000"	"30.000"	"0.00593852465299565"	"19"	"0"	"7.271E-07"	"1.094"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQPHLDEFQEK"	"[K].mQPHLDEFQEk.[W]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"P04639"	"Apolipoprotein A-I OS=Rattus norvegicus OX=10116 GN=Apoa1 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"620.66272"	"1859.97361"	"1859.97259"	"0.55"	"0.00034"	"13/106"	"13"	"106"	"1624610.24401855"	"HCD"	"MS2"	"67.72426"	"61.6"	"100.000"	"69.5616"	"23260"	"23260"	"23235"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"100.9"	""	"73.2"	""	"75.5"	""	"89.2"	""	"124.0"	"121.4"	""	"1161"	"30"	"37.000"	"30.000"	"0.0576503866108352"	"16"	"0"	"9.419E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGTITTFEHAHNMR"	"[K].tGTITTFEHAHNmR.[V]"	"N-Term(TMT6plex); M13(Oxidation)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"465.98550"	"1860.92019"	"1860.92240"	"-1.19"	"-0.00055"	"11/122"	"11"	"122"	"10029808.4005737"	"HCD"	"MS2"	"46.99786"	"226.1"	"100.000"	"34.0364"	"8847"	"8847"	"8831"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"288.2"	""	"288.9"	""	"256.8"	""	"435.7"	""	"430.2"	"450.2"	""	"822"	"21"	"36.000"	"29.000"	"0.319037564934392"	"14"	"0.0001686"	"0.001341"	"0.422"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGYHKPDQQK"	"[-].mEGYHkPDQQk.[L]"	"N-Term(Prot)(Acetyl); K6(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.99426"	"1860.96823"	"1860.96784"	"0.21"	"0.00013"	"5/102"	"5"	"102"	"1884655.13122559"	"HCD"	"MS2"	"2.986102"	"89.9"	"100.000"	"41.9379"	"12079"	"12079"	"12049"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"161.0"	""	"102.7"	""	"112.4"	""	"112.0"	""	"179.1"	"192.3"	""	"1137"	"12"	"37.000"	"30.000"	"3.68748675472174"	"13"	"0.0001686"	"0.001893"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MEGYHKPDQQK"	"[-].mEGYHkPDQQk.[L]"	"N-Term(Prot)(Acetyl); K6(TMT6plex); K11(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"620.99432"	"1860.96842"	"1860.96784"	"0.31"	"0.00019"	"10/102"	"10"	"102"	"2141250.27069092"	"HCD"	"MS2"	"29.60963"	"93.6"	"100.000"	"42.0741"	"12100"	"12100"	"12076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"180.0"	""	"104.7"	""	"105.2"	""	"112.4"	"1.5"	"187.6"	"195.8"	""	"1134"	"13"	"37.000"	"30.000"	"2.84828248259193"	"13"	"0.0001686"	"0.001279"	"0.426"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"621.00238"	"1860.99259"	"1860.99383"	"-0.67"	"-0.00041"	"6/128"	"6"	"128"	"717691.762817383"	"HCD"	"MS2"	"5.283895"	"9.9"	"100.000"	"107.0388"	"38405"	"38405"	"38390"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"8.8"	""	"12.7"	""	"15.4"	""	"22.3"	"24.3"	""	"1214"	"45"	"37.000"	"30.000"	"0.00211440750226859"	"17"	"0"	"1.311E-05"	"0.835"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9667"	"0.0000"	"1"	"1"	"1"	"931.00049"	"1860.99370"	"1860.99383"	"-0.07"	"-0.00007"	"12/128"	"12"	"128"	"159523.296630859"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"106.7713"	"38282"	"38282"	"38253"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"8.0"	""	"5.7"	""	"17.0"	""	"6.4"	"7.7"	""	"1227"	"60"	"37.000"	"30.000"	"6.54356720374763E-05"	"19"	"0"	"4.31E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9818"	"0.0000"	"1"	"1"	"1"	"931.00055"	"1860.99382"	"1860.99383"	"0.00"	"0.00000"	"12/128"	"12"	"128"	"262292.428833008"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"107.0515"	"38393"	"38393"	"38382"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"8.9"	""	"10.9"	""	"17.8"	""	"15.6"	"14.1"	""	"1225"	"55"	"37.000"	"30.000"	"0.000214835522795948"	"16"	"0"	"9.906E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9565"	"0.0000"	"1"	"1"	"1"	"621.00281"	"1860.99387"	"1860.99383"	"0.02"	"0.00001"	"9/128"	"9"	"128"	"739599.648010254"	"HCD"	"MS2"	"2.365591"	"8.9"	"100.000"	"106.7598"	"38277"	"38277"	"38253"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"6.6"	""	"12.3"	""	"14.4"	""	"19.8"	"21.1"	""	"1227"	"46"	"37.000"	"30.000"	"0.00169361451479118"	"17"	"0"	"6.663E-07"	"1.102"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"931.00073"	"1860.99419"	"1860.99383"	"0.19"	"0.00018"	"6/128"	"6"	"128"	"133713.859741211"	"HCD"	"MS2"	"0"	"5.0"	"100.000"	"107.0246"	"38400"	"38400"	"38377"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"7.0"	""	"8.0"	""	"11.3"	""	"9.7"	"6.7"	""	"1227"	"20"	"37.000"	"30.000"	"0.680478749163483"	"14"	"0.0004582"	"0.006454"	"0.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"931.00085"	"1860.99443"	"1860.99383"	"0.32"	"0.00030"	"13/128"	"13"	"128"	"276826.355529785"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"107.3115"	"38513"	"38513"	"38502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"12.9"	""	"11.1"	""	"21.1"	""	"13.2"	"12.9"	""	"1228"	"64"	"37.000"	"30.000"	"2.58921653105149E-05"	"20"	"0"	"3.079E-05"	"0.759"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"621.00311"	"1860.99479"	"1860.99383"	"0.51"	"0.00032"	"15/128"	"15"	"128"	"1442268.18011475"	"HCD"	"MS2"	"1.185001"	"13.0"	"100.000"	"107.0260"	"38383"	"38383"	"38375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.6"	""	"18.9"	""	"18.4"	""	"30.0"	""	"19.6"	"24.1"	""	"1238"	"49"	"37.000"	"30.000"	"0.000782871799084643"	"17"	"0"	"8.096E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AILVDLEPGTMDSVR"	"[R].aILVDLEPGTmDSVR.[S]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"4"	"P85108"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1"	"P85108; Q4QRB4; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-3 chain OS=Rattus norvegicus OX=10116 GN=Tubb3 PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"621.00317"	"1860.99497"	"1860.99383"	"0.61"	"0.00038"	"15/128"	"15"	"128"	"1658166.27111816"	"HCD"	"MS2"	"3.840078"	"14.3"	"100.000"	"107.3048"	"38511"	"38511"	"38502"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.1"	""	"24.1"	""	"15.7"	""	"34.6"	""	"25.4"	"21.8"	""	"1238"	"63"	"37.000"	"30.000"	"3.30134300306837E-05"	"19"	"0"	"1.307E-06"	"1.041"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDDKPETVIK"	"[R].eDDkPETVIk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"621.03394"	"1861.08725"	"1861.08856"	"-0.70"	"-0.00043"	"9/96"	"9"	"96"	"1805324.14923096"	"HCD"	"MS2"	"33.33579"	"121.5"	"100.000"	"52.7562"	"16438"	"16438"	"16416"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.7"	""	"130.9"	""	"151.3"	""	"212.2"	""	"233.3"	"237.6"	""	"828"	"12"	"36.000"	"29.000"	"2.71644140249403"	"16"	"9.9E-05"	"0.0008331"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDDKPETVIK"	"[R].eDDkPETVIk.[R]"	"N-Term(TMT6plex); K4(TMT6plex); K10(TMT6plex)"	"1"	"1"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"P29411"	"GTP:AMP phosphotransferase AK3, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ak3 PE=2 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"621.03436"	"1861.08854"	"1861.08856"	"-0.01"	"-0.00001"	"12/96"	"12"	"96"	"1880933.56640625"	"HCD"	"MS2"	"14.57555"	"125.2"	"100.000"	"52.4524"	"16348"	"16348"	"16326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"200.7"	""	"138.6"	""	"162.7"	""	"212.3"	""	"236.3"	"236.4"	""	"829"	"12"	"36.000"	"29.000"	"2.46334099746155"	"14"	"0.0001686"	"0.001848"	"0.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.61066"	"1862.81742"	"1862.81831"	"-0.48"	"-0.00030"	"4/116"	"4"	"116"	"2181034.70715332"	"HCD"	"MS2"	"6.915842"	"53.7"	"100.000"	"64.1900"	"21080"	"21080"	"21063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.8"	""	"63.9"	""	"81.5"	""	"85.1"	""	"110.4"	"106.2"	""	"212"	"7"	"30.000"	"23.000"	"2.24546280336341"	"13"	"0.0007633"	"0.007505"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YFDDHPNHPFTDE"	"[K].yFDDHPNHPFTDE.[-]"	"N-Term(TMT6plex)"	"1"	"1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"P23457"	"3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus OX=10116 GN=Akr1c9 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"621.61078"	"1862.81778"	"1862.81831"	"-0.28"	"-0.00018"	"5/116"	"5"	"116"	"1678790.79559326"	"HCD"	"MS2"	"0"	"37.8"	"100.000"	"64.0305"	"21049"	"21049"	"21033"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.0"	""	"48.2"	""	"43.2"	""	"53.9"	""	"81.3"	"78.4"	""	"217"	"10"	"30.000"	"23.000"	"1.08001487782641"	"13"	"0"	"0.0003972"	"0.531"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMGIPEDEQMGLLR"	"[R].imGIPEDEQmGLLR.[V]"	"N-Term(TMT6plex); M2(Oxidation); M10(Oxidation)"	"1"	"1"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"Q62812"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"621.65680"	"1862.95584"	"1862.95534"	"0.27"	"0.00017"	"6/118"	"6"	"118"	"218829.332519531"	"HCD"	"MS2"	"53.38779"	"9.8"	"100.000"	"97.4720"	"34572"	"34572"	"34544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"11.2"	""	"12.1"	""	"16.4"	""	"15.2"	"28.0"	""	"1123"	"9"	"37.000"	"30.000"	"7.0202044546725"	"15"	"0.008485"	"0.1076"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.9375"	"0.0000"	"1"	"1"	"1"	"932.02692"	"1863.04656"	"1863.04753"	"-0.52"	"-0.00049"	"8/118"	"8"	"118"	"105739.770080566"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"81.6593"	"28167"	"28167"	"28141"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"5.8"	""	"9.1"	""	"14.6"	""	"20.8"	"14.8"	""	"1091"	"16"	"37.000"	"30.000"	"1.37023404838848"	"14"	"0.0009964"	"0.008467"	"0.257"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"0.7941"	"0.0000"	"1"	"1"	"1"	"932.02722"	"1863.04717"	"1863.04753"	"-0.19"	"-0.00018"	"12/118"	"12"	"118"	"187459.023193359"	"HCD"	"MS2"	"0"	"15.3"	"100.000"	"81.9850"	"28299"	"28299"	"28279"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.3"	""	"12.9"	""	"17.3"	""	"27.1"	""	"36.4"	"29.5"	""	"1073"	"35"	"37.000"	"30.000"	"0.0190357383323813"	"22"	"9.9E-05"	"0.0005507"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.02759"	"1863.04790"	"1863.04753"	"0.20"	"0.00019"	"8/118"	"8"	"118"	"107135.691040039"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"81.7419"	"28229"	"28229"	"28200"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.6"	""	"8.5"	""	"10.5"	""	"17.1"	""	"19.2"	"18.1"	""	"1067"	"18"	"37.000"	"30.000"	"0.914396223555745"	"14"	"0.0001991"	"0.002572"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETVQTTEDQILK"	"[K].eTVQTTEDQILk.[R]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"932.02789"	"1863.04851"	"1863.04753"	"0.53"	"0.00049"	"10/118"	"10"	"118"	"192566.315002441"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"82.0517"	"28354"	"28354"	"28334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"20.7"	""	"11.8"	""	"30.7"	""	"34.9"	"34.5"	""	"1053"	"13"	"37.000"	"30.000"	"2.82747240788938"	"14"	"0.0001991"	"0.00511"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVYVNDAFGTAHR"	"[K].lGDVYVNDAFGTAHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"621.98956"	"1863.95414"	"1863.95508"	"-0.50"	"-0.00031"	"15/146"	"15"	"146"	"1731060.07189941"	"HCD"	"MS2"	"7.382407"	"22.2"	"100.000"	"91.9584"	"32312"	"32312"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"22.4"	""	"29.2"	""	"39.7"	""	"44.8"	"41.3"	""	"1122"	"57"	"37.000"	"30.000"	"0.000123584174577299"	"22"	"0"	"2.013E-06"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVYVNDAFGTAHR"	"[K].lGDVYVNDAFGTAHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"621.98956"	"1863.95414"	"1863.95508"	"-0.50"	"-0.00031"	"15/146"	"15"	"146"	"6605090.96057129"	"HCD"	"MS2"	"6.684679"	"44.1"	"100.000"	"92.1880"	"32440"	"32440"	"32425"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"61.1"	""	"55.7"	""	"67.0"	""	"78.7"	"83.1"	""	"1122"	"65"	"37.000"	"30.000"	"1.63667655485466E-05"	"27"	"0"	"2.553E-08"	"1.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVYVNDAFGTAHR"	"[K].lGDVYVNDAFGTAHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"621.98999"	"1863.95542"	"1863.95508"	"0.18"	"0.00011"	"17/146"	"17"	"146"	"5914808.54125977"	"HCD"	"MS2"	"1.393754"	"41.4"	"100.000"	"92.2695"	"32438"	"32438"	"32422"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.2"	""	"50.8"	""	"56.1"	""	"64.2"	""	"76.9"	"77.9"	""	"1132"	"56"	"37.000"	"30.000"	"0.000145484401304718"	"22"	"0"	"2.636E-07"	"1.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVYVNDAFGTAHR"	"[K].lGDVYVNDAFGTAHR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"621.99017"	"1863.95597"	"1863.95508"	"0.48"	"0.00030"	"16/146"	"16"	"146"	"2511646.12615967"	"HCD"	"MS2"	"21.19821"	"23.1"	"100.000"	"91.8885"	"32319"	"32319"	"32296"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.9"	""	"32.5"	""	"35.4"	""	"38.6"	""	"44.8"	"33.0"	""	"1123"	"58"	"37.000"	"30.000"	"8.91968999337653E-05"	"18"	"0"	"7.645E-07"	"1.089"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGDVYVNDAFGTAHR"	"[K].lGDVYVnDAFGTAHR.[A]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"P16617"	"Phosphoglycerate kinase 1 OS=Rattus norvegicus OX=10116 GN=Pgk1 PE=1 SV=2"	"0"	"3"	"3"	"0.1538"	"0.0000"	"1"	"1"	"1"	"622.31763"	"1864.93833"	"1864.93909"	"-0.41"	"-0.00026"	"13/146"	"13"	"146"	"1058434.61187744"	"HCD"	"MS2"	"32.02562"	"21.7"	"100.000"	"96.7289"	"34271"	"34271"	"34247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.7"	""	"24.3"	""	"32.7"	""	"36.0"	"0.8"	"39.9"	"35.8"	""	"969"	"13"	"36.000"	"29.000"	"2.65640189504154"	"25"	"9.9E-05"	"0.001015"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDLEATSEHFK"	"[K].tEDLEATSEHFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"622.32715"	"1864.96689"	"1864.96928"	"-1.28"	"-0.00080"	"13/104"	"13"	"104"	"716581.467712402"	"HCD"	"MS2"	"40.31499"	"32.0"	"100.000"	"65.9067"	"21813"	"21813"	"21784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.2"	""	"34.4"	""	"26.5"	""	"56.9"	""	"79.8"	"76.7"	""	"1096"	"34"	"37.000"	"30.000"	"0.0198509163132351"	"21"	"0"	"2.612E-06"	"0.98"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TEDLEATSEHFK"	"[K].tEDLEATSEHFk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"Q9WUF4"	"Vesicle-associated membrane protein 8 OS=Rattus norvegicus OX=10116 GN=Vamp8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.32776"	"1864.96872"	"1864.96928"	"-0.30"	"-0.00019"	"13/104"	"13"	"104"	"466433.639038086"	"HCD"	"MS2"	"20.76654"	"25.1"	"100.000"	"65.9124"	"21782"	"21782"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.1"	""	"23.4"	""	"26.2"	""	"57.2"	"1.0"	"56.0"	"50.3"	""	"1096"	"22"	"37.000"	"30.000"	"0.325672102921334"	"14"	"0"	"0.0002392"	"0.576"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLYTAK"	"[R].gNPTVEVDLYTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.02411"	"1865.04094"	"1865.04205"	"-0.59"	"-0.00055"	"5/132"	"5"	"132"	"68249.529296875"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"97.0519"	"34371"	"34371"	"34349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.2"	""	"5.9"	""	"7.9"	""	"7.5"	""	"6.6"	"6.0"	""	"1052"	"18"	"37.000"	"30.000"	"0.849152600890732"	"14"	"0.003317"	"0.03671"	"0.123"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLYTAK"	"[R].gNPTVEVDLYTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.35205"	"1865.04160"	"1865.04205"	"-0.24"	"-0.00015"	"14/132"	"14"	"132"	"2247021.24273682"	"HCD"	"MS2"	"12.4326"	"49.1"	"100.000"	"96.8906"	"34336"	"34336"	"34326"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.3"	""	"73.0"	""	"65.0"	""	"82.0"	""	"84.6"	"90.6"	""	"1057"	"44"	"37.000"	"30.000"	"0.0022082334877274"	"15"	"0"	"5.81E-07"	"1.114"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLYTAK"	"[R].gNPTVEVDLYTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.02460"	"1865.04192"	"1865.04205"	"-0.07"	"-0.00007"	"12/132"	"12"	"132"	"138728.142211914"	"HCD"	"MS2"	"0"	"12.0"	"100.000"	"96.7402"	"34245"	"34245"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"16.7"	""	"19.7"	""	"16.1"	""	"19.8"	"21.3"	""	"1058"	"48"	"37.000"	"30.000"	"0.000852031541009305"	"15"	"9.9E-05"	"0.0007069"	"0.479"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLYTAK"	"[R].gNPTVEVDLYTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"622.35229"	"1865.04233"	"1865.04205"	"0.15"	"0.00009"	"11/132"	"11"	"132"	"2155943.37817383"	"HCD"	"MS2"	"34.81953"	"42.7"	"100.000"	"96.7267"	"34239"	"34239"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"73.1"	""	"41.1"	""	"60.5"	""	"74.1"	"0.8"	"77.3"	"77.1"	""	"1052"	"44"	"37.000"	"30.000"	"0.0021329748964585"	"16"	"0"	"4.118E-06"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLYTAK"	"[R].gNPTVEVDLYTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"622.35242"	"1865.04270"	"1865.04205"	"0.35"	"0.00022"	"13/132"	"13"	"132"	"807641.318054199"	"HCD"	"MS2"	"13.65554"	"25.4"	"100.000"	"97.0358"	"34364"	"34364"	"34349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"42.4"	""	"31.6"	""	"33.5"	""	"36.1"	"0.2"	"45.3"	"51.1"	""	"1053"	"46"	"37.000"	"30.000"	"0.00146689279528358"	"15"	"0"	"1.983E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GNPTVEVDLYTAK"	"[R].gNPTVEVDLYTAk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.02509"	"1865.04289"	"1865.04205"	"0.45"	"0.00042"	"10/132"	"10"	"132"	"106195.807861328"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"96.8189"	"34308"	"34308"	"34279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"9.9"	""	"12.5"	""	"15.7"	""	"17.3"	"20.7"	""	"1052"	"31"	"37.000"	"30.000"	"0.042168266134192"	"14"	"0.0001991"	"0.003359"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASTDIAGLEESFRK"	"[M].aASTDIAGLEESFRk.[F]"	"N-Term(Prot)(Acetyl); K15(TMT6plex)"	"1"	"1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"Q5PPN5"	"Tubulin polymerization-promoting protein family member 3 OS=Rattus norvegicus OX=10116 GN=Tppp3 PE=2 SV=1"	"1"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"933.49323"	"1865.97917"	"1865.98062"	"-0.78"	"-0.00072"	"7/132"	"7"	"132"	"193329.614746094"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"110.8105"	"39836"	"39836"	"39815"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.2"	""	"17.5"	""	"17.0"	""	"15.1"	""	"14.0"	"13.2"	""	"1156"	"28"	"37.000"	"30.000"	"0.0850996626406111"	"14"	"0.005266"	"0.06706"	"0.067"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYDPTVPVSQK"	"[R].eFYDPTVPVSQk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"0"	"2"	"2"	"0.8519"	"0.0000"	"1"	"1"	"1"	"934.51196"	"1868.01665"	"1868.02059"	"-2.11"	"-0.00197"	"5/108"	"5"	"108"	"121697.875366211"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"95.8028"	"33898"	"33898"	"33878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.7"	""	"11.4"	""	"8.8"	""	"12.1"	""	"18.2"	"16.9"	""	"1150"	"27"	"37.000"	"30.000"	"0.10608838660282"	"18"	"0.0001991"	"0.005834"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYDPTVPVSQK"	"[R].eFYDPTVPVSQk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.34375"	"1868.01670"	"1868.02059"	"-2.08"	"-0.00130"	"11/108"	"11"	"108"	"1413119.90844727"	"HCD"	"MS2"	"12.31852"	"40.2"	"100.000"	"95.8237"	"33907"	"33907"	"33891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.7"	""	"37.9"	""	"44.6"	""	"67.9"	""	"94.2"	"91.9"	""	"1150"	"36"	"37.000"	"30.000"	"0.0152639819813594"	"15"	"0"	"0.0001531"	"0.616"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYDPTVPVSQK"	"[R].eFYDPTVPVSQk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.34393"	"1868.01725"	"1868.02059"	"-1.79"	"-0.00111"	"11/108"	"11"	"108"	"1317415.45904541"	"HCD"	"MS2"	"10.26401"	"40.0"	"100.000"	"95.8099"	"33868"	"33868"	"33850"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.9"	""	"45.9"	""	"38.2"	""	"71.8"	""	"102.3"	"91.3"	""	"1146"	"33"	"37.000"	"30.000"	"0.0302799129267178"	"15"	"9.9E-05"	"0.0006102"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYDPTVPVSQK"	"[R].eFYDPTVPVSQk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"934.51337"	"1868.01946"	"1868.02059"	"-0.60"	"-0.00056"	"8/108"	"8"	"108"	"98284.9407958984"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"95.9023"	"33906"	"33906"	"33881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.0"	""	"7.5"	""	"6.2"	""	"10.4"	""	"17.4"	"17.8"	""	"1122"	"17"	"37.000"	"30.000"	"1.18294039211258"	"17"	"0.000264"	"0.006093"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFYDPTVPVSQK"	"[R].eFYDPTVPVSQk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"Q9JKD6"	"Claudin-5 OS=Rattus norvegicus OX=10116 GN=Cldn5 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"623.34491"	"1868.02018"	"1868.02059"	"-0.22"	"-0.00014"	"7/108"	"7"	"108"	"416610.250549316"	"HCD"	"MS2"	"38.44182"	"14.5"	"100.000"	"96.1305"	"34031"	"34031"	"34006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.7"	""	"14.8"	""	"21.6"	""	"22.8"	""	"30.8"	"28.3"	""	"1114"	"5"	"37.000"	"30.000"	"15.8801717499968"	"13"	"0.002419"	"0.02265"	"0.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.66864"	"1868.99137"	"1868.99405"	"-1.44"	"-0.00090"	"14/124"	"14"	"124"	"6258012.15148926"	"HCD"	"MS2"	"0"	"163.7"	"100.000"	"66.3009"	"21940"	"21940"	"21925"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"335.9"	""	"220.0"	""	"215.9"	""	"175.4"	""	"293.3"	"309.5"	""	"1164"	"27"	"37.000"	"30.000"	"0.115857188329054"	"14"	"0"	"9.011E-05"	"0.663"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.66870"	"1868.99155"	"1868.99405"	"-1.34"	"-0.00083"	"12/124"	"12"	"124"	"1312125.24017334"	"HCD"	"MS2"	"0"	"45.6"	"100.000"	"66.6448"	"22076"	"22076"	"22063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.0"	""	"58.6"	""	"59.4"	""	"51.5"	""	"91.2"	"96.8"	""	"1166"	"27"	"37.000"	"30.000"	"0.110832863719528"	"14"	"0"	"0.0002433"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.66895"	"1868.99228"	"1868.99405"	"-0.95"	"-0.00059"	"13/124"	"13"	"124"	"5847145.2265625"	"HCD"	"MS2"	"0"	"151.6"	"100.000"	"66.3868"	"22007"	"22007"	"21998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"322.3"	""	"198.0"	""	"209.3"	""	"155.0"	""	"262.0"	"291.2"	""	"1162"	"29"	"37.000"	"30.000"	"0.0685766289313655"	"14"	"0"	"2.441E-05"	"0.78"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"623.66925"	"1868.99320"	"1868.99405"	"-0.46"	"-0.00029"	"14/124"	"14"	"124"	"1644800.36157227"	"HCD"	"MS2"	"23.81584"	"55.2"	"100.000"	"66.0231"	"21827"	"21827"	"21801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"112.6"	""	"70.2"	""	"68.0"	""	"66.9"	"0.4"	"103.3"	"101.4"	""	"1172"	"43"	"37.000"	"30.000"	"0.00322773310093566"	"21"	"0"	"1.282E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.66943"	"1868.99375"	"1868.99405"	"-0.16"	"-0.00010"	"12/124"	"12"	"124"	"1750571.37335205"	"HCD"	"MS2"	"5.832585"	"58.9"	"100.000"	"66.6850"	"22125"	"22125"	"22114"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"108.5"	""	"73.5"	""	"82.7"	""	"66.8"	""	"108.3"	"121.8"	""	"1165"	"27"	"37.000"	"30.000"	"0.104784230806252"	"14"	"0"	"0.0003198"	"0.55"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDMk.[H]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.66962"	"1868.99430"	"1868.99405"	"0.13"	"0.00008"	"12/124"	"12"	"124"	"1989740.52349854"	"HCD"	"MS2"	"20.64207"	"70.0"	"100.000"	"66.1232"	"21901"	"21901"	"21878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"132.8"	""	"90.7"	""	"86.1"	""	"79.2"	"0.3"	"128.9"	"145.1"	""	"1162"	"25"	"37.000"	"30.000"	"0.170284897549044"	"14"	"0"	"0.0001048"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSTEEVLVAANK"	"[K].ySSTEEVLVAANk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"623.68390"	"1869.03714"	"1869.03696"	"0.10"	"0.00006"	"13/106"	"13"	"106"	"670491.568359375"	"HCD"	"MS2"	"25.17952"	"27.2"	"100.000"	"91.5708"	"32154"	"32154"	"32132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"28.5"	""	"30.0"	""	"52.2"	""	"61.3"	"62.3"	""	"1002"	"25"	"36.000"	"30.000"	"0.176537806392286"	"19"	"0"	"0.0003831"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSSTEEVLVAANK"	"[K].ySSTEEVLVAANk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"623.68396"	"1869.03733"	"1869.03696"	"0.19"	"0.00012"	"14/106"	"14"	"106"	"726090.179016113"	"HCD"	"MS2"	"24.59522"	"25.7"	"100.000"	"91.5008"	"32162"	"32162"	"32138"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"30.6"	""	"29.3"	""	"45.3"	""	"56.2"	"55.7"	""	"1010"	"28"	"37.000"	"30.000"	"0.0750397499354938"	"20"	"0"	"2.496E-05"	"0.778"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPMYPVVPVHLDR"	"[R].dSPmYPVVPVHLDR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P70709"	"Eosinophil cationic protein OS=Rattus norvegicus OX=10116 GN=Rnase3 PE=2 SV=1"	"P70709"	"Eosinophil cationic protein OS=Rattus norvegicus OX=10116 GN=Rnase3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"623.99701"	"1869.97647"	"1869.97304"	"1.84"	"0.00115"	"10/128"	"10"	"128"	"667642.249450684"	"HCD"	"MS2"	"28.21578"	"19.7"	"100.000"	"81.2648"	"28035"	"28035"	"28007"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"29.1"	""	"26.9"	""	"28.9"	""	"43.7"	"39.3"	""	"1110"	"15"	"37.000"	"30.000"	"1.92882569600979"	"13"	"0.0001991"	"0.002608"	"0.362"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPMYPVVPVHLDR"	"[R].dSPmYPVVPVHLDR.[I]"	"N-Term(TMT6plex); M4(Oxidation)"	"1"	"1"	"P70709"	"Eosinophil cationic protein OS=Rattus norvegicus OX=10116 GN=Rnase3 PE=2 SV=1"	"P70709"	"Eosinophil cationic protein OS=Rattus norvegicus OX=10116 GN=Rnase3 PE=2 SV=1"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"623.99731"	"1869.97739"	"1869.97304"	"2.33"	"0.00145"	"9/128"	"9"	"128"	"671823.430908203"	"HCD"	"MS2"	"23.51678"	"20.9"	"100.000"	"81.1889"	"27977"	"27977"	"27952"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"26.3"	""	"25.3"	""	"36.4"	""	"47.1"	"40.7"	""	"1124"	"16"	"37.000"	"30.000"	"1.51264255980693"	"14"	"0"	"0.0003423"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EDKYEEEIK"	"[K].eDkYEEEIk.[LIV]"	"N-Term(TMT6plex); K3(TMT6plex); K9(TMT6plex)"	"4"	"4"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3;Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2;Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1;Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"P09495; Q63610; P58775; P04692"	"Tropomyosin alpha-4 chain OS=Rattus norvegicus OX=10116 GN=Tpm4 PE=1 SV=3; Tropomyosin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tpm3 PE=1 SV=2; Tropomyosin beta chain OS=Rattus norvegicus OX=10116 GN=Tpm2 PE=1 SV=1; Tropomyosin alpha-1 chain OS=Rattus norvegicus OX=10116 GN=Tpm1 PE=1 SV=3"	"1"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"624.01868"	"1870.04148"	"1870.04127"	"0.11"	"0.00007"	"6/88"	"6"	"88"	"4091686.97747803"	"HCD"	"MS2"	"39.261"	"253.2"	"100.000"	"54.7373"	"17246"	"17246"	"17231"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"302.3"	""	"223.3"	""	"247.3"	""	"441.0"	""	"575.3"	"621.8"	""	"973"	"0"	"36.000"	"29.000"	"48.5381081049672"	"13"	"0.001316"	"0.01035"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALNEANLSNLK"	"[K].ePALNEANLSNLk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"624.35864"	"1871.06137"	"1871.06385"	"-1.32"	"-0.00082"	"12/130"	"12"	"130"	"697233.204223633"	"HCD"	"MS2"	"11.53555"	"20.3"	"100.000"	"98.1622"	"34820"	"34820"	"34801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.0"	""	"25.5"	""	"15.2"	""	"47.6"	""	"45.8"	"38.2"	""	"901"	"48"	"36.000"	"29.000"	"0.000756301210164213"	"21"	"0"	"8.656E-06"	"0.872"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALNEANLSNLK"	"[K].ePALNEANLSNLk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"624.35938"	"1871.06357"	"1871.06385"	"-0.15"	"-0.00009"	"13/130"	"13"	"130"	"1217230.91888428"	"HCD"	"MS2"	"10.71918"	"30.9"	"100.000"	"98.2734"	"34895"	"34895"	"34875"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.6"	""	"30.4"	""	"32.9"	""	"64.0"	""	"66.3"	"66.9"	""	"894"	"60"	"36.000"	"29.000"	"4.17164672456255E-05"	""	"0"	"9.384E-07"	"1.071"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPALNEANLSNLK"	"[K].ePALNEANLSNLk.[A]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"Q63797"	"Proteasome activator complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Psme1 PE=2 SV=1"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"624.35968"	"1871.06449"	"1871.06385"	"0.34"	"0.00021"	"12/130"	"12"	"130"	"491843.494384766"	"HCD"	"MS2"	"27.0763"	"17.7"	"100.000"	"98.5128"	"34962"	"34962"	"34943"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"21.7"	""	"29.7"	""	"26.5"	""	"31.6"	"32.8"	""	"893"	"28"	"36.000"	"29.000"	"0.0788535886936372"	"16"	"9.9E-05"	"0.0006777"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DFAVSTVPVSGASHLR"	"[R].dFAVSTVPVSGASHLR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"Q6MG60"	"N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 OS=Rattus norvegicus OX=10116 GN=Ddah2 PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"624.67743"	"1872.01773"	"1872.01768"	"0.03"	"0.00002"	"13/144"	"13"	"144"	"882281.19317627"	"HCD"	"MS2"	"17.73433"	"21.8"	"100.000"	"77.8817"	"26659"	"26659"	"26641"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"27.4"	""	"26.0"	""	"47.7"	""	"34.2"	"44.4"	""	"1134"	"37"	"37.000"	"30.000"	"0.0102939738079237"	"18"	"0"	"1.987E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQIEEPAISQAK"	"[K].lSQIEEPAISQAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"624.69928"	"1872.08329"	"1872.08425"	"-0.51"	"-0.00032"	"13/132"	"13"	"132"	"410619.339294434"	"HCD"	"MS2"	"25.26097"	"14.4"	"100.000"	"93.5584"	"32990"	"32990"	"32968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"13.9"	""	"15.0"	""	"31.6"	""	"28.9"	"30.8"	""	"843"	"42"	"36.000"	"29.000"	"0.00248197600732381"	"22"	"0"	"2.231E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LSQIEEPAISQAK"	"[K].lSQIEEPAISQAk.[K]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"P24587"	"A-kinase anchor protein 5 OS=Rattus norvegicus OX=10116 GN=Akap5 PE=1 SV=2"	"0"	"3"	"3"	"0.8689"	"0.0000"	"1"	"1"	"1"	"624.70056"	"1872.08713"	"1872.08425"	"1.54"	"0.00096"	"13/132"	"13"	"132"	"538560.917480469"	"HCD"	"MS2"	"15.35841"	"20.0"	"100.000"	"93.5312"	"32943"	"32943"	"32923"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"18.7"	""	"15.0"	""	"50.2"	""	"53.6"	"40.3"	""	"822"	"61"	"36.000"	"29.000"	"2.9569352995952E-05"	"24"	"0"	"5.354E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAAIDALNDGELQK"	"[K].gAAIDALNDGELQk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"P50503"	"Hsc70-interacting protein OS=Rattus norvegicus OX=10116 GN=St13 PE=1 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"625.01898"	"1873.04239"	"1873.04311"	"-0.38"	"-0.00024"	"11/128"	"11"	"128"	"396350.181335449"	"HCD"	"MS2"	"43.69929"	"14.0"	"100.000"	"95.0739"	"33603"	"33603"	"33576"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"16.9"	""	"20.6"	""	"21.9"	""	"26.8"	"25.8"	""	"1068"	"34"	"37.000"	"30.000"	"0.0216043526166434"	"25"	"0"	"9.12E-06"	"0.868"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEPVFNDELPAR"	"[R].kEPVFNDELPAR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"1"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"625.02411"	"1873.05777"	"1873.05837"	"-0.32"	"-0.00020"	"10/122"	"10"	"122"	"3535967.43444824"	"HCD"	"MS2"	"8.105358"	"128.7"	"100.000"	"67.7065"	"22538"	"22538"	"22525"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"168.1"	""	"177.6"	""	"198.0"	""	"192.6"	"0.1"	"250.2"	"232.9"	""	"968"	"43"	"36.000"	"29.000"	"0.00238147135269822"	"20"	"0"	"1.133E-06"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEPVFNDELPAR"	"[R].kEPVFNDELPAR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"1"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"625.02429"	"1873.05832"	"1873.05837"	"-0.02"	"-0.00002"	"10/122"	"10"	"122"	"2860278.52435303"	"HCD"	"MS2"	"5.807097"	"110.9"	"100.000"	"67.6572"	"22487"	"22487"	"22469"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"147.1"	""	"153.2"	""	"151.5"	""	"168.0"	"2.6"	"225.4"	"204.4"	""	"995"	"38"	"36.000"	"29.000"	"0.00786670899537017"	"19"	"0"	"1.774E-06"	"1.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEPVFNDELPAR"	"[R].kEPVFNDELPAR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"1"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"625.02466"	"1873.05942"	"1873.05837"	"0.56"	"0.00035"	"10/122"	"10"	"122"	"2304926.26873779"	"HCD"	"MS2"	"7.351898"	"86.2"	"100.000"	"67.4142"	"22420"	"22420"	"22400"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.0"	""	"128.3"	""	"128.5"	""	"146.2"	""	"146.2"	"156.8"	""	"982"	"35"	"36.000"	"29.000"	"0.0144571102219519"	"19"	"0"	"6.834E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KEPVFNDELPAR"	"[R].kEPVFNDELPAR.[I]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"Q9EQ76"	"Dimethylaniline monooxygenase [N-oxide-forming] 3 OS=Rattus norvegicus OX=10116 GN=Fmo3 PE=1 SV=1"	"1"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"625.02496"	"1873.06034"	"1873.05837"	"1.05"	"0.00066"	"10/122"	"10"	"122"	"2819489.07275391"	"HCD"	"MS2"	"17.79782"	"107.1"	"100.000"	"67.3530"	"22364"	"22364"	"22343"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"137.0"	""	"145.7"	""	"156.0"	""	"184.0"	""	"195.7"	"196.5"	""	"953"	"42"	"36.000"	"29.000"	"0.00297894788107614"	"19"	"0"	"1.894E-06"	"1.008"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNTSEVYFDGVK"	"[K].aSNTSEVYFDGVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.7708"	"0.0000"	"1"	"1"	"1"	"625.66772"	"1874.98862"	"1874.99001"	"-0.74"	"-0.00046"	"13/132"	"13"	"132"	"525151.511169434"	"HCD"	"MS2"	"11.02239"	"18.0"	"100.000"	"83.2709"	"28817"	"28817"	"28791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.7"	""	"21.7"	""	"24.3"	""	"24.4"	"1.1"	"30.7"	"30.1"	""	"1217"	"48"	"37.000"	"30.000"	"0.00100060019357629"	"26"	"0"	"7.388E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNTSEVYFDGVK"	"[K].aSNTSEVYFDGVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"625.66791"	"1874.98917"	"1874.99001"	"-0.45"	"-0.00028"	"12/132"	"12"	"132"	"407511.287963867"	"HCD"	"MS2"	"9.550586"	"15.5"	"100.000"	"83.6415"	"28995"	"28995"	"28980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.6"	""	"18.5"	""	"24.0"	""	"25.8"	""	"30.7"	"27.7"	""	"1224"	"35"	"37.000"	"30.000"	"0.0195772380713113"	"25"	"0"	"0.0002539"	"0.571"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNTSEVYFDGVK"	"[K].aSNTSEVYFDGVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"625.66803"	"1874.98954"	"1874.99001"	"-0.26"	"-0.00016"	"11/132"	"11"	"132"	"485829.687683105"	"HCD"	"MS2"	"8.510893"	"17.7"	"100.000"	"83.5640"	"28935"	"28935"	"28921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.1"	""	"23.5"	""	"24.5"	""	"26.4"	""	"34.8"	"31.6"	""	"1224"	"38"	"37.000"	"30.000"	"0.00926299484042958"	"25"	"0"	"1.865E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNTSEVYFDGVK"	"[K].aSNTSEVYFDGVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"625.66821"	"1874.99009"	"1874.99001"	"0.04"	"0.00002"	"13/132"	"13"	"132"	"611499.859680176"	"HCD"	"MS2"	"6.324312"	"19.0"	"100.000"	"83.3371"	"28872"	"28872"	"28848"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.4"	""	"22.9"	""	"24.0"	""	"29.8"	""	"32.1"	"34.7"	""	"1256"	"43"	"37.000"	"30.000"	"0.00326557485823048"	"26"	"0"	"7.07E-06"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASNTSEVYFDGVK"	"[K].aSNTSEVYFDGVk.[V]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"P45953"	"Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Acadvl PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"938.00031"	"1874.99333"	"1874.99001"	"1.77"	"0.00166"	"5/132"	"5"	"132"	"76351.587097168"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"83.3032"	"28830"	"28830"	"28805"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"7.7"	""	"8.5"	""	"9.4"	""	"9.8"	"11.1"	""	"1261"	"7"	"37.000"	"31.000"	"11.6328222179266"	"13"	"0.008522"	"0.1085"	"0.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYSMGDAPDYDR"	"[K].kYSMGDAPDYDR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.98108"	"1875.92868"	"1875.93112"	"-1.30"	"-0.00081"	"9/126"	"9"	"126"	"1207458.64013672"	"HCD"	"MS2"	"24.78547"	"71.6"	"100.000"	"49.1750"	"15018"	"15018"	"14999"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"114.1"	""	"87.9"	""	"91.0"	""	"109.7"	""	"137.9"	"138.3"	""	"912"	"13"	"36.000"	"29.000"	"2.55837877070806"	"13"	"9.9E-05"	"0.0008185"	"0.466"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KYSMGDAPDYDR"	"[K].kYSMGDAPDYDR.[S]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"P08010"	"Glutathione S-transferase Mu 2 OS=Rattus norvegicus OX=10116 GN=Gstm2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.98187"	"1875.93106"	"1875.93112"	"-0.03"	"-0.00002"	"10/126"	"10"	"126"	"1628658.52038574"	"HCD"	"MS2"	"19.58511"	"90.7"	"100.000"	"49.4480"	"15094"	"15094"	"15076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"177.2"	""	"99.7"	""	"112.8"	""	"114.2"	"0.2"	"182.7"	"172.5"	""	"970"	"19"	"36.000"	"29.000"	"0.576423580306953"	"14"	"0"	"0.0001016"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSIGTENTEENRR"	"[R].lQSIGTENTEENRR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"625.99481"	"1875.96988"	"1875.97218"	"-1.23"	"-0.00077"	"13/144"	"13"	"144"	"1515149.63818359"	"HCD"	"MS2"	"0"	"68.7"	"100.000"	"36.1472"	"9738"	"9738"	"9719"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"120.0"	""	"96.1"	""	"83.5"	""	"107.6"	""	"119.2"	"128.3"	""	"1155"	"16"	"37.000"	"30.000"	"1.43400936830819"	"14"	"0"	"0.0001004"	"0.653"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LQSIGTENTEENRR"	"[R].lQSIGTENTEENRR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"1"	"3"	"3"	"0.8710"	"0.0000"	"1"	"1"	"1"	"625.99512"	"1875.97080"	"1875.97218"	"-0.74"	"-0.00046"	"7/144"	"7"	"144"	"1693012.79003906"	"HCD"	"MS2"	"0"	"66.9"	"100.000"	"36.2821"	"9755"	"9755"	"9735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"130.0"	""	"73.4"	""	"85.4"	""	"103.3"	"0.9"	"110.3"	"129.9"	""	"1152"	"31"	"37.000"	"30.000"	"0.0475797858956455"	"18"	"0"	"3.866E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVTITNDGATILK"	"[K].gDVTITNDGATILk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"626.03162"	"1876.08030"	"1876.07916"	"0.60"	"0.00038"	"12/136"	"12"	"136"	"341052.529541016"	"HCD"	"MS2"	"0"	"14.0"	"100.000"	"97.1418"	"34408"	"34408"	"34377"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.5"	""	"12.9"	""	"19.9"	""	"22.3"	""	"30.1"	"31.5"	""	"1001"	"56"	"36.000"	"30.000"	"0.00013073867578768"	"22"	"0"	"3.6E-06"	"0.951"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDVTITNDGATILK"	"[K].gDVTITNDGATILk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"Q7TPB1"	"T-complex protein 1 subunit delta OS=Rattus norvegicus OX=10116 GN=Cct4 PE=1 SV=3"	"0"	"3"	"3"	"0.8085"	"0.0000"	"1"	"1"	"1"	"626.03198"	"1876.08139"	"1876.07916"	"1.19"	"0.00074"	"11/136"	"11"	"136"	"328885.435241699"	"HCD"	"MS2"	"7.996484"	"13.0"	"100.000"	"97.2206"	"34470"	"34470"	"34445"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"16.7"	""	"16.0"	""	"19.4"	""	"26.8"	"28.5"	""	"999"	"47"	"36.000"	"29.000"	"0.00102928464167836"	"25"	"0"	"1.55E-06"	"1.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"626.31866"	"1876.94144"	"1876.94246"	"-0.54"	"-0.00034"	"17/134"	"17"	"134"	"3976061.22271729"	"HCD"	"MS2"	"5.383677"	"29.7"	"100.000"	"68.3413"	"22765"	"22765"	"22748"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.7"	"2.1"	"34.5"	""	"36.2"	""	"57.9"	""	"60.3"	"57.7"	""	"972"	"90"	"36.000"	"29.000"	"4.82654399532574E-08"	"24"	"0"	"1.104E-08"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"626.31873"	"1876.94162"	"1876.94246"	"-0.45"	"-0.00028"	"10/134"	"10"	"134"	"3227910.74090576"	"HCD"	"MS2"	"6.48957"	"31.3"	"100.000"	"68.4966"	"22860"	"22860"	"22842"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.3"	"2.5"	"44.7"	""	"39.0"	""	"54.6"	"1.6"	"51.0"	"60.8"	""	"976"	"80"	"36.000"	"29.000"	"5.21698781060657E-07"	"22"	"0"	"1.461E-08"	"1.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9518"	"0.0000"	"1"	"1"	"1"	"626.31897"	"1876.94236"	"1876.94246"	"-0.06"	"-0.00004"	"10/134"	"10"	"134"	"4575820.84002686"	"HCD"	"MS2"	"10.20746"	"35.2"	"100.000"	"67.8539"	"22598"	"22598"	"22579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.0"	""	"38.9"	""	"52.9"	""	"62.9"	"3.3"	"55.3"	"67.6"	""	"982"	"83"	"36.000"	"29.000"	"2.6551037256628E-07"	"22"	"0"	"3.874E-08"	"1.356"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9390"	"0.0000"	"1"	"1"	"1"	"626.31915"	"1876.94291"	"1876.94246"	"0.24"	"0.00015"	"10/134"	"10"	"134"	"5133527.03515625"	"HCD"	"MS2"	"8.936687"	"38.3"	"100.000"	"67.7651"	"22531"	"22531"	"22513"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.9"	""	"47.9"	""	"45.4"	""	"75.1"	"3.0"	"72.1"	"66.2"	""	"985"	"82"	"36.000"	"29.000"	"2.85368632990238E-07"	"23"	"0"	"6.718E-09"	"1.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9804"	"0.0000"	"1"	"1"	"1"	"626.31946"	"1876.94382"	"1876.94246"	"0.72"	"0.00045"	"11/134"	"11"	"134"	"30501400.2775879"	"HCD"	"MS2"	"3.324522"	"50.7"	"38.396"	"68.0440"	"22644"	"22644"	"22628"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.6"	"4.5"	"58.1"	""	"66.3"	""	"91.4"	"1.5"	"88.1"	"91.8"	""	"996"	"102"	"36.000"	"29.000"	"3.23764585790859E-09"	"21"	"0"	"4.863E-10"	"1.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQMSHFR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9894"	"0.0000"	"1"	"1"	"1"	"626.31976"	"1876.94474"	"1876.94246"	"1.21"	"0.00076"	"12/134"	"12"	"134"	"22790323.4416504"	"HCD"	"MS2"	"3.618887"	"40.0"	"42.908"	"68.1788"	"22731"	"22731"	"22714"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	"3.2"	"41.2"	""	"56.5"	""	"73.9"	""	"71.4"	"72.3"	""	"996"	"94"	"36.000"	"29.000"	"1.82485912174621E-08"	"19"	"0"	"9.159E-09"	"1.485"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLQTMTALGIDTAR"	"[R].qGGLQTmTALGIDTAR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"626.66937"	"1877.99356"	"1877.99523"	"-0.89"	"-0.00055"	"15/166"	"15"	"166"	"450800.052185059"	"HCD"	"MS2"	"37.14116"	"14.3"	"100.000"	"71.2826"	"23991"	"23991"	"23964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"19.1"	""	"19.6"	""	"28.8"	""	"29.5"	"29.2"	""	"1255"	"50"	"37.000"	"30.000"	"0.000633306186013119"	"18"	"0"	"1.468E-06"	"1.031"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLQTMTALGIDTAR"	"[R].qGGLQTmTALGIDTAR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.66943"	"1877.99375"	"1877.99523"	"-0.79"	"-0.00049"	"16/166"	"16"	"166"	"421453.138000488"	"HCD"	"MS2"	"35.43313"	"14.0"	"100.000"	"71.1678"	"23913"	"23913"	"23886"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.3"	""	"19.6"	""	"17.6"	""	"27.4"	""	"25.0"	"32.2"	""	"1255"	"48"	"37.000"	"30.000"	"0.00093672849201082"	"16"	"0"	"6.607E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.66986"	"1877.99503"	"1877.99588"	"-0.45"	"-0.00028"	"9/118"	"9"	"118"	"245464.923828125"	"HCD"	"MS2"	"0"	"10.9"	"100.000"	"83.1926"	"28785"	"28785"	"28763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"11.9"	""	"8.8"	""	"23.7"	""	"25.2"	"21.5"	""	"1269"	"24"	"38.000"	"31.000"	"0.253181300548779"	"14"	"0.0001686"	"0.001305"	"0.424"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"626.66992"	"1877.99521"	"1877.99588"	"-0.35"	"-0.00022"	"11/118"	"11"	"118"	"10073015.5031738"	"HCD"	"MS2"	"2.054254"	"90.7"	"100.000"	"82.1555"	"28369"	"28369"	"28352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"57.9"	""	"56.6"	""	"192.0"	""	"267.7"	"237.5"	""	"1265"	"81"	"38.000"	"31.000"	"5.2609058522244E-07"	"20"	"0"	"7.938E-09"	"1.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QGGLQTMTALGIDTAR"	"[R].qGGLQTmTALGIDTAR.[K]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"P18614"	"Integrin alpha-1 OS=Rattus norvegicus OX=10116 GN=Itga1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.66998"	"1877.99540"	"1877.99523"	"0.09"	"0.00006"	"13/166"	"13"	"166"	"236179.307983398"	"HCD"	"MS2"	"15.02804"	"12.9"	"100.000"	"71.5980"	"24119"	"24119"	"24094"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"16.7"	""	"16.8"	""	"22.0"	""	"26.2"	"25.8"	""	"1264"	"34"	"38.000"	"31.000"	"0.0236437891787937"	"15"	"0"	"0.0001309"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"626.66998"	"1877.99540"	"1877.99588"	"-0.26"	"-0.00016"	"15/118"	"15"	"118"	"1234751.94940186"	"HCD"	"MS2"	"0"	"19.4"	"100.000"	"82.8568"	"28677"	"28677"	"28662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.9"	""	"18.0"	""	"15.1"	""	"38.3"	"0.4"	"50.9"	"44.8"	""	"1264"	"46"	"38.000"	"31.000"	"0.00177712132481213"	"23"	"0"	"4.255E-07"	"1.142"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.66998"	"1877.99540"	"1877.99588"	"-0.26"	"-0.00016"	"16/118"	"16"	"118"	"1767885.65222168"	"HCD"	"MS2"	"1.181036"	"23.4"	"100.000"	"82.5507"	"28554"	"28554"	"28537"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.2"	""	"20.9"	""	"19.4"	""	"44.9"	""	"56.3"	"66.9"	""	"1264"	"38"	"38.000"	"31.000"	"0.0099475717034265"	"15"	"0"	"6.177E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.66998"	"1877.99540"	"1877.99588"	"-0.26"	"-0.00016"	"15/118"	"15"	"118"	"2457197.6774292"	"HCD"	"MS2"	"1.903622"	"32.0"	"100.000"	"81.9427"	"28310"	"28310"	"28291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.4"	""	"36.8"	""	"21.6"	""	"63.2"	""	"82.7"	"75.5"	""	"1264"	"23"	"38.000"	"31.000"	"0.28755245401483"	"14"	"0"	"5.404E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.8939"	"0.0000"	"1"	"1"	"1"	"626.67010"	"1877.99576"	"1877.99588"	"-0.06"	"-0.00004"	"9/118"	"9"	"118"	"2033514.09942627"	"HCD"	"MS2"	"4.692895"	"24.5"	"100.000"	"82.4705"	"28493"	"28493"	"28476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.0"	""	"21.7"	""	"17.6"	""	"54.5"	"0.4"	"60.5"	"60.0"	""	"1289"	"66"	"38.000"	"31.000"	"1.50738060031595E-05"	"23"	"0"	"2.511E-07"	"1.189"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"0.9740"	"0.0000"	"1"	"1"	"1"	"626.67017"	"1877.99594"	"1877.99588"	"0.04"	"0.00002"	"11/118"	"11"	"118"	"1855497.76080322"	"HCD"	"MS2"	"16.38677"	"23.2"	"100.000"	"81.8393"	"28240"	"28240"	"28215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"19.2"	""	"16.7"	""	"47.6"	"1.8"	"59.1"	"58.4"	""	"1289"	"77"	"38.000"	"31.000"	"1.18364896228801E-06"	"19"	"0"	"2.506E-08"	"1.395"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.67029"	"1877.99631"	"1877.99588"	"0.23"	"0.00014"	"15/118"	"15"	"118"	"1239352.02716064"	"HCD"	"MS2"	"7.860328"	"20.8"	"100.000"	"82.8156"	"28632"	"28632"	"28615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.4"	""	"22.4"	""	"22.1"	""	"32.5"	""	"48.3"	"52.4"	""	"1286"	"33"	"38.000"	"31.000"	"0.0301447004719406"	"15"	"0"	"1.404E-05"	"0.829"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YVDSEGHLYTVPIR"	"[K].yVDSEGHLYTVPIR.[E]"	"N-Term(TMT6plex)"	"1"	"1"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"P41350"	"Caveolin-1 OS=Rattus norvegicus OX=10116 GN=Cav1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"626.67053"	"1877.99704"	"1877.99588"	"0.62"	"0.00039"	"11/118"	"11"	"118"	"8687554.73236084"	"HCD"	"MS2"	"0.5524286"	"86.9"	"100.000"	"82.2337"	"28429"	"28429"	"28412"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.3"	""	"68.7"	""	"54.2"	""	"180.9"	""	"238.1"	"229.8"	""	"1282"	"44"	"38.000"	"31.000"	"0.00257547909754171"	"15"	"0"	"1.972E-06"	"1.005"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQVAMNPTNTVFDAK"	"[K].NQVAMNPTNTVFDAk.[R]"	"K15(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"939.98193"	"1878.95659"	"1878.95811"	"-0.81"	"-0.00076"	"5/150"	"5"	"150"	"57085.5477294922"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"82.8759"	"28685"	"28685"	"28662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.3"	""	""	""	""	""	""	""	"3.5"	"5.9"	""	"1087"	"3"	"37.000"	"30.000"	"27.8740162199307"	"13"	"0.004959"	"0.06144"	"0.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVSADPNVPNVIVTR"	"[R].vAVSADPNVPNVIVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.36475"	"1880.07969"	"1880.08028"	"-0.31"	"-0.00020"	"14/158"	"14"	"158"	"2020060.48248291"	"HCD"	"MS2"	"24.18384"	"35.2"	"100.000"	"99.1048"	"35230"	"35230"	"35217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.8"	""	"36.7"	""	"48.6"	""	"69.2"	""	"61.6"	"72.4"	""	"847"	"32"	"36.000"	"29.000"	"0.0245953730820276"	"15"	"0"	"4.686E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVSADPNVPNVIVTR"	"[R].vAVSADPNVPNVIVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.9048"	"0.0000"	"1"	"1"	"1"	"940.54370"	"1880.08013"	"1880.08028"	"-0.08"	"-0.00008"	"8/158"	"8"	"158"	"188791.650817871"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"98.9476"	"35167"	"35167"	"35146"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"8.4"	""	"9.6"	""	"10.5"	""	"11.9"	"11.6"	""	"840"	"42"	"36.000"	"29.000"	"0.00245046943794972"	"19"	"0"	"1.795E-05"	"0.807"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVSADPNVPNVIVTR"	"[R].vAVSADPNVPNVIVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.36493"	"1880.08023"	"1880.08028"	"-0.02"	"-0.00001"	"17/158"	"17"	"158"	"2422931.70275879"	"HCD"	"MS2"	"5.086322"	"29.2"	"100.000"	"99.0302"	"35171"	"35171"	"35160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.9"	""	"31.8"	""	"43.0"	""	"58.4"	"1.1"	"40.6"	"62.5"	""	"840"	"52"	"36.000"	"29.000"	"0.000253658424338079"	"16"	"0"	"9.971E-08"	"1.271"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVSADPNVPNVIVTR"	"[R].vAVSADPNVPNVIVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"940.54388"	"1880.08049"	"1880.08028"	"0.11"	"0.00011"	"4/158"	"4"	"158"	"75386.7044677734"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"99.1801"	"35231"	"35231"	"35210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.9"	""	"4.0"	""	"3.6"	""	"6.0"	""	"5.4"	"5.3"	""	"839"	"7"	"36.000"	"29.000"	"7.70427835034632"	"13"	"0.001348"	"0.01105"	"0.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAVSADPNVPNVIVTR"	"[R].vAVSADPNVPNVIVTR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"2"	"2"	"0.7059"	"0.0000"	"1"	"1"	"1"	"940.54407"	"1880.08086"	"1880.08028"	"0.31"	"0.00029"	"6/158"	"6"	"158"	"192503.278747559"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"98.8867"	"35113"	"35113"	"35090"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"10.2"	""	"7.2"	""	"14.0"	""	"6.7"	"14.5"	""	"833"	"34"	"36.000"	"29.000"	"0.0174026347708318"	"25"	"0"	"8.941E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFRDGEEAGAYDGPR"	"[K].iFRDGEEAGAYDGPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.98102"	"1881.92850"	"1881.92926"	"-0.40"	"-0.00025"	"18/152"	"18"	"152"	"627905.896179199"	"HCD"	"MS2"	"34.54638"	"30.9"	"100.000"	"58.9612"	"18994"	"18994"	"18970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.1"	""	"49.7"	""	"49.0"	""	"36.3"	""	"53.3"	"49.4"	""	"879"	"22"	"36.000"	"29.000"	"0.263608178014296"	"14"	"9.9E-05"	"0.0004214"	"0.525"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IFRDGEEAGAYDGPR"	"[K].iFRDGEEAGAYDGPR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"627.98206"	"1881.93161"	"1881.92926"	"1.25"	"0.00079"	"19/152"	"19"	"152"	"715526.893310547"	"HCD"	"MS2"	"23.68461"	"33.3"	"100.000"	"59.1870"	"19051"	"19051"	"19022"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.3"	""	"61.2"	""	"52.5"	""	"41.1"	""	"50.3"	"51.3"	""	"884"	"28"	"36.000"	"29.000"	"0.0640357159266785"	"14"	"0"	"5.625E-05"	"0.705"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEMmPLGVNk.[S]"	"N-Term(TMT6plex); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.1429"	"0.0000"	"1"	"1"	"1"	"628.33063"	"1882.97733"	"1882.98071"	"-1.80"	"-0.00113"	"10/102"	"10"	"102"	"951820.056152344"	"HCD"	"MS2"	"5.798525"	"32.2"	"100.000"	"99.8505"	"35531"	"35531"	"35511"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.9"	""	"59.9"	""	"58.5"	""	"40.1"	""	"44.7"	"49.1"	""	"1145"	"28"	"37.000"	"30.000"	"0.0978983767889189"	"16"	"9.9E-05"	"0.0004512"	"0.519"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GGEFEMMPLGVNK"	"[R].gGEFEMmPLGVNk.[S]"	"N-Term(TMT6plex); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"941.99280"	"1882.97832"	"1882.98071"	"-1.27"	"-0.00120"	"7/102"	"7"	"102"	"74193.1544799805"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"99.8141"	"35489"	"35489"	"35461"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"12.6"	""	"9.4"	""	"5.8"	""	"7.5"	"5.9"	""	"1146"	"8"	"37.000"	"30.000"	"8.43635063893947"	"13"	"0.008893"	"0.1138"	"0.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEMmPLGVNk.[S]"	"N-Term(TMT6plex); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.2121"	"0.0000"	"1"	"1"	"1"	"628.33136"	"1882.97953"	"1882.98071"	"-0.63"	"-0.00040"	"10/102"	"10"	"102"	"1072373.03747559"	"HCD"	"MS2"	"3.330673"	"36.4"	"100.000"	"99.7542"	"35464"	"35464"	"35445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.4"	""	"66.2"	""	"58.8"	""	"42.2"	""	"56.7"	"64.2"	""	"1150"	"33"	"37.000"	"30.000"	"0.0258028599211551"	"15"	"0"	"5.675E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"942.96301"	"1884.91875"	"1884.92106"	"-1.23"	"-0.00116"	"5/144"	"5"	"144"	"84440.8473510742"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"107.6974"	"38660"	"38660"	"38649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.2"	""	"2.2"	""	"2.6"	""	"6.8"	""	"5.5"	"2.5"	""	"778"	"12"	"35.000"	"28.000"	"2.69122247687466"	"13"	"0.0009352"	"0.008025"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"942.96405"	"1884.92082"	"1884.92106"	"-0.12"	"-0.00012"	"5/144"	"5"	"144"	"77917.7969970703"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"107.3547"	"38509"	"38509"	"38500"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.6"	""	"5.4"	""	"3.3"	""	"6.5"	""	"4.7"	"2.3"	""	"788"	"19"	"35.000"	"28.000"	"0.479177284254669"	"14"	"0.0001991"	"0.002439"	"0.368"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"628.97894"	"1884.92228"	"1884.92106"	"0.65"	"0.00041"	"14/144"	"14"	"144"	"441653.282043457"	"HCD"	"MS2"	"23.41771"	"10.9"	"100.000"	"107.5058"	"38567"	"38567"	"38556"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.0"	""	"14.1"	""	"14.8"	""	"18.0"	""	"24.6"	"17.3"	""	"803"	"37"	"36.000"	"29.000"	"0.00806650764262405"	"17"	"0"	"6.835E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"628.97913"	"1884.92282"	"1884.92106"	"0.94"	"0.00059"	"15/144"	"15"	"144"	"362639.298278809"	"HCD"	"MS2"	"14.26568"	"9.9"	"100.000"	"107.8159"	"38704"	"38704"	"38694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"11.7"	""	"12.9"	""	"21.2"	""	"17.0"	"17.9"	""	"799"	"39"	"36.000"	"29.000"	"0.0055400895363432"	"16"	"0"	"3.626E-06"	"0.95"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSLLQDGEFTMDLR"	"[R].dSLLQDGEFTmDLR.[T]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"P62963"	"Profilin-1 OS=Rattus norvegicus OX=10116 GN=Pfn1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"942.96509"	"1884.92290"	"1884.92106"	"0.98"	"0.00092"	"4/144"	"4"	"144"	"82212.8145751953"	"HCD"	"MS2"	"0"	"3.5"	"100.000"	"107.6402"	"38618"	"38618"	"38601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.8"	""	"3.4"	""	"4.5"	""	"7.0"	""	"4.5"	"5.4"	""	"799"	"15"	"36.000"	"29.000"	"1.18172598038734"	"13"	"0.0001991"	"0.003033"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"629.00018"	"1884.98600"	"1884.98897"	"-1.58"	"-0.00099"	"9/124"	"9"	"124"	"452196.809265137"	"HCD"	"MS2"	"16.37002"	"27.4"	"100.000"	"58.8254"	"18939"	"18939"	"18917"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"35.3"	""	"39.0"	""	"38.8"	"0.8"	"52.7"	"56.3"	""	"1138"	"8"	"37.000"	"30.000"	"9.01804226510374"	"17"	"0.009348"	"0.1214"	"0.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"629.00073"	"1884.98764"	"1884.98897"	"-0.70"	"-0.00044"	"6/124"	"6"	"124"	"1560139.64422607"	"HCD"	"MS2"	"10.79263"	"48.2"	"100.000"	"50.7944"	"15677"	"15677"	"15655"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.7"	""	"56.6"	""	"71.1"	""	"77.7"	""	"86.5"	"93.7"	""	"1144"	"44"	"37.000"	"30.000"	"0.00223560992393254"	"16"	"0"	"0.0003993"	"0.53"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RFDDAVVQSDMK"	"[R].rFDDAVVQSDmk.[H]"	"N-Term(TMT6plex); M11(Oxidation); K12(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.00104"	"1884.98856"	"1884.98897"	"-0.22"	"-0.00014"	"12/124"	"12"	"124"	"615528.206604004"	"HCD"	"MS2"	"41.20209"	"23.0"	"100.000"	"56.3770"	"17943"	"17943"	"17923"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"31.3"	""	"29.7"	""	"37.4"	""	"49.2"	"48.7"	""	"1128"	"8"	"37.000"	"30.000"	"9.73372571082475"	"13"	"0.00296"	"0.03157"	"0.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SIRPDNMSEYSK"	"[R].sIRPDNMSEYSk.[Q]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"Q4QQW4"	"Histone deacetylase 1 OS=Rattus norvegicus OX=10116 GN=Hdac1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"629.00134"	"1884.98948"	"1884.98897"	"0.27"	"0.00017"	"11/126"	"11"	"126"	"833357.326293945"	"HCD"	"MS2"	"65.40591"	"51.3"	"100.000"	"52.1990"	"16245"	"16245"	"16219"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.2"	""	"65.7"	""	"78.0"	""	"72.8"	"1.5"	"90.2"	"98.5"	""	"1135"	"1"	"37.000"	"30.000"	"43.8496232041812"	"13"	"0.005712"	"0.07097"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLEEDHACIPIK"	"[K].dLEEDHAcIPIk.[K]"	"N-Term(TMT6plex); C8(Methylthio); K12(TMT6plex)"	"1"	"1"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"P05197"	"Elongation factor 2 OS=Rattus norvegicus OX=10116 GN=Eef2 PE=1 SV=4"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"629.66321"	"1886.97507"	"1886.97563"	"-0.29"	"-0.00019"	"9/96"	"9"	"96"	"384956.343017578"	"HCD"	"MS2"	"0"	"19.1"	"100.000"	"95.6967"	"33823"	"33823"	"33792"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"19.9"	""	"26.6"	""	"26.7"	""	"35.9"	"41.3"	""	"1049"	"10"	"37.000"	"30.000"	"5.28135660312772"	"16"	"0.005266"	"0.06679"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TTITTTSSSSTTVGSAR"	"[R].tTITTTSSSSTTVGSAR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"Q6VBQ5"	"Myeloid-associated differentiation marker OS=Rattus norvegicus OX=10116 GN=Myadm PE=1 SV=1"	"0"	"2"	"2"	"0.8421"	"0.0000"	"1"	"1"	"1"	"943.99689"	"1886.98650"	"1886.98683"	"-0.18"	"-0.00017"	"8/156"	"8"	"156"	"101313.194763184"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"37.7490"	"10348"	"10348"	"10325"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"2.0"	""	"3.1"	""	"13.7"	""	"17.6"	"18.9"	""	"1064"	"19"	"37.000"	"30.000"	"0.698090346278216"	"17"	"0.0001686"	"0.001265"	"0.427"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWNDPSVQQDIK"	"[R].tWNDPSVQQDIk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"630.34387"	"1889.01706"	"1889.01690"	"0.09"	"0.00006"	"10/124"	"10"	"124"	"2137457.62176514"	"HCD"	"MS2"	"30.58941"	"66.0"	"100.000"	"85.0123"	"29548"	"29548"	"29531"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"106.5"	""	"81.8"	""	"90.5"	""	"121.9"	""	"110.3"	"117.4"	""	"1209"	"26"	"37.000"	"30.000"	"0.140409439339787"	"20"	"0"	"0.0002134"	"0.586"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWNDPSVQQDIK"	"[R].tWNDPSVQQDIk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"630.34418"	"1889.01798"	"1889.01690"	"0.57"	"0.00036"	"11/124"	"11"	"124"	"1783857.54901123"	"HCD"	"MS2"	"42.82529"	"64.4"	"100.000"	"85.0016"	"29514"	"29514"	"29497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.3"	""	"85.8"	""	"82.2"	""	"114.6"	"1.6"	"124.1"	"107.6"	""	"1206"	"18"	"37.000"	"30.000"	"0.916890160428695"	"26"	"0.0001991"	"0.002051"	"0.384"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TWNDPSVQQDIK"	"[R].tWNDPSVQQDIk.[F]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"2"	"2"	"0.1000"	"0.0000"	"1"	"1"	"1"	"945.01270"	"1889.01811"	"1889.01690"	"0.64"	"0.00061"	"4/124"	"4"	"124"	"106176.427185059"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"85.1023"	"29585"	"29585"	"29561"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"6.9"	""	"12.0"	""	"12.4"	""	"12.8"	"19.8"	""	"1201"	"10"	"37.000"	"30.000"	"6.55409922037478"	"22"	"0.007412"	"0.09398"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILDQGEDFPASELAR"	"[K].iLDQGEDFPASELAR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"945.49463"	"1889.98198"	"1889.98062"	"0.72"	"0.00068"	"3/152"	"3"	"152"	"50094.7827148438"	"HCD"	"MS2"	"14.64822"	"1.9"	"100.000"	"109.6831"	"39394"	"39394"	"39383"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.9"	""	"2.0"	""	""	""	"3.2"	""	"6.9"	"3.5"	""	"1112"	"1"	"37.000"	"30.000"	"40.8389710695355"	"13"	"0.009239"	"0.119"	"0.011"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FDREVDIGIPDATGR"	"[R].fDREVDIGIPDATGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"630.66785"	"1889.98899"	"1889.99186"	"-1.52"	"-0.00096"	"13/158"	"13"	"158"	"482452.576293945"	"HCD"	"MS2"	"9.432798"	"16.8"	"100.000"	"95.1964"	"33620"	"33620"	"33592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"28.5"	""	"29.6"	""	"22.7"	""	"23.7"	"24.2"	""	"1155"	"9"	"37.000"	"30.000"	"6.81635167088873"	"13"	"0.001049"	"0.008775"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"631.64966"	"1892.93442"	"1892.93738"	"-1.56"	"-0.00099"	"4/134"	"4"	"134"	"511437.476928711"	"HCD"	"MS2"	"32.89982"	"25.5"	"100.000"	"67.0406"	"22269"	"22269"	"22247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.2"	""	"28.1"	""	"29.3"	""	"40.5"	"1.6"	"60.2"	"51.5"	""	"795"	"13"	"35.000"	"29.000"	"2.00141491993192"	"16"	"0.0001991"	"0.004485"	"0.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"631.64996"	"1892.93534"	"1892.93738"	"-1.08"	"-0.00068"	"10/134"	"10"	"134"	"2510443.77435303"	"HCD"	"MS2"	"15.49662"	"37.6"	"100.000"	"45.3410"	"13431"	"13431"	"13410"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.6"	""	"42.0"	""	"45.2"	""	"75.4"	"0.5"	"72.1"	"73.1"	""	"805"	"75"	"36.000"	"29.000"	"1.29648018849158E-06"	"27"	"0"	"1.377E-08"	"1.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8500"	"0.0000"	"1"	"1"	"1"	"631.65051"	"1892.93698"	"1892.93738"	"-0.21"	"-0.00013"	"12/134"	"12"	"134"	"561988.772583008"	"HCD"	"MS2"	"22.287"	"33.0"	"100.000"	"56.6315"	"18045"	"18045"	"18025"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"36.2"	""	"41.1"	""	"49.3"	"0.4"	"80.2"	"69.5"	""	"830"	"20"	"36.000"	"29.000"	"0.408364608890871"	"17"	"0.0001991"	"0.003861"	"0.327"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8143"	"0.0000"	"1"	"1"	"1"	"631.65057"	"1892.93717"	"1892.93738"	"-0.11"	"-0.00007"	"10/134"	"10"	"134"	"3371667.19061279"	"HCD"	"MS2"	"16.62104"	"40.4"	"100.000"	"45.0660"	"13353"	"13353"	"13331"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.2"	""	"41.6"	""	"62.7"	""	"68.5"	"0.3"	"75.7"	"73.5"	""	"828"	"70"	"36.000"	"29.000"	"4.11150044046266E-06"	""	"0"	"1.099E-08"	"1.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.9322"	"0.0000"	"1"	"1"	"1"	"631.65082"	"1892.93790"	"1892.93738"	"0.28"	"0.00017"	"9/134"	"9"	"134"	"1364147.72290039"	"HCD"	"MS2"	"12.14194"	"43.4"	"100.000"	"45.6722"	"13566"	"13566"	"13541"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.0"	""	"49.1"	""	"57.1"	""	"80.1"	"2.6"	"78.4"	"89.9"	""	"840"	"59"	"36.000"	"29.000"	"5.10798120271474E-05"	"20"	"0"	"9.89E-07"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.7903"	"0.0000"	"1"	"1"	"1"	"631.65088"	"1892.93808"	"1892.93738"	"0.37"	"0.00024"	"17/134"	"17"	"134"	"391591.351074219"	"HCD"	"MS2"	"28.8398"	"17.1"	"100.000"	"60.6256"	"19669"	"19669"	"19644"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.3"	""	"17.0"	""	"20.7"	""	"26.5"	""	"42.9"	"35.7"	""	"840"	"62"	"36.000"	"29.000"	"2.42800339910401E-05"	"29"	"0"	"1.103E-06"	"1.057"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"0.8214"	"0.0000"	"1"	"1"	"1"	"631.65088"	"1892.93808"	"1892.93738"	"0.37"	"0.00024"	"9/134"	"9"	"134"	"1270876.90435791"	"HCD"	"MS2"	"8.661423"	"43.1"	"100.000"	"45.3559"	"13471"	"13471"	"13451"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.2"	""	"56.5"	""	"54.4"	""	"71.3"	"0.1"	"85.7"	"81.4"	""	"840"	"56"	"36.000"	"29.000"	"0.000115146115220971"	"26"	"0"	"7.139E-07"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPITVSSEQMSHFR"	"[K].ePITVSSEQmSHFR.[K]"	"N-Term(TMT6plex); M10(Oxidation)"	"1"	"1"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"P27139"	"Carbonic anhydrase 2 OS=Rattus norvegicus OX=10116 GN=Ca2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"631.65216"	"1892.94193"	"1892.93738"	"2.40"	"0.00152"	"9/134"	"9"	"134"	"574560.167602539"	"HCD"	"MS2"	"32.14708"	"25.7"	"100.000"	"63.5042"	"20804"	"20804"	"20779"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.2"	""	"38.8"	""	"36.8"	""	"34.8"	"1.7"	"48.3"	"52.1"	""	"874"	"12"	"36.000"	"29.000"	"2.50888893984602"	"13"	"0.0008247"	"0.007564"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMQNVEHVPLTLDR"	"[K].nMQNVEHVPLTLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.33716"	"1894.99692"	"1895.00065"	"-1.97"	"-0.00124"	"13/144"	"13"	"144"	"578850.840515137"	"HCD"	"MS2"	"29.78865"	"23.9"	"100.000"	"75.3823"	"25622"	"25622"	"25601"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"34.5"	""	"30.8"	""	"31.4"	""	"54.3"	"50.8"	""	"1233"	"14"	"37.000"	"30.000"	"2.67259456525911"	"13"	"0"	"0.000273"	"0.564"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMQNVEHVPLTLDR"	"[K].nMQNVEHVPLTLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.33832"	"1895.00040"	"1895.00065"	"-0.13"	"-0.00008"	"10/144"	"10"	"144"	"2323681.06408691"	"HCD"	"MS2"	"12.99583"	"56.7"	"100.000"	"75.0781"	"25498"	"25498"	"25476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"87.8"	""	"78.6"	""	"74.5"	""	"89.3"	""	"104.0"	"106.2"	""	"1222"	"32"	"37.000"	"30.000"	"0.0427603459557389"	"14"	"0"	"5.023E-06"	"0.921"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMQNVEHVPLTLDR"	"[K].nMQNVEHVPLTLDR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"P18421"	"Proteasome subunit beta type-1 OS=Rattus norvegicus OX=10116 GN=Psmb1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"632.33856"	"1895.00113"	"1895.00065"	"0.26"	"0.00016"	"11/144"	"11"	"144"	"1745965.6171875"	"HCD"	"MS2"	"14.05406"	"31.1"	"100.000"	"75.2381"	"25594"	"25594"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.9"	""	"43.3"	""	"41.8"	""	"46.0"	""	"60.1"	"58.0"	""	"1229"	"42"	"37.000"	"30.000"	"0.00427092443158316"	"15"	"0"	"1.367E-06"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVFLEESSQQEK"	"[K].iVFLEESSQQEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"Q9WTT6"	"Guanine deaminase OS=Rattus norvegicus OX=10116 GN=Gda PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"632.35663"	"1895.05533"	"1895.05261"	"1.43"	"0.00091"	"6/106"	"6"	"106"	"293804.533325195"	"HCD"	"MS2"	"21.97546"	"13.6"	"100.000"	"103.7935"	"37114"	"37114"	"37086"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"13.6"	""	"17.5"	""	"24.5"	""	"28.1"	"26.2"	""	"1078"	"13"	"37.000"	"30.000"	"2.75796509356226"	"16"	"0.0001686"	"0.001681"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"APAFLSADEVQDHLR"	"[R].aPAFLSADEVQDHLR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"Q9QYU4"	"Ketimine reductase mu-crystallin OS=Rattus norvegicus OX=10116 GN=Crym PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"633.33801"	"1897.99948"	"1897.99694"	"1.34"	"0.00085"	"13/132"	"13"	"132"	"240072.187744141"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"96.4932"	"34145"	"34145"	"34121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.1"	""	"12.5"	""	"11.8"	""	"15.3"	""	"21.5"	"20.0"	""	"1163"	"43"	"37.000"	"30.000"	"0.00272614981717472"	"21"	"9.9E-05"	"0.0005535"	"0.501"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"949.99060"	"1898.97392"	"1898.97563"	"-0.90"	"-0.00085"	"8/102"	"8"	"102"	"144392.755249023"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"78.6858"	"26960"	"26960"	"26929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.8"	""	"6.7"	""	"5.8"	""	"43.3"	""	"12.4"	"15.0"	""	"1096"	"17"	"37.000"	"30.000"	"1.13443745913749"	"14"	"0.00212"	"0.01954"	"0.181"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.66309"	"1898.97470"	"1898.97563"	"-0.49"	"-0.00031"	"12/102"	"12"	"102"	"1359222.18933105"	"HCD"	"MS2"	"10.10031"	"45.8"	"100.000"	"78.6237"	"26934"	"26934"	"26913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.4"	""	"42.6"	""	"36.7"	""	"155.1"	"0.3"	"83.4"	"78.8"	""	"1104"	"24"	"37.000"	"30.000"	"0.225911884170966"	"14"	"0"	"0.0001488"	"0.618"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"949.99103"	"1898.97478"	"1898.97563"	"-0.45"	"-0.00042"	"10/102"	"10"	"102"	"270028.925292969"	"HCD"	"MS2"	"0"	"20.6"	"100.000"	"79.0086"	"27091"	"27091"	"27072"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.6"	""	"18.6"	""	"12.1"	""	"90.0"	""	"37.7"	"26.3"	""	"1104"	"21"	"37.000"	"30.000"	"0.426519682972827"	"14"	"0.0008247"	"0.007591"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.66315"	"1898.97489"	"1898.97563"	"-0.39"	"-0.00025"	"11/102"	"11"	"102"	"4654549.18560791"	"HCD"	"MS2"	"3.163408"	"117.7"	"100.000"	"78.9303"	"27059"	"27059"	"27040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"83.6"	""	"85.0"	""	"76.9"	""	"511.7"	"0.1"	"190.7"	"167.2"	""	"1105"	"32"	"37.000"	"30.000"	"0.0326086096794944"	"15"	"0"	"5.983E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"949.99121"	"1898.97515"	"1898.97563"	"-0.25"	"-0.00024"	"12/102"	"12"	"102"	"241763.230651855"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"79.1398"	"27171"	"27171"	"27150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"13.4"	""	"12.4"	""	"74.8"	"1.0"	"28.1"	"26.2"	""	"1105"	"39"	"37.000"	"30.000"	"0.00748742150323947"	"16"	"0.0001991"	"0.005357"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.66327"	"1898.97525"	"1898.97563"	"-0.20"	"-0.00012"	"12/102"	"12"	"102"	"4761882.45672607"	"HCD"	"MS2"	"5.949993"	"116.9"	"100.000"	"79.1283"	"27166"	"27166"	"27150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.0"	""	"92.0"	""	"94.4"	""	"473.0"	"0.7"	"197.7"	"170.8"	""	"1106"	"30"	"37.000"	"30.000"	"0.0551728135293871"	"14"	"0"	"5.458E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"633.66345"	"1898.97580"	"1898.97563"	"0.09"	"0.00006"	"11/102"	"11"	"102"	"2549934.40240479"	"HCD"	"MS2"	"7.816636"	"65.8"	"100.000"	"78.8428"	"27050"	"27050"	"27031"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.4"	""	"47.2"	""	"45.3"	""	"271.9"	"1.2"	"112.9"	"99.0"	""	"1114"	"37"	"37.000"	"30.000"	"0.0116106142188519"	"16"	"0"	"2.025E-05"	"0.797"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GGEFEMMPLGVNK"	"[R].gGEFEmmPLGVNk.[S]"	"N-Term(TMT6plex); M6(Oxidation); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"Q03626"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"949.99170"	"1898.97612"	"1898.97563"	"0.26"	"0.00025"	"9/102"	"9"	"102"	"126389.006347656"	"HCD"	"MS2"	"0"	"9.7"	"100.000"	"78.8240"	"27043"	"27043"	"27015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.4"	""	"8.4"	""	"5.0"	""	"42.8"	""	"17.6"	"13.2"	""	"1113"	"11"	"37.000"	"30.000"	"4.05943104456668"	"14"	"0.00212"	"0.01889"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AGSDGESIGNCPFSQR"	"[K].aGSDGESIGNcPFSQR.[L]"	"N-Term(TMT6plex); C11(Methylthio)"	"1"	"2"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7; Q811Q2"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3; Chloride intracellular channel protein 6 OS=Rattus norvegicus OX=10116 GN=Clic6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"633.95575"	"1899.85270"	"1899.85266"	"0.02"	"0.00001"	"5/154"	"5"	"154"	"160938.682739258"	"HCD"	"MS2"	"37.42878"	"10.2"	"100.000"	"90.7812"	"31834"	"31834"	"31815"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"13.4"	""	"14.4"	""	"16.8"	""	"22.1"	"18.7"	""	"296"	"4"	"31.000"	"24.000"	"6.15547703531153"	"13"	"0.001217"	"0.009403"	"0.247"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVHERDEAAYGALR"	"[R].aLVHERDEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"475.76129"	"1900.02334"	"1900.02382"	"-0.26"	"-0.00012"	"16/136"	"16"	"136"	"4900946.13244629"	"HCD"	"MS2"	"31.84419"	"68.5"	"100.000"	"43.5734"	"12712"	"12712"	"12688"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"129.0"	""	"90.6"	""	"100.3"	""	"123.0"	""	"89.9"	"114.8"	""	"1249"	"30"	"37.000"	"30.000"	"0.0614514935547828"	"14"	"0"	"2.982E-06"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALVHERDEAAYGALR"	"[R].aLVHERDEAAYGALR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"Q63798"	"Proteasome activator complex subunit 2 OS=Rattus norvegicus OX=10116 GN=Psme2 PE=2 SV=3"	"1"	"4"	"4"	"0.9032"	"0.0000"	"1"	"1"	"1"	"475.76147"	"1900.02407"	"1900.02382"	"0.13"	"0.00006"	"14/136"	"14"	"136"	"4857961.9598999"	"HCD"	"MS2"	"27.42489"	"70.7"	"100.000"	"43.3942"	"12673"	"12673"	"12651"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"133.9"	""	"110.7"	""	"95.5"	""	"122.4"	"0.5"	"89.5"	"114.3"	""	"1244"	"31"	"37.000"	"30.000"	"0.0456867625993725"	"17"	"0"	"1.121E-05"	"0.849"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.5333"	"0.0000"	"1"	"1"	"1"	"635.00134"	"1902.98948"	"1902.99113"	"-0.87"	"-0.00055"	"12/126"	"12"	"126"	"1806734.08947754"	"HCD"	"MS2"	"26.07"	"29.0"	"100.000"	"75.1011"	"25507"	"25507"	"25492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.6"	""	"45.7"	""	"45.8"	""	"38.8"	"1.7"	"52.8"	"50.6"	""	"1128"	"15"	"37.000"	"30.000"	"1.90668567620174"	"20"	"0"	"5.542E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"635.00146"	"1902.98984"	"1902.99113"	"-0.68"	"-0.00043"	"13/126"	"13"	"126"	"744486.276245117"	"HCD"	"MS2"	"21.43604"	"15.8"	"100.000"	"74.9546"	"25479"	"25479"	"25459"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.6"	""	"20.3"	""	"24.8"	""	"24.5"	"2.3"	"31.5"	"22.2"	""	"1113"	"23"	"37.000"	"30.000"	"0.252618509665838"	"19"	"0"	"1.489E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"635.00177"	"1902.99076"	"1902.99113"	"-0.19"	"-0.00012"	"11/126"	"11"	"126"	"2201971.99780273"	"HCD"	"MS2"	"22.02507"	"34.5"	"100.000"	"75.2358"	"25593"	"25593"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.0"	""	"54.6"	""	"42.8"	""	"46.2"	"3.1"	"64.8"	"63.2"	""	"1118"	"11"	"37.000"	"30.000"	"4.7142412959023"	"14"	"0"	"5.951E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FEEPAPLPYDSRPR"	"[R].fEEPAPLPYDSRPR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"A0A0G2K2P5"	"Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1"	"0"	"3"	"3"	"0.6875"	"0.0000"	"1"	"1"	"1"	"635.00201"	"1902.99149"	"1902.99113"	"0.19"	"0.00012"	"11/126"	"11"	"126"	"618463.510314941"	"HCD"	"MS2"	"6.394382"	"16.3"	"100.000"	"74.7945"	"25383"	"25383"	"25361"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.0"	""	"24.4"	""	"21.9"	""	"25.9"	"1.1"	"27.9"	"28.9"	""	"1108"	"16"	"37.000"	"30.000"	"1.29571583021728"	"18"	"9.9E-05"	"0.0006085"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gImGEDSYPYIGk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"635.33264"	"1903.98337"	"1903.98757"	"-2.21"	"-0.00140"	"9/100"	"9"	"100"	"621477.731079102"	"HCD"	"MS2"	"28.04407"	"21.4"	"100.000"	"92.7901"	"32644"	"32644"	"32624"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"27.2"	""	"28.2"	""	"44.9"	""	"41.0"	"34.3"	""	"1073"	"30"	"37.000"	"30.000"	"0.0482580452490864"	"15"	"0"	"9.25E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gImGEDSYPYIGk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"635.33276"	"1903.98374"	"1903.98757"	"-2.01"	"-0.00128"	"10/100"	"10"	"100"	"363357.372131348"	"HCD"	"MS2"	"14.83749"	"15.0"	"100.000"	"92.9828"	"32758"	"32758"	"32739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.5"	""	"15.9"	""	"21.3"	""	"28.0"	""	"33.4"	"26.8"	""	"1072"	"33"	"37.000"	"30.000"	"0.029727938214544"	"16"	"9.9E-05"	"0.0004157"	"0.526"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gImGEDSYPYIGk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.33307"	"1903.98465"	"1903.98757"	"-1.53"	"-0.00097"	"10/100"	"10"	"100"	"378192.337280273"	"HCD"	"MS2"	"16.71105"	"15.1"	"100.000"	"93.0749"	"32759"	"32759"	"32742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"18.6"	""	"22.5"	""	"26.5"	""	"29.3"	"29.3"	""	"1072"	"29"	"37.000"	"30.000"	"0.0622536457018423"	"15"	"0"	"1.44E-05"	"0.827"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gImGEDSYPYIGk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"635.33368"	"1903.98648"	"1903.98757"	"-0.57"	"-0.00036"	"11/100"	"11"	"100"	"755410.366760254"	"HCD"	"MS2"	"36.76323"	"24.6"	"100.000"	"92.6808"	"32641"	"32641"	"32620"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"33.0"	""	"31.7"	""	"47.0"	""	"47.6"	"41.4"	""	"1105"	"27"	"37.000"	"30.000"	"0.114638971839384"	"18"	"0"	"1.925E-05"	"0.801"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gImGEDSYPYIGk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.49695"	"1903.98662"	"1903.98757"	"-0.50"	"-0.00048"	"6/100"	"6"	"100"	"90117.7907104492"	"HCD"	"MS2"	"35.54074"	"6.1"	"100.000"	"92.7290"	"32661"	"32661"	"32632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"4.1"	""	"8.4"	""	"12.8"	""	"10.9"	"12.2"	""	"1107"	"4"	"37.000"	"30.000"	"24.3847116950877"	"13"	"0.006613"	"0.08244"	"0.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GIMGEDSYPYIGK"	"[K].gImGEDSYPYIGk.[N]"	"N-Term(TMT6plex); M3(Oxidation); K13(TMT6plex)"	"1"	"1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"P00786"	"Pro-cathepsin H OS=Rattus norvegicus OX=10116 GN=Ctsh PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"952.49854"	"1903.98979"	"1903.98757"	"1.17"	"0.00111"	"7/100"	"7"	"100"	"106162.770568848"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"92.8824"	"32682"	"32682"	"32653"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.5"	""	"8.8"	""	"8.2"	""	"23.0"	""	"17.4"	"11.9"	""	"1102"	"7"	"37.000"	"30.000"	"10.3312197394515"	"13"	"0.003818"	"0.04204"	"0.111"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EFHLNESGDPSSK"	"[K].eFHLNESGDPSSk.[S]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"Q63945"	"Protein SET OS=Rattus norvegicus OX=10116 GN=Set PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"635.66278"	"1904.97379"	"1904.97543"	"-0.86"	"-0.00055"	"10/134"	"10"	"134"	"566806.163208008"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"52.7285"	"16427"	"16427"	"16401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.9"	""	"45.2"	""	"44.0"	""	"40.8"	"0.4"	"52.6"	"52.3"	""	"1081"	"21"	"37.000"	"30.000"	"0.408127349053167"	"14"	"9.9E-05"	"0.0008053"	"0.467"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELNLDQFHDK"	"[K].tSELNLDQFHDk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"635.67462"	"1905.00931"	"1905.01181"	"-1.31"	"-0.00083"	"16/122"	"16"	"122"	"910905.35949707"	"HCD"	"MS2"	"22.783"	"43.8"	"100.000"	"80.0092"	"27498"	"27498"	"27478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.7"	""	"48.2"	""	"48.5"	""	"82.4"	"0.9"	"92.4"	"96.4"	""	"1223"	"44"	"37.000"	"30.000"	"0.00250262893424901"	"19"	"0"	"2.384E-06"	"0.988"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELNLDQFHDK"	"[K].tSELNLDQFHDk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.7660"	"0.0000"	"1"	"1"	"1"	"635.67499"	"1905.01041"	"1905.01181"	"-0.74"	"-0.00047"	"15/122"	"15"	"122"	"2468246.57080078"	"HCD"	"MS2"	"16.72674"	"87.8"	"100.000"	"79.8225"	"27449"	"27449"	"27429"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.5"	""	"81.8"	""	"90.3"	""	"157.3"	"3.8"	"192.6"	"190.6"	""	"1231"	"47"	"37.000"	"30.000"	"0.00111744989043687"	"26"	"0"	"5.2E-07"	"1.124"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSELNLDQFHDK"	"[K].tSELNLDQFHDk.[T]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"P35565"	"Calnexin OS=Rattus norvegicus OX=10116 GN=Canx PE=1 SV=1"	"0"	"3"	"3"	"0.8704"	"0.0000"	"1"	"1"	"1"	"635.67529"	"1905.01133"	"1905.01181"	"-0.26"	"-0.00016"	"17/122"	"17"	"122"	"2232714.46716309"	"HCD"	"MS2"	"19.69636"	"83.3"	"100.000"	"79.7028"	"27373"	"27373"	"27353"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.6"	""	"74.9"	""	"91.7"	""	"164.7"	"4.2"	"169.7"	"182.0"	""	"1241"	"54"	"37.000"	"30.000"	"0.000223739047994929"	"22"	"0"	"6.837E-07"	"1.099"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"635.67645"	"1905.01480"	"1905.01518"	"-0.20"	"-0.00013"	"13/108"	"13"	"108"	"1264206.57806396"	"HCD"	"MS2"	"10.00449"	"35.5"	"100.000"	"84.2860"	"29227"	"29227"	"29209"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.6"	""	"39.8"	""	"38.0"	""	"49.0"	""	"79.4"	"71.1"	""	"1201"	"55"	"37.000"	"30.000"	"0.000207736596384586"	"25"	"0"	"5.868E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVDEQMLNVQNK"	"[K].eVDEQMLNVQNk.[N]"	"N-Term(TMT6plex); K12(TMT6plex)"	"2"	"4"	"P85108; Q6P9T8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1;Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1"	"P85108; Q6P9T8; P69897; Q3KRE8"	"Tubulin beta-2A chain OS=Rattus norvegicus OX=10116 GN=Tubb2a PE=1 SV=1; Tubulin beta-4B chain OS=Rattus norvegicus OX=10116 GN=Tubb4b PE=1 SV=1; Tubulin beta-5 chain OS=Rattus norvegicus OX=10116 GN=Tubb5 PE=1 SV=1; Tubulin beta-2B chain OS=Rattus norvegicus OX=10116 GN=Tubb2b PE=1 SV=1"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"635.67645"	"1905.01480"	"1905.01518"	"-0.20"	"-0.00013"	"13/108"	"13"	"108"	"1283442.12835693"	"HCD"	"MS2"	"1.577259"	"41.2"	"100.000"	"84.3201"	"29269"	"29269"	"29251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"59.6"	""	"42.7"	""	"51.9"	""	"58.1"	""	"88.6"	"94.1"	""	"1201"	"43"	"37.000"	"30.000"	"0.00315873368467619"	"22"	"0"	"6.152E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.6512"	"0.0000"	"1"	"1"	"1"	"953.97400"	"1906.94072"	"1906.94179"	"-0.56"	"-0.00054"	"11/134"	"11"	"134"	"93702.8580932617"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"86.7022"	"30229"	"30229"	"30210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.2"	""	"6.6"	""	"10.2"	""	"5.8"	""	"5.6"	"5.9"	""	"842"	"43"	"36.000"	"29.000"	"0.0021891831454061"	""	"0"	"0.0001019"	"0.652"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"953.97424"	"1906.94121"	"1906.94179"	"-0.31"	"-0.00029"	"9/134"	"9"	"134"	"110243.63458252"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"86.7004"	"30195"	"30195"	"30170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.1"	""	"6.4"	""	"8.0"	""	"1.8"	""	"5.1"	"9.6"	""	"845"	"16"	"36.000"	"29.000"	"0.9524160671344"	"15"	"9.9E-05"	"0.0009752"	"0.45"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"953.97437"	"1906.94145"	"1906.94179"	"-0.18"	"-0.00017"	"4/134"	"4"	"134"	"64455.7047729492"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"86.3934"	"30075"	"30075"	"30056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	""	"3.3"	""	"4.0"	""	"2.5"	""	"1.9"	"3.9"	""	"846"	"9"	"36.000"	"29.000"	"4.91292763654465"	"13"	"0.0001991"	"0.004995"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVLMESPPDYSTGPR"	"[K].eVLMESPPDYSTGPR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"P11685"	"Pulmonary surfactant-associated protein C OS=Rattus norvegicus OX=10116 GN=Sftpc PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"953.97534"	"1906.94341"	"1906.94179"	"0.85"	"0.00081"	"4/134"	"4"	"134"	"67437.8630981445"	"HCD"	"MS2"	"0"	"1.8"	"100.000"	"86.3860"	"30104"	"30104"	"30087"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.4"	""	"2.2"	""	"4.5"	""	""	""	""	"4.9"	""	"874"	"3"	"36.000"	"29.000"	"23.3604625056477"	"13"	"0.002189"	"0.02072"	"0.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"636.33990"	"1907.00516"	"1907.00717"	"-1.05"	"-0.00067"	"16/150"	"16"	"150"	"908756.93927002"	"HCD"	"MS2"	"26.38005"	"21.3"	"100.000"	"95.6784"	"33815"	"33815"	"33792"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.2"	""	"28.0"	""	"29.0"	""	"41.5"	""	"37.2"	"36.6"	""	"1193"	"60"	"37.000"	"30.000"	"5.67035759415972E-05"	"18"	"0"	"1.92E-06"	"1.007"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"636.34009"	"1907.00571"	"1907.00717"	"-0.77"	"-0.00049"	"14/150"	"14"	"150"	"314632.405517578"	"HCD"	"MS2"	"8.198661"	"11.3"	"100.000"	"96.0429"	"33995"	"33995"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.4"	""	"17.4"	""	"12.7"	""	"15.8"	""	"23.2"	"20.6"	""	"1229"	"57"	"37.000"	"30.000"	"0.000114162083765385"	"20"	"0"	"4.676E-07"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"636.34021"	"1907.00608"	"1907.00717"	"-0.57"	"-0.00037"	"15/150"	"15"	"150"	"400715.832275391"	"HCD"	"MS2"	"2.771545"	"11.4"	"100.000"	"95.9669"	"33932"	"33932"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"12.8"	""	"12.1"	""	"20.0"	""	"19.8"	"22.3"	""	"1216"	"44"	"37.000"	"30.000"	"0.00223307638702835"	"15"	"0"	"1.771E-05"	"0.808"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"3"	"3"	"0.9692"	"0.0000"	"1"	"1"	"1"	"636.34033"	"1907.00644"	"1907.00717"	"-0.38"	"-0.00024"	"16/150"	"16"	"150"	"876018.088562012"	"HCD"	"MS2"	"22.85883"	"19.2"	"100.000"	"95.6920"	"33853"	"33853"	"33836"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"26.1"	""	"25.1"	""	"35.2"	"2.6"	"32.6"	"32.3"	""	"1211"	"65"	"37.000"	"30.000"	"1.94587145614671E-05"	"19"	"0"	"1.401E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.8235"	"0.0000"	"1"	"1"	"1"	"954.00726"	"1907.00725"	"1907.00717"	"0.04"	"0.00004"	"8/150"	"8"	"150"	"110877.309204102"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"95.9689"	"33965"	"33965"	"33947"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.5"	""	"8.5"	""	"7.1"	""	"9.0"	""	"10.0"	"8.7"	""	"1205"	"17"	"37.000"	"30.000"	"1.11675280310742"	"16"	"9.9E-05"	"0.0006764"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.7143"	"0.0000"	"1"	"1"	"1"	"954.00775"	"1907.00823"	"1907.00717"	"0.55"	"0.00053"	"12/150"	"12"	"150"	"209442.811401367"	"HCD"	"MS2"	"0"	"9.5"	"100.000"	"95.7130"	"33829"	"33829"	"33808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.3"	""	"17.9"	""	"14.9"	""	"13.3"	""	"13.7"	"11.9"	""	"1211"	"35"	"37.000"	"30.000"	"0.0207545894753876"	"25"	"0"	"5.335E-05"	"0.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LTVVDTPGYGDAINSR"	"[R].lTVVDTPGYGDAINSR.[D]"	"N-Term(TMT6plex)"	"1"	"1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"Q91Y81"	"Septin-2 OS=Rattus norvegicus OX=10116 GN=Sept2 PE=1 SV=1"	"0"	"2"	"2"	"0.5200"	"0.0000"	"1"	"1"	"1"	"954.00787"	"1907.00847"	"1907.00717"	"0.68"	"0.00065"	"5/150"	"5"	"150"	"163800.049072266"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"95.6735"	"33846"	"33846"	"33820"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.7"	""	"11.7"	""	"11.2"	""	"9.0"	""	"16.2"	"10.1"	""	"1208"	"25"	"37.000"	"30.000"	"0.189686725110124"	"26"	"0"	"0.0003662"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAPEELTVVLGQDR"	"[K].rPAPEELTVVLGQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"637.02808"	"1909.06968"	"1909.07044"	"-0.40"	"-0.00026"	"7/158"	"7"	"158"	"1062872.18933105"	"HCD"	"MS2"	"2.065073"	"17.6"	"100.000"	"85.3706"	"29664"	"29664"	"29652"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.4"	""	"23.2"	""	"21.6"	""	"26.7"	""	"33.2"	"34.0"	""	"957"	"25"	"36.000"	"29.000"	"0.141540896524492"	"15"	"0"	"1.069E-06"	"1.059"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAPEELTVVLGQDR"	"[K].rPAPEELTVVLGQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"637.02832"	"1909.07041"	"1909.07044"	"-0.02"	"-0.00001"	"8/158"	"8"	"158"	"1411017.02453613"	"HCD"	"MS2"	"9.072846"	"24.1"	"100.000"	"85.3192"	"29673"	"29673"	"29653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.0"	""	"41.7"	""	"30.3"	""	"31.6"	""	"37.4"	"44.1"	""	"946"	"50"	"36.000"	"29.000"	"0.000445513779155304"	"16"	"0"	"4.665E-07"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAPEELTVVLGQDR"	"[K].rPAPEELTVVLGQDR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"D3ZTE0"	"Coagulation factor XII OS=Rattus norvegicus OX=10116 GN=F12 PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"637.02887"	"1909.07206"	"1909.07044"	"0.85"	"0.00054"	"7/158"	"7"	"158"	"622121.312133789"	"HCD"	"MS2"	"64.29577"	"24.8"	"100.000"	"85.0961"	"29553"	"29553"	"29527"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"39.8"	""	"28.3"	""	"34.0"	""	"43.8"	""	"44.7"	"46.3"	""	"942"	"6"	"36.000"	"29.000"	"12.6188828098976"	"14"	"0.0001991"	"0.002885"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFDEMLPGTHFQR"	"[R].tSFDEmLPGTHFQR.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"637.64667"	"1910.92545"	"1910.92681"	"-0.71"	"-0.00045"	"15/124"	"15"	"124"	"1387131.96179199"	"HCD"	"MS2"	"4.136266"	"20.5"	"100.000"	"72.3752"	"24401"	"24401"	"24384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.3"	""	"22.3"	""	"26.1"	""	"41.7"	""	"41.2"	"42.2"	""	"766"	"56"	"35.000"	"28.000"	"0.000106463018155181"	"21"	"0"	"3.903E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSFDEMLPGTHFQR"	"[R].tSFDEmLPGTHFQR.[V]"	"N-Term(TMT6plex); M6(Oxidation)"	"1"	"1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"Q5XI78"	"2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Ogdh PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"637.64709"	"1910.92673"	"1910.92681"	"-0.04"	"-0.00003"	"14/124"	"14"	"124"	"1446891.43365479"	"HCD"	"MS2"	"0.9115643"	"20.8"	"100.000"	"72.5391"	"24496"	"24496"	"24478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"23.1"	""	"26.8"	""	"47.0"	""	"37.7"	"40.7"	""	"782"	"46"	"35.000"	"28.000"	"0.000995810628760752"	"27"	"0"	"9.264E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTGPNSPDTANDGFVR"	"[K].hTGPNSPDTANDGFVR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"638.64703"	"1913.92655"	"1913.93032"	"-1.97"	"-0.00126"	"10/162"	"10"	"162"	"976290.369262695"	"HCD"	"MS2"	"0"	"42.5"	"100.000"	"33.2345"	"8558"	"8558"	"8532"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"72.7"	""	"49.6"	""	"53.3"	""	"76.4"	"1.4"	"74.7"	"74.2"	""	"748"	"35"	"35.000"	"28.000"	"0.0106382845418552"	"15"	"0"	"5.746E-05"	"0.703"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HTGPNSPDTANDGFVR"	"[K].hTGPNSPDTANDGFVR.[L]"	"N-Term(TMT6plex)"	"2"	"2"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2;Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"Q8VHV7; Q6AY09"	"Heterogeneous nuclear ribonucleoprotein H OS=Rattus norvegicus OX=10116 GN=Hnrnph1 PE=1 SV=2; Heterogeneous nuclear ribonucleoprotein H2 OS=Rattus norvegicus OX=10116 GN=Hnrnph2 PE=1 SV=1"	"0"	"3"	"3"	"0.9841"	"0.0000"	"1"	"1"	"1"	"638.64825"	"1913.93021"	"1913.93032"	"-0.06"	"-0.00004"	"10/162"	"10"	"162"	"1118548.13134766"	"HCD"	"MS2"	"5.823347"	"31.0"	"100.000"	"33.4254"	"8598"	"8598"	"8572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.2"	""	"40.2"	""	"36.9"	""	"57.4"	""	"51.4"	"61.5"	""	"774"	"63"	"35.000"	"28.000"	"2.14640150914711E-05"	"17"	"0"	"1.903E-07"	"1.214"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAPLPESEVALGK"	"[K].dMAPLPESEVALGk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.8182"	"0.0000"	"1"	"1"	"1"	"639.02521"	"1915.06107"	"1915.06107"	"0.00"	"0.00000"	"7/120"	"7"	"120"	"723827.824768066"	"HCD"	"MS2"	"38.31313"	"17.7"	"100.000"	"104.7253"	"37488"	"37488"	"37477"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"19.1"	""	"21.5"	""	"26.9"	""	"38.5"	"43.5"	""	"1084"	"11"	"37.000"	"30.000"	"4.18792877121871"	"15"	"0.0001991"	"0.002552"	"0.364"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DMAPLPESEVALGK"	"[K].dMAPLPESEVALGk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"639.02533"	"1915.06144"	"1915.06107"	"0.19"	"0.00012"	"9/120"	"9"	"120"	"830424.511047363"	"HCD"	"MS2"	"46.464"	"22.1"	"100.000"	"104.4900"	"37375"	"37375"	"37363"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"19.3"	""	"28.9"	""	"39.4"	""	"43.4"	"55.2"	""	"1094"	"15"	"37.000"	"30.000"	"1.57031697836751"	"14"	"9.9E-05"	"0.00092"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QVLLSEPQEAAALYR"	"[R].qVLLSEPQEAAALYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"2"	"2"	"0.8462"	"0.0000"	"1"	"1"	"1"	"959.03625"	"1917.06523"	"1917.06429"	"0.49"	"0.00047"	"4/148"	"4"	"148"	"56989.4138183594"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"105.0080"	"37599"	"37599"	"37579"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.3"	""	""	""	""	""	"4.4"	""	"2.1"	"2.9"	""	"1137"	"13"	"37.000"	"30.000"	"3.03200888084713"	"15"	"0.0005161"	"0.006677"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VRPSEEMIELEK"	"[K].vRPSEEMIELEk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"0.3000"	"0.0000"	"1"	"1"	"1"	"640.02875"	"1918.07169"	"1918.07197"	"-0.15"	"-0.00009"	"13/122"	"13"	"122"	"749672.091003418"	"HCD"	"MS2"	"5.67491"	"37.0"	"100.000"	"82.3651"	"28454"	"28454"	"28432"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.2"	""	"37.2"	""	"32.9"	""	"50.0"	""	"94.7"	"106.2"	""	"1153"	"10"	"37.000"	"30.000"	"5.98135131719084"	"20"	"0.0001991"	"0.005643"	"0.293"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VRPSEEMIELEK"	"[K].vRPSEEMIELEk.[E]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"Q5U301"	"A-kinase anchor protein 2 OS=Rattus norvegicus OX=10116 GN=Akap2 PE=1 SV=1"	"0"	"3"	"3"	"0.2778"	"0.0000"	"1"	"1"	"1"	"640.02881"	"1918.07187"	"1918.07197"	"-0.05"	"-0.00003"	"8/122"	"8"	"122"	"618367.461364746"	"HCD"	"MS2"	"29.95616"	"30.1"	"100.000"	"82.3397"	"28472"	"28472"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"24.3"	""	"29.8"	""	"47.0"	""	"81.1"	"78.0"	""	"1151"	"18"	"37.000"	"30.000"	"0.990935364904448"	"27"	"0.0001991"	"0.005128"	"0.302"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDNGKPYVLPSVR"	"[R].dDnGkPYVLPSVR.[K]"	"N-Term(TMT6plex); N3(Deamidated); K5(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"640.35785"	"1919.05899"	"1919.06385"	"-2.53"	"-0.00162"	"10/136"	"10"	"136"	"589827.096801758"	"HCD"	"MS2"	"21.73254"	"33.7"	"100.000"	"76.4402"	"26052"	"26052"	"26032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.3"	""	"28.0"	""	"36.3"	""	"58.5"	""	"75.9"	"65.0"	""	"1159"	"4"	"37.000"	"30.000"	"25.7663819498348"	"13"	"0.002673"	"0.02809"	"0.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DDNGKPYVLPSVR"	"[R].dDnGkPYVLPSVR.[K]"	"N-Term(TMT6plex); N3(Deamidated); K5(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"640.35815"	"1919.05991"	"1919.06385"	"-2.05"	"-0.00131"	"6/136"	"6"	"136"	"721827.609680176"	"HCD"	"MS2"	"11.77225"	"39.8"	"100.000"	"76.5148"	"26114"	"26114"	"26090"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.5"	""	"42.5"	""	"39.8"	""	"67.6"	"0.2"	"84.4"	"89.5"	""	"1156"	"11"	"37.000"	"30.000"	"4.62304199394062"	"14"	"0.0007633"	"0.00735"	"0.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLTFPDDNDISK"	"[K].nSLTFPDDNDISk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"642.00677"	"1924.00577"	"1924.00639"	"-0.32"	"-0.00021"	"10/140"	"10"	"140"	"506113.188476563"	"HCD"	"MS2"	"7.26166"	"19.3"	"100.000"	"95.1781"	"33612"	"33612"	"33592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.1"	""	"19.0"	""	"19.0"	""	"35.4"	"2.2"	"38.6"	"39.0"	""	"1278"	"16"	"38.000"	"31.000"	"1.75995214143309"	"16"	"0.0001991"	"0.004901"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSLTFPDDNDISK"	"[K].nSLTFPDDNDISk.[E]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"Q63644"	"Rho-associated protein kinase 1 OS=Rattus norvegicus OX=10116 GN=Rock1 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"642.00726"	"1924.00724"	"1924.00639"	"0.44"	"0.00028"	"8/140"	"8"	"140"	"357889.874206543"	"HCD"	"MS2"	"6.784273"	"15.0"	"100.000"	"95.2283"	"33666"	"33666"	"33639"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"18.1"	""	"17.4"	""	"28.3"	""	"30.8"	"33.5"	""	"1288"	"17"	"38.000"	"31.000"	"1.19367436547914"	"18"	"0.0001686"	"0.001491"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAQPGSFEYEYAMR"	"[R].fAQPGSFEYEYAMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"962.95813"	"1924.90898"	"1924.91010"	"-0.58"	"-0.00056"	"5/134"	"5"	"134"	"94168.2375488281"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"106.9622"	"38375"	"38375"	"38356"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.1"	""	"3.5"	""	"3.5"	""	"5.7"	""	"5.4"	"4.6"	""	"651"	"1"	"35.000"	"28.000"	"28.21960905593"	"13"	"0.00674"	"0.08362"	"0.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAQPGSFEYEYAMR"	"[R].fAQPGSFEYEYAMR.[W]"	"N-Term(TMT6plex)"	"1"	"1"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"Q5FVM4"	"Non-POU domain-containing octamer-binding protein OS=Rattus norvegicus OX=10116 GN=Nono PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"962.95837"	"1924.90947"	"1924.91010"	"-0.33"	"-0.00031"	"5/134"	"5"	"134"	"67585.4413452148"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"106.6581"	"38236"	"38236"	"38211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.2"	""	"2.0"	""	"2.4"	""	"4.7"	""	"6.7"	"9.7"	""	"643"	"7"	"35.000"	"28.000"	"6.12605620825184"	"13"	"0.002084"	"0.01884"	"0.184"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFEGFPTDSNFELR"	"[K].hFEGFPTDSNFELR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"642.31769"	"1924.93851"	"1924.93909"	"-0.30"	"-0.00019"	"10/130"	"10"	"130"	"653428.920349121"	"HCD"	"MS2"	"24.51805"	"12.7"	"100.000"	"99.2968"	"35307"	"35307"	"35292"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"20.0"	""	"14.9"	""	"20.6"	""	"23.4"	"23.2"	""	"851"	"35"	"36.000"	"29.000"	"0.0120475729421264"	"16"	"0"	"3.293E-05"	"0.753"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HFEGFPTDSNFELR"	"[K].hFEGFPTDSNFELR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"P97584"	"Prostaglandin reductase 1 OS=Rattus norvegicus OX=10116 GN=Ptgr1 PE=2 SV=3"	"0"	"3"	"3"	"0.8409"	"0.0000"	"1"	"1"	"1"	"642.31799"	"1924.93943"	"1924.93909"	"0.17"	"0.00011"	"13/130"	"13"	"130"	"643228.031311035"	"HCD"	"MS2"	"6.241137"	"12.0"	"100.000"	"99.2539"	"35261"	"35261"	"35241"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.8"	""	"15.1"	""	"16.9"	""	"18.4"	"1.8"	"17.4"	"22.4"	""	"857"	"44"	"36.000"	"29.000"	"0.00189212936690894"	"22"	"0"	"1.382E-05"	"0.831"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPEIYTEPEVFK"	"[K].dPEIYTEPEVFk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.34808"	"1925.02970"	"1925.03082"	"-0.58"	"-0.00037"	"11/104"	"11"	"104"	"381815.472412109"	"HCD"	"MS2"	"16.36691"	"14.8"	"100.000"	"106.5992"	"38230"	"38230"	"38217"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.0"	""	"12.8"	""	"17.0"	""	"21.9"	"0.8"	"34.5"	"36.2"	""	"1191"	"21"	"37.000"	"30.000"	"0.47193454230112"	"14"	"0.00307"	"0.03374"	"0.131"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPEIYTEPEVFK"	"[K].dPEIYTEPEVFk.[Y]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"Q62969"	"Prostacyclin synthase OS=Rattus norvegicus OX=10116 GN=Ptgis PE=2 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"642.34918"	"1925.03299"	"1925.03082"	"1.13"	"0.00073"	"12/104"	"12"	"104"	"396120.206726074"	"HCD"	"MS2"	"20.45121"	"14.8"	"100.000"	"106.3235"	"38102"	"38102"	"38094"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"13.5"	""	"15.3"	""	"23.8"	""	"37.9"	"34.4"	""	"1167"	"29"	"37.000"	"30.000"	"0.0673039975938608"	"17"	"0.0003938"	"0.006261"	"0.284"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATPQQAQEVHEK"	"[K].tATPQQAQEVHEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"642.35388"	"1925.04709"	"1925.04926"	"-1.13"	"-0.00072"	"12/134"	"12"	"134"	"599900.938354492"	"HCD"	"MS2"	"33.02763"	"25.1"	"100.000"	"30.8794"	"7573"	"7573"	"7559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.1"	""	"25.8"	""	"28.5"	""	"42.4"	""	"48.2"	"55.4"	""	"1112"	"45"	"37.000"	"30.000"	"0.00181582834687819"	"20"	"0"	"6.031E-05"	"0.699"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TATPQQAQEVHEK"	"[K].tATPQQAQEVHEk.[L]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"P48500"	"Triosephosphate isomerase OS=Rattus norvegicus OX=10116 GN=Tpi1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"642.35529"	"1925.05130"	"1925.04926"	"1.06"	"0.00068"	"12/134"	"12"	"134"	"456868.975341797"	"HCD"	"MS2"	"40.03186"	"19.7"	"100.000"	"30.7319"	"7552"	"7552"	"7534"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.2"	"1.9"	"14.5"	""	"22.0"	""	"37.4"	""	"44.6"	"41.3"	""	"1068"	"30"	"37.000"	"30.000"	"0.0502969044543197"	"14"	"0"	"1.527E-05"	"0.822"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDIPHMDIEALK"	"[K].aVDIPHmDIEALk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"642.69696"	"1926.07633"	"1926.07706"	"-0.38"	"-0.00024"	"12/110"	"12"	"110"	"552268.034790039"	"HCD"	"MS2"	"30.19697"	"22.2"	"100.000"	"94.9244"	"33509"	"33509"	"33490"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"22.3"	""	"21.8"	""	"50.9"	""	"49.0"	"45.2"	""	"997"	"29"	"36.000"	"29.000"	"0.0618963675334817"	"17"	"0"	"0.0001312"	"0.63"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AVDIPHMDIEALK"	"[K].aVDIPHmDIEALk.[K]"	"N-Term(TMT6plex); M7(Oxidation); K13(TMT6plex)"	"1"	"1"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"P62907"	"60S ribosomal protein L10a OS=Rattus norvegicus OX=10116 GN=Rpl10a PE=1 SV=2"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"642.69733"	"1926.07743"	"1926.07706"	"0.19"	"0.00012"	"13/110"	"13"	"110"	"606117.124816895"	"HCD"	"MS2"	"20.23042"	"23.7"	"100.000"	"94.9446"	"33550"	"33550"	"33536"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.5"	""	"20.1"	""	"22.8"	""	"59.7"	""	"46.7"	"51.2"	""	"1008"	"44"	"37.000"	"30.000"	"0.00211071956819431"	"18"	"0"	"3.68E-05"	"0.743"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELVANNVTLPAGEQR"	"[K].sELVANNVTLPAGEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"964.02557"	"1927.04387"	"1927.04462"	"-0.39"	"-0.00037"	"3/166"	"3"	"166"	"72104.1582641602"	"HCD"	"MS2"	"0"	"0.9"	"100.000"	"79.3887"	"27273"	"27273"	"27244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.5"	""	"2.2"	""	""	""	""	""	""	"3.9"	""	"1134"	"0"	"37.000"	"30.000"	"52.6723941304224"	"13"	"0.004852"	"0.05995"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELVANNVTLPAGEQR"	"[K].sELVANNVTLPAGEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"643.02002"	"1927.04551"	"1927.04462"	"0.46"	"0.00030"	"11/166"	"11"	"166"	"557576.862304688"	"HCD"	"MS2"	"0"	"10.1"	"100.000"	"79.2299"	"27181"	"27181"	"27160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"12.5"	""	"11.7"	""	"19.9"	""	"22.5"	"20.4"	""	"1131"	"45"	"37.000"	"30.000"	"0.00177187307710046"	"20"	"0"	"1.852E-05"	"0.804"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SELVANNVTLPAGEQR"	"[K].sELVANNVTLPAGEQR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"Q62733"	"Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus OX=10116 GN=Tmpo PE=1 SV=3"	"0"	"3"	"3"	"0.9275"	"0.0000"	"1"	"1"	"1"	"643.02020"	"1927.04605"	"1927.04462"	"0.74"	"0.00048"	"13/166"	"13"	"166"	"552058.487365723"	"HCD"	"MS2"	"6.091346"	"10.4"	"100.000"	"79.3291"	"27248"	"27248"	"27228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.2"	""	"12.3"	""	"13.4"	""	"19.1"	""	"19.6"	"20.1"	""	"1135"	"69"	"37.000"	"30.000"	"6.93371307143565E-06"	"22"	"0"	"2.281E-07"	"1.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAPPTEEETVPGK"	"[K].nTAPPTEEETVPGk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"0.8261"	"0.0000"	"1"	"1"	"1"	"643.34967"	"1928.03446"	"1928.03769"	"-1.68"	"-0.00108"	"8/146"	"8"	"146"	"637573.827148438"	"HCD"	"MS2"	"54.63456"	"29.0"	"100.000"	"52.2637"	"16271"	"16271"	"16246"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"31.1"	""	"34.4"	""	"57.8"	""	"60.9"	"58.7"	""	"1160"	"23"	"37.000"	"30.000"	"0.287361110666778"	"18"	"9.9E-05"	"0.0007239"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTAPPTEEETVPGK"	"[K].nTAPPTEEETVPGk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"Q5M7W5"	"Microtubule-associated protein 4 OS=Rattus norvegicus OX=10116 GN=Map4 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"643.35028"	"1928.03629"	"1928.03769"	"-0.73"	"-0.00047"	"12/146"	"12"	"146"	"551386.235778809"	"HCD"	"MS2"	"32.24283"	"25.4"	"100.000"	"52.6066"	"16377"	"16377"	"16355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"28.2"	""	"31.3"	""	"50.8"	""	"55.5"	"50.4"	""	"1155"	"12"	"37.000"	"30.000"	"3.46379346537557"	"13"	"9.9E-05"	"0.0006404"	"0.488"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEILPTTPISEQK"	"[K].dEILPTTPISEQk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"965.04895"	"1929.09062"	"1929.09448"	"-2.00"	"-0.00193"	"9/118"	"9"	"118"	"150296.394165039"	"HCD"	"MS2"	"58.15236"	"7.8"	"100.000"	"97.4511"	"34532"	"34532"	"34510"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.1"	""	"9.4"	""	"8.3"	""	"14.3"	""	"15.0"	"11.2"	""	"986"	"11"	"36.000"	"29.000"	"3.7743912720725"	"13"	"0.0001991"	"0.004119"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEILPTTPISEQK"	"[K].dEILPTTPISEQk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"965.04974"	"1929.09221"	"1929.09448"	"-1.18"	"-0.00113"	"7/118"	"7"	"118"	"118300.438293457"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"97.5298"	"34595"	"34595"	"34573"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"7.8"	""	"7.1"	""	"10.3"	""	"16.5"	"6.4"	""	"974"	"24"	"36.000"	"29.000"	"0.17681901267304"	"22"	"9.9E-05"	"0.0007929"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEILPTTPISEQK"	"[K].dEILPTTPISEQk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"643.70245"	"1929.09281"	"1929.09448"	"-0.87"	"-0.00056"	"6/118"	"6"	"118"	"491592.757995605"	"HCD"	"MS2"	"17.65427"	"18.3"	"100.000"	"97.7122"	"34638"	"34638"	"34615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.0"	""	"22.2"	""	"28.0"	""	"33.0"	""	"32.9"	"31.4"	""	"963"	"21"	"36.000"	"29.000"	"0.348815914776108"	"18"	"0.0001991"	"0.002735"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEILPTTPISEQK"	"[K].dEILPTTPISEQk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"643.70288"	"1929.09409"	"1929.09448"	"-0.20"	"-0.00013"	"12/118"	"12"	"118"	"727223.679138184"	"HCD"	"MS2"	"69.41136"	"18.9"	"100.000"	"97.4606"	"34567"	"34567"	"34544"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.4"	""	"23.1"	""	"26.1"	""	"31.4"	""	"39.4"	"29.4"	""	"951"	"26"	"36.000"	"29.000"	"0.112240739987736"	"17"	"0"	"5.244E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEILPTTPISEQK"	"[K].dEILPTTPISEQk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.6522"	"0.0000"	"1"	"1"	"1"	"643.70300"	"1929.09446"	"1929.09448"	"-0.01"	"-0.00001"	"11/118"	"11"	"118"	"815044.458984375"	"HCD"	"MS2"	"33.53179"	"20.9"	"100.000"	"97.4119"	"34516"	"34516"	"34497"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"26.6"	""	"29.6"	""	"32.6"	""	"40.6"	"40.0"	""	"952"	"23"	"36.000"	"29.000"	"0.254452635072959"	"22"	"0"	"0.0002471"	"0.573"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DEILPTTPISEQK"	"[K].dEILPTTPISEQk.[G]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"P62909"	"40S ribosomal protein S3 OS=Rattus norvegicus OX=10116 GN=Rps3 PE=1 SV=1"	"0"	"3"	"3"	"0.5417"	"0.0000"	"1"	"1"	"1"	"643.70331"	"1929.09537"	"1929.09448"	"0.46"	"0.00030"	"11/118"	"11"	"118"	"378367.33026123"	"HCD"	"MS2"	"33.27333"	"15.9"	"100.000"	"97.7908"	"34701"	"34701"	"34679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.9"	""	"16.8"	""	"23.7"	""	"28.4"	"1.3"	"31.3"	"27.8"	""	"951"	"24"	"36.000"	"29.000"	"0.200978926083294"	"25"	"0"	"0.0003583"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYSVVFPHDEPLAGR"	"[K].nYSVVFPHDEPLAGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"644.00525"	"1930.00119"	"1930.00203"	"-0.43"	"-0.00028"	"14/154"	"14"	"154"	"365515.403808594"	"HCD"	"MS2"	"8.41862"	"9.8"	"100.000"	"87.9846"	"30747"	"30747"	"30726"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"12.4"	""	"12.1"	""	"16.6"	""	"21.7"	"18.2"	""	"1060"	"26"	"37.000"	"30.000"	"0.121976416322651"	"17"	"0"	"6.77E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYSVVFPHDEPLAGR"	"[K].nYSVVFPHDEPLAGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.00531"	"1930.00138"	"1930.00203"	"-0.34"	"-0.00022"	"13/154"	"13"	"154"	"372452.605285645"	"HCD"	"MS2"	"4.791147"	"9.0"	"100.000"	"88.3822"	"30869"	"30869"	"30855"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.3"	""	"12.5"	""	"13.3"	""	"10.1"	""	"17.6"	"21.1"	""	"1061"	"26"	"37.000"	"30.000"	"0.132949095873354"	"14"	"0"	"2.692E-05"	"0.771"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYSVVFPHDEPLAGR"	"[K].nYSVVFPHDEPLAGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"644.00537"	"1930.00156"	"1930.00203"	"-0.24"	"-0.00016"	"12/154"	"12"	"154"	"352975.534301758"	"HCD"	"MS2"	"17.86232"	"9.0"	"100.000"	"88.0780"	"30747"	"30747"	"30730"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"12.3"	""	"13.4"	""	"11.5"	""	"18.6"	"20.1"	""	"1060"	"48"	"37.000"	"30.000"	"0.000800342481706999"	"20"	"0"	"2.094E-06"	"0.999"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYSVVFPHDEPLAGR"	"[K].nYSVVFPHDEPLAGR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"Q64380"	"Sarcosine dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sardh PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"644.00580"	"1930.00284"	"1930.00203"	"0.42"	"0.00027"	"11/154"	"11"	"154"	"296283.630615234"	"HCD"	"MS2"	"11.68633"	"8.6"	"100.000"	"88.2771"	"30866"	"30866"	"30847"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.8"	""	"13.9"	""	"11.1"	""	"9.6"	""	"14.8"	"18.4"	""	"1051"	"26"	"37.000"	"30.000"	"0.135385676800485"	"14"	"0"	"7.123E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADPSYLPTQQDVLR"	"[R].vADPSYLPTQQDVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.02368"	"1931.04009"	"1931.04356"	"-1.80"	"-0.00174"	"3/140"	"3"	"140"	"121229.996459961"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"100.1992"	"35646"	"35646"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.3"	""	"9.5"	""	"9.0"	""	"11.8"	""	"15.5"	"11.9"	""	"1187"	"1"	"37.000"	"30.000"	"43.8955730747064"	"13"	"0.006267"	"0.07705"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADPSYLPTQQDVLR"	"[R].vADPSYLPTQQDVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.02454"	"1931.04180"	"1931.04356"	"-0.91"	"-0.00088"	"9/140"	"9"	"140"	"141378.362243652"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"100.3549"	"35737"	"35737"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.0"	""	"5.2"	""	"7.4"	""	"6.4"	""	"17.6"	"13.0"	""	"1170"	"15"	"37.000"	"30.000"	"2.02841057514731"	"13"	"0.0001991"	"0.005309"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADPSYLPTQQDVLR"	"[R].vADPSYLPTQQDVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"644.35284"	"1931.04398"	"1931.04356"	"0.22"	"0.00014"	"15/140"	"15"	"140"	"997098.506164551"	"HCD"	"MS2"	"42.94994"	"21.6"	"100.000"	"100.3250"	"35724"	"35724"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.9"	""	"26.6"	""	"22.8"	""	"38.6"	""	"45.6"	"46.8"	""	"1189"	"30"	"37.000"	"30.000"	"0.0543440322054064"	"17"	"0"	"7.252E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VADPSYLPTQQDVLR"	"[R].vADPSYLPTQQDVLR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"P82471"	"Guanine nucleotide-binding protein G(q) subunit alpha OS=Rattus norvegicus OX=10116 GN=Gnaq PE=2 SV=2"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"644.35297"	"1931.04435"	"1931.04356"	"0.41"	"0.00026"	"13/140"	"13"	"140"	"1128161.60198975"	"HCD"	"MS2"	"36.45441"	"22.2"	"100.000"	"100.2479"	"35665"	"35665"	"35649"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.3"	""	"25.6"	""	"27.7"	""	"44.8"	""	"41.5"	"48.2"	""	"1182"	"35"	"37.000"	"30.000"	"0.0192569490292187"	"17"	"0"	"4.091E-06"	"0.939"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFATPEATEVAPNK"	"[R].vFATPEATEVAPNk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"644.69897"	"1932.08237"	"1932.08425"	"-0.97"	"-0.00063"	"15/116"	"15"	"116"	"1971796.74511719"	"HCD"	"MS2"	"39.35676"	"45.5"	"100.000"	"92.8939"	"32686"	"32686"	"32669"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.0"	""	"51.9"	""	"56.4"	""	"76.0"	"0.3"	"101.5"	"96.8"	""	"1142"	"45"	"37.000"	"30.000"	"0.00195720406118023"	"24"	"0"	"1.327E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFATPEATEVAPNK"	"[R].vFATPEATEVAPNk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"966.54553"	"1932.08379"	"1932.08425"	"-0.24"	"-0.00023"	"5/116"	"5"	"116"	"90008.3383178711"	"HCD"	"MS2"	"100"	"4.3"	"100.000"	"92.7680"	"32677"	"32677"	"32648"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.3"	""	"5.6"	""	"7.5"	""	"7.0"	""	"10.6"	"6.4"	""	"1123"	"4"	"37.000"	"30.000"	"23.032960382698"	"13"	"0.004213"	"0.04568"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFATPEATEVAPNK"	"[R].vFATPEATEVAPNk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"3"	"3"	"0.7561"	"0.0000"	"1"	"1"	"1"	"644.69946"	"1932.08384"	"1932.08425"	"-0.21"	"-0.00014"	"13/116"	"13"	"116"	"1606476.5067749"	"HCD"	"MS2"	"6.047945"	"41.7"	"100.000"	"92.8118"	"32694"	"32694"	"32679"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.5"	""	"45.6"	""	"42.0"	""	"72.3"	"0.8"	"92.2"	"102.4"	""	"1122"	"41"	"37.000"	"30.000"	"0.00478589163963868"	"25"	"0"	"4.104E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFATPEATEVAPNK"	"[R].vFATPEATEVAPNk.[G]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"Q9ESS6"	"Basal cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Bcam PE=2 SV=1"	"0"	"2"	"2"	"0.9615"	"0.0000"	"1"	"1"	"1"	"966.54578"	"1932.08428"	"1932.08425"	"0.01"	"0.00001"	"9/116"	"9"	"116"	"83451.9467773438"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"92.8432"	"32666"	"32666"	"32637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.4"	""	"3.1"	""	"2.9"	""	"4.1"	""	"7.6"	"6.6"	""	"1135"	"26"	"37.000"	"30.000"	"0.139947732388049"	"15"	"0.0001686"	"0.001537"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPYDENWFYTR"	"[K].eLAPYDENWFYTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8000"	"0.0000"	"1"	"1"	"1"	"966.96942"	"1932.93157"	"1932.93294"	"-0.71"	"-0.00069"	"4/128"	"4"	"128"	"121011.738464355"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"111.8648"	"40279"	"40279"	"40252"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.7"	""	"8.8"	""	"8.0"	""	"7.2"	""	"7.9"	"6.7"	""	"718"	"20"	"35.000"	"28.000"	"0.3381383651517"	"17"	"0.0008247"	"0.007545"	"0.267"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELAPYDENWFYTR"	"[K].eLAPYDENWFYTR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"P17074"	"40S ribosomal protein S19 OS=Rattus norvegicus OX=10116 GN=Rps19 PE=2 SV=3"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"966.96973"	"1932.93218"	"1932.93294"	"-0.40"	"-0.00038"	"9/128"	"9"	"128"	"147791.768127441"	"HCD"	"MS2"	"0"	"6.6"	"100.000"	"111.7929"	"40236"	"40236"	"40215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"10.0"	""	"9.7"	""	"10.1"	""	"11.3"	"8.5"	""	"713"	"22"	"35.000"	"28.000"	"0.241023580727242"	"18"	"0.0001991"	"0.002591"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEEMETVIPVDIMR"	"[K].gAEEMETVIPVDImR.[R]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"O88767"	"Protein/nucleic acid deglycase DJ-1 OS=Rattus norvegicus OX=10116 GN=Park7 PE=1 SV=1"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"645.66364"	"1934.97635"	"1934.97647"	"-0.06"	"-0.00004"	"5/130"	"5"	"130"	"145216.239990234"	"HCD"	"MS2"	"19.43148"	"5.1"	"100.000"	"107.4104"	"38530"	"38530"	"38518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.5"	""	"7.0"	""	"8.2"	""	"6.8"	""	"11.2"	"10.8"	""	"978"	"5"	"36.000"	"29.000"	"13.8136630773378"	"14"	"0.003001"	"0.03248"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.8696"	"0.0000"	"1"	"1"	"1"	"645.67480"	"1935.00986"	"1935.01114"	"-0.66"	"-0.00043"	"9/124"	"9"	"124"	"598359.941589355"	"HCD"	"MS2"	"0"	"20.8"	"100.000"	"80.7207"	"27787"	"27787"	"27766"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"24.2"	""	"27.6"	""	"38.4"	""	"38.4"	"36.7"	""	"1144"	"23"	"37.000"	"30.000"	"0.275040107313245"	"17"	"0.0001686"	"0.001961"	"0.388"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"968.00922"	"1935.01116"	"1935.01114"	"0.01"	"0.00001"	"6/124"	"6"	"124"	"92918.7243652344"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"80.7781"	"27838"	"27838"	"27811"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"5.4"	""	"4.4"	""	"10.6"	""	"9.3"	"10.3"	""	"1167"	"8"	"37.000"	"30.000"	"8.53180381295495"	"13"	"0.002875"	"0.03115"	"0.138"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"645.67535"	"1935.01151"	"1935.01114"	"0.19"	"0.00012"	"13/124"	"13"	"124"	"604076.058410645"	"HCD"	"MS2"	"11.35881"	"22.5"	"100.000"	"80.8173"	"27854"	"27854"	"27827"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.4"	""	"21.6"	""	"26.7"	""	"36.8"	""	"43.2"	"45.0"	""	"1169"	"20"	"37.000"	"30.000"	"0.635015777004175"	"16"	"9.9E-05"	"0.0006307"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"968.00970"	"1935.01213"	"1935.01114"	"0.51"	"0.00049"	"5/124"	"5"	"124"	"67001.3248901367"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"80.9905"	"27897"	"27897"	"27875"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.1"	""	"2.9"	""	"7.5"	""	"7.4"	""	"5.0"	"8.3"	""	"1163"	"7"	"37.000"	"30.000"	"12.8100173826559"	"13"	"0.004213"	"0.04569"	"0.103"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VSPDGEEGYPGELK"	"[R].vSPDGEEGYPGELk.[V]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"Q66HG4"	"Aldose 1-epimerase OS=Rattus norvegicus OX=10116 GN=Galm PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"968.00977"	"1935.01225"	"1935.01114"	"0.57"	"0.00056"	"6/124"	"6"	"124"	"73405.2908935547"	"HCD"	"MS2"	"0"	"5.1"	"100.000"	"80.6583"	"27762"	"27762"	"27736"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"4.9"	""	"4.4"	""	"8.2"	""	"8.1"	"10.6"	""	"1180"	"12"	"37.000"	"30.000"	"3.67157168249804"	"14"	"0.003117"	"0.03439"	"0.129"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"645.71478"	"1935.12979"	"1935.13153"	"-0.90"	"-0.00058"	"14/132"	"14"	"132"	"7261872.41107178"	"HCD"	"MS2"	"12.55805"	"240.2"	"100.000"	"68.7260"	"22921"	"22921"	"22909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"439.7"	""	"307.8"	""	"284.5"	""	"490.2"	"0.0"	"378.7"	"368.7"	""	"822"	"16"	"36.000"	"29.000"	"0.945892586954897"	"15"	"0"	"6.755E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"645.71484"	"1935.12998"	"1935.13153"	"-0.80"	"-0.00052"	"15/132"	"15"	"132"	"2837044.49780273"	"HCD"	"MS2"	"11.33712"	"112.9"	"100.000"	"69.0438"	"23049"	"23049"	"23032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"202.9"	""	"147.4"	""	"142.4"	""	"207.7"	""	"192.7"	"181.0"	""	"818"	"13"	"36.000"	"29.000"	"1.99858814971219"	"14"	"0"	"0.0003925"	"0.532"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"645.71497"	"1935.13034"	"1935.13153"	"-0.61"	"-0.00040"	"10/132"	"10"	"132"	"6291054.46136475"	"HCD"	"MS2"	"6.781549"	"218.1"	"100.000"	"68.5773"	"22893"	"22893"	"22874"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"417.8"	""	"288.0"	""	"265.9"	""	"439.7"	""	"326.5"	"323.3"	""	"818"	"21"	"36.000"	"29.000"	"0.363683257203901"	"18"	"0"	"0.0003053"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"645.71509"	"1935.13071"	"1935.13153"	"-0.43"	"-0.00027"	"9/132"	"9"	"132"	"5265166.59613037"	"HCD"	"MS2"	"0.8795786"	"195.9"	"100.000"	"68.9554"	"23047"	"23047"	"23029"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"371.2"	""	"264.0"	""	"229.9"	""	"368.5"	""	"316.7"	"302.7"	""	"811"	"12"	"36.000"	"29.000"	"2.87072015567768"	"13"	"0.001049"	"0.008854"	"0.253"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPPPKDPVIETIR"	"[K].dPPPkDPVIETIR.[N]"	"N-Term(TMT6plex); K5(TMT6plex)"	"2"	"2"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"1"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"645.71545"	"1935.13181"	"1935.13153"	"0.14"	"0.00009"	"10/132"	"10"	"132"	"5879271.88415527"	"HCD"	"MS2"	"7.905852"	"198.3"	"100.000"	"68.4240"	"22798"	"22798"	"22780"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"387.3"	""	"248.4"	""	"240.8"	""	"405.5"	"2.8"	"299.8"	"287.5"	""	"821"	"19"	"36.000"	"29.000"	"0.470233062463392"	"15"	"9.9E-05"	"0.0005791"	"0.497"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPDGHYVDVVR"	"[R].kPPPDGHYVDVVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.02936"	"1937.09560"	"1937.10090"	"-2.74"	"-0.00133"	"8/130"	"8"	"130"	"10549666.682251"	"HCD"	"MS2"	"20.21497"	"224.9"	"100.000"	"44.8105"	"13215"	"13215"	"13195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"350.6"	""	"310.0"	"2.6"	"324.5"	""	"334.2"	"5.4"	"401.7"	"400.6"	""	"944"	"38"	"36.000"	"29.000"	"0.00779725968764095"	"15"	"0"	"0.0002103"	"0.587"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPDGHYVDVVR"	"[R].kPPPDGHYVDVVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.02942"	"1937.09585"	"1937.10090"	"-2.61"	"-0.00126"	"8/130"	"8"	"130"	"10472237.5144043"	"HCD"	"MS2"	"40.03242"	"259.5"	"100.000"	"44.5727"	"13152"	"13152"	"13141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"394.2"	""	"354.6"	""	"343.9"	""	"418.3"	""	"475.0"	"475.5"	""	"958"	"18"	"36.000"	"29.000"	"0.800452404254829"	"14"	"0.0001991"	"0.005852"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPDGHYVDVVR"	"[R].kPPPDGHYVDVVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.03021"	"1937.09902"	"1937.10090"	"-0.97"	"-0.00047"	"10/130"	"10"	"130"	"11081273.597229"	"HCD"	"MS2"	"4.75219"	"175.3"	"100.000"	"44.2791"	"13035"	"13035"	"13014"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"280.5"	""	"245.5"	""	"264.9"	""	"269.5"	""	"297.7"	"299.9"	""	"931"	"51"	"36.000"	"29.000"	"0.000352305712632264"	"16"	"0"	"4.076E-05"	"0.734"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KPPPDGHYVDVVR"	"[R].kPPPDGHYVDVVR.[T]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"P14942"	"Glutathione S-transferase alpha-4 OS=Rattus norvegicus OX=10116 GN=Gsta4 PE=1 SV=2"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"485.03073"	"1937.10109"	"1937.10090"	"0.10"	"0.00005"	"9/130"	"9"	"130"	"9292164.64367676"	"HCD"	"MS2"	"0"	"171.9"	"100.000"	"44.5034"	"13091"	"13091"	"13072"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"272.6"	""	"258.6"	""	"257.5"	""	"249.3"	""	"288.4"	"301.0"	""	"928"	"41"	"36.000"	"29.000"	"0.00343176847627022"	"15"	"0"	"0.0001449"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MGAVFMDAPVSGGVGAAR"	"[K].mGAVFMDAPVSGGVGAAR.[S]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"P29266"	"3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hibadh PE=1 SV=3"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"646.66418"	"1937.97800"	"1937.97747"	"0.27"	"0.00018"	"8/144"	"8"	"144"	"238138.157592773"	"HCD"	"MS2"	"5.531336"	"9.1"	"100.000"	"92.0959"	"32403"	"32403"	"32382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"12.2"	""	"14.3"	""	"14.8"	"1.9"	"11.2"	"17.4"	""	"1095"	"13"	"37.000"	"30.000"	"2.72511054025967"	"13"	"0.001488"	"0.01286"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEGPPKPDEPLR"	"[R].vFEGPPkPDEPLR.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.04004"	"1939.10556"	"1939.10532"	"0.13"	"0.00008"	"9/122"	"9"	"122"	"904847.366149902"	"HCD"	"MS2"	"48.6767"	"53.6"	"100.000"	"80.3243"	"27626"	"27626"	"27605"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.0"	""	"49.9"	""	"71.4"	""	"93.5"	"3.1"	"120.5"	"114.5"	""	"922"	"7"	"36.000"	"29.000"	"8.98878360488459"	"13"	"0.0001686"	"0.001254"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VFEGPPKPDEPLR"	"[R].vFEGPPkPDEPLR.[R]"	"N-Term(TMT6plex); K7(TMT6plex)"	"1"	"1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"B2GV54"	"Neutral cholesterol ester hydrolase 1 OS=Rattus norvegicus OX=10116 GN=Nceh1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"647.04028"	"1939.10630"	"1939.10532"	"0.50"	"0.00033"	"8/122"	"8"	"122"	"879214.236450195"	"HCD"	"MS2"	"52.90487"	"48.4"	"100.000"	"80.3932"	"27681"	"27681"	"27660"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.4"	""	"51.1"	""	"64.3"	""	"90.7"	"0.8"	"99.3"	"96.9"	""	"926"	"4"	"36.000"	"29.000"	"20.2106830327197"	"13"	"0.0001991"	"0.00227"	"0.375"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIIHGSDSVESAEK"	"[R].nIIHGSDSVESAEk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"2"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"648.68555"	"1944.04209"	"1944.04384"	"-0.90"	"-0.00058"	"15/144"	"15"	"144"	"3711089.94317627"	"HCD"	"MS2"	"27.18826"	"112.1"	"100.000"	"45.4490"	"13475"	"13475"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"141.2"	""	"105.0"	""	"127.8"	""	"223.4"	""	"240.4"	"229.5"	""	"1222"	"34"	"37.000"	"30.000"	"0.0227531332521541"	"15"	"0"	"6.814E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NIIHGSDSVESAEK"	"[R].nIIHGSDSVESAEk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"2"	"P19804"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1"	"P19804; Q05982"	"Nucleoside diphosphate kinase B OS=Rattus norvegicus OX=10116 GN=Nme2 PE=1 SV=1; Nucleoside diphosphate kinase A OS=Rattus norvegicus OX=10116 GN=Nme1 PE=1 SV=1"	"0"	"3"	"3"	"0.9574"	"0.0000"	"1"	"1"	"1"	"648.68616"	"1944.04392"	"1944.04384"	"0.04"	"0.00003"	"10/144"	"10"	"144"	"4910127.13299561"	"HCD"	"MS2"	"32.43973"	"128.9"	"100.000"	"45.1741"	"13397"	"13397"	"13376"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"170.2"	""	"115.0"	""	"138.5"	""	"269.5"	"1.3"	"284.4"	"245.2"	""	"1237"	"47"	"37.000"	"30.000"	"0.0011280794918847"	"18"	"0"	"2.196E-07"	"1.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"650.01941"	"1948.04367"	"1948.04495"	"-0.66"	"-0.00043"	"11/144"	"11"	"144"	"3567407.12615967"	"HCD"	"MS2"	"0"	"101.1"	"100.000"	"69.6808"	"23342"	"23342"	"23328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"159.6"	""	"112.8"	""	"124.3"	""	"185.0"	""	"209.4"	"173.9"	""	"1231"	"17"	"37.000"	"30.000"	"1.24803871386535"	"16"	"0"	"0.0002284"	"0.58"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"650.01953"	"1948.04404"	"1948.04495"	"-0.47"	"-0.00030"	"15/144"	"15"	"144"	"12642962.1105347"	"HCD"	"MS2"	"0"	"222.7"	"69.457"	"69.3040"	"23156"	"23156"	"23139"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"370.0"	""	"248.2"	""	"285.6"	""	"381.9"	""	"438.8"	"389.0"	""	"1233"	"22"	"37.000"	"30.000"	"0.433444085208383"	"15"	"0"	"0.0002939"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"650.01984"	"1948.04496"	"1948.04495"	"0.00"	"0.00000"	"14/144"	"14"	"144"	"14806258.3225098"	"HCD"	"MS2"	"2.992545"	"289.2"	"86.386"	"69.3977"	"23228"	"23228"	"23212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"514.6"	""	"325.9"	""	"349.0"	""	"505.6"	"1.0"	"552.9"	"489.6"	""	"1232"	"32"	"37.000"	"30.000"	"0.0427150296506206"	"18"	"0"	"1.009E-05"	"0.859"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.5714"	"0.0000"	"1"	"1"	"1"	"650.01996"	"1948.04532"	"1948.04495"	"0.19"	"0.00012"	"13/144"	"13"	"144"	"2118637.94177246"	"HCD"	"MS2"	"3.86276"	"70.6"	"100.000"	"69.1005"	"23106"	"23106"	"23092"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"112.3"	""	"81.4"	""	"89.4"	""	"124.2"	""	"141.1"	"125.1"	""	"1236"	"28"	"37.000"	"30.000"	"0.106902650999493"	"26"	"0"	"0.0001148"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.5862"	"0.0000"	"1"	"1"	"1"	"650.01996"	"1948.04532"	"1948.04495"	"0.19"	"0.00012"	"14/144"	"14"	"144"	"3062925.894104"	"HCD"	"MS2"	"0"	"82.7"	"100.000"	"69.0026"	"23033"	"23033"	"23016"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"145.3"	""	"99.9"	""	"104.0"	""	"145.6"	""	"154.2"	"139.0"	""	"1236"	"29"	"37.000"	"30.000"	"0.084720493148988"	"26"	"0"	"0.0001203"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.02002"	"1948.04551"	"1948.04495"	"0.28"	"0.00018"	"13/144"	"13"	"144"	"1779454.51251221"	"HCD"	"MS2"	"6.333337"	"59.0"	"100.000"	"69.6354"	"23290"	"23290"	"23267"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"92.6"	""	"63.2"	""	"72.2"	""	"96.0"	""	"126.2"	"114.0"	""	"1235"	"36"	"37.000"	"30.000"	"0.016241904849954"	"15"	"0"	"2.911E-05"	"0.764"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"650.02014"	"1948.04587"	"1948.04495"	"0.47"	"0.00031"	"9/144"	"9"	"144"	"316110.576721191"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"70.0128"	"23478"	"23478"	"23449"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.2"	""	"21.7"	""	"28.0"	""	"30.3"	""	"35.5"	"31.3"	""	"1236"	"7"	"37.000"	"30.000"	"13.6769253053628"	"13"	"0.0008247"	"0.007664"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTnLNR.[L]"	"N-Term(TMT6plex); N11(Deamidated)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.3235"	"0.0000"	"1"	"1"	"1"	"650.34790"	"1949.02915"	"1949.02897"	"0.09"	"0.00006"	"13/144"	"13"	"144"	"598967.214904785"	"HCD"	"MS2"	"21.76083"	"26.9"	"100.000"	"78.2320"	"26801"	"26801"	"26781"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.6"	""	"32.2"	""	"34.6"	""	"45.2"	""	"58.2"	"44.7"	""	"1147"	"34"	"37.000"	"30.000"	"0.0206791851772912"	"22"	"0"	"1.333E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLDIERPTYTNLNR"	"[R].nLDIERPTYTnLNR.[L]"	"N-Term(TMT6plex); N11(Deamidated)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"650.34802"	"1949.02951"	"1949.02897"	"0.28"	"0.00018"	"8/144"	"8"	"144"	"242599.935913086"	"HCD"	"MS2"	"14.54902"	"13.5"	"100.000"	"75.2242"	"25589"	"25589"	"25564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"14.7"	""	"18.5"	""	"28.5"	""	"28.2"	"23.3"	""	"1144"	"9"	"37.000"	"30.000"	"7.69832122520002"	"16"	"0.001951"	"0.01723"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVNTMLGQSTEELR"	"[R].nEVNTMLGQSTEELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"975.49420"	"1949.98113"	"1949.97997"	"0.59"	"0.00058"	"4/162"	"4"	"162"	"76608.0352783203"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"91.8545"	"32270"	"32270"	"32240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.9"	""	"4.5"	""	"1.7"	""	"2.6"	""	"5.8"	"5.2"	""	"973"	"11"	"36.000"	"29.000"	"3.65664537939856"	"15"	"0.001718"	"0.01502"	"0.205"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NEVNTMLGQSTEELR"	"[R].nEVNTMLGQSTEELR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"P02650"	"Apolipoprotein E OS=Rattus norvegicus OX=10116 GN=Apoe PE=1 SV=2"	"0"	"3"	"3"	"0.8305"	"0.0000"	"1"	"1"	"1"	"650.66528"	"1949.98130"	"1949.97997"	"0.68"	"0.00044"	"16/162"	"16"	"162"	"348287.697998047"	"HCD"	"MS2"	"18.82616"	"7.1"	"100.000"	"91.8754"	"32278"	"32278"	"32256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"10.6"	""	"10.2"	""	"13.5"	""	"13.9"	"9.0"	""	"970"	"59"	"36.000"	"29.000"	"6.09174532392014E-05"	"26"	"0"	"1.861E-07"	"1.216"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAKPDELMDSK"	"[K].eAkPDELMDSk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"650.69891"	"1950.08219"	"1950.08209"	"0.05"	"0.00003"	"13/114"	"13"	"114"	"2308999.9520874"	"HCD"	"MS2"	"34.10676"	"120.2"	"100.000"	"62.0946"	"20229"	"20229"	"20215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"205.5"	""	"163.0"	""	"154.0"	""	"137.5"	""	"237.4"	"243.6"	""	"1084"	"16"	"37.000"	"30.000"	"1.5031394967213"	"20"	"0"	"0.0002779"	"0.562"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGQAMLWDLNEGK"	"[K].dGQAmLWDLNEGk.[H]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"3"	"3"	"0.8125"	"0.0000"	"1"	"1"	"1"	"651.00348"	"1950.99588"	"1950.99953"	"-1.87"	"-0.00122"	"10/136"	"10"	"136"	"270482.452758789"	"HCD"	"MS2"	"10.31588"	"13.3"	"100.000"	"99.8488"	"35503"	"35503"	"35476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.1"	""	"16.4"	""	"13.4"	""	"24.5"	""	"26.2"	"23.9"	""	"1073"	"16"	"37.000"	"30.000"	"1.40789324852575"	"16"	"0.0001991"	"0.002599"	"0.363"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGQAMLWDLNEGK"	"[K].dGQAmLWDLNEGk.[H]"	"N-Term(TMT6plex); M5(Oxidation); K13(TMT6plex)"	"1"	"1"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"P63245"	"Receptor of activated protein C kinase 1 OS=Rattus norvegicus OX=10116 GN=Rack1 PE=1 SV=3"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"651.00433"	"1950.99845"	"1950.99953"	"-0.56"	"-0.00036"	"11/136"	"11"	"136"	"290316.961608887"	"HCD"	"MS2"	"20.64597"	"13.7"	"100.000"	"99.9790"	"35584"	"35584"	"35558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.4"	""	"18.6"	""	"13.5"	""	"31.3"	""	"24.7"	"24.1"	""	"1066"	"19"	"37.000"	"30.000"	"0.664855413091488"	"15"	"0.0001686"	"0.001414"	"0.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"651.68433"	"1953.03843"	"1953.03914"	"-0.37"	"-0.00024"	"16/146"	"16"	"146"	"804157.946472168"	"HCD"	"MS2"	"4.481454"	"13.3"	"100.000"	"74.6825"	"25369"	"25369"	"25351"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"12.2"	""	"13.5"	""	"25.3"	""	"26.9"	"30.0"	""	"1232"	"61"	"37.000"	"30.000"	"4.58754895926089E-05"	"19"	"0"	"2.36E-08"	"1.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9552"	"0.0000"	"1"	"1"	"1"	"651.68463"	"1953.03934"	"1953.03914"	"0.10"	"0.00007"	"16/146"	"16"	"146"	"3614056.3626709"	"HCD"	"MS2"	"2.225513"	"23.8"	"100.000"	"74.2044"	"25145"	"25145"	"25126"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"24.7"	""	"36.0"	""	"41.6"	""	"40.6"	"49.5"	""	"1211"	"67"	"37.000"	"30.000"	"1.16175392247586E-05"	"19"	"0"	"4.953E-08"	"1.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9821"	"0.0000"	"1"	"1"	"1"	"651.68469"	"1953.03952"	"1953.03914"	"0.20"	"0.00013"	"16/146"	"16"	"146"	"835670.309936523"	"HCD"	"MS2"	"29.18879"	"13.0"	"100.000"	"73.9121"	"25026"	"25026"	"25006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"16.3"	""	"15.4"	""	"17.7"	""	"25.7"	"27.5"	""	"1208"	"56"	"37.000"	"30.000"	"0.000149292138358974"	"17"	"0"	"2.15E-08"	"1.408"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9636"	"0.0000"	"1"	"1"	"1"	"651.68469"	"1953.03952"	"1953.03914"	"0.20"	"0.00013"	"16/146"	"16"	"146"	"976418.771179199"	"HCD"	"MS2"	"2.60091"	"12.6"	"100.000"	"74.5063"	"25267"	"25267"	"25246"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.4"	""	"14.6"	""	"13.6"	""	"27.1"	""	"22.4"	"27.4"	""	"1208"	"55"	"37.000"	"30.000"	"0.000198626385049094"	"18"	"0"	"1.53E-07"	"1.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"651.68469"	"1953.03952"	"1953.03914"	"0.20"	"0.00013"	"17/146"	"17"	"146"	"3246113.37084961"	"HCD"	"MS2"	"0.5478015"	"25.2"	"100.000"	"74.3851"	"25248"	"25248"	"25233"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.6"	""	"21.1"	""	"28.7"	""	"59.0"	""	"50.3"	"50.3"	""	"1208"	"61"	"37.000"	"30.000"	"5.16460294582349E-05"	"16"	"0"	"1.93E-07"	"1.212"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HGGTIPVVPTAEFQDR"	"[K].hGGTIPVVPTAEFQDR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"651.68475"	"1953.03971"	"1953.03914"	"0.29"	"0.00019"	"16/146"	"16"	"146"	"1215015.43029785"	"HCD"	"MS2"	"5.911367"	"13.9"	"100.000"	"74.1043"	"25134"	"25134"	"25112"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.6"	""	"16.1"	""	"14.0"	""	"26.2"	""	"27.8"	"29.1"	""	"1206"	"70"	"37.000"	"30.000"	"5.69268708400412E-06"	"25"	"0"	"1.479E-07"	"1.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASNVEEAFINTAK"	"[K].tASNVEEAFINTAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.03809"	"1953.06890"	"1953.06933"	"-0.22"	"-0.00022"	"7/146"	"7"	"146"	"92675.2578735352"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"102.1788"	"36472"	"36472"	"36454"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.4"	""	"6.3"	""	"7.8"	""	"14.3"	""	"12.8"	"17.0"	""	"1111"	"25"	"37.000"	"30.000"	"0.170877178058846"	"14"	"9.9E-05"	"0.0008886"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASNVEEAFINTAK"	"[K].tASNVEEAFINTAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"3"	"3"	"0.8077"	"0.0000"	"1"	"1"	"1"	"651.69452"	"1953.06900"	"1953.06933"	"-0.17"	"-0.00011"	"14/146"	"14"	"146"	"1293194.51177979"	"HCD"	"MS2"	"15.64347"	"36.6"	"100.000"	"102.1883"	"36476"	"36476"	"36467"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.2"	""	"38.3"	""	"48.7"	""	"72.4"	""	"77.7"	"63.8"	""	"1111"	"52"	"37.000"	"30.000"	"0.000321132354333876"	"26"	"0"	"9.686E-08"	"1.274"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASNVEEAFINTAK"	"[K].tASNVEEAFINTAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"977.03815"	"1953.06902"	"1953.06933"	"-0.16"	"-0.00015"	"11/146"	"11"	"146"	"99233.2370605469"	"HCD"	"MS2"	"0"	"7.3"	"100.000"	"102.0747"	"36406"	"36406"	"36385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"8.3"	""	"4.1"	""	"15.5"	""	"19.4"	"12.0"	""	"1111"	"25"	"37.000"	"30.000"	"0.17245828512053"	"14"	"0.0001686"	"0.001656"	"0.403"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TASNVEEAFINTAK"	"[K].tASNVEEAFINTAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"P05712"	"Ras-related protein Rab-2A OS=Rattus norvegicus OX=10116 GN=Rab2a PE=2 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"651.69458"	"1953.06919"	"1953.06933"	"-0.07"	"-0.00005"	"13/146"	"13"	"146"	"1589731.51940918"	"HCD"	"MS2"	"18.20657"	"41.7"	"100.000"	"101.9942"	"36373"	"36373"	"36355"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.7"	""	"46.3"	""	"48.9"	""	"78.0"	""	"88.7"	"84.1"	""	"1112"	"51"	"37.000"	"30.000"	"0.000408389710695355"	"27"	"0"	"7.209E-07"	"1.095"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.70593"	"1956.10324"	"1956.10538"	"-1.09"	"-0.00071"	"9/138"	"9"	"138"	"385810.039428711"	"HCD"	"MS2"	"17.23213"	"14.9"	"100.000"	"91.3600"	"32105"	"32105"	"32084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"15.8"	""	"17.5"	""	"29.7"	""	"29.7"	"31.1"	""	"979"	"22"	"36.000"	"29.000"	"0.330181469558132"	"14"	"0.0001991"	"0.004269"	"0.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"978.55554"	"1956.10381"	"1956.10538"	"-0.80"	"-0.00079"	"6/138"	"6"	"138"	"94911.0430297852"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"91.4060"	"32124"	"32124"	"32099"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.7"	""	"1.8"	""	"2.2"	""	"3.3"	""	"8.1"	"6.6"	""	"978"	"4"	"36.000"	"29.000"	"18.5058423926659"	"13"	"0.001488"	"0.01246"	"0.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"2"	"2"	"0.7000"	"0.0000"	"1"	"1"	"1"	"978.55573"	"1956.10417"	"1956.10538"	"-0.62"	"-0.00060"	"4/138"	"4"	"138"	"55893.1016235352"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"91.4437"	"32103"	"32103"	"32074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.1"	""	"2.7"	""	"1.9"	""	"6.6"	""	"5.2"	"5.2"	""	"972"	"10"	"36.000"	"29.000"	"4.77129500307713"	"16"	"0.0005161"	"0.006594"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"652.70654"	"1956.10508"	"1956.10538"	"-0.15"	"-0.00010"	"11/138"	"11"	"138"	"283169.059082031"	"HCD"	"MS2"	"13.76157"	"11.4"	"100.000"	"91.0951"	"31961"	"31961"	"31939"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"10.0"	""	"16.2"	""	"17.9"	""	"24.6"	"24.3"	""	"991"	"24"	"36.000"	"29.000"	"0.184945453187779"	"15"	"9.9E-05"	"0.0006866"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"652.70685"	"1956.10599"	"1956.10538"	"0.31"	"0.00020"	"11/138"	"11"	"138"	"364241.247680664"	"HCD"	"MS2"	"25.26268"	"12.4"	"100.000"	"91.0388"	"31976"	"31976"	"31956"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.7"	""	"10.9"	""	"12.1"	""	"18.0"	"1.5"	"33.6"	"25.3"	""	"981"	"26"	"36.000"	"29.000"	"0.123776731890172"	"15"	"9.9E-05"	"0.0005858"	"0.496"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVGIPPEQSLETAK"	"[R].eVGIPPEQSLETAk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"Q4V7C7"	"Actin-related protein 3 OS=Rattus norvegicus OX=10116 GN=Actr3 PE=1 SV=1"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"652.70685"	"1956.10599"	"1956.10538"	"0.31"	"0.00020"	"12/138"	"12"	"138"	"444000.327514648"	"HCD"	"MS2"	"31.53333"	"13.7"	"100.000"	"91.6215"	"32175"	"32175"	"32148"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"15.5"	""	"12.1"	""	"25.1"	""	"32.3"	"27.2"	""	"981"	"28"	"36.000"	"29.000"	"0.0791842872123391"	"15"	"0"	"0.0002253"	"0.581"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLHNEDQMAVEK"	"[R].wLHNEDQMAVEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8511"	"0.0000"	"1"	"1"	"1"	"653.34430"	"1958.01834"	"1958.02060"	"-1.15"	"-0.00075"	"12/116"	"12"	"116"	"890899.061218262"	"HCD"	"MS2"	"0"	"33.2"	"100.000"	"75.2543"	"25601"	"25601"	"25578"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.2"	""	"35.3"	""	"36.5"	""	"41.2"	"0.8"	"68.7"	"71.8"	""	"1121"	"47"	"37.000"	"30.000"	"0.00116835713997603"	"22"	"0"	"1.896E-05"	"0.802"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLHNEDQMAVEK"	"[R].wLHNEDQMAVEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.7949"	"0.0000"	"1"	"1"	"1"	"653.34436"	"1958.01853"	"1958.02060"	"-1.06"	"-0.00069"	"11/116"	"11"	"116"	"702699.771179199"	"HCD"	"MS2"	"7.259019"	"35.1"	"100.000"	"75.3454"	"25607"	"25607"	"25585"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.0"	""	"44.2"	""	"43.7"	""	"57.0"	"2.0"	"70.4"	"59.9"	""	"1121"	"39"	"37.000"	"30.000"	"0.00784468694301952"	"23"	"0"	"0.0003419"	"0.544"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLHNEDQMAVEK"	"[R].wLHNEDQMAVEk.[L]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"0.8036"	"0.0000"	"1"	"1"	"1"	"653.34448"	"1958.01889"	"1958.02060"	"-0.87"	"-0.00057"	"14/116"	"14"	"116"	"787842.510498047"	"HCD"	"MS2"	"4.144483"	"32.3"	"100.000"	"75.0481"	"25486"	"25486"	"25460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"59.9"	""	"37.8"	""	"38.6"	""	"41.3"	""	"69.1"	"62.2"	""	"1130"	"56"	"37.000"	"30.000"	"0.000145562145370646"	"27"	"0"	"5.832E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKLEAPDADELPR"	"[K].fkLEAPDADELPR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.70288"	"1959.09409"	"1959.09515"	"-0.54"	"-0.00035"	"17/130"	"17"	"130"	"359791.314880371"	"HCD"	"MS2"	"0"	"18.4"	"100.000"	"97.6912"	"34630"	"34630"	"34599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.4"	""	"30.1"	""	"33.5"	""	"21.2"	""	"28.2"	"26.6"	""	"1170"	"34"	"37.000"	"30.000"	"0.0217348109021846"	"15"	"0.0001686"	"0.001237"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKLEAPDADELPR"	"[K].fkLEAPDADELPR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.70300"	"1959.09446"	"1959.09515"	"-0.35"	"-0.00023"	"10/130"	"10"	"130"	"515049.625854492"	"HCD"	"MS2"	"0"	"28.3"	"100.000"	"97.9986"	"34754"	"34754"	"34734"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.5"	""	"42.0"	""	"40.6"	""	"38.1"	""	"42.3"	"44.7"	""	"1169"	"33"	"37.000"	"30.000"	"0.0287597108605808"	"15"	"0.0001686"	"0.001061"	"0.443"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FKLEAPDADELPR"	"[K].fkLEAPDADELPR.[S]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"653.70325"	"1959.09519"	"1959.09515"	"0.02"	"0.00001"	"7/130"	"7"	"130"	"682076.718688965"	"HCD"	"MS2"	"4.540431"	"35.2"	"100.000"	"97.8323"	"34718"	"34718"	"34694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"89.4"	""	"45.5"	""	"50.2"	""	"47.5"	""	"48.0"	"53.2"	""	"1166"	"36"	"37.000"	"30.000"	"0.016020222912587"	"15"	"0"	"0.0003353"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQRPVPESQLLPGQR"	"[K].qQRPVPESQLLPGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.70721"	"1962.10709"	"1962.10822"	"-0.58"	"-0.00038"	"11/142"	"11"	"142"	"657886.723449707"	"HCD"	"MS2"	"63.22116"	"29.2"	"100.000"	"46.9245"	"14068"	"14068"	"14051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"30.9"	""	"32.7"	""	"51.6"	"0.1"	"60.5"	"65.7"	""	"1158"	"17"	"37.000"	"30.000"	"1.2551006766906"	"14"	"0"	"0.0002182"	"0.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QQRPVPESQLLPGQR"	"[K].qQRPVPESQLLPGQR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"Q07014"	"Tyrosine-protein kinase Lyn OS=Rattus norvegicus OX=10116 GN=Lyn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.70764"	"1962.10837"	"1962.10822"	"0.08"	"0.00005"	"8/142"	"8"	"142"	"638672.179260254"	"HCD"	"MS2"	"43.91862"	"27.8"	"100.000"	"46.5312"	"13946"	"13946"	"13928"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.6"	""	"31.5"	""	"33.6"	""	"47.3"	""	"60.3"	"56.6"	""	"1167"	"19"	"37.000"	"30.000"	"0.765668641077705"	"14"	"0"	"0.0002661"	"0.566"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGDFGADAQGAMSK"	"[R].ySGDFGADAQGAMSk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.99176"	"1962.96073"	"1962.96315"	"-1.23"	"-0.00081"	"12/146"	"12"	"146"	"422311.898193359"	"HCD"	"MS2"	"9.499436"	"16.6"	"100.000"	"85.7660"	"29853"	"29853"	"29834"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.2"	""	"13.3"	""	"18.5"	""	"15.2"	""	"19.3"	"63.6"	""	"822"	"39"	"36.000"	"29.000"	"0.00491860358367277"	"15"	"0"	"4.387E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGDFGADAQGAMSK"	"[R].ySGDFGADAQGAMSk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.99274"	"1962.96366"	"1962.96315"	"0.26"	"0.00017"	"11/146"	"11"	"146"	"418937.815979004"	"HCD"	"MS2"	"21.83173"	"16.5"	"100.000"	"85.8288"	"29849"	"29849"	"29834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"16.4"	""	"18.1"	""	"15.7"	""	"20.3"	"67.4"	""	"863"	"21"	"36.000"	"29.000"	"0.315486514523095"	"14"	"0"	"1.653E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGDFGADAQGAMSK"	"[R].ySGDFGADAQGAMSk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"0.9828"	"0.0000"	"1"	"1"	"1"	"654.99316"	"1962.96494"	"1962.96315"	"0.91"	"0.00060"	"13/146"	"13"	"146"	"494381.377380371"	"HCD"	"MS2"	"0"	"19.9"	"100.000"	"85.4923"	"29714"	"29714"	"29689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.2"	""	"16.3"	""	"14.6"	""	"15.0"	"0.4"	"17.4"	"84.6"	""	"871"	"58"	"36.000"	"29.000"	"7.34493842556797E-05"	"17"	"0"	"4.634E-07"	"1.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGDFGADAQGAMSK"	"[R].ySGDFGADAQGAMSk.[A]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"654.99438"	"1962.96860"	"1962.96315"	"2.78"	"0.00182"	"13/146"	"13"	"146"	"262040.153747559"	"HCD"	"MS2"	"31.92516"	"11.9"	"100.000"	"85.4041"	"29708"	"29708"	"29683"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"13.4"	""	"12.4"	""	"11.3"	""	"10.8"	"45.1"	""	"888"	"65"	"36.000"	"29.000"	"1.4702221793827E-05"	"17"	"0"	"3.296E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"655.02252"	"1963.05301"	"1963.05368"	"-0.34"	"-0.00022"	"13/136"	"13"	"136"	"1051136.92950439"	"HCD"	"MS2"	"35.53969"	"37.4"	"100.000"	"76.4425"	"26053"	"26053"	"26032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.1"	""	"44.5"	""	"50.4"	""	"60.9"	""	"77.0"	"67.5"	""	"1225"	"45"	"37.000"	"30.000"	"0.00209462408539647"	"20"	"0"	"4.298E-06"	"0.935"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"982.03058"	"1963.05388"	"1963.05368"	"0.10"	"0.00010"	"5/136"	"5"	"136"	"88060.4302978516"	"HCD"	"MS2"	"100"	"4.6"	"100.000"	"76.6437"	"26167"	"26167"	"26137"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"7.4"	""	"7.9"	""	"4.2"	""	"6.4"	"8.7"	""	"1211"	"9"	"37.000"	"30.000"	"7.62279336841369"	"15"	"0.0042"	"0.04532"	"0.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AAAEVNQEYGLDPK"	"[R].aAAEVNQEYGLDPk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"P14408"	"Fumarate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Fh PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"655.02295"	"1963.05429"	"1963.05368"	"0.31"	"0.00021"	"13/136"	"13"	"136"	"1088595.88604736"	"HCD"	"MS2"	"29.22931"	"38.1"	"100.000"	"76.5494"	"26128"	"26128"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.7"	""	"52.8"	""	"44.8"	""	"51.5"	"0.7"	"68.7"	"80.0"	""	"1233"	"40"	"37.000"	"30.000"	"0.00601081111652769"	"17"	"0"	"2.391E-06"	"0.987"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"655.67926"	"1965.02323"	"1965.02791"	"-2.38"	"-0.00156"	"13/146"	"13"	"146"	"2309026.52203369"	"HCD"	"MS2"	"11.20587"	"69.4"	"100.000"	"74.0558"	"25114"	"25114"	"25096"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"79.2"	""	"80.4"	""	"90.6"	""	"127.4"	""	"150.2"	"136.6"	""	"1167"	"22"	"37.000"	"30.000"	"0.391778735682293"	"16"	"9.9E-05"	"0.0007456"	"0.474"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.67963"	"1965.02433"	"1965.02791"	"-1.82"	"-0.00119"	"11/146"	"11"	"146"	"681993.954101563"	"HCD"	"MS2"	"47.77335"	"26.6"	"100.000"	"77.4091"	"26470"	"26470"	"26455"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.5"	""	"33.1"	""	"34.4"	""	"46.5"	"1.3"	"56.4"	"50.0"	""	"1159"	"32"	"37.000"	"30.000"	"0.0399074005731508"	"18"	"0"	"0.0003364"	"0.545"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.8182"	"0.0000"	"1"	"1"	"1"	"492.01160"	"1965.02456"	"1965.02791"	"-1.70"	"-0.00084"	"8/146"	"8"	"146"	"796173.022827148"	"HCD"	"MS2"	"0"	"22.1"	"100.000"	"72.2624"	"24385"	"24385"	"24358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"30.2"	""	"22.5"	""	"44.6"	""	"47.8"	"47.0"	""	"1158"	"22"	"37.000"	"30.000"	"0.348882000337053"	"18"	"0.001406"	"0.01154"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7241"	"0.0000"	"1"	"1"	"1"	"655.68005"	"1965.02561"	"1965.02791"	"-1.17"	"-0.00077"	"15/146"	"15"	"146"	"2643896.10461426"	"HCD"	"MS2"	"22.57246"	"71.1"	"100.000"	"73.9028"	"25023"	"25023"	"25006"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.9"	""	"90.7"	""	"83.6"	""	"128.7"	""	"155.4"	"134.6"	""	"1174"	"29"	"37.000"	"30.000"	"0.0749269580772259"	"22"	"0"	"8.936E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"655.68018"	"1965.02597"	"1965.02791"	"-0.98"	"-0.00064"	"4/146"	"4"	"146"	"142275.161499023"	"HCD"	"MS2"	"10.62268"	"8.3"	"100.000"	"85.2942"	"29634"	"29634"	"29607"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.7"	""	"8.7"	""	"8.2"	""	"15.5"	""	"14.9"	"21.8"	""	"1182"	"10"	"37.000"	"30.000"	"6.58548069352713"	"16"	"0.004234"	"0.04843"	"0.098"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.7647"	"0.0000"	"1"	"1"	"1"	"492.01199"	"1965.02614"	"1965.02791"	"-0.90"	"-0.00044"	"5/146"	"5"	"146"	"2166094.46270752"	"HCD"	"MS2"	"3.967129"	"52.7"	"100.000"	"72.7685"	"24560"	"24560"	"24538"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.3"	""	"61.6"	""	"57.5"	""	"109.3"	"0.1"	"117.0"	"98.6"	""	"1183"	"34"	"37.000"	"30.000"	"0.0255243533943623"	"23"	"0.0001991"	"0.001977"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"655.68024"	"1965.02616"	"1965.02791"	"-0.89"	"-0.00058"	"10/146"	"10"	"146"	"739011.967956543"	"HCD"	"MS2"	"47.84583"	"27.0"	"100.000"	"77.3214"	"26406"	"26406"	"26387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"33.0"	""	"37.6"	""	"48.7"	"1.8"	"50.4"	"53.1"	""	"1183"	"29"	"37.000"	"30.000"	"0.0712778758729918"	"16"	"0"	"0.0003055"	"0.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"655.68030"	"1965.02634"	"1965.02791"	"-0.80"	"-0.00052"	"15/146"	"15"	"146"	"3451117.74438477"	"HCD"	"MS2"	"15.12423"	"78.9"	"100.000"	"73.6192"	"24907"	"24907"	"24889"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"104.8"	""	"90.1"	""	"101.7"	""	"152.6"	""	"155.0"	"144.4"	""	"1177"	"30"	"37.000"	"30.000"	"0.0533023635628591"	"16"	"0"	"6.172E-05"	"0.697"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.8667"	"0.0000"	"1"	"1"	"1"	"492.01208"	"1965.02651"	"1965.02791"	"-0.71"	"-0.00035"	"9/146"	"9"	"146"	"3664247.76757813"	"HCD"	"MS2"	"5.742074"	"78.3"	"100.000"	"72.4246"	"24420"	"24420"	"24400"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.9"	""	"94.5"	""	"77.0"	""	"160.5"	""	"191.2"	"147.0"	""	"1175"	"30"	"37.000"	"30.000"	"0.0650141473086879"	"18"	"0.0001686"	"0.001547"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.68042"	"1965.02671"	"1965.02791"	"-0.61"	"-0.00040"	"12/146"	"12"	"146"	"580083.049804688"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"75.7713"	"25780"	"25780"	"25759"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"23.2"	""	"25.1"	""	"35.7"	""	"54.1"	"47.6"	""	"1176"	"32"	"37.000"	"30.000"	"0.0341489477502531"	"18"	"9.9E-05"	"0.0006469"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"655.68042"	"1965.02671"	"1965.02791"	"-0.61"	"-0.00040"	"11/146"	"11"	"146"	"794319.136657715"	"HCD"	"MS2"	"11.64205"	"26.9"	"100.000"	"75.2084"	"25582"	"25582"	"25564"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"27.8"	""	"32.4"	""	"61.6"	""	"58.6"	"51.8"	""	"1176"	"43"	"37.000"	"30.000"	"0.00273134981830977"	"23"	"0"	"8.614E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"655.68048"	"1965.02689"	"1965.02791"	"-0.52"	"-0.00034"	"14/146"	"14"	"146"	"2414343.78515625"	"HCD"	"MS2"	"10.88041"	"79.6"	"100.000"	"72.0347"	"24262"	"24262"	"24251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"94.3"	""	"104.8"	""	"85.0"	""	"151.9"	""	"171.8"	"153.6"	""	"1181"	"28"	"37.000"	"30.000"	"0.0843761882500807"	"16"	"0"	"0.000104"	"0.65"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"983.01715"	"1965.02703"	"1965.02791"	"-0.45"	"-0.00044"	"5/146"	"5"	"146"	"83502.3312988281"	"HCD"	"MS2"	"0"	"3.3"	"100.000"	"72.3310"	"24383"	"24383"	"24352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.9"	""	"5.8"	""	"2.8"	""	"6.9"	""	"4.1"	"7.9"	""	"1181"	"11"	"37.000"	"30.000"	"4.65821899453756"	"13"	"0.0065"	"0.08085"	"0.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.68054"	"1965.02707"	"1965.02791"	"-0.42"	"-0.00028"	"13/146"	"13"	"146"	"584586.975708008"	"HCD"	"MS2"	"4.427352"	"24.8"	"100.000"	"76.1783"	"25977"	"25977"	"25957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.8"	""	"28.4"	""	"26.0"	""	"43.8"	""	"58.9"	"51.7"	""	"1181"	"32"	"37.000"	"30.000"	"0.0414209353716993"	"18"	"9.9E-05"	"0.0006328"	"0.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8387"	"0.0000"	"1"	"1"	"1"	"655.68054"	"1965.02707"	"1965.02791"	"-0.42"	"-0.00028"	"14/146"	"14"	"146"	"677931.224487305"	"HCD"	"MS2"	"2.05124"	"23.4"	"100.000"	"75.1127"	"25512"	"25512"	"25492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.5"	""	"21.7"	""	"32.4"	""	"48.7"	""	"49.0"	"45.0"	""	"1181"	"31"	"37.000"	"30.000"	"0.0429753974578995"	"20"	"0"	"0.0003144"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"655.68060"	"1965.02726"	"1965.02791"	"-0.33"	"-0.00022"	"13/146"	"13"	"146"	"573327.609985352"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"75.8232"	"25833"	"25833"	"25809"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"16.8"	""	"26.6"	""	"38.6"	""	"49.9"	"41.2"	""	"1183"	"39"	"37.000"	"30.000"	"0.00671358897470173"	"21"	"0"	"0.0002815"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.8000"	"0.0000"	"1"	"1"	"1"	"492.01227"	"1965.02724"	"1965.02791"	"-0.34"	"-0.00017"	"8/146"	"8"	"146"	"2113501.22644043"	"HCD"	"MS2"	"1.530341"	"50.2"	"100.000"	"72.9196"	"24651"	"24651"	"24632"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.7"	""	"55.3"	""	"58.6"	""	"100.8"	"0.2"	"119.4"	"95.9"	""	"1183"	"20"	"37.000"	"30.000"	"0.616530759486139"	"18"	"0.001406"	"0.01155"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8718"	"0.0000"	"1"	"1"	"1"	"655.68066"	"1965.02744"	"1965.02791"	"-0.24"	"-0.00016"	"12/146"	"12"	"146"	"604886.893066406"	"HCD"	"MS2"	"0"	"21.7"	"100.000"	"75.5056"	"25703"	"25703"	"25681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"27.1"	""	"25.9"	""	"44.3"	""	"49.1"	"39.2"	""	"1183"	"39"	"37.000"	"30.000"	"0.00688580546396305"	"20"	"0"	"5.269E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8372"	"0.0000"	"1"	"1"	"1"	"655.68066"	"1965.02744"	"1965.02791"	"-0.24"	"-0.00016"	"11/146"	"11"	"146"	"958357.335998535"	"HCD"	"MS2"	"12.64293"	"33.1"	"100.000"	"74.9107"	"25461"	"25461"	"25443"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.0"	""	"33.7"	""	"43.6"	""	"67.1"	"1.2"	"71.2"	"67.4"	""	"1183"	"43"	"37.000"	"30.000"	"0.00273498374157662"	"23"	"0"	"1.431E-05"	"0.828"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"655.68066"	"1965.02744"	"1965.02791"	"-0.24"	"-0.00016"	"11/146"	"11"	"146"	"889247.192810059"	"HCD"	"MS2"	"2.024032"	"30.3"	"100.000"	"74.7484"	"25364"	"25364"	"25349"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.7"	""	"38.4"	""	"30.8"	""	"65.2"	""	"62.2"	"66.5"	""	"1183"	"35"	"37.000"	"30.000"	"0.0168637730522856"	"20"	"0"	"6.075E-05"	"0.698"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.7419"	"0.0000"	"1"	"1"	"1"	"492.01236"	"1965.02761"	"1965.02791"	"-0.15"	"-0.00007"	"5/146"	"5"	"146"	"3451117.17456055"	"HCD"	"MS2"	"3.720403"	"75.6"	"100.000"	"72.5853"	"24515"	"24515"	"24494"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"70.7"	""	"87.3"	""	"80.8"	""	"151.5"	""	"181.6"	"152.9"	""	"1185"	"31"	"37.000"	"30.000"	"0.0513674911386743"	"22"	"0.0001991"	"0.003018"	"0.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8113"	"0.0000"	"1"	"1"	"1"	"655.68073"	"1965.02762"	"1965.02791"	"-0.15"	"-0.00010"	"13/146"	"13"	"146"	"4692162.70269775"	"HCD"	"MS2"	"11.57321"	"104.8"	"100.000"	"73.2689"	"24764"	"24764"	"24746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"113.5"	""	"131.2"	""	"124.9"	""	"214.0"	""	"206.1"	"207.5"	""	"1183"	"53"	"37.000"	"30.000"	"0.00032059352667256"	"25"	"0"	"4.211E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"4"	"4"	"0.7727"	"0.0000"	"1"	"1"	"1"	"492.01245"	"1965.02797"	"1965.02791"	"0.03"	"0.00002"	"8/146"	"8"	"146"	"957412.14453125"	"HCD"	"MS2"	"10.39168"	"27.7"	"100.000"	"72.1315"	"24302"	"24302"	"24272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.3"	""	"29.3"	""	"36.0"	""	"55.6"	"0.6"	"62.5"	"50.7"	""	"1183"	"22"	"37.000"	"30.000"	"0.388109925018168"	"19"	"0.00394"	"0.04353"	"0.108"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"655.68085"	"1965.02799"	"1965.02791"	"0.04"	"0.00003"	"13/146"	"13"	"146"	"607187.331542969"	"HCD"	"MS2"	"6.364582"	"24.8"	"100.000"	"76.1058"	"25916"	"25916"	"25893"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.0"	"2.1"	"25.8"	""	"27.8"	""	"43.2"	""	"60.8"	"47.6"	""	"1183"	"33"	"37.000"	"30.000"	"0.0299885003944487"	"17"	"0"	"0.0002325"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7895"	"0.0000"	"1"	"1"	"1"	"655.68085"	"1965.02799"	"1965.02791"	"0.04"	"0.00003"	"13/146"	"13"	"146"	"7635780.63903809"	"HCD"	"MS2"	"2.776271"	"148.2"	"100.000"	"72.9509"	"24635"	"24635"	"24618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.6"	""	"156.5"	""	"151.9"	""	"305.1"	"1.0"	"357.5"	"288.9"	""	"1183"	"57"	"37.000"	"30.000"	"0.000114275925951551"	"28"	"0"	"1.331E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8605"	"0.0000"	"1"	"1"	"1"	"655.68091"	"1965.02817"	"1965.02791"	"0.13"	"0.00009"	"12/146"	"12"	"146"	"4605503.69769287"	"HCD"	"MS2"	"12.39461"	"106.6"	"100.000"	"73.4453"	"24866"	"24866"	"24849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"128.4"	""	"121.0"	""	"124.0"	""	"222.7"	"2.5"	"221.8"	"191.5"	""	"1183"	"43"	"37.000"	"30.000"	"0.00286387955425995"	"21"	"0"	"1.141E-05"	"0.848"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"655.68103"	"1965.02854"	"1965.02791"	"0.32"	"0.00021"	"13/146"	"13"	"146"	"1252040.16265869"	"HCD"	"MS2"	"13.23247"	"41.3"	"100.000"	"74.6064"	"25338"	"25338"	"25319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"40.3"	""	"44.2"	""	"47.3"	""	"83.2"	""	"91.4"	"90.0"	""	"1192"	"28"	"37.000"	"30.000"	"0.0962157699868585"	"17"	"9.9E-05"	"0.0007867"	"0.469"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"655.68103"	"1965.02854"	"1965.02791"	"0.32"	"0.00021"	"14/146"	"14"	"146"	"3319784.71838379"	"HCD"	"MS2"	"10.81972"	"96.4"	"100.000"	"72.2370"	"24375"	"24375"	"24358"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.0"	""	"122.8"	""	"106.8"	""	"197.6"	""	"208.0"	"190.5"	""	"1192"	"29"	"37.000"	"30.000"	"0.0697021637047843"	"17"	"9.9E-05"	"0.0006804"	"0.482"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"655.68103"	"1965.02854"	"1965.02791"	"0.32"	"0.00021"	"15/146"	"15"	"146"	"3773867.70715332"	"HCD"	"MS2"	"51.72395"	"81.2"	"100.000"	"73.7564"	"24993"	"24993"	"24976"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"111.5"	""	"104.0"	""	"103.4"	""	"149.5"	"1.6"	"152.4"	"146.8"	""	"1192"	"30"	"37.000"	"30.000"	"0.0616944731340889"	"16"	"0"	"6.238E-05"	"0.696"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8276"	"0.0000"	"1"	"1"	"1"	"655.68103"	"1965.02854"	"1965.02791"	"0.32"	"0.00021"	"14/146"	"14"	"146"	"16894903.7020264"	"HCD"	"MS2"	"1.84151"	"189.4"	"59.044"	"72.6440"	"24510"	"24510"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"191.3"	""	"188.3"	""	"191.0"	""	"415.6"	"1.2"	"443.4"	"370.9"	""	"1192"	"58"	"37.000"	"30.000"	"8.774982514499E-05"	"26"	"0"	"3.698E-08"	"1.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"655.68109"	"1965.02872"	"1965.02791"	"0.41"	"0.00027"	"13/146"	"13"	"146"	"1433508.72406006"	"HCD"	"MS2"	"16.28923"	"50.7"	"100.000"	"74.4694"	"25252"	"25252"	"25232"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.2"	""	"58.2"	""	"53.8"	""	"87.7"	"0.4"	"127.8"	"107.5"	""	"1192"	"27"	"37.000"	"30.000"	"0.120571943049225"	"17"	"9.9E-05"	"0.0006438"	"0.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"655.68115"	"1965.02890"	"1965.02791"	"0.51"	"0.00033"	"11/146"	"11"	"146"	"609609.509033203"	"HCD"	"MS2"	"0"	"22.8"	"100.000"	"75.4629"	"25655"	"25655"	"25631"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.5"	""	"30.0"	""	"27.9"	""	"40.8"	""	"48.8"	"46.2"	""	"1190"	"36"	"37.000"	"30.000"	"0.0145384117885291"	"20"	"9.9E-05"	"0.0006044"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"655.68127"	"1965.02927"	"1965.02791"	"0.69"	"0.00045"	"15/146"	"15"	"146"	"18281743.3822632"	"HCD"	"MS2"	"0.4695287"	"235.9"	"67.279"	"72.3358"	"24385"	"24385"	"24368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"229.3"	""	"269.5"	""	"239.3"	""	"522.7"	""	"549.7"	"448.7"	""	"1189"	"32"	"37.000"	"30.000"	"0.0393687711450698"	"19"	"0"	"4.503E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"655.68134"	"1965.02945"	"1965.02791"	"0.79"	"0.00052"	"13/146"	"13"	"146"	"4903060.56719971"	"HCD"	"MS2"	"39.38019"	"112.0"	"100.000"	"73.5722"	"24917"	"24917"	"24897"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"166.7"	""	"151.4"	""	"150.3"	""	"194.2"	""	"218.8"	"185.8"	""	"1189"	"13"	"37.000"	"30.000"	"2.812884234526"	"14"	"0.0001991"	"0.002727"	"0.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"655.68134"	"1965.02945"	"1965.02791"	"0.79"	"0.00052"	"13/146"	"13"	"146"	"6864306.5111084"	"HCD"	"MS2"	"0.2590266"	"145.2"	"100.000"	"73.1481"	"24745"	"24745"	"24728"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"142.2"	""	"168.1"	""	"151.6"	""	"283.6"	""	"346.3"	"291.3"	""	"1189"	"36"	"37.000"	"30.000"	"0.013650603713028"	"21"	"0"	"3.778E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"655.68140"	"1965.02964"	"1965.02791"	"0.88"	"0.00058"	"7/146"	"7"	"146"	"209192.607543945"	"HCD"	"MS2"	"6.496844"	"9.4"	"100.000"	"83.6852"	"29013"	"29013"	"28988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"13.9"	""	"11.9"	""	"15.9"	""	"20.7"	"17.6"	""	"1189"	"8"	"37.000"	"30.000"	"9.03965506425969"	"14"	"0.0001991"	"0.004084"	"0.322"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.7761"	"0.0000"	"1"	"1"	"1"	"655.68170"	"1965.03055"	"1965.02791"	"1.35"	"0.00088"	"8/146"	"8"	"146"	"20800322.8879395"	"HCD"	"MS2"	"3.270778"	"217.1"	"54.729"	"72.5347"	"24495"	"24495"	"24478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"198.6"	""	"236.4"	""	"219.6"	""	"471.9"	""	"508.1"	"431.4"	""	"1198"	"67"	"37.000"	"30.000"	"1.26016328542012E-05"	""	"0"	"4.184E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TYFSHIDVSPGSAQVK"	"[K].TYFSHIDVSPGSAQVk.[A]"	"K16(TMT6plex)"	"1"	"1"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"P01946"	"Hemoglobin subunit alpha-1/2 OS=Rattus norvegicus OX=10116 GN=Hba1 PE=1 SV=3"	"0"	"3"	"3"	"0.8197"	"0.0000"	"1"	"1"	"1"	"655.68188"	"1965.03110"	"1965.02791"	"1.63"	"0.00106"	"14/146"	"14"	"146"	"16757309.2559814"	"HCD"	"MS2"	"1.903267"	"170.1"	"53.538"	"72.8344"	"24617"	"24617"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"174.0"	""	"190.3"	""	"177.7"	""	"363.8"	"3.1"	"397.3"	"311.5"	""	"1198"	"61"	"37.000"	"30.000"	"5.00526207920518E-05"	"27"	"0"	"5.284E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVmEFVLPR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"656.00201"	"1965.99149"	"1965.99416"	"-1.36"	"-0.00089"	"11/120"	"11"	"120"	"205318.727050781"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"100.2304"	"35686"	"35686"	"35665"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.1"	""	"7.6"	""	"7.8"	""	"15.7"	""	"10.9"	"12.5"	""	"990"	"29"	"36.000"	"29.000"	"0.0675468652611518"	"16"	"9.9E-05"	"0.0008876"	"0.459"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVmEFVLPR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.00226"	"1965.99222"	"1965.99416"	"-0.99"	"-0.00065"	"13/120"	"13"	"120"	"248143.907470703"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"100.0702"	"35593"	"35593"	"35572"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.0"	""	"7.1"	""	"8.8"	""	"12.2"	""	"16.8"	"10.6"	""	"994"	"41"	"36.000"	"29.000"	"0.00399352482726252"	"15"	"0"	"4.999E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVmEFVLPR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.00244"	"1965.99277"	"1965.99416"	"-0.71"	"-0.00046"	"15/120"	"15"	"120"	"935951.439208984"	"HCD"	"MS2"	"0"	"10.2"	"100.000"	"100.3657"	"35713"	"35713"	"35692"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.2"	""	"11.9"	""	"10.5"	""	"28.1"	""	"17.6"	"19.3"	""	"993"	"30"	"36.000"	"29.000"	"0.0460171007307847"	"14"	"0"	"4.69E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVmEFVLPR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.00269"	"1965.99350"	"1965.99416"	"-0.34"	"-0.00022"	"14/120"	"14"	"120"	"498012.254699707"	"HCD"	"MS2"	"5.457111"	"8.2"	"100.000"	"99.8873"	"35546"	"35546"	"35527"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.0"	""	"11.1"	""	"13.3"	""	"20.7"	""	"12.1"	"9.2"	""	"986"	"24"	"36.000"	"29.000"	"0.19179925648218"	"14"	"0"	"7.217E-05"	"0.683"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVmEFVLPR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.00269"	"1965.99350"	"1965.99416"	"-0.34"	"-0.00022"	"9/120"	"9"	"120"	"821126.06439209"	"HCD"	"MS2"	"14.97511"	"10.2"	"100.000"	"99.7635"	"35468"	"35468"	"35445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"16.3"	""	"11.4"	""	"23.4"	""	"22.3"	"15.0"	""	"986"	"54"	"36.000"	"29.000"	"0.000215698397843018"	"16"	"0"	"1.035E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEHSFTVMEFVLPR"	"[K].eEHSFTVmEFVLPR.[F]"	"N-Term(TMT6plex); M8(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.00323"	"1965.99515"	"1965.99416"	"0.50"	"0.00033"	"9/120"	"9"	"120"	"860588.24407959"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"100.5240"	"35805"	"35805"	"35785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.1"	""	"11.8"	""	"11.2"	""	"32.1"	""	"15.7"	"18.0"	""	"1017"	"43"	"37.000"	"30.000"	"0.002313614285863"	"15"	"0"	"9.02E-06"	"0.869"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EAKPDELMDSK"	"[K].eAkPDELmDSk.[L]"	"N-Term(TMT6plex); K3(TMT6plex); M8(Oxidation); K11(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"656.03033"	"1966.07645"	"1966.07700"	"-0.28"	"-0.00018"	"7/114"	"7"	"114"	"923529.423461914"	"HCD"	"MS2"	"0"	"64.6"	"100.000"	"45.4513"	"13476"	"13476"	"13452"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.3"	""	"69.6"	""	"68.3"	""	"149.3"	""	"122.5"	"117.5"	""	"1201"	"15"	"37.000"	"30.000"	"2.12575403320602"	"22"	"0.004114"	"0.04491"	"0.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQLREPVLNDELPGR"	"[R].tQLREPVLNDELPGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"P36365"	"Dimethylaniline monooxygenase [N-oxide-forming] 1 OS=Rattus norvegicus OX=10116 GN=Fmo1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"656.03528"	"1966.09128"	"1966.09190"	"-0.32"	"-0.00021"	"7/158"	"7"	"158"	"3196283.90936279"	"HCD"	"MS2"	"70.80208"	"76.8"	"100.000"	"73.5824"	"24892"	"24892"	"24873"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"135.6"	""	"119.2"	""	"108.3"	""	"129.7"	""	"119.3"	"117.2"	""	"1132"	"16"	"37.000"	"30.000"	"1.38936524627773"	"14"	"0.0001686"	"0.001922"	"0.39"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDGPVQGVIHFEQK"	"[K].gDGPVQGVIHFEQk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.03491"	"1969.09018"	"1969.09073"	"-0.28"	"-0.00018"	"13/140"	"13"	"140"	"983972.222351074"	"HCD"	"MS2"	"30.36572"	"32.0"	"100.000"	"82.1622"	"28371"	"28371"	"28352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.6"	""	"23.4"	""	"34.0"	""	"76.2"	"0.0"	"67.8"	"54.4"	""	"1114"	"49"	"37.000"	"30.000"	"0.000739358712955465"	"16"	"0"	"4.85E-07"	"1.13"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDGPVQGVIHFEQK"	"[K].gDGPVQGVIHFEQk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.03510"	"1969.09073"	"1969.09073"	"0.00"	"0.00000"	"15/140"	"15"	"140"	"996110.144287109"	"HCD"	"MS2"	"24.29096"	"35.5"	"100.000"	"82.3191"	"28463"	"28463"	"28444"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.8"	""	"30.3"	""	"35.3"	""	"85.9"	""	"71.7"	"65.6"	""	"1101"	"50"	"37.000"	"30.000"	"0.00056722755930311"	"16"	"0"	"1.264E-07"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GDGPVQGVIHFEQK"	"[K].gDGPVQGVIHFEQk.[A]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"P07632"	"Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus OX=10116 GN=Sod1 PE=1 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"657.03546"	"1969.09183"	"1969.09073"	"0.56"	"0.00037"	"12/140"	"12"	"140"	"351660.668701172"	"HCD"	"MS2"	"7.969805"	"17.5"	"100.000"	"82.4960"	"28503"	"28503"	"28476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.1"	""	"18.2"	""	"19.5"	""	"38.5"	""	"36.6"	"32.7"	""	"1110"	"35"	"37.000"	"30.000"	"0.0182092887677781"	"19"	"0"	"8.079E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFVHFETQEAAER"	"[K].gYGFVHFETQEAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.32495"	"1969.96030"	"1969.96056"	"-0.13"	"-0.00009"	"14/134"	"14"	"134"	"528265.604919434"	"HCD"	"MS2"	"21.78266"	"14.9"	"100.000"	"75.7496"	"25803"	"25803"	"25777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.8"	""	"15.8"	""	"20.3"	""	"25.1"	""	"31.1"	"30.8"	""	"803"	"43"	"36.000"	"29.000"	"0.00204496344729464"	"15"	"0"	"3.136E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGFVHFETQEAAER"	"[K].gYGFVHFETQEAAER.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"Q9EPH8"	"Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"657.32562"	"1969.96231"	"1969.96056"	"0.89"	"0.00059"	"13/134"	"13"	"134"	"432018.04107666"	"HCD"	"MS2"	"18.22"	"11.8"	"100.000"	"75.6102"	"25715"	"25715"	"25693"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"14.4"	""	"16.5"	""	"22.4"	""	"23.9"	"20.2"	""	"824"	"30"	"36.000"	"29.000"	"0.0416770735155078"	"14"	"0"	"3.753E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLHNEDQMAVEK"	"[R].wLHNEDQmAVEk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.67700"	"1974.01645"	"1974.01552"	"0.47"	"0.00031"	"12/116"	"12"	"116"	"804206.021484375"	"HCD"	"MS2"	"15.15058"	"33.4"	"100.000"	"57.5117"	"18367"	"18367"	"18346"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"40.3"	""	"32.5"	""	"37.6"	""	"82.3"	"1.0"	"74.2"	"49.2"	""	"1173"	"46"	"37.000"	"30.000"	"0.00146983307690334"	"15"	"0"	"4.584E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLHNEDQMAVEK"	"[R].wLHNEDQmAVEk.[L]"	"N-Term(TMT6plex); M8(Oxidation); K12(TMT6plex)"	"1"	"1"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"Q9EQS0"	"Transaldolase OS=Rattus norvegicus OX=10116 GN=Taldo1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"658.67719"	"1974.01700"	"1974.01552"	"0.75"	"0.00049"	"12/116"	"12"	"116"	"847597.13671875"	"HCD"	"MS2"	"19.72721"	"34.5"	"100.000"	"57.2330"	"18289"	"18289"	"18263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.5"	""	"34.8"	""	"35.6"	""	"79.6"	"1.7"	"71.3"	"58.2"	""	"1164"	"38"	"37.000"	"30.000"	"0.0101140008233214"	"15"	"0"	"4.184E-05"	"0.732"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPVEGESELVTAAK"	"[K].sVPVEGESELVTAAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"987.56097"	"1974.11467"	"1974.11594"	"-0.64"	"-0.00064"	"4/134"	"4"	"134"	"75878.4852294922"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"94.2561"	"33238"	"33238"	"33211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.7"	""	"5.9"	""	"6.6"	""	"7.3"	""	"9.8"	"10.6"	""	"1025"	"3"	"37.000"	"30.000"	"26.7112289441354"	"13"	"0.006198"	"0.07552"	"0.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPVEGESELVTAAK"	"[K].sVPVEGESELVTAAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"658.71021"	"1974.11606"	"1974.11594"	"0.06"	"0.00004"	"13/134"	"13"	"134"	"1056336.98858643"	"HCD"	"MS2"	"16.06861"	"26.3"	"100.000"	"94.2070"	"33253"	"33253"	"33232"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"31.5"	""	"31.6"	""	"50.7"	"0.8"	"47.4"	"54.9"	""	"1024"	"54"	"37.000"	"30.000"	"0.000210993929777833"	"22"	"0"	"9.335E-08"	"1.277"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPVEGESELVTAAK"	"[K].sVPVEGESELVTAAk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"P41542"	"General vesicular transport factor p115 OS=Rattus norvegicus OX=10116 GN=Uso1 PE=1 SV=1"	"0"	"3"	"3"	"0.8929"	"0.0000"	"1"	"1"	"1"	"658.71021"	"1974.11606"	"1974.11594"	"0.06"	"0.00004"	"13/134"	"13"	"134"	"1208896.83898926"	"HCD"	"MS2"	"14.0825"	"29.9"	"100.000"	"94.2377"	"33230"	"33230"	"33211"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"30.8"	""	"43.7"	""	"49.9"	""	"58.5"	"65.6"	""	"1024"	"56"	"37.000"	"30.000"	"0.000139723662479772"	"22"	"0"	"3.798E-08"	"1.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPESNTAGMDIFAK"	"[K].hPESNTAGMDIFAk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"659.34918"	"1976.03299"	"1976.03117"	"0.92"	"0.00061"	"11/136"	"11"	"136"	"500219.424865723"	"HCD"	"MS2"	"28.90852"	"22.6"	"100.000"	"75.9592"	"25888"	"25888"	"25865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.5"	""	"27.2"	""	"29.6"	""	"32.0"	""	"49.0"	"43.6"	""	"1306"	"25"	"38.000"	"31.000"	"0.21573131029704"	"14"	"9.9E-05"	"0.001001"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPESNTAGMDIFAK"	"[K].hPESNTAGMDIFAk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"659.34930"	"1976.03336"	"1976.03117"	"1.11"	"0.00073"	"11/136"	"11"	"136"	"281974.057495117"	"HCD"	"MS2"	"9.653246"	"15.0"	"100.000"	"76.0780"	"25905"	"25905"	"25877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"18.5"	""	"21.6"	""	"21.0"	"2.3"	"33.9"	"28.2"	""	"1306"	"35"	"38.000"	"31.000"	"0.0214246226402867"	"16"	"0"	"0.0001949"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGNPNGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.0455"	"0.0000"	"1"	"1"	"1"	"659.35046"	"1976.03684"	"1976.03903"	"-1.11"	"-0.00073"	"7/130"	"7"	"130"	"547770.130432129"	"HCD"	"MS2"	"19.73804"	"23.2"	"100.000"	"78.6119"	"26956"	"26956"	"26935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.3"	""	"31.5"	""	"33.1"	""	"32.1"	"1.3"	"41.3"	"43.4"	""	"1331"	"22"	"38.000"	"31.000"	"0.471137919507644"	"23"	"0.0001686"	"0.001633"	"0.404"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGnPNGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N3(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	""	"0.0455"	"2"	"2"	"2"	"659.35046"	"1976.03684"	"1976.03903"	"-1.11"	"-0.00073"	"7/130"	"7"	"130"	"547770.130432129"	"HCD"	"MS2"	"19.73804"	"23.2"	"100.000"	"78.6119"	"26956"	"26956"	"26935"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.3"	""	"31.5"	""	"33.1"	""	"32.1"	"1.3"	"41.3"	"43.4"	""	"1331"	"21"	"38.000"	"31.000"	"0.505997137303691"	"23"	"0.0001991"	"0.003462"	"0.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGNPNGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.2308"	"0.0000"	"1"	"1"	"1"	"659.35083"	"1976.03794"	"1976.03903"	"-0.55"	"-0.00036"	"10/130"	"10"	"130"	"412706.982055664"	"HCD"	"MS2"	"32.87403"	"18.8"	"100.000"	"78.2755"	"26819"	"26819"	"26797"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.6"	""	"28.6"	""	"20.1"	""	"24.9"	""	"37.1"	"35.3"	""	"1334"	"13"	"38.000"	"31.000"	"3.46837329687855"	"14"	"0.0001991"	"0.005723"	"0.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGnPNGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N3(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"659.35089"	"1976.03812"	"1976.03903"	"-0.46"	"-0.00030"	"6/130"	"6"	"130"	"636855.393615723"	"HCD"	"MS2"	"31.93744"	"25.1"	"100.000"	"78.2618"	"26787"	"26787"	"26758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.0"	""	"31.7"	""	"32.7"	""	"36.4"	""	"47.8"	"45.5"	""	"1333"	"12"	"38.000"	"31.000"	"4.25402613546001"	"14"	"0.0001991"	"0.002526"	"0.365"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGNPNGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"2"	"2"	"659.35089"	"1976.03812"	"1976.03903"	"-0.46"	"-0.00030"	"6/130"	"6"	"130"	"636855.393615723"	"HCD"	"MS2"	"31.93744"	"25.1"	"100.000"	"78.2618"	"26787"	"26787"	"26758"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.0"	""	"31.7"	""	"32.7"	""	"36.4"	""	"47.8"	"45.5"	""	"1333"	"12"	"38.000"	"31.000"	"4.25402613546001"	"14"	"0.0001991"	"0.001993"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"659.35858"	"1976.06119"	"1976.06502"	"-1.94"	"-0.00128"	"14/152"	"14"	"152"	"669745.95300293"	"HCD"	"MS2"	"35.36523"	"13.1"	"100.000"	"99.3276"	"35291"	"35291"	"35270"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.9"	""	"18.2"	""	"20.3"	""	"22.5"	"1.5"	"24.4"	"24.3"	""	"1321"	"38"	"38.000"	"31.000"	"0.0104682195362057"	"19"	"0"	"2.574E-05"	"0.775"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"2"	"2"	"0.7692"	"0.0000"	"1"	"1"	"1"	"988.53436"	"1976.06145"	"1976.06502"	"-1.81"	"-0.00179"	"5/152"	"5"	"152"	"82713.8037719727"	"HCD"	"MS2"	"100"	"3.4"	"100.000"	"99.3771"	"35340"	"35340"	"35319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.4"	""	"5.2"	""	"3.5"	""	"6.5"	""	"7.1"	"6.5"	""	"1324"	"13"	"38.000"	"31.000"	"3.07509112197461"	"17"	"0.001261"	"0.01017"	"0.24"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"988.53497"	"1976.06267"	"1976.06502"	"-1.19"	"-0.00118"	"7/152"	"7"	"152"	"185382.007385254"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"99.3508"	"35300"	"35300"	"35281"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.7"	""	"8.3"	""	"7.7"	""	"13.7"	""	"17.1"	"18.0"	""	"1317"	"24"	"38.000"	"31.000"	"0.287445675530149"	"20"	"0"	"0.0001949"	"0.594"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"659.35938"	"1976.06357"	"1976.06502"	"-0.73"	"-0.00048"	"13/152"	"13"	"152"	"354884.957336426"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"99.6981"	"35469"	"35469"	"35450"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.2"	""	"6.6"	""	"15.0"	""	"19.7"	""	"19.9"	"19.6"	""	"1307"	"34"	"38.000"	"31.000"	"0.026076277369366"	"16"	"0"	"1.89E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"3"	"3"	"0.9429"	"0.0000"	"1"	"1"	"1"	"659.35950"	"1976.06394"	"1976.06502"	"-0.55"	"-0.00036"	"11/152"	"11"	"152"	"384838.237976074"	"HCD"	"MS2"	"14.4663"	"10.9"	"100.000"	"99.6461"	"35420"	"35420"	"35398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.9"	""	"7.9"	""	"18.1"	""	"19.3"	""	"22.3"	"22.7"	""	"1306"	"35"	"38.000"	"31.000"	"0.0192270732687059"	"17"	"0"	"0.0002069"	"0.589"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"659.35986"	"1976.06504"	"1976.06502"	"0.01"	"0.00001"	"15/152"	"15"	"152"	"586240.064819336"	"HCD"	"MS2"	"24.51041"	"10.7"	"100.000"	"99.4003"	"35349"	"35349"	"35330"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"13.3"	""	"10.7"	""	"19.6"	""	"19.5"	"25.1"	""	"1297"	"63"	"38.000"	"31.000"	"2.90342077758371E-05"	"23"	"0"	"1.703E-06"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"2"	"2"	""	"0.0000"	"2"	"2"	"2"	"988.53625"	"1976.06523"	"1976.06502"	"0.11"	"0.00011"	"3/152"	"3"	"152"	"55542.7886352539"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"99.6484"	"35421"	"35421"	"35398"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"2.4"	""	"2.9"	""	"5.1"	""	"3.7"	"3.8"	""	"1296"	"1"	"38.000"	"31.000"	"53.8982923674531"	"13"	"0.00981"	"0.1327"	"0"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAQSDYIPTQQDVLR"	"[R].iAQSDYIPTQQDVLR.[T]"	"N-Term(TMT6plex)"	"1"	"1"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"P04897"	"Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Gnai2 PE=1 SV=3"	"0"	"2"	"2"	"0.6923"	"0.0000"	"1"	"1"	"1"	"988.53705"	"1976.06682"	"1976.06502"	"0.91"	"0.00090"	"4/152"	"4"	"152"	"84726.3501586914"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"99.6659"	"35456"	"35456"	"35440"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.6"	""	"4.7"	""	"3.6"	""	"6.5"	""	"8.8"	"6.8"	""	"1321"	"13"	"38.000"	"31.000"	"3.14682666784977"	"18"	"0.002166"	"0.01977"	"0.18"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGNPnGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.1154"	"0.0000"	"1"	"1"	"1"	"659.67889"	"1977.02213"	"1977.02305"	"-0.46"	"-0.00031"	"11/130"	"11"	"130"	"346550.540405273"	"HCD"	"MS2"	"11.64515"	"14.6"	"100.000"	"83.5661"	"28936"	"28936"	"28921"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"18.8"	""	"17.1"	""	"25.3"	""	"30.4"	"26.6"	""	"1216"	"26"	"37.000"	"30.000"	"0.170178064233769"	"19"	"0.0001991"	"0.002985"	"0.35"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGEGLPHWPK"	"[R].nGNPnGEGLPHWPk.[Y]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K14(TMT6plex)"	"1"	"1"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"P10959"	"Carboxylesterase 1C OS=Rattus norvegicus OX=10116 GN=Ces1c PE=1 SV=3"	"0"	"3"	"3"	"0.0667"	"0.0000"	"1"	"1"	"1"	"659.67993"	"1977.02524"	"1977.02305"	"1.11"	"0.00073"	"10/130"	"10"	"130"	"377630.560180664"	"HCD"	"MS2"	"17.96533"	"17.5"	"100.000"	"83.6530"	"29000"	"29000"	"28980"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"21.5"	""	"24.1"	""	"24.8"	""	"37.6"	"36.4"	""	"1215"	"15"	"37.000"	"30.000"	"1.71611458476129"	"15"	"0.0001991"	"0.00501"	"0.304"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YSGDFGADAQGAMSK"	"[R].ySGDFGADAQGAmSk.[A]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"Q9QZ76"	"Myoglobin OS=Rattus norvegicus OX=10116 GN=Mb PE=1 SV=3"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"660.32373"	"1978.95664"	"1978.95806"	"-0.72"	"-0.00047"	"10/146"	"10"	"146"	"704484.749694824"	"HCD"	"MS2"	"53.1853"	"38.1"	"100.000"	"63.5375"	"20849"	"20849"	"20825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.5"	""	"47.6"	""	"46.3"	""	"53.4"	""	"69.1"	"91.7"	""	"714"	"10"	"35.000"	"28.000"	"3.9234508467741"	"18"	"0.0001991"	"0.002201"	"0.377"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GYGYGQGAGTLSMDK"	"[K].gYGYGQGAGTLSmDk.[G]"	"N-Term(TMT6plex); M13(Oxidation); K15(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"660.33594"	"1978.99326"	"1978.99445"	"-0.60"	"-0.00040"	"10/138"	"10"	"138"	"961155.396362305"	"HCD"	"MS2"	"33.31718"	"42.5"	"100.000"	"63.7500"	"20904"	"20904"	"20882"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.3"	""	"45.5"	""	"51.2"	""	"77.6"	"0.3"	"98.7"	"87.1"	""	"946"	"46"	"36.000"	"29.000"	"0.00116107731711902"	"15"	"0"	"1.08E-06"	"1.058"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYEFSETESMLK"	"[K].sAYEFSETESMLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9706"	"0.0000"	"1"	"1"	"1"	"660.67279"	"1980.00382"	"1980.00362"	"0.10"	"0.00007"	"13/114"	"13"	"114"	"651129.031036377"	"HCD"	"MS2"	"31.1328"	"21.7"	"100.000"	"104.8110"	"37522"	"37522"	"37510"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"24.5"	""	"27.3"	""	"29.0"	""	"48.7"	"41.2"	""	"1076"	"34"	"37.000"	"30.000"	"0.0233228852572491"	"16"	"0"	"1.646E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYEFSETESMLK"	"[K].sAYEFSETESMLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"660.67297"	"1980.00437"	"1980.00362"	"0.38"	"0.00025"	"13/114"	"13"	"114"	"578408.69934082"	"HCD"	"MS2"	"45.84179"	"21.5"	"100.000"	"104.4735"	"37369"	"37369"	"37352"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.9"	""	"25.0"	""	"30.1"	""	"35.5"	"0.6"	"42.0"	"41.3"	""	"1082"	"21"	"37.000"	"30.000"	"0.440755017655274"	"14"	"0"	"7.793E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SAYEFSETESMLK"	"[K].sAYEFSETESMLk.[I]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"990.50592"	"1980.00456"	"1980.00362"	"0.48"	"0.00047"	"4/114"	"4"	"114"	"70183.560546875"	"HCD"	"MS2"	"100"	"6.1"	"100.000"	"104.5779"	"37410"	"37410"	"37387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"8.3"	""	"10.4"	""	"10.9"	""	"11.3"	"7.9"	""	"1082"	"2"	"37.000"	"30.000"	"33.3577896007061"	"13"	"0.001596"	"0.01289"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEQLMASDDFGR"	"[K].ekEQLMASDDFGR.[D]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.01123"	"1984.01914"	"1984.02100"	"-0.94"	"-0.00062"	"11/136"	"11"	"136"	"1079508.43182373"	"HCD"	"MS2"	"21.91942"	"59.2"	"100.000"	"67.0259"	"22231"	"22231"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.6"	""	"82.8"	""	"70.9"	""	"75.2"	"2.1"	"103.6"	"120.6"	""	"1158"	"29"	"37.000"	"30.000"	"0.080663778890533"	"14"	"0"	"3.239E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EKEQLMASDDFGR"	"[K].ekEQLMASDDFGR.[D]"	"N-Term(TMT6plex); K2(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.01227"	"1984.02225"	"1984.02100"	"0.63"	"0.00042"	"8/136"	"8"	"136"	"741972.714111328"	"HCD"	"MS2"	"12.93598"	"46.8"	"100.000"	"67.0269"	"22263"	"22263"	"22247"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"83.8"	""	"65.7"	""	"55.1"	""	"53.0"	""	"89.5"	"97.6"	""	"1169"	"18"	"37.000"	"30.000"	"0.92211378713927"	"14"	"0.002875"	"0.03088"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEASDYLELDTIK"	"[K].eEASDYLELDTIk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.7857"	"0.0000"	"1"	"1"	"1"	"662.02283"	"1984.05393"	"1984.05267"	"0.63"	"0.00042"	"6/116"	"6"	"116"	"172965.885375977"	"HCD"	"MS2"	"6.916286"	"8.0"	"100.000"	"110.2491"	"39621"	"39621"	"39597"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"9.4"	""	"9.9"	""	"10.3"	""	"14.5"	"20.4"	""	"1224"	"14"	"37.000"	"30.000"	"2.4874331744911"	"16"	"0.001951"	"0.01633"	"0.197"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEASDYLELDTIK"	"[K].eEASDYLELDTIk.[N]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"Q66HD0"	"Endoplasmin OS=Rattus norvegicus OX=10116 GN=Hsp90b1 PE=1 SV=2"	"0"	"3"	"3"	"0.4828"	"0.0000"	"1"	"1"	"1"	"662.02301"	"1984.05448"	"1984.05267"	"0.91"	"0.00060"	"8/116"	"8"	"116"	"220079.591430664"	"HCD"	"MS2"	"4.506433"	"8.5"	"100.000"	"110.0761"	"39537"	"39537"	"39519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.6"	""	"6.8"	""	"6.8"	""	"15.9"	""	"16.0"	"22.1"	""	"1248"	"29"	"37.000"	"30.000"	"0.0721414039127869"	"30"	"0.0003294"	"0.006175"	"0.285"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LVAGVMGQNEPDQGGQR"	"[R].lVAGVMGQNEPDQGGQR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"O70351"	"3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus OX=10116 GN=Hsd17b10 PE=1 SV=3"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"662.34149"	"1985.00992"	"1985.00719"	"1.38"	"0.00091"	"11/150"	"11"	"150"	"292517.691833496"	"HCD"	"MS2"	"0"	"13.3"	"100.000"	"70.6218"	"23691"	"23691"	"23668"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"19.5"	""	"19.4"	""	"20.6"	""	"26.4"	"24.0"	""	"1142"	"36"	"37.000"	"30.000"	"0.0146095254142312"	"16"	"0"	"8.396E-06"	"0.875"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IQELGTLDTHDSLGTR"	"[R].iQELGTLDTHDSLGTR.[H]"	"N-Term(TMT6plex)"	"1"	"1"	"Q4V7F5"	"PIH1 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Pih1d1 PE=1 SV=1"	"Q4V7F5"	"PIH1 domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Pih1d1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.35767"	"1985.05844"	"1985.05010"	"4.20"	"0.00278"	"7/172"	"7"	"172"	"116830.323913574"	"HCD"	"MS2"	"0"	"7.2"	"100.000"	"87.9269"	"30724"	"30724"	"30694"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"7.9"	""	"8.7"	""	"11.5"	""	"11.8"	"18.9"	""	"1164"	"7"	"37.000"	"30.000"	"10.5906589971101"	"13"	"0.003043"	"0.03261"	"0.134"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEDHLAVK"	"[K].sLTNDWEDHLAVk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.69421"	"1986.06809"	"1986.06966"	"-0.79"	"-0.00052"	"12/128"	"12"	"128"	"1816564.82843018"	"HCD"	"MS2"	"12.67487"	"63.4"	"100.000"	"97.6962"	"34632"	"34632"	"34615"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"105.3"	""	"64.8"	""	"79.9"	""	"107.3"	""	"119.1"	"129.0"	""	"1179"	"28"	"37.000"	"30.000"	"0.0951664369249213"	"14"	"0"	"4.03E-05"	"0.735"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEDHLAVK"	"[K].sLTNDWEDHLAVk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.69476"	"1986.06974"	"1986.06966"	"0.04"	"0.00002"	"17/128"	"17"	"128"	"1976843.23876953"	"HCD"	"MS2"	"40.92759"	"64.9"	"100.000"	"97.7378"	"34680"	"34680"	"34663"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"116.6"	""	"70.2"	""	"79.0"	""	"104.6"	"0.8"	"125.1"	"118.3"	""	"1163"	"45"	"37.000"	"30.000"	"0.00166551948950068"	"15"	"0"	"1.787E-07"	"1.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEDHLAVK"	"[K].sLTNDWEDHLAVk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"662.69507"	"1986.07065"	"1986.06966"	"0.50"	"0.00033"	"14/128"	"14"	"128"	"1525344.81781006"	"HCD"	"MS2"	"20.39787"	"51.2"	"100.000"	"97.6220"	"34601"	"34601"	"34583"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"88.0"	""	"58.9"	""	"63.1"	""	"77.3"	""	"98.2"	"99.9"	""	"1159"	"36"	"37.000"	"30.000"	"0.0140298633258362"	"15"	"0"	"4.907E-06"	"0.923"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPVTSFTNEDLLHGR"	"[R].aTPVTSFTNEDLLHGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.01886"	"1987.04203"	"1987.04462"	"-1.31"	"-0.00086"	"17/152"	"17"	"152"	"428192.367248535"	"HCD"	"MS2"	"16.59417"	"10.3"	"100.000"	"89.1175"	"31167"	"31167"	"31146"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.1"	""	"13.5"	""	"14.4"	""	"16.5"	""	"22.4"	"18.5"	""	"1194"	"58"	"37.000"	"30.000"	"9.37506594187131E-05"	"16"	"0"	"2.077E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPVTSFTNEDLLHGR"	"[R].aTPVTSFTNEDLLHGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.01923"	"1987.04312"	"1987.04462"	"-0.75"	"-0.00050"	"11/152"	"11"	"152"	"689125.302429199"	"HCD"	"MS2"	"14.02453"	"13.3"	"100.000"	"89.0312"	"31171"	"31171"	"31156"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.3"	""	"16.0"	""	"17.3"	""	"17.7"	""	"30.2"	"24.5"	""	"1197"	"70"	"37.000"	"30.000"	"5.49622058995422E-06"	"17"	"0"	"2.351E-09"	"1.606"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPVTSFTNEDLLHGR"	"[R].aTPVTSFTNEDLLHGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.01941"	"1987.04367"	"1987.04462"	"-0.48"	"-0.00032"	"13/152"	"13"	"152"	"198106.084472656"	"HCD"	"MS2"	"4.149375"	"7.2"	"100.000"	"89.7090"	"31402"	"31402"	"31384"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"7.3"	""	"10.2"	""	"15.6"	""	"13.8"	"13.9"	""	"1203"	"48"	"37.000"	"30.000"	"0.000995945633026921"	"15"	"0"	"3.181E-05"	"0.756"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPVTSFTNEDLLHGR"	"[R].aTPVTSFTNEDLLHGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.01953"	"1987.04404"	"1987.04462"	"-0.29"	"-0.00019"	"12/152"	"12"	"152"	"1351138.24804688"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"89.4109"	"31283"	"31283"	"31272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"15.1"	""	"8.6"	""	"23.1"	""	"21.1"	"26.2"	""	"1199"	"79"	"37.000"	"30.000"	"7.47806416788644E-07"	"17"	"0"	"7.717E-08"	"1.294"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATPVTSFTNEDLLHGR"	"[R].aTPVTSFTNEDLLHGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"Q00657"	"Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus OX=10116 GN=Cspg4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.02014"	"1987.04587"	"1987.04462"	"0.63"	"0.00042"	"11/152"	"11"	"152"	"1057654.32507324"	"HCD"	"MS2"	"0.8121819"	"10.5"	"100.000"	"89.3361"	"31293"	"31293"	"31280"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"15.5"	""	"14.8"	""	"16.1"	""	"23.2"	"19.3"	""	"1196"	"72"	"37.000"	"30.000"	"4.1658265543824E-06"	"17"	"0"	"1.55E-07"	"1.232"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEDHLAVK"	"[K].sLTnDWEDHLAVk.[H]"	"N-Term(TMT6plex); N4(Deamidated); K13(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.02246"	"1987.05283"	"1987.05368"	"-0.43"	"-0.00028"	"11/128"	"11"	"128"	"229278.424499512"	"HCD"	"MS2"	"35.38997"	"10.3"	"100.000"	"100.5489"	"35816"	"35816"	"35785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.2"	""	"12.4"	""	"17.9"	""	"20.8"	""	"15.6"	"16.9"	""	"1217"	"21"	"37.000"	"30.000"	"0.473435241307721"	"14"	"0.001103"	"0.009101"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEPEWAAAATEVK"	"[K].nLEPEWAAAATEVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"994.04828"	"1987.08928"	"1987.09006"	"-0.39"	"-0.00039"	"5/148"	"5"	"148"	"97261.660949707"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"110.0340"	"39534"	"39534"	"39512"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.5"	""	"5.7"	""	"3.8"	""	"7.2"	""	"12.1"	"8.9"	""	"1270"	"12"	"38.000"	"31.000"	"3.66246704254079"	"14"	"0.001596"	"0.01292"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEPEWAAAATEVK"	"[K].nLEPEWAAAATEVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"663.03491"	"1987.09018"	"1987.09006"	"0.06"	"0.00004"	"15/148"	"15"	"148"	"614495.277282715"	"HCD"	"MS2"	"0"	"16.4"	"100.000"	"109.9510"	"39500"	"39500"	"39485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"12.0"	""	"17.7"	""	"33.3"	""	"30.9"	"35.8"	""	"1266"	"54"	"38.000"	"31.000"	"0.000257871715850004"	"20"	"0"	"5.928E-07"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEPEWAAAATEVK"	"[K].nLEPEWAAAATEVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"994.04913"	"1987.09099"	"1987.09006"	"0.47"	"0.00046"	"6/148"	"6"	"148"	"94745.775390625"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"109.8371"	"39443"	"39443"	"39418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.0"	""	"6.0"	""	"8.2"	""	"9.9"	""	"7.3"	"12.3"	""	"1265"	"2"	"38.000"	"31.000"	"38.7311622765919"	"13"	"0.002189"	"0.02024"	"0.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEPEWAAAATEVK"	"[K].nLEPEWAAAATEVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"0.9516"	"0.0000"	"1"	"1"	"1"	"663.03534"	"1987.09146"	"1987.09006"	"0.71"	"0.00047"	"15/148"	"15"	"148"	"604680.446411133"	"HCD"	"MS2"	"19.47046"	"14.1"	"100.000"	"109.7311"	"39400"	"39400"	"39385"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.3"	""	"16.6"	""	"14.8"	""	"28.2"	""	"27.8"	"25.6"	""	"1268"	"62"	"38.000"	"31.000"	"4.00949113772523E-05"	"20"	"0"	"2.486E-07"	"1.19"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NLEPEWAAAATEVK"	"[K].nLEPEWAAAATEVk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"Q63081"	"Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"663.03613"	"1987.09385"	"1987.09006"	"1.90"	"0.00126"	"10/148"	"10"	"148"	"227006.704528809"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"110.0109"	"39511"	"39511"	"39499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"11.1"	""	"8.2"	""	"16.0"	""	"17.9"	"15.9"	""	"1249"	"24"	"37.000"	"30.000"	"0.235251522465451"	"14"	"0.0001991"	"0.002072"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASAELALGENSEVLK"	"[K].aSAELALGENSEVLk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"P00507"	"Aspartate aminotransferase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Got2 PE=1 SV=2"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"663.71448"	"1989.12888"	"1989.12684"	"1.02"	"0.00068"	"13/142"	"13"	"142"	"257438.984924316"	"HCD"	"MS2"	"13.60695"	"9.3"	"100.000"	"100.9345"	"35972"	"35972"	"35953"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"12.9"	""	"12.5"	""	"15.2"	""	"18.2"	"18.1"	""	"1015"	"34"	"37.000"	"30.000"	"0.020485003693106"	"22"	"0"	"1.326E-05"	"0.834"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TGQEVVFVAEPDNK"	"[K].tGQEVVFVAEPDNk.[N]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"P25235"	"Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 OS=Rattus norvegicus OX=10116 GN=Rpn2 PE=2 SV=2"	"0"	"3"	"3"	"0.7750"	"0.0000"	"1"	"1"	"1"	"664.36633"	"1991.08445"	"1991.08498"	"-0.27"	"-0.00018"	"12/148"	"12"	"148"	"402796.652832031"	"HCD"	"MS2"	"7.702382"	"14.6"	"100.000"	"88.2970"	"30835"	"30835"	"30812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"16.8"	""	"19.8"	""	"27.9"	"0.9"	"27.2"	"29.1"	""	"1249"	"40"	"37.000"	"30.000"	"0.00603298773929139"	"24"	"0"	"1.714E-06"	"1.017"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EGVCPEGSIDSAPVK"	"[R].eGVcPEGSIDSAPVk.[W]"	"N-Term(TMT6plex); C4(Methylthio); K15(TMT6plex)"	"1"	"1"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"P12346"	"Serotransferrin OS=Rattus norvegicus OX=10116 GN=Tf PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.67731"	"1992.01737"	"1992.01822"	"-0.43"	"-0.00028"	"10/132"	"10"	"132"	"243503.377563477"	"HCD"	"MS2"	"17.35479"	"9.6"	"100.000"	"95.9158"	"33944"	"33944"	"33922"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"10.3"	""	"14.8"	""	"16.3"	""	"16.2"	"22.3"	""	"1187"	"41"	"37.000"	"30.000"	"0.0047034953964016"	"15"	"9.9E-05"	"0.0005395"	"0.503"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPESNTAGMDIFAK"	"[K].hPESNTAGmDIFAk.[F]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"0.9833"	"0.0000"	"1"	"1"	"1"	"664.67999"	"1992.02542"	"1992.02608"	"-0.33"	"-0.00022"	"14/136"	"14"	"136"	"1189755.31573486"	"HCD"	"MS2"	"6.870383"	"36.4"	"100.000"	"53.3982"	"16734"	"16734"	"16712"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.8"	""	"46.4"	""	"55.3"	""	"81.0"	""	"59.8"	"62.7"	""	"1213"	"60"	"37.000"	"30.000"	"5.48063405812576E-05"	"17"	"0"	"2.555E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPESNTAGMDIFAK"	"[K].hPESNTAGmDIFAk.[F]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"664.68030"	"1992.02634"	"1992.02608"	"0.13"	"0.00009"	"14/136"	"14"	"136"	"1511660.79431152"	"HCD"	"MS2"	"4.907525"	"51.6"	"100.000"	"53.0692"	"16600"	"16600"	"16577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"65.7"	""	"69.8"	""	"72.2"	""	"98.6"	"0.1"	"94.9"	"87.6"	""	"1224"	"37"	"37.000"	"30.000"	"0.0135129889660756"	"23"	"0"	"1.939E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPESNTAGMDIFAK"	"[K].hPESNTAGmDIFAk.[F]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"664.68036"	"1992.02652"	"1992.02608"	"0.22"	"0.00015"	"14/136"	"14"	"136"	"1251518.10400391"	"HCD"	"MS2"	"2.501571"	"42.8"	"100.000"	"53.7250"	"16834"	"16834"	"16809"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.1"	""	"46.5"	""	"64.3"	""	"80.6"	""	"82.8"	"72.9"	""	"1225"	"40"	"37.000"	"30.000"	"0.00653290124253533"	"15"	"0"	"7.436E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HPESNTAGMDIFAK"	"[K].hPESNTAGmDIFAk.[F]"	"N-Term(TMT6plex); M9(Oxidation); K14(TMT6plex)"	"1"	"1"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"Q9Z0W7"	"Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"664.68054"	"1992.02707"	"1992.02608"	"0.50"	"0.00033"	"15/136"	"15"	"136"	"1751153.41906738"	"HCD"	"MS2"	"18.27422"	"54.5"	"100.000"	"53.4120"	"16706"	"16706"	"16682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"74.8"	""	"61.8"	""	"78.0"	""	"113.2"	"0.7"	"96.2"	"91.5"	""	"1224"	"66"	"37.000"	"30.000"	"1.48166977660254E-05"	"20"	"0"	"8.813E-07"	"1.077"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.9180"	"0.0000"	"1"	"1"	"1"	"996.52771"	"1992.04814"	"1992.04870"	"-0.28"	"-0.00028"	"9/136"	"9"	"136"	"407675.733215332"	"HCD"	"MS2"	"7.452507"	"13.1"	"100.000"	"110.3877"	"39664"	"39664"	"39639"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.4"	""	"17.4"	""	"23.0"	""	"16.2"	""	"16.3"	"25.4"	""	"1271"	"61"	"38.000"	"31.000"	"4.96724469815883E-05"	"21"	"0"	"4.013E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.9556"	"0.0000"	"1"	"1"	"1"	"664.68768"	"1992.04850"	"1992.04870"	"-0.10"	"-0.00007"	"16/136"	"16"	"136"	"1935965.48242188"	"HCD"	"MS2"	"4.346346"	"12.3"	"100.000"	"110.5428"	"39741"	"39741"	"39724"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.5"	""	"15.6"	""	"18.3"	""	"19.8"	""	"23.9"	"24.3"	""	"1272"	"91"	"38.000"	"31.000"	"5.66835596653063E-08"	"23"	"0"	"4.091E-08"	"1.351"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"996.52802"	"1992.04875"	"1992.04870"	"0.03"	"0.00003"	"11/136"	"11"	"136"	"328103.395751953"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"110.5219"	"39732"	"39732"	"39708"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"13.4"	""	"19.3"	""	"18.2"	""	"19.1"	"19.5"	""	"1290"	"35"	"38.000"	"31.000"	"0.0218554480709785"	"19"	"0"	"2.551E-05"	"0.776"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GLVYETSVLDPDEGIR"	"[K].gLVYETSVLDPDEGIR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"Q8VHF5"	"Citrate synthase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Cs PE=1 SV=1"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"664.68787"	"1992.04905"	"1992.04870"	"0.17"	"0.00011"	"14/136"	"14"	"136"	"2310080.9697876"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"110.4063"	"39672"	"39672"	"39655"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.6"	""	"19.4"	""	"23.3"	""	"19.3"	""	"29.3"	"29.8"	""	"1280"	"63"	"38.000"	"31.000"	"3.34333560959436E-05"	"19"	"0"	"6.16E-08"	"1.314"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.7021"	"0.0000"	"1"	"1"	"1"	"664.68915"	"1992.05289"	"1992.05374"	"-0.42"	"-0.00028"	"16/132"	"16"	"132"	"682259.373962402"	"HCD"	"MS2"	"0"	"26.9"	"100.000"	"66.2826"	"21933"	"21933"	"21909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.5"	""	"34.7"	""	"31.7"	""	"42.5"	"2.3"	"57.4"	"48.6"	""	"1309"	"47"	"38.000"	"31.000"	"0.0012528805029263"	"29"	"0"	"2.534E-06"	"0.982"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.9231"	"0.0000"	"1"	"1"	"1"	"996.53027"	"1992.05327"	"1992.05374"	"-0.23"	"-0.00023"	"8/132"	"8"	"132"	"104590.598937988"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"65.9344"	"21824"	"21824"	"21798"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.0"	""	"5.3"	""	"6.8"	""	"11.4"	""	"14.4"	"16.7"	""	"1304"	"13"	"38.000"	"31.000"	"3.13507255189223"	"15"	"0.0001991"	"0.002903"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"996.53033"	"1992.05339"	"1992.05374"	"-0.17"	"-0.00017"	"7/132"	"7"	"132"	"112644.538452148"	"HCD"	"MS2"	"0"	"9.6"	"100.000"	"66.1472"	"21878"	"21878"	"21849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"14.0"	""	"10.1"	""	"10.2"	""	"18.5"	"22.3"	""	"1308"	"18"	"38.000"	"31.000"	"1.11577788240804"	"18"	"0.0001686"	"0.001551"	"0.409"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"664.68933"	"1992.05344"	"1992.05374"	"-0.15"	"-0.00010"	"15/132"	"15"	"132"	"1129522.83532715"	"HCD"	"MS2"	"0"	"43.1"	"100.000"	"66.2287"	"21944"	"21944"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"66.3"	"2.5"	"49.4"	""	"49.0"	""	"74.0"	"0.4"	"78.0"	"89.4"	""	"1307"	"46"	"38.000"	"31.000"	"0.00163774239685649"	"24"	"0"	"1.339E-05"	"0.833"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"664.68939"	"1992.05362"	"1992.05374"	"-0.06"	"-0.00004"	"12/132"	"12"	"132"	"1183520.81292725"	"HCD"	"MS2"	"21.36615"	"41.0"	"100.000"	"65.9032"	"21778"	"21778"	"21753"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"76.4"	""	"46.2"	""	"45.8"	""	"63.9"	""	"81.3"	"75.0"	""	"1308"	"88"	"38.000"	"31.000"	"9.36650886124898E-08"	"26"	"0"	"1.275E-08"	"1.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"664.68970"	"1992.05454"	"1992.05374"	"0.40"	"0.00027"	"10/132"	"10"	"132"	"743043.035461426"	"HCD"	"MS2"	"30.29033"	"28.6"	"100.000"	"65.8583"	"21793"	"21793"	"21769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.9"	""	"30.1"	""	"26.9"	""	"47.5"	""	"51.7"	"63.6"	""	"1302"	"64"	"38.000"	"31.000"	"2.53268389391277E-05"	"26"	"0"	"1.579E-06"	"1.024"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ATEEPSGTGSDELIK"	"[R].aTEEPSGTGSDELIk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"P85125"	"Caveolae-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Cavin1 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"996.53094"	"1992.05461"	"1992.05374"	"0.44"	"0.00044"	"4/132"	"4"	"132"	"66602.0957641602"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"65.8318"	"21749"	"21749"	"21723"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"6.6"	""	"2.9"	""	"10.5"	""	"7.0"	"8.1"	""	"1302"	"6"	"38.000"	"31.000"	"16.1280175951927"	"13"	"0.005266"	"0.06621"	"0.068"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"665.02405"	"1993.05759"	"1993.06022"	"-1.32"	"-0.00088"	"13/152"	"13"	"152"	"749693.958190918"	"HCD"	"MS2"	"48.66361"	"41.2"	"100.000"	"56.0378"	"17806"	"17806"	"17787"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.9"	""	"45.1"	""	"58.9"	""	"54.2"	"1.5"	"83.9"	"76.4"	""	"1221"	"40"	"37.000"	"30.000"	"0.00651156932011072"	"20"	"0"	"3.842E-05"	"0.739"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.02405"	"1993.05759"	"1993.06022"	"-1.32"	"-0.00088"	"13/152"	"13"	"152"	"4477755.27081299"	"HCD"	"MS2"	"0"	"141.5"	"100.000"	"55.7445"	"17689"	"17689"	"17678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"199.1"	""	"136.0"	""	"154.3"	""	"240.9"	""	"336.2"	"288.9"	""	"1221"	"31"	"37.000"	"30.000"	"0.0495091725819769"	"15"	"0"	"8.181E-07"	"1.083"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"665.02411"	"1993.05777"	"1993.06022"	"-1.23"	"-0.00082"	"8/152"	"8"	"152"	"5892957.21380615"	"HCD"	"MS2"	"0"	"175.6"	"100.000"	"55.7966"	"17678"	"17678"	"17662"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"278.1"	""	"153.3"	""	"194.5"	""	"304.6"	"4.0"	"384.7"	"348.1"	""	"1226"	"43"	"37.000"	"30.000"	"0.0029138049350294"	"16"	"0"	"4.316E-08"	"1.346"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"665.02417"	"1993.05796"	"1993.06022"	"-1.14"	"-0.00075"	"14/152"	"14"	"152"	"3860819.93579102"	"HCD"	"MS2"	"0"	"112.7"	"100.000"	"56.1541"	"17820"	"17820"	"17808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"173.8"	""	"93.6"	""	"126.0"	""	"183.5"	"1.4"	"252.0"	"240.5"	""	"1228"	"52"	"37.000"	"30.000"	"0.000406600933272882"	"16"	"0"	"1.369E-08"	"1.449"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"665.02466"	"1993.05942"	"1993.06022"	"-0.40"	"-0.00027"	"9/152"	"9"	"152"	"6668689.23596191"	"HCD"	"MS2"	"6.22506"	"195.4"	"100.000"	"55.4490"	"17571"	"17571"	"17553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"301.6"	""	"177.5"	""	"213.4"	""	"332.3"	"4.4"	"440.4"	"386.2"	""	"1235"	"49"	"37.000"	"30.000"	"0.000784579509966274"	"16"	"0"	"4.666E-08"	"1.339"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"499.02048"	"1993.06008"	"1993.06022"	"-0.07"	"-0.00003"	"9/152"	"9"	"152"	"1736296.61816406"	"HCD"	"MS2"	"0"	"44.1"	"100.000"	"55.6048"	"17634"	"17634"	"17615"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"69.5"	""	"40.0"	""	"51.6"	""	"69.7"	"1.6"	"98.8"	"87.6"	""	"1222"	"13"	"37.000"	"30.000"	"2.7992469278258"	"13"	"0.003749"	"0.04033"	"0.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RDGVLDSVTDQDSK"	"[R].rDGVLDSVTDQDSk.[D]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"1"	"4"	"4"	"0.5000"	"0.0000"	"1"	"1"	"1"	"499.02075"	"1993.06118"	"1993.06022"	"0.48"	"0.00024"	"10/152"	"10"	"152"	"2064300.99981689"	"HCD"	"MS2"	"0"	"46.7"	"100.000"	"55.8905"	"17716"	"17716"	"17701"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"72.1"	""	"45.5"	""	"48.6"	""	"84.1"	"1.5"	"99.8"	"92.1"	""	"1223"	"24"	"37.000"	"30.000"	"0.272518795895073"	"26"	"0"	"0.0003574"	"0.54"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSmSSTLSLTk.[VA]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8958"	"0.0000"	"1"	"1"	"1"	"665.68231"	"1995.03238"	"1995.03564"	"-1.63"	"-0.00109"	"13/128"	"13"	"128"	"593889.938171387"	"HCD"	"MS2"	"24.04555"	"21.3"	"100.000"	"78.5036"	"26912"	"26912"	"26887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.0"	""	"18.7"	""	"17.8"	""	"51.8"	""	"49.4"	"47.2"	""	"1215"	"48"	"37.000"	"30.000"	"0.0009784672233708"	"21"	"0"	"3.813E-06"	"0.946"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSmSSTLSLTk.[VA]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"998.02081"	"1995.03435"	"1995.03564"	"-0.65"	"-0.00065"	"5/128"	"5"	"128"	"83160.8952026367"	"HCD"	"MS2"	"26.9027"	"6.7"	"100.000"	"78.4876"	"26879"	"26879"	"26852"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.9"	""	"4.5"	""	"5.1"	""	"17.7"	""	"21.7"	"12.5"	""	"1198"	"6"	"37.000"	"30.000"	"13.785636486277"	"16"	"0.00714"	"0.09139"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSmSSTLSLTk.[VA]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.5938"	"0.0000"	"1"	"1"	"1"	"665.68298"	"1995.03440"	"1995.03564"	"-0.63"	"-0.00042"	"14/128"	"14"	"128"	"1252122.46295166"	"HCD"	"MS2"	"12.36913"	"38.8"	"100.000"	"78.7735"	"26995"	"26995"	"26977"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.4"	""	"36.6"	""	"39.0"	""	"87.2"	"0.8"	"89.8"	"79.9"	""	"1198"	"32"	"37.000"	"30.000"	"0.0419205355605362"	"27"	"0"	"6.799E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSmSSTLSLTk.[VA]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9434"	"0.0000"	"1"	"1"	"1"	"665.68317"	"1995.03495"	"1995.03564"	"-0.35"	"-0.00023"	"15/128"	"15"	"128"	"842134.696899414"	"HCD"	"MS2"	"20.72386"	"29.4"	"100.000"	"78.4137"	"26849"	"26849"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.4"	""	"24.5"	""	"29.2"	""	"67.7"	"1.5"	"67.8"	"65.6"	""	"1203"	"53"	"37.000"	"30.000"	"0.00028005003525406"	"19"	"0"	"1.242E-06"	"1.046"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSTYSMSSTLSLTK"	"[K].dSTYSmSSTLSLTk.[VA]"	"N-Term(TMT6plex); M6(Oxidation); K14(TMT6plex)"	"1"	"2"	"P01835"	"Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"P01836; P01835"	"Ig kappa chain C region, A allele OS=Rattus norvegicus OX=10116 PE=1 SV=1; Ig kappa chain C region, B allele OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"665.68378"	"1995.03678"	"1995.03564"	"0.57"	"0.00038"	"10/128"	"10"	"128"	"1706740.97943115"	"HCD"	"MS2"	"8.983761"	"48.0"	"100.000"	"78.8010"	"27033"	"27033"	"27015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.5"	""	"42.0"	""	"47.2"	""	"105.6"	""	"118.6"	"109.7"	""	"1213"	"36"	"37.000"	"30.000"	"0.0152697105668575"	"16"	"0"	"2.518E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IHEGCEEPATHNALAK"	"[R].IHEGcEEPATHnALAk.[I]"	"C5(Methylthio); N12(Deamidated); K16(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"2"	"2"	"0.7778"	"0.0000"	"1"	"1"	"1"	"998.47522"	"1995.94316"	"1995.94656"	"-1.70"	"-0.00170"	"4/142"	"4"	"142"	"112917.967407227"	"HCD"	"MS2"	"36.17551"	"6.8"	"100.000"	"99.5814"	"35394"	"35394"	"35367"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.6"	""	"6.9"	""	"11.7"	""	"8.7"	""	"5.3"	"25.1"	""	"624"	"9"	"34.000"	"27.000"	"3.55757933719085"	"15"	"0.003529"	"0.03929"	"0.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QNQEYQQLMDIK"	"[R].qNQEYQQLMDIk.[S]"	"N-Term(TMT6plex); K12(TMT6plex)"	"1"	"1"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"Q63279"	"Keratin, type I cytoskeletal 19 OS=Rattus norvegicus OX=10116 GN=Krt19 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"666.02393"	"1996.05722"	"1996.05738"	"-0.08"	"-0.00005"	"11/122"	"11"	"122"	"457584.498779297"	"HCD"	"MS2"	"68.27708"	"10.0"	"100.000"	"100.3480"	"35734"	"35734"	"35707"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"9.7"	""	"11.9"	""	"16.1"	""	"19.1"	"21.6"	""	"1242"	"10"	"37.000"	"30.000"	"5.67664322953025"	"14"	"0.001103"	"0.008927"	"0.252"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FAIQDISVEETSAK"	"[R].fAIQDISVEETSAk.[E]"	"N-Term(TMT6plex); K14(TMT6plex)"	"2"	"2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1;Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9Z1P2; Q9QXQ0"	"Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1; Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"666.03839"	"1996.10062"	"1996.10029"	"0.16"	"0.00011"	"12/138"	"12"	"138"	"655126.35559082"	"HCD"	"MS2"	"0"	"21.3"	"100.000"	"109.3027"	"39251"	"39251"	"39243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.6"	""	"24.6"	""	"25.8"	""	"39.1"	""	"47.2"	"49.6"	""	"1181"	"25"	"37.000"	"30.000"	"0.182481945289928"	"15"	"0"	"7.313E-05"	"0.682"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].qEPGENSEILPSLk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.4444"	"0.0000"	"1"	"1"	"1"	"1000.05798"	"1999.10869"	"1999.11119"	"-1.25"	"-0.00125"	"5/150"	"5"	"150"	"89924.548828125"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"96.4886"	"34143"	"34143"	"34121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.4"	""	"8.4"	""	"4.6"	""	"11.5"	""	"12.2"	"8.2"	""	"1000"	"9"	"36.000"	"30.000"	"5.68813642911715"	"18"	"0.003001"	"0.03238"	"0.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].qEPGENSEILPSLk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.7955"	"0.0000"	"1"	"1"	"1"	"667.04138"	"1999.10959"	"1999.11119"	"-0.80"	"-0.00053"	"14/150"	"14"	"150"	"1170755.24084473"	"HCD"	"MS2"	"16.61528"	"29.6"	"100.000"	"96.4080"	"34111"	"34111"	"34098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.0"	""	"39.8"	""	"37.6"	""	"50.7"	"1.2"	"58.4"	"43.9"	""	"1004"	"44"	"37.000"	"30.000"	"0.00209268430502108"	"24"	"0"	"1.769E-07"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].qEPGENSEILPSLk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"2"	"2"	"0.8750"	"0.0000"	"1"	"1"	"1"	"1000.05878"	"1999.11028"	"1999.11119"	"-0.46"	"-0.00046"	"5/150"	"5"	"150"	"96090.012512207"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"96.5508"	"34200"	"34200"	"34175"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.4"	""	"7.7"	""	"3.3"	""	"6.3"	""	"8.1"	"11.1"	""	"1016"	"8"	"37.000"	"30.000"	"8.08842033341995"	"14"	"0.00394"	"0.04299"	"0.109"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].qEPGENSEILPSLk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"667.04163"	"1999.11032"	"1999.11119"	"-0.43"	"-0.00029"	"13/150"	"13"	"150"	"1216339.0300293"	"HCD"	"MS2"	"3.692152"	"35.1"	"100.000"	"96.7499"	"34280"	"34280"	"34263"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.3"	""	"42.6"	""	"41.7"	""	"57.5"	""	"71.7"	"62.7"	""	"1016"	"38"	"37.000"	"30.000"	"0.00831502792885327"	"18"	"0"	"3.871E-06"	"0.944"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].qEPGENSEILPSLk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"667.04205"	"1999.11161"	"1999.11119"	"0.21"	"0.00014"	"14/150"	"14"	"150"	"1007201.22137451"	"HCD"	"MS2"	"8.751935"	"27.1"	"100.000"	"96.4680"	"34166"	"34166"	"34155"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.0"	""	"39.9"	""	"33.4"	""	"48.9"	""	"46.6"	"48.5"	""	"1003"	"39"	"37.000"	"30.000"	"0.00644571259961724"	"24"	"0"	"1.745E-06"	"1.016"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPGENSEILPSLK"	"[K].qEPGENSEILPSLk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"P23764"	"Glutathione peroxidase 3 OS=Rattus norvegicus OX=10116 GN=Gpx3 PE=2 SV=2"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"667.04205"	"1999.11161"	"1999.11119"	"0.21"	"0.00014"	"13/150"	"13"	"150"	"1458285.23364258"	"HCD"	"MS2"	"2.670125"	"40.9"	"100.000"	"96.6826"	"34221"	"34221"	"34207"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.5"	""	"53.1"	""	"49.4"	""	"68.3"	""	"76.4"	"74.8"	""	"1003"	"35"	"37.000"	"30.000"	"0.0160794406623949"	"18"	"0"	"2.059E-06"	"1.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEEHLAVK"	"[K].sLTNDWEEHLAVk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9615"	"0.0000"	"1"	"1"	"1"	"667.36517"	"2000.08097"	"2000.08531"	"-2.17"	"-0.00145"	"11/128"	"11"	"128"	"363395.309265137"	"HCD"	"MS2"	"19.06811"	"18.5"	"100.000"	"98.5849"	"35021"	"35021"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"31.5"	""	"28.5"	""	"25.0"	""	"30.2"	""	"30.4"	"30.7"	""	"1110"	"26"	"37.000"	"30.000"	"0.125398685247264"	"15"	"0"	"3.146E-05"	"0.757"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLTNDWEEHLAVK"	"[K].sLTNDWEEHLAVk.[H]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"667.36780"	"2000.08884"	"2000.08531"	"1.76"	"0.00118"	"13/128"	"13"	"128"	"323974.199401855"	"HCD"	"MS2"	"27.5442"	"17.5"	"100.000"	"98.5913"	"34994"	"34994"	"34970"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.7"	""	"18.4"	""	"29.0"	""	"28.7"	""	"28.6"	"33.2"	""	"1136"	"30"	"37.000"	"30.000"	"0.0514456117310178"	"15"	"0"	"1.82E-05"	"0.806"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVDEFSGAEHIDQLR"	"[K].gTVDEFSGAEHIDQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.33069"	"2002.97751"	"2003.00315"	"-12.80"	"-0.00855"	"18/146"	"18"	"146"	"1016559.87438965"	"HCD"	"MS2"	"42.0145"	"31.7"	"100.000"	"80.0663"	"27549"	"27549"	"27524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.1"	""	"36.6"	""	"35.1"	""	"53.5"	""	"62.8"	"77.0"	""	"798"	"30"	"36.000"	"29.000"	"0.0381920434446643"	"14"	"0"	"4.039E-06"	"0.941"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVDEFSGAEHIDQLR"	"[K].gTVDEFSGAEHIDQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.33075"	"2002.97770"	"2003.00315"	"-12.71"	"-0.00848"	"18/146"	"18"	"146"	"821246.623168945"	"HCD"	"MS2"	"30.07102"	"30.8"	"100.000"	"79.9425"	"27471"	"27471"	"27446"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"41.8"	""	"37.4"	""	"32.7"	""	"51.3"	""	"60.1"	"71.7"	""	"798"	"21"	"36.000"	"29.000"	"0.316936965654988"	"14"	"0"	"0.0003666"	"0.538"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTVDEFSGAEHIDQLR"	"[K].gTVDEFSGAEHIDQLR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"Q99MA2"	"Xaa-Pro aminopeptidase 2 OS=Rattus norvegicus OX=10116 GN=Xpnpep2 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"668.33838"	"2003.00058"	"2003.00315"	"-1.28"	"-0.00086"	"9/146"	"9"	"146"	"1220076.75164795"	"HCD"	"MS2"	"36.17808"	"38.0"	"100.000"	"80.0483"	"27514"	"27514"	"27493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.6"	""	"41.4"	""	"41.7"	""	"77.1"	"0.9"	"76.3"	"79.2"	""	"942"	"60"	"36.000"	"29.000"	"4.90931509244246E-05"	"22"	"0"	"2.355E-08"	"1.4"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNNHYAMEDVATR"	"[K].lIQNNHYAMEDVATR.[R]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"668.67712"	"2004.01682"	"2004.01702"	"-0.10"	"-0.00007"	"16/144"	"16"	"144"	"2452922.13012695"	"HCD"	"MS2"	"12.16291"	"49.6"	"100.000"	"65.5163"	"21620"	"21620"	"21599"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.8"	""	"62.2"	""	"70.6"	""	"69.3"	"1.8"	"90.3"	"97.6"	""	"1081"	"40"	"37.000"	"30.000"	"0.0051975143646637"	"15"	"0"	"9.392E-06"	"0.865"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTVPGLEDLPQHGLPR"	"[K].mTVPGLEDLPQHGLPR.[L]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9848"	"0.0000"	"1"	"1"	"1"	"669.02893"	"2005.07224"	"2005.07381"	"-0.78"	"-0.00052"	"11/142"	"11"	"142"	"1386978.22644043"	"HCD"	"MS2"	"17.67602"	"23.1"	"100.000"	"92.7845"	"32683"	"32683"	"32663"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"34.9"	""	"32.3"	""	"44.3"	""	"40.1"	"40.7"	""	"1315"	"66"	"38.000"	"31.000"	"1.64776683386861E-05"	"17"	"0"	"6.992E-08"	"1.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTVPGLEDLPQHGLPR"	"[K].mTVPGLEDLPQHGLPR.[L]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.02930"	"2005.07334"	"2005.07381"	"-0.24"	"-0.00016"	"19/142"	"19"	"142"	"1216977.78839111"	"HCD"	"MS2"	"1.262773"	"18.9"	"100.000"	"93.0970"	"32804"	"32804"	"32784"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"19.5"	""	"29.3"	""	"34.4"	""	"38.0"	"33.3"	""	"1313"	"46"	"38.000"	"31.000"	"0.00166431194592188"	"15"	"0"	"2.838E-07"	"1.178"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTVPGLEDLPQHGLPR"	"[K].mTVPGLEDLPQHGLPR.[L]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.9423"	"0.0000"	"1"	"1"	"1"	"669.02960"	"2005.07425"	"2005.07381"	"0.22"	"0.00015"	"12/142"	"12"	"142"	"1129096.03381348"	"HCD"	"MS2"	"3.778404"	"20.3"	"100.000"	"92.8341"	"32662"	"32662"	"32637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"23.5"	""	"29.0"	""	"31.8"	""	"38.2"	"40.5"	""	"1310"	"52"	"38.000"	"31.000"	"0.000415184660873288"	"19"	"0"	"6.329E-06"	"0.9"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MTVPGLEDLPQHGLPR"	"[K].mTVPGLEDLPQHGLPR.[L]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.02966"	"2005.07444"	"2005.07381"	"0.31"	"0.00021"	"12/142"	"12"	"142"	"1467841.03955078"	"HCD"	"MS2"	"14.19502"	"23.1"	"100.000"	"93.1468"	"32788"	"32788"	"32769"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.7"	""	"31.5"	""	"30.2"	""	"44.1"	""	"38.0"	"44.3"	""	"1311"	"76"	"38.000"	"31.000"	"1.72811522340853E-06"	"17"	"0"	"2.941E-08"	"1.38"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.99420"	"2007.96805"	"2007.97218"	"-2.06"	"-0.00138"	"10/154"	"10"	"154"	"204515.81439209"	"HCD"	"MS2"	"4.992551"	"10.0"	"100.000"	"82.1346"	"28360"	"28360"	"28336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.7"	""	"11.4"	""	"12.1"	""	"20.5"	""	"16.8"	"22.2"	""	"845"	"31"	"36.000"	"29.000"	"0.0345801372986948"	"15"	"0"	"0.0002022"	"0.591"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.5000"	"0.0000"	"1"	"1"	"1"	"1004.48883"	"2007.97038"	"2007.97218"	"-0.90"	"-0.00090"	"5/154"	"5"	"154"	"60422.7087402344"	"HCD"	"MS2"	"0"	"2.7"	"100.000"	"81.5856"	"28137"	"28137"	"28120"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.6"	""	"1.8"	""	"7.0"	""	"3.9"	""	"4.3"	"2.9"	""	"856"	"4"	"36.000"	"29.000"	"16.27210616252"	"15"	"0.004634"	"0.05443"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"0.8667"	"0.0000"	"1"	"1"	"1"	"1004.48944"	"2007.97161"	"2007.97218"	"-0.29"	"-0.00029"	"4/154"	"4"	"154"	"61247.9057006836"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"81.6659"	"28198"	"28198"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.2"	""	"5.3"	""	"4.6"	""	"2.1"	""	"6.6"	"5.4"	""	"858"	"15"	"36.000"	"29.000"	"1.3075469505504"	"15"	"0.001488"	"0.01265"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.9130"	"0.0000"	"1"	"1"	"1"	"669.99542"	"2007.97171"	"2007.97218"	"-0.23"	"-0.00016"	"11/154"	"11"	"154"	"239101.54486084"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"81.5325"	"28116"	"28116"	"28096"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.8"	""	"9.0"	""	"14.0"	""	"15.0"	""	"15.1"	"13.3"	""	"858"	"46"	"36.000"	"29.000"	"0.00118975432489564"	"19"	"0"	"7.515E-06"	"0.885"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.48956"	"2007.97185"	"2007.97218"	"-0.17"	"-0.00017"	"5/154"	"5"	"154"	"86519.1660766602"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"81.9133"	"28270"	"28270"	"28247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.0"	""	"7.8"	""	"8.2"	""	"6.1"	""	"11.0"	"6.3"	""	"873"	"14"	"36.000"	"29.000"	"1.67103000457793"	"13"	"0.001348"	"0.01146"	"0.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.99554"	"2007.97208"	"2007.97218"	"-0.05"	"-0.00003"	"12/154"	"12"	"154"	"553609.141662598"	"HCD"	"MS2"	"4.954203"	"10.1"	"100.000"	"81.9844"	"28327"	"28327"	"28307"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"13.9"	""	"17.1"	""	"16.5"	""	"20.3"	"14.8"	""	"879"	"51"	"36.000"	"29.000"	"0.000381908108671329"	"16"	"0"	"3.961E-06"	"0.942"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"669.99567"	"2007.97245"	"2007.97218"	"0.13"	"0.00009"	"12/154"	"12"	"154"	"288308.722290039"	"HCD"	"MS2"	"12.00853"	"8.2"	"100.000"	"81.6567"	"28194"	"28194"	"28168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.1"	""	"9.0"	"1.7"	"15.1"	""	"14.2"	""	"13.4"	"11.0"	""	"881"	"34"	"36.000"	"29.000"	"0.0162909313193207"	"15"	"0"	"6.231E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"3"	"3"	"0.9487"	"0.0000"	"1"	"1"	"1"	"669.99567"	"2007.97245"	"2007.97218"	"0.13"	"0.00009"	"15/154"	"15"	"154"	"589072.911682129"	"HCD"	"MS2"	"1.582497"	"11.7"	"100.000"	"81.8324"	"28237"	"28237"	"28215"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.9"	""	"15.5"	""	"18.6"	""	"21.0"	""	"17.8"	"17.6"	""	"881"	"39"	"36.000"	"29.000"	"0.00496530479445313"	"17"	"0"	"2.153E-06"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQYDNDVTVWSPQGR"	"[R].nQYDNDVTVWSPQGR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"P18420"	"Proteasome subunit alpha type-1 OS=Rattus norvegicus OX=10116 GN=Psma1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1004.49023"	"2007.97319"	"2007.97218"	"0.50"	"0.00050"	"5/154"	"5"	"154"	"95131.5827026367"	"HCD"	"MS2"	"0"	"4.8"	"100.000"	"82.0259"	"28344"	"28344"	"28318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.4"	""	"7.7"	""	"8.0"	""	"7.1"	""	"6.4"	"5.7"	""	"888"	"10"	"36.000"	"29.000"	"4.69226974090864"	"13"	"0.001596"	"0.01303"	"0.218"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IAEGFSDAALIMVDNAK"	"[R].iAEGFSDAALImVDnAK.[F]"	"N-Term(TMT6plex); M12(Oxidation); N15(Deamidated)"	"1"	"1"	"Q5FVL2"	"ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1"	"Q5FVL2"	"ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"671.01013"	"2011.01584"	"2011.02552"	"-4.81"	"-0.00323"	"3/154"	"3"	"154"	"236584.563476563"	"HCD"	"MS2"	"0"	"5.2"	"100.000"	"107.1719"	"38439"	"38439"	"38428"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.8"	""	"5.4"	""	"7.9"	""	"5.8"	""	"12.7"	"11.0"	""	"1118"	"4"	"37.000"	"30.000"	"23.0362513175407"	"13"	"0.004819"	"0.05806"	"0.081"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEGVFETEAPGGYK"	"[K].vAEGVFETEAPGGYk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"1006.53973"	"2012.07219"	"2012.07408"	"-0.94"	"-0.00094"	"5/124"	"5"	"124"	"86969.6249389648"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"99.2503"	"35289"	"35289"	"35266"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"7.9"	""	"10.8"	""	"8.2"	""	"8.7"	"10.4"	""	"1265"	"16"	"38.000"	"31.000"	"1.46575211610506"	"17"	"0.001316"	"0.01032"	"0.239"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEGVFETEAPGGYK"	"[K].vAEGVFETEAPGGYk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"671.36273"	"2012.07364"	"2012.07408"	"-0.22"	"-0.00015"	"17/124"	"17"	"124"	"1441169.1852417"	"HCD"	"MS2"	"31.02988"	"44.2"	"100.000"	"99.2065"	"35271"	"35271"	"35255"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"51.8"	""	"45.3"	""	"72.7"	""	"68.8"	"0.0"	"93.2"	"87.8"	""	"1279"	"35"	"38.000"	"31.000"	"0.0197624392909244"	"16"	"0"	"3.016E-06"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEGVFETEAPGGYK"	"[K].vAEGVFETEAPGGYk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"671.36273"	"2012.07364"	"2012.07408"	"-0.22"	"-0.00015"	"16/124"	"16"	"124"	"1563245.72296143"	"HCD"	"MS2"	"23.79431"	"48.2"	"100.000"	"99.1340"	"35212"	"35212"	"35199"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.5"	""	"63.1"	""	"60.9"	""	"75.1"	"1.3"	"88.5"	"99.0"	""	"1279"	"36"	"38.000"	"31.000"	"0.0153052542622124"	"16"	"0"	"7.854E-07"	"1.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAEGVFETEAPGGYK"	"[K].vAEGVFETEAPGGYk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"Q5I0D1"	"Glyoxalase domain-containing protein 4 OS=Rattus norvegicus OX=10116 GN=Glod4 PE=1 SV=1"	"0"	"2"	"2"	"0.4737"	"0.0000"	"1"	"1"	"1"	"1006.54144"	"2012.07561"	"2012.07408"	"0.76"	"0.00077"	"6/124"	"6"	"124"	"84808.7217407227"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"99.1961"	"35238"	"35238"	"35210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.3"	""	"6.4"	""	"7.5"	""	"8.0"	""	"12.5"	"8.6"	""	"1274"	"19"	"38.000"	"31.000"	"0.738141175870815"	"24"	"0.0001686"	"0.001248"	"0.428"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8868"	"0.0000"	"1"	"1"	"1"	"671.37451"	"2012.10898"	"2012.11264"	"-1.82"	"-0.00122"	"13/152"	"13"	"152"	"760788.620910645"	"HCD"	"MS2"	"9.695469"	"19.4"	"100.000"	"76.3229"	"26004"	"26004"	"25984"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.7"	""	"21.4"	""	"23.1"	""	"36.7"	""	"32.1"	"37.9"	""	"1140"	"53"	"37.000"	"30.000"	"0.000297080985329896"	"22"	"0"	"3.961E-07"	"1.148"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.9535"	"0.0000"	"1"	"1"	"1"	"503.78299"	"2012.11013"	"2012.11264"	"-1.25"	"-0.00063"	"15/152"	"15"	"152"	"5200554.5255127"	"HCD"	"MS2"	"0"	"35.5"	"100.000"	"76.8897"	"26266"	"26266"	"26250"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.3"	""	"33.3"	""	"42.6"	""	"70.4"	""	"66.8"	"72.4"	""	"1145"	"43"	"37.000"	"30.000"	"0.00284299104030317"	"18"	"0"	"5.543E-07"	"1.118"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"503.78305"	"2012.11037"	"2012.11264"	"-1.13"	"-0.00057"	"11/152"	"11"	"152"	"1303894.76947021"	"HCD"	"MS2"	"18.83625"	"17.2"	"100.000"	"76.2588"	"26010"	"26010"	"25989"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.2"	""	"18.3"	""	"23.1"	""	"30.5"	""	"33.7"	"37.0"	""	"1135"	"34"	"37.000"	"30.000"	"0.023931276569572"	"17"	"0"	"3.477E-05"	"0.748"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.9286"	"0.0000"	"1"	"1"	"1"	"503.78333"	"2012.11147"	"2012.11264"	"-0.58"	"-0.00029"	"15/152"	"15"	"152"	"7003184.64569092"	"HCD"	"MS2"	"0"	"42.6"	"100.000"	"76.7258"	"26169"	"26169"	"26152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"66.1"	""	"39.0"	""	"49.9"	""	"79.0"	"0.1"	"90.3"	"80.0"	""	"1129"	"42"	"37.000"	"30.000"	"0.00380771071635477"	"18"	"0"	"5.371E-07"	"1.121"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.8222"	"0.0000"	"1"	"1"	"1"	"503.78345"	"2012.11196"	"2012.11264"	"-0.34"	"-0.00017"	"14/152"	"14"	"152"	"1089900.88208008"	"HCD"	"MS2"	"34.72218"	"15.2"	"100.000"	"76.1149"	"25920"	"25920"	"25893"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.5"	""	"18.3"	""	"18.1"	""	"27.6"	""	"28.8"	"31.8"	""	"1133"	"45"	"37.000"	"30.000"	"0.00182894191995021"	"23"	"0"	"4.598E-06"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9107"	"0.0000"	"1"	"1"	"1"	"671.37561"	"2012.11228"	"2012.11264"	"-0.18"	"-0.00012"	"16/152"	"16"	"152"	"1396088.64233398"	"HCD"	"MS2"	"2.162"	"26.2"	"100.000"	"76.6761"	"26179"	"26179"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.8"	""	"32.6"	""	"30.3"	""	"40.5"	""	"48.5"	"49.0"	""	"1140"	"56"	"37.000"	"30.000"	"0.000146512559617825"	"21"	"0"	"4.775E-08"	"1.337"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.9375"	"0.0000"	"1"	"1"	"1"	"503.78357"	"2012.11245"	"2012.11264"	"-0.10"	"-0.00005"	"18/152"	"18"	"152"	"11089808.6791992"	"HCD"	"MS2"	"0.5271268"	"60.8"	"100.000"	"76.4288"	"26048"	"26048"	"26032"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"84.0"	""	"65.1"	""	"72.7"	""	"112.2"	"0.2"	"116.6"	"126.4"	""	"1134"	"48"	"37.000"	"30.000"	"0.000830965625822001"	"19"	"0"	"1.068E-07"	"1.265"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.8913"	"0.0000"	"1"	"1"	"1"	"503.78360"	"2012.11257"	"2012.11264"	"-0.03"	"-0.00002"	"15/152"	"15"	"152"	"1334085.48522949"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"77.0075"	"26281"	"26281"	"26268"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"18.0"	""	"19.8"	""	"31.0"	""	"30.6"	"29.7"	""	"1134"	"46"	"37.000"	"30.000"	"0.00147768906284937"	"20"	"0"	"8.873E-07"	"1.076"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"4"	"4"	"0.9545"	"0.0000"	"1"	"1"	"1"	"503.78363"	"2012.11269"	"2012.11264"	"0.03"	"0.00001"	"16/152"	"16"	"152"	"11411066.6867676"	"HCD"	"MS2"	"0.1542932"	"61.6"	"89.161"	"76.5770"	"26139"	"26139"	"26121"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"101.2"	""	"73.4"	""	"75.6"	""	"110.8"	"0.1"	"116.3"	"106.2"	""	"1117"	"44"	"37.000"	"30.000"	"0.0023121881838682"	"17"	"0"	"7.354E-07"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"671.37579"	"2012.11283"	"2012.11264"	"0.09"	"0.00006"	"12/152"	"12"	"152"	"320266.399047852"	"HCD"	"MS2"	"38.74467"	"14.2"	"100.000"	"76.9021"	"26240"	"26240"	"26228"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.4"	""	"18.7"	""	"21.1"	""	"23.0"	""	"28.2"	"24.7"	""	"1121"	"31"	"37.000"	"30.000"	"0.0416462226791101"	"21"	"0"	"8.045E-05"	"0.673"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"671.37579"	"2012.11283"	"2012.11264"	"0.09"	"0.00006"	"14/152"	"14"	"152"	"573341.680603027"	"HCD"	"MS2"	"15.64187"	"16.8"	"100.000"	"76.3928"	"26064"	"26064"	"26042"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.3"	""	"24.0"	"2.0"	"20.7"	""	"28.1"	""	"27.7"	"31.9"	""	"1121"	"33"	"37.000"	"30.000"	"0.031015273621542"	"18"	"0"	"4.582E-06"	"0.929"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHPIVETLR"	"[K].hLEINPDHPIVETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"P34058"	"Heat shock protein HSP 90-beta OS=Rattus norvegicus OX=10116 GN=Hsp90ab1 PE=1 SV=4"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"671.37592"	"2012.11319"	"2012.11264"	"0.28"	"0.00018"	"16/152"	"16"	"152"	"1183886.49719238"	"HCD"	"MS2"	"3.231731"	"21.9"	"100.000"	"76.6085"	"26121"	"26121"	"26104"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"27.3"	""	"30.2"	""	"39.8"	""	"37.9"	"36.6"	""	"1123"	"45"	"37.000"	"30.000"	"0.00169570289100573"	"20"	"0"	"9.143E-08"	"1.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.78198"	"2016.10610"	"2016.10755"	"-0.72"	"-0.00036"	"15/152"	"15"	"152"	"1695567.82653809"	"HCD"	"MS2"	"22.00878"	"18.1"	"100.000"	"88.7370"	"31012"	"31012"	"30994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"22.0"	""	"19.4"	""	"27.4"	"0.4"	"31.8"	"45.5"	""	"1244"	"50"	"37.000"	"30.000"	"0.000658855817060273"	"16"	"0"	"4.757E-07"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"0.9808"	"0.0000"	"1"	"1"	"1"	"504.78201"	"2016.10622"	"2016.10755"	"-0.66"	"-0.00033"	"15/152"	"15"	"152"	"853617.892578125"	"HCD"	"MS2"	"8.000637"	"9.8"	"100.000"	"89.1535"	"31220"	"31220"	"31201"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.7"	""	"13.0"	""	"10.1"	""	"15.9"	"1.1"	"16.9"	"20.7"	""	"1245"	"52"	"37.000"	"30.000"	"0.000393676377481697"	"17"	"0"	"5.605E-07"	"1.117"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"504.78210"	"2016.10659"	"2016.10755"	"-0.48"	"-0.00024"	"15/152"	"15"	"152"	"1329774.28674316"	"HCD"	"MS2"	"43.14868"	"20.7"	"100.000"	"88.5396"	"30972"	"30972"	"30949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.7"	""	"22.1"	""	"27.7"	""	"28.7"	"0.5"	"33.4"	"55.2"	""	"1241"	"32"	"37.000"	"30.000"	"0.0392411553778945"	"14"	"0"	"1.565E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"0.9123"	"0.0000"	"1"	"1"	"1"	"504.78220"	"2016.10695"	"2016.10755"	"-0.30"	"-0.00015"	"15/152"	"15"	"152"	"2413858.71282959"	"HCD"	"MS2"	"4.042033"	"18.1"	"100.000"	"89.0346"	"31133"	"31133"	"31119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"19.2"	""	"25.5"	""	"31.9"	""	"35.8"	"35.4"	""	"1250"	"57"	"37.000"	"30.000"	"0.00011936582866039"	"21"	"0"	"4.238E-06"	"0.936"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.8971"	"0.0000"	"1"	"1"	"1"	"672.70721"	"2016.10709"	"2016.10755"	"-0.23"	"-0.00015"	"14/152"	"14"	"152"	"313377.653564453"	"HCD"	"MS2"	"16.18275"	"9.7"	"100.000"	"88.9491"	"31099"	"31099"	"31073"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"11.6"	""	"18.5"	""	"14.8"	""	"19.1"	"15.2"	""	"1258"	"68"	"37.000"	"30.000"	"9.67499268750611E-06"	"24"	"0"	"1.349E-06"	"1.039"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"0.9423"	"0.0000"	"1"	"1"	"1"	"504.78226"	"2016.10720"	"2016.10755"	"-0.18"	"-0.00009"	"15/152"	"15"	"152"	"2235649.08740234"	"HCD"	"MS2"	"6.466012"	"18.5"	"100.000"	"88.8653"	"31104"	"31104"	"31084"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.5"	""	"24.4"	""	"24.3"	""	"28.3"	""	"34.2"	"39.7"	""	"1258"	"52"	"37.000"	"30.000"	"0.000416534180828409"	"18"	"0"	"2.688E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HLEINPDHSIIETLR"	"[K].hLEINPDHSIIETLR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"4"	"4"	"0.9365"	"0.0000"	"1"	"1"	"1"	"504.78229"	"2016.10732"	"2016.10755"	"-0.12"	"-0.00006"	"14/152"	"14"	"152"	"727477.727905273"	"HCD"	"MS2"	"9.439194"	"9.4"	"100.000"	"89.3647"	"31265"	"31265"	"31251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.7"	""	"11.3"	""	"13.9"	""	"16.6"	""	"15.3"	"20.0"	""	"1259"	"63"	"37.000"	"31.000"	"3.09026508038064E-05"	"21"	"0"	"6.306E-07"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHNGIVYTPk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.7857"	"0.0000"	"1"	"1"	"1"	"504.78391"	"2016.11379"	"2016.11661"	"-1.40"	"-0.00071"	"5/138"	"5"	"138"	"1260446.7109375"	"HCD"	"MS2"	"13.48213"	"25.9"	"100.000"	"72.5563"	"24474"	"24474"	"24448"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"49.8"	""	"41.3"	""	"30.2"	""	"31.7"	"0.2"	"44.4"	"47.6"	""	"1226"	"14"	"37.000"	"30.000"	"2.57312257186488"	"16"	"9.9E-05"	"0.0006068"	"0.493"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHNGIVYTPk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"504.78400"	"2016.11416"	"2016.11661"	"-1.22"	"-0.00061"	"5/138"	"5"	"138"	"1041588.77423096"	"HCD"	"MS2"	"19.07816"	"20.9"	"100.000"	"72.7767"	"24593"	"24593"	"24568"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.8"	""	"38.9"	""	"23.0"	""	"29.6"	""	"35.5"	"32.9"	""	"1221"	"12"	"37.000"	"30.000"	"3.55374014449117"	"15"	"0.0001991"	"0.003102"	"0.347"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHNGIVYTPk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.70984"	"2016.11496"	"2016.11661"	"-0.82"	"-0.00055"	"15/138"	"15"	"138"	"2175408.68457031"	"HCD"	"MS2"	"0.9136836"	"55.9"	"100.000"	"72.6508"	"24512"	"24512"	"24493"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"103.1"	""	"99.5"	""	"69.0"	""	"88.3"	""	"85.2"	"85.9"	""	"1220"	"27"	"37.000"	"30.000"	"0.130415687459636"	"14"	"0"	"2.833E-05"	"0.766"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHNGIVYTPk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.71014"	"2016.11588"	"2016.11661"	"-0.36"	"-0.00024"	"15/138"	"15"	"138"	"2173015.5112915"	"HCD"	"MS2"	"9.858776"	"58.5"	"100.000"	"72.3498"	"24390"	"24390"	"24368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"106.7"	""	"105.2"	""	"76.0"	""	"87.9"	"0.8"	"85.5"	"90.5"	""	"1198"	"29"	"37.000"	"30.000"	"0.071684757825304"	"14"	"0"	"2.795E-06"	"0.973"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHNGIVYTPk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"672.71027"	"2016.11625"	"2016.11661"	"-0.18"	"-0.00012"	"7/138"	"7"	"138"	"2325697.09899902"	"HCD"	"MS2"	"6.634723"	"62.5"	"100.000"	"72.5414"	"24497"	"24497"	"24478"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.8"	""	"100.4"	""	"72.0"	""	"92.8"	""	"104.0"	"101.5"	""	"1205"	"22"	"37.000"	"30.000"	"0.391703138431712"	"14"	"0"	"7.435E-05"	"0.68"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHNGIVYTPk.[Q]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"672.71057"	"2016.11716"	"2016.11661"	"0.27"	"0.00018"	"11/138"	"11"	"138"	"2150639.33361816"	"HCD"	"MS2"	"7.407596"	"55.3"	"100.000"	"72.8438"	"24620"	"24620"	"24600"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"99.4"	""	"109.0"	""	"69.0"	""	"79.4"	"1.3"	"91.0"	"73.0"	""	"1194"	"39"	"37.000"	"30.000"	"0.00690199008588683"	"16"	"0"	"5.352E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99530"	"2016.98332"	"2016.98578"	"-1.22"	"-0.00123"	"6/194"	"6"	"194"	"124523.020996094"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"79.5713"	"27320"	"27320"	"27291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"9.1"	""	"11.4"	""	"5.1"	""	"9.0"	"10.2"	""	"877"	"9"	"36.000"	"29.000"	"5.70124359967598"	"13"	"0.001615"	"0.01409"	"0.211"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99652"	"2016.98577"	"2016.98578"	"-0.01"	"-0.00001"	"10/194"	"10"	"194"	"118099.206787109"	"HCD"	"MS2"	"0"	"4.9"	"100.000"	"79.7253"	"27410"	"27410"	"27382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.3"	""	"2.7"	""	"8.3"	""	"5.9"	""	"10.5"	"6.5"	""	"885"	"16"	"36.000"	"29.000"	"1.01137747049363"	"14"	"0.0001991"	"0.002122"	"0.381"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99664"	"2016.98601"	"2016.98578"	"0.11"	"0.00011"	"4/194"	"4"	"194"	"85110.7490844727"	"HCD"	"MS2"	"100"	"4.3"	"100.000"	"79.3795"	"27269"	"27269"	"27244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"7.9"	""	"3.6"	""	"4.2"	""	"5.7"	"8.1"	""	"892"	"2"	"36.000"	"29.000"	"25.1961890766287"	"13"	"0.0007633"	"0.007257"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1008.99713"	"2016.98699"	"2016.98578"	"0.60"	"0.00060"	"3/194"	"3"	"194"	"96993.3734130859"	"HCD"	"MS2"	"0"	"3.7"	"100.000"	"79.2368"	"27184"	"27184"	"27160"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.6"	""	"3.9"	""	"3.4"	""	"4.8"	""	"7.2"	"6.5"	""	"898"	"9"	"36.000"	"29.000"	"5.47326329917265"	"13"	"0.001872"	"0.01556"	"0.202"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.00055"	"2016.98709"	"2016.98578"	"0.65"	"0.00044"	"17/194"	"17"	"194"	"1072238.82873535"	"HCD"	"MS2"	"33.48182"	"25.9"	"100.000"	"79.6292"	"27343"	"27343"	"27323"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"50.2"	""	"46.7"	""	"36.0"	""	"33.4"	"1.1"	"36.9"	"39.7"	""	"898"	"35"	"36.000"	"29.000"	"0.0157125379995732"	"15"	"0"	"5.943E-06"	"0.906"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELMLGGTDSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.00079"	"2016.98783"	"2016.98578"	"1.01"	"0.00068"	"18/194"	"18"	"194"	"1101905.34533691"	"HCD"	"MS2"	"35.58638"	"26.5"	"100.000"	"79.7508"	"27420"	"27420"	"27398"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.4"	""	"44.2"	""	"32.2"	""	"36.2"	"1.2"	"39.4"	"47.2"	""	"896"	"31"	"36.000"	"29.000"	"0.0350976479959263"	"14"	"0"	"1.227E-05"	"0.841"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.02948"	"2017.09609"	"2017.10063"	"-2.25"	"-0.00113"	"9/138"	"9"	"138"	"975820.218566895"	"HCD"	"MS2"	"19.94186"	"18.1"	"100.000"	"79.0916"	"27125"	"27125"	"27099"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.0"	""	"28.9"	""	"28.0"	""	"31.6"	""	"27.7"	"21.7"	""	"1288"	"19"	"38.000"	"31.000"	"0.792293088403173"	"14"	"0"	"0.000294"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"505.03027"	"2017.09926"	"2017.10063"	"-0.68"	"-0.00034"	"13/138"	"13"	"138"	"711000.883239746"	"HCD"	"MS2"	"55.74953"	"16.2"	"100.000"	"79.6447"	"27377"	"27377"	"27350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"23.9"	""	"21.8"	""	"21.3"	""	"32.0"	"29.4"	""	"1303"	"17"	"38.000"	"31.000"	"1.35180615662187"	"14"	"0.0001991"	"0.004434"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.8571"	"0.0000"	"1"	"1"	"1"	"505.03043"	"2017.09987"	"2017.10063"	"-0.37"	"-0.00019"	"10/138"	"10"	"138"	"868724.313964844"	"HCD"	"MS2"	"33.56714"	"16.2"	"100.000"	"78.1650"	"26774"	"26774"	"26751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.7"	""	"25.5"	""	"20.6"	""	"26.6"	""	"30.2"	"25.4"	""	"1294"	"14"	"38.000"	"31.000"	"2.5113328679595"	"16"	"0.0001686"	"0.001879"	"0.392"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9714"	"0.0000"	"1"	"1"	"1"	"673.03821"	"2017.10007"	"2017.10063"	"-0.28"	"-0.00019"	"14/138"	"14"	"138"	"4067009.40447998"	"HCD"	"MS2"	"13.67555"	"85.1"	"100.000"	"79.1470"	"27147"	"27147"	"27128"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"182.1"	""	"160.6"	""	"102.6"	""	"117.8"	"2.4"	"126.1"	"111.0"	""	"1299"	"35"	"38.000"	"31.000"	"0.0185600505792203"	"16"	"0"	"1.168E-06"	"1.051"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"505.03058"	"2017.10048"	"2017.10063"	"-0.07"	"-0.00004"	"11/138"	"11"	"138"	"724250.485229492"	"HCD"	"MS2"	"0"	"16.5"	"100.000"	"78.0890"	"26716"	"26716"	"26698"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"36.4"	""	"18.2"	""	"28.9"	""	"26.0"	"24.4"	""	"1285"	"18"	"38.000"	"31.000"	"1.09363684164376"	"14"	"0.0001686"	"0.001298"	"0.425"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"505.03058"	"2017.10048"	"2017.10063"	"-0.07"	"-0.00004"	"6/138"	"6"	"138"	"1409142.46325684"	"HCD"	"MS2"	"4.932892"	"27.6"	"100.000"	"79.3358"	"27251"	"27251"	"27228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.2"	""	"48.8"	""	"35.5"	""	"34.9"	""	"46.6"	"41.9"	""	"1285"	"17"	"38.000"	"31.000"	"1.24701917635336"	"14"	"0"	"0.0002888"	"0.559"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"673.03845"	"2017.10080"	"2017.10063"	"0.09"	"0.00006"	"14/138"	"14"	"138"	"1116759.11535645"	"HCD"	"MS2"	"11.81261"	"30.8"	"100.000"	"78.2043"	"26763"	"26763"	"26742"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.7"	""	"51.7"	""	"34.7"	""	"52.6"	"2.5"	"56.3"	"48.3"	""	"1285"	"39"	"38.000"	"31.000"	"0.00841149385527119"	"16"	"0"	"3.939E-07"	"1.149"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.03845"	"2017.10080"	"2017.10063"	"0.09"	"0.00006"	"9/138"	"9"	"138"	"3146795.18255615"	"HCD"	"MS2"	"25.15558"	"60.1"	"100.000"	"79.5847"	"27352"	"27352"	"27334"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.9"	""	"98.2"	""	"78.3"	""	"91.9"	""	"94.9"	"83.3"	""	"1285"	"39"	"38.000"	"31.000"	"0.00729244449069462"	"15"	"0"	"4.501E-07"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.03851"	"2017.10099"	"2017.10063"	"0.18"	"0.00012"	"14/138"	"14"	"138"	"1480249.23284912"	"HCD"	"MS2"	"9.683189"	"40.7"	"100.000"	"77.9901"	"26703"	"26703"	"26685"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.0"	""	"68.5"	""	"52.7"	""	"60.5"	""	"84.8"	"65.5"	""	"1283"	"27"	"38.000"	"31.000"	"0.130375702251559"	"14"	"0"	"7.07E-06"	"0.891"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.03864"	"2017.10135"	"2017.10063"	"0.36"	"0.00024"	"14/138"	"14"	"138"	"1463437.70806885"	"HCD"	"MS2"	"6.517658"	"35.6"	"100.000"	"78.2939"	"26826"	"26826"	"26807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.8"	""	"59.7"	""	"42.6"	""	"54.8"	"2.5"	"61.0"	"62.0"	""	"1282"	"45"	"38.000"	"31.000"	"0.00194472424906853"	"15"	"0"	"1.279E-06"	"1.043"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.03864"	"2017.10135"	"2017.10063"	"0.36"	"0.00024"	"17/138"	"17"	"138"	"2240739.51922607"	"HCD"	"MS2"	"36.31342"	"41.1"	"100.000"	"79.5089"	"27294"	"27294"	"27275"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.4"	""	"70.0"	""	"57.7"	""	"51.9"	"0.3"	"65.8"	"59.6"	""	"1282"	"33"	"38.000"	"31.000"	"0.0354697420007287"	"15"	"0"	"1.253E-06"	"1.045"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.9348"	"0.0000"	"1"	"1"	"1"	"673.03870"	"2017.10154"	"2017.10063"	"0.45"	"0.00030"	"17/138"	"17"	"138"	"3817308.08624268"	"HCD"	"MS2"	"15.09868"	"82.2"	"100.000"	"79.2900"	"27232"	"27232"	"27212"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"179.4"	""	"157.8"	""	"95.5"	""	"118.3"	"1.7"	"119.7"	"103.0"	""	"1282"	"46"	"38.000"	"31.000"	"0.00144496733498971"	"18"	"0"	"8.098E-08"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEDITHNGIVYTPK"	"[K].aEDITHnGIVYTPk.[Q]"	"N-Term(TMT6plex); N7(Deamidated); K14(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"673.03882"	"2017.10190"	"2017.10063"	"0.63"	"0.00042"	"13/138"	"13"	"138"	"1852555.96917725"	"HCD"	"MS2"	"11.67262"	"45.0"	"100.000"	"77.8817"	"26632"	"26632"	"26613"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"77.5"	""	"76.5"	""	"56.7"	""	"69.0"	"0.8"	"79.3"	"65.4"	""	"1285"	"51"	"38.000"	"31.000"	"0.000481807029496103"	"16"	"0"	"1.395E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNNHYAMEDVATR"	"[K].lIQNNHYAmEDVATR.[R]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"674.00916"	"2020.01291"	"2020.01194"	"0.48"	"0.00032"	"15/144"	"15"	"144"	"756685.813354492"	"HCD"	"MS2"	"0"	"26.6"	"100.000"	"46.9222"	"14067"	"14067"	"14051"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"30.6"	""	"30.2"	""	"54.9"	"1.7"	"58.2"	"49.9"	""	"988"	"29"	"36.000"	"29.000"	"0.0624779755650749"	"16"	"0"	"3.35E-05"	"0.752"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQNNHYAMEDVATR"	"[K].lIQNNHYAmEDVATR.[R]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.00952"	"2020.01401"	"2020.01194"	"1.03"	"0.00069"	"13/144"	"13"	"144"	"734948.884277344"	"HCD"	"MS2"	"0"	"25.8"	"100.000"	"46.5544"	"13955"	"13955"	"13938"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.3"	""	"28.0"	""	"28.8"	""	"52.9"	"3.3"	"55.0"	"45.2"	""	"984"	"28"	"36.000"	"29.000"	"0.0719391169832705"	"14"	"0"	"9.152E-05"	"0.662"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].sYELPDGQVITIGNER.[F]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9062"	"0.0000"	"1"	"1"	"1"	"674.02234"	"2020.05246"	"2020.05485"	"-1.18"	"-0.00080"	"17/164"	"17"	"164"	"1878355.9274292"	"HCD"	"MS2"	"5.105149"	"16.5"	"100.000"	"110.6093"	"39754"	"39754"	"39735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"20.9"	""	"23.0"	""	"28.2"	""	"28.8"	"32.1"	""	"1222"	"64"	"37.000"	"30.000"	"2.25445312726362E-05"	"23"	"0"	"4.54E-08"	"1.342"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].sYELPDGQVITIGNER.[F]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9744"	"0.0000"	"1"	"1"	"1"	"1010.53003"	"2020.05278"	"2020.05485"	"-1.02"	"-0.00103"	"11/164"	"11"	"164"	"651452.31854248"	"HCD"	"MS2"	"0"	"26.8"	"100.000"	"110.7183"	"39812"	"39812"	"39788"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.6"	""	"40.3"	""	"33.9"	""	"33.8"	""	"45.3"	"51.3"	""	"1224"	"39"	"37.000"	"30.000"	"0.00852611963402524"	"15"	"0"	"0.0001538"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].sYELPDGQVITIGNER.[F]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"2"	"2"	"0.9211"	"0.0000"	"1"	"1"	"1"	"1010.53052"	"2020.05376"	"2020.05485"	"-0.54"	"-0.00055"	"20/164"	"20"	"164"	"724447.212341309"	"HCD"	"MS2"	"0"	"31.8"	"100.000"	"110.6163"	"39757"	"39757"	"39735"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.9"	""	"48.1"	""	"40.5"	""	"39.6"	""	"56.7"	"57.2"	""	"1229"	"38"	"37.000"	"30.000"	"0.00976161977013334"	"17"	"0"	"1.939E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SYELPDGQVITIGNER"	"[K].sYELPDGQVITIGNER.[F]"	"N-Term(TMT6plex)"	"2"	"6"	"P60711; P68035"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1;Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P60711; P62738; P68136; P68035; P63259"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.02283"	"2020.05393"	"2020.05485"	"-0.46"	"-0.00031"	"18/164"	"18"	"164"	"2118568.63574219"	"HCD"	"MS2"	"0"	"17.9"	"100.000"	"110.7436"	"39822"	"39822"	"39804"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.9"	""	"22.3"	""	"22.2"	""	"28.8"	""	"34.9"	"34.5"	""	"1221"	"42"	"37.000"	"30.000"	"0.00421391400244467"	"15"	"0"	"7.072E-07"	"1.096"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFMGDYVDR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"0.3077"	"0.0000"	"1"	"1"	"1"	"674.65417"	"2021.94797"	"2021.94761"	"0.18"	"0.00012"	"9/158"	"9"	"158"	"260604.582336426"	"HCD"	"MS2"	"5.241344"	"9.9"	"100.000"	"111.3351"	"40050"	"40050"	"40023"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"7.9"	""	"11.6"	""	"20.1"	""	"22.7"	"23.2"	""	"598"	"13"	"34.000"	"27.000"	"1.36355037869437"	"22"	"0.0001991"	"0.002278"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFMGDYVDR.[G]"	"N-Term(TMT6plex)"	"1"	"2"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"0.3750"	"0.0000"	"1"	"1"	"1"	"674.65442"	"2021.94870"	"2021.94761"	"0.54"	"0.00037"	"9/158"	"9"	"158"	"174110.850585938"	"HCD"	"MS2"	"11.69577"	"8.1"	"100.000"	"111.4345"	"40104"	"40104"	"40076"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.1"	""	"8.6"	""	"8.6"	""	"15.0"	""	"15.3"	"18.7"	""	"606"	"8"	"34.000"	"27.000"	"4.88025627459016"	"18"	"0.0001991"	"0.005359"	"0.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"674.66968"	"2021.99448"	"2021.99773"	"-1.61"	"-0.00108"	"13/176"	"13"	"176"	"820755.37689209"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"94.7308"	"33430"	"33430"	"33418"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.9"	""	"15.9"	""	"18.6"	""	"20.3"	""	"23.0"	"23.1"	""	"914"	"42"	"36.000"	"29.000"	"0.00290346235856247"	"19"	"0"	"7.275E-06"	"0.888"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8846"	"0.0000"	"1"	"1"	"1"	"674.67017"	"2021.99594"	"2021.99773"	"-0.88"	"-0.00059"	"16/176"	"16"	"176"	"1092247.79656982"	"HCD"	"MS2"	"7.596352"	"10.6"	"100.000"	"94.6657"	"33438"	"33438"	"33423"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.0"	""	"16.2"	""	"12.4"	""	"15.8"	""	"19.6"	"19.6"	""	"929"	"52"	"36.000"	"29.000"	"0.00026362446921227"	"22"	"0"	"2.009E-06"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.67029"	"2021.99631"	"2021.99773"	"-0.70"	"-0.00047"	"14/176"	"14"	"176"	"1167141.38604736"	"HCD"	"MS2"	"11.02539"	"18.2"	"100.000"	"94.3524"	"33312"	"33312"	"33294"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.3"	""	"22.0"	""	"18.7"	""	"39.9"	""	"36.5"	"32.1"	""	"933"	"36"	"36.000"	"29.000"	"0.0115571738988593"	"15"	"0"	"6.593E-06"	"0.897"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"674.67035"	"2021.99649"	"2021.99773"	"-0.61"	"-0.00041"	"17/176"	"17"	"176"	"1493213.38952637"	"HCD"	"MS2"	"16.02177"	"16.1"	"100.000"	"94.4244"	"33306"	"33306"	"33287"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.2"	""	"20.6"	""	"21.8"	""	"25.9"	""	"25.6"	"31.8"	""	"933"	"49"	"36.000"	"29.000"	"0.000652907485980126"	"21"	"0"	"1.949E-06"	"1.006"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6522"	"0.0000"	"1"	"1"	"1"	"1011.50201"	"2021.99675"	"2021.99773"	"-0.48"	"-0.00049"	"5/176"	"5"	"176"	"311537.05065918"	"HCD"	"MS2"	"0"	"15.7"	"100.000"	"94.5829"	"33405"	"33405"	"33391"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.8"	""	"20.0"	""	"21.0"	""	"20.7"	""	"24.8"	"26.2"	""	"931"	"23"	"36.000"	"29.000"	"0.241501418121431"	"22"	"0"	"0.0001475"	"0.619"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.9487"	"0.0000"	"1"	"1"	"1"	"1011.50238"	"2021.99748"	"2021.99773"	"-0.12"	"-0.00012"	"7/176"	"7"	"176"	"90973.946105957"	"HCD"	"MS2"	"0"	"3.1"	"100.000"	"94.3252"	"33266"	"33266"	"33243"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.1"	""	"4.7"	""	"4.1"	""	"4.7"	""	"5.3"	"5.2"	""	"955"	"39"	"36.000"	"29.000"	"0.00576731106263488"	"17"	"0"	"0.0002158"	"0.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.6667"	"0.0000"	"1"	"1"	"1"	"1011.50269"	"2021.99809"	"2021.99773"	"0.18"	"0.00018"	"15/176"	"15"	"176"	"310765.80682373"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"94.6456"	"33396"	"33396"	"33380"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.3"	""	"18.6"	""	"19.0"	""	"15.9"	""	"19.9"	"18.9"	""	"969"	"30"	"36.000"	"29.000"	"0.0500372901091397"	"25"	"0"	"6.991E-05"	"0.686"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTNGTEER.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"1011.50299"	"2021.99870"	"2021.99773"	"0.48"	"0.00049"	"6/176"	"6"	"176"	"115000.993408203"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"94.3015"	"33292"	"33292"	"33262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"8.3"	""	"5.8"	""	"8.3"	""	"7.8"	"7.5"	""	"981"	"33"	"36.000"	"29.000"	"0.0225236625296484"	"19"	"0"	"5.384E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8571"	"0.0000"	"1"	"1"	"1"	"1011.99316"	"2022.97905"	"2022.98175"	"-1.33"	"-0.00135"	"5/176"	"5"	"176"	"70117.6042480469"	"HCD"	"MS2"	"0"	"3.2"	"100.000"	"98.2177"	"34873"	"34873"	"34856"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.5"	""	"6.1"	""	"3.6"	""	"4.9"	""	"3.3"	"5.0"	""	"830"	"28"	"36.000"	"29.000"	"0.0704771115771624"	"18"	"0.0001686"	"0.001593"	"0.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8684"	"0.0000"	"1"	"1"	"1"	"674.99811"	"2022.97977"	"2022.98175"	"-0.98"	"-0.00066"	"12/176"	"12"	"176"	"468901.401428223"	"HCD"	"MS2"	"21.90223"	"8.7"	"100.000"	"98.2268"	"34846"	"34846"	"34829"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.6"	""	"9.8"	""	"9.9"	""	"13.9"	""	"17.6"	"22.6"	""	"831"	"38"	"36.000"	"29.000"	"0.00738875094871173"	"20"	"0"	"1.982E-05"	"0.798"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8286"	"0.0000"	"1"	"1"	"1"	"674.99841"	"2022.98069"	"2022.98175"	"-0.52"	"-0.00035"	"12/176"	"12"	"176"	"407943.248840332"	"HCD"	"MS2"	"6.396388"	"9.6"	"100.000"	"100.4463"	"35746"	"35746"	"35724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"10.5"	""	"8.1"	""	"15.1"	""	"26.1"	"15.8"	""	"844"	"35"	"36.000"	"29.000"	"0.0120868310330058"	"21"	"0"	"8.627E-05"	"0.667"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"1011.99420"	"2022.98113"	"2022.98175"	"-0.31"	"-0.00031"	"4/176"	"4"	"176"	"80444.5106201172"	"HCD"	"MS2"	"0"	"4.5"	"100.000"	"98.1967"	"34834"	"34834"	"34813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.8"	""	"4.8"	""	"4.3"	""	"10.9"	""	"8.9"	"7.8"	""	"855"	"16"	"36.000"	"29.000"	"0.970367224180334"	"14"	"9.9E-05"	"0.0005042"	"0.509"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.8485"	"0.0000"	"1"	"1"	"1"	"1011.99445"	"2022.98161"	"2022.98175"	"-0.06"	"-0.00007"	"11/176"	"11"	"176"	"93314.7639770508"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"100.6135"	"35842"	"35842"	"35817"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.6"	""	"2.0"	""	"3.9"	""	"4.7"	""	"3.4"	"3.3"	""	"853"	"33"	"36.000"	"29.000"	"0.0236003821580512"	"19"	"0"	"1.471E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"0.7812"	"0.0000"	"1"	"1"	"1"	"1011.99469"	"2022.98210"	"2022.98175"	"0.18"	"0.00018"	"9/176"	"9"	"176"	"98539.7036132813"	"HCD"	"MS2"	"0"	"2.9"	"100.000"	"100.4647"	"35754"	"35754"	"35724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.4"	""	"2.6"	""	"4.3"	""	"2.1"	""	"6.2"	"5.1"	""	"865"	"32"	"36.000"	"29.000"	"0.0303379416566638"	"22"	"0"	"5.799E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"674.99902"	"2022.98252"	"2022.98175"	"0.38"	"0.00026"	"10/176"	"10"	"176"	"238661.555664063"	"HCD"	"MS2"	"8.841331"	"9.6"	"100.000"	"100.7488"	"35869"	"35869"	"35851"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"10.1"	""	"13.3"	""	"11.9"	""	"24.9"	"20.4"	""	"879"	"9"	"36.000"	"29.000"	"6.03891448018"	"13"	"0.00212"	"0.01936"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.8065"	"0.0000"	"1"	"1"	"1"	"674.99908"	"2022.98270"	"2022.98175"	"0.47"	"0.00032"	"12/176"	"12"	"176"	"388553.58026123"	"HCD"	"MS2"	"12.4493"	"8.0"	"100.000"	"100.5421"	"35813"	"35813"	"35785"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.1"	""	"9.9"	""	"6.0"	""	"13.5"	""	"24.4"	"14.1"	""	"879"	"31"	"36.000"	"29.000"	"0.0361375644651737"	"17"	"0"	"0.0001899"	"0.596"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"3"	"3"	"0.5676"	"0.0000"	"1"	"1"	"1"	"674.99908"	"2022.98270"	"2022.98175"	"0.47"	"0.00032"	"12/176"	"12"	"176"	"399168.820068359"	"HCD"	"MS2"	"16.10349"	"9.1"	"100.000"	"98.2409"	"34882"	"34882"	"34867"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.9"	""	"9.0"	""	"14.3"	""	"18.8"	""	"16.1"	"17.5"	""	"879"	"37"	"36.000"	"29.000"	"0.00948328667822597"	"21"	"0"	"0.0001093"	"0.646"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNFTLIPEGTNGTEER"	"[K].dNFTLIPEGTnGTEER.[M]"	"N-Term(TMT6plex); N11(Deamidated)"	"1"	"1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"P47942"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1011.99512"	"2022.98296"	"2022.98175"	"0.60"	"0.00061"	"6/176"	"6"	"176"	"72237.9989624023"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"98.5151"	"34963"	"34963"	"34943"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.5"	""	"4.2"	""	"2.1"	""	"5.3"	""	""	"5.8"	""	"877"	"12"	"36.000"	"29.000"	"2.64222378493606"	"13"	"0.001951"	"0.01704"	"0.193"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQATWAELSWPHEK"	"[K].SGAQATWAELSWPHEk.[V]"	"K16(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"676.34265"	"2027.01340"	"2027.01841"	"-2.47"	"-0.00167"	"6/172"	"6"	"172"	"363280.475708008"	"HCD"	"MS2"	"29.07565"	"14.1"	"100.000"	"96.4237"	"34149"	"34149"	"34126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.5"	""	"19.2"	""	"18.4"	""	"23.6"	""	"26.6"	"30.0"	""	"980"	"16"	"36.000"	"29.000"	"1.11223377742307"	"14"	"0.0001686"	"0.00119"	"0.432"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SGAQATWAELSWPHEK"	"[K].SGAQATWAELSWPHEk.[V]"	"K16(TMT6plex)"	"1"	"1"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"P20059"	"Hemopexin OS=Rattus norvegicus OX=10116 GN=Hpx PE=1 SV=3"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"676.34344"	"2027.01578"	"2027.01841"	"-1.29"	"-0.00087"	"5/172"	"5"	"172"	"321176.407836914"	"HCD"	"MS2"	"23.73908"	"13.1"	"100.000"	"96.4194"	"34115"	"34115"	"34098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"15.8"	""	"16.6"	""	"21.7"	""	"25.6"	"26.9"	""	"994"	"8"	"36.000"	"29.000"	"7.73314918907723"	"14"	"0.0005161"	"0.006707"	"0.278"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GENLVSMTVEGPPPK"	"[R].gENLVSmTVEGPPPk.[D]"	"N-Term(TMT6plex); M7(Oxidation); K15(TMT6plex)"	"1"	"2"	"P63164"	"Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"P17136; P63164"	"Small nuclear ribonucleoprotein-associated protein B OS=Rattus norvegicus OX=10116 GN=Snrpb PE=2 SV=2; Small nuclear ribonucleoprotein-associated protein N OS=Rattus norvegicus OX=10116 GN=Snrpn PE=2 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"677.03888"	"2029.10208"	"2029.10400"	"-0.94"	"-0.00064"	"9/152"	"9"	"152"	"297022.652038574"	"HCD"	"MS2"	"43.10845"	"13.6"	"100.000"	"82.1481"	"28394"	"28394"	"28366"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"15.0"	""	"18.5"	""	"25.5"	""	"25.2"	"25.9"	""	"1081"	"19"	"37.000"	"30.000"	"0.70598536503526"	"18"	"0.0001686"	"0.001068"	"0.442"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTQQPGSEITAPQK"	"[R].sVTQQPGSEITAPQk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.8070"	"0.0000"	"1"	"1"	"1"	"677.04944"	"2029.13376"	"2029.13299"	"0.38"	"0.00026"	"13/154"	"13"	"154"	"442221.945373535"	"HCD"	"MS2"	"10.56378"	"16.8"	"100.000"	"59.3618"	"19122"	"19122"	"19098"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"21.8"	""	"19.5"	""	"26.9"	""	"32.4"	"32.9"	""	"957"	"57"	"36.000"	"29.000"	"8.91008694893183E-05"	"27"	"0"	"7.903E-06"	"0.881"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVTQQPGSEITAPQK"	"[R].sVTQQPGSEITAPQk.[T]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"Q04462"	"Valine--tRNA ligase OS=Rattus norvegicus OX=10116 GN=Vars PE=2 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"677.04944"	"2029.13376"	"2029.13299"	"0.38"	"0.00026"	"11/154"	"11"	"154"	"444171.663818359"	"HCD"	"MS2"	"0"	"16.6"	"100.000"	"59.2075"	"19094"	"19094"	"19073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.4"	""	"21.2"	""	"23.2"	""	"29.4"	""	"30.7"	"30.6"	""	"957"	"21"	"36.000"	"29.000"	"0.407269551279837"	"15"	"9.9E-05"	"0.0004473"	"0.52"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YNAELESGNQFVLYR"	"[K].yNAELESGNQFVLYR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"P01048"	"T-kininogen 1 OS=Rattus norvegicus OX=10116 GN=Map1 PE=1 SV=2"	"0"	"3"	"3"	"0.8621"	"0.0000"	"1"	"1"	"1"	"678.01636"	"2032.03452"	"2032.03372"	"0.39"	"0.00027"	"10/144"	"10"	"144"	"128515.093994141"	"HCD"	"MS2"	"17.22972"	"4.6"	"100.000"	"105.7285"	"37887"	"37887"	"37865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.7"	""	"4.6"	""	"5.9"	""	"9.1"	""	"8.9"	"11.1"	""	"1166"	"29"	"37.000"	"30.000"	"0.0723883295326376"	"18"	"0"	"3.534E-05"	"0.747"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPTGQPGGELMLGGTDSR"	"[R].dPTGQPGGELmLGGTDSR.[Y]"	"N-Term(TMT6plex); M11(Oxidation)"	"1"	"1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"P24268"	"Cathepsin D OS=Rattus norvegicus OX=10116 GN=Ctsd PE=1 SV=1"	"0"	"2"	"2"	""	"0.0000"	"1"	"1"	"1"	"1016.99048"	"2032.97368"	"2032.98070"	"-3.45"	"-0.00351"	"4/194"	"4"	"194"	"68161.3010864258"	"HCD"	"MS2"	"0"	"0.8"	"100.000"	"65.6418"	"21705"	"21705"	"21680"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	""	""	""	""	""	""	"5.8"	""	"2.0"	""	""	"750"	"0"	"35.000"	"28.000"	"34.6761815226833"	"13"	"0.007259"	"0.0922"	"0.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIVMDPLGGSDTAK"	"[K].gVDIVMDPLGGSDTAk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8182"	"0.0000"	"1"	"1"	"1"	"1017.05249"	"2033.09770"	"2033.09891"	"-0.59"	"-0.00060"	"5/142"	"5"	"142"	"74220.1264648438"	"HCD"	"MS2"	"0"	"4.0"	"100.000"	"111.0649"	"39940"	"39940"	"39911"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.0"	""	"5.0"	""	"3.4"	""	"7.9"	""	"6.7"	"7.3"	""	"1209"	"11"	"37.000"	"30.000"	"4.74674941121788"	"15"	"0.003786"	"0.04097"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIVMDPLGGSDTAK"	"[K].gVDIVMDPLGGSDTAk.[G]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9630"	"0.0000"	"1"	"1"	"1"	"678.37097"	"2033.09836"	"2033.09891"	"-0.27"	"-0.00018"	"15/142"	"15"	"142"	"1223227.07678223"	"HCD"	"MS2"	"3.697952"	"41.2"	"100.000"	"111.0395"	"39929"	"39929"	"39911"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.9"	""	"54.6"	""	"79.7"	""	"56.5"	"1.3"	"59.2"	"73.1"	""	"1199"	"54"	"37.000"	"30.000"	"0.000256323950247876"	"18"	"0"	"1.402E-06"	"1.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDEDTIYHLQPSGR"	"[K].yLDEDTIYHLQPSGR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P13444; P18298"	"S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2; S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.34650"	"2036.02494"	"2036.02864"	"-1.82"	"-0.00123"	"13/140"	"13"	"140"	"493358.333679199"	"HCD"	"MS2"	"21.53169"	"10.6"	"100.000"	"94.2055"	"33217"	"33217"	"33195"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.5"	""	"13.7"	""	"10.8"	""	"17.7"	""	"21.8"	"20.7"	""	"1094"	"30"	"37.000"	"30.000"	"0.0566222765173601"	"14"	"0"	"2.234E-05"	"0.788"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDEDTIYHLQPSGR"	"[K].yLDEDTIYHLQPSGR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P13444; P18298"	"S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2; S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"3"	"3"	"0.8800"	"0.0000"	"1"	"1"	"1"	"679.34674"	"2036.02567"	"2036.02864"	"-1.46"	"-0.00099"	"14/140"	"14"	"140"	"313977.816894531"	"HCD"	"MS2"	"7.660506"	"11.5"	"100.000"	"94.4723"	"33361"	"33361"	"33342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"14.2"	""	"16.4"	""	"17.5"	""	"21.6"	"24.6"	""	"1104"	"25"	"37.000"	"30.000"	"0.175363448699867"	"17"	"0"	"2.829E-05"	"0.767"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDEDTIYHLQPSGR"	"[K].yLDEDTIYHLQPSGR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P13444; P18298"	"S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2; S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.34692"	"2036.02622"	"2036.02864"	"-1.19"	"-0.00081"	"13/140"	"13"	"140"	"285838.546264648"	"HCD"	"MS2"	"19.82636"	"12.5"	"100.000"	"94.5536"	"33359"	"33359"	"33335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.1"	""	"14.7"	""	"15.2"	""	"23.4"	""	"18.0"	"26.6"	""	"1101"	"19"	"37.000"	"30.000"	"0.632058568634034"	"14"	"0.0001686"	"0.001529"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLDEDTIYHLQPSGR"	"[K].yLDEDTIYHLQPSGR.[F]"	"N-Term(TMT6plex)"	"1"	"2"	"P18298"	"S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"P13444; P18298"	"S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2; S-adenosylmethionine synthase isoform type-2 OS=Rattus norvegicus OX=10116 GN=Mat2a PE=1 SV=1"	"0"	"3"	"3"	"0.9811"	"0.0000"	"1"	"1"	"1"	"679.34711"	"2036.02677"	"2036.02864"	"-0.92"	"-0.00062"	"13/140"	"13"	"140"	"518761.83581543"	"HCD"	"MS2"	"6.892839"	"11.7"	"100.000"	"94.1747"	"33240"	"33240"	"33220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.2"	""	"16.2"	""	"15.6"	""	"19.3"	""	"18.5"	"20.8"	""	"1107"	"53"	"37.000"	"30.000"	"0.000274231680610452"	"17"	"0"	"3.278E-07"	"1.165"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFmGDYVDR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"2"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.98431"	"2037.93839"	"2037.94252"	"-2.03"	"-0.00138"	"10/158"	"10"	"158"	"240254.85736084"	"HCD"	"MS2"	"35.66266"	"9.4"	"100.000"	"102.6220"	"36650"	"36650"	"36637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"13.7"	""	"16.5"	""	"10.9"	""	"17.1"	"19.4"	""	"461"	"8"	"33.000"	"26.000"	"3.47272928756044"	"13"	"0.0001991"	"0.00597"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFmGDYVDR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"2"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"679.98541"	"2037.94168"	"2037.94252"	"-0.41"	"-0.00028"	"11/158"	"11"	"158"	"220232.732055664"	"HCD"	"MS2"	"22.08279"	"8.0"	"100.000"	"102.4026"	"36538"	"36538"	"36517"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.3"	""	"9.1"	""	"9.8"	""	"13.8"	""	"14.9"	"20.2"	""	"485"	"27"	"33.000"	"26.000"	"0.0489453843192779"	"14"	"9.9E-05"	"0.0007385"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPDTNYLFMGDYVDR"	"[K].sPDTNYLFmGDYVDR.[G]"	"N-Term(TMT6plex); M9(Oxidation)"	"1"	"2"	"P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"P62716; P63331"	"Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus OX=10116 GN=Ppp2cb PE=2 SV=1; Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus OX=10116 GN=Ppp2ca PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1019.47528"	"2037.94328"	"2037.94252"	"0.37"	"0.00038"	"3/158"	"3"	"158"	"44078.5045166016"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"102.4371"	"36552"	"36552"	"36531"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"2.0"	""	"3.9"	""	"2.5"	""	"2.5"	""	"2.3"	""	""	"494"	"1"	"33.000"	"26.000"	"20.4973139576062"	"13"	"0.006267"	"0.0767"	"0.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAEDMEEEQAFK"	"[K].rPAEDMEEEQAFk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"680.01489"	"2038.03012"	"2038.03156"	"-0.71"	"-0.00048"	"11/130"	"11"	"130"	"574544.653381348"	"HCD"	"MS2"	"13.83675"	"33.3"	"100.000"	"54.8217"	"17315"	"17315"	"17290"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"46.2"	""	"30.0"	""	"36.4"	""	"65.5"	"0.5"	"78.8"	"58.6"	""	"1125"	"17"	"37.000"	"30.000"	"1.14057152973072"	"14"	"0"	"0.000243"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPAEDMEEEQAFK"	"[K].rPAEDMEEEQAFk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"P61980"	"Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus OX=10116 GN=Hnrnpk PE=1 SV=1"	"0"	"3"	"3"	"0.2000"	"0.0000"	"1"	"1"	"1"	"680.01501"	"2038.03049"	"2038.03156"	"-0.53"	"-0.00036"	"7/130"	"7"	"130"	"541965.66809082"	"HCD"	"MS2"	"0"	"32.2"	"100.000"	"55.0382"	"17369"	"17369"	"17351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.4"	""	"32.3"	""	"38.5"	""	"53.4"	""	"81.3"	"69.4"	""	"1128"	"10"	"37.000"	"30.000"	"5.47367621526456"	"21"	"0.0001991"	"0.004387"	"0.316"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEERPAPTPWGSK"	"[K].eVEERPAPTPWGSk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.04163"	"2041.11032"	"2041.11186"	"-0.75"	"-0.00051"	"11/146"	"11"	"146"	"1468155.6350708"	"HCD"	"MS2"	"9.942147"	"84.1"	"100.000"	"61.5473"	"20041"	"20041"	"20022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"154.0"	""	"109.7"	""	"103.8"	""	"131.6"	""	"151.3"	"151.3"	""	"1257"	"12"	"37.000"	"30.000"	"4.32817968252378"	"13"	"0.0001686"	"0.00121"	"0.431"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEERPAPTPWGSK"	"[K].eVEERPAPTPWGSk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.04193"	"2041.11124"	"2041.11186"	"-0.30"	"-0.00021"	"6/146"	"6"	"146"	"1820434.96337891"	"HCD"	"MS2"	"24.97065"	"113.7"	"100.000"	"61.2519"	"19923"	"19923"	"19900"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"195.4"	""	"161.4"	""	"139.4"	""	"166.8"	""	"200.6"	"214.4"	""	"1252"	"3"	"37.000"	"30.000"	"29.5511463831008"	"13"	"0.0001686"	"0.001899"	"0.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEERPAPTPWGSK"	"[K].eVEERPAPTPWGSk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"681.04211"	"2041.11179"	"2041.11186"	"-0.03"	"-0.00002"	"12/146"	"12"	"146"	"1171927.13092041"	"HCD"	"MS2"	"24.77795"	"67.7"	"100.000"	"61.6334"	"20043"	"20043"	"20021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"115.0"	""	"88.9"	""	"80.1"	""	"99.6"	""	"124.3"	"138.1"	""	"1241"	"12"	"37.000"	"30.000"	"3.52973243588604"	"13"	"0"	"0.0001402"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVEERPAPTPWGSK"	"[K].eVEERPAPTPWGSk.[M]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"3"	"681.04211"	"2041.11179"	"2041.11186"	"-0.03"	"-0.00002"	"6/146"	"6"	"146"	"2067642.88031006"	"HCD"	"MS2"	"17.96946"	"123.7"	"100.000"	"61.3279"	"19923"	"19923"	"19896"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"224.5"	""	"172.9"	""	"154.3"	""	"191.2"	""	"219.7"	"208.1"	""	"1241"	"1"	"37.000"	"30.000"	"46.4239175067172"	"13"	"0.0001686"	"0.001516"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGANGPTTPEADk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"681.37622"	"2042.11411"	"2042.11701"	"-1.42"	"-0.00097"	"14/160"	"14"	"160"	"1427930.17285156"	"HCD"	"MS2"	"2.549582"	"44.6"	"100.000"	"73.3130"	"24782"	"24782"	"24762"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.9"	""	"50.0"	""	"51.6"	""	"74.8"	"1.0"	"98.6"	"86.3"	""	"1179"	"53"	"37.000"	"30.000"	"0.000312236600174132"	"19"	"0"	"3.317E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IIAEGANGPTTPEADK"	"[K].iIAEGANGPTTPEADk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9672"	"0.0000"	"1"	"1"	"1"	"681.37762"	"2042.11832"	"2042.11701"	"0.64"	"0.00044"	"15/160"	"15"	"160"	"1382885.54760742"	"HCD"	"MS2"	"6.429421"	"40.0"	"100.000"	"73.4176"	"24854"	"24854"	"24835"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"53.1"	""	"50.3"	""	"53.1"	""	"63.1"	""	"76.6"	"83.7"	""	"1161"	"61"	"37.000"	"30.000"	"5.06759879349298E-05"	"18"	"0"	"3.842E-07"	"1.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTGGLGLAIEGPSEAK"	"[R].gAGTGGLGLAIEGPSEAk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"681.72076"	"2043.14774"	"2043.14864"	"-0.44"	"-0.00030"	"13/160"	"13"	"160"	"282652.390991211"	"HCD"	"MS2"	"23.29074"	"10.6"	"100.000"	"97.3379"	"34487"	"34487"	"34462"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.0"	""	"11.0"	""	"15.6"	""	"14.8"	""	"16.6"	"22.4"	""	"979"	"36"	"36.000"	"29.000"	"0.0123240285613796"	"19"	"0"	"6.089E-06"	"0.904"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAGTGGLGLAIEGPSEAK"	"[R].gAGTGGLGLAIEGPSEAk.[M]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"D3ZHA0"	"Filamin-C OS=Rattus norvegicus OX=10116 GN=Flnc PE=1 SV=1"	"0"	"3"	"3"	"0.8200"	"0.0000"	"1"	"1"	"1"	"681.72095"	"2043.14829"	"2043.14864"	"-0.17"	"-0.00012"	"14/160"	"14"	"160"	"277428.922119141"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"97.4283"	"34554"	"34554"	"34528"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.0"	""	"13.3"	""	"16.5"	""	"14.9"	""	"18.5"	"23.0"	""	"971"	"50"	"36.000"	"29.000"	"0.00048999227619023"	"25"	"0"	"3.065E-07"	"1.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIVMDPLGGSDTAK"	"[K].gVDIVmDPLGGSDTAk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.8400"	"0.0000"	"1"	"1"	"1"	"1025.04956"	"2049.09184"	"2049.09383"	"-0.97"	"-0.00099"	"11/142"	"11"	"142"	"116635.466430664"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"100.8376"	"35933"	"35933"	"35905"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.0"	""	"8.3"	""	"6.8"	""	"15.5"	""	"15.5"	"6.9"	""	"1338"	"25"	"38.000"	"31.000"	"0.196076758107247"	"18"	"0.0001686"	"0.001679"	"0.402"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIVMDPLGGSDTAK"	"[K].gVDIVmDPLGGSDTAk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"2"	"2"	"0.9091"	"0.0000"	"1"	"1"	"1"	"1025.04968"	"2049.09209"	"2049.09383"	"-0.85"	"-0.00087"	"11/142"	"11"	"142"	"140428.940612793"	"HCD"	"MS2"	"0"	"8.1"	"100.000"	"100.7209"	"35858"	"35858"	"35835"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"12.1"	""	"7.9"	""	"17.2"	""	"15.2"	"13.9"	""	"1357"	"22"	"38.000"	"31.000"	"0.399530420158767"	"16"	"9.9E-05"	"0.000718"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIVMDPLGGSDTAK"	"[K].gVDIVmDPLGGSDTAk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.9245"	"0.0000"	"1"	"1"	"1"	"683.70282"	"2049.09391"	"2049.09383"	"0.04"	"0.00003"	"15/142"	"15"	"142"	"727832.144042969"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"100.5709"	"35797"	"35797"	"35771"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.9"	""	"30.6"	""	"30.8"	""	"57.2"	"1.7"	"34.2"	"34.1"	""	"1342"	"53"	"38.000"	"31.000"	"0.000365361280057264"	"20"	"0"	"1.661E-07"	"1.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVDIVMDPLGGSDTAK"	"[K].gVDIVmDPLGGSDTAk.[G]"	"N-Term(TMT6plex); M6(Oxidation); K16(TMT6plex)"	"1"	"1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"Q3MIE4"	"Synaptic vesicle membrane protein VAT-1 homolog OS=Rattus norvegicus OX=10116 GN=Vat1 PE=1 SV=1"	"0"	"3"	"3"	"0.8814"	"0.0000"	"1"	"1"	"1"	"683.70313"	"2049.09482"	"2049.09383"	"0.49"	"0.00033"	"13/142"	"13"	"142"	"1459949.84503174"	"HCD"	"MS2"	"0"	"40.5"	"100.000"	"100.7474"	"35896"	"35896"	"35877"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"47.3"	""	"48.8"	""	"52.4"	""	"89.5"	""	"73.8"	"72.3"	""	"1338"	"59"	"38.000"	"31.000"	"8.48059098258899E-05"	"23"	"0"	"2.704E-07"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.70325"	"2049.09519"	"2049.10003"	"-2.36"	"-0.00161"	"13/148"	"13"	"148"	"240482.966674805"	"HCD"	"MS2"	"29.61511"	"6.7"	"100.000"	"87.1869"	"30424"	"30424"	"30406"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"8.3"	""	"8.8"	""	"12.8"	""	"11.3"	"12.7"	""	"1331"	"28"	"38.000"	"31.000"	"0.0966380281504643"	"14"	"0"	"7.147E-05"	"0.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.6667"	"0.0000"	"1"	"1"	"1"	"513.02985"	"2049.09755"	"2049.10003"	"-1.21"	"-0.00062"	"12/148"	"12"	"148"	"732896.13293457"	"HCD"	"MS2"	"14.72748"	"9.4"	"100.000"	"84.5506"	"29363"	"29363"	"29335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.2"	""	"11.3"	""	"8.5"	""	"14.0"	""	"22.4"	"21.7"	""	"1347"	"24"	"38.000"	"31.000"	"0.287301305912873"	"22"	"0"	"4.693E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"683.70416"	"2049.09793"	"2049.10003"	"-1.02"	"-0.00070"	"14/148"	"14"	"148"	"513633.425292969"	"HCD"	"MS2"	"21.69505"	"10.4"	"100.000"	"86.8892"	"30304"	"30304"	"30288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.6"	""	"10.6"	""	"15.6"	""	"17.6"	""	"22.0"	"19.7"	""	"1351"	"36"	"38.000"	"31.000"	"0.0185193335313729"	"18"	"0"	"1.2E-06"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8611"	"0.0000"	"1"	"1"	"1"	"683.70422"	"2049.09812"	"2049.10003"	"-0.93"	"-0.00064"	"18/148"	"18"	"148"	"1121717.12945557"	"HCD"	"MS2"	"7.305146"	"9.7"	"100.000"	"86.2086"	"30032"	"30032"	"30020"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.4"	""	"8.9"	""	"11.7"	""	"14.0"	""	"18.0"	"24.8"	""	"1352"	"72"	"38.000"	"31.000"	"4.01741499224126E-06"	"27"	"0"	"4.197E-09"	"1.554"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"683.70428"	"2049.09830"	"2049.10003"	"-0.84"	"-0.00058"	"18/148"	"18"	"148"	"645027.107299805"	"HCD"	"MS2"	"22.6642"	"9.5"	"100.000"	"86.6936"	"30192"	"30192"	"30170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.2"	""	"13.6"	""	"10.6"	""	"16.5"	""	"18.5"	"22.2"	""	"1351"	"38"	"38.000"	"31.000"	"0.0102241062331866"	"18"	"0"	"1.694E-06"	"1.018"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.5862"	"0.0000"	"1"	"1"	"1"	"513.03015"	"2049.09878"	"2049.10003"	"-0.61"	"-0.00031"	"13/148"	"13"	"148"	"587073.364074707"	"HCD"	"MS2"	"26.10181"	"9.9"	"100.000"	"84.3021"	"29234"	"29234"	"29209"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"11.7"	""	"12.5"	""	"17.0"	""	"18.5"	"24.1"	""	"1351"	"29"	"38.000"	"31.000"	"0.0911224427190663"	"27"	"0"	"2.515E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.9565"	"0.0000"	"1"	"1"	"1"	"513.03021"	"2049.09902"	"2049.10003"	"-0.49"	"-0.00025"	"13/148"	"13"	"148"	"1081522.87841797"	"HCD"	"MS2"	"27.24171"	"12.8"	"100.000"	"85.0546"	"29536"	"29536"	"29511"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.6"	""	"18.3"	""	"24.2"	""	"15.8"	""	"24.0"	"23.0"	""	"1350"	"23"	"38.000"	"31.000"	"0.307824918267125"	"15"	"0"	"9.227E-05"	"0.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"683.70459"	"2049.09922"	"2049.10003"	"-0.40"	"-0.00027"	"19/148"	"19"	"148"	"970211.352844238"	"HCD"	"MS2"	"9.097896"	"11.5"	"100.000"	"86.3820"	"30070"	"30070"	"30056"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"12.3"	""	"19.7"	""	"14.3"	""	"17.9"	"27.3"	""	"1349"	"52"	"38.000"	"31.000"	"0.000464495973884214"	"24"	"0"	"2.773E-08"	"1.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8302"	"0.0000"	"1"	"1"	"1"	"683.70459"	"2049.09922"	"2049.10003"	"-0.40"	"-0.00027"	"19/148"	"19"	"148"	"3088399.50579834"	"HCD"	"MS2"	"1.214253"	"17.3"	"100.000"	"84.9348"	"29488"	"29488"	"29472"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.5"	""	"28.9"	""	"16.7"	""	"22.2"	""	"37.5"	"31.3"	""	"1349"	"53"	"38.000"	"31.000"	"0.000322093495082112"	"25"	"0"	"7.898E-08"	"1.292"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.8000"	"0.0000"	"1"	"1"	"1"	"513.03027"	"2049.09926"	"2049.10003"	"-0.37"	"-0.00019"	"12/148"	"12"	"148"	"521631.717834473"	"HCD"	"MS2"	"17.957"	"10.2"	"100.000"	"84.1815"	"29213"	"29213"	"29196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.1"	""	"12.2"	""	"13.0"	"2.5"	"19.1"	""	"23.1"	"17.2"	""	"1346"	"30"	"38.000"	"31.000"	"0.0639757026130678"	"20"	"0"	"4.25E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.9333"	"0.0000"	"1"	"1"	"1"	"513.03027"	"2049.09926"	"2049.10003"	"-0.37"	"-0.00019"	"13/148"	"13"	"148"	"1033329.7734375"	"HCD"	"MS2"	"24.50982"	"12.5"	"100.000"	"84.9892"	"29539"	"29539"	"29515"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.9"	""	"17.3"	""	"16.5"	""	"19.9"	""	"22.0"	"26.9"	""	"1346"	"30"	"38.000"	"31.000"	"0.0693449859057207"	"17"	"0"	"2.124E-05"	"0.792"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"683.70465"	"2049.09940"	"2049.10003"	"-0.31"	"-0.00021"	"18/148"	"18"	"148"	"1679112.54376221"	"HCD"	"MS2"	"7.221763"	"16.1"	"100.000"	"85.8906"	"29904"	"29904"	"29887"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.6"	""	"21.4"	""	"25.7"	""	"24.1"	""	"27.2"	"29.6"	""	"1348"	"52"	"38.000"	"31.000"	"0.000441224781321343"	"24"	"0"	"1.541E-08"	"1.438"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8030"	"0.0000"	"1"	"1"	"1"	"683.70465"	"2049.09940"	"2049.10003"	"-0.31"	"-0.00021"	"19/148"	"19"	"148"	"2955208.50708008"	"HCD"	"MS2"	"0.5603397"	"16.0"	"100.000"	"85.0056"	"29546"	"29546"	"29531"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"24.6"	""	"19.8"	""	"19.1"	""	"33.6"	"33.9"	""	"1348"	"66"	"38.000"	"31.000"	"1.87784566765647E-05"	"30"	"0"	"1.743E-09"	"1.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8194"	"0.0000"	"1"	"1"	"1"	"683.70465"	"2049.09940"	"2049.10003"	"-0.31"	"-0.00021"	"19/148"	"19"	"148"	"3002139.48529053"	"HCD"	"MS2"	"1.515979"	"13.6"	"100.000"	"84.7172"	"29430"	"29430"	"29421"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"19.3"	""	"19.4"	""	"16.9"	""	"26.0"	"26.0"	""	"1348"	"72"	"38.000"	"31.000"	"4.11774924786356E-06"	"30"	"0"	"1.153E-09"	"1.67"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8600"	"0.0000"	"1"	"1"	"1"	"683.70465"	"2049.09940"	"2049.10003"	"-0.31"	"-0.00021"	"16/148"	"16"	"148"	"2674514.83764648"	"HCD"	"MS2"	"1.92266"	"15.9"	"100.000"	"85.2299"	"29608"	"29608"	"29591"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.7"	""	"17.9"	""	"26.6"	""	"18.8"	""	"28.7"	"33.9"	""	"1348"	"50"	"38.000"	"31.000"	"0.00071558280555194"	"23"	"0"	"5.699E-08"	"1.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	""	"0.0000"	"3"	"3"	"3"	"513.03033"	"2049.09951"	"2049.10003"	"-0.25"	"-0.00013"	"4/148"	"4"	"148"	"319261.412536621"	"HCD"	"MS2"	"25.29968"	"9.0"	"100.000"	"86.2570"	"30052"	"30052"	"30030"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"8.9"	""	"12.9"	""	"16.7"	""	"20.4"	"17.3"	""	"1352"	"7"	"38.000"	"31.000"	"14.4526237250351"	"17"	"0.001453"	"0.01185"	"0.226"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8056"	"0.0000"	"1"	"1"	"1"	"683.70471"	"2049.09958"	"2049.10003"	"-0.22"	"-0.00015"	"19/148"	"19"	"148"	"2960513.23022461"	"HCD"	"MS2"	"2.033517"	"12.5"	"100.000"	"84.6554"	"29377"	"29377"	"29363"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"15.0"	""	"15.6"	""	"17.9"	""	"19.5"	"29.9"	""	"1347"	"72"	"38.000"	"31.000"	"4.12417988826635E-06"	"31"	"0"	"9.851E-10"	"1.684"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"683.70477"	"2049.09977"	"2049.10003"	"-0.13"	"-0.00009"	"17/148"	"17"	"148"	"1042726.98980713"	"HCD"	"MS2"	"12.94327"	"17.2"	"100.000"	"83.8631"	"29085"	"29085"	"29073"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.8"	""	"16.4"	""	"21.2"	""	"29.9"	""	"37.5"	"36.5"	""	"1347"	"37"	"38.000"	"31.000"	"0.0131322033793704"	"16"	"0"	"2.197E-07"	"1.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7794"	"0.0000"	"1"	"1"	"1"	"683.70477"	"2049.09977"	"2049.10003"	"-0.13"	"-0.00009"	"18/148"	"18"	"148"	"1579080.40075684"	"HCD"	"MS2"	"3.635103"	"10.1"	"100.000"	"84.0921"	"29148"	"29148"	"29131"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.0"	""	"11.9"	""	"14.8"	""	"20.5"	""	"18.5"	"18.0"	""	"1347"	"68"	"38.000"	"31.000"	"9.60146714291076E-06"	""	"0"	"1.038E-08"	"1.473"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7917"	"0.0000"	"1"	"1"	"1"	"683.70477"	"2049.09977"	"2049.10003"	"-0.13"	"-0.00009"	"18/148"	"18"	"148"	"2432149.74407959"	"HCD"	"MS2"	"7.355163"	"15.5"	"100.000"	"85.5064"	"29720"	"29720"	"29705"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.8"	""	"20.6"	""	"20.6"	""	"19.5"	""	"31.7"	"28.0"	""	"1347"	"72"	"38.000"	"31.000"	"4.21053808584424E-06"	""	"0"	"1.267E-09"	"1.661"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8627"	"0.0000"	"1"	"1"	"1"	"683.70477"	"2049.09977"	"2049.10003"	"-0.13"	"-0.00009"	"19/148"	"19"	"148"	"1804306.08557129"	"HCD"	"MS2"	"5.84854"	"15.9"	"100.000"	"85.8174"	"29845"	"29845"	"29834"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"18.7"	""	"24.3"	""	"24.8"	""	"32.7"	"28.8"	""	"1347"	"51"	"38.000"	"31.000"	"0.000522802433049424"	"23"	"0"	"1.197E-08"	"1.461"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"683.70483"	"2049.09995"	"2049.10003"	"-0.04"	"-0.00003"	"20/148"	"20"	"148"	"784613.44519043"	"HCD"	"MS2"	"39.31072"	"8.3"	"100.000"	"86.5298"	"30128"	"30128"	"30119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"10.2"	""	"12.3"	""	"12.2"	""	"16.6"	"17.7"	""	"1335"	"60"	"38.000"	"31.000"	"6.92550217558523E-05"	"26"	"0"	"1.138E-08"	"1.465"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9783"	"0.0000"	"1"	"1"	"1"	"683.70483"	"2049.09995"	"2049.10003"	"-0.04"	"-0.00003"	"16/148"	"16"	"148"	"805779.635437012"	"HCD"	"MS2"	"15.46556"	"10.6"	"100.000"	"86.4948"	"30146"	"30146"	"30135"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.3"	""	"12.8"	""	"12.0"	""	"17.0"	""	"23.6"	"19.6"	""	"1335"	"46"	"38.000"	"31.000"	"0.00171179309437558"	"17"	"0"	"3.888E-07"	"1.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"683.70483"	"2049.09995"	"2049.10003"	"-0.04"	"-0.00003"	"19/148"	"19"	"148"	"2430469.72869873"	"HCD"	"MS2"	"1.023698"	"14.3"	"100.000"	"84.4448"	"29320"	"29320"	"29308"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"17.1"	""	"21.0"	""	"18.6"	""	"27.9"	"31.2"	""	"1335"	"60"	"38.000"	"31.000"	"6.41876195821096E-05"	"27"	"0"	"5.714E-09"	"1.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8644"	"0.0000"	"1"	"1"	"1"	"683.70483"	"2049.09995"	"2049.10003"	"-0.04"	"-0.00003"	"17/148"	"17"	"148"	"2773502.80407715"	"HCD"	"MS2"	"1.804935"	"16.1"	"100.000"	"85.3098"	"29670"	"29670"	"29653"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.4"	""	"23.2"	""	"20.7"	""	"20.9"	""	"33.0"	"29.8"	""	"1335"	"59"	"38.000"	"31.000"	"8.24994911824211E-05"	"25"	"0"	"8.176E-09"	"1.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.8889"	"0.0000"	"1"	"1"	"1"	"513.03052"	"2049.10024"	"2049.10003"	"0.10"	"0.00005"	"12/148"	"12"	"148"	"424210.557250977"	"HCD"	"MS2"	"34.81197"	"7.9"	"100.000"	"86.0271"	"29929"	"29929"	"29910"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.1"	""	"13.7"	""	"6.2"	""	"14.2"	""	"15.7"	"19.8"	""	"1334"	"27"	"38.000"	"31.000"	"0.126801921270884"	"17"	"0"	"0.000236"	"0.577"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"4"	"4"	"0.9615"	"0.0000"	"1"	"1"	"1"	"513.03052"	"2049.10024"	"2049.10003"	"0.10"	"0.00005"	"13/148"	"13"	"148"	"691766.86138916"	"HCD"	"MS2"	"58.50642"	"9.7"	"100.000"	"85.6253"	"29796"	"29796"	"29780"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"11.6"	""	"13.4"	""	"17.4"	""	"17.1"	"20.5"	""	"1334"	"26"	"38.000"	"31.000"	"0.162228007405223"	"15"	"0"	"4.723E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"683.70496"	"2049.10031"	"2049.10003"	"0.14"	"0.00010"	"18/148"	"18"	"148"	"872197.455383301"	"HCD"	"MS2"	"20.03196"	"20.0"	"100.000"	"83.7925"	"29027"	"29027"	"29009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.1"	""	"23.9"	""	"25.2"	""	"38.9"	""	"40.7"	"41.3"	""	"1336"	"40"	"38.000"	"31.000"	"0.00681987575116732"	"17"	"0"	"2.066E-07"	"1.206"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"683.70496"	"2049.10031"	"2049.10003"	"0.14"	"0.00010"	"18/148"	"18"	"148"	"1908223.96362305"	"HCD"	"MS2"	"1.873026"	"13.1"	"100.000"	"84.1586"	"29204"	"29204"	"29196"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.4"	""	"17.5"	""	"17.8"	""	"21.5"	""	"28.4"	"23.3"	""	"1336"	"55"	"38.000"	"31.000"	"0.00019443590348685"	"25"	"0"	"2.611E-08"	"1.391"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8116"	"0.0000"	"1"	"1"	"1"	"683.70496"	"2049.10031"	"2049.10003"	"0.14"	"0.00010"	"18/148"	"18"	"148"	"2492248.72454834"	"HCD"	"MS2"	"2.75059"	"13.0"	"100.000"	"84.3806"	"29265"	"29265"	"29251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.1"	""	"18.3"	""	"21.8"	""	"13.8"	""	"22.5"	"31.0"	""	"1336"	"69"	"38.000"	"31.000"	"8.92845805053025E-06"	"30"	"0"	"8.895E-09"	"1.487"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"683.70514"	"2049.10086"	"2049.10003"	"0.41"	"0.00028"	"18/148"	"18"	"148"	"1345925.04760742"	"HCD"	"MS2"	"5.701649"	"13.1"	"100.000"	"86.0987"	"29958"	"29958"	"29945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"16.5"	""	"21.2"	""	"19.1"	""	"23.4"	"25.8"	""	"1344"	"50"	"38.000"	"31.000"	"0.00069082695234099"	"24"	"0"	"5.945E-08"	"1.318"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAMTELPPTHPIR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8082"	"0.0000"	"1"	"1"	"1"	"683.70544"	"2049.10178"	"2049.10003"	"0.86"	"0.00058"	"11/148"	"11"	"148"	"2378587.46386719"	"HCD"	"MS2"	"7.697207"	"16.7"	"100.000"	"85.5907"	"29782"	"29782"	"29772"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"20.8"	""	"23.3"	""	"20.4"	""	"39.3"	"32.3"	""	"1347"	"73"	"38.000"	"31.000"	"3.09269861645631E-06"	"31"	"0"	"1.174E-09"	"1.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"683.99945"	"2049.98380"	"2049.99014"	"-3.09"	"-0.00211"	"14/134"	"14"	"134"	"859448.819519043"	"HCD"	"MS2"	"47.96033"	"13.3"	"100.000"	"96.0571"	"33969"	"33969"	"33945"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.7"	""	"11.1"	""	"17.2"	""	"24.8"	""	"27.6"	"28.9"	""	"802"	"46"	"36.000"	"29.000"	"0.000984338275189697"	"15"	"0"	"2.629E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"0.7037"	"0.0000"	"1"	"1"	"1"	"683.99951"	"2049.98398"	"2049.99014"	"-3.00"	"-0.00205"	"15/134"	"15"	"134"	"838496.946899414"	"HCD"	"MS2"	"26.18089"	"13.0"	"100.000"	"96.1213"	"34027"	"34027"	"34006"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"12.9"	""	"16.2"	""	"21.9"	""	"29.7"	"31.5"	""	"803"	"27"	"36.000"	"29.000"	"0.0854447826962059"	"22"	"0"	"1.041E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.00110"	"2049.98874"	"2049.99014"	"-0.68"	"-0.00047"	"15/134"	"15"	"134"	"1451164.36077881"	"HCD"	"MS2"	"2.601204"	"15.5"	"100.000"	"96.3456"	"34085"	"34085"	"34066"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"14.9"	""	"13.6"	""	"28.3"	""	"39.2"	"37.3"	""	"838"	"48"	"36.000"	"29.000"	"0.000631268360732245"	"16"	"0"	"4.88E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.00116"	"2049.98893"	"2049.99014"	"-0.59"	"-0.00041"	"15/134"	"15"	"134"	"1485892.05828857"	"HCD"	"MS2"	"1.085259"	"15.4"	"100.000"	"96.4009"	"34140"	"34140"	"34126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.9"	""	"17.6"	""	"13.4"	""	"27.5"	""	"34.3"	"36.5"	""	"852"	"47"	"36.000"	"29.000"	"0.000949313373589149"	"15"	"0"	"3.029E-06"	"0.966"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.00134"	"2049.98948"	"2049.99014"	"-0.33"	"-0.00022"	"11/134"	"11"	"134"	"209547.014587402"	"HCD"	"MS2"	"11.5953"	"6.7"	"100.000"	"96.6966"	"34258"	"34258"	"34235"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"10.0"	""	"8.4"	""	"10.1"	""	"10.3"	"15.1"	""	"851"	"15"	"36.000"	"29.000"	"1.30286544103538"	"13"	"0.0001991"	"0.002501"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.01404"	"2050.02756"	"2049.99014"	"18.25"	"0.01247"	"14/134"	"14"	"134"	"726500.297790527"	"HCD"	"MS2"	"39.61647"	"13.7"	"100.000"	"96.0270"	"33957"	"33957"	"33929"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"19.1"	""	"11.7"	""	"22.6"	""	"29.7"	"36.7"	""	"1054"	"23"	"37.000"	"30.000"	"0.290275656005647"	"14"	"0.0001686"	"0.001522"	"0.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTDQASMPDNTAAQK"	"[R].nTDQASMPDNTAAQk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"2"	"2"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3;Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"Q62812; Q63862"	"Myosin-9 OS=Rattus norvegicus OX=10116 GN=Myh9 PE=1 SV=3; Myosin-11 (Fragments) OS=Rattus norvegicus OX=10116 GN=Myh11 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.01422"	"2050.02811"	"2050.02754"	"0.28"	"0.00019"	"10/158"	"10"	"158"	"263915.506408691"	"HCD"	"MS2"	"56.9317"	"15.6"	"100.000"	"42.2743"	"12182"	"12182"	"12152"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.8"	""	"23.4"	""	"22.4"	""	"22.0"	""	"32.8"	"28.8"	""	"1071"	"14"	"37.000"	"30.000"	"2.27907950233119"	"13"	"0.0001991"	"0.002662"	"0.36"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YMGLPTPEDNLDHYR"	"[R].yMGLPTPEDNLDHYR.[N]"	"N-Term(TMT6plex)"	"1"	"1"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"P14740"	"Dipeptidyl peptidase 4 OS=Rattus norvegicus OX=10116 GN=Dpp4 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.01508"	"2050.03067"	"2049.99014"	"19.77"	"0.01351"	"13/134"	"13"	"134"	"571145.681274414"	"HCD"	"MS2"	"41.24344"	"13.1"	"100.000"	"96.0567"	"34001"	"34001"	"33974"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.8"	""	"13.7"	""	"14.0"	""	"23.1"	""	"26.0"	"32.9"	""	"1099"	"11"	"37.000"	"30.000"	"4.12066868028184"	"13"	"0.0005161"	"0.006587"	"0.279"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNDPVTFTDKPTR"	"[K].nSNDPVTFTDkPTR.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.03778"	"2050.09879"	"2050.09694"	"0.90"	"0.00062"	"14/152"	"14"	"152"	"900128.210205078"	"HCD"	"MS2"	"0"	"52.8"	"100.000"	"50.6612"	"15623"	"15623"	"15610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"59.9"	""	"58.0"	""	"99.9"	""	"126.8"	"113.0"	""	"1314"	"17"	"38.000"	"31.000"	"1.30787238371458"	"14"	"0"	"9.809E-05"	"0.656"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSNDPVTFTDKPTR"	"[K].nSNDPVTFTDkPTR.[D]"	"N-Term(TMT6plex); K11(TMT6plex)"	"1"	"1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"Q3SWT0"	"Platelet endothelial cell adhesion molecule OS=Rattus norvegicus OX=10116 GN=Pecam1 PE=1 SV=1"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"684.03790"	"2050.09916"	"2050.09694"	"1.08"	"0.00074"	"15/152"	"15"	"152"	"855984.119384766"	"HCD"	"MS2"	"0"	"51.6"	"100.000"	"51.0257"	"15738"	"15738"	"15717"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"57.0"	""	"53.3"	""	"59.0"	""	"102.8"	""	"117.6"	"104.3"	""	"1311"	"24"	"38.000"	"31.000"	"0.267037772100596"	"15"	"0"	"0.0001143"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDALSSDTSGHFK"	"[K].sLEDALSSDTSGHFk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"684.69324"	"2052.06516"	"2052.06497"	"0.09"	"0.00006"	"16/132"	"16"	"132"	"452201.786193848"	"HCD"	"MS2"	"5.286215"	"18.9"	"100.000"	"92.4137"	"32532"	"32532"	"32513"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.7"	""	"19.7"	""	"21.5"	""	"38.6"	""	"36.0"	"36.8"	""	"1296"	"42"	"38.000"	"31.000"	"0.0042714468411832"	"19"	"0"	"2.004E-06"	"1.003"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDALSSDTSGHFK"	"[K].sLEDALSSDTSGHFk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9211"	"0.0000"	"1"	"1"	"1"	"684.69336"	"2052.06552"	"2052.06497"	"0.27"	"0.00018"	"15/132"	"15"	"132"	"506317.166564941"	"HCD"	"MS2"	"19.91078"	"20.7"	"100.000"	"92.1005"	"32405"	"32405"	"32382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.9"	""	"25.2"	""	"19.7"	""	"33.1"	""	"36.4"	"46.2"	""	"1285"	"76"	"38.000"	"31.000"	"1.6860604141245E-06"	"23"	"0"	"1.619E-08"	"1.434"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDALSSDTSGHFK"	"[K].sLEDALSSDTSGHFk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"4"	"4"	"0.9412"	"0.0000"	"1"	"1"	"1"	"513.77209"	"2052.06655"	"2052.06497"	"0.77"	"0.00039"	"16/132"	"16"	"132"	"625588.986328125"	"HCD"	"MS2"	"19.54367"	"13.6"	"100.000"	"92.4148"	"32497"	"32497"	"32473"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.6"	""	"17.5"	""	"13.6"	""	"24.2"	""	"28.7"	"28.3"	""	"1298"	"34"	"38.000"	"31.000"	"0.0246742918212044"	"17"	"0"	"6.853E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLEDALSSDTSGHFK"	"[K].sLEDALSSDTSGHFk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"P48037"	"Annexin A6 OS=Rattus norvegicus OX=10116 GN=Anxa6 PE=1 SV=2"	"0"	"3"	"3"	"0.9298"	"0.0000"	"1"	"1"	"1"	"684.69495"	"2052.07029"	"2052.06497"	"2.59"	"0.00177"	"16/132"	"16"	"132"	"473181.904602051"	"HCD"	"MS2"	"27.44604"	"18.1"	"100.000"	"92.1705"	"32398"	"32398"	"32379"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"18.0"	""	"23.1"	""	"29.9"	""	"34.8"	"36.5"	""	"1291"	"57"	"38.000"	"31.000"	"0.000141545558576871"	"20"	"0"	"1.254E-07"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNAGGETQTTDKK"	"[R].dNAGGETQTTDkk.[D]"	"N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64294"	"Podoplanin OS=Rattus norvegicus OX=10116 GN=Pdpn PE=1 SV=1"	"Q64294"	"Podoplanin OS=Rattus norvegicus OX=10116 GN=Pdpn PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"684.70972"	"2052.11460"	"2052.11762"	"-1.47"	"-0.00101"	"5/138"	"5"	"138"	"317322.664245605"	"HCD"	"MS2"	"0"	"25.2"	"100.000"	"27.9370"	"6430"	"6430"	"6408"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.8"	""	"32.2"	""	"40.4"	""	"36.6"	""	"52.4"	"31.9"	""	"1203"	"12"	"37.000"	"30.000"	"4.1327166666856"	"13"	"0.001103"	"0.00911"	"0.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DNAGGETQTTDKK"	"[R].dNAGGETQTTDkk.[D]"	"N-Term(TMT6plex); K12(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q64294"	"Podoplanin OS=Rattus norvegicus OX=10116 GN=Pdpn PE=1 SV=1"	"Q64294"	"Podoplanin OS=Rattus norvegicus OX=10116 GN=Pdpn PE=1 SV=1"	"1"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"684.71014"	"2052.11588"	"2052.11762"	"-0.85"	"-0.00058"	"13/138"	"13"	"138"	"409877.958007813"	"HCD"	"MS2"	"0"	"30.0"	"100.000"	"28.1858"	"6488"	"6488"	"6465"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.6"	""	"33.4"	""	"41.8"	""	"45.7"	""	"63.4"	"46.5"	""	"1202"	"15"	"37.000"	"30.000"	"1.95377465728646"	"15"	"0.0001991"	"0.003764"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDFENPVPYSGAVK"	"[R].dGDFENPVPYSGAVk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"3"	"3"	"0.9697"	"0.0000"	"1"	"1"	"1"	"685.02588"	"2053.06308"	"2053.06424"	"-0.56"	"-0.00039"	"12/150"	"12"	"150"	"525902.946594238"	"HCD"	"MS2"	"1.661746"	"17.6"	"100.000"	"97.2417"	"34478"	"34478"	"34458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"18.2"	""	"23.2"	""	"30.0"	""	"31.2"	"35.9"	""	"1189"	"33"	"37.000"	"30.000"	"0.0285858992653364"	"15"	"0"	"0.0001442"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGDFENPVPYSGAVK"	"[R].dGDFENPVPYSGAVk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"P52555"	"Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"685.02612"	"2053.06382"	"2053.06424"	"-0.21"	"-0.00014"	"12/150"	"12"	"150"	"570042.975402832"	"HCD"	"MS2"	"4.628525"	"18.1"	"100.000"	"97.1534"	"34412"	"34412"	"34393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"22.7"	""	"23.2"	""	"30.4"	""	"35.2"	"28.5"	""	"1176"	"28"	"37.000"	"30.000"	"0.0853841631141592"	"14"	"0"	"0.0001142"	"0.642"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILEPPEGQDEGVWK"	"[K].iLEPPEGQDEGVWk.[Y]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9QYW3"	"MOB-like protein phocein OS=Rattus norvegicus OX=10116 GN=Mob4 PE=1 SV=1"	"Q9QYW3"	"MOB-like protein phocein OS=Rattus norvegicus OX=10116 GN=Mob4 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"685.71082"	"2055.11789"	"2055.11628"	"0.79"	"0.00054"	"5/130"	"5"	"130"	"151729.40435791"	"HCD"	"MS2"	"16.53411"	"8.1"	"100.000"	"109.8926"	"39465"	"39465"	"39445"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.4"	""	"12.1"	""	"10.0"	""	"13.2"	""	"12.4"	"20.3"	""	"1218"	"10"	"37.000"	"30.000"	"6.00644206749406"	"19"	"0.0001991"	"0.004148"	"0.321"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMDPNIVGSEHYDVAR"	"[R].imDPNIVGSEHYDVAR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.67969"	"2061.02451"	"2061.02726"	"-1.33"	"-0.00092"	"15/162"	"15"	"162"	"887932.403198242"	"HCD"	"MS2"	"19.9011"	"34.6"	"100.000"	"72.2710"	"24358"	"24358"	"24336"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.2"	""	"44.0"	""	"45.2"	""	"55.0"	""	"72.9"	"76.7"	""	"979"	"28"	"36.000"	"29.000"	"0.0699443592691184"	"14"	"0"	"6.935E-05"	"0.687"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IMDPNIVGSEHYDVAR"	"[R].imDPNIVGSEHYDVAR.[G]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"P10719"	"ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.68030"	"2061.02634"	"2061.02726"	"-0.44"	"-0.00031"	"12/162"	"12"	"162"	"770531.713684082"	"HCD"	"MS2"	"21.73001"	"31.7"	"100.000"	"72.4042"	"24442"	"24442"	"24418"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.2"	""	"32.0"	""	"40.1"	""	"55.4"	""	"58.9"	"71.4"	""	"1014"	"28"	"37.000"	"30.000"	"0.0792515854818964"	"14"	"0"	"0.0001108"	"0.645"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEIEGTGPPQAQLLWR"	"[R].hEIEGTGPPQAQLLWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.70715"	"2061.10691"	"2061.10789"	"-0.48"	"-0.00033"	"17/140"	"17"	"140"	"1318355.90307617"	"HCD"	"MS2"	"10.14723"	"28.8"	"100.000"	"89.2093"	"31242"	"31242"	"31228"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"44.2"	""	"34.7"	""	"39.2"	""	"52.1"	"0.5"	"50.0"	"51.6"	""	"1259"	"42"	"37.000"	"31.000"	"0.00413995608615237"	"15"	"0"	"9.318E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEIEGTGPPQAQLLWR"	"[R].hEIEGTGPPQAQLLWR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"B4F7E8"	"Niban-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fam129b PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"687.70764"	"2061.10837"	"2061.10789"	"0.23"	"0.00016"	"18/140"	"18"	"140"	"1375603.55584717"	"HCD"	"MS2"	"5.675581"	"27.5"	"100.000"	"89.3601"	"31263"	"31263"	"31251"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.2"	""	"29.4"	""	"40.6"	""	"52.5"	""	"51.3"	"52.5"	""	"1232"	"48"	"37.000"	"30.000"	"0.00108537724458956"	"15"	"0"	"3.161E-07"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEQILVLDPPSDLK"	"[K].hEQILVLDPPSDLk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"0.9024"	"0.0000"	"1"	"1"	"1"	"688.06848"	"2062.19089"	"2062.19486"	"-1.93"	"-0.00132"	"10/146"	"10"	"146"	"201973.91796875"	"HCD"	"MS2"	"61.2186"	"10.3"	"100.000"	"100.2788"	"35706"	"35706"	"35678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.0"	""	"13.0"	""	"10.5"	""	"15.5"	""	"17.4"	"20.3"	""	"888"	"41"	"36.000"	"29.000"	"0.00379649620520799"	"19"	"0"	"6.132E-06"	"0.903"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEQILVLDPPSDLK"	"[K].hEQILVLDPPSDLk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"Q9Z270"	"Vesicle-associated membrane protein-associated protein A OS=Rattus norvegicus OX=10116 GN=Vapa PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"688.07019"	"2062.19602"	"2062.19486"	"0.56"	"0.00039"	"10/146"	"10"	"146"	"207505.583557129"	"HCD"	"MS2"	"72.98039"	"10.7"	"100.000"	"100.1646"	"35632"	"35632"	"35604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"12.7"	""	"15.5"	""	"16.0"	""	"16.1"	"22.4"	""	"875"	"32"	"36.000"	"29.000"	"0.0263013510148934"	"15"	"0"	"1.042E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.1071"	"0.0000"	"1"	"1"	"1"	"688.72906"	"2064.17264"	"2064.15384"	"9.11"	"0.00627"	"12/156"	"12"	"156"	"475522.053894043"	"HCD"	"MS2"	"12.79577"	"20.5"	"100.000"	"85.3742"	"29696"	"29696"	"29669"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"21.7"	""	"22.1"	""	"31.0"	""	"48.2"	"44.0"	""	"992"	"56"	"36.000"	"29.000"	"0.0001225975175928"	""	"9.9E-05"	"0.0007986"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.1389"	"0.0000"	"1"	"1"	"1"	"688.72955"	"2064.17411"	"2064.15384"	"9.82"	"0.00676"	"12/156"	"12"	"156"	"618522.888122559"	"HCD"	"MS2"	"12.99379"	"22.4"	"100.000"	"85.7987"	"29837"	"29837"	"29822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"22.0"	""	"28.9"	""	"34.9"	""	"43.5"	"52.6"	""	"974"	"36"	"36.000"	"29.000"	"0.0112080216507794"	""	"0.0001991"	"0.002079"	"0.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.0638"	"0.0000"	"1"	"1"	"1"	"688.72980"	"2064.17484"	"2064.15384"	"10.18"	"0.00700"	"13/156"	"13"	"156"	"871356.994140625"	"HCD"	"MS2"	"7.644009"	"31.2"	"100.000"	"85.6923"	"29823"	"29823"	"29802"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.7"	""	"29.7"	""	"36.1"	""	"46.0"	""	"69.3"	"71.8"	""	"976"	"47"	"36.000"	"29.000"	"0.000904523432226427"	"26"	"9.9E-05"	"0.00102"	"0.446"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIQEQHPEEELIKTK"	"[K].lIQEQHPEEELIKTK.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"P16086"	"Spectrin alpha chain, non-erythrocytic 1 OS=Rattus norvegicus OX=10116 GN=Sptan1 PE=1 SV=2"	"1"	"3"	"3"	"0.1224"	"0.0000"	"1"	"1"	"1"	"688.73004"	"2064.17557"	"2064.15384"	"10.53"	"0.00725"	"13/156"	"13"	"156"	"729570.337219238"	"HCD"	"MS2"	"9.985164"	"30.4"	"100.000"	"85.4832"	"29710"	"29710"	"29689"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.9"	""	"35.1"	""	"26.2"	""	"53.6"	""	"68.8"	"69.9"	""	"967"	"49"	"36.000"	"29.000"	"0.000583977989274129"	""	"0.0001686"	"0.001454"	"0.414"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.03503"	"2065.09055"	"2065.09494"	"-2.13"	"-0.00146"	"12/148"	"12"	"148"	"684612.342712402"	"HCD"	"MS2"	"60.00296"	"28.3"	"100.000"	"77.3151"	"26433"	"26433"	"26417"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.0"	""	"33.6"	""	"38.1"	""	"41.6"	"0.6"	"49.7"	"60.0"	""	"1327"	"14"	"38.000"	"31.000"	"2.38144703636961"	"13"	"0"	"0.0001264"	"0.633"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.2692"	"0.0000"	"1"	"1"	"1"	"689.03522"	"2065.09110"	"2065.09494"	"-1.86"	"-0.00128"	"14/148"	"14"	"148"	"441008.643005371"	"HCD"	"MS2"	"47.92233"	"16.8"	"100.000"	"78.2986"	"26828"	"26828"	"26807"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.0"	""	"22.8"	""	"22.9"	""	"19.7"	""	"39.0"	"33.2"	""	"1315"	"26"	"38.000"	"31.000"	"0.16439770753154"	""	"0"	"1.602E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"689.03546"	"2065.09183"	"2065.09494"	"-1.51"	"-0.00104"	"11/148"	"11"	"148"	"622352.509643555"	"HCD"	"MS2"	"42.90018"	"28.7"	"100.000"	"72.3681"	"24398"	"24398"	"24368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"34.4"	""	"33.1"	""	"49.9"	""	"55.2"	"58.1"	""	"1334"	"11"	"38.000"	"31.000"	"5.5863203117863"	"14"	"0.0001686"	"0.00173"	"0.399"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5769"	"0.0000"	"1"	"1"	"1"	"689.03564"	"2065.09238"	"2065.09494"	"-1.24"	"-0.00085"	"13/148"	"13"	"148"	"294354.942443848"	"HCD"	"MS2"	"20.20105"	"11.1"	"100.000"	"80.7043"	"27808"	"27808"	"27779"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.4"	""	"15.4"	""	"15.4"	""	"15.7"	""	"22.8"	"23.0"	""	"1328"	"26"	"38.000"	"31.000"	"0.170281740024777"	"25"	"0"	"7.778E-06"	"0.882"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8462"	"0.0000"	"1"	"1"	"1"	"689.03589"	"2065.09311"	"2065.09494"	"-0.89"	"-0.00061"	"16/148"	"16"	"148"	"335672.961791992"	"HCD"	"MS2"	"0"	"13.0"	"100.000"	"80.0138"	"27500"	"27500"	"27478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"22.7"	""	"12.3"	""	"21.0"	""	"23.5"	"25.5"	""	"1338"	"39"	"38.000"	"31.000"	"0.00804314906759049"	"21"	"0"	"4.489E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8095"	"0.0000"	"1"	"1"	"1"	"689.03589"	"2065.09311"	"2065.09494"	"-0.89"	"-0.00061"	"12/148"	"12"	"148"	"329099.265075684"	"HCD"	"MS2"	"7.417417"	"14.8"	"100.000"	"72.2253"	"24370"	"24370"	"24342"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.6"	""	"16.0"	""	"24.3"	""	"22.5"	""	"29.6"	"31.3"	""	"1338"	"21"	"38.000"	"31.000"	"0.531405589030544"	"18"	"0"	"0.0002687"	"0.565"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"689.03595"	"2065.09330"	"2065.09494"	"-0.80"	"-0.00055"	"14/148"	"14"	"148"	"324556.277832031"	"HCD"	"MS2"	"19.21045"	"8.8"	"100.000"	"78.6351"	"26939"	"26939"	"26913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"9.3"	""	"9.3"	""	"15.3"	""	"15.6"	"15.2"	""	"1334"	"37"	"38.000"	"31.000"	"0.0145588085119928"	"23"	"0"	"2.184E-06"	"0.996"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"689.03595"	"2065.09330"	"2065.09494"	"-0.80"	"-0.00055"	"16/148"	"16"	"148"	"396596.931091309"	"HCD"	"MS2"	"12.86964"	"14.4"	"100.000"	"78.2964"	"26801"	"26801"	"26774"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"17.3"	""	"22.3"	""	"20.2"	""	"24.5"	"30.0"	""	"1334"	"47"	"38.000"	"31.000"	"0.00149322699942508"	"25"	"0"	"3.219E-07"	"1.167"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7941"	"0.0000"	"1"	"1"	"1"	"689.03595"	"2065.09330"	"2065.09494"	"-0.80"	"-0.00055"	"17/148"	"17"	"148"	"1601760.92687988"	"HCD"	"MS2"	"32.44795"	"40.5"	"100.000"	"67.8941"	"22583"	"22583"	"22564"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.0"	""	"47.2"	""	"54.4"	""	"80.4"	""	"79.4"	"77.7"	""	"1334"	"34"	"38.000"	"31.000"	"0.0293174257497029"	"21"	"0"	"9.091E-07"	"1.074"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8519"	"0.0000"	"1"	"1"	"1"	"689.03601"	"2065.09348"	"2065.09494"	"-0.71"	"-0.00049"	"10/148"	"10"	"148"	"305931.805786133"	"HCD"	"MS2"	"8.780224"	"12.3"	"100.000"	"80.4671"	"27684"	"27684"	"27660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.7"	""	"18.1"	""	"15.7"	""	"22.2"	""	"24.8"	"22.6"	""	"1330"	"27"	"38.000"	"31.000"	"0.141847486724247"	"18"	"0"	"9.389E-05"	"0.659"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6500"	"0.0000"	"1"	"1"	"1"	"689.03607"	"2065.09366"	"2065.09494"	"-0.62"	"-0.00043"	"11/148"	"11"	"148"	"414717.972229004"	"HCD"	"MS2"	"13.45678"	"17.2"	"100.000"	"75.6769"	"25742"	"25742"	"25721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.2"	""	"17.8"	""	"22.5"	""	"30.9"	"1.2"	"33.2"	"36.1"	""	"1326"	"20"	"38.000"	"31.000"	"0.617324521435172"	"21"	"0"	"0.0002317"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7368"	"0.0000"	"1"	"1"	"1"	"689.03607"	"2065.09366"	"2065.09494"	"-0.62"	"-0.00043"	"11/148"	"11"	"148"	"527874.945739746"	"HCD"	"MS2"	"29.60065"	"20.3"	"100.000"	"76.8783"	"26262"	"26262"	"26234"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.8"	""	"21.5"	""	"28.4"	""	"34.6"	"3.1"	"39.5"	"43.4"	""	"1326"	"19"	"38.000"	"31.000"	"0.80262656254397"	"18"	"9.9E-05"	"0.0007987"	"0.468"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6579"	"0.0000"	"1"	"1"	"1"	"689.03619"	"2065.09403"	"2065.09494"	"-0.44"	"-0.00030"	"15/148"	"15"	"148"	"413345.451721191"	"HCD"	"MS2"	"51.98489"	"17.5"	"100.000"	"80.0709"	"27551"	"27551"	"27524"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"20.4"	""	"23.6"	""	"25.0"	""	"33.6"	"38.3"	""	"1328"	"38"	"38.000"	"31.000"	"0.00957564593412514"	"28"	"0"	"1.562E-05"	"0.82"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7250"	"0.0000"	"1"	"1"	"1"	"689.03619"	"2065.09403"	"2065.09494"	"-0.44"	"-0.00030"	"16/148"	"16"	"148"	"515702.453430176"	"HCD"	"MS2"	"20.87471"	"18.0"	"100.000"	"75.7428"	"25800"	"25800"	"25777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.0"	""	"23.4"	""	"20.5"	""	"32.0"	""	"41.5"	"34.5"	""	"1328"	"40"	"38.000"	"31.000"	"0.00650381350311376"	"26"	"0"	"3.183E-07"	"1.168"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"689.03619"	"2065.09403"	"2065.09494"	"-0.44"	"-0.00030"	"16/148"	"16"	"148"	"1882817.73138428"	"HCD"	"MS2"	"37.80363"	"68.5"	"100.000"	"69.1244"	"23082"	"23082"	"23062"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.7"	""	"82.1"	""	"93.2"	""	"135.8"	""	"122.4"	"117.7"	""	"1328"	"30"	"38.000"	"31.000"	"0.0647393119444346"	"19"	"0"	"2.348E-07"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"689.03632"	"2065.09439"	"2065.09494"	"-0.26"	"-0.00018"	"18/148"	"18"	"148"	"1297919.487854"	"HCD"	"MS2"	"18.08207"	"23.8"	"100.000"	"68.8250"	"22960"	"22960"	"22942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.0"	""	"27.4"	""	"35.9"	""	"36.9"	""	"47.1"	"49.0"	""	"1334"	"44"	"38.000"	"31.000"	"0.00272349030683905"	"26"	"0"	"1.871E-07"	"1.215"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7609"	"0.0000"	"1"	"1"	"1"	"689.03638"	"2065.09458"	"2065.09494"	"-0.18"	"-0.00012"	"17/148"	"17"	"148"	"339703.371276855"	"HCD"	"MS2"	"8.458171"	"9.2"	"100.000"	"78.9209"	"27082"	"27082"	"27062"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"8.4"	""	"12.9"	""	"14.5"	""	"24.1"	"13.5"	""	"1331"	"46"	"38.000"	"31.000"	"0.00153160952948536"	"26"	"0"	"2.28E-06"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPAENVNQYLTDSK"	"[K].qPAENVNQYLTDSk.[F]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"689.03638"	"2065.09458"	"2065.09660"	"-0.98"	"-0.00068"	"13/148"	"13"	"148"	"455935.501281738"	"HCD"	"MS2"	"16.72813"	"17.0"	"100.000"	"86.5568"	"30171"	"30171"	"30153"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.1"	""	"21.6"	""	"21.7"	""	"24.0"	""	"30.1"	"29.5"	""	"1331"	"38"	"38.000"	"31.000"	"0.010331135551271"	"15"	"0"	"5.915E-05"	"0.701"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7436"	"0.0000"	"1"	"1"	"1"	"689.03638"	"2065.09458"	"2065.09494"	"-0.18"	"-0.00012"	"16/148"	"16"	"148"	"1323622.52111816"	"HCD"	"MS2"	"4.30543"	"27.7"	"100.000"	"68.6165"	"22909"	"22909"	"22890"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.0"	""	"38.5"	""	"38.4"	""	"50.8"	""	"52.0"	"52.8"	""	"1331"	"39"	"38.000"	"31.000"	"0.00833965451923512"	"25"	"0"	"5.767E-07"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5217"	"0.0000"	"1"	"1"	"1"	"689.03656"	"2065.09513"	"2065.09494"	"0.09"	"0.00006"	"10/148"	"10"	"148"	"283001.979797363"	"HCD"	"MS2"	"3.677215"	"10.3"	"100.000"	"81.0691"	"27928"	"27928"	"27907"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.4"	""	"13.5"	""	"14.9"	""	"14.4"	""	"16.6"	"22.6"	""	"1336"	"23"	"38.000"	"31.000"	"0.316793646153844"	"25"	"0"	"0.0001397"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"689.03656"	"2065.09513"	"2065.09494"	"0.09"	"0.00006"	"17/148"	"17"	"148"	"1255061.65588379"	"HCD"	"MS2"	"9.567314"	"22.0"	"100.000"	"68.2638"	"22765"	"22765"	"22746"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"28.9"	""	"31.1"	""	"30.4"	""	"36.8"	""	"42.2"	"40.3"	""	"1336"	"49"	"38.000"	"31.000"	"0.000888743551209366"	"29"	"0"	"2.12E-08"	"1.41"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7111"	"0.0000"	"1"	"1"	"1"	"689.03662"	"2065.09531"	"2065.09494"	"0.18"	"0.00012"	"16/148"	"16"	"148"	"1172074.57073975"	"HCD"	"MS2"	"0"	"20.3"	"100.000"	"68.9324"	"23038"	"23038"	"23016"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"23.4"	""	"23.8"	""	"36.7"	""	"50.1"	"34.8"	""	"1336"	"45"	"38.000"	"31.000"	"0.0019942355894372"	"28"	"0"	"1.453E-07"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.8043"	"0.0000"	"1"	"1"	"1"	"689.03674"	"2065.09568"	"2065.09494"	"0.36"	"0.00025"	"17/148"	"17"	"148"	"1144390.09307861"	"HCD"	"MS2"	"6.130975"	"19.5"	"100.000"	"68.1913"	"22703"	"22703"	"22684"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.8"	""	"21.6"	""	"27.5"	""	"35.7"	"2.2"	"35.5"	"35.1"	""	"1335"	"46"	"38.000"	"31.000"	"0.00184693354831219"	"24"	"0"	"1.3E-06"	"1.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6786"	"0.0000"	"1"	"1"	"1"	"689.03680"	"2065.09586"	"2065.09494"	"0.44"	"0.00031"	"13/148"	"13"	"148"	"268681.048278809"	"HCD"	"MS2"	"9.445389"	"10.1"	"100.000"	"80.7714"	"27808"	"27808"	"27782"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"13.0"	""	"12.6"	""	"15.9"	""	"19.2"	"21.9"	""	"1336"	"28"	"38.000"	"31.000"	"0.0974487925863934"	"23"	"9.9E-05"	"0.0004436"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"689.03680"	"2065.09586"	"2065.09494"	"0.44"	"0.00031"	"14/148"	"14"	"148"	"318108.403259277"	"HCD"	"MS2"	"14.37081"	"12.1"	"100.000"	"79.2599"	"27193"	"27193"	"27173"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.7"	""	"17.7"	""	"15.8"	""	"21.4"	""	"22.0"	"27.1"	""	"1336"	"28"	"38.000"	"31.000"	"0.109591396849729"	"22"	"9.9E-05"	"0.000674"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7059"	"0.0000"	"1"	"1"	"1"	"689.03680"	"2065.09586"	"2065.09494"	"0.44"	"0.00031"	"17/148"	"17"	"148"	"1386017.74078369"	"HCD"	"MS2"	"44.07615"	"34.5"	"100.000"	"67.9737"	"22647"	"22647"	"22626"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"45.7"	""	"44.1"	""	"45.4"	""	"61.3"	""	"66.8"	"66.1"	""	"1336"	"34"	"38.000"	"31.000"	"0.0242536140586428"	"25"	"0"	"3.491E-07"	"1.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7826"	"0.0000"	"1"	"1"	"1"	"689.03680"	"2065.09586"	"2065.09494"	"0.44"	"0.00031"	"16/148"	"16"	"148"	"1321657.3895874"	"HCD"	"MS2"	"2.587387"	"24.2"	"100.000"	"68.5073"	"22832"	"22832"	"22812"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.6"	""	"30.1"	""	"34.0"	""	"47.0"	""	"45.9"	"45.7"	""	"1336"	"46"	"38.000"	"31.000"	"0.00174894624949028"	"25"	"0"	"1.528E-07"	"1.233"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6818"	"0.0000"	"1"	"1"	"1"	"689.03687"	"2065.09604"	"2065.09494"	"0.53"	"0.00037"	"16/148"	"16"	"148"	"287002.553405762"	"HCD"	"MS2"	"17.00275"	"9.1"	"100.000"	"81.0318"	"27941"	"27941"	"27916"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"11.4"	""	"14.8"	""	"13.6"	""	"17.0"	"15.9"	""	"1338"	"44"	"38.000"	"31.000"	"0.00294731203685884"	"29"	"0"	"3.325E-06"	"0.958"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.6190"	"0.0000"	"1"	"1"	"1"	"689.03711"	"2065.09677"	"2065.09494"	"0.89"	"0.00061"	"6/148"	"6"	"148"	"333031.561889648"	"HCD"	"MS2"	"7.232764"	"9.7"	"100.000"	"78.9419"	"27064"	"27064"	"27040"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"9.3"	""	"15.1"	""	"18.1"	""	"19.4"	"19.8"	""	"1335"	"21"	"38.000"	"31.000"	"0.5388293826911"	"22"	"0"	"5.395E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5600"	"0.0000"	"1"	"1"	"1"	"689.03723"	"2065.09714"	"2065.09494"	"1.07"	"0.00073"	"12/148"	"12"	"148"	"380151.738098145"	"HCD"	"MS2"	"6.835286"	"15.6"	"100.000"	"79.5616"	"27343"	"27343"	"27318"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"15.7"	""	"15.6"	""	"33.2"	""	"28.3"	"35.9"	""	"1335"	"25"	"38.000"	"31.000"	"0.23520755642086"	"25"	"0"	"0.0001285"	"0.631"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.5926"	"0.0000"	"1"	"1"	"1"	"689.03729"	"2065.09732"	"2065.09494"	"1.15"	"0.00079"	"12/148"	"12"	"148"	"338663.347229004"	"HCD"	"MS2"	"11.22268"	"9.4"	"100.000"	"79.2273"	"27207"	"27207"	"27180"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.2"	""	"10.7"	""	"13.2"	""	"15.8"	""	"20.1"	"16.7"	""	"1321"	"27"	"38.000"	"31.000"	"0.138316127708952"	"25"	"0"	"5.403E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.4286"	"0.0000"	"1"	"1"	"1"	"689.03802"	"2065.09952"	"2065.09494"	"2.22"	"0.00153"	"11/148"	"11"	"148"	"369779.180725098"	"HCD"	"MS2"	"34.42229"	"20.3"	"100.000"	"82.0423"	"28323"	"28323"	"28295"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.4"	""	"24.8"	""	"26.6"	""	"35.6"	""	"39.2"	"36.7"	""	"1323"	"21"	"38.000"	"31.000"	"0.471552279428693"	"26"	"9.9E-05"	"0.0004948"	"0.511"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AASDIAMTELPPTHPIR"	"[K].aASDIAmTELPPTHPIR.[L]"	"N-Term(TMT6plex); M7(Oxidation)"	"1"	"1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"P62260"	"14-3-3 protein epsilon OS=Rattus norvegicus OX=10116 GN=Ywhae PE=1 SV=1"	"0"	"3"	"3"	"0.7931"	"0.0000"	"1"	"1"	"1"	"689.03943"	"2065.10373"	"2065.09494"	"4.26"	"0.00293"	"14/148"	"14"	"148"	"365503.482421875"	"HCD"	"MS2"	"68.76298"	"19.5"	"100.000"	"82.1112"	"28379"	"28379"	"28350"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.3"	""	"22.0"	""	"25.2"	""	"31.0"	""	"40.8"	"39.7"	""	"1326"	"29"	"38.000"	"31.000"	"0.0862012430236072"	"21"	"0"	"0.0001083"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGPVPEFSGDTVEK"	"[K].tFGPVPEFSGDTVEk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"0.7500"	"0.0000"	"1"	"1"	"1"	"690.03870"	"2068.10154"	"2068.10029"	"0.60"	"0.00041"	"9/138"	"9"	"138"	"193636.756225586"	"HCD"	"MS2"	"20.7776"	"6.3"	"100.000"	"109.0650"	"39164"	"39164"	"39154"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.2"	""	"4.4"	""	"10.5"	""	"11.6"	""	"11.4"	"10.7"	""	"1229"	"12"	"37.000"	"30.000"	"3.74560423354084"	"16"	"0.0001991"	"0.002886"	"0.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFGPVPEFSGDTVEK"	"[K].tFGPVPEFSGDTVEk.[V]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"Q811X6"	"Lambda-crystallin homolog OS=Rattus norvegicus OX=10116 GN=Cryl1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"690.03931"	"2068.10337"	"2068.10029"	"1.49"	"0.00102"	"9/138"	"9"	"138"	"201297.167602539"	"HCD"	"MS2"	"61.98252"	"6.0"	"100.000"	"108.7448"	"39029"	"39029"	"39018"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.4"	""	"6.7"	""	"8.3"	""	"12.7"	""	"9.3"	"13.2"	""	"1231"	"19"	"37.000"	"30.000"	"0.776654847540558"	"14"	"9.9E-05"	"0.0009275"	"0.455"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DESLKVDEHLAK"	"[R].dESLkVDEHLAk.[K]"	"N-Term(TMT6plex); K5(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"1"	"4"	"4"	""	"0.0000"	"1"	"1"	"1"	"518.55536"	"2071.19961"	"2071.20023"	"-0.30"	"-0.00016"	"6/116"	"6"	"116"	"3733736.29217529"	"HCD"	"MS2"	"18.72507"	"108.7"	"100.000"	"57.9001"	"18561"	"18561"	"18542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"136.3"	""	"94.6"	""	"109.4"	""	"193.2"	"1.8"	"256.1"	"242.9"	""	"845"	"0"	"36.000"	"29.000"	"40.4414495122072"	"13"	"0.007989"	"0.1012"	"0.027"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETNYDHWEPVPK"	"[R].vETNYDHWEPVPk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"691.36633"	"2072.08445"	"2072.08531"	"-0.42"	"-0.00029"	"12/128"	"12"	"128"	"862223.967895508"	"HCD"	"MS2"	"28.27258"	"25.5"	"100.000"	"84.8993"	"29502"	"29502"	"29485"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"41.9"	""	"34.1"	""	"33.3"	""	"47.7"	""	"40.1"	"45.7"	""	"1186"	"25"	"37.000"	"30.000"	"0.20514205105089"	"16"	"0"	"5.254E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETNYDHWEPVPK"	"[R].vETNYDHWEPVPk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"0.9231"	"0.0000"	"1"	"1"	"1"	"691.36633"	"2072.08445"	"2072.08531"	"-0.42"	"-0.00029"	"12/128"	"12"	"128"	"1044228.19799805"	"HCD"	"MS2"	"29.04964"	"29.6"	"100.000"	"84.9116"	"29478"	"29478"	"29456"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.5"	""	"38.9"	""	"33.9"	""	"49.9"	"0.3"	"46.3"	"65.4"	""	"1186"	"26"	"37.000"	"30.000"	"0.152424469918194"	"16"	"0"	"5.409E-05"	"0.709"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VETNYDHWEPVPK"	"[R].vETNYDHWEPVPk.[R]"	"N-Term(TMT6plex); K13(TMT6plex)"	"1"	"1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"Q5KTC7"	"N-acylethanolamine-hydrolyzing acid amidase OS=Rattus norvegicus OX=10116 GN=Naaa PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"691.36749"	"2072.08792"	"2072.08531"	"1.26"	"0.00087"	"8/128"	"8"	"128"	"206389.921203613"	"HCD"	"MS2"	"21.4362"	"9.9"	"100.000"	"85.2958"	"29664"	"29664"	"29637"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.1"	""	"12.9"	""	"10.9"	""	"12.5"	""	"22.1"	"19.2"	""	"1203"	"10"	"37.000"	"30.000"	"5.600613870939"	"13"	"0.0001686"	"0.001501"	"0.412"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPVEGLSGNPADLEK"	"[K].tSPVEGLSGNPADLEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"3"	"3"	"0.8049"	"0.0000"	"1"	"1"	"1"	"691.38037"	"2072.12656"	"2072.12757"	"-0.49"	"-0.00034"	"15/160"	"15"	"160"	"733731.514648438"	"HCD"	"MS2"	"38.25706"	"25.3"	"100.000"	"95.7612"	"33881"	"33881"	"33864"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"30.8"	""	"33.4"	""	"45.7"	""	"54.2"	"47.8"	""	"1257"	"41"	"37.000"	"30.000"	"0.0049465827882337"	"24"	"0"	"2.346E-07"	"1.195"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPVEGLSGNPADLEK"	"[K].tSPVEGLSGNPADLEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"3"	"3"	"0.4000"	"0.0000"	"1"	"1"	"1"	"691.38055"	"2072.12711"	"2072.12757"	"-0.22"	"-0.00015"	"9/160"	"9"	"160"	"122212.921203613"	"HCD"	"MS2"	"8.331601"	"7.9"	"100.000"	"96.0913"	"34015"	"34015"	"33990"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"10.2"	""	"9.9"	""	"13.3"	""	"17.1"	"16.5"	""	"1254"	"15"	"37.000"	"30.000"	"1.78758845372495"	"22"	"0.001488"	"0.01229"	"0.223"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSPVEGLSGNPADLEK"	"[K].tSPVEGLSGNPADLEk.[R]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"Q64542"	"Plasma membrane calcium-transporting ATPase 4 OS=Rattus norvegicus OX=10116 GN=Atp2b4 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"691.38062"	"2072.12729"	"2072.12757"	"-0.13"	"-0.00009"	"16/160"	"16"	"160"	"710142.130981445"	"HCD"	"MS2"	"15.24454"	"23.9"	"100.000"	"95.8492"	"33884"	"33884"	"33866"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"27.4"	""	"28.5"	""	"42.3"	""	"49.9"	"55.0"	""	"1259"	"51"	"37.000"	"31.000"	"0.000472058404774781"	"28"	"0"	"1.765E-07"	"1.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQQVESSLQPETLK"	"[K].mQQVESSLQPETLk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"2"	"3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.6957"	"0.0000"	"1"	"1"	"1"	"692.71777"	"2076.13877"	"2076.14111"	"-1.13"	"-0.00078"	"13/142"	"13"	"142"	"502315.966064453"	"HCD"	"MS2"	"12.22417"	"18.0"	"100.000"	"99.6311"	"35442"	"35442"	"35428"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.4"	""	"25.4"	""	"26.7"	""	"24.9"	""	"34.7"	"35.3"	""	"1188"	"46"	"37.000"	"30.000"	"0.0014216295593048"	"29"	"0"	"1.023E-05"	"0.858"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQQVESSLQPETLK"	"[K].mQQVESSLQPETLk.[K]"	"N-Term(TMT6plex); K14(TMT6plex)"	"2"	"3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"0.5957"	"0.0000"	"1"	"1"	"1"	"692.71857"	"2076.14115"	"2076.14111"	"0.02"	"0.00001"	"13/142"	"13"	"142"	"506599.125915527"	"HCD"	"MS2"	"8.11715"	"16.2"	"100.000"	"99.6025"	"35402"	"35402"	"35383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.3"	""	"23.7"	""	"20.5"	""	"23.7"	""	"38.1"	"31.6"	""	"1183"	"47"	"37.000"	"30.000"	"0.00107387751453031"	""	"0"	"1.887E-05"	"0.803"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDISASDDEMARPK"	"[K].aLDISASDDEMARPk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.03790"	"2077.09916"	"2077.09998"	"-0.39"	"-0.00027"	"15/130"	"15"	"130"	"558871.733947754"	"HCD"	"MS2"	"25.78241"	"31.5"	"100.000"	"74.8140"	"25422"	"25422"	"25404"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"49.4"	""	"39.5"	""	"42.4"	""	"44.4"	""	"61.0"	"64.1"	""	"1283"	"21"	"38.000"	"31.000"	"0.565192852034641"	"14"	"0"	"5.539E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAYPDQKPGTSGLR"	"[K].tQAYPDQkPGTSGLR.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"693.05328"	"2077.14530"	"2077.14422"	"0.52"	"0.00036"	"13/160"	"13"	"160"	"1018166.79321289"	"HCD"	"MS2"	"59.34739"	"63.0"	"100.000"	"44.3455"	"13062"	"13062"	"13045"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"123.6"	""	"89.8"	""	"94.3"	""	"76.2"	""	"96.4"	"114.9"	""	"1204"	"20"	"37.000"	"30.000"	"0.586943761905867"	"18"	"0"	"8.927E-05"	"0.664"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TQAYPDQKPGTSGLR"	"[K].tQAYPDQkPGTSGLR.[K]"	"N-Term(TMT6plex); K8(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"693.05524"	"2077.15116"	"2077.14422"	"3.34"	"0.00231"	"7/160"	"7"	"160"	"957662.376525879"	"HCD"	"MS2"	"17.7498"	"66.5"	"100.000"	"44.6226"	"13139"	"13139"	"13121"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"123.8"	""	"93.6"	""	"97.2"	""	"88.2"	""	"98.8"	"127.2"	""	"1186"	"6"	"37.000"	"30.000"	"13.86930482525"	"13"	"0.0001686"	"0.001511"	"0.411"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPSPDEPMTNLELK"	"[K].rPSPDEPMTNLELk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"695.71802"	"2085.13950"	"2085.14145"	"-0.93"	"-0.00065"	"10/148"	"10"	"148"	"390490.609069824"	"HCD"	"MS2"	"0"	"22.7"	"100.000"	"76.6922"	"26186"	"26186"	"26168"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.1"	""	"23.0"	""	"34.4"	""	"35.8"	""	"45.8"	"46.1"	""	"1180"	"25"	"37.000"	"30.000"	"0.178177151503719"	"15"	"0"	"0.0002908"	"0.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RPSPDEPMTNLELK"	"[K].rPSPDEPMTNLELk.[I]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"D4A4T9"	"Cysteine and histidine-rich domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Chordc1 PE=3 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"695.71881"	"2085.14188"	"2085.14145"	"0.21"	"0.00014"	"9/148"	"9"	"148"	"382244.924133301"	"HCD"	"MS2"	"5.026521"	"21.3"	"100.000"	"76.5854"	"26111"	"26111"	"26088"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.8"	""	"29.3"	""	"31.3"	""	"32.6"	""	"38.5"	"36.7"	""	"1184"	"23"	"37.000"	"30.000"	"0.314283590984745"	"14"	"0.0001991"	"0.002698"	"0.359"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSEGGAATGAGLDSLHK"	"[K].aSSEGGAATGAGLDSLHk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.9118"	"0.0000"	"1"	"1"	"1"	"696.37555"	"2087.11209"	"2087.11332"	"-0.59"	"-0.00041"	"16/162"	"16"	"162"	"1798656.05670166"	"HCD"	"MS2"	"3.623586"	"64.8"	"100.000"	"55.1484"	"17448"	"17448"	"17426"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.3"	""	"67.1"	""	"72.4"	""	"115.5"	""	"129.9"	"131.7"	""	"1275"	"102"	"38.000"	"31.000"	"4.05957144578798E-09"	"27"	"0"	"7.637835E-13"	"2.324004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSEGGAATGAGLDSLHK"	"[K].aSSEGGAATGAGLDSLHk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.9385"	"0.0000"	"1"	"1"	"1"	"696.37598"	"2087.11338"	"2087.11332"	"0.03"	"0.00002"	"19/162"	"19"	"162"	"1017518.71600342"	"HCD"	"MS2"	"53.97387"	"48.1"	"100.000"	"55.9409"	"17736"	"17736"	"17721"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.0"	""	"55.6"	""	"53.9"	""	"96.3"	"1.9"	"101.2"	"94.4"	""	"1279"	"65"	"38.000"	"31.000"	"1.98536585660808E-05"	"21"	"0"	"7.411E-11"	"1.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASSEGGAATGAGLDSLHK"	"[K].aSSEGGAATGAGLDSLHk.[N]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.9571"	"0.0000"	"1"	"1"	"1"	"696.37646"	"2087.11484"	"2087.11332"	"0.73"	"0.00051"	"13/162"	"13"	"162"	"2666387.19128418"	"HCD"	"MS2"	"13.35264"	"103.4"	"100.000"	"55.5648"	"17584"	"17584"	"17560"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"131.6"	""	"121.0"	""	"106.4"	""	"204.8"	""	"214.2"	"211.9"	""	"1273"	"70"	"38.000"	"31.000"	"5.94016362457285E-06"	"20"	"0"	"1.32E-12"	"2.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLPNAMNAAEITDK"	"[K].qDLPNAMNAAEITDk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"3"	"3"	"0.8140"	"0.0000"	"1"	"1"	"1"	"697.03748"	"2089.09787"	"2089.09998"	"-1.01"	"-0.00070"	"13/164"	"13"	"164"	"844599.054077148"	"HCD"	"MS2"	"3.983118"	"23.9"	"100.000"	"99.3141"	"35285"	"35285"	"35270"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"52.6"	""	"27.6"	""	"26.4"	""	"34.2"	""	"42.3"	"45.1"	""	"1341"	"43"	"38.000"	"31.000"	"0.00312175475707144"	"23"	"0"	"4.495E-05"	"0.725"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QDLPNAMNAAEITDK"	"[K].qDLPNAMNAAEITDk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"3"	"P61206"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2"	"P61206; P84079; P84082"	"ADP-ribosylation factor 3 OS=Rattus norvegicus OX=10116 GN=Arf3 PE=2 SV=2; ADP-ribosylation factor 1 OS=Rattus norvegicus OX=10116 GN=Arf1 PE=1 SV=2; ADP-ribosylation factor 2 OS=Rattus norvegicus OX=10116 GN=Arf2 PE=2 SV=1"	"0"	"3"	"3"	"0.8679"	"0.0000"	"1"	"1"	"1"	"697.03821"	"2089.10007"	"2089.09998"	"0.05"	"0.00003"	"16/164"	"16"	"164"	"1010148.57391357"	"HCD"	"MS2"	"13.05472"	"27.1"	"100.000"	"99.4972"	"35388"	"35388"	"35369"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.7"	""	"35.4"	""	"29.8"	""	"38.6"	""	"54.8"	"48.9"	""	"1345"	"53"	"38.000"	"31.000"	"0.000337825391453805"	"23"	"0"	"1.064E-07"	"1.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAVEAAHQAAPGWGAQSPR"	"[R].gAVEAAHQAAPGWGAQSPR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"Q3T1L0"	"Aldehyde dehydrogenase family 16 member A1 OS=Rattus norvegicus OX=10116 GN=Aldh16a1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"697.35992"	"2090.06522"	"2090.07290"	"-3.67"	"-0.00256"	"10/192"	"10"	"192"	"279102.244506836"	"HCD"	"MS2"	"59.01755"	"10.4"	"100.000"	"46.9979"	"14098"	"14098"	"14074"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"9.8"	""	"15.6"	""	"15.5"	""	"23.6"	"20.4"	""	"1155"	"26"	"37.000"	"30.000"	"0.142413771725283"	"14"	"0"	"5.495E-05"	"0.707"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSPAGAAVGVPLSEDEAR"	"[K].hVSPAGAAVGVPLSEDEAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.7838"	"0.0000"	"1"	"1"	"1"	"697.70544"	"2091.10178"	"2091.10320"	"-0.68"	"-0.00047"	"20/172"	"20"	"172"	"2346889.4362793"	"HCD"	"MS2"	"23.63208"	"52.0"	"100.000"	"60.0779"	"19413"	"19413"	"19393"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.8"	""	"48.2"	""	"64.0"	""	"122.9"	"1.1"	"99.2"	"104.4"	""	"1346"	"37"	"38.000"	"31.000"	"0.014421653745538"	"23"	"0"	"8.95E-08"	"1.281"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HVSPAGAAVGVPLSEDEAR"	"[K].hVSPAGAAVGVPLSEDEAR.[V]"	"N-Term(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.7692"	"0.0000"	"1"	"1"	"1"	"697.70551"	"2091.10196"	"2091.10320"	"-0.59"	"-0.00041"	"19/172"	"19"	"172"	"2340341.35491943"	"HCD"	"MS2"	"20.88133"	"53.9"	"100.000"	"59.9718"	"19403"	"19403"	"19382"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.8"	""	"64.4"	""	"70.6"	""	"136.1"	""	"91.0"	"88.4"	""	"1361"	"39"	"38.000"	"31.000"	"0.0091164998579335"	"23"	"0"	"1.261E-07"	"1.25"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQQVESSLQPETLK"	"[K].mQQVESSLQPETLk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K14(TMT6plex)"	"2"	"3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.04919"	"2092.13303"	"2092.13603"	"-1.43"	"-0.00100"	"10/142"	"10"	"142"	"472731.134094238"	"HCD"	"MS2"	"23.26653"	"20.8"	"100.000"	"77.9323"	"26680"	"26680"	"26654"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"28.5"	""	"30.9"	""	"32.4"	""	"36.0"	"40.8"	""	"1392"	"21"	"38.000"	"31.000"	"0.500736488690574"	"14"	"0"	"0.0003712"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MQQVESSLQPETLK"	"[K].mQQVESSLQPETLk.[K]"	"N-Term(TMT6plex); M1(Oxidation); K14(TMT6plex)"	"2"	"3"	"P05544; P05545"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3;Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3"	"P05544; P05545; P09005"	"Serine protease inhibitor A3L OS=Rattus norvegicus OX=10116 GN=Serpina3l PE=1 SV=3; Serine protease inhibitor A3K OS=Rattus norvegicus OX=10116 GN=Serpina3k PE=1 SV=3; Serine protease inhibitor 2.1 (Fragment) OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.04980"	"2092.13486"	"2092.13603"	"-0.56"	"-0.00039"	"10/142"	"10"	"142"	"511751.869140625"	"HCD"	"MS2"	"14.77841"	"22.3"	"100.000"	"77.8172"	"26606"	"26606"	"26581"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.3"	""	"23.1"	""	"30.8"	""	"34.6"	""	"47.0"	"46.7"	""	"1379"	"24"	"38.000"	"31.000"	"0.281536216876391"	"14"	"0"	"2.525E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ALDISASDDEMARPK"	"[K].aLDISASDDEmARPk.[K]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"P13676"	"Acylamino-acid-releasing enzyme OS=Rattus norvegicus OX=10116 GN=Apeh PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"698.37091"	"2093.09818"	"2093.09489"	"1.57"	"0.00110"	"9/130"	"9"	"130"	"232240.689208984"	"HCD"	"MS2"	"0"	"16.2"	"100.000"	"57.2744"	"18306"	"18306"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.7"	""	"16.9"	""	"21.6"	""	"36.0"	""	"32.9"	"29.3"	""	"1325"	"9"	"38.000"	"31.000"	"8.34038085313635"	"15"	"0.0005161"	"0.006937"	"0.275"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDQYQGADAVGLEEK"	"[R].iDQYQGADAVGLEEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8226"	"0.0000"	"1"	"1"	"1"	"698.70856"	"2094.11112"	"2094.11192"	"-0.38"	"-0.00027"	"18/160"	"18"	"160"	"568477.903198242"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"96.2552"	"34081"	"34081"	"34057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.7"	""	"27.3"	""	"25.0"	""	"28.0"	""	"35.8"	"29.9"	""	"1266"	"62"	"38.000"	"31.000"	"3.98477413748607E-05"	"27"	"0"	"1.011E-07"	"1.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDQYQGADAVGLEEK"	"[R].iDQYQGADAVGLEEk.[I]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"Q920J4"	"Thioredoxin-like protein 1 OS=Rattus norvegicus OX=10116 GN=Txnl1 PE=1 SV=3"	"0"	"3"	"3"	"0.8088"	"0.0000"	"1"	"1"	"1"	"698.70874"	"2094.11167"	"2094.11192"	"-0.12"	"-0.00008"	"13/160"	"13"	"160"	"425733.740356445"	"HCD"	"MS2"	"5.19986"	"17.5"	"100.000"	"96.1540"	"34008"	"34008"	"33990"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.1"	""	"27.0"	""	"25.7"	""	"27.7"	""	"29.7"	"26.8"	""	"1268"	"68"	"38.000"	"31.000"	"9.33446126542345E-06"	"30"	"0"	"1.741E-07"	"1.222"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HNEETGDNVGPLIIK"	"[K].hNEETGDNVGPLIIk.[K]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"B0K020"	"CDGSH iron-sulfur domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Cisd1 PE=3 SV=1"	"B0K020"	"CDGSH iron-sulfur domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Cisd1 PE=3 SV=1"	"0"	"3"	"3"	"0.8966"	"0.0000"	"1"	"1"	"1"	"698.72491"	"2094.16019"	"2094.15954"	"0.31"	"0.00022"	"15/146"	"15"	"146"	"501548.746826172"	"HCD"	"MS2"	"12.42608"	"23.5"	"100.000"	"73.3635"	"24803"	"24803"	"24778"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"33.3"	""	"33.6"	""	"41.8"	""	"40.3"	"44.6"	""	"1079"	"29"	"37.000"	"30.000"	"0.0671415633050661"	"17"	"0"	"3.055E-05"	"0.76"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAGVVPVVPGEVEVVK"	"[R].gTAGVVPVVPGEVEVVk.[G]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"698.75696"	"2094.25632"	"2094.25746"	"-0.55"	"-0.00038"	"9/152"	"9"	"152"	"203084.741760254"	"HCD"	"MS2"	"18.45956"	"7.5"	"100.000"	"110.2907"	"39638"	"39638"	"39613"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"8.0"	""	"11.0"	""	"6.0"	""	"9.9"	"16.0"	""	"429"	"24"	"33.000"	"26.000"	"0.0778802427481867"	"14"	"9.9E-05"	"0.0007312"	"0.476"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTAGVVPVVPGEVEVVK"	"[R].gTAGVVPVVPGEVEVVk.[G]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"P21708"	"Mitogen-activated protein kinase 3 OS=Rattus norvegicus OX=10116 GN=Mapk3 PE=1 SV=5"	"0"	"3"	"3"	"0.9778"	"0.0000"	"1"	"1"	"1"	"698.75781"	"2094.25888"	"2094.25746"	"0.68"	"0.00047"	"15/152"	"15"	"152"	"421013.290527344"	"HCD"	"MS2"	"9.653092"	"9.7"	"100.000"	"110.0805"	"39539"	"39539"	"39519"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.9"	""	"9.7"	""	"15.0"	""	"18.8"	""	"14.4"	"19.4"	""	"396"	"45"	"32.000"	"25.000"	"0.000646643907701225"	"16"	"0"	"4.01E-07"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1048.04102"	"2095.07475"	"2095.07818"	"-1.63"	"-0.00171"	"9/152"	"9"	"152"	"106915.475219727"	"HCD"	"MS2"	"0"	"6.2"	"100.000"	"95.2632"	"33647"	"33647"	"33623"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.5"	""	"12.3"	""	"8.7"	""	"3.7"	""	"10.6"	"12.9"	""	"1168"	"28"	"37.000"	"30.000"	"0.0984946966827025"	"14"	"0.0001991"	"0.004584"	"0.312"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9710"	"0.0000"	"1"	"1"	"1"	"699.03070"	"2095.07755"	"2095.07818"	"-0.30"	"-0.00021"	"16/152"	"16"	"152"	"1288926.57537842"	"HCD"	"MS2"	"3.175927"	"32.2"	"100.000"	"95.5493"	"33795"	"33795"	"33777"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"48.9"	""	"55.6"	""	"51.8"	""	"30.4"	""	"57.9"	"62.1"	""	"1202"	"69"	"37.000"	"30.000"	"8.03293905444413E-06"	"19"	"0"	"6.291E-07"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1048.04285"	"2095.07842"	"2095.07818"	"0.11"	"0.00012"	"4/152"	"4"	"152"	"48640.8056640625"	"HCD"	"MS2"	"0"	"3.0"	"100.000"	"95.5699"	"33771"	"33771"	"33750"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.9"	""	"6.5"	""	"4.0"	""	""	""	"5.6"	"4.6"	""	"1198"	"5"	"37.000"	"30.000"	"19.9722421245178"	"13"	"0.00981"	"0.1314"	"0.001"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9831"	"0.0000"	"1"	"1"	"1"	"699.03101"	"2095.07846"	"2095.07818"	"0.14"	"0.00010"	"15/152"	"15"	"152"	"820321.503051758"	"HCD"	"MS2"	"0"	"24.0"	"100.000"	"95.1850"	"33615"	"33615"	"33592"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"47.1"	""	"38.3"	""	"37.7"	""	"21.5"	""	"46.5"	"37.2"	""	"1196"	"59"	"37.000"	"30.000"	"7.15650837721731E-05"	"17"	"0"	"4.73E-07"	"1.132"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9839"	"0.0000"	"1"	"1"	"1"	"699.03125"	"2095.07920"	"2095.07818"	"0.49"	"0.00034"	"16/152"	"16"	"152"	"1845419.69146729"	"HCD"	"MS2"	"2.468385"	"43.9"	"100.000"	"95.4848"	"33737"	"33737"	"33724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"69.3"	""	"75.2"	""	"73.8"	""	"39.8"	""	"78.9"	"81.6"	""	"1203"	"62"	"37.000"	"30.000"	"3.81272631321042E-05"	"17"	"0"	"5.463E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.03131"	"2095.07938"	"2095.07818"	"0.57"	"0.00040"	"14/152"	"14"	"152"	"1040286.79003906"	"HCD"	"MS2"	"0"	"27.1"	"100.000"	"95.2192"	"33662"	"33662"	"33639"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.9"	""	"46.2"	""	"38.7"	""	"30.2"	"0.2"	"48.7"	"48.6"	""	"1199"	"50"	"37.000"	"30.000"	"0.000568576868748888"	"16"	"0"	"2.247E-06"	"0.993"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MATEVAADALGEEWK"	"[R].mATEVAADALGEEWk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"P62755"	"40S ribosomal protein S6 OS=Rattus norvegicus OX=10116 GN=Rps6 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"699.03186"	"2095.08103"	"2095.07818"	"1.36"	"0.00095"	"12/132"	"12"	"132"	"528504.669616699"	"HCD"	"MS2"	"67.00528"	"15.4"	"100.000"	"108.6148"	"38980"	"38980"	"38975"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.1"	""	"10.8"	""	"11.3"	"2.6"	"39.4"	""	"34.5"	"27.8"	""	"1199"	"13"	"37.000"	"30.000"	"3.29449753877646"	"13"	"0.001488"	"0.01269"	"0.22"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKPESDELTAEK"	"[K].ykPESDELTAEk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"699.72717"	"2097.16697"	"2097.16826"	"-0.62"	"-0.00043"	"8/122"	"8"	"122"	"1366142.36846924"	"HCD"	"MS2"	"4.55182"	"88.0"	"100.000"	"60.6417"	"19675"	"19675"	"19657"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"169.7"	""	"79.9"	""	"91.9"	""	"168.3"	"2.5"	"163.4"	"158.2"	""	"1042"	"36"	"37.000"	"30.000"	"0.0139906445618808"	"21"	"0"	"1.638E-05"	"0.815"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YKPESDELTAEK"	"[K].ykPESDELTAEk.[I]"	"N-Term(TMT6plex); K2(TMT6plex); K12(TMT6plex)"	"1"	"1"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"P04785"	"Protein disulfide-isomerase OS=Rattus norvegicus OX=10116 GN=P4hb PE=1 SV=2"	"0"	"3"	"3"	"0.9333"	"0.0000"	"1"	"1"	"1"	"699.72760"	"2097.16825"	"2097.16826"	"-0.01"	"0.00000"	"9/122"	"9"	"122"	"1589278.71948242"	"HCD"	"MS2"	"3.515742"	"106.6"	"100.000"	"60.7088"	"19670"	"19670"	"19647"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"187.0"	""	"104.4"	""	"104.5"	""	"189.6"	""	"222.0"	"205.7"	""	"1030"	"15"	"37.000"	"30.000"	"1.64743098149107"	"15"	"0"	"0.0001149"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYGHLDDPANQEIER"	"[K].iVYGHLDDPANQEIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"700.03009"	"2098.07572"	"2098.07665"	"-0.44"	"-0.00031"	"16/146"	"16"	"146"	"889006.014404297"	"HCD"	"MS2"	"2.714417"	"19.2"	"100.000"	"76.5162"	"26083"	"26083"	"26061"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.9"	""	"26.0"	""	"24.8"	""	"26.6"	"1.6"	"33.9"	"35.7"	""	"1255"	"41"	"37.000"	"30.000"	"0.00467319313626008"	"15"	"0"	"1.988E-06"	"1.004"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVYGHLDDPANQEIER"	"[K].iVYGHLDDPANQEIER.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"0.9111"	"0.0000"	"1"	"1"	"1"	"700.03058"	"2098.07718"	"2098.07665"	"0.25"	"0.00018"	"16/146"	"16"	"146"	"1163846.86169434"	"HCD"	"MS2"	"2.60628"	"19.8"	"100.000"	"76.5471"	"26127"	"26127"	"26105"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.2"	""	"28.6"	""	"29.0"	""	"27.2"	""	"31.4"	"37.9"	""	"1257"	"45"	"37.000"	"30.000"	"0.00212963552133489"	"19"	"0"	"5.869E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].aNGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.9383"	"0.0000"	"1"	"1"	"1"	"700.38782"	"2099.14890"	"2099.14970"	"-0.38"	"-0.00027"	"19/176"	"19"	"176"	"2100066.18353271"	"HCD"	"MS2"	"4.776187"	"50.5"	"100.000"	"57.4861"	"18392"	"18392"	"18372"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"91.8"	""	"82.3"	""	"61.4"	""	"69.2"	"3.1"	"84.9"	"84.6"	""	"1184"	"81"	"37.000"	"30.000"	"4.40881328552345E-07"	"23"	"0"	"2.994E-09"	"1.585"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.7018"	"0.0000"	"1"	"1"	"1"	"700.71472"	"2100.12961"	"2100.13372"	"-1.96"	"-0.00137"	"18/176"	"18"	"176"	"2201833.07232666"	"HCD"	"MS2"	"14.08772"	"54.8"	"100.000"	"63.9045"	"20998"	"20998"	"20979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"98.1"	""	"87.8"	""	"75.2"	""	"75.4"	""	"95.4"	"89.8"	""	"1252"	"57"	"37.000"	"30.000"	"0.000132609407066556"	"22"	"0"	"2.962E-07"	"1.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"700.71478"	"2100.12979"	"2100.13372"	"-1.87"	"-0.00131"	"19/176"	"19"	"176"	"2247731.4140625"	"HCD"	"MS2"	"6.855415"	"55.3"	"100.000"	"63.8946"	"20962"	"20962"	"20946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"93.5"	""	"103.2"	""	"71.5"	""	"76.2"	"2.0"	"94.0"	"82.0"	""	"1250"	"63"	"37.000"	"30.000"	"3.4904387171052E-05"	"18"	"0"	"5.95E-09"	"1.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.7121"	"0.0000"	"1"	"1"	"1"	"700.71570"	"2100.13254"	"2100.13372"	"-0.56"	"-0.00039"	"19/176"	"19"	"176"	"2210694.06665039"	"HCD"	"MS2"	"0"	"49.7"	"100.000"	"64.1533"	"21065"	"21065"	"21060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"90.3"	""	"84.7"	""	"69.1"	""	"63.2"	""	"81.5"	"80.6"	""	"1242"	"66"	"37.000"	"30.000"	"1.61098538387578E-05"	"26"	"0"	"2.208E-08"	"1.406"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ANGAPISQGVDTANPTK"	"[K].anGAPISQGVDTANPTk.[Q]"	"N-Term(TMT6plex); N2(Deamidated); K17(TMT6plex)"	"1"	"1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"P20767"	"Ig lambda-2 chain C region OS=Rattus norvegicus OX=10116 PE=4 SV=1"	"0"	"3"	"3"	"0.5732"	"0.0000"	"1"	"1"	"1"	"700.71576"	"2100.13272"	"2100.13372"	"-0.47"	"-0.00033"	"18/176"	"18"	"176"	"1967443.02996826"	"HCD"	"MS2"	"0"	"42.0"	"100.000"	"64.2048"	"21119"	"21119"	"21104"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"80.1"	""	"68.3"	""	"56.5"	""	"54.9"	"0.4"	"74.3"	"63.0"	""	"1238"	"82"	"37.000"	"30.000"	"3.87873982232175E-07"	"18"	"0"	"2.508E-09"	"1.6"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RNLDIERPTYTNLNR"	"[R].rNLDIERPTYTNLNR.[L]"	"N-Term(TMT6plex)"	"2"	"6"	"P68370; Q5XIF6"	"Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1;Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"Q68FR8; Q6AYZ1; P68370; Q6AY56; Q6P9V9; Q5XIF6"	"Tubulin alpha-3 chain OS=Rattus norvegicus OX=10116 GN=Tuba3a PE=2 SV=1; Tubulin alpha-1C chain OS=Rattus norvegicus OX=10116 GN=Tuba1c PE=1 SV=1; Tubulin alpha-1A chain OS=Rattus norvegicus OX=10116 GN=Tuba1a PE=1 SV=1; Tubulin alpha-8 chain OS=Rattus norvegicus OX=10116 GN=Tuba8 PE=2 SV=1; Tubulin alpha-1B chain OS=Rattus norvegicus OX=10116 GN=Tuba1b PE=1 SV=1; Tubulin alpha-4A chain OS=Rattus norvegicus OX=10116 GN=Tuba4a PE=1 SV=1"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"526.79236"	"2104.14760"	"2104.14607"	"0.73"	"0.00038"	"12/154"	"12"	"154"	"1051456.0166626"	"HCD"	"MS2"	"15.13449"	"26.6"	"100.000"	"49.6753"	"15187"	"15187"	"15164"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"29.6"	""	"31.2"	""	"41.6"	""	"60.8"	"47.8"	""	"1348"	"16"	"38.000"	"31.000"	"1.54404479796548"	"14"	"0.0009352"	"0.008099"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISEETTTGVHNLYK"	"[R].gISEETTTGVHNLYk.[M]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.8780"	"0.0000"	"1"	"1"	"1"	"703.05200"	"2107.14145"	"2107.14355"	"-1.00"	"-0.00070"	"15/128"	"15"	"128"	"2789681.80566406"	"HCD"	"MS2"	"2.646235"	"115.7"	"100.000"	"66.1268"	"21869"	"21869"	"21849"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"149.4"	""	"137.1"	""	"140.0"	""	"225.0"	""	"228.2"	"219.1"	""	"1337"	"41"	"38.000"	"31.000"	"0.00588981171605858"	"20"	"0"	"1.02E-06"	"1.064"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GISEETTTGVHNLYK"	"[R].gISEETTTGVHNLYk.[M]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"P10760"	"Adenosylhomocysteinase OS=Rattus norvegicus OX=10116 GN=Ahcy PE=1 SV=3"	"0"	"3"	"3"	"0.9773"	"0.0000"	"1"	"1"	"1"	"703.05231"	"2107.14237"	"2107.14355"	"-0.56"	"-0.00040"	"14/128"	"14"	"128"	"3173609.86779785"	"HCD"	"MS2"	"0"	"123.2"	"100.000"	"66.2267"	"21943"	"21943"	"21926"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"175.1"	""	"148.9"	""	"138.4"	""	"223.5"	"1.7"	"241.0"	"240.2"	""	"1330"	"44"	"38.000"	"31.000"	"0.0029028302843971"	"16"	"0"	"3.855E-06"	"0.945"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.02069"	"2110.04752"	"2110.04983"	"-1.10"	"-0.00077"	"20/188"	"20"	"188"	"1525047.65838623"	"HCD"	"MS2"	"7.347663"	"15.7"	"100.000"	"54.6981"	"17264"	"17264"	"17244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.0"	""	"18.9"	""	"21.2"	""	"21.7"	""	"32.0"	"32.1"	"NoQuanLabels"	"978"	"94"	"36.000"	"29.000"	"2.17424689792394E-08"	"18"	"0"	"3.001E-09"	"1.584"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9538"	"0.0000"	"1"	"1"	"1"	"528.26746"	"2110.04799"	"2110.04983"	"-0.87"	"-0.00046"	"17/188"	"17"	"188"	"4524638.77661133"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"54.7255"	"17276"	"17276"	"17260"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.2"	""	"8.5"	""	"10.3"	""	"14.2"	""	"14.8"	"16.4"	"NoQuanLabels"	"978"	"65"	"36.000"	"29.000"	"1.59701449932272E-05"	"20"	"0"	"8.711E-09"	"1.489"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"704.02118"	"2110.04898"	"2110.04983"	"-0.40"	"-0.00028"	"22/188"	"22"	"188"	"1479848.95367432"	"HCD"	"MS2"	"0"	"15.6"	"100.000"	"55.1371"	"17409"	"17409"	"17389"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"21.2"	""	"20.1"	""	"19.6"	""	"32.6"	"33.9"	"NoQuanLabels"	"981"	"79"	"36.000"	"29.000"	"6.10434417073865E-07"	"18"	"0"	"7.266E-10"	"1.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9298"	"0.0000"	"1"	"1"	"1"	"528.26782"	"2110.04946"	"2110.04983"	"-0.18"	"-0.00009"	"16/188"	"16"	"188"	"3027821.28948975"	"HCD"	"MS2"	"9.756021"	"9.5"	"100.000"	"54.8499"	"17292"	"17292"	"17273"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"12.9"	""	"9.6"	""	"19.7"	""	"17.1"	"17.6"	"NoQuanLabels"	"981"	"57"	"36.000"	"29.000"	"0.000107557082078939"	"20"	"0"	"2.85E-06"	"0.972"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9206"	"0.0000"	"1"	"1"	"1"	"528.26788"	"2110.04970"	"2110.04983"	"-0.06"	"-0.00003"	"18/188"	"18"	"188"	"4537492.95806885"	"HCD"	"MS2"	"3.579899"	"7.8"	"100.000"	"55.1693"	"17422"	"17422"	"17405"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.7"	""	"9.8"	""	"13.8"	""	"14.2"	""	"14.6"	"13.3"	"NoQuanLabels"	"979"	"63"	"36.000"	"29.000"	"2.39195329898317E-05"	"21"	"0"	"7.367E-08"	"1.298"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"4"	"4"	"0.9474"	"0.0000"	"1"	"1"	"1"	"528.26807"	"2110.05044"	"2110.04983"	"0.29"	"0.00015"	"17/188"	"17"	"188"	"3586574.33123779"	"HCD"	"MS2"	"2.966619"	"12.3"	"100.000"	"54.4474"	"17162"	"17162"	"17141"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"15.7"	""	"12.1"	""	"12.3"	""	"22.8"	"1.4"	"30.1"	"22.5"	"NoQuanLabels"	"995"	"57"	"36.000"	"29.000"	"0.000107100891302538"	"19"	"0"	"4.211E-06"	"0.937"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"704.02271"	"2110.05356"	"2110.04983"	"1.77"	"0.00124"	"18/188"	"18"	"188"	"889803.492919922"	"HCD"	"MS2"	"10.57394"	"23.5"	"100.000"	"54.4063"	"17145"	"17145"	"17125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.5"	""	"21.4"	""	"30.5"	""	"36.2"	""	"53.7"	"49.3"	"NoQuanLabels"	"1020"	"45"	"37.000"	"30.000"	"0.00174409515681992"	"20"	"0"	"1.046E-05"	"0.856"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHMR.[V]"	""	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"0.8980"	"0.0000"	"1"	"1"	"1"	"704.02295"	"2110.05429"	"2110.04983"	"2.11"	"0.00149"	"17/188"	"17"	"188"	"969146.008300781"	"HCD"	"MS2"	"35.55337"	"25.4"	"100.000"	"54.8133"	"17277"	"17277"	"17257"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"35.9"	""	"32.7"	""	"30.9"	""	"41.1"	""	"55.2"	"47.2"	"NoQuanLabels"	"1022"	"49"	"37.000"	"30.000"	"0.000668991962652697"	"21"	"0"	"1.147E-06"	"1.053"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"704.36169"	"2111.07053"	"2111.07309"	"-1.21"	"-0.00085"	"9/152"	"9"	"152"	"146169.661071777"	"HCD"	"MS2"	"29.71872"	"8.2"	"100.000"	"85.2636"	"29651"	"29651"	"29621"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"11.6"	""	"13.1"	""	"10.1"	""	"14.9"	"14.5"	""	"1185"	"19"	"37.000"	"30.000"	"0.710703337116007"	"16"	"0.002628"	"0.0273"	"0.151"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"704.36206"	"2111.07163"	"2111.07309"	"-0.69"	"-0.00049"	"7/152"	"7"	"152"	"207685.848632813"	"HCD"	"MS2"	"27.43336"	"8.9"	"100.000"	"86.9961"	"30313"	"30313"	"30291"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.2"	""	"15.3"	""	"14.1"	""	"11.1"	""	"19.7"	"13.0"	""	"1201"	"27"	"37.000"	"30.000"	"0.123456230288848"	"17"	"0.0001686"	"0.001476"	"0.413"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"704.36218"	"2111.07199"	"2111.07309"	"-0.52"	"-0.00037"	"10/152"	"10"	"152"	"221229.068664551"	"HCD"	"MS2"	"34.6311"	"8.0"	"100.000"	"86.7760"	"30259"	"30259"	"30236"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"12.6"	""	"11.0"	""	"10.9"	""	"15.9"	"17.0"	""	"1205"	"22"	"37.000"	"30.000"	"0.425556326443434"	"16"	"0.0001686"	"0.001159"	"0.435"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.5625"	"0.0000"	"1"	"1"	"1"	"704.36255"	"2111.07309"	"2111.07309"	"0.00"	"0.00000"	"9/152"	"9"	"152"	"143539.486999512"	"HCD"	"MS2"	"69.05563"	"7.7"	"100.000"	"85.4187"	"29684"	"29684"	"29660"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"10.9"	""	"12.5"	""	"12.7"	""	"12.9"	"14.7"	""	"1200"	"16"	"37.000"	"30.000"	"1.59643503587928"	"20"	"0.000264"	"0.00612"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"704.36267"	"2111.07346"	"2111.07309"	"0.17"	"0.00012"	"4/152"	"4"	"152"	"164044.192504883"	"HCD"	"MS2"	"21.98046"	"7.2"	"100.000"	"88.2117"	"30801"	"30801"	"30772"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"6.8"	""	"11.0"	""	"7.9"	""	"14.6"	"18.0"	""	"1198"	"12"	"37.000"	"30.000"	"3.60933192058541"	"14"	"0.004593"	"0.05426"	"0.087"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.8824"	"0.0000"	"1"	"1"	"1"	"704.36298"	"2111.07437"	"2111.07309"	"0.61"	"0.00043"	"6/152"	"6"	"152"	"136153.791015625"	"HCD"	"MS2"	"14.03737"	"6.9"	"100.000"	"92.1764"	"32436"	"32436"	"32414"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.2"	""	"9.2"	""	"10.1"	""	"9.5"	""	"13.6"	"13.7"	""	"1201"	"17"	"37.000"	"30.000"	"1.12852974849036"	"16"	"0.002525"	"0.02491"	"0.159"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDATANDVPSPYEVK"	"[K].mDATANDVPSPYEVk.[G]"	"N-Term(TMT6plex); M1(Oxidation); K15(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"704.36304"	"2111.07456"	"2111.07309"	"0.69"	"0.00049"	"11/152"	"11"	"152"	"180620.000793457"	"HCD"	"MS2"	"12.03206"	"9.9"	"100.000"	"88.9134"	"31124"	"31124"	"31100"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.7"	""	"12.3"	""	"14.7"	""	"16.5"	""	"17.7"	"20.5"	""	"1203"	"32"	"37.000"	"30.000"	"0.0392858027417454"	"17"	"9.9E-05"	"0.0005641"	"0.499"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGQVAVFGSDLQEK"	"[R].yDGQVAVFGSDLQEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.7333"	"0.0000"	"1"	"1"	"1"	"705.37726"	"2114.11722"	"2114.11701"	"0.10"	"0.00007"	"15/158"	"15"	"158"	"473713.256958008"	"HCD"	"MS2"	"11.18098"	"13.8"	"100.000"	"106.4110"	"38137"	"38137"	"38119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.4"	""	"23.0"	""	"20.7"	""	"13.8"	""	"21.5"	"24.1"	""	"1295"	"30"	"38.000"	"31.000"	"0.065953792376504"	"22"	"0"	"5.228E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YDGQVAVFGSDLQEK"	"[R].yDGQVAVFGSDLQEk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"Q5U300"	"Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus OX=10116 GN=Uba1 PE=1 SV=1"	"0"	"3"	"3"	"0.9762"	"0.0000"	"1"	"1"	"1"	"705.37781"	"2114.11887"	"2114.11701"	"0.88"	"0.00062"	"13/158"	"13"	"158"	"516726.561645508"	"HCD"	"MS2"	"9.355543"	"17.1"	"100.000"	"106.7863"	"38305"	"38305"	"38288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.9"	""	"25.1"	""	"27.8"	""	"24.1"	""	"27.9"	"26.3"	""	"1302"	"42"	"38.000"	"31.000"	"0.00453503860686111"	"17"	"0"	"2.749E-06"	"0.975"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTTQETITNAETAK"	"[K].tFTTQETITNAETAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1057.57202"	"2114.13677"	"2114.13813"	"-0.65"	"-0.00068"	"6/156"	"6"	"156"	"121107.236755371"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"81.9311"	"28306"	"28306"	"28275"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.5"	""	"6.6"	""	"8.8"	""	"10.0"	""	"12.6"	"10.5"	""	"1272"	"12"	"38.000"	"31.000"	"4.48184791863106"	"13"	"0.006997"	"0.08861"	"0.04"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTTQETITNAETAK"	"[K].tFTTQETITNAETAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.38458"	"2114.13919"	"2114.13813"	"0.50"	"0.00035"	"16/156"	"16"	"156"	"2590484.43865967"	"HCD"	"MS2"	"9.987355"	"87.7"	"100.000"	"81.9404"	"28309"	"28309"	"28291"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"110.7"	""	"98.3"	""	"101.6"	""	"159.6"	""	"172.7"	"197.2"	""	"1266"	"61"	"38.000"	"31.000"	"4.67093377671721E-05"	"16"	"0"	"5.919E-07"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTTQETITNAETAK"	"[K].tFTTQETITNAETAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.38470"	"2114.13956"	"2114.13813"	"0.67"	"0.00048"	"15/156"	"15"	"156"	"1278815.83825684"	"HCD"	"MS2"	"9.41366"	"48.8"	"100.000"	"82.2404"	"28431"	"28431"	"28412"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.4"	""	"48.5"	""	"59.6"	""	"82.3"	"5.2"	"100.5"	"107.5"	""	"1271"	"62"	"38.000"	"31.000"	"3.85580937453495E-05"	"17"	"0"	"6.783E-08"	"1.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTTQETITNAETAK"	"[K].tFTTQETITNAETAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.38470"	"2114.13956"	"2114.13813"	"0.67"	"0.00048"	"16/156"	"16"	"156"	"2751633.87939453"	"HCD"	"MS2"	"10.78148"	"89.8"	"100.000"	"81.9016"	"28265"	"28265"	"28247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"111.1"	""	"94.8"	""	"100.9"	""	"173.7"	""	"177.0"	"196.4"	""	"1271"	"61"	"38.000"	"31.000"	"4.89909154590445E-05"	"16"	"0"	"3.609E-07"	"1.156"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TFTTQETITNAETAK"	"[K].tFTTQETITNAETAk.[E]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"Q6P6V0"	"Glucose-6-phosphate isomerase OS=Rattus norvegicus OX=10116 GN=Gpi PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"705.38477"	"2114.13974"	"2114.13813"	"0.76"	"0.00054"	"16/156"	"16"	"156"	"1154251.45965576"	"HCD"	"MS2"	"30.96402"	"58.1"	"100.000"	"82.1992"	"28386"	"28386"	"28368"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"67.7"	""	"66.5"	""	"67.7"	""	"103.1"	"0.4"	"123.9"	"122.4"	""	"1271"	"43"	"38.000"	"31.000"	"0.00297930904353316"	"15"	"0"	"2.078E-06"	"1"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EQGVTFPSGEAQEQLIR"	"[K].eQGVTFPSGEAQEQLIR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"706.70618"	"2118.10398"	"2118.10286"	"0.53"	"0.00037"	"11/182"	"11"	"182"	"136266.201171875"	"HCD"	"MS2"	"24.83615"	"7.4"	"100.000"	"96.1651"	"34045"	"34045"	"34022"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.2"	""	"10.4"	""	"10.2"	""	"12.1"	""	"13.8"	"14.8"	""	"1338"	"27"	"38.000"	"31.000"	"0.139773911154135"	"17"	"0.0001991"	"0.002009"	"0.386"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHLNDNPLGDEGLK"	"[R].eLHLNDNPLGDEGLk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"0.9310"	"0.0000"	"1"	"1"	"1"	"708.05621"	"2122.15409"	"2122.15445"	"-0.17"	"-0.00012"	"12/154"	"12"	"154"	"1518086.51373291"	"HCD"	"MS2"	"8.704181"	"41.5"	"100.000"	"98.8316"	"35091"	"35091"	"35078"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.4"	""	"50.0"	""	"56.5"	""	"68.5"	""	"76.2"	"79.2"	""	"1241"	"58"	"37.000"	"30.000"	"9.92525756755403E-05"	"21"	"0"	"3.008E-06"	"0.967"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELHLNDNPLGDEGLK"	"[R].eLHLNDNPLGDEGLk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"P29315"	"Ribonuclease inhibitor OS=Rattus norvegicus OX=10116 GN=Rnh1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"708.05664"	"2122.15537"	"2122.15445"	"0.43"	"0.00030"	"11/154"	"11"	"154"	"1360441.83111572"	"HCD"	"MS2"	"26.96273"	"39.0"	"100.000"	"98.8758"	"35138"	"35138"	"35122"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.0"	""	"51.4"	""	"51.3"	""	"59.9"	""	"74.4"	"79.8"	""	"1245"	"39"	"37.000"	"30.000"	"0.00800090945814902"	"15"	"0"	"6.814E-06"	"0.894"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQVAMNPTNTVFDAK"	"[K].nQVAmNPTNTVFDAk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K15(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.8400"	"0.0000"	"1"	"1"	"1"	"708.71021"	"2124.11606"	"2124.11596"	"0.05"	"0.00003"	"13/150"	"13"	"150"	"742422.536560059"	"HCD"	"MS2"	"33.57235"	"27.5"	"100.000"	"78.0613"	"26732"	"26732"	"26713"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"34.3"	""	"36.3"	""	"39.7"	""	"55.9"	"53.0"	""	"1315"	"25"	"38.000"	"31.000"	"0.214731499653311"	"18"	"0"	"3.988E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQVAMNPTNTVFDAK"	"[K].nQVAmNPTNTVFDAk.[R]"	"N-Term(TMT6plex); M5(Oxidation); K15(TMT6plex)"	"1"	"1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"P63018"	"Heat shock cognate 71 kDa protein OS=Rattus norvegicus OX=10116 GN=Hspa8 PE=1 SV=1"	"0"	"3"	"3"	"0.7778"	"0.0000"	"1"	"1"	"1"	"708.71057"	"2124.11716"	"2124.11596"	"0.57"	"0.00040"	"12/150"	"12"	"150"	"772914.821777344"	"HCD"	"MS2"	"21.70739"	"26.4"	"100.000"	"78.0520"	"26701"	"26701"	"26682"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"43.1"	""	"31.3"	""	"36.3"	""	"46.4"	""	"48.7"	"45.4"	""	"1314"	"27"	"38.000"	"31.000"	"0.121777027658353"	"20"	"0"	"5.547E-05"	"0.706"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIAPVADDETAVPNNK"	"[K].lIAPVADDETAVPNNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"0.9388"	"0.0000"	"1"	"1"	"1"	"709.06805"	"2125.18961"	"2125.19050"	"-0.42"	"-0.00030"	"7/130"	"7"	"130"	"605181.589599609"	"HCD"	"MS2"	"0"	"19.3"	"100.000"	"97.4745"	"34541"	"34541"	"34522"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.3"	""	"28.2"	""	"24.7"	""	"25.1"	""	"34.6"	"41.1"	""	"1077"	"49"	"37.000"	"30.000"	"0.000734828019053136"	"19"	"0"	"9.231E-07"	"1.072"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIAPVADDETAVPNNK"	"[K].lIAPVADDETAVPNNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.06818"	"2125.18998"	"2125.19050"	"-0.25"	"-0.00018"	"13/130"	"13"	"130"	"578519.545837402"	"HCD"	"MS2"	"2.623641"	"20.6"	"100.000"	"97.5460"	"34601"	"34601"	"34584"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"36.5"	""	"27.9"	""	"27.9"	""	"29.9"	""	"28.1"	"46.6"	""	"1079"	"39"	"37.000"	"30.000"	"0.00756817993611176"	"15"	"0"	"4.468E-07"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIAPVADDETAVPNNK"	"[K].lIAPVADDETAVPNNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.06830"	"2125.19034"	"2125.19050"	"-0.08"	"-0.00005"	"15/130"	"15"	"130"	"1740747.93255615"	"HCD"	"MS2"	"0"	"46.1"	"100.000"	"97.2391"	"34477"	"34477"	"34458"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.1"	""	"59.5"	""	"62.0"	""	"82.1"	"1.9"	"74.3"	"81.1"	""	"1065"	"36"	"37.000"	"30.000"	"0.0125985223891117"	"15"	"0"	"1.389E-07"	"1.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIAPVADDETAVPNNK"	"[K].lIAPVADDETAVPNNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.06842"	"2125.19071"	"2125.19050"	"0.10"	"0.00007"	"15/130"	"15"	"130"	"1885880.4473877"	"HCD"	"MS2"	"0.8639484"	"44.1"	"100.000"	"97.1811"	"34423"	"34423"	"34409"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"78.4"	""	"60.5"	""	"58.7"	""	"74.6"	""	"72.3"	"75.2"	""	"1068"	"40"	"37.000"	"30.000"	"0.00491520071316193"	"15"	"0"	"1.249E-07"	"1.251"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LIAPVADDETAVPNNK"	"[K].lIAPVADDETAVPNNk.[I]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"P42123"	"L-lactate dehydrogenase B chain OS=Rattus norvegicus OX=10116 GN=Ldhb PE=1 SV=2"	"0"	"2"	"2"	"0.7500"	"0.0000"	"1"	"1"	"1"	"1063.10034"	"2125.19341"	"2125.19050"	"1.37"	"0.00145"	"3/130"	"3"	"130"	"71242.6528320313"	"HCD"	"MS2"	"0"	"1.9"	"100.000"	"97.4005"	"34543"	"34543"	"34518"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.4"	""	"4.5"	""	"4.0"	""	"2.2"	""	"2.6"	""	""	"1047"	"4"	"37.000"	"30.000"	"21.772920459362"	"14"	"0.002559"	"0.02541"	"0.157"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHmR.[V]"	"M18(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.35278"	"2126.04380"	"2126.04475"	"-0.45"	"-0.00032"	"16/188"	"16"	"188"	"1036003.78881836"	"HCD"	"MS2"	"10.5282"	"18.1"	"100.000"	"45.4778"	"13521"	"13521"	"13496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.9"	""	"23.0"	""	"24.0"	""	"36.6"	""	"32.3"	"30.5"	"NoQuanLabels"	"981"	"33"	"36.000"	"29.000"	"0.0222146262942726"	"15"	"0"	"0.0002302"	"0.579"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VHLSFSPSQSLPASQTHMR"	"[K].VHLSFSPSQSLPASQTHmR.[V]"	"M18(Oxidation)"	"2"	"3"	"Q03626; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1;Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"Q03626; Q6IE52; P14046"	"Murinoglobulin-1 OS=Rattus norvegicus OX=10116 GN=Mug1 PE=2 SV=1; Murinoglobulin-2 OS=Rattus norvegicus OX=10116 GN=Mug2 PE=1 SV=1; Alpha-1-inhibitor 3 OS=Rattus norvegicus OX=10116 GN=A1i3 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"709.35370"	"2126.04654"	"2126.04475"	"0.84"	"0.00060"	"12/188"	"12"	"188"	"831880.21295166"	"HCD"	"MS2"	"10.98729"	"16.6"	"100.000"	"45.7459"	"13596"	"13596"	"13573"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"14.8"	""	"18.7"	""	"35.0"	""	"33.9"	"31.2"	"NoQuanLabels"	"1013"	"32"	"37.000"	"30.000"	"0.0301702875697444"	"15"	"0"	"5.425E-05"	"0.708"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NQLTSNPENTVFDAK"	"[K].nQLTSNPENTVFDAk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"P06761"	"Endoplasmic reticulum chaperone BiP OS=Rattus norvegicus OX=10116 GN=Hspa5 PE=1 SV=1"	"0"	"3"	"3"	"0.4783"	"0.0000"	"1"	"1"	"1"	"712.71539"	"2136.13163"	"2136.13372"	"-0.98"	"-0.00070"	"10/158"	"10"	"158"	"316692.768249512"	"HCD"	"MS2"	"25.61222"	"15.5"	"100.000"	"91.6738"	"32232"	"32232"	"32210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.4"	""	"22.6"	""	"23.3"	""	"26.5"	"1.6"	"25.3"	"25.1"	""	"1255"	"23"	"37.000"	"30.000"	"0.344043795487836"	"26"	"0"	"0.0001201"	"0.637"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGFPQPSPSDDPSLSPR"	"[K].qPGFPQPSPSDDPSLSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.36060"	"2138.06723"	"2138.07156"	"-2.02"	"-0.00144"	"10/186"	"10"	"186"	"343325.450561523"	"HCD"	"MS2"	"6.999885"	"11.1"	"100.000"	"83.5814"	"28971"	"28971"	"28949"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.4"	""	"12.9"	""	"13.3"	""	"19.1"	"1.1"	"16.3"	"25.1"	""	"1090"	"17"	"37.000"	"30.000"	"1.10000966820645"	"14"	"0.0001991"	"0.003048"	"0.348"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QPGFPQPSPSDDPSLSPR"	"[K].qPGFPQPSPSDDPSLSPR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"Q99MC0"	"Protein phosphatase 1 regulatory subunit 14A OS=Rattus norvegicus OX=10116 GN=Ppp1r14a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.36230"	"2138.07236"	"2138.07156"	"0.37"	"0.00027"	"7/186"	"7"	"186"	"242157.298034668"	"HCD"	"MS2"	"27.16123"	"5.8"	"100.000"	"83.3447"	"28847"	"28847"	"28821"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.2"	""	"7.3"	""	"8.3"	""	"8.9"	""	"13.8"	"11.2"	""	"1104"	"17"	"37.000"	"30.000"	"1.14799257128124"	"14"	"0.0001991"	"0.005148"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.9074"	"0.0000"	"1"	"1"	"1"	"713.68323"	"2139.03513"	"2139.04166"	"-3.05"	"-0.00218"	"17/184"	"17"	"184"	"560472.961303711"	"HCD"	"MS2"	"46.72046"	"9.4"	"100.000"	"57.2675"	"18303"	"18303"	"18279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.6"	""	"10.0"	""	"14.4"	""	"16.2"	""	"15.4"	"17.3"	""	"891"	"54"	"36.000"	"29.000"	"0.000179824022567068"	"21"	"0"	"3.771E-08"	"1.358"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"713.68420"	"2139.03806"	"2139.04166"	"-1.68"	"-0.00120"	"15/184"	"15"	"184"	"412219.46875"	"HCD"	"MS2"	"52.32704"	"8.7"	"100.000"	"57.4909"	"18359"	"18359"	"18330"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.4"	""	"12.4"	""	"10.9"	""	"13.0"	""	"18.3"	"16.9"	""	"916"	"44"	"36.000"	"29.000"	"0.00187441382156345"	"19"	"0"	"4.212E-07"	"1.143"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHNGQVTGIDWAPESNR"	"[K].eHNGQVTGIDWAPESNR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"O88656"	"Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus OX=10116 GN=Arpc1b PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.68604"	"2139.04355"	"2139.04166"	"0.88"	"0.00063"	"12/184"	"12"	"184"	"313108.281005859"	"HCD"	"MS2"	"0"	"13.8"	"100.000"	"57.8289"	"18497"	"18497"	"18470"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.3"	""	"15.0"	""	"14.1"	""	"27.5"	""	"29.3"	"26.1"	""	"953"	"21"	"36.000"	"29.000"	"0.375891846045241"	"14"	"9.9E-05"	"0.001004"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGEHGLYEYTELK"	"[R].eLGEHGLYEYTELk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9677"	"0.0000"	"1"	"1"	"1"	"713.71710"	"2139.13675"	"2139.13741"	"-0.31"	"-0.00022"	"12/126"	"12"	"126"	"2095016.19885254"	"HCD"	"MS2"	"3.938182"	"55.8"	"100.000"	"98.1555"	"34817"	"34817"	"34801"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"86.9"	""	"83.5"	""	"96.5"	""	"89.5"	""	"82.6"	"91.2"	""	"1329"	"31"	"38.000"	"31.000"	"0.0518197108442706"	"16"	"0"	"8.144E-05"	"0.672"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGEHGLYEYTELK"	"[R].eLGEHGLYEYTELk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9444"	"0.0000"	"1"	"1"	"1"	"713.71722"	"2139.13712"	"2139.13741"	"-0.13"	"-0.00010"	"11/126"	"11"	"126"	"1009880.07080078"	"HCD"	"MS2"	"23.53077"	"28.2"	"100.000"	"97.8668"	"34701"	"34701"	"34677"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.3"	""	"41.2"	""	"46.6"	""	"41.4"	""	"36.8"	"49.0"	""	"1325"	"36"	"38.000"	"31.000"	"0.0171864382740371"	"17"	"0"	"2.098E-05"	"0.793"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGEHGLYEYTELK"	"[R].eLGEHGLYEYTELk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"713.71729"	"2139.13730"	"2139.13741"	"-0.05"	"-0.00003"	"11/126"	"11"	"126"	"457577.031188965"	"HCD"	"MS2"	"9.247184"	"16.1"	"100.000"	"98.5105"	"34961"	"34961"	"34943"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.6"	""	"27.9"	""	"23.1"	""	"29.1"	""	"29.2"	"24.6"	""	"1328"	"30"	"38.000"	"31.000"	"0.071972747091008"	"15"	"9.9E-05"	"0.0008593"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGEHGLYEYTELK"	"[R].eLGEHGLYEYTELk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"713.71747"	"2139.13785"	"2139.13741"	"0.21"	"0.00015"	"13/126"	"13"	"126"	"310523.411071777"	"HCD"	"MS2"	"61.7604"	"11.3"	"100.000"	"98.5733"	"35016"	"35016"	"34997"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"15.9"	""	"14.5"	""	"16.2"	""	"17.9"	"19.7"	""	"1324"	"29"	"38.000"	"31.000"	"0.0899203501640697"	"15"	"0"	"0.0002234"	"0.582"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGEHGLYEYTELK"	"[R].eLGEHGLYEYTELk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"713.71765"	"2139.13840"	"2139.13741"	"0.46"	"0.00033"	"15/126"	"15"	"126"	"1819627.18023682"	"HCD"	"MS2"	"7.913688"	"49.6"	"100.000"	"98.2343"	"34879"	"34879"	"34867"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"82.1"	""	"71.2"	""	"75.6"	""	"69.8"	""	"83.9"	"86.8"	""	"1334"	"29"	"38.000"	"31.000"	"0.0820589270131857"	"15"	"0"	"5.686E-05"	"0.704"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELGEHGLYEYTELK"	"[R].eLGEHGLYEYTELk.[T]"	"N-Term(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"P51647"	"Retinal dehydrogenase 1 OS=Rattus norvegicus OX=10116 GN=Aldh1a1 PE=1 SV=3"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"713.71777"	"2139.13877"	"2139.13741"	"0.64"	"0.00045"	"12/126"	"12"	"126"	"1085278.57562256"	"HCD"	"MS2"	"10.36175"	"30.5"	"100.000"	"97.9546"	"34768"	"34768"	"34742"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"54.8"	""	"44.8"	""	"49.5"	""	"44.0"	"0.6"	"47.0"	"47.0"	""	"1332"	"28"	"38.000"	"31.000"	"0.107516279884644"	"16"	"0"	"3.72E-05"	"0.742"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYPHFYDGSEIVVAGR"	"[R].nSYPHFYDGSEIVVAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.02661"	"2140.06528"	"2140.06608"	"-0.38"	"-0.00027"	"15/178"	"15"	"178"	"260604.521179199"	"HCD"	"MS2"	"12.82805"	"7.7"	"100.000"	"90.7535"	"31823"	"31823"	"31808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.7"	""	"8.1"	""	"9.1"	""	"10.7"	""	"19.6"	"17.6"	""	"1029"	"46"	"37.000"	"30.000"	"0.00126294773711995"	"15"	"0"	"1.392E-06"	"1.036"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NSYPHFYDGSEIVVAGR"	"[R].nSYPHFYDGSEIVVAGR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"Q63416"	"Inter-alpha-trypsin inhibitor heavy chain H3 OS=Rattus norvegicus OX=10116 GN=Itih3 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"714.02734"	"2140.06748"	"2140.06608"	"0.65"	"0.00046"	"13/178"	"13"	"178"	"240573.599975586"	"HCD"	"MS2"	"5.310869"	"5.7"	"100.000"	"90.7665"	"31866"	"31866"	"31849"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.9"	""	"8.1"	""	"9.0"	""	"9.1"	""	"8.2"	"12.2"	""	"1051"	"26"	"37.000"	"30.000"	"0.128106958505278"	"14"	"0"	"0.0001438"	"0.621"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLMPAQk.[-]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"714.39374"	"2141.16666"	"2141.16766"	"-0.47"	"-0.00033"	"10/150"	"10"	"150"	"239136.379943848"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"106.6327"	"38226"	"38226"	"38206"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.7"	""	"11.7"	""	"13.1"	""	"9.0"	""	"9.1"	"10.9"	""	"1257"	"24"	"37.000"	"30.000"	"0.274350200562944"	"17"	"0"	"0.0003347"	"0.546"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLMPAQk.[-]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9500"	"0.0000"	"1"	"1"	"1"	"714.39374"	"2141.16666"	"2141.16766"	"-0.47"	"-0.00033"	"8/150"	"8"	"150"	"186300.057434082"	"HCD"	"MS2"	"0"	"5.8"	"100.000"	"106.9111"	"38355"	"38355"	"38335"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.3"	""	"9.4"	""	"7.1"	""	"7.1"	""	"11.9"	"8.0"	""	"1257"	"20"	"37.000"	"30.000"	"0.57056520321699"	"15"	"0.0001686"	"0.001237"	"0.429"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLMPAQk.[-]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"714.39398"	"2141.16739"	"2141.16766"	"-0.13"	"-0.00009"	"11/150"	"11"	"150"	"371703.854187012"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"106.9289"	"38345"	"38345"	"38329"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.1"	""	"17.7"	""	"21.5"	""	"12.1"	""	"19.9"	"14.1"	""	"1256"	"24"	"37.000"	"30.000"	"0.225922582477806"	"17"	"0"	"6.843E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLMPAQk.[-]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9259"	"0.0000"	"1"	"1"	"1"	"714.39429"	"2141.16831"	"2141.16766"	"0.30"	"0.00022"	"11/150"	"11"	"150"	"347967.96862793"	"HCD"	"MS2"	"2.840194"	"9.7"	"100.000"	"107.2306"	"38481"	"38481"	"38468"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"12.6"	""	"15.2"	""	"11.7"	""	"18.1"	"15.0"	""	"1258"	"27"	"37.000"	"30.000"	"0.120129769963816"	"16"	"0"	"4.811E-05"	"0.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNLESLPLVDTHSK"	"[R].eTNLESLPLVDTHSk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9796"	"0.0000"	"1"	"1"	"1"	"714.39984"	"2141.18497"	"2141.18542"	"-0.21"	"-0.00015"	"14/162"	"14"	"162"	"1210358.69219971"	"HCD"	"MS2"	"2.008121"	"33.0"	"100.000"	"93.8172"	"33095"	"33095"	"33078"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"57.6"	""	"38.3"	""	"34.9"	""	"45.9"	""	"68.5"	"70.4"	""	"1147"	"49"	"37.000"	"30.000"	"0.000718676463828902"	"16"	"0"	"2.892E-07"	"1.176"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNLESLPLVDTHSK"	"[R].eTNLESLPLVDTHSk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"714.39990"	"2141.18515"	"2141.18542"	"-0.12"	"-0.00009"	"15/162"	"15"	"162"	"1322443.88677979"	"HCD"	"MS2"	"4.562411"	"35.8"	"100.000"	"93.5122"	"32971"	"32971"	"32952"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.4"	""	"45.1"	""	"39.8"	""	"51.5"	""	"67.0"	"77.7"	""	"1145"	"56"	"37.000"	"30.000"	"0.000140208870595612"	"18"	"0"	"2.548E-07"	"1.188"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ETNLESLPLVDTHSK"	"[R].eTNLESLPLVDTHSk.[R]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"P31000"	"Vimentin OS=Rattus norvegicus OX=10116 GN=Vim PE=1 SV=2"	"0"	"3"	"3"	"0.9221"	"0.0000"	"1"	"1"	"1"	"714.40002"	"2141.18552"	"2141.18542"	"0.05"	"0.00003"	"12/162"	"12"	"162"	"2572581.52453613"	"HCD"	"MS2"	"2.75592"	"60.6"	"100.000"	"93.7690"	"33039"	"33039"	"33021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.3"	""	"65.5"	""	"67.3"	""	"81.3"	"0.5"	"130.1"	"121.3"	""	"1157"	"77"	"37.000"	"30.000"	"1.2598051033063E-06"	"23"	"0"	"1.288E-09"	"1.66"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPNPPIDEVINTPGVVAR"	"[K].ePNPPIDEVINTPGVVAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"716.06067"	"2146.16745"	"2146.17055"	"-1.44"	"-0.00103"	"12/188"	"12"	"188"	"239312.749450684"	"HCD"	"MS2"	"26.11549"	"7.3"	"100.000"	"105.4208"	"37746"	"37746"	"37718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.2"	""	"9.2"	""	"13.1"	""	"7.6"	""	"12.4"	"13.1"	""	"1314"	"24"	"38.000"	"31.000"	"0.270748070046946"	"14"	"9.9E-05"	"0.0004303"	"0.523"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EPNPPIDEVINTPGVVAR"	"[K].ePNPPIDEVINTPGVVAR.[F]"	"N-Term(TMT6plex)"	"1"	"1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"P83953"	"Importin subunit alpha-5 OS=Rattus norvegicus OX=10116 GN=Kpna1 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"1"	"716.06274"	"2146.17368"	"2146.17055"	"1.46"	"0.00104"	"6/188"	"6"	"188"	"176633.026611328"	"HCD"	"MS2"	"5.883981"	"7.9"	"100.000"	"105.7910"	"37912"	"37912"	"37889"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"8.7"	""	"22.1"	""	"9.7"	""	"10.1"	"12.3"	""	"1295"	"0"	"38.000"	"31.000"	"59.5991097710178"	"13"	"0.005507"	"0.06994"	"0.063"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNYATVISHNPETK"	"[R].aSGNYATVISHNPETk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.9455"	"0.0000"	"1"	"1"	"1"	"716.38708"	"2147.14670"	"2147.14970"	"-1.40"	"-0.00100"	"12/170"	"12"	"170"	"637639.353210449"	"HCD"	"MS2"	"0"	"27.4"	"100.000"	"54.1506"	"17041"	"17041"	"17015"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"38.6"	""	"30.9"	""	"33.3"	""	"51.5"	"0.9"	"49.8"	"54.7"	""	"1323"	"55"	"38.000"	"31.000"	"0.000230956318689085"	"19"	"0"	"2.137E-07"	"1.203"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNYATVISHNPETK"	"[R].aSGNYATVISHNPETk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.9592"	"0.0000"	"1"	"1"	"1"	"716.38776"	"2147.14872"	"2147.14970"	"-0.46"	"-0.00033"	"14/170"	"14"	"170"	"389066.158447266"	"HCD"	"MS2"	"3.309106"	"18.4"	"100.000"	"54.5831"	"17184"	"17184"	"17157"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"29.7"	""	"18.5"	""	"24.1"	""	"28.1"	""	"39.6"	"35.5"	""	"1335"	"49"	"38.000"	"31.000"	"0.000802511510107123"	"18"	"0"	"4.872E-06"	"0.924"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNYATVISHNPETK"	"[R].aSGNYATVISHNPETk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.9474"	"0.0000"	"1"	"1"	"1"	"716.38831"	"2147.15036"	"2147.14970"	"0.31"	"0.00022"	"16/170"	"16"	"170"	"1035249.36761475"	"HCD"	"MS2"	"0"	"33.8"	"100.000"	"54.2289"	"17039"	"17039"	"17021"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"44.0"	""	"39.6"	""	"34.2"	""	"63.4"	""	"77.0"	"64.8"	""	"1330"	"57"	"38.000"	"31.000"	"0.000134530775382105"	"19"	"0"	"1.919E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGNYATVISHNPETK"	"[R].aSGNYATVISHNPETk.[K]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"P62919"	"60S ribosomal protein L8 OS=Rattus norvegicus OX=10116 GN=Rpl8 PE=2 SV=2"	"0"	"3"	"3"	"0.9375"	"0.0000"	"1"	"1"	"1"	"716.38885"	"2147.15201"	"2147.14970"	"1.08"	"0.00077"	"11/170"	"11"	"170"	"880027.010986328"	"HCD"	"MS2"	"4.393114"	"31.5"	"100.000"	"53.8148"	"16904"	"16904"	"16878"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"43.4"	""	"39.1"	""	"37.8"	""	"58.3"	""	"67.8"	"54.4"	""	"1333"	"48"	"38.000"	"31.000"	"0.00103705109346478"	"19"	"0"	"1.399E-07"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGADSKGDDLSTAILK"	"[M].aSGADSkGDDLSTAILk.[Q]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"3"	"3"	"0.7143"	"0.0000"	"1"	"1"	"1"	"717.06323"	"2149.17514"	"2149.17525"	"-0.05"	"-0.00003"	"10/170"	"10"	"170"	"509185.796020508"	"HCD"	"MS2"	"2.477029"	"23.3"	"100.000"	"101.7267"	"36265"	"36265"	"36248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"38.4"	""	"28.8"	""	"54.6"	""	"26.8"	"4.1"	"33.8"	"33.6"	""	"1311"	"14"	"38.000"	"31.000"	"2.50364469535651"	"18"	"0.001488"	"0.01285"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ASGADSKGDDLSTAILK"	"[M].aSGADSkGDDLSTAILk.[Q]"	"N-Term(Prot)(Acetyl); K7(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"1"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"717.06342"	"2149.17569"	"2149.17525"	"0.21"	"0.00015"	"12/170"	"12"	"170"	"695907.384155273"	"HCD"	"MS2"	"1.910107"	"30.7"	"100.000"	"101.8372"	"36334"	"36334"	"36323"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"60.7"	""	"31.8"	""	"57.1"	""	"44.0"	"3.8"	"45.5"	"46.8"	""	"1304"	"20"	"38.000"	"31.000"	"0.721518707153438"	"18"	"0.0001991"	"0.005157"	"0.301"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GAEAANVTGPGGVPVQGSK"	"[K].gAEAANVTGPGGVPVQGSk.[Y]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P62961"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3"	"P62961"	"Nuclease-sensitive element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ybx1 PE=2 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"718.73541"	"2154.19168"	"2154.19190"	"-0.10"	"-0.00007"	"14/200"	"14"	"200"	"405534.277893066"	"HCD"	"MS2"	"61.33583"	"21.4"	"100.000"	"63.1365"	"20686"	"20686"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"32.1"	""	"26.5"	""	"24.4"	""	"38.7"	""	"41.3"	"41.1"	""	"1161"	"19"	"37.000"	"30.000"	"0.657358410858241"	"14"	"9.9E-05"	"0.0007023"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDPDVAYSSIPYEK"	"[K].dVDPDVAYSSIPYEk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"719.37653"	"2156.11502"	"2156.11634"	"-0.61"	"-0.00044"	"7/138"	"7"	"138"	"295196.899291992"	"HCD"	"MS2"	"14.00367"	"11.1"	"100.000"	"104.8286"	"37508"	"37508"	"37494"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"17.2"	""	"13.6"	""	"19.0"	""	"17.8"	"18.8"	""	"1284"	"21"	"38.000"	"31.000"	"0.45870664134048"	"17"	"9.9E-05"	"0.000726"	"0.477"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDPDVAYSSIPYEK"	"[K].dVDPDVAYSSIPYEk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.37677"	"2156.11576"	"2156.11634"	"-0.27"	"-0.00019"	"10/138"	"10"	"138"	"223310.956604004"	"HCD"	"MS2"	"42.79753"	"8.4"	"100.000"	"105.1007"	"37636"	"37636"	"37614"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.1"	""	"9.8"	""	"11.9"	""	"12.8"	""	"12.8"	"20.2"	""	"1285"	"26"	"38.000"	"31.000"	"0.144169413603043"	"15"	"9.9E-05"	"0.0009049"	"0.457"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDPDVAYSSIPYEK"	"[K].dVDPDVAYSSIPYEk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"719.37689"	"2156.11612"	"2156.11634"	"-0.10"	"-0.00007"	"7/138"	"7"	"138"	"165193.959533691"	"HCD"	"MS2"	"6.264371"	"6.6"	"100.000"	"105.1149"	"37622"	"37622"	"37610"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.9"	""	"8.5"	""	"10.8"	""	"10.3"	""	"10.9"	"14.6"	""	"1286"	"19"	"38.000"	"31.000"	"0.758946168724062"	"16"	"0.0001991"	"0.002023"	"0.385"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DVDPDVAYSSIPYEK"	"[K].dVDPDVAYSSIPYEk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"P30349"	"Leukotriene A-4 hydrolase OS=Rattus norvegicus OX=10116 GN=Lta4h PE=2 SV=2"	"0"	"3"	"3"	"0.9667"	"0.0000"	"1"	"1"	"1"	"719.37714"	"2156.11686"	"2156.11634"	"0.24"	"0.00017"	"10/138"	"10"	"138"	"222135.53717041"	"HCD"	"MS2"	"4.136918"	"9.8"	"100.000"	"105.3786"	"37745"	"37745"	"37731"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"7.8"	""	"15.8"	""	"15.0"	""	"17.8"	"25.3"	""	"1285"	"30"	"38.000"	"31.000"	"0.0720896856889011"	"15"	"9.9E-05"	"0.0008356"	"0.464"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLmPAQk.[-]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"719.72510"	"2157.16074"	"2157.16258"	"-0.85"	"-0.00061"	"12/150"	"12"	"150"	"321831.354370117"	"HCD"	"MS2"	"0"	"13.5"	"100.000"	"92.8762"	"32715"	"32715"	"32691"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.0"	""	"14.8"	""	"20.1"	""	"27.0"	""	"21.5"	"22.5"	""	"1257"	"32"	"37.000"	"30.000"	"0.0427863541939017"	"19"	"0"	"0.0002572"	"0.569"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLmPAQk.[-]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.6400"	"0.0000"	"1"	"1"	"1"	"719.72540"	"2157.16166"	"2157.16258"	"-0.43"	"-0.00031"	"10/150"	"10"	"150"	"290380.796203613"	"HCD"	"MS2"	"0"	"11.4"	"100.000"	"92.9519"	"32710"	"32710"	"32683"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.4"	""	"11.4"	""	"17.8"	""	"18.0"	""	"21.2"	"20.1"	""	"1247"	"25"	"37.000"	"30.000"	"0.20456741525603"	"23"	"9.9E-05"	"0.0004899"	"0.512"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLmPAQk.[-]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"719.72552"	"2157.16202"	"2157.16258"	"-0.26"	"-0.00018"	"11/150"	"11"	"150"	"331317.088989258"	"HCD"	"MS2"	"0"	"14.5"	"100.000"	"93.1781"	"32837"	"32837"	"32816"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.5"	""	"16.3"	""	"19.0"	""	"36.5"	""	"21.9"	"23.9"	""	"1242"	"27"	"37.000"	"30.000"	"0.118056961183237"	"15"	"0"	"0.0001159"	"0.641"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LEQGQPIDDLMPAQK"	"[R].lEQGQPIDDLmPAQk.[-]"	"N-Term(TMT6plex); M11(Oxidation); K15(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"719.72607"	"2157.16367"	"2157.16258"	"0.51"	"0.00036"	"12/150"	"12"	"150"	"359343.64074707"	"HCD"	"MS2"	"3.816132"	"14.0"	"100.000"	"93.2561"	"32832"	"32832"	"32813"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.4"	""	"19.0"	""	"17.9"	""	"34.6"	""	"20.8"	"22.0"	""	"1242"	"36"	"37.000"	"30.000"	"0.0147601781799405"	"18"	"0"	"0.000107"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIGPGIDVPAPDMSTGER"	"[K].gFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1081.04211"	"2161.07695"	"2161.07969"	"-1.26"	"-0.00137"	"4/164"	"4"	"164"	"72998.8768310547"	"HCD"	"MS2"	"0"	"1.2"	"100.000"	"105.8603"	"37940"	"37940"	"37915"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.1"	""	"2.1"	""	""	""	""	""	"3.7"	"2.4"	""	"1098"	"11"	"37.000"	"30.000"	"4.38099083310119"	"13"	"0.001951"	"0.01664"	"0.196"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIGPGIDVPAPDMSTGER"	"[K].gFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.03082"	"2161.07792"	"2161.07969"	"-0.82"	"-0.00059"	"12/164"	"12"	"164"	"287398.082397461"	"HCD"	"MS2"	"6.435792"	"4.3"	"100.000"	"105.4600"	"37761"	"37761"	"37747"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.1"	""	"7.7"	""	"4.2"	""	"9.5"	""	"10.2"	"5.0"	""	"1106"	"28"	"37.000"	"30.000"	"0.0913534874420645"	"14"	"0"	"7.353E-05"	"0.681"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIGPGIDVPAPDMSTGER"	"[K].gFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"721.03101"	"2161.07846"	"2161.07969"	"-0.56"	"-0.00041"	"11/164"	"11"	"164"	"246701.054626465"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"105.7262"	"37886"	"37886"	"37865"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"3.6"	""	"6.3"	""	"10.0"	""	"7.5"	"10.6"	""	"1097"	"31"	"37.000"	"30.000"	"0.0391901234852419"	"17"	"0"	"0.0002082"	"0.588"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIGPGIDVPAPDMSTGER"	"[K].gFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.03113"	"2161.07883"	"2161.07969"	"-0.40"	"-0.00028"	"17/164"	"17"	"164"	"912837.146789551"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"105.7582"	"37880"	"37880"	"37865"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.8"	""	"10.7"	""	"10.4"	""	"15.9"	""	"20.9"	"12.8"	""	"1101"	"47"	"37.000"	"30.000"	"0.00102744201980449"	"15"	"0"	"5.178E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIGPGIDVPAPDMSTGER"	"[K].gFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1081.04321"	"2161.07915"	"2161.07969"	"-0.25"	"-0.00027"	"5/164"	"5"	"164"	"63356.2840576172"	"HCD"	"MS2"	"0"	"1.0"	"100.000"	"105.5939"	"37815"	"37815"	"37791"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	""	""	"2.9"	""	"4.2"	""	""	"2.3"	""	"1104"	"10"	"37.000"	"30.000"	"5.82021566807975"	"13"	"0.002875"	"0.03091"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFIGPGIDVPAPDMSTGER"	"[K].gFIGPGIDVPAPDmSTGER.[E]"	"N-Term(TMT6plex); M14(Oxidation)"	"1"	"1"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"P10860"	"Glutamate dehydrogenase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Glud1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"721.03174"	"2161.08066"	"2161.07969"	"0.45"	"0.00033"	"18/164"	"18"	"164"	"1022918.82263184"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"106.0270"	"38006"	"38006"	"37988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"14.5"	""	"9.8"	""	"15.8"	""	"11.9"	"15.6"	""	"1125"	"57"	"37.000"	"30.000"	"0.000105955261283801"	"16"	"0"	"1.608E-07"	"1.229"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPERNECFLQHK"	"[K].qEPERNEcFLQHk.[D]"	"N-Term(TMT6plex); C8(Methylthio); K13(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.27692"	"2162.08584"	"2162.08870"	"-1.32"	"-0.00072"	"7/130"	"7"	"130"	"3530256.54553223"	"HCD"	"MS2"	"16.18324"	"83.7"	"100.000"	"50.6807"	"15597"	"15597"	"15574"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"138.8"	""	"106.6"	""	"93.9"	""	"125.2"	"3.6"	"174.6"	"150.8"	""	"1179"	"16"	"37.000"	"30.000"	"1.56129083170865"	"13"	"0.0001991"	"0.005897"	"0.289"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QEPERNECFLQHK"	"[K].qEPERNEcFLQHk.[D]"	"N-Term(TMT6plex); C8(Methylthio); K13(TMT6plex)"	"1"	"1"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"P02770"	"Serum albumin OS=Rattus norvegicus OX=10116 GN=Alb PE=1 SV=2"	"1"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"541.27765"	"2162.08877"	"2162.08870"	"0.03"	"0.00002"	"11/130"	"11"	"130"	"3684006.36297607"	"HCD"	"MS2"	"13.14893"	"79.5"	"100.000"	"50.2495"	"15456"	"15456"	"15435"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"138.0"	""	"98.7"	""	"91.0"	""	"109.7"	"1.4"	"161.7"	"153.4"	""	"1199"	"14"	"37.000"	"30.000"	"2.26876329537898"	"13"	"0.0001991"	"0.001985"	"0.387"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"TSIDAYDNFDNISLAQR"	"[R].tSIDAYDNFDNISLAQR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"P11442"	"Clathrin heavy chain 1 OS=Rattus norvegicus OX=10116 GN=Cltc PE=1 SV=3"	"0"	"3"	"3"	"0.9643"	"0.0000"	"1"	"1"	"1"	"724.69739"	"2172.07761"	"2172.07704"	"0.26"	"0.00019"	"12/170"	"12"	"170"	"181438.474487305"	"HCD"	"MS2"	"24.69693"	"7.1"	"100.000"	"110.1659"	"39574"	"39574"	"39549"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.6"	""	"9.2"	""	"10.1"	""	"13.7"	""	"12.3"	"13.7"	""	"1024"	"28"	"37.000"	"30.000"	"0.0753824001245552"	"15"	"0"	"3.218E-05"	"0.755"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDGLTALEATDNQAIK"	"[K].gPDGLTALEATDNQAIk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"0"	"3"	"3"	"0.8235"	"0.0000"	"1"	"1"	"1"	"724.73486"	"2172.19004"	"2172.19123"	"-0.55"	"-0.00040"	"15/154"	"15"	"154"	"347951.051757813"	"HCD"	"MS2"	"3.286429"	"14.6"	"100.000"	"102.8072"	"36723"	"36723"	"36705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"11.8"	""	"19.2"	""	"29.2"	""	"30.4"	"27.9"	""	"1159"	"51"	"37.000"	"30.000"	"0.000494371516073193"	"25"	"0"	"5.088E-07"	"1.126"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GPDGLTALEATDNQAIK"	"[K].gPDGLTALEATDNQAIk.[A]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"P62775"	"Myotrophin OS=Rattus norvegicus OX=10116 GN=Mtpn PE=1 SV=2"	"0"	"3"	"3"	"0.7674"	"0.0000"	"1"	"1"	"1"	"724.73541"	"2172.19168"	"2172.19123"	"0.21"	"0.00015"	"15/154"	"15"	"154"	"475356.905151367"	"HCD"	"MS2"	"18.88532"	"17.0"	"100.000"	"102.5689"	"36605"	"36605"	"36577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"28.2"	""	"18.0"	""	"18.3"	""	"34.3"	""	"34.0"	"29.7"	""	"1159"	"43"	"37.000"	"30.000"	"0.00324379530066416"	"25"	"0"	"6.07E-07"	"1.11"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGmSTVPEVIVAR.[H]"	"N-Term(TMT6plex); M1(Oxidation); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"726.38788"	"2177.14908"	"2177.15074"	"-0.76"	"-0.00055"	"14/162"	"14"	"162"	"190634.091003418"	"HCD"	"MS2"	"2.858019"	"4.7"	"100.000"	"104.6511"	"37459"	"37459"	"37447"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.8"	""	"4.9"	""	"5.4"	""	"8.9"	""	"9.7"	"10.8"	""	"1308"	"42"	"38.000"	"31.000"	"0.00427147381431447"	"15"	"0"	"5.811E-06"	"0.908"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGmSTVPEVIVAR.[H]"	"N-Term(TMT6plex); M1(Oxidation); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9730"	"0.0000"	"1"	"1"	"1"	"726.38861"	"2177.15128"	"2177.15074"	"0.25"	"0.00018"	"17/162"	"17"	"162"	"1036454.01074219"	"HCD"	"MS2"	"0"	"5.4"	"100.000"	"104.1358"	"37235"	"37235"	"37220"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.5"	""	"7.8"	""	"4.8"	""	"15.2"	""	"10.4"	"9.9"	""	"1283"	"74"	"38.000"	"31.000"	"2.52462373404881E-06"	"19"	"0"	"2.864E-08"	"1.383"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MLGADAVGMSTVPEVIVAR"	"[R].mLGADAVGmSTVPEVIVAR.[H]"	"N-Term(TMT6plex); M1(Oxidation); M9(Oxidation)"	"1"	"1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"P85973"	"Purine nucleoside phosphorylase OS=Rattus norvegicus OX=10116 GN=Pnp PE=1 SV=1"	"0"	"3"	"3"	"0.9865"	"0.0000"	"1"	"1"	"1"	"726.38916"	"2177.15293"	"2177.15074"	"1.00"	"0.00073"	"18/162"	"18"	"162"	"1004578.47186279"	"HCD"	"MS2"	"0"	"6.4"	"100.000"	"104.3713"	"37347"	"37347"	"37328"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.2"	""	"5.2"	""	"6.5"	""	"21.1"	""	"11.3"	"10.3"	""	"1284"	"74"	"38.000"	"31.000"	"2.38525617080385E-06"	"18"	"0"	"4.036E-09"	"1.558"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].VAPEEHPVLLTEAPLNPk.[A]"	"K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"728.41406"	"2183.22763"	"2183.22734"	"0.14"	"0.00010"	"9/156"	"9"	"156"	"619927.537536621"	"HCD"	"MS2"	"11.02485"	"20.2"	"100.000"	"87.9557"	"30698"	"30698"	"30686"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.7"	""	"27.9"	""	"30.5"	""	"35.3"	""	"31.3"	"44.6"	""	"1033"	"17"	"37.000"	"30.000"	"1.02345870882833"	"14"	"0"	"8.553E-05"	"0.668"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPK.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41449"	"2183.22892"	"2183.22734"	"0.72"	"0.00053"	"9/156"	"9"	"156"	"248028.493408203"	"HCD"	"MS2"	"49.12195"	"8.0"	"100.000"	"91.7523"	"32264"	"32264"	"32237"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"6.8"	""	"15.9"	""	"11.9"	""	"16.8"	"16.2"	""	"1006"	"28"	"37.000"	"30.000"	"0.0766598535160037"	"14"	"0"	"1.619E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].VAPEEHPVLLTEAPLNPk.[A]"	"K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41473"	"2183.22965"	"2183.22734"	"1.06"	"0.00077"	"10/156"	"10"	"156"	"538482.928771973"	"HCD"	"MS2"	"9.057271"	"18.0"	"100.000"	"87.8717"	"30701"	"30701"	"30681"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"24.5"	""	"20.7"	""	"29.8"	""	"34.1"	"42.1"	""	"1005"	"13"	"37.000"	"30.000"	"2.72983291574948"	"14"	"9.9E-05"	"0.0004114"	"0.527"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPK.[A]"	"N-Term(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.41534"	"2183.23148"	"2183.22734"	"1.90"	"0.00138"	"4/156"	"4"	"156"	"246172.398132324"	"HCD"	"MS2"	"11.94617"	"7.6"	"100.000"	"91.8338"	"32261"	"32261"	"32240"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"8.3"	""	"9.8"	""	"17.4"	""	"9.7"	"15.7"	""	"985"	"14"	"36.000"	"29.000"	"1.75552183212425"	"13"	"0"	"0.000107"	"0.648"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.9318"	"0.0000"	"1"	"1"	"1"	"728.71680"	"2184.13584"	"2184.13709"	"-0.57"	"-0.00042"	"16/164"	"16"	"164"	"399641.40838623"	"HCD"	"MS2"	"0"	"14.3"	"100.000"	"95.9137"	"33911"	"33911"	"33881"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.0"	""	"16.0"	""	"13.9"	""	"22.9"	""	"31.0"	"28.3"	""	"1372"	"44"	"38.000"	"31.000"	"0.00269354425684125"	"18"	"0"	"4.59E-07"	"1.135"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.71704"	"2184.13657"	"2184.13709"	"-0.24"	"-0.00017"	"14/164"	"14"	"164"	"386016.077941895"	"HCD"	"MS2"	"0"	"13.4"	"100.000"	"96.2004"	"34026"	"34026"	"34013"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.5"	""	"16.1"	""	"11.6"	""	"22.4"	""	"29.4"	"29.7"	""	"1369"	"41"	"38.000"	"31.000"	"0.00513302586288066"	"15"	"0"	"3.807E-07"	"1.152"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"728.71704"	"2184.13657"	"2184.13709"	"-0.24"	"-0.00017"	"13/164"	"13"	"164"	"529960.433898926"	"HCD"	"MS2"	"14.35854"	"14.8"	"100.000"	"96.2506"	"34079"	"34079"	"34057"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.3"	""	"18.8"	""	"15.0"	""	"24.4"	""	"33.1"	"30.6"	""	"1369"	"39"	"38.000"	"31.000"	"0.00824847101184496"	"15"	"0"	"2.723E-07"	"1.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.9286"	"0.0000"	"1"	"1"	"1"	"728.71771"	"2184.13858"	"2184.13709"	"0.68"	"0.00050"	"16/164"	"16"	"164"	"379511.469116211"	"HCD"	"MS2"	"4.932852"	"12.8"	"100.000"	"95.9504"	"33958"	"33958"	"33933"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"19.1"	""	"18.1"	""	"18.2"	""	"24.8"	"25.1"	""	"1401"	"56"	"38.000"	"31.000"	"0.000162707712584815"	"20"	"0"	"5.909E-07"	"1.112"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSAATSTYEVGNPPDYR"	"[R].iDSAATSTYEVGNPPDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"729.02417"	"2185.05796"	"2185.06106"	"-1.42"	"-0.00103"	"11/174"	"11"	"174"	"179034.493225098"	"HCD"	"MS2"	"36.4442"	"8.8"	"100.000"	"86.7090"	"30232"	"30232"	"30210"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"7.9"	"1.9"	"15.3"	""	"11.5"	""	"21.0"	"14.1"	""	"845"	"25"	"36.000"	"29.000"	"0.146496319316194"	"15"	"0"	"3.789E-05"	"0.741"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IDSAATSTYEVGNPPDYR"	"[R].iDSAATSTYEVGNPPDYR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"P41498"	"Low molecular weight phosphotyrosine protein phosphatase OS=Rattus norvegicus OX=10116 GN=Acp1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"729.02515"	"2185.06089"	"2185.06106"	"-0.08"	"-0.00006"	"9/174"	"9"	"174"	"158910.633117676"	"HCD"	"MS2"	"23.14805"	"7.5"	"100.000"	"86.7050"	"30197"	"30197"	"30170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"8.6"	""	"11.8"	""	"13.1"	""	"12.6"	"11.6"	""	"856"	"8"	"36.000"	"29.000"	"7.6110358749666"	"13"	"0.001872"	"0.01566"	"0.201"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDDAIETDDLTIK"	"[K].nYTDDAIETDDLTIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.7647"	"0.0000"	"1"	"1"	"1"	"729.04706"	"2185.12662"	"2185.12763"	"-0.46"	"-0.00034"	"10/160"	"10"	"160"	"240180.370849609"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"104.2257"	"37272"	"37272"	"37249"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.2"	""	"12.0"	""	"12.1"	""	"22.2"	""	"21.2"	"18.2"	""	"1298"	"17"	"38.000"	"31.000"	"1.21967661410532"	"18"	"0.000264"	"0.006135"	"0.286"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYTDDAIETDDLTIK"	"[K].nYTDDAIETDDLTIk.[L]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"P48004"	"Proteasome subunit alpha type-7 OS=Rattus norvegicus OX=10116 GN=Psma7 PE=1 SV=1"	"0"	"3"	"3"	"0.7407"	"0.0000"	"1"	"1"	"1"	"729.04736"	"2185.12754"	"2185.12763"	"-0.04"	"-0.00003"	"9/160"	"9"	"160"	"183775.564880371"	"HCD"	"MS2"	"60.44268"	"7.1"	"100.000"	"104.4865"	"37394"	"37394"	"37373"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"7.1"	""	"4.2"	""	"10.0"	""	"14.9"	"1.3"	"14.2"	"16.1"	""	"1297"	"27"	"38.000"	"31.000"	"0.127911614437048"	"21"	"9.9E-05"	"0.0005166"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISNNCTSYGVLDIGK"	"[K].vISNncTSYGVLDIGk.[C]"	"N-Term(TMT6plex); N5(Deamidated); C6(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"3"	"3"	"7"	"730.05243"	"2188.14273"	"2188.13940"	"1.52"	"0.00111"	"3/164"	"3"	"164"	"255281.285827637"	"HCD"	"MS2"	"63.63762"	"15.3"	"100.000"	"40.0826"	"11295"	"11295"	"11272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.6"	""	"17.3"	""	"28.1"	""	"25.7"	""	"23.9"	"25.1"	""	"1333"	"0"	"38.000"	"31.000"	"66.4967092537733"	"13"	"0.002628"	"0.0274"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VISNNCTSYGVLDIGK"	"[K].vISnNcTSYGVLDIGk.[C]"	"N-Term(TMT6plex); N4(Deamidated); C6(Methylthio); K16(TMT6plex)"	"1"	"1"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"Q07969"	"Platelet glycoprotein 4 OS=Rattus norvegicus OX=10116 GN=Cd36 PE=1 SV=3"	"0"	"3"	"3"	""	"0.0000"	"3"	"4"	"8"	"730.05243"	"2188.14273"	"2188.13940"	"1.52"	"0.00111"	"3/164"	"3"	"164"	"255281.285827637"	"HCD"	"MS2"	"63.63762"	"15.3"	"100.000"	"40.0826"	"11295"	"11295"	"11272"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.6"	""	"17.3"	""	"28.1"	""	"25.7"	""	"23.9"	"25.1"	""	"1333"	"0"	"38.000"	"31.000"	"66.4967092537733"	"13"	"0.002628"	"0.0274"	"0.15"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFDPGQDTYQHPPK"	"[R].sDFDPGQDTYQHPPk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.69928"	"2190.08329"	"2190.08677"	"-1.59"	"-0.00116"	"13/144"	"13"	"144"	"511078.53704834"	"HCD"	"MS2"	"10.10779"	"20.7"	"100.000"	"57.8749"	"18516"	"18516"	"18486"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"51.2"	""	"25.7"	""	"27.1"	""	"28.8"	""	"29.8"	"33.5"	""	"1067"	"29"	"37.000"	"30.000"	"0.0626807845560239"	"14"	"0"	"1.641E-06"	"1.021"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFDPGQDTYQHPPK"	"[R].sDFDPGQDTYQHPPk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.70001"	"2190.08548"	"2190.08677"	"-0.59"	"-0.00043"	"10/144"	"10"	"144"	"1294327.36871338"	"HCD"	"MS2"	"26.92547"	"49.8"	"100.000"	"57.9507"	"18582"	"18582"	"18558"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"97.5"	""	"69.1"	""	"71.6"	""	"67.2"	""	"76.5"	"88.5"	""	"1103"	"43"	"37.000"	"30.000"	"0.00306581197884628"	"15"	"0"	"1.131E-07"	"1.26"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SDFDPGQDTYQHPPK"	"[R].sDFDPGQDTYQHPPk.[D]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"Q9ER34"	"Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"730.70099"	"2190.08841"	"2190.08677"	"0.75"	"0.00055"	"8/144"	"8"	"144"	"1206463.94671631"	"HCD"	"MS2"	"14.55743"	"47.3"	"100.000"	"58.2642"	"18674"	"18674"	"18658"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"98.5"	""	"69.3"	""	"67.5"	""	"54.7"	"0.3"	"79.6"	"76.5"	""	"1115"	"23"	"37.000"	"30.000"	"0.298019630363812"	"14"	"0"	"7.788E-05"	"0.676"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9194"	"0.0000"	"1"	"1"	"1"	"732.03546"	"2194.09183"	"2194.09375"	"-0.88"	"-0.00064"	"15/202"	"15"	"202"	"279616.047668457"	"HCD"	"MS2"	"17.20016"	"4.4"	"100.000"	"101.5953"	"36237"	"36237"	"36214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.4"	""	"3.7"	""	"7.0"	""	"9.7"	""	"9.1"	"6.9"	""	"1161"	"62"	"37.000"	"30.000"	"3.53836168847918E-05"	"21"	"0"	"3.993E-08"	"1.353"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"732.03595"	"2194.09330"	"2194.09375"	"-0.21"	"-0.00015"	"12/202"	"12"	"202"	"300678.999511719"	"HCD"	"MS2"	"14.46432"	"5.7"	"100.000"	"101.3946"	"36130"	"36130"	"36108"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.6"	""	"7.3"	""	"9.3"	""	"9.5"	""	"8.4"	"10.3"	""	"1177"	"58"	"37.000"	"30.000"	"0.000102269578771901"	"19"	"0"	"2.454E-07"	"1.191"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.3846"	"0.0000"	"1"	"1"	"1"	"732.03687"	"2194.09604"	"2194.09375"	"1.04"	"0.00076"	"9/202"	"9"	"202"	"139546.035339355"	"HCD"	"MS2"	"14.75857"	"5.8"	"100.000"	"101.7127"	"36259"	"36259"	"36236"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.2"	""	"9.4"	""	"7.6"	""	"9.1"	""	"10.2"	"11.6"	""	"1190"	"13"	"37.000"	"30.000"	"3.15149749115536"	"22"	"0.0001686"	"0.001776"	"0.397"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"GTGGVDTAAVGGVFDVSNADR"	"[R].gTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"732.03894"	"2194.10227"	"2194.09375"	"3.88"	"0.00284"	"5/202"	"5"	"202"	"149520.835021973"	"HCD"	"MS2"	"33.50993"	"6.3"	"100.000"	"101.9132"	"36365"	"36365"	"36348"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"6.6"	""	"11.3"	""	"9.0"	""	"11.1"	"7.5"	""	"1220"	"5"	"37.000"	"30.000"	"18.4217054944523"	"13"	"0.0001991"	"0.005942"	"0.288"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGNQAAYEHFETMK"	"[R].nPGNQAAYEHFETMk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.36951"	"2195.09397"	"2195.09556"	"-0.72"	"-0.00053"	"13/148"	"13"	"148"	"1777796.10339355"	"HCD"	"MS2"	"15.54803"	"81.5"	"100.000"	"69.4536"	"23216"	"23216"	"23200"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"101.8"	""	"75.8"	""	"83.8"	""	"154.0"	"6.5"	"183.3"	"169.6"	""	"1100"	"42"	"37.000"	"30.000"	"0.00366743723067492"	"15"	"0"	"9.912E-07"	"1.066"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGNQAAYEHFETMK"	"[R].nPGNQAAYEHFETMk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9744"	"0.0000"	"1"	"1"	"1"	"732.36975"	"2195.09470"	"2195.09556"	"-0.39"	"-0.00029"	"14/148"	"14"	"148"	"940322.123291016"	"HCD"	"MS2"	"16.2238"	"46.2"	"100.000"	"69.1659"	"23099"	"23099"	"23076"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"62.2"	""	"48.0"	""	"52.6"	""	"86.7"	"1.1"	"96.6"	"91.3"	""	"1097"	"39"	"37.000"	"30.000"	"0.00645916876476163"	"16"	"0"	"2.034E-07"	"1.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGNQAAYEHFETMK"	"[R].nPGNQAAYEHFETMk.[N]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"732.37012"	"2195.09580"	"2195.09556"	"0.11"	"0.00008"	"13/148"	"13"	"148"	"1236019.60668945"	"HCD"	"MS2"	"24.9978"	"58.7"	"100.000"	"69.3423"	"23205"	"23205"	"23183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"74.6"	""	"64.0"	""	"60.4"	""	"107.6"	"0.3"	"121.8"	"128.7"	""	"1103"	"40"	"37.000"	"30.000"	"0.00525467084459043"	"15"	"0"	"5.767E-07"	"1.115"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVELVTPGAQETEK"	"[K].iPEVELVTPGAQETEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"733.41528"	"2198.23130"	"2198.23204"	"-0.34"	"-0.00025"	"14/152"	"14"	"152"	"420932.688842773"	"HCD"	"MS2"	"3.278343"	"11.2"	"100.000"	"109.0746"	"39152"	"39152"	"39142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.6"	""	"9.1"	""	"11.8"	""	"27.2"	""	"19.4"	"25.1"	""	"1057"	"60"	"37.000"	"30.000"	"5.05877066679326E-05"	"27"	"0"	"1.13E-06"	"1.054"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVELVTPGAQETEK"	"[K].iPEVELVTPGAQETEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.7000"	"0.0000"	"1"	"1"	"1"	"733.41577"	"2198.23276"	"2198.23204"	"0.33"	"0.00024"	"9/152"	"9"	"152"	"146302.619445801"	"HCD"	"MS2"	"4.565381"	"5.6"	"100.000"	"109.6344"	"39375"	"39375"	"39363"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.7"	""	"3.8"	""	"8.4"	""	"13.5"	""	"10.2"	"11.0"	""	"1045"	"20"	"37.000"	"30.000"	"0.486503864931942"	"20"	"0"	"0.000154"	"0.615"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVELVTPGAQETEK"	"[K].iPEVELVTPGAQETEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"733.41608"	"2198.23368"	"2198.23204"	"0.75"	"0.00055"	"11/152"	"11"	"152"	"232723.467224121"	"HCD"	"MS2"	"7.036432"	"7.4"	"100.000"	"109.3514"	"39254"	"39254"	"39247"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"7.4"	""	"9.9"	""	"17.4"	""	"15.0"	"13.5"	""	"1023"	"21"	"37.000"	"30.000"	"0.413852552429742"	"17"	"9.9E-05"	"0.0004803"	"0.514"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IPEVELVTPGAQETEK"	"[K].iPEVELVTPGAQETEk.[V]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"Q63425"	"Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"733.41620"	"2198.23404"	"2198.23204"	"0.91"	"0.00067"	"13/152"	"13"	"152"	"323008.96105957"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"109.3142"	"39256"	"39256"	"39243"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.0"	""	"8.7"	""	"11.3"	""	"20.5"	""	"14.7"	"17.9"	""	"1025"	"33"	"37.000"	"30.000"	"0.0266497948223427"	"16"	"9.9E-05"	"0.0006961"	"0.48"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); M1(Oxidation); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"734.04816"	"2200.12992"	"2200.13200"	"-0.95"	"-0.00070"	"13/164"	"13"	"164"	"414720.243103027"	"HCD"	"MS2"	"3.068518"	"17.4"	"100.000"	"78.4046"	"26845"	"26845"	"26822"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.8"	""	"16.7"	""	"23.0"	""	"36.2"	""	"35.7"	"35.7"	""	"1232"	"42"	"37.000"	"30.000"	"0.00348803402047564"	"17"	"0"	"4.489E-07"	"1.137"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); M1(Oxidation); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"734.04883"	"2200.13193"	"2200.13200"	"-0.03"	"-0.00002"	"13/164"	"13"	"164"	"425494.202148438"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"78.0155"	"26686"	"26686"	"26666"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.4"	""	"15.3"	""	"19.9"	""	"37.2"	""	"32.7"	"32.8"	""	"1224"	"50"	"37.000"	"30.000"	"0.000610592439059402"	"20"	"0"	"1.407E-07"	"1.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); M1(Oxidation); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.04907"	"2200.13266"	"2200.13200"	"0.30"	"0.00022"	"13/164"	"13"	"164"	"576601.020568848"	"HCD"	"MS2"	"1.792979"	"21.4"	"100.000"	"78.4532"	"26891"	"26891"	"26871"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.3"	""	"21.1"	""	"23.4"	""	"52.1"	"1.9"	"45.6"	"37.1"	""	"1231"	"35"	"37.000"	"30.000"	"0.0181229151560314"	"15"	"0"	"7.747E-07"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MDENQFVAVTSTNAAK"	"[K].mDENQFVAVTSTNAAk.[VI]"	"N-Term(TMT6plex); M1(Oxidation); K16(TMT6plex)"	"2"	"3"	"P47942; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1;Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"P47942; Q62950; Q62952"	"Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus OX=10116 GN=Dpysl2 PE=1 SV=1; Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus OX=10116 GN=Crmp1 PE=1 SV=1; Dihydropyrimidinase-related protein 3 OS=Rattus norvegicus OX=10116 GN=Dpysl3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"734.04938"	"2200.13358"	"2200.13200"	"0.72"	"0.00053"	"12/164"	"12"	"164"	"447591.038696289"	"HCD"	"MS2"	"0"	"17.3"	"100.000"	"78.1581"	"26771"	"26771"	"26751"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.0"	""	"14.6"	""	"21.6"	""	"35.6"	""	"37.3"	"30.1"	""	"1243"	"35"	"37.000"	"30.000"	"0.0200650909664441"	"15"	"0"	"8.444E-07"	"1.08"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNFEYSDPVDGSISK"	"[K].aDNFEYSDPVDGSISk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"0.9722"	"0.0000"	"1"	"1"	"1"	"734.70392"	"2202.09720"	"2202.09666"	"0.24"	"0.00018"	"13/172"	"13"	"172"	"260284.010742188"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"99.0854"	"35193"	"35193"	"35170"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"14.2"	""	"15.0"	""	"19.1"	""	"16.2"	"22.1"	""	"1076"	"36"	"37.000"	"30.000"	"0.0121557644437889"	"16"	"0"	"5.104E-05"	"0.714"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ADNFEYSDPVDGSISK"	"[K].aDNFEYSDPVDGSISk.[N]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"P38652"	"Phosphoglucomutase-1 OS=Rattus norvegicus OX=10116 GN=Pgm1 PE=1 SV=2"	"0"	"3"	"3"	"0.9692"	"0.0000"	"1"	"1"	"1"	"734.70465"	"2202.09940"	"2202.09666"	"1.24"	"0.00091"	"15/172"	"15"	"172"	"229738.043884277"	"HCD"	"MS2"	"15.09547"	"8.2"	"100.000"	"99.1811"	"35261"	"35261"	"35244"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.1"	""	"8.5"	""	"9.1"	""	"9.8"	""	"12.4"	"19.1"	""	"1093"	"65"	"37.000"	"30.000"	"1.69664181491215E-05"	"18"	"0"	"6.373E-08"	"1.311"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNYQHSDGSYSTFGDR"	"[R].qLNYQHSDGSYSTFGDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"735.34430"	"2204.01834"	"2204.02059"	"-1.02"	"-0.00075"	"16/178"	"16"	"178"	"906061.46484375"	"HCD"	"MS2"	"16.58164"	"22.3"	"100.000"	"53.8425"	"16915"	"16915"	"16894"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.5"	""	"36.1"	""	"22.5"	""	"35.6"	""	"47.9"	"27.7"	""	"538"	"45"	"34.000"	"27.000"	"0.000876500725695405"	"15"	"0"	"2.697E-06"	"0.977"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNYQHSDGSYSTFGDR"	"[R].qLNYQHSDGSYSTFGDR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"Q63041"	"Alpha-1-macroglobulin OS=Rattus norvegicus OX=10116 GN=A1m PE=1 SV=1"	"0"	"3"	"3"	"0.8478"	"0.0000"	"1"	"1"	"1"	"735.34467"	"2204.01944"	"2204.02059"	"-0.52"	"-0.00038"	"15/178"	"15"	"178"	"676944.768981934"	"HCD"	"MS2"	"14.46521"	"17.7"	"100.000"	"54.2129"	"17033"	"17033"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.6"	""	"27.0"	""	"18.7"	""	"30.5"	""	"32.5"	"27.9"	""	"543"	"47"	"34.000"	"27.000"	"0.000607812789121305"	"22"	"0"	"2.51E-06"	"0.983"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.06488"	"2206.18009"	"2206.18178"	"-0.77"	"-0.00056"	"6/194"	"6"	"194"	"699146.088317871"	"HCD"	"MS2"	"28.6518"	"19.4"	"100.000"	"70.4330"	"23614"	"23614"	"23596"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"22.9"	""	"27.1"	""	"19.5"	""	"36.6"	""	"46.1"	"33.0"	""	"1358"	"7"	"38.000"	"31.000"	"13.3005553331057"	"13"	"9.9E-05"	"0.0006116"	"0.492"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.9032"	"0.0000"	"1"	"1"	"1"	"736.06537"	"2206.18155"	"2206.18178"	"-0.10"	"-0.00008"	"11/194"	"11"	"194"	"2870291.24395752"	"HCD"	"MS2"	"3.974645"	"58.2"	"100.000"	"70.9460"	"23854"	"23854"	"23839"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"63.6"	""	"59.7"	""	"42.0"	""	"140.6"	"0.3"	"139.6"	"108.4"	""	"1374"	"31"	"38.000"	"31.000"	"0.0493124678103425"	"18"	"0"	"6.731E-06"	"0.895"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"0.9091"	"0.0000"	"1"	"1"	"1"	"736.06543"	"2206.18174"	"2206.18178"	"-0.02"	"-0.00002"	"10/194"	"10"	"194"	"861144.93347168"	"HCD"	"MS2"	"18.55963"	"23.8"	"100.000"	"70.6535"	"23737"	"23737"	"23715"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.2"	""	"25.2"	""	"20.3"	""	"56.0"	""	"51.7"	"44.8"	""	"1357"	"22"	"38.000"	"31.000"	"0.446220842645653"	"15"	"0"	"5.25E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.06555"	"2206.18210"	"2206.18178"	"0.15"	"0.00011"	"9/194"	"9"	"194"	"2158265.38586426"	"HCD"	"MS2"	"3.382676"	"47.7"	"100.000"	"70.9903"	"23840"	"23840"	"23826"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"54.3"	""	"43.3"	""	"33.7"	""	"116.8"	"1.4"	"120.4"	"84.2"	""	"1356"	"17"	"38.000"	"31.000"	"1.27417680179262"	"14"	"0"	"4.625E-05"	"0.723"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.06561"	"2206.18229"	"2206.18178"	"0.23"	"0.00017"	"10/194"	"10"	"194"	"1759779.21057129"	"HCD"	"MS2"	"3.997358"	"44.9"	"100.000"	"71.2620"	"23982"	"23982"	"23964"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"56.3"	""	"37.1"	""	"50.2"	""	"94.7"	""	"111.2"	"80.5"	""	"1358"	"26"	"38.000"	"31.000"	"0.168604737849569"	"14"	"0"	"2.273E-05"	"0.786"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.06561"	"2206.18229"	"2206.18178"	"0.23"	"0.00017"	"9/194"	"9"	"194"	"2701095.47503662"	"HCD"	"MS2"	"4.101607"	"58.8"	"100.000"	"70.7162"	"23729"	"23729"	"23712"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"85.2"	""	"70.9"	""	"45.9"	""	"115.9"	""	"137.6"	"107.1"	""	"1358"	"17"	"38.000"	"31.000"	"1.29380782749704"	"14"	"0"	"1.202E-05"	"0.843"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EEPPSLRPAPPPISGGGYR"	"[K].eEPPSLRPAPPPISGGGYR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"P14480"	"Fibrinogen beta chain OS=Rattus norvegicus OX=10116 GN=Fgb PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"736.06573"	"2206.18265"	"2206.18178"	"0.39"	"0.00029"	"11/194"	"11"	"194"	"1039678.88476563"	"HCD"	"MS2"	"20.26402"	"45.3"	"100.000"	"71.2852"	"23960"	"23960"	"23942"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.6"	""	"60.0"	""	"57.4"	""	"82.1"	"1.3"	"91.3"	"71.3"	""	"1357"	"15"	"38.000"	"31.000"	"2.15055152367501"	"13"	"0"	"8.019E-05"	"0.674"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VGLVDEVVPEDQVHSK"	"[K].vGLVDEVVPEDQVHSk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"P23965"	"Enoyl-CoA delta isomerase 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Eci1 PE=1 SV=1"	"0"	"3"	"3"	"0.7083"	"0.0000"	"1"	"1"	"1"	"736.74731"	"2208.22739"	"2208.22762"	"-0.10"	"-0.00008"	"12/148"	"12"	"148"	"468379.666320801"	"HCD"	"MS2"	"31.54012"	"21.5"	"100.000"	"94.2832"	"33284"	"33284"	"33262"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"35.1"	""	"34.7"	""	"25.7"	""	"29.2"	""	"34.0"	"46.6"	""	"1157"	"24"	"37.000"	"30.000"	"0.249633785944862"	"21"	"0"	"1.953E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"1"	"9"	"737.08508"	"2209.24070"	"2209.24299"	"-1.04"	"-0.00076"	"3/168"	"3"	"168"	"260819.340270996"	"HCD"	"MS2"	"2.983748"	"7.8"	"100.000"	"107.0731"	"38419"	"38419"	"38401"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"9.3"	""	"11.8"	""	"13.0"	""	"18.8"	"15.7"	""	"1097"	"0"	"37.000"	"30.000"	"51.5438235844703"	"13"	"0.006925"	"0.08695"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"1"	"2"	"10"	"737.08508"	"2209.24070"	"2209.24299"	"-1.04"	"-0.00076"	"3/168"	"3"	"168"	"260819.340270996"	"HCD"	"MS2"	"2.983748"	"7.8"	"100.000"	"107.0731"	"38419"	"38419"	"38401"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.5"	""	"9.3"	""	"11.8"	""	"13.0"	""	"18.8"	"15.7"	""	"1097"	"0"	"37.000"	"30.000"	"51.5438235844703"	"13"	"0.006925"	"0.08695"	"0.042"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"737.08545"	"2209.24179"	"2209.24299"	"-0.54"	"-0.00040"	"3/168"	"3"	"168"	"115047.006530762"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"107.3898"	"38522"	"38522"	"38512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	""	"4.9"	""	"5.8"	""	"5.0"	""	"7.6"	"10.8"	""	"1074"	"3"	"37.000"	"30.000"	"26.9757970573522"	"14"	"0.002328"	"0.02223"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"2"	"2"	"737.08545"	"2209.24179"	"2209.24299"	"-0.54"	"-0.00040"	"3/168"	"3"	"168"	"115047.006530762"	"HCD"	"MS2"	"0"	"3.9"	"100.000"	"107.3898"	"38522"	"38522"	"38512"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.8"	""	"4.9"	""	"5.8"	""	"5.0"	""	"7.6"	"10.8"	""	"1074"	"3"	"37.000"	"30.000"	"26.9757970573522"	"14"	"0.002328"	"0.02223"	"0.169"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"737.08600"	"2209.24344"	"2209.24299"	"0.21"	"0.00015"	"3/168"	"3"	"168"	"136978.037536621"	"HCD"	"MS2"	"5.67963"	"5.6"	"100.000"	"107.0442"	"38390"	"38390"	"38375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.7"	""	"6.9"	""	"10.0"	""	"6.8"	""	"10.6"	"13.3"	""	"1068"	"1"	"37.000"	"30.000"	"43.0072087600302"	"13"	"0.00192"	"0.01587"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"737.08600"	"2209.24344"	"2209.24299"	"0.21"	"0.00015"	"3/168"	"3"	"168"	"136978.037536621"	"HCD"	"MS2"	"5.67963"	"5.6"	"100.000"	"107.0442"	"38390"	"38390"	"38375"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.7"	""	"6.9"	""	"10.0"	""	"6.8"	""	"10.6"	"13.3"	""	"1068"	"1"	"37.000"	"30.000"	"43.0072087600302"	"13"	"0.00192"	"0.01587"	"0.2"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"2"	"12"	"737.08600"	"2209.24344"	"2209.24299"	"0.21"	"0.00015"	"3/168"	"3"	"168"	"477952.597717285"	"HCD"	"MS2"	"0"	"13.2"	"100.000"	"102.8895"	"36735"	"36735"	"36714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"17.0"	""	"15.6"	""	"21.3"	""	"20.7"	""	"30.0"	"21.5"	""	"1068"	"1"	"37.000"	"30.000"	"40.8828588090611"	"14"	"0.009125"	"0.1175"	"0.013"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"1"	"737.08606"	"2209.24363"	"2209.24299"	"0.29"	"0.00021"	"3/168"	"3"	"168"	"116984.887390137"	"HCD"	"MS2"	"8.13873"	"4.2"	"100.000"	"107.3579"	"38531"	"38531"	"38517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"3.3"	""	"4.7"	""	"9.7"	""	"7.7"	"8.3"	""	"1068"	"3"	"37.000"	"30.000"	"25.3829010653458"	"14"	"0.004852"	"0.0594"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"2"	"2"	"737.08606"	"2209.24363"	"2209.24299"	"0.29"	"0.00021"	"3/168"	"3"	"168"	"116984.887390137"	"HCD"	"MS2"	"8.13873"	"4.2"	"100.000"	"107.3579"	"38531"	"38531"	"38517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"3.3"	""	"4.7"	""	"9.7"	""	"7.7"	"8.3"	""	"1068"	"3"	"37.000"	"30.000"	"25.3829010653458"	"14"	"0.004852"	"0.0594"	"0.079"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"2"	"4"	"737.08606"	"2209.24363"	"2209.24299"	"0.29"	"0.00021"	"3/168"	"3"	"168"	"271727.367431641"	"HCD"	"MS2"	"18.29649"	"8.9"	"100.000"	"106.1426"	"38032"	"38032"	"38012"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"11.1"	""	"12.2"	""	"14.7"	""	"19.3"	"17.1"	""	"1068"	"1"	"37.000"	"30.000"	"43.7060196863978"	"13"	"0.002189"	"0.02104"	"0.174"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	""	"0.0000"	"2"	"3"	"5"	"737.08606"	"2209.24363"	"2209.24299"	"0.29"	"0.00021"	"3/168"	"3"	"168"	"271727.367431641"	"HCD"	"MS2"	"18.29649"	"8.9"	"100.000"	"106.1426"	"38032"	"38032"	"38012"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"11.1"	""	"12.2"	""	"14.7"	""	"19.3"	"17.1"	""	"1068"	"1"	"37.000"	"30.000"	"43.7060196863978"	"13"	"0.007412"	"0.0937"	"0.035"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"5"	"737.08612"	"2209.24381"	"2209.24299"	"0.37"	"0.00027"	"3/168"	"3"	"168"	"388156.538330078"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"106.5023"	"38193"	"38193"	"38183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"15.4"	""	"14.5"	""	"16.1"	""	"20.2"	"23.1"	""	"1069"	"2"	"37.000"	"30.000"	"36.1366350347014"	"13"	"0.002875"	"0.03083"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"6"	"737.08612"	"2209.24381"	"2209.24299"	"0.37"	"0.00027"	"3/168"	"3"	"168"	"388156.538330078"	"HCD"	"MS2"	"0"	"10.6"	"100.000"	"106.5023"	"38193"	"38193"	"38183"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.6"	""	"15.4"	""	"14.5"	""	"16.1"	""	"20.2"	"23.1"	""	"1069"	"2"	"37.000"	"30.000"	"36.1366350347014"	"13"	"0.002875"	"0.03083"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTQLDqPAAIAVNPk.[L]"	"Q9(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"5"	"737.08618"	"2209.24399"	"2209.24299"	"0.46"	"0.00034"	"3/168"	"3"	"168"	"266678.764343262"	"HCD"	"MS2"	"2.738315"	"8.7"	"100.000"	"106.7552"	"38275"	"38275"	"38253"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"9.7"	""	"9.2"	""	"14.7"	""	"18.0"	"18.9"	""	"1069"	"2"	"37.000"	"30.000"	"33.802413456059"	"14"	"0.002875"	"0.03084"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"WLITTQLDQPAAIAVNPK"	"[K].WLITTqLDQPAAIAVNPk.[L]"	"Q6(Deamidated); K18(TMT6plex)"	"1"	"1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"P98158"	"Low-density lipoprotein receptor-related protein 2 OS=Rattus norvegicus OX=10116 GN=Lrp2 PE=1 SV=1"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"2"	"6"	"737.08618"	"2209.24399"	"2209.24299"	"0.46"	"0.00034"	"3/168"	"3"	"168"	"266678.764343262"	"HCD"	"MS2"	"2.738315"	"8.7"	"100.000"	"106.7552"	"38275"	"38275"	"38253"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.5"	""	"9.7"	""	"9.2"	""	"14.7"	""	"18.0"	"18.9"	""	"1069"	"2"	"37.000"	"30.000"	"33.802413456059"	"14"	"0.002875"	"0.03084"	"0.139"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGNQAAYEHFETMK"	"[R].nPGNQAAYEHFETmk.[N]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.9750"	"0.0000"	"1"	"1"	"1"	"737.70087"	"2211.08805"	"2211.09047"	"-1.10"	"-0.00081"	"15/148"	"15"	"148"	"629841.352783203"	"HCD"	"MS2"	"7.64239"	"29.4"	"100.000"	"54.2174"	"17035"	"17035"	"17009"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.1"	""	"30.1"	""	"30.7"	""	"63.7"	"0.6"	"65.9"	"55.3"	""	"1024"	"40"	"37.000"	"30.000"	"0.00517928680581067"	"16"	"0"	"2.278E-06"	"0.992"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGNQAAYEHFETMK"	"[R].nPGNQAAYEHFETmk.[N]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8537"	"0.0000"	"1"	"1"	"1"	"737.70111"	"2211.08878"	"2211.09047"	"-0.77"	"-0.00056"	"13/148"	"13"	"148"	"683694.505615234"	"HCD"	"MS2"	"6.227474"	"28.8"	"100.000"	"54.0311"	"16992"	"16992"	"16968"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"33.1"	""	"28.1"	""	"26.1"	""	"69.3"	""	"57.7"	"59.0"	""	"1025"	"41"	"37.000"	"30.000"	"0.00371273429538433"	"21"	"0"	"2.595E-05"	"0.774"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPGNQAAYEHFETMK"	"[R].nPGNQAAYEHFETmk.[N]"	"N-Term(TMT6plex); M14(Oxidation); K15(TMT6plex)"	"1"	"1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"P85972"	"Vinculin OS=Rattus norvegicus OX=10116 GN=Vcl PE=1 SV=1"	"0"	"3"	"3"	"0.8919"	"0.0000"	"1"	"1"	"1"	"737.70215"	"2211.09189"	"2211.09047"	"0.64"	"0.00047"	"13/148"	"13"	"148"	"428631.601318359"	"HCD"	"MS2"	"7.672639"	"21.9"	"100.000"	"54.5417"	"17167"	"17167"	"17142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.9"	""	"31.9"	""	"23.5"	""	"41.3"	""	"43.9"	"45.4"	""	"1048"	"37"	"37.000"	"30.000"	"0.0105034334233934"	"18"	"0"	"5.292E-05"	"0.711"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKTEDELLETSLK"	"[R].qkTEDELLETSLk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"1"	"3"	"3"	"0.7600"	"0.0000"	"1"	"1"	"1"	"741.10144"	"2221.28977"	"2221.28944"	"0.15"	"0.00011"	"15/136"	"15"	"136"	"955595.513366699"	"HCD"	"MS2"	"3.137142"	"58.3"	"100.000"	"91.5178"	"32133"	"32133"	"32116"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"82.8"	""	"59.5"	""	"51.9"	""	"129.3"	""	"106.9"	"123.0"	""	"766"	"25"	"35.000"	"28.000"	"0.116198032354641"	"20"	"0"	"3.933E-05"	"0.737"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QKTEDELLETSLK"	"[R].qkTEDELLETSLk.[L]"	"N-Term(TMT6plex); K2(TMT6plex); K13(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"1"	"3"	"3"	"0.7714"	"0.0000"	"1"	"1"	"1"	"741.10168"	"2221.29050"	"2221.28944"	"0.48"	"0.00035"	"8/136"	"8"	"136"	"675997.462341309"	"HCD"	"MS2"	"11.13499"	"39.2"	"100.000"	"91.3785"	"32112"	"32112"	"32099"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"62.7"	""	"44.9"	""	"42.8"	""	"82.7"	"0.1"	"66.3"	"71.2"	""	"767"	"35"	"35.000"	"28.000"	"0.0122113974958197"	"23"	"0"	"4.958E-05"	"0.716"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQYAPERPGPQPTAETTR"	"[K].vQYAPERPGPQPTAETTR.[Q]"	"N-Term(TMT6plex)"	"1"	"1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"P29066"	"Beta-arrestin-1 OS=Rattus norvegicus OX=10116 GN=Arrb1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.06177"	"2227.17075"	"2227.16686"	"1.75"	"0.00130"	"9/190"	"9"	"190"	"580806.076477051"	"HCD"	"MS2"	"0"	"23.4"	"100.000"	"42.2352"	"12166"	"12166"	"12136"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.6"	""	"35.2"	""	"34.0"	""	"36.4"	""	"41.3"	"43.7"	""	"1349"	"9"	"38.000"	"31.000"	"9.48379055025626"	"13"	"0.0001686"	"0.001699"	"0.401"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AALAHSEEIATSQAAATK"	"[R].aALAHSEEIATSQAAATk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"P30427"	"Plectin OS=Rattus norvegicus OX=10116 GN=Plec PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"743.41583"	"2228.23294"	"2228.22868"	"1.91"	"0.00142"	"12/168"	"12"	"168"	"429443.309265137"	"HCD"	"MS2"	"0"	"17.8"	"100.000"	"63.1319"	"20684"	"20684"	"20662"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.9"	""	"22.1"	""	"19.7"	""	"28.6"	""	"33.3"	"43.4"	""	"1115"	"30"	"37.000"	"30.000"	"0.0544809750682864"	"14"	"0"	"1.481E-05"	"0.824"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSHFNPDPDAETLYK"	"[K].gSSHFNPDPDAETLYk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.04700"	"2236.12644"	"2236.12863"	"-0.98"	"-0.00073"	"11/162"	"11"	"162"	"550352.902770996"	"HCD"	"MS2"	"7.201656"	"26.1"	"100.000"	"73.0857"	"24719"	"24719"	"24696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"42.6"	""	"25.8"	""	"29.0"	""	"54.0"	""	"45.1"	"53.0"	""	"1187"	"30"	"37.000"	"30.000"	"0.0630116313197444"	"14"	"0"	"7.319E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GSSHFNPDPDAETLYK"	"[K].gSSHFNPDPDAETLYk.[A]"	"N-Term(TMT6plex); K16(TMT6plex)"	"1"	"1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"Q4FZU6"	"Annexin A8 OS=Rattus norvegicus OX=10116 GN=Anxa8 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.04761"	"2236.12827"	"2236.12863"	"-0.16"	"-0.00012"	"12/162"	"12"	"162"	"697383.107299805"	"HCD"	"MS2"	"7.955024"	"27.8"	"100.000"	"72.9760"	"24645"	"24645"	"24618"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"45.1"	""	"28.7"	""	"33.5"	""	"51.0"	""	"54.0"	"53.0"	""	"1188"	"43"	"37.000"	"30.000"	"0.00309589658396418"	"15"	"0"	"2.879E-06"	"0.971"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72473"	"2238.15964"	"2238.16038"	"-0.33"	"-0.00025"	"16/164"	"16"	"164"	"717236.125915527"	"HCD"	"MS2"	"0.7947687"	"8.2"	"100.000"	"100.9103"	"35934"	"35934"	"35915"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.8"	""	"8.5"	""	"13.3"	""	"12.6"	""	"14.1"	"17.6"	""	"1288"	"25"	"38.000"	"31.000"	"0.202714991428125"	"14"	"0"	"1.611E-05"	"0.817"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72516"	"2238.16092"	"2238.16038"	"0.24"	"0.00018"	"5/164"	"5"	"164"	"395184.994567871"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"100.7266"	"35888"	"35888"	"35862"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.7"	""	"4.1"	""	"9.1"	""	"10.9"	""	"7.8"	"11.6"	""	"1276"	"22"	"38.000"	"31.000"	"0.420552945165877"	"14"	"0"	"4.119E-05"	"0.733"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72516"	"2238.16092"	"2238.16038"	"0.24"	"0.00018"	"15/164"	"15"	"164"	"662393.259094238"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"100.6078"	"35812"	"35812"	"35787"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.4"	""	"7.6"	""	"8.8"	""	"11.9"	""	"16.6"	"17.5"	""	"1276"	"36"	"38.000"	"31.000"	"0.0174510144738368"	"15"	"0"	"3.708E-06"	"0.948"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LFDHPEVPIPAESESVSR"	"[K].lFDHPEVPIPAESESVSR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"P12785"	"Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"746.72577"	"2238.16275"	"2238.16038"	"1.06"	"0.00079"	"5/164"	"5"	"164"	"927778.643127441"	"HCD"	"MS2"	"0"	"9.1"	"100.000"	"101.0153"	"36004"	"36004"	"35988"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.3"	""	"11.6"	""	"11.8"	""	"14.8"	""	"17.1"	"17.5"	""	"1308"	"23"	"38.000"	"31.000"	"0.310869237766595"	"14"	"0"	"7.407E-06"	"0.886"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPYQGPDAAPGALDYK"	"[R].mAPYQGPDAAPGALDYk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"747.05414"	"2239.14786"	"2239.14693"	"0.42"	"0.00031"	"12/166"	"12"	"166"	"512116.527832031"	"HCD"	"MS2"	"12.62517"	"19.9"	"100.000"	"91.0505"	"31980"	"31980"	"31967"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"23.1"	""	"26.7"	""	"25.0"	""	"38.9"	""	"40.3"	"36.0"	""	"1233"	"25"	"37.000"	"30.000"	"0.202270748204238"	"21"	"9.9E-05"	"0.0005208"	"0.506"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPYQGPDAAPGALDYK"	"[R].mAPYQGPDAAPGALDYk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8649"	"0.0000"	"1"	"1"	"1"	"747.05414"	"2239.14786"	"2239.14693"	"0.42"	"0.00031"	"12/166"	"12"	"166"	"568993.111999512"	"HCD"	"MS2"	"10.45197"	"20.1"	"100.000"	"91.1899"	"31999"	"31999"	"31982"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"30.6"	""	"30.9"	""	"21.1"	""	"30.9"	""	"39.4"	"38.9"	""	"1233"	"37"	"37.000"	"30.000"	"0.0119105846744093"	"20"	"0"	"6.199E-06"	"0.902"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPYQGPDAAPGALDYK"	"[R].mAPYQGPDAAPGALDYk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.8571"	"0.0000"	"1"	"1"	"1"	"747.05414"	"2239.14786"	"2239.14693"	"0.42"	"0.00031"	"14/166"	"14"	"166"	"992803.586975098"	"HCD"	"MS2"	"0"	"29.9"	"100.000"	"91.4830"	"32118"	"32118"	"32105"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"37.0"	""	"40.9"	""	"33.7"	""	"49.0"	""	"62.5"	"63.5"	""	"1233"	"42"	"37.000"	"30.000"	"0.00350697831865228"	"21"	"0"	"1.883E-06"	"1.009"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MAPYQGPDAAPGALDYK"	"[R].mAPYQGPDAAPGALDYk.[S]"	"N-Term(TMT6plex); M1(Oxidation); K17(TMT6plex)"	"1"	"1"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"Q9QXQ0"	"Alpha-actinin-4 OS=Rattus norvegicus OX=10116 GN=Actn4 PE=1 SV=2"	"0"	"3"	"3"	"0.9756"	"0.0000"	"1"	"1"	"1"	"747.05426"	"2239.14823"	"2239.14693"	"0.58"	"0.00043"	"14/166"	"14"	"166"	"1097069.65338135"	"HCD"	"MS2"	"1.66103"	"31.5"	"100.000"	"91.3718"	"32110"	"32110"	"32099"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"39.7"	""	"38.7"	""	"44.2"	""	"44.2"	""	"67.7"	"67.4"	""	"1250"	"41"	"37.000"	"30.000"	"0.00509190177513025"	"16"	"0"	"5.899E-06"	"0.907"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPMEEAPk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.7391"	"0.0000"	"1"	"1"	"1"	"748.04980"	"2242.13486"	"2242.13536"	"-0.22"	"-0.00017"	"14/132"	"14"	"132"	"757411.648742676"	"HCD"	"MS2"	"0"	"22.6"	"100.000"	"111.4922"	"40127"	"40127"	"40108"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"37.5"	""	"24.1"	""	"34.1"	""	"25.0"	""	"45.2"	"50.2"	""	"1211"	"46"	"37.000"	"30.000"	"0.0014524933324663"	"27"	"0"	"5.216E-06"	"0.918"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPMEEAPk.[G]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.8378"	"0.0000"	"1"	"1"	"1"	"748.04999"	"2242.13541"	"2242.13536"	"0.02"	"0.00002"	"14/132"	"14"	"132"	"476282.43371582"	"HCD"	"MS2"	"0"	"16.0"	"100.000"	"111.4372"	"40091"	"40091"	"40071"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.8"	""	"20.3"	""	"27.4"	""	"18.6"	""	"30.8"	"31.6"	""	"1208"	"37"	"37.000"	"30.000"	"0.0115355136817401"	"21"	"0"	"2.44E-06"	"0.986"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ILATPPQEDAPSVDIANIR"	"[K].iLATPPQEDAPSVDIANIR.[M]"	"N-Term(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.41620"	"2249.23404"	"2249.23388"	"0.07"	"0.00006"	"6/188"	"6"	"188"	"141675.261962891"	"HCD"	"MS2"	"15.85865"	"6.7"	"100.000"	"111.1828"	"39988"	"39988"	"39959"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.3"	""	"12.1"	""	"13.8"	""	"7.1"	""	"11.3"	"10.0"	""	"1181"	"3"	"37.000"	"30.000"	"26.7436020933088"	"13"	"0.003818"	"0.04124"	"0.113"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IVAERPGTNSTGPGPMAPPR"	"[K].iVAERPGTNSTGPGPmAPPR.[A]"	"N-Term(TMT6plex); M16(Oxidation)"	"1"	"1"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"O08629"	"Transcription intermediary factor 1-beta OS=Rattus norvegicus OX=10116 GN=Trim28 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"750.73279"	"2250.18381"	"2250.18622"	"-1.07"	"-0.00080"	"15/196"	"15"	"196"	"599972.361755371"	"HCD"	"MS2"	"0"	"19.0"	"100.000"	"43.2263"	"12570"	"12570"	"12546"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"31.8"	""	"15.5"	""	"27.9"	""	"39.0"	"0.8"	"35.1"	"29.6"	""	"1329"	"15"	"38.000"	"31.000"	"1.9430992550769"	"13"	"0.0001991"	"0.004037"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"0.9808"	"0.0000"	"1"	"1"	"1"	"564.29645"	"2254.16396"	"2254.16653"	"-1.14"	"-0.00064"	"17/194"	"17"	"194"	"656843.215698242"	"HCD"	"MS2"	"22.25375"	"8.3"	"100.000"	"85.7913"	"29863"	"29863"	"29846"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"13.4"	""	"12.9"	""	"15.7"	""	"13.5"	"12.1"	""	"1291"	"52"	"38.000"	"31.000"	"0.000385386277489866"	"17"	"0"	"1.195E-06"	"1.049"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.05963"	"2254.16434"	"2254.16653"	"-0.97"	"-0.00073"	"12/194"	"12"	"194"	"407276.997009277"	"HCD"	"MS2"	"11.86868"	"10.5"	"100.000"	"86.4119"	"30082"	"30082"	"30063"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.7"	""	"14.7"	""	"12.5"	""	"18.6"	""	"19.2"	"21.4"	""	"1287"	"21"	"38.000"	"31.000"	"0.506463965668796"	"14"	"0"	"0.0001403"	"0.623"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"0.9583"	"0.0000"	"1"	"1"	"1"	"564.29657"	"2254.16445"	"2254.16653"	"-0.92"	"-0.00052"	"17/194"	"17"	"194"	"480907.510131836"	"HCD"	"MS2"	"8.989662"	"7.2"	"100.000"	"86.0870"	"29953"	"29953"	"29937"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.8"	""	"9.5"	""	"9.2"	""	"12.4"	""	"8.7"	"17.9"	""	"1290"	"48"	"38.000"	"31.000"	"0.000985280107563557"	"17"	"0"	"2.966E-06"	"0.968"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06000"	"2254.16544"	"2254.16653"	"-0.48"	"-0.00036"	"22/194"	"22"	"194"	"3045048.11645508"	"HCD"	"MS2"	"0"	"22.5"	"100.000"	"86.1216"	"29966"	"29966"	"29957"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"32.2"	""	"30.7"	""	"34.6"	""	"37.1"	""	"40.3"	"39.6"	""	"1286"	"67"	"38.000"	"31.000"	"1.43288380098081E-05"	"17"	"0"	"1.49E-08"	"1.441"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"564.29694"	"2254.16591"	"2254.16653"	"-0.27"	"-0.00015"	"17/194"	"17"	"194"	"513536.515075684"	"HCD"	"MS2"	"57.70084"	"8.4"	"100.000"	"85.7825"	"29831"	"29831"	"29808"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"12.0"	""	"12.9"	""	"12.5"	""	"16.1"	"15.2"	""	"1281"	"57"	"38.000"	"31.000"	"0.000117630280891462"	"16"	"0"	"1.026E-07"	"1.269"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06049"	"2254.16690"	"2254.16653"	"0.17"	"0.00013"	"23/194"	"23"	"194"	"2396897.92749023"	"HCD"	"MS2"	"0"	"18.8"	"100.000"	"86.1166"	"29996"	"29996"	"29983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"30.5"	""	"25.4"	""	"30.2"	""	"23.1"	""	"35.0"	"35.3"	""	"1276"	"62"	"38.000"	"31.000"	"4.21522419828847E-05"	"16"	"0"	"4.185E-08"	"1.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06055"	"2254.16709"	"2254.16653"	"0.25"	"0.00019"	"21/194"	"21"	"194"	"5215039.23028564"	"HCD"	"MS2"	"0"	"30.6"	"100.000"	"85.8429"	"29855"	"29855"	"29844"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"55.4"	""	"46.3"	""	"50.6"	""	"44.8"	""	"46.2"	"47.3"	""	"1275"	"59"	"38.000"	"31.000"	"8.86094802398514E-05"	"16"	"0"	"4.952E-08"	"1.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06061"	"2254.16727"	"2254.16653"	"0.33"	"0.00025"	"21/194"	"21"	"194"	"5318389.91967773"	"HCD"	"MS2"	"0"	"34.3"	"100.000"	"85.8123"	"29872"	"29872"	"29861"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"58.5"	""	"59.7"	""	"51.6"	""	"42.5"	""	"57.2"	"56.5"	""	"1274"	"64"	"38.000"	"31.000"	"2.62506119664999E-05"	"16"	"0"	"4.168E-08"	"1.349"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06097"	"2254.16837"	"2254.16653"	"0.82"	"0.00061"	"12/194"	"12"	"194"	"495640.64251709"	"HCD"	"MS2"	"0"	"8.2"	"100.000"	"85.5683"	"29745"	"29745"	"29719"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.1"	""	"12.7"	""	"11.8"	""	"10.6"	""	"14.0"	"14.9"	""	"1275"	"47"	"38.000"	"31.000"	"0.00117349215093646"	"15"	"0"	"4.744E-06"	"0.926"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"4"	"4"	"0.9444"	"0.0000"	"1"	"1"	"1"	"564.29755"	"2254.16836"	"2254.16653"	"0.81"	"0.00046"	"11/194"	"11"	"194"	"428888.75390625"	"HCD"	"MS2"	"5.886784"	"8.7"	"100.000"	"86.1325"	"30002"	"30002"	"29983"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.8"	""	"10.4"	""	"10.5"	""	"12.7"	"1.5"	"19.6"	"18.1"	""	"1275"	"18"	"38.000"	"31.000"	"1.05798665349145"	"14"	"9.9E-05"	"0.0004098"	"0.528"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YLGTQPEPDAVGLDSGHIR"	"[R].yLGTQPEPDAVGLDSGHIR.[G]"	"N-Term(TMT6plex)"	"1"	"1"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"P24329"	"Thiosulfate sulfurtransferase OS=Rattus norvegicus OX=10116 GN=Tst PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"752.06134"	"2254.16947"	"2254.16653"	"1.31"	"0.00098"	"9/194"	"9"	"194"	"514852.602478027"	"HCD"	"MS2"	"10.61456"	"8.9"	"100.000"	"85.5468"	"29765"	"29765"	"29753"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.5"	""	"10.0"	""	"14.6"	""	"11.6"	""	"17.9"	"17.4"	""	"1288"	"39"	"38.000"	"31.000"	"0.00854842030777951"	"15"	"0"	"1.952E-05"	"0.8"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.8438"	"0.0000"	"1"	"1"	"1"	"753.38110"	"2258.12876"	"2258.13027"	"-0.67"	"-0.00051"	"14/132"	"14"	"132"	"605184.001098633"	"HCD"	"MS2"	"10.04688"	"15.3"	"100.000"	"103.2084"	"36861"	"36861"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.2"	""	"14.7"	""	"16.0"	""	"40.3"	""	"28.8"	"27.6"	""	"1154"	"32"	"37.000"	"30.000"	"0.034211791228266"	"19"	"0"	"5.99E-05"	"0.7"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"4"	"4"	"0.9167"	"0.0000"	"1"	"1"	"1"	"565.28784"	"2258.12954"	"2258.13027"	"-0.33"	"-0.00018"	"5/132"	"5"	"132"	"208847.923400879"	"HCD"	"MS2"	"0"	"7.7"	"100.000"	"103.3336"	"36912"	"36912"	"36883"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.4"	""	"8.8"	""	"12.6"	""	"12.0"	""	"15.6"	"10.5"	""	"1149"	"12"	"37.000"	"30.000"	"4.05779434924072"	"15"	"0.001261"	"0.009931"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AEEYEFLTPMEEAPK"	"[R].aEEYEFLTPmEEAPk.[G]"	"N-Term(TMT6plex); M10(Oxidation); K15(TMT6plex)"	"1"	"1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"Q5XI73"	"Rho GDP-dissociation inhibitor 1 OS=Rattus norvegicus OX=10116 GN=Arhgdia PE=1 SV=1"	"0"	"3"	"3"	"0.8723"	"0.0000"	"1"	"1"	"1"	"753.38226"	"2258.13224"	"2258.13027"	"0.87"	"0.00065"	"11/132"	"11"	"132"	"288657.223144531"	"HCD"	"MS2"	"0"	"8.3"	"100.000"	"103.3801"	"36947"	"36947"	"36927"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.4"	""	"7.8"	""	"9.0"	""	"19.6"	"1.4"	"14.6"	"14.1"	""	"1166"	"47"	"37.000"	"30.000"	"0.00114463904139542"	"22"	"0"	"6.801E-05"	"0.688"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINNYPGFNPSVDAEAIR"	"[R].gTINNYPGFNPSVDAEAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9623"	"0.0000"	"1"	"1"	"1"	"755.38763"	"2264.14835"	"2264.15088"	"-1.12"	"-0.00084"	"18/202"	"18"	"202"	"646840.924865723"	"HCD"	"MS2"	"0"	"6.5"	"100.000"	"103.6243"	"37045"	"37045"	"37024"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"10.2"	""	"7.9"	""	"9.6"	""	"10.5"	"14.6"	""	"1282"	"53"	"38.000"	"31.000"	"0.000344237381473332"	"18"	"0"	"1.232E-06"	"1.047"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINNYPGFNPSVDAEAIR"	"[R].gTINNYPGFNPSVDAEAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1132.57861"	"2264.14995"	"2264.15088"	"-0.41"	"-0.00046"	"10/202"	"10"	"202"	"121191.155822754"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"103.7105"	"37080"	"37080"	"37054"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.1"	""	"10.6"	""	"6.4"	""	"8.1"	""	"9.9"	"9.1"	""	"1286"	"26"	"38.000"	"31.000"	"0.156751235621111"	"14"	"0"	"5.862E-05"	"0.702"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINNYPGFNPSVDAEAIR"	"[R].gTINNYPGFNPSVDAEAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9365"	"0.0000"	"1"	"1"	"1"	"755.38831"	"2264.15036"	"2264.15088"	"-0.23"	"-0.00017"	"19/202"	"19"	"202"	"554441.425476074"	"HCD"	"MS2"	"0"	"5.9"	"100.000"	"103.6621"	"37044"	"37044"	"37026"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.6"	""	"10.7"	""	"9.1"	""	"11.4"	""	"9.5"	"9.7"	""	"1292"	"63"	"38.000"	"31.000"	"3.48523862144772E-05"	"20"	"0"	"1.455E-07"	"1.238"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINNYPGFNPSVDAEAIR"	"[R].gTINNYPGFNPSVDAEAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"2"	"2"	"1.0000"	"0.0000"	"1"	"1"	"1"	"1132.57910"	"2264.15093"	"2264.15088"	"0.02"	"0.00003"	"6/202"	"6"	"202"	"139678.411804199"	"HCD"	"MS2"	"0"	"6.1"	"100.000"	"103.4081"	"36942"	"36942"	"36914"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.5"	""	"7.2"	""	"11.8"	""	"9.1"	""	"11.4"	"8.7"	""	"1296"	"19"	"38.000"	"31.000"	"0.882216154237936"	"14"	"0"	"9.949E-05"	"0.654"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINNYPGFNPSVDAEAIR"	"[R].gTINNYPGFNPSVDAEAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"755.38855"	"2264.15110"	"2264.15088"	"0.10"	"0.00007"	"19/202"	"19"	"202"	"1004736.40014648"	"HCD"	"MS2"	"0"	"8.4"	"100.000"	"103.3452"	"36916"	"36916"	"36898"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.8"	""	"13.0"	""	"7.8"	""	"13.1"	""	"18.7"	"14.8"	""	"1300"	"59"	"38.000"	"31.000"	"9.0346921028868E-05"	"16"	"0"	"5.46E-07"	"1.119"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GTINNYPGFNPSVDAEAIR"	"[R].gTINNYPGFNPSVDAEAIR.[K]"	"N-Term(TMT6plex)"	"1"	"1"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"P14669"	"Annexin A3 OS=Rattus norvegicus OX=10116 GN=Anxa3 PE=1 SV=4"	"0"	"3"	"3"	"0.9483"	"0.0000"	"1"	"1"	"1"	"755.38867"	"2264.15146"	"2264.15088"	"0.26"	"0.00020"	"18/202"	"18"	"202"	"725758.714782715"	"HCD"	"MS2"	"0"	"7.1"	"100.000"	"103.9298"	"37169"	"37169"	"37150"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.8"	""	"10.0"	""	"7.5"	""	"12.2"	""	"15.3"	"14.3"	""	"1301"	"58"	"38.000"	"31.000"	"9.40258570870226E-05"	"19"	"0"	"6.455E-07"	"1.104"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSDGIVAPGYEEEALK"	"[R].eVSDGIVAPGYEEEALk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.9216"	"0.0000"	"1"	"1"	"1"	"755.40656"	"2264.20511"	"2264.20621"	"-0.49"	"-0.00037"	"15/154"	"15"	"154"	"265991.764831543"	"HCD"	"MS2"	"19.94275"	"7.0"	"100.000"	"104.2069"	"37281"	"37281"	"37258"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"11.3"	""	"9.3"	""	"9.4"	""	"12.8"	"11.6"	""	"1414"	"51"	"38.000"	"31.000"	"0.00062003958054855"	"20"	"0"	"9.195E-07"	"1.073"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EVSDGIVAPGYEEEALK"	"[R].eVSDGIVAPGYEEEALk.[I]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"O35567"	"Bifunctional purine biosynthesis protein PURH OS=Rattus norvegicus OX=10116 GN=Atic PE=1 SV=2"	"0"	"3"	"3"	"0.8936"	"0.0000"	"1"	"1"	"1"	"755.40729"	"2264.20731"	"2264.20621"	"0.48"	"0.00037"	"15/154"	"15"	"154"	"302529.9609375"	"HCD"	"MS2"	"40.06104"	"9.0"	"100.000"	"103.8723"	"37129"	"37129"	"37106"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"16.7"	""	"14.1"	""	"13.3"	""	"12.5"	""	"15.1"	"14.0"	""	"1395"	"47"	"38.000"	"31.000"	"0.0012839384710246"	"20"	"0"	"1.917E-07"	"1.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPDHFSPENVNDTAK"	"[R].gALPDHFSPENVNDTAk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.39789"	"2270.17911"	"2270.18173"	"-1.15"	"-0.00087"	"8/160"	"8"	"160"	"149427.589416504"	"HCD"	"MS2"	"0"	"7.0"	"100.000"	"76.0825"	"25907"	"25907"	"25877"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.0"	""	"6.5"	""	"8.6"	""	"10.1"	""	"15.0"	"16.3"	""	"1273"	"13"	"38.000"	"31.000"	"3.24189099427905"	"13"	"0.0009352"	"0.007956"	"0.262"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GALPDHFSPENVNDTAK"	"[R].gALPDHFSPENVNDTAk.[E]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"Q5XI83"	"UPF0505 protein C16orf62 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"757.39825"	"2270.18021"	"2270.18173"	"-0.67"	"-0.00051"	"10/160"	"10"	"160"	"136859.72467041"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"76.2176"	"25993"	"25993"	"25973"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"11.3"	""	"5.6"	""	"12.3"	""	"17.1"	"21.8"	""	"1277"	"21"	"38.000"	"31.000"	"0.457257567420938"	"14"	"9.9E-05"	"0.000711"	"0.478"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPDQSAVPNTPPSTPVK"	"[K].sPPDQSAVPNTPPSTPVk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.75281"	"2277.24387"	"2277.24908"	"-2.29"	"-0.00174"	"10/190"	"10"	"190"	"201896.153137207"	"HCD"	"MS2"	"0"	"8.6"	"100.000"	"68.8171"	"22991"	"22991"	"22970"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.1"	""	"10.3"	""	"7.3"	""	"17.3"	""	"17.0"	"15.9"	""	"1290"	"14"	"38.000"	"31.000"	"2.84157886961727"	"13"	"0"	"0.0002995"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SPPDQSAVPNTPPSTPVK"	"[K].sPPDQSAVPNTPPSTPVk.[L]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"Q63028"	"Alpha-adducin OS=Rattus norvegicus OX=10116 GN=Add1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"759.75317"	"2277.24497"	"2277.24908"	"-1.81"	"-0.00137"	"10/190"	"10"	"190"	"279502.73223877"	"HCD"	"MS2"	"0"	"9.9"	"100.000"	"68.7443"	"22928"	"22928"	"22909"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"9.3"	""	"14.2"	""	"15.2"	""	"21.3"	"19.5"	""	"1306"	"19"	"38.000"	"31.000"	"0.843166185669638"	"14"	"0"	"0.0002964"	"0.557"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DGPNALTPPPTTPEWVK"	"[R].dGPNALTPPPTTPEWVk.[F]"	"N-Term(TMT6plex); K17(TMT6plex)"	"2"	"3"	"P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1;Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"P06687; P06685; P06686"	"Sodium/potassium-transporting ATPase subunit alpha-3 OS=Rattus norvegicus OX=10116 GN=Atp1a3 PE=1 SV=2; Sodium/potassium-transporting ATPase subunit alpha-1 OS=Rattus norvegicus OX=10116 GN=Atp1a1 PE=1 SV=1; Sodium/potassium-transporting ATPase subunit alpha-2 OS=Rattus norvegicus OX=10116 GN=Atp1a2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.08771"	"2278.24857"	"2278.24835"	"0.09"	"0.00007"	"6/180"	"6"	"180"	"116175.575073242"	"HCD"	"MS2"	"14.96298"	"4.7"	"100.000"	"107.0142"	"38378"	"38378"	"38366"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.7"	""	"6.7"	""	"2.3"	""	"9.5"	""	"10.1"	"11.6"	""	"1233"	"26"	"37.000"	"30.000"	"0.149256440731285"	"14"	"0"	"0.0001795"	"0.601"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQNHLPASGPPQPPAVSPTR"	"[R].vQnHLPASGPPQPPAVSPTR.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"0"	"3"	"3"	"0.2381"	"0.0000"	"1"	"1"	"1"	"760.74756"	"2280.22812"	"2280.22980"	"-0.73"	"-0.00056"	"8/210"	"8"	"210"	"163102.132568359"	"HCD"	"MS2"	"0"	"5.3"	"100.000"	"65.6728"	"21684"	"21684"	"21659"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.1"	""	"7.6"	""	"6.8"	""	"6.9"	"2.2"	"11.2"	"7.8"	""	"1274"	"21"	"38.000"	"31.000"	"0.459345464239507"	"20"	"0"	"0.0001393"	"0.624"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VQNHLPASGPPQPPAVSPTR"	"[R].vQnHLPASGPPQPPAVSPTR.[E]"	"N-Term(TMT6plex); N3(Deamidated)"	"1"	"1"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"Q99PD6"	"Transforming growth factor beta-1-induced transcript 1 protein OS=Rattus norvegicus OX=10116 GN=Tgfb1i1 PE=1 SV=2"	"0"	"3"	"3"	"0.2632"	"0.0000"	"1"	"1"	"1"	"760.74756"	"2280.22812"	"2280.22980"	"-0.73"	"-0.00056"	"8/210"	"8"	"210"	"167021.718139648"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"65.6833"	"21722"	"21722"	"21696"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.6"	""	"6.0"	""	"8.4"	""	"7.2"	""	"8.8"	"10.5"	""	"1274"	"19"	"38.000"	"31.000"	"0.716373368416932"	"14"	"0"	"1.294E-05"	"0.836"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KTQEQLASEMAELTAR"	"[K].kTQEQLASEmAELTAR.[V]"	"N-Term(TMT6plex); K1(TMT6plex); M10(Oxidation)"	"1"	"1"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"O35763"	"Moesin OS=Rattus norvegicus OX=10116 GN=Msn PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"760.74841"	"2280.23069"	"2280.22697"	"1.63"	"0.00124"	"13/174"	"13"	"174"	"232654.131408691"	"HCD"	"MS2"	"18.31129"	"11.6"	"100.000"	"58.4433"	"18748"	"18748"	"18718"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.9"	""	"8.7"	""	"12.8"	""	"32.9"	""	"25.0"	"17.1"	""	"1294"	"18"	"38.000"	"31.000"	"0.992897187871144"	"14"	"0.0001686"	"0.001837"	"0.394"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATNPPIIQEEKPK"	"[R].eATNPPIIQEEkPk.[K]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.11981"	"2281.34488"	"2281.33706"	"3.43"	"0.00261"	"15/144"	"15"	"144"	"1334547.77612305"	"HCD"	"MS2"	"20.75457"	"76.3"	"100.000"	"63.8966"	"20963"	"20963"	"20946"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"132.9"	""	"76.6"	""	"90.9"	""	"132.1"	"1.6"	"147.1"	"141.7"	""	"523"	"40"	"34.000"	"27.000"	"0.00290049214191118"	"15"	"0"	"6.242E-07"	"1.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATNPPIIQEEKPK"	"[R].eATNPPIIQEEkPk.[K]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.12024"	"2281.34616"	"2281.33706"	"3.99"	"0.00304"	"14/144"	"14"	"144"	"1275420.16314697"	"HCD"	"MS2"	"21.49868"	"74.2"	"100.000"	"63.9114"	"21001"	"21001"	"20979"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"122.5"	""	"74.0"	""	"81.5"	""	"125.3"	"1.9"	"153.2"	"145.2"	""	"513"	"42"	"34.000"	"27.000"	"0.00153492574132972"	"15"	"0"	"1.38E-06"	"1.037"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATNPPIIQEEKPK"	"[R].eATNPPIIQEEkPk.[K]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.12097"	"2281.34836"	"2281.33706"	"4.95"	"0.00377"	"11/144"	"11"	"144"	"225269.599365234"	"HCD"	"MS2"	"0"	"15.5"	"100.000"	"64.2734"	"21147"	"21147"	"21126"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"24.7"	""	"15.0"	""	"16.6"	""	"24.2"	""	"35.8"	"32.6"	""	"497"	"30"	"33.000"	"26.000"	"0.0229258999647959"	"14"	"0"	"0.0002205"	"0.583"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EATNPPIIQEEKPK"	"[R].eATNPPIIQEEkPk.[K]"	"N-Term(TMT6plex); K12(TMT6plex); K14(TMT6plex)"	"1"	"1"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"P11598"	"Protein disulfide-isomerase A3 OS=Rattus norvegicus OX=10116 GN=Pdia3 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"761.12103"	"2281.34854"	"2281.33706"	"5.03"	"0.00383"	"10/144"	"10"	"144"	"318696.5"	"HCD"	"MS2"	"43.20934"	"24.0"	"100.000"	"64.1625"	"21069"	"21069"	"21060"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"30.4"	""	"22.6"	""	"41.3"	""	"51.0"	"50.8"	""	"491"	"20"	"33.000"	"26.000"	"0.233373476842617"	"14"	"0"	"0.0003159"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQELVQYPVEHPDK"	"[R].eLQELVQYPVEHPDk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.8889"	"0.0000"	"1"	"1"	"1"	"571.31586"	"2282.24160"	"2282.24327"	"-0.73"	"-0.00042"	"10/162"	"10"	"162"	"470481.675231934"	"HCD"	"MS2"	"28.58345"	"10.3"	"100.000"	"101.4246"	"36142"	"36142"	"36119"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.6"	""	"11.3"	""	"16.3"	""	"16.3"	""	"18.6"	"17.3"	""	"1141"	"27"	"37.000"	"30.000"	"0.119194344265223"	"17"	"0"	"2.987E-05"	"0.762"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQELVQYPVEHPDK"	"[R].eLQELVQYPVEHPDk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.9200"	"0.0000"	"1"	"1"	"1"	"761.41949"	"2282.24393"	"2282.24327"	"0.29"	"0.00022"	"13/162"	"13"	"162"	"388353.305358887"	"HCD"	"MS2"	"3.792417"	"12.2"	"100.000"	"101.3162"	"36098"	"36098"	"36080"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.3"	""	"19.5"	""	"12.5"	""	"18.2"	""	"26.2"	"20.5"	""	"1131"	"25"	"37.000"	"30.000"	"0.170385490667725"	"16"	"0"	"1.066E-05"	"0.854"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQELVQYPVEHPDK"	"[R].eLQELVQYPVEHPDk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"3"	"3"	"0.9048"	"0.0000"	"1"	"1"	"1"	"761.41968"	"2282.24448"	"2282.24327"	"0.53"	"0.00040"	"13/162"	"13"	"162"	"251645.511901855"	"HCD"	"MS2"	"0"	"8.8"	"100.000"	"101.5838"	"36232"	"36232"	"36214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.5"	""	"10.3"	""	"7.5"	""	"17.3"	"2.2"	"19.3"	"12.2"	""	"1116"	"42"	"37.000"	"30.000"	"0.00377254300268725"	"20"	"0"	"1.105E-06"	"1.056"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"ELQELVQYPVEHPDK"	"[R].eLQELVQYPVEHPDk.[F]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"P46462"	"Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus OX=10116 GN=Vcp PE=1 SV=3"	"0"	"4"	"4"	"0.8929"	"0.0000"	"1"	"1"	"1"	"571.31665"	"2282.24477"	"2282.24327"	"0.66"	"0.00038"	"12/162"	"12"	"162"	"363149.536376953"	"HCD"	"MS2"	"29.76587"	"9.1"	"100.000"	"101.5884"	"36234"	"36234"	"36214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.8"	""	"11.7"	""	"10.2"	""	"18.8"	""	"12.8"	"21.1"	""	"1115"	"28"	"37.000"	"30.000"	"0.0830318800823835"	"17"	"0"	"2.634E-05"	"0.773"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITNEEYGEFYK"	"[R].nPDDITNEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"764.70728"	"2292.10727"	"2292.10723"	"0.02"	"0.00001"	"11/158"	"11"	"158"	"249357.689025879"	"HCD"	"MS2"	"8.710223"	"12.0"	"100.000"	"102.8210"	"36729"	"36729"	"36705"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"25.4"	""	"15.5"	""	"12.6"	""	"21.2"	""	"21.7"	"17.5"	""	"897"	"34"	"36.000"	"29.000"	"0.01818705781486"	"15"	"0"	"0.0003687"	"0.537"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NPDDITNEEYGEFYK"	"[R].nPDDITNEEYGEFYk.[S]"	"N-Term(TMT6plex); K15(TMT6plex)"	"1"	"1"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"P82995"	"Heat shock protein HSP 90-alpha OS=Rattus norvegicus OX=10116 GN=Hsp90aa1 PE=1 SV=3"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"764.70734"	"2292.10746"	"2292.10723"	"0.10"	"0.00008"	"11/158"	"11"	"158"	"293282.678771973"	"HCD"	"MS2"	"0"	"12.4"	"100.000"	"102.5734"	"36607"	"36607"	"36577"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"13.7"	""	"13.9"	""	"18.4"	""	"25.4"	"23.2"	""	"898"	"33"	"36.000"	"29.000"	"0.0246176357249463"	"16"	"0"	"0.0002414"	"0.575"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGTTNPHVFPEGSEPK"	"[R].gEGGTTNPHVFPEGSEPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.73096"	"2298.17832"	"2298.17665"	"0.73"	"0.00056"	"15/186"	"15"	"186"	"355268.839416504"	"HCD"	"MS2"	"7.947489"	"14.7"	"100.000"	"51.0303"	"15740"	"15740"	"15717"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.5"	""	"19.9"	""	"18.6"	""	"18.8"	""	"29.1"	"30.4"	""	"1266"	"31"	"38.000"	"31.000"	"0.0467093377671721"	"14"	"0"	"1.465E-05"	"0.825"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GEGGTTNPHVFPEGSEPK"	"[R].gEGGTTNPHVFPEGSEPk.[V]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"B2RYG6"	"Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"766.73169"	"2298.18052"	"2298.17665"	"1.68"	"0.00129"	"11/186"	"11"	"186"	"338280.92565918"	"HCD"	"MS2"	"16.58597"	"15.7"	"100.000"	"50.6679"	"15626"	"15626"	"15610"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"27.4"	""	"16.7"	""	"24.3"	""	"23.0"	""	"31.0"	"26.9"	""	"1261"	"33"	"37.000"	"31.000"	"0.033241842762709"	"15"	"0"	"0.0002442"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEEAPGHRPTTNPNASK"	"[K].hEEAPGHRPTTnPNASk.[F]"	"N-Term(TMT6plex); N12(Deamidated); K17(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"4"	"4"	"0.7273"	"0.0000"	"1"	"1"	"1"	"576.30823"	"2302.21108"	"2302.19403"	"7.41"	"0.00426"	"9/174"	"9"	"174"	"873028.934692383"	"HCD"	"MS2"	"22.0314"	"39.9"	"100.000"	"20.0033"	"3318"	"3318"	"3311"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"44.6"	""	"45.3"	""	"65.9"	""	"76.4"	"95.0"	""	"1296"	"11"	"38.000"	"31.000"	"4.69434502128594"	"16"	"0"	"0.0003172"	"0.551"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"HEEAPGHRPTTNPNASK"	"[K].hEEAPGHRPTTNPnASk.[F]"	"N-Term(TMT6plex); N14(Deamidated); K17(TMT6plex)"	"1"	"1"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"P47875"	"Cysteine and glycine-rich protein 1 OS=Rattus norvegicus OX=10116 GN=Csrp1 PE=1 SV=2"	"0"	"4"	"4"	"0.7273"	"0.0000"	"1"	"2"	"2"	"576.30823"	"2302.21108"	"2302.19403"	"7.41"	"0.00426"	"8/174"	"8"	"174"	"873028.934692383"	"HCD"	"MS2"	"22.0314"	"39.9"	"100.000"	"20.0033"	"3318"	"3318"	"3311"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"52.7"	""	"44.6"	""	"45.3"	""	"65.9"	""	"76.4"	"95.0"	""	"1296"	"11"	"38.000"	"31.000"	"5.21885229896996"	"16"	"9.9E-05"	"0.0006781"	"0.483"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EITGIGPSTTTETETIAK"	"[K].eITGIGPSTTTETETIAk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"Q6AY86"	"Vacuolar protein sorting-associated protein 26A OS=Rattus norvegicus OX=10116 GN=Vps26a PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"769.76031"	"2307.26639"	"2307.26954"	"-1.37"	"-0.00105"	"9/164"	"9"	"164"	"132291.531311035"	"HCD"	"MS2"	"15.43782"	"7.8"	"100.000"	"96.7425"	"34246"	"34246"	"34219"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.6"	""	"9.2"	""	"6.2"	""	"13.2"	""	"14.3"	"21.3"	""	"1206"	"18"	"37.000"	"30.000"	"0.867595542688274"	"15"	"0.0001991"	"0.002328"	"0.372"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALMTDPk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9167"	"0.0000"	"1"	"1"	"1"	"771.41107"	"2312.21866"	"2312.22082"	"-0.93"	"-0.00072"	"15/188"	"15"	"188"	"517039.795959473"	"HCD"	"MS2"	"9.980583"	"13.7"	"100.000"	"107.0687"	"38418"	"38418"	"38401"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.9"	""	"21.7"	""	"20.2"	""	"12.9"	""	"17.8"	"22.0"	""	"1432"	"48"	"38.000"	"31.000"	"0.00121035570705658"	"20"	"0"	"7.335E-06"	"0.887"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALMTDPk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"771.41223"	"2312.22214"	"2312.22082"	"0.57"	"0.00044"	"5/188"	"5"	"188"	"103088.544250488"	"HCD"	"MS2"	"0"	"3.4"	"100.000"	"107.1094"	"38415"	"38415"	"38401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.9"	""	"4.8"	""	"4.7"	""	"6.0"	""	"4.1"	"6.3"	""	"1471"	"11"	"38.000"	"31.000"	"5.24303403658055"	"13"	"0.001261"	"0.009934"	"0.242"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALMTDPk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"771.41241"	"2312.22269"	"2312.22082"	"0.81"	"0.00062"	"11/188"	"11"	"188"	"157956.62310791"	"HCD"	"MS2"	"11.16551"	"5.5"	"100.000"	"107.3602"	"38532"	"38532"	"38517"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.8"	""	"6.2"	""	"8.9"	""	"5.3"	""	"8.6"	"10.2"	""	"1477"	"24"	"38.000"	"31.000"	"0.280124116403064"	"17"	"9.9E-05"	"0.000515"	"0.507"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALMTDPk.[Y]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"771.41241"	"2312.22269"	"2312.22082"	"0.81"	"0.00062"	"13/188"	"13"	"188"	"720159.945068359"	"HCD"	"MS2"	"6.1615"	"15.9"	"100.000"	"106.7875"	"38288"	"38288"	"38269"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"33.6"	""	"28.6"	""	"26.7"	""	"17.5"	""	"20.5"	"24.1"	""	"1477"	"29"	"38.000"	"31.000"	"0.091064791933955"	"15"	"0"	"4.679E-05"	"0.722"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALmTDPk.[Y]"	"N-Term(TMT6plex); M14(Oxidation); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.8000"	"0.0000"	"1"	"1"	"1"	"776.74207"	"2328.21164"	"2328.21573"	"-1.76"	"-0.00136"	"5/188"	"5"	"188"	"70327.6671142578"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"92.2533"	"32432"	"32432"	"32407"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.4"	""	"5.2"	""	"4.7"	""	"9.5"	""	"8.3"	"10.2"	""	"1386"	"10"	"38.000"	"31.000"	"7.07511062209423"	"15"	"0.001615"	"0.01366"	"0.213"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALmTDPk.[Y]"	"N-Term(TMT6plex); M14(Oxidation); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.9070"	"0.0000"	"1"	"1"	"1"	"776.74310"	"2328.21476"	"2328.21573"	"-0.42"	"-0.00033"	"13/188"	"13"	"188"	"442049.70501709"	"HCD"	"MS2"	"2.942178"	"11.3"	"100.000"	"91.8146"	"32289"	"32289"	"32267"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.4"	""	"16.8"	""	"15.9"	""	"25.5"	""	"16.3"	"18.3"	""	"1419"	"43"	"38.000"	"31.000"	"0.0035071343241716"	"19"	"0"	"1.189E-05"	"0.844"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NALPAPSDDPTALMTDPK"	"[R].nALPAPSDDPTALmTDPk.[Y]"	"N-Term(TMT6plex); M14(Oxidation); K18(TMT6plex)"	"1"	"1"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"P04041"	"Glutathione peroxidase 1 OS=Rattus norvegicus OX=10116 GN=Gpx1 PE=1 SV=4"	"0"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"776.74365"	"2328.21640"	"2328.21573"	"0.29"	"0.00022"	"13/188"	"13"	"188"	"401651.213317871"	"HCD"	"MS2"	"0"	"11.8"	"100.000"	"91.9516"	"32309"	"32309"	"32286"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"19.6"	""	"11.4"	""	"13.8"	""	"29.7"	""	"20.3"	"17.2"	""	"1419"	"36"	"38.000"	"31.000"	"0.0178218342315605"	"20"	"0"	"1.242E-05"	"0.84"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGTGGVDTAAVGGVFDVSNADR"	"[K].rGTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"784.06964"	"2350.19437"	"2350.19487"	"-0.21"	"-0.00017"	"12/246"	"12"	"246"	"192156.369140625"	"HCD"	"MS2"	"29.74603"	"6.1"	"100.000"	"82.9438"	"28684"	"28684"	"28661"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"7.1"	""	"10.6"	""	"13.4"	""	"8.9"	"7.8"	""	"1361"	"32"	"38.000"	"31.000"	"0.0465401875975013"	"14"	"0"	"2.456E-05"	"0.779"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RGTGGVDTAAVGGVFDVSNADR"	"[K].rGTGGVDTAAVGGVFDVSNADR.[L]"	"N-Term(TMT6plex)"	"1"	"1"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"P07335"	"Creatine kinase B-type OS=Rattus norvegicus OX=10116 GN=Ckb PE=1 SV=2"	"1"	"3"	"3"	"0.8333"	"0.0000"	"1"	"1"	"1"	"784.07025"	"2350.19620"	"2350.19487"	"0.57"	"0.00045"	"11/246"	"11"	"246"	"159835.956970215"	"HCD"	"MS2"	"10.14518"	"5.7"	"100.000"	"83.0952"	"28774"	"28774"	"28748"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.4"	""	"5.6"	""	"8.0"	""	"11.0"	""	"10.0"	"11.6"	""	"1371"	"24"	"38.000"	"31.000"	"0.306201602419485"	"18"	"9.9E-05"	"0.0007688"	"0.471"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DPFQESGLHLSPTAAEAK"	"[R].dPFQESGLHLSPTAAEAk.[E]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"Q920G2"	"Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus norvegicus OX=10116 GN=Slc9a3r2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"786.08942"	"2356.25370"	"2356.25490"	"-0.51"	"-0.00040"	"7/194"	"7"	"194"	"103081.573120117"	"HCD"	"MS2"	"43.447"	"3.9"	"100.000"	"98.3400"	"34922"	"34922"	"34902"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.3"	""	"2.4"	""	"3.2"	""	"8.6"	""	"9.6"	"9.6"	""	"1342"	"1"	"38.000"	"31.000"	"47.8324383214894"	"13"	"0.00212"	"0.0194"	"0.182"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"MRPSTDTLTVTVENSHGLR"	"[K].mRPSTDTLTVTVENSHGLR.[V]"	"N-Term(TMT6plex); M1(Oxidation)"	"1"	"1"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"P08649"	"Complement C4 OS=Rattus norvegicus OX=10116 GN=C4 PE=1 SV=3"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"590.56110"	"2359.22255"	"2359.22372"	"-0.50"	"-0.00029"	"11/200"	"11"	"200"	"1336973.48535156"	"HCD"	"MS2"	"24.88113"	"30.6"	"100.000"	"52.3830"	"16286"	"16286"	"16259"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"48.5"	""	"40.7"	""	"39.2"	""	"47.5"	""	"61.6"	"54.9"	""	"1402"	"16"	"38.000"	"31.000"	"1.76896002150888"	"13"	"9.9E-05"	"0.0007603"	"0.472"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVPMSTVFYPSDGVATEK"	"[R].sVPmSTVFYPSDGVATEk.[A]"	"N-Term(TMT6plex); M4(Oxidation); K18(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"797.08313"	"2389.23484"	"2389.23613"	"-0.54"	"-0.00043"	"7/168"	"7"	"168"	"152523.381164551"	"HCD"	"MS2"	"41.72259"	"7.6"	"100.000"	"99.8971"	"35523"	"35523"	"35492"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.0"	""	"10.0"	""	"9.4"	""	"18.2"	""	"11.4"	"13.5"	""	"1397"	"12"	"38.000"	"31.000"	"4.74423737383103"	"13"	"0.001261"	"0.0101"	"0.241"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIDPIPAPVGDSNVDSGAK"	"[R].sVIDPIPAPVGDSNVDSGAk.[S]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"3"	"3"	"0.9600"	"0.0000"	"1"	"1"	"1"	"799.43988"	"2396.30509"	"2396.30733"	"-0.93"	"-0.00075"	"17/196"	"17"	"196"	"341137.215515137"	"HCD"	"MS2"	"0"	"10.0"	"100.000"	"104.8747"	"37526"	"37526"	"37518"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.5"	""	"16.0"	""	"14.3"	""	"17.5"	""	"14.9"	"18.1"	""	"1321"	"75"	"38.000"	"31.000"	"2.01313464064929E-06"	"20"	"0"	"4.939E-08"	"1.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIDPIPAPVGDSNVDSGAK"	"[R].sVIDPIPAPVGDSNVDSGAk.[S]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"799.43994"	"2396.30527"	"2396.30733"	"-0.86"	"-0.00068"	"14/196"	"14"	"196"	"173442.743652344"	"HCD"	"MS2"	"0"	"5.7"	"100.000"	"104.8802"	"37550"	"37550"	"37532"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.8"	""	"6.9"	""	"7.8"	""	"9.0"	""	"11.1"	"8.9"	""	"1320"	"65"	"38.000"	"31.000"	"1.99776286254686E-05"	"17"	"0"	"4.672E-07"	"1.133"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIDPIPAPVGDSNVDSGAK"	"[R].sVIDPIPAPVGDSNVDSGAk.[S]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"3"	"3"	"0.9394"	"0.0000"	"1"	"1"	"1"	"799.44037"	"2396.30655"	"2396.30733"	"-0.32"	"-0.00026"	"16/196"	"16"	"196"	"271883.667236328"	"HCD"	"MS2"	"3.352891"	"7.9"	"100.000"	"105.2237"	"37684"	"37684"	"37672"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.6"	""	"11.0"	""	"8.0"	""	"10.9"	""	"17.7"	"12.8"	""	"1317"	"66"	"38.000"	"31.000"	"1.74403734127251E-05"	"20"	"0"	"5.146E-08"	"1.33"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SVIDPIPAPVGDSNVDSGAK"	"[R].sVIDPIPAPVGDSNVDSGAk.[S]"	"N-Term(TMT6plex); K20(TMT6plex)"	"1"	"1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"Q64303"	"Serine/threonine-protein kinase PAK 2 OS=Rattus norvegicus OX=10116 GN=Pak2 PE=1 SV=1"	"0"	"3"	"3"	"0.9000"	"0.0000"	"1"	"1"	"1"	"799.44196"	"2396.31131"	"2396.30733"	"1.66"	"0.00133"	"12/196"	"12"	"196"	"154044.821838379"	"HCD"	"MS2"	"8.754471"	"5.2"	"100.000"	"104.5893"	"37415"	"37415"	"37387"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.3"	""	"10.1"	""	"7.7"	""	"5.7"	""	"8.1"	"8.2"	""	"1273"	"50"	"38.000"	"31.000"	"0.000568588940396242"	"20"	"0"	"1.042E-06"	"1.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.07672"	"2410.21561"	"2410.21599"	"-0.16"	"-0.00013"	"21/222"	"21"	"222"	"460214.431945801"	"HCD"	"MS2"	"11.48333"	"10.9"	"100.000"	"59.5711"	"19207"	"19207"	"19189"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"15.7"	""	"10.5"	""	"14.4"	""	"17.8"	""	"26.0"	"19.4"	""	"1365"	"85"	"38.000"	"31.000"	"2.1188619188976E-07"	"18"	"0"	"1.998E-11"	"2.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.9577"	"0.0000"	"1"	"1"	"1"	"804.07678"	"2410.21579"	"2410.21599"	"-0.08"	"-0.00007"	"20/222"	"20"	"222"	"378033.956787109"	"HCD"	"MS2"	"18.51855"	"8.6"	"100.000"	"59.3915"	"19169"	"19169"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"16.3"	""	"11.6"	""	"6.7"	""	"15.6"	""	"17.5"	"14.3"	""	"1365"	"71"	"38.000"	"31.000"	"5.24931525495611E-06"	"20"	"0"	"4.31E-10"	"1.758"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"0.9583"	"0.0000"	"1"	"1"	"1"	"804.07709"	"2410.21671"	"2410.21599"	"0.30"	"0.00024"	"15/222"	"15"	"222"	"217978.705383301"	"HCD"	"MS2"	"47.06305"	"10.4"	"100.000"	"59.8751"	"19331"	"19331"	"19305"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.4"	""	"9.8"	""	"17.0"	""	"19.8"	""	"20.3"	"17.5"	""	"1351"	"48"	"38.000"	"31.000"	"0.00104141865596743"	"18"	"0"	"8.066E-08"	"1.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SLAGSSGPGASSGPGGDHSDLIVR"	"[K].sLAGSSGPGASSGPGGDHSDLIVR.[I]"	"N-Term(TMT6plex)"	"1"	"1"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"Q68FR9"	"Elongation factor 1-delta OS=Rattus norvegicus OX=10116 GN=Eef1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.07715"	"2410.21689"	"2410.21599"	"0.37"	"0.00030"	"19/222"	"19"	"222"	"214957.450683594"	"HCD"	"MS2"	"0"	"8.5"	"100.000"	"59.7460"	"19312"	"19312"	"19288"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"13.3"	""	"10.3"	""	"9.4"	""	"11.9"	""	"18.3"	"18.4"	""	"1347"	"69"	"38.000"	"31.000"	"9.51344036303425E-06"	"17"	"0"	"2.556E-08"	"1.393"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPPTMDTDGSYFLYSK"	"[K].nTPPTmDTDGSYFLYSk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K17(TMT6plex)"	"1"	"2"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"804.39862"	"2411.18131"	"2411.18410"	"-1.16"	"-0.00093"	"9/188"	"9"	"188"	"232512.365844727"	"HCD"	"MS2"	"32.69476"	"12.2"	"100.000"	"101.4592"	"36156"	"36156"	"36135"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.9"	""	"16.4"	""	"12.3"	""	"21.1"	""	"24.6"	"23.3"	""	"1063"	"10"	"37.000"	"30.000"	"4.8921894738681"	"17"	"0.001951"	"0.01733"	"0.192"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPPTMDTDGSYFLYSK"	"[K].nTPPTmDTDGSYFLYSk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K17(TMT6plex)"	"1"	"2"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.9412"	"0.0000"	"1"	"1"	"1"	"804.39899"	"2411.18241"	"2411.18410"	"-0.70"	"-0.00056"	"9/188"	"9"	"188"	"357871.259765625"	"HCD"	"MS2"	"19.45716"	"15.0"	"100.000"	"100.8778"	"35921"	"35921"	"35906"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"23.0"	""	"18.8"	""	"17.8"	""	"31.5"	""	"29.7"	"22.5"	""	"1066"	"17"	"37.000"	"30.000"	"1.16876503054179"	"15"	"0.0007633"	"0.007289"	"0.27"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTPPTMDTDGSYFLYSK"	"[K].nTPPTmDTDGSYFLYSk.[L]"	"N-Term(TMT6plex); M6(Oxidation); K17(TMT6plex)"	"1"	"2"	"P20760"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1"	"P20760; P20759"	"Ig gamma-2A chain C region OS=Rattus norvegicus OX=10116 GN=Igg-2a PE=1 SV=1; Ig gamma-1 chain C region OS=Rattus norvegicus OX=10116 PE=1 SV=1"	"0"	"3"	"3"	"0.8889"	"0.0000"	"1"	"1"	"1"	"804.39960"	"2411.18424"	"2411.18410"	"0.06"	"0.00005"	"9/188"	"9"	"188"	"287729.90838623"	"HCD"	"MS2"	"43.2845"	"15.5"	"100.000"	"101.5769"	"36229"	"36229"	"36214"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"26.6"	""	"16.6"	""	"18.4"	"2.1"	"23.9"	""	"34.7"	"26.0"	""	"1077"	"9"	"37.000"	"30.000"	"6.64026952693768"	"14"	"0.0004582"	"0.006391"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.85181"	"2412.38540"	"2412.39027"	"-2.02"	"-0.00122"	"19/156"	"19"	"156"	"2616674.55316162"	"HCD"	"MS2"	"6.345415"	"36.6"	"100.000"	"99.6080"	"35433"	"35433"	"35412"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"50.7"	""	"46.2"	""	"44.2"	""	"62.8"	"0.2"	"74.3"	"68.4"	""	"734"	"26"	"35.000"	"28.000"	"0.0974240241245022"	"14"	"0"	"4.648E-06"	"0.928"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.85217"	"2412.38686"	"2412.39027"	"-1.41"	"-0.00085"	"18/156"	"18"	"156"	"4558444.99017334"	"HCD"	"MS2"	"1.828746"	"56.5"	"100.000"	"99.5330"	"35374"	"35374"	"35351"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"79.6"	""	"66.8"	""	"65.9"	""	"88.0"	""	"119.8"	"117.1"	""	"723"	"22"	"35.000"	"28.000"	"0.218327429519561"	"14"	"0"	"6.496E-06"	"0.898"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"5"	"5"	"0.8182"	"0.0000"	"1"	"1"	"1"	"483.28360"	"2412.38889"	"2412.39027"	"-0.57"	"-0.00027"	"9/156"	"9"	"156"	"230770.000427246"	"HCD"	"MS2"	"22.56445"	"6.7"	"100.000"	"100.1323"	"35619"	"35619"	"35588"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.8"	""	"9.5"	""	"6.7"	""	"14.2"	""	"14.1"	"15.3"	""	"706"	"22"	"35.000"	"28.000"	"0.224271818943666"	"18"	"0"	"0.0002444"	"0.574"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"5"	"5"	"0.9259"	"0.0000"	"1"	"1"	"1"	"483.28378"	"2412.38981"	"2412.39027"	"-0.19"	"-0.00009"	"18/156"	"18"	"156"	"708364.334838867"	"HCD"	"MS2"	"0"	"14.8"	"100.000"	"100.1152"	"35639"	"35639"	"35618"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"18.3"	""	"15.0"	""	"18.1"	""	"25.5"	""	"32.7"	"32.4"	""	"689"	"27"	"35.000"	"28.000"	"0.0676377615370018"	"16"	"0"	"7.999E-06"	"0.88"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.85291"	"2412.38979"	"2412.39027"	"-0.20"	"-0.00012"	"17/156"	"17"	"156"	"4302749.38397217"	"HCD"	"MS2"	"7.282233"	"53.1"	"100.000"	"100.2445"	"35692"	"35692"	"35678"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"85.6"	""	"56.7"	""	"60.8"	""	"87.8"	"0.0"	"102.6"	"109.8"	""	"689"	"21"	"35.000"	"28.000"	"0.28986062629677"	"14"	"0"	"8.774E-06"	"0.871"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"5"	"5"	"0.9130"	"0.0000"	"1"	"1"	"1"	"483.28381"	"2412.38996"	"2412.39027"	"-0.13"	"-0.00006"	"11/156"	"11"	"156"	"3018427.74780273"	"HCD"	"MS2"	"0"	"41.7"	"100.000"	"99.7911"	"35479"	"35479"	"35461"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"64.2"	""	"45.8"	""	"44.0"	""	"74.6"	"0.7"	"87.8"	"78.7"	""	"689"	"23"	"35.000"	"28.000"	"0.155306354714533"	"16"	"0"	"7.765E-07"	"1.088"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8364"	"0.0000"	"1"	"1"	"1"	"804.80151"	"2412.38999"	"2412.39027"	"-0.12"	"-0.00009"	"18/156"	"18"	"156"	"2635506.50927734"	"HCD"	"MS2"	"0"	"45.4"	"100.000"	"100.1372"	"35621"	"35621"	"35604"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"58.5"	""	"49.1"	""	"57.1"	""	"70.3"	""	"96.2"	"103.4"	""	"689"	"55"	"35.000"	"28.000"	"0.000107198627813302"	"25"	"0"	"1.16E-06"	"1.052"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.80157"	"2412.39017"	"2412.39027"	"-0.04"	"-0.00003"	"7/156"	"7"	"156"	"116415.201721191"	"HCD"	"MS2"	"14.11307"	"5.2"	"100.000"	"101.7564"	"36277"	"36277"	"36248"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.5"	""	"8.6"	""	"8.4"	""	"6.4"	""	"10.5"	"9.5"	""	"688"	"10"	"35.000"	"28.000"	"3.52012789344579"	"13"	"0.0001991"	"0.002295"	"0.374"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.80176"	"2412.39072"	"2412.39027"	"0.19"	"0.00015"	"11/156"	"11"	"156"	"569522.979675293"	"HCD"	"MS2"	"24.13133"	"16.1"	"100.000"	"100.4420"	"35744"	"35744"	"35724"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.2"	""	"13.8"	""	"22.2"	""	"25.6"	"1.0"	"29.8"	"36.2"	""	"687"	"18"	"35.000"	"28.000"	"0.518712532955385"	"14"	"0"	"0.000383"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"5"	"5"	"0.9286"	"0.0000"	"1"	"1"	"1"	"483.28397"	"2412.39072"	"2412.39027"	"0.19"	"0.00009"	"6/156"	"6"	"156"	"2394958.13214111"	"HCD"	"MS2"	"3.980294"	"35.2"	"100.000"	"99.8113"	"35515"	"35515"	"35495"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"61.1"	""	"43.6"	""	"36.6"	""	"52.1"	"1.6"	"68.4"	"70.5"	""	"687"	"28"	"35.000"	"28.000"	"0.0590101530988632"	"16"	"0"	"1.945E-08"	"1.417"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.9615"	"0.0000"	"1"	"1"	"1"	"603.85321"	"2412.39101"	"2412.39027"	"0.31"	"0.00019"	"18/156"	"18"	"156"	"741147.862670898"	"HCD"	"MS2"	"16.73999"	"13.8"	"100.000"	"100.5605"	"35820"	"35820"	"35801"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.0"	""	"17.6"	""	"15.2"	""	"24.4"	""	"26.8"	"27.9"	""	"680"	"26"	"35.000"	"28.000"	"0.0951653648675683"	"15"	"0"	"8.135E-06"	"0.878"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.9615"	"0.0000"	"1"	"1"	"1"	"603.85321"	"2412.39101"	"2412.39027"	"0.31"	"0.00019"	"17/156"	"17"	"156"	"2924894.50378418"	"HCD"	"MS2"	"10.89859"	"35.8"	"100.000"	"100.1718"	"35635"	"35635"	"35620"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"60.0"	""	"44.6"	""	"37.7"	""	"55.6"	"0.2"	"65.7"	"76.0"	""	"680"	"26"	"35.000"	"28.000"	"0.0863930719886764"	"15"	"0"	"4.676E-06"	"0.927"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5472"	"0.0000"	"1"	"1"	"1"	"804.80188"	"2412.39109"	"2412.39027"	"0.34"	"0.00027"	"20/156"	"20"	"156"	"5292320.04394531"	"HCD"	"MS2"	"0"	"81.2"	"100.000"	"100.1799"	"35666"	"35666"	"35649"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"118.7"	""	"88.1"	""	"95.9"	""	"135.6"	""	"164.3"	"174.6"	""	"680"	"53"	"35.000"	"28.000"	"0.000169620725736404"	""	"0"	"8.936E-07"	"1.075"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8947"	"0.0000"	"1"	"1"	"1"	"804.80200"	"2412.39145"	"2412.39027"	"0.49"	"0.00040"	"9/156"	"9"	"156"	"283905.261657715"	"HCD"	"MS2"	"15.45478"	"7.8"	"100.000"	"100.7983"	"35917"	"35917"	"35893"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.4"	""	"9.1"	""	"6.8"	""	"15.4"	""	"14.4"	"17.4"	""	"680"	"19"	"35.000"	"28.000"	"0.386793277179966"	"16"	"0"	"0.0001774"	"0.603"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.6000"	"0.0000"	"1"	"1"	"1"	"804.80200"	"2412.39145"	"2412.39027"	"0.49"	"0.00040"	"17/156"	"17"	"156"	"1964630.42236328"	"HCD"	"MS2"	"0"	"35.8"	"100.000"	"99.5098"	"35365"	"35365"	"35335"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"53.7"	""	"44.0"	""	"34.2"	""	"64.0"	"1.7"	"71.9"	"69.9"	""	"680"	"50"	"35.000"	"28.000"	"0.000341569368694655"	""	"0"	"2.159E-06"	"0.997"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.8333"	"0.0000"	"1"	"1"	"1"	"603.85333"	"2412.39150"	"2412.39027"	"0.51"	"0.00031"	"16/156"	"16"	"156"	"578533.703735352"	"HCD"	"MS2"	"20.11267"	"14.1"	"100.000"	"100.5225"	"35777"	"35777"	"35755"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.9"	""	"14.6"	""	"14.2"	""	"26.1"	""	"27.2"	"31.5"	""	"680"	"18"	"35.000"	"28.000"	"0.501740221313804"	"17"	"9.9E-05"	"0.0004842"	"0.513"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"804.80206"	"2412.39164"	"2412.39027"	"0.57"	"0.00046"	"20/156"	"20"	"156"	"821023.802368164"	"HCD"	"MS2"	"5.546546"	"16.0"	"100.000"	"99.5849"	"35424"	"35424"	"35401"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"21.4"	""	"25.1"	""	"22.4"	""	"25.7"	""	"31.3"	"26.9"	""	"678"	"32"	"35.000"	"28.000"	"0.0194625480688284"	"15"	"0"	"6.709E-05"	"0.689"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.8542"	"0.0000"	"1"	"1"	"1"	"804.80255"	"2412.39310"	"2412.39027"	"1.17"	"0.00094"	"14/156"	"14"	"156"	"819967.759765625"	"HCD"	"MS2"	"14.19375"	"21.0"	"100.000"	"100.4847"	"35789"	"35789"	"35769"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.5"	""	"34.6"	""	"25.0"	""	"30.1"	""	"46.0"	"35.5"	""	"654"	"48"	"35.000"	"28.000"	"0.000548968913926077"	"23"	"0"	"4.689E-05"	"0.721"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.7200"	"0.0000"	"1"	"1"	"1"	"804.80371"	"2412.39658"	"2412.39027"	"2.62"	"0.00210"	"21/156"	"21"	"156"	"38594121.5605469"	"HCD"	"MS2"	"0"	"154.9"	"27.369"	"99.8780"	"35543"	"35543"	"35527"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"212.9"	""	"170.6"	""	"190.4"	""	"265.1"	""	"316.7"	"318.4"	""	"626"	"50"	"34.000"	"27.000"	"0.000287438102699361"	""	"0"	"1.46E-06"	"1.032"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"1.0000"	"0.0000"	"1"	"1"	"1"	"603.85516"	"2412.39882"	"2412.39027"	"3.55"	"0.00214"	"14/156"	"14"	"156"	"45627965.9470215"	"HCD"	"MS2"	"0"	"129.3"	"24.837"	"99.8280"	"35494"	"35494"	"35476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"186.2"	""	"149.2"	""	"156.8"	""	"210.0"	"1.5"	"263.3"	"259.7"	""	"613"	"29"	"34.000"	"27.000"	"0.035845156334759"	"14"	"0"	"5.283E-06"	"0.917"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5882"	"0.0000"	"1"	"1"	"1"	"804.80450"	"2412.39896"	"2412.39027"	"3.60"	"0.00290"	"21/156"	"21"	"156"	"37513845.1071777"	"HCD"	"MS2"	"0"	"135.5"	"24.336"	"99.8235"	"35493"	"35493"	"35476"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"188.6"	""	"160.3"	""	"164.8"	""	"222.3"	""	"269.7"	"281.9"	""	"606"	"51"	"34.000"	"27.000"	"0.000215994468128335"	""	"0"	"7.321E-07"	"1.093"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"4"	"4"	"0.9500"	"0.0000"	"1"	"1"	"1"	"603.85535"	"2412.39956"	"2412.39027"	"3.85"	"0.00232"	"5/156"	"5"	"156"	"45542801.911377"	"HCD"	"MS2"	"0"	"122.1"	"25.091"	"99.9171"	"35559"	"35559"	"35542"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"172.0"	""	"136.3"	""	"144.8"	""	"192.2"	""	"264.0"	"251.8"	""	"609"	"20"	"34.000"	"27.000"	"0.290795242443527"	"14"	"0"	"2.517E-05"	"0.777"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLnPk.[A]"	"N-Term(TMT6plex); N16(Deamidated); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.12946"	"2413.37381"	"2413.37428"	"-0.19"	"-0.00016"	"12/156"	"12"	"156"	"289026.051635742"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"102.4306"	"36573"	"36573"	"36553"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"11.5"	""	"11.0"	""	"13.0"	""	"12.1"	""	"15.3"	"13.2"	""	"854"	"12"	"36.000"	"29.000"	"2.60872244634679"	"13"	"9.9E-05"	"0.001002"	"0.448"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPVLLTEAPLNPK"	"[R].vAPEEHPVLLTEAPLnPk.[A]"	"N-Term(TMT6plex); N16(Deamidated); K18(TMT6plex)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.13147"	"2413.37986"	"2413.37428"	"2.31"	"0.00186"	"12/156"	"12"	"156"	"312057.668273926"	"HCD"	"MS2"	"0"	"8.9"	"100.000"	"102.1276"	"36428"	"36428"	"36401"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.8"	""	"11.9"	""	"15.7"	""	"13.1"	""	"13.7"	"17.1"	""	"796"	"17"	"35.000"	"29.000"	"0.754888956642036"	"14"	"9.9E-05"	"0.0005892"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPTLLTEAPLNPK"	"[R].vAPEEHPTLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"4"	"4"	"0.8710"	"0.0000"	"1"	"1"	"1"	"604.34766"	"2414.36880"	"2414.36953"	"-0.31"	"-0.00018"	"18/156"	"18"	"156"	"1291111.74963379"	"HCD"	"MS2"	"5.125636"	"25.6"	"100.000"	"97.1653"	"34447"	"34447"	"34431"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"34.4"	""	"19.7"	""	"28.7"	""	"41.8"	"0.3"	"50.1"	"68.0"	""	"935"	"31"	"36.000"	"29.000"	"0.0337894883184015"	"18"	"0"	"5.398E-06"	"0.915"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPTLLTEAPLNPK"	"[R].vAPEEHPTLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.46118"	"2414.36899"	"2414.36953"	"-0.22"	"-0.00018"	"13/156"	"13"	"156"	"1757395.94696045"	"HCD"	"MS2"	"0"	"36.7"	"100.000"	"96.9642"	"34335"	"34335"	"34322"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"34.1"	""	"21.2"	""	"32.1"	""	"60.9"	"0.1"	"84.2"	"118.1"	""	"939"	"34"	"36.000"	"29.000"	"0.0209235608622628"	"15"	"0"	"4.422E-05"	"0.727"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPTLLTEAPLNPK"	"[R].vAPEEHPTLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"805.46240"	"2414.37265"	"2414.36953"	"1.29"	"0.00104"	"13/156"	"13"	"156"	"633439.417602539"	"HCD"	"MS2"	"12.12143"	"16.9"	"100.000"	"96.8006"	"34300"	"34300"	"34279"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.8"	""	"16.5"	""	"12.7"	""	"25.8"	""	"38.6"	"48.6"	""	"878"	"40"	"36.000"	"29.000"	"0.00456524952798957"	"15"	"0"	"1.84E-05"	"0.805"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"VAPEEHPTLLTEAPLNPK"	"[R].vAPEEHPTLLTEAPLNPk.[A]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"0.8667"	"0.0000"	"1"	"1"	"1"	"805.46423"	"2414.37815"	"2414.36953"	"3.57"	"0.00287"	"9/156"	"9"	"156"	"365840.57321167"	"HCD"	"MS2"	"38.08027"	"11.0"	"100.000"	"96.6709"	"34217"	"34217"	"34194"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.5"	""	"11.2"	""	"11.0"	""	"19.3"	""	"25.0"	"29.6"	""	"821"	"30"	"36.000"	"29.000"	"0.0389325779185018"	"19"	"0"	"0.0002987"	"0.556"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYNPGDQSTDYGIFQINSR"	"[R].nYNPGDQSTDYGIFQINSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.72198"	"2418.15140"	"2418.15233"	"-0.38"	"-0.00031"	"11/204"	"11"	"204"	"142125.581115723"	"HCD"	"MS2"	"7.513403"	"2.1"	"100.000"	"106.4094"	"38157"	"38157"	"38142"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"4.1"	""	""	""	"3.1"	""	"3.8"	""	"5.5"	"3.8"	""	"942"	"27"	"36.000"	"29.000"	"0.0920493883670211"	"14"	"0"	"0.0002608"	"0.568"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NYNPGDQSTDYGIFQINSR"	"[R].nYNPGDQSTDYGIFQINSR.[Y]"	"N-Term(TMT6plex)"	"1"	"1"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"P00697"	"Lysozyme C-1 OS=Rattus norvegicus OX=10116 GN=Lyz1 PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"806.72229"	"2418.15232"	"2418.15233"	"-0.01"	"-0.00001"	"12/204"	"12"	"204"	"139107.884765625"	"HCD"	"MS2"	"8.899276"	"2.8"	"100.000"	"106.0871"	"38010"	"38010"	"37998"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"3.9"	""	"5.0"	""	"3.7"	""	"3.8"	""	"4.7"	"5.9"	""	"942"	"23"	"36.000"	"29.000"	"0.238243415803467"	"14"	"0"	"0.0003477"	"0.542"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nMGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9655"	"0.0000"	"1"	"1"	"1"	"807.02673"	"2419.06565"	"2419.06828"	"-1.09"	"-0.00088"	"17/246"	"17"	"246"	"160981.870910645"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"59.0441"	"19028"	"19028"	"18998"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.2"	""	"4.6"	""	"5.4"	""	"7.8"	""	"8.2"	"9.7"	""	"339"	"58"	"32.000"	"25.000"	"2.71125085850186E-05"	"18"	"0"	"6.434E-07"	"1.105"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nMGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.02710"	"2419.06675"	"2419.06828"	"-0.64"	"-0.00051"	"9/246"	"9"	"246"	"117740.776855469"	"HCD"	"MS2"	"9.686519"	"4.6"	"100.000"	"59.3938"	"19170"	"19170"	"19145"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.6"	""	"8.1"	""	"5.8"	""	"6.0"	""	"9.0"	"9.0"	""	"349"	"6"	"32.000"	"25.000"	"4.1956130860121"	"13"	"0"	"3.979E-05"	"0.736"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nMGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.02759"	"2419.06821"	"2419.06828"	"-0.03"	"-0.00002"	"19/246"	"19"	"246"	"230808.58404541"	"HCD"	"MS2"	"0"	"6.0"	"100.000"	"59.2997"	"19097"	"19097"	"19070"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"13.3"	""	"7.2"	""	"2.7"	""	"7.4"	""	"15.6"	"10.8"	""	"358"	"63"	"32.000"	"25.000"	"8.44992843861827E-06"	"16"	"0"	"6.68E-10"	"1.719"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNVGDEGGFAPNILENK"	"[K].dATNVGDEGGFAPNILENk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.08820"	"2419.25003"	"2419.25054"	"-0.21"	"-0.00017"	"9/206"	"9"	"206"	"97731.3326416016"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"109.3746"	"39263"	"39263"	"39252"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.3"	""	"4.8"	""	"4.9"	""	"3.5"	""	"2.9"	"3.1"	""	"1461"	"18"	"38.000"	"31.000"	"1.09551977233448"	"14"	"0.0001991"	"0.004039"	"0.323"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNVGDEGGFAPNILENK"	"[K].dATNVGDEGGFAPNILENk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.08862"	"2419.25132"	"2419.25054"	"0.32"	"0.00026"	"11/206"	"11"	"206"	"108840.733215332"	"HCD"	"MS2"	"0"	"4.6"	"100.000"	"109.3839"	"39279"	"39279"	"39274"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.9"	""	"7.7"	""	"8.0"	""	"4.2"	""	"8.8"	"6.0"	""	"1447"	"36"	"38.000"	"31.000"	"0.0201575866550364"	"15"	"0"	"2.786E-05"	"0.768"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DATNVGDEGGFAPNILENK"	"[K].dATNVGDEGGFAPNILENk.[E]"	"N-Term(TMT6plex); K19(TMT6plex)"	"1"	"1"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"P04764"	"Alpha-enolase OS=Rattus norvegicus OX=10116 GN=Eno1 PE=1 SV=4"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"807.08893"	"2419.25223"	"2419.25054"	"0.70"	"0.00056"	"9/206"	"9"	"206"	"104428.326721191"	"HCD"	"MS2"	"20.8691"	"3.9"	"100.000"	"109.0794"	"39154"	"39154"	"39142"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"9.9"	""	"5.0"	""	"4.5"	""	"7.2"	""	"3.8"	"6.8"	""	"1449"	"18"	"38.000"	"31.000"	"1.04963520789318"	"14"	"0.0001991"	"0.003785"	"0.329"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEPVMDSDGSFFMYSK"	"[K].nTEPVMDSDGSFFmYSk.[L]"	"N-Term(TMT6plex); M14(Oxidation); K17(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.2222"	"0.0000"	"1"	"1"	"1"	"810.38361"	"2429.13626"	"2429.14052"	"-1.75"	"-0.00142"	"5/188"	"5"	"188"	"156396.085388184"	"HCD"	"MS2"	"13.07866"	"3.5"	"100.000"	"109.1537"	"39181"	"39181"	"39172"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.7"	""	"4.1"	""	"5.2"	""	"1.8"	""	"7.4"	"9.3"	""	"712"	"9"	"35.000"	"28.000"	"4.75828003890534"	"16"	"0.0001991"	"0.005866"	"0.29"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEPVMDSDGSFFMYSK"	"[K].nTEPVMDSDGSFFmYSk.[L]"	"N-Term(TMT6plex); M14(Oxidation); K17(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.5263"	"0.0000"	"1"	"1"	"1"	"810.38403"	"2429.13755"	"2429.14052"	"-1.22"	"-0.00099"	"6/188"	"6"	"188"	"85684.1773681641"	"HCD"	"MS2"	"10.59924"	"3.7"	"100.000"	"109.4375"	"39299"	"39299"	"39289"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"6.4"	""	"6.0"	""	"2.6"	""	"3.4"	""	"10.2"	"6.8"	""	"715"	"19"	"35.000"	"28.000"	"0.50382074543582"	"16"	"0.001348"	"0.01059"	"0.236"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nmGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.35913"	"2435.06284"	"2435.06320"	"-0.15"	"-0.00012"	"4/246"	"4"	"246"	"68336.0335083008"	"HCD"	"MS2"	"27.91794"	"1.7"	"100.000"	"45.9092"	"13663"	"13663"	"13637"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"3.9"	""	"1.8"	""	"4.1"	""	"3.9"	"2.9"	""	"295"	"3"	"31.000"	"24.000"	"7.81253579740195"	"13"	"9.9E-05"	"0.001008"	"0.447"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NMGGPYGGGNYGPGGSGGSGGYGGR"	"[R].nmGGPYGGGNYGPGGSGGSGGYGGR.[S]"	"N-Term(TMT6plex); M2(Oxidation)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.9767"	"0.0000"	"1"	"1"	"1"	"812.35919"	"2435.06302"	"2435.06320"	"-0.07"	"-0.00006"	"12/246"	"12"	"246"	"108981.373657227"	"HCD"	"MS2"	"0"	"2.6"	"100.000"	"45.4915"	"13527"	"13527"	"13496"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"5.2"	""	"3.1"	""	"3.4"	""	"4.0"	""	"3.9"	"5.7"	""	"295"	"43"	"31.000"	"24.000"	"0.000739251169600227"	"16"	"0"	"9.333E-06"	"0.866"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41522"	"2435.23111"	"2435.23172"	"-0.25"	"-0.00020"	"7/154"	"7"	"154"	"494866.62512207"	"HCD"	"MS2"	"14.05538"	"17.0"	"100.000"	"98.9746"	"35148"	"35148"	"35132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"24.4"	""	"19.6"	""	"16.8"	""	"36.7"	""	"33.9"	"31.4"	""	"1338"	"21"	"38.000"	"31.000"	"0.503994872137857"	"14"	"0.0001991"	"0.002502"	"0.366"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"4"	"4"	"0.3333"	"0.0000"	"1"	"1"	"1"	"609.56342"	"2435.23183"	"2435.23172"	"0.05"	"0.00003"	"9/154"	"9"	"154"	"957443.088500977"	"HCD"	"MS2"	"16.43522"	"18.5"	"100.000"	"99.1780"	"35230"	"35230"	"35210"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.1"	""	"19.1"	""	"25.4"	""	"34.3"	""	"35.9"	"35.3"	""	"1355"	"9"	"38.000"	"31.000"	"7.88695384925608"	"19"	"0.0001991"	"0.004418"	"0.315"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41547"	"2435.23185"	"2435.23172"	"0.05"	"0.00004"	"7/154"	"7"	"154"	"1447696.76141357"	"HCD"	"MS2"	"2.393459"	"42.4"	"100.000"	"99.3587"	"35332"	"35332"	"35319"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"75.2"	""	"39.7"	""	"44.9"	""	"80.3"	""	"84.4"	"77.6"	""	"1355"	"12"	"38.000"	"31.000"	"4.55941684632625"	"13"	"0.0001991"	"0.004858"	"0.306"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41571"	"2435.23258"	"2435.23172"	"0.35"	"0.00029"	"12/154"	"12"	"154"	"1574041.91864014"	"HCD"	"MS2"	"2.671131"	"47.4"	"100.000"	"99.2771"	"35271"	"35271"	"35254"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"61.7"	""	"58.2"	""	"54.0"	""	"90.9"	""	"95.7"	"92.7"	""	"1351"	"11"	"38.000"	"31.000"	"5.01909427649222"	"13"	"0.0001991"	"0.002404"	"0.37"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41583"	"2435.23294"	"2435.23172"	"0.50"	"0.00041"	"7/154"	"7"	"154"	"299395.590942383"	"HCD"	"MS2"	"20.55853"	"14.4"	"100.000"	"99.6046"	"35403"	"35403"	"35383"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.2"	""	"16.4"	""	"16.6"	""	"26.9"	""	"29.5"	"30.0"	""	"1355"	"13"	"38.000"	"31.000"	"3.14709098963413"	"13"	"0.004819"	"0.05724"	"0.082"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"YPIEHGIITNWDDMEK"	"[K].yPIEHGIITNWDDmEk.[I]"	"N-Term(TMT6plex); M14(Oxidation); K16(TMT6plex)"	"1"	"4"	"P68035"	"Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"P63269; P62738; P68136; P68035"	"Actin, gamma-enteric smooth muscle OS=Rattus norvegicus OX=10116 GN=Actg2 PE=2 SV=1; Actin, aortic smooth muscle OS=Rattus norvegicus OX=10116 GN=Acta2 PE=2 SV=1; Actin, alpha skeletal muscle OS=Rattus norvegicus OX=10116 GN=Acta1 PE=1 SV=1; Actin, alpha cardiac muscle 1 OS=Rattus norvegicus OX=10116 GN=Actc1 PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"812.41632"	"2435.23441"	"2435.23172"	"1.11"	"0.00090"	"5/154"	"5"	"154"	"801055.956420898"	"HCD"	"MS2"	"7.314219"	"23.7"	"100.000"	"99.0840"	"35222"	"35222"	"35202"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.8"	""	"23.9"	""	"26.5"	""	"45.8"	""	"49.2"	"51.4"	""	"1372"	"16"	"38.000"	"31.000"	"1.67233822140096"	"14"	"0.0001991"	"0.005057"	"0.303"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSGWYDADLSPAGHEEAK"	"[R].fSGWYDADLSPAGHEEAk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.9459"	"0.0000"	"1"	"1"	"1"	"813.40454"	"2438.19907"	"2438.20286"	"-1.55"	"-0.00126"	"11/164"	"11"	"164"	"131419.958435059"	"HCD"	"MS2"	"6.273561"	"7.3"	"100.000"	"103.2753"	"36905"	"36905"	"36884"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.5"	""	"9.1"	""	"7.7"	""	"13.0"	""	"14.1"	"15.9"	""	"1095"	"37"	"37.000"	"30.000"	"0.0122288079199972"	"17"	"0"	"0.0002834"	"0.561"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"FSGWYDADLSPAGHEEAK"	"[R].fSGWYDADLSPAGHEEAk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"P25113"	"Phosphoglycerate mutase 1 OS=Rattus norvegicus OX=10116 GN=Pgam1 PE=1 SV=4"	"0"	"3"	"3"	"0.9535"	"0.0000"	"1"	"1"	"1"	"813.40485"	"2438.19999"	"2438.20286"	"-1.18"	"-0.00096"	"12/164"	"12"	"164"	"162889.299316406"	"HCD"	"MS2"	"15.07604"	"8.0"	"100.000"	"102.9863"	"36775"	"36775"	"36746"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.8"	""	"10.3"	""	"7.4"	""	"15.7"	""	"14.2"	"15.7"	""	"1096"	"43"	"37.000"	"30.000"	"0.00294293424410898"	"18"	"0"	"7.556E-07"	"1.09"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPNGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.5000"	"0.0000"	"1"	"1"	"1"	"813.73895"	"2439.20230"	"2439.20934"	"-2.89"	"-0.00235"	"6/174"	"6"	"174"	"124701.067016602"	"HCD"	"MS2"	"15.77596"	"6.6"	"100.000"	"90.7411"	"31856"	"31856"	"31837"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"14.0"	""	"7.6"	""	"11.2"	""	"9.6"	""	"10.0"	"10.2"	""	"1062"	"14"	"37.000"	"30.000"	"2.04218236266083"	"13"	"0.001596"	"0.0129"	"0.219"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.1515"	"0.0000"	"1"	"1"	"1"	"813.74030"	"2439.20633"	"2439.20934"	"-1.23"	"-0.00100"	"9/174"	"9"	"174"	"221220.090148926"	"HCD"	"MS2"	"0"	"11.0"	"100.000"	"90.3291"	"31653"	"31653"	"31632"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.2"	""	"15.9"	""	"18.8"	""	"14.3"	""	"14.4"	"15.3"	""	"1095"	"33"	"37.000"	"30.000"	"0.0273768907899896"	"15"	"9.9E-05"	"0.0007366"	"0.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2105"	"0.0000"	"1"	"1"	"1"	"813.74054"	"2439.20707"	"2439.20934"	"-0.93"	"-0.00076"	"9/174"	"9"	"174"	"138110.63067627"	"HCD"	"MS2"	"11.78982"	"6.5"	"100.000"	"89.7125"	"31444"	"31444"	"31423"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"10.3"	""	"10.2"	""	"10.3"	""	"7.6"	""	"11.8"	"11.7"	""	"1097"	"19"	"37.000"	"30.000"	"0.760635572136231"	"15"	"0.001615"	"0.01431"	"0.209"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPNGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2258"	"0.0000"	"1"	"1"	"1"	"813.74115"	"2439.20890"	"2439.20934"	"-0.18"	"-0.00015"	"10/174"	"10"	"174"	"195769.211364746"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"90.0907"	"31595"	"31595"	"31577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.8"	""	"15.5"	""	"12.6"	""	"13.1"	""	"11.5"	"11.8"	""	"1133"	"31"	"37.000"	"30.000"	"0.0412287259270111"	"15"	"0.0001991"	"0.003331"	"0.34"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2258"	"0.0000"	"1"	"2"	"2"	"813.74115"	"2439.20890"	"2439.20934"	"-0.18"	"-0.00015"	"8/174"	"8"	"174"	"195769.211364746"	"HCD"	"MS2"	"0"	"9.2"	"100.000"	"90.0907"	"31595"	"31595"	"31577"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"22.8"	""	"15.5"	""	"12.6"	""	"13.1"	""	"11.5"	"11.8"	""	"1133"	"31"	"37.000"	"30.000"	"0.0485511939323005"	"15"	"9.9E-05"	"0.0005988"	"0.494"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPNGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2258"	"0.0000"	"1"	"1"	"1"	"813.74139"	"2439.20963"	"2439.20934"	"0.12"	"0.00010"	"11/174"	"11"	"174"	"175031.979492188"	"HCD"	"MS2"	"0"	"8.0"	"100.000"	"90.6520"	"31782"	"31782"	"31763"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"18.5"	""	"10.0"	""	"10.5"	""	"9.7"	""	"10.9"	"16.1"	""	"1137"	"31"	"37.000"	"30.000"	"0.0436245006702194"	"14"	"0.0001991"	"0.0053"	"0.299"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPNGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.1250"	"0.0000"	"1"	"1"	"1"	"813.74225"	"2439.21219"	"2439.20934"	"1.17"	"0.00095"	"8/174"	"8"	"174"	"161435.110839844"	"HCD"	"MS2"	"8.646358"	"7.7"	"100.000"	"89.9928"	"31517"	"31517"	"31491"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"14.7"	""	"10.3"	""	"12.0"	""	"11.9"	""	"12.1"	"12.0"	""	"1150"	"8"	"37.000"	"30.000"	"9.83258806176915"	"13"	"0.004073"	"0.04406"	"0.107"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPNGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2903"	"0.0000"	"1"	"1"	"1"	"813.74268"	"2439.21347"	"2439.20934"	"1.69"	"0.00138"	"8/174"	"8"	"174"	"211999.672302246"	"HCD"	"MS2"	"0"	"9.4"	"100.000"	"90.3950"	"31717"	"31717"	"31698"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"11.3"	""	"13.1"	""	"18.5"	""	"14.9"	"12.4"	""	"1156"	"31"	"37.000"	"30.000"	"0.0475256251669407"	"14"	"9.9E-05"	"0.0005883"	"0.495"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.06757"	"2440.18814"	"2440.19336"	"-2.14"	"-0.00174"	"6/174"	"6"	"174"	"94918.4899291992"	"HCD"	"MS2"	"9.395685"	"4.9"	"100.000"	"94.1839"	"33244"	"33244"	"33220"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"9.6"	""	"5.2"	""	"4.7"	""	"9.8"	""	"7.5"	"9.5"	""	"1017"	"7"	"37.000"	"30.000"	"10.8965987066955"	"13"	"0.004672"	"0.05515"	"0.086"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2500"	"0.0000"	"1"	"1"	"1"	"814.06836"	"2440.19052"	"2440.19336"	"-1.16"	"-0.00094"	"10/174"	"10"	"174"	"186117.69329834"	"HCD"	"MS2"	"0"	"7.6"	"100.000"	"95.5146"	"33781"	"33781"	"33761"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"12.5"	""	"10.2"	""	"12.2"	""	"12.2"	""	"13.7"	"11.3"	""	"1029"	"28"	"37.000"	"30.000"	"0.0736860674176237"	"14"	"0.0001991"	"0.002353"	"0.371"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2593"	"0.0000"	"1"	"1"	"1"	"814.06885"	"2440.19199"	"2440.19336"	"-0.56"	"-0.00046"	"10/174"	"10"	"174"	"223566.300415039"	"HCD"	"MS2"	"3.408829"	"9.6"	"100.000"	"95.8304"	"33909"	"33909"	"33891"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.9"	""	"13.6"	""	"18.0"	""	"14.1"	""	"12.2"	"15.0"	""	"1049"	"27"	"37.000"	"30.000"	"0.09370127330099"	"14"	"0"	"0.0003809"	"0.534"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.2381"	"0.0000"	"1"	"1"	"1"	"814.06921"	"2440.19309"	"2440.19336"	"-0.11"	"-0.00009"	"9/174"	"9"	"174"	"310846.702331543"	"HCD"	"MS2"	"0"	"12.2"	"100.000"	"95.6669"	"33810"	"33810"	"33792"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"21.7"	""	"18.3"	""	"18.9"	""	"18.2"	""	"20.0"	"19.3"	""	"1066"	"42"	"37.000"	"30.000"	"0.0036118292355649"	"15"	"0"	"0.0001082"	"0.647"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.3529"	"0.0000"	"1"	"1"	"1"	"814.06970"	"2440.19455"	"2440.19336"	"0.49"	"0.00040"	"8/174"	"8"	"174"	"107847.629394531"	"HCD"	"MS2"	"0"	"5.5"	"100.000"	"95.9923"	"33943"	"33943"	"33913"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.7"	""	"7.2"	""	"8.7"	""	"10.3"	""	"10.1"	"7.9"	""	"1081"	"17"	"37.000"	"30.000"	"1.07843928124068"	"15"	"0.0009352"	"0.008072"	"0.261"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NGNPNGGGLPHWPEYDQK"	"[R].nGNPnGGGLPHWPEYDQk.[E]"	"N-Term(TMT6plex); N1(Deamidated); N5(Deamidated); K18(TMT6plex)"	"1"	"1"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"P16303"	"Carboxylesterase 1D OS=Rattus norvegicus OX=10116 GN=Ces1d PE=1 SV=2"	"0"	"3"	"3"	"0.4211"	"0.0000"	"1"	"1"	"1"	"814.06976"	"2440.19474"	"2440.19336"	"0.56"	"0.00046"	"5/174"	"5"	"174"	"98594.7719726563"	"HCD"	"MS2"	"0"	"4.4"	"100.000"	"95.3738"	"33692"	"33692"	"33665"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"8.5"	""	"6.6"	""	"2.5"	""	"9.5"	""	"8.2"	"6.6"	""	"1082"	"19"	"37.000"	"30.000"	"0.734847574603649"	"14"	"0.0004582"	"0.006403"	"0.282"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LPPGPTPLPIFGNFLQIDMK"	"[K].lPPGPTPLPIFGNFLQIDmK.[D]"	"N-Term(TMT6plex); M19(Oxidation)"	"1"	"1"	"P11510"	"Cytochrome P450 2C12, female-specific OS=Rattus norvegicus OX=10116 GN=Cyp2c12 PE=2 SV=1"	"P11510"	"Cytochrome P450 2C12, female-specific OS=Rattus norvegicus OX=10116 GN=Cyp2c12 PE=2 SV=1"	"0"	"3"	"3"	"0.6667"	"0.0000"	"1"	"1"	"3"	"814.12262"	"2440.35331"	"2440.35116"	"0.88"	"0.00072"	"4/190"	"4"	"190"	"188377.759460449"	"HCD"	"MS2"	"17.78674"	"14.0"	"100.000"	"58.8854"	"18928"	"18928"	"18901"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"36.0"	""	"22.6"	""	"17.0"	""	"16.3"	""	"18.3"	"22.2"	""	"1152"	"3"	"37.000"	"30.000"	"30.8618874727685"	"13"	"0.005589"	"0.07049"	"0.062"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPVLVDSFEDSEPYRK"	"[K].dSPVLVDSFEDSEPYRk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.42505"	"2441.26059"	"2441.26004"	"0.23"	"0.00018"	"5/154"	"5"	"154"	"138645.585388184"	"HCD"	"MS2"	"0"	"9.0"	"100.000"	"99.9008"	"35552"	"35552"	"35527"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.4"	""	"15.0"	""	"11.7"	""	"13.5"	""	"14.3"	"11.1"	""	"1375"	"11"	"38.000"	"31.000"	"5.02658119894849"	"13"	"0.008135"	"0.1024"	"0.026"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DSPVLVDSFEDSEPYRK"	"[K].dSPVLVDSFEDSEPYRk.[L]"	"N-Term(TMT6plex); K17(TMT6plex)"	"1"	"1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"Q99PS8"	"Histidine-rich glycoprotein OS=Rattus norvegicus OX=10116 GN=Hrg PE=1 SV=1"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"814.42566"	"2441.26242"	"2441.26004"	"0.98"	"0.00079"	"8/154"	"8"	"154"	"169160.731811523"	"HCD"	"MS2"	"0"	"10.7"	"100.000"	"99.8118"	"35488"	"35488"	"35461"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"25.4"	""	"18.6"	""	"14.9"	""	"16.3"	""	"13.2"	"12.8"	""	"1387"	"13"	"38.000"	"31.000"	"3.84632931936311"	"13"	"0.004234"	"0.04862"	"0.097"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWENPPPSNAGLEDFER"	"[R].kWENPPPSNAGLEDFER.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.42340"	"2444.25565"	"2444.26104"	"-2.21"	"-0.00180"	"12/186"	"12"	"186"	"171397.442687988"	"HCD"	"MS2"	"10.79904"	"6.3"	"100.000"	"91.2429"	"32021"	"32021"	"31994"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"10.9"	""	"9.6"	""	"9.9"	""	"11.7"	""	"10.9"	"7.0"	""	"1431"	"17"	"38.000"	"31.000"	"1.44414113321416"	"14"	"0.0007633"	"0.007482"	"0.268"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWENPPPSNAGLEDFER"	"[R].kWENPPPSNAGLEDFER.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.42548"	"2444.26187"	"2444.26104"	"0.34"	"0.00028"	"10/186"	"10"	"186"	"149522.140991211"	"HCD"	"MS2"	"0"	"6.8"	"100.000"	"91.8731"	"32277"	"32277"	"32256"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"11.9"	""	"12.8"	""	"10.3"	""	"7.1"	""	"9.5"	"13.2"	""	"1442"	"11"	"38.000"	"31.000"	"5.64852772434439"	"13"	"0.0001991"	"0.003935"	"0.325"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWENPPPSNAGLEDFER"	"[R].kWENPPPSNAGLEDFER.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.42554"	"2444.26206"	"2444.26104"	"0.41"	"0.00034"	"11/186"	"11"	"186"	"295913.927307129"	"HCD"	"MS2"	"2.441486"	"10.5"	"100.000"	"91.4527"	"32142"	"32142"	"32125"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"19.2"	""	"13.7"	""	"15.8"	""	"17.2"	""	"16.1"	"17.7"	""	"1440"	"36"	"38.000"	"31.000"	"0.0162305223274975"	"15"	"0"	"1.597E-05"	"0.818"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWENPPPSNAGLEDFER"	"[R].kWENPPPSNAGLEDFER.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.42560"	"2444.26224"	"2444.26104"	"0.49"	"0.00040"	"11/186"	"11"	"186"	"164178.347229004"	"HCD"	"MS2"	"0"	"7.8"	"100.000"	"91.7732"	"32272"	"32272"	"32251"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"17.3"	""	"13.1"	""	"4.2"	""	"11.3"	""	"14.2"	"14.1"	""	"1439"	"19"	"38.000"	"31.000"	"1.00007091815801"	"14"	"0.0008247"	"0.007663"	"0.266"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWENPPPSNAGLEDFER"	"[R].kWENPPPSNAGLEDFER.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.42603"	"2444.26352"	"2444.26104"	"1.01"	"0.00083"	"10/186"	"10"	"186"	"336661.911865234"	"HCD"	"MS2"	"4.309558"	"13.8"	"100.000"	"91.5665"	"32152"	"32152"	"32132"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"20.7"	""	"28.0"	""	"20.5"	""	"18.3"	"1.2"	"16.6"	"25.0"	""	"1445"	"39"	"38.000"	"31.000"	"0.00922227039366197"	"15"	"0"	"2.333E-05"	"0.784"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"KWENPPPSNAGLEDFER"	"[R].kWENPPPSNAGLEDFER.[K]"	"N-Term(TMT6plex); K1(TMT6plex)"	"1"	"1"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"P68182"	"cAMP-dependent protein kinase catalytic subunit beta OS=Rattus norvegicus OX=10116 GN=Prkacb PE=1 SV=2"	"1"	"3"	"3"	"0.8750"	"0.0000"	"1"	"1"	"1"	"815.42688"	"2444.26609"	"2444.26104"	"2.06"	"0.00168"	"10/186"	"10"	"186"	"138198.447021484"	"HCD"	"MS2"	"0"	"6.3"	"100.000"	"91.1404"	"32017"	"32017"	"31993"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"8.7"	""	"7.8"	""	"13.4"	""	"10.0"	""	"10.6"	"9.1"	""	"1463"	"16"	"38.000"	"31.000"	"1.70299875498195"	"16"	"0.0001991"	"0.003556"	"0.334"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEPVMDSDGSFFMYSK"	"[K].nTEPVmDSDGSFFmYSk.[L]"	"N-Term(TMT6plex); M6(Oxidation); M14(Oxidation); K17(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"815.71570"	"2445.13254"	"2445.13543"	"-1.18"	"-0.00096"	"11/188"	"11"	"188"	"382620.869262695"	"HCD"	"MS2"	"20.9151"	"16.0"	"100.000"	"100.0739"	"35622"	"35622"	"35602"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"20.9"	""	"15.3"	""	"9.9"	""	"44.8"	"1.6"	"33.3"	"25.6"	""	"661"	"29"	"35.000"	"28.000"	"0.0402876062444668"	"14"	"0"	"4.334E-05"	"0.729"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"NTEPVMDSDGSFFMYSK"	"[K].nTEPVmDSDGSFFmYSk.[L]"	"N-Term(TMT6plex); M6(Oxidation); M14(Oxidation); K17(TMT6plex)"	"1"	"1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"P20761"	"Ig gamma-2B chain C region OS=Rattus norvegicus OX=10116 GN=Igh-1a PE=1 SV=1"	"0"	"3"	"3"	"0.8857"	"0.0000"	"1"	"1"	"1"	"815.71600"	"2445.13346"	"2445.13543"	"-0.81"	"-0.00066"	"14/188"	"14"	"188"	"480147.221252441"	"HCD"	"MS2"	"7.164427"	"19.0"	"100.000"	"99.9897"	"35560"	"35560"	"35540"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"27.5"	""	"24.3"	""	"14.6"	""	"51.4"	""	"30.0"	"33.0"	""	"661"	"35"	"35.000"	"28.000"	"0.0105237728093048"	"19"	"0"	"3.888E-05"	"0.738"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"DLYANTVLSGGTTMYPGIADR"	"[K].dLYAnTVLSGGTTmYPGIADR.[M]"	"N-Term(TMT6plex); N5(Deamidated); M14(Oxidation)"	"1"	"2"	"P60711"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1"	"P60711; P63259"	"Actin, cytoplasmic 1 OS=Rattus norvegicus OX=10116 GN=Actb PE=1 SV=1; Actin, cytoplasmic 2 OS=Rattus norvegicus OX=10116 GN=Actg1 PE=1 SV=1"	"0"	"3"	"3"	"0.5833"	"0.0000"	"1"	"1"	"1"	"821.07587"	"2461.21305"	"2461.21182"	"0.50"	"0.00041"	"10/230"	"10"	"230"	"99335.7110595703"	"HCD"	"MS2"	"36.38993"	"2.3"	"100.000"	"110.0270"	"39518"	"39518"	"39499"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"4.6"	""	"3.4"	""	"1.8"	""	"4.0"	""	"2.6"	"6.0"	""	"1185"	"24"	"37.000"	"30.000"	"0.258635630602298"	"24"	"0"	"7.648E-05"	"0.678"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"LGQSDPAPLQHQVDVYQK"	"[R].lGQSDPAPLQHQVDVYQk.[R]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"P50137"	"Transketolase OS=Rattus norvegicus OX=10116 GN=Tkt PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"827.78638"	"2481.34458"	"2481.35019"	"-2.26"	"-0.00187"	"6/186"	"6"	"186"	"114282.451171875"	"HCD"	"MS2"	"25.72317"	"5.6"	"100.000"	"85.1859"	"29590"	"29590"	"29559"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"7.5"	""	"8.2"	""	"10.2"	""	"8.3"	""	"10.1"	"9.5"	""	"1416"	"21"	"38.000"	"31.000"	"0.606782794423102"	"14"	"0.0001991"	"0.003481"	"0.336"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.44006"	"2501.30564"	"2501.30448"	"0.46"	"0.00039"	"10/232"	"10"	"232"	"127354.744506836"	"HCD"	"MS2"	"0"	"2.0"	"100.000"	"103.4565"	"36978"	"36978"	"36957"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.8"	""	"4.1"	""	""	""	"3.7"	""	"4.3"	"3.8"	""	"1429"	"39"	"38.000"	"31.000"	"0.00933259099570201"	"15"	"0"	"1.63E-05"	"0.816"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.44116"	"2501.30893"	"2501.30448"	"1.78"	"0.00149"	"25/232"	"25"	"232"	"972380.87701416"	"HCD"	"MS2"	"0"	"5.6"	"100.000"	"102.8848"	"36733"	"36733"	"36714"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"12.2"	""	"7.6"	""	"7.8"	""	"9.7"	""	"6.6"	"9.2"	""	"1428"	"98"	"38.000"	"31.000"	"1.16331736730476E-08"	"19"	"0"	"2.808E-12"	"2.208"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.44147"	"2501.30985"	"2501.30448"	"2.15"	"0.00179"	"12/232"	"12"	"232"	"111978.195678711"	"HCD"	"MS2"	"4.610492"	"2.3"	"100.000"	"103.2107"	"36862"	"36862"	"36839"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"2.9"	""	"4.8"	""	"4.0"	""	"4.9"	"5.1"	""	"1424"	"41"	"38.000"	"31.000"	"0.00505219370789932"	"15"	"0"	"0.0001975"	"0.593"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.44165"	"2501.31040"	"2501.30448"	"2.37"	"0.00197"	"22/232"	"22"	"232"	"322334.614746094"	"HCD"	"MS2"	"0"	"2.8"	"100.000"	"103.1093"	"36845"	"36845"	"36825"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.5"	""	""	""	"4.7"	""	"6.4"	""	"5.5"	"6.8"	""	"1432"	"100"	"38.000"	"31.000"	"7.77880746509819E-09"	"19"	"0"	"7.396E-10"	"1.71"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTnGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.1860"	"0.0000"	"1"	"1"	"1"	"834.76703"	"2502.28653"	"2502.28849"	"-0.78"	"-0.00065"	"12/232"	"12"	"232"	"132405.883300781"	"HCD"	"MS2"	"5.449216"	"2.1"	"100.000"	"107.2716"	"38478"	"38478"	"38460"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.7"	""	"3.8"	""	"3.2"	""	""	""	"2.9"	"4.5"	""	"1442"	"43"	"38.000"	"31.000"	"0.00378386178840086"	"20"	"0"	"4.257E-05"	"0.73"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTqGLDGLSER.[C]"	"N-Term(TMT6plex); Q15(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"834.76807"	"2502.28965"	"2502.28849"	"0.46"	"0.00038"	"8/232"	"8"	"232"	"114619.712219238"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"107.5973"	"38623"	"38623"	"38612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.0"	""	""	""	""	""	"3.8"	""	"3.4"	"4.9"	""	"1456"	"13"	"38.000"	"31.000"	"3.80304425591359"	"13"	"0"	"0.0002325"	"0.578"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTnGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"2"	"2"	"834.76807"	"2502.28965"	"2502.28849"	"0.46"	"0.00038"	"8/232"	"8"	"232"	"114619.712219238"	"HCD"	"MS2"	"0"	"1.4"	"100.000"	"107.5973"	"38623"	"38623"	"38612"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"2.0"	""	""	""	""	""	"3.8"	""	"3.4"	"4.9"	""	"1456"	"13"	"38.000"	"31.000"	"3.80304425591359"	"13"	"9.9E-05"	"0.0004426"	"0.521"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTqGLDGLSER.[C]"	"N-Term(TMT6plex); Q15(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"1"	"1"	"834.76849"	"2502.29093"	"2502.28849"	"0.97"	"0.00081"	"6/232"	"6"	"232"	"60364.2615966797"	"HCD"	"MS2"	"4.101411"	"1.0"	"100.000"	"107.5639"	"38588"	"38588"	"38576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"2.3"	""	"2.0"	""	"2.0"	""	""	"2.9"	""	"1455"	"21"	"38.000"	"31.000"	"0.639488880994468"	"15"	"9.9E-05"	"0.0008548"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTnGETTTQGLDGLSER.[C]"	"N-Term(TMT6plex); N9(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.9524"	"0.0000"	"1"	"2"	"2"	"834.76849"	"2502.29093"	"2502.28849"	"0.97"	"0.00081"	"6/232"	"6"	"232"	"60364.2615966797"	"HCD"	"MS2"	"4.101411"	"1.0"	"100.000"	"107.5639"	"38588"	"38588"	"38576"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	""	""	"2.3"	""	"2.0"	""	"2.0"	""	""	"2.9"	""	"1455"	"21"	"38.000"	"31.000"	"0.639488880994468"	"15"	"9.9E-05"	"0.0008548"	"0.462"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GVVPLAGTNGETTTQGLDGLSER"	"[K].gVVPLAGTNGETTTqGLDGLSER.[C]"	"N-Term(TMT6plex); Q15(Deamidated)"	"1"	"1"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"P05065"	"Fructose-bisphosphate aldolase A OS=Rattus norvegicus OX=10116 GN=Aldoa PE=1 SV=2"	"0"	"3"	"3"	"0.2113"	"0.0000"	"1"	"1"	"1"	"834.77295"	"2502.30429"	"2502.28849"	"6.32"	"0.00527"	"19/232"	"19"	"232"	"387097.776977539"	"HCD"	"MS2"	"0"	"4.2"	"100.000"	"102.8318"	"36712"	"36712"	"36683"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.8"	""	"5.8"	""	"7.5"	""	"7.6"	""	"6.0"	"7.5"	""	"1443"	"71"	"38.000"	"31.000"	"5.51107517851303E-06"	"18"	"0"	"1.024E-08"	"1.475"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Selected"	"IEPGVDPDDTYNETPYEK"	"[K].iEPGVDPDDTYNETPYEk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"3"	"3"	"0.0000"	"0.0000"	"1"	"1"	"1"	"847.41901"	"2540.24247"	"2540.24445"	"-0.78"	"-0.00066"	"4/178"	"4"	"178"	"51992.0786743164"	"HCD"	"MS2"	"0"	"2.5"	"100.000"	"98.9243"	"35158"	"35158"	"35136"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.5"	""	"2.7"	""	"3.7"	""	"2.2"	""	"6.8"	"4.8"	""	"1153"	"6"	"37.000"	"30.000"	"13.5144791203194"	"18"	"0.002525"	"0.02385"	"0.163"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"IEPGVDPDDTYNETPYEK"	"[K].iEPGVDPDDTYNETPYEk.[G]"	"N-Term(TMT6plex); K18(TMT6plex)"	"1"	"1"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"O09175"	"Aminopeptidase B OS=Rattus norvegicus OX=10116 GN=Rnpep PE=1 SV=2"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"847.42041"	"2540.24668"	"2540.24445"	"0.88"	"0.00074"	"6/178"	"6"	"178"	"85112.6377563477"	"HCD"	"MS2"	"8.426511"	"3.2"	"100.000"	"98.8521"	"35099"	"35099"	"35078"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"5.6"	""	"6.4"	""	"4.0"	""	"5.3"	""	"5.0"	"3.9"	""	"1177"	"7"	"37.000"	"30.000"	"12.126807039594"	"13"	"0.002286"	"0.02173"	"0.171"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVPVVTQGSDAQALTQDDGVAK"	"[R].rVPVVTQGSDAQALTQDDGVAk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"905.16705"	"2713.48661"	"2713.48848"	"-0.69"	"-0.00062"	"13/234"	"13"	"234"	"221474.055358887"	"HCD"	"MS2"	"60.60811"	"8.6"	"100.000"	"80.0161"	"27501"	"27501"	"27478"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"26.7"	""	"6.9"	""	"9.3"	""	"14.0"	""	"14.7"	"9.7"	""	"1157"	"38"	"37.000"	"30.000"	"0.00851732782657328"	"15"	"0"	"8.58E-06"	"0.873"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"RVPVVTQGSDAQALTQDDGVAK"	"[R].rVPVVTQGSDAQALTQDDGVAk.[L]"	"N-Term(TMT6plex); K22(TMT6plex)"	"1"	"1"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"P01026"	"Complement C3 OS=Rattus norvegicus OX=10116 GN=C3 PE=1 SV=3"	"1"	"3"	"3"	"0.9787"	"0.0000"	"1"	"1"	"1"	"905.16760"	"2713.48825"	"2713.48848"	"-0.08"	"-0.00007"	"16/234"	"16"	"234"	"274961.172668457"	"HCD"	"MS2"	"4.214536"	"11.0"	"100.000"	"80.0963"	"27561"	"27561"	"27538"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"29.7"	""	"14.7"	""	"8.2"	""	"20.4"	""	"16.4"	"15.1"	""	"1136"	"47"	"37.000"	"30.000"	"0.00112291875558354"	"16"	"0"	"3.999E-07"	"1.147"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGDGYNGYGGGPGGGNFGGSPGYGGGR"	"[R].gFGDGYnGYGGGPGGGNFGGSPGYGGGR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"0.4333"	"0.0000"	"1"	"1"	"1"	"909.06732"	"2725.18741"	"2725.18649"	"0.34"	"0.00031"	"12/292"	"12"	"292"	"83523.6041259766"	"HCD"	"MS2"	"0"	"2.1"	"100.000"	"97.4883"	"34578"	"34578"	"34557"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	"3.6"	""	"3.4"	""	"2.5"	""	"2.6"	""	"5.2"	"2.6"	""	"299"	"30"	"31.000"	"24.000"	"0.013447488843874"	"16"	"0"	"2.557E-06"	"0.981"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"GFGDGYNGYGGGPGGGNFGGSPGYGGGR"	"[R].gFGDGYnGYGGGPGGGNFGGSPGYGGGR.[G]"	"N-Term(TMT6plex); N7(Deamidated)"	"1"	"1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"A7VJC2"	"Heterogeneous nuclear ribonucleoproteins A2/B1 OS=Rattus norvegicus OX=10116 GN=Hnrnpa2b1 PE=1 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"909.06952"	"2725.19400"	"2725.18649"	"2.76"	"0.00251"	"8/292"	"8"	"292"	"94252.8174438477"	"HCD"	"MS2"	"0"	"2.2"	"100.000"	"97.3911"	"34508"	"34508"	"34488"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"6.7"	""	"3.8"	""	""	""	"3.3"	""	"4.0"	"3.3"	""	"326"	"10"	"32.000"	"25.000"	"1.64508220430499"	"13"	"0"	"9.955E-06"	"0.86"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"SRPVILDPADPTGNVAGGNQEGWR"	"[K].sRPVILDPADPTGnVAGGNQEGWR.[R]"	"N-Term(TMT6plex); N14(Deamidated)"	"1"	"1"	"Q05961"	"2'-5'-oligoadenylate synthase 1A OS=Rattus norvegicus OX=10116 GN=Oas1a PE=2 SV=1"	"Q05961"	"2'-5'-oligoadenylate synthase 1A OS=Rattus norvegicus OX=10116 GN=Oas1a PE=2 SV=1"	"0"	"3"	"3"	"1.0000"	"0.0000"	"1"	"1"	"1"	"912.80554"	"2736.40207"	"2736.39027"	"4.31"	"0.00393"	"4/268"	"4"	"268"	"48276.9821166992"	"HCD"	"MS2"	"31.79832"	"0.7"	"100.000"	"92.9919"	"32762"	"32762"	"32739"	"20190226_COPD_TMTPOOLED_F3-01.raw"	"F5"	""	""	""	""	"2.0"	""	""	""	"3.1"	"2.3"	""	"1460"	"1"	"38.000"	"31.000"	"54.3654340951372"	"13"	"0.008683"	"0.1099"	"0.019"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"QLNISTLVKDTVMQQLLTTR"	"[K].qLnISTLVkDTVMqqLLTTR.[R]"	"N-Term(TMT6plex); Q1(Deamidated); N3(Deamidated); K9(TMT6plex); Q14(Deamidated); Q15(Deamidated)"	"1"	"1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"Q9WV78"	"Plasmalemma vesicle-associated protein OS=Rattus norvegicus OX=10116 GN=Plvap PE=1 SV=1"	"1"	"6"	"6"	"0.5000"	"0.0000"	"1"	"1"	"5"	"461.59067"	"2764.50762"	"2764.54182"	"-12.37"	"-0.00570"	"6/218"	"6"	"218"	"4275221.40893555"	"HCD"	"MS2"	"22.33926"	"99.4"	"100.000"	"44.3314"	"13021"	"13021"	"12993"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"109.5"	""	"107.8"	""	"124.6"	""	"175.5"	"1.7"	"230.4"	"195.5"	""	"1284"	"4"	"38.000"	"31.000"	"24.520822187931"	"15"	"0.008967"	"0.1163"	"0.014"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWRQKRPLVQKPLLIQPSPSVQPVFNPGK"	"[K].AWRQKRPLVqKPLLIQPSPSVQPVFNPGk.[M]"	"Q10(Deamidated); K29(TMT6plex)"	"1"	"1"	"Q535K8"	"GON-4-like protein OS=Rattus norvegicus OX=10116 GN=Gon4l PE=1 SV=1"	"Q535K8"	"GON-4-like protein OS=Rattus norvegicus OX=10116 GN=Gon4l PE=1 SV=1"	"2"	"6"	"6"	"0.6667"	"0.0000"	"1"	"1"	"1"	"590.68011"	"3539.04431"	"3539.05758"	"-3.75"	"-0.00221"	"5/280"	"5"	"280"	"2367381.22290039"	"HCD"	"MS2"	"17.96141"	"61.3"	"100.000"	"49.8432"	"15255"	"15255"	"15234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.4"	""	"88.6"	""	"72.7"	""	"90.4"	""	"122.5"	"114.5"	""	"256"	"3"	"31.000"	"24.000"	"7.1319775863287"	"13"	"0.002834"	"0.03063"	"0.14"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"AWRQKRPLVQKPLLIQPSPSVQPVFNPGK"	"[K].AWRqKRPLVQKPLLIQPSPSVQPVFNPGk.[M]"	"Q4(Deamidated); K29(TMT6plex)"	"1"	"1"	"Q535K8"	"GON-4-like protein OS=Rattus norvegicus OX=10116 GN=Gon4l PE=1 SV=1"	"Q535K8"	"GON-4-like protein OS=Rattus norvegicus OX=10116 GN=Gon4l PE=1 SV=1"	"2"	"6"	"6"	"0.6667"	"0.0000"	"1"	"2"	"2"	"590.68011"	"3539.04431"	"3539.05758"	"-3.75"	"-0.00221"	"5/280"	"5"	"280"	"2367381.22290039"	"HCD"	"MS2"	"17.96141"	"61.3"	"100.000"	"49.8432"	"15255"	"15255"	"15234"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"96.4"	""	"88.6"	""	"72.7"	""	"90.4"	""	"122.5"	"114.5"	""	"256"	"3"	"31.000"	"24.000"	"7.1319775863287"	"13"	"0.004852"	"0.05968"	"0.078"
"False"	"High"	"Mascot"	"Mascot (A2)"	"A"	"2"	"Unambiguous"	"EHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQR"	"[R].eHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQR.[A]"	"N-Term(TMT6plex)"	"1"	"1"	"Q01750"	"General transcription factor IIF subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2f2 PE=1 SV=1"	"Q01750"	"General transcription factor IIF subunit 2 OS=Rattus norvegicus OX=10116 GN=Gtf2f2 PE=1 SV=1"	"1"	"6"	"6"	""	"0.0000"	"1"	"1"	"1"	"653.68756"	"3917.08898"	"3917.08576"	"0.82"	"0.00054"	"6/372"	"6"	"372"	"1786528.13696289"	"HCD"	"MS2"	"2.262841"	"42.6"	"100.000"	"67.0193"	"22228"	"22228"	"22208"	"20190226_COPD_TMTPOOLED_F3-02.raw"	"F6"	"65.2"	""	"42.8"	""	"47.8"	""	"78.5"	"0.2"	"84.4"	"85.1"	""	"1211"	"0"	"37.000"	"30.000"	"57.824801083598"	"13"	"0.003357"	"0.03765"	"0.121"